BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780741|ref|YP_003065154.1| carboxynorspermidine
decarboxylase [Candidatus Liberibacter asiaticus str. psy62]
         (367 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done



>gi|15616520|ref|NP_244826.1| carboxynorspermidine decarboxylase [Bacillus halodurans C-125]
 gi|10176583|dbj|BAB07677.1| carboxynorspermidine decarboxylase [Bacillus halodurans C-125]
          Length = 379

 Score =  298 bits (764), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 146/370 (39%), Positives = 217/370 (58%), Gaps = 6/370 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y++D+  +  N+     I K  G K++LA K F+   M+  + +Y+ GTT+S LY
Sbjct: 10  LPTPCYVVDEALVEKNVKILNGIMKRTGAKIVLAQKAFSMSTMYPLIGKYLTGTTASGLY 69

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LGHE+ G E H +  AY++ EID ++S CD IIFN+ SQL KFK +A     K+GLR
Sbjct: 70  EARLGHEEMGKENHIFAPAYREDEIDEIVSICDHIIFNSFSQLEKFKQRALDAGSKVGLR 129

Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           INP  S      + DP  P SR G K +D  +  +  V+GL FH  C+  S       L 
Sbjct: 130 INPECSTQVGHEIYDPCSPGSRFGVKQEDVRQELLDGVSGLHFHTLCQQNSDD-LETTLD 188

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++FG ++ Q+EWI+ GGG H T  DY +      +K   +KY +++YLEPGEAI  N
Sbjct: 189 AVEEKFGQWLPQMEWINFGGGHHITRDDYDIPRLEACIKRMQDKYGLEVYLEPGEAIALN 248

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGRS 296
              L TTVLD+ +N  ++ I+D+S   H+PD L       +     P   P+T  + G +
Sbjct: 249 AGYLVTTVLDLHKNGIDIAILDTSATCHMPDVLEMPYRPPLFGSGEPGEKPFTYRLGGPT 308

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CL GD+ G++ F++P+K GDR+ F D+A Y++ + N FNG+ +P IA K+ DG  + +R+
Sbjct: 309 CLTGDVIGDYSFDQPLKSGDRLVFGDMAIYSMVKTNTFNGMPLPAIATKHQDGDCQVVRQ 368

Query: 357 FSYNDYYNNL 366
           F Y D+   L
Sbjct: 369 FGYQDFKTRL 378


>gi|160932661|ref|ZP_02080051.1| hypothetical protein CLOLEP_01503 [Clostridium leptum DSM 753]
 gi|156868620|gb|EDO61992.1| hypothetical protein CLOLEP_01503 [Clostridium leptum DSM 753]
          Length = 376

 Score =  298 bits (764), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 138/370 (37%), Positives = 210/370 (56%), Gaps = 5/370 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TP Y++D+  L  NL     +    G K+LLA K F+ +  +  +  Y++GTT+S L+
Sbjct: 8   LQTPCYVVDEALLERNLVILKQVIDRTGCKILLAQKAFSMFACYPLIGSYLNGTTASGLF 67

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LG E+ GGETH ++ AY++ EID +LS CD +IFN+ SQ  K+K K     K  GLR
Sbjct: 68  EARLGKEEMGGETHIFSPAYREDEIDEILSLCDHVIFNSFSQWEKYKAKVLASGKSAGLR 127

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP  S     + DP  P SRLG   K      +  + GL FH  CE          +  
Sbjct: 128 LNPEHSTQDHAIYDPCSPGSRLGITLKKFRPDLLDGIEGLHFHTLCEQD-AAPLVETVAV 186

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           +E++FG +++Q++W++ GGG H T   Y +      +    E+Y VQ+YLEPGEA+  N 
Sbjct: 187 VEEKFGPWLSQMKWLNFGGGHHITRPGYDIDALVSCVSRVQERYGVQVYLEPGEAVALNA 246

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRSC 297
             L +TVLD+ EN  N+ ++D+S   H+PD L       I          Y   + G +C
Sbjct: 247 GFLVSTVLDVLENSGNIAVLDTSAACHMPDVLEMPYRPPIAGGGGLGEKAYDYRLGGPTC 306

Query: 298 LAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF 357
           LAGD+ G++ F++P+  G R+ F D+A Y++ + N FNG+N+P I +K  DG+I+ +R+F
Sbjct: 307 LAGDVIGDYSFDEPLSPGSRVVFCDMAIYSMVKNNTFNGMNLPAIYLKKQDGSIQLVRKF 366

Query: 358 SYNDYYNNLS 367
            Y D+   LS
Sbjct: 367 GYEDFKTRLS 376


>gi|229542370|ref|ZP_04431430.1| carboxynorspermidine decarboxylase [Bacillus coagulans 36D1]
 gi|229326790|gb|EEN92465.1| carboxynorspermidine decarboxylase [Bacillus coagulans 36D1]
          Length = 375

 Score =  297 bits (761), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 146/370 (39%), Positives = 219/370 (59%), Gaps = 6/370 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+ID+QKL +NL     + K  G K++LA K F+ + ++  + +Y+ GTT+S LY
Sbjct: 6   LPTPCYVIDEQKLEDNLKVLNGVMKRTGCKIVLAQKAFSMFALYPLIGKYLSGTTASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LGHE+ G E H ++ AY++ EID ++S CD IIFN+ SQL KFK +     KK+GLR
Sbjct: 66  EARLGHEEMGKENHIFSAAYREGEIDEIVSICDHIIFNSFSQLEKFKGRVLAGGKKVGLR 125

Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           INP  S      + DP  P SR G        + +  V GL FH  C+  +       L 
Sbjct: 126 INPECSTQTGHAIYDPCSPGSRFGVTQAQFRPALLDGVTGLHFHTLCQQNADD-LETTLD 184

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++FG ++ Q+EWI+ GGG H T +DY +    + +K   +KY +++YLEPGEA+  N
Sbjct: 185 AVEEKFGEWLPQMEWINFGGGHHITREDYDIPLLEKCIKRMQDKYGLEVYLEPGEAVALN 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296
              L TTVLD  +N  ++ I+D+S   H+PD L       +     P   PYT  + G++
Sbjct: 245 AGYLVTTVLDTVKNGMDIAILDTSASCHMPDVLEMPYRPPLIGAGEPGEKPYTYRLGGQT 304

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CLAGD  G++ F+KP+K GDR+ F+D+A Y + +   FNG+ +P IA++  +G    +RE
Sbjct: 305 CLAGDTIGDYSFDKPLKEGDRLVFDDMAIYTMVKNTTFNGMPLPAIAIQYKNGDCTIVRE 364

Query: 357 FSYNDYYNNL 366
           F Y+D+   L
Sbjct: 365 FGYHDFKMRL 374


>gi|154497992|ref|ZP_02036370.1| hypothetical protein BACCAP_01972 [Bacteroides capillosus ATCC
           29799]
 gi|150272982|gb|EDN00139.1| hypothetical protein BACCAP_01972 [Bacteroides capillosus ATCC
           29799]
          Length = 373

 Score =  295 bits (755), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 131/371 (35%), Positives = 217/371 (58%), Gaps = 6/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TPY+L+D+++L++NL+    + + +G ++LLA K F+ +  +  L QY+ G+T+S LY
Sbjct: 4   LRTPYFLVDEERLVHNLEILKDVAERSGARILLAQKAFSMFACYPLLAQYLSGSTASGLY 63

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LG E F GE H ++ AY++ E +A+L   D  +FN+  QL K+  +A+   K++GLR
Sbjct: 64  EARLGKEHFPGEVHVFSPAYREDEFEALLEFADHFVFNSPRQLEKYALRARDAGKQVGLR 123

Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +NP  S      + DP    SRLG    +    ++  ++GL FH  CE  S       L 
Sbjct: 124 VNPECSTQEGHAIYDPCSHGSRLGTTLANFKPEQLSLLDGLHFHTLCEQNSDD-LETTLD 182

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
             E +FG ++  ++W++LGGG H T  DY  +     ++   ++Y+V++YLEPGEA+V N
Sbjct: 183 AFEAKFGPYLKGLKWLNLGGGHHITRADYDRERLIGLVRRLKDRYNVEVYLEPGEAVVLN 242

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----TGPYTAMVCGRS 296
              L T+VL+   N  ++ I+D+S   H+PD L       +  +       YT  + G +
Sbjct: 243 AGFLVTSVLETLHNGMDIAILDTSAACHMPDVLEMPYRPPLQNSGQPGEKAYTYRLGGPT 302

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CLAGDI G++ F+ P++ GD + FED+A Y + + N FNG+ +P+I  ++ DG  + +R+
Sbjct: 303 CLAGDIIGDYSFDNPLQEGDTLVFEDMALYTMVKTNTFNGMPLPSIVWRDRDGNQRVVRQ 362

Query: 357 FSYNDYYNNLS 367
           F Y D+   LS
Sbjct: 363 FGYEDFKGRLS 373


>gi|317127307|ref|YP_004093589.1| carboxynorspermidine decarboxylase [Bacillus cellulosilyticus DSM
           2522]
 gi|315472255|gb|ADU28858.1| carboxynorspermidine decarboxylase [Bacillus cellulosilyticus DSM
           2522]
          Length = 375

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 141/370 (38%), Positives = 217/370 (58%), Gaps = 6/370 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y++D+  +  NL     +    G K++LA K F+   M+  + +Y++GTT+S L+
Sbjct: 6   LPTPCYVVDEALVEKNLKILNGVMARTGCKIVLAQKAFSMTAMYPLIGEYLNGTTASGLF 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LGHE+ G E H +  AY+D EID ++S CD IIFN+ SQL+KFKDKA +  KK+GLR
Sbjct: 66  EARLGHEEMGKENHVFAPAYRDDEIDEIISICDHIIFNSFSQLDKFKDKALQAGKKVGLR 125

Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           INP  S      + DP    SR G   K      +  V+GL FH  C+  S       L 
Sbjct: 126 INPECSTQVGHEIYDPCASGSRFGVTKKHFRPDLLDGVSGLHFHTLCQQNSDD-LETTLH 184

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++FG ++ Q+EWI+ GGG H T +DY +    + +K   E Y + +YLEPGEA+  +
Sbjct: 185 AVEEKFGEWLPQMEWINFGGGHHITREDYDIPLLEKCIKRMQENYGLSVYLEPGEAVALD 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----TGPYTAMVCGRS 296
              + TTVLD  +N  ++ I+D+S   H+PD L       ++ +      P+T  + G++
Sbjct: 245 AGYMITTVLDTHQNGMDIAILDTSASCHMPDVLEMPYRPPLFNSGETGEKPFTYRLGGQT 304

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CLAGD+ G++ F+KP++ GDR+ F D+A Y++ +   FNG+ +P IA+K  DG    +++
Sbjct: 305 CLAGDVIGDYSFDKPLQSGDRLVFGDMAIYSMVKNTTFNGMPLPAIAIKAKDGDCHIVQQ 364

Query: 357 FSYNDYYNNL 366
           F Y D+   L
Sbjct: 365 FGYQDFKMRL 374


>gi|323140845|ref|ZP_08075758.1| carboxynorspermidine decarboxylase [Phascolarctobacterium sp. YIT
           12067]
 gi|322414583|gb|EFY05389.1| carboxynorspermidine decarboxylase [Phascolarctobacterium sp. YIT
           12067]
          Length = 412

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 131/372 (35%), Positives = 209/372 (56%), Gaps = 7/372 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y++D+ KLLNNL    +++  +G  +LLA KCF+ + ++  + +Y+ GTT+S +Y
Sbjct: 42  LPTPCYVVDEAKLLNNLRLLQHVQCESGAHILLAQKCFSMFRLYPLMGEYLAGTTASGIY 101

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LGHE+ G E H +  A+K+ ++  ++  CD IIFN+ +Q  K K    +    +G+R
Sbjct: 102 EARLGHEEMGKENHVFAPAFKEQDMQELVQICDHIIFNSFAQFEKHKAVCAQAGVSVGIR 161

Query: 122 INPSVSYSK--FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +NP  S  +    + DP    SRLG    +  +     + GL FH  CE  +        
Sbjct: 162 VNPECSTQEGEHAIYDPCAYGSRLGVTLANFPQVLPPEIEGLHFHTLCEQNADD-LLTTW 220

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
           K  E +F  +  Q++W++LGGG H T  DY V+     +K     Y V++YLEPGEA+  
Sbjct: 221 KAFEAKFSKYFAQLKWLNLGGGHHITRSDYDVEALIDLVKYIRATYHVEVYLEPGEAVAL 280

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGR 295
           N   L + VLDI  N  +++I+D+S   H+PD L      T+      +   Y   +   
Sbjct: 281 NAGYLVSEVLDIVHNGLDILILDASAACHMPDVLEMPYRPTLRDGYEADEKQYKYRLSSM 340

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           +CLAGD+ G++ F+K +K+GD++ FED+A Y++ + N FNGI +P I + + DGT + +R
Sbjct: 341 TCLAGDVIGDYSFDKEIKVGDKLIFEDMAIYSMVKNNTFNGIPLPDIVLLHKDGTTELVR 400

Query: 356 EFSYNDYYNNLS 367
            F Y D+   LS
Sbjct: 401 RFGYEDFKGRLS 412


>gi|225018468|ref|ZP_03707660.1| hypothetical protein CLOSTMETH_02415 [Clostridium methylpentosum
           DSM 5476]
 gi|224948777|gb|EEG29986.1| hypothetical protein CLOSTMETH_02415 [Clostridium methylpentosum
           DSM 5476]
          Length = 378

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 134/369 (36%), Positives = 220/369 (59%), Gaps = 5/369 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TPYY +D+  L+ NL+    +++  G ++LLA K F+ + ++  + +Y+DGTT+S L+
Sbjct: 11  LPTPYYAVDRNLLIRNLELLRSVKERTGCRILLAQKAFSMYSLYPLIGEYLDGTTASGLF 70

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LG E+ G E H ++ AY++ E + +LS C  I+FN+  Q +K++ +A    K+ G+R
Sbjct: 71  EARLGFEEMGKENHIFSPAYREEEFEEILSLCGHIVFNSFEQWDKYRKRALAAGKQCGIR 130

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP  S     + DP  P SRLG    +     +  ++GL FH  CE          L  
Sbjct: 131 INPECSTQDHAIYDPCSPGSRLGVTIDNFRPDLLDGISGLHFHTLCEQN-ADALERTLDA 189

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           +E++FG +++Q+ W++ GGG H T  DY V+   + ++   + Y +++YLEPGEA+  NT
Sbjct: 190 VEEKFGPYLSQMNWLNFGGGHHITRADYNVEKLIRCIQRMQQTYQLEVYLEPGEAVALNT 249

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRSC 297
             L +TVL+I  N  ++ I+D+S   H+PD L       I      +  PYT  + G +C
Sbjct: 250 GFLVSTVLEIGRNGIDIAILDTSAACHMPDVLEMPYRPEIIGAGNLDEKPYTYRLGGPTC 309

Query: 298 LAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF 357
           LAGDI G++ F++P+K+GDR+ F D+A Y++ + N FNGIN+P+IAV   +  ++ +R F
Sbjct: 310 LAGDIIGDYSFDRPLKVGDRLVFCDMAHYSMVKNNTFNGINLPSIAVTGANNQLELVRSF 369

Query: 358 SYNDYYNNL 366
            Y D+ + L
Sbjct: 370 GYQDFKSRL 378


>gi|218782485|ref|YP_002433803.1| carboxynorspermidine decarboxylase [Desulfatibacillum alkenivorans
           AK-01]
 gi|218763869|gb|ACL06335.1| carboxynorspermidine decarboxylase [Desulfatibacillum alkenivorans
           AK-01]
          Length = 376

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 155/369 (42%), Positives = 222/369 (60%), Gaps = 5/369 (1%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP Y++D+  L NNL     ++K AGVK+LLALK FA +G+F  + QY+ G T+SSL E
Sbjct: 9   QTPCYVVDEALLENNLRILDRVQKQAGVKILLALKGFAMFGVFPLIRQYLPGVTASSLNE 68

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
             LG E+FGGE H    AY++ E   +L  C  ++FN+ SQ +K+   A K   + GLRI
Sbjct: 69  ARLGREEFGGEVHLCAPAYREEEFGQLLDCCGHVVFNSFSQKDKYLAAALKKGVRCGLRI 128

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           NP     +  + DP  P SRLG   ++  + +++ + GL FHN CE K     +  LK +
Sbjct: 129 NPEHREVETAIYDPCGPCSRLGVALENFQDGDLEGITGLHFHNLCE-KGADALARTLKVV 187

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTT 242
           E++FG +I+ +EWI++GGG H T  DY V+  C  LK F EKY V+IYLEPGEA+  NT 
Sbjct: 188 EEKFGRYISSMEWINMGGGHHITRGDYDVELLCSTLKAFKEKYGVEIYLEPGEAVALNTG 247

Query: 243 TLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----YTAMVCGRSCL 298
            L  +VLD+  N   + I+D+S   H+PD L       +     P     T  + G SCL
Sbjct: 248 VLVASVLDVVHNQMPIAILDASAATHMPDVLEMPYRPEVEGAGAPGELAVTYRLAGPSCL 307

Query: 299 AGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFS 358
           AGD+ G++ F   ++ GD++ F D+A Y + + N FNGIN+P+IAV+   G I+ +R F+
Sbjct: 308 AGDVIGDYSFAAELRPGDQLVFHDMAHYTMVKNNTFNGINLPSIAVRKKTGEIEVLRAFT 367

Query: 359 YNDYYNNLS 367
           Y DY N LS
Sbjct: 368 YQDYKNRLS 376


>gi|210613857|ref|ZP_03289951.1| hypothetical protein CLONEX_02164 [Clostridium nexile DSM 1787]
 gi|210150948|gb|EEA81956.1| hypothetical protein CLONEX_02164 [Clostridium nexile DSM 1787]
          Length = 378

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 135/374 (36%), Positives = 213/374 (56%), Gaps = 10/374 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+I +++L  NL+    +    G K+LLA K F+ + ++  + QY+ GTT+S LY
Sbjct: 6   LPTPCYVIQEEQLRQNLEILKGVMDRTGCKILLAQKAFSMYEVYPLIAQYLSGTTASGLY 65

Query: 62  EVMLGHEK----FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
           E  LG E+    FG ETH ++ AYK+ E D +L+ CD I+FN+  QL +F  +A +  K 
Sbjct: 66  EARLGAEEMGIPFGKETHIFSPAYKEEEFDEILTYCDHIVFNSFEQLERFGKRAAEAGKS 125

Query: 118 IGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
           +GLRINP  S      + DP    SRLG   +      ++ V+GL FH  CE        
Sbjct: 126 VGLRINPQYSTQEGHEIYDPCATGSRLGVTIEKFRPELLEYVDGLHFHALCEQD-AQPLH 184

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
             LK +E++FG ++ +++W++ GGG H T + Y +    + + +  EKY ++I+LEPGEA
Sbjct: 185 DTLKEVERQFGEWLPKMKWLNFGGGHHITREGYDIALLERCICDMKEKYDLEIFLEPGEA 244

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMV 292
           +  N   L T V +I EN   + I+D+S   H+PD L       +          YT  +
Sbjct: 245 VALNAGVLLTKVEEIVENSIQIAILDTSAACHMPDVLEMPYRPPLQDGYEAEEKAYTYRL 304

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352
            G +CLAGD+ G++ F +P+K GD ++FED+A Y + + N FNG+ +P I +++ DG  +
Sbjct: 305 AGPTCLAGDVIGDYSFAEPLKRGDTLTFEDMAIYTMVKNNTFNGMRLPAIVLEDKDGECR 364

Query: 353 AIREFSYNDYYNNL 366
            +R+F Y D+   L
Sbjct: 365 VVRQFGYEDFKMRL 378


>gi|220928558|ref|YP_002505467.1| carboxynorspermidine decarboxylase [Clostridium cellulolyticum H10]
 gi|219998886|gb|ACL75487.1| carboxynorspermidine decarboxylase [Clostridium cellulolyticum H10]
          Length = 382

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 142/372 (38%), Positives = 214/372 (57%), Gaps = 7/372 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y++D++ L+ NL+    ++K  G K+LLA K F+   ++  + +Y+ G TSSSL+
Sbjct: 12  LPTPCYIVDERLLIKNLEILDSVQKRTGCKILLAQKGFSMHSVYPLVGKYLAGVTSSSLF 71

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKIG 119
           E  LG+EK G E H Y  AY + E D ++   D I+FN+  Q NK+KDK +        G
Sbjct: 72  EAKLGYEKMGKEVHIYAPAYIEEEFDEIMKYSDHIVFNSFHQWNKYKDKVRTSTKKISFG 131

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +RINP  S  +  + DP   FSRLG    +     +  + GL FH  CE  S       +
Sbjct: 132 IRINPEYSELEHPIYDPCYKFSRLGVTLPNFKPEGLDGIEGLHFHTMCEQNS-DTLERTI 190

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
           K ++++FG +I  ++W++ GGG H T  DY ++   + +  F +KY V +YLEPGEA+  
Sbjct: 191 KVVDEKFGRYIKDMKWLNFGGGHHITRPDYDMEALVRSINYFQDKYGVSVYLEPGEAVAL 250

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGR 295
           NT  L   VLDI EN  N+ I+D+S   H+PD +       I     P+  P+T  + G 
Sbjct: 251 NTGYLVAKVLDIVENEMNIAILDTSAACHMPDVIEMPYRPNIIGAGKPDENPHTYRLGGH 310

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           +CLAGDI G++ F + +K GDR+ F D+A Y + + N FNG+N+P IA+ N    I+ I+
Sbjct: 311 TCLAGDIIGDYSFVQNLKPGDRLVFCDMAHYTMVKNNTFNGVNLPAIALYNEKEGIRIIK 370

Query: 356 EFSYNDYYNNLS 367
           +F Y D+ N LS
Sbjct: 371 QFGYEDFENRLS 382


>gi|78222123|ref|YP_383870.1| carboxynorspermidine decarboxylase [Geobacter metallireducens
           GS-15]
 gi|78193378|gb|ABB31145.1| carboxynorspermidine decarboxylase [Geobacter metallireducens
           GS-15]
          Length = 384

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 131/372 (35%), Positives = 202/372 (54%), Gaps = 8/372 (2%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y++D  +L +NL     ++K +G K+L+ALK FA W +F  + + + G  +SS +E
Sbjct: 14  PSPAYVVDLGRLRHNLAILDDVQKRSGAKILMALKAFAMWSVFPIIRETLQGVCASSPWE 73

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IGL 120
             LG E+FG E H++  A+K+ ++  +L+  + ++FN+ +QL +F+   +K   +  +GL
Sbjct: 74  ARLGREEFGREVHSFAAAFKESDVVELLAVSNHLVFNSFNQLERFRPLWEKERGRVSVGL 133

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP  S     + DP  P SRLG          +  V GL FH  CE   F       K
Sbjct: 134 RVNPEHSEGHTPIYDPCAPKSRLGIPRAAFEGKSLAGVEGLHFHTLCEQL-FEPLERTAK 192

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
             E++FG  +  ++W++LGGG H T   Y +    + +K F  KY V++YLEPGEAI   
Sbjct: 193 VFEEKFGPLLHGMKWLNLGGGHHITRAGYDIDALVELVKYFKGKYGVEVYLEPGEAIAIG 252

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296
           T  L   VLD+  N   + I+D S   H+PD L       I     P    +T  + G S
Sbjct: 253 TGVLVGEVLDVVRNEMEIAILDVSATCHMPDVLEMPYRPGITGGFDPGEKAHTYRLAGPS 312

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTIKAIR 355
           CLAGD+ G++ F+KP+K GDR+ FED++ Y + +   FNGI  P I       G ++ +R
Sbjct: 313 CLAGDVIGDWSFDKPLKPGDRLVFEDMSHYTMVKTTTFNGIQHPAICTFEPETGELRVVR 372

Query: 356 EFSYNDYYNNLS 367
            F Y D+ + LS
Sbjct: 373 RFGYEDFKSRLS 384


>gi|253573955|ref|ZP_04851297.1| carboxynorspermidine decarboxylase [Paenibacillus sp. oral taxon
           786 str. D14]
 gi|251846432|gb|EES74438.1| carboxynorspermidine decarboxylase [Paenibacillus sp. oral taxon
           786 str. D14]
          Length = 375

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 129/370 (34%), Positives = 209/370 (56%), Gaps = 6/370 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y++D++ L  NL     I +  G K++LA K F+ +  +  + +Y+ GT +S LY
Sbjct: 6   LPTPCYVVDEKLLEQNLKILAGIMERTGAKIILAQKAFSMYTTYPLIGKYLSGTAASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LG E  G E H +  AY++ +ID ++  CD +IFN+ SQ+ K++D+     KK+GLR
Sbjct: 66  EARLGREAMGKENHVFAPAYREDQIDEIIELCDHVIFNSFSQVEKYRDRVLAAGKKVGLR 125

Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           INP  S      + +P    SR G   +      +  ++G  FH  C+  S       L 
Sbjct: 126 INPECSTQVGHDIYNPCAYGSRFGVTIEHFRPELLDGISGFHFHTLCQQNSDD-LVTTLD 184

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++FG +++Q+EWI+ GGG H T +DY +      ++   +KY +++YLEPGEA+  N
Sbjct: 185 AVEEKFGPWLSQMEWINFGGGHHITREDYDIPLLEACIRRMQDKYGLEVYLEPGEAVALN 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGRS 296
              L TTVLD  +N  ++ IVD+S   H+PD L       +     P   PYT  + G +
Sbjct: 245 AGYLITTVLDTMKNGLDIAIVDASASCHMPDVLEMPYRPPLFGSGEPGEKPYTYRLGGPT 304

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CL+GD  G++ F++P+K GDR+ F D+A Y++ +   FNG+ +P + +++ DG  + + E
Sbjct: 305 CLSGDNIGDYSFDEPLKPGDRLVFGDMAIYSMVKNTTFNGMPLPALVLQHKDGDCEILHE 364

Query: 357 FSYNDYYNNL 366
           F Y D+   L
Sbjct: 365 FGYEDFKMRL 374


>gi|307635049|gb|ADI85295.2| carboxynorspermidine/carboxyspermidine decarboxylase [Geobacter
           sulfurreducens KN400]
          Length = 384

 Score =  288 bits (737), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 130/372 (34%), Positives = 208/372 (55%), Gaps = 8/372 (2%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y++D  +L +NL     +++ +G K+L+ALK FA W +F  + + + G  +SS +E
Sbjct: 14  PSPAYVVDLGRLRHNLAILDQVQRRSGAKILMALKAFAMWSVFPIIRETLHGVCASSPWE 73

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IGL 120
             LG E+FG E H++  A+K+ ++  +L   + ++FN+ +QL +F+   +K   +  +GL
Sbjct: 74  ARLGREEFGREVHSFAAAFKESDVVELLQTSNHLVFNSFNQLERFRPLWEKERGRVSVGL 133

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP  S     + DP  P SRLG   ++     ++ V GL FH  CE   F   +   K
Sbjct: 134 RVNPEHSEGHTPIYDPCAPASRLGIPRREFDGRSLEGVEGLHFHTLCEQL-FEPLARTAK 192

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
             E++FG F+  ++W++LGGG H T + Y +    + +  F  KY V++YLEPGEAI   
Sbjct: 193 VFEEKFGPFLHGMKWLNLGGGHHITREGYDIDALVELITYFKRKYGVEVYLEPGEAIAIG 252

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296
           T  L   VLD+  N  ++ I+D S   H+PD L       I     P    +T  + G S
Sbjct: 253 TGILVGEVLDVVHNEMDIAILDVSATCHMPDVLEMPYRPGITAGFDPGEKAHTYRLAGPS 312

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTIKAIR 355
           CLAGD+ G++ F+KP+K GDR+ FED++ Y + +   FNGI  P I       G ++ +R
Sbjct: 313 CLAGDVIGDWSFDKPLKPGDRLVFEDMSHYTMVKTTTFNGIQHPAICTFEPETGELRVVR 372

Query: 356 EFSYNDYYNNLS 367
           +F Y D+ + LS
Sbjct: 373 KFGYEDFRSRLS 384


>gi|317131719|ref|YP_004091033.1| carboxynorspermidine decarboxylase [Ethanoligenens harbinense
           YUAN-3]
 gi|315469698|gb|ADU26302.1| carboxynorspermidine decarboxylase [Ethanoligenens harbinense
           YUAN-3]
          Length = 375

 Score =  288 bits (737), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 139/371 (37%), Positives = 216/371 (58%), Gaps = 6/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y++D+  L+ NLD    +    G ++LLA K F+ + ++  + QY+ GT +S LY
Sbjct: 6   LSTPCYVVDESLLVRNLDILRGVMDRTGCRILLAQKAFSMYALYPLIGQYLSGTAASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LG E+   E H ++  Y++ + D ++S CD IIFN+ SQL KFK++A +  K +GLR
Sbjct: 66  EARLGREEMDKENHVFSPGYRNEDFDEIVSLCDHIIFNSFSQLEKFKNRALRAGKSVGLR 125

Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           INP+ S      L DP  P SRLG   ++     +  V GL FH  CE          ++
Sbjct: 126 INPAYSTQEGHELYDPCAPGSRLGVTRENFRPDRLDGVEGLHFHTLCEQD-AAPLVRTVE 184

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++FG ++ +++W++ GGG H T + Y +      +    E Y VQ+YLEPGEA+  N
Sbjct: 185 AVEEQFGPWLPRMKWLNFGGGHHITREGYDLAALEACIHRVQETYGVQVYLEPGEAVALN 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296
              L TTVLD   N  ++ I+D+S   H+PD L       +     P+  PYT  + G +
Sbjct: 245 AGFLVTTVLDTFRNGIDIAILDTSAACHMPDVLEMPYRPPLLGAGIPDEKPYTYRLGGPT 304

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CLAGD+ G++ F++P+  GDR++F D+A Y++ + N FNG+ +P+IA++N DG  K +  
Sbjct: 305 CLAGDVIGDYSFDRPLAPGDRLTFGDMAIYSMVKNNTFNGMPLPSIALRNADGDCKLLHR 364

Query: 357 FSYNDYYNNLS 367
           F YND+   LS
Sbjct: 365 FGYNDFKCRLS 375


>gi|89896566|ref|YP_520053.1| hypothetical protein DSY3820 [Desulfitobacterium hafniense Y51]
 gi|219667607|ref|YP_002458042.1| carboxynorspermidine decarboxylase [Desulfitobacterium hafniense
           DCB-2]
 gi|89336014|dbj|BAE85609.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219537867|gb|ACL19606.1| carboxynorspermidine decarboxylase [Desulfitobacterium hafniense
           DCB-2]
          Length = 376

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 141/372 (37%), Positives = 208/372 (55%), Gaps = 7/372 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y++D+  L  NL+    +++  G K+LLALK F+   +F  + QY+ G  +SSL+
Sbjct: 6   LPTPSYVVDENLLRRNLEILQSVQERTGCKILLALKGFSMHAVFPLVGQYLKGIAASSLF 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IG 119
           E  LG  + G E H Y+ AY + E D +L  CD ++FN+  Q  KFKDK +        G
Sbjct: 66  EARLGVAEMGKEVHVYSPAYIEEEFDELLGYCDHMVFNSFDQWRKFKDKVKNHPGHIECG 125

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +R+NP  S     + +P    SRLG    +    E++ + GL FH  CE  S       L
Sbjct: 126 IRVNPEYSEIATDIYNPCYQNSRLGVTLANFRPEELEGIAGLHFHTLCEQNS-DTLERTL 184

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
           K +E++FG  + +++W++LGGG H T  DY ++   + +    EKY V+IYLEPGEAI  
Sbjct: 185 KVVEEKFGEHLRKMKWLNLGGGHHITRPDYDIETLVRCILHLQEKYGVEIYLEPGEAIAL 244

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----TGPYTAMVCGR 295
           NT  L T VLDI +N   + ++D+S   H+PD L       I         PYT  + G 
Sbjct: 245 NTGFLVTKVLDIVDNGMKIALLDASAACHMPDVLEMPYRPAIINGGEPGEHPYTYRLGGN 304

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           +CLAGD+ G++ F +P+K GD++ F D+A Y + + N FNG+N+P I + N     K IR
Sbjct: 305 TCLAGDVIGDYSFAEPLKPGDKLIFCDMAHYTMVKNNMFNGVNLPNIMLYNEKEGFKLIR 364

Query: 356 EFSYNDYYNNLS 367
            F Y D+ N LS
Sbjct: 365 RFGYEDFKNRLS 376


>gi|303239157|ref|ZP_07325686.1| carboxynorspermidine decarboxylase [Acetivibrio cellulolyticus CD2]
 gi|302593202|gb|EFL62921.1| carboxynorspermidine decarboxylase [Acetivibrio cellulolyticus CD2]
          Length = 379

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 147/373 (39%), Positives = 219/373 (58%), Gaps = 8/373 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y++D++ L  NL+    +++  G  +LLALK F+   +F  + QY+ G TSSSL+
Sbjct: 8   LPTPCYIVDERLLRKNLEILHSVQERTGCSILLALKGFSMHSVFPLVGQYLKGVTSSSLF 67

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK---LHKKI 118
           E  LG EK G E HAY  AY + E D ++  CD I+FN+  Q  KFKDK +       + 
Sbjct: 68  EARLGFEKMGKEVHAYAPAYIEEEFDELIKYCDHIVFNSFDQWRKFKDKVKNNSSKKIEC 127

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
           G+R+NP  S     + +P    SRLG    +    E+  ++GL FH  CE  S       
Sbjct: 128 GIRVNPEYSEISTAIYNPCYKNSRLGVTLSNFKPDELDGIDGLHFHTMCEQNS-DTLLRT 186

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
           +K ++++FG FI +++W++LGGG H T  DY ++   + +  F +KY V IYLEPGEAI 
Sbjct: 187 IKVVDEKFGEFIKRMKWVNLGGGHHITRPDYDIETLIRSILYFKDKYGVDIYLEPGEAIA 246

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCG 294
            NT  L   VLDI +N   + I+D+S   H+PD L       I     P+  P+T  + G
Sbjct: 247 LNTGFLVAKVLDIVDNGMKIAILDASAACHMPDVLEMPYRPNIIDAGSPDEYPFTYRLGG 306

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            +CLAGD+ G++ F++P+K GD++ F D+A Y + + N FNG+N+P+IA+ N +  IK I
Sbjct: 307 NTCLAGDVIGDYSFKQPLKPGDKLVFCDMAHYTMVKNNTFNGVNLPSIALFNEEEGIKII 366

Query: 355 REFSYNDYYNNLS 367
           R+F Y D+ N LS
Sbjct: 367 RQFKYEDFKNRLS 379


>gi|325291264|ref|YP_004267445.1| carboxynorspermidine decarboxylase [Syntrophobotulus glycolicus DSM
           8271]
 gi|324966665|gb|ADY57444.1| carboxynorspermidine decarboxylase [Syntrophobotulus glycolicus DSM
           8271]
          Length = 377

 Score =  287 bits (735), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 134/372 (36%), Positives = 215/372 (57%), Gaps = 6/372 (1%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           ++ TP Y+I+++ L+ NL+    +++ +G ++LLA K F+ + ++  L +Y+ GTT+S L
Sbjct: 7   LVPTPSYVIEEKLLVKNLEILKSVQERSGARILLAQKAFSMFRVYPLLARYLCGTTASGL 66

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           YE  LG E+FG E H ++ AY+D E + +L+  D I+FN+ +Q  KF  +     KK GL
Sbjct: 67  YEARLGREEFGKEVHIFSPAYRDDEFEEILAVADHIVFNSFAQWEKFGRRTLAAGKKCGL 126

Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           RINP  S      L +P  P SRLG    +    ++  ++GL  H  C+       +  L
Sbjct: 127 RINPECSTQNGPDLYNPCAPHSRLGVTKANFQPDKLAGISGLHLHTLCQQN-ADALAETL 185

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
           K  E  FG ++  +EW++LGGG H T +DY +    + +    + Y + +YLEPGEA+  
Sbjct: 186 KAFEAGFGEYLYDLEWLNLGGGHHITREDYDLDLLVRTISRLRQTYDLTVYLEPGEAVAL 245

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGR 295
           ++  L ++VLDI +N  N+ I+D+S   H+PD L       I     P    YT  + G 
Sbjct: 246 DSGFLVSSVLDILDNGMNIAILDTSAACHMPDVLEMPYRPEIIGAGQPGEKKYTYRLGGP 305

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           +CLAGDI G++ F++P+  GDR+ F D+A Y++ + N FNG+ +P I ++   GT + IR
Sbjct: 306 TCLAGDIIGDYSFDRPLFPGDRLVFCDMAIYSMVKNNTFNGMRLPDIILRTAGGTDEIIR 365

Query: 356 EFSYNDYYNNLS 367
            F Y D+ + LS
Sbjct: 366 SFGYTDFKDRLS 377


>gi|39997633|ref|NP_953584.1| carboxynorspermidine decarboxylase [Geobacter sulfurreducens PCA]
 gi|39984525|gb|AAR35911.1| carboxynorspermidine decarboxylase [Geobacter sulfurreducens PCA]
          Length = 400

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 130/372 (34%), Positives = 208/372 (55%), Gaps = 8/372 (2%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y++D  +L +NL     +++ +G K+L+ALK FA W +F  + + + G  +SS +E
Sbjct: 30  PSPAYVVDLGRLRHNLAILDQVQRRSGAKILMALKAFAMWSVFPIIRETLHGVCASSPWE 89

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IGL 120
             LG E+FG E H++  A+K+ ++  +L   + ++FN+ +QL +F+   +K   +  +GL
Sbjct: 90  ARLGREEFGREVHSFAAAFKESDVVELLQTSNHLVFNSFNQLERFRPLWEKERGRVSVGL 149

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP  S     + DP  P SRLG   ++     ++ V GL FH  CE   F   +   K
Sbjct: 150 RVNPEHSEGHTPIYDPCAPASRLGIPRREFDGRSLEGVEGLHFHTLCEQL-FEPLARTAK 208

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
             E++FG F+  ++W++LGGG H T + Y +    + +  F  KY V++YLEPGEAI   
Sbjct: 209 VFEEKFGPFLHGMKWLNLGGGHHITREGYDIDALVELITYFKRKYGVEVYLEPGEAIAIG 268

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296
           T  L   VLD+  N  ++ I+D S   H+PD L       I     P    +T  + G S
Sbjct: 269 TGILVGEVLDVVHNEMDIAILDVSATCHMPDVLEMPYRPGITAGFDPGEKAHTYRLAGPS 328

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTIKAIR 355
           CLAGD+ G++ F+KP+K GDR+ FED++ Y + +   FNGI  P I       G ++ +R
Sbjct: 329 CLAGDVIGDWSFDKPLKPGDRLVFEDMSHYTMVKTTTFNGIQHPAICTFEPETGELRVVR 388

Query: 356 EFSYNDYYNNLS 367
           +F Y D+ + LS
Sbjct: 389 KFGYEDFRSRLS 400


>gi|317051695|ref|YP_004112811.1| carboxynorspermidine decarboxylase [Desulfurispirillum indicum S5]
 gi|316946779|gb|ADU66255.1| carboxynorspermidine decarboxylase [Desulfurispirillum indicum S5]
          Length = 377

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 127/371 (34%), Positives = 209/371 (56%), Gaps = 6/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+++++KL +NL+    +++ +G K+LLALK FA W  F  + + + GT +S L+
Sbjct: 8   VPTPCYVLEEEKLQHNLNILDRVQRESGAKILLALKGFAMWSTFPMIREVLHGTAASGLH 67

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH-KKIGL 120
           E  LG E+ G E H ++ A+ +  +  +L   D I+FN+ SQ  + +   ++      G+
Sbjct: 68  EARLGCEEMGREVHTFSPAFTEESLREILGYSDHIVFNSFSQWERLQHVIREKEGVSCGI 127

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP  S  +  + +P   FSR G          +  ++G+ FH +CE  S       L+
Sbjct: 128 RVNPEYSEVEPPIYNPCVAFSRFGVTRDQFRPDLLDGLDGIHFHTHCEQNS-DALERTLE 186

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E +F  F  Q++W++ GGG H T  DY V    + +++F  +Y+++IYLEPGEA+   
Sbjct: 187 VVEAKFSQFFPQLKWVNFGGGHHITRADYDVDRLIRIIQQFRHRYNLEIYLEPGEAVGWQ 246

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296
           T  L  +V+DI  N  ++ I+D+S  AH+PD L       I     P   P+T  + G +
Sbjct: 247 TGPLVASVVDILHNGMDIAILDASAAAHMPDVLEMPYRPAIRGAAEPGELPFTYRLGGNT 306

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CLAGD+ G++ F  P++ GDRI FED+  Y + + N FNG+ +P+IA+    G +  +R+
Sbjct: 307 CLAGDVIGDYSFASPLQPGDRIVFEDMTHYTMVKNNTFNGVPLPSIAIWRKSGRLDVVRK 366

Query: 357 FSYNDYYNNLS 367
           F Y DY   LS
Sbjct: 367 FGYEDYRMRLS 377


>gi|56461100|ref|YP_156381.1| carboxynorspermidine decarboxylase [Idiomarina loihiensis L2TR]
 gi|56180110|gb|AAV82832.1| Carboxynorspermidine decarboxylase [Idiomarina loihiensis L2TR]
          Length = 377

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 135/370 (36%), Positives = 211/370 (57%), Gaps = 5/370 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I +P Y++D++ L  NL+    +++ +G  ++LALK +A W  F  + QY+ G T+SS++
Sbjct: 9   IPSPCYVLDEKLLRKNLELMQKVQEQSGADIILALKGYAMWSAFPLIRQYLKGCTASSVW 68

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+F  E HAY  AYK  +ID +L   + + FN+VSQ +K++++       +GLR
Sbjct: 69  EAKLAAEEFSREVHAYAPAYKQEDIDELLPLVNHLSFNSVSQWHKYREQTADAGVSVGLR 128

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP    ++  L DP+ P SRLG +  +  + ++  V GL  HN CE  SF      L  
Sbjct: 129 INPEHQEAETELYDPSAPGSRLGIRASELNQQDLTGVEGLHVHNLCECDSFA-LERTLDA 187

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           +E  FG  + Q++W++LGGG   T + Y V    ++LK   E Y +Q+ LEPG A+   T
Sbjct: 188 VENRFGEQLKQMKWLNLGGGHLMTRQGYDVDHLIKQLKRLRETYDLQVILEPGSAVAWQT 247

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGRSC 297
             L   V+DI EN   + ++D S  AH+PD L       I     P    ++  + G SC
Sbjct: 248 GPLVCEVVDIVENQGQIALLDISATAHMPDVLEMPYRPVITGAGLPAEKAFSYRLGGNSC 307

Query: 298 LAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF 357
           LAGD+ GE+ F++P+ +GDR+ FED+  Y + + ++FNG+  P I +   +G    +R+F
Sbjct: 308 LAGDVIGEYSFDQPLAVGDRLVFEDMMHYTMVKTSFFNGVQHPAIGILRENGQFDCVRQF 367

Query: 358 SYNDYYNNLS 367
           SY D+ N LS
Sbjct: 368 SYEDFRNRLS 377


>gi|325660854|ref|ZP_08149482.1| carboxynorspermidine decarboxylase [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325472928|gb|EGC76138.1| carboxynorspermidine decarboxylase [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 378

 Score =  285 bits (730), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 136/372 (36%), Positives = 220/372 (59%), Gaps = 6/372 (1%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           ++ TPY+++D+++LL+NL+    + + +G K+LLA K F+ + ++  L +Y+ GTT+S L
Sbjct: 8   VVSTPYFVVDERRLLHNLEILKQVAEESGCKILLAQKAFSMFSVYPLLRKYLCGTTASGL 67

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           YE  LG E+FGGETH ++ AY+  E D +L   D ++FN+ +Q+ K+  +A+   K IGL
Sbjct: 68  YEARLGKEEFGGETHVFSPAYRAEEFDELLQYVDDLVFNSPAQVRKYGIRAKNAGKSIGL 127

Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           R+NP  S      + DP  P SRLG   +   E  +  ++G+  H  CE  S       +
Sbjct: 128 RVNPECSTQEGHAIYDPCAPGSRLGTTLEAFEEELVPLLDGIHMHTLCEQNSDD-LEKTV 186

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
           + +E +FG ++ Q++W++LGGG H T  DY  +   + ++   EKY +++YLEPGEA+V 
Sbjct: 187 EALEDKFGKWLPQMKWLNLGGGHHITRADYDRERLVRIIRRLREKYQLEVYLEPGEAVVL 246

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGR 295
           N   L  +V++I  N   + I+D+S   H+PD L       +     P    YT    G 
Sbjct: 247 NAGDLVASVMEIVHNNMEIAILDTSAACHMPDVLEMPYRPPVQKSGNPGEKQYTYRFAGP 306

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           +CLAGD+ G++ FEKP+  G R+ FED+A Y + + N FNG+ +P+I  ++ +G    +R
Sbjct: 307 TCLAGDVIGDYSFEKPLTEGSRVVFEDMALYTMVKTNTFNGMALPSIVFRDQEGEEHLVR 366

Query: 356 EFSYNDYYNNLS 367
            F Y D+ N LS
Sbjct: 367 TFGYEDFKNRLS 378


>gi|291544655|emb|CBL17764.1| carboxynorspermidine decarboxylase [Ruminococcus sp. 18P13]
          Length = 383

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 134/371 (36%), Positives = 217/371 (58%), Gaps = 7/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y++D+ +L  NL+    +++ +G K+LLA K F+ +  +  + +Y+ G+T+S LY
Sbjct: 14  VPTPCYIVDEARLRRNLELLQMVQQRSGAKILLAQKAFSMYRTYPMIRKYLAGSTASGLY 73

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIG 119
           E  L  E+ GGE H Y+ AYK  E D +L   D I+FN+ +Q  +++D+  A       G
Sbjct: 74  EAKLAREEMGGEVHIYSPAYKPEEFDEILRISDHIVFNSCAQWKRYRDQVQACSRKISCG 133

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           LRINP  + ++  L +P    SRLG    +  E  ++ ++GL FH  CE  S       L
Sbjct: 134 LRINPEYAETETDLYNPCFTGSRLGTTLANLEEDALEGLDGLHFHTMCEQNS-DTLERTL 192

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
           + +E++FG ++++++W++ GGG H T  DY V+   +  ++F+EKY VQ+YLEPGEA+  
Sbjct: 193 RVVEEKFGKYLSRMQWVNFGGGHHITRPDYDVELLIRLCQDFAEKYHVQVYLEPGEAVAL 252

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----YTAMVCGR 295
           +   L T VLD   N  ++ IVD+S   H+PD L       I     P    YT  +   
Sbjct: 253 HAGYLVTQVLDFVHNGLDIAIVDASAACHMPDVLEMPYRPEILGAGQPGELAYTYRLGAP 312

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           +CLAGD+ G++ F  P++IGDR+ F D+A Y++ + N FNG+ +P I + + DG ++ +R
Sbjct: 313 TCLAGDVIGDYSFAAPLQIGDRLVFCDMAIYSMVKNNTFNGMPLPAILLAHADGRVETVR 372

Query: 356 EFSYNDYYNNL 366
           +F Y D+   L
Sbjct: 373 QFGYADFKMRL 383


>gi|255658390|ref|ZP_05403799.1| carboxynorspermidine decarboxylase [Mitsuokella multacida DSM
           20544]
 gi|260849723|gb|EEX69730.1| carboxynorspermidine decarboxylase [Mitsuokella multacida DSM
           20544]
          Length = 384

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 131/372 (35%), Positives = 202/372 (54%), Gaps = 9/372 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+I K  L +NL     + ++ G  +LLA KCF+ +  +  + +Y+ GTT+S LY
Sbjct: 15  VPTPSYVIAKDLLEHNLRILHEVEESTGAHVLLAQKCFSMYHYYPLIAEYLSGTTASGLY 74

Query: 62  EVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E  LGHE+   FG ETH ++ AYK+ E   +   C  I+FN+ +Q  KF   A       
Sbjct: 75  EARLGHEEMGKFGKETHVFSPAYKEAEFAELTKICGHIVFNSFAQWKKFGPAALAAGVSC 134

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
           GLRINP  S  +  + DP    SRLG + +D  ES ++ + GL FH  CE       +  
Sbjct: 135 GLRINPERSTQEHAIYDPCAAGSRLGVRLRDFDESALEGLEGLHFHTLCEQG-ADALAVT 193

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
           L+ +E +FG ++ Q++WI+ GGG H T   Y +    + ++   ++Y + +Y+EPGEA+ 
Sbjct: 194 LEAVEAKFGKYLPQMKWINFGGGHHITKPGYDIALLKKCIRHMQQEYGLTVYIEPGEAVA 253

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCG 294
            N   L   VLDI +      I+D+S   H+PD +       +     P    +T    G
Sbjct: 254 LNAGFLVAEVLDIQQENAI-AILDTSAACHMPDVIEMPYRPPVLGSGEPGEKAHTYTFAG 312

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            +CLAGD  G + F++P+ IGDRI F D+A Y + + N FNG+ +P I   + DG+ + +
Sbjct: 313 PTCLAGDTIGTYSFDEPLAIGDRIVFCDMAIYTMVKNNTFNGMPLPAIIASDEDGSWQTV 372

Query: 355 REFSYNDYYNNL 366
           R+F Y D+   L
Sbjct: 373 RQFGYEDFKMRL 384


>gi|169351540|ref|ZP_02868478.1| hypothetical protein CLOSPI_02320 [Clostridium spiroforme DSM 1552]
 gi|169291762|gb|EDS73895.1| hypothetical protein CLOSPI_02320 [Clostridium spiroforme DSM 1552]
          Length = 369

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 145/371 (39%), Positives = 229/371 (61%), Gaps = 7/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPYYLID++ L  NL    Y+++  G K+LLA KCF+ + ++  + +Y+DGTT+S L+
Sbjct: 1   MKTPYYLIDEELLKKNLKVLHYVKEKTGCKILLAQKCFSMFSVYPLIRKYLDGTTASGLF 60

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LG+E+   E H Y+ AY+D EI+ +++ CD ++FN+ +Q  K+K+ A+K +   G+R
Sbjct: 61  EAKLGYEEMKKENHVYSAAYRDDEIEEIMNICDHVVFNSFNQWAKYKELAKKTNTSCGIR 120

Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           INP  S      + DP   +SR+G   ++  E  +  + GL FH  CE  S       +K
Sbjct: 121 INPECSTQVGHEIYDPCAKYSRMGVTLENFQEDLLDGIEGLHFHTLCEQNSDD-LVTTIK 179

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++FG ++ Q++W++ GGG H T  DY ++     + E  EKY VQ+YLEPGEA+  N
Sbjct: 180 AVEEKFGKYLYQMKWLNFGGGHHITRDDYDLETLINVINEIKEKYQVQVYLEPGEAVALN 239

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----YTAMVCGRS 296
              L ++VLDI  N   + I+D+S   H+PD L       I  +  P    YT  + G +
Sbjct: 240 AGFLVSSVLDIINNGIVIAIMDTSAACHMPDVLEMPYRPDIIDSDKPRVKKYTYRLGGPT 299

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CLAGD+  ++ F++P+KIG ++ F+D+A Y++ + N FNG+N+P+I +K  D  +K IRE
Sbjct: 300 CLAGDVISDYSFDQPLKIGQQLWFKDMAIYSMVKNNTFNGMNLPSIVLKQGDK-LKVIRE 358

Query: 357 FSYNDYYNNLS 367
           F Y+D+ N LS
Sbjct: 359 FGYDDFKNRLS 369


>gi|222054774|ref|YP_002537136.1| carboxynorspermidine decarboxylase [Geobacter sp. FRC-32]
 gi|221564063|gb|ACM20035.1| carboxynorspermidine decarboxylase [Geobacter sp. FRC-32]
          Length = 384

 Score =  283 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 127/372 (34%), Positives = 208/372 (55%), Gaps = 8/372 (2%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y++D  +L +NL     ++K +G K+LLALK F+ W +F  + + + G  +SS +E
Sbjct: 14  PSPAYVVDLGRLRHNLAILDDVQKRSGAKILLALKAFSMWSVFPIIRETLYGVCASSPWE 73

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IGL 120
             LG E+F  E H++  A+K+ ++  +L   + ++FN+ +QL +F+   +K   +  +GL
Sbjct: 74  ARLGREEFDREVHSFAAAFKERDVVELLPLSNHLVFNSFNQLERFRPLWEKERGRVSVGL 133

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP  S     + DP    SRLG   ++     ++ V GL FH  CE   F      +K
Sbjct: 134 RVNPEHSEGHTAIYDPCAVNSRLGIPRREFEGRSLEGVEGLHFHTLCEQL-FEPLERTVK 192

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
             +++FG F+  ++W++LGGG H T + Y +    + +K    KY V++YLEPGEAI   
Sbjct: 193 VFDEKFGSFMPGMKWLNLGGGHHITREGYDIDGLVELVKHLKAKYDVEVYLEPGEAIAIG 252

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296
           T  L   V+D+ +N  ++ I+D S   H+PD L       I     P    +T  + G S
Sbjct: 253 TGILVGEVMDVVKNGMDIAILDVSATCHMPDVLEMPYRPGITGGFDPGVKEHTYRLGGPS 312

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTIKAIR 355
           CLAGD+ G++ FEKP++ GDR++FED++ Y + +   FNGI  P I         +K +R
Sbjct: 313 CLAGDVIGDWSFEKPLQPGDRLAFEDMSHYTMVKTTTFNGIQHPAICTYEPETEELKVVR 372

Query: 356 EFSYNDYYNNLS 367
           +F Y+D+ + LS
Sbjct: 373 QFDYSDFKSRLS 384


>gi|326790656|ref|YP_004308477.1| carboxynorspermidine decarboxylase [Clostridium lentocellum DSM
           5427]
 gi|326541420|gb|ADZ83279.1| carboxynorspermidine decarboxylase [Clostridium lentocellum DSM
           5427]
          Length = 377

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 137/371 (36%), Positives = 215/371 (57%), Gaps = 7/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y++D++ L+ NL+    + + AG ++LLA K F+ +  F  + QY+ G TSSSL+
Sbjct: 8   VPTPCYVVDERLLIKNLEILKKVEEEAGCRILLATKAFSMYETFPLIAQYLSGVTSSSLH 67

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIG 119
           E  LG+E+ G E H Y  AYK+ E D ++  C+ I+FN+ SQ NK+K+K  A       G
Sbjct: 68  EARLGYEEMGKEVHIYAAAYKEEEFDKIMHYCNHIVFNSFSQWNKYKEKVKAAGKTISCG 127

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           LRINP  +  +  + +P  P SR+G   +     +++ + GL FH  CE  S      +L
Sbjct: 128 LRINPEYAEVETEIYNPCAPKSRMGITLEYFEGEDLEGIEGLHFHAMCEQNS-DTLERIL 186

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
           K +E++FG ++ Q++WI+ GGG H T  DY ++   + +K   E Y +++YLEPGEA+  
Sbjct: 187 KVVEEKFGAYLHQMKWINFGGGHHITRADYDLEKLIKCIKHIKETYDIEVYLEPGEAVAL 246

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGR 295
           NT  L +TVL+   N  ++ I+D+S   H+PD L       I          YT  +   
Sbjct: 247 NTGYLVSTVLETLHNDIDIAILDTSAACHMPDVLEMPYRPQIIGSGLAGEKAYTYRLGSA 306

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           +CLAGD+ G++ F+ P+K GDR+ F D+A Y + + N FNGIN+P+I + +     K I+
Sbjct: 307 TCLAGDVIGDYSFDAPLKEGDRLVFCDMAHYTMVKNNTFNGINLPSIVLYSEKEGFKIIK 366

Query: 356 EFSYNDYYNNL 366
            F Y D+ + L
Sbjct: 367 SFGYEDFKSRL 377


>gi|331085412|ref|ZP_08334497.1| carboxynorspermidine decarboxylase [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330407650|gb|EGG87148.1| carboxynorspermidine decarboxylase [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 378

 Score =  282 bits (722), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 136/372 (36%), Positives = 220/372 (59%), Gaps = 6/372 (1%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           ++ TPY+++D+++LL+NL+    + + +G K+LLA K F+ + ++  L +Y+ GTT+S L
Sbjct: 8   VVCTPYFVVDERRLLHNLEILKQVAEESGCKILLAQKAFSMFSVYPLLRKYLCGTTASGL 67

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           YE  LG E+FGGETH ++ AY+  E D +L   D ++FN+ +Q+ K+  +A+   K IGL
Sbjct: 68  YEARLGKEEFGGETHVFSPAYRAEEFDELLQYVDDLVFNSPAQVRKYGIRAKNAGKSIGL 127

Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           R+NP  S      + DP  P SRLG   +   E  +  ++G+  H  CE  S       +
Sbjct: 128 RVNPECSTQEGHAIYDPCAPGSRLGTTLEAFEEELVPLLDGIHMHTLCEQNSDD-LEKTV 186

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
           + +E +FG ++ Q++W++LGGG H T  DY  +   + ++   EKY +++YLEPGEA+V 
Sbjct: 187 EALEDKFGKWLPQMKWLNLGGGHHITRADYDRERLVRIIRRLREKYQLEVYLEPGEAVVL 246

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGR 295
           N   L  +V++I  N   + I+D+S   H+PD L       +     P    YT    G 
Sbjct: 247 NAGDLVASVMEIVHNNMEIAILDTSAACHMPDVLEMPYRPPVQKSGNPGEKQYTYRFAGP 306

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           +CLAGD+ G++ FEKP+  G R+ FED+A Y + + N FNG+ +P+I  ++ +G    +R
Sbjct: 307 TCLAGDVIGDYSFEKPLTEGSRVVFEDMALYTMVKTNTFNGMALPSIVFRDQEGEEHLVR 366

Query: 356 EFSYNDYYNNLS 367
            F Y D+ N LS
Sbjct: 367 TFGYEDFKNRLS 378


>gi|302384815|ref|YP_003820637.1| carboxynorspermidine decarboxylase [Clostridium saccharolyticum
           WM1]
 gi|302195443|gb|ADL03014.1| carboxynorspermidine decarboxylase [Clostridium saccharolyticum
           WM1]
          Length = 373

 Score =  282 bits (722), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 131/370 (35%), Positives = 209/370 (56%), Gaps = 8/370 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTP Y+ID+ +L  NLD    ++++ G ++LLA K F+ +  +  + +Y+DGTT+S LY
Sbjct: 6   LKTPCYVIDEGRLEKNLDILKKVKESTGCRILLAQKAFSCFAEYPLIGRYLDGTTASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LG E+ G ETH +  AYK+ +   +   CD I+FN+ SQL K+ +       K G+R
Sbjct: 66  EARLGREEMGLETHVFAPAYKEEDFKELTEICDHIVFNSFSQLEKYHN--SLGGVKAGIR 123

Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           INP  S      + DP  P SRLG       E  +  ++G  FH  CE  S       L 
Sbjct: 124 INPQCSTQEGHEIYDPCAPGSRLGVPLDHFKEEWLPWLSGFHFHTLCEQNSDD-LKKTLD 182

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++FG +++ + W+++GGG H T +DY +      +K   EKY +Q+YLEPGEA+  N
Sbjct: 183 AVEEKFGKYLSGLSWLNMGGGHHITREDYDIGLLETCIKRIKEKYGLQVYLEPGEAVALN 242

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----TGPYTAMVCGRS 296
              L T V+D+ +N    +I+D+S   H+PD L       +  +       +T  +   +
Sbjct: 243 AGYLVTEVMDVVDNGIKTLILDASAACHMPDVLEMPYRPPLKDSGKPGEKAFTYRLSSCT 302

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CLAGD+ G++ F++ +K GD++ F D+A Y++ + N FNG+ +P IA+ + +G    I+ 
Sbjct: 303 CLAGDVIGDYSFDRELKPGDKLYFMDMAIYSMVKNNTFNGMPLPAIAIMDKEGDCHVIKR 362

Query: 357 FSYNDYYNNL 366
           F Y D+ N L
Sbjct: 363 FGYEDFKNRL 372


>gi|326201069|ref|ZP_08190941.1| carboxynorspermidine decarboxylase [Clostridium papyrosolvens DSM
           2782]
 gi|325988637|gb|EGD49461.1| carboxynorspermidine decarboxylase [Clostridium papyrosolvens DSM
           2782]
          Length = 382

 Score =  282 bits (721), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 143/372 (38%), Positives = 214/372 (57%), Gaps = 7/372 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y++D++ L+ NL+    I+K  G K+LLA K F+   ++  + +Y+ G TSSSL+
Sbjct: 12  LPTPCYIVDERLLVKNLEILDSIQKRTGCKILLAQKGFSMHSVYPLIGKYLAGVTSSSLF 71

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IG 119
           E  LG+EK G E H Y  AY + E D ++  CD I+FN+  Q  K+K K +   KK   G
Sbjct: 72  EARLGYEKMGKEVHIYAPAYIEEEFDEIMKYCDHIVFNSFHQWGKYKGKVKTATKKIGCG 131

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +RINP  S  +  + DP   FSRLG    +    E++ + GL FH  CE  S       +
Sbjct: 132 IRINPEYSELEHPIYDPCYKFSRLGVTLPNFKPEELEGIEGLHFHTMCEQNS-DTLERTI 190

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
           K ++++FG +I  ++W++ GGG H T  DY ++   + +  F +KY + +YLEPGEA+  
Sbjct: 191 KVVDEKFGRYIKDMKWLNFGGGHHITRPDYDIEALVRSINYFQDKYGIDVYLEPGEAVAL 250

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGR 295
           NT  L   VLD  EN  N+ I+D+S   H+PD L       I     P+    T  + G 
Sbjct: 251 NTGYLVAKVLDTVENGMNIAILDTSAACHMPDVLEMPYRPNIIGAGMPDENLVTYRLGGH 310

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           +CLAGDI G++ F + +K GDR+ F D+A Y++ + N FNGIN+P IA+ +    IK I+
Sbjct: 311 TCLAGDIIGDYSFNQKLKPGDRLVFCDMAHYSMVKNNTFNGINLPAIALYSEKEGIKIIK 370

Query: 356 EFSYNDYYNNLS 367
           +F Y D+   LS
Sbjct: 371 QFGYEDFEGRLS 382


>gi|160881179|ref|YP_001560147.1| carboxynorspermidine decarboxylase [Clostridium phytofermentans
           ISDg]
 gi|160429845|gb|ABX43408.1| carboxynorspermidine decarboxylase [Clostridium phytofermentans
           ISDg]
          Length = 379

 Score =  282 bits (721), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 138/372 (37%), Positives = 207/372 (55%), Gaps = 7/372 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y+++++ L  NL     I    G K+LLA K F+ +  +  +  Y+ GTT+SSL+
Sbjct: 9   IPTPSYVVEERLLKRNLSLLKSIMDQTGCKILLAQKAFSMFYYYPLIGSYLAGTTASSLF 68

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKIG 119
           E  LG E+ GGE H +N AY++ E++ ++S CD I+FNT  Q  K+K+  QK       G
Sbjct: 69  EARLGKEEMGGEVHIFNPAYQESEMEQIISLCDHIVFNTPKQWLKYKEVIQKSGKKVSCG 128

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           LR+NP  S  +  L +P    SRLG    +  E +++ + GL FH  CE  S       L
Sbjct: 129 LRVNPQYSEIEVDLYNPCAKGSRLGTILDNIQEEDLEGLEGLHFHTMCEQNS-DVLVRTL 187

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
           K +E++F   + +++WI+ GGG H T +DY V+     +    E Y +++YLEPGEAI  
Sbjct: 188 KVVEEKFSFLLKKMKWINFGGGHHITREDYDVESLISSILHMKETYGIEVYLEPGEAIGL 247

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----TGPYTAMVCGR 295
           NT  L T VLD+        I+D+S E H+PD L       I          YT  + G 
Sbjct: 248 NTGYLVTKVLDVCGEHGECAILDTSAECHMPDVLEMPYRPEIIGAGKAGEKAYTYRLGGP 307

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           +CLAGD+ GE+ F++P+K GD + F D++ Y++ + N FNGIN+P+I        I  ++
Sbjct: 308 TCLAGDVVGEYSFDEPLKEGDILVFCDMSHYSMVKNNTFNGINLPSIVAYTEKEGIVIVK 367

Query: 356 EFSYNDYYNNLS 367
           +F Y D+   LS
Sbjct: 368 QFGYEDFKMRLS 379


>gi|148263055|ref|YP_001229761.1| carboxynorspermidine decarboxylase [Geobacter uraniireducens Rf4]
 gi|146396555|gb|ABQ25188.1| carboxynorspermidine decarboxylase [Geobacter uraniireducens Rf4]
          Length = 384

 Score =  282 bits (721), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 130/372 (34%), Positives = 206/372 (55%), Gaps = 8/372 (2%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y++D  +L +NL     ++K +G K+LLALK F+ W +F  + + + G  +SS +E
Sbjct: 14  PSPAYVVDLGRLRHNLAILDEVQKRSGAKILLALKAFSMWSVFPIIRETLQGVCASSPWE 73

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IGL 120
             LG E+FG E H+++ A+K+ ++  +L   + ++FN+ +QL +F+   +K H +  +GL
Sbjct: 74  ARLGREEFGREVHSFSAAFKESDVVDLLETSNHLVFNSFAQLERFRPLWEKEHGRVSVGL 133

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP  +     + DP  P SRLG +  +     +  V+GL FH  CE   F       +
Sbjct: 134 RVNPEHAEGHTAIYDPCAPKSRLGIRRAEFEGRSLSGVDGLHFHTLCEQL-FEPLERTAR 192

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
             E++FG F+  + W++LGGG H T + Y +      ++ F EKY +++YLEPGEAI   
Sbjct: 193 VFEEKFGEFLHGMRWLNLGGGHHITREGYDIDALVDLVRYFREKYDIEVYLEPGEAIAIG 252

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296
           T  L   VLD+  N   + I+D S   H+PD L       I           T  + G S
Sbjct: 253 TGILVAEVLDVVHNEMEIAILDVSATCHMPDILEMPYRPEIEGGFAAGEKACTYRLGGPS 312

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTIKAIR 355
           CLAGD+ G++ FE P+K GDR++F D+A Y + +   FNGI+ P I       G ++ +R
Sbjct: 313 CLAGDVIGDWSFEAPLKAGDRLAFLDMAHYTMVKTTTFNGIHHPHICTFEPQTGELRIVR 372

Query: 356 EFSYNDYYNNLS 367
            F+Y D+ N LS
Sbjct: 373 SFTYEDFRNRLS 384


>gi|240145064|ref|ZP_04743665.1| carboxynorspermidine decarboxylase [Roseburia intestinalis L1-82]
 gi|257202890|gb|EEV01175.1| carboxynorspermidine decarboxylase [Roseburia intestinalis L1-82]
 gi|291535389|emb|CBL08501.1| carboxynorspermidine decarboxylase [Roseburia intestinalis M50/1]
          Length = 377

 Score =  282 bits (720), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 131/373 (35%), Positives = 212/373 (56%), Gaps = 8/373 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y++D++KL  NL     + +  G  +LLA K F+ + ++  + QY+ GTT+S ++
Sbjct: 6   IPTPCYVVDEKKLKQNLKILQNLEQETGCHVLLAQKAFSMFSLYPLIGQYISGTTASGIF 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIG 119
           E  LG E+ G E H +  AYK+ +++ ++  CD +IFN+ +Q  K++     Q+     G
Sbjct: 66  EARLGKEEMGKENHVFAPAYKEKDMEELVQICDHVIFNSFAQYEKYQHYFLQQECTASAG 125

Query: 120 LRINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
           +R+NP  S      + DP  P SRLG    +  +   + + GL FH  CE  +       
Sbjct: 126 IRVNPECSTQEGHEIYDPCGPGSRLGVVKSEFPDQLPEGIEGLHFHTLCEQNADD-LITT 184

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
               E++FG ++ Q++W++LGGG H T  DY + +  + + E   KY+V++YLEPGEAI 
Sbjct: 185 WHAFEEKFGSYLKQVKWLNLGGGHHITRADYQLDELKKLICEIRRKYNVRVYLEPGEAIA 244

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCG 294
            N   L T V+DI  N  +++I+D+S   H+PD L       +     P   P+T  +  
Sbjct: 245 LNAGYLVTEVMDIVHNGMDILILDASAACHMPDVLEMPYRPPLKDGYLPGEKPHTCRLSS 304

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            +CLAGD+ G++ F +  ++GDR+ FED+A Y++ + N FNG+ +P IAV   DG ++ I
Sbjct: 305 MTCLAGDVIGDYSFAQKKQVGDRLVFEDMAIYSMVKNNTFNGMPLPGIAVLREDGDVEMI 364

Query: 355 REFSYNDYYNNLS 367
           +EF Y D+   LS
Sbjct: 365 KEFGYEDFKGRLS 377


>gi|237735244|ref|ZP_04565725.1| carboxynorspermidine decarboxylase [Mollicutes bacterium D7]
 gi|229380989|gb|EEO31080.1| carboxynorspermidine decarboxylase [Coprobacillus sp. D7]
          Length = 369

 Score =  282 bits (720), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 142/371 (38%), Positives = 230/371 (61%), Gaps = 7/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPYYLID+Q L  NL     +++  G K+LLA KCF+ + ++  + +Y+DGTT+S LY
Sbjct: 1   MKTPYYLIDEQLLEKNLKILHTVKERTGCKILLAQKCFSMFSVYPLIAEYLDGTTASGLY 60

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LG+E+   E H ++ AY+D EI+ +++ CD ++FN+ +Q  K+++ A++     G+R
Sbjct: 61  EAKLGYEEMHKENHVFSTAYRDDEIEEIMNICDHVVFNSFNQWQKYQNLAKQTSTSCGIR 120

Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           INP  S      + DP   FSR+G   ++  E  ++ + GL FH  CE  S       ++
Sbjct: 121 INPECSTQIGHEIYDPCAKFSRMGVTLENFKEELLEGIEGLHFHTLCEQNSDD-LITTIR 179

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++FG ++ Q++W++ GGG H T KDY ++   + + E  EKY VQ+YLEPGEA+  N
Sbjct: 180 AVEEKFGKYLGQMKWLNFGGGHHITRKDYDLEKLIKIINEIKEKYQVQVYLEPGEAVALN 239

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGRS 296
              L ++VLDI+ N   + I+D+S   H+PD L       I     PN   YT  + G +
Sbjct: 240 AGFLVSSVLDITHNGMAIAIMDTSAACHMPDVLEMPYRPEIIDSALPNVKTYTYRLGGPT 299

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CLAGDI G++ F++P+++G ++ F+D+A Y++ + N FNG+N+P+I +      +K I+E
Sbjct: 300 CLAGDIIGDYSFDQPLQVGQQLWFKDMAIYSMVKNNTFNGMNLPSIVL-KQKEKLKIIKE 358

Query: 357 FSYNDYYNNLS 367
           F+Y D+ N LS
Sbjct: 359 FNYCDFKNRLS 369


>gi|306829507|ref|ZP_07462697.1| carboxynorspermidine decarboxylase [Streptococcus mitis ATCC 6249]
 gi|304428593|gb|EFM31683.1| carboxynorspermidine decarboxylase [Streptococcus mitis ATCC 6249]
          Length = 375

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 136/371 (36%), Positives = 205/371 (55%), Gaps = 6/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+ID  KL  N     Y+++ AG K+LLA K ++ +  +  ++QY+ GTT+S LY
Sbjct: 6   VPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+F GE H +  A+KD +++ +L   D I+FN+  QL K   + +     +GLR
Sbjct: 66  EAKLAREEFSGEVHVFAPAFKDADLEELLEITDHIVFNSERQLRKHGPRCRAAGISVGLR 125

Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           INP  S      L DP  P SR G          +  V+GL FH  CE  S       LK
Sbjct: 126 INPQCSTQGDHALYDPCAPGSRFGVTLDKIPSDLLDLVDGLHFHTLCEQGSDD-LETTLK 184

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E +FG ++ Q++W+++GGG H T +DY V      +K   E Y++++Y+EPGEAI  N
Sbjct: 185 AVEAQFGPYLHQVKWLNMGGGHHITREDYDVDLLISEIKRIRETYNLEVYIEPGEAIALN 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296
              L T VLDI  N   ++++D+S   H+PD L       +         P+T  +   +
Sbjct: 245 AGYLATEVLDIVANEIEVLVLDASATCHMPDVLEMPYRPPLRNGFEAQEKPHTYRLSSNT 304

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CL GD+ G++ FE PV+IGDR+ FED+A Y+  + N FNGI +P++ + N  G    ++ 
Sbjct: 305 CLTGDVIGDYSFENPVEIGDRLYFEDMAIYSFVKNNTFNGIGLPSLYLMNEQGDCSLVKA 364

Query: 357 FSYNDYYNNLS 367
           F Y D+   LS
Sbjct: 365 FGYQDFKERLS 375


>gi|322387825|ref|ZP_08061433.1| carboxynorspermidine decarboxylase [Streptococcus infantis ATCC
           700779]
 gi|321141327|gb|EFX36824.1| carboxynorspermidine decarboxylase [Streptococcus infantis ATCC
           700779]
          Length = 375

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 136/371 (36%), Positives = 205/371 (55%), Gaps = 6/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+ID  KL  N      +++ AG K+LLA K ++ +  +  ++QY+ GTT+S LY
Sbjct: 6   VPTPSYIIDLGKLEENCRILQEVQEKAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+F GE H +  A+K+ +++ +L   D I FN+  QL K+  + ++    +GLR
Sbjct: 66  EAKLAREEFPGEVHVFAPAFKESDMEELLQISDHIDFNSERQLRKYGHRCREAGISVGLR 125

Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           INP  S      L DP  P SR G          +  V+GL FH  CE  +       LK
Sbjct: 126 INPQCSTQGDHALYDPCAPGSRFGVTLDKIPSDLLDLVDGLHFHTLCEQGADD-LQTTLK 184

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E +FG ++ Q++W+++GGG H T  DY V      +K   E Y+V +Y+EPGEAI  N
Sbjct: 185 AVEDQFGAYLHQVKWLNMGGGHHITRDDYDVYLLISEIKRIRETYNVDVYIEPGEAIALN 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296
              L T VLDI EN    +++D+S   H+PD L       +         PYT  +   +
Sbjct: 245 AGYLATEVLDIVENGIETLVLDASASCHMPDVLEMPYRPPLRDGFEAQEKPYTYRLSSNT 304

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CL GDI G++ FEKP++IGDR+ FED+A Y+  + N FNGI +P++ + + +G    ++ 
Sbjct: 305 CLTGDIIGDYSFEKPIEIGDRLYFEDMAIYSFVKNNTFNGIGLPSLYLMDKEGECSLVKA 364

Query: 357 FSYNDYYNNLS 367
           F Y D+   LS
Sbjct: 365 FGYQDFKERLS 375


>gi|253699937|ref|YP_003021126.1| carboxynorspermidine decarboxylase [Geobacter sp. M21]
 gi|251774787|gb|ACT17368.1| carboxynorspermidine decarboxylase [Geobacter sp. M21]
          Length = 384

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 123/372 (33%), Positives = 208/372 (55%), Gaps = 8/372 (2%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y++D  +L +NL     +++ +G K+LLALK F+ W +F  + + + G  +SS +E
Sbjct: 14  PSPSYVVDLGRLRHNLAILDEVQQKSGAKILLALKAFSMWSVFPIIAETLHGVCASSPWE 73

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGL 120
             LG E+FGGE H+++ A+K+ ++  +LS  + ++FN+ +QL +F+   ++      +GL
Sbjct: 74  ARLGMEEFGGEVHSFSAAFKESDVVELLSTSNHLVFNSFNQLERFRPLWERHAGKVSVGL 133

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP  S     + DP  P SRLG    +     ++ V GL FH  CE   F       +
Sbjct: 134 RVNPGHSEGHTPIYDPAAPKSRLGILRSEFEGKSLQGVEGLHFHTLCEQL-FEPLERTAR 192

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
             E++FG F+ +++W++LGGG H T + Y V    + ++ F EKY +++YLEPGEAI   
Sbjct: 193 AFEEKFGEFLPRMKWLNLGGGHHITREGYDVDALIELVRYFREKYDLEVYLEPGEAIAIG 252

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296
           T  L + VLD+  N  ++ ++D S   H+PD L       I          +   + G S
Sbjct: 253 TGILVSEVLDVVHNEVDIAVLDVSATCHMPDILEMPYRPEILGGYDAGEKAHDYRLGGPS 312

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTIKAIR 355
           CLAGD+ G++ F+ P+ +G++++F D++ Y + +   FNGI  P I       G ++ +R
Sbjct: 313 CLAGDVIGDWSFDHPLAVGEKLAFLDMSHYTMVKTTTFNGIQHPHICTFEPQTGELEVVR 372

Query: 356 EFSYNDYYNNLS 367
            F Y D+ + LS
Sbjct: 373 SFGYQDFKSRLS 384


>gi|315613156|ref|ZP_07888066.1| carboxynorspermidine decarboxylase [Streptococcus sanguinis ATCC
           49296]
 gi|315314718|gb|EFU62760.1| carboxynorspermidine decarboxylase [Streptococcus sanguinis ATCC
           49296]
          Length = 375

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 130/371 (35%), Positives = 208/371 (56%), Gaps = 6/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+ID  KL  N     Y+++ AG K+LLA K ++ +  +  ++QY+ GTT+S LY
Sbjct: 6   VPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+F GE H +  A+KD +++ +L   D I+FN+  QL K   + ++    +GLR
Sbjct: 66  EAKLAREEFPGEVHVFAPAFKDADLEELLEITDHIVFNSERQLRKHGARCREAGISVGLR 125

Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +NP  S      L DP  P SR G          +  V+GL FH  CE  +       LK
Sbjct: 126 LNPQCSTQGNHALYDPCAPGSRFGVSLDKIPSDLLDLVDGLHFHTLCEQGADD-LETTLK 184

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++FG ++ +++W+++GGG H T +DY V      +K   + Y++++Y+EPGEAI  N
Sbjct: 185 AVEEQFGPYLHEVKWLNMGGGHHITREDYDVDLLISEIKRIRDTYNLEVYIEPGEAIALN 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296
              L T VLDI EN  +++++D+S   H+PD L       +          +T  +   +
Sbjct: 245 AGYLATEVLDIVENGMDILVLDASATCHMPDVLEMPYRPPLRNGFEPQEKAHTYRLSSNT 304

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CL GD+ G++ FE P++IGDR+ FED+A Y+  + N FNGI +P++ + +  G    ++ 
Sbjct: 305 CLTGDVIGDYSFENPIQIGDRLYFEDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCSLVKT 364

Query: 357 FSYNDYYNNLS 367
           F Y D+   LS
Sbjct: 365 FGYQDFKGRLS 375


>gi|253581175|ref|ZP_04858433.1| carboxynorspermidine decarboxylase [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847532|gb|EES75504.1| carboxynorspermidine decarboxylase [Ruminococcus sp. 5_1_39BFAA]
          Length = 373

 Score =  281 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 136/371 (36%), Positives = 221/371 (59%), Gaps = 8/371 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TP Y+ID++K+  NL+    ++++ G K+LLA K F+ + ++  + +Y+ GTT+S L+
Sbjct: 6   LQTPCYVIDEKKMRENLEILKKVQEDTGCKILLAQKAFSGFALYPMIGKYLAGTTASGLF 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LG+E+ G E H ++ AY+  +I+ +   CD IIFN+ +QL KFK+        +GLR
Sbjct: 66  EARLGYEEMGKENHVFSPAYRTEDIEELDRICDHIIFNSTAQLKKFKEVCTGAS--LGLR 123

Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           INP  S      + DP  P SRLG   ++     +K ++GL FH  CE  +       L+
Sbjct: 124 INPECSTQGDHAIYDPCAPGSRLGVTRENFDGECLKWIDGLHFHTLCEQNADD-LEKTLQ 182

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++FG F++++ W+++GGG H T +DY VK   + ++   E Y + IYLEPGEA+  N
Sbjct: 183 AVEEKFGEFLSEVSWLNMGGGHHITREDYNVKLLEKCIQHMKETYDLDIYLEPGEAVALN 242

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----TGPYTAMVCGRS 296
              L T V+DI EN    +I+D+S   H+PD L       +  +       YT  +   +
Sbjct: 243 AGYLVTEVMDIVENEIRTLILDASAACHMPDVLEMPYRPPLKDSGEAGEKAYTYRLSSCT 302

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CLAGD+ G++ F++ ++IGD++ F D+A Y++ + N FNG+ +P IAV + DG  + IR 
Sbjct: 303 CLAGDVIGDYSFDREIQIGDKLYFMDMAIYSMVKNNTFNGMPLPDIAVMHEDGECEVIRH 362

Query: 357 FSYNDYYNNLS 367
           F Y D+ + LS
Sbjct: 363 FGYEDFKSRLS 373


>gi|291520960|emb|CBK79253.1| carboxynorspermidine decarboxylase [Coprococcus catus GD/7]
          Length = 374

 Score =  281 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 131/370 (35%), Positives = 212/370 (57%), Gaps = 6/370 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y++D+ ++ +NL+    + K+ G  +LLA K F+ + ++  + +Y+ GTT+S LY
Sbjct: 6   LPTPCYVVDEGRIRHNLEILQQLEKDTGCHVLLAQKAFSMYSLYPMIGRYISGTTASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LG+E+ G E H +  AYK+ ++  +++ CD IIFN+ +Q  K+KD  Q     +G+R
Sbjct: 66  EARLGYEEMGKENHVFAPAYKEADMQELVTICDHIIFNSFAQYEKYKDICQAKGVSVGIR 125

Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +NP  S      + DP    SRLG       E   + + GL FH  CE  +        +
Sbjct: 126 VNPQCSTQEGHDIYDPCGYASRLGVTKAQFPEVLPEGIEGLHFHTLCEQNADD-LVTTFQ 184

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
             E++FG ++  I+W++LGGG H T KDY  +   + ++   + Y + +YLEPGEA+  N
Sbjct: 185 AFEEKFGKYLHCIKWLNLGGGHHITRKDYQYETLVKLIRYIRDTYHMTVYLEPGEAVALN 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGRS 296
              + T V+DI  N  +++I+D S   H+PD L       +      N  PYT  +   +
Sbjct: 245 AGYMVTEVMDIVHNDMDILILDVSAACHMPDVLEMPYRPPLSGGYEANQKPYTYRLSSMT 304

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CLAGD+ G++ FEKPV+IGDR+ FED+A Y++ + N FNG+ +P IA+   +G  + +R+
Sbjct: 305 CLAGDVIGDYSFEKPVQIGDRLVFEDMAIYSMVKNNTFNGMPLPGIALLRENGNTEMVRK 364

Query: 357 FSYNDYYNNL 366
           F Y D+   L
Sbjct: 365 FGYQDFKMRL 374


>gi|258544778|ref|ZP_05705012.1| carboxynorspermidine decarboxylase [Cardiobacterium hominis ATCC
           15826]
 gi|258519987|gb|EEV88846.1| carboxynorspermidine decarboxylase [Cardiobacterium hominis ATCC
           15826]
          Length = 389

 Score =  281 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 128/375 (34%), Positives = 206/375 (54%), Gaps = 10/375 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y++D+  L  NL    +++  +G K+LLALK FA +     +++Y+ G  +S L+
Sbjct: 16  LPTPCYVVDEALLERNLQLLAHVQAESGAKVLLALKGFAMFHFAPLISRYLSGVCASGLH 75

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK----DKAQKLHKK 117
           E  LG E F GE H ++ AY   ++D VL+  D +IFN+ +Q  +F+      A++    
Sbjct: 76  EAKLGREFFSGEVHTFSAAYPPADMDEVLALSDHVIFNSCNQWERFRAQALAAAKRKPLH 135

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
            GLRINP  S     + DP+ P SRLG          +  + GL FHN CE         
Sbjct: 136 FGLRINPQQSEGAVAIYDPSAPGSRLGVIRGQLRPESLTGITGLHFHNLCEQD-VAPLRR 194

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI 237
            L  +E++FG  + Q++W++ GGG H T + Y V++    ++ F E++ V++++EPGEA+
Sbjct: 195 TLAAVERQFGDILPQMQWVNFGGGHHVTREGYAVEELIALIRAFRERWGVEVFIEPGEAV 254

Query: 238 VTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVC 293
              T    T VLD+  N  N+ ++D S  AH+PD L       +     P+  PYT  + 
Sbjct: 255 ALGTGVYVTEVLDVIWNHLNIAVIDGSCTAHLPDVLEMPYRPDVLGGAMPHERPYTYRIG 314

Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV-DGTIK 352
           G +CLAGDI G++ F +P+++G R+ F D++ Y + + N FNG+ +P I   +     + 
Sbjct: 315 GLTCLAGDIIGDYSFAEPLEVGKRLMFMDMSHYTMVKTNTFNGVKLPAIVAWDSRTDALT 374

Query: 353 AIREFSYNDYYNNLS 367
            +REF Y D+   LS
Sbjct: 375 TVREFGYEDFKMRLS 389


>gi|322374305|ref|ZP_08048819.1| carboxynorspermidine decarboxylase [Streptococcus sp. C300]
 gi|321279805|gb|EFX56844.1| carboxynorspermidine decarboxylase [Streptococcus sp. C300]
          Length = 375

 Score =  281 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 131/371 (35%), Positives = 206/371 (55%), Gaps = 6/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+ID  KL  N      +++ AG K+LLA K ++ +  +  ++QY+ GTT+S LY
Sbjct: 6   VPTPAYVIDLAKLEENCRILQQVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+F GE H +  A+KD +++ +L   D I+FN+  QL K   + ++    +GLR
Sbjct: 66  EAKLAREEFPGEVHVFAPAFKDADLEELLEITDHIVFNSERQLRKHGARCREAGISVGLR 125

Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +NP  S      L DP  P SR G          +  V+GL FH  CE  +       LK
Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVSLDKVPSDLLDLVDGLHFHTLCEQGADD-LETTLK 184

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E +FG ++ +++W+++GGG H T +DY V      +K   E Y++++Y+EPGEAI  N
Sbjct: 185 AVEAQFGPYLHEVKWLNMGGGHHITREDYDVDLLISEIKRIRETYNLEVYIEPGEAIALN 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296
              L T VLDI EN   ++++D+S   H+PD L       +          +T  +   +
Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFEAQEKAHTYRLSSNT 304

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CL GD+ G++ FE PV+IGDR+ FED+A Y+  + N FNGI +P++ + +  G    +++
Sbjct: 305 CLTGDVIGDYSFENPVEIGDRLYFEDMAIYSFVKNNTFNGIGLPSLYLMDEQGECNLVKD 364

Query: 357 FSYNDYYNNLS 367
           F Y D+   LS
Sbjct: 365 FGYQDFKGRLS 375


>gi|119385681|ref|YP_916736.1| carboxynorspermidine decarboxylase [Paracoccus denitrificans
           PD1222]
 gi|119376276|gb|ABL71040.1| carboxynorspermidine decarboxylase [Paracoccus denitrificans
           PD1222]
          Length = 368

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 188/366 (51%), Positives = 260/366 (71%), Gaps = 1/366 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TPYYLID  +L  N++   Y+R+ +G K LLALKCFA W  FD +  +MDGTTSSSL+
Sbjct: 4   LQTPYYLIDLARLRENMERIRYLRERSGAKCLLALKCFATWSAFDFMRDFMDGTTSSSLF 63

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E+ LGHE+FG ETHAY+VA+ D EID  L   D IIFN++ QL++F  +A +    +GLR
Sbjct: 64  ELRLGHEEFGKETHAYSVAWADHEIDEALGYADKIIFNSLGQLDRFGARAAQRGIAMGLR 123

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP  S S F LADP RPFSRLGE   +++E  +  ++G+M H NCEN  F  F A L  
Sbjct: 124 LNPRFSTSGFDLADPARPFSRLGEWDLNRLEQALDRISGVMIHYNCENADFELFDAQLAR 183

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           IE EFG F+ +++W+SLGGGIHFT + YP+     RL+ FSE++ VQ++LEPGEA +T +
Sbjct: 184 IETEFGGFLERLDWVSLGGGIHFTGEGYPLDRLADRLRAFSERFGVQVFLEPGEASITRS 243

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGD 301
           T+L  TVLD+  + K++ IVDSS+EAH+ D L+Y+E+A   P  G +   + G++CLAGD
Sbjct: 244 TSLEVTVLDVIHHGKDVAIVDSSIEAHMLDLLIYRETAK-LPQDGEHPWQIAGKTCLAGD 302

Query: 302 IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361
           IFGE  F +P+K+GDR+S  D  GY + +KNWFNG+ MP IA+++ DGTI  +R F+Y+D
Sbjct: 303 IFGEGRFAQPLKVGDRLSIADAGGYTMVKKNWFNGVPMPAIAIRDEDGTIHEVRRFTYDD 362

Query: 362 YYNNLS 367
           Y  +LS
Sbjct: 363 YKASLS 368


>gi|322391913|ref|ZP_08065378.1| carboxynorspermidine decarboxylase [Streptococcus peroris ATCC
           700780]
 gi|321145393|gb|EFX40789.1| carboxynorspermidine decarboxylase [Streptococcus peroris ATCC
           700780]
          Length = 375

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 133/371 (35%), Positives = 203/371 (54%), Gaps = 6/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+ID  KL  N      +++ AG K+LLA K ++ +  +  ++QY+ GTT+S LY
Sbjct: 6   VPTPAYVIDLAKLEENCSILHQVQEKAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+F GE H +  A+K+ +++ +L   D I+FN+  QL K+  + ++    +GLR
Sbjct: 66  EAKLAREEFPGEVHVFAPAFKEADMEELLQISDHIVFNSERQLRKYGQRCREAGISVGLR 125

Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +NP  S      L DP  P SR G          ++ V+GL FH  CE  +       LK
Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTLDKIPSDLLELVDGLHFHTLCEQGADD-LQTTLK 184

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E +FG ++ Q++W+++GGG H T  DY V      +K   E Y + +Y+EPGEAI  N
Sbjct: 185 AVEDQFGAYLHQVKWLNMGGGHHITRDDYDVDLLISEIKRIRETYDLDVYIEPGEAIALN 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296
              L T VLDI EN    +++D+S   H+PD L       +          YT  +   +
Sbjct: 245 AGYLATEVLDIVENGIETLVLDASASCHMPDVLEMPYRPPLRNGFEAQEKAYTYRLSSNT 304

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CL GDI G++ FE PV IGDR+ FED+A Y+  + N FNGI +P++ + + +G    ++ 
Sbjct: 305 CLTGDIIGDYSFENPVNIGDRLYFEDMAIYSFVKNNTFNGIGLPSLYLMDKEGECSLVKA 364

Query: 357 FSYNDYYNNLS 367
           F Y D+   LS
Sbjct: 365 FGYQDFKERLS 375


>gi|268612016|ref|ZP_06145743.1| carboxynorspermidine decarboxylase [Ruminococcus flavefaciens FD-1]
          Length = 378

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 139/370 (37%), Positives = 220/370 (59%), Gaps = 6/370 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+ID+ +L++NL+    +    G K+LLA K F+ + ++  + +Y+ GT  S L+
Sbjct: 10  LPTPCYIIDEARLIHNLEILKGVEDRTGAKILLAQKAFSCYHVYPLIAEYISGTACSGLF 69

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LG+E+ G E H ++ AY++ EID ++S C  IIFN+ SQL++++D+     KK+GLR
Sbjct: 70  EAKLGYEEMGKENHVFSAAYRESEIDEIISYCGHIIFNSFSQLDRYRDRVLAAGKKVGLR 129

Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           INP  S      + DP  P SRLG   ++    ++  V+GL FH  CE  S     + L 
Sbjct: 130 INPEYSTQEGHEIYDPCSPASRLGITRRNFRADDLDGVSGLHFHTLCEQNSDD-LESTLN 188

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            IE++FG  + ++EWI+ GGG H T  DY +    + +K   EKY ++++LEPGEA+  N
Sbjct: 189 AIEEKFGDILPKMEWINFGGGHHITRDDYDIPRLERCIKRMQEKYGLEVFLEPGEAVALN 248

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----TGPYTAMVCGRS 296
              L T VLD++EN   + I+D+S   H+PD L       +  +       +T  +  ++
Sbjct: 249 AGWLVTEVLDLTENDMPIAILDTSAACHMPDVLEMPYRPPLVDSGKAGEKEFTYRLGSQT 308

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CLAGD  GE+ F+KP+ IGDR+ F D+A Y++ + N FNG+ +P I +   DGT + +R+
Sbjct: 309 CLAGDSIGEYSFDKPLNIGDRLVFGDMAIYSMVKNNTFNGMPLPEIILMKKDGTFRQLRK 368

Query: 357 FSYNDYYNNL 366
           F Y+D+   L
Sbjct: 369 FGYSDFRERL 378


>gi|260887132|ref|ZP_05898395.1| carboxynorspermidine decarboxylase [Selenomonas sputigena ATCC
           35185]
 gi|330839096|ref|YP_004413676.1| carboxynorspermidine decarboxylase [Selenomonas sputigena ATCC
           35185]
 gi|260863194|gb|EEX77694.1| carboxynorspermidine decarboxylase [Selenomonas sputigena ATCC
           35185]
 gi|329746860|gb|AEC00217.1| carboxynorspermidine decarboxylase [Selenomonas sputigena ATCC
           35185]
          Length = 387

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 119/371 (32%), Positives = 195/371 (52%), Gaps = 6/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y++ +  L  NL     +++  G  +LLA K F+ +  +  + +Y+ G+ +S L+
Sbjct: 18  VPTPAYVVMEDLLRRNLTVLRDLQQETGAHVLLAQKAFSMFHFYPLIAEYLAGSAASGLF 77

Query: 62  EVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           E  L +E+  G E H ++ A+K+ ++  ++   D I+FN+ +Q  K+ + A K     GL
Sbjct: 78  EARLAYEEMKGKENHVFSPAFKEADMAEIVKIADHIVFNSFAQWEKYGEFALKHGCACGL 137

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           RINP  S  +  + DP    SRLG K  D    +++ + GL FH  CE       +  L+
Sbjct: 138 RINPEYSTQEHAIYDPCSAGSRLGVKLGDFRPDKMEGLTGLHFHTLCEQG-AGPLAETLE 196

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++FG ++ Q+EWI+ GGG H T +DY +    Q +     KY +++Y+EPGEAI  +
Sbjct: 197 AVEEKFGAWLPQMEWINFGGGHHITREDYDIDLLKQCIMRMQTKYGLKVYIEPGEAIALD 256

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296
              L   VL+I EN   + I+D+S   H+PD +       +         P+     G +
Sbjct: 257 AGFLVAEVLEIVENDTPVAILDTSAACHMPDVIEMPYRPPVLGAGEAGEKPFAYTFAGPT 316

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CLAGD  G + F+ P+    RI F D+A Y + + N FNG+ +P I   +  G  + +R 
Sbjct: 317 CLAGDTIGTYSFDAPLAASRRIVFGDMAIYTMVKNNTFNGMPLPAIVAVDETGAWQVVRR 376

Query: 357 FSYNDYYNNLS 367
           F Y D+   LS
Sbjct: 377 FGYEDFKMRLS 387


>gi|152995410|ref|YP_001340245.1| carboxynorspermidine decarboxylase [Marinomonas sp. MWYL1]
 gi|150836334|gb|ABR70310.1| carboxynorspermidine decarboxylase [Marinomonas sp. MWYL1]
          Length = 365

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 219/367 (59%), Positives = 278/367 (75%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MIKTPYYLIDK  LL NL+   Y+R+ +G K LLALKCFA W +FD +  YMDGTTSSSL
Sbjct: 1   MIKTPYYLIDKAALLKNLEKIAYVRQQSGAKSLLALKCFATWSVFDLMQDYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           YEV LG  KF GETHAY+VAY D EI  VL + D IIFN++ Q N+FKD +    K  GL
Sbjct: 61  YEVKLGKTKFNGETHAYSVAYSDDEIAEVLDHSDKIIFNSIGQFNRFKDVS--KDKTRGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP VS S+F++ADP RPFSRLGE   +KI + I +++G MFHNNCEN SF  F  ML 
Sbjct: 119 RVNPQVSTSEFLIADPARPFSRLGEWDPEKIATVINDISGFMFHNNCENNSFERFDEMLN 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            IE+ FGH I Q++W+SLGGGIHFT + YP+  FCQRLK F+EKY +Q+YLEPGEA +T 
Sbjct: 179 LIEERFGHLIQQVKWVSLGGGIHFTGEGYPIDKFCQRLKSFAEKYDIQVYLEPGEASITK 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           +TTL  TVLD   N KNL +VDSS+EAH+ D L+Y+E+A + P  G +  M+CG+SCLAG
Sbjct: 239 STTLEVTVLDTLFNGKNLAVVDSSIEAHMLDLLIYRENAKMAPCDGEHEYMICGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGEF F+K +++GDR+SF+D AGY + +KNWFNG+ MP+IA++ +DG+I+ +REF YN
Sbjct: 299 DIFGEFKFDKALQVGDRLSFQDAAGYTMVKKNWFNGVKMPSIAIRQLDGSIELVREFDYN 358

Query: 361 DYYNNLS 367
           D+  NLS
Sbjct: 359 DFEQNLS 365


>gi|167755031|ref|ZP_02427158.1| hypothetical protein CLORAM_00535 [Clostridium ramosum DSM 1402]
 gi|167705081|gb|EDS19660.1| hypothetical protein CLORAM_00535 [Clostridium ramosum DSM 1402]
          Length = 369

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 142/371 (38%), Positives = 229/371 (61%), Gaps = 7/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPYYLID+Q L  NL     +++  G K+LLA KCF+ + ++  + +Y+DGTT+S LY
Sbjct: 1   MKTPYYLIDEQLLEKNLKILYTVKERTGCKILLAQKCFSMFSVYPLIAEYLDGTTASGLY 60

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LG+E+   E H ++ AY+D EI+ +++ CD ++FN+ +Q  K+++ A++     G+R
Sbjct: 61  EAKLGYEEMHKENHVFSTAYRDDEIEEIMNICDHVVFNSFNQWQKYQNLAKQTSTSCGIR 120

Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           INP  S      + DP   FSR+G   ++  E  ++ + GL FH  CE  S       ++
Sbjct: 121 INPECSTQIGHEIYDPCAKFSRMGVTLENFKEELLEGIEGLHFHTLCEQNSDD-LITTIR 179

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++FG ++ Q++W++ GGG H T KDY ++   + + E  EKY VQ+YLEPGEA+  N
Sbjct: 180 AVEEKFGKYLGQMKWLNFGGGHHITRKDYDLEKLIKIINEIKEKYQVQVYLEPGEAVALN 239

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGRS 296
              L ++VLDI  N   + I+D+S   H+PD L       I     PN   YT  + G +
Sbjct: 240 AGFLVSSVLDIIHNGMAIAIMDTSAACHMPDVLEMPYRPEIIDSALPNVKTYTYRLGGPT 299

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CLAGDI G++ F++P+++G ++ F+D+A Y++ + N FNG+N+P+I +      +K I+E
Sbjct: 300 CLAGDIIGDYSFDQPLQVGQQLWFKDMAIYSMVKNNTFNGMNLPSIVL-KQKEKLKIIKE 358

Query: 357 FSYNDYYNNLS 367
           F+Y D+ N LS
Sbjct: 359 FNYCDFKNRLS 369


>gi|85712875|ref|ZP_01043917.1| Carboxynorspermidine decarboxylase [Idiomarina baltica OS145]
 gi|85693339|gb|EAQ31295.1| Carboxynorspermidine decarboxylase [Idiomarina baltica OS145]
          Length = 380

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 133/370 (35%), Positives = 206/370 (55%), Gaps = 5/370 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I +P Y++D+  L NNL+    ++  +G  ++LALK ++ W  F  + QY+ G T+SS++
Sbjct: 12  IPSPCYVLDEALLRNNLELMKRVQVESGASIILALKGYSMWSAFPLIKQYLKGCTASSVW 71

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  +KFG E HAY  AYK  +I  +L   + I FN++SQ   + D+A+     +GLR
Sbjct: 72  EAQLAADKFGSEVHAYAPAYKAEDIKQLLPIVNHISFNSISQWEAYADQAKAAGVSVGLR 131

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP    +   L DP+ P SRLG +  +     + +V G+  HN CE  S+      L  
Sbjct: 132 VNPEHQEADTELYDPSAPGSRLGVRASELENVSLDDVEGIHVHNLCECDSYA-LERTLAA 190

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           +E +FG  + Q++W++LGGG   T + Y V     +L+     Y++ I LEPG A+   T
Sbjct: 191 VENKFGDLLHQVKWLNLGGGHLMTREGYDVDHLISQLQRLKATYNLDIILEPGSAVAWQT 250

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGRSC 297
             L   V+DI EN  ++ ++D S  AH+PD L       I     P   PY   + G SC
Sbjct: 251 GPLVCEVVDIVENQGSIALLDISATAHMPDVLEMPYRPHIEGAGLPADKPYRYRLGGNSC 310

Query: 298 LAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF 357
           LAGD+ GE+ F++P+K GDR+ F D+  Y + +  +FNG+  P I +   DG+ + IR F
Sbjct: 311 LAGDVIGEYSFDEPLKPGDRLVFADMMHYTMVKTTFFNGVQHPDIGILREDGSFERIRHF 370

Query: 358 SYNDYYNNLS 367
           +Y D+ + LS
Sbjct: 371 TYEDFRSRLS 380


>gi|331266385|ref|YP_004326015.1| LysA-like decarboxylase, diaminopimelate decarboxylase putative
           [Streptococcus oralis Uo5]
 gi|326683057|emb|CBZ00674.1| LysA-like decarboxylase, diaminopimelate decarboxylase putative
           [Streptococcus oralis Uo5]
          Length = 375

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 130/371 (35%), Positives = 207/371 (55%), Gaps = 6/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+ID  KL  N      +++ AG K+LLA K ++ +  +  ++QY+ GTT+S LY
Sbjct: 6   VPTPAYVIDLGKLEANCRILQQVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+F GE H +  A+K+ +++ +L   D I+FN+  QL K+  + ++    +GLR
Sbjct: 66  EAKLAREEFPGEVHVFAPAFKESDMEELLQISDHIVFNSERQLRKYGSRCREAGISVGLR 125

Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +NP  S      L DP  P SR G          +  V+GL FH  CE  +       LK
Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTLDKIPSDLLDLVDGLHFHTLCEQGADD-LETTLK 184

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E +FG ++ +++W+++GGG H T +DY V      +K   E Y++++Y+EPGEAI  N
Sbjct: 185 AVEAQFGPYLYKVKWLNMGGGHHITREDYDVDLLISEIKRIRETYNLEVYIEPGEAIALN 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296
              L T VLDI EN   ++++D+S   H+PD L       +          +T  +   +
Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFEAQEKAHTYRLSSNT 304

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CL GD+ G++ FE P++IGDR+ FED+A Y+  + N FNGI +P++ + +  G    ++ 
Sbjct: 305 CLTGDVIGDYSFENPIQIGDRLYFEDMAIYSFVKNNTFNGIGLPSLYLMDERGDCSLVKA 364

Query: 357 FSYNDYYNNLS 367
           FSY D+   LS
Sbjct: 365 FSYQDFKGRLS 375


>gi|148988355|ref|ZP_01819802.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           SP6-BS73]
 gi|147926036|gb|EDK77110.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           SP6-BS73]
          Length = 375

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 130/371 (35%), Positives = 206/371 (55%), Gaps = 6/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+ID  KL  N     Y+++ AG K+LLA K ++ +  +  ++QY+ GTT+S LY
Sbjct: 6   VPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+F GE H +  A+KD +++ +L   D I+FN+  QL K   + ++    +GLR
Sbjct: 66  EAKLAREEFPGEVHVFAPAFKDEDMEELLGITDHIVFNSERQLRKHGSRCREAGVSVGLR 125

Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +NP  S      L DP  P SR G          +  V+GL FH  CE  +       LK
Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDLLDLVDGLHFHTLCEQGADD-LQTTLK 184

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++FG ++ +++W+++GGG H T + Y V      +K   + Y+++IY+EPGEAI  N
Sbjct: 185 AVEEQFGPYLHEVKWLNMGGGHHITREGYDVDLLISEIKRIRKTYNLEIYIEPGEAIALN 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296
              L T VLDI EN   ++++D+S   H+PD L       +          +T  +   +
Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFESQEKAHTYRLSSNT 304

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CL GD+ G++ FE PV+IGDR+ F+D+A Y+  + N FNGI +P++ + +  G    ++ 
Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCSLLKA 364

Query: 357 FSYNDYYNNLS 367
           F Y D+   LS
Sbjct: 365 FGYQDFKGRLS 375


>gi|292670643|ref|ZP_06604069.1| carboxynorspermidine decarboxylase [Selenomonas noxia ATCC 43541]
 gi|292647809|gb|EFF65781.1| carboxynorspermidine decarboxylase [Selenomonas noxia ATCC 43541]
          Length = 381

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 122/369 (33%), Positives = 191/369 (51%), Gaps = 7/369 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP YL+ ++ L  NL     I ++ G K+LLA KCF+ +  +  + +Y+ GTT+S +Y
Sbjct: 16  VPTPSYLVYEELLEKNLKILAGIAEDTGAKVLLAQKCFSMYHYYPLIGKYLSGTTASGIY 75

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+ G E H +  AY   EI  +   CD IIFN+ +Q  +F   A+      G+R
Sbjct: 76  EARLSQEEMGKENHVFKPAYDAEEIRQLAQICDHIIFNSFAQWARFGRAARAQGASCGIR 135

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP  S  +  + DP  P SRLG K  D  E  ++ + GL FH  CE          L  
Sbjct: 136 INPECSTQEHAIYDPCAPGSRLGVKLADFREDLLEGIEGLHFHTLCEQG-ADALEVTLAA 194

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           +E++FG ++  ++W++ GGG H T +DY +    + ++   E Y   +YLEPGEA   N 
Sbjct: 195 VEEKFGKYLHGMKWLNFGGGHHITREDYDIPLLKKLIRHVQETYDTAVYLEPGEAAALNA 254

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRSC 297
             L   VL++      ++  ++S   H+PD +       +          +T    G +C
Sbjct: 255 GVLVAEVLEVQTGGNVIL--NTSATCHMPDVIEMPYRPPVVHAGEAGEKTHTYTFAGPTC 312

Query: 298 LAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF 357
           LAGD  G + F+ P+ +GDR+ F D+A Y + + N FNG+ +P I   +  G  + +R F
Sbjct: 313 LAGDTIGTYSFDTPLSVGDRVVFGDMAIYTMVKNNTFNGMPLPNIIAVSPSGAWEIVRAF 372

Query: 358 SYNDYYNNL 366
           SY+D+   L
Sbjct: 373 SYDDFKMRL 381


>gi|197119289|ref|YP_002139716.1| carboxynorspermidine/carboxyspermidine decarboxylase [Geobacter
           bemidjiensis Bem]
 gi|197088649|gb|ACH39920.1| carboxynorspermidine/carboxyspermidine decarboxylase [Geobacter
           bemidjiensis Bem]
          Length = 384

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 124/372 (33%), Positives = 208/372 (55%), Gaps = 8/372 (2%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y++D  +L +NL     ++K +G K+LLALK F+ W +F  +   + G  +SS +E
Sbjct: 14  PSPSYVVDLGRLRHNLAILNEVQKKSGAKILLALKAFSMWSVFPIIANTLHGVCASSPWE 73

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGL 120
             LG E+FGGE H+++ A+K+ ++  +L+  + ++FN+ +QL +F+   ++      +GL
Sbjct: 74  ARLGMEEFGGEVHSFSAAFKESDVVELLTTSNHLVFNSFNQLERFRPLWEQYAGKVSVGL 133

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP  S     + DP  P SRLG    +  +  ++ V GL FH  CE   F       +
Sbjct: 134 RVNPGHSEGHTPIYDPAAPKSRLGILRSEFDDKSLQGVEGLHFHTLCEQL-FEPLERTAR 192

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
             E++FG F+ +++W++LGGG H T + Y V    + ++ F EKY +++YLEPGEAI   
Sbjct: 193 VFEEQFGEFLPRMKWLNLGGGHHITREGYDVDALIKLVRYFREKYDLEVYLEPGEAIAIG 252

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296
           T  L + VLD+  N  ++ ++D S   H+PD L       I          +   + G S
Sbjct: 253 TGILVSEVLDVVHNEVDIAVLDVSATCHMPDILEMPYRPEILGGYDAGEKAHDYRLGGPS 312

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTIKAIR 355
           CLAGD+ G++ F+ P+ +G++++F D++ Y + +   FNGI  P I       G +K +R
Sbjct: 313 CLAGDVIGDWSFDHPLAVGEKLAFLDMSHYTMVKTTTFNGIQHPHICTFEPQTGELKVVR 372

Query: 356 EFSYNDYYNNLS 367
            F Y D+ + LS
Sbjct: 373 SFGYQDFKSRLS 384


>gi|148996988|ref|ZP_01824642.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           SP11-BS70]
 gi|168575583|ref|ZP_02721519.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           MLV-016]
 gi|194397835|ref|YP_002037557.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae G54]
 gi|307067577|ref|YP_003876543.1| diaminopimelate decarboxylase [Streptococcus pneumoniae AP200]
 gi|147756688|gb|EDK63728.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           SP11-BS70]
 gi|183578480|gb|EDT99008.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           MLV-016]
 gi|194357502|gb|ACF55950.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae G54]
 gi|306409114|gb|ADM84541.1| Diaminopimelate decarboxylase [Streptococcus pneumoniae AP200]
          Length = 375

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 130/371 (35%), Positives = 206/371 (55%), Gaps = 6/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+ID  KL  N     Y+++ AG K+LLA K ++ +  +  ++QY+ GTT+S LY
Sbjct: 6   VPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+F GE H +  A+KD +++ +L   D I+FN+  QL K   + ++    +GLR
Sbjct: 66  EAKLAREEFPGEVHVFAPAFKDEDMEELLGITDHIVFNSERQLRKHGSRCREAGVSVGLR 125

Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +NP  S      L DP  P SR G          +  V+GL FH  CE  +       LK
Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDLLDLVDGLHFHTLCEQGADD-LQTTLK 184

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++FG ++ +++W+++GGG H T + Y V      +K   + Y+++IY+EPGEAI  N
Sbjct: 185 AVEEQFGPYLHEVKWLNMGGGHHITREGYDVDLLISEIKRIRKTYNLEIYIEPGEAIALN 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296
              L T VLDI EN   ++++D+S   H+PD L       +          +T  +   +
Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFEAQEKAHTYRLSSNT 304

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CL GD+ G++ FE PV+IGDR+ F+D+A Y+  + N FNGI +P++ + +  G    ++ 
Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCSLLKA 364

Query: 357 FSYNDYYNNLS 367
           F Y D+   LS
Sbjct: 365 FGYQDFKGRLS 375


>gi|90021243|ref|YP_527070.1| 3-oxoacyl-(acyl-carrier-protein) reductase [Saccharophagus
           degradans 2-40]
 gi|89950843|gb|ABD80858.1| carboxynorspermidine decarboxylase [Saccharophagus degradans 2-40]
          Length = 387

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 135/376 (35%), Positives = 211/376 (56%), Gaps = 11/376 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P Y++DK KL  NL    Y+++ +G K+LLALK F+ + +   + +Y++G  +S L 
Sbjct: 13  VPSPCYVVDKAKLEQNLRILDYVQQQSGAKVLLALKAFSMFSLAPLVMKYLNGVCASGLN 72

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-----QKLHK 116
           E  LG E+FG E H Y+ A++  E + +L+  D ++FN+ +Q   +K +       + H 
Sbjct: 73  EAKLGREEFGKEVHTYSAAFRPQEFEEILAVSDHLVFNSFNQWETYKARCLAAQQDRPHL 132

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
           + GLRINP  S  +  + DP  P SR+G   K     ++  ++GL FH  CE   F   +
Sbjct: 133 EFGLRINPEHSEGETPMYDPCAPCSRMGIPIKQFANKDLHGISGLHFHTLCEQD-FAPLA 191

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
             L  +E++FG  +  ++W++ GGG H T  DY V    +RL  F  KY VQ+YLEPGEA
Sbjct: 192 RTLDAVEEKFGDILPSLKWVNFGGGHHITRADYQVDALIERLNAFQTKYDVQVYLEPGEA 251

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMV 292
           I  N     + VLD   N  ++ I+D+S   H+PD +       I     P    +T  +
Sbjct: 252 IALNAGVFVSEVLDTLNNGMDIAILDASATCHMPDVIEMPYRPRITGAGEPGERNHTYRL 311

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV-DGTI 351
            G SCLAGD+ G++ F  P++IGDR++FED+A Y + +   FNGIN+P+I V +     +
Sbjct: 312 GGPSCLAGDVIGDYSFSNPLQIGDRMTFEDMAIYTMVKNTTFNGINLPSICVWDSTTDEL 371

Query: 352 KAIREFSYNDYYNNLS 367
           + I+ F Y D+   LS
Sbjct: 372 EVIKNFGYEDFKQRLS 387


>gi|15900800|ref|NP_345404.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae TIGR4]
 gi|111658138|ref|ZP_01408836.1| hypothetical protein SpneT_02000704 [Streptococcus pneumoniae
           TIGR4]
 gi|149010437|ref|ZP_01831808.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           SP19-BS75]
 gi|14972394|gb|AAK75044.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae TIGR4]
 gi|147764918|gb|EDK71847.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           SP19-BS75]
          Length = 375

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 130/371 (35%), Positives = 206/371 (55%), Gaps = 6/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+ID  KL  N     Y+++ AG K+LLA K ++ +  +  ++QY+ GTT+S LY
Sbjct: 6   VPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+F GE H +  A+KD +++ +L   D I+FN+  QL K   + ++    +GLR
Sbjct: 66  EAKLAREEFPGEVHVFAPAFKDADLEELLEIMDHIVFNSERQLRKHGPRCREAGVSVGLR 125

Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +NP  S      L DP  P SR G          +  V+GL FH  CE  +       LK
Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDLLDLVDGLHFHTLCEQGADD-LQTTLK 184

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++FG ++ +++W+++GGG H T + Y V      +K   + Y+++IY+EPGEAI  N
Sbjct: 185 AVEEQFGPYLHEVKWLNMGGGHHITREGYDVDLLISEIKRIRKTYNLEIYIEPGEAIALN 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296
              L T VLDI EN   ++++D+S   H+PD L       +          +T  +   +
Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFESQEKAHTYRLSSNT 304

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CL GD+ G++ FE PV+IGDR+ F+D+A Y+  + N FNGI +P++ + +  G    ++ 
Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCSLLKA 364

Query: 357 FSYNDYYNNLS 367
           F Y D+   LS
Sbjct: 365 FGYQDFKGRLS 375


>gi|322376666|ref|ZP_08051159.1| carboxynorspermidine decarboxylase [Streptococcus sp. M334]
 gi|321282473|gb|EFX59480.1| carboxynorspermidine decarboxylase [Streptococcus sp. M334]
          Length = 375

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 130/371 (35%), Positives = 207/371 (55%), Gaps = 6/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y++D  KL  N     Y+++ AG K+LLA K ++ +  +  ++QY+ GTT+S LY
Sbjct: 6   VPTPAYVVDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+F GE H +  A+KD +++ +L   D I+FN+  QL K   + ++    +GLR
Sbjct: 66  EAKLAREEFPGEVHVFAPAFKDEDMEELLEITDHIVFNSERQLRKHGSRCREAGISVGLR 125

Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +NP  S      L DP  P SR G          +  V+GL FH  CE  +       LK
Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVILDKIPSDLLDLVDGLHFHTLCEQGADD-LQTTLK 184

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++FG ++  ++W+++GGG H T + Y V      +K   E Y++++Y+EPGEAI  N
Sbjct: 185 AVEEQFGSYLHHVKWLNMGGGHHITREGYDVDLLISEIKRIRETYNLEVYIEPGEAIALN 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296
              L T VLDI EN   ++++D+S   H+PD L       +          +T  +   +
Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGYEAQEKAHTYRLSSNT 304

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CL GD+ G++ FE PV+IGDR+ FED+A Y+  + N FNGI +P++ + + +G    +++
Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFEDMAIYSFVKNNTFNGIGLPSLYIMDENGDCDLVKD 364

Query: 357 FSYNDYYNNLS 367
           F Y D+   LS
Sbjct: 365 FGYQDFKGRLS 375


>gi|148992947|ref|ZP_01822566.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           SP9-BS68]
 gi|168490263|ref|ZP_02714462.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP195]
 gi|147928399|gb|EDK79415.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           SP9-BS68]
 gi|183571393|gb|EDT91921.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae SP195]
 gi|332073252|gb|EGI83731.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           GA17570]
          Length = 375

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 130/371 (35%), Positives = 206/371 (55%), Gaps = 6/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+ID  KL  N     Y+++ AG K+LLA K ++ +  +  ++QY+ GTT+S LY
Sbjct: 6   VPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+F GE H +  A+KD +++ +L   D I+FN+  QL K   + ++    +GLR
Sbjct: 66  EAKLAREEFPGEVHVFAPAFKDEDMEELLGITDHIVFNSERQLRKHGSRCREAGVSVGLR 125

Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +NP  S      L DP  P SR G          +  V+GL FH  CE  +       LK
Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDLLDLVDGLHFHTLCEQGADD-LQTTLK 184

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++FG ++ +++W+++GGG H T + Y V      +K   + Y+++IY+EPGEAI  N
Sbjct: 185 EVEEQFGPYLHEVKWLNMGGGHHITREGYDVDLLISEIKRIRKTYNLEIYIEPGEAIALN 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296
              L T VLDI EN   ++++D+S   H+PD L       +          +T  +   +
Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFEAQEKAHTYRLSSNT 304

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CL GD+ G++ FE PV+IGDR+ F+D+A Y+  + N FNGI +P++ + +  G    ++ 
Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCSLLKA 364

Query: 357 FSYNDYYNNLS 367
           F Y D+   LS
Sbjct: 365 FGYQDFKGRLS 375


>gi|15902865|ref|NP_358415.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae R6]
 gi|116515395|ref|YP_816296.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae D39]
 gi|168494349|ref|ZP_02718492.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           CDC3059-06]
 gi|182683867|ref|YP_001835614.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           CGSP14]
 gi|221231693|ref|YP_002510845.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae ATCC
           700669]
 gi|303254985|ref|ZP_07341064.1| putative carboxynorspermidine decarboxylase [Streptococcus
           pneumoniae BS455]
 gi|303259832|ref|ZP_07345807.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           SP-BS293]
 gi|303262246|ref|ZP_07348190.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           SP14-BS292]
 gi|303264668|ref|ZP_07350586.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae BS397]
 gi|303267169|ref|ZP_07353036.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae BS457]
 gi|303269417|ref|ZP_07355186.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae BS458]
 gi|15458422|gb|AAK99625.1| Carboxynorspermidine decarboxylase [Streptococcus pneumoniae R6]
 gi|116075971|gb|ABJ53691.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae D39]
 gi|182629201|gb|ACB90149.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           CGSP14]
 gi|183575664|gb|EDT96192.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           CDC3059-06]
 gi|220674153|emb|CAR68676.1| putative carboxynorspermidine decarboxylase [Streptococcus
           pneumoniae ATCC 700669]
 gi|301794065|emb|CBW36469.1| putative carboxynorspermidine decarboxylase [Streptococcus
           pneumoniae INV104]
 gi|301801767|emb|CBW34478.1| putative carboxynorspermidine decarboxylase [Streptococcus
           pneumoniae INV200]
 gi|302598065|gb|EFL65132.1| putative carboxynorspermidine decarboxylase [Streptococcus
           pneumoniae BS455]
 gi|302636569|gb|EFL67060.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           SP14-BS292]
 gi|302639037|gb|EFL69497.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           SP-BS293]
 gi|302641036|gb|EFL71414.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae BS458]
 gi|302643284|gb|EFL73564.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae BS457]
 gi|302645755|gb|EFL75984.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae BS397]
          Length = 375

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 130/371 (35%), Positives = 206/371 (55%), Gaps = 6/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+ID  KL  N     Y+++ AG K+LLA K ++ +  +  ++QY+ GTT+S LY
Sbjct: 6   VPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+F GE H +  A+KD +++ +L   D I+FN+  QL K   + ++    +GLR
Sbjct: 66  EAKLAREEFPGEVHVFAPAFKDEDMEELLGITDHIVFNSERQLRKHGARCREAGVSVGLR 125

Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +NP  S      L DP  P SR G          +  V+GL FH  CE  +       LK
Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDLLDLVDGLHFHTLCEQGADD-LQTTLK 184

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++FG ++ +++W+++GGG H T + Y V      +K   + Y+++IY+EPGEAI  N
Sbjct: 185 AVEEQFGPYLHEVKWLNMGGGHHITREGYDVDLLISEIKRIRKTYNLEIYIEPGEAIALN 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296
              L T VLDI EN   ++++D+S   H+PD L       +          +T  +   +
Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFESQEKAHTYRLSSNT 304

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CL GD+ G++ FE PV+IGDR+ F+D+A Y+  + N FNGI +P++ + +  G    ++ 
Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCSLLKA 364

Query: 357 FSYNDYYNNLS 367
           F Y D+   LS
Sbjct: 365 FGYQDFKGRLS 375


>gi|225856584|ref|YP_002738095.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae P1031]
 gi|225725236|gb|ACO21088.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae P1031]
          Length = 375

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 130/371 (35%), Positives = 206/371 (55%), Gaps = 6/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+ID  KL  N     Y+++ AG K+LLA K ++ +  +  ++QY+ GTT+S LY
Sbjct: 6   VPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+F GE H +  A+KD +++ +L   D I+FN+  QL K   + ++    +GLR
Sbjct: 66  EAKLAREEFPGEVHVFAPAFKDADLEELLEIMDHIVFNSERQLRKHGPRCREAGVSVGLR 125

Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +NP  S      L DP  P SR G          +  V+GL FH  CE          LK
Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDLLDLVDGLHFHTLCEQG-VDDLQTTLK 184

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++FG ++ +++W+++GGG H T + Y V      +K   + Y+++IY+EPGEAI  N
Sbjct: 185 AVEEQFGPYLHEVKWLNMGGGHHITREGYDVDLLISEIKRIRKTYNLEIYIEPGEAIALN 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296
              L T VLDI EN   ++++D+S   H+PD L      ++          +T  +   +
Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPSLRNGFEAQEKAHTYRLSSNT 304

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CL GD+ G++ FE PV+IGDR+ F+D+A Y+  + N FNGI +P++ + +  G    ++ 
Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCSLLKA 364

Query: 357 FSYNDYYNNLS 367
           F Y D+   LS
Sbjct: 365 FGYQDFKGRLS 375


>gi|153007782|ref|YP_001368997.1| carboxynorspermidine decarboxylase [Ochrobactrum anthropi ATCC
           49188]
 gi|151559670|gb|ABS13168.1| carboxynorspermidine decarboxylase [Ochrobactrum anthropi ATCC
           49188]
          Length = 389

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 227/367 (61%), Positives = 277/367 (75%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MI+TPYYLIDK KL  N++   Y+R+ +G K LLALKCFA W +FD +++YMDGTTSSSL
Sbjct: 25  MIQTPYYLIDKTKLKRNMEKVAYVREKSGAKALLALKCFATWSVFDLMSEYMDGTTSSSL 84

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            EV LGHE+FGGETHAY+VAY D EID V+S+ D IIFN++ QL +F DKA   H K GL
Sbjct: 85  NEVRLGHERFGGETHAYSVAYADNEIDEVISHADKIIFNSIGQLERFADKA--AHIKRGL 142

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP VS S F LADP RPFSRLGE    K+E  +  V G M HNNCEN  F  F  ML 
Sbjct: 143 RLNPGVSSSTFDLADPARPFSRLGEWDVAKVEKVMDRVTGFMIHNNCENSDFGLFDKMLT 202

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
           +IE++FG  + ++EW+SLGGGIHFT  DYPV DFC RLK FSEK+ VQ+YLEPGEA +T 
Sbjct: 203 DIEEKFGSLLHRVEWVSLGGGIHFTGDDYPVDDFCARLKAFSEKFGVQVYLEPGEASITK 262

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           TTTL  TVLD   N KNL IVDSS+EAH+ D L+Y+E A + PN G ++ MVCG+SCLAG
Sbjct: 263 TTTLEVTVLDTLYNGKNLAIVDSSIEAHMLDLLIYREKAKMAPNNGEHSYMVCGKSCLAG 322

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGEF F+K + IGDR+SFED AGY + +KNWFNG+ MP IAV+ +DGT+K +REF Y 
Sbjct: 323 DIFGEFTFDKELSIGDRLSFEDAAGYTMVKKNWFNGVKMPAIAVRELDGTVKIVREFDYA 382

Query: 361 DYYNNLS 367
           D+  +LS
Sbjct: 383 DFEGSLS 389


>gi|168491008|ref|ZP_02715151.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           CDC0288-04]
 gi|183574729|gb|EDT95257.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           CDC0288-04]
          Length = 375

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 130/371 (35%), Positives = 206/371 (55%), Gaps = 6/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+ID  KL  N     Y+++ AG K+LLA K ++ +  +  ++QY+ GTT+S LY
Sbjct: 6   VPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+F GE H +  A+KD +++ +L   D I+FN+  QL K   + ++    +GLR
Sbjct: 66  EAKLAREEFPGEVHVFAPAFKDADLEELLGITDHIVFNSERQLRKHGARCREAGVSVGLR 125

Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +NP  S      L DP  P SR G          +  V+GL FH  CE  +       LK
Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDLLDLVDGLHFHTLCEQGADD-LQTTLK 184

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++FG ++ +++W+++GGG H T + Y V      +K   + Y+++IY+EPGEAI  N
Sbjct: 185 AVEEQFGPYLHEVKWLNMGGGHHITREGYDVDLLISEIKRIRKTYNLEIYIEPGEAIALN 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296
              L T VLDI EN   ++++D+S   H+PD L       +          +T  +   +
Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFESQEKAHTYRLSSNT 304

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CL GD+ G++ FE PV+IGDR+ F+D+A Y+  + N FNGI +P++ + +  G    ++ 
Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCSLLKA 364

Query: 357 FSYNDYYNNLS 367
           F Y D+   LS
Sbjct: 365 FGYQDFKGRLS 375


>gi|307706572|ref|ZP_07643379.1| carboxynorspermidine decarboxylase [Streptococcus mitis SK321]
 gi|307618027|gb|EFN97187.1| carboxynorspermidine decarboxylase [Streptococcus mitis SK321]
          Length = 375

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 131/371 (35%), Positives = 203/371 (54%), Gaps = 6/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+ID  KL  N     Y+++ AG K+LLA K ++ +  +  ++QY+ GTT+S LY
Sbjct: 6   VPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+F GE H +  A+KD +++ +L   D I+FN+  QL K   + +     +GLR
Sbjct: 66  EAKLAREEFPGEIHVFAPAFKDADLEELLEITDHIVFNSERQLRKHGARCRDAGVSVGLR 125

Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +NP  S      L DP  P SR G          ++ V+GL FH  CE  +       LK
Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTLDKIPSDLLELVDGLHFHTLCEQGADD-LQTTLK 184

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E +FG ++  ++W+++GGG H   + Y V      +K   E Y+++IY+EPGEAI  N
Sbjct: 185 AVEAQFGSYLHHVKWLNMGGGHHIIREGYDVDLLISEIKRIRETYNLEIYIEPGEAIALN 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296
              L T VLDI EN   ++++D+S   H+PD L       +          +T  +   +
Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFEAQEKAHTYRLSSNT 304

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CL GD+ G++ FE PV+IGDR+ FED+A Y+  + N FNGI +P++ + +  G    ++ 
Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFEDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCSLVKA 364

Query: 357 FSYNDYYNNLS 367
           F Y D+   LS
Sbjct: 365 FGYQDFKGRLS 375


>gi|225854427|ref|YP_002735939.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae JJA]
 gi|225723651|gb|ACO19504.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae JJA]
          Length = 375

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 130/371 (35%), Positives = 207/371 (55%), Gaps = 6/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+ID  KL  N     Y+++ AG K+LLA K ++ +  +  ++QY+ GTT+S LY
Sbjct: 6   VPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+F GE H +  A+KD +++ +L   D I+FN+  QL K   + ++    +GLR
Sbjct: 66  EAKLAREEFPGEVHVFAPAFKDEDMEELLGITDHIVFNSERQLRKHGARCREAGVSVGLR 125

Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +NP  S      L DP  P SR G          +  V+GL FH  CE  +       LK
Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDLLDLVDGLHFHTLCEQGADD-LQTTLK 184

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++FG ++ +++W+++GGG H T + Y V      +K   + Y+++IY+EPGEAI  N
Sbjct: 185 AVEEQFGPYLHEVKWLNMGGGHHITREGYDVDLLISEIKRIRKTYNLEIYIEPGEAIALN 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296
              L T VLDI EN   ++++D+S   H+PD L      ++          +T  +   +
Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPSLRNGFEAQEKAHTYRLSSNT 304

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CL GD+ G++ FE PV+IGDR+ F+D+A Y+  + N FNGI +P++ + +  G    ++ 
Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCSLLKA 364

Query: 357 FSYNDYYNNLS 367
           F Y D+   LS
Sbjct: 365 FGYQDFKGRLS 375


>gi|293365437|ref|ZP_06612146.1| carboxynorspermidine decarboxylase [Streptococcus oralis ATCC
           35037]
 gi|307703392|ref|ZP_07640334.1| carboxynorspermidine decarboxylase [Streptococcus oralis ATCC
           35037]
 gi|291315805|gb|EFE56249.1| carboxynorspermidine decarboxylase [Streptococcus oralis ATCC
           35037]
 gi|307622799|gb|EFO01794.1| carboxynorspermidine decarboxylase [Streptococcus oralis ATCC
           35037]
          Length = 375

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 129/371 (34%), Positives = 202/371 (54%), Gaps = 6/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+ID  KL  N      +++ AG K+LLA K ++ +  +  ++QY+ GTT+S LY
Sbjct: 6   VPTPAYVIDLAKLEENCRILQQVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+F GE H +  A+KD +++ +L   D I+FN+  QL K   + +     +GLR
Sbjct: 66  EAKLAREEFPGEVHVFAPAFKDVDMEELLEITDHIVFNSERQLRKHGPRCRDAGISVGLR 125

Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +NP  S      L DP  P SR G          +  V+GL FH  CE  +       LK
Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTLDKIPSDLLDLVDGLHFHTLCEQGADD-LQTTLK 184

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E +FG ++ +++W+++GGG H T + Y V      +K   E Y +++Y+EPGEAI  N
Sbjct: 185 AVETQFGPYLHKVKWLNMGGGHHITIEGYDVDLLISEIKRIRETYHLEVYIEPGEAIALN 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296
              L T VLDI EN   ++++D+S   H+PD L       +          +T  +   +
Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFDAREKAHTYRLSSNT 304

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CL GD+ G++ FE PV+IGD++ FED+A Y+  + N FNGI +P++ + +  G    ++ 
Sbjct: 305 CLTGDVIGDYSFENPVQIGDKLYFEDMAIYSFVKNNTFNGIGLPSLYLMDERGDCSLVKA 364

Query: 357 FSYNDYYNNLS 367
           F Y D+   LS
Sbjct: 365 FGYQDFKGRLS 375


>gi|149019507|ref|ZP_01834826.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           SP23-BS72]
 gi|168485870|ref|ZP_02710378.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           CDC1087-00]
 gi|147930882|gb|EDK81862.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           SP23-BS72]
 gi|183571011|gb|EDT91539.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           CDC1087-00]
 gi|332204923|gb|EGJ18988.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           GA47901]
          Length = 375

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 130/371 (35%), Positives = 206/371 (55%), Gaps = 6/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+ID  KL  N     Y+++ AG K+LLA K ++ +  +  ++QY+ GTT+S LY
Sbjct: 6   VPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+F GE H +  A+KD +++ +L   D I+FN+  QL K   + ++    +GLR
Sbjct: 66  EAKLAREEFPGEVHVFAPAFKDADLEELLGITDHIVFNSERQLRKHGARCREAGVSVGLR 125

Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +NP  S      L DP  P SR G          +  V+GL FH  CE  +       LK
Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDLLDLVDGLHFHTLCEQGADD-LQTTLK 184

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++FG ++ +++W+++GGG H T + Y V      +K   + Y+++IY+EPGEAI  N
Sbjct: 185 AVEEQFGPYLHEVKWLNMGGGHHITREGYDVDLLISEIKRIRKTYNLEIYIEPGEAIALN 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296
              L T VLDI EN   ++++D+S   H+PD L       +          +T  +   +
Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFEAQEKAHTYRLSSNT 304

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CL GD+ G++ FE PV+IGDR+ F+D+A Y+  + N FNGI +P++ + +  G    ++ 
Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCSLLKA 364

Query: 357 FSYNDYYNNLS 367
           F Y D+   LS
Sbjct: 365 FGYQDFKGRLS 375


>gi|254293186|ref|YP_003059209.1| carboxynorspermidine decarboxylase [Hirschia baltica ATCC 49814]
 gi|254041717|gb|ACT58512.1| carboxynorspermidine decarboxylase [Hirschia baltica ATCC 49814]
          Length = 391

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 144/377 (38%), Positives = 210/377 (55%), Gaps = 12/377 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TP +++DK  L  NL     ++  +G K+LLALK FA W    T+ +Y+ G TSSS  
Sbjct: 16  IETPVFIVDKGALEENLAILKDVQDRSGAKILLALKGFAMWSFAPTIMKYLPGVTSSSTA 75

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK---- 117
           E  LG E+FGGE HA   AY + +   +L+ CD I+FN+V+Q  +F    ++        
Sbjct: 76  EARLGAEEFGGEVHACAPAYSEADFRELLTLCDHIVFNSVNQAKRFLPIYEEAKANGGRK 135

Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175
              GLR+N     ++  L DP  P SRLG          ++ + GL FH  CE  S    
Sbjct: 136 VSFGLRVNHGHRETEVELYDPAAPKSRLGAPRDQIPTDGLEGLEGLHFHTLCELDS-DSL 194

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
              L+  E++FG  I  ++W++ GGG H T  DY V+     +K   EKY V++YLEPGE
Sbjct: 195 ERSLEVFERDFGDLIPGLKWLNFGGGHHITRPDYDVERLVHLVKRIKEKYGVEVYLEPGE 254

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAM 291
           AI   T  L T V+DI  N  ++ I+D+S  AH+PD L       I     PN   +T  
Sbjct: 255 AIAIRTGVLVTEVMDIMHNAMDIAILDTSATAHMPDVLEMPYRPDIVGGDEPNEKVHTYR 314

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-GT 350
           + G SCLAGD+ G++ F+KP++IG ++ F D+  Y + + + FNG+ +P+IA+ + D G 
Sbjct: 315 LGGLSCLAGDVVGDYSFDKPLEIGQKLIFLDMGHYTMVKTSTFNGVRLPSIAIADPDTGK 374

Query: 351 IKAIREFSYNDYYNNLS 367
           I+ +R F Y DY N LS
Sbjct: 375 IEIVRRFGYEDYKNRLS 391


>gi|168482990|ref|ZP_02707942.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           CDC1873-00]
 gi|172043345|gb|EDT51391.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           CDC1873-00]
 gi|332201385|gb|EGJ15455.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           GA47368]
          Length = 375

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 129/371 (34%), Positives = 205/371 (55%), Gaps = 6/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+ID  KL  N     Y+++  G K+LLA K ++ +  +  ++QY+ GTT+S LY
Sbjct: 6   VPTPAYVIDLAKLEANCRILQYVQEEVGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+F GE H +  A+KD +++ +L   D I+FN+  QL K   + ++    +GLR
Sbjct: 66  EAKLAREEFPGEVHVFAPAFKDEDMEELLGITDHIVFNSERQLRKHGSRCREAGVSVGLR 125

Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +NP  S      L DP  P SR G          +  V+GL FH  CE  +       LK
Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDLLDLVDGLHFHTLCEQGADD-LQTTLK 184

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++FG ++ +++W+++GGG H T + Y V      +K   + Y+++IY+EPGEAI  N
Sbjct: 185 AVEEQFGPYLHEVKWLNMGGGHHITREGYDVDLLISEIKRIRKTYNLEIYIEPGEAIALN 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296
              L T VLDI EN   ++++D+S   H+PD L       +          +T  +   +
Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFESQEKAHTYRLSSNT 304

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CL GD+ G++ FE PV+IGDR+ F+D+A Y+  + N FNGI +P++ + +  G    ++ 
Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCSLLKA 364

Query: 357 FSYNDYYNNLS 367
           F Y D+   LS
Sbjct: 365 FGYQDFKGRLS 375


>gi|224542281|ref|ZP_03682820.1| hypothetical protein CATMIT_01456 [Catenibacterium mitsuokai DSM
           15897]
 gi|224524823|gb|EEF93928.1| hypothetical protein CATMIT_01456 [Catenibacterium mitsuokai DSM
           15897]
          Length = 373

 Score =  279 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 143/371 (38%), Positives = 218/371 (58%), Gaps = 8/371 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP ++ID+ KL++NL+    + +  G K+LLA KCF+ +  +  + +Y+ GTT+S LY
Sbjct: 6   LPTPCFVIDETKLIHNLEILKEVEERTGAKILLAQKCFSCFEEYPLIGKYISGTTASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LG EK G E H Y+ AY+  +I+ +   CD I+FN+ +QL ++ +        IG+R
Sbjct: 66  EARLGKEKMGLENHVYSPAYRSQDIEELAEICDHIVFNSKAQLKRYAEVV--KDTSIGIR 123

Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           INP  S      + DP  P SR+G +  D  +   + V+GL FH  CE  S       LK
Sbjct: 124 INPECSTQVGHAIYDPCAPGSRMGIRACDFDDEIAEMVDGLHFHTLCEQNSDD-LETTLK 182

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++F  ++ Q++W+++GGG H T  DY V+   Q +    E Y +Q+YLEPGEA+  N
Sbjct: 183 AVEEKFSKWLPQMKWLNMGGGHHITRDDYDVERLIQCINHMQETYDLQVYLEPGEAVALN 242

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGRS 296
                T VLDI EN   ++I+D+S   H+PD L       +     PN   YT  +   +
Sbjct: 243 AGYNVTEVLDIVENNGKILILDTSAACHMPDVLEMPYRPPLKESGLPNELAYTYRLSCNT 302

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CLAGD+ GE+ F+  +KIGD++ FED+A Y++ + N FNGI +P+IAV + +G  + I+E
Sbjct: 303 CLAGDVIGEYSFDHEIKIGDKLYFEDMAIYSMVKTNTFNGIPLPSIAVMDQNGECRIIKE 362

Query: 357 FSYNDYYNNLS 367
           F Y D+ N LS
Sbjct: 363 FGYEDFKNRLS 373


>gi|256368792|ref|YP_003106298.1| carboxynorspermidine decarboxylase [Brucella microti CCM 4915]
 gi|255998950|gb|ACU47349.1| carboxynorspermidine decarboxylase [Brucella microti CCM 4915]
          Length = 365

 Score =  278 bits (712), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 225/367 (61%), Positives = 277/367 (75%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MI+TPYYLIDK KL  N++   Y+R+ +G K LLALKCFA W +FD +++YMDGTTSSSL
Sbjct: 1   MIQTPYYLIDKTKLKRNMEKIAYVREKSGAKALLALKCFATWSVFDLMSEYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            EV LGHEKFGGETHAY+VAY D EID V+S+ D IIFN++ QL +F DKA  +    GL
Sbjct: 61  NEVRLGHEKFGGETHAYSVAYADHEIDEVISHADKIIFNSIGQLERFADKASGIK--RGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP VS S F LADP RPFSRLGE    K+E  +  + G M HNNCEN  F  F  ML 
Sbjct: 119 RLNPGVSSSSFDLADPARPFSRLGEWDVAKVEKVMDRITGFMIHNNCENSDFSLFDRMLS 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
           +IE++FG  + ++EW+SLGGGIHFT +DYPV  FC RLK FSEK+ VQ+YLEPGEA +T 
Sbjct: 179 DIEEKFGSLLHRVEWVSLGGGIHFTGEDYPVDAFCARLKSFSEKFGVQVYLEPGEASITR 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           TTTL  TVLD   N KNL IVDSS+EAH+ D L+Y+E A + PN G ++ MVCG+SCLAG
Sbjct: 239 TTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIYREKAKMAPNKGGHSYMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGEF F+KP+ IGDR+SFED AGY + +KNWFNG+ MP IAV+ +DGT+K +REF Y 
Sbjct: 299 DIFGEFTFDKPLAIGDRLSFEDAAGYTMVKKNWFNGVKMPAIAVRELDGTVKLVREFDYA 358

Query: 361 DYYNNLS 367
           D+  +LS
Sbjct: 359 DFEGSLS 365


>gi|307127526|ref|YP_003879557.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           670-6B]
 gi|306484588|gb|ADM91457.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           670-6B]
 gi|332075533|gb|EGI86001.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           GA17545]
          Length = 375

 Score =  278 bits (712), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 129/371 (34%), Positives = 205/371 (55%), Gaps = 6/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+ID  KL  N     Y+++  G K+LLA K ++ +  +  ++QY+ GTT+S LY
Sbjct: 6   VPTPAYVIDLAKLEANCRILQYVQEEVGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+F GE H +  A+KD +++ +L   D I+FN+  QL K   + ++    +GLR
Sbjct: 66  EAKLAREEFPGEVHVFAPAFKDEDMEELLGITDHIVFNSERQLRKHGSRCREAGVSVGLR 125

Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +NP  S      L DP  P SR G          +  V+GL FH  CE  +       LK
Sbjct: 126 LNPQCSTQGAHALYDPCAPGSRFGVTIDKIPSDLLDLVDGLHFHTLCEQGADD-LQTTLK 184

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++FG ++ +++W+++GGG H T + Y V      +K   + Y+++IY+EPGEAI  N
Sbjct: 185 EVEEQFGPYLHEVKWLNMGGGHHITREGYDVDLLISEIKRIRKTYNLEIYIEPGEAIALN 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296
              L T VLDI EN   ++++D+S   H+PD L       +          +T  +   +
Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFEAQEKAHTYRLSSNT 304

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CL GD+ G++ FE PV+IGDR+ F+D+A Y+  + N FNGI +P++ + +  G    ++ 
Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCSLLKA 364

Query: 357 FSYNDYYNNLS 367
           F Y D+   LS
Sbjct: 365 FGYQDFKGRLS 375


>gi|149002465|ref|ZP_01827399.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           SP14-BS69]
 gi|237651127|ref|ZP_04525379.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae CCRI
           1974]
 gi|237821875|ref|ZP_04597720.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae CCRI
           1974M2]
 gi|147759402|gb|EDK66394.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           SP14-BS69]
 gi|332076201|gb|EGI86667.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           GA41301]
          Length = 375

 Score =  278 bits (712), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 129/371 (34%), Positives = 205/371 (55%), Gaps = 6/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+ID  KL  N     Y+++  G K+LLA K ++ +  +  ++QY+ GTT+S LY
Sbjct: 6   VPTPAYVIDLAKLEANCRILQYVQEEVGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+F GE H +  A+KD +++ +L   D I+FN+  QL K   + ++    +GLR
Sbjct: 66  EAKLAREEFPGEVHVFAPAFKDEDMEELLGITDHIVFNSERQLRKHGSRCREAGVSVGLR 125

Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +NP  S      L DP  P SR G          +  V+GL FH  CE  +       LK
Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDLLDLVDGLHFHTLCEQGADD-LQTTLK 184

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++FG ++ +++W+++GGG H T + Y V      +K   + Y+++IY+EPGEAI  N
Sbjct: 185 EVEEQFGPYLHEVKWLNMGGGHHITREGYDVDLLISEIKRIRKTYNLEIYIEPGEAIALN 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296
              L T VLDI EN   ++++D+S   H+PD L       +          +T  +   +
Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFEAQEKAHTYRLSSNT 304

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CL GD+ G++ FE PV+IGDR+ F+D+A Y+  + N FNGI +P++ + +  G    ++ 
Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCSLLKA 364

Query: 357 FSYNDYYNNLS 367
           F Y D+   LS
Sbjct: 365 FGYQDFKGRLS 375


>gi|260438735|ref|ZP_05792551.1| carboxynorspermidine decarboxylase [Butyrivibrio crossotus DSM
           2876]
 gi|292808861|gb|EFF68066.1| carboxynorspermidine decarboxylase [Butyrivibrio crossotus DSM
           2876]
          Length = 376

 Score =  278 bits (712), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 132/374 (35%), Positives = 208/374 (55%), Gaps = 11/374 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+ID+  +  N      + K  G  +LLA K F+ + ++  + +Y+ GTT+S LY
Sbjct: 6   LPTPCYVIDENIIEENCKVLADVMKKTGCHVLLAQKAFSNYALYPLIGKYLSGTTASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LG E+ G E H +  AYKD ++D ++  CD I+FN++SQL K K+K + +   IG+R
Sbjct: 66  EARLGREEMGRENHVFAPAYKDEDMDELVKICDHIVFNSISQLEKHKEKCRNVS--IGIR 123

Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +NP  S      + DP    SRLG        +++  ++GL FH  CE  S       L 
Sbjct: 124 VNPEFSTQNGHEIYDPCGKGSRLGVTADLLRNADLTGIDGLHFHTLCEQNSDD-LKKTLD 182

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++F   + +++W++ GGG H T KDY V+  C  +    EKY+V++Y+EPGEA+  N
Sbjct: 183 VVEEKFDFLLRKVKWVNFGGGHHITRKDYDVELLCDCITHIKEKYNVKVYIEPGEAVALN 242

Query: 241 TTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESAT------IYPNTGPYTAMVC 293
                TTVLD +  +    +I+D S   H+PD L    +        I      +   + 
Sbjct: 243 AGYFITTVLDKVKNSGITCLILDGSAACHMPDVLEMPYTPPLSEGSIIETPEKEFDYRLG 302

Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353
           G +CLAGDI G + F+  V+IG+R++F D+A Y++ + N FNGI +P+I   + +G  + 
Sbjct: 303 GNTCLAGDIIGNYRFDHDVQIGERLTFCDMAIYSMVKNNTFNGIPLPSIYSMDRNGDCRL 362

Query: 354 IREFSYNDYYNNLS 367
           I+ F YND+   LS
Sbjct: 363 IKSFGYNDFKERLS 376


>gi|148984662|ref|ZP_01817930.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           SP3-BS71]
 gi|147923053|gb|EDK74168.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           SP3-BS71]
 gi|301799905|emb|CBW32484.1| putative carboxynorspermidine decarboxylase [Streptococcus
           pneumoniae OXC141]
          Length = 375

 Score =  278 bits (712), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 130/371 (35%), Positives = 205/371 (55%), Gaps = 6/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+ID  KL  N     Y+++  G K+LLA K ++ +  +  ++QY+ GTT+S LY
Sbjct: 6   VPTPAYVIDLAKLEANCRILQYVQEEVGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+F GE H +  A+KD +++ +L   D I+FN+  QL K   + ++    +GLR
Sbjct: 66  EAKLAREEFPGEVHVFAPAFKDEDMEELLGITDHIVFNSERQLRKHGSRCREAGVSVGLR 125

Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +NP  S      L DP  P SR G          +  V+GL FH  CE  +       LK
Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDLLDLVDGLHFHTLCEQGADD-LQTTLK 184

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++FG ++ +++WI++GGG H T + Y V      +K   + Y+++IY+EPGEAI  N
Sbjct: 185 AVEEQFGPYLHEVKWINMGGGHHITREGYDVDLLISEIKRIRKTYNLEIYIEPGEAIALN 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296
              L T VLDI EN   ++++D+S   H+PD L       +          +T  +   +
Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFEAQEKAHTYRLSSNT 304

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CL GD+ G++ FE PV+IGDR+ F+D+A Y+  + N FNGI +P++ + +  G    ++ 
Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCSLLKA 364

Query: 357 FSYNDYYNNLS 367
           F Y D+   LS
Sbjct: 365 FGYQDFKGRLS 375


>gi|306825224|ref|ZP_07458566.1| carboxynorspermidine decarboxylase [Streptococcus sp. oral taxon
           071 str. 73H25AP]
 gi|304432660|gb|EFM35634.1| carboxynorspermidine decarboxylase [Streptococcus sp. oral taxon
           071 str. 73H25AP]
          Length = 375

 Score =  278 bits (712), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 134/371 (36%), Positives = 207/371 (55%), Gaps = 6/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+ID  KL  N     Y+++ AG K+LLA K ++ +  +  ++QY+ GTT+S LY
Sbjct: 6   VPTPAYVIDLAKLETNCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+F GE H +  A+KD +++ +L   D I+FN+  QL K   + ++    IGLR
Sbjct: 66  EAKLAREEFPGEVHVFAPAFKDADLEELLEITDHIVFNSERQLRKHGPRCREAGISIGLR 125

Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +NP  S      L DP  P SR G          +  V+GL FH  CE  +       LK
Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTSDKIPSDLLDLVDGLHFHTLCEQGADD-LETTLK 184

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E +FG ++ +++W+++GGG H T +DY V      +K   E Y++++Y+EPGEAIV N
Sbjct: 185 AVEAQFGSYLHEVKWLNMGGGHHITREDYDVDLLISEIKRIQETYNLEVYIEPGEAIVLN 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296
              L T VLDI EN   ++++D+S   H+PD L       +          +T  +   +
Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFEAKEKAHTYRLSSNT 304

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CL GD+ G++ FE PV+IGDR+ FED+A Y+  + N FNGI +P++ + +  G    ++ 
Sbjct: 305 CLTGDVIGDYSFENPVEIGDRLYFEDMAIYSFVKNNTFNGIGLPSLYLMDEQGNCSLVKA 364

Query: 357 FSYNDYYNNLS 367
           F Y D+   LS
Sbjct: 365 FGYQDFKGRLS 375


>gi|225861186|ref|YP_002742695.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298230761|ref|ZP_06964442.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae str.
           Canada MDR_19F]
 gi|298254582|ref|ZP_06978168.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae str.
           Canada MDR_19A]
 gi|298503067|ref|YP_003725007.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           TCH8431/19A]
 gi|225726871|gb|ACO22722.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298238662|gb|ADI69793.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           TCH8431/19A]
 gi|327389203|gb|EGE87548.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           GA04375]
          Length = 375

 Score =  278 bits (711), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 129/371 (34%), Positives = 205/371 (55%), Gaps = 6/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+ID  KL  N     Y+++  G K+LLA K ++ +  +  ++QY+ GTT+S LY
Sbjct: 6   VPTPAYVIDLAKLEANCRILQYVQEEVGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+F GE H +  A+KD +++ +L   D I+FN+  QL K   + ++    +GLR
Sbjct: 66  EAKLAREEFPGEVHVFAPAFKDADLEELLGITDHIVFNSERQLRKHGARCREAGVSVGLR 125

Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +NP  S      L DP  P SR G          +  V+GL FH  CE  +       LK
Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDLLDLVDGLHFHTLCEQGADD-LQTTLK 184

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++FG ++ +++W+++GGG H T + Y V      +K   + Y+++IY+EPGEAI  N
Sbjct: 185 AVEEQFGPYLHEVKWLNMGGGHHITREGYDVDLLISEIKRIRKTYNLEIYIEPGEAIALN 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296
              L T VLDI EN   ++++D+S   H+PD L       +          +T  +   +
Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFESQEKAHTYRLSSNT 304

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CL GD+ G++ FE PV+IGDR+ F+D+A Y+  + N FNGI +P++ + +  G    ++ 
Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCSLLKA 364

Query: 357 FSYNDYYNNLS 367
           F Y D+   LS
Sbjct: 365 FGYQDFKGRLS 375


>gi|149006405|ref|ZP_01830117.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           SP18-BS74]
 gi|147762182|gb|EDK69144.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           SP18-BS74]
          Length = 375

 Score =  278 bits (711), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 129/371 (34%), Positives = 206/371 (55%), Gaps = 6/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+ID  KL  N     Y+++  G K+LLA K ++ +  +  ++QY+ GTT+S LY
Sbjct: 6   VPTPAYVIDLAKLEANCRILQYVQEEVGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+F GE H +  A+KD +++ +L   D I+FN+  QL K   + ++    +GLR
Sbjct: 66  EAKLAREEFPGEVHVFAPAFKDADLEELLEIMDHIVFNSERQLRKHGPRCREAGVSVGLR 125

Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +NP  S      L DP  P SR G          +  V+GL FH  CE  +       LK
Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDLLDLVDGLHFHTLCEQGADD-LQTTLK 184

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++FG ++ +++W+++GGG H T + Y V      +K   + Y+++IY+EPGEAI  N
Sbjct: 185 AVEEQFGPYLHEVKWLNMGGGHHITREGYDVDLLISEIKRIRKTYNLEIYIEPGEAIALN 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296
              L T VLDI EN   ++++D+S   H+PD L      ++          +T  +   +
Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPSLRNGFEAQEKAHTYRLSSNT 304

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CL GD+ G++ FE PV+IGDR+ F+D+A Y+  + N FNGI +P++ + +  G    ++ 
Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCSLLKA 364

Query: 357 FSYNDYYNNLS 367
           F Y D+   LS
Sbjct: 365 FGYQDFKGRLS 375


>gi|148559900|ref|YP_001258372.1| carboxynorspermidine decarboxylase [Brucella ovis ATCC 25840]
 gi|148371157|gb|ABQ61136.1| carboxynorspermidine decarboxylase [Brucella ovis ATCC 25840]
          Length = 365

 Score =  278 bits (711), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 226/367 (61%), Positives = 277/367 (75%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MI+TPYYLIDK KL  N++   Y+R+ +G K LLALKCFA W +FD +++YMDGTTSSSL
Sbjct: 1   MIQTPYYLIDKTKLKRNMEKIAYVREKSGAKALLALKCFATWSVFDLMSEYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            EV LGHEKFGGETHAY+VAY D EID V+S+ D IIFN++ QL +F DKA  +    GL
Sbjct: 61  NEVRLGHEKFGGETHAYSVAYADHEIDEVISHADKIIFNSIGQLERFADKASGIK--RGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP VS S F LADP RPFSRLGE    K+E  +  + G M HNNCEN  F  F  ML 
Sbjct: 119 RLNPGVSSSSFDLADPARPFSRLGEWDVAKVEKVMDRITGFMIHNNCENSDFSLFDRMLS 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
           +IE++FG  + +IEW+SLGGGIHFT +DYPV  FC RLK FSEK+ VQ+YLEPGEA +T 
Sbjct: 179 DIEEKFGSLLHRIEWVSLGGGIHFTGEDYPVDAFCARLKSFSEKFGVQVYLEPGEASITR 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           TTTL  TVLD   N KNL IVDSS+EAH+ D L+Y+E A + PN G ++ MVCG+SCLAG
Sbjct: 239 TTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIYREKAKMAPNNGGHSYMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGEF F+KP+ IGDR+SFED AGY + +KNWFNG+ MP IAV+ +DGT+K +REF Y 
Sbjct: 299 DIFGEFTFDKPLAIGDRLSFEDAAGYTMVKKNWFNGVKMPAIAVRELDGTVKLVREFDYA 358

Query: 361 DYYNNLS 367
           D+  +LS
Sbjct: 359 DFEGSLS 365


>gi|322420302|ref|YP_004199525.1| carboxynorspermidine decarboxylase [Geobacter sp. M18]
 gi|320126689|gb|ADW14249.1| carboxynorspermidine decarboxylase [Geobacter sp. M18]
          Length = 384

 Score =  278 bits (711), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 124/372 (33%), Positives = 205/372 (55%), Gaps = 8/372 (2%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P +++D  +L +NL     ++K +G K+LLALK F+ W +F  + + + G  +SS +E
Sbjct: 14  PSPAFVVDLGRLRHNLAILDEVQKRSGAKILLALKAFSMWSVFPIIEKTLHGICASSPWE 73

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHKKIGL 120
             LG E+FGGE H+++ A+K+ ++  +L+  + ++FN+ +QL +F    +       IGL
Sbjct: 74  ARLGREEFGGEVHSFSAAFKESDVAELLTTSNHLVFNSFNQLERFRSMWEEYAGRVSIGL 133

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP  S     + DP  P SRLG    +     +  V GL FH  CE   F       K
Sbjct: 134 RVNPGHSEGHTPIYDPAAPKSRLGILRSEFEGRSLAGVEGLHFHTLCEQL-FDPLERTAK 192

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
             E++FG F+ +++W++LGGG H T + Y +    + ++ F  KY +++YLEPGEAI   
Sbjct: 193 VFEEQFGEFLPRMKWLNLGGGHHITREGYDIDALVELVRYFRRKYDLEVYLEPGEAIAIG 252

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGRS 296
           T  L + VLD+  N  ++ ++D S   H+PD L       I     P    +   + G S
Sbjct: 253 TGILVSEVLDVVHNEVDIAVLDVSATCHMPDILEMPYRPEIQNGYLPGEKGHDYRLGGPS 312

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTIKAIR 355
           CLAGD+ G++ F+  + IG++++F D++ Y + +   FNGI +P I       G ++ +R
Sbjct: 313 CLAGDVIGDWSFDHRLAIGEKLAFLDMSHYTMVKTTTFNGIQLPHICTYEPQTGELRVVR 372

Query: 356 EFSYNDYYNNLS 367
            F Y D+ N LS
Sbjct: 373 SFGYEDFKNRLS 384


>gi|270292720|ref|ZP_06198931.1| carboxynorspermidine decarboxylase [Streptococcus sp. M143]
 gi|270278699|gb|EFA24545.1| carboxynorspermidine decarboxylase [Streptococcus sp. M143]
          Length = 375

 Score =  278 bits (711), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 132/371 (35%), Positives = 206/371 (55%), Gaps = 6/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+ID  KL  N     Y+++ AG K+LLA K ++ +  +  ++QY+ GTT+S LY
Sbjct: 6   VPTPAYVIDLAKLEANCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+F GE H +  A+KD +++ +L   D I+FN+  QL K   + +     +GLR
Sbjct: 66  EAKLAREEFPGEVHVFAPAFKDADLEELLEITDHIVFNSERQLRKHGARCRAAGISVGLR 125

Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +NP  S      L DP  P SR G          +  V+GL FH  CE  +       LK
Sbjct: 126 LNPRCSTQGDHALYDPCAPGSRFGVTLDKIPSDLLDLVDGLHFHTLCEQGADD-LETTLK 184

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++FG ++ +++W+++GGG H T +DY V      +K   E Y++++Y+EPGEAI  N
Sbjct: 185 AVEEQFGPYLHEVKWLNMGGGHHITREDYDVDLLISEIKRIRETYNLEVYIEPGEAIALN 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296
              L T VLDI EN   ++++D+S   H+PD L       +          +T  +   +
Sbjct: 245 AGYLATKVLDIVENSMEILVLDASATCHMPDVLEMPYRPPLRNGFEAQEKIHTYRLSSNT 304

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CL GD+ G++ FE PV+IGDR+ FED+A Y+  + N FNGI +P++ + +  G    ++ 
Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFEDMAIYSFVKNNTFNGIGLPSLYLMDERGDCSLVKA 364

Query: 357 FSYNDYYNNLS 367
           F Y D+   LS
Sbjct: 365 FGYQDFKGRLS 375


>gi|169833511|ref|YP_001694373.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           Hungary19A-6]
 gi|225858718|ref|YP_002740228.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae 70585]
 gi|168996013|gb|ACA36625.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           Hungary19A-6]
 gi|225722120|gb|ACO17974.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae 70585]
          Length = 375

 Score =  278 bits (711), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 129/371 (34%), Positives = 205/371 (55%), Gaps = 6/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+ID  KL  N     Y+++  G K+LLA K ++ +  +  ++QY+ GTT+S LY
Sbjct: 6   VPTPAYVIDLAKLEANCRILQYVQEEVGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+F GE H +  A+KD +++ +L   D I+FN+  QL K   + ++    +GLR
Sbjct: 66  EAKLAREEFPGEVHVFAPAFKDADLEELLGITDHIVFNSERQLRKHGARCREAGVSVGLR 125

Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +NP  S      L DP  P SR G          +  V+GL FH  CE  +       LK
Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDLLDLVDGLHFHTLCEQGADD-LQTTLK 184

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++FG ++ +++W+++GGG H T + Y V      +K   + Y+++IY+EPGEAI  N
Sbjct: 185 AVEEQFGPYLHEVKWLNMGGGHHITREGYDVDLLISEIKRIRKTYNLEIYIEPGEAIALN 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296
              L T VLDI EN   ++++D+S   H+PD L       +          +T  +   +
Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFEAQEKAHTYRLSSNT 304

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CL GD+ G++ FE PV+IGDR+ F+D+A Y+  + N FNGI +P++ + +  G    ++ 
Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCSLLKA 364

Query: 357 FSYNDYYNNLS 367
           F Y D+   LS
Sbjct: 365 FGYQDFKGRLS 375


>gi|150019219|ref|YP_001311473.1| carboxynorspermidine decarboxylase [Clostridium beijerinckii NCIMB
           8052]
 gi|149905684|gb|ABR36517.1| carboxynorspermidine decarboxylase [Clostridium beijerinckii NCIMB
           8052]
          Length = 379

 Score =  278 bits (711), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 139/372 (37%), Positives = 221/372 (59%), Gaps = 8/372 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P YL+D++ L  NL+T  Y++K  G  ++LA K F+ +  F  + +Y+ G TSSSL+
Sbjct: 9   LPSPCYLVDERLLKKNLETLDYVQKETGANIILATKAFSMYSTFPLIGRYLKGVTSSSLH 68

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK---LHKKI 118
           E  LG+E+ G E H Y+ AY++ E D ++   D I+FN+ SQ  K+KDK +       + 
Sbjct: 69  EARLGYEEMGKEVHIYSPAYREDEFDEIMKYSDHIVFNSFSQWRKYKDKVKNFKGKKIEC 128

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
            +RINP  S  +  + +P    SR+G    +  E +I+ ++GL FH  CE  S       
Sbjct: 129 AIRINPEYSEIETDIYNPCFENSRMGVTLANFEEEDIEGIDGLHFHTMCEQNS-DTLERT 187

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
           +K ++++FG +I +++WI+ GGG H T +DY ++   + +K   +KY VQ+YLEPGEAI 
Sbjct: 188 IKVVDEKFGKYIKKMKWINFGGGHHITREDYDIETLIKSIKFIKDKYGVQVYLEPGEAIA 247

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----YTAMVCG 294
            NT  L +TVLD  +N  ++ I+D+S E H+PD L       I     P    +T    G
Sbjct: 248 LNTGFLVSTVLDTMKNGMDIAILDTSAECHMPDVLAMPYRPNIIGAGKPNEFEFTYRFGG 307

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            +CLAGDI G++ F++P+K GD++ F D+A Y++ + N FNG+N+P I   + +  I+ I
Sbjct: 308 PTCLAGDIIGDYSFKEPLKPGDKLVFCDMAIYSMVKNNTFNGVNLPAIVKYSEEKGIEVI 367

Query: 355 REFSYNDYYNNL 366
           +EF Y D+   L
Sbjct: 368 KEFGYEDFKARL 379


>gi|77919691|ref|YP_357506.1| carboxynorspermidine decarboxylase [Pelobacter carbinolicus DSM
           2380]
 gi|77545774|gb|ABA89336.1| carboxynorspermidine decarboxylase [Pelobacter carbinolicus DSM
           2380]
          Length = 397

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 136/371 (36%), Positives = 204/371 (54%), Gaps = 8/371 (2%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y++D  +L +NL+    ++K +G K+LLALK FA W  F  + Q + G  +SS +E
Sbjct: 27  PSPAYVVDLGRLRHNLEILDQVQKRSGAKILLALKAFALWKTFPLIRQTLHGVCASSPWE 86

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGL 120
             LG E+FG E H++  A+K+ ++  +L   + ++FN+ +QL +F+   +K      IGL
Sbjct: 87  ARLGREEFGREVHSFAAAFKESDVVELLGISNHLVFNSFAQLERFRPLWEKEKGRVSIGL 146

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           RINP  S     L DP  P SRLG    +     +  V GL FH  CE   +   +    
Sbjct: 147 RINPEHSEGHTALYDPCAPGSRLGIPRAEFEGKSLDGVEGLHFHTLCEQL-YEPLARTAA 205

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++FG F+ Q++W + GGG H T + Y +    + +K F  KY VQ+YLEPGEAI   
Sbjct: 206 VVEEKFGSFLPQMKWFNFGGGHHITREGYDIDSLVELIKYFQGKYGVQVYLEPGEAIAIG 265

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296
           T  L + VLD+  N  +  I+D S   H+PD L       IY        P T  + G S
Sbjct: 266 TGLLVSEVLDVVHNRVDTAILDVSATCHMPDVLEMPYRPDIYGGFDAGAKPCTYRLGGPS 325

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-GTIKAIR 355
           CLAGD+ G++ FE+P+  G R++F D+A Y + +   FNGI+ P+I     D G ++ +R
Sbjct: 326 CLAGDVIGDWSFEEPLHAGQRLAFLDMAHYTMVKTTTFNGIHHPSICTYEPDTGELEVLR 385

Query: 356 EFSYNDYYNNL 366
            F Y D+ N L
Sbjct: 386 HFDYEDFRNRL 396


>gi|182418088|ref|ZP_02949391.1| carboxynorspermidine decarboxylase [Clostridium butyricum 5521]
 gi|237667715|ref|ZP_04527699.1| carboxynorspermidine decarboxylase [Clostridium butyricum E4 str.
           BoNT E BL5262]
 gi|182378057|gb|EDT75594.1| carboxynorspermidine decarboxylase [Clostridium butyricum 5521]
 gi|237656063|gb|EEP53619.1| carboxynorspermidine decarboxylase [Clostridium butyricum E4 str.
           BoNT E BL5262]
          Length = 381

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 131/373 (35%), Positives = 222/373 (59%), Gaps = 8/373 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P Y++D++ L  NL+   Y++K +G  ++LA K F+ +  F  + +Y+ G TSSSL+
Sbjct: 10  LPSPCYIVDERLLRKNLEVLDYVQKESGANIILATKAFSMFSTFPLIGKYLKGVTSSSLF 69

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK---KI 118
           E  LG+E+ G + H ++ AY++ E + ++   D IIFN+ +Q   +KD+ +       + 
Sbjct: 70  EARLGYEEMGKQVHIFSPAYREDEFEDIMKYSDHIIFNSFNQWKLYKDRVKNYKDKKIQC 129

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
           G+RINP  S  +  + +P    SR+G   K+  E+++  ++GL FH  CE  S    +  
Sbjct: 130 GIRINPEYSEIETDIYNPCFENSRMGVTLKNFEENDLDGIDGLHFHTMCEQNS-DTLART 188

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
           +K ++ +FG +I  ++W++ GGG H T  DY +K   + +     KY+++IYLEPGEA+ 
Sbjct: 189 IKVVDDKFGKYIKNMKWLNFGGGHHITRDDYDLKTLIESVLYMKNKYNIEIYLEPGEAVA 248

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCG 294
            N+  L +TVLDI+ N  ++ I+D+S   H+PD L       I     P    YT    G
Sbjct: 249 LNSGFLVSTVLDITNNGMDIAILDTSAACHMPDVLEMPYRPNIIGSGKPYEYEYTYRFGG 308

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            +CLAGDI G++ F++P+K+GD++ F D+A Y++ + N FNGIN+P+I   + +  ++ I
Sbjct: 309 PTCLAGDIIGDYSFKEPLKVGDKLIFCDMAIYSMVKNNTFNGINLPSIVKYSEENGVEII 368

Query: 355 REFSYNDYYNNLS 367
           +EF Y D+   LS
Sbjct: 369 KEFGYEDFKGRLS 381


>gi|307708674|ref|ZP_07645137.1| carboxynorspermidine decarboxylase [Streptococcus mitis NCTC 12261]
 gi|307615248|gb|EFN94458.1| carboxynorspermidine decarboxylase [Streptococcus mitis NCTC 12261]
          Length = 375

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 133/371 (35%), Positives = 207/371 (55%), Gaps = 6/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+ID  KL  N     Y+++ AG K+LLA K ++ +  +  ++QY+ GTT+S LY
Sbjct: 6   VPTPAYVIDLPKLEGNCRILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+F GE H +  A+KD +++ +L   + I+FN+  QL K   + +     +GLR
Sbjct: 66  EAKLAREEFPGEVHVFAPAFKDADLEELLEITNHIVFNSERQLRKHGARCRDAGVSVGLR 125

Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +NP  S      L DP  P SR G          +  V+GL FH  CE  +       LK
Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTSDKIPSDLLDLVDGLHFHTLCEQGADD-LETTLK 184

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++FG ++ Q++W+++GGG H T +DY V      +K   E Y+++IY+EPGEAI  N
Sbjct: 185 AVEEQFGAYLHQVKWLNMGGGHHITREDYDVDLLISEIKRIRETYNLEIYIEPGEAIALN 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296
              L T VLDI EN   ++++D+S   H+PD L       +          +T  +   +
Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFAAQEKAHTYRLSSNT 304

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CL GD+ G++ FE PV+IGDR+ FED+A Y+  + N FNGI +P++ + +  G  + ++ 
Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFEDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCRLVKS 364

Query: 357 FSYNDYYNNLS 367
           F Y D+   LS
Sbjct: 365 FGYQDFKGRLS 375


>gi|306842400|ref|ZP_07475054.1| carboxynorspermidine decarboxylase [Brucella sp. BO2]
 gi|306287464|gb|EFM58937.1| carboxynorspermidine decarboxylase [Brucella sp. BO2]
          Length = 365

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 225/367 (61%), Positives = 277/367 (75%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MI+TPYYLIDK KL  N++   Y+R+ +G K LLALKCFA W +FD +++YMDGTTSSSL
Sbjct: 1   MIQTPYYLIDKTKLKRNMEKIAYVREKSGAKALLALKCFATWSVFDLMSEYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            EV LGHEKFGGETHAY+VAY D EID V+S+ D IIFN++ QL +F DKA  +    GL
Sbjct: 61  NEVRLGHEKFGGETHAYSVAYADHEIDEVISHADKIIFNSIGQLERFADKASGIK--RGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP VS S F LADP RPFSRLGE    K+E  +  + G M HNNCEN  F  F  ML 
Sbjct: 119 RLNPGVSSSSFDLADPARPFSRLGEWDVAKVEKVMNRITGFMIHNNCENSDFSLFDRMLS 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
           +IE++FG  + ++EW+SLGGGIHFT +DYPV  FC RLK FSEK+ VQ+YLEPGEA +T 
Sbjct: 179 DIEEKFGSLLHRVEWVSLGGGIHFTGEDYPVDAFCARLKSFSEKFGVQVYLEPGEASITR 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           TTTL  TVLD   N KNL IVDSS+EAH+ D L+Y+E A + PN G ++ MVCG+SCLAG
Sbjct: 239 TTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIYREKAKMAPNNGGHSYMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGEF F+KP+ IGDR+SFED AGY + +KNWFNG+ MP IAV+ +DGT+K +REF Y 
Sbjct: 299 DIFGEFTFDKPLAIGDRLSFEDAAGYTMVKKNWFNGVKMPAIAVRELDGTVKLVREFDYA 358

Query: 361 DYYNNLS 367
           D+  +LS
Sbjct: 359 DFEGSLS 365


>gi|62289327|ref|YP_221120.1| carboxynorspermidine decarboxylase [Brucella abortus bv. 1 str.
           9-941]
 gi|82699256|ref|YP_413830.1| carboxynorspermidine decarboxylase [Brucella melitensis biovar
           Abortus 2308]
 gi|163842622|ref|YP_001627026.1| carboxynorspermidine decarboxylase [Brucella suis ATCC 23445]
 gi|189023580|ref|YP_001934348.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus S19]
 gi|237814818|ref|ZP_04593816.1| carboxynorspermidine decarboxylase [Brucella abortus str. 2308 A]
 gi|254688645|ref|ZP_05151899.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus bv. 6 str.
           870]
 gi|254693126|ref|ZP_05154954.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus bv. 3 str.
           Tulya]
 gi|254696768|ref|ZP_05158596.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254701152|ref|ZP_05162980.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella suis bv. 5 str. 513]
 gi|254707928|ref|ZP_05169756.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella pinnipedialis
           M163/99/10]
 gi|254709494|ref|ZP_05171305.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella pinnipedialis B2/94]
 gi|254729677|ref|ZP_05188255.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus bv. 4 str.
           292]
 gi|256030988|ref|ZP_05444602.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella pinnipedialis
           M292/94/1]
 gi|256060478|ref|ZP_05450649.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella neotomae 5K33]
 gi|256256892|ref|ZP_05462428.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus bv. 9 str.
           C68]
 gi|260545919|ref|ZP_05821660.1| orn/DAP/Arg decarboxylase, family 2 [Brucella abortus NCTC 8038]
 gi|260754119|ref|ZP_05866467.1| carboxynorspermidine decarboxylase [Brucella abortus bv. 6 str.
           870]
 gi|260757339|ref|ZP_05869687.1| carboxynorspermidine decarboxylase [Brucella abortus bv. 4 str.
           292]
 gi|260761163|ref|ZP_05873506.1| carboxynorspermidine decarboxylase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260883144|ref|ZP_05894758.1| carboxynorspermidine decarboxylase [Brucella abortus bv. 9 str.
           C68]
 gi|261213365|ref|ZP_05927646.1| carboxynorspermidine decarboxylase [Brucella abortus bv. 3 str.
           Tulya]
 gi|261315417|ref|ZP_05954614.1| carboxynorspermidine decarboxylase [Brucella pinnipedialis
           M163/99/10]
 gi|261317018|ref|ZP_05956215.1| carboxynorspermidine decarboxylase [Brucella pinnipedialis B2/94]
 gi|261324471|ref|ZP_05963668.1| carboxynorspermidine decarboxylase [Brucella neotomae 5K33]
 gi|261751688|ref|ZP_05995397.1| carboxynorspermidine decarboxylase [Brucella suis bv. 5 str. 513]
 gi|265988055|ref|ZP_06100612.1| carboxynorspermidine decarboxylase [Brucella pinnipedialis
           M292/94/1]
 gi|294851721|ref|ZP_06792394.1| carboxynorspermidine decarboxylase [Brucella sp. NVSL 07-0026]
 gi|297247743|ref|ZP_06931461.1| carboxynorspermidine decarboxylase [Brucella abortus bv. 5 str.
           B3196]
 gi|62195459|gb|AAX73759.1| NspC, carboxynorspermidine decarboxylase [Brucella abortus bv. 1
           str. 9-941]
 gi|82615357|emb|CAJ10319.1| Orn/DAP/Arg decarboxylase, family 2:Carboxynorspermidine
           decarboxylase [Brucella melitensis biovar Abortus 2308]
 gi|163673345|gb|ABY37456.1| carboxynorspermidine decarboxylase [Brucella suis ATCC 23445]
 gi|189019152|gb|ACD71874.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus S19]
 gi|237789655|gb|EEP63865.1| carboxynorspermidine decarboxylase [Brucella abortus str. 2308 A]
 gi|260097326|gb|EEW81201.1| orn/DAP/Arg decarboxylase, family 2 [Brucella abortus NCTC 8038]
 gi|260667657|gb|EEX54597.1| carboxynorspermidine decarboxylase [Brucella abortus bv. 4 str.
           292]
 gi|260671595|gb|EEX58416.1| carboxynorspermidine decarboxylase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260674227|gb|EEX61048.1| carboxynorspermidine decarboxylase [Brucella abortus bv. 6 str.
           870]
 gi|260872672|gb|EEX79741.1| carboxynorspermidine decarboxylase [Brucella abortus bv. 9 str.
           C68]
 gi|260914972|gb|EEX81833.1| carboxynorspermidine decarboxylase [Brucella abortus bv. 3 str.
           Tulya]
 gi|261296241|gb|EEX99737.1| carboxynorspermidine decarboxylase [Brucella pinnipedialis B2/94]
 gi|261300451|gb|EEY03948.1| carboxynorspermidine decarboxylase [Brucella neotomae 5K33]
 gi|261304443|gb|EEY07940.1| carboxynorspermidine decarboxylase [Brucella pinnipedialis
           M163/99/10]
 gi|261741441|gb|EEY29367.1| carboxynorspermidine decarboxylase [Brucella suis bv. 5 str. 513]
 gi|264660252|gb|EEZ30513.1| carboxynorspermidine decarboxylase [Brucella pinnipedialis
           M292/94/1]
 gi|294820310|gb|EFG37309.1| carboxynorspermidine decarboxylase [Brucella sp. NVSL 07-0026]
 gi|297174912|gb|EFH34259.1| carboxynorspermidine decarboxylase [Brucella abortus bv. 5 str.
           B3196]
          Length = 365

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 225/367 (61%), Positives = 277/367 (75%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MI+TPYYLIDK KL  N++   Y+R+ +G K LLALKCFA W +FD +++YMDGTTSSSL
Sbjct: 1   MIQTPYYLIDKTKLKRNMEKIAYVREKSGAKALLALKCFATWSVFDLMSEYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            EV LGHEKFGGETHAY+VAY D EID V+S+ D IIFN++ QL +F DKA  +    GL
Sbjct: 61  NEVRLGHEKFGGETHAYSVAYADHEIDEVISHADKIIFNSIGQLERFADKASGIK--RGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP VS S F LADP RPFSRLGE    K+E  +  + G M HNNCEN  F  F  ML 
Sbjct: 119 RLNPGVSSSSFDLADPARPFSRLGEWDVAKVEKVMDRITGFMIHNNCENSDFSLFDRMLS 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
           +IE++FG  + ++EW+SLGGGIHFT +DYPV  FC RLK FSEK+ VQ+YLEPGEA +T 
Sbjct: 179 DIEEKFGSLLHRVEWVSLGGGIHFTGEDYPVDAFCARLKSFSEKFGVQVYLEPGEASITR 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           TTTL  TVLD   N KNL IVDSS+EAH+ D L+Y+E A + PN G ++ MVCG+SCLAG
Sbjct: 239 TTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIYREKAKMAPNNGGHSYMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGEF F+KP+ IGDR+SFED AGY + +KNWFNG+ MP IAV+ +DGT+K +REF Y 
Sbjct: 299 DIFGEFTFDKPLAIGDRLSFEDAAGYTMVKKNWFNGVKMPAIAVRELDGTVKLVREFDYA 358

Query: 361 DYYNNLS 367
           D+  +LS
Sbjct: 359 DFEGSLS 365


>gi|169828941|ref|YP_001699099.1| hypothetical protein Bsph_3481 [Lysinibacillus sphaericus C3-41]
 gi|168993429|gb|ACA40969.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41]
          Length = 379

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 142/372 (38%), Positives = 219/372 (58%), Gaps = 7/372 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P Y++D++ L  NL+    I+   G ++LLALK F+    F  + +Y+ G T+SSL+
Sbjct: 9   VPSPSYVVDERLLTKNLELLKSIQDRTGCRILLALKGFSMHSTFPLVGEYLAGITASSLH 68

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIG 119
           E  LG+EK G E H Y  AY + E+D +L   D I+FN+ +Q  +FKDK +      + G
Sbjct: 69  EARLGYEKMGKEVHVYAPAYIEHEMDELLGYVDHIVFNSFNQWAQFKDKVKSAGKTIECG 128

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +R+NP  S  +  L DP    SRLG    +  +S++  ++GL FH  CE  S      ++
Sbjct: 129 IRVNPEYSEIETALYDPCYTNSRLGTTLANFDKSQLDGIDGLHFHAMCEQNS-DTLERII 187

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
           + +E++FG  + Q++W++ GGG H T +DY V+     +    EKY++ +YLEPGEA+  
Sbjct: 188 EVVEEKFGDVLHQMKWLNFGGGHHITREDYDVEKLVNIINYIQEKYNLLVYLEPGEAVAL 247

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGR 295
           NT  L  TVLDI +N  +L I+D+S   H+PD L       I      N   +T  + G 
Sbjct: 248 NTGYLVATVLDIQKNGMDLAILDTSATCHMPDVLEMPYRPMIIGSGQANEFAHTYRLGGL 307

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           +CLAGD+ G++ FE+P+K GDR+ F D+A Y++ + + FNG+N+P+I   N +  IK IR
Sbjct: 308 TCLAGDVIGDYSFEQPLKPGDRLVFTDMAHYSMVKNHMFNGVNLPSIVSYNDEEGIKIIR 367

Query: 356 EFSYNDYYNNLS 367
           EF + DY   LS
Sbjct: 368 EFKFEDYSGRLS 379


>gi|134094073|ref|YP_001099148.1| putative carboxynorspermide decarboxylase [Herminiimonas
           arsenicoxydans]
 gi|55977154|gb|AAV68371.1| putative carboxynorspermide decarboxylase [Herminiimonas
           arsenicoxydans]
 gi|133737976|emb|CAL61021.1| Carboxynorspermidine decarboxylase [Herminiimonas arsenicoxydans]
          Length = 365

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 204/367 (55%), Positives = 268/367 (73%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MI TPYYLIDK  LL NL     +R+ +G K+LLALKCFA W +FD + QYMDGTTSSSL
Sbjct: 1   MISTPYYLIDKSALLRNLQVIDQVRERSGAKVLLALKCFATWSVFDLMQQYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           YEV LGH+KFGGETHAY+VA+ D EID V+++CD IIFN++SQ  +F   A       GL
Sbjct: 61  YEVKLGHQKFGGETHAYSVAFADHEIDEVVAHCDKIIFNSISQFQRFSSHAGNKP--KGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP VS + F LADP RPFSRLGE    +I S I  ++G+M HNNCEN+ F  F A+L 
Sbjct: 119 RLNPGVSCASFDLADPARPFSRLGESDPARILSIIDQLDGVMIHNNCENRDFERFDALLT 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E+ +G  + ++ W+SLGGGI FT   Y +  FC+RL+ F++ Y VQ+YLEPGEA V +
Sbjct: 179 EVEQRYGEILHRLSWVSLGGGISFTTPGYSIDAFCERLRRFAQTYDVQVYLEPGEATVRD 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           TTTL  +V+DI  N KNL +VDSS EAH+ D L+Y+E+A I    G +   +CG++CLAG
Sbjct: 239 TTTLEVSVVDIGFNGKNLAVVDSSTEAHMLDLLIYRETAPIKNAQGDHAYQICGKTCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGE  FE+P++IGDRIS  D  GY + +KNWFNG++MP IA+K  DG+++A+REFS++
Sbjct: 299 DIFGEARFEQPLQIGDRISIGDAGGYTMVKKNWFNGVHMPAIAIKEADGSVRAVREFSFD 358

Query: 361 DYYNNLS 367
           DY ++LS
Sbjct: 359 DYVSSLS 365


>gi|260432794|ref|ZP_05786765.1| carboxynorspermidine decarboxylase [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260416622|gb|EEX09881.1| carboxynorspermidine decarboxylase [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 389

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 127/368 (34%), Positives = 202/368 (54%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P +++D++ +  NL     I + +G  +L ALK F+ + +   + QY+ GT +S +Y
Sbjct: 23  VPSPCFVVDEKAVEKNLRILAEIGERSGAHVLSALKAFSMFALAPVVRQYLGGTCASGIY 82

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LG E++GGE   +   YKD +ID +L+  D IIFN+ +Q ++F  KAQ   +++GLR
Sbjct: 83  EARLGREEYGGEVATFCAGYKDSDIDEILALSDHIIFNSPAQKDRFLPKAQAAGRQVGLR 142

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP  S  +    DP  P SRLG          ++ V+GL  H  CE   F   +     
Sbjct: 143 INPEHSEGEVAKYDPCAPCSRLGTPVSQLDAKALEGVDGLHMHTLCEQG-FEPLARTWAA 201

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           +E +   F+  ++W++ GGG H T  DY        +K    KY V+IYLEPGEA+  + 
Sbjct: 202 VEPKLAPFLNDLKWLNFGGGHHITRSDYDRDGLVDFIKHIRAKYGVEIYLEPGEAVALDA 261

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN-TGPYTAMVCGRSCLAG 300
             L   +LD+  N  +L I D S   H+PD +       +       +T  + G SCLAG
Sbjct: 262 GILVGEILDLPHNGMDLAITDISATCHMPDVIEAPYRPALMDEAETGHTYRLGGPSCLAG 321

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-GTIKAIREFSY 359
           D+ G++ + +P++IG R +F D A Y++ + N FNG+ +PTIA+ N +   +K I++F Y
Sbjct: 322 DVIGDYTWAEPLQIGQRFAFLDQAHYSMVKTNTFNGVPLPTIALWNSETDDLKIIKQFGY 381

Query: 360 NDYYNNLS 367
           +D+   LS
Sbjct: 382 DDFKERLS 389


>gi|17987872|ref|NP_540506.1| carboxynorspermidine decarboxylase [Brucella melitensis bv. 1 str.
           16M]
 gi|225851878|ref|YP_002732111.1| carboxynorspermidine decarboxylase [Brucella melitensis ATCC 23457]
 gi|256044058|ref|ZP_05446969.1| carboxynorspermidine decarboxylase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256264609|ref|ZP_05467141.1| orn/DAP/Arg decarboxylase [Brucella melitensis bv. 2 str. 63/9]
 gi|260563419|ref|ZP_05833905.1| orn/DAP/Arg decarboxylase, family 2 [Brucella melitensis bv. 1 str.
           16M]
 gi|265990472|ref|ZP_06103029.1| carboxynorspermidine decarboxylase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|17983604|gb|AAL52770.1| carboxynorspermidine decarboxylase [Brucella melitensis bv. 1 str.
           16M]
 gi|225640243|gb|ACO00157.1| carboxynorspermidine decarboxylase [Brucella melitensis ATCC 23457]
 gi|260153435|gb|EEW88527.1| orn/DAP/Arg decarboxylase, family 2 [Brucella melitensis bv. 1 str.
           16M]
 gi|263001256|gb|EEZ13831.1| carboxynorspermidine decarboxylase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263094973|gb|EEZ18681.1| orn/DAP/Arg decarboxylase [Brucella melitensis bv. 2 str. 63/9]
 gi|326408376|gb|ADZ65441.1| carboxynorspermidine decarboxylase [Brucella melitensis M28]
 gi|326538091|gb|ADZ86306.1| carboxynorspermidine decarboxylase [Brucella melitensis M5-90]
          Length = 365

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 225/367 (61%), Positives = 278/367 (75%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MI+TPYYLIDK KL  N++   Y+R+ +G K LLALKCFA W +FD +++YMDGTTSSSL
Sbjct: 1   MIQTPYYLIDKTKLKRNMEKIAYVREKSGAKALLALKCFATWSVFDLMSEYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            EV LGHEKFGGETHAY+VAY D EID V+S+ D IIFN++ QL +F DKA  +    GL
Sbjct: 61  NEVRLGHEKFGGETHAYSVAYADHEIDEVISHADKIIFNSIGQLERFADKASGIK--RGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP VS S F LADP RPFSRLGE    K+E+ +  + G M HNNCEN  F  F  ML 
Sbjct: 119 RLNPGVSSSSFDLADPARPFSRLGEWDVAKVENVMDRITGFMIHNNCENSDFSLFDRMLS 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
           +IE++FG  + ++EW+SLGGGIHFT +DYPV  FC RLK FSEK+ VQ+YLEPGEA +T 
Sbjct: 179 DIEEKFGSLLHRVEWVSLGGGIHFTGEDYPVDAFCARLKSFSEKFGVQVYLEPGEASITR 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           TTTL  TVLD   N KNL IVDSS+EAH+ D L+Y+E A + PN G ++ MVCG+SCLAG
Sbjct: 239 TTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIYREKAKMAPNNGGHSYMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGEF F+KP+ IGDR+SFED AGY + +KNWFNG+ MP IAV+ +DGT+K +REF Y 
Sbjct: 299 DIFGEFTFDKPLAIGDRLSFEDAAGYTMVKKNWFNGVKMPAIAVRELDGTVKLVREFDYA 358

Query: 361 DYYNNLS 367
           D+  +LS
Sbjct: 359 DFEGSLS 365


>gi|49476298|ref|YP_034339.1| carboxynorspermidine decarboxylase [Bartonella henselae str.
           Houston-1]
 gi|49239106|emb|CAF28409.1| Carboxynorspermidine decarboxylase [Bartonella henselae str.
           Houston-1]
          Length = 365

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 206/367 (56%), Positives = 267/367 (72%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MIKTPYYLIDK KL+ N++    +R+ +G K+LLALKCFA W +FD +++YMDGTTSSSL
Sbjct: 1   MIKTPYYLIDKSKLIRNMEIIARLREMSGAKVLLALKCFATWSVFDLMSKYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           YE+ LG EKFG ETHAY+VA+ D EID   S  D IIFN++ QL +F +       + GL
Sbjct: 61  YELRLGKEKFGKETHAYSVAWADYEIDETCSYADKIIFNSIQQLQRFANV--TKTIQRGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP +S S F LA+P+RPFSRLGE  +  I+  +  +NGLM HNNCEN  F  F  MLK
Sbjct: 119 RLNPGISASNFDLANPSRPFSRLGETNQKAIKEVLPLINGLMIHNNCENADFNLFDQMLK 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
           ++E+ F      ++WISLGGGIHFT ++YP++ F +RLK FS+ Y V I+LEPGEA +T 
Sbjct: 179 HMEERFAELFAAVDWISLGGGIHFTAENYPLETFAERLKHFSKTYDVTIFLEPGEAAITK 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           +TTL  +VLD   N KNL IVDSS+EAH+ D L+Y+E+A +  N GPY  MVCG+SCLAG
Sbjct: 239 STTLEVSVLDTLYNEKNLAIVDSSIEAHMLDLLIYRENAKLEQNQGPYEIMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFG F F +P+KIGDR+SF+D AGY + +KNWFNG+ MP I +K  +G +   R+FSYN
Sbjct: 299 DIFGTFRFPEPLKIGDRLSFQDTAGYTMVKKNWFNGVTMPAIVIKECNGALTIQRQFSYN 358

Query: 361 DYYNNLS 367
           DY  +LS
Sbjct: 359 DYQKSLS 365


>gi|23501241|ref|NP_697368.1| carboxynorspermidine decarboxylase [Brucella suis 1330]
 gi|161618317|ref|YP_001592204.1| carboxynorspermidine decarboxylase [Brucella canis ATCC 23365]
 gi|254703698|ref|ZP_05165526.1| carboxynorspermidine decarboxylase [Brucella suis bv. 3 str. 686]
 gi|260567050|ref|ZP_05837520.1| orn/DAP/Arg decarboxylase, family 2 [Brucella suis bv. 4 str. 40]
 gi|261754341|ref|ZP_05998050.1| carboxynorspermidine decarboxylase [Brucella suis bv. 3 str. 686]
 gi|23347124|gb|AAN29283.1| carboxynorspermidine decarboxylase [Brucella suis 1330]
 gi|161335128|gb|ABX61433.1| carboxynorspermidine decarboxylase [Brucella canis ATCC 23365]
 gi|260156568|gb|EEW91648.1| orn/DAP/Arg decarboxylase, family 2 [Brucella suis bv. 4 str. 40]
 gi|261744094|gb|EEY32020.1| carboxynorspermidine decarboxylase [Brucella suis bv. 3 str. 686]
          Length = 365

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 224/367 (61%), Positives = 277/367 (75%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MI+TPYYLIDK KL  N++   Y+R+ +G + LLALKCFA W +FD +++YMDGTTSSSL
Sbjct: 1   MIQTPYYLIDKTKLKRNMEKIAYVREKSGARALLALKCFATWSVFDLMSEYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            EV LGHEKFGGETHAY+VAY D EID V+S+ D IIFN++ QL +F DKA  +    GL
Sbjct: 61  NEVRLGHEKFGGETHAYSVAYADHEIDEVISHADKIIFNSIGQLERFADKASGIK--RGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP VS S F LADP RPFSRLGE    K+E  +  + G M HNNCEN  F  F  ML 
Sbjct: 119 RLNPGVSSSSFDLADPARPFSRLGEWDVAKVEKVMDRITGFMIHNNCENSDFSLFDRMLS 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
           +IE++FG  + ++EW+SLGGGIHFT +DYPV  FC RLK FSEK+ VQ+YLEPGEA +T 
Sbjct: 179 DIEEKFGSLLHRVEWVSLGGGIHFTGEDYPVDAFCARLKSFSEKFGVQVYLEPGEASITR 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           TTTL  TVLD   N KNL IVDSS+EAH+ D L+Y+E A + PN G ++ MVCG+SCLAG
Sbjct: 239 TTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIYREKAKMAPNNGGHSYMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGEF F+KP+ IGDR+SFED AGY + +KNWFNG+ MP IAV+ +DGT+K +REF Y 
Sbjct: 299 DIFGEFTFDKPLAIGDRLSFEDAAGYTMVKKNWFNGVKMPAIAVRELDGTVKLVREFDYA 358

Query: 361 DYYNNLS 367
           D+  +LS
Sbjct: 359 DFEGSLS 365


>gi|254718525|ref|ZP_05180336.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella sp. 83/13]
 gi|265983495|ref|ZP_06096230.1| carboxynorspermidine decarboxylase [Brucella sp. 83/13]
 gi|306838333|ref|ZP_07471179.1| carboxynorspermidine decarboxylase [Brucella sp. NF 2653]
 gi|264662087|gb|EEZ32348.1| carboxynorspermidine decarboxylase [Brucella sp. 83/13]
 gi|306406624|gb|EFM62857.1| carboxynorspermidine decarboxylase [Brucella sp. NF 2653]
          Length = 365

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 223/367 (60%), Positives = 277/367 (75%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MI+TPYYLIDK KL  N++   Y+R+ +G K LLALKCFA W +F+ +++YMDGTTSSSL
Sbjct: 1   MIQTPYYLIDKTKLKRNMEKIAYVREKSGAKALLALKCFATWSVFNLMSEYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            EV LGHEKFGGETHAY+VAY D EID V+S+ D IIFN++ QL +F DKA  +    GL
Sbjct: 61  NEVRLGHEKFGGETHAYSVAYADHEIDEVISHADKIIFNSIGQLERFADKASGIK--RGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP VS S F LADP RPFSRLGE    K+E  +  + G M HNNCEN  F  F  ML 
Sbjct: 119 RLNPGVSSSSFDLADPARPFSRLGEWDVAKVEKVMDRITGFMIHNNCENSDFSLFDRMLS 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
           +IE++FG  + ++EW+SLGGGIHFT +DYPV  FC RLK FSEK+ VQ+YLEPGEA +T 
Sbjct: 179 DIEEKFGSLLHRVEWVSLGGGIHFTGEDYPVDAFCARLKSFSEKFGVQVYLEPGEASITR 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           TTTL  TVLD   N KNL IVDSS+EAH+ D L+Y+E A + PN G ++ MVCG+SCLAG
Sbjct: 239 TTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIYREKAKMAPNNGGHSYMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGEF F+KP+ IGDR+SF+D AGY + +KNWFNG+ MP IAV+ +DGT+K +REF Y 
Sbjct: 299 DIFGEFTFDKPLAIGDRLSFKDAAGYTMVKKNWFNGVKMPAIAVRELDGTVKLVREFDYA 358

Query: 361 DYYNNLS 367
           D+  +LS
Sbjct: 359 DFEGSLS 365


>gi|88798871|ref|ZP_01114453.1| carboxynorspermidine decarboxylase [Reinekea sp. MED297]
 gi|88778351|gb|EAR09544.1| carboxynorspermidine decarboxylase [Reinekea sp. MED297]
          Length = 388

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 130/376 (34%), Positives = 211/376 (56%), Gaps = 11/376 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P +++D+  +  NL     + + +G ++L ALK F+ W       QY+ GT SS L+
Sbjct: 14  VPSPCFVVDEVAIERNLKILHDVAEQSGARILGALKAFSMWHFGPLTGQYLSGTCSSGLH 73

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD-----KAQKLHK 116
           E  L  + + GE H ++ A+   +++ +L+  D ++FN+ SQ  +F+       A++ H 
Sbjct: 74  EARLAKDYYPGEVHVFSAAFSQPDLEEILTLADHVVFNSCSQWQRFQPQIQAALAKRPHM 133

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
             GLRINP  S     + DP  P SRLG    +  ES ++ ++GL FH  CE   F    
Sbjct: 134 DFGLRINPEHSEGDVPIYDPCAPGSRLGIPLSELDESALEGISGLHFHTLCEQG-FEPLD 192

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
             L   E++FGH  ++++WI+ GGG H T  DY  +   +R++ F EKY+V++YLEPGEA
Sbjct: 193 RTLTVFEEKFGHLFSKMKWINFGGGHHITAPDYDREALIRRIRAFKEKYNVEVYLEPGEA 252

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMV 292
           +   +  L   VLD++ N     I+D+S   H+PD L     A I     P    +T  +
Sbjct: 253 MAIGSGVLVAEVLDLTFNTLPQAILDTSATCHMPDTLEMPYRADISNAGEPGEKAHTYRL 312

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV-DGTI 351
            G +CLAGD+ G++ F++P++IG R+ FED+A Y + + + FNG  +P+IAV N      
Sbjct: 313 GGLTCLAGDVIGDYSFDQPLEIGQRLIFEDMAHYTMVKTSTFNGTRLPSIAVWNSTTDAF 372

Query: 352 KAIREFSYNDYYNNLS 367
             +R+F Y+D+ + LS
Sbjct: 373 SVVRDFDYDDFRSRLS 388


>gi|256112854|ref|ZP_05453775.1| carboxynorspermidine decarboxylase [Brucella melitensis bv. 3 str.
           Ether]
 gi|265994300|ref|ZP_06106857.1| carboxynorspermidine decarboxylase [Brucella melitensis bv. 3 str.
           Ether]
 gi|262765413|gb|EEZ11202.1| carboxynorspermidine decarboxylase [Brucella melitensis bv. 3 str.
           Ether]
          Length = 365

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 225/367 (61%), Positives = 278/367 (75%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MI+TPYYLIDK KL  N++   Y+R+ +G K LLALKCFA W +FD +++YMDGTTSSSL
Sbjct: 1   MIQTPYYLIDKTKLKRNMEKIAYVREKSGAKALLALKCFATWSVFDLMSEYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            EV LGHEKFGGETHAY+VAY D EID V+S+ D IIFN++ QL +F DKA  +    GL
Sbjct: 61  NEVRLGHEKFGGETHAYSVAYADYEIDEVISHADKIIFNSIGQLERFADKASGIK--RGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP VS S F LADP RPFSRLGE    K+E+ +  + G M HNNCEN  F  F  ML 
Sbjct: 119 RLNPGVSSSSFDLADPARPFSRLGEWDVAKVENVMDRITGFMIHNNCENSDFSLFDRMLS 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
           +IE++FG  + ++EW+SLGGGIHFT +DYPV  FC RLK FSEK+ VQ+YLEPGEA +T 
Sbjct: 179 DIEEKFGSLLHRVEWVSLGGGIHFTGEDYPVDAFCARLKSFSEKFGVQVYLEPGEASITR 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           TTTL  TVLD   N KNL IVDSS+EAH+ D L+Y+E A + PN G ++ MVCG+SCLAG
Sbjct: 239 TTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIYREKAKMAPNNGGHSYMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGEF F+KP+ IGDR+SFED AGY + +KNWFNG+ MP IAV+ +DGT+K +REF Y 
Sbjct: 299 DIFGEFTFDKPLAIGDRLSFEDAAGYTMVKKNWFNGVKMPAIAVRELDGTVKLVREFDYA 358

Query: 361 DYYNNLS 367
           D+  +LS
Sbjct: 359 DFEGSLS 365


>gi|319946804|ref|ZP_08021038.1| carboxynorspermidine decarboxylase [Streptococcus australis ATCC
           700641]
 gi|319746852|gb|EFV99111.1| carboxynorspermidine decarboxylase [Streptococcus australis ATCC
           700641]
          Length = 375

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 133/371 (35%), Positives = 205/371 (55%), Gaps = 6/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+ID  KL  N      +++  G K+LLA K ++ +  +  ++QY+ GTT+S  Y
Sbjct: 6   VPTPSYIIDLGKLEENCRILQEVQEKTGCKVLLAQKAYSLYKTYPLISQYLSGTTASGFY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+F GE H +  A+K+ +++ +L   D I+FN+  QL K+  + ++    +GLR
Sbjct: 66  EAKLAREEFPGEVHVFAPAFKESDMEELLKISDHIVFNSERQLRKYGQRCREAGISVGLR 125

Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +NP  S      L DP  P SR G          +  V+GL FH  CE  +       LK
Sbjct: 126 LNPKCSTQGDHALYDPCAPGSRFGVTSDKIPSDLLDLVDGLHFHTLCEQGADD-LETTLK 184

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++FG ++ Q++W+++GGG H T  DY V      +K   E Y++ IY+EPGEAI  N
Sbjct: 185 AVEEQFGAYLHQVKWLNMGGGHHITRDDYDVDLLISEIKRIRETYNLDIYIEPGEAIALN 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296
              L T VLDI EN    +++D+S   H+PD L       +         PYT  +   +
Sbjct: 245 AGYLATEVLDIVENGIETLVLDASASCHMPDVLEMPYRPPLRDGFEAQEKPYTYRLSSNT 304

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CL GDI G++ FEKP++IGDR+ FED+A Y+  + N FNGI +P++ + + +G    ++ 
Sbjct: 305 CLTGDIIGDYSFEKPIEIGDRLYFEDMAIYSFVKNNTFNGIGLPSLYLMDKEGECSLVKA 364

Query: 357 FSYNDYYNNLS 367
           F Y D+   LS
Sbjct: 365 FGYQDFKERLS 375


>gi|332202776|gb|EGJ16845.1| carboxynorspermidine decarboxylase [Streptococcus pneumoniae
           GA41317]
          Length = 375

 Score =  277 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 129/371 (34%), Positives = 205/371 (55%), Gaps = 6/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+ID  KL  N     Y+++ AG K+LLA K ++ +  +  ++QY+ GTT+S LY
Sbjct: 6   VPTPAYVIDLAKLEANCCILQYVQEEAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+F GE H +  A+KD +++ +L   D I+FN+  QL K   + ++    +GLR
Sbjct: 66  EAKLAREEFPGEVHVFAPAFKDADLEELLEITDHIVFNSERQLRKHGPRCREAGVSVGLR 125

Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +NP  S      L DP  P SR G          +  V+G  FH  CE  +       LK
Sbjct: 126 LNPQCSTQGDHALYDPCAPGSRFGVTIDKIPSDLLDLVDGFHFHTLCEQGADD-LQTTLK 184

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++FG ++ +++W+++GGG H T + Y V      +K   + Y+++IY+EPGEAI  N
Sbjct: 185 AVEEQFGPYLHEVKWLNMGGGHHITREGYDVDLLISEIKRIRKTYNLEIYIEPGEAIALN 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296
              L T VLDI EN   ++++D+S   H+PD L       +          +T  +   +
Sbjct: 245 AGYLATEVLDIVENGMEILVLDASATCHMPDVLEMPYRPPLRNGFEAQEKAHTYRLSSNT 304

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CL GD+ G++ FE PV+IGDR+ F+D+A Y+  + N FNGI +P++ + +  G    ++ 
Sbjct: 305 CLTGDVIGDYSFENPVQIGDRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDEQGDCSLLKA 364

Query: 357 FSYNDYYNNLS 367
           F Y D+   LS
Sbjct: 365 FGYQDFKGRLS 375


>gi|70730900|ref|YP_260641.1| carboxynorspermidine decarboxylase [Pseudomonas fluorescens Pf-5]
 gi|68345199|gb|AAY92805.1| carboxynorspermidine decarboxylase [Pseudomonas fluorescens Pf-5]
          Length = 365

 Score =  277 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 216/367 (58%), Positives = 279/367 (76%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MIKTPYYLIDKQKLL+N+    Y+R+ +G K LLALKCFA W +FD + QYMDGTTSSSL
Sbjct: 1   MIKTPYYLIDKQKLLSNMQKIAYVREQSGAKALLALKCFATWSVFDLMQQYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           YE+ LG +KF GETHAY+VA+ D EI+ +L+NCD IIFN++SQL +F D +    K  GL
Sbjct: 61  YELKLGRQKFEGETHAYSVAWADDEIEEMLANCDKIIFNSISQLQRFADAS--AGKVRGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP VS S ++LADP RPFSRLGE    KIE  I+ ++G MFHNNCEN  F  F  ML 
Sbjct: 119 RVNPQVSSSDYLLADPARPFSRLGEWDPAKIEQVIEQISGFMFHNNCENGDFGLFDQMLT 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            IE+ FGH + ++EW+SLGGGIHFT +DY +  FC RLK FS+KY VQ+YLEPGEA +T 
Sbjct: 179 TIEERFGHLLHKVEWVSLGGGIHFTGEDYALDAFCARLKAFSQKYGVQVYLEPGEAAITQ 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           + +L  TVLD   N K+L +VDSS+EAH+ D L+Y+ +A + P+ G +T MVCG+SCLAG
Sbjct: 239 SASLEVTVLDTLYNGKHLAVVDSSIEAHMLDLLIYRLNAKLSPSAGEHTYMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGE+ F++P+ IGDR+SF D AGY + +KNWFNG+ MP+I VK +DG+I+ +REF + 
Sbjct: 299 DIFGEYQFDRPLAIGDRLSFIDAAGYTMVKKNWFNGLKMPSIVVKQLDGSIEVVREFGFE 358

Query: 361 DYYNNLS 367
           DY ++LS
Sbjct: 359 DYLSSLS 365


>gi|325265253|ref|ZP_08131978.1| carboxynorspermidine decarboxylase [Clostridium sp. D5]
 gi|324029432|gb|EGB90722.1| carboxynorspermidine decarboxylase [Clostridium sp. D5]
          Length = 375

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 130/371 (35%), Positives = 201/371 (54%), Gaps = 6/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TP YL+D+  L NNL     +++  G ++LLA K F+ + ++  +  Y+ G T+S LY
Sbjct: 6   LRTPVYLVDEAILENNLKILAKVQEETGSRILLAQKAFSMYHVYPMIRHYLAGATASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+ GGE H ++ AY   E+  +   CD I FN+++QL + +   +      GLR
Sbjct: 66  EARLAAEEMGGENHVFSPAYTAKEMQELCGICDHISFNSIAQLERHRALWESNGVSAGLR 125

Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           INP  S      + DP  P SRLG + +       K V GL  H  CE           +
Sbjct: 126 INPEHSTQEGHPIYDPCAPGSRLGIRRELFPGKLPKGVEGLHIHTLCEQD-AAPLVETFE 184

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++FG ++ Q++W++LGGG H T   Y +      L    + Y VQ+YLEPGEAI  N
Sbjct: 185 AVEEKFGEYLHQLKWLNLGGGHHITRPGYDLDTLKDLLCRIRDTYQVQVYLEPGEAIALN 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGRS 296
              L T V+DI EN + ++I+D+S   H+PD L       +     P   P T  +  R+
Sbjct: 245 AGYLITEVMDIVENERPVLILDASAACHMPDVLEMPYRPPLKDSGMPGEKPVTCTLACRT 304

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CLAGD+ G++ F+    IG+R+ FED+A Y + + + FNG+ +P IA+   DG  + +++
Sbjct: 305 CLAGDVIGDYSFDMQPGIGERLVFEDMAIYTMVKNHTFNGMPLPDIALLRKDGRCEVVKQ 364

Query: 357 FSYNDYYNNLS 367
           F Y D+   LS
Sbjct: 365 FGYKDFKERLS 375


>gi|222106820|ref|YP_002547611.1| carboxynorspermidine decarboxylase [Agrobacterium vitis S4]
 gi|221737999|gb|ACM38895.1| carboxynorspermidine decarboxylase [Agrobacterium vitis S4]
          Length = 365

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 213/367 (58%), Positives = 277/367 (75%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           M++TP+YLIDK KLL+N++    +R+ +G K LLALKCFA W +FD +  YMDGTTSSSL
Sbjct: 1   MLQTPFYLIDKSKLLSNMEKIALLRETSGAKALLALKCFATWSVFDLMRDYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           YEV LG EKFGGETHAY+VAY D EID V+S+ D IIFN+V QL ++ DKA  +    GL
Sbjct: 61  YEVRLGREKFGGETHAYSVAYGDNEIDEVISHADKIIFNSVGQLERYGDKASGIT--RGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP VS S F LADP RPFSRLGE    K+E  +  ++G M HNNCENK F  F +ML 
Sbjct: 119 RLNPQVSSSSFDLADPARPFSRLGEWDAAKVEKVMDRISGFMIHNNCENKDFALFDSMLS 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
           +IE +FG  + + EW+SLGGGIHFT +DYP+  F +RLK FS +Y VQ+YLEPGEA +T 
Sbjct: 179 DIEAKFGSLLHRAEWVSLGGGIHFTGEDYPLAQFAERLKRFSGEYGVQVYLEPGEASITK 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           +TTL  +VLD   N KNL IVDSS+EAH+ D L+Y+E+A + PN G ++ M+CG+SCLAG
Sbjct: 239 STTLEVSVLDTLYNGKNLAIVDSSIEAHMLDLLIYRETAKLEPNAGDHSYMICGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           D+FGEF F + +K+GDRIS +D AGY + +KNWFNG+ MP+IA++ +DG+I+ +REFSY 
Sbjct: 299 DVFGEFRFPEALKVGDRISIQDAAGYTMVKKNWFNGVKMPSIAIRELDGSIRTVREFSYA 358

Query: 361 DYYNNLS 367
           D+  +LS
Sbjct: 359 DFEQSLS 365


>gi|283798446|ref|ZP_06347599.1| carboxynorspermidine decarboxylase [Clostridium sp. M62/1]
 gi|291073852|gb|EFE11216.1| carboxynorspermidine decarboxylase [Clostridium sp. M62/1]
          Length = 395

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 132/370 (35%), Positives = 220/370 (59%), Gaps = 6/370 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TPY+LID+++L  NL+    ++++ G ++LLA K F+ +  +  + +Y+ G+T+S LY
Sbjct: 26  VSTPYFLIDEERLRKNLEILKKVQEDTGCRILLAQKAFSTFFAYPLIREYLAGSTASGLY 85

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LG E+FGGETH ++ AY++ E + +LS  D ++FN+ SQL K+ ++A+   K +GLR
Sbjct: 86  EARLGREEFGGETHVFSPAYREDEFEELLSYADHLVFNSPSQLRKYGERARAAGKSVGLR 145

Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +NP  S      + DP  P SRLG   ++  ES +  ++GL FH  CE  S         
Sbjct: 146 VNPECSTQEGHAIYDPCAPGSRLGTTAENFDESLLPLLDGLHFHTLCEQNS-DALEQTAA 204

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
             E++FG ++  ++W++LGGG H T  DY V+   + +  F + Y + +YLEPGEA+V N
Sbjct: 205 AFEEKFGKYLGNMKWLNLGGGHHITRDDYDVERLERIISHFRDTYGLTVYLEPGEAVVLN 264

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGRS 296
              L +TVL+  +N  ++ I+D+S   H+PD L       +     P    +T  + G +
Sbjct: 265 AGFLVSTVLETVKNGIDIAILDTSAACHMPDVLEMPYRPPVSDSGLPGEKAFTFRLAGPT 324

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CLAGD+ G++ F+ P++ G ++ FED+A Y + + N FNG+ +P+I  + +D     I++
Sbjct: 325 CLAGDVIGDYSFDTPLEAGSQVVFEDMALYTMVKTNTFNGMALPSIVWRGLDKRETLIKK 384

Query: 357 FSYNDYYNNL 366
           F Y D+   L
Sbjct: 385 FGYEDFKGRL 394


>gi|126654279|ref|ZP_01726062.1| hypothetical protein BB14905_10510 [Bacillus sp. B14905]
 gi|126589268|gb|EAZ83428.1| hypothetical protein BB14905_10510 [Bacillus sp. B14905]
          Length = 379

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 142/372 (38%), Positives = 219/372 (58%), Gaps = 7/372 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P Y++D++ L  NL+    I+   G ++LLALK F+    F  + +Y+ G T+SSL+
Sbjct: 9   VPSPSYVVDERLLTKNLELLKSIQDRTGCRILLALKGFSMHSTFPLVGEYLAGITASSLH 68

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKIG 119
           E  LG+EK G E H Y  AY + E+D +L   D ++FN+ +Q  +FKDK +      + G
Sbjct: 69  EARLGYEKMGKEVHVYAPAYIEHEMDELLGYVDHVVFNSFNQWAQFKDKVKSTGKTIECG 128

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +R+NP  S  +  L DP    SRLG    +  +S++  ++GL FH  CE  S      ++
Sbjct: 129 IRLNPEYSEIETALYDPCYTNSRLGTTLANFDKSQLDGIDGLHFHAMCEQNS-DTLERII 187

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
           + +E++FG  + Q++W++ GGG H T +DY V+     +    EKY++ +YLEPGEA+  
Sbjct: 188 EVVEEKFGDVLHQMKWLNFGGGHHITREDYDVEKLVNIINYVQEKYNLLVYLEPGEAVAL 247

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGR 295
           NT  L  TVLDI EN  +L I+D+S   H+PD L       I      N   +T  + G 
Sbjct: 248 NTGYLVATVLDIQENGMDLAILDTSATCHMPDVLEMPYRPMIIGSGQANEFAHTYRLGGL 307

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           +CLAGD+ G++ FE+P+K GDR+ F D+A Y++ + + FNG+N+P+I   N +  IK IR
Sbjct: 308 TCLAGDVIGDYSFEQPLKPGDRLVFTDMAHYSMVKNHMFNGVNLPSIVSYNDEEGIKIIR 367

Query: 356 EFSYNDYYNNLS 367
           EF + DY   LS
Sbjct: 368 EFKFEDYSGRLS 379


>gi|306844972|ref|ZP_07477553.1| carboxynorspermidine decarboxylase [Brucella sp. BO1]
 gi|306274604|gb|EFM56393.1| carboxynorspermidine decarboxylase [Brucella sp. BO1]
          Length = 365

 Score =  275 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 224/367 (61%), Positives = 276/367 (75%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MI+TPYYLIDK KL  N++    +R+ +G K LLALKCFA W +FD +++YMDGTTSSSL
Sbjct: 1   MIQTPYYLIDKTKLKRNMEKIACVREKSGAKALLALKCFATWSVFDLMSEYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            EV LGHEKFGGETHAY+VAY D EID V+S+ D IIFN++ QL +F DKA  +    GL
Sbjct: 61  NEVRLGHEKFGGETHAYSVAYADHEIDEVISHADKIIFNSIGQLERFADKASGIK--RGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP VS S F LADP RPFSRLGE    K+E  +  + G M HNNCEN  F  F  ML 
Sbjct: 119 RLNPGVSSSSFDLADPARPFSRLGEWDVAKVEKVMDRITGFMIHNNCENSDFSLFDRMLS 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
           +IE++FG  + ++EW+SLGGGIHFT +DYPV  FC RLK FSEK+ VQ+YLEPGEA +T 
Sbjct: 179 DIEEKFGSLLHRVEWVSLGGGIHFTGEDYPVDAFCARLKSFSEKFGVQVYLEPGEASITR 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           TTTL  TVLD   N KNL IVDSS+EAH+ D L+Y+E A + PN G ++ MVCG+SCLAG
Sbjct: 239 TTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIYREKAKMAPNNGGHSYMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGEF F+KP+ IGDR+SFED AGY + +KNWFNG+ MP IAV+ +DGT+K +REF Y 
Sbjct: 299 DIFGEFTFDKPLAIGDRLSFEDAAGYTMVKKNWFNGVKMPAIAVRELDGTVKLVREFDYA 358

Query: 361 DYYNNLS 367
           D+  +LS
Sbjct: 359 DFEGSLS 365


>gi|104781480|ref|YP_607978.1| carboxynorspermidine decarboxylase NspC [Pseudomonas entomophila
           L48]
 gi|95110467|emb|CAK15175.1| carboxynorspermidine decarboxylase NspC [Pseudomonas entomophila
           L48]
          Length = 365

 Score =  275 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 218/367 (59%), Positives = 284/367 (77%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MIKTPYYLIDKQKLL N++   Y+R+ +G K LLALKCFA W +FD + QYMDGTTSSSL
Sbjct: 1   MIKTPYYLIDKQKLLGNMEKIAYVRQQSGAKALLALKCFATWSVFDLMQQYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           YE+ LG +KF GETHAY+VA+ D E++ +L NCD IIFN++ QL +F +  Q   K  GL
Sbjct: 61  YELKLGRQKFAGETHAYSVAWADDEVEEMLENCDKIIFNSIGQLERFAE--QSEGKVRGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP VS S ++LADP RPFSRLGE   +KIE  I+ ++G MFHNNCEN  F  F  ML 
Sbjct: 119 RVNPQVSSSDYLLADPARPFSRLGEWDPEKIEKVIEKISGFMFHNNCENGDFSLFDKMLS 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
           +IE+ FGH + ++EW+SLGGGIHFT +DY V  FC RLK F+EKY+VQ+YLEPGEA +TN
Sbjct: 179 HIEERFGHLLHKVEWVSLGGGIHFTGEDYAVDAFCARLKAFAEKYAVQVYLEPGEAAITN 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           + +L  TVLD   N K+L +VDSS+EAH+ D L+Y+ +A + PN G +T MVCG+SCLAG
Sbjct: 239 SASLEVTVLDTLYNGKHLAVVDSSIEAHLLDLLIYRLNAKMAPNDGAHTYMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGE+ F+KP++IGDR+SF D AGY + +KNWFNG+ MP+IAVK +DG+++ +REF ++
Sbjct: 299 DIFGEYQFDKPLQIGDRLSFVDTAGYTMVKKNWFNGLKMPSIAVKQLDGSVEVVREFGFD 358

Query: 361 DYYNNLS 367
           DY ++LS
Sbjct: 359 DYVSSLS 365


>gi|302337429|ref|YP_003802635.1| carboxynorspermidine decarboxylase [Spirochaeta smaragdinae DSM
           11293]
 gi|301634614|gb|ADK80041.1| carboxynorspermidine decarboxylase [Spirochaeta smaragdinae DSM
           11293]
          Length = 387

 Score =  275 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 126/373 (33%), Positives = 201/373 (53%), Gaps = 8/373 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P +++DK  +  NL     I+K +G ++LLA K F+ + ++  ++Q + G  +S LY
Sbjct: 16  VPSPCFVVDKAAIRRNLAILDSIQKTSGARILLAQKGFSMFSLYPMISQTLKGVCASGLY 75

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK--DKAQKLHKKIG 119
           E  LG E FG E H Y+ A+   + + +L   D ++FN+ SQ  +F+            G
Sbjct: 76  EAKLGREAFGKEVHTYSPAFVPEQFETILELSDHVVFNSFSQWKRFRSSCLPFAGRVSCG 135

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +R+NP VS +   L DP+ P SRLG    +     +  + GL FH  CE  +      +L
Sbjct: 136 IRVNPEVSTAAVRLYDPSAPGSRLGVTAAEFRPELLDGIEGLHFHALCEQNADD-LERVL 194

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
           K     FG +  ++ WI+ GGG H T  DY     C+ ++E S++Y V +YLEPGEA+  
Sbjct: 195 KGFHHSFGTWAGRMRWINFGGGHHITRNDYDRALLCRLIEECSDRYGVDVYLEPGEAVAL 254

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGR 295
           N+  L  TVLDI  N   + ++D+S   H+PD L       I     P    YT  + G 
Sbjct: 255 NSGVLVATVLDIVRNDGRIALLDTSAATHMPDVLEMPYRPEIAGAGKPGEKRYTYRLGGS 314

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV-DGTIKAI 354
           SCLAGD+ G + F+ P++ G R+ F D+A Y++ +   FNG+ +P IA  +   GT++ +
Sbjct: 315 SCLAGDVIGTYSFDTPLEPGSRLVFGDMAHYSMVKTTTFNGVPLPAIATYDSATGTLEVV 374

Query: 355 REFSYNDYYNNLS 367
           ++F + D+   LS
Sbjct: 375 KQFGFEDFRERLS 387


>gi|49474810|ref|YP_032852.1| carboxynorspermidine decarboxylase [Bartonella quintana str.
           Toulouse]
 gi|49240314|emb|CAF26796.1| Carboxynorspermidine decarboxylase [Bartonella quintana str.
           Toulouse]
          Length = 365

 Score =  275 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 205/367 (55%), Positives = 267/367 (72%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MI+TPYYLIDK KL+ N++    +R+ +G K+LLALKCFA W +FD +++YMDGTTSSSL
Sbjct: 1   MIRTPYYLIDKSKLIRNMEIITRVREMSGAKILLALKCFATWSLFDLMSEYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           YE+ LG EKFG ETHAY+VA+ D EID V +  D IIFN++ QL +F         + GL
Sbjct: 61  YELRLGREKFGKETHAYSVAWADDEIDEVCNYADKIIFNSIQQLQRFSK--TPKTIQRGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP +S S F LA+P+RPFSRLGE  +  I+  +  +NGLM HNNCEN  F  F+ ML 
Sbjct: 119 RLNPGISASNFDLANPSRPFSRLGETNQSAIKKVLPLINGLMIHNNCENADFNLFNKMLS 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
           ++E++F      ++WISLGGGIHFT ++YP++ F +RLK FS+ Y V I+LEPGEA +T 
Sbjct: 179 HMEEQFAELFAAVDWISLGGGIHFTAENYPLETFAERLKHFSKTYGVTIFLEPGEAAITK 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           +TTL  +VLD  EN K L IVDSS EAH+ D L+Y+E+A + PN GP+  MVCG+SCLAG
Sbjct: 239 STTLEVSVLDTLENEKKLAIVDSSTEAHMLDLLIYRENAKLEPNQGPHEIMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFG F F +P+KIGDR+SF+D AGY + +KNWFNG+ MP I VK   G +   R+FSYN
Sbjct: 299 DIFGTFRFPEPLKIGDRLSFQDAAGYTMVKKNWFNGLQMPAIVVKECSGALIIQRQFSYN 358

Query: 361 DYYNNLS 367
           DY  +LS
Sbjct: 359 DYQKSLS 365


>gi|239831198|ref|ZP_04679527.1| carboxynorspermidine decarboxylase [Ochrobactrum intermedium LMG
           3301]
 gi|239823465|gb|EEQ95033.1| carboxynorspermidine decarboxylase [Ochrobactrum intermedium LMG
           3301]
          Length = 365

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 222/367 (60%), Positives = 277/367 (75%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MI+TPYYLIDK KL  N++   Y+R+ +G K LLALKCFA W +FD +++YMDGTTSSSL
Sbjct: 1   MIQTPYYLIDKTKLKRNMEKVAYVREKSGAKALLALKCFATWSVFDLMSEYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            EV LGHE+FGGETHAY+VAY D EID V+S+ D IIFN++ QL +F DKA  +    GL
Sbjct: 61  NEVRLGHERFGGETHAYSVAYADNEIDEVISHADKIIFNSIGQLERFADKASGIK--RGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP +S S F LADP RPFSRLGE    K+E  +  V G M HNNCEN  F  F  ML 
Sbjct: 119 RLNPGISSSSFDLADPARPFSRLGEWDVAKVEKVMDRVTGFMIHNNCENSDFGLFDRMLT 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
           +IE++FG  + ++EW+SLGGGIHFT  DYPV +FC RLK FSEK+ +Q+YLEPGEA +T 
Sbjct: 179 DIEQKFGSLLNRVEWVSLGGGIHFTGDDYPVDEFCARLKAFSEKFGIQVYLEPGEASITK 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           TTTL  TVLD   N KNL IVDSS+EAH+ D L+Y+E A + PN G ++ MVCG+SCLAG
Sbjct: 239 TTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIYREKAKMAPNNGEHSYMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGEF F+KP+ IGDR+SFED AGY + +KNWFNG+ MP IAV+ +DGT++ +REF Y 
Sbjct: 299 DIFGEFTFDKPLAIGDRLSFEDAAGYTMVKKNWFNGVKMPAIAVRELDGTVRVVREFDYA 358

Query: 361 DYYNNLS 367
           D+  +LS
Sbjct: 359 DFEGSLS 365


>gi|308273729|emb|CBX30331.1| hypothetical protein N47_D31400 [uncultured Desulfobacterium sp.]
          Length = 379

 Score =  275 bits (703), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 147/372 (39%), Positives = 218/372 (58%), Gaps = 7/372 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y+++++ L  NL     ++K  G ++++ALK FA + +F  + QY+ G ++SS  
Sbjct: 9   ISTPCYILEEEALERNLKILDSVQKQTGARIIMALKGFAMFSVFPLIRQYLSGISASSAD 68

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHKKIG 119
           E  LG+E+FG + H  + AY D E + +L+  D I+FN+ SQ   F     A K     G
Sbjct: 69  EARLGYEEFGSKVHVCSPAYSDSEFNEILNYADYIVFNSFSQWRHFKADVTASKKKILCG 128

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +RINP  S  +  + DP   FSRLG    +  E E+  ++G+ FHN CE  S       L
Sbjct: 129 IRINPEYSEVRTTIYDPCGQFSRLGTTRDNFKEDELDGISGIHFHNLCELNSDSLLRT-L 187

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
           K +E++FG F  +++WI+ GGG H T KDY VK  C  + +F +++ + +YLEPGEAI  
Sbjct: 188 KVVEEKFGLFFNRLKWINFGGGHHITRKDYDVKLLCDLINDFKKRHPLDVYLEPGEAIAL 247

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGR 295
           N   L T+V+DI  N  N+ I+D+S   H+PD L       I     P    +T  + G 
Sbjct: 248 NAGVLETSVVDIIYNKMNIAILDTSAATHMPDVLEMPYRPNITGAGLPGEYRHTYRLGGV 307

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           +CLAGDI G++ F +P+K G RI FED+A Y + + N FNGI +P+IA+K+  G I+ I+
Sbjct: 308 TCLAGDIIGDYSFPEPLKTGSRIVFEDMAHYTMVKNNTFNGIRLPSIAIKDKSGDIRIIK 367

Query: 356 EFSYNDYYNNLS 367
           +F Y DY N LS
Sbjct: 368 KFGYEDYKNRLS 379


>gi|260889302|ref|ZP_05900565.1| carboxynorspermidine decarboxylase [Leptotrichia hofstadii F0254]
 gi|260860713|gb|EEX75213.1| carboxynorspermidine decarboxylase [Leptotrichia hofstadii F0254]
          Length = 395

 Score =  275 bits (703), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 134/383 (34%), Positives = 225/383 (58%), Gaps = 18/383 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP +++D++ L  NL+T   +    G K+LLA K F+ +  +  +++Y++GTT+SSL+
Sbjct: 14  LPTPAFIVDERLLKRNLETLKSVIDRTGCKILLAQKGFSMFYFYPLISEYLNGTTASSLF 73

Query: 62  EVMLGHEKF-------GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ-- 112
           E  LG+E+          ETH +N +Y++ E D ++   + I+FN+ +Q  KFK + +  
Sbjct: 74  EARLGYEEMELKNPNKKLETHIFNPSYREDEFDEIMEITNHIVFNSFNQWKKFKSRVREF 133

Query: 113 ----KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE 168
                     GLR+NP  S  +  + +P   FSR G   ++  E+E++ ++G  FH  CE
Sbjct: 134 EEKSDKKISCGLRLNPEFSEVETEIYNPAGRFSRFGVTLENFKENELEGLDGFHFHALCE 193

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
             S      +L+  E++FG ++  ++W++ GGG H T +DY ++   + +    EKY V+
Sbjct: 194 QNS-DALENVLRIFEEKFGKYLHNMKWLNFGGGHHITREDYDIEKLVKCINYIKEKYDVE 252

Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPN 284
           +YLEPGEA+  NT  L + VLDI++N  +++++D+S   H+PD +       I      N
Sbjct: 253 VYLEPGEAVALNTGFLVSEVLDITKNEMDILLMDTSASCHMPDVIEMPYRPFIFGSGMSN 312

Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344
              YT  + G +CLAGD+ G++ F+ PVK+GD++ F D+A Y++ + N FNGIN+P IAV
Sbjct: 313 EKKYTYRLGGPTCLAGDVIGDYSFDDPVKVGDKLIFTDMAHYSMVKTNTFNGINLPVIAV 372

Query: 345 KNVDGTIKAIREFSYNDYYNNLS 367
               G ++ IR+F Y D+ N LS
Sbjct: 373 YTEKGGVEVIRKFEYEDFRNRLS 395


>gi|150376298|ref|YP_001312894.1| carboxynorspermidine decarboxylase [Sinorhizobium medicae WSM419]
 gi|150030845|gb|ABR62961.1| carboxynorspermidine decarboxylase [Sinorhizobium medicae WSM419]
          Length = 365

 Score =  275 bits (703), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 210/367 (57%), Positives = 273/367 (74%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MI+TPYYLIDK KL+ N++   ++R+ +G K LLALKCFA W +FD +  YMDGTTSSSL
Sbjct: 1   MIETPYYLIDKSKLIRNMEKIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           +EV LG EKFG ETHAY+VAY D EID V+ + D IIFN++SQL ++ ++A       GL
Sbjct: 61  FEVRLGREKFGKETHAYSVAYGDNEIDEVVLHADKIIFNSISQLERYAERA--AGIARGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP VS S F LADP RPFSRLGE    K+E  +  +NG M HNNCENK+F  F  +L 
Sbjct: 119 RLNPQVSSSSFDLADPARPFSRLGEWDVAKVERVMDRINGFMIHNNCENKNFDLFDCLLA 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            IE+ FG  + + +W+SLGGGIHFT  DYPV  F  RL+ FS++Y VQ+YLEPGEA +T 
Sbjct: 179 QIEERFGSLLERADWVSLGGGIHFTGDDYPVDTFSARLRAFSDRYDVQVYLEPGEASITK 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           +TTL  TVLD   N KNL IVDSS+EAH+ D L+Y+E+A + PN GP++ M+CG+SCLAG
Sbjct: 239 STTLEVTVLDTLYNGKNLAIVDSSIEAHMLDLLIYRETAKVSPNEGPHSYMICGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           D+FGEF F   +K+GDRISF+D AGY + +KNWFNG+ MP IA+K +DG+++ +REF+Y 
Sbjct: 299 DVFGEFRFADALKVGDRISFQDAAGYTMVKKNWFNGVKMPAIAIKELDGSVRTVREFTYA 358

Query: 361 DYYNNLS 367
           D+  +LS
Sbjct: 359 DFEKSLS 365


>gi|16265298|ref|NP_438090.1| putative carboxynorspermidine decarboxylase protein [Sinorhizobium
           meliloti 1021]
 gi|307316795|ref|ZP_07596237.1| carboxynorspermidine decarboxylase [Sinorhizobium meliloti AK83]
 gi|15141438|emb|CAC49950.1| putative carboxynorspermidine decarboxylase protein [Sinorhizobium
           meliloti 1021]
 gi|306897417|gb|EFN28161.1| carboxynorspermidine decarboxylase [Sinorhizobium meliloti AK83]
          Length = 365

 Score =  275 bits (703), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 215/367 (58%), Positives = 273/367 (74%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MI+TPYYLIDK KL  N++   ++R+ +G K LLALKCFA W +FD +  YMDGTTSSSL
Sbjct: 1   MIETPYYLIDKAKLTRNMERIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           +EV LG E+FG ETHAY+VAY D EID V+S+ D IIFN++SQL +F DKA       GL
Sbjct: 61  FEVRLGRERFGKETHAYSVAYGDNEIDEVVSHADKIIFNSISQLERFADKA--AGIARGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP VS S F LADP RPFSRLGE    K+E  +  +NG M HNNCENK F  F  ML 
Sbjct: 119 RLNPQVSSSSFDLADPARPFSRLGEWDVPKVERVMDRINGFMIHNNCENKDFGLFDRMLG 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            IE+ FG  I +++W+SLGGGIHFT  DYPV  F  RL+ FS++Y VQIYLEPGEA +T 
Sbjct: 179 EIEERFGALIARVDWVSLGGGIHFTGDDYPVDAFSARLRAFSDRYGVQIYLEPGEASITK 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           +TTL  TVLD   N KNL IVDSS+EAH+ D L+Y+E+A + PN G ++ M+CG+SCLAG
Sbjct: 239 STTLEVTVLDTLYNGKNLAIVDSSIEAHMLDLLIYRETAKVLPNEGSHSYMICGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           D+FGEF F + +K+GDRISF+D AGY + +KNWFNG+ MP IA++ +DG+++ +REF+Y 
Sbjct: 299 DVFGEFRFAEELKVGDRISFQDAAGYTMVKKNWFNGVKMPAIAIRELDGSVRTVREFTYA 358

Query: 361 DYYNNLS 367
           DY  +LS
Sbjct: 359 DYEQSLS 365


>gi|299537795|ref|ZP_07051084.1| carboxynorspermidine decarboxylase [Lysinibacillus fusiformis ZC1]
 gi|298726774|gb|EFI67360.1| carboxynorspermidine decarboxylase [Lysinibacillus fusiformis ZC1]
          Length = 379

 Score =  275 bits (703), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 144/372 (38%), Positives = 218/372 (58%), Gaps = 7/372 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P Y++D++ L  NL+    I+   G ++LLALK F+    F  + +Y+ G TSSSL+
Sbjct: 9   VPSPSYVVDERLLTKNLELLKSIQDRTGCRILLALKGFSMHSTFPLVGEYLAGITSSSLH 68

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIG 119
           E  LG+EK G E H Y  AY + E+D +L   D I+FN+ +Q  +FKDK +      + G
Sbjct: 69  EARLGYEKMGKEVHVYAPAYIEHEMDELLGYVDHIVFNSFNQWAQFKDKVKSAGKTIECG 128

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +R+NP  S  +  L DP    SRLG    +  +S++  ++GL FH  CE  S      ++
Sbjct: 129 IRVNPEYSEIETALYDPCYTNSRLGTTLANFDKSQLDGIDGLHFHAMCEQNS-DTLERII 187

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
           + +E++FG  + Q++W++ GGG H T  DY V+     +    EKY++ +YLEPGEA+  
Sbjct: 188 EVVEEKFGDVLHQMKWLNFGGGHHITRDDYDVEKLVNIINYIQEKYNLLVYLEPGEAVAL 247

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGR 295
           NT  L  TVLDI EN  +L I+D+S   H+PD L       I      N   +T  + G 
Sbjct: 248 NTGYLVATVLDIQENGMDLAILDTSATCHMPDVLEMPYRPMIIGSGQANELAHTYRLGGL 307

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           +CLAGD+ G++ FE+P+K GDR+ F D+A Y++ + + FNG+N+P+I   N +  IK IR
Sbjct: 308 TCLAGDVIGDYSFEQPLKPGDRLVFTDMAHYSMVKNHMFNGVNLPSIVSYNDEEGIKVIR 367

Query: 356 EFSYNDYYNNLS 367
           EF + DY   LS
Sbjct: 368 EFKFEDYSGRLS 379


>gi|330809265|ref|YP_004353727.1| carboxynorspermidine decarboxylase [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327377373|gb|AEA68723.1| carboxynorspermidine decarboxylase [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 365

 Score =  275 bits (702), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 212/367 (57%), Positives = 277/367 (75%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MIKTPYYLIDKQKLL N+    Y+R+ +G K LLALKCFA W +FD + QYMDGTTSSSL
Sbjct: 1   MIKTPYYLIDKQKLLANMQKIAYVREQSGAKALLALKCFATWSVFDLMQQYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           YE+ LG +KF GETHAY+VA+ D EI+ +L+NCD IIFN++ QL ++ + +    K  GL
Sbjct: 61  YELKLGRQKFAGETHAYSVAWADDEIEEMLANCDKIIFNSIGQLQRYTEAS--AGKVRGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP VS S ++LADP RPFSRLGE    KIE  I++++G MFHNNCEN  F  F  ML 
Sbjct: 119 RVNPQVSSSDYLLADPARPFSRLGEWDPVKIEQVIEHISGFMFHNNCENGDFGLFDQMLG 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            IE+ FGH + ++EW+SLGGGIHFT + Y +  FC RLK FS+KY VQ+YLEPGEA +T 
Sbjct: 179 TIEERFGHLLHKVEWVSLGGGIHFTGEGYALDAFCARLKAFSQKYGVQVYLEPGEAAITQ 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           + +L  TVLD   N K+L +VDSS+EAH+ D L+Y+  A + P+ G +T MVCG+SCLAG
Sbjct: 239 SASLEVTVLDTLYNGKHLAVVDSSIEAHMLDLLIYRLDAKMAPSEGEHTYMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGE+ F++P+ IGDR+SF D AGY + +KNWFNG+ MP+I VK +DG+++ +REF Y+
Sbjct: 299 DIFGEYQFDRPLSIGDRLSFIDAAGYTMVKKNWFNGLKMPSIVVKQLDGSVEVVREFVYD 358

Query: 361 DYYNNLS 367
           DY ++LS
Sbjct: 359 DYLSSLS 365


>gi|171912952|ref|ZP_02928422.1| carboxynorspermidine decarboxylase [Verrucomicrobium spinosum DSM
           4136]
          Length = 386

 Score =  275 bits (702), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 129/374 (34%), Positives = 205/374 (54%), Gaps = 9/374 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y++D   L  NL     +++ +G K+LLALK F+ +  F  + +Y+ G  +S L 
Sbjct: 14  VATPAYVVDLALLKKNLTLLHEVQEASGAKILLALKGFSMFSTFGLVREYLHGCCASGLN 73

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK---AQKLHKKI 118
           E +L H +FG E H Y  A+K+ E++ +L     I FN+++Q  +FK     A+      
Sbjct: 74  EALLAHHEFGKEVHVYCPAFKEAEMEQILPIACHISFNSLAQWQRFKPVLEGAEGNRPSP 133

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
           GLR+NP +S  +  L DP  P  RLG +  +   +++  + GL FH  CE  S      +
Sbjct: 134 GLRVNPELSTVEVALYDPCSPGCRLGTRDVELEGADLTGLEGLHFHALCEQNS-DVLERV 192

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
           ++++E+ F  F+ Q++W+++GGG H T   Y V+   + +K F E++ V++YLEPGEAI 
Sbjct: 193 IESVERRFPKFLKQVKWVNMGGGHHITKPGYDVERLVRIVKAFRERHDVEVYLEPGEAIA 252

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCG 294
            NT  L T+VLDI    +   I+D+S   H+PD L       I     P    YT  + G
Sbjct: 253 LNTGYLVTSVLDIVGAEEKTAILDTSATCHMPDVLEMPYRPQIIGAGLPGEHGYTYKLGG 312

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTIKA 353
            SCLAGD+ G + F +P+ +G ++ F D+  Y + +   FNG+  P I   +   G ++ 
Sbjct: 313 TSCLAGDVIGAYSFPEPLHLGQKLIFTDMGHYTMVKTTTFNGVPHPDIDTYDPATGELRV 372

Query: 354 IREFSYNDYYNNLS 367
           +R F Y D+ N LS
Sbjct: 373 VRRFGYEDFRNRLS 386


>gi|304311735|ref|YP_003811333.1| Carboxynorspermidine decarboxylase [gamma proteobacterium HdN1]
 gi|301797468|emb|CBL45688.1| Carboxynorspermidine decarboxylase [gamma proteobacterium HdN1]
          Length = 384

 Score =  275 bits (702), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 130/378 (34%), Positives = 195/378 (51%), Gaps = 13/378 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +++P Y++D+  L  NL     + ++AGV++++A K FA W  F  + +Y+ G T+SS +
Sbjct: 8   VESPCYVLDEALLRQNLQLIRSVAESAGVEIIVAFKGFAMWSAFPVVREYVRGATASSPH 67

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL------H 115
           E  L  E+     H Y+ AY + E D +      I FN+++Q  +F+   +K       H
Sbjct: 68  EARLAFEEMKTLAHTYSPAYVEREFDEICQFSSHITFNSLAQFERFQPLVKKFEQQAGRH 127

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175
              GLRINP  +     L +P  P SRLG       +   + + GL FH  CE+ SF   
Sbjct: 128 ISFGLRINPEFAVVATDLYNPCAPGSRLGIAVDHLPKQLPEGIEGLHFHALCESNSFD-L 186

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
              L  IE++FGH + QI+W ++GGG   T K Y V    + L  F EK+ ++I LEPG 
Sbjct: 187 ENALAEIERKFGHLLPQIQWFNMGGGHLMTRKGYDVAHLIRVLTAFREKWGLKIILEPGS 246

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTGPY-----T 289
           A   +T  L + V+DI EN      + D S  AH+PD L       I            T
Sbjct: 247 AFAWDTGVLVSQVVDIVENQGIKTAILDVSFTAHMPDCLEMPYKPRIRGAHQEPVANLPT 306

Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349
             + G SCL+GD  G++ F  P+K+GD I FED+  Y + +   FNG+  P+IA+     
Sbjct: 307 YRIGGNSCLSGDFIGDWSFGAPLKVGDTIVFEDMIHYTMVKTTTFNGVPHPSIAIWRDGQ 366

Query: 350 TIKAIREFSYNDYYNNLS 367
            ++ +R F+Y DY N LS
Sbjct: 367 GLQVVRRFTYEDYRNRLS 384


>gi|257125605|ref|YP_003163719.1| carboxynorspermidine decarboxylase [Leptotrichia buccalis C-1013-b]
 gi|257049544|gb|ACV38728.1| carboxynorspermidine decarboxylase [Leptotrichia buccalis C-1013-b]
          Length = 395

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 141/383 (36%), Positives = 230/383 (60%), Gaps = 18/383 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP +++D++ L  NL+T   +    G K+LLA K F+ +  +  +++Y++GTT+SSL+
Sbjct: 14  LPTPAFIVDERLLKRNLETLKSVIDRTGCKILLAQKGFSMFYFYLLISEYLNGTTASSLF 73

Query: 62  EVMLGHEKF-------GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114
           E  LG+E+          ETH +N +Y+D E D ++   + I+FN+ +Q  KFK K ++ 
Sbjct: 74  EARLGYEEMELKNPGKKLETHIFNPSYRDDEFDEIMEITNHIVFNSFNQWKKFKSKVKEF 133

Query: 115 HKK------IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE 168
            +K       GLR+NP  S  +  + +P   FSR G   ++  E EI+ ++G  FH  CE
Sbjct: 134 EEKNGKKISCGLRLNPEFSEVETEIYNPAGRFSRFGVTLENFKEDEIEGLDGFHFHALCE 193

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
             S      +LK  E++FG ++  ++W++ GGG H T +DY ++   + +    EKY+V+
Sbjct: 194 QNS-DALENVLKIFEQKFGKYLYNMKWLNFGGGHHITREDYDIEKLVKCINYIKEKYNVE 252

Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPN 284
           +YLEPGEA+  NT  L + VLDI++N  +++++D+S   H+PD +       I     PN
Sbjct: 253 VYLEPGEAVALNTGFLVSEVLDITKNEMDILLMDTSASCHMPDVIEMPYRPFIFGSGMPN 312

Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344
              YT  + G +CLAGDI G++ F++PVK+GD++ F D+A Y++ + N FNGIN+P IAV
Sbjct: 313 EKKYTYRLGGPTCLAGDIIGDYSFDEPVKVGDKLIFTDMAHYSMVKTNTFNGINLPVIAV 372

Query: 345 KNVDGTIKAIREFSYNDYYNNLS 367
               G ++ IR+F Y D+ N LS
Sbjct: 373 YTEKGGVEVIRKFEYEDFRNRLS 395


>gi|315185867|gb|EFU19632.1| carboxynorspermidine decarboxylase [Spirochaeta thermophila DSM
           6578]
          Length = 385

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 124/373 (33%), Positives = 208/373 (55%), Gaps = 8/373 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P +++D+  +  NL     +++ +G ++LLALK FA W +   ++ Y+ GT +S ++
Sbjct: 14  VPSPCFVVDRDAVEENLKILDRVQRESGARVLLALKGFAMWSLAPLVSSYLSGTCASGVW 73

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI--G 119
           E  LG E FGG    Y  AYK+ E+  +L+  D +IFN+ +Q  +F+       +++  G
Sbjct: 74  EARLGRECFGGIVSTYGPAYKEEEVRELLTLTDHLIFNSFAQWERFRSLLGTAPRRVEAG 133

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +R+NP  S +   + DP+ P SRLG          +  ++GL FH  CE         +L
Sbjct: 134 IRVNPERSGAPAAIYDPSGPNSRLGVVRSRFRPELLDGISGLHFHTLCEQN-VDALETVL 192

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
           +  E+ FG F+ ++ W++ GGG H T  DY V      +K+F  +Y V +YLEPGEAI  
Sbjct: 193 QAFEERFGEFVPRMRWVNWGGGHHITRPDYDVDRLIDLVKDFRSRYGVDVYLEPGEAIAL 252

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGR 295
            T  L   V+DI EN   + ++D+S   H+PD L       ++    P   PYT  + G 
Sbjct: 253 GTGVLVAEVVDIVENGMRIAVLDTSATTHMPDVLEMPYRPEVWGAGLPGERPYTYRLGGV 312

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK-NVDGTIKAI 354
           SCLAGD+ G++ F++P+++GDR+ F+D+A Y + +   FNG+ +P+I +  + + +   +
Sbjct: 313 SCLAGDVIGDYSFDRPLEVGDRLVFDDMAHYTMVKTTTFNGVKLPSIGIWSSKEQSFTLV 372

Query: 355 REFSYNDYYNNLS 367
           R F Y ++   LS
Sbjct: 373 RSFGYEEFKRRLS 385


>gi|256159037|ref|ZP_05456870.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella ceti M490/95/1]
 gi|256254391|ref|ZP_05459927.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella ceti B1/94]
 gi|261221555|ref|ZP_05935836.1| carboxynorspermidine decarboxylase [Brucella ceti B1/94]
 gi|265997518|ref|ZP_06110075.1| carboxynorspermidine decarboxylase [Brucella ceti M490/95/1]
 gi|260920139|gb|EEX86792.1| carboxynorspermidine decarboxylase [Brucella ceti B1/94]
 gi|262551986|gb|EEZ07976.1| carboxynorspermidine decarboxylase [Brucella ceti M490/95/1]
          Length = 365

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 224/367 (61%), Positives = 276/367 (75%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MI+TPYYLIDK KL  N++   Y+R+ +G K LLALKCFA W +FD +++YMD TTSSSL
Sbjct: 1   MIQTPYYLIDKTKLKRNMEKIAYVREKSGAKALLALKCFATWSVFDLMSEYMDSTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            EV LGHEKFGGETHAY+VAY D EID V+S+ D IIFN++ QL +F DKA  +    GL
Sbjct: 61  NEVRLGHEKFGGETHAYSVAYADHEIDEVISHADKIIFNSIGQLERFADKASGIK--RGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP VS S F LADP RPFSRLGE    K+E  +  + G M HNNCEN  F  F  ML 
Sbjct: 119 RLNPGVSSSSFDLADPARPFSRLGEWDVAKVEKVMDRITGFMIHNNCENSDFSLFDRMLS 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
           +IE++FG  + ++EW+SLGGGIHFT +DYPV  FC RLK FSEK+ VQ+YLEPGEA +T 
Sbjct: 179 DIEEKFGSLLHRVEWVSLGGGIHFTGEDYPVDAFCARLKSFSEKFGVQVYLEPGEASITR 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           TTTL  TVLD   N KNL IVDSS+EAH+ D L+Y+E A + PN G ++ MVCG+SCLAG
Sbjct: 239 TTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIYREKAKMAPNNGGHSYMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGEF F+KP+ IGDR+SFED AGY + +KNWFNG+ MP IAV+ +DGT+K +REF Y 
Sbjct: 299 DIFGEFTFDKPLAIGDRLSFEDAAGYTMVKKNWFNGVKMPAIAVRELDGTVKLVREFDYA 358

Query: 361 DYYNNLS 367
           D+  +LS
Sbjct: 359 DFEGSLS 365


>gi|330504767|ref|YP_004381636.1| carboxynorspermidine decarboxylase [Pseudomonas mendocina NK-01]
 gi|328919053|gb|AEB59884.1| carboxynorspermidine decarboxylase [Pseudomonas mendocina NK-01]
          Length = 365

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 217/367 (59%), Positives = 280/367 (76%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MI+TPYYLIDKQKLL NL+   Y+R+N+G K LLALKCFA W +FD + QYMDGTTSSSL
Sbjct: 1   MIQTPYYLIDKQKLLVNLEKIAYVRENSGAKALLALKCFATWSVFDLMQQYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           YE+ LG +KF GETHAY+VA+ D EI+ +++NCD IIFN++ QL +F   A+      GL
Sbjct: 61  YELKLGRQKFAGETHAYSVAWADDEIEEMVANCDKIIFNSIGQLERF--AARTEGTIRGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP VS S ++LADP RPFSRLGE    KIE  +  ++G MFHNNCEN SF  F  ML 
Sbjct: 119 RVNPQVSSSDYLLADPARPFSRLGEWDPAKIEQVMGQISGFMFHNNCENGSFELFDKMLT 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            IE+ FGH I Q+EW+SLGGGIHFT + YP+  FC RLK FSEKY VQ+YLEPGEA +T 
Sbjct: 179 TIEERFGHLIAQVEWVSLGGGIHFTGEGYPIDAFCARLKAFSEKYGVQVYLEPGEAAITL 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           + +L  TVLD   N K+L +VDSS+EAH+ D L+Y+ +A + PN G +T MVCG+SCLAG
Sbjct: 239 SASLEVTVLDTLYNGKHLAVVDSSIEAHMLDLLIYRLNAKMAPNDGEHTYMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGE+ F+KP++IGDR+SF D AGY + +KNWFNG+ MP+I VK +DG+++ +R+F ++
Sbjct: 299 DIFGEYQFDKPLQIGDRLSFVDAAGYTMVKKNWFNGLKMPSIVVKQLDGSVEVVRQFEFD 358

Query: 361 DYYNNLS 367
           DY ++LS
Sbjct: 359 DYLSSLS 365


>gi|149912637|ref|ZP_01901171.1| carboxynorspermidine decarboxylase [Roseobacter sp. AzwK-3b]
 gi|149813043|gb|EDM72869.1| carboxynorspermidine decarboxylase [Roseobacter sp. AzwK-3b]
          Length = 389

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 116/368 (31%), Positives = 195/368 (52%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P +++D+  +  NL     + + +G ++L ALK F+ + +   +  Y+ GT +S L+
Sbjct: 23  VPSPCFVVDEVAIEANLKALADVGERSGARMLSALKAFSMFSLAPLVRTYLSGTCASGLF 82

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LG E++GGE   ++  YK  EID ++   D ++FN+ +Q ++F  +A      +GLR
Sbjct: 83  EARLGREEYGGEVTTFSTGYKPSEIDEIIQLSDHLVFNSPAQKDRFGPRAAAAGVSVGLR 142

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP  S  +    DP +P SRLG        + ++ V GL  H  CE   F   +     
Sbjct: 143 INPQHSEGEVPKYDPCQPCSRLGFPVTQLDATTLEGVEGLHMHTLCEQG-FEPLARTWAA 201

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           +E     ++ Q++WI+LGGG H T  DY  +     +++   ++ V++YLEPGEA+  + 
Sbjct: 202 VEPLIAPYLGQLKWINLGGGHHITRDDYDREALIAFIRDLRTRHGVEVYLEPGEAVALDA 261

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN-TGPYTAMVCGRSCLAG 300
             L   +LD   N   + I D S   H+PD +       +       +T  + G SCLAG
Sbjct: 262 GILVGEILDTFHNTMPIAITDISATCHMPDVIEAPYRPALLDEADAGHTYRLGGPSCLAG 321

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV-DGTIKAIREFSY 359
           DI G++ +  P++IG R +F D A Y++ + N FNG+ +P IA+ N     ++ +R+F Y
Sbjct: 322 DIIGDYTWAAPLEIGQRFAFLDQAHYSMVKTNTFNGVPLPAIALWNSRTDDLRIVRDFGY 381

Query: 360 NDYYNNLS 367
            D+   LS
Sbjct: 382 QDFKERLS 389


>gi|307301480|ref|ZP_07581240.1| carboxynorspermidine decarboxylase [Sinorhizobium meliloti BL225C]
 gi|306903537|gb|EFN34125.1| carboxynorspermidine decarboxylase [Sinorhizobium meliloti BL225C]
          Length = 365

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 215/367 (58%), Positives = 273/367 (74%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MI+TPYYLIDK KL  N++   ++R+ +G K LLALKCFA W +FD +  YMDGTTSSSL
Sbjct: 1   MIETPYYLIDKAKLTRNMERIAHVREKSGAKALLALKCFATWSVFDLMRDYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           +EV LG E+FG ETHAY+VAY D EID V+S+ D IIFN++SQL +F DKA       GL
Sbjct: 61  FEVRLGRERFGKETHAYSVAYGDNEIDDVVSHADKIIFNSISQLERFADKA--AGIARGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP VS S F LADP RPFSRLGE    K+E  +  +NG M HNNCENK F  F  ML 
Sbjct: 119 RLNPQVSSSSFDLADPARPFSRLGEWDVPKVERVMDRINGFMIHNNCENKDFGLFDRMLG 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            IE+ FG  I +++W+SLGGGIHFT  DYPV  F  RL+ FS++Y VQIYLEPGEA +T 
Sbjct: 179 EIEERFGALIARVDWVSLGGGIHFTGDDYPVDAFSARLRAFSDRYGVQIYLEPGEASITK 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           +TTL  TVLD   N KNL IVDSS+EAH+ D L+Y+E+A + PN G ++ M+CG+SCLAG
Sbjct: 239 STTLEVTVLDTLYNGKNLAIVDSSIEAHMLDLLIYRETAKVLPNEGSHSYMICGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           D+FGEF F + +K+GDRISF+D AGY + +KNWFNG+ MP IA++ +DG+++ +REF+Y 
Sbjct: 299 DVFGEFRFAEELKVGDRISFQDAAGYTMVKKNWFNGVKMPAIAIRELDGSVRTVREFTYA 358

Query: 361 DYYNNLS 367
           DY  +LS
Sbjct: 359 DYEQSLS 365


>gi|167753612|ref|ZP_02425739.1| hypothetical protein ALIPUT_01891 [Alistipes putredinis DSM 17216]
 gi|167658237|gb|EDS02367.1| hypothetical protein ALIPUT_01891 [Alistipes putredinis DSM 17216]
          Length = 376

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 134/372 (36%), Positives = 195/372 (52%), Gaps = 8/372 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P +++D+Q L  NL     +R+ +G ++++ALK  A W +F  L Q+ DG T+SSL 
Sbjct: 7   LPSPCFVLDEQLLDRNLAVIDRVRRESGAEVIVALKACAMWSIFPELAQHSDGATASSLA 66

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+FG   H Y   Y D  I+ +L   D I FN+V+Q  +F   A       GLR
Sbjct: 67  EARLVFEEFGRPAHTYAPVYTDRNIEEILDCSDHITFNSVAQFERFGQMALLRGISCGLR 126

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP  S  +  L +P  P SRLG    +  +     V GL FH  CE++        L  
Sbjct: 127 INPGYSPVETDLYNPCVPGSRLGIPAGEL-KELPAGVEGLHFHVLCESR-PEHLRLALDA 184

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240
           +EK FG F+ +I+W+++GGG   T KDY   +  + L+EF  KY   ++ LEPG A    
Sbjct: 185 VEKRFGRFLDRIKWLNMGGGHLMTHKDYDCDELIRILQEFKAKYPNLRLILEPGSAFTWR 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVE-AHVPDYLLYQESATIYPNTGPYT----AMVCGR 295
           T  L +TV DI EN      +       H+PD L       I     P        + G 
Sbjct: 245 TGYLVSTVEDIVENGGVRTAMLDVSFACHMPDCLEMPYKPAILGARDPEPGEKGWRMGGN 304

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           SCLAGD +G++ F++ +++GDRI FED+  Y + +   FNG+  P IA+   DG I+ IR
Sbjct: 305 SCLAGDYYGDWIFDRDLRVGDRIVFEDMIHYTMVKTTMFNGVAHPAIAIVRRDGAIEIIR 364

Query: 356 EFSYNDYYNNLS 367
           EF Y D+ + +S
Sbjct: 365 EFGYEDFKSRMS 376


>gi|310641295|ref|YP_003946053.1| carboxynorspermidine decarboxylase [Paenibacillus polymyxa SC2]
 gi|309246245|gb|ADO55812.1| Carboxynorspermidine decarboxylase [Paenibacillus polymyxa SC2]
          Length = 379

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 144/373 (38%), Positives = 219/373 (58%), Gaps = 8/373 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P YL+D++ L+ NL+    +++  G  +LLALK F+ +  F  + +Y+ G TSSSL+
Sbjct: 8   LPSPCYLVDERLLVKNLEVLNSVQERTGCSILLALKGFSMFSTFPLVGKYLKGVTSSSLF 67

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ---KLHKKI 118
           E  LG EK   E H Y  AY D E D +L   D I+FN+  QLN+FK + Q        I
Sbjct: 68  EARLGREKMDKEVHVYAPAYVDSEFDELLEYVDHIVFNSFDQLNRFKSRVQGVTSKKIDI 127

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
           G+R+NP  S  +  L DP    SR+G    +    ++  V+G+ FH  CE  S       
Sbjct: 128 GIRVNPEYSEIETPLYDPCYNNSRMGVTLANFRPEDLDGVDGIHFHTMCEQNS-DTLERT 186

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
           +K ++++FG +I Q++W++ GGG H T +DY +    + ++ F +KY VQ+YLEPGEAI 
Sbjct: 187 IKVVDEKFGPYIKQMKWLNFGGGHHITREDYDLDTLVRCIQYFQDKYGVQVYLEPGEAIA 246

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----YTAMVCG 294
            NT  L  TVLD  +N  ++ I+D+S E H+PD L       I     P    +T  + G
Sbjct: 247 LNTGYLVATVLDTMKNGMDIAILDTSAECHMPDVLAMPYRPNIIGAGKPGEYAHTYRLGG 306

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            +CLAGD+ G++ F++P+K GD++ F D+A Y + + + FNG+N+P IA  N +  IK I
Sbjct: 307 LTCLAGDVIGDYSFKEPLKPGDKLVFCDMAHYTMVKNHMFNGVNLPAIASYNDEEGIKVI 366

Query: 355 REFSYNDYYNNLS 367
           R+FSY D+ + LS
Sbjct: 367 RQFSYEDFSSRLS 379


>gi|331082380|ref|ZP_08331506.1| carboxynorspermidine decarboxylase [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330400866|gb|EGG80467.1| carboxynorspermidine decarboxylase [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 378

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 136/369 (36%), Positives = 218/369 (59%), Gaps = 6/369 (1%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TPY+L+D+++LL+NL+    + + +G K+LLA K F+ +  +  + +Y+ GTT+S LYE 
Sbjct: 11  TPYFLVDEKRLLHNLEILKSVSEKSGCKILLAQKAFSMFYAYPLMREYLAGTTASGLYEA 70

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
            LG E+FG ETH ++ AY++ E D +L   D ++FN+ +Q  KF  KA+   K +GLRIN
Sbjct: 71  KLGCEEFGKETHVFSPAYREKEFDEILKYADDVVFNSPTQFKKFAKKAKAAGKSVGLRIN 130

Query: 124 PSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           P  S      + DP   FSRLG   ++  E  +  ++GL FH  CE          LK +
Sbjct: 131 PQCSTQEGHAIYDPCADFSRLGTTLENFEEELLSELDGLHFHTLCEQG-ADALEITLKAV 189

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTT 242
           E++FG ++ Q++W++LGGG H T  DY V+   + ++   E Y V++YLEPGEA+V +  
Sbjct: 190 EEKFGKYLYQMKWLNLGGGHHITKADYDVEALIRMVRHLKETYDVEVYLEPGEAVVLDAG 249

Query: 243 TLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGRSCL 298
            L + VL++  N  ++ I+D+S   H+PD L       +           T  + G +CL
Sbjct: 250 FLVSQVLEVVHNGMDIAILDTSAACHMPDVLEMPYRPPVKDSGLAGEKACTVRLAGPTCL 309

Query: 299 AGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFS 358
           AGD+ G++ F+ P+K GD + FED+A Y + + N FNG+ +P I  ++ +G +K ++ F 
Sbjct: 310 AGDVMGDYSFDAPLKEGDLVVFEDMALYTMVKTNTFNGMPLPDIVWRDRNGEMKLVKSFG 369

Query: 359 YNDYYNNLS 367
           Y D+   LS
Sbjct: 370 YEDFKGRLS 378


>gi|295090770|emb|CBK76877.1| carboxynorspermidine decarboxylase [Clostridium cf. saccharolyticum
           K10]
          Length = 395

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 132/370 (35%), Positives = 219/370 (59%), Gaps = 6/370 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TPY+LID+++L  NL+    ++++ G ++LLA K F+ +  +  + +Y+ G+T+S LY
Sbjct: 26  VSTPYFLIDEERLRKNLEILKKVQEDTGCRILLAQKAFSTFFAYPLIREYLAGSTASGLY 85

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LG E+FGGETH ++ AY++ E + +LS  D ++FN+ SQL K+ ++A+   K +GLR
Sbjct: 86  EARLGREEFGGETHVFSPAYREDEFEELLSYADHLVFNSPSQLRKYGERARAAGKSVGLR 145

Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +NP  S      + DP  P SRLG   ++  ES +  ++GL FH  CE  S         
Sbjct: 146 VNPECSTQEGHAIYDPCAPGSRLGTTAENFDESLLPLLDGLHFHTLCEQNS-DALEQTAA 204

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
             E++FG ++  ++W++LGGG H T  DY V+   + +  F + Y + +YLEPGEA+V N
Sbjct: 205 AFEEKFGKYLGNMKWLNLGGGHHITRDDYDVERLERIISHFRDTYGLTVYLEPGEAVVLN 264

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGRS 296
              L +TVL+  +N  ++ I+D+S   H+PD L       +     P    +T  + G +
Sbjct: 265 AGFLVSTVLETVKNGIDIAILDTSAACHMPDVLEMPYRPPVSDSGLPGEKAFTFRLAGPT 324

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CLAGD+ G++ F+ P+  G ++ FED+A Y + + N FNG+ +P+I  + +D     I++
Sbjct: 325 CLAGDVIGDYSFDTPLGAGSQVVFEDMALYTMVKTNTFNGMALPSIVWRGLDKRETLIKK 384

Query: 357 FSYNDYYNNL 366
           F Y D+   L
Sbjct: 385 FGYEDFKGRL 394


>gi|260588051|ref|ZP_05853964.1| carboxynorspermidine decarboxylase [Blautia hansenii DSM 20583]
 gi|260541578|gb|EEX22147.1| carboxynorspermidine decarboxylase [Blautia hansenii DSM 20583]
          Length = 378

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 136/369 (36%), Positives = 217/369 (58%), Gaps = 6/369 (1%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TPY+L+D+++LL+NL+    + + +G K+LLA K F+ +  +  + +Y+ GTT+S LYE 
Sbjct: 11  TPYFLVDEKRLLHNLEILKSVSEKSGCKILLAQKAFSMFYAYPLMREYLAGTTASGLYEA 70

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
            LG E+FG ETH ++ AY++ E D +L   D ++FN+ +Q  KF  KA+   K +GLRIN
Sbjct: 71  KLGCEEFGKETHVFSPAYREKEFDEILKYADDVVFNSPTQFKKFAKKAKAAGKSVGLRIN 130

Query: 124 PSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           P  S      + DP   FSRLG   ++  E  +  ++GL FH  CE          LK +
Sbjct: 131 PQCSTQEGHAIYDPCADFSRLGTTLENFEEELLSELDGLHFHTLCEQG-ADALEITLKAV 189

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTT 242
           E++FG ++ Q++W++LGGG H T  DY V    + ++   E Y V++YLEPGEA+V +  
Sbjct: 190 EEKFGKYLYQMKWLNLGGGHHITKADYDVDALIRMVRHLKETYDVEVYLEPGEAVVLDAG 249

Query: 243 TLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGRSCL 298
            L + VL++  N  ++ I+D+S   H+PD L       +           T  + G +CL
Sbjct: 250 FLVSQVLEVVHNGMDIAILDTSAACHMPDVLEMPYRPPVKDSGLAGEKACTVRLAGPTCL 309

Query: 299 AGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFS 358
           AGD+ G++ F+ P+K GD + FED+A Y + + N FNG+ +P I  ++ +G +K ++ F 
Sbjct: 310 AGDVMGDYSFDAPLKEGDLVVFEDMALYTMVKTNTFNGMPLPDIVWRDRNGEMKLVKSFG 369

Query: 359 YNDYYNNLS 367
           Y D+   LS
Sbjct: 370 YEDFKGRLS 378


>gi|332716887|ref|YP_004444353.1| carboxynorspermidine decarboxylase [Agrobacterium sp. H13-3]
 gi|325063572|gb|ADY67262.1| carboxynorspermidine decarboxylase [Agrobacterium sp. H13-3]
          Length = 365

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 219/367 (59%), Positives = 277/367 (75%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           M++TPYYLIDK KLL N++   Y+R+ +G K LLALKCFA W +FD ++QYMDGTTSSSL
Sbjct: 1   MLQTPYYLIDKTKLLRNMEKIAYVREKSGAKALLALKCFATWSVFDFMSQYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           YEV LG EKF GETHAY+VAY D EID V+SN D IIFN++SQL +F +KA  +    GL
Sbjct: 61  YEVRLGREKFSGETHAYSVAYADYEIDEVISNADKIIFNSISQLERFAEKASGIT--RGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP VS S F LADP RPFSRLGE    K++  +  ++G M HNNCEN  F  F  ML 
Sbjct: 119 RLNPQVSSSSFDLADPARPFSRLGEWDVAKVDKVMDRISGFMIHNNCENGDFSLFDRMLT 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            IE++FG  +++ EW+SLGGGIHFT  +YP+  FC RL  FSEKY VQ+YLEPGEA +T 
Sbjct: 179 QIEEKFGSLLSRAEWVSLGGGIHFTGDNYPLDQFCDRLAAFSEKYGVQVYLEPGEASITK 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           +TTL  TVLD   N KNL IVDSS+EAH+ D L+Y+E+A + PN G +  MVCG+SCLAG
Sbjct: 239 STTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIYRETAKVLPNEGEHPYMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFG+F F+K +K+GDRISFED AGY + +KNWFNG+ MP IA+K +DG+++A+REF + 
Sbjct: 299 DIFGDFRFDKELKVGDRISFEDAAGYTMVKKNWFNGVKMPAIAIKELDGSVRAVREFDFA 358

Query: 361 DYYNNLS 367
           D+  +LS
Sbjct: 359 DFEQSLS 365


>gi|323692273|ref|ZP_08106514.1| carboxynorspermidine decarboxylase [Clostridium symbiosum
           WAL-14673]
 gi|323503688|gb|EGB19509.1| carboxynorspermidine decarboxylase [Clostridium symbiosum
           WAL-14673]
          Length = 383

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 132/378 (34%), Positives = 222/378 (58%), Gaps = 12/378 (3%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           ++KTPYYL+D+  L  NL+    +   AG K+LLA K F+ + ++  L +Y+ G+ +S L
Sbjct: 7   LLKTPYYLVDETLLKQNLEILREVSGRAGCKILLAQKAFSMFSVYPLLREYLAGSAASGL 66

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           +E  LGHE+FGGETH ++ AY++ E D +L   D ++FN+ SQ+ K+ ++ +   K  GL
Sbjct: 67  FEARLGHEEFGGETHVFSAAYREDEFDEILRYADHVVFNSPSQVKKYGERVKAAGKSAGL 126

Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSFL 173
           R+NP  S      + DP  P SRLG   ++   +       +  ++G  FH  CE  S  
Sbjct: 127 RLNPECSTQEGHAIYDPCSPGSRLGTTKRNLESAGKFETELLPYLDGFHFHTLCEQNS-D 185

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
                L  +E++FG+++ +++W++LGGG H T +DY  +   + + +  EKY ++IYLEP
Sbjct: 186 ALETTLAALEEKFGNYLPRLKWLNLGGGHHITREDYDRERLIRLILKLREKYGLEIYLEP 245

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYT 289
           GEA+V N   L +TVL+  EN   + ++D+S   H+PD L       +     P   P+T
Sbjct: 246 GEAVVLNAGFLVSTVLETMENGIEIAVLDTSAACHMPDVLEMPYRPPVLGGGEPGEKPHT 305

Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349
             + G +CLAGD+ G++ F+ P+  G ++ F D+A Y + + N FNG+ +P++ ++++ G
Sbjct: 306 YRLGGPTCLAGDVIGDYSFDTPLTEGKKVIFSDMALYTMVKNNTFNGMPLPSLVLRDLQG 365

Query: 350 TIKAIREFSYNDYYNNLS 367
             + ++EF Y D+   LS
Sbjct: 366 RFRPVKEFGYEDFKGRLS 383


>gi|170721307|ref|YP_001748995.1| carboxynorspermidine decarboxylase [Pseudomonas putida W619]
 gi|169759310|gb|ACA72626.1| carboxynorspermidine decarboxylase [Pseudomonas putida W619]
          Length = 365

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 215/367 (58%), Positives = 281/367 (76%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MIKTPYYLIDK KLL+N++   Y+R+++G K LLALKCFA W +FD + QYMDGTTSSSL
Sbjct: 1   MIKTPYYLIDKTKLLSNMEKIAYVREHSGAKALLALKCFATWSVFDLMQQYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           YE+ LG +KF GETHAY+VA+ D E++ +L NCD IIFN++ QL +F +K++      GL
Sbjct: 61  YELKLGRQKFAGETHAYSVAWADDEVEEMLENCDKIIFNSIGQLQRFAEKSEGKV--RGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP VS S ++LADP RPFSRLGE   +KIE  I  ++G MFHNNCEN  F  F  ML 
Sbjct: 119 RVNPQVSSSDYLLADPARPFSRLGEWDPEKIEKVISQISGFMFHNNCENGDFGLFDKMLT 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
           +IE+ FGH + ++EW+SLGGGIHFT +DY V  FC RLK FS+ Y VQ+YLEPGEA +TN
Sbjct: 179 HIEERFGHLLHKVEWVSLGGGIHFTGEDYAVDAFCARLKAFSQTYGVQVYLEPGEAAITN 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           + +L  TVLD   N KNL +VDSS+EAH+ D L+Y+ +A + PN G +T MVCG+SCLAG
Sbjct: 239 SASLEVTVLDTLYNGKNLAVVDSSIEAHLLDLLIYRLNAKMAPNDGEHTYMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGE+ F++P+ IGDR+SF D AGY + +KNWFNG+ MP+IAVK +DG+++ +REF + 
Sbjct: 299 DIFGEYQFDRPLAIGDRLSFIDTAGYTMVKKNWFNGLKMPSIAVKQLDGSVEVVREFGFE 358

Query: 361 DYYNNLS 367
           DY ++LS
Sbjct: 359 DYVSSLS 365


>gi|146306022|ref|YP_001186487.1| carboxynorspermidine decarboxylase [Pseudomonas mendocina ymp]
 gi|145574223|gb|ABP83755.1| carboxynorspermidine decarboxylase [Pseudomonas mendocina ymp]
          Length = 365

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 218/367 (59%), Positives = 280/367 (76%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MI+TPYYLIDKQKLL NL+   Y+R+N+G K LLALKCFA W +FD + QYMDGTTSSSL
Sbjct: 1   MIQTPYYLIDKQKLLVNLEKIAYVRENSGAKALLALKCFATWSVFDLMQQYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           YE+ LG +KF GETHAY+VA+ D EI+ +++NCD IIFN++ QL +F ++        GL
Sbjct: 61  YELKLGRQKFAGETHAYSVAWADDEIEEMVANCDKIIFNSIGQLERFAER--TEGTIRGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP VS S ++LADP RPFSRLGE   +KI   +  ++G MFHNNCEN SF  F  ML 
Sbjct: 119 RVNPQVSSSDYLLADPARPFSRLGEWDPEKIAKVMGQISGFMFHNNCENGSFELFDKMLS 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            IE+ FGH I Q+EW+SLGGGIHFT + YP+  FC RLK FSEKY VQ+YLEPGEA +T 
Sbjct: 179 TIEERFGHLIAQVEWVSLGGGIHFTGEGYPIDAFCARLKAFSEKYGVQVYLEPGEAAITL 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           + +L  TVLD   N KNL +VDSS+EAH+ D L+Y+ +A + PN G +T MVCG+SCLAG
Sbjct: 239 SASLEVTVLDTLYNGKNLAVVDSSIEAHMLDLLIYRLNAKMAPNDGEHTYMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGE+ F+KP+KIGDR+SF D AGY + +KNWFNG+ MP+I VK +DG+I+ +R+F ++
Sbjct: 299 DIFGEYQFDKPLKIGDRLSFIDAAGYTMVKKNWFNGLKMPSIVVKQLDGSIEVVRQFEFD 358

Query: 361 DYYNNLS 367
           DY ++LS
Sbjct: 359 DYLSSLS 365


>gi|313499053|gb|ADR60419.1| NspC [Pseudomonas putida BIRD-1]
          Length = 365

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 216/367 (58%), Positives = 280/367 (76%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MIKTPYYLIDK KLL+N++   Y+R+++G K LLALKCFA W +FD + QYMDGTTSSSL
Sbjct: 1   MIKTPYYLIDKTKLLSNMEKIAYVREHSGAKALLALKCFATWSVFDLMQQYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           +E+ LG +KF GETHAY+VA+ D E++ +L NCD IIFN++ QL +F D  Q   K  GL
Sbjct: 61  FELKLGRQKFAGETHAYSVAWADDEVEEMLENCDKIIFNSIGQLQRFAD--QSEGKVRGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP VS S ++LADP RPFSRLGE    KIE  I+ ++G MFHNNCEN  F  F  ML 
Sbjct: 119 RVNPQVSSSDYLLADPARPFSRLGEWDPAKIEQVIEQISGFMFHNNCENGDFGLFDKMLT 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
           +IE+ FGH + ++EW+SLGGGIHFT +DY V  FC RLK FSEKY VQ+YLEPGEA +TN
Sbjct: 179 HIEERFGHLLHKVEWVSLGGGIHFTGEDYAVDAFCARLKAFSEKYGVQVYLEPGEAAITN 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           + +L  TVLD   N K+L +VDSS+EAH+ D L+Y+ +A + PN G +T MVCG+SCLAG
Sbjct: 239 SASLEVTVLDTLYNGKHLAVVDSSIEAHLLDLLIYRLNAKMAPNDGEHTYMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGE+ F++P+ IGDR+SF D AGY + +KNWFNG+ MP+I VK +DG+++ +REF + 
Sbjct: 299 DIFGEYQFDRPLAIGDRLSFIDTAGYTMVKKNWFNGLKMPSIVVKQLDGSVEVVREFGFE 358

Query: 361 DYYNNLS 367
           DY ++LS
Sbjct: 359 DYVSSLS 365


>gi|26989648|ref|NP_745073.1| carboxynorspermidine decarboxylase [Pseudomonas putida KT2440]
 gi|148547977|ref|YP_001268079.1| carboxynorspermidine decarboxylase [Pseudomonas putida F1]
 gi|24984533|gb|AAN68537.1|AE016485_10 carboxynorspermidine decarboxylase [Pseudomonas putida KT2440]
 gi|148512035|gb|ABQ78895.1| carboxynorspermidine decarboxylase [Pseudomonas putida F1]
          Length = 365

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 215/367 (58%), Positives = 280/367 (76%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MIKTPYYLIDK KLL+N++   Y+R+++G K LLALKCFA W +FD + QYMDGTTSSSL
Sbjct: 1   MIKTPYYLIDKTKLLSNMEKIAYVREHSGAKALLALKCFATWSVFDLMQQYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           +E+ LG +KF GETHAY+VA+ D E++ +L NCD IIFN++ QL +F +  Q   K  GL
Sbjct: 61  FELKLGRQKFAGETHAYSVAWADDEVEEMLENCDKIIFNSIGQLQRFAE--QSEGKVRGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP VS S ++LADP RPFSRLGE    KIE  I+ ++G MFHNNCEN  F  F  ML 
Sbjct: 119 RVNPQVSSSDYLLADPARPFSRLGEWDPAKIEQVIEQISGFMFHNNCENGDFGLFDKMLT 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
           +IE+ FGH + ++EW+SLGGGIHFT +DY V  FC RLK FSEKY VQ+YLEPGEA +TN
Sbjct: 179 HIEERFGHLLHKVEWVSLGGGIHFTGEDYAVDAFCARLKAFSEKYGVQVYLEPGEAAITN 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           + +L  TVLD   N K+L +VDSS+EAH+ D L+Y+ +A + PN G +T MVCG+SCLAG
Sbjct: 239 SASLEVTVLDTLYNGKHLAVVDSSIEAHLLDLLIYRLNAKMAPNDGEHTYMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGE+ F++P+ IGDR+SF D AGY + +KNWFNG+ MP+I VK +DG+++ +REF + 
Sbjct: 299 DIFGEYQFDRPLAIGDRLSFIDTAGYTMVKKNWFNGLKMPSIVVKQLDGSVEVVREFGFE 358

Query: 361 DYYNNLS 367
           DY ++LS
Sbjct: 359 DYVSSLS 365


>gi|254713089|ref|ZP_05174900.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella ceti M644/93/1]
 gi|254716558|ref|ZP_05178369.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella ceti M13/05/1]
 gi|261218356|ref|ZP_05932637.1| carboxynorspermidine decarboxylase [Brucella ceti M13/05/1]
 gi|261320795|ref|ZP_05959992.1| carboxynorspermidine decarboxylase [Brucella ceti M644/93/1]
 gi|260923445|gb|EEX90013.1| carboxynorspermidine decarboxylase [Brucella ceti M13/05/1]
 gi|261293485|gb|EEX96981.1| carboxynorspermidine decarboxylase [Brucella ceti M644/93/1]
          Length = 365

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 224/367 (61%), Positives = 276/367 (75%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MI+TPYYLIDK KL  N++   Y+R+ +G K LLALKCFA W +FD +++YMDGTTSSSL
Sbjct: 1   MIQTPYYLIDKTKLKRNMEKIAYVREKSGAKALLALKCFATWSVFDLMSEYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            EV LGHEKFGGETHAY+VAY D EID V+S+ D IIFN++ QL +F DKA  +    GL
Sbjct: 61  NEVRLGHEKFGGETHAYSVAYADHEIDEVISHADKIIFNSIGQLERFADKASGIK--RGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP VS S F LADP RPFSRLGE    K+E  +  + G M HNNCEN  F  F  ML 
Sbjct: 119 RLNPGVSSSSFDLADPARPFSRLGEWDVAKVEKVMDRITGFMIHNNCENSDFSLFDRMLS 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
           +IE++FG  + ++EW+SLGGGIHFT +DYPV  FC RLK FSEK+ VQ+YLEPGEA +T 
Sbjct: 179 DIEEKFGSLLHRVEWVSLGGGIHFTGEDYPVDAFCARLKSFSEKFGVQVYLEPGEASITR 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           TTTL  TVLD   N KNL IVDSS+EAH+ D L+Y+E A + PN G ++ MVCG+SCLAG
Sbjct: 239 TTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIYREKAKMAPNNGGHSYMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGEF F+K + IGDR+SFED AGY + +KNWFNG+ MP IAV+ +DGT+K +REF Y 
Sbjct: 299 DIFGEFTFDKSLAIGDRLSFEDAAGYTMVKKNWFNGVKMPAIAVRELDGTVKFVREFDYA 358

Query: 361 DYYNNLS 367
           D+  +LS
Sbjct: 359 DFEGSLS 365


>gi|301062805|ref|ZP_07203403.1| carboxynorspermidine decarboxylase [delta proteobacterium NaphS2]
 gi|300443067|gb|EFK07234.1| carboxynorspermidine decarboxylase [delta proteobacterium NaphS2]
          Length = 385

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 131/373 (35%), Positives = 214/373 (57%), Gaps = 8/373 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP +++D+ +L  NL    +++   G ++LLALK FA + +F  L + + G  +SS +
Sbjct: 14  VSTPCFVVDEGRLRQNLAVLKHVQDRTGCRILLALKAFAMFSVFPLLGKTLHGVCASSPH 73

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--KIG 119
           E  LG+E+F GE H +  AY + ++  V+   + ++FN+ SQ ++F+   Q   K  + G
Sbjct: 74  EARLGYEEFKGEVHTFAAAYSEAQMRKVMRYSNVVVFNSFSQWDRFRPFLQNASKDIRCG 133

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +R+NP  S  K  L DP    SRLG +       ++  ++GL FH  CE+         L
Sbjct: 134 IRVNPEHSEGKVPLYDPCASGSRLGVRRSRFEGEDLTGISGLHFHTLCEHN-VDALERTL 192

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
           +  E++FG F+  + W++ GGG H T  DY V+  C+ + +F  +YS+Q+YLEPGEA+  
Sbjct: 193 RVFEEKFGSFLKGMTWVNFGGGHHITRPDYDVEQLCRLILDFKRRYSLQVYLEPGEAVAL 252

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGR 295
           N   L  TVLDI +N   + ++D+SV  H+PD L       +          YT  + G+
Sbjct: 253 NAGILVATVLDIVQNDMPIAVLDTSVPCHMPDVLEMPYRPEVACTGLPQEKAYTYRLTGQ 312

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTIKAI 354
           SCLAGD+ GE+ F++P+ +G R++F D+A Y + + N FNG+ +P IA+ +  + +++ I
Sbjct: 313 SCLAGDVAGEYSFDRPLHLGQRLAFLDMAHYTMVKTNTFNGVALPDIALYDHRNDSVQVI 372

Query: 355 REFSYNDYYNNLS 367
           R F Y DY   LS
Sbjct: 373 RTFGYEDYRMRLS 385


>gi|320529222|ref|ZP_08030314.1| carboxynorspermidine decarboxylase [Selenomonas artemidis F0399]
 gi|320138852|gb|EFW30742.1| carboxynorspermidine decarboxylase [Selenomonas artemidis F0399]
          Length = 380

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 122/369 (33%), Positives = 199/369 (53%), Gaps = 7/369 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP YL+ ++ L +NL+    I ++ G K+LLA KCF+ +  +  + +Y+ GTT+S +Y
Sbjct: 15  VPTPSYLVYEELLTHNLEILKGIAEHTGAKVLLAQKCFSMYYYYPLIGRYLAGTTASGIY 74

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+ G E H +  AY+  EI A+ + CD I+FN+ SQ  +F   A+      G+R
Sbjct: 75  EARLSQEEMGKENHVFKPAYEAEEITALAAICDHIVFNSFSQWERFGAAARAQGASCGIR 134

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP  S  +  + DP  P SRLG K  +  E+  + ++GL FH  CE       +  L  
Sbjct: 135 INPERSTQEHAIYDPCAPGSRLGVKIAEFPETLPEGIDGLHFHTLCEQG-ADALAVTLAA 193

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           +E++FG+++  ++W++ GGG H T  DY +    + ++   E Y V +YLEPGEA+  N 
Sbjct: 194 VEEKFGNYLHGLKWLNFGGGHHITRADYDIALLEELIRHVQETYDVAVYLEPGEAVALNA 253

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRSC 297
             L  +VLD+  +   ++   ++   H+PD +       +          +T  + G +C
Sbjct: 254 GYLAASVLDVRADGNVILNTSAA--CHMPDVIEMPYRPPVVGAGEAGEKAHTYTLAGPTC 311

Query: 298 LAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF 357
           LAGD  G + F+ P+  GDR+ F D+A Y + + N FNG+ +P I   +  G  + +R F
Sbjct: 312 LAGDTIGTYSFDAPLAPGDRVVFGDMAIYTMVKNNTFNGMPLPHIVAVDPSGAWEIVRSF 371

Query: 358 SYNDYYNNL 366
            Y D+   L
Sbjct: 372 GYEDFKMRL 380


>gi|319407852|emb|CBI81505.1| carboxynorspermidine decarboxylase [Bartonella sp. 1-1C]
          Length = 365

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 210/367 (57%), Positives = 271/367 (73%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MI TPYYLIDK KL+ N+ T  ++R  +GVK+LLALKCFA W +FD ++QYMDGTTSSSL
Sbjct: 1   MIGTPYYLIDKSKLIKNMKTIAHLRAISGVKVLLALKCFATWSLFDVMSQYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           YE+ LG EKFG ETHAY+VA+ D EID      D IIFN++ QL +F +       + GL
Sbjct: 61  YELRLGKEKFGKETHAYSVAWADDEIDEACGYADKIIFNSIQQLKRFAN--TTKTIQRGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP +S S F LA+P+RPFSRLGE  +D I+  +  +NGLM HNNCEN  F  F+ ML 
Sbjct: 119 RLNPGISASNFDLANPSRPFSRLGETNQDAIKEVLPLINGLMIHNNCENSDFNLFNQMLN 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
           +IE++F      I+WISLGGGIHFT ++YP++D  +RLK FS+ Y V ++LEPGEA +T 
Sbjct: 179 HIEEKFKELFVAIDWISLGGGIHFTAENYPLEDLAKRLKHFSQTYGVTVFLEPGEAAITK 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           +TTL  +VLD   N KNL IVDSS+EAH+ D L+Y+E+A + PN GPY  MVCG+SCLAG
Sbjct: 239 STTLEVSVLDTLYNKKNLAIVDSSIEAHMLDLLIYRENAKLEPNHGPYEIMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFG F F +P+KIGD++SF+D AGY + +KNWFNG+ MP I +K  +GT+   R+FSYN
Sbjct: 299 DIFGTFQFPEPLKIGDKLSFQDAAGYTMVKKNWFNGVAMPAIVIKECNGTLTLQRQFSYN 358

Query: 361 DYYNNLS 367
           DY N+LS
Sbjct: 359 DYKNSLS 365


>gi|313896306|ref|ZP_07829859.1| carboxynorspermidine decarboxylase [Selenomonas sp. oral taxon 137
           str. F0430]
 gi|312975105|gb|EFR40567.1| carboxynorspermidine decarboxylase [Selenomonas sp. oral taxon 137
           str. F0430]
          Length = 380

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 121/369 (32%), Positives = 196/369 (53%), Gaps = 7/369 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP YL+ ++ L +NL+    + +  G K+LLA KCF+ +  +  + +Y+ GTT+S +Y
Sbjct: 15  VPTPSYLVYEELLTHNLEILKGLAERTGAKVLLAQKCFSMYYYYPLIGRYLAGTTASGIY 74

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+ G E H +  AY+  EI A+ + CD I+FN+ SQ  +F   A+      G+R
Sbjct: 75  EARLSQEEMGKENHVFKPAYEAEEITALAAICDHIVFNSFSQWERFGAAARAQGGSCGIR 134

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP  S  +  + DP  P SRLG K  +  E+  + ++GL FH  CE       +  L  
Sbjct: 135 INPERSTQEQAIYDPCAPGSRLGVKIAEFPETLPEGIDGLHFHTLCEQG-ADALAVTLAA 193

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           +E++FG ++  ++W++ GGG H T  DY V    + ++   E Y V +YLEPGEA+  N 
Sbjct: 194 VEEKFGKYLHGLKWLNFGGGHHITRADYDVALLEELIRHVQETYDVAVYLEPGEAVALNA 253

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRSC 297
             L  +VLD+  +   ++   ++   H+PD +       +          +T  + G +C
Sbjct: 254 GYLAASVLDVRADGNVILNTSAA--CHMPDVIEMPYRPPVVGAGEAREKAHTYTLAGPTC 311

Query: 298 LAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF 357
           LAGD  G + F+ P+  GD + F D+A Y + + N FNG+ +P I   +  G  + +R F
Sbjct: 312 LAGDTIGTYSFDAPLAPGDLVVFGDMAIYTMVKNNTFNGMPLPHIVAVDPSGAWETVRSF 371

Query: 358 SYNDYYNNL 366
            Y D+   L
Sbjct: 372 GYEDFKMRL 380


>gi|114777232|ref|ZP_01452243.1| Carboxynorspermidine decarboxylase [Mariprofundus ferrooxydans
           PV-1]
 gi|114552377|gb|EAU54860.1| Carboxynorspermidine decarboxylase [Mariprofundus ferrooxydans
           PV-1]
          Length = 377

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 127/371 (34%), Positives = 209/371 (56%), Gaps = 6/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P Y++++ KL+ NL     +++ +G K++LALK ++ W  FD + QY+ G T+SSLY
Sbjct: 8   VPSPCYVLEEDKLVGNLKLLKRVQEQSGCKIILALKGYSMWSTFDLIKQYLPGCTASSLY 67

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E+ L  EKFGGE H Y+ A++D E D + S    ++FN+V+Q  +F  KA       G+R
Sbjct: 68  ELKLSDEKFGGENHIYSAAFRDDEFDEICSMAGHLVFNSVNQWQRFGAKAVAAGVSCGIR 127

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP ++  +  L +P    SRLG + +    +++  + G+  H  CEN        ++  
Sbjct: 128 VNPGIAEVETDLYNPCFSGSRLGVRPEHLHGADLAGIEGMHAHALCENL-ADSSVTLIDA 186

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            E  F  +I  ++W++ GGG   T KDY      +R++EF  K+ V++YLEPG AI   T
Sbjct: 187 FEARFADYIPALKWVNFGGGHLITHKDYDADKLIRRIREFKAKWDVEVYLEPGGAIGWRT 246

Query: 242 TTLNTTVLDISENIK-NLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296
             L  +VLDI       + I+D S  AH+PD L       +      N  P+T  + G S
Sbjct: 247 GPLIASVLDIVPTDGLPVAILDISATAHMPDVLEMPYRPAVTGSGGANEKPHTYRLGGTS 306

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CLAGD+ G++ F++P++ G R+ FED+  Y + +   FNG+  P I + + + + + +R 
Sbjct: 307 CLAGDVIGDYSFDEPLQAGTRLVFEDMIHYTMVKTTMFNGVRHPDIGIWHSNDSFELVRR 366

Query: 357 FSYNDYYNNLS 367
           F+Y D+ + LS
Sbjct: 367 FTYEDFRDRLS 377


>gi|189424736|ref|YP_001951913.1| carboxynorspermidine decarboxylase [Geobacter lovleyi SZ]
 gi|189420995|gb|ACD95393.1| carboxynorspermidine decarboxylase [Geobacter lovleyi SZ]
          Length = 384

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 129/372 (34%), Positives = 208/372 (55%), Gaps = 8/372 (2%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y++D  +L +NL     +++ +G ++L+ALK F+ W  F  +++ + G  +SS +E
Sbjct: 14  PSPAYVVDLGRLRHNLAILDQVQQRSGARILMALKAFSMWSTFPLISKTLHGVCASSPWE 73

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IGL 120
             LG E+FG E H++  A+K+ ++  +LS  + ++FN+ +QL +F+   +K   +  IGL
Sbjct: 74  ARLGREEFGREVHSFAAAFKESDVVELLSISNHLVFNSFNQLERFRPLWEKEQGRVSIGL 133

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP  S     + DP  P SRLG    +     +  V GL FH  CE   F       +
Sbjct: 134 RVNPEHSEGHTAIYDPCAPTSRLGIPVAEFEGRSLAGVEGLHFHTLCEQL-FEPLERTAR 192

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
             E++FG ++  ++W++LGGG H T + Y +    + +  F  KY V++YLEPGEAI   
Sbjct: 193 AFEEKFGRYLQGMKWLNLGGGHHITREGYDIDGLVELVTYFKNKYGVEVYLEPGEAIAIG 252

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296
           T  L + VLD+  N  ++ I+D S   H+PD L       I         PYT  + G S
Sbjct: 253 TGLLVSEVLDVVHNQMDIAILDVSATCHMPDILEMPYRPDITGGFKAGEKPYTYRLGGPS 312

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-GTIKAIR 355
           CLAGD+ G++ F++P+K GDR+ FED+A Y + +   FNGI+ P +     D G ++ +R
Sbjct: 313 CLAGDVIGDWSFDQPLKAGDRLVFEDMAHYTMVKTTTFNGIHHPHLCTFEPDTGQLQVVR 372

Query: 356 EFSYNDYYNNLS 367
            F Y D+ + LS
Sbjct: 373 SFGYPDFKSKLS 384


>gi|254469619|ref|ZP_05083024.1| carboxynorspermidine decarboxylase [Pseudovibrio sp. JE062]
 gi|211961454|gb|EEA96649.1| carboxynorspermidine decarboxylase [Pseudovibrio sp. JE062]
          Length = 391

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 126/370 (34%), Positives = 203/370 (54%), Gaps = 5/370 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P +++D+  +  NL     +   +G  +L ALK F+ + +   + +Y++GT +S LY
Sbjct: 23  VPSPCFVVDEVAVRRNLSMLKDVADRSGAHVLAALKAFSMFALAPVVREYLEGTCASGLY 82

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHKKIG 119
           E  LG EK+GGE   +   YK  EID ++   D +IFN+ +Q ++F    +A K +  +G
Sbjct: 83  EARLGREKYGGEVATFCAGYKASEIDEIIGYTDHMIFNSPAQKDRFLPNVRAAKHNVDVG 142

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           LR+NP  S  +    DP  P SRLG          +  V+G+  H  CE + F       
Sbjct: 143 LRVNPEHSEGEVEKYDPCAPCSRLGFPVSQLSAEVLTGVDGIHMHTLCEQE-FEPLQRTW 201

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
             ++ +   +  Q++WI+ GGG H T +DY  +     +K+   +  +++YLEPGEA+  
Sbjct: 202 NAVKDKLAPYFGQLKWINFGGGHHITREDYDREALIAFIKDVRAETGLEVYLEPGEAVAL 261

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-YTAMVCGRSCL 298
           +   L   VLD+ +N  +L IVD S   H+PD +       +   +   +T  + G SCL
Sbjct: 262 DAGILIGEVLDLPKNGMDLAIVDISATCHMPDVIEAPYRPAMLDESEEGHTYRLGGPSCL 321

Query: 299 AGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTIKAIREF 357
           AGD+ G++   +P++IGDR +F D A Y++ + N FNG+ +PTIA+ N     +K IREF
Sbjct: 322 AGDVIGDYTRAEPLQIGDRFAFLDQAHYSMVKTNTFNGVPLPTIALWNSESDELKIIREF 381

Query: 358 SYNDYYNNLS 367
           SYND+ N LS
Sbjct: 382 SYNDFLNRLS 391


>gi|116749354|ref|YP_846041.1| carboxynorspermidine decarboxylase [Syntrophobacter fumaroxidans
           MPOB]
 gi|116698418|gb|ABK17606.1| carboxynorspermidine decarboxylase [Syntrophobacter fumaroxidans
           MPOB]
          Length = 378

 Score =  273 bits (697), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 137/372 (36%), Positives = 215/372 (57%), Gaps = 7/372 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TP Y++D+  L  NL     +R+  G ++L+ALK FA + +F  + + + G  +SS  
Sbjct: 8   IETPCYVVDEAALDRNLAVLDTVRQRTGCRILMALKGFAMFSLFPQIREVLAGVAASSPD 67

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKIG 119
           E  LG E+F GE HAY  AY++ E+  +L  CD ++FN+ SQ N+FK +        + G
Sbjct: 68  EARLGFEEFRGEVHAYAPAYRESELTELLEYCDHLVFNSFSQWNRFKSRVFDHPAPVRCG 127

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +R+NP  S     + DP   FSRLG       E ++  ++GL FH  CE          L
Sbjct: 128 IRVNPEHSEVSVPIYDPCARFSRLGVPRSAFREEDLDGISGLHFHTLCE-LDADSLERTL 186

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
              E  FG F+ ++EW++ GGG H T  DY V   C+ + +F  ++ ++IYLEPGEA+  
Sbjct: 187 AAFETRFGAFLERMEWVNFGGGHHITRPDYDVDLLCRLIDDFRSRHPLEIYLEPGEAVAL 246

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGR 295
           NT  L  +VLD+  N  ++ I+D+S  AH+PD L       I     P   P+T  + G 
Sbjct: 247 NTGILGASVLDLIHNEMDIAILDTSAAAHMPDVLEMPYRPEIDGAGMPGEYPHTYRLGGL 306

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           +CLAGD+ G++ F +P++IG +++F D+A Y + + N FNG+ +P+IA+++  G ++ +R
Sbjct: 307 TCLAGDVIGDYSFPEPLRIGSKLAFLDMAHYTMVKNNTFNGVRLPSIAIRDRRGNVRVVR 366

Query: 356 EFSYNDYYNNLS 367
           +F Y DY N LS
Sbjct: 367 KFGYEDYRNRLS 378


>gi|94265115|ref|ZP_01288880.1| Carboxynorspermidine decarboxylase [delta proteobacterium MLMS-1]
 gi|93454402|gb|EAT04700.1| Carboxynorspermidine decarboxylase [delta proteobacterium MLMS-1]
          Length = 380

 Score =  273 bits (697), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 134/373 (35%), Positives = 203/373 (54%), Gaps = 8/373 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P Y+ D  +L  NL+    +++  G +++LA K FA W +F  +++ + G ++SSL 
Sbjct: 9   VPSPCYVCDSGRLAANLEKLDLVQRRTGARIILAFKGFAMWRLFPQISRVLPGASASSLD 68

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIG 119
           E  L  E+FGGE H Y  AY+D E   +L   D ++FN+ +Q  +FK    A       G
Sbjct: 69  EARLAREEFGGEVHVYCPAYRDDEFAEMLGYADHLVFNSFNQWQRFKPLVAADSRPHSCG 128

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +R+NP  S     L +P  P SRLG          +  ++GL FH  CE       +  L
Sbjct: 129 IRVNPQYSEVAVDLYNPCGPHSRLGVTRAQFRPELLAGLDGLHFHALCEQN-ADALAGTL 187

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
               ++FG F+  ++W+++GGG H T  DY +   C+ + E   +Y V++YLEPGEAI  
Sbjct: 188 AAFHEKFGEFMDGMKWLNMGGGHHITRPDYDIDQLCRLIDEVRTRYHVRVYLEPGEAIAL 247

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGR 295
           +   L  TVLDI +N     I+D+S  AH+PD L       I     P   PYT  + G 
Sbjct: 248 DIGVLVATVLDIVDNEGRSAILDTSAAAHMPDVLEMPYRPEIFGAGEPGQYPYTYRLGGL 307

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTIKAI 354
           SCLAGD+ GE+ F +P++IG R+ F D+A Y + + N FNG+ +P+IA+       ++ +
Sbjct: 308 SCLAGDVIGEYSFPEPLQIGQRLVFGDMAHYTMVKNNTFNGVRLPSIAIYEPATDHLEVV 367

Query: 355 REFSYNDYYNNLS 367
           R F Y DY N LS
Sbjct: 368 RRFGYEDYRNRLS 380


>gi|154506605|ref|ZP_02043062.1| hypothetical protein RUMGNA_03872 [Ruminococcus gnavus ATCC 29149]
 gi|153793358|gb|EDN75780.1| hypothetical protein RUMGNA_03872 [Ruminococcus gnavus ATCC 29149]
          Length = 372

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 132/370 (35%), Positives = 208/370 (56%), Gaps = 8/370 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TP Y+I + ++  NL     IR+ +G K+LLA K F+ +  +  + +Y+DGTT+S LY
Sbjct: 6   LRTPCYVIMESEMKKNLQILQEIRQQSGCKILLAQKAFSMYSCYPLIGEYLDGTTASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LG E  G E H ++ AY++ E + VL +C+ ++FN+ SQL  F ++A K  K +G+R
Sbjct: 66  EAKLGKECMGKENHIFSPAYREDEFEEVLESCEHLVFNSFSQLECFGERAAKAGKSVGIR 125

Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +NP  S      + DP  P SRLG    +  E+    V GL FH  CE          LK
Sbjct: 126 VNPECSTQGEHAIYDPCAPGSRLGILVSEFPETLPSYVEGLHFHTLCEQN-ADALEITLK 184

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++FG ++ Q++W++ GGG H T  DY  +     ++   + Y+VQ+YLEPGEA+  N
Sbjct: 185 AVEEKFGKWMKQLKWVNFGGGHHITRADYDRELLISCVRRIQDTYNVQVYLEPGEAVALN 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296
              L TTV DI  N   ++  D S   H+PD +       ++         YT ++ G +
Sbjct: 245 AGHLITTVEDIVHNDIAVL--DVSAACHMPDVIEMPYRPPLFDSGEAKEKEYTYLLGGPT 302

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CLAGD+ G + F++P+K+GDR++F D+A Y   + N FNG+ +P I  +   G  + ++ 
Sbjct: 303 CLAGDVIGSYSFDQPLKVGDRLTFGDMAIYTTVKNNTFNGMRLPDIVWERESGECEIVKS 362

Query: 357 FSYNDYYNNL 366
           F Y D+   L
Sbjct: 363 FGYEDFKCRL 372


>gi|15890809|ref|NP_356481.1| carboxynorspermidine decarboxylase [Agrobacterium tumefaciens str.
           C58]
 gi|15159095|gb|AAK89266.1| carboxynorspermidine decarboxylase [Agrobacterium tumefaciens str.
           C58]
          Length = 365

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 220/367 (59%), Positives = 278/367 (75%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           M++TPYYLIDK KLL N++   Y+R+ +G K LLALKCFA W +FD ++QYMDGTTSSSL
Sbjct: 1   MLQTPYYLIDKTKLLRNMEKIAYVREKSGAKALLALKCFATWSVFDFMSQYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           YEV LG EKFGGETHAY+VAY D EID V++N D IIFN++ QL +F DKA  +    GL
Sbjct: 61  YEVRLGREKFGGETHAYSVAYADYEIDDVIANADKIIFNSIGQLERFADKASGIT--RGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP VS S F LADP RPFSRLGE    K++  +  ++G M HNNCEN  F  F  ML 
Sbjct: 119 RLNPQVSSSSFDLADPARPFSRLGEWDVAKVDKIMDRISGFMIHNNCENGDFSLFDRMLT 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            IE++FG  +++ EW+SLGGGIHFT  DYP+  FC RL+ FSEKY VQ+YLEPGEA +T 
Sbjct: 179 QIEEKFGSLLSRAEWVSLGGGIHFTGDDYPLDQFCDRLRAFSEKYGVQVYLEPGEASITK 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           +TTL  TVLD   N KNL IVDSS+EAH+ D L+Y+E+A + PN G +  MVCG+SCLAG
Sbjct: 239 STTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIYRETAKVSPNEGEHPYMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFG+F F+K +K+GDRISF+D AGY + +KNWFNG+ MP IA+K +DGT++A+REF + 
Sbjct: 299 DIFGDFRFDKELKVGDRISFQDAAGYTMVKKNWFNGVKMPAIAIKELDGTVRAVREFDFA 358

Query: 361 DYYNNLS 367
           D+  +LS
Sbjct: 359 DFEQSLS 365


>gi|256830088|ref|YP_003158816.1| carboxynorspermidine decarboxylase [Desulfomicrobium baculatum DSM
           4028]
 gi|256579264|gb|ACU90400.1| carboxynorspermidine decarboxylase [Desulfomicrobium baculatum DSM
           4028]
          Length = 389

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 147/377 (38%), Positives = 217/377 (57%), Gaps = 12/377 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP ++ID   L  NLD    +++  G K+LLALK FA W +F  L Q +DG  +SS +
Sbjct: 14  VATPSFVIDLGLLRRNLDVLAEVKERTGCKILLALKGFAMWSLFPVLRQVLDGVCASSPH 73

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK------LH 115
           E  LG E+F  E HA+   Y   +I  + +  D I+FN+  QL KF+             
Sbjct: 74  EARLGREEFKREVHAFAAGYSQADIFDLCTTADHIVFNSFGQLEKFRGLIATEAGRLGRE 133

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175
            ++G+RINP  S     + DP  P SRLG + KD     ++ V GL +HN CE  S  C 
Sbjct: 134 IELGVRINPEHSEGAVPIYDPCSPGSRLGIRRKDFRPDLLEGVTGLHWHNLCEQNS-DCL 192

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
              +   EK FG F +++++++ GGG H T  DY V   C+ + EF  ++ VQ+YLEPGE
Sbjct: 193 ERTIAAAEKGFGEFFSRMQYVNFGGGHHITRPDYDVDLLCRLISEFKARHGVQVYLEPGE 252

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAM 291
           A+  NT  L +TVLD+++    +VI+D+SV AH+PD L       I     P    +T  
Sbjct: 253 AVALNTGYLVSTVLDVTQADMPIVILDTSVPAHMPDVLEMPYRPHIVDSGLPGEKSWTCR 312

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGT 350
           + G+SCLAGD+ GE+ F+KP+  GDR+ F D+A Y++ + N FNGI +P+IA+    D +
Sbjct: 313 LGGQSCLAGDVAGEYSFDKPLVPGDRLVFTDMAHYSMVKTNTFNGIQLPSIAIFEPEDDS 372

Query: 351 IKAIREFSYNDYYNNLS 367
           ++ +R+F Y D+ N LS
Sbjct: 373 MRVVRKFGYEDFKNRLS 389


>gi|229591022|ref|YP_002873141.1| carboxynorspermidine decarboxylase [Pseudomonas fluorescens SBW25]
 gi|229362888|emb|CAY49798.1| carboxynorspermidine decarboxylase [Pseudomonas fluorescens SBW25]
          Length = 365

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 217/367 (59%), Positives = 278/367 (75%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MIKTPYYLIDKQKLL N+    Y+R+ +G K LLALKCFA W +FD + QYMDGTTSSSL
Sbjct: 1   MIKTPYYLIDKQKLLVNMQKIAYVREQSGAKALLALKCFATWSVFDLMQQYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           YE+ LG +KF GE HAY+VA+ D EI+ +L NCD IIFN++SQL +F ++++      GL
Sbjct: 61  YELKLGRQKFEGEAHAYSVAWADDEIEEMLDNCDKIIFNSISQLQRFAERSEGKT--RGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP VS S ++LADP RPFSRLGE    KIE  I+ ++G MFHNNCEN  F  F  ML 
Sbjct: 119 RVNPQVSSSDYLLADPARPFSRLGEWDPVKIEGVIEQISGFMFHNNCENGDFSLFDNMLG 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            IE+ FG  + ++EW+SLGGGIHFT +DY V  FC RLK FSEKY VQ+YLEPGEA +TN
Sbjct: 179 TIEERFGALLHKVEWVSLGGGIHFTGEDYAVDAFCARLKAFSEKYGVQVYLEPGEAAITN 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           + +L  TVLD   N KNL +VDSS+EAH+ D L+Y+ +A + P+ G +T MVCG+SCLAG
Sbjct: 239 SASLEVTVLDTLYNGKNLAVVDSSIEAHLLDLLIYRLNAKLAPSDGEHTVMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGE+ F++P+ IGDR+SF D AGY + +KNWFNG+ MP+I VK +DGT++ +REF Y+
Sbjct: 299 DIFGEYQFDRPLAIGDRLSFIDTAGYTMVKKNWFNGLKMPSIVVKQLDGTVEVVREFGYD 358

Query: 361 DYYNNLS 367
           DY ++LS
Sbjct: 359 DYLSSLS 365


>gi|94265973|ref|ZP_01289697.1| Carboxynorspermidine decarboxylase [delta proteobacterium MLMS-1]
 gi|93453476|gb|EAT03889.1| Carboxynorspermidine decarboxylase [delta proteobacterium MLMS-1]
          Length = 380

 Score =  272 bits (696), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 135/373 (36%), Positives = 202/373 (54%), Gaps = 8/373 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P Y+ D  +L  NL+    +++  G +++LA K FA W +F  +++ + G ++SSL 
Sbjct: 9   VPSPCYVCDSGRLAANLEKLDLVQRRTGARIILAFKGFAMWRLFPQISRVLPGASASSLD 68

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIG 119
           E  L  E+FGGE H Y  AY+D E   +L   D ++FN+  Q  +FK    A       G
Sbjct: 69  EARLAREEFGGEVHVYCPAYRDDEFAEMLGYADHLVFNSCHQWQRFKPLVAADSRPHSCG 128

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +R+NP  S     L +P  P SRLG          +  ++GL FH  CE       +  L
Sbjct: 129 IRVNPQYSEVAVDLYNPCGPHSRLGVTRAQFRPELLAGLDGLHFHALCEQN-ADALAGTL 187

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
               ++FG F+  ++W+++GGG H T  DY +   C+ + E   +Y VQ+YLEPGEAI  
Sbjct: 188 AAFHEKFGEFMDGMKWLNMGGGHHITRPDYDIDQLCRLIDEVRTRYHVQVYLEPGEAIAL 247

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGR 295
           +   L  TVLDI +N     I+D+S  AH+PD L       I     P   PYT  + G 
Sbjct: 248 DIGVLVATVLDIVDNEGRSAILDTSAAAHMPDVLEMPYRPEIFGAGEPGQYPYTYRLGGL 307

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTIKAI 354
           SCLAGD+ GE+ F +P++IG R+ F D+A Y + + N FNG+ +P+IA+       ++ +
Sbjct: 308 SCLAGDVIGEYSFPEPLQIGQRLVFGDMAHYTMVKNNTFNGVRLPSIAIYEPATDHLEVV 367

Query: 355 REFSYNDYYNNLS 367
           R F Y DY N LS
Sbjct: 368 RRFGYEDYRNRLS 380


>gi|152991040|ref|YP_001356762.1| carboxynorspermidine decarboxylase [Nitratiruptor sp. SB155-2]
 gi|151422901|dbj|BAF70405.1| carboxynorspermidine decarboxylase [Nitratiruptor sp. SB155-2]
          Length = 382

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 139/372 (37%), Positives = 213/372 (57%), Gaps = 9/372 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y+ ++  L  NL+    +++ +G K++LALK FA W  FD L QY+ G T+S L+
Sbjct: 14  IPTPCYVCEEGLLRRNLEILDEVQQKSGAKIILALKGFAMWSTFDILKQYLHGATASGLW 73

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ--KLHKKIG 119
           E  L  E+ G E H Y+ A+K+ EI+ +    D I+FN++ Q N FKD  +       IG
Sbjct: 74  EAKLAFEELGKEVHTYSPAFKEDEIELIAKMSDHIVFNSMHQFNAFKDIVKKTDPDISIG 133

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +R+NP  S +   L +P   FSRLG    +   S    + GL FH  CE +S      +L
Sbjct: 134 VRVNPEYSAAPVDLYNPCGAFSRLGVVRSEF--SWDDAIKGLHFHALCE-ESAESLEGVL 190

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
           K  E+ FG F+ + +WI+ GGG H T + Y  +   + +++F ++Y V++YLEPGEA+  
Sbjct: 191 KAFEERFGEFVPKCKWINFGGGHHITKEGYNRELLIKLIRDFKKRYDVEVYLEPGEAVGW 250

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGR 295
            T  L  TV+DI  N  ++ I+D+S E H+PD L       +     P   PYT  + G 
Sbjct: 251 QTGVLVATVVDIVHNGMDIAILDTSAETHMPDVLAMPYRPDVRGAAKPGEKPYTYRLGGN 310

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           SCLAGDI G++ F++P++ G ++ FED+  Y   +   FNGI +P++A+   DG  + ++
Sbjct: 311 SCLAGDIIGDYSFDEPLQRGQKLVFEDMIHYTFVKNTTFNGIRLPSLALLKEDGKFEIVK 370

Query: 356 EFSYNDYYNNLS 367
           +F Y DY + LS
Sbjct: 371 KFDYCDYKHRLS 382


>gi|167033842|ref|YP_001669073.1| carboxynorspermidine decarboxylase [Pseudomonas putida GB-1]
 gi|166860330|gb|ABY98737.1| carboxynorspermidine decarboxylase [Pseudomonas putida GB-1]
          Length = 365

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 213/367 (58%), Positives = 279/367 (76%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MIKTPYYLIDK KLL+N++   Y+R+++G K LLALKCFA W +FD + QYMDGTTSSSL
Sbjct: 1   MIKTPYYLIDKTKLLSNMEKIAYVREHSGAKALLALKCFATWSVFDLMQQYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           +E+ LG +KF GETHAY+VA+ D E++ +L NCD IIFN++ QL +F +  Q   K  GL
Sbjct: 61  FELKLGRQKFAGETHAYSVAWADDEVEEMLENCDKIIFNSIGQLQRFAE--QSEGKVRGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP VS S ++LADP RPFSRLGE    KIE  I+ ++G MFHNNCEN  F  F  ML 
Sbjct: 119 RVNPQVSSSDYLLADPARPFSRLGEWDPAKIEQVIEQISGFMFHNNCENGDFGLFDKMLT 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
           +IE+ FGH + ++EW+SLGGGIHFT +DY V  FC RLK FS+ Y VQ+YLEPGEA +TN
Sbjct: 179 HIEERFGHLLHKVEWVSLGGGIHFTGEDYAVDAFCARLKAFSQTYGVQVYLEPGEAAITN 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           + +L  TVLD   N K+L +VDSS+EAH+ D L+Y+ +A + PN G +T MVCG+SCLAG
Sbjct: 239 SASLEVTVLDTLYNGKHLAVVDSSIEAHLLDLLIYRLNAKMAPNDGEHTYMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGE+ F++P+ IGDR+SF D AGY + +KNWFNG+ MP+I VK +DG+++ +REF + 
Sbjct: 299 DIFGEYQFDRPLTIGDRLSFIDTAGYTMVKKNWFNGLKMPSIVVKQLDGSVEVVREFGFE 358

Query: 361 DYYNNLS 367
           DY ++LS
Sbjct: 359 DYVSSLS 365


>gi|304436965|ref|ZP_07396928.1| carboxynorspermidine decarboxylase [Selenomonas sp. oral taxon 149
           str. 67H29BP]
 gi|304369916|gb|EFM23578.1| carboxynorspermidine decarboxylase [Selenomonas sp. oral taxon 149
           str. 67H29BP]
          Length = 378

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 124/369 (33%), Positives = 194/369 (52%), Gaps = 7/369 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP YL+ ++ L  NL     + ++ G  +LLA KCF+ +  +  + +Y+ GTT+S +Y
Sbjct: 13  VPTPSYLVYEELLEKNLKVLAEVAEDTGATILLAQKCFSMYHYYPLIGRYLAGTTASGIY 72

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+ G E H +  AY+D EI+ + S CD IIFN+ SQ  +F   A+      G+R
Sbjct: 73  EARLSQEEMGKENHVFKPAYEDEEIEQLASICDHIIFNSFSQWERFGTVARLHGASCGMR 132

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP  S     + DP  P SRLG K  D  E  +  ++GL FH  CE          L  
Sbjct: 133 INPECSTQDHAIYDPCAPGSRLGVKTADFREEILAGLDGLHFHTLCEQG-ADALEETLDA 191

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           +E++FG ++  ++W++ GGG H T   Y +    + ++   EKY V +YLEPGEA+  N 
Sbjct: 192 VEEKFGKYLHGMKWLNFGGGHHITRVGYDISLLKKLIRRVQEKYHVAVYLEPGEAVALNA 251

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRSC 297
             L + VLD+      ++   ++   H+PD +       +          +T  + G +C
Sbjct: 252 GFLVSEVLDVQAGGNVILNTSAA--CHMPDVIEMPYRPPVVGAGEAGEKAHTYTLAGPTC 309

Query: 298 LAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF 357
           LAGD  G + F+ P+ IGDR+ F D+A Y + + N FNG+ +P I   +  G  + +R F
Sbjct: 310 LAGDTIGTYSFDTPLCIGDRVVFGDMAIYTMVKNNTFNGMPLPYIIAVSPQGEWETVRTF 369

Query: 358 SYNDYYNNL 366
            Y+D+   L
Sbjct: 370 GYDDFKMRL 378


>gi|254492579|ref|ZP_05105751.1| carboxynorspermidine decarboxylase [Methylophaga thiooxidans
           DMS010]
 gi|224462471|gb|EEF78748.1| carboxynorspermidine decarboxylase [Methylophaga thiooxydans
           DMS010]
          Length = 388

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 129/376 (34%), Positives = 209/376 (55%), Gaps = 11/376 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P +++D+  +  NL     + + +G K+L ALK F+ W   +  +QY+ GT +S L+
Sbjct: 14  LPSPCFVVDEVAVERNLRILSDVAEASGAKILGALKAFSMWSFGNMTHQYLSGTCASGLH 73

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-----QKLHK 116
           E  LGHE++GGE H +  A+   +ID +L+    I+FN+  Q  +F+++      Q+   
Sbjct: 74  EAKLGHEEYGGEVHVFAAAFSQADIDELLTFAHHIVFNSCGQWLRFREQCLAAKKQRPEL 133

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
           + GLRINP  S     + DP  P SRLG       ES +  + GL FH  CE   F   S
Sbjct: 134 QFGLRINPEHSEGTVPIYDPCAPGSRLGITLSQLDESVLDGITGLHFHTLCEQG-FEPLS 192

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
             +  +EK FGH ++Q++W++ GGG H T   Y +    + ++ F ++++V++Y+EPGEA
Sbjct: 193 RTVAAVEKNFGHLLSQMDWVNFGGGHHITADGYNINGLVEMVQVFRQRHNVEVYMEPGEA 252

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----YTAMV 292
           +   T  L+  VLDI+ N  N  I+D+S   H+PD L       I          +T  +
Sbjct: 253 MAIGTGVLSCEVLDITWNQINQAILDTSATCHMPDTLEMPYRPDITGAAEAEKLSHTYRL 312

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-GTI 351
            G +CLAGD+ G++ F KP++IG R+ FED+  Y + +   FNG  +P IA+ N +   +
Sbjct: 313 GGLTCLAGDVIGDYSFAKPLEIGQRLVFEDMGHYTMVKTTTFNGTKLPAIAIWNSETDAL 372

Query: 352 KAIREFSYNDYYNNLS 367
             ++EF Y D+ + LS
Sbjct: 373 CVVKEFGYADFKHRLS 388


>gi|319943411|ref|ZP_08017693.1| carboxynorspermidine decarboxylase [Lautropia mirabilis ATCC 51599]
 gi|319743226|gb|EFV95631.1| carboxynorspermidine decarboxylase [Lautropia mirabilis ATCC 51599]
          Length = 366

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 183/366 (50%), Positives = 247/366 (67%), Gaps = 2/366 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP YLID+ +L  NL+T   +R+ +G K LLALKCFA W +F  + +Y+DGTTSSSL 
Sbjct: 3   LPTPCYLIDETRLRTNLETIARLRERSGAKALLALKCFAGWSVFPLMREYLDGTTSSSLN 62

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LGHEKFGGETH Y+VA+   E+       D +IFN++SQL +  +        +GLR
Sbjct: 63  EVRLGHEKFGGETHGYSVAWAPGEVTEAARLADKLIFNSISQLKRLSNLCG--KTPLGLR 120

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP VS S ++LADP RP SRLGE    +IE     ++G+M HNNCEN+S   FS ML  
Sbjct: 121 LNPGVSNSPYLLADPARPNSRLGESDPARIEQVADLISGVMIHNNCENRSLEQFSGMLDR 180

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           IE+ FG  + ++ W+SLGGGIH+T   YP++    RL+ F+++  VQ+YLEPGEA VT  
Sbjct: 181 IERTFGPLLKRLSWVSLGGGIHYTAPGYPLEALADRLRAFADRMQVQVYLEPGEAAVTGA 240

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGD 301
            TL  TVLD+ E  K + I+D+S+EAH+ D L Y+  A + P+ GP+   + G +CLAGD
Sbjct: 241 ATLEVTVLDVLERAKPIAIIDASIEAHMLDLLTYELPARVLPDEGPWRCQLAGNTCLAGD 300

Query: 302 IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361
           IFGEF F  P++ GDRIS +D AGY + +KNWFNG+ MP IAV+ +DG I+  R F Y D
Sbjct: 301 IFGEFSFPHPLRPGDRISLQDAAGYTMVKKNWFNGVPMPAIAVRRLDGRIEMQRRFGYED 360

Query: 362 YYNNLS 367
           Y ++LS
Sbjct: 361 YRDSLS 366


>gi|308068410|ref|YP_003870015.1| carboxynorspermidine decarboxylase [Paenibacillus polymyxa E681]
 gi|305857689|gb|ADM69477.1| carboxynorspermidine decarboxylase [Paenibacillus polymyxa E681]
          Length = 379

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 142/373 (38%), Positives = 217/373 (58%), Gaps = 8/373 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P YL+D++ L+ NL+    +++  G  +LLALK F+ +  F  + +Y+ G TSSSL+
Sbjct: 8   LPSPCYLVDERLLVKNLEVLNSVQERTGCSILLALKGFSMFSTFPLVGKYLKGVTSSSLF 67

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ---KLHKKI 118
           E  LG EK   E H Y  AY D E D +L   D I+FN+  QL ++K + Q        I
Sbjct: 68  EARLGREKMDKEVHVYAPAYVDSEFDELLEYVDHIVFNSFDQLKRYKSRVQGVTSKKIDI 127

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
           G+R+NP  S  +  L DP    SR+G    +    ++  V+G+ FH  CE  S       
Sbjct: 128 GIRVNPEYSEIETPLYDPCYNNSRMGVTLANFRPEDLDGVDGIHFHTMCEQNS-DTLERT 186

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
           +K ++++FG +I  ++W++ GGG H T +DY +    + ++ F +KY VQ+YLEPGEAI 
Sbjct: 187 IKVVDEKFGPYIKNMKWLNFGGGHHITREDYDLDTLVRCIQYFQDKYGVQVYLEPGEAIA 246

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----YTAMVCG 294
            NT  L  TVLD  +N  ++ I+D+S E H+PD L       I     P    YT  + G
Sbjct: 247 LNTGYLVATVLDTMKNGMDIAILDTSAECHMPDVLAMPYRPNIIDAGKPGEYAYTYRLGG 306

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            +CLAGD+ G++ F++P+K GD++ F D+A Y + + + FNG+N+P IA  N +  IK I
Sbjct: 307 LTCLAGDVIGDYSFKEPLKPGDKLVFCDMAHYTMVKNHMFNGVNLPAIASYNDEEGIKVI 366

Query: 355 REFSYNDYYNNLS 367
           R+FSY D+ + LS
Sbjct: 367 RQFSYEDFSSRLS 379


>gi|94271917|ref|ZP_01292037.1| Carboxynorspermidine decarboxylase [delta proteobacterium MLMS-1]
 gi|93450300|gb|EAT01549.1| Carboxynorspermidine decarboxylase [delta proteobacterium MLMS-1]
          Length = 380

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 135/373 (36%), Positives = 202/373 (54%), Gaps = 8/373 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P Y+ D  +L  NL+    +++  G +++LA K FA W +F  +++ + G ++SSL 
Sbjct: 9   VPSPCYVCDSGRLAANLEKLDLVQRRTGARIILAFKGFAMWRLFPQISRVLPGASASSLD 68

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIG 119
           E  L  E+FGGE H Y  AY+D E   +L   D ++FN+  Q  +FK    A       G
Sbjct: 69  EARLAREEFGGEVHVYCPAYRDDEFAEMLGYADHLVFNSCHQWQRFKPLVAADSRPHSCG 128

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +R+NP  S     L +P  P SRLG          +  ++GL FH  CE       +  L
Sbjct: 129 IRVNPQYSEVAVDLYNPCGPHSRLGVTRAQFRPELLAGLDGLHFHALCEQN-ADALAGTL 187

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
               ++FG F+  ++W+++GGG H T  DY +   C+ + E   +Y VQ+YLEPGEAI  
Sbjct: 188 AAFHEKFGEFMDGMKWLNMGGGHHITRPDYDIDQLCRLIDEVRTRYHVQVYLEPGEAIAL 247

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGR 295
           +   L  TVLDI +N     I+D+S  AH+PD L       I     P   PYT  + G 
Sbjct: 248 DIGVLVATVLDIVDNEGRSAILDTSAAAHMPDVLEMPYRPEIFGAGEPGQYPYTYRLGGL 307

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTIKAI 354
           SCLAGD+ GE+ F +P++IG R+ F D+A Y + + N FNG+ +P+IA+       ++ +
Sbjct: 308 SCLAGDVIGEYSFPEPLQIGQRLLFGDMAHYTMVKNNTFNGVRLPSIAIYEPATDHLEVV 367

Query: 355 REFSYNDYYNNLS 367
           R F Y DY N LS
Sbjct: 368 RRFGYEDYRNRLS 380


>gi|89067260|ref|ZP_01154773.1| hypothetical protein OG2516_10486 [Oceanicola granulosus HTCC2516]
 gi|89046829|gb|EAR52883.1| hypothetical protein OG2516_10486 [Oceanicola granulosus HTCC2516]
          Length = 365

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 207/367 (56%), Positives = 271/367 (73%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           M++TPYYLIDKQ LL NL+    +R+ +G K LLALKCFAAW +FD +++YMDGTTSSS 
Sbjct: 1   MLRTPYYLIDKQALLPNLEKIARLRELSGCKCLLALKCFAAWSVFDLMSEYMDGTTSSSP 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           +EV LG + F GETHAY+VA+ + ++  VL+N D IIFNT+ QL +F + A       GL
Sbjct: 61  FEVKLGRKHFPGETHAYSVAWDEADLLEVLANSDKIIFNTIGQLERFGEAA--SDHVRGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP +S S F +ADP RPFSRLGE   ++I +    V+G MFHNNCEN  F  F AML 
Sbjct: 119 RVNPGISSSSFDIADPARPFSRLGEHDPERIGAVCDRVSGFMFHNNCENDDFDRFDAMLT 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            IE+ FGH I+++EW+SLGGGIHFT + YP++   +RL+ FSE Y VQ+YLEPGEA +T+
Sbjct: 179 QIEERFGHLISRMEWVSLGGGIHFTGEGYPLEKLAERLRRFSETYGVQVYLEPGEAAITD 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           +TTL  TVLD  +N K L +VDSS+EAH+ D L+Y+E A + P+TG +  MVCG SCLAG
Sbjct: 239 STTLELTVLDTLDNGKKLAVVDSSIEAHMLDLLIYREQAKVAPDTGDHEWMVCGNSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGEF FE+P+K GDR+S  D  GY + +KNWFNG+ MP IAV+ +DGT++ +REFSY+
Sbjct: 299 DIFGEFRFERPLKPGDRVSIRDAGGYTMVKKNWFNGVRMPAIAVRELDGTVRTVREFSYS 358

Query: 361 DYYNNLS 367
           D+   LS
Sbjct: 359 DFEAALS 365


>gi|240851382|ref|YP_002972785.1| carboxynorspermidine decarboxylase [Bartonella grahamii as4aup]
 gi|240268505|gb|ACS52093.1| carboxynorspermidine decarboxylase [Bartonella grahamii as4aup]
          Length = 365

 Score =  272 bits (694), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 206/367 (56%), Positives = 273/367 (74%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MIKTPYYLIDK KL+ N+ T   +R+ +G K+LLALKCFA W +FD ++++MDGTTSSSL
Sbjct: 1   MIKTPYYLIDKSKLIKNMQTISRLREMSGAKILLALKCFATWSVFDLMSEFMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           YE+ LG EKFG ETHAY+VA+ D EID   S  D IIFN++ QL +F + +     + GL
Sbjct: 61  YELRLGREKFGKETHAYSVAWADHEIDEACSYADKIIFNSIQQLQRFSNAS--KTIQRGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP +S S F LA+P+RPFSRLGE  +  I+  +  +NGLM HNNCEN  F  F+ ML 
Sbjct: 119 RLNPGISASNFDLANPSRPFSRLGETNQSAIKEVLPLINGLMIHNNCENADFNLFNQMLN 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
           ++E++F      ++WISLGGGIHFT ++YP++ F +RLK+FS+ + V ++LEPGEA +T 
Sbjct: 179 HMEEKFAELFAAVDWISLGGGIHFTAENYPLESFAKRLKQFSKTHGVTLFLEPGEAAITK 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           +TTL  +VLD   N KNL IVDSS+EAH+ D L+Y+E+A + PN GPY  M+CG+SCLAG
Sbjct: 239 STTLEVSVLDTLYNEKNLAIVDSSIEAHMLDLLIYRENAKLEPNQGPYEIMICGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFG F F+KP+KIGDR+SF+D AGY + +KNWFNG+ MP I +K  DGT+   R+FSYN
Sbjct: 299 DIFGTFQFQKPLKIGDRLSFQDAAGYTMVKKNWFNGVTMPAIVLKECDGTLTLQRQFSYN 358

Query: 361 DYYNNLS 367
           DY  +LS
Sbjct: 359 DYQESLS 365


>gi|327481962|gb|AEA85272.1| carboxynorspermidine decarboxylase [Pseudomonas stutzeri DSM 4166]
          Length = 365

 Score =  272 bits (694), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 214/367 (58%), Positives = 277/367 (75%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MIKTPYYLIDKQKLL NL+   Y+R+ +G K LLALKCFA W +FD + QYMDGTTSSSL
Sbjct: 1   MIKTPYYLIDKQKLLGNLEKIAYVREQSGAKALLALKCFATWSVFDLMQQYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           YE+ LG +KF GETHAY+VA+ D EI+ +++NCD IIFN++ QL +F +         GL
Sbjct: 61  YELKLGRQKFAGETHAYSVAWADDEIEEMVANCDKIIFNSIGQLERFAEA--TEGTIRGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP VS S ++LADP RPFSRLGE    KIE  +  ++G MFHNNCEN SF  F  ML 
Sbjct: 119 RVNPQVSSSDYLLADPARPFSRLGEWDPAKIEKVMGQISGFMFHNNCENSSFELFDKMLS 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            IE+ FGH + Q++W+SLGGGIHFT + YP+  FC RLK FSEK+ VQ+YLEPGEA +T 
Sbjct: 179 TIEERFGHLLEQVQWVSLGGGIHFTGEGYPLDAFCARLKAFSEKFGVQVYLEPGEAAITM 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           + +L  TVLD   N KNL +VDSS+EAH+ D L+Y+ +A + PN G ++ MVCG+SCLAG
Sbjct: 239 SASLEVTVLDTLYNGKNLAVVDSSIEAHMLDLLIYRLNAKMAPNDGEHSYMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGE+ F++P+ IGDR+SF D AGY + +KNWFNG+ MP+I VK +DG+++ +REF +N
Sbjct: 299 DIFGEYQFDRPLAIGDRLSFIDAAGYTMVKKNWFNGLKMPSIVVKQLDGSVEVVREFDFN 358

Query: 361 DYYNNLS 367
           DY ++LS
Sbjct: 359 DYLSSLS 365


>gi|188587896|ref|YP_001920344.1| carboxynorspermidine decarboxylase [Clostridium botulinum E3 str.
           Alaska E43]
 gi|188498177|gb|ACD51313.1| carboxynorspermidine decarboxylase [Clostridium botulinum E3 str.
           Alaska E43]
          Length = 380

 Score =  272 bits (694), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 129/372 (34%), Positives = 217/372 (58%), Gaps = 8/372 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P YL+D++ L  NL+   Y+++  G  ++LA K F+ +  F  + +Y+ G TSSSL+
Sbjct: 10  LPSPCYLVDERLLKKNLERLNYVQEETGANIILATKAFSMYSTFPLIGKYLKGVTSSSLF 69

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ---KLHKKI 118
           E  LG+E+ G + H ++ AY+  E D ++  CD I+FN+ +Q   +KD+ +       + 
Sbjct: 70  EARLGYEEMGKQVHIFSPAYRQDEFDEIMKYCDHIVFNSFNQWKLYKDRVKTYSNKKIEC 129

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
           G+RINP  S  +  + +P    SR+G   ++    ++  ++GL FH  CE  S    +  
Sbjct: 130 GIRINPEYSEIETDIYNPCFENSRMGVTLENFKIEDLDGIDGLHFHTMCEQNS-DTLART 188

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
           +K I+ +FG +I  ++WI+ GGG H T +DY ++     +     KY V IYLEPGEA+ 
Sbjct: 189 IKVIDNKFGKYIKNMKWINFGGGHHITREDYDMETLIDVILYIKNKYDVDIYLEPGEAVA 248

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----YTAMVCG 294
            N+  L  TVLD+ +N  N+ IVD+S   H+PD L       I  +  P    YT  +  
Sbjct: 249 LNSGFLICTVLDVIKNGMNIAIVDTSAVCHMPDVLEMPYRPHIINSGMPNQYEYTYRLGA 308

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            +CLAGD+ G++ F++P+K+GD+++F D+A Y++ + N FNGIN+P I   + +  ++ I
Sbjct: 309 PTCLAGDVVGDYSFKEPLKVGDKLAFCDMAIYSMVKNNTFNGINLPAIVKYSDEKGVEII 368

Query: 355 REFSYNDYYNNL 366
           ++F Y D+ + L
Sbjct: 369 KKFGYEDFKSRL 380


>gi|118581021|ref|YP_902271.1| carboxynorspermidine decarboxylase [Pelobacter propionicus DSM
           2379]
 gi|118503731|gb|ABL00214.1| carboxynorspermidine decarboxylase [Pelobacter propionicus DSM
           2379]
          Length = 392

 Score =  272 bits (694), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 129/380 (33%), Positives = 204/380 (53%), Gaps = 16/380 (4%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y++D  +L +NL     ++K +G K+L+ALK F+ W  F  +++ + G  +SS +E
Sbjct: 14  PSPAYVVDLGRLRHNLAILDNVQKRSGAKILMALKAFSMWSTFPLISRTLAGVCASSPWE 73

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK--DKAQKLHKKIGL 120
             LG E+FGGE H++  A+K+ ++  +L   + ++FN++ QL +F+   +A+  +  IGL
Sbjct: 74  ARLGREEFGGEVHSFAAAFKERDVVELLEISNHLVFNSLGQLERFRPLWEAKHGNVSIGL 133

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLMFHNNCENKSF 172
           R+NP  S     + DP  P SRLG    +             +  V GL FH  CE   F
Sbjct: 134 RVNPEHSEGHTAIYDPCAPCSRLGIPLAEFERRIGEVGEERALNGVEGLHFHTLCEQL-F 192

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232
                  +  E++FG F+ +++W++LGGG H T + Y +      +  F EKY + +YLE
Sbjct: 193 QPLERTARAFEEKFGRFLPRMKWLNLGGGHHITREGYDIDGLVDLVSYFREKYDLTVYLE 252

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPY 288
           PGEAI   T  L   VLD+  N  ++ I+D S   H+PD L       I          +
Sbjct: 253 PGEAIAIGTGILVGEVLDLVHNAMDIAILDLSATCHMPDILEMPYRPDIKNGFDPGEKAH 312

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-V 347
           +  + G SCLAGD+ G++ FE+P+  GDR++F D+A Y + +   FNGI  P I      
Sbjct: 313 SYRLAGPSCLAGDVIGDWSFERPLLPGDRLAFLDMAHYTMVKTTTFNGIQHPAICTYEPE 372

Query: 348 DGTIKAIREFSYNDYYNNLS 367
            G +K +R F+Y D+   LS
Sbjct: 373 TGELKVVRTFAYGDFRARLS 392


>gi|163869358|ref|YP_001610614.1| carboxynorspermidine decarboxylase [Bartonella tribocorum CIP
           105476]
 gi|161019061|emb|CAK02619.1| carboxynorspermidine decarboxylase [Bartonella tribocorum CIP
           105476]
          Length = 366

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 205/367 (55%), Positives = 269/367 (73%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MIKTPYYLIDK KL+ N+ T   +R+ +G K+LLALKCFA W +FD ++++MDGTTSSSL
Sbjct: 2   MIKTPYYLIDKSKLIKNMQTISRLREMSGAKVLLALKCFATWSVFDLMSEFMDGTTSSSL 61

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           YE+ LG EKFG ETHAY+VA+ D EID      D IIFN++ QL +F D       + GL
Sbjct: 62  YELRLGKEKFGKETHAYSVAWADHEIDEACDYADKIIFNSIQQLQRFSDA--TKTIQRGL 119

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP +S S F LA+P+RPFSRLGE  +  I+  +  +NGLM HNNCEN  F  F+ ML 
Sbjct: 120 RLNPGISASHFDLANPSRPFSRLGETNQSAIKEVLPLINGLMIHNNCENADFNLFNQMLG 179

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++F    + ++WISLGGGIHFT ++YP++ F +RLK FS+ + V ++LEPGEA +T 
Sbjct: 180 AMEEKFSELFSAVDWISLGGGIHFTAENYPLEAFAERLKHFSKTHGVTLFLEPGEAAITK 239

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           +TTL  +VLD   N KNL IVDSS+EAH+ D L+Y+E+A + PN G +  M+CG+SCLAG
Sbjct: 240 STTLEVSVLDTLYNEKNLAIVDSSIEAHMLDLLIYRENAKLEPNQGEHEIMICGKSCLAG 299

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFG F FEKP+KIGDR+SF+D AGY + +KNWFNG+ MP I +K  DGT+   R+FSYN
Sbjct: 300 DIFGTFQFEKPLKIGDRLSFQDAAGYTMVKKNWFNGVTMPAIVLKECDGTLTLQRQFSYN 359

Query: 361 DYYNNLS 367
           DY  +LS
Sbjct: 360 DYRESLS 366


>gi|312961468|ref|ZP_07775970.1| carboxynorspermidine decarboxylase [Pseudomonas fluorescens WH6]
 gi|311284265|gb|EFQ62844.1| carboxynorspermidine decarboxylase [Pseudomonas fluorescens WH6]
          Length = 365

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 213/367 (58%), Positives = 276/367 (75%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MIKTPYYLIDKQKLL N+    Y+R+ +G K LLALKCFA W +FD + QYMDGTTSSSL
Sbjct: 1   MIKTPYYLIDKQKLLVNMQKIAYVREQSGAKALLALKCFATWSVFDLMQQYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           YE+ LG +KF GE HAY+VA+ D EI+ +L NCD IIFN++SQL +F ++++      GL
Sbjct: 61  YELKLGRQKFEGEAHAYSVAWADDEIEEMLDNCDKIIFNSISQLQRFAERSEGKT--RGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP VS S ++LADP RPFSRLGE    KIE  I+ ++G MFHNNCEN  F  F  ML 
Sbjct: 119 RVNPQVSSSDYLLADPARPFSRLGEWDPVKIEGVIEQISGFMFHNNCENGDFSLFDKMLG 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            IE+ FG  + +++W+SLGGGIHFT + Y +  FC RLK FSEKY VQ+YLEPGEA +TN
Sbjct: 179 TIEERFGALLHKVKWVSLGGGIHFTGEGYALDAFCARLKAFSEKYGVQVYLEPGEAAITN 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           + +L  TVLD   N KNL +VDSS+EAH+   L+Y+ +A + P+ G +T MVCG+SCLAG
Sbjct: 239 SASLEVTVLDTLYNGKNLAVVDSSIEAHLLALLIYRLNAKLAPSEGEHTVMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGE+ F++P+ IGDR+SF D AGY + +KNWFNG+ MP+I VK +DGT++ +REF Y+
Sbjct: 299 DIFGEYQFDRPLAIGDRLSFIDTAGYTMVKKNWFNGLKMPSIVVKQLDGTVEVVREFGYD 358

Query: 361 DYYNNLS 367
           DY ++LS
Sbjct: 359 DYLSSLS 365


>gi|325277688|ref|ZP_08143260.1| carboxynorspermidine decarboxylase [Pseudomonas sp. TJI-51]
 gi|324097183|gb|EGB95457.1| carboxynorspermidine decarboxylase [Pseudomonas sp. TJI-51]
          Length = 365

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 215/367 (58%), Positives = 279/367 (76%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MIKTPYYLIDK KLL+N++   Y+R+++G K LLALKCFA W +FD + QYMDGTTSSSL
Sbjct: 1   MIKTPYYLIDKTKLLSNMEKIAYVREHSGAKALLALKCFATWSVFDLMQQYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           +E+ LG +KF GETHAY+VA+ D E++ +L NCD IIFN++ QL +F D  Q   K  GL
Sbjct: 61  FELKLGRQKFAGETHAYSVAWADDEVEEMLENCDKIIFNSIGQLQRFAD--QSEGKVRGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP VS S ++LADP RPFSRLGE    KIE  I  ++G MFHNNCEN  F  F  ML 
Sbjct: 119 RVNPQVSSSDYLLADPARPFSRLGEWDPAKIEQVIGQISGFMFHNNCENGDFGLFDKMLT 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
           +IE+ FGH + Q+EW+SLGGGIHFT +DY V  FC RLK F++ Y VQ+YLEPGEA +TN
Sbjct: 179 HIEERFGHLLHQVEWVSLGGGIHFTGEDYAVDAFCARLKAFAQTYGVQVYLEPGEAAITN 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           + +L  TVLD   N K+L +VDSS+EAH+ D L+Y+ +A + PN G +T MVCG+SCLAG
Sbjct: 239 SASLEVTVLDTLYNGKHLAVVDSSIEAHLLDLLIYRLNAKMAPNDGEHTYMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGE+ F++P+ IGDR+SF D AGY + +KNWFNG+ MP+IAVK +DG+++ +REF + 
Sbjct: 299 DIFGEYQFDRPLAIGDRLSFVDTAGYTMVKKNWFNGLKMPSIAVKQLDGSVEVVREFGFE 358

Query: 361 DYYNNLS 367
           DY ++LS
Sbjct: 359 DYVSSLS 365


>gi|56695512|ref|YP_165860.1| carboxynorspermidine decarboxylase [Ruegeria pomeroyi DSS-3]
 gi|56677249|gb|AAV93915.1| carboxynorspermidine decarboxylase [Ruegeria pomeroyi DSS-3]
          Length = 392

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 122/368 (33%), Positives = 197/368 (53%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP +++D+  +  NL     I   +G  +L ALK F+ + +   + QY+ GT +S +Y
Sbjct: 26  VPTPCFVVDEVAIERNLKILRDISDRSGAHVLSALKAFSMFTLAPLVRQYLGGTCASGIY 85

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LG E++GGE   +   YK+ +ID +LS  + IIFN+ +Q ++F  +AQ    ++GLR
Sbjct: 86  EARLGREEYGGEVATFCAGYKEQDIDEILSLSNHIIFNSPAQKDRFLSRAQAAGVQVGLR 145

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP  S  +    DP  P SRLG          +K V+GL  H  CE   F         
Sbjct: 146 INPEHSEGEIAKYDPCAPCSRLGTPVSLLTPETLKGVDGLHMHTLCEQG-FEPLLRTWAA 204

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           +E +   ++  ++W++ GGG H T  DY        LK    ++ + +YLEPGEA+  + 
Sbjct: 205 VEPKLAPYLPGLKWLNFGGGHHITRADYDRDALIDFLKSLRARHGLDVYLEPGEAVALDA 264

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN-TGPYTAMVCGRSCLAG 300
             L   +LD+  N  +L I D S   H+PD +       +       +T  + G SCLAG
Sbjct: 265 GILVGEILDLPSNGMDLAITDISATCHMPDVIEAPYRPALMDEADSGHTYRLGGPSCLAG 324

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTIKAIREFSY 359
           D+ G++ +++P+ IG R +F D A Y++ + N FNG+ +PTIA+ N     ++ +R+F Y
Sbjct: 325 DVIGDYTWDQPLTIGQRFAFLDQAHYSMVKTNTFNGVPLPTIALWNSKTDALRIVRQFDY 384

Query: 360 NDYYNNLS 367
           +D+ + LS
Sbjct: 385 SDFKDRLS 392


>gi|323486584|ref|ZP_08091905.1| hypothetical protein HMPREF9474_03656 [Clostridium symbiosum
           WAL-14163]
 gi|323399965|gb|EGA92342.1| hypothetical protein HMPREF9474_03656 [Clostridium symbiosum
           WAL-14163]
          Length = 383

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 132/378 (34%), Positives = 222/378 (58%), Gaps = 12/378 (3%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           ++KTPYYL+D+  L  NL+    +   AG K+LLA K F+ + ++  L +Y+ G+ +S L
Sbjct: 7   LLKTPYYLVDETLLKQNLEILGEVSGRAGCKILLAQKAFSMFSVYPLLREYLAGSAASGL 66

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           +E  LGHE+FGGETH ++ AY++ E D +L   D ++FN+ SQ+ K+ ++ +   K  GL
Sbjct: 67  FEARLGHEEFGGETHVFSAAYREDEFDEILRYADHVVFNSPSQVKKYGERVKAAGKSAGL 126

Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSFL 173
           R+NP  S      + DP  P SRLG   ++   +       +  ++G  FH  CE  S  
Sbjct: 127 RLNPECSTQEGHAIYDPCSPGSRLGTTKRNLESAGKFETELLPYLDGFHFHTLCEQNS-D 185

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
                L  +E++FG+++ +++W++LGGG H T +DY  +   + + +  EKY ++IYLEP
Sbjct: 186 ALETTLAVLEEKFGNYLPRLKWLNLGGGHHITREDYDRERLIRLILKLREKYGLEIYLEP 245

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYT 289
           GEA+V N   L +TVL+  EN   + ++D+S   H+PD L       +     P   P+T
Sbjct: 246 GEAVVLNAGFLVSTVLETMENGIEIAVLDTSAACHMPDVLEMPYRPPVLGGGEPGEKPHT 305

Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349
             + G +CLAGD+ G++ F+ P+  G ++ F D+A Y + + N FNG+ +P++ ++++ G
Sbjct: 306 YRLGGPTCLAGDVIGDYSFDTPLTEGKKVIFSDMALYTMVKNNTFNGMPLPSLVLRDLQG 365

Query: 350 TIKAIREFSYNDYYNNLS 367
             + ++EF Y D+   LS
Sbjct: 366 RFRPVKEFGYEDFKGRLS 383


>gi|33591910|ref|NP_879554.1| carboxynorspermidine decarboxylase [Bordetella pertussis Tohama I]
 gi|33598196|ref|NP_885839.1| carboxynorspermidine decarboxylase [Bordetella parapertussis 12822]
 gi|33603092|ref|NP_890652.1| carboxynorspermidine decarboxylase [Bordetella bronchiseptica RB50]
 gi|33566754|emb|CAE38967.1| carboxynorspermidine decarboxylase [Bordetella parapertussis]
 gi|33568723|emb|CAE34481.1| carboxynorspermidine decarboxylase [Bordetella bronchiseptica RB50]
 gi|33571554|emb|CAE41037.1| carboxynorspermidine decarboxylase [Bordetella pertussis Tohama I]
 gi|332381327|gb|AEE66174.1| carboxynorspermidine decarboxylase [Bordetella pertussis CS]
          Length = 365

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 204/367 (55%), Positives = 269/367 (73%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           M+KTPYYLIDK+ LL NL+    IR+ +G K+LLALKCFA W +FD + +YMDGTTSSSL
Sbjct: 1   MLKTPYYLIDKRALLQNLEVIRRIRERSGAKVLLALKCFATWSVFDLMREYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           +EV LG EKFGGETHAY+VAY + +ID V++  D IIFN++SQL ++  +A  +    GL
Sbjct: 61  FEVRLGREKFGGETHAYSVAYAEDDIDDVVACADKIIFNSLSQLERYAPRASAIP--RGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP +S S + LA+P RPFSRLGE   D+I   +  ++G M HNNCEN+ F  F A+L 
Sbjct: 119 RLNPGISVSGYDLANPARPFSRLGETDLDRIAQAMPMIDGFMVHNNCENRDFTRFDALLT 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E  +GH + QI WISLGGGIHFT+  Y +  FC RL+ FSE+Y VQ+YLEPGEA +TN
Sbjct: 179 ELEHRYGHLLGQINWISLGGGIHFTEPGYALDAFCDRLRRFSEQYGVQVYLEPGEAAITN 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           T TL  TVLD+  N KNL IVD++ EAH+ D L+Y+ SA + P+ GP+  ++ G SCLAG
Sbjct: 239 TATLEVTVLDVMRNEKNLAIVDAATEAHMLDLLIYRMSARVQPDQGPHRYVIYGNSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           D+FGEF FE P++ G RIS +D AGY + +KNWFNG+ MP IA++ +DG I+ +REF Y 
Sbjct: 299 DVFGEFSFESPLQPGSRISIQDAAGYTMVKKNWFNGVRMPAIAIRELDGEIRLVREFGYQ 358

Query: 361 DYYNNLS 367
           DY ++LS
Sbjct: 359 DYVDSLS 365


>gi|307718013|ref|YP_003873545.1| carboxynorspermidine decarboxylase [Spirochaeta thermophila DSM
           6192]
 gi|306531738|gb|ADN01272.1| carboxynorspermidine decarboxylase [Spirochaeta thermophila DSM
           6192]
          Length = 385

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 125/373 (33%), Positives = 207/373 (55%), Gaps = 8/373 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P +++D+  +  NL     +++  G ++LLALK FA W +   ++ Y+ GT +S ++
Sbjct: 14  VPSPCFVVDRDAVEENLKILDRVQREGGARVLLALKGFAMWSLAPLVSSYLSGTCASGVW 73

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI--G 119
           E  LG E FGG    Y  AYK+ E+  +L+  D +IFN+ SQ  +F        +++  G
Sbjct: 74  EARLGRECFGGIVSTYGPAYKEDEVRELLTLTDHLIFNSFSQWERFGPLVGSAPRRVEAG 133

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +R+NP  S +   + DP+ P SRLG          +  ++GL FH  CE        A+L
Sbjct: 134 IRVNPERSGAPAAIYDPSGPNSRLGVVRSRFRPELLDGISGLHFHTLCEQN-VDALEAVL 192

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
           +  E+ FG F+ ++ W++ GGG H T  DY V      +++F  +Y V +YLEPGEAI  
Sbjct: 193 QAFEERFGEFVPRMRWVNWGGGHHITRPDYDVDRLIDLVRDFRSRYGVDVYLEPGEAIAL 252

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGR 295
            T  L   V+DI EN   + ++D+S   H+PD L       ++    P   PYT  + G 
Sbjct: 253 GTGVLVAEVVDIVENGMRIAVLDTSATTHMPDVLEMPYRPEVWGAGLPGERPYTYRLGGI 312

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK-NVDGTIKAI 354
           SCLAGD+ G++ F++P+++GDR+ F+D+A Y + +   FNG+ +P+I +  + + +   +
Sbjct: 313 SCLAGDVIGDYSFDRPLEVGDRLVFDDMAHYTMVKTTTFNGVKLPSIGIWSSKEQSFTLV 372

Query: 355 REFSYNDYYNNLS 367
           R F Y ++   LS
Sbjct: 373 RSFEYEEFKRRLS 385


>gi|319404893|emb|CBI78494.1| carboxynorspermidine decarboxylase [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 365

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 209/367 (56%), Positives = 270/367 (73%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MI TPYYLIDK KL+ N+ T  ++R  + VK+LLALKCFA W +FD ++QYMDGTTSSSL
Sbjct: 1   MIGTPYYLIDKSKLIKNMKTIAHLRAISRVKVLLALKCFATWSLFDVMSQYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           YE+ LG EKFG ETHAY+VA+ D EID      D IIFN++ QL +F +       + GL
Sbjct: 61  YELRLGKEKFGKETHAYSVAWADDEIDEACGYADKIIFNSIQQLKRFAN--TTKTIQRGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP +S S F LA+P+RPFSRLGE  +D I+  +  +NGLM HNNCEN  F  F+ ML 
Sbjct: 119 RLNPGISASNFDLANPSRPFSRLGETNQDAIKEVLPLINGLMIHNNCENSDFNLFNQMLN 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
           +IE++F      I+WISLGGGIHFT ++YP++D  +RLK FS+ Y V ++LEPGEA +T 
Sbjct: 179 HIEEKFKELFVAIDWISLGGGIHFTAENYPLEDLAKRLKHFSQTYGVTVFLEPGEAAITK 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           +TTL  +VLD   N KNL IVDSS+EAH+ D L+Y+E+A + PN GPY  MVCG+SCLAG
Sbjct: 239 STTLEVSVLDTLYNKKNLAIVDSSIEAHMLDLLIYRENAKLEPNHGPYEIMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFG F F +P+KIGD++SF+D AGY + +KNWFNG+ MP I +K  +GT+   R+FSYN
Sbjct: 299 DIFGTFQFPEPLKIGDKLSFQDAAGYTMVKKNWFNGVAMPAIVIKECNGTLTLQRQFSYN 358

Query: 361 DYYNNLS 367
           DY N+LS
Sbjct: 359 DYKNSLS 365


>gi|313205280|ref|YP_004043937.1| carboxynorspermidine decarboxylase [Paludibacter propionicigenes
           WB4]
 gi|312444596|gb|ADQ80952.1| carboxynorspermidine decarboxylase [Paludibacter propionicigenes
           WB4]
          Length = 376

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 130/372 (34%), Positives = 191/372 (51%), Gaps = 7/372 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I +P Y++D+    NNL     +++ AGV+++LA K FA W  F  + +Y+  +T+SSL 
Sbjct: 6   IPSPCYVLDEATFRNNLALIKSVKERAGVEIILAFKAFAMWSTFPIVREYIPYSTASSLA 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L +E+ G + H Y  AY D E   ++     I FN++ Q  +F  + Q  +   GLR
Sbjct: 66  EARLAYEEMGSKAHTYGPAYTDREFPEIMRCSSHITFNSLQQFERFYPQTQFENISCGLR 125

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP  S  +  L +P  P SRLG       +   + V GL FH  CE+ SF      L  
Sbjct: 126 INPEFSDVETDLYNPCAPGSRLGVVADLLGDKLPEGVEGLHFHTLCESTSFDMER-TLAV 184

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240
           +E++FG F  QI W+++GGG   T + Y V+     L+ F  KY   Q+ LEPG A    
Sbjct: 185 VEEKFGKFFPQINWLNMGGGHLMTKEGYDVEHLISLLQAFKAKYPHLQLILEPGSAFAWR 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVE-AHVPDYLLYQESATIY----PNTGPYTAMVCGR 295
           T  L ++V+DI EN      +       H+PD L       I        G  T  + G 
Sbjct: 245 TGVLVSSVVDIVENKGIKTAMLDVSFACHMPDCLEMPYKPAIVGATDAIPGKPTYRMGGN 304

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           SCL+GD +G++ F+  +KIGDRI FED+  Y + +   FNG++ P+I +       K +R
Sbjct: 305 SCLSGDFYGDWSFDHELKIGDRIIFEDMIHYTMVKTTMFNGVSHPSIGIWTKGNEFKLVR 364

Query: 356 EFSYNDYYNNLS 367
           EF Y DY   +S
Sbjct: 365 EFGYEDYKGRMS 376


>gi|327439420|dbj|BAK15785.1| diaminopimelate decarboxylase [Solibacillus silvestris StLB046]
          Length = 397

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 149/371 (40%), Positives = 208/371 (56%), Gaps = 7/371 (1%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P +++D++ L  NL     ++      +LLALK F+ W  F     Y+ G TSSSL+E
Sbjct: 28  PSPAFVVDERLLERNLKLLKSVQDRTNCDILLALKGFSMWSTFPMARNYLAGITSSSLFE 87

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKIGL 120
             LG E+FG E HAY  AY + EID  L+  D I+FN+  QLNK+KDK    + +  IGL
Sbjct: 88  ARLGFEEFGKEVHAYAPAYAEHEIDEYLTYVDHIVFNSFDQLNKYKDKVLNHEKNISIGL 147

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP  S  +  L DP    SRLG   +     E+  V G+ FH  CE         +L 
Sbjct: 148 RVNPGYSEVETPLYDPCYINSRLGIPVESFRPDELDGVEGIHFHAMCEQG-AEVLERILV 206

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
           + E+++G ++ Q++WI+ GGG H T   Y V+     +    E Y V++ LEPGEAI  N
Sbjct: 207 HFEEKYGEYLHQMKWINFGGGHHITKPGYDVELLVSLINRIQETYGVKVILEPGEAIALN 266

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296
           T  L  TVLDI +N   L IVDSS   H+PD L     A I     PN   YT  + G +
Sbjct: 267 TGYLVATVLDIVQNGMELAIVDSSATCHMPDTLEMPYRAHIIGSGQPNEKAYTYRLGGMT 326

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CLAGDI G++ F++P++ GD++ F D+A Y + + + FNG+N+P+I   N    +K IR 
Sbjct: 327 CLAGDIIGDYSFDEPLQAGDKLVFTDMAHYTMVKTHMFNGVNLPSICTYNEQDGVKVIRT 386

Query: 357 FSYNDYYNNLS 367
           F Y DY N LS
Sbjct: 387 FQYEDYRNRLS 397


>gi|146283566|ref|YP_001173719.1| carboxynorspermidine decarboxylase [Pseudomonas stutzeri A1501]
 gi|145571771|gb|ABP80877.1| carboxynorspermidine decarboxylase [Pseudomonas stutzeri A1501]
          Length = 365

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 215/367 (58%), Positives = 278/367 (75%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MIKTPYYLIDKQKLL NL+   Y+R+ +G K LLALKCFA W +FD + QYMDGTTSSSL
Sbjct: 1   MIKTPYYLIDKQKLLGNLEKIAYVREQSGAKALLALKCFATWSVFDLMQQYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           YE+ LG +KF GETHAY+VA+ D EI+ +++NCD IIFN++ QL +F +         GL
Sbjct: 61  YELKLGRQKFAGETHAYSVAWADDEIEEMVANCDKIIFNSIGQLERFAEA--TEGTIRGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP VS S ++LADP RPFSRLGE    KIE+ I  ++G MFHNNCEN SF  F  ML 
Sbjct: 119 RVNPQVSSSDYLLADPARPFSRLGEHDPAKIEAMIGKISGFMFHNNCENSSFELFDKMLS 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            IE+ FGH + Q++W+SLGGGIHFT + YP+  FC RLK FSEK+ VQ+YLEPGEA +T 
Sbjct: 179 TIEERFGHLLEQVQWVSLGGGIHFTGEGYPLDAFCARLKAFSEKFGVQVYLEPGEAAITM 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           + +L  TVLD   N KNL +VDSS+EAH+ D L+Y+ +A + PN G ++ MVCG+SCLAG
Sbjct: 239 SASLEVTVLDTLYNGKNLAVVDSSIEAHMLDLLIYRLNAKMAPNDGEHSYMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGE+ F++P+ IGDR+SF D AGY + +KNWFNG+ MP+I VK +DG+++ +REF +N
Sbjct: 299 DIFGEYQFDRPLAIGDRLSFIDAAGYTMVKKNWFNGLKMPSIVVKQLDGSVEVVREFDFN 358

Query: 361 DYYNNLS 367
           DY ++LS
Sbjct: 359 DYLSSLS 365


>gi|331005657|ref|ZP_08329024.1| putative carboxynorspermidine decarboxylase [gamma proteobacterium
           IMCC1989]
 gi|330420515|gb|EGG94814.1| putative carboxynorspermidine decarboxylase [gamma proteobacterium
           IMCC1989]
          Length = 395

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 128/383 (33%), Positives = 216/383 (56%), Gaps = 18/383 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P ++ID+  +  NL    Y+++ +G K+L ALK F+ W +   +NQY+ G  +S  +
Sbjct: 14  VPSPCFVIDEVAIERNLSVLNYVQEKSGAKVLAALKAFSCWHLAPLVNQYLSGICASGYH 73

Query: 62  EVMLGHEKFG-----GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKL 114
           E  LG+E++      GE H ++ A+   E D VL   + I+FN+ SQ  K+  +  A + 
Sbjct: 74  EARLGYEEYTKKGEQGEVHVFSAAFSQQEFDHVLPIANHIMFNSFSQWEKYKAQGMAHQQ 133

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174
           + + GLRINP  S     + DP    SRLG    +     ++ ++GL FH  CE      
Sbjct: 134 NIQFGLRINPQHSEGTTEIYDPCAAGSRLGIPISEFASKRLEGISGLHFHTLCEQG-LEP 192

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
               L  +E++F  +++ ++WI+ GGG H +  DY V+   + +K F++KY+VQ+YLEPG
Sbjct: 193 LRRTLAAVEEKFSDYLSAMQWINFGGGHHISHPDYDVEGLIKLIKSFAKKYNVQVYLEPG 252

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG-------- 286
           EAI   +  L + VLD+    ++  I+D+S   H+PD L       ++ + G        
Sbjct: 253 EAIAIRSGVLVSEVLDVMHTDRSQAILDTSATCHMPDTLEMPYRPDVFLSGGIKSGEANQ 312

Query: 287 -PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
            PY   + G +CLAGD+  ++ FE+P+++GDR+ F+D+A Y + + N FNGI +P IA+ 
Sbjct: 313 LPYNYRLGGMTCLAGDVISDYSFEEPLQVGDRLMFDDMAHYTMVKTNTFNGIRLPAIAIW 372

Query: 346 N-VDGTIKAIREFSYNDYYNNLS 367
           N     ++ +++F Y+D+ N LS
Sbjct: 373 NSKSDKLEVVKQFDYDDFKNRLS 395


>gi|332283898|ref|YP_004415809.1| putative carboxynorspermide decarboxylase [Pusillimonas sp. T7-7]
 gi|330427851|gb|AEC19185.1| putative carboxynorspermide decarboxylase [Pusillimonas sp. T7-7]
          Length = 368

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 202/366 (55%), Positives = 276/366 (75%), Gaps = 2/366 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TPYYLIDK  L  NLDT  YIRK++G K+LLALKCFA W +FD + ++MDGTTSSSLY
Sbjct: 5   LPTPYYLIDKPALQRNLDTIDYIRKHSGAKVLLALKCFATWSVFDLMRRHMDGTTSSSLY 64

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LGH+KFGGETHAY+VA+ D EI+ V++NCD IIFN+++QL +F  KAQ     +GLR
Sbjct: 65  EVKLGHQKFGGETHAYSVAFADHEIEEVVANCDKIIFNSINQLERFAPKAQGKP--MGLR 122

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP +S + F LADP R +SRLGE    +I + +  ++G+M HNNCEN  F  F  +L  
Sbjct: 123 LNPGISCAGFDLADPARTYSRLGETDPARILAVVDQLDGVMIHNNCENSDFARFDDLLTQ 182

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           +E+ +G  + +++W+SLGGGI FT +DYPV  FCQRL+ F+++Y VQ+YLEPGEA V ++
Sbjct: 183 VEQTYGDILKRLKWVSLGGGISFTAQDYPVDVFCQRLRRFAQEYDVQVYLEPGEAAVRHS 242

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGD 301
           TTL  +VLD+  N K+L +VDSS EAH+ D L+Y+E+A +    G +  M+CG++CLAGD
Sbjct: 243 TTLEVSVLDVGFNGKHLAVVDSSTEAHMLDLLIYRETAPVGDGIGEHEYMICGKTCLAGD 302

Query: 302 IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361
           IFGE  F  P+K+GDRIS  D AGY + +KNWFNG++MP+IA+K  DG+++ +REFS++D
Sbjct: 303 IFGEGRFAAPLKVGDRISIGDAAGYTMVKKNWFNGVHMPSIAIKEADGSMRVVREFSFDD 362

Query: 362 YYNNLS 367
           Y N+LS
Sbjct: 363 YVNSLS 368


>gi|222153445|ref|YP_002562622.1| carboxynorspermidine decarboxylase [Streptococcus uberis 0140J]
 gi|222114258|emb|CAR42867.1| putative carboxynorspermidine decarboxylase [Streptococcus uberis
           0140J]
          Length = 375

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 134/371 (36%), Positives = 202/371 (54%), Gaps = 6/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+ID+ +L+ NL+    ++  AG K+LLA K ++ +  +  + QY+ GTT+S LY
Sbjct: 6   VPTPSYVIDEGQLIKNLEILKSVQDEAGCKILLAQKAYSLFATYPLIGQYLAGTTASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LGHE+ GGE H +  A+KD ++  +L   D I+FN+  QL K  +        IGLR
Sbjct: 66  EAKLGHEEMGGEVHVFAPAFKDHDMKELLEIADHIVFNSERQLRKHAEACHHAGVSIGLR 125

Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +NP +S        DP    SR G          ++ ++G  FH  CE          LK
Sbjct: 126 LNPEISTQNDHDQYDPCAYGSRFGVTESHFHPEVLELIDGFHFHTLCEQN-VDDLVTTLK 184

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
             E +FG ++ Q++W++LGGG H T  DY +    Q +K   E Y + IYLEPGEAI  N
Sbjct: 185 VFEAKFGSYLHQLKWLNLGGGHHITRADYDLPTLVQEIKRLKETYKIDIYLEPGEAIALN 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296
              L T VLDI EN  + +I+D+S   H+PD +       +          +T  +   +
Sbjct: 245 AGYLATEVLDIVENGISTLILDASATCHMPDVIEMPYRPPLKDAFDAQEKAFTYRLSSNT 304

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CL GDI G++ FEK V+IG R+ F+D+A Y+  + N FNGI +P++ + +  G    I+ 
Sbjct: 305 CLTGDIIGDYSFEKAVEIGQRLYFQDMAIYSFVKNNTFNGIGLPSLYLMDQSGDCHLIKS 364

Query: 357 FSYNDYYNNLS 367
           F+Y D+ + LS
Sbjct: 365 FTYEDFKSRLS 375


>gi|238927123|ref|ZP_04658883.1| carboxynorspermidine decarboxylase [Selenomonas flueggei ATCC
           43531]
 gi|238885103|gb|EEQ48741.1| carboxynorspermidine decarboxylase [Selenomonas flueggei ATCC
           43531]
          Length = 378

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 124/369 (33%), Positives = 193/369 (52%), Gaps = 7/369 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP YL+ ++ L  NL     + ++ G  +LLA KCF+ +  +  + +Y+ GTT+S +Y
Sbjct: 13  VPTPSYLVYEELLEKNLKVLAEVAEDTGAAILLAQKCFSMYHYYPLIGRYLAGTTASGIY 72

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+ G E H +  AY+D EI+ + S CD IIFN+ SQ  +F   A+      G+R
Sbjct: 73  EARLSQEEMGRENHVFKPAYEDEEIEQLASICDHIIFNSFSQWERFGTAARLHGVSCGMR 132

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP  S     + DP  P SRLG K  D  E  +  ++GL FH  CE          L  
Sbjct: 133 INPECSTQDHAIYDPCAPGSRLGVKIADFREDLLAGLDGLHFHTLCEQG-ADALEETLDA 191

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           +E++FG ++  ++W++ GGG H T   Y +    + ++   EKY V +YLEPGEA+  N 
Sbjct: 192 VEEKFGKYLHGMKWLNFGGGHHITRVGYDISLLKKLIRRVQEKYHVAVYLEPGEAVALNA 251

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRSC 297
             L + VLD+      ++   +    H+PD +       +          +T  + G +C
Sbjct: 252 GFLVSEVLDVQAGGNVILNTSAV--CHMPDVIEMPYRPPVVGAGKAGERAHTYTLAGPTC 309

Query: 298 LAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF 357
           LAGD  G + F+ P+ IGDR+ F D+A Y + + N FNG+ +P I   +  G  + +R F
Sbjct: 310 LAGDTIGTYSFDTPLCIGDRVVFGDMAIYTMVKNNTFNGMPLPHIIAVSPQGEWETVRTF 369

Query: 358 SYNDYYNNL 366
            Y+D+   L
Sbjct: 370 GYDDFKMRL 378


>gi|94985418|ref|YP_604782.1| carboxynorspermidine decarboxylase [Deinococcus geothermalis DSM
           11300]
 gi|94555699|gb|ABF45613.1| carboxynorspermidine decarboxylase [Deinococcus geothermalis DSM
           11300]
          Length = 408

 Score =  270 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 124/388 (31%), Positives = 209/388 (53%), Gaps = 23/388 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           I +P +++D+ +L  NL     +++ +G ++++A K FA W +F  L +Y   G T+SSL
Sbjct: 22  IPSPAFVLDESRLRRNLALISAVQRASGAQIIVAFKGFAMWSVFPLLREYGITGATASSL 81

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD-----KAQKLH 115
            E +L  E+  GE H Y  AY + +   +L   D I+FN+ +Q  +F+      +A    
Sbjct: 82  NEAILAREELQGEVHVYAPAYSEEDFPRILDLADHIVFNSFAQWERFRPQVEAARAAGKA 141

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175
             +GLRINP  +  +  L +P  PFSRLG   ++     +  ++GL FH  CE K     
Sbjct: 142 LHVGLRINPEYAEVETDLYNPAGPFSRLGVTRREFRPELLDGIDGLHFHTLCE-KDSDTL 200

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
              L+ +E+ FG F+ ++ W++ GGG   T + Y ++   + ++ F EK+ V + LEPG 
Sbjct: 201 ERTLEVVERNFGEFLPRMRWVNFGGGHLMTREGYDLERLVRVVRAFREKWDVHVILEPGS 260

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-------- 287
           A    T  L ++VLD+  N+K++ I+D SV AH+PD L       I     P        
Sbjct: 261 AFGWQTGWLVSSVLDVIHNVKDIAILDISVSAHMPDVLEMPYRPRILGARDPGEGQETHR 320

Query: 288 --------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                   +  ++ G +CLAGD+ GE+ F++P+ +GDR+ F+D+  Y + +  +FNG+  
Sbjct: 321 EAHDVPPGFPYIIGGTTCLAGDVVGEYVFDQPLNVGDRVVFDDMIHYTMVKTTFFNGVKH 380

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNNLS 367
           P I + + DGT + ++ F Y ++   LS
Sbjct: 381 PDIGILHRDGTYERVKTFGYEEFKAKLS 408


>gi|291562597|emb|CBL41413.1| carboxynorspermidine decarboxylase [butyrate-producing bacterium
           SS3/4]
          Length = 377

 Score =  270 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 130/372 (34%), Positives = 213/372 (57%), Gaps = 8/372 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+ID++KL  NL+    ++ + G K+LLA K F+ +  +  + QY+DGTT+S L+
Sbjct: 6   LPTPCYVIDEKKLRKNLEILKKVKDDTGCKILLAQKAFSNFFEYPLIGQYLDGTTASGLF 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LG+EK G E H +  A+K+ EI  +   C+ ++FN+ SQL K+ D  ++    IG+R
Sbjct: 66  EAKLGYEKMGKENHVFAPAFKESEIGEITDICEHLVFNSFSQLEKYADFCKEKGVSIGIR 125

Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +NP  S      + DP  P SRLG    +  E  ++ ++G+ FH  CE  S       LK
Sbjct: 126 VNPECSTQGDHAIYDPCAPGSRLGVTLANFREDLVEKLDGIHFHTLCEQNSDD-LETTLK 184

Query: 181 NIEKEFGHF--ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
            +E++FG +  +  I+W+++GGG H T  DY +    + ++   E Y V +Y+EPGEA+ 
Sbjct: 185 AVEEKFGKYLKLPNIKWLNMGGGHHITRNDYDIDRLERCIRHMQETYDVTVYVEPGEAVA 244

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCG 294
            N   L T V+DI +N    +I+D+S   H+PD L       +      +   YT  +  
Sbjct: 245 LNAGYLVTEVMDIVDNGIRTLILDASAACHMPDVLEMPYRPPLKDSGEADEKQYTYRLSS 304

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            +CLAGD+ G++ F+  ++IGDR+ FED+A Y++ + N FNG+ +P+IA  + +G    +
Sbjct: 305 MTCLAGDVIGDYSFDHEIRIGDRLYFEDMAIYSMVKNNTFNGMCLPSIARMDENGECSVV 364

Query: 355 REFSYNDYYNNL 366
           + F Y ++   L
Sbjct: 365 KTFGYEEFVRRL 376


>gi|251779914|ref|ZP_04822834.1| carboxynorspermidine decarboxylase [Clostridium botulinum E1 str.
           'BoNT E Beluga']
 gi|243084229|gb|EES50119.1| carboxynorspermidine decarboxylase [Clostridium botulinum E1 str.
           'BoNT E Beluga']
          Length = 380

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 129/372 (34%), Positives = 216/372 (58%), Gaps = 8/372 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P YL+D++ L  NL+   Y+++  G  ++LA K F+ +  F  + +Y+ G TSSSL+
Sbjct: 10  LPSPCYLVDERLLKKNLERLNYVQEETGANIILATKAFSMYSTFPLIGRYLKGVTSSSLF 69

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK---I 118
           E  LG+E+ G + H ++ AY+  E D ++  CD I+FN+ +Q   +KD+ +    K    
Sbjct: 70  EARLGYEEMGKQVHIFSPAYRQDEFDEIMKYCDHIVFNSFNQWKLYKDRVKNYSNKKIEC 129

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
           G+RINP  S  +  + +P    SR+G   ++    ++  ++GL FH  CE  S    +  
Sbjct: 130 GIRINPEYSEIETDIYNPCFENSRMGVTLENFKIEDLDGIDGLHFHTMCEQNS-DTLART 188

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
           +K I+ +FG +I  ++WI+ GGG H T +DY ++     +     KY V IYLEPGEA+ 
Sbjct: 189 IKVIDDKFGKYIKNMKWINFGGGHHITREDYDMETLLDIILYIKNKYDVDIYLEPGEAVA 248

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----YTAMVCG 294
            N+  L  T+LD+ +N  N+ IVD+S   H+PD L       I  +  P    YT  +  
Sbjct: 249 LNSGFLVCTILDVIKNGMNIAIVDTSAACHMPDVLEMPYRPHIINSGMPNQYEYTYRLGS 308

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            +CLAGD+ G++ F++P+K+GD++ F D+A Y++ + N FNGIN+P I   + +  ++ I
Sbjct: 309 PTCLAGDVIGDYSFKEPLKVGDKLVFCDMAIYSMVKNNTFNGINLPAIVKYSDEKGVEII 368

Query: 355 REFSYNDYYNNL 366
           ++F Y D+ + L
Sbjct: 369 KKFGYEDFKSRL 380


>gi|254780741|ref|YP_003065154.1| carboxynorspermidine decarboxylase [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040418|gb|ACT57214.1| carboxynorspermidine decarboxylase [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 367

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 367/367 (100%), Positives = 367/367 (100%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL
Sbjct: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL
Sbjct: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK
Sbjct: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
           NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN
Sbjct: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG
Sbjct: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN
Sbjct: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360

Query: 361 DYYNNLS 367
           DYYNNLS
Sbjct: 361 DYYNNLS 367


>gi|319406376|emb|CBI80017.1| carboxynorspermidine decarboxylase [Bartonella sp. AR 15-3]
          Length = 365

 Score =  269 bits (687), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 207/367 (56%), Positives = 272/367 (74%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MI+TPYYLIDK KL+ N+ T  ++R  +GVK+LLALKCFA W +FD ++QYMDGTTSSSL
Sbjct: 1   MIETPYYLIDKSKLIKNMKTIAHLRAISGVKVLLALKCFATWSLFDIMSQYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           YE+ LG EKFG ETHAY+VA+ D EID   S  D IIFN++ QL +F +     + + GL
Sbjct: 61  YELRLGKEKFGKETHAYSVAWADDEIDEACSYADKIIFNSIQQLQRFANA--TKNIQRGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP +S S F LA+P+RPFSRLGE  +D I+  +  +NGL+ HNNCEN +F  F+ ML 
Sbjct: 119 RLNPGISASNFDLANPSRPFSRLGETNQDAIKKVLPLINGLLIHNNCENSNFNLFNQMLN 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            IE++F      ++W+SLGGGIHFT ++YP++D  +RLK FS+ Y + ++LEPGEA +T 
Sbjct: 179 QIEEKFKDLFVAVDWVSLGGGIHFTAENYPLEDLAERLKCFSQTYGITVFLEPGEAAITK 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           +TTL  +VLD   N KNL IVDSS+EAH+ D L+Y+E+A + PN GPY  MVCG+SCLAG
Sbjct: 239 STTLEVSVLDTLYNKKNLAIVDSSIEAHMLDLLIYRENAKLEPNHGPYEIMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFG F F KP+KIGD++SF+D AGY + +KNWFNG+ MP I  K  +G +   R+FSYN
Sbjct: 299 DIFGTFQFPKPLKIGDKLSFQDAAGYTMVKKNWFNGVAMPAIVTKECNGVLTLQRKFSYN 358

Query: 361 DYYNNLS 367
           DY N+LS
Sbjct: 359 DYKNSLS 365


>gi|192360578|ref|YP_001981999.1| carboxynorspermidine decarboxylase [Cellvibrio japonicus Ueda107]
 gi|190686743|gb|ACE84421.1| carboxynorspermidine decarboxylase [Cellvibrio japonicus Ueda107]
          Length = 407

 Score =  269 bits (687), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 134/382 (35%), Positives = 209/382 (54%), Gaps = 17/382 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P ++IDK  + +NL     +++ +GVK+L ALK F+ W +     QY+ GT +S L+
Sbjct: 27  VPSPCFVIDKAAVEDNLKILNRVQRESGVKVLGALKAFSCWSLAPLFRQYLSGTCASGLH 86

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-----QKLHK 116
           E  LG E+FGGE H Y+ AYK+ +++ +L   D ++FN+V+Q  +FK+ +     ++   
Sbjct: 87  EARLGREEFGGEVHCYSAAYKESDLEQILEIADHVLFNSVTQWQQFKNLSLAAQKRRPQL 146

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENK 170
             GLRINP  S     L DP  P SR+G        + +      + ++G  FH  C+  
Sbjct: 147 AFGLRINPEHSEGDVPLYDPCAPCSRMGIPIASLDAAIVADPDFLQGISGFHFHTLCQQD 206

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY 230
                   L  + + FG +   I WI+ GGG H + +DY V D    LK F   Y +Q+Y
Sbjct: 207 -LPPLERTLNAVIRRFGKYFKHIHWINFGGGHHISREDYQVDDLIAMLKNFQANYDLQVY 265

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP--- 287
           LEPGEA+   +  L   V+DI+ N     I+D+S   H+PD L     A I     P   
Sbjct: 266 LEPGEAVAIRSGVLVAEVVDITWNTVAQAILDTSATCHMPDVLEMPYRADILGAAMPNEL 325

Query: 288 -YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
            +T  + G +CLAGDI G++ F +P+++G R+ F+D+A Y + +   FNGIN+P+IAV +
Sbjct: 326 AHTYRLGGMTCLAGDIIGDYSFAQPLQVGQRLVFDDMAHYTMVKTTTFNGINLPSIAVWD 385

Query: 347 V-DGTIKAIREFSYNDYYNNLS 367
                ++ IR+F Y D+   LS
Sbjct: 386 SRTDELEVIRQFGYEDFKTRLS 407


>gi|325681251|ref|ZP_08160781.1| carboxynorspermidine decarboxylase [Ruminococcus albus 8]
 gi|324107173|gb|EGC01459.1| carboxynorspermidine decarboxylase [Ruminococcus albus 8]
          Length = 381

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 137/370 (37%), Positives = 209/370 (56%), Gaps = 7/370 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP YL+ ++ L +N++  L +RK  G K+LLA K F+ +  +  +  Y+DGTT+S LY
Sbjct: 12  LHTPCYLVSEKALKHNMEILLSVRKRTGCKILLAQKAFSMYSAYPLMRPYLDGTTASGLY 71

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKIG 119
           E  LGH++FGGETH +  AYK  ++  ++  CD IIFN+ SQ    +D  +K       G
Sbjct: 72  EAKLGHDEFGGETHVFAPAYKHEDMAELVKICDDIIFNSFSQWRLHRDTVRKSGRRISCG 131

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +R NP  S  +  + +P    SRLG   ++    E+  + GL FH  CE      F+  +
Sbjct: 132 IRCNPLYSEIETDIYNPCFTGSRLGVTPENFESGELDGIEGLHFHTMCEQG-ADVFARTV 190

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
            +IEK FG ++ Q++W++ GGG H T   Y V   C+ +    +KY+VQ+YLEPGEA   
Sbjct: 191 PHIEKHFGGYLGQMKWLNFGGGHHITKAGYDVDLLCRTVDYIQQKYAVQVYLEPGEACAL 250

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGR 295
           N   L T VLD   N  +  IVD+S   H+PD L       +         P+T  + G 
Sbjct: 251 NAGWLVTQVLDTGRNGTDFAIVDTSAACHMPDVLEMPYRPELIGAGEKGEKPHTYRLGGP 310

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           +CLAGDI G++ F+ P+K GDR+ F D+A Y++ + N FNG+ +P I ++  DG+ + ++
Sbjct: 311 TCLAGDIIGDYSFDAPLKAGDRLVFCDMAIYSMCKNNTFNGMPLPDIYLEKPDGSTELVK 370

Query: 356 EFSYNDYYNN 365
            F Y D+   
Sbjct: 371 HFGYEDFKQR 380


>gi|320333520|ref|YP_004170231.1| carboxynorspermidine decarboxylase [Deinococcus maricopensis DSM
           21211]
 gi|319754809|gb|ADV66566.1| carboxynorspermidine decarboxylase [Deinococcus maricopensis DSM
           21211]
          Length = 393

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 131/375 (34%), Positives = 216/375 (57%), Gaps = 10/375 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P +++D+++LL NL+    ++  +G ++++A K FA W  FDT+  Y+ G T+SSL 
Sbjct: 20  LPSPAFVLDERRLLRNLELIKRVQDESGARMIVAFKGFAMWSTFDTVRDYVYGATASSLN 79

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD-----KAQKLHK 116
           E +L  E+   E H Y  AY D E   +L+  D I FN+ SQ  +FKD     +AQ  H 
Sbjct: 80  EAILAREEMRKEVHVYAPAYSDAEFPDMLALADHITFNSFSQWARFKDQVMAARAQGRHI 139

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
            +G+R+NP  +     L +P+ P+SRLG    +     +  V+GL FH  CEN S     
Sbjct: 140 GVGIRVNPEYAEVGTALYNPSMPYSRLGVTRAEFRPDLLDGVDGLHFHTLCENDS-SVLE 198

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
            +L+  E+ FG F+ Q++W++ GGG   T + Y ++   + +K+F E++ V + LEPG A
Sbjct: 199 RVLEVFEQNFGEFLPQMKWVNFGGGHLMTREGYDIERLIRLVKDFRERHDVDVILEPGSA 258

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----YTAMV 292
               T  L ++VLD+  N K++VI+D SV AH+PD L       I   + P    +T ++
Sbjct: 259 YGWQTGWLISSVLDVVRNEKDIVILDVSVSAHMPDVLEMPYRPGILNASEPGERAHTYLL 318

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352
            G +CL+GD+ GE+ F+ P+++GDR+ F+D+  Y + +  +FNG+  P I +   DG  +
Sbjct: 319 GGTTCLSGDVVGEYSFDAPLRVGDRVIFDDMIHYTMVKTTFFNGVKHPDIGIWTKDGQYR 378

Query: 353 AIREFSYNDYYNNLS 367
            ++ F Y ++   LS
Sbjct: 379 HVKSFGYEEFKAKLS 393


>gi|187933334|ref|YP_001885214.1| carboxynorspermidine decarboxylase [Clostridium botulinum B str.
           Eklund 17B]
 gi|187721487|gb|ACD22708.1| carboxynorspermidine decarboxylase [Clostridium botulinum B str.
           Eklund 17B]
          Length = 380

 Score =  268 bits (686), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 133/372 (35%), Positives = 216/372 (58%), Gaps = 8/372 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P YL+D++ L  NL+   Y++K  G  ++LA K F+ +  F  + +Y+ G TSSSL+
Sbjct: 10  LPSPCYLVDERLLKKNLERLNYVQKETGANIILATKAFSMYSTFPLIGKYLKGVTSSSLF 69

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK---I 118
           E  LG+E+ G + H Y+ AY+  E D ++  CD IIFN+ +Q   +KDK +K   K    
Sbjct: 70  EARLGYEEMGKQVHIYSPAYRQDEFDEIMKYCDHIIFNSFNQWRLYKDKVKKYKNKKIEC 129

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
           G+RINP  S  +  + +P    SR+G   ++    ++  ++G+ FH  CE  S    +  
Sbjct: 130 GIRINPEYSEIETDIYNPCFENSRMGVSLENFKSEDLYGIDGVHFHTMCEQNS-DTLART 188

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
           +K ++K FG +I +++W++ GGG H T +DY +    + +     KY + IYLEPGEA+ 
Sbjct: 189 IKVVDKNFGKYIKKMKWLNFGGGHHITREDYDINTLIETILYMKNKYEIDIYLEPGEAVA 248

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCG 294
            N+  L  TVLDI +N  N+ IVD+S   H+PD L       I      N   Y   +  
Sbjct: 249 LNSGFLVCTVLDIIKNGMNIAIVDTSAACHMPDVLEMPYRPHIINSGMSNQYEYAYRLGA 308

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            +CLAGDI G++ F++P+K+GD++ F D+A Y++ + N FNGIN+P I   + +  ++ I
Sbjct: 309 PTCLAGDIIGDYSFKEPLKVGDKLVFCDMAIYSMVKNNTFNGINLPAIVKYSDEKGVEII 368

Query: 355 REFSYNDYYNNL 366
           ++F Y D+ + L
Sbjct: 369 KKFGYEDFKSRL 380


>gi|254785712|ref|YP_003073141.1| carboxynorspermidine decarboxylase [Teredinibacter turnerae T7901]
 gi|237686123|gb|ACR13387.1| carboxynorspermidine decarboxylase [Teredinibacter turnerae T7901]
          Length = 395

 Score =  268 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 133/375 (35%), Positives = 217/375 (57%), Gaps = 11/375 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TP Y++D+ ++ +NL    +++K +G K+LLALK F+ + +   + +Y+ G  +S + 
Sbjct: 22  VQTPCYVVDECRVEHNLKILHHVQKASGAKVLLALKAFSMYSLAPLVMRYLHGVCASGIN 81

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL-----HK 116
           E  LG E++ GE H Y  A++  E D +++  + +IFN+VS+  +++ +A +      + 
Sbjct: 82  EARLGREEYQGEVHTYCAAFRPHEFDDIVALSNHVIFNSVSEWQRYQARALEHLDARDNL 141

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
             GLRINP  S  +  + DP  P SR+G         ++  ++GL FH  CE   F   +
Sbjct: 142 AFGLRINPQHSEGETPMYDPCAPCSRMGIPLASLDGVDLTGISGLHFHTLCEQD-FAPLA 200

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
             L  +E++FGH +T++ WI+ GGG H T + Y V+   +R+K FS+ Y VQ+Y+EPGEA
Sbjct: 201 RTLDAVEEKFGHLLTKMRWINFGGGHHITREGYNVEGLIERVKLFSKTYGVQVYIEPGEA 260

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMV 292
           I  N   L T VLD   N  +L I D+S   H+PD L       I     P   P+T  +
Sbjct: 261 IALNAGVLITEVLDTLHNTMDLAITDTSATCHMPDVLEMPYRPRITGAGEPGEKPHTYRL 320

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-GTI 351
            G SCLAGD+ G++ F++P++ G R+ FED+A Y + +   FNGIN+P I V N +  ++
Sbjct: 321 GGPSCLAGDVIGDYSFDEPLQPGSRLQFEDMAIYTMVKNTTFNGINLPDIMVWNSETQSL 380

Query: 352 KAIREFSYNDYYNNL 366
           + ++ F Y D+   L
Sbjct: 381 RLVKSFGYEDFKRRL 395


>gi|332701708|ref|ZP_08421796.1| carboxynorspermidine decarboxylase [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332551857|gb|EGJ48901.1| carboxynorspermidine decarboxylase [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 397

 Score =  268 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 120/385 (31%), Positives = 200/385 (51%), Gaps = 20/385 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP +++D++ +  NL     +      ++LLALK FA W  F  + + + G T+SS +
Sbjct: 14  VPTPCFVVDERLIERNLAVLRSVIDRTDCRILLALKGFAMWSTFPLIARSLHGCTASSPH 73

Query: 62  EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--L 114
           E  L  E+F       E HA+   Y   ++  + S CD I+FN+ +Q  +++   ++   
Sbjct: 74  EARLAREEFARGANEREVHAFAAGYSQADVRELASLCDHIVFNSFNQWKRYRKIVRESGR 133

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK----IESEIKNVNGLMFHNNCENK 170
             + G+R+NP  S     + DP  P SR+G   KD     ++S    + GL FH  CE  
Sbjct: 134 EVECGMRVNPEHSEGAVPIYDPCSPGSRMGVLRKDFQPAELDSPDGRIVGLHFHTLCEQN 193

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY 230
                +  L ++E +FG F  +++W++LGGG H +  DY V      +     KY +Q+Y
Sbjct: 194 -ADALARTLPHVEDKFGEFFPRLKWLNLGGGHHISRPDYDVDLLVNEVNRIKSKYGLQVY 252

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN------ 284
           LEPGEAI  +T  L  TVLD+ +N   + I+D+S  AH+PD L          +      
Sbjct: 253 LEPGEAIALDTGVLVATVLDVIDNQGKIAILDTSAAAHMPDVLEMPYRPRCVLDGENAGA 312

Query: 285 --TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
                +   + G SCLAGD+ G + F + +++GD+++F D+A Y++ +   FNG+ +P+I
Sbjct: 313 AGEKTHDYRLAGHSCLAGDVIGAYSFHRELQVGDKLAFMDMAIYSMVKTTTFNGLQLPSI 372

Query: 343 AVKNVDGTIKAIREFSYNDYYNNLS 367
           A    +G  + ++ F Y D+   LS
Sbjct: 373 AKITQEGEFRMVKRFGYEDFRGRLS 397


>gi|118590403|ref|ZP_01547805.1| carboxynorspermidine decarboxylase [Stappia aggregata IAM 12614]
 gi|118436866|gb|EAV43505.1| carboxynorspermidine decarboxylase [Stappia aggregata IAM 12614]
          Length = 365

 Score =  268 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 220/367 (59%), Positives = 271/367 (73%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MI TPYYLIDK KLL N++   Y+R+ +G K LLALKCFA W +FD +  YMDGTTSSSL
Sbjct: 1   MIDTPYYLIDKAKLLRNMEKIAYVREKSGAKALLALKCFATWCVFDFMRDYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            EV LGHE+FG ETHAY+VAY D EID V+S+ D IIFN++SQL ++ DK+       GL
Sbjct: 61  NEVRLGHERFGKETHAYSVAYADYEIDDVISHADKIIFNSISQLERYADKS--AGIVRGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP VS S F LADP RPFSRLGE    KIE  +  ++G M HNNCEN  F  F  ML 
Sbjct: 119 RLNPMVSSSSFDLADPARPFSRLGEWDVAKIEKVMDRISGFMIHNNCENADFSLFDRMLG 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
           +IE +FG  + + EW+SLGGGIHFT  DYP+  F  RLK FSE Y VQ+YLEPGEA +T 
Sbjct: 179 DIETKFGALLHRAEWVSLGGGIHFTGDDYPLDLFADRLKAFSENYGVQVYLEPGEASITR 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           +TTL TTVLD   N KNL IVD+S+EAH+ D L+Y+E+A + PN GP++ M+CG+SCLAG
Sbjct: 239 STTLETTVLDTLFNGKNLAIVDASIEAHMLDLLIYRETAKVAPNEGPHSYMICGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGEF+F   +K GDR+S +D AGY + +KNWFNG+ MP IAVK VDGT++ +REFSY 
Sbjct: 299 DIFGEFNFPAELKTGDRVSIQDAAGYTMVKKNWFNGVKMPAIAVKEVDGTVRVVREFSYQ 358

Query: 361 DYYNNLS 367
           DY  +LS
Sbjct: 359 DYEQSLS 365


>gi|261414737|ref|YP_003248420.1| carboxynorspermidine decarboxylase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261371193|gb|ACX73938.1| carboxynorspermidine decarboxylase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302326289|gb|ADL25490.1| carboxynorspermidine decarboxylase [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 375

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 132/370 (35%), Positives = 206/370 (55%), Gaps = 6/370 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P +++D+ +L  N++    I+K  GVK++ ALK ++ W  F  + +Y+ G T+SSL 
Sbjct: 7   VPSPCFVLDETRLRRNMEILDDIQKKTGVKIICALKGYSFWRSFPLIGEYLAGATASSLN 66

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+   E H +   Y+D EIDA+L   D I FN+ SQ  ++KDK        G+R
Sbjct: 67  EARLAREEMNKEVHVFAPVYEDDEIDAILDAADHITFNSFSQWQRYKDKTLAHGVSAGIR 126

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP  S  +  L +P   FSRLG   K+     +  ++GL FH  CE         +L  
Sbjct: 127 VNPEFSTVETDLYNPCGKFSRLGVTEKEFKPELLDGIDGLHFHALCEQD-ADALEGVLAA 185

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240
            EK FG ++ Q++W++ GGG H T KDY   +  + LK+FS +Y   Q+ +EPGEAI   
Sbjct: 186 FEKHFGKYLPQMKWVNFGGGHHITRKDYHRDELVRILKDFSARYPHLQVIMEPGEAIGWQ 245

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296
           T  L T+V DI  N  ++ I++ S+ AH+PD L      ++     P    +T  + G S
Sbjct: 246 TGELVTSVGDIVHNEMDIAILNVSISAHMPDCLEMPYRPSVIGAAFPGEKAHTYKLTGNS 305

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CLAGD  G+F F++P+K+GDRI FED+  Y + +  +FNG+  P+I   + +G    + +
Sbjct: 306 CLAGDQLGDFSFDEPLKVGDRIIFEDMIHYTMVKTTFFNGVRHPSIGKFDENGKFHLLHK 365

Query: 357 FSYNDYYNNL 366
           F+Y  +   L
Sbjct: 366 FTYEQFKEKL 375


>gi|83854922|ref|ZP_00948452.1| NspC, carboxynorspermidine decarboxylase [Sulfitobacter sp.
           NAS-14.1]
 gi|83842765|gb|EAP81932.1| NspC, carboxynorspermidine decarboxylase [Sulfitobacter sp.
           NAS-14.1]
          Length = 364

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 212/366 (57%), Positives = 265/366 (72%), Gaps = 2/366 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPYYLIDK +L  N++   ++R+ +G K LLALKCFA W +FD + QYMDG+TSSSLY
Sbjct: 1   MKTPYYLIDKSRLQANMEKIAWLREASGAKSLLALKCFATWSVFDFMAQYMDGSTSSSLY 60

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG+EKFGGETHAY+VAY D EI  VL+N D IIFN++ QL++F   A       GLR
Sbjct: 61  EVKLGYEKFGGETHAYSVAYDDDEIAEVLANSDKIIFNSIGQLDRFD--AASAGHTRGLR 118

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP VS S+F LADP RPFSRLGE    +I +    + GLMFHNNCEN  F  F+ ML  
Sbjct: 119 VNPGVSTSEFDLADPARPFSRLGEHDPAQIAAVADRITGLMFHNNCENDDFDRFADMLTL 178

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           IE  FG  I +++WISLGGGIHFT + YP+     RLK  S+ Y VQ+YLEPGEA +T  
Sbjct: 179 IEDRFGDTIHRMDWISLGGGIHFTGEGYPLDRLAARLKTLSDTYGVQVYLEPGEAAITGA 238

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGD 301
            TL TTVLD   N KNL IVDSS+EAH+ D L+Y+E A + PNTG +  M+CG+SCLAGD
Sbjct: 239 ATLETTVLDTLHNGKNLAIVDSSIEAHMLDLLIYREPAKVAPNTGDHDWMICGKSCLAGD 298

Query: 302 IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361
           IFGEF F+ P+K GDRISF+D AGY + +KNWFNG+ MP IA++ +DGTI ++R F Y D
Sbjct: 299 IFGEFKFDTPLKPGDRISFQDAAGYTMVKKNWFNGVKMPGIAIRELDGTITSVRSFDYED 358

Query: 362 YYNNLS 367
           + + LS
Sbjct: 359 FKSALS 364


>gi|284038400|ref|YP_003388330.1| carboxynorspermidine decarboxylase [Spirosoma linguale DSM 74]
 gi|283817693|gb|ADB39531.1| carboxynorspermidine decarboxylase [Spirosoma linguale DSM 74]
          Length = 386

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 123/372 (33%), Positives = 195/372 (52%), Gaps = 7/372 (1%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           +I +P +++++ KL  NL+    +++ AGV ++LALK F+ +  F  + QY+ G T+SSL
Sbjct: 16  VIPSPCFVLEEAKLRRNLELIDSVQRAAGVTIILALKGFSMYSAFPLVRQYLSGATASSL 75

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+ L +E  G + H Y  AY+D   D V+S    + FN+ SQ  +FKD+        G+
Sbjct: 76  NEIKLVNEYMGVQAHTYIPAYQDATFDEVVSRSSHLTFNSWSQWERFKDRVVGKPVSCGI 135

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP  S     + +P  P SRLG       +   + + G+ FH  CEN SF      L+
Sbjct: 136 RVNPQYSEVATDMYNPCVPGSRLGANRDQLPDQLPEGLEGIHFHTLCENDSF-TLERTLE 194

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E  F + + Q +W++ GGG   T + Y        L  F +KY+V I LEPG AI   
Sbjct: 195 ALESRFDNLLHQAKWVNFGGGHLMTREGYDTNHLIGLLTAFRQKYNVDIILEPGSAIAWQ 254

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVE-AHVPDYLLYQESATIYP-----NTGPYTAMVCG 294
           T  L +TVLD+  +    V +  +   AH+PD L       I         G  T  + G
Sbjct: 255 TGVLVSTVLDVFNSQGIDVAILDTSFAAHMPDTLEMPYKPRIIHSYHEPVAGKPTYRLGG 314

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            +CLAGD  G++ F+KP+++GD + F+D+  Y + +   FNG+N+P I V   D + + +
Sbjct: 315 MTCLAGDFMGDYSFDKPLEVGDTVVFDDMIHYTMVKTTTFNGVNLPAIGVWKEDESFQLV 374

Query: 355 REFSYNDYYNNL 366
           + F Y  + + L
Sbjct: 375 KTFGYESFKDRL 386


>gi|319409446|emb|CBI83095.1| carboxynorspermidine decarboxylase [Bartonella schoenbuchensis R1]
          Length = 365

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 202/367 (55%), Positives = 269/367 (73%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MIKTPYYLIDK KL+ N++    +R+ +G+K+LLALKCFA W +FD +++YMDG+TSSSL
Sbjct: 1   MIKTPYYLIDKSKLIKNMEIIARLREMSGIKVLLALKCFATWSVFDFMSEYMDGSTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           YE+ LG EKFG ETHAY+VA+ D EID V +  D IIFN++ QL +F   +     + GL
Sbjct: 61  YELRLGREKFGKETHAYSVAWADDEIDEVCTYADKIIFNSIQQLQRF--ASTTKTIQRGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP +S S F LA+P+RPFSRLGE  +  IE  +  +NGLM HNNCEN  F  F+ ML 
Sbjct: 119 RLNPGISASNFDLANPSRPFSRLGETNQSAIEEVLPLINGLMIHNNCENADFNLFNQMLN 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
           +IE++F      ++WISLGGGIHFT  +YP++   +RLK FS+ Y+V ++LEPGEA +T 
Sbjct: 179 HIEEKFKKLFIAVDWISLGGGIHFTGNNYPLEALAERLKRFSQTYNVTVFLEPGEAAITK 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           +TTL  +VLD   N KNL IVDSS+EAH+ D L+Y+E+A + PN G +  MVCG+SCLAG
Sbjct: 239 STTLEVSVLDTLYNEKNLAIVDSSIEAHMLDLLIYRENAKLEPNQGSHEIMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFG F F + +KIGDR+SF+D AGY + +KNWFNG+ MP I +K  +G +   R+F+YN
Sbjct: 299 DIFGTFQFPELLKIGDRLSFQDAAGYTMVKKNWFNGVAMPAIVIKECNGNLTIQRQFNYN 358

Query: 361 DYYNNLS 367
           DY N+LS
Sbjct: 359 DYKNSLS 365


>gi|126665111|ref|ZP_01736094.1| carboxynorspermidine decarboxylase [Marinobacter sp. ELB17]
 gi|126630481|gb|EBA01096.1| carboxynorspermidine decarboxylase [Marinobacter sp. ELB17]
          Length = 365

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 214/367 (58%), Positives = 277/367 (75%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           M+KTPYYLIDK KLL NL+    +R+ +G K LLALKCFA WG+FD +  YMDGTTSSSL
Sbjct: 1   MLKTPYYLIDKSKLLRNLEIIARVREESGAKSLLALKCFATWGVFDLMQAYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            EV LG +KF GETHAY+VAY D EI+ +L++ D IIFN++SQL +F + +   ++  GL
Sbjct: 61  NEVKLGKQKFAGETHAYSVAYADDEIEDILAHSDKIIFNSISQLQRFSEAS--ANQTRGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP VS S F LADP RP SRLGE   +KI   +  V+G MFHNNCEN SF  F  +L+
Sbjct: 119 RVNPGVSSSGFALADPARPHSRLGEHDPEKIAGILDQVSGFMFHNNCENASFERFDELLQ 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            IE  FGH +  + W+SLGGGIHFT + YP++ FCQRLK F+E+Y+VQ+YLEPGEA +T+
Sbjct: 179 VIETRFGHLLENVNWVSLGGGIHFTGEGYPLERFCQRLKAFAERYAVQVYLEPGEAAITH 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           +T+L  TVLD+  N K+L IVDSS+EAH+PD L+Y+ESA + PN G YT  +CG SCLAG
Sbjct: 239 STSLEVTVLDLLNNDKDLAIVDSSIEAHMPDLLIYRESAKLEPNRGNYTYQICGTSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGEF FEKP++IGD +SF+D AGY + +K+WFNG+ MP+IAVK +DG I+ ++ F Y+
Sbjct: 299 DIFGEFQFEKPLQIGDCLSFQDAAGYTMVKKSWFNGVKMPSIAVKQLDGRIELVKSFGYD 358

Query: 361 DYYNNLS 367
           D+   LS
Sbjct: 359 DFVQALS 365


>gi|86140068|ref|ZP_01058631.1| carboxynorspermidine decarboxylase [Roseobacter sp. MED193]
 gi|85823163|gb|EAQ43375.1| carboxynorspermidine decarboxylase [Roseobacter sp. MED193]
          Length = 389

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 122/368 (33%), Positives = 197/368 (53%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP +++D++ +  NL     + + +G  +L ALK F+ + +   +  Y+ GT +S L+
Sbjct: 23  VPTPCFVVDEKAVERNLMVLADVAERSGAHVLAALKAFSMFSLAPLVCHYLSGTCASGLH 82

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E++GGE   +   YKD EI+ +++  D +IFN+V+Q ++F  + Q   K++GLR
Sbjct: 83  EARLAREEYGGEVATFCAGYKDSEIEEIIALSDHMIFNSVAQKDRFLARCQAASKQVGLR 142

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP  S  +    DP  P SRLG        + +  V+GL  H  CE   F   +     
Sbjct: 143 INPEHSEGEIAKYDPCAPCSRLGTPISQLTAAALDGVDGLHMHTLCEQG-FAPLARTWAA 201

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           IE + G F+ Q++W++ GGG H T  DY        + E   KY V +YLEPGEA+  + 
Sbjct: 202 IEPKLGPFLGQLKWLNFGGGHHITRDDYDRDALVDFILEIRSKYHVDVYLEPGEAVALDA 261

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY-PNTGPYTAMVCGRSCLAG 300
             L   VLD+  N  +L I D S   H+PD +       +       ++    G SCLAG
Sbjct: 262 GILVGEVLDLPRNGVDLAITDISATCHMPDVIEAPYRPALLGEVETGHSYRFGGPSCLAG 321

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-GTIKAIREFSY 359
           D+ G++   +P++IGDR +F D A Y++ + N FNG+ +P I + N     ++++++F Y
Sbjct: 322 DVIGDYKMAQPLQIGDRFAFLDQAHYSMVKTNTFNGVALPAILLWNSQTDDLRSVKQFGY 381

Query: 360 NDYYNNLS 367
            D+   LS
Sbjct: 382 ADFKERLS 389


>gi|291513891|emb|CBK63101.1| carboxynorspermidine decarboxylase [Alistipes shahii WAL 8301]
          Length = 379

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 127/374 (33%), Positives = 189/374 (50%), Gaps = 9/374 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P Y++D++ L  NL T   +R+ +G ++++ALK  A W +F  L ++ DG T+SS  
Sbjct: 7   LPSPCYVLDEELLDRNLATVDRVRRESGAEIIVALKACAMWSIFPELAKHSDGATASSAA 66

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+FG   H Y   Y D  ID +L+  D I FN++SQ  +F  KA       GLR
Sbjct: 67  EARLVFEEFGRPAHTYAPVYTDSNIDEILNCSDHITFNSLSQFRRFGQKALINGISCGLR 126

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIES--EIKNVNGLMFHNNCENKSFLCFSAML 179
           INP  S  +  L +P  P SRLG   +           V GL FH  CE++        L
Sbjct: 127 INPQYSPVETDLYNPCVPGSRLGVTAEQLAAHGGLPAGVEGLHFHVLCESR-PEHLQKAL 185

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238
           + +E  FG ++ +I+W+++GGG   T   Y        LK F  ++   ++ LEPG A  
Sbjct: 186 EAVETHFGAYLDRIKWLNMGGGHLMTASWYDCDRLIALLKAFRSRHPNLRLILEPGSAFT 245

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVE-AHVPDYLLYQESATIY----PNTGPYTAMVC 293
             T  L +TV DI EN      +       H+PD L       +     P  G     + 
Sbjct: 246 WRTGFLVSTVEDIVENGGVTTAMLDVSFACHMPDCLEMPYKPAVIGAHEPADGEKRWRMG 305

Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353
           G SCLAGD  G++ F++ +K+G+R+ FED+  Y + +   FNG++ P I +   DG    
Sbjct: 306 GTSCLAGDYCGDWAFDRELKVGERVVFEDMIHYTMVKTTMFNGVHHPAIVIARRDGRTDV 365

Query: 354 IREFSYNDYYNNLS 367
           IREF Y D+ N +S
Sbjct: 366 IREFGYEDFRNRMS 379


>gi|319899498|ref|YP_004159595.1| carboxynorspermidine decarboxylase [Bartonella clarridgeiae 73]
 gi|319403466|emb|CBI77046.1| carboxynorspermidine decarboxylase [Bartonella clarridgeiae 73]
          Length = 365

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 209/367 (56%), Positives = 272/367 (74%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MI+TPYYLIDK KL+ N+ T  ++R  +GVK+LLALKCFA W +FD ++QYMDGTTSSSL
Sbjct: 1   MIRTPYYLIDKSKLIKNMKTIAHLRAISGVKVLLALKCFATWSLFDVMSQYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           YE+ LG EKFG ETHAY+VA+ D EID   S  D IIFN++ QL +F +       + GL
Sbjct: 61  YELRLGKEKFGKETHAYSVAWADDEIDEACSYADKIIFNSIQQLQRFANA--TKTIQRGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP +S S F LA+P+RPFSRLGE  +D I+  +  +NGLM HNNCEN  F  F+ ML 
Sbjct: 119 RLNPGISASNFDLANPSRPFSRLGETNQDAIKEVLPFINGLMIHNNCENSDFNLFNQMLN 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            IE++F      ++W+SLGGGIHFT ++YP++D  +RLK FS+ Y V ++LEPGEA +T 
Sbjct: 179 QIEEKFKELFIAVDWVSLGGGIHFTAENYPLEDLAERLKCFSQIYGVTVFLEPGEAAITK 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           +TTL  +VLD   N KNL IVDSS+EAH+ D L+Y+E+A + PN GPY  MVCG+SCLAG
Sbjct: 239 STTLEVSVLDTLYNKKNLAIVDSSIEAHMLDLLIYRENAKLEPNHGPYEIMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFG F F +P+KIGD++SF+D AGY + +KNWFNG+ MP I +K  +GT+   R+FSYN
Sbjct: 299 DIFGTFKFPEPLKIGDKLSFQDSAGYTMVKKNWFNGVAMPAIVIKECNGTLTLQRQFSYN 358

Query: 361 DYYNNLS 367
           DY N+LS
Sbjct: 359 DYQNSLS 365


>gi|254510022|ref|ZP_05122089.1| carboxynorspermidine decarboxylase [Rhodobacteraceae bacterium
           KLH11]
 gi|221533733|gb|EEE36721.1| carboxynorspermidine decarboxylase [Rhodobacteraceae bacterium
           KLH11]
          Length = 389

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 123/368 (33%), Positives = 196/368 (53%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +  P +++DK+ +  NL     +   +G  +L ALK F+ + +   + QY+ GT +S +Y
Sbjct: 23  VPAPCFVVDKKAIERNLSILSGVGTRSGAHVLCALKAFSMFSLAPLVRQYLAGTCASGIY 82

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LG E +GGE   +   YK  +ID +LS  D IIFN+ +Q N+F  KAQ    ++GLR
Sbjct: 83  EARLGREDYGGEVATFCAGYKGADIDEILSLSDHIIFNSPAQKNRFLAKAQAAGVQVGLR 142

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP  S  +    DP  P SRLG        + +  V+GL  H  CE           + 
Sbjct: 143 INPEHSEGEIPKYDPCAPCSRLGMPVSQLTAATLTGVDGLHMHTLCEQG-VEPLLRTWEA 201

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           ++ +   F+++++W++ GGG H T  DY        +++  + Y + +YLEPGEA+  N 
Sbjct: 202 VQPKLAPFMSRLKWLNFGGGHHITRDDYDRDGLVAFIRDIRKTYDIDVYLEPGEAVALNA 261

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY-PNTGPYTAMVCGRSCLAG 300
             L   +LD+  N  NL I D S   H+PD +       +       +T  + G SCLAG
Sbjct: 262 GILVGEILDLPTNGMNLAITDISATCHMPDVIEAPYRPALMGEAEAGHTYRLGGPSCLAG 321

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-GTIKAIREFSY 359
           D+ G++ ++ P++IG R  F D A Y++ + N FNG+ +P IA+ N +   +K I++F Y
Sbjct: 322 DVIGDYTWDHPLEIGQRFVFLDQAHYSMVKTNTFNGVPLPAIALWNSETDDLKIIKQFGY 381

Query: 360 NDYYNNLS 367
           +D+   LS
Sbjct: 382 DDFRQRLS 389


>gi|15806427|ref|NP_295133.1| carboxynorspermidine decarboxylase [Deinococcus radiodurans R1]
 gi|6459163|gb|AAF10976.1|AE001986_1 carboxynorspermidine decarboxylase [Deinococcus radiodurans R1]
          Length = 416

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 123/386 (31%), Positives = 205/386 (53%), Gaps = 21/386 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           I +P +++D+ +L  NL    Y+++ +G ++++A K F+ W  F  L +Y   G T+SSL
Sbjct: 32  IPSPAFVLDETRLRRNLTLINYVQQQSGAQIIVAFKGFSMWSTFPLLREYGITGATASSL 91

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD-----KAQKLH 115
            E +L  E+  GE H Y  AY D +   +L   D ++FN+ +Q  +F+      +A    
Sbjct: 92  NEAILAKEEMQGEVHVYAPAYSDEDFPRILELADHLVFNSFAQWERFRPQVQAARAGGRE 151

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175
             +G+RINP  +  +  L +P  PFSRLG   ++  E  +  ++GL FH  CE K     
Sbjct: 152 LHVGIRINPEYAEVETDLYNPAGPFSRLGVTRREFREDLLDGIDGLHFHTLCE-KDSDTL 210

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
              L+ +E+ FG F+ ++ W++ GGG   T + Y +    + +K F EK+ V + LEPG 
Sbjct: 211 ERTLEVVERNFGEFLPRMNWVNFGGGHLMTREGYDIPRLIRVVKAFREKHGVHVILEPGS 270

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-------- 287
           A    T  L ++VLD+  N+K+  ++D SV AH+PD L       I     P        
Sbjct: 271 AFGWQTGWLVSSVLDVVHNVKDAALLDVSVSAHMPDVLEMPYRPRILGAGDPPLDDHREA 330

Query: 288 ------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                 Y  ++ G +CLAGD+ GE+ F   +K+G R+ F+D+  Y + +  +FNG+  P 
Sbjct: 331 QDTGSGYPYIIGGTTCLAGDVVGEYVFPHELKVGSRVVFDDMIHYTMVKTTFFNGVKHPD 390

Query: 342 IAVKNVDGTIKAIREFSYNDYYNNLS 367
           I + + DG+ + ++ F Y ++   LS
Sbjct: 391 IGILHADGSYERVKTFGYEEFKAKLS 416


>gi|254488768|ref|ZP_05101973.1| NspC [Roseobacter sp. GAI101]
 gi|214045637|gb|EEB86275.1| NspC [Roseobacter sp. GAI101]
          Length = 370

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 215/366 (58%), Positives = 265/366 (72%), Gaps = 2/366 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TPYYLIDK +LL NL+   ++R  +G K LLALKCFA W +FD + QYMDG+TSSSLY
Sbjct: 7   LQTPYYLIDKARLLPNLEKIAWLRAESGAKSLLALKCFATWSVFDFMAQYMDGSTSSSLY 66

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LGHEKF GETHAY+VAY D EI  VL+  D IIFN++ QL KF D AQ      GLR
Sbjct: 67  EVRLGHEKFPGETHAYSVAYADHEIAEVLACSDKIIFNSIGQLTKFADAAQGHI--KGLR 124

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP VS S+F LADP RPFSRLGE   D+I +    ++GLMFHNNCEN SF  F  ML  
Sbjct: 125 VNPGVSTSEFDLADPARPFSRLGEHDPDQIAAVADQISGLMFHNNCENDSFERFDEMLTL 184

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           IE  FG  I  ++WISLGGGIHFT  DYP+     RLK F++ Y VQ+YLEPGEA +T  
Sbjct: 185 IEGRFGAVIRDMDWISLGGGIHFTGADYPLDRLAARLKSFAQTYGVQVYLEPGEAAITGA 244

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGD 301
            TL  TVLD   N KNL IVDSS+EAH+ D L+Y+E A I P+TG +  M+CG+SCLAGD
Sbjct: 245 ATLEVTVLDTMYNGKNLAIVDSSIEAHMLDLLIYREPAKISPDTGDHEWMICGKSCLAGD 304

Query: 302 IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361
           IFGEF F+ P+K GDR+SF+D AGY + +KNWFNG+ MP IA++ +DGT + +R+F Y+D
Sbjct: 305 IFGEFRFDAPLKAGDRLSFQDAAGYTMVKKNWFNGVKMPGIAIRELDGTTRLVRDFDYDD 364

Query: 362 YYNNLS 367
           +   LS
Sbjct: 365 FAAALS 370


>gi|260913630|ref|ZP_05920106.1| carboxynorspermidine decarboxylase [Pasteurella dagmatis ATCC
           43325]
 gi|260632169|gb|EEX50344.1| carboxynorspermidine decarboxylase [Pasteurella dagmatis ATCC
           43325]
          Length = 371

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 215/370 (58%), Positives = 280/370 (75%), Gaps = 6/370 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TPYYLIDK KLL N++   Y+R+ +G K LLALKCFA WG+FD ++QYMDGTTSSSLY
Sbjct: 4   LQTPYYLIDKSKLLRNMEKIAYLREKSGAKALLALKCFATWGVFDFMSQYMDGTTSSSLY 63

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG EKFGGETHAY+VAY + EID V++N D IIFN+++QL +F ++   L    GLR
Sbjct: 64  EVQLGKEKFGGETHAYSVAYSNEEIDEVVANADKIIFNSINQLQRFANRTGDLP--RGLR 121

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP VS S F+LADP RP+SRLGE   +KI   +  + G MFHNNCEN+ F  F  ML  
Sbjct: 122 VNPRVSTSSFLLADPARPYSRLGEWDINKIREVMPLITGFMFHNNCENEDFDKFCEMLDR 181

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           IE EFG  + Q++W+SLGGGIHFT ++YP++ F +RLK+FS+K++VQ+YLEPGEA +T +
Sbjct: 182 IENEFGELLHQVKWVSLGGGIHFTGENYPLEAFAERLKQFSDKFAVQVYLEPGEASITLS 241

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----TGPYTAMVCGRSC 297
           T+L  TVLDI  N K L IVD++ EAH+ D L+Y+  A + P+     G Y  MVCG+SC
Sbjct: 242 TSLEVTVLDILNNGKELAIVDAATEAHMLDLLIYRSEAKLLPDAFKGKGEYEYMVCGKSC 301

Query: 298 LAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF 357
           LAGDIFGE+HFEKP+KIGDRISF D AGY + +KNWFNG+NMP I +K +DG+++ ++EF
Sbjct: 302 LAGDIFGEYHFEKPLKIGDRISFCDAAGYTMVKKNWFNGVNMPAIVIKELDGSVRVVKEF 361

Query: 358 SYNDYYNNLS 367
            Y DY  +LS
Sbjct: 362 GYQDYVESLS 371


>gi|313157700|gb|EFR57111.1| carboxynorspermidine decarboxylase [Alistipes sp. HGB5]
          Length = 376

 Score =  267 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 126/372 (33%), Positives = 196/372 (52%), Gaps = 8/372 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P Y++D++ L  NL     +R+ +G ++++ALK  A W +F  L ++ DG T+SS  
Sbjct: 7   LPSPCYVLDEELLDRNLAIIDRVRRESGAEIIVALKACAMWSIFPELARHSDGATASSAA 66

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+FG   H Y   Y D  I+ +L   D I FN+V+Q  +F   A       GLR
Sbjct: 67  EARLVFEEFGRPAHTYAPVYTDRNIEEILRCSDHITFNSVAQFERFGPMALLRGISCGLR 126

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP  S  +  L +P  P SRLG    D ++     ++GL FH  CE++        L+ 
Sbjct: 127 INPQYSPVETDLYNPCVPGSRLGVTA-DLLKELPAGIDGLHFHVLCESR-PHHLRLALEA 184

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240
           +EK FG ++ +I+W+++GGG   T  +Y   +    L+EF  ++   ++ LEPG A    
Sbjct: 185 VEKHFGQYLDRIKWLNMGGGHLMTHAEYDCDELIALLREFKARHPHLRLILEPGSAFTWR 244

Query: 241 TTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGR 295
           T  L +T+ D +     + V++D S   H+PD L       I     P  G     + G 
Sbjct: 245 TGYLVSTIEDLVENAGVHTVMLDVSFACHMPDCLEMPYKPAIVGAHEPAEGEKRWRMGGT 304

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           SCLAGD +G++ F+  +K+G+RI FED+  Y + +   FNG+  P I +   DG I  +R
Sbjct: 305 SCLAGDYYGDWTFDHELKVGERIVFEDMIHYTMVKTTMFNGVAHPAIVIARRDGRIDVVR 364

Query: 356 EFSYNDYYNNLS 367
           EF Y D+ N +S
Sbjct: 365 EFGYEDFRNRMS 376


>gi|313672850|ref|YP_004050961.1| carboxynorspermidine decarboxylase [Calditerrivibrio nitroreducens
           DSM 19672]
 gi|312939606|gb|ADR18798.1| carboxynorspermidine decarboxylase [Calditerrivibrio nitroreducens
           DSM 19672]
          Length = 394

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 133/373 (35%), Positives = 212/373 (56%), Gaps = 8/373 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +++P YLI +  +  N      I++  G ++LLALK FA   +F  + +Y+DG  +S  Y
Sbjct: 23  VESPSYLISEDLIEENCKILHSIKERTGARILLALKAFALPEVFPIIGKYLDGVCASGPY 82

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LG E+FG E H ++ AY D  I  V++  D ++FN+++Q  K++D  +   K+IGLR
Sbjct: 83  EARLGREEFGKEVHTFSPAYTDETIKDVIATSDHVVFNSLNQFYKYRDLVKDAGKEIGLR 142

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP  S  +  L DP +  SR G    D   +++++++GL FH  C+         ++ +
Sbjct: 143 VNPGYSEVEIPLYDPCQVGSRFGVLSDDIKNADLESLDGLHFHAMCQQN-ADVLEKIVVS 201

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS--VQIYLEPGEAIVT 239
            +K F   I +++W++ GGG H T   Y  +     +K F   Y    +IYLEPGEA+V 
Sbjct: 202 FKKRFDDVIKKVKWVNFGGGHHITRDGYDREKLVSIIKNFYSDYPNIQKIYLEPGEAVVF 261

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGR 295
           N   L +TVLDI +N   + I+D+S E H+PD L       I         PYT  + G 
Sbjct: 262 NAGVLVSTVLDIIKNGMEIAILDTSAENHMPDVLAMPYRPEIFGSGLVGENPYTYRLGGV 321

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTIKAI 354
           +CLAGD+ G++ F+ P+K+GDR+ F D+A Y+  +   FNGI++P++ V N  +G +K +
Sbjct: 322 TCLAGDVIGDYSFKNPLKVGDRLVFTDMALYSFVKNTMFNGIHLPSLVVFNLKNGKLKVV 381

Query: 355 REFSYNDYYNNLS 367
           R F Y+DY   +S
Sbjct: 382 RRFGYHDYKGRVS 394


>gi|239994540|ref|ZP_04715064.1| Carboxynorspermidine decarboxylase [Alteromonas macleodii ATCC
           27126]
          Length = 391

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 132/371 (35%), Positives = 204/371 (54%), Gaps = 9/371 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I +P Y++++ KL+ NL+    ++  +G +++LALK F+ W  FD + QY+ G T+SS++
Sbjct: 25  IPSPCYVLEEAKLIKNLELMKRVQDESGARIILALKGFSMWSCFDIIKQYLHGATASSVW 84

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L   + G E HAY+ AYK  +   +    + + FN+++Q N  KD        +GLR
Sbjct: 85  EAKLA-AEMGKEVHAYSPAYKVNDAKELAGLVNHLSFNSLTQWNAHKDV--LAGVSLGLR 141

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP    +   L DP  P SRLG +  +   +++  + G   HN CE  SF      L+ 
Sbjct: 142 INPEHQEADTPLYDPAAPGSRLGIRASELEGADLSGIEGFHCHNLCECDSFATART-LEA 200

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240
           IEK FG ++ Q++W++LGGG   T + Y V+     LK+F  +Y    + LEPG A+   
Sbjct: 201 IEKRFGKWLGQLKWLNLGGGHLMTREGYDVEHLINTLKDFKARYPHLDVILEPGSAVAWQ 260

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296
           T  L   V+D+ EN  ++ I+D S  AH+PD L      TI     P+   Y   + G S
Sbjct: 261 TGPLICEVVDMVENDGDIAILDISATAHMPDVLEMPYRPTILSAGMPDEKAYNVKLGGNS 320

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CLAGD+   + F+ P+K GDR+ FED+  Y + +  +FNG+  P I +   +G  + +RE
Sbjct: 321 CLAGDVIDTYSFDAPLKAGDRLQFEDMMHYTMVKTTFFNGVEHPAIGILRSNGDFELVRE 380

Query: 357 FSYNDYYNNLS 367
           FSY D+   LS
Sbjct: 381 FSYEDFKGRLS 391


>gi|109897074|ref|YP_660329.1| carboxynorspermidine decarboxylase [Pseudoalteromonas atlantica
           T6c]
 gi|109699355|gb|ABG39275.1| carboxynorspermidine decarboxylase [Pseudoalteromonas atlantica
           T6c]
          Length = 375

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 128/371 (34%), Positives = 199/371 (53%), Gaps = 6/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I +P Y+ ++ KL  NL     +++ +GV+++LALK F  W  FD + QY+ G+T+S+++
Sbjct: 6   IPSPCYVCEEAKLEANLQLMQRVQQESGVEIILALKGFPMWSTFDLVKQYLQGSTASAVW 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LG E+ G + HA++ A+K  +ID ++   D I FN+  Q N+FK +  + +   G+R
Sbjct: 66  EARLGKEEIGKQVHAFSPAFKPADIDQLVDLVDHISFNSFGQWNRFKAQILQSNVSPGIR 125

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +N     +   L DP+ P SR G   KD   +++  + G   HN CE  SF     +L  
Sbjct: 126 LNAEHREADTELYDPSAPGSRFGILAKDLKGADLSGLEGFHIHNLCECDSFATERTILAV 185

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240
            E +FG +  QI+WI+ GGG   T   Y V+     LK F  ++    + LEPG A+   
Sbjct: 186 EE-KFGQYFEQIKWINFGGGHLMTKDGYDVEHLIATLKAFKARHPHLNVILEPGSAVAWQ 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296
           T  L   V+DI EN   + IVD S  AH+PD L       +      N   +T    G S
Sbjct: 245 TGPLVCEVIDIVENRDKIAIVDMSATAHMPDVLEMPYRPDVRGAGKANEKAFTYRFGGNS 304

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CL GD    + F+  ++IG+RI FED+  Y + +  +FNG+  P+I +   +G  + +R+
Sbjct: 305 CLTGDAIDLYSFDHELQIGERIIFEDMIHYTMVKTTFFNGVEHPSIGILRKNGEFELVRK 364

Query: 357 FSYNDYYNNLS 367
           F Y D+ N LS
Sbjct: 365 FEYEDFKNKLS 375


>gi|317057515|ref|YP_004105982.1| carboxynorspermidine decarboxylase [Ruminococcus albus 7]
 gi|315449784|gb|ADU23348.1| carboxynorspermidine decarboxylase [Ruminococcus albus 7]
          Length = 381

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 138/370 (37%), Positives = 209/370 (56%), Gaps = 7/370 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TP YL+ ++ L +N++  L +RK  G K+LLA K F+ +  +  +  Y+DGTT+S LY
Sbjct: 12  LRTPCYLVSEKALKHNMEILLSVRKRTGCKILLAQKAFSMYAAYPMMRPYIDGTTASGLY 71

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHKKIG 119
           E  LGHE+FGGETH ++ AYK  ++  ++  CD IIFN+ SQ        K        G
Sbjct: 72  EARLGHEEFGGETHVFSPAYKKEDMAELVKICDDIIFNSFSQWKLHRGNVKNCGRKVSCG 131

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +R NP  S     + +P    SRLG   ++    E+  + GL FH  CE       +  +
Sbjct: 132 IRCNPLYSEIDTDIYNPCFTGSRLGVTPENFESGELDGIEGLHFHTMCEQG-ADVLARTI 190

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
            +IEK FG +I Q++W++LGGG H T   Y V   C+ +    +KY VQ+YLEPGEA   
Sbjct: 191 PHIEKHFGSYIKQMKWVNLGGGHHITKAGYDVDLLCRTVDSIQQKYGVQVYLEPGEACAL 250

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGR 295
           N   L T VLDI +N     IVD+S   H+PD L       I          +   + G 
Sbjct: 251 NAGWLVTEVLDIGKNGIEFAIVDTSAACHMPDVLEMPYRPEIIGAGKEGEKKFCYRLGGP 310

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           +CLAGDI G++ F++P+K GDR+ F D+A Y++ + N FNG+ +P I ++ +DG++++++
Sbjct: 311 TCLAGDIIGDYAFDEPLKAGDRLVFCDMAIYSMCKNNTFNGMPLPEIYLEKLDGSVESVK 370

Query: 356 EFSYNDYYNN 365
            F Y D+   
Sbjct: 371 RFGYEDFKCR 380


>gi|262199658|ref|YP_003270867.1| carboxynorspermidine decarboxylase [Haliangium ochraceum DSM 14365]
 gi|262083005|gb|ACY18974.1| carboxynorspermidine decarboxylase [Haliangium ochraceum DSM 14365]
          Length = 399

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 137/381 (35%), Positives = 210/381 (55%), Gaps = 16/381 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TP YL D  +L  NL+     ++ A  K+LLALK FA W +F  + +Y+ G  +SS+ 
Sbjct: 20  LETPVYLCDLGRLRKNLEILADAQRRAECKILLALKGFAMWSVFPIVREYLSGVATSSVA 79

Query: 62  EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKL 114
           E  LG E+F G     E HAY  AY D +ID ++   D I+FN+V+Q  +   + +A   
Sbjct: 80  EARLGREEFCGDSDRFEVHAYAPAYTDADIDELVELSDHIVFNSVAQWQRHGPRVRAAGR 139

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---EIKNVNGLMFHNNCENKS 171
             +  LR+NP  S  +  L DP   FSRLG   ++       E+  ++GL FH  CE  S
Sbjct: 140 DIECALRLNPRHSEVEVALYDPCASFSRLGITPENFPAPGAPELDGISGLHFHTLCELGS 199

Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYL 231
                  +  +E+ FG  + ++ W++ GGG H T  DY ++   + ++ F +++ V +YL
Sbjct: 200 -DALERTVAAVEERFGEHLGKVRWVNFGGGHHITRPDYDIERLVRVVRGFQDRHGVAVYL 258

Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP---- 287
           EPGEAI  NT  L  +VLD+  N  NL I+D+S  AH+PD L       I     P    
Sbjct: 259 EPGEAIALNTGVLVASVLDVGHNDMNLAILDTSATAHMPDVLEMPYRPVITGAGAPGELA 318

Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
           +T  + G +CLAGD+ G++ F +P+++GD++ F D+A Y + +   FNG+ +P IA    
Sbjct: 319 HTYRLGGLTCLAGDVIGDYSFAEPLQVGDKLVFGDMAHYTMVKNTTFNGVRLPDIATYEP 378

Query: 348 D-GTIKAIREFSYNDYYNNLS 367
           D   ++ +R F Y DY N LS
Sbjct: 379 DTQAVEVVRRFGYEDYKNRLS 399


>gi|332142513|ref|YP_004428251.1| carboxynorspermidine decarboxylase [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327552535|gb|AEA99253.1| carboxynorspermidine decarboxylase [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 376

 Score =  265 bits (678), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 133/371 (35%), Positives = 206/371 (55%), Gaps = 9/371 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I +P Y++++ KL+ NL+    +++ +G +++LALK F+ W  FD + QY+ G T+SS++
Sbjct: 10  IPSPCYVLEEAKLIRNLELMKRVQEESGARIILALKGFSMWSCFDIIKQYLHGATASSVW 69

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L   + G E HAY+ AYK  +   +    + + FN++SQ N    K    +  +GLR
Sbjct: 70  EAKLA-AEMGKEVHAYSPAYKANDAKELAGLVNHLSFNSLSQWN--THKEALANVSLGLR 126

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP    +   L DP  P SRLG +  +  + ++  + G   HN CE  SF      L+ 
Sbjct: 127 INPEHQEADTPLYDPAAPGSRLGIRASELEDVDLTGIEGFHCHNLCECDSFATART-LEA 185

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240
           IEK FG ++ Q++W++LGGG   T + Y V      LK+F  +YS   + LEPG A+   
Sbjct: 186 IEKRFGKWLGQLKWLNLGGGHLMTSEGYDVDHLISTLKDFKTRYSHLDVILEPGSAVAWQ 245

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296
           T  L   V+D+ EN  ++ I+D S  AH+PD L      TI     P+   Y   + G S
Sbjct: 246 TGPLICEVVDMVENDGDIAILDISATAHMPDVLEMPYRPTILGAGMPDEKAYNVKLGGNS 305

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CLAGD+   + F++P+K GDR+ FED+  Y + +  +FNG+  P I +   +G  + +RE
Sbjct: 306 CLAGDVIDTYSFDEPLKAGDRLQFEDMMHYTMVKTTFFNGVEHPAIGILRANGDFELVRE 365

Query: 357 FSYNDYYNNLS 367
           FSY D+   LS
Sbjct: 366 FSYEDFKGRLS 376


>gi|226355695|ref|YP_002785435.1| carboxynorspermidine decarboxylase [Deinococcus deserti VCD115]
 gi|226317685|gb|ACO45681.1| putative carboxynorspermidine decarboxylase [Deinococcus deserti
           VCD115]
          Length = 393

 Score =  265 bits (678), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 119/389 (30%), Positives = 204/389 (52%), Gaps = 24/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           I +P +++D+ +L  NL     +++ +G ++++A K FA W  F  L +Y   G T+SSL
Sbjct: 6   IPSPAFVLDESRLRRNLSLISQVQRESGAQIIVAFKGFAMWSAFPLLREYGITGATASSL 65

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK---- 116
            E +L  ++  GE H Y  AY D +   +L   D ++FN+  Q  +F+ + Q   +    
Sbjct: 66  NEAILARQEMQGEVHVYAPAYSDEDFPRILELADHLVFNSFGQWERFRPQVQAAREQGRV 125

Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175
             +G+R+N      +  L +P  PFSRLG   ++  E  +  V+GL FH+ CEN S    
Sbjct: 126 LHVGIRVNHEYGEVETDLYNPAGPFSRLGVTRREFREDLLDGVDGLHFHSLCENDSTTLE 185

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
             ++   E++FG F+ +++W++ GGG   T   Y +    + +++F  ++ V + LEPG 
Sbjct: 186 RTLVA-FEEKFGEFLGRMKWVNFGGGHLMTRAGYDIPRLIRVIRDFKARHDVHVILEPGS 244

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-------- 287
           A    T  L ++VLD+  N+K+  ++D SV AH+PD L       I     P        
Sbjct: 245 AFGWQTGWLVSSVLDVVHNVKDAAVLDVSVSAHMPDVLEMPYRPRILGAGDPPEQGQHRS 304

Query: 288 ---------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
                    +  ++ G +CLAGD+ GE+ F +P+++GDR+ F+D+  Y + +  +FNG+ 
Sbjct: 305 DDGTAVAAGHPYIIGGTTCLAGDVIGEYIFPQPLQVGDRVVFDDMIHYTMVKTTFFNGVK 364

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYNNLS 367
            P I +   DG    I+ F Y ++   LS
Sbjct: 365 HPDIGILRPDGRYDRIKTFGYEEFKAKLS 393


>gi|34556614|ref|NP_906429.1| carboxynorspermidine decarboxylase (nspC) [Wolinella succinogenes
           DSM 1740]
 gi|34482328|emb|CAE09329.1| CARBOXYNORSPERMIDINE DECARBOXYLASE (NSPC) [Wolinella succinogenes]
          Length = 379

 Score =  265 bits (677), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 131/374 (35%), Positives = 215/374 (57%), Gaps = 9/374 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y++++ KL  NL+    +++ +G K+LLALK FA W  F  ++ Y+ G T+S L+
Sbjct: 7   IPTPCYVLEEAKLRANLEILDRVQRESGAKILLALKGFALWKSFPLVSSYLKGITASGLH 66

Query: 62  EVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--I 118
           E  LG E+F GGE H Y+ A+K+ EI  +++  D IIFN+ +Q  +FKD+ +   +    
Sbjct: 67  EAKLGKEEFRGGEVHVYSPAFKEPEIKELITFADHIIFNSPTQWARFKDQVKNAPRPIEC 126

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
           GLR+NP  S  +  + +P  P SRLG    +  +  ++ ++GL FH +CE  S       
Sbjct: 127 GLRLNPLYSEVEPPIYNPCIPGSRLGIPPSELSQEALEGIDGLHFHTHCEQNS-DALERT 185

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAI 237
           L++ E+ FG  + +++W++ GGG H T  DY V    Q ++EF ++++   +YLEPGEA+
Sbjct: 186 LEHFERHFGELLGRMKWVNFGGGHHITRADYDVDRLIQIIQEFRKRHNNIPVYLEPGEAV 245

Query: 238 VTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----TGPYTAMVC 293
              +  L   V+D+  N   + I+D S  AH+PD L       +  +       Y+  + 
Sbjct: 246 GWQSGFLLGEVVDVVRNGMEIAILDISAAAHMPDCLEMPYRPMVRGSAEAGEKRYSYRLG 305

Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353
           G +CLAGD+ G++ F+ P+K+GD++ FED+  Y I + N FNG+ +P+I V    G  + 
Sbjct: 306 GPTCLAGDVIGDYSFDSPLKVGDQLIFEDMIHYTIVKNNTFNGVPLPSIGVIRESGEFEL 365

Query: 354 IREFSYNDYYNNLS 367
             E+ Y++Y    S
Sbjct: 366 WHEYGYDEYKRRNS 379


>gi|254444830|ref|ZP_05058306.1| carboxynorspermidine decarboxylase [Verrucomicrobiae bacterium
           DG1235]
 gi|198259138|gb|EDY83446.1| carboxynorspermidine decarboxylase [Verrucomicrobiae bacterium
           DG1235]
          Length = 387

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 126/373 (33%), Positives = 197/373 (52%), Gaps = 9/373 (2%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y++D  +L +N++    I++  G K+L ALK FA   +F  +  Y+ G  +S  +E
Sbjct: 16  PSPAYVVDLARLRSNMEIIQSIQEQTGAKILAALKGFAMHSVFPLMRDYVAGVCASGPWE 75

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IGL 120
             LG E+FG E H +  A+   ++  VL+    I FN+++Q ++ +    +  +    GL
Sbjct: 76  AQLGAEEFGKEVHCFAPAFTAVDMQEVLTYAHHISFNSLAQFHQHQPAVAESKRTVSCGL 135

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP  S  +  + +P    SRLG +       ++  V GL FH  CE  S       L+
Sbjct: 136 RVNPEYSEVETDIYNPCVAGSRLGIRRPALAGQDLSEVEGLHFHTMCEQNS-DTLERTLE 194

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239
           + E +FG  + Q++W++ GGG H T   Y ++   + LK F  +Y   ++YLEPGEA+  
Sbjct: 195 HFEAKFGDLLPQMKWVNFGGGHHITSPTYDLERLVRVLKAFKSRYPHLEVYLEPGEAMAI 254

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT----GPYTAMVCGR 295
           NT  L  TVLDI +    + ++D S   H+PD L       I          +T  + G 
Sbjct: 255 NTGVLVATVLDIIDEAPPIAVLDLSATCHMPDVLEMPYRPEIVDAAEAGVKAHTYSLGGL 314

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-GTIKAI 354
           SCLAGD+ G + F++P++ GD+I F D+A Y + + + FNGI  P IA  N D   +  +
Sbjct: 315 SCLAGDMIGHYSFDQPLQPGDKIYFLDMAHYTMVKTSTFNGIKHPAIATWNPDTKDLTIV 374

Query: 355 REFSYNDYYNNLS 367
           REF Y DY N LS
Sbjct: 375 REFGYEDYRNRLS 387


>gi|121602791|ref|YP_988368.1| carboxynorspermidine decarboxylase [Bartonella bacilliformis KC583]
 gi|120614968|gb|ABM45569.1| carboxynorspermidine decarboxylase [Bartonella bacilliformis KC583]
          Length = 365

 Score =  265 bits (677), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 209/367 (56%), Positives = 265/367 (72%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MIKTPYYLIDK KL+ N++    +R+ +GVK LLALKCFA W +FD +++YMDGTTSSSL
Sbjct: 1   MIKTPYYLIDKSKLIKNMEIIARLREMSGVKTLLALKCFATWSLFDLMSEYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           YE+ LG EKFG ETHAY+VA+ D EID      D IIFN++ QL +F D         GL
Sbjct: 61  YELRLGKEKFGKETHAYSVAWADHEIDEACGYADKIIFNSIQQLLRFSDA--TQMIPKGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP +S S F LA+P+RPFSRLGE  ++ IE  +  +NGLM HNNCEN  F  F  ML 
Sbjct: 119 RLNPGISASNFDLANPSRPFSRLGESDQNSIEEVLPLINGLMIHNNCENADFHLFEQMLN 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E++F      ++WISLGGGIHFT ++YP+K F + LK FS+ Y V ++LEPGEA +T 
Sbjct: 179 FMEEKFKKLFFAVDWISLGGGIHFTAENYPLKTFAELLKRFSQTYGVTVFLEPGEAAITK 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           +TTL  +VLD   N KNL IVDSS+EAH+ D L+Y+E+A + PN GPY  M+CG+SCLAG
Sbjct: 239 STTLEVSVLDTLYNEKNLAIVDSSIEAHMLDLLIYRENAKLEPNQGPYEVMICGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFG FHF  P KIGDR+SF+D AGY + +KNWFNGI MP I +K  DGT+   R+F+YN
Sbjct: 299 DIFGTFHFPHPPKIGDRLSFQDAAGYTMVKKNWFNGIAMPAIVIKECDGTLTLQRQFNYN 358

Query: 361 DYYNNLS 367
           DY  +LS
Sbjct: 359 DYQESLS 365


>gi|294675763|ref|YP_003576378.1| carboxynorspermidine decarboxylase [Rhodobacter capsulatus SB 1003]
 gi|294474583|gb|ADE83971.1| carboxynorspermidine decarboxylase [Rhodobacter capsulatus SB 1003]
          Length = 364

 Score =  265 bits (677), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 197/367 (53%), Positives = 255/367 (69%), Gaps = 3/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MI TP+YLID+  LL NL     +R+ +G K LLALKCFA W  FD +  +MDGTTSSSL
Sbjct: 1   MIPTPFYLIDETALLQNLQKIDLLREASGAKALLALKCFATWSAFDIMRPHMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           YE+ LG EKFG ETHAY+VA+ D EID   +  D IIFN+V QL +F +       + G+
Sbjct: 61  YELRLGREKFGKETHAYSVAWSDREIDEACAYADKIIFNSVGQLTRFAE--PSQGIQRGV 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP  S S F LADP RPFSRLGE    K+      ++G+M H NCEN+ F  F   L 
Sbjct: 119 RLNPRFSTSGFDLADPARPFSRLGEWDVTKLLGVADLISGVMIHYNCENRDFALFDDQLG 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            IE+EF   + +++W+SLGGGIHFT + YP+++  +RLK FS+++ VQ+YLEPGEA +T 
Sbjct: 179 RIEREFAPLLEKLDWVSLGGGIHFTGEGYPLEELAKRLKTFSDRFGVQVYLEPGEASITK 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           +TTL  TVLD+ +N K L IVDSS+EAH+ D L+Y+ESA   P  G +   +CG+SCLAG
Sbjct: 239 STTLEVTVLDLLDNGKQLAIVDSSIEAHMLDLLIYRESAK-LPQEGDHAYQICGKSCLAG 297

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGE  F  P+K+GDRIS  D AGY + +KNWFNG+NMP+IA+K   G I  IREF+Y 
Sbjct: 298 DIFGEARFPAPLKVGDRISVADAAGYTMVKKNWFNGVNMPSIAIKRASGQIDLIREFTYE 357

Query: 361 DYYNNLS 367
           DY ++LS
Sbjct: 358 DYLSSLS 364


>gi|149194966|ref|ZP_01872059.1| Carboxynorspermidine decarboxylase [Caminibacter mediatlanticus
           TB-2]
 gi|149134887|gb|EDM23370.1| Carboxynorspermidine decarboxylase [Caminibacter mediatlanticus
           TB-2]
          Length = 371

 Score =  265 bits (677), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 147/372 (39%), Positives = 219/372 (58%), Gaps = 9/372 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           IKTP Y+I++ KL NNL     ++  AG K+L+ALK +A W  FD L +Y+ G T+S L+
Sbjct: 3   IKTPAYVIEEDKLENNLKILKNVQDKAGCKILVALKGYATWSTFDLLEKYLAGATASGLW 62

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L   K   E H Y+ AYKD EID +     T+IFN+ +QL +F+++ ++    IGLR
Sbjct: 63  EAKLAQMK-PWEVHTYSPAYKDDEIDEIADISHTVIFNSFNQLERFENRVKQKAL-IGLR 120

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP VS +   L DP  P+SRLG   ++   +++KNV+GL FH  CE          L+ 
Sbjct: 121 VNPGVSSAPVPLYDPCAPYSRLGITKENFKANKLKNVSGLHFHTLCEQL-DDALERTLEE 179

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV--QIYLEPGEAIVT 239
            EK +G ++  +EW++ GGG H T K Y V++  + +KEF  +Y     +YLEPGEA+  
Sbjct: 180 FEKLYGEYLKDMEWVNFGGGHHITRKGYNVENLIKMIKEFKNRYPNIKDVYLEPGEAVGL 239

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----TGPYTAMVCGR 295
           N   L   VLDI +N   + I+D+S EAH+PD L       +          YT    G 
Sbjct: 240 NAGYLIAEVLDIVDNGMKIAILDTSAEAHMPDVLAMPYRPEVRNAGKPGEKKYTYRFGGV 299

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           +CLAGD+ G++ F++ +K+GD++ FED+A Y + +   FNG+ +P+I VK  +G    +R
Sbjct: 300 TCLAGDVIGDYSFDEELKVGDKVIFEDMAIYTMVKNTAFNGVRLPSIVVKRKNGDFWKVR 359

Query: 356 EFSYNDYYNNLS 367
           EF + D+ N LS
Sbjct: 360 EFHFEDFKNRLS 371


>gi|160884393|ref|ZP_02065396.1| hypothetical protein BACOVA_02371 [Bacteroides ovatus ATCC 8483]
 gi|237718189|ref|ZP_04548670.1| carboxynorspermidine decarboxylase [Bacteroides sp. 2_2_4]
 gi|156110132|gb|EDO11877.1| hypothetical protein BACOVA_02371 [Bacteroides ovatus ATCC 8483]
 gi|229452610|gb|EEO58401.1| carboxynorspermidine decarboxylase [Bacteroides sp. 2_2_4]
          Length = 379

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 120/373 (32%), Positives = 195/373 (52%), Gaps = 9/373 (2%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+++++ L  NL     +   AGV+++LA K FA W  F    +Y+D +T+SS+YE
Sbjct: 8   PSPCYIMEEELLRKNLCLIKSVADRAGVEIILAFKSFAMWRSFPIFREYIDHSTASSVYE 67

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIGL 120
             L  E+FG + H Y+ AY + +   ++     I FN++ Q  +F     A+      G+
Sbjct: 68  ARLALEEFGSKAHTYSPAYTEQDFPEIMRCSSHITFNSMQQFERFYPMVVAEGSGISCGI 127

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP  S  +  L +P  P +R G       E+  + + G   H +CE+ S+      L+
Sbjct: 128 RVNPEYSEVETELYNPCAPGTRFGITADLLPEALPQGIEGFHCHCHCESSSYE-LERTLE 186

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239
           ++E +F H+  QI+W++LGGG   T KDY  +   + L+    +Y   +I LEPG A   
Sbjct: 187 HLEAKFAHWFPQIKWLNLGGGHLMTRKDYDTEHLIRLLQGLKARYPHLRIILEPGSAFTW 246

Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCG 294
            T  L + V+DI E+      + + S   H+PD L       +      N G Y   + G
Sbjct: 247 QTGVLTSEVVDIVESRGIKTAILNVSFTCHMPDCLEMPYQPAVRGAEMGNEGKYIYRLGG 306

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            SCL+GD  G + F+  ++IG+RI FED+  Y + + N FNGI+ P IA+   +G  +  
Sbjct: 307 NSCLSGDYMGLWSFDHELQIGERIVFEDMIHYTMVKTNMFNGIHHPAIAIWTKEGKAEIY 366

Query: 355 REFSYNDYYNNLS 367
           ++FSY DY + +S
Sbjct: 367 KQFSYEDYRDRMS 379


>gi|149204798|ref|ZP_01881761.1| putative carboxynorspermidine decarboxylase protein [Roseovarius
           sp. TM1035]
 gi|149141767|gb|EDM29820.1| putative carboxynorspermidine decarboxylase protein [Roseovarius
           sp. TM1035]
          Length = 364

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 203/367 (55%), Positives = 257/367 (70%), Gaps = 3/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MI TPYYLID+ +LL N+     +R  +G K LLALKCFA W  F T+  YMDGTTSSSL
Sbjct: 1   MIPTPYYLIDEDRLLQNMRKIERLRALSGAKALLALKCFATWSAFPTMKPYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           +E+ LG EKFG ETHAY+VA+ D EI+  +S  D IIFNTV QL ++   +Q    + GL
Sbjct: 61  FELRLGREKFGQETHAYSVAWSDAEIEEAVSYADKIIFNTVGQLQRYD--SQSAGIERGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP  S S F LADP RPFSRLGE   +KI   I  ++G+M H NCEN+ F  F   L 
Sbjct: 119 RLNPRFSTSSFDLADPARPFSRLGEWEVNKILGVIDRISGVMIHYNCENRDFDLFDQQLT 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            IE EFG  + +++W+SLGGGIHFT  DYP+++   RLK+F+EK+ VQ+YLEPGEA +T 
Sbjct: 179 RIEDEFGPVLERLQWVSLGGGIHFTGDDYPLEELAARLKQFAEKFDVQVYLEPGEAAITG 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           TTTL  TVLD+ +N K+L IVDSS EAH+ D L+Y+ESA   P  G +T  +CG+SCLAG
Sbjct: 239 TTTLEVTVLDLLDNGKDLAIVDSSTEAHMLDLLIYRESAK-LPQDGAHTYQICGKSCLAG 297

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGE  F  P+ IGDRIS  D AGY + +KNWFNG+NMP IA++  DG I  IR F++ 
Sbjct: 298 DIFGEARFAAPLSIGDRISIGDAAGYTMVKKNWFNGVNMPAIAIRRADGRIDVIRSFTFE 357

Query: 361 DYYNNLS 367
           D+  +LS
Sbjct: 358 DFAASLS 364


>gi|332710990|ref|ZP_08430926.1| carboxynorspermidine decarboxylase [Lyngbya majuscula 3L]
 gi|332350304|gb|EGJ29908.1| carboxynorspermidine decarboxylase [Lyngbya majuscula 3L]
          Length = 379

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 142/374 (37%), Positives = 210/374 (56%), Gaps = 9/374 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I +P Y+++ +KL+ NL+    ++K AG+ ++LALK FA +  F  + QY+ GTT+SSL+
Sbjct: 7   IPSPCYVLESEKLIENLELIDSVQKKAGITIILALKGFAMFSAFPIVKQYLQGTTASSLF 66

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LG E+FGGE H Y +AY++ E   ++     I FN++SQ  +FK+K        GLR
Sbjct: 67  EARLGREEFGGELHLYLLAYQEKEFPELIQGATHISFNSLSQWERFKEKTLLTQVSPGLR 126

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP  S  +  + +P+ P SRLG + +   +   + + GL  HN CE+ S    +  L+ 
Sbjct: 127 INPEYSPVEPEIYNPSSPLSRLGIRAEKLGDKLPEGIEGLHCHNLCESDS-QALARTLEQ 185

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240
           IE  FGH + QI+W++LGGG   T K Y ++   + L  F  +Y    IYLEPG A+   
Sbjct: 186 IETLFGHHLPQIKWLNLGGGHLITSKSYDIEHLIEVLTRFKSRYPHLHIYLEPGSAVAWE 245

Query: 241 TTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGR 295
           T  L  TVLD I  +   + ++D S  AH+PD L       I     P        + G 
Sbjct: 246 TGVLRATVLDLIETSNLIIAMLDVSFTAHMPDCLEMPYKPRIRGARDPQQKEPRYRMGGL 305

Query: 296 SCLAGDI--FGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353
           +CLAGD    G+++FE P+++GD I FED+  Y + + + FNGI  P I +   DGT   
Sbjct: 306 TCLAGDFMGMGDYYFETPLQVGDTIVFEDMIHYTMVKTSMFNGIKHPAIGIVRSDGTFNL 365

Query: 354 IREFSYNDYYNNLS 367
           +REF Y DY + LS
Sbjct: 366 VREFGYEDYKSRLS 379


>gi|332668239|ref|YP_004451027.1| carboxynorspermidine decarboxylase [Haliscomenobacter hydrossis DSM
           1100]
 gi|332337053|gb|AEE54154.1| carboxynorspermidine decarboxylase [Haliscomenobacter hydrossis DSM
           1100]
          Length = 379

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 122/374 (32%), Positives = 205/374 (54%), Gaps = 9/374 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P Y++D+ +L  NL+   ++++ +G  ++LALK F+ W +F  + QY+ G T+SSL+
Sbjct: 7   VPSPAYVLDEARLRRNLELIQHVQQESGASVILALKGFSMWRVFPMVKQYLAGATASSLH 66

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IG 119
           E  L  E+ G   H Y+ AY   + + V+     I FN+++Q  +++++ Q+  +    G
Sbjct: 67  EARLIFEEMGVPAHTYSPAYLPAQFEEVMGYSSHITFNSIAQYARYREQLQQAKQSISPG 126

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           LR+NP  S  +  L +P+ P SRLGE  ++      + + GL  H  CE+ S      ++
Sbjct: 127 LRVNPEFSVVETDLYNPSAPGSRLGEMVENLGGKLPEGIEGLHIHTLCES-SAEDLENLI 185

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238
           K++E+ FG F  Q++WI+ GGG   T + Y V+   + L+ F  ++   ++ LEPG AI 
Sbjct: 186 KSVEQRFGAFFPQLQWINFGGGHLMTRQGYDVERLIKVLQAFRARHPQLEVILEPGSAIA 245

Query: 239 TNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIY----PNTGPYTAMVC 293
             T  L TTVLD+  +      + D S  AH+PD L       +     P  G  T  + 
Sbjct: 246 WETGELVTTVLDVINSRGIKTAILDVSFTAHMPDTLEMPYRPKVLGATDPVDGKPTYRLG 305

Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353
           G SCLAGD   E+ FE+ +K GDR+   D+  Y + +   FNG+  P I + + D T++ 
Sbjct: 306 GSSCLAGDFMTEYSFEQELKPGDRLVLWDMIHYTMVKTTTFNGVKHPDICIWHEDDTLEV 365

Query: 354 IREFSYNDYYNNLS 367
           ++++ Y D+ N LS
Sbjct: 366 VKKYEYEDFRNRLS 379


>gi|295083988|emb|CBK65511.1| carboxynorspermidine decarboxylase [Bacteroides xylanisolvens XB1A]
          Length = 379

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 117/373 (31%), Positives = 192/373 (51%), Gaps = 9/373 (2%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+++++ L  NL     +   AGV+++LA K FA W  F    +Y+D +T+SS+YE
Sbjct: 8   PSPCYIMEEELLRKNLCLIKNVADRAGVEIILAFKSFAMWRSFPIFREYIDHSTASSVYE 67

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIGL 120
             L  E+FG + H Y+ AY + +   ++     I FN++ Q  +F     A+      G+
Sbjct: 68  ARLALEEFGSKAHTYSPAYTEQDFPEIMRCSSHITFNSMQQFERFYPMVVAEGSGISCGI 127

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP  S  +  L +P  P +R G       ++  + + G   H +CE+ S+      L+
Sbjct: 128 RVNPEYSEVETELYNPCAPGTRFGITADLLPDALPQGIEGFHCHCHCESSSYE-LERTLE 186

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239
           ++E +F  +  QI+W++LGGG   T K Y  +     L+    ++   +I LEPG A   
Sbjct: 187 HLEAKFSRWFPQIKWLNLGGGHLMTRKGYDTEHLITLLQGLKARHPHLRIILEPGSAFTW 246

Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCG 294
            T  L + V+DI E+      + + S   H+PD L       +      N G Y   + G
Sbjct: 247 QTGVLTSEVVDIVESRGIKTAILNVSFTCHMPDCLEMPYQPAVRGAEMGNEGKYIYRLGG 306

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            SCL+GD  G + F+ P++IG+RI FED+  Y + + N FNGI+ P IA+   +G  +  
Sbjct: 307 NSCLSGDYMGLWSFDHPLQIGERIVFEDMIHYTMVKTNMFNGIHHPAIAIWTKEGKAEIY 366

Query: 355 REFSYNDYYNNLS 367
           ++FSY DY   +S
Sbjct: 367 KQFSYEDYRGRMS 379


>gi|315121904|ref|YP_004062393.1| carboxynorspermidine decarboxylase [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495306|gb|ADR51905.1| carboxynorspermidine decarboxylase [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 367

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 299/367 (81%), Positives = 334/367 (91%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MIKTPYYLIDKQK+LNNL+    I+KNAG+KLLLALKCF+AWG+FD L+QYMDGTTSSSL
Sbjct: 1   MIKTPYYLIDKQKILNNLEIVQRIQKNAGIKLLLALKCFSAWGVFDILSQYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           YEVMLG +KFGGETHAYNVAYKDCEID VL++CDTIIFN +SQLNKFK+KAQK  K IGL
Sbjct: 61  YEVMLGRKKFGGETHAYNVAYKDCEIDVVLAHCDTIIFNNISQLNKFKEKAQKSKKNIGL 120

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           RINPS+SYS FILADPNRPFSRLGEK K+KI  EIKN+NGLMFHNNCENKSF CF AML 
Sbjct: 121 RINPSISYSNFILADPNRPFSRLGEKDKNKIADEIKNINGLMFHNNCENKSFPCFDAMLN 180

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
           +IE+EFG+FI Q+EWISLGGGIHFTD  YP++DFC+RLKEFSEKYS+QIYLEPGEAIVTN
Sbjct: 181 HIEQEFGNFIFQVEWISLGGGIHFTDNTYPIEDFCRRLKEFSEKYSIQIYLEPGEAIVTN 240

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           TTTL TTVLDI++NIKNLVIVDSSVEAH+PD LLY++SA I PN GPYTAMVCGRSCLAG
Sbjct: 241 TTTLETTVLDIAQNIKNLVIVDSSVEAHLPDCLLYKQSAIISPNKGPYTAMVCGRSCLAG 300

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFG+FHFE P +IGDRISFEDVAGYN+NRKNWFNGINMP I  K++DGT+K IREFSY+
Sbjct: 301 DIFGDFHFETPPQIGDRISFEDVAGYNLNRKNWFNGINMPMIVAKDLDGTLKIIREFSYD 360

Query: 361 DYYNNLS 367
           DYY NLS
Sbjct: 361 DYYKNLS 367


>gi|326565772|gb|EGE15934.1| carboxynorspermidine decarboxylase [Moraxella catarrhalis BC1]
          Length = 400

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 185/382 (48%), Positives = 249/382 (65%), Gaps = 16/382 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TPYYL+D++ +++NL     +   +GVK LLALKCFA WG+F+++  Y+ GTTSSSL 
Sbjct: 19  IQTPYYLLDERAIIDNLSITQKVCHESGVKALLALKCFATWGVFESMKPYLHGTTSSSLK 78

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG E FGGETHAY+VAY D EI  VL  CD IIFN+++QL +F   A   +  +GLR
Sbjct: 79  EVRLGKEYFGGETHAYSVAYADHEIKEVLDYCDKIIFNSINQLKRFGQLAHDKNIPVGLR 138

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP  S S FI+ADP RPFSRLGE   + I +    + G+M HNNCEN  F  FS  L +
Sbjct: 139 LNPQTSNSSFIIADPARPFSRLGEHDVESIMAIADQITGVMIHNNCENTDFEAFSQSLTD 198

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           IE  FG    ++EWIS GGGIH+ D++YP+  F  RLK FSE Y VQIYLEPGEA V   
Sbjct: 199 IENRFGELFHRLEWISFGGGIHYIDQNYPLDKFINRLKNFSETYGVQIYLEPGEASVHQG 258

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG--------------- 286
             L T+VLD+  N K L +VD+S+EAH+ D L+Y++S+ +                    
Sbjct: 259 AVLVTSVLDVMYNNKPLAVVDASIEAHMLDLLIYRQSSPLAYVNETTYDITGADFDGTSA 318

Query: 287 -PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
              +  + G+SCLAGDIFG++   +P+KIGD+++F + A Y + +KNWFNG++MP+I + 
Sbjct: 319 DETSVRIYGKSCLAGDIFGDYTLNEPLKIGDKVAFGNAAAYTMVKKNWFNGVDMPSIVII 378

Query: 346 NVDGTIKAIREFSYNDYYNNLS 367
             DG I   R+F Y DY  +LS
Sbjct: 379 RQDGEIMIQRQFDYEDYKASLS 400


>gi|260174601|ref|ZP_05761013.1| carboxynorspermidine decarboxylase [Bacteroides sp. D2]
 gi|315922865|ref|ZP_07919105.1| carboxynorspermidine decarboxylase [Bacteroides sp. D2]
 gi|313696740|gb|EFS33575.1| carboxynorspermidine decarboxylase [Bacteroides sp. D2]
          Length = 379

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 120/373 (32%), Positives = 195/373 (52%), Gaps = 9/373 (2%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+++++ L  NL     +   AGV+++LA K FA W  F    +Y+D +T+SS+YE
Sbjct: 8   PSPCYIMEEELLRKNLCLIKSVADRAGVEIILAFKSFAMWRSFPIFREYIDHSTASSVYE 67

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIGL 120
             L  E+FG + H Y+ AY + +   ++     I FN++ Q  +F     A+      G+
Sbjct: 68  ARLALEEFGSKAHTYSPAYTEQDFPEIMRCSSHITFNSMQQFERFYPMVVAEGSGISCGI 127

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP  S  +  L +P  P +R G       E+  + + G   H +CE+ S+      L+
Sbjct: 128 RVNPEYSEVETELYNPCAPGTRFGITTDLLPEALPQGIEGFHCHCHCESSSYE-LERTLE 186

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239
           ++E +F H+  QI+W++LGGG   T KDY  +   + L+    +Y   +I LEPG A   
Sbjct: 187 HLEAKFAHWFPQIKWLNLGGGHLMTRKDYDTEHLIRLLQGLKARYPHLRIILEPGSAFTW 246

Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCG 294
            T  L + V+DI E+      + + S   H+PD L       +      N G Y   + G
Sbjct: 247 QTGVLTSEVVDIVESRGIKTAILNVSFTCHMPDCLEMPYQPAVRGAEMGNEGKYIYRLGG 306

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            SCL+GD  G + F+  ++IG+RI FED+  Y + + N FNGI+ P IA+   +G  +  
Sbjct: 307 NSCLSGDYMGLWSFDHELQIGERIVFEDMIHYTMVKTNMFNGIHHPAIAIWTKEGKAEIY 366

Query: 355 REFSYNDYYNNLS 367
           ++FSY DY + +S
Sbjct: 367 KQFSYEDYRDRMS 379


>gi|163745757|ref|ZP_02153117.1| carboxynorspermidine decarboxylase [Oceanibulbus indolifex HEL-45]
 gi|161382575|gb|EDQ06984.1| carboxynorspermidine decarboxylase [Oceanibulbus indolifex HEL-45]
          Length = 364

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 209/366 (57%), Positives = 266/366 (72%), Gaps = 2/366 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TPYYLIDK  L +N++    +R  +G + LLALKCFA W +FD +++YMDG+TSSSLY
Sbjct: 1   MQTPYYLIDKANLRDNMEKIARLRALSGARCLLALKCFATWSVFDFMSEYMDGSTSSSLY 60

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG EKF GETHAY+VAY D EID VL + D IIFN++ QL+KF    Q      GLR
Sbjct: 61  EVRLGAEKFPGETHAYSVAYADHEIDEVLGHADKIIFNSIGQLDKFDT--QSSGHIRGLR 118

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
            NP VS S+F LADP RPFSRLGE   ++I++    ++GLMFHNNCEN SF  F  ML  
Sbjct: 119 ANPGVSTSEFDLADPARPFSRLGEHDPEEIDAVADRISGLMFHNNCENDSFERFDEMLTL 178

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           IE  FG  + +++WISLGGGIHFT  DYP+ D   RLK F+E + VQ+YLEPGEA +T  
Sbjct: 179 IEDRFGAVLHKMDWISLGGGIHFTGADYPLDDLALRLKAFAEAFGVQVYLEPGEAAITGA 238

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGD 301
            TL  TVLD   N KNL IVDSS+EAH+ D L+Y+E A I PNTG +  M+CG+SCLAGD
Sbjct: 239 ATLEVTVLDTMHNGKNLAIVDSSIEAHMLDLLIYREPAKIAPNTGDHEWMICGKSCLAGD 298

Query: 302 IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361
           IFGEF F+ P+K GDR+SF+D AGY + +KNWFNG+ MP+IA++ +DGT + +R+F Y+D
Sbjct: 299 IFGEFRFDAPLKAGDRLSFQDAAGYTMVKKNWFNGVKMPSIAIRELDGTTRMVRDFDYDD 358

Query: 362 YYNNLS 367
           +   LS
Sbjct: 359 FAAALS 364


>gi|149198544|ref|ZP_01875588.1| hypothetical protein LNTAR_18515 [Lentisphaera araneosa HTCC2155]
 gi|149138259|gb|EDM26668.1| hypothetical protein LNTAR_18515 [Lentisphaera araneosa HTCC2155]
          Length = 389

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 130/369 (35%), Positives = 206/369 (55%), Gaps = 8/369 (2%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           ++P Y+ID+Q L  NL+    I+     K+LLALK F+ +  F  + +Y+DG  +SSL+E
Sbjct: 24  ESPAYIIDEQALERNLEILKEIKDKTDCKILLALKAFSNYKTFPLIKKYLDGCCASSLWE 83

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
             L +E+FG E H Y+ +Y+  E++ + S  + IIFN+V +L ++  KA     ++GLRI
Sbjct: 84  AQLAYEEFGKEVHTYSPSYRSDELNQISSYSNHIIFNSVQELKRY--KASLKGTELGLRI 141

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           NP  S +   L +P   FSRLG K  D    +I  ++G   H  C+ K        L   
Sbjct: 142 NPEHSETDVELYNPCSKFSRLGAKLADLEGLDIDAISGFHLHTLCQ-KGADALERTLAVF 200

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTT 242
           E++F  F+ +++W++LGGG H T   Y      + + +   KY +Q+YLEPGEA+  NT 
Sbjct: 201 EEKFHKFLPKLKWLNLGGGHHITQVGYDKDLLMRLINKLKTKYDLQVYLEPGEAVAINTG 260

Query: 243 TLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRSC 297
           +L  TVLD  E+   +  IVD S   H+PD L       I          ++  + G SC
Sbjct: 261 SLLCTVLDTFESAGIHHAIVDISATCHMPDVLEMPYRPDIRGAGEEGQKKFSYRLGGTSC 320

Query: 298 LAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF 357
           LAGD  G + FE+ +K GDR+ F+D++ Y + + ++FNG+  P+I +K+       +++F
Sbjct: 321 LAGDSIGIYSFEEELKRGDRLLFDDMSHYTMVKTSFFNGVRHPSIYLKDKSRRDVLLKKF 380

Query: 358 SYNDYYNNL 366
           +Y DY + L
Sbjct: 381 TYEDYRSKL 389


>gi|46578835|ref|YP_009643.1| carboxynorspermidine decarboxylase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46448247|gb|AAS94902.1| carboxynorspermidine decarboxylase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311232698|gb|ADP85552.1| carboxynorspermidine decarboxylase [Desulfovibrio vulgaris RCH1]
          Length = 390

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 122/376 (32%), Positives = 209/376 (55%), Gaps = 12/376 (3%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQY----MDGTTSS 58
            +P ++ID+ +L+ N      +++  G ++LLALK FAAW  F  L++     + GT +S
Sbjct: 16  PSPCFVIDEDRLVANAAILDEVQRRTGARVLLALKGFAAWSTFPLLSRAQGGVLHGTCAS 75

Query: 59  SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHK 116
           S +E  LG E FGGE HA+   Y + ++  +++  D I+FN+ +Q  +++    A   H 
Sbjct: 76  SPHEARLGRETFGGEVHAFAAGYSEDDMAELVTIADHIVFNSFAQWRRYRPVVEASGRHI 135

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
           + G+R+NP  S     + +P  P SRLG + +      ++ + GL FH  CE       S
Sbjct: 136 ECGIRVNPEHSEGAVAIYNPCSPGSRLGVRERHFEPQSLEGITGLHFHTLCEQD-AGALS 194

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
             L   E +FG ++  + W++ GGG H T + Y +   C+ ++   ++Y VQ+Y+EPGEA
Sbjct: 195 RTLDAFESKFGRYLEGMRWVNFGGGHHITREGYDLDLLCRCIERIRDRYGVQVYIEPGEA 254

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMV 292
           +  +   L  +VLD+ +    +VI+D+S  AH+PD L             P+   +T  +
Sbjct: 255 VALDAGVLLCSVLDVVQADVPVVILDTSAAAHMPDVLEMPYRPGCIGSGLPDEKAWTCRL 314

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTI 351
            G+SCLAGD+ G++ F++P++ GDR++F D+A Y++ +   FNG+ +P IA+     G  
Sbjct: 315 AGKSCLAGDVVGDYSFDRPLRPGDRLAFLDMAIYSMVKTTTFNGLQLPAIALYRASSGKR 374

Query: 352 KAIREFSYNDYYNNLS 367
           + +R F Y  + + LS
Sbjct: 375 EVVRTFGYETFRDRLS 390


>gi|225377633|ref|ZP_03754854.1| hypothetical protein ROSEINA2194_03284 [Roseburia inulinivorans DSM
           16841]
 gi|225210497|gb|EEG92851.1| hypothetical protein ROSEINA2194_03284 [Roseburia inulinivorans DSM
           16841]
          Length = 377

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 138/375 (36%), Positives = 211/375 (56%), Gaps = 12/375 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTP Y+ID+++L  NL     + K+ G K+LLA K F+ +  +  + QY+ GTT+S L+
Sbjct: 6   LKTPCYVIDEKQLKKNLSILQKVEKDTGCKILLAQKAFSCFYEYPLIGQYISGTTASGLF 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LG E+ G E H +  AYK+ ++  ++  CD ++FN+ SQL K+K+        +G+R
Sbjct: 66  EARLGKEEMGKENHVFAPAYKEEDVKELVKICDHMVFNSFSQLEKYKNFC--KETSVGIR 123

Query: 122 INPSVSYSK-FILADPNRPFSRLGEKC----KDKIESEIKNVNGLMFHNNCENKSFLCFS 176
           INP  S      + DP    SRLG       +   +     V+GL FH  CE  +    +
Sbjct: 124 INPECSTQGDHAIYDPCAKGSRLGVTIAHFKEQFTDEMYDYVDGLHFHTLCEQNADD-LA 182

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
             L+ +E++FG ++ +++W++ GGG H T  DY +    + +    EKY + IYLEPGEA
Sbjct: 183 KTLEAVEEKFGSYLYKMKWLNFGGGHHITRADYDIGLLEKCILHMKEKYDLDIYLEPGEA 242

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMV 292
           I  N   L TTV+D+ +N    +I+D+S   H+PD L       +     P    YT  +
Sbjct: 243 IALNAGYLATTVMDVVDNDIQTLILDASAACHMPDVLEMPYRPPLRSSGMPEEKKYTYRL 302

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352
              +CLAGDI G++ F++  K+ DR+ FED+A Y++ + N FNGI +P IAV +  G  K
Sbjct: 303 SSYTCLAGDIIGDYSFDEEKKVDDRLYFEDMAIYSMVKNNTFNGIPLPDIAVMDESGECK 362

Query: 353 AIREFSYNDYYNNLS 367
            IR FSY D+   LS
Sbjct: 363 VIRSFSYEDFKGRLS 377


>gi|332305132|ref|YP_004432983.1| carboxynorspermidine decarboxylase [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332172461|gb|AEE21715.1| carboxynorspermidine decarboxylase [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 379

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 127/371 (34%), Positives = 202/371 (54%), Gaps = 6/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I +P Y+ ++ KL  NL     +++ +GV+++LALK F+ W  FD + QY+ G+T+S+++
Sbjct: 10  IPSPCYVCEEAKLEANLQLMQRVQQESGVEIILALKGFSMWSTFDLVKQYLQGSTASAVW 69

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LG E+ G + HA++ AYK  +ID ++   D I FN+  Q N++K +    +   G+R
Sbjct: 70  EARLGKEEIGKQVHAFSPAYKPADIDQLVDLVDHISFNSFGQWNRYKSQILASNVSPGIR 129

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +N     ++  L DP+ P SR G   KD  ++++  + G   HN CE  SF     +L  
Sbjct: 130 LNAQHREAETELYDPSAPGSRFGILAKDLKDADLSGLEGFHIHNLCECDSFATERTILAV 189

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240
            E +FG +  QI+WI+ GGG   T + Y V+     L+ F  ++    + LEPG A+   
Sbjct: 190 EE-KFGQYFGQIKWINFGGGHLMTKEGYDVEHLITTLRAFKARHPHLNVILEPGSAVAWQ 248

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296
           T  L   V+DI EN   + IVD S  AH+PD L       +      N   +T    G S
Sbjct: 249 TGPLICEVIDIVENRDKIAIVDMSATAHMPDVLEMPYRPEVRGAGKANEKAFTYRFGGNS 308

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CL GD    + F+  ++IG+RI FED+  Y + +  +FNG+  P+I +   +G  + +R+
Sbjct: 309 CLTGDAIDLYSFDHELQIGERIIFEDMIHYTMVKTTFFNGVEHPSIGILRKNGEFELVRK 368

Query: 357 FSYNDYYNNLS 367
           F Y D+ N LS
Sbjct: 369 FEYEDFKNKLS 379


>gi|120603558|ref|YP_967958.1| carboxynorspermidine decarboxylase [Desulfovibrio vulgaris DP4]
 gi|120563787|gb|ABM29531.1| carboxynorspermidine decarboxylase [Desulfovibrio vulgaris DP4]
          Length = 390

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 121/376 (32%), Positives = 208/376 (55%), Gaps = 12/376 (3%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQY----MDGTTSS 58
            +P ++ID+ +L+ N      +++  G ++LLALK FAAW  F  L++     + GT +S
Sbjct: 16  PSPCFVIDEDRLVANAAILDEVQRRTGARVLLALKGFAAWSTFPLLSRAQGGVLHGTCAS 75

Query: 59  SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHK 116
           S +E  LG E FGGE HA+   Y + ++  +++  D I+FN+ +Q  +++    A   H 
Sbjct: 76  SPHEARLGRETFGGEVHAFAAGYSEDDMAELVTIADHIVFNSFAQWRRYRPVVEASGRHI 135

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
           + G+R+NP  S     + +P  P SRLG + +      ++ + GL FH  CE        
Sbjct: 136 ECGIRVNPEHSEGAVAIYNPCSPGSRLGVRERHFEAESLEGITGLHFHTLCEQD-AGALE 194

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
             L   E +FG ++  + W++ GGG H T + Y +   C+ ++   ++Y VQ+Y+EPGEA
Sbjct: 195 RTLDAFESKFGRYLEGMRWVNFGGGHHITREGYDLDLLCRCIERIRDRYGVQVYIEPGEA 254

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMV 292
           +  +   L  +VLD+ +    +VI+D+S  AH+PD L             P+   +T  +
Sbjct: 255 VALDAGVLLCSVLDVVQADVPVVILDTSAAAHMPDVLEMPYRPGCIGSGLPDEKAWTCRL 314

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTI 351
            G+SCLAGD+ G++ F++P++ GDR++F D+A Y++ +   FNG+ +P IA+     G  
Sbjct: 315 AGKSCLAGDVVGDYSFDRPLRPGDRLAFLDMAIYSMVKTTTFNGLQLPAIALYRASSGKR 374

Query: 352 KAIREFSYNDYYNNLS 367
           + +R F Y  + + LS
Sbjct: 375 EVVRTFGYETFRDRLS 390


>gi|332991869|gb|AEF01924.1| carboxynorspermidine decarboxylase [Alteromonas sp. SN2]
          Length = 376

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 128/371 (34%), Positives = 202/371 (54%), Gaps = 9/371 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I +P Y+++++KL+ NL+    ++  +GV+++LALK F+ W  FD +  Y+ G T+SS++
Sbjct: 10  IPSPCYVLEEEKLIRNLELMKRVQDESGVRIILALKGFSMWSSFDIIKPYLHGATASSVW 69

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L   + G E HAY+ AYK  +I+ + +  + + FN++SQ      K       +GLR
Sbjct: 70  EAKLA-AEMGKEVHAYSPAYKKADIEELATLVNHLSFNSLSQWQ--THKDALAGVSLGLR 126

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP    +   L DP  P SRLG +  +     +  ++G   HN CE  SF      LK 
Sbjct: 127 INPEHQEADTPLYDPAAPGSRLGLRVSELEGVGLSGIDGFHCHNLCECDSFATERT-LKA 185

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240
           IE  FG ++ Q++W++LGGG   T + Y V    + L +F ++Y    + LEPG A+   
Sbjct: 186 IEARFGDYLGQLKWLNLGGGHLMTSEGYDVDHLIKTLSDFKQRYPHLDVILEPGSAVAWQ 245

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----TGPYTAMVCGRS 296
           T  L   V+D+  N  ++ I+D S  AH+PD L      TI          Y   + G S
Sbjct: 246 TGPLIAEVVDVVNNDGDIAILDISATAHMPDVLEMPYRPTILNAALPGEKAYDYRLGGNS 305

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CLAGD+   + F+ P+K GDR+ FED+  Y + + ++FNG+  P I +   +G  + +R+
Sbjct: 306 CLAGDVIDTYSFDAPLKAGDRVQFEDMMHYTMVKTSFFNGVEHPAIGILRKNGEFEIVRQ 365

Query: 357 FSYNDYYNNLS 367
           FSY D+   LS
Sbjct: 366 FSYEDFKGRLS 376


>gi|326565412|gb|EGE15589.1| carboxynorspermidine decarboxylase [Moraxella catarrhalis 103P14B1]
 gi|326573400|gb|EGE23368.1| carboxynorspermidine decarboxylase [Moraxella catarrhalis 101P30B1]
          Length = 400

 Score =  263 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 185/382 (48%), Positives = 249/382 (65%), Gaps = 16/382 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TPYYL+D++ +++NL     +   +GVK LLALKCFA WG+F+++  Y+ GTTSSSL 
Sbjct: 19  IQTPYYLLDERAIIDNLSITQKVCHESGVKALLALKCFATWGVFESMKPYLHGTTSSSLK 78

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG E FGGETHAY+VAY D EI  VL  CD IIFN+++QL +F   A   +  +GLR
Sbjct: 79  EVRLGKECFGGETHAYSVAYADHEIKEVLDYCDKIIFNSINQLKRFGQLAHDKNIPVGLR 138

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP  S S FI+ADP RPFSRLGE   + I +    + G+M HNNCEN  F  FS  L +
Sbjct: 139 LNPQTSNSSFIIADPARPFSRLGEHDVESIMAIADQITGVMIHNNCENTDFEAFSQSLTD 198

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           IE  FG    ++EWIS GGGIH+ D++YP+  F  RLK FSE Y VQIYLEPGEA V   
Sbjct: 199 IENRFGELFHRLEWISFGGGIHYIDQNYPLDKFINRLKNFSETYGVQIYLEPGEASVHQG 258

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT---------------- 285
             L T+VLD+  N K L +VD+S+EAH+ D L+Y++S+ +                    
Sbjct: 259 AVLVTSVLDVMYNNKPLAVVDASIEAHMLDLLIYRQSSPLAYVNDTAYDITGADFDGTSA 318

Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
              +  + G+SCLAGDIFG++   +P+KIGD+++F + A Y + +KNWFNG++MP+I + 
Sbjct: 319 DETSVRIYGKSCLAGDIFGDYTLNEPLKIGDKVAFGNAAAYTMVKKNWFNGVDMPSIVII 378

Query: 346 NVDGTIKAIREFSYNDYYNNLS 367
             DG I   R+F Y DY  +LS
Sbjct: 379 RQDGKIMIQRQFDYEDYKASLS 400


>gi|78355620|ref|YP_387069.1| carboxynorspermidine decarboxylase [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78218025|gb|ABB37374.1| carboxynorspermidine decarboxylase [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
          Length = 391

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 125/379 (32%), Positives = 202/379 (53%), Gaps = 14/379 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P +++D+  L  NL     +++  G ++LLALK FA + +F  L   + G  +SS +
Sbjct: 14  VPSPCFVVDEGLLSRNLAVLDTVQQRTGARILLALKGFAMFSVFPLLRTVLHGACASSPH 73

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIG 119
           E  L  E+FG E H +  AY D ++  +L + D ++FN+ +QL +F+    A   H  +G
Sbjct: 74  EARLAREEFGREVHVFAAAYSDDDMQDILRHADHVVFNSFAQLERFRPAVQACPRHVSMG 133

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCENKSFL 173
           +R+NP  S     + DP    SRLG + ++   +  +       V GL FH  C++    
Sbjct: 134 IRVNPEHSEGAVPIYDPCSDGSRLGVRLREFEAALERDSGALDGVEGLHFHTLCQHN-AD 192

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
                L  +EK+FG ++  ++W+++GGG H T  DY V   C+        Y VQ+YLEP
Sbjct: 193 ALERTLAEVEKKFGRWMHGMQWVNMGGGHHITRSDYDVDTLCRCAAHVRRTYGVQVYLEP 252

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYT 289
           GEA+  +T  L  TVLD+ +    + I+D+S   H+PD L       +          Y+
Sbjct: 253 GEAVALDTGILVATVLDVVQADMPVAILDASAACHMPDVLEMPYRPHVIGSGLQGEKAYS 312

Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349
               G+SCLAGD+ GE+ F++P++ GDR++F D+A Y++ + N FNG+ +P IA      
Sbjct: 313 YRFAGKSCLAGDVIGEYSFDEPLRAGDRVAFTDMAIYSMVKTNTFNGLQLPAIARYRPAT 372

Query: 350 TIKAI-REFSYNDYYNNLS 367
               + R F Y D+ N LS
Sbjct: 373 DEILVERTFGYEDFRNRLS 391


>gi|293373794|ref|ZP_06620138.1| carboxynorspermidine decarboxylase [Bacteroides ovatus SD CMC 3f]
 gi|292631193|gb|EFF49827.1| carboxynorspermidine decarboxylase [Bacteroides ovatus SD CMC 3f]
          Length = 379

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 118/373 (31%), Positives = 194/373 (52%), Gaps = 9/373 (2%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+++++ L  NL     +   AGV+++LA K FA W  F    +Y++ +T+SS+YE
Sbjct: 8   PSPCYIMEEELLRKNLSLIKSVADRAGVEIILAFKSFAMWRSFPIFREYINHSTASSVYE 67

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIGL 120
             L  E+FG + H Y+ AY + +   ++     I FN++ Q  +F     A+      G+
Sbjct: 68  ARLALEEFGSKAHTYSPAYTEQDFPEIMRCSSHITFNSMQQFERFYPMVVAEGSGISCGI 127

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP  S  +  L +P  P +R G       +   + + G   H +CE+ S+      L+
Sbjct: 128 RVNPEYSEVETELYNPCAPGTRFGITADLLPDVLPQGIEGFHCHCHCESSSYE-LERTLE 186

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239
           ++E +F H+  QI+W++LGGG   T KDY  +   + L+    +Y   +I LEPG A   
Sbjct: 187 HLEAKFAHWFPQIKWLNLGGGHLMTRKDYDTEHLIRLLQGLKARYPHLRIILEPGSAFTW 246

Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCG 294
            T  L + V+DI E+      + + S   H+PD L       +      N G Y   + G
Sbjct: 247 QTGVLTSEVVDIVESRGIKTAILNVSFTCHMPDCLEMPYQPAVRGAEMGNEGKYIYRLGG 306

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            SCL+GD  G + F+  ++IG+RI FED+  Y + + N FNGI+ P IA+   +G  +  
Sbjct: 307 NSCLSGDYMGLWSFDHELQIGERIVFEDMIHYTMVKTNMFNGIHHPAIAIWTKEGKAEIY 366

Query: 355 REFSYNDYYNNLS 367
           ++FSY DY + +S
Sbjct: 367 KQFSYEDYRDRMS 379


>gi|152993160|ref|YP_001358881.1| carboxynorspermidine decarboxylase [Sulfurovum sp. NBC37-1]
 gi|151425021|dbj|BAF72524.1| carboxynorspermidine decarboxylase [Sulfurovum sp. NBC37-1]
          Length = 379

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 144/372 (38%), Positives = 223/372 (59%), Gaps = 7/372 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I +P +L+ ++KL+NNL+    I++ +G K+LLALK +A W  F  + QY+DG  +S L+
Sbjct: 9   IPSPCWLLKEKKLVNNLELLQSIKEKSGAKILLALKGYALWKSFPLIRQYLDGCCASGLH 68

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ--KLHKKIG 119
           E ML  E+FG E H Y  A+K+ EID + S    ++FN+ +Q  +F  +A+       +G
Sbjct: 69  EAMLAQEEFGKEVHTYAPAFKEKEIDKIASLSQHLVFNSPAQFKRFAAQARETNPSLSLG 128

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           LRINP  S S   + +P   +SRLG   ++  ES ++  +GL FH  CE  S      +L
Sbjct: 129 LRINPEYSESPKEIYNPCGLYSRLGTTKENFDESIVEICDGLHFHALCEQDS-SSLEKVL 187

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
           ++ E  FG +I +++WI+ GGG H T K Y ++     +++F  +Y V++YLEPGEA+  
Sbjct: 188 QHFETNFGAYIPKMKWINFGGGHHITRKGYDIERLVTLIRDFKARYDVEVYLEPGEAVAW 247

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGR 295
            T  L  TVLDI  N  ++ I+D+S E H+PD ++    A +          +T  + G 
Sbjct: 248 ETGPLIATVLDIVHNGIDIAILDTSAETHMPDTIIMPYRAEVRGAGKVGEKKHTYRLAGN 307

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           +CLAGDI G++ F+ P+KIGDR+ FED   Y + +   FNGI +P IA++ +DG I+ +R
Sbjct: 308 TCLAGDIMGDYSFDAPLKIGDRVFFEDQMHYTMVKATTFNGIKLPAIAIERLDGEIEVVR 367

Query: 356 EFSYNDYYNNLS 367
           EF Y D+ + LS
Sbjct: 368 EFGYGDFKSRLS 379


>gi|53713816|ref|YP_099808.1| carboxynorspermidine decarboxylase [Bacteroides fragilis YCH46]
 gi|52216681|dbj|BAD49274.1| carboxynorspermidine decarboxylase [Bacteroides fragilis YCH46]
          Length = 379

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 119/373 (31%), Positives = 196/373 (52%), Gaps = 9/373 (2%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+++++ L  NL     +  +AGV+++LA K FA W  F    +Y+  +T+SS+YE
Sbjct: 8   PSPCYIMEEELLRKNLSLIKSVADDAGVEIILAFKSFAMWRSFPIFREYIGHSTASSVYE 67

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGL 120
             L  E+FG + H Y+ AY + +   ++     I FN++SQ ++F     A+      G+
Sbjct: 68  ARLALEEFGSKAHTYSPAYTEADFPEIMRCSSHITFNSLSQFSRFYPLTVAEGSGISCGI 127

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP  S  +  L +P  P +R G           + + G   H +CE+ SF      L+
Sbjct: 128 RVNPEYSEVETELYNPCAPGTRFGITADLLPARLPQGIEGFHCHCHCESSSFE-LERTLQ 186

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239
           ++E++F  + +QI+W++LGGG   T KDY  +     L+   ++Y   +I LEPG A   
Sbjct: 187 HLEEKFSPWFSQIKWLNLGGGHLMTRKDYDTRHLTGLLQGLKKRYPHLRIILEPGSAFTW 246

Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCG 294
            T  L + V+DI E+      + + S   H+PD L      ++        GP+   + G
Sbjct: 247 QTGVLTSEVVDIVESRGIRTAILNVSFTCHMPDCLEMPYQPSVRGAVMGEEGPFVYRLGG 306

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            SCL+GD  G + F+  ++ G+RI FED+  Y + + N FNGI+ P IA+   DG  +  
Sbjct: 307 NSCLSGDYMGSWSFDHELQAGERIVFEDMIHYTMVKTNMFNGIHHPAIALWTADGKAEIF 366

Query: 355 REFSYNDYYNNLS 367
           R+FSY DY + +S
Sbjct: 367 RQFSYEDYRDRMS 379


>gi|224367263|ref|YP_002601426.1| NspC [Desulfobacterium autotrophicum HRM2]
 gi|223689979|gb|ACN13262.1| NspC [Desulfobacterium autotrophicum HRM2]
          Length = 385

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 129/373 (34%), Positives = 201/373 (53%), Gaps = 8/373 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP +++D   L +NL     +++  G ++LLALK FA + +F  L + +DG  +SS  
Sbjct: 14  VSTPGFVVDADCLRHNLSILARVKQATGCRILLALKGFAMFRVFPLLRETLDGVCASSPD 73

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIG 119
           E  LG E+F  E H +  A+ D  +D +L+  D I+FN+  Q  +FK +  A       G
Sbjct: 74  EARLGREEFCREVHTFAAAFSDEHMDELLTLSDHIVFNSFGQWKRFKARVQAAGRAISCG 133

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +R+NP  S     L DP  P SRLG +  +   +E+  ++GL FH  CE          +
Sbjct: 134 IRVNPEHSEGTIPLYDPCAPGSRLGVRRANFEAAELAGISGLHFHTLCEQD-ADALERTV 192

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
              E  FG F+  + W++ GGG H T   Y ++  C+ ++     Y+V +YLEPGEA+  
Sbjct: 193 TAFEHGFGPFLKGLAWVNFGGGHHITRPGYDLERLCRVIRRIQTDYNVTVYLEPGEAVAL 252

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCGR 295
           N   L  +VLDI  +   + I+D+S  AH+PD L       +     P    +T  + G 
Sbjct: 253 NAGVLVASVLDIINSDMPIAILDTSAAAHMPDVLEMPYRPHVTGSGEPGEKQHTYRLAGL 312

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGT-IKAI 354
           SCLAGD+ GE+ F+ P+KIG R+ F D+A Y++ + N FNGI +P+I++   D   ++ +
Sbjct: 313 SCLAGDVIGEYSFDHPLKIGSRLVFTDMAIYSMVKTNTFNGIRLPSISLYEPDTDCLERV 372

Query: 355 REFSYNDYYNNLS 367
           R F Y D+   LS
Sbjct: 373 RTFGYQDFKMRLS 385


>gi|253568496|ref|ZP_04845907.1| carboxynorspermidine decarboxylase [Bacteroides sp. 1_1_6]
 gi|251842569|gb|EES70649.1| carboxynorspermidine decarboxylase [Bacteroides sp. 1_1_6]
          Length = 379

 Score =  263 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 119/373 (31%), Positives = 197/373 (52%), Gaps = 9/373 (2%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+++++ L  NL     +   AGV+++LA K FA W  F    +Y++ +T+SS+YE
Sbjct: 8   PSPCYIMEEELLRKNLCLIKSVADRAGVEIILAFKSFAMWRSFPIFREYVEHSTASSVYE 67

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHKKIGL 120
             L  E+FG + H Y+ AY + +   ++     I FN+++Q  +F     A+      G+
Sbjct: 68  ARLALEEFGSKAHTYSPAYTEQDFPEIMRCSSHITFNSMAQFRRFYPMTVAEGSGISCGI 127

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP  S  +  L +P  P +R G       ++  K + G   H +CE+ SF      L+
Sbjct: 128 RVNPEYSEVETELYNPCAPGTRFGMTADLLPDTLPKGIEGFHCHCHCESSSFE-LERTLQ 186

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239
           ++E++F  +  QI+W++LGGG   T KDY  +   + L++   +Y   QI LEPG A   
Sbjct: 187 HLEEKFSRWFPQIKWLNLGGGHLMTRKDYDTEHLIKLLQDLKARYPHLQIILEPGSAFTW 246

Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCG 294
            T  L + V+DI E+      + + S   H+PD L       +      N G +   + G
Sbjct: 247 QTGVLTSEVVDIVESRGIRTAILNVSFTCHMPDCLEMPYQPAVRGAEMGNEGEFIYRLGG 306

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            SCL+GD  G + F+  ++IG+RI FED+  Y + + N FNGI+ P IA+   +G  +  
Sbjct: 307 NSCLSGDYMGVWSFDHELQIGERIVFEDMIHYTMVKTNMFNGIHHPAIALWTKEGKAEIY 366

Query: 355 REFSYNDYYNNLS 367
           ++FSY DY + +S
Sbjct: 367 KQFSYEDYRDRMS 379


>gi|60682034|ref|YP_212178.1| putative carboxynorspermidine decarboxylase [Bacteroides fragilis
           NCTC 9343]
 gi|60493468|emb|CAH08254.1| putative carboxynorspermidine decarboxylase [Bacteroides fragilis
           NCTC 9343]
 gi|301163498|emb|CBW23049.1| putative carboxynorspermidine decarboxylase [Bacteroides fragilis
           638R]
          Length = 379

 Score =  263 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 119/373 (31%), Positives = 195/373 (52%), Gaps = 9/373 (2%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+++++ L  NL     +  +AGV+++LA K FA W  F    +Y+  +T+SS+YE
Sbjct: 8   PSPCYIMEEELLRKNLSLIKSVADDAGVEIILAFKSFAMWRSFPIFREYIGHSTASSVYE 67

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGL 120
             L  E+FG + H Y+ AY + +   ++     I FN++SQ ++F     A+      G+
Sbjct: 68  ARLALEEFGSKAHTYSPAYTEADFPEIMRCSSHITFNSLSQFSRFYPLTVAEGSGISCGI 127

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP  S  +  L +P  P +R G           + + G   H +CE+ SF      L+
Sbjct: 128 RVNPEYSEVETELYNPCAPGTRFGITADLLPARLPQGIEGFHCHCHCESSSFE-LERTLQ 186

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239
           ++E++F  + +QI+W++LGGG   T KDY  +     L+   ++Y   +I LEPG A   
Sbjct: 187 HLEEKFSPWFSQIKWLNLGGGHLMTRKDYDTRHLTGLLQGLKKRYPHLRIILEPGSAFTW 246

Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCG 294
            T  L + V+DI E+      + + S   H+PD L       +        GP+   + G
Sbjct: 247 QTGVLTSEVVDIVESRGIRTAILNVSFTCHMPDCLEMPYQPAVRGAVMGEEGPFVYRLGG 306

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            SCL+GD  G + F+  ++ G+RI FED+  Y + + N FNGI+ P IA+   DG  +  
Sbjct: 307 NSCLSGDYMGSWSFDHELQAGERIVFEDMIHYTMVKTNMFNGIHHPAIALWTADGKAEIF 366

Query: 355 REFSYNDYYNNLS 367
           R+FSY DY + +S
Sbjct: 367 RQFSYEDYRDRMS 379


>gi|326571108|gb|EGE21132.1| carboxynorspermidine decarboxylase [Moraxella catarrhalis BC7]
          Length = 400

 Score =  263 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 184/382 (48%), Positives = 250/382 (65%), Gaps = 16/382 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TPYYL+D++ +++NL     +   +GVK LLALKCFA WG+F+++  Y+ GTTSSSL 
Sbjct: 19  IQTPYYLLDERAIIDNLSITQKVCHESGVKALLALKCFATWGVFESMQPYLHGTTSSSLK 78

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG E FGGETHAY+VAY D EI  VL  CD IIFN+++QL +F   A   +  +GLR
Sbjct: 79  EVRLGKEYFGGETHAYSVAYADHEIKEVLDYCDKIIFNSINQLKRFGQLAHDKNIPVGLR 138

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP  S S FI+ADP RPFSRLGE   + I +    + G+M HNNCEN  F  FS  L +
Sbjct: 139 LNPQTSNSSFIIADPARPFSRLGEHDVESIMAIADQITGVMIHNNCENTDFEAFSQSLTD 198

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           IE  FG    ++EWIS GGGIH+ D++YP+  F  +LK+FSE Y VQIYLEPGEA V   
Sbjct: 199 IENRFGELFHRLEWISFGGGIHYIDQNYPLDKFINKLKDFSETYGVQIYLEPGEASVHQG 258

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG--------------- 286
             L T+VLD+  N K L +VD+S+EAH+ D L+Y++S+ +                    
Sbjct: 259 AVLVTSVLDVMYNNKPLAVVDASIEAHMLDLLIYRQSSPLAYVNETAYDTTGADFDGTST 318

Query: 287 -PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
              +  + G+SCLAGDIFG++   +P+KIGD+++F + A Y + +KNWFNG++MP+I + 
Sbjct: 319 DETSVRIYGKSCLAGDIFGDYTLNEPLKIGDKVAFGNAAAYTMVKKNWFNGVDMPSIVII 378

Query: 346 NVDGTIKAIREFSYNDYYNNLS 367
             DG I   R+F Y DY  +LS
Sbjct: 379 RQDGEIMIQRQFDYEDYKASLS 400


>gi|312137223|ref|YP_004004560.1| diaminopimelate decarboxylase [Methanothermus fervidus DSM 2088]
 gi|311224942|gb|ADP77798.1| diaminopimelate decarboxylase [Methanothermus fervidus DSM 2088]
          Length = 428

 Score =  263 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 76/392 (19%), Positives = 127/392 (32%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ID+ K+  N        K      K+L A K      +   LN    G  + S 
Sbjct: 24  DTPLYVIDENKIRENYRRIYNAFKKRYDKFKILYACKANTNIAIMKILNDEGSGIDAVSP 83

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLHKKI 118
            E+ +     F  E   +       +           I  +++SQL +          +I
Sbjct: 84  GEIYIALVAGFKPEEILFTGNNVRNDELEFAVESGVMINIDSISQLKRLSKLCNPEEVEI 143

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCENKSF 172
             RINP V              S+ G   KD +++          + G+  H        
Sbjct: 144 SFRINPLVGAGHHEHCITGGEMSKFGIAEKDAVKAYSMAKNLGFKIKGIHCHIGSGILDP 203

Query: 173 LCFSAMLKN----IEKEFGHFITQIEWISLGGGIHFTDKDYPVK--------DFCQRLKE 220
             F   +       E+       + E+I +GGG     K    +           +  KE
Sbjct: 204 SPFLMAVDALTKIAERVSKEVGIEFEFIDIGGGFGIPYKPEEPELNIENLAKKIIEVFKE 263

Query: 221 FSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
             ++Y++    +Y+EPG  IV N   L T V  I ++ +    VD+     +   +    
Sbjct: 264 RCDEYNLGNPWLYIEPGRYIVGNAACLLTRVNTIKKSYRKFAGVDAGFNTLIRPAMYGSY 323

Query: 278 SATIYPNTGPYTAM----VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
              I  N           + G  C +GDIF        ++ GD ++  D   Y  +  + 
Sbjct: 324 HHIIVANKANEEPCEKIDIAGNLCESGDIFARDRELPKLEEGDILAIMDAGAYCFSMSSQ 383

Query: 334 FNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           +N    P   +   D         S  D  + 
Sbjct: 384 YNSRPRPAEVLVKDDKVSIIRERESIIDLLDK 415


>gi|298385451|ref|ZP_06995009.1| carboxynorspermidine decarboxylase [Bacteroides sp. 1_1_14]
 gi|298261592|gb|EFI04458.1| carboxynorspermidine decarboxylase [Bacteroides sp. 1_1_14]
          Length = 379

 Score =  263 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 119/373 (31%), Positives = 197/373 (52%), Gaps = 9/373 (2%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+++++ L  NL     +   AGV+++LA K FA W  F    +Y++ +T+SS+YE
Sbjct: 8   PSPCYIMEEELLRKNLCLIKSVADRAGVEIILAFKSFAMWRSFPIFREYVEHSTASSVYE 67

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHKKIGL 120
             L  E+FG + H Y+ AY + +   ++     I FN+++Q  +F     A+      G+
Sbjct: 68  ARLALEEFGSKAHTYSPAYTEQDFPEIMRCSSHITFNSMAQFRRFYPMTVAEGSGISCGI 127

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP  S  +  L +P  P +R G       ++  K + G   H +CE+ SF      L+
Sbjct: 128 RVNPEYSEVETELYNPCAPGTRFGMTADLLPDTLPKGIEGFHCHCHCESSSFE-LERTLQ 186

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239
           ++E++F  +  QI+W++LGGG   T KDY  +   + L++   +Y   QI LEPG A   
Sbjct: 187 HLEEKFSRWFPQIKWLNLGGGHLMTRKDYDTEHLIKLLQDLKARYPHLQIILEPGSAFTW 246

Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCG 294
            T  L + V+DI E+      + + S   H+PD L       +      N G +   + G
Sbjct: 247 QTGVLTSEVVDIVESRGIKTAILNVSFTCHMPDCLEMPYQPAVRGAEMGNEGEFIYRLGG 306

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            SCL+GD  G + F+  ++IG+RI FED+  Y + + N FNGI+ P IA+   +G  +  
Sbjct: 307 NSCLSGDYMGLWSFDHELQIGERIVFEDMIHYTMVKTNMFNGIHHPAIALWTKEGKAEIY 366

Query: 355 REFSYNDYYNNLS 367
           ++FSY DY + +S
Sbjct: 367 KQFSYEDYRDRMS 379


>gi|15602236|ref|NP_245308.1| NspC [Pasteurella multocida subsp. multocida str. Pm70]
 gi|12720617|gb|AAK02455.1| NspC [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 373

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 216/370 (58%), Positives = 272/370 (73%), Gaps = 6/370 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TPYYLIDK KLL N++   Y+R+ +G K LLALKCFA WG+FD + QYMDGTTSSSLY
Sbjct: 6   LQTPYYLIDKSKLLRNMEKIAYLREKSGAKALLALKCFATWGVFDFMCQYMDGTTSSSLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG EKFGGETHAY+VAY   EI  V++N D IIFN++SQL +F D     H   GLR
Sbjct: 66  EVKLGREKFGGETHAYSVAYSPEEIGEVVANADKIIFNSISQLQRFCD--HTTHLPRGLR 123

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP VS S F+LADP RP SRLGE    KI   +  +NG MFHNNCEN+ F  F  ML  
Sbjct: 124 VNPRVSTSSFLLADPARPHSRLGEWDVAKIRDVMPLINGFMFHNNCENEDFGKFCEMLDR 183

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           IE+EFG  + Q++W+SLGGGIHFT ++YP++ F +RLK+FS K+ VQ+YLEPGEA +T +
Sbjct: 184 IEQEFGELLHQVDWVSLGGGIHFTGENYPLEAFAERLKQFSAKFGVQVYLEPGEAAITLS 243

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----TGPYTAMVCGRSC 297
           T+L  TVLDI  N K L IVD++ EAH+ D L+Y+  A + P+     G Y  MVCG+SC
Sbjct: 244 TSLEVTVLDILNNGKELAIVDAATEAHMLDLLIYRSEAKLLPDAFQGKGDYQYMVCGKSC 303

Query: 298 LAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF 357
           LAGDIFGE+ FEKP++IGDRISF D AGY + +KNWFNG+NMP IA+K +DG I+ ++ F
Sbjct: 304 LAGDIFGEYRFEKPLQIGDRISFCDAAGYTMVKKNWFNGVNMPAIAIKELDGRIRVVKTF 363

Query: 358 SYNDYYNNLS 367
            Y DY  +LS
Sbjct: 364 GYQDYVESLS 373


>gi|299146075|ref|ZP_07039143.1| carboxynorspermidine decarboxylase [Bacteroides sp. 3_1_23]
 gi|298516566|gb|EFI40447.1| carboxynorspermidine decarboxylase [Bacteroides sp. 3_1_23]
          Length = 379

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 118/373 (31%), Positives = 193/373 (51%), Gaps = 9/373 (2%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+++++ L  NL     +   AGV+++LA K FA W  F    +Y++ +T+SS+YE
Sbjct: 8   PSPCYIMEEELLRKNLSLIKSVADRAGVEIILAFKSFAMWRSFPIFREYINHSTASSVYE 67

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIGL 120
             L  E+FG + H Y+ AY + +   ++     I FN++ Q  +F     A+      G+
Sbjct: 68  ARLALEEFGSKAHTYSPAYTEQDFPEIMRCSSHITFNSMQQFERFYPMVVAEGSGISCGI 127

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP  S  +  L +P  P +R G       +   + + G   H +CE+ S+      L+
Sbjct: 128 RVNPEYSEVETELYNPCAPGTRFGITADLLPDVLPQGIEGFHCHCHCESSSYE-LERTLE 186

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY-LEPGEAIVT 239
           ++E +F H+  QI+W++LGGG   T KDY  +   + L+    +YS     LEPG A   
Sbjct: 187 HLEAKFAHWFPQIKWLNLGGGHLMTRKDYDTEHLIRLLQGLKARYSHLRIVLEPGSAFTW 246

Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCG 294
            T  L + V+DI E+      + + S   H+PD L       +      N G Y   + G
Sbjct: 247 QTGVLASEVVDIVESRGIKTAILNVSFTCHMPDCLEMPYQPAVRGAEMGNEGKYIYRLGG 306

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            SCL+GD  G + F+  ++IG+RI FED+  Y + + N FNGI+ P IA+   +G  +  
Sbjct: 307 NSCLSGDYMGLWSFDHELQIGERIVFEDMIHYTMVKTNMFNGIHHPAIAIWTKEGKAEIY 366

Query: 355 REFSYNDYYNNLS 367
           ++FSY DY + +S
Sbjct: 367 KQFSYEDYRDRMS 379


>gi|297568101|ref|YP_003689445.1| carboxynorspermidine decarboxylase [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296924016|gb|ADH84826.1| carboxynorspermidine decarboxylase [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 391

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 132/380 (34%), Positives = 199/380 (52%), Gaps = 15/380 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P Y+ D  KL  NL     +++  G K++LA K FA W +F  +   + G ++SSL 
Sbjct: 13  VPSPCYVCDTGKLAANLAALDEVQRRTGAKIILAFKGFAMWSLFPQIRAVLPGASASSLD 72

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHKKIG 119
           E  L  E+FGGE H Y  AY++ +   +L   D ++FN+ SQ  ++  +  A +     G
Sbjct: 73  EARLAAEEFGGEVHVYCPAYREEDFAEMLGYADHLVFNSFSQWQQYQGQVAAHQRQISCG 132

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENKSF 172
           +R+NP  S  +  L +P   +SRLG   +      +         + GL FH  CE    
Sbjct: 133 IRVNPEYSEVEVDLYNPCGRYSRLGVTREHFRPELLAGPEQLAPAIEGLHFHALCEQN-A 191

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232
              +  L    ++FG F+  ++W++ GGG H T  DY  +  C+ + E  ++Y VQ+YLE
Sbjct: 192 DALAGTLAAFNEKFGRFVQGMKWLNFGGGHHITRADYDRELLCRLIDETQQRYGVQVYLE 251

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPY 288
           PGEAI  N   L   VLDI EN  ++ I+D+S   H+PD L       I     P   P+
Sbjct: 252 PGEAIALNIGVLVARVLDIVENEISIAILDTSAATHMPDVLEMPYRPHIFGAGEPGQYPH 311

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-V 347
           T  + G SCLAGDI G++ F +P+  G R+ F D+A Y + +   FNG+ +P+IA  +  
Sbjct: 312 TYRLGGLSCLAGDIIGDYSFPEPLTPGQRLVFGDMAHYTMVKNTTFNGVRLPSIATYDPA 371

Query: 348 DGTIKAIREFSYNDYYNNLS 367
              +K IR F Y DY N LS
Sbjct: 372 TDNLKVIRRFGYEDYRNRLS 391


>gi|326560115|gb|EGE10505.1| carboxynorspermidine decarboxylase [Moraxella catarrhalis 46P47B1]
 gi|326577169|gb|EGE27063.1| carboxynorspermidine decarboxylase [Moraxella catarrhalis O35E]
          Length = 400

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 184/382 (48%), Positives = 248/382 (64%), Gaps = 16/382 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TPYYL+D++ +++NL     +   +G K LLALKCFA WG+F+++  Y+ GTTSSSL 
Sbjct: 19  IQTPYYLLDERAIIDNLSITQKVCHESGAKALLALKCFATWGVFESMQPYLHGTTSSSLK 78

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG E FGGETHAY+VAY D EI  VL  CD IIFN+++QL +F   A   +  +GLR
Sbjct: 79  EVRLGKECFGGETHAYSVAYADHEIKEVLGYCDKIIFNSINQLKRFGQLAHDKNIPVGLR 138

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP  S S FI+ADP RPFSRLGE   + I +    + G+M HNNCEN  F  FS  L +
Sbjct: 139 LNPQTSNSSFIIADPARPFSRLGEHDVESIMAIADQITGVMIHNNCENTDFEAFSQSLTD 198

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           IE  FG    ++EWIS GGGIH+ D++YP+  F  RLK FSE Y VQIYLEPGEA V   
Sbjct: 199 IENRFGELFHRLEWISFGGGIHYIDQNYPLDKFINRLKNFSETYGVQIYLEPGEASVHQG 258

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG--------------- 286
             L T+VLD+  N K L +VD+S+EAH+ D L+Y++S+ +                    
Sbjct: 259 AVLVTSVLDVMYNNKPLAVVDASIEAHMLDLLIYRQSSPLAYVNETTYDITGADFDGTSA 318

Query: 287 -PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
              +  + G+SCLAGDIFG++   +P+KIGD+++F + A Y + +KNWFNG++MP+I + 
Sbjct: 319 DETSVRIYGKSCLAGDIFGDYTLNEPLKIGDKVAFGNAAAYTMVKKNWFNGVDMPSIVII 378

Query: 346 NVDGTIKAIREFSYNDYYNNLS 367
             DG I   R+F Y DY  +LS
Sbjct: 379 RQDGEIMIQRQFDYEDYKASLS 400


>gi|296113122|ref|YP_003627060.1| carboxynorspermidine decarboxylase [Moraxella catarrhalis RH4]
 gi|295920816|gb|ADG61167.1| carboxynorspermidine decarboxylase [Moraxella catarrhalis RH4]
          Length = 400

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 184/382 (48%), Positives = 248/382 (64%), Gaps = 16/382 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TPYYL+D++ +++NL     +   +G K LLALKCFA WG+F+++  Y+ GTTSSSL 
Sbjct: 19  IQTPYYLLDERAIIDNLSITQKVCHESGAKALLALKCFATWGVFESMQPYLHGTTSSSLK 78

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG E FGGETHAY+VAY D EI  VL  CD IIFN+++QL +F   A   +  +GLR
Sbjct: 79  EVRLGKECFGGETHAYSVAYADHEIKEVLGYCDKIIFNSINQLKRFGQLADDKNIPVGLR 138

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP  S S FI+ADP RPFSRLGE   + I +    + G+M HNNCEN  F  FS  L +
Sbjct: 139 LNPQTSNSSFIIADPARPFSRLGEHDVESIMAIADQITGVMIHNNCENTDFEAFSQSLTD 198

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           IE  FG    ++EWIS GGGIH+ D++YP+  F  RLK FSE Y VQIYLEPGEA V   
Sbjct: 199 IENRFGELFHRLEWISFGGGIHYIDQNYPLDKFINRLKNFSETYGVQIYLEPGEASVHQG 258

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG--------------- 286
             L T+VLD+  N K L +VD+S+EAH+ D L+Y++S+ +                    
Sbjct: 259 AVLVTSVLDVMYNNKPLAVVDASIEAHMLDLLIYRQSSPLAYVNETTYDITGADFDGTST 318

Query: 287 -PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
              +  + G+SCLAGDIFG++   +P+KIGD+++F + A Y + +KNWFNG++MP+I + 
Sbjct: 319 DETSVRIYGKSCLAGDIFGDYTLNEPLKIGDKVAFGNAAAYTMVKKNWFNGVDMPSIVII 378

Query: 346 NVDGTIKAIREFSYNDYYNNLS 367
             DG I   R+F Y DY  +LS
Sbjct: 379 RQDGEIMIQRQFDYEDYKASLS 400


>gi|317486184|ref|ZP_07945022.1| carboxynorspermidine decarboxylase [Bilophila wadsworthia 3_1_6]
 gi|316922561|gb|EFV43809.1| carboxynorspermidine decarboxylase [Bilophila wadsworthia 3_1_6]
          Length = 406

 Score =  262 bits (669), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 124/393 (31%), Positives = 205/393 (52%), Gaps = 29/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG----TTSS 58
            +P +++D+ KL +N+     +++  G K+L+ALKCFA W +F  +++  +G      +S
Sbjct: 15  PSPGFVVDEAKLRSNVAILDEVQRRTGAKILMALKCFAMWDVFPIISRSGEGALYGCCAS 74

Query: 59  SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL---- 114
           S  E  L  E FGGE HA+   Y + ++  +L   D ++FN+ +Q  +FK   +      
Sbjct: 75  SPDEARLARECFGGEVHAFAAGYSEADMVELLETVDHVLFNSFAQWERFKGMVEAKNAGR 134

Query: 115 --HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------------KNVN 159
               + G+R+NP  S     + DP  P SRLG + ++                   K ++
Sbjct: 135 ATPIECGIRVNPEHSEGAVPMYDPCAPGSRLGVRLREFERFASAGGCPAQTPPPGLKGLS 194

Query: 160 GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK 219
           GL FH  CE          LK  E +FG ++  ++W++ GGG H T + Y +   C+ ++
Sbjct: 195 GLHFHTLCEQG-ADALDRTLKAFEMKFGRYLKGLKWMNFGGGHHITKEGYDIDLLCKCIE 253

Query: 220 EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA 279
              ++Y VQ+YLEPGEA+  N   L +TVLD+      + I+D+S   H+PD L      
Sbjct: 254 RVRDRYGVQVYLEPGEAVALNAGVLVSTVLDVVRADMPVAILDTSAATHMPDVLEMPYRP 313

Query: 280 TIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
            +     P    ++  + G+SCLAGD+ GE+ F++P+K GDR+ F D+A Y++ +   FN
Sbjct: 314 MVIGSGEPGEKRWSCRLAGKSCLAGDVIGEYSFDEPLKAGDRLVFTDMAIYSMVKTTTFN 373

Query: 336 GINMPTIAVKN-VDGTIKAIREFSYNDYYNNLS 367
           G+ +P+I   N      + +REF Y D+   LS
Sbjct: 374 GLRLPSIVRWNPETDETRLVREFGYEDFKMRLS 406


>gi|291288495|ref|YP_003505311.1| carboxynorspermidine decarboxylase [Denitrovibrio acetiphilus DSM
           12809]
 gi|290885655|gb|ADD69355.1| carboxynorspermidine decarboxylase [Denitrovibrio acetiphilus DSM
           12809]
          Length = 386

 Score =  262 bits (669), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 138/371 (37%), Positives = 208/371 (56%), Gaps = 7/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTP YLI +  +  N +   Y++K+ G K+LLALK FA   +F  +++Y+ G  +S   
Sbjct: 18  VKTPCYLISRDVIKCNCELLDYVQKHTGAKILLALKAFAMPAVFPLISEYLHGVCASGPI 77

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  +G E+FG E H Y+ A+ D + +  +   D I+FN+VSQ   FKDK     K++GLR
Sbjct: 78  EAQMGREEFGREVHTYSPAFTDEQFERTVRYSDHIVFNSVSQWKLFKDK-IPAEKEVGLR 136

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP  +  +  L +P    SR G    D    ++K ++GL FH  CE  S      +L++
Sbjct: 137 VNPGHAEVEVDLYNPCISGSRFGVNPADLEGVDLKGIDGLHFHAMCEQNS-DVLVRILES 195

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-VQIYLEPGEAIVTN 240
            EK FGH I Q++WI+ GGG H T  DY V    + +  F E+Y+ +++YLEPGEA+V N
Sbjct: 196 FEKRFGHLIPQMKWINFGGGHHITRDDYDVDLLIETVLSFRERYNGIRVYLEPGEAVVLN 255

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----TGPYTAMVCGRS 296
                T+VLD  +N  ++ ++D S E H+PD L       +          +T  + G S
Sbjct: 256 AGVFVTSVLDTIKNGVDIAVMDCSAETHMPDVLAMPYRPHLIEADEAGKKAHTYKLGGIS 315

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CLAGD  G + FE  +K GDR+ F D+A Y+  +   FNG+ +P +AV +  G ++ +R 
Sbjct: 316 CLAGDFIGTYSFEHELKRGDRLVFTDMALYSFVKNTSFNGVELPDLAVFDNSGAVEVVRR 375

Query: 357 FSYNDYYNNLS 367
           F Y DY   LS
Sbjct: 376 FGYADYKGRLS 386


>gi|255009479|ref|ZP_05281605.1| putative carboxynorspermidine decarboxylase [Bacteroides fragilis
           3_1_12]
 gi|313147250|ref|ZP_07809443.1| carboxynorspermidine decarboxylase [Bacteroides fragilis 3_1_12]
 gi|313136017|gb|EFR53377.1| carboxynorspermidine decarboxylase [Bacteroides fragilis 3_1_12]
          Length = 379

 Score =  262 bits (669), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 120/373 (32%), Positives = 194/373 (52%), Gaps = 9/373 (2%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+++++ L  NL     +   AGV+++LA K FA W  F    +Y+  +T+SS+YE
Sbjct: 8   PSPCYIMEEELLRKNLSLIKSVADRAGVEIILAFKSFAMWRSFPIFREYIGHSTASSVYE 67

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHKKIGL 120
             L  E+FG + H Y+ AY + +   ++     I FN+++Q ++F     A       G+
Sbjct: 68  ARLALEEFGSKAHTYSPAYTEADFPEIMRCSSHITFNSMAQFHRFYPMTVAGGSDISCGI 127

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           RINP  S  +  L +P  P +R G       E   + + G   H +CE+ SF      L+
Sbjct: 128 RINPEYSEVETELYNPCAPGTRFGITADLLPEQLPQGIEGFHCHCHCESSSFE-LERTLQ 186

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239
           ++E++F  + +QI+W++LGGG   T KDY  +     L+   ++Y   +I LEPG A   
Sbjct: 187 HLEEKFSPWFSQIKWLNLGGGHLMTRKDYDTEHLIGLLQGLKKRYPHLRIILEPGSAFTW 246

Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCG 294
            T  L + V+DI E+      + + S   H+PD L       +        GP+   + G
Sbjct: 247 QTGVLTSEVVDIVESRGIRTAILNVSFTCHMPDCLEMPYQPAVRGAVMGEEGPFVYRLGG 306

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            SCL+GD  G + F+  ++IG+RI FED+  Y + + N FNGI+ P IA+    G  +  
Sbjct: 307 NSCLSGDYMGSWSFDHELQIGERIVFEDMIHYTMVKTNMFNGIHHPAIALWTASGNAEIF 366

Query: 355 REFSYNDYYNNLS 367
           ++FSY DY N +S
Sbjct: 367 KQFSYEDYRNRMS 379


>gi|326564169|gb|EGE14405.1| carboxynorspermidine decarboxylase [Moraxella catarrhalis 12P80B1]
          Length = 400

 Score =  262 bits (669), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 184/382 (48%), Positives = 248/382 (64%), Gaps = 16/382 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TPYYL+D++ +++NL     +   +G K LLALKCFA WG+F+++  Y+ GTTSSSL 
Sbjct: 19  IQTPYYLLDERAIIDNLSVTQKVCHESGAKALLALKCFATWGVFESMQPYLHGTTSSSLK 78

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG E FGGETHAY+VAY D EI  VL  CD IIFN+++QL +F   A   +  +GLR
Sbjct: 79  EVRLGKECFGGETHAYSVAYADHEIKEVLGYCDKIIFNSINQLKRFGQLAHDKNIPVGLR 138

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP  S S FI+ADP RPFSRLGE   + I +    + G+M HNNCEN  F  FS  L +
Sbjct: 139 LNPQTSNSSFIIADPARPFSRLGEHDVESIMAIADQITGVMIHNNCENTDFEAFSQSLTD 198

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           IE  FG    ++EWIS GGGIH+ D++YP+  F  RLK FSE Y VQIYLEPGEA V   
Sbjct: 199 IENRFGELFHRLEWISFGGGIHYIDQNYPLDKFINRLKNFSETYGVQIYLEPGEASVHQG 258

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG--------------- 286
             L T+VLD+  N K L +VD+S+EAH+ D L+Y++S+ +                    
Sbjct: 259 AVLVTSVLDVMYNNKPLAVVDASIEAHMLDLLIYRQSSPLAYVNETTYDITGADFDGTSA 318

Query: 287 -PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
              +  + G+SCLAGDIFG++   +P+KIGD+++F + A Y + +KNWFNG++MP+I + 
Sbjct: 319 DETSVRIYGKSCLAGDIFGDYTLNEPLKIGDKVAFGNAAAYTMVKKNWFNGVDMPSIVII 378

Query: 346 NVDGTIKAIREFSYNDYYNNLS 367
             DG I   R+F Y DY  +LS
Sbjct: 379 RQDGEIMIQRQFDYEDYKASLS 400


>gi|237714592|ref|ZP_04545073.1| carboxynorspermidine decarboxylase [Bacteroides sp. D1]
 gi|262406458|ref|ZP_06083007.1| carboxynorspermidine decarboxylase [Bacteroides sp. 2_1_22]
 gi|294643700|ref|ZP_06721500.1| carboxynorspermidine decarboxylase [Bacteroides ovatus SD CC 2a]
 gi|294805868|ref|ZP_06764739.1| carboxynorspermidine decarboxylase [Bacteroides xylanisolvens SD CC
           1b]
 gi|298481117|ref|ZP_06999311.1| carboxynorspermidine decarboxylase [Bacteroides sp. D22]
 gi|229445361|gb|EEO51152.1| carboxynorspermidine decarboxylase [Bacteroides sp. D1]
 gi|262355161|gb|EEZ04252.1| carboxynorspermidine decarboxylase [Bacteroides sp. 2_1_22]
 gi|292640938|gb|EFF59156.1| carboxynorspermidine decarboxylase [Bacteroides ovatus SD CC 2a]
 gi|294446932|gb|EFG15528.1| carboxynorspermidine decarboxylase [Bacteroides xylanisolvens SD CC
           1b]
 gi|298272691|gb|EFI14258.1| carboxynorspermidine decarboxylase [Bacteroides sp. D22]
          Length = 379

 Score =  261 bits (668), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 117/373 (31%), Positives = 192/373 (51%), Gaps = 9/373 (2%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+++++ L  NL     +   AGV+++LA K FA W  F    +Y+  +T+SS+YE
Sbjct: 8   PSPCYIMEEELLRKNLCLIKNVADRAGVEIILAFKSFAMWRSFPIFREYIAHSTASSVYE 67

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIGL 120
             L  E+FG + H Y+ AY + +   ++     I FN++ Q  +F     A+      G+
Sbjct: 68  ARLALEEFGSKAHTYSPAYTEQDFPEIMRCSSHITFNSMQQFERFYPMVVAEGSGISCGI 127

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP  S  +  L +P  P +R G       +   + + G   H +CE+ S+      L+
Sbjct: 128 RVNPEYSEVETELYNPCAPGTRFGITADLLPDVLPQGIEGFHCHCHCESSSYE-LERTLE 186

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239
           ++E +F  +  QI+W++LGGG   T KDY  +     L+    ++   +I LEPG A + 
Sbjct: 187 HLEAKFSRWFPQIKWLNLGGGHLMTRKDYDTEHLITLLQGLKARHPHLRIILEPGSAFIW 246

Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCG 294
            T  L + V+DI E+      + + S   H+PD L       +      N G Y   + G
Sbjct: 247 QTGVLTSEVVDIVESRGIKTAILNVSFTCHMPDCLEMPYQPAVRGAEMGNEGKYIYRLGG 306

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            SCL+GD  G + F+ P++IG+RI FED+  Y + + N FNGI+ P IA+   +G  +  
Sbjct: 307 NSCLSGDYMGLWSFDHPLQIGERIVFEDMIHYTMVKTNMFNGIHHPAIAIWTKEGKAEIY 366

Query: 355 REFSYNDYYNNLS 367
           ++FSY DY   +S
Sbjct: 367 KQFSYEDYRGRMS 379


>gi|253565787|ref|ZP_04843242.1| carboxynorspermidine decarboxylase [Bacteroides sp. 3_2_5]
 gi|251946066|gb|EES86473.1| carboxynorspermidine decarboxylase [Bacteroides sp. 3_2_5]
          Length = 379

 Score =  261 bits (668), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 119/373 (31%), Positives = 194/373 (52%), Gaps = 9/373 (2%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+++++ L  NL     +  +AGV+++LA K FA W  F    +Y+  +T+SS YE
Sbjct: 8   PSPCYIMEEELLRKNLSLIKSVADDAGVEIILAFKSFAMWRSFPIFREYIGHSTASSAYE 67

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGL 120
             L  E+FG + H Y+ AY + +   ++     I FN++SQ ++F     A+      G+
Sbjct: 68  ARLALEEFGSKAHTYSPAYTEADFPEIMRCSSHITFNSLSQFSRFYPLTVAEGSGISCGI 127

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP  S  +  L +P  P +R G           + + G   H +CE+ SF      L+
Sbjct: 128 RVNPEYSEVETELYNPCAPGTRFGITADLLPARLPQGIEGFHCHCHCESSSFE-LERTLQ 186

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239
           ++E++F  + +QI+W++LGGG   T KDY  +     L+   ++Y   +I LEPG A   
Sbjct: 187 HLEEKFSPWFSQIKWLNLGGGHLMTRKDYDTRHLTGLLQGLKKRYPHLRIILEPGSAFTW 246

Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCG 294
            T  L + V+DI E+      + + S   H+PD L       +        GP+   + G
Sbjct: 247 QTGVLTSEVVDIVESRGIRTAILNVSFTCHMPDCLEMPYQPAVRGAVMGEEGPFVYRLGG 306

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            SCL+GD  G + F+  ++ G+RI FED+  Y + + N FNGI+ P IA+   DG  +  
Sbjct: 307 NSCLSGDYMGAWSFDHELQAGERIVFEDMIHYTMVKTNMFNGIHHPAIALWTADGKAEIF 366

Query: 355 REFSYNDYYNNLS 367
           R+FSY DY + +S
Sbjct: 367 RQFSYEDYRDRMS 379


>gi|326560498|gb|EGE10880.1| carboxynorspermidine decarboxylase [Moraxella catarrhalis 7169]
          Length = 400

 Score =  261 bits (668), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 184/382 (48%), Positives = 248/382 (64%), Gaps = 16/382 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TPYYL+D++ +++NL     +   +G K LLALKCFA WG+F+++  Y+ GTTSSSL 
Sbjct: 19  IQTPYYLLDERAIIDNLSVTQKVCHESGAKALLALKCFATWGVFESMQPYLHGTTSSSLK 78

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG E FGGETHAY+VAY D EI  VL  CD IIFN+++QL +F   A   +  +GLR
Sbjct: 79  EVRLGKECFGGETHAYSVAYADHEIKEVLGYCDKIIFNSINQLKRFGPLAHDKNIPVGLR 138

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP  S S FI+ADP RPFSRLGE   + I +    + G+M HNNCEN  F  FS  L +
Sbjct: 139 LNPQTSNSSFIIADPARPFSRLGEHDVESIMAIADQITGVMIHNNCENTDFEAFSQSLTD 198

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           IE  FG    ++EWIS GGGIH+ D++YP+  F  RLK FSE Y VQIYLEPGEA V   
Sbjct: 199 IENRFGELFHRLEWISFGGGIHYIDQNYPLDKFINRLKNFSETYGVQIYLEPGEASVHQG 258

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG--------------- 286
             L T+VLD+  N K L +VD+S+EAH+ D L+Y++S+ +                    
Sbjct: 259 AVLVTSVLDVMYNNKPLAVVDASIEAHMLDLLIYRQSSPLAYVNETTYDITGADFDGTSA 318

Query: 287 -PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
              +  + G+SCLAGDIFG++   +P+KIGD+++F + A Y + +KNWFNG++MP+I + 
Sbjct: 319 DETSVRIYGKSCLAGDIFGDYTLNEPLKIGDKVAFGNAAAYTMVKKNWFNGVDMPSIVII 378

Query: 346 NVDGTIKAIREFSYNDYYNNLS 367
             DG I   R+F Y DY  +LS
Sbjct: 379 RQDGEIMIQRQFDYEDYKASLS 400


>gi|260427552|ref|ZP_05781531.1| carboxynorspermidine decarboxylase [Citreicella sp. SE45]
 gi|260422044|gb|EEX15295.1| carboxynorspermidine decarboxylase [Citreicella sp. SE45]
          Length = 363

 Score =  261 bits (668), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 205/366 (56%), Positives = 268/366 (73%), Gaps = 3/366 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TPYYLIDK +LL N++    +R+ +G K LLALKCFA W +FD +++YMDGTTSSSL+
Sbjct: 1   MQTPYYLIDKSRLLANMEKVARLRELSGAKALLALKCFATWSVFDLMSEYMDGTTSSSLF 60

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG EKF GETHAY+VA+ D EID VL++ D IIFNTV Q ++F++ ++      GLR
Sbjct: 61  EVKLGREKFPGETHAYSVAWADDEIDEVLASSDKIIFNTVGQFSRFEEVSRGHT--RGLR 118

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP VS S F LADP RPFSRLGE   + I   +  ++G MFHNNCEN  F  F AML  
Sbjct: 119 VNPGVSTSSFDLADPARPFSRLGEHDPEVIAPVLDQISGFMFHNNCENADFERFDAMLGA 178

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           IE+ FGH I +++WISLGGGIHFT + YP++   +RL+ F+ +  VQ+YLEPGEA +T +
Sbjct: 179 IEQRFGHLIREMKWISLGGGIHFTGEGYPLERLAERLRRFAGENEVQVYLEPGEAAITKS 238

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGD 301
           TTL  TVLD   N KNL IVDSS+EAH+ D L+Y+ESA +   +G    MVCG+SCLAGD
Sbjct: 239 TTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIYRESARMEQ-SGDQEWMVCGKSCLAGD 297

Query: 302 IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361
           IFGEF F  P+K GDRIS +D AGY + +KNWFNG+ MP+IA++ +DGT + +R+F+Y D
Sbjct: 298 IFGEFRFPAPLKAGDRISIQDAAGYTMVKKNWFNGVKMPSIAIRELDGTERLVRDFTYED 357

Query: 362 YYNNLS 367
           +   LS
Sbjct: 358 FAAALS 363


>gi|326570423|gb|EGE20463.1| carboxynorspermidine decarboxylase [Moraxella catarrhalis BC8]
          Length = 400

 Score =  261 bits (668), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 183/382 (47%), Positives = 248/382 (64%), Gaps = 16/382 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TPYYL+D++ +++NL     +   +G K LLALKCFA WG+F+++  Y+ GTTSSSL 
Sbjct: 19  IQTPYYLLDERAIIDNLSVTQKVCHESGAKALLALKCFATWGVFESMQPYLHGTTSSSLK 78

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E+ LG E FGGETHAY+VAY D EI  VL  CD IIFN+++QL +F   A   +  +GLR
Sbjct: 79  EMRLGKECFGGETHAYSVAYADHEIKEVLGYCDKIIFNSINQLKRFGQLAHDKNIPVGLR 138

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP  S S FI+ADP RPFSRLGE   + I +    + G+M HNNCEN  F  FS  L +
Sbjct: 139 LNPQTSNSSFIIADPARPFSRLGEHDVESIMAIADQITGVMIHNNCENTDFEAFSQSLTD 198

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           IE  FG    ++EWIS GGGIH+ D++YP+  F  RLK FSE Y VQIYLEPGEA V   
Sbjct: 199 IENRFGELFHRLEWISFGGGIHYIDQNYPLDKFINRLKNFSETYGVQIYLEPGEASVHQG 258

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG--------------- 286
             L T+VLD+  N K L +VD+S+EAH+ D L+Y++S+ +                    
Sbjct: 259 AVLVTSVLDVMYNNKPLAVVDASIEAHMLDLLIYRQSSPLAYVNETTYDITGADFDGTST 318

Query: 287 -PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
              +  + G+SCLAGDIFG++   +P+KIGD+++F + A Y + +KNWFNG++MP+I + 
Sbjct: 319 DETSVRIYGKSCLAGDIFGDYTLNEPLKIGDKVAFGNAAAYTMVKKNWFNGVDMPSIVII 378

Query: 346 NVDGTIKAIREFSYNDYYNNLS 367
             DG I   R+F Y DY  +LS
Sbjct: 379 RQDGEIMIQRQFDYEDYKASLS 400


>gi|319902364|ref|YP_004162092.1| carboxynorspermidine decarboxylase [Bacteroides helcogenes P
           36-108]
 gi|319417395|gb|ADV44506.1| carboxynorspermidine decarboxylase [Bacteroides helcogenes P
           36-108]
          Length = 381

 Score =  261 bits (668), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 121/373 (32%), Positives = 196/373 (52%), Gaps = 9/373 (2%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+++++ L  NL     +   AGV+++LA K FA W  F    +Y++ +T+SS+YE
Sbjct: 10  PSPCYIMEEELLRRNLTLIKSVADRAGVEIILAFKSFAMWRSFPVFREYIEHSTASSVYE 69

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHKKIGL 120
             L  E+FG + H Y+ AY + +   ++     I FN++ Q ++F     A+      G+
Sbjct: 70  ARLALEEFGSKAHTYSPAYTEADFPEIMRCSGHITFNSLMQFHRFYPMTVAEGSGISCGI 129

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           RINP  S  +  L +P  P +R G       E     + G   H +CE+ S+      L+
Sbjct: 130 RINPEYSEVETELYNPCAPGTRFGLMADQLPEILPYGIEGFHCHCHCESSSYE-LEHTLE 188

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239
            +E +F  + +QI+W++LGGG   T KDY ++   + L+   E+Y   QI LEPG A   
Sbjct: 189 RMEGKFSKWFSQIKWLNLGGGHLMTRKDYDIEHLIRLLQGLKERYPHLQIILEPGSAFTW 248

Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCG 294
            T  L + V+DI EN      V + S   H+PD L      ++      + G +   + G
Sbjct: 249 QTGVLTSEVVDIVENRGIRTAVLNVSFTCHMPDCLEMPYQPSVRGAQIGSEGAHVYRLGG 308

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            SCL+GD  G + F+  ++IG+RI FED+  Y + + N FNGI+ P IA+   +G  +  
Sbjct: 309 NSCLSGDYMGFWSFDHELQIGERIVFEDMIHYTMVKTNMFNGIHHPAIAMWTEEGNAEIF 368

Query: 355 REFSYNDYYNNLS 367
           ++FSY DY + +S
Sbjct: 369 KQFSYEDYRDRMS 381


>gi|29346084|ref|NP_809587.1| carboxynorspermidine decarboxylase [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29337978|gb|AAO75781.1| carboxynorspermidine decarboxylase [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 379

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 118/373 (31%), Positives = 197/373 (52%), Gaps = 9/373 (2%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+++++ L  NL     +   AGV+++LA K FA W  F    +Y++ +T+SS+YE
Sbjct: 8   PSPCYIMEEELLRKNLCLIKSVADRAGVEIILAFKSFAMWRSFPIFREYVEHSTASSVYE 67

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHKKIGL 120
             L  E+FG + H Y+ AY + +   ++     I FN+++Q  +F     A+      G+
Sbjct: 68  ARLALEEFGSKAHTYSPAYTEQDFPEIMRCSSHITFNSMAQFRRFYPMTVAEGSGISCGI 127

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP  S  +  L +P  P +R G       ++  K + G   H +CE+ SF      L+
Sbjct: 128 RVNPEYSEVETELYNPCAPGTRFGMTADLLPDTLPKGIEGFHCHCHCESSSFE-LERTLQ 186

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239
           ++E+++  +  QI+W++LGGG   T KDY  +   + L++   +Y   QI LEPG A   
Sbjct: 187 HLEEKYSRWFPQIKWLNLGGGHLMTRKDYDTEHLIKLLQDLKARYPHLQIILEPGSAFTW 246

Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCG 294
            T  L + V+DI E+      + + S   H+PD L       +      N G +   + G
Sbjct: 247 QTGVLTSEVVDIVESRGIKTAILNVSFTCHMPDCLEMPYQPAVRGAEMGNEGEFIYRLGG 306

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            SCL+GD  G + F+  ++IG+RI FED+  Y + + N FNGI+ P IA+   +G  +  
Sbjct: 307 NSCLSGDYMGLWSFDHELQIGERIVFEDMIHYTMVKTNMFNGIHHPAIALWTKEGKAEIY 366

Query: 355 REFSYNDYYNNLS 367
           ++FSY DY + +S
Sbjct: 367 KQFSYEDYRDRMS 379


>gi|167762855|ref|ZP_02434982.1| hypothetical protein BACSTE_01213 [Bacteroides stercoris ATCC
           43183]
 gi|167699195|gb|EDS15774.1| hypothetical protein BACSTE_01213 [Bacteroides stercoris ATCC
           43183]
          Length = 381

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 121/373 (32%), Positives = 195/373 (52%), Gaps = 9/373 (2%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+++++ L  NL     +   AGV+++LA K FA W  F    +Y++ +T+SS+YE
Sbjct: 10  PSPCYIMEEELLRKNLTLIKSVADRAGVEIILAFKSFAMWRSFPIFREYVEHSTASSVYE 69

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGL 120
             L  E+FG   H Y+ AY + +   ++     I FN+++Q  +F     A       G+
Sbjct: 70  ARLALEEFGSRAHTYSPAYTEADFPEIMRCSSHITFNSLAQFRRFYPMIQAAGQDISCGI 129

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP  S  +  L +P  P +R G   +   +   + ++G   H +CE+ S+      L+
Sbjct: 130 RVNPEYSEVETELYNPCAPGTRFGVMAEQLPDVLPQGIDGFHCHCHCESSSYE-LERTLE 188

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239
           ++E +F  +  QI+W++LGGG   T KDY V+   + L+   E+Y   +I LEPG A   
Sbjct: 189 HLEAKFSRWFPQIKWLNLGGGHLMTRKDYDVEHLIRLLRGLKERYPHLRIILEPGSAFTW 248

Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT----GPYTAMVCG 294
            T  L + V+DI EN      + + S   H+PD L       +        G Y   + G
Sbjct: 249 QTGVLASEVVDIVENRGIRTAILNVSFTCHMPDCLEMPYQPAVRGAEMGDGGAYVYRLGG 308

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            SCL+GD  G + F+  ++IG+RI FED+  Y + + N FNGI+ P IA+   +G  +  
Sbjct: 309 NSCLSGDYMGLWSFDHELQIGERIIFEDMIHYTMVKTNMFNGIHHPAIAMWTKEGKAEIF 368

Query: 355 REFSYNDYYNNLS 367
           R+FSY DY N +S
Sbjct: 369 RKFSYEDYRNRMS 381


>gi|260642514|ref|ZP_05416160.2| carboxynorspermidine decarboxylase [Bacteroides finegoldii DSM
           17565]
 gi|260621759|gb|EEX44630.1| carboxynorspermidine decarboxylase [Bacteroides finegoldii DSM
           17565]
          Length = 380

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 120/373 (32%), Positives = 194/373 (52%), Gaps = 9/373 (2%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+++++ L  NL     +   AGV+++LA K FA W  F    +Y+  +T+SS+YE
Sbjct: 9   PSPCYIMEEELLRKNLTLIKSVADRAGVEIILAFKSFAMWRSFPIFREYIRHSTASSVYE 68

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHKKIGL 120
             L  E+FG + H Y+ AY + +   ++     I FN+++Q  +F      +      G+
Sbjct: 69  ARLALEEFGSKAHTYSPAYTEQDFPEIMRCSSHITFNSMAQFERFYSMTVTEGSGISCGI 128

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP  S  +  L +P  P +R G       E+  + + G   H +CE+ S+      L+
Sbjct: 129 RVNPEYSEVETELYNPCAPGTRFGITADLLPETLPQGIEGFHCHCHCESSSYE-LERTLE 187

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239
           ++E +F  +  QI+W++LGGG   T KDY  +   + LKE   +Y   QI LEPG A   
Sbjct: 188 HLESKFSRWFPQIKWLNLGGGHLMTRKDYDTEHLIKLLKELRTRYPHLQIILEPGSAFTW 247

Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATI----YPNTGPYTAMVCG 294
            T  L + V+DI E+      + + S   H+PD L       +      N G Y   + G
Sbjct: 248 QTGVLASEVVDIVESRGIKTAILNVSFTCHMPDCLEMPYQPAVSGAEMGNEGKYIYRLGG 307

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            SCL+GD  G + F+  ++IG+RI FED+  Y + + N FNGI+ P IA+   +G  +  
Sbjct: 308 NSCLSGDYMGLWSFDHKLQIGERIVFEDMIHYTMVKTNMFNGIHHPAIAIWTKEGKAEIY 367

Query: 355 REFSYNDYYNNLS 367
           ++FSY DY + +S
Sbjct: 368 KQFSYEDYRDRMS 380


>gi|299856844|pdb|3MT1|A Chain A, Crystal Structure Of Putative Carboxynorspermidine
           Decarboxylase Protein From Sinorhizobium Meliloti
 gi|299856845|pdb|3MT1|B Chain B, Crystal Structure Of Putative Carboxynorspermidine
           Decarboxylase Protein From Sinorhizobium Meliloti
          Length = 365

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 209/366 (57%), Positives = 262/366 (71%), Gaps = 2/366 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TPYYLIDK KL  N +   ++R+ +G K LLALKCFA W +FD    Y DGTTSSSL+
Sbjct: 2   IETPYYLIDKAKLTRNXERIAHVREKSGAKALLALKCFATWSVFDLXRDYXDGTTSSSLF 61

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG E+FG ETHAY+VAY D EID V+S+ D IIFN++SQL +F DKA       GLR
Sbjct: 62  EVRLGRERFGKETHAYSVAYGDNEIDEVVSHADKIIFNSISQLERFADKA--AGIARGLR 119

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP VS S F LADP RPFSRLGE    K+E     +NG   HNNCENK F  F   L  
Sbjct: 120 LNPQVSSSSFDLADPARPFSRLGEWDVPKVERVXDRINGFXIHNNCENKDFGLFDRXLGE 179

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           IE+ FG  I +++W+SLGGGIHFT  DYPV  F  RL+ FS++Y VQIYLEPGEA +T +
Sbjct: 180 IEERFGALIARVDWVSLGGGIHFTGDDYPVDAFSARLRAFSDRYGVQIYLEPGEASITKS 239

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGD 301
           TTL  TVLD   N KNL IVDSS+EAH  D L+Y+E+A + PN G ++  +CG+SCLAGD
Sbjct: 240 TTLEVTVLDTLYNGKNLAIVDSSIEAHXLDLLIYRETAKVLPNEGSHSYXICGKSCLAGD 299

Query: 302 IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361
           +FGEF F + +K+GDRISF+D AGY   +KNWFNG+  P IA++ +DG+++ +REF+Y D
Sbjct: 300 VFGEFRFAEELKVGDRISFQDAAGYTXVKKNWFNGVKXPAIAIRELDGSVRTVREFTYAD 359

Query: 362 YYNNLS 367
           Y  +LS
Sbjct: 360 YEQSLS 365


>gi|317152607|ref|YP_004120655.1| carboxynorspermidine decarboxylase [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316942858|gb|ADU61909.1| carboxynorspermidine decarboxylase [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 396

 Score =  261 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 134/384 (34%), Positives = 202/384 (52%), Gaps = 19/384 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTP +++D+  L +NLD    +R+ AG K+LLALKCFA    F  L   +DG  +SS +
Sbjct: 14  VKTPCFVVDEGLLRDNLDILASVRQRAGCKVLLALKCFAMHSTFPLLAPQLDGVCASSPH 73

Query: 62  EVMLGHEKFGG-------ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK---- 110
           E  LG E+F         E H +   + + +I  +    D I+FN+ +QL++F+      
Sbjct: 74  EARLGCEEFAPHCRPGTGEVHTFAAGFSEADIRDLCQTSDHIVFNSFAQLDRFRPLVREL 133

Query: 111 --AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE 168
             A     ++ LRINP  S     + DP  P SRLG +      + +  V GL +HN CE
Sbjct: 134 AEANGRAIELALRINPEHSEGATPIYDPCAPGSRLGIRRAHFDPANLDGVTGLHWHNLCE 193

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
                C    +  +E  F   + ++ +++ GGG H T   Y V    + +  F EK+ V+
Sbjct: 194 QD-ADCLERTVAAVEASFADVLPRMRYVNFGGGHHITRPGYDVDLLVRIITRFKEKWGVE 252

Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PN 284
           +YLEPGEA+  N   L TTVLD+     ++VI+DS+V  H+PD +       I     P 
Sbjct: 253 VYLEPGEAVALNAGYLVTTVLDVIRADMDIVIMDSAVPCHMPDVIEMPYRPHIVGSGEPG 312

Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI-A 343
              +T  + G SCLAGD+ GE+ F+ P   GDR+ F D+A Y++ + N FNGI +P+I  
Sbjct: 313 DKAWTCRIGGPSCLAGDVAGEYSFDTPPMTGDRLVFTDMAIYSMVKTNTFNGIQLPSIRI 372

Query: 344 VKNVDGTIKAIREFSYNDYYNNLS 367
            +   G +  +R F Y D+ N LS
Sbjct: 373 FRPQTGEMVTVRSFGYQDFKNRLS 396


>gi|326575703|gb|EGE25626.1| carboxynorspermidine decarboxylase [Moraxella catarrhalis CO72]
          Length = 400

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 184/382 (48%), Positives = 248/382 (64%), Gaps = 16/382 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TPYYL+D++ +++NL     +   +G K LLALKCFA WG+F+++  Y+ GTTSSSL 
Sbjct: 19  IQTPYYLLDERAIIDNLSVTQKVCHESGAKALLALKCFATWGVFESMQPYLHGTTSSSLK 78

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG E FGGETHAY+VAY D EI  VL  CD IIFN+++QL +F   A   +  +GLR
Sbjct: 79  EVRLGKECFGGETHAYSVAYADHEIKEVLDYCDKIIFNSINQLKRFGQLAHDKNIPVGLR 138

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP  S S FI+ADP RPFSRLGE   + I +    + G+M HNNCEN  F  FS  L +
Sbjct: 139 LNPQTSNSSFIIADPARPFSRLGEYDVESIMAIADQITGVMIHNNCENTDFEAFSQSLTD 198

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           IE  FG    ++EWIS GGGIH+ D++YP+  F  RLK FSE Y VQIYLEPGEA V   
Sbjct: 199 IENHFGELFHRLEWISFGGGIHYIDQNYPLDKFINRLKNFSETYGVQIYLEPGEASVHQG 258

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT---------------- 285
             L T+VLD+  N K L +VD+S+EAH+ D L+Y++S+ +                    
Sbjct: 259 AVLVTSVLDVMYNNKPLAVVDASIEAHMLDLLIYRQSSPLAYVNDTAYDITGADFDGTSA 318

Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
              +  + G+SCLAGDIFG++   +P+KIGD+++F + A Y + +KNWFNG++MP+I + 
Sbjct: 319 DETSVRIYGKSCLAGDIFGDYTLNEPLKIGDKVAFGNAAAYTMVKKNWFNGVDMPSIVII 378

Query: 346 NVDGTIKAIREFSYNDYYNNLS 367
             DG I   R+F Y DY  +LS
Sbjct: 379 RQDGKIMIQRQFDYEDYKASLS 400


>gi|325284224|ref|YP_004256765.1| carboxynorspermidine decarboxylase [Deinococcus proteolyticus MRP]
 gi|324316033|gb|ADY27148.1| carboxynorspermidine decarboxylase [Deinococcus proteolyticus MRP]
          Length = 410

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 125/388 (32%), Positives = 214/388 (55%), Gaps = 23/388 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           I +P +++D+ +L  NL    Y+++ +G ++++A K F+ W  F  L +Y   G T+SSL
Sbjct: 24  IPSPAFVLDESRLRRNLALISYVQEKSGAQIIVAFKGFSMWSTFPILREYGITGATASSL 83

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK---- 116
            EV+L  E+  GE HAY  AY + +   +L   D I+FN+V Q  +F ++ +   +    
Sbjct: 84  NEVILADEEMQGEVHAYAPAYSEEDFPEILRRSDHIVFNSVQQWERFAEQVEATRQEGRT 143

Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175
              G+R+NP  +  +  L +P  PFSRLG   ++  ++    ++GL FH  CE K     
Sbjct: 144 IHAGIRVNPEYAEVETDLYNPAGPFSRLGVTRREFPDTLPAGIDGLHFHTLCE-KDSDTL 202

Query: 176 SAMLKNIEKEFGHFIT--QIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
              L+ +E++FG F+   QI+W++ GGG   T + Y ++   + ++ F EK++V + LEP
Sbjct: 203 ERTLEVLEEKFGEFLASEQIKWVNFGGGHLMTREGYDIERLIRVVRAFREKWNVHVILEP 262

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP------ 287
           G A    T  L ++VLD+  N+K+ V++D SV AH+PD L       I     P      
Sbjct: 263 GSAFGWQTGWLVSSVLDVVHNVKDAVLLDVSVSAHMPDVLEMPYRPRILGAGDPPSDDHR 322

Query: 288 --------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                   +  ++ G +CLAGD+ GE+ F +P+K+G R+ F+D+  Y + +  +FNG+  
Sbjct: 323 EAEDVPAGHPYIIGGTTCLAGDVVGEYVFPQPLKVGSRVVFDDMIHYTMVKTTFFNGVKH 382

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNNLS 367
           P I + + DG+ + ++ F Y ++   LS
Sbjct: 383 PDIGILHADGSYERVKVFGYEEFKAKLS 410


>gi|319956673|ref|YP_004167936.1| carboxynorspermidine decarboxylase [Nitratifractor salsuginis DSM
           16511]
 gi|319419077|gb|ADV46187.1| carboxynorspermidine decarboxylase [Nitratifractor salsuginis DSM
           16511]
          Length = 389

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 138/372 (37%), Positives = 211/372 (56%), Gaps = 8/372 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P +++++  L  NL     I++  GVK+LLALK +A W  F  + +Y+DG  +S L 
Sbjct: 18  LPSPCWVLEEHLLEYNLQILSAIKEATGVKILLALKGYALWHSFPLVREYLDGCCASGLC 77

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHKKIG 119
           E  L  E+FG E H Y+ A+K+ EID +      ++FN+ +QL +F    KA      +G
Sbjct: 78  EARLAAEEFGKEVHTYSPAFKEEEIDEIARLSHHLVFNSPAQLQRFGAAAKAANPALSLG 137

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           LR+NP  S +   L +P   +SRLG    D  E+ +  + GL FH  CE         +L
Sbjct: 138 LRVNPEYSEAPVELYNPCGAYSRLGTLAGDLDEASVDQIEGLHFHALCEQD-ASALEGVL 196

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238
              E++FG ++ Q++W++ GGG H T  DY  +     LK+F  ++   ++YLEPGEA+ 
Sbjct: 197 GVFEEKFGRWLPQLKWVNFGGGHHITRSDYDREKLIALLKDFRRRHPHLELYLEPGEAVG 256

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----TGPYTAMVCG 294
             T  L  TVLDI  N  ++ I+D+S EAH+PD ++    A +          YT  + G
Sbjct: 257 WETGPLVATVLDIVHNGIDIAILDTSAEAHMPDTIIMPYRAQVRGAGKAGEKSYTYRLGG 316

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            +CLAGDI G++ F++P+KIGDRI FED   Y + +   FNGI +P+IA  + DG++   
Sbjct: 317 NTCLAGDIMGDYSFDRPLKIGDRILFEDQMHYTMVKATTFNGIPLPSIATLHRDGSLSID 376

Query: 355 REFSYNDYYNNL 366
           R F YND+ + L
Sbjct: 377 RRFGYNDFKSRL 388


>gi|229825454|ref|ZP_04451523.1| hypothetical protein GCWU000182_00814 [Abiotrophia defectiva ATCC
           49176]
 gi|229790017|gb|EEP26131.1| hypothetical protein GCWU000182_00814 [Abiotrophia defectiva ATCC
           49176]
          Length = 401

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 127/378 (33%), Positives = 196/378 (51%), Gaps = 13/378 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTP Y+ID+ K+  N      +    G K+LLA K F+ +  +  + +Y+ G T+S L+
Sbjct: 25  LKTPCYVIDEAKIEENCKILKAVMDETGAKILLAQKAFSGFYFYPLIGKYLAGATASGLF 84

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LG E+   E H ++ AYKD +++ +   CD IIFN+V+QL K+K         IG+R
Sbjct: 85  EAKLGAEEMKKENHIFSPAYKDEDMEEITKICDHIIFNSVNQLKKYKKYCVDKGVSIGIR 144

Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSFLC 174
           INP  S      + DP    SRLG        +       +  V+GL FH  CE      
Sbjct: 145 INPEFSTQEGHEIYDPCASGSRLGITLHTLENAITEESSLLDGVDGLHFHTLCEQG-AEP 203

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
               L+ + K FG  +  ++W++ GGG H T +DY  +   + +KE    + V++YLEPG
Sbjct: 204 LRDTLEVVYKNFGKHLKNMKWLNFGGGHHITREDYNRELLIKCIKEAKALFDVEVYLEPG 263

Query: 235 EAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----TGPYT 289
           EA+  N     TT+LD  +      +I+D S   H+PD +       ++ +       YT
Sbjct: 264 EAVALNAGYSVTTILDKTTSGDTTNLILDISAACHMPDVIEMPYRPPLFTSGEAGEKKYT 323

Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349
             +   +CLAGDI G+F F++   IGD + F D+A Y+  + N FNG+ +P +AV   DG
Sbjct: 324 YRLGSCTCLAGDIIGDFSFDEEKNIGDMLIFGDMAIYSFVKNNTFNGMPLPDLAVLKKDG 383

Query: 350 TIKAIREFSYNDYYNNLS 367
            ++ I+ F Y D+   LS
Sbjct: 384 KVENIKSFGYGDFKERLS 401


>gi|103486686|ref|YP_616247.1| Orn/DAP/Arg decarboxylase 2 [Sphingopyxis alaskensis RB2256]
 gi|98976763|gb|ABF52914.1| Orn/DAP/Arg decarboxylase 2 [Sphingopyxis alaskensis RB2256]
          Length = 390

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 112/373 (30%), Positives = 185/373 (49%), Gaps = 8/373 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P +++D  K+ +NL    +I   +G ++L ALK F+ W +  T+ +Y+DG  +S LY
Sbjct: 19  VPSPAFVVDAAKIRSNLALLRHIGDASGARVLAALKAFSMWSLGPTVAEYLDGVCASGLY 78

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-----AQKLHK 116
           E  LG  ++GGE   Y   YK+ ++  + +  D +IFN+  Q+ +F+       A+    
Sbjct: 79  EAKLGRAEYGGEVATYCAGYKEADLPEIAALSDHLIFNSPGQIARFRPLLDDLRAKGERF 138

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
            +GLR+NP  S  +    DP  P SRLG      +   +  V+G+  H+ CE        
Sbjct: 139 DVGLRVNPMHSEGEVAKYDPAAPCSRLGFPITQLLPEHMDGVDGVHMHSLCEQDFPPLER 198

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
                +      F  Q++WI+ GGG H T  DY V D    LK+        + +EPGEA
Sbjct: 199 TWSA-VHPMLRPFFGQLKWINFGGGHHVTRADYQVDDLIAFLKQVRAATDCDVMIEPGEA 257

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA-MVCGR 295
           I  +   L   +LD+  N  ++ I D S   H+PD +       +           + G 
Sbjct: 258 IALDAGILVGELLDLFHNGMSIGITDISATCHMPDVIEAPYRPAMLGEGSEGAVTRLGGP 317

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-GTIKAI 354
           SCLAGD+ G++      +IG R +F D A Y++ + N FNG+ +P+I + + +   ++ I
Sbjct: 318 SCLAGDVIGDYRLPGGARIGQRFAFLDQAHYSMVKTNTFNGVPLPSIWLWDSETDELELI 377

Query: 355 REFSYNDYYNNLS 367
           R+F + D+   LS
Sbjct: 378 RQFGFEDFKTRLS 390


>gi|78777378|ref|YP_393693.1| carboxynorspermidine decarboxylase [Sulfurimonas denitrificans DSM
           1251]
 gi|78497918|gb|ABB44458.1| Carboxynorspermidine decarboxylase [Sulfurimonas denitrificans DSM
           1251]
          Length = 382

 Score =  260 bits (663), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 142/377 (37%), Positives = 213/377 (56%), Gaps = 12/377 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TPYY+ D+  L  NL+   Y++K +G K++LALK FA W  F  + QY+ G T S L+
Sbjct: 7   ISTPYYMCDESLLRANLEILDYVQKQSGAKIILALKGFAMWSTFPLVKQYLRGCTCSGLH 66

Query: 62  EVMLGHEKFGGE-----THAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKL 114
           E +L  E+F  E      H Y+ A+KD +ID +    + I+FN+ +QL K+ D+      
Sbjct: 67  EALLAREEFAKEDKNLEVHTYSPAFKDEDIDEIARISNHIVFNSPTQLFKYCDRVKKINP 126

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174
           H  + LRINP  S S   + +P   +SRLG    +  E  +++++GL FH  CE      
Sbjct: 127 HVNLSLRINPEQSSSPKDIYNPCGLYSRLGTTLANFDERVLEHIDGLNFHALCEQD-VDA 185

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
              +L   E++F  +   +++I+ GGG H T K Y V    + +KEF  KY V++YLEPG
Sbjct: 186 LEDVLVAFEEKFSKYFKNMKYINFGGGHHITKKGYDVDKLIKIIKEFITKYDVEVYLEPG 245

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----TGPYTA 290
           EA+   T  L ++VLDI  N  ++ I+D+S EAH+PD L     A +  +       +T 
Sbjct: 246 EAVGWQTGVLVSSVLDIVHNGIDIAILDTSAEAHMPDTLAMPYRAMVRRSGEAGEKKHTY 305

Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGT 350
              G +CLAGDI G++ F+KP+ +GD++ FED   Y   +   FNGI +P++ +   D T
Sbjct: 306 RFGGNTCLAGDIMGDYSFDKPLYVGDKVIFEDQIHYTFVKNTTFNGIKLPSLVILREDKT 365

Query: 351 IKAIREFSYNDYYNNLS 367
           +  I+EF Y DY N LS
Sbjct: 366 LDVIKEFGYQDYRNRLS 382


>gi|157164290|ref|YP_001467543.1| carboxynorspermidine decarboxylase [Campylobacter concisus 13826]
 gi|112801111|gb|EAT98455.1| carboxynorspermidine decarboxylase [Campylobacter concisus 13826]
          Length = 379

 Score =  260 bits (663), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 143/372 (38%), Positives = 209/372 (56%), Gaps = 9/372 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           IKTP Y+ ++ K+  NL+   Y+++ +G K+L+ALK FA  G+ D +  Y+DG T S L+
Sbjct: 8   IKTPAYVCEEAKVRKNLELLKYVKEQSGAKILVALKGFAFSGVMDMVGSYLDGATCSGLH 67

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E     E   GE H Y+ A+KD + D +L     I FN+ +Q  KFK  A +     GLR
Sbjct: 68  EAKFASEYVKGEIHTYSPAFKDEDFDEILKISKHITFNSFAQWQKFKGIALQNGIICGLR 127

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP VS +     +P   FSRLG    +     +  + GL FH  CE +S      +L+ 
Sbjct: 128 VNPEVSLAPTDSYNPCAKFSRLGITKANFKPELLDGITGLHFHALCE-ESASSLQVVLEA 186

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            E++FG FI +++WI++GGG H T  DY V+   + ++ F EKY V++YLEPGEA+   T
Sbjct: 187 FEEKFGEFIPKMKWINMGGGHHITRADYDVELLIKIIRRFREKYGVEVYLEPGEAVGWQT 246

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY--PNTGPYTAMVCGRSCLA 299
             L ++VLDI  N K++ I+D+S EAH+PD +L      +      G +     G +CLA
Sbjct: 247 GFLISSVLDIVHNEKDIAILDTSAEAHMPDTVLMPYRPAVRGESKNGKFAYRFGGNTCLA 306

Query: 300 GDIFG------EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353
           GDI G      E+ F+  +KIGDR+ FED   Y I +   FNGI +P + +   +G IK 
Sbjct: 307 GDIVGLEAGDAEYKFDSELKIGDRVIFEDQIHYTIVKNTTFNGIKLPDLLLLKENGEIKM 366

Query: 354 IREFSYNDYYNN 365
           IRE  Y +Y   
Sbjct: 367 IRELDYEEYRRR 378


>gi|206603531|gb|EDZ40011.1| Diaminopimelate decarboxylase [Leptospirillum sp. Group II '5-way
           CG']
          Length = 414

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 61/385 (15%), Positives = 120/385 (31%), Gaps = 22/385 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P Y+  ++ L     +     ++    +  A+K      +   L +   G    S  
Sbjct: 25  VDSPVYIYSEKALREAYSSYQEAFQSHRTMIAYAMKANGNLQILSMLGKMGSGADVVSGG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116
           E+          +   +    K      +A+ +        +  +L++    A  + K  
Sbjct: 85  ELFRARRAGIPSDRIVFAGVGKTEGEMREAIDAGILMFNVESSMELDRLSRVASSMGKVA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNC-- 167
            + LR+NP V              S+ G      +E   +        + G+  H     
Sbjct: 145 PVALRVNPDVDPKTHPYISTGMKKSKFGIPVDQALEEYRRAARLPGIRIVGIHQHIGSQL 204

Query: 168 -ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSE 223
            E   F      +    +       ++ W+ +GGG+     +      ++    +    E
Sbjct: 205 TEISPFRDAFDRMVAFARLLKENGIEVSWLDVGGGLGIRYGNEKPPTPREVAHEILSRLE 264

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIY 282
             +V I LEPG +IV N   L T V  + E    +  + D+ +   +   L         
Sbjct: 265 GLNVGIILEPGRSIVGNAGILVTEVQYLKETSVKMFYIADAGMNDLIRPSLYGAFHDLWP 324

Query: 283 PNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
               P       + G  C  GD   +     PV+ GD ++      Y     + +N    
Sbjct: 325 VIKKPGNGKKGDLVGPVCETGDFLVQDRELPPVEPGDLLAVMSAGAYGFAMASNYNARPR 384

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
           P   + + D         +Y D   
Sbjct: 385 PAEVLVSGDRFSVIRARETYEDLIR 409


>gi|284162042|ref|YP_003400665.1| diaminopimelate decarboxylase [Archaeoglobus profundus DSM 5631]
 gi|284012039|gb|ADB57992.1| diaminopimelate decarboxylase [Archaeoglobus profundus DSM 5631]
          Length = 419

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 80/389 (20%), Positives = 136/389 (34%), Gaps = 29/389 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+  K KL  N++           ++L A+K      +   + ++  G    S  
Sbjct: 23  LGTPLYITSKAKLEENIEAYKRAF--PDAEILYAVKANNNLAIMRIIAKHGFGADVFSGG 80

Query: 62  EVMLGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           E+ +     F      +N     D EI+  +        +++ +L   +  A+K  K  +
Sbjct: 81  ELYMARLAGFPSNKLLFNGNSKSDEEIEMGIDCNVKFSVDSLDELYTIQKIAEKKGKIVE 140

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCENK 170
           I  R+NP +              S+ G      +E+  K V        G+  H   + K
Sbjct: 141 IAFRVNPDIDPKTHPKIATGLKTSKFGIPWDIALEAYKKAVELPNVKPVGIHCHIGSQIK 200

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
               F   L    ++  E      +I ++ +GGG+            +DF   +     +
Sbjct: 201 EIDPFVEALNRLFDLAVEIEKLGVEIRFLDIGGGLAIDYTGEGAPTPQDFANEILPVFNE 260

Query: 225 Y------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                    ++YLEPG ++V NTT L T V  + +  KN V VD+     +   L     
Sbjct: 261 RKKELNSDPKLYLEPGRSLVGNTTILLTKVNAVKKAYKNFVAVDAGFNLLIRPVLYNAYH 320

Query: 279 ----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
               A         T  + G  C +GDI  E      V+ GD I+  D   Y     + +
Sbjct: 321 RVAVANKMDKEAEETYTIVGPICESGDILAEDRKLPKVEKGDLIAIFDTGAYGFVMSSQY 380

Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYY 363
           NG       + +           SY D  
Sbjct: 381 NGRPRCAEVLVDGSRWYVVRERESYGDLI 409


>gi|307720965|ref|YP_003892105.1| carboxynorspermidine decarboxylase [Sulfurimonas autotrophica DSM
           16294]
 gi|306979058|gb|ADN09093.1| carboxynorspermidine decarboxylase [Sulfurimonas autotrophica DSM
           16294]
          Length = 379

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 148/377 (39%), Positives = 217/377 (57%), Gaps = 12/377 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y+ +++ L  NL    Y+++ +G K++LALK FA W  FD   +Y+ G T+S LY
Sbjct: 4   ISTPCYICEEELLEKNLKILEYVQQQSGAKIILALKGFAMWSTFDLAAKYLKGCTASGLY 63

Query: 62  EVMLGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKL 114
           E  L  E+F       E H Y+ AYK+ EI+ +    D I+FN+ +QL K+  K      
Sbjct: 64  EAKLAREEFCKYNKNAEVHTYSPAYKEEEIEEIAKISDHIVFNSPNQLQKYICKVKEINP 123

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174
           +  + LR+NP VS S   + +P   +SRLG   ++  E  +K ++GL FH  CE      
Sbjct: 124 NIHVSLRVNPEVSSSPVDIYNPCGLYSRLGTTLQNFDEKVLKYIDGLNFHALCEQN-ADA 182

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
              +L   E++F  + T +++I+ GGG H T KDY V+     +KEF  KY+V +YLEPG
Sbjct: 183 LEEVLAAFEEKFAKYFTNLKYINFGGGHHITKKDYDVEKLIWIIKEFRNKYNVDVYLEPG 242

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTA 290
           EA+   T  L +TVLD+ EN  N+ I+D+S EAH+PD L     A +      N   YT 
Sbjct: 243 EAVGWETGYLESTVLDVFENGMNIAILDTSAEAHMPDTLAMPYRAEVRGAGVANEKKYTY 302

Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGT 350
            + G +CLAGDI G++ F+ P+ +GD I FED   Y   +   FNG+ +P++A+K  +G 
Sbjct: 303 RLGGNTCLAGDIMGDYSFDAPLHVGDTIIFEDQIHYTFVKNTTFNGVKLPSLAIKRKNGE 362

Query: 351 IKAIREFSYNDYYNNLS 367
           I+ I+EF Y DY N LS
Sbjct: 363 IEIIKEFGYEDYKNRLS 379


>gi|146278915|ref|YP_001169074.1| carboxynorspermidine decarboxylase [Rhodobacter sphaeroides ATCC
           17025]
 gi|145557156|gb|ABP71769.1| carboxynorspermidine decarboxylase [Rhodobacter sphaeroides ATCC
           17025]
          Length = 365

 Score =  259 bits (661), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 194/366 (53%), Positives = 256/366 (69%), Gaps = 2/366 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MI+TP+YLID   L  N+     +R+ +G K LLALKCFA W  FD +  +MDGTTSSSL
Sbjct: 1   MIQTPFYLIDSASLKRNMAVIDRLREGSGAKALLALKCFATWPAFDCMRDHMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           YE+ LG EKFG ETHAY+VA+ D EID  +   D IIFN+V QL +F+D+        GL
Sbjct: 61  YELRLGREKFGKETHAYSVAWPDHEIDEAVGYADKIIFNSVGQLQRFRDR--TRGIARGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP +S S F LADP RPFSRLGE   +KIE+ + +++G+M H NCEN  F  F   L 
Sbjct: 119 RLNPGLSTSGFDLADPARPFSRLGEWSAEKIEAVLPDISGVMIHYNCENADFDLFDRQLA 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            IE  FG  + +++W+SLGGGIHFT + YPV     RLK F+  + VQ+YLEPGEA +T 
Sbjct: 179 EIEGRFGAILDRLDWVSLGGGIHFTGEGYPVDRLAARLKAFAAAHGVQVYLEPGEAAITR 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           + TL  TVLD+ +N K L IVDSSVEAH+ D L+Y++SA +  + G ++ MVCG+SCLAG
Sbjct: 239 SATLEVTVLDLLDNGKQLAIVDSSVEAHMLDLLIYRQSAKVEHDAGDHSYMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGEF F +P+K+GDR+S  D AGY + +KNWFNG+ MP+I ++  DG+++  REF Y 
Sbjct: 299 DIFGEFRFAEPLKVGDRLSIADAAGYTMVKKNWFNGVKMPSIVIREPDGSLRVAREFGYG 358

Query: 361 DYYNNL 366
           DY ++L
Sbjct: 359 DYASSL 364


>gi|332971104|gb|EGK10071.1| carboxynorspermidine decarboxylase [Psychrobacter sp. 1501(2011)]
          Length = 377

 Score =  259 bits (661), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 199/377 (52%), Positives = 259/377 (68%), Gaps = 10/377 (2%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           M+KTPYY ID   L  NL+    + + +G K LLALKCFA WG+FD +  Y+ GTTSSSL
Sbjct: 1   MLKTPYYQIDVAALKQNLEIVQRLCELSGAKALLALKCFATWGVFDEMKPYLHGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            EV LG E+FGGETHAY+VAY   EID VL+  D IIFN+ +QL+ FKDKA+     +GL
Sbjct: 61  NEVRLGKEEFGGETHAYSVAYGADEIDEVLTYADKIIFNSFNQLHAFKDKAKAQDVPVGL 120

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           RINP  S S FI+ADP RPFSRLGE   DKI+  IK++ G+M HNNCEN SF  FSA L+
Sbjct: 121 RINPKTSNSSFIIADPARPFSRLGEHDIDKIKPVIKDITGVMIHNNCENDSFEAFSASLE 180

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
           +IE +FG    Q+EW+SLGGGIHF   DYP++    RLK+FSEKY VQIYLEPGEA + +
Sbjct: 181 DIETKFGELFYQLEWVSLGGGIHFIAPDYPLEKLAARLKDFSEKYGVQIYLEPGEACIHD 240

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA----------TIYPNTGPYTA 290
              L TTVLD   N K L +VD+S+EAH+ D L+Y+E+A           +       + 
Sbjct: 241 AAKLVTTVLDTLHNGKPLAVVDASIEAHMLDLLIYRETAPLVQINEQSCHMTSQQTDDST 300

Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGT 350
           ++ G+SCLAGDIFGE+  EKP+ IGD+++F + AGY + +KNWFNG+ MP+I + +  G 
Sbjct: 301 IIYGKSCLAGDIFGEYALEKPLSIGDKVAFGNAAGYTMVKKNWFNGVAMPSIVICDEQGE 360

Query: 351 IKAIREFSYNDYYNNLS 367
           +K  + F Y D+ ++LS
Sbjct: 361 LKVQKTFGYEDFKSSLS 377


>gi|332559940|ref|ZP_08414262.1| carboxynorspermidine decarboxylase [Rhodobacter sphaeroides WS8N]
 gi|332277652|gb|EGJ22967.1| carboxynorspermidine decarboxylase [Rhodobacter sphaeroides WS8N]
          Length = 365

 Score =  259 bits (661), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 193/366 (52%), Positives = 258/366 (70%), Gaps = 2/366 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MI+TPYYLID  +L  N+     +R+ +G K LLALKCFA W  F+ +  +MDGTTSSSL
Sbjct: 1   MIQTPYYLIDADRLRQNMAVVDRLRQASGAKALLALKCFATWPAFEHMRDHMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           YE+ LG EKFG ETHAY+VA+ D EID  +   D IIFN+V QL +F+D+   +    GL
Sbjct: 61  YELRLGREKFGKETHAYSVAWPDHEIDEAVGYADKIIFNSVGQLQRFRDRTGGIA--RGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP +S S F LADP RPFSRLGE   +KIE+ + +++G+M H NCEN     F   L 
Sbjct: 119 RLNPGLSTSGFDLADPARPFSRLGEWSAEKIEAVLPDISGVMIHYNCENADVDLFDRQLS 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            IE  FG  + +++W+SLGGGIHFT + YPV     RLK F+  + VQ+YLEPGEA +T 
Sbjct: 179 EIEGRFGAILDRLDWVSLGGGIHFTGEGYPVDRLAARLKAFAAAHGVQVYLEPGEAAITR 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           + TL  TVLD+ +N K L IVDSSVEAH+ D L+Y++SA + P+ G ++ MVCG+SCLAG
Sbjct: 239 SATLEVTVLDLLDNGKQLAIVDSSVEAHMLDLLIYRQSAKVEPDAGDHSYMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGEF F +P+++GDR+S  D AGY + +KNWFNG+ MP+I ++  DG+++  REF Y 
Sbjct: 299 DIFGEFRFAQPLQVGDRLSIADAAGYTMVKKNWFNGVKMPSIVIREPDGSLRVAREFGYG 358

Query: 361 DYYNNL 366
           DY ++L
Sbjct: 359 DYASSL 364


>gi|218132554|ref|ZP_03461358.1| hypothetical protein BACPEC_00413 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992280|gb|EEC58283.1| hypothetical protein BACPEC_00413 [Bacteroides pectinophilus ATCC
           43243]
          Length = 420

 Score =  259 bits (661), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 131/410 (31%), Positives = 211/410 (51%), Gaps = 44/410 (10%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           ++KTP Y++D++ L +NL+    + K+ G ++LLA K F+ +  +  + +Y+ GTT+SSL
Sbjct: 12  LVKTPAYVVDERLLRDNLEILADVIKDTGCRILLAQKGFSMFCEYPLIGRYLCGTTASSL 71

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH----- 115
           YE  LG E   GETH +  AY++ E   +LS CD ++FN++ Q  KF+ K  +       
Sbjct: 72  YEARLGKEHMQGETHIFAPAYREEEFPQILSVCDHVVFNSLEQWIKFRTKVWECDNRGVV 131

Query: 116 -----------------KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI------E 152
                               G+R+NP  +  +  + +P    SRLG    +         
Sbjct: 132 PAPFMMDVHGDEHASQVHSCGIRVNPGYAEVEHEIYNPCCAGSRLGSTLAEFEETLSKYP 191

Query: 153 SEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK 212
             +  ++GL FH  CE  S      +L +    FG +I  ++W++ GGG H T KDY ++
Sbjct: 192 DALDGISGLHFHALCEQNS-DTLERVLDHFLDSFGKYIEGMKWVNFGGGHHITRKDYDIE 250

Query: 213 DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE------ 266
              + ++   +++ V +YLEPGEA+  NT  L +TVLD+          D  VE      
Sbjct: 251 LLKKCIRRVQDEFGVTVYLEPGEAVALNTGYLVSTVLDVQNKTFYTTDGDREVEMTPVIL 310

Query: 267 -----AHVPDYLLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDR 317
                 H+PD L       I  +       Y   + G +CLAGDI G++ F+ P+K GDR
Sbjct: 311 DTSAACHMPDVLEMPYRPYILDSGMPGEKQYNYRLGGNTCLAGDIIGDYSFDAPLKAGDR 370

Query: 318 ISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367
           + F D+A Y++ + N FNGI +P IA  ++DG ++ ++EF Y D+ + LS
Sbjct: 371 LVFTDMAHYSMVKNNTFNGIGLPAIAACDMDGRLRVVKEFGYEDFKSRLS 420


>gi|296283678|ref|ZP_06861676.1| carboxynorspermidine decarboxylase [Citromicrobium bathyomarinum
           JL354]
          Length = 390

 Score =  258 bits (660), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 121/373 (32%), Positives = 186/373 (49%), Gaps = 8/373 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP +++D  KL  N      IR  A +K+L ALK F+ W     + +Y+DG  +S L+
Sbjct: 19  VDTPAFVVDAAKLRENCRILAEIRDEAEIKMLSALKAFSMWSTAPIIGEYLDGVCTSGLW 78

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-----AQKLHK 116
           E  L  E + GE   Y  AYK  E++ V    D +IFN+  Q+ +         A     
Sbjct: 79  EARLASEFYDGEISTYCAAYKPEELEEVARLSDHVIFNSPGQMRRAALILEQAKASGGAF 138

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
            +GLRINP V   +    DP+ P SRLG       E  ++ V G+ FHN CE   F    
Sbjct: 139 DVGLRINPQVPTGEVPRYDPSSPGSRLGFPLSQLTEEHMEGVEGIHFHNLCEQG-FEPLH 197

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
                +      +  Q++WI++GGG H T  DY  ++  + L++  +    +IYLEPGEA
Sbjct: 198 RTWDRVFDAIEPYFGQLKWINMGGGHHITRADYEREELIEFLRDAKDDTGAEIYLEPGEA 257

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT-GPYTAMVCGR 295
           +  +   L  T+LD  EN   + I D S   H+PD +       +     G     + G 
Sbjct: 258 VALDAGILVGTILDTGENDGPIAITDISATCHMPDVIEAPYRPAMLHEKAGEPPVRLGGP 317

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-GTIKAI 354
           SCLAGD+ GE+    P + G RI+F D A Y++ + N FNG+ +P+I + + +   ++ +
Sbjct: 318 SCLAGDVIGEYSLPVPNEAGQRIAFLDQAHYSMVKTNTFNGVPLPSIWLWDSETDVLECV 377

Query: 355 REFSYNDYYNNLS 367
           + F Y ++ N LS
Sbjct: 378 KRFGYEEFRNRLS 390


>gi|87199809|ref|YP_497066.1| Orn/DAP/Arg decarboxylase 2 [Novosphingobium aromaticivorans DSM
           12444]
 gi|87135490|gb|ABD26232.1| carboxynorspermidine decarboxylase [Novosphingobium aromaticivorans
           DSM 12444]
          Length = 399

 Score =  258 bits (660), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 120/382 (31%), Positives = 188/382 (49%), Gaps = 17/382 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P +++D  +L  NL     +R  AG+K+L ALK F+ W +   + +Y+DG  +S L+
Sbjct: 19  VDSPAFVVDAARLRANLAVLADVRDRAGIKVLAALKAFSMWKVAPIVGRYLDGVCTSGLW 78

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF-----KDKAQKLHK 116
           E +L  E + GE   Y  AYK  ++  +L   D +IFN+  Q ++F       + +    
Sbjct: 79  EALLAAEHYQGEIATYCAAYKAEDMPEILRLSDHVIFNSPGQYDRFKAEIANARTRGESF 138

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
            IGLRINP  +  +    DP  P SRLG      +    + V+GL FH  CE   F    
Sbjct: 139 DIGLRINPLHAEGEVPRYDPCAPHSRLGFPVDQLVPEHFEGVSGLHFHTLCEQD-FQPLE 197

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
              + +E     +  Q++W++ GGG H T  DY   D    L++   +   +IYLEPGEA
Sbjct: 198 RTWQALEPRIAPYFGQLKWLNFGGGHHITRADYQRDDLVAFLRDVKARTGCEIYLEPGEA 257

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----------TG 286
           +  +   L  TVLD   N   L I D S   H+PD +       +              G
Sbjct: 258 VALDAGILVGTVLDTHWNGMQLAITDISATCHMPDVIEAPYRPAMLGEFPIDEYEDGGEG 317

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
           P    + G SCLAGD+ G++    P + G R +F D A Y++ +   FNG+ +P+I + +
Sbjct: 318 PAPVRLGGPSCLAGDVIGDYRLPVPTEPGARFAFLDQAHYSMVKTTTFNGVPLPSIWLWD 377

Query: 347 VD-GTIKAIREFSYNDYYNNLS 367
            +   ++ +R FSY D+ + LS
Sbjct: 378 SETDDLEKVRTFSYEDFRDRLS 399


>gi|77462013|ref|YP_351517.1| putative carboxynorspermidine decarboxylase protein [Rhodobacter
           sphaeroides 2.4.1]
 gi|77386431|gb|ABA77616.1| putative carboxynorspermidine decarboxylase protein [Rhodobacter
           sphaeroides 2.4.1]
          Length = 365

 Score =  258 bits (660), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 192/366 (52%), Positives = 258/366 (70%), Gaps = 2/366 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MI+TPYYLID  +L  N+     +R+ +G K LLALKCFA W  F+ +  +MDGTTSSSL
Sbjct: 1   MIQTPYYLIDADRLRQNMAVVDRLRQASGAKALLALKCFATWPAFEHMRDHMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           YE+ LG EKFG ETHAY+VA+ D EID  +   D IIFN+V QL +F+++   +    GL
Sbjct: 61  YELRLGREKFGKETHAYSVAWPDHEIDEAVGYADKIIFNSVGQLARFRNRTGGIA--RGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP +S S F LADP RPFSRLGE   +KIE+ + +++G+M H NCEN     F   L 
Sbjct: 119 RLNPGLSTSGFDLADPARPFSRLGEWSAEKIEAVLPDISGVMIHYNCENADVDLFERQLS 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            IE  FG  + +++W+SLGGGIHFT + YPV     RLK F+  + VQ+YLEPGEA +T 
Sbjct: 179 EIEGRFGAILDRLDWVSLGGGIHFTGEGYPVDRLAARLKAFAAAHGVQVYLEPGEAAITR 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           + TL  TVLD+ +N K L IVDSSVEAH+ D L+Y++SA + P+ G ++ MVCG+SCLAG
Sbjct: 239 SATLEVTVLDLLDNGKQLAIVDSSVEAHMLDLLIYRQSAKVEPDAGDHSYMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGEF F +P+++GDR+S  D AGY + +KNWFNG+ MP+I ++  DG+++  REF Y 
Sbjct: 299 DIFGEFRFAQPLQVGDRLSIADAAGYTMVKKNWFNGVKMPSIVIREPDGSLRVAREFGYG 358

Query: 361 DYYNNL 366
           DY ++L
Sbjct: 359 DYASSL 364


>gi|295104725|emb|CBL02269.1| carboxynorspermidine decarboxylase [Faecalibacterium prausnitzii
           SL3/3]
          Length = 403

 Score =  258 bits (660), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 127/378 (33%), Positives = 190/378 (50%), Gaps = 14/378 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP YL+D+ +L  N +  L +++  G ++LLA K F+ + ++  L  Y+ GT +S LY
Sbjct: 24  LPTPCYLLDEAQLRRNGEILLGVQQRTGCRILLAQKAFSNFNVYPVLAPYLAGTEASGLY 83

Query: 62  EVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           E  LG E+    E H +  AY+  E + +L   D I+FN+ SQL KF   A+   K IGL
Sbjct: 84  ESRLGREELPEKENHVFCAAYRTDEFEELLQYADHIVFNSPSQLAKFGPAAKAAGKSIGL 143

Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSFL 173
           RINP  S      + DP  P SRLG        +   +      ++GL FH  CE     
Sbjct: 144 RINPECSTQEGHEIYDPCAPGSRLGTTRAQWDAAVAAHPELPALLDGLHFHTLCEQD-AD 202

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
             +  L  +EK+F   + +++W++ GGG H T   Y +      +    +KY VQ+YLEP
Sbjct: 203 ALAVTLAAVEKKFADLLPRMKWLNFGGGHHITRPGYALATLENCILSVRQKYGVQVYLEP 262

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPN----TGPY 288
           GEA   N   L TTVLD   N    + + D S   H PD +       +          +
Sbjct: 263 GEAWALNAGYLVTTVLDTLRNGDTSLAILDMSAACHTPDVIEMPYRPPLLDAGEAGEKAH 322

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348
           T  + G +CLAGDI G++ F+ P+  GD++ F D+A Y   + N FNG+ +P I +   D
Sbjct: 323 TVRLGGPTCLAGDIIGDYSFDAPLAEGDKLIFGDMAIYTTCKNNTFNGMPLPPIWLLGAD 382

Query: 349 GTIKAIREFSYNDYYNNL 366
           G  + +  F Y D+   L
Sbjct: 383 GNCRELVHFGYQDFKMRL 400


>gi|284049214|ref|YP_003399553.1| Orn/DAP/Arg decarboxylase 2 [Acidaminococcus fermentans DSM 20731]
 gi|283953435|gb|ADB48238.1| Orn/DAP/Arg decarboxylase 2 [Acidaminococcus fermentans DSM 20731]
          Length = 404

 Score =  258 bits (659), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 117/376 (31%), Positives = 192/376 (51%), Gaps = 12/376 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y++DK  L  N +    ++   G ++LLA K F+ + ++  L  Y+ GT +S LY
Sbjct: 28  LGTPCYILDKAALRRNGEILKGVQDRTGCRILLAQKAFSNYDLYPVLEPYLAGTEASGLY 87

Query: 62  EVMLGHEKFGG-ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           E  LG E   G E H +  AY+  +++ V    D I+FN+  QL  +   A+K  K +GL
Sbjct: 88  EAKLGREAMPGKEVHVFCGAYRADQMEEVCQVADHIVFNSPRQLKTYGPMAKKAGKSVGL 147

Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNV----NGLMFHNNCENKSFLCF 175
           RINP  S      + DP  P SR+G            ++    +G+ FH  CE  +    
Sbjct: 148 RINPECSTQEGHAIYDPCAPGSRMGTTRAQWDAWMTPDLVELLDGIHFHTLCEQDADD-L 206

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
              L  +E++FG  + +++W+++GGG H T   Y +    + ++   + + V +YLEPGE
Sbjct: 207 KKTLDAVEEKFGDVLPKMKWVNMGGGHHITRPGYHIPLLEECIRRAQKAWDVTVYLEPGE 266

Query: 236 AIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTA 290
           A   N   L T VLD+       + I+D+S   H+PD L       +     P     T 
Sbjct: 267 ACALNAGYLATRVLDVVENGDVKIAILDTSAACHMPDVLEMPYRPPLYGAGEPGERAVTW 326

Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGT 350
            +   +CL+GD+ G++ F+  +++GD + F D+A Y   + N FNG+ +P I V   DG+
Sbjct: 327 RLGSGTCLSGDVAGDYSFDGDLEVGDMLLFGDMAIYTTCKNNTFNGMPLPDIDVLEEDGS 386

Query: 351 IKAIREFSYNDYYNNL 366
           +K +++F Y D+   L
Sbjct: 387 VKVLKKFGYEDFKMRL 402


>gi|325280295|ref|YP_004252837.1| carboxynorspermidine decarboxylase [Odoribacter splanchnicus DSM
           20712]
 gi|324312104|gb|ADY32657.1| carboxynorspermidine decarboxylase [Odoribacter splanchnicus DSM
           20712]
          Length = 387

 Score =  258 bits (659), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 124/374 (33%), Positives = 198/374 (52%), Gaps = 10/374 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P Y++ +  L +NL     +RK  G ++++ALK  A W +F  L+++ DG T+SSL 
Sbjct: 16  VPSPCYVLHETLLADNLRVIDKVRKATGAEIIVALKANAMWSIFPELSRHSDGATASSLA 75

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E++G   H Y   Y + EI  +L+  + I FN++ Q  +F  +A +     GLR
Sbjct: 76  EARLVFEEYGAPAHTYAPVYTEGEIGEILNCSNHITFNSLGQYERFGRRAHRAGVSCGLR 135

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP  S  +  L +P  P SRLG    D      + ++GL FH+ CE++        L  
Sbjct: 136 VNPEFSTVETDLYNPASPTSRLGILAADL-THLPEGIDGLHFHSLCESR-PDDLRGTLAA 193

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240
           +E+ FG F  QI+W+++GGG   T KDY  ++    L +F  +Y   +I LEPG A   +
Sbjct: 194 VEERFGRFFPQIKWLNMGGGHLMTHKDYDEEELIHILCDFRSRYPHLRIILEPGSAFTWD 253

Query: 241 TTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGR 295
           T  L  TV D +S    + ++++ S   H+PD L       I     P  G     + G 
Sbjct: 254 TGCLVATVEDKVSNGGVDTLMLNVSFACHMPDCLEMPYKPAILGTHEPAEGEKRWRMGGN 313

Query: 296 SCLAGDIFGEFHFE--KPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353
           SCLAGD +G++ F+  +  ++GDRI F D+  Y + +   FNG+  P+I + N +   + 
Sbjct: 314 SCLAGDYYGDWAFDGGREPRVGDRIVFRDMIHYTMVKTTMFNGVTHPSIGIWNPETGFRL 373

Query: 354 IREFSYNDYYNNLS 367
           +R+F Y DY N +S
Sbjct: 374 VRKFGYEDYKNRMS 387


>gi|310816500|ref|YP_003964464.1| carboxynorspermidine decarboxylase [Ketogulonicigenium vulgare Y25]
 gi|308755235|gb|ADO43164.1| carboxynorspermidine decarboxylase [Ketogulonicigenium vulgare Y25]
          Length = 365

 Score =  258 bits (659), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 195/366 (53%), Positives = 252/366 (68%), Gaps = 3/366 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           +I+TP+YLID+ KL  NL     +R  +G K LLALKCFA W +FD L + MDGTTSSSL
Sbjct: 2   VIETPFYLIDRTKLSRNLQIINRLRDLSGAKTLLALKCFATWPVFDQLAEVMDGTTSSSL 61

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           YE+ LGHEKFG ETHAY+V + D EID  +S  D IIFN++ QL +F+  A       GL
Sbjct: 62  YELRLGHEKFGKETHAYSVGWSDAEIDEAVSYADKIIFNSIGQLTRFE--AASSKVARGL 119

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP  S S F LADP R FSRLGE   DKI + +  + G+M H NCEN  F  F   L 
Sbjct: 120 RLNPRFSTSGFDLADPARAFSRLGEWDVDKIRAVLPLITGVMIHYNCENGDFDLFDRQLT 179

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            IE EFG  + Q++W+SLGGGIHFT + YP++    RLK F+    VQ+YLEPGEA +TN
Sbjct: 180 RIEDEFGEILRQLDWVSLGGGIHFTGEGYPLEKLAARLKAFAANMGVQVYLEPGEATITN 239

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           TT+L  TVLDI  N K+L IVDSSVEAH+ D L+Y+ +A +   +G Y   + G+SCLAG
Sbjct: 240 TTSLEVTVLDILNNGKDLAIVDSSVEAHMLDLLIYRTTAKMET-SGDYPYQIAGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFG+F F KP+++GDR+S  D AGY + +KNWFNG+ MP+I ++ +DG++   REF Y 
Sbjct: 299 DIFGDFTFPKPLQVGDRLSIADAAGYTMVKKNWFNGVKMPSIVIRELDGSMTVAREFGYA 358

Query: 361 DYYNNL 366
           DY ++L
Sbjct: 359 DYASSL 364


>gi|163761494|ref|ZP_02168567.1| putative carboxynorspermidine decarboxylase protein [Hoeflea
           phototrophica DFL-43]
 gi|162281338|gb|EDQ31636.1| putative carboxynorspermidine decarboxylase protein [Hoeflea
           phototrophica DFL-43]
          Length = 365

 Score =  258 bits (659), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 210/367 (57%), Positives = 274/367 (74%), Gaps = 2/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           M++TPYYL+DK KLL N++    +R+ +G K LLALKCFA WG+FD +  YMDGTTSSSL
Sbjct: 1   MLQTPYYLVDKSKLLVNMEKIATLRELSGAKALLALKCFATWGVFDFMRDYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            EV LGH +FG ETHAY+VAY D EID V+S+ D IIFN++ QL +F   +Q      GL
Sbjct: 61  NEVRLGHTRFGKETHAYSVAYADHEIDEVVSHADKIIFNSIGQLTRFG--SQSAGIIRGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP VS S F LADP RPFSRLGE    K+E  ++ ++G M HNNCEN  F  F  ML 
Sbjct: 119 RLNPGVSSSTFDLADPARPFSRLGEWDLAKVEPVMELISGFMIHNNCENGDFDLFDKMLG 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
           +IE++FG  + + EW+SLGGGIHFT +DYP++ F +RLK FS  + VQ+YLEPGEA +TN
Sbjct: 179 DIEQKFGPLLKKAEWVSLGGGIHFTGEDYPLEKFAERLKRFSGDFGVQVYLEPGEAAITN 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           +TTL  TVLD   N K+LV+VDSS+EAH+ D L+Y+ESA ++P+ GP+  MVCG+SCLAG
Sbjct: 239 STTLEVTVLDKLYNGKDLVVVDSSIEAHLLDLLIYRESAKVHPDQGPHRYMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGEF F + + IGDRIS +D AGY + +KNWFNG+ MP IA++ +DG+++ +REF+Y 
Sbjct: 299 DIFGEFDFPEELNIGDRISIQDTAGYTMVKKNWFNGVQMPAIAIRELDGSLRTVREFAYA 358

Query: 361 DYYNNLS 367
           DY  +LS
Sbjct: 359 DYEQSLS 365


>gi|288941773|ref|YP_003444013.1| carboxynorspermidine decarboxylase [Allochromatium vinosum DSM 180]
 gi|288897145|gb|ADC62981.1| carboxynorspermidine decarboxylase [Allochromatium vinosum DSM 180]
          Length = 368

 Score =  258 bits (659), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 169/367 (46%), Positives = 241/367 (65%), Gaps = 3/367 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TPYYLID+ +L  NL+    +R+ +G K +LALKCF+ W +FD + QY+DGTTSSSLY
Sbjct: 4   LATPYYLIDESRLQRNLEIIRQVRERSGAKSVLALKCFSTWCVFDLMRQYLDGTTSSSLY 63

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LG+E FGGETHAY+V +   E+ AV    D +IFN++SQL +F          +GLR
Sbjct: 64  EARLGYETFGGETHAYSVGFSRDEVLAVREFADKLIFNSLSQLRRFHP--DVAGLNLGLR 121

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP +SYS F LADP R +SRLG   K  +      + GLMFH NCEN       A L+ 
Sbjct: 122 VNPGISYSNFDLADPARRYSRLGVSDKAALAEVAPWLKGLMFHFNCENPDVDNIRASLET 181

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           + +E+G  + ++EW+SLGGG+ FT   Y +  FC+ L+ FS  + +Q+YLEPGEA VT +
Sbjct: 182 LGREYGELLHRMEWVSLGGGLSFTQDGYALDAFCEALRAFSRTFDIQVYLEPGEAAVTQS 241

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY-PNTGPYTAMVCGRSCLAG 300
           T L TTVLD+  N  ++ I+D+S+EAH+ D+L+Y+    +  P  G +  MV GR+CLAG
Sbjct: 242 TELVTTVLDVVHNEVDIAIIDASLEAHMLDHLIYRTHPRLASPPPGEHRMMVAGRTCLAG 301

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           D+FG+F    P+++GD +   D  GY + + NWFNG+ MP I V+ +DGT++ +R F Y+
Sbjct: 302 DVFGDFKLAAPLQVGDEVRIADAGGYTMVKVNWFNGVAMPAIVVRRLDGTLERVRSFGYD 361

Query: 361 DYYNNLS 367
           D+  +LS
Sbjct: 362 DFKRSLS 368


>gi|84515479|ref|ZP_01002841.1| NspC, carboxynorspermidine decarboxylase [Loktanella vestfoldensis
           SKA53]
 gi|84510762|gb|EAQ07217.1| NspC, carboxynorspermidine decarboxylase [Loktanella vestfoldensis
           SKA53]
          Length = 364

 Score =  258 bits (659), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 215/366 (58%), Positives = 269/366 (73%), Gaps = 2/366 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TPYYLIDK  LL NL+   ++R+ +GVK LLALKCFA W +FD + ++MDG+TSSSLY
Sbjct: 1   MQTPYYLIDKSCLLRNLEKISWLREASGVKCLLALKCFATWSVFDFMAEHMDGSTSSSLY 60

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG EKF GETHAY+VAY D EI  VL+  D IIFN++ QL KF D +Q      GLR
Sbjct: 61  EVRLGREKFPGETHAYSVAYADHEIAQVLAYSDKIIFNSIGQLAKFNDASQGHV--RGLR 118

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP VS S+F LADP RPFSRLGE    KI +    ++GLMFHNNCEN SF  F  ML  
Sbjct: 119 VNPGVSTSEFDLADPARPFSRLGEHDPAKIAAVADQISGLMFHNNCENDSFARFDEMLTL 178

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           IE  FG  I ++ WISLGGGIHFT  DYP+++   RLKEFS+K+ VQ+YLEPGEA +T  
Sbjct: 179 IEDRFGAIIHKMAWISLGGGIHFTGADYPLENLALRLKEFSQKFGVQVYLEPGEAAITGA 238

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGD 301
            TL  TVLD   N KNL IVDSS+EAH+ D L+Y+E A I PNTG +  M+CG+SCLAGD
Sbjct: 239 ATLEVTVLDTMHNGKNLAIVDSSIEAHLLDLLIYREPAKIAPNTGAHEWMICGKSCLAGD 298

Query: 302 IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361
           IFGEF F+ P+K GDR+SF+D AGY + +KNWFNG+ MP+IA++ +DGT + +R+F Y+D
Sbjct: 299 IFGEFLFDAPLKAGDRLSFQDTAGYTMVKKNWFNGVKMPSIAIRELDGTTRLVRDFDYDD 358

Query: 362 YYNNLS 367
           +   LS
Sbjct: 359 FAAALS 364


>gi|126460903|ref|YP_001042017.1| carboxynorspermidine decarboxylase [Rhodobacter sphaeroides ATCC
           17029]
 gi|126102567|gb|ABN75245.1| carboxynorspermidine decarboxylase [Rhodobacter sphaeroides ATCC
           17029]
          Length = 365

 Score =  258 bits (659), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 192/366 (52%), Positives = 258/366 (70%), Gaps = 2/366 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MI+TPYYLID  +L  N+     +R+ +G K LLALKCFA W  F+ +  +MDGTTSSSL
Sbjct: 1   MIQTPYYLIDADRLRQNMAVVDRLRQASGAKALLALKCFATWPAFEHMRDHMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           YE+ LG EKFG ETHAY+VA+ D EID  +   D IIFN+V QL +F+++   +    GL
Sbjct: 61  YELRLGREKFGKETHAYSVAWPDHEIDEAVGYADKIIFNSVGQLARFRNRTGGIA--RGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP +S S F LADP RPFSRLGE   +KIE+ + +++G+M H NCEN     F   L 
Sbjct: 119 RLNPGLSTSGFDLADPARPFSRLGEWSAEKIEAVLPDISGVMIHYNCENADVDLFDRQLS 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            IE  FG  + +++W+SLGGGIHFT + YPV     RLK F+  + VQ+YLEPGEA +T 
Sbjct: 179 EIEGRFGAILDRLDWVSLGGGIHFTGEGYPVDRLAARLKAFAAAHGVQVYLEPGEAAITR 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           + TL  TVLD+ +N K L IVDSSVEAH+ D L+Y++SA + P+ G ++ MVCG+SCLAG
Sbjct: 239 SATLEVTVLDLLDNGKQLAIVDSSVEAHMLDLLIYRQSAKVEPDAGDHSYMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGEF F +P+++GDR+S  D AGY + +KNWFNG+ MP+I ++  DG+++  REF Y 
Sbjct: 299 DIFGEFRFAQPLQVGDRLSIADAAGYTMVKKNWFNGVKMPSIVIREPDGSLRVAREFGYG 358

Query: 361 DYYNNL 366
           DY ++L
Sbjct: 359 DYASSL 364


>gi|221640964|ref|YP_002527226.1| carboxynorspermidine decarboxylase [Rhodobacter sphaeroides KD131]
 gi|221161745|gb|ACM02725.1| Carboxynorspermidine decarboxylase [Rhodobacter sphaeroides KD131]
          Length = 365

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 193/366 (52%), Positives = 258/366 (70%), Gaps = 2/366 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MI+TPYYLID  +L  N+     +R+ +G K LLALKCFA W  F+ +  +MDGTTSSSL
Sbjct: 1   MIQTPYYLIDADRLRQNMAVVDRLRQASGAKALLALKCFATWPAFEHMRDHMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           YE+ LG EKFG ETHAY+VA+ D EID  +   D IIFN+V QL +F+D+   +    GL
Sbjct: 61  YELRLGREKFGKETHAYSVAWPDHEIDEAVGYADKIIFNSVGQLARFRDRTGDIA--RGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP +S S F LADP RPFSRLGE   +KIE+ + +++G+M H NCEN     F   L 
Sbjct: 119 RLNPGLSTSGFDLADPARPFSRLGEWSAEKIEAVLPDISGVMIHYNCENADVDLFDRQLS 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            IE  FG  + +++W+SLGGGIHFT + YPV     RLK F+  + VQ+YLEPGEA +T 
Sbjct: 179 EIEGRFGAILDRLDWVSLGGGIHFTGEGYPVDRLAARLKAFAAAHGVQVYLEPGEAAITR 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           + TL  TVLD+ +N K L IVDSSVEAH+ D L+Y++SA + P+ G ++ MVCG+SCLAG
Sbjct: 239 SATLEVTVLDLLDNGKQLAIVDSSVEAHMLDLLIYRQSAKVEPDAGDHSYMVCGKSCLAG 298

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGEF F +P+++GDR+S  D AGY + +KNWFNG+ MP+I ++  DG+++  REF Y 
Sbjct: 299 DIFGEFRFAQPLQVGDRLSIADAAGYTMVKKNWFNGVKMPSIVIREPDGSLRVAREFGYG 358

Query: 361 DYYNNL 366
           DY ++L
Sbjct: 359 DYASSL 364


>gi|218130916|ref|ZP_03459720.1| hypothetical protein BACEGG_02511 [Bacteroides eggerthii DSM 20697]
 gi|217987260|gb|EEC53591.1| hypothetical protein BACEGG_02511 [Bacteroides eggerthii DSM 20697]
          Length = 381

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 118/373 (31%), Positives = 196/373 (52%), Gaps = 9/373 (2%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+++++ L  NL+    +   AGV+++LA K FA W  F    +Y++ +T+SS+YE
Sbjct: 10  PSPCYIMEEELLRKNLELIKSVADRAGVEIILAFKSFAMWRSFPIFREYVEHSTASSVYE 69

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGL 120
             L  E+FG + H Y+ AY +     ++     I FN+++Q  +F     A       G+
Sbjct: 70  ARLALEEFGSKAHTYSPAYTEAGFPEIMRCSSHITFNSLAQFRRFYPMIQADGQGISCGI 129

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP  S  +  L +P  P +R G   +   +   + ++G   H +CE+ S+      L+
Sbjct: 130 RVNPEYSEVETELYNPCAPGTRFGVMAEQLSDVLPQGIDGFHCHCHCESSSYE-LERTLE 188

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239
           ++E +F  +  Q++W++LGGG   T KDY V+   + L+   E+Y   +I LEPG A   
Sbjct: 189 HLEAKFSRWFPQLKWLNLGGGHLMTRKDYDVEHLIRLLRGLKERYPHLRIILEPGSAFTW 248

Query: 240 NTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT----GPYTAMVCG 294
            T  L + V+D +        I++ S   H+PD L       +        GPY   + G
Sbjct: 249 QTGVLTSEVVDLVENRGIRTAILNVSFTCHMPDCLEMPYQPVVRGAEMGNDGPYVYRLGG 308

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            SCL+GD  G + F+  ++IG+RI FED+  Y + + N FNGI+ PTIA+   +G     
Sbjct: 309 NSCLSGDYMGMWSFDHELQIGERIIFEDMIHYTMVKTNMFNGIHHPTIAMWTKEGKADLF 368

Query: 355 REFSYNDYYNNLS 367
           ++FSY DY + +S
Sbjct: 369 KQFSYEDYRDRMS 381


>gi|124516709|gb|EAY58217.1| Diaminopimelate decarboxylase [Leptospirillum rubarum]
          Length = 414

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 59/385 (15%), Positives = 118/385 (30%), Gaps = 22/385 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P Y+  ++ L     +     +     +  A+K      +   L +   G    S  
Sbjct: 25  VDSPVYIYSEKALREAYSSYQQAFQGHRTLIAYAMKANGNLQILSMLGKMGSGADVVSGG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116
           E+          +   +    K      +A+ +        +  +L++    A  + K  
Sbjct: 85  ELFRARRAGIPSDRIVFAGVGKTDGEMREAIDAGILMFNVESSMELDRLSRVASSMGKVA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNC-- 167
            + LR+NP V              S+ G      +E   +        + G+  H     
Sbjct: 145 PVALRVNPDVDPKTHPYISTGMKKSKFGIPVDQALEEYRRAARLPGIRIVGIHQHIGSQL 204

Query: 168 -ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSE 223
            E   F      +    +       ++ W+ +GGG+     +      ++    +    E
Sbjct: 205 TEISPFRDAFDRMVAFARLLKENGIEVTWLDVGGGLGIRYGNEKPPTPREVAHEILSRLE 264

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES---A 279
             +V I LEPG +IV N   L T V  + E    +  + D+ +   +   L         
Sbjct: 265 GLNVGIILEPGRSIVGNAGILVTEVQYLKETSVKMFYIADAGMNDLIRPSLYGAFHDLWP 324

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            +          + G  C  GD   +     P + GD ++      Y     + +N    
Sbjct: 325 VVKKTGAGKKGDLVGPVCETGDFLVQDRELPPAEPGDLLAVMSAGAYGFAMASNYNARPR 384

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
           P   + + D         +Y D   
Sbjct: 385 PAEVLVSGDRFSVIRARETYEDLIR 409


>gi|298528736|ref|ZP_07016140.1| diaminopimelate decarboxylase [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298512388|gb|EFI36290.1| diaminopimelate decarboxylase [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 415

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 76/384 (19%), Positives = 130/384 (33%), Gaps = 22/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+   + L  + +      +        ++K  +   +   L Q   G    S  E
Sbjct: 26  DTPLYVYSAKTLRRHYEAFDSAFEGTRHMTCFSVKANSNICVLKLLGQMGAGVDIVSGGE 85

Query: 63  VMLGH-EKFGGETHAYNV-AYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +          +   Y+    ++ EI   L SN       +  +L +    A ++  +  
Sbjct: 86  LFRALKAGIDPQKIVYSGVGKREHEIREALLSNILMFNVESRQELERINQVASEMEVQAR 145

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-----KNVN--GLMFHNNCENK 170
             LRINP V              ++ G + +   ES        N+   G+  H   +  
Sbjct: 146 ISLRINPDVDPQTHPYISTGLKKNKFGLELEQAWESYKLARELSNIEPVGIDCHIGSQLT 205

Query: 171 SFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQ---RLKEFSEK 224
           S   F   L+ I+  +G        I+++ LGGG+  T          +    +KE  + 
Sbjct: 206 SVEPFLEALERIKSFYGRLQELGLDIKYLDLGGGLGITYDQEEPPHPAEFGRAVKESLKD 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + + LEPG  I  N   + T VL       KN VIVD+++   +   L          
Sbjct: 266 TDLTLILEPGRVIAGNAGIMVTRVLYTKGTPSKNFVIVDAAMNDLMRPSLYGSYHRIEPV 325

Query: 284 NTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                  YTA V G  C  GD   +      ++  D ++      Y     + +N    P
Sbjct: 326 QEKSGRLYTADVVGPICETGDFLAQGRELPRLEQDDLLAVHSAGAYGFTMASQYNSRPRP 385

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + + D  + A R   Y D   
Sbjct: 386 AEVLVDNDQAVLARRREVYFDLLQ 409


>gi|154174242|ref|YP_001408907.1| carboxynorspermidine decarboxylase [Campylobacter curvus 525.92]
 gi|153793066|gb|EAT99910.2| carboxynorspermidine decarboxylase [Campylobacter curvus 525.92]
          Length = 380

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 146/373 (39%), Positives = 218/373 (58%), Gaps = 10/373 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           IKTP Y+ ++ KL  NL+   +++  +G K+L+ALK FA  G+ D +++Y+DG T+S LY
Sbjct: 8   IKTPAYVCEEAKLRANLELLKHVKDESGAKILVALKGFALSGVMDMISRYLDGATASGLY 67

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E     +   GE H Y+ A+KD EID +LS    I+FN+++Q  KFKDKA       GLR
Sbjct: 68  EAKFAKDFIKGEIHTYSPAFKDEEIDEILSLSKHIVFNSLNQWRKFKDKALASGISCGLR 127

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKI-ESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           INP  S S     +P   FSRLG    +      +  + GL FH  CE +S      +L 
Sbjct: 128 INPESSASPTDAYNPCARFSRLGITRANLDKFDSLDGIEGLHFHALCE-ESAESLETVLM 186

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
           + E++FG  I++++WI+ GGG H T  DY V+     +K F ++Y V++YLEPGEA+   
Sbjct: 187 SFEEKFGSEISKMKWINFGGGHHITRADYNVQLLINLIKNFRDRYGVEVYLEPGEAVGWQ 246

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY--PNTGPYTAMVCGRSCL 298
           T  L  +VLDI EN KN+ I+D+S EAH+PD +L      +     +G ++    G +CL
Sbjct: 247 TGFLIASVLDIVENEKNIAILDTSAEAHMPDTILMPYRPAVRGESRSGKFSYRFGGNTCL 306

Query: 299 AGDIFG------EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352
           AGDI G      ++ F +P+KIGD++ FED   Y I +   FNGI +P + +   +G I+
Sbjct: 307 AGDIVGQDAGNADYKFNEPLKIGDKVIFEDQIHYTIVKNTTFNGIKLPDLLLLKENGEIE 366

Query: 353 AIREFSYNDYYNN 365
            +R+F Y++Y   
Sbjct: 367 ILRKFGYDEYKRR 379


>gi|329895585|ref|ZP_08271081.1| Carboxynorspermidine decarboxylase, putative [gamma proteobacterium
           IMCC3088]
 gi|328922264|gb|EGG29614.1| Carboxynorspermidine decarboxylase, putative [gamma proteobacterium
           IMCC3088]
          Length = 387

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 126/376 (33%), Positives = 201/376 (53%), Gaps = 11/376 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P +++D+  +  NLD    +   +G K+L ALK F+ + +       + GT SS L+
Sbjct: 13  LPSPCWVVDEVAVQRNLDILHEVGAKSGAKVLAALKAFSMFELAPLYKNRVWGTCSSGLH 72

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-----AQKLHK 116
           E +L  E + GE H ++ AY   +++ +L   D ++FN+V Q  +FK       A++ H 
Sbjct: 73  EALLAKEFYPGEVHVFSAAYSQADLEKILEIADHVVFNSVQQWRRFKPLCQAAQARRTHL 132

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
             GLR+NP  S     L DP  P SRLG         + + ++GL FH  CE   F   +
Sbjct: 133 SFGLRVNPEHSEGDVPLYDPCAPGSRLGIPRSQLQIEDFEGISGLHFHTLCE-HPFEPLA 191

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
             +  +E+ FG  ++ + W++ GGG H T + Y        ++ FS KY VQ+YLEPGEA
Sbjct: 192 RTVAALEERFGDILSGLNWVNFGGGHHITAEGYDRDGLIALIQSFSAKYQVQVYLEPGEA 251

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----YPNTGPYTAMV 292
           +   T  L + VLD++   +   I+D+S   H+PD L     A I      N   YT  +
Sbjct: 252 VAIGTGVLVSEVLDVTYTDRPQAILDTSATCHMPDTLEMPYRALISGAGEANELSYTYRL 311

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-GTI 351
            G +CLAGD+ G++ F  P+ +G R+ FED++ Y + + + FNG  +P IAV N D   +
Sbjct: 312 GGLTCLAGDVMGDYSFAAPLDVGQRLMFEDMSHYTMVKTSTFNGTKLPAIAVWNSDTNAV 371

Query: 352 KAIREFSYNDYYNNLS 367
           + +R F Y+D+ + LS
Sbjct: 372 RIVRRFEYHDFRDRLS 387


>gi|57506771|dbj|BAD86639.1| putative carboxynorspermidine decarboxylase [Selenomonas
           ruminantium]
          Length = 391

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 136/385 (35%), Positives = 211/385 (54%), Gaps = 20/385 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y++D+Q L NNL     ++  AG K+LLA KCF+ +  +  + +Y+DG T+S LY
Sbjct: 8   VPTPAYVVDEQALENNLQILQEVKAAAGCKILLAQKCFSMFAEYPLIGKYLDGATASGLY 67

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA------QKLH 115
           E  LGHE+  GE H ++ AY+  EI+ +   CD +IFN+ SQL +F  K       + + 
Sbjct: 68  EARLGHEEMEGENHVFSPAYRPEEIEEIAGICDHVIFNSFSQLRRFGAKVKAIQQKRGVQ 127

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCEN 169
             IGLRINP  S     + DP    SRLG   +D  +           ++GL FH  CE 
Sbjct: 128 HGIGLRINPECSTQDHAIYDPCAAGSRLGVTAEDFAKMAAVEPELFALLDGLHFHTLCEQ 187

Query: 170 KSFLCFSAMLKNIEKEFGHFITQ--IEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
            S       L+ +E++FG ++ Q  I W+++GGG H T  DY  +     ++   EKY V
Sbjct: 188 NSDALAE-TLQAVEQKFGRWLEQDSIHWLNMGGGHHITRADYDRQLLIDLVQSVREKYGV 246

Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN-- 284
           ++YLEPGEA+  N   L T VLD ++ +  +++++D+S   H+PD L       +  +  
Sbjct: 247 EVYLEPGEAVALNAGYLVTEVLDTVTNHGTHILLLDASAACHMPDVLEMPYRPPLKDSGE 306

Query: 285 --TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
                Y   +   +CLAGDI G++ F++ +  GDR+ FED+A Y++ + N FNG+ +P I
Sbjct: 307 AGEKAYNYRLSSCTCLAGDIIGDYSFDREILPGDRLYFEDMAIYSMVKNNTFNGMALPAI 366

Query: 343 AVKNVDGTIKAIREFSYNDYYNNLS 367
              N  G    +++F Y D+   LS
Sbjct: 367 WKMNAAGDCTLVKKFGYKDFKERLS 391


>gi|238925685|ref|YP_002939202.1| carboxynorspermidine decarboxylase [Eubacterium rectale ATCC 33656]
 gi|238877361|gb|ACR77068.1| carboxynorspermidine decarboxylase [Eubacterium rectale ATCC 33656]
          Length = 395

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 136/379 (35%), Positives = 210/379 (55%), Gaps = 14/379 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TP Y+ID+ KL  NL     + +  G ++LLA K F+A+  +  + +Y+ GTT+S L+
Sbjct: 18  LRTPCYVIDEGKLTENLLILNGVMQRTGARILLAQKAFSAFYEYPLIGRYLSGTTASGLF 77

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI--G 119
           E  L HE+ G E H +  A+   E+D ++  CD I+FN+VSQ    +DK +K  KKI  G
Sbjct: 78  EARLAHEEMGKENHVFCPAFLPQEMDELVEICDHIVFNSVSQYLLHRDKIEKADKKISVG 137

Query: 120 LRINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKN-----VNGLMFHNNCENKSFL 173
           LRINP  S      + DP  P SRLG   +   ++         + G  FH  CE  S  
Sbjct: 138 LRINPECSTQEGHEIYDPCAPGSRLGITREALDKAIKNGLDLSRIEGFHFHTLCEQDS-D 196

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
                L  +E++FG  +  ++W+++GGG H T  DY ++   + +    +KY ++IYLEP
Sbjct: 197 ALETTLAAVEEKFGDLLYGLKWLNMGGGHHITRADYDIERLEKCIMHMRDKYDLEIYLEP 256

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPN----TGPY 288
           GEA+  +   L TTVLDI EN    +++ D+S   H+PD L       +  +       Y
Sbjct: 257 GEAVALDAGYLETTVLDIVENNGIKILILDTSAACHMPDVLEMPYRPPLMDSGEPGEKKY 316

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348
           T  +   +CLAGD+ G++ F++ +K GDR+ F D+A Y++ + N FNG+ +P IAV + +
Sbjct: 317 TYRLSSCTCLAGDVIGDYSFDREIKTGDRLCFCDMAIYSMVKNNTFNGMPLPDIAVMDEN 376

Query: 349 GTIKAIREFSYNDYYNNLS 367
              K IR F Y D+   LS
Sbjct: 377 NDCKVIRRFEYEDFKCRLS 395


>gi|291527854|emb|CBK93440.1| carboxynorspermidine decarboxylase [Eubacterium rectale M104/1]
          Length = 383

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 135/379 (35%), Positives = 210/379 (55%), Gaps = 14/379 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TP Y+ID+ KL  NL     + +  G ++LLA K F+A+  +  + +Y+ GTT+S L+
Sbjct: 6   LRTPCYVIDEGKLTENLLILNGVMQRTGARILLAQKAFSAFYEYPLIGRYLSGTTASGLF 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI--G 119
           E  L HE+ G E H +  A+   E+D ++  CD I+FN++SQ    +DK +K HKKI  G
Sbjct: 66  EARLAHEEMGKENHVFCPAFLPQEMDELVEICDHIVFNSISQYLLHRDKIEKAHKKISVG 125

Query: 120 LRINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKN-----VNGLMFHNNCENKSFL 173
           LRINP  S      + DP  P SRLG   +   ++         + G  FH  CE  S  
Sbjct: 126 LRINPECSTQEGHEIYDPCAPGSRLGITREALDKAIKNGLDLSRIEGFHFHTLCEQDS-D 184

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
                L  +E++F   +  ++W+++GGG H T  DY ++   + +    +KY ++IYLEP
Sbjct: 185 ALETTLAAVEEKFADLLYGLKWLNMGGGHHITRADYDIERLEKCIMHMRDKYDLEIYLEP 244

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPN----TGPY 288
           GEA+  +   L TTVLDI EN    +++ D+S   H+PD L       +  +       Y
Sbjct: 245 GEAVALDAGYLETTVLDIVENNGIKILILDTSAACHMPDVLEMPYRPPLMDSGEPGEKKY 304

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348
           T  +   +CLAGD+ G++ F++ +K GDR+ F D+A Y++ + N FNG+ +P IAV + +
Sbjct: 305 TYRLSSCTCLAGDVIGDYSFDREIKTGDRLCFCDMAIYSMVKNNTFNGMPLPDIAVMDEN 364

Query: 349 GTIKAIREFSYNDYYNNLS 367
              K IR F Y D+   LS
Sbjct: 365 NDCKVIRRFEYEDFKCRLS 383


>gi|85703337|ref|ZP_01034441.1| putative carboxynorspermidine decarboxylase protein [Roseovarius
           sp. 217]
 gi|85672265|gb|EAQ27122.1| putative carboxynorspermidine decarboxylase protein [Roseovarius
           sp. 217]
          Length = 364

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 203/367 (55%), Positives = 254/367 (69%), Gaps = 3/367 (0%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           MI TPYYLID+Q+LL N+     +R  +G K LLALKCFA W  F T+  YMDGTTSSSL
Sbjct: 1   MIPTPYYLIDEQRLLQNMHKIERLRALSGAKALLALKCFATWSAFPTMQPYMDGTTSSSL 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           +E+ LG EKFG ETHAY+VA+ D EID  +S  D IIFNTV QL ++   +Q    + GL
Sbjct: 61  FELRLGREKFGKETHAYSVAWSDAEIDDAVSYADKIIFNTVGQLTRYD--SQSAGIERGL 118

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP  S S F LADP RPFSRLGE   DKI   I  ++G+M H NCEN  F  F   L 
Sbjct: 119 RLNPRFSTSSFDLADPARPFSRLGEWDVDKILGVIDRISGVMIHYNCENSDFDLFDQQLA 178

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            IE EF   + +++W+SLGGGIHFT  DYP++    RLK F+E++ VQ+YLEPGEA +T 
Sbjct: 179 RIEAEFAPVLERLQWVSLGGGIHFTGDDYPLEKLAARLKGFAERFGVQVYLEPGEAAITG 238

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
           +TTL  TVLD+ +N K+L IVDSS EAH+ D L+Y+ESA   P  G +   +CG+SCLAG
Sbjct: 239 STTLEVTVLDLLDNGKDLAIVDSSTEAHMLDLLIYRESAK-LPQEGSHAYEICGKSCLAG 297

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           DIFGE  F  P+ IGDRIS  D AGY + +KNWFNG+NMP IA++  DGT+  IR F++ 
Sbjct: 298 DIFGEARFAAPLSIGDRISIADTAGYTMVKKNWFNGVNMPAIAIRRPDGTVDLIRSFTFE 357

Query: 361 DYYNNLS 367
           DY  +LS
Sbjct: 358 DYAASLS 364


>gi|311693138|gb|ADP96011.1| diaminopimelate decarboxylase [marine bacterium HP15]
          Length = 416

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 63/382 (16%), Positives = 121/382 (31%), Gaps = 24/382 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +        ++    +  A+K  +   + + L +   G    S  E
Sbjct: 26  GTPAYVYSRATLERHYRAYDDALRDHPHLVCYAVKANSNLAVLNVLARLGAGFDIVSAGE 85

Query: 63  VMLG-HEKFGGETHAYNV-AYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++    ++ E+  A+          + ++L++    A +L     
Sbjct: 86  LERVLRAGGDPSRVVFSGVGKQEWEMKRALEVGVRCFNVESDTELDRLNAVAGELGVKAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G    +              +V G+  H   +  
Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIDIAEASQVYARAAGMPNLDVKGVDCHIGSQLT 205

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK---EFSEK 224
           S   F   L  +             I  + +GGG+  T            +K   E    
Sbjct: 206 SVSPFLDALDRVLALIDSLADQGIHIHHLDMGGGLGVTYNQEQPPQPSDYVKALAERLGD 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIYP 283
             +++ LEPG +I  N   L T V  +         I+D+++   +   L     A I  
Sbjct: 266 RKLELILEPGRSIAANAGILVTRVEFLKCTEHRNFAIIDAAMNDLIRPALYSAWQAIIPV 325

Query: 284 NTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       + G  C  GD  G+    + ++ GD ++      Y     + +N  N 
Sbjct: 326 KPHQDGEEKAWDLVGPVCETGDFLGKDRHLR-LQAGDLLAVRSAGAYGFVMSSNYNTRNR 384

Query: 340 PTIAVKNVDGTIKAIREFSYND 361
           P   + + D      R  +  D
Sbjct: 385 PPELMVDGDQVHVVRRRETLED 406


>gi|291524108|emb|CBK89695.1| carboxynorspermidine decarboxylase [Eubacterium rectale DSM 17629]
          Length = 383

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 136/379 (35%), Positives = 209/379 (55%), Gaps = 14/379 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TP Y+ID+ KL  NL     + +  G ++LLA K F+A+  +  + +Y+ GTT+S L+
Sbjct: 6   LRTPCYVIDEGKLTENLLILNGVMRRTGARILLAQKAFSAFYEYPLIGRYLSGTTASGLF 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI--G 119
           E  L HE+ G E H +  A+   E+D ++  CD I+FN+VSQ    +DK +K  KKI  G
Sbjct: 66  EARLAHEEMGKENHVFCPAFLPQEMDELVEICDHIVFNSVSQYLLHRDKIEKADKKISVG 125

Query: 120 LRINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKN-----VNGLMFHNNCENKSFL 173
           LRINP  S      + DP  P SRLG       ++         + G  FH  CE  S  
Sbjct: 126 LRINPECSTQEGHEIYDPCAPGSRLGITRDALDKAIKNGLDLSRIEGFHFHTLCEQDS-D 184

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
                L  +E++FG  +  ++W+++GGG H T  DY ++   + +    +KY ++IYLEP
Sbjct: 185 ALETTLAAVEEKFGDLLYGLKWLNMGGGHHITRADYDIERLEKCIMHMRDKYDLEIYLEP 244

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPN----TGPY 288
           GEA+  +   L TTVLDI EN    +++ D+S   H+PD L       +  +       Y
Sbjct: 245 GEAVALDAGYLETTVLDIVENNGIKILILDTSAACHMPDVLEMPYRPPLMDSGEPGEKKY 304

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348
           T  +   +CLAGD+ G++ F++ +K GDR+ F D+A Y++ + N FNG+ +P IAV + +
Sbjct: 305 TYRLSSCTCLAGDVIGDYSFDREIKTGDRLCFCDMAIYSMVKNNTFNGMPLPDIAVMDEN 364

Query: 349 GTIKAIREFSYNDYYNNLS 367
              K IR F Y D+   LS
Sbjct: 365 NDCKVIRRFEYEDFKCRLS 383


>gi|237752603|ref|ZP_04583083.1| carboxynorspermidine decarboxylase [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229376092|gb|EEO26183.1| carboxynorspermidine decarboxylase [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 405

 Score =  256 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 138/396 (34%), Positives = 209/396 (52%), Gaps = 31/396 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I +P Y+++++K   NL     ++K +G K+LLALK +A W  FD   QY+ G T+S +Y
Sbjct: 11  IPSPCYVLEEEKFEKNLQLLDSVQKRSGAKILLALKGYALWRSFDLAKQYLSGVTASGIY 70

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK----- 116
           E  LG+E+FG E   ++ +YK  E+  ++   + IIFN+  Q   FKD     +      
Sbjct: 71  EARLGYEEFGKEVTVFSPSYKLEEMRELVQISNHIIFNSFIQWQTFKDLIDTQNSLRERK 130

Query: 117 -----KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFHNNC 167
                ++GLR+NP  S     + +P    SRLG   K+  +         ++GL FH +C
Sbjct: 131 GLAKIEVGLRVNPKYSEVTPAIYNPCVEGSRLGITPKEFKKGIKKYGLDGISGLHFHTHC 190

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
           E  S       LK+ EK FG  I Q+ WI+ GGG H T KDY V    + +K+F +KY  
Sbjct: 191 EQNSDALKRT-LKHFEKHFGEIIPQMRWINFGGGHHITRKDYDVDLLVKIIKDFKKKYKT 249

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN--- 284
           ++YLEPGEA+      L  +V+DI +N  ++ I+D S  AH+PD L       +  +   
Sbjct: 250 EVYLEPGEAVGWQCGFLLGSVIDIVKNGIDIAILDVSAAAHMPDCLEMPYRPNVRNSYLA 309

Query: 285 -------------TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                           Y+    G +CLAGD+ G++ F+ P+KIGDRI FED+  Y I + 
Sbjct: 310 KAHFKNEKLRLKGEKSYSYRFGGPTCLAGDVIGDYSFKAPLKIGDRIIFEDMVHYTIVKN 369

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367
           N FNGI +P+I V   +G+ +  + + Y DY +  S
Sbjct: 370 NTFNGIPLPSIGVIRKNGSFELFKTYGYEDYKHRNS 405


>gi|223038998|ref|ZP_03609289.1| carboxynorspermidine decarboxylase [Campylobacter rectus RM3267]
 gi|222879637|gb|EEF14727.1| carboxynorspermidine decarboxylase [Campylobacter rectus RM3267]
          Length = 379

 Score =  256 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 132/372 (35%), Positives = 205/372 (55%), Gaps = 9/372 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           IKTP Y+ ++ K+  NL+    ++  +G K+L+ALK FA  G+   + +Y+DG T S LY
Sbjct: 8   IKTPAYVCEEAKVRKNLEILKRVKDESGAKVLVALKGFAFSGVMGLVGEYLDGATCSGLY 67

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E     +   GE H Y+ A+KD +ID VL+    ++FN+ +Q  KFK KA       GLR
Sbjct: 68  EAKFAAKYARGEIHTYSPAFKDEDIDEVLALSRHVVFNSFAQWAKFKQKALAAGVTCGLR 127

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP +S +     +P   +SRLG    +     ++ + GL FH  CE +S      +L  
Sbjct: 128 VNPELSVAPTDAYNPCGRYSRLGITRANFDADALEGITGLHFHALCE-ESAQSLETVLMA 186

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            E++FG FI +++W++ GGG H T + Y V      +K F  KY V++Y+EPGEA+   T
Sbjct: 187 FEEKFGEFIPRMKWVNFGGGHHVTKEGYDVDLLINLIKNFRAKYGVEVYIEPGEAVGWQT 246

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT--GPYTAMVCGRSCLA 299
             L  +VLD  +N K + I+D S EAH+PD +L      +   +  G ++    G +CLA
Sbjct: 247 GFLAASVLDFVQNEKTIAILDVSAEAHMPDTVLMPYRPAVRGESKGGKFSYRFGGNTCLA 306

Query: 300 GDIFG------EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353
           GDI G      E+ F+ P+ +GD++ FED   Y I +   FNGI +P + +   +G +  
Sbjct: 307 GDIVGLDAGEPEYKFDAPLSVGDKVIFEDQIHYTIVKNTTFNGIKLPDLLLLKENGELVT 366

Query: 354 IREFSYNDYYNN 365
           +REF + +Y   
Sbjct: 367 VREFGFEEYERR 378


>gi|294011711|ref|YP_003545171.1| putative diaminopimelate decarboxylase [Sphingobium japonicum
           UT26S]
 gi|292675041|dbj|BAI96559.1| putative diaminopimelate decarboxylase [Sphingobium japonicum
           UT26S]
          Length = 390

 Score =  256 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 113/373 (30%), Positives = 183/373 (49%), Gaps = 8/373 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P +++D+  +  NL     I   AG+K+L ALK F+ W +   + +Y+DG  +S +Y
Sbjct: 19  VPSPAFVVDEAAVRRNLSVLRDIGDRAGIKVLGALKAFSMWSLGPVIAEYLDGVCASGIY 78

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK---- 117
           E  L HE++ GE   Y  AYK  ++  +L   D +IFN+  Q+ + +   +         
Sbjct: 79  EARLAHEEYRGEIATYCAAYKAEDLAEILKISDHVIFNSPGQIARLRPVIENARNNGVNF 138

Query: 118 -IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
            IGLRINP  +  +    DP++P SRLG          +  V+GL  HN CE        
Sbjct: 139 DIGLRINPLHAEGEVPKYDPSQPHSRLGFPIDQLRPEHLAGVDGLHVHNLCEQDFLPLER 198

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
                  +   H    ++W++ GGG H T  DY        L+    +  +++Y+EPGEA
Sbjct: 199 TWAAIESRVMPHVG-GLKWLNFGGGHHVTRADYQTDLLIAFLQRIKARTGLELYIEPGEA 257

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-YTAMVCGR 295
           +  +   L   +LD+ +N   + I D S   H+PD +       +           + G 
Sbjct: 258 MALDAGILIGEILDVIDNGMPVAITDISATCHMPDVIEAPYRPAMLHEEMEGQPTRLGGP 317

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-GTIKAI 354
           SCLAGDI G++        G RI+F D A Y++ + N FNG+ +P+I + N +   ++ I
Sbjct: 318 SCLAGDIIGDYRVPGGATPGRRIAFLDQAHYSMVKTNTFNGVPLPSIWLWNSETDELQQI 377

Query: 355 REFSYNDYYNNLS 367
           R+FSY D+ + LS
Sbjct: 378 RQFSYEDFKSRLS 390


>gi|317050250|ref|YP_004111366.1| diaminopimelate decarboxylase [Desulfurispirillum indicum S5]
 gi|316945334|gb|ADU64810.1| diaminopimelate decarboxylase [Desulfurispirillum indicum S5]
          Length = 414

 Score =  256 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 68/385 (17%), Positives = 122/385 (31%), Gaps = 22/385 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+  ++ L  +         N    +  A+K  +   +   L +   G    S  
Sbjct: 25  VGTPVYVYSQRTLERHAQVFTQAFANLNAMICFAVKSNSNIHILRVLAEQGIGADIVSGG 84

Query: 62  EVMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK- 117
           E+          E   +       D    A+  +       ++ +L+  +  A++L+K  
Sbjct: 85  ELYRALKAGIPREKILFAGVGKKADEMEYALSEDIFMFNVESMEELDLLQATAKRLNKTA 144

Query: 118 -IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCEN 169
            + LR+NP V              ++ G   +  +ES           V G+  H   + 
Sbjct: 145 SVALRVNPDVDARTHPYISTGLKENKFGIPMESALESYRYAHSLSCIRVRGIHCHIGSQL 204

Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDF---CQRLKEFSE 223
            +   F      I+            IE+I +GGG+  T               +    +
Sbjct: 205 TAIEPFVDAFVIIKNLVRELLSENIPIEYIDMGGGLGITYDQEKPPLPTELAAAIAPHLK 264

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279
           +   ++ LEPG AI  NT    T VL   +N      IVD ++       L         
Sbjct: 265 EVPCRLILEPGRAIAGNTGAFLTRVLFTKDNGSRKFLIVDGAMNDLARPSLYGSFHDIRP 324

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            +          + G  C +GD F +     P   GD +S      Y     + +N    
Sbjct: 325 AVVREGNTEVVDIVGPVCESGDFFAKNRPLPPCHPGDILSLMSAGAYGFTMSSNYNSRPR 384

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
               + + D      +  +Y D   
Sbjct: 385 AAEVLVSGDRYRVIRQRETYEDLTR 409


>gi|224539564|ref|ZP_03680103.1| hypothetical protein BACCELL_04469 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224518820|gb|EEF87925.1| hypothetical protein BACCELL_04469 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 386

 Score =  256 bits (654), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 121/374 (32%), Positives = 194/374 (51%), Gaps = 10/374 (2%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y++D++ L  NL     +   AGV+++LA K FA W  F    +Y++ +T+SS+YE
Sbjct: 14  PSPCYIMDEELLRKNLTLIKSVADRAGVEIILAFKSFAMWRSFPIFREYIEHSTASSVYE 73

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKIGL 120
             L  E+FG + H Y+ AY + +   ++     I FN++SQ  +F  +  K       G+
Sbjct: 74  ARLALEEFGSKAHTYSPAYTEADFPEIMRCSSHITFNSLSQFCRFYPEVVKEGSGISCGI 133

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           RINP  S  +  L +P  P +R G       E   + + G   H +CE+ S+      LK
Sbjct: 134 RINPEYSEVETELYNPCAPGTRFGMTADLLTEVLPQGIEGFHCHCHCESSSYE-LERTLK 192

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239
           ++E++F  +  QI+W++LGGG   T KDY V+   Q LK+   +Y   +I LEPG A   
Sbjct: 193 HLEEKFSRWFPQIKWLNLGGGHLMTRKDYDVEHLIQLLKDLRARYPHLRIILEPGSAFTW 252

Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT-----GPYTAMVC 293
            T  L + V+DI  +      + + S   H+PD L       +         G +   + 
Sbjct: 253 QTGVLVSEVVDIVVSRGIRTAILNVSFTCHMPDCLEMPYQPAVRGAEIGNNGGCHVYRLG 312

Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353
           G SCL+GD  G++ F+  ++IG+RI FED+  Y + + N FNGI+ P IA+   +     
Sbjct: 313 GNSCLSGDYMGDWSFDHELQIGERIVFEDMIHYTMVKTNMFNGIHHPAIAMWTKERKADI 372

Query: 354 IREFSYNDYYNNLS 367
            ++FSY DY + +S
Sbjct: 373 FKQFSYEDYRDRMS 386


>gi|160943877|ref|ZP_02091107.1| hypothetical protein FAEPRAM212_01376 [Faecalibacterium prausnitzii
           M21/2]
 gi|158444553|gb|EDP21557.1| hypothetical protein FAEPRAM212_01376 [Faecalibacterium prausnitzii
           M21/2]
          Length = 403

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 127/378 (33%), Positives = 189/378 (50%), Gaps = 14/378 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP YL+D+ +L  N +  L +++  G ++LLA K F+ + ++  L  Y+ GT +S LY
Sbjct: 24  LPTPCYLLDEAQLRRNGEILLGVQQRTGCRILLAQKAFSNFNVYPVLAPYLAGTEASGLY 83

Query: 62  EVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           E  LG E+    E H +  AY+  E + +L   D I+FN+ SQL KF   A+   K IGL
Sbjct: 84  ESRLGREELPEKENHVFCAAYRTDEFEELLQYADHIVFNSPSQLAKFGPAAKAAGKSIGL 143

Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSFL 173
           RINP  S      + DP  P SRLG        +   +      ++GL FH  CE     
Sbjct: 144 RINPECSTQEGHEIYDPCAPGSRLGTTRAQWDAAVAAHPELPALLDGLHFHTLCEQD-AD 202

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
             +  L  +EK+F   + +++W++ GGG H T   Y +      +    +KY VQ+YLEP
Sbjct: 203 ALAVTLAAVEKKFADLLPRMKWLNFGGGHHITRPGYALDTLESCILSVRQKYGVQVYLEP 262

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPN----TGPY 288
           GEA   N   L TTVLD   N    + + D S   H PD +       +          +
Sbjct: 263 GEAWALNAGYLVTTVLDTLRNGDTSLAILDMSAACHTPDVIEMPYRPPLLDAGEAGEKAH 322

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348
           T  + G +CLAGDI G++ F  P+  GD++ F D+A Y   + N FNG+ +P I +   D
Sbjct: 323 TVRLGGPTCLAGDIIGDYSFNAPLAEGDKLIFGDMAIYTTCKNNTFNGMPLPPIWLLGAD 382

Query: 349 GTIKAIREFSYNDYYNNL 366
           G  + +  F Y D+   L
Sbjct: 383 GNCRELVHFGYQDFKMRL 400


>gi|84490355|ref|YP_448587.1| hypothetical protein Msp_1578 [Methanosphaera stadtmanae DSM 3091]
 gi|84373674|gb|ABC57944.1| LysA [Methanosphaera stadtmanae DSM 3091]
          Length = 429

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 75/391 (19%), Positives = 134/391 (34%), Gaps = 29/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           KTP Y+ID++K+ NN +        K   + +  A K      +   L        + S 
Sbjct: 29  KTPLYVIDEEKVRNNYNKLYTAFNSKYEDLHMCYAAKANTNLAVMKILEDEGSYIDAVSP 88

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLHKKI 118
            E+       F  E   +       E          TI  +++S L +         K+I
Sbjct: 89  GEIYTALLAGFTPERIVFTGNNVTNEELEYAHKTGVTINLDSISALERLSTIEGTKGKEI 148

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSF 172
            +R+NP V            P S+ G K ++ +E   K ++      G+  H   E    
Sbjct: 149 SIRVNPMVEAGHHEHCITGGPKSKFGIKEEEAVEVYQKAIDLGFKPIGMHSHIGSEILES 208

Query: 173 LCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK--------DFCQRLKE 220
             F   ++ +    G          +++  GGG     +    +        D  +  K 
Sbjct: 209 EPFMLAVETMMDIAGKVHKEVGVDFKFLDFGGGFGIPYEPTENELDLETFTTDIIKLFKS 268

Query: 221 FSEKYSV---QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
             E+Y +    +Y+EPG  +V N   L T V  I E+ +    VD      +   +    
Sbjct: 269 KLEEYDMGKPAMYIEPGRFLVGNAEVLLTRVNTIKESYRKFAGVDCGFGTLLRPTMYGSY 328

Query: 278 SATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
              +  N           + G  C +GD+F        ++ GD ++  +   Y  +  + 
Sbjct: 329 HHIVVANKINEENVEEIDIAGNLCESGDLFARDRPMPKLEEGDLLAILNAGAYAYSMASQ 388

Query: 334 FNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +N    P   + N D      R   ++D +N
Sbjct: 389 YNSRPRPAEVLVNKDEVDVIRRREEFSDLFN 419


>gi|270294148|ref|ZP_06200350.1| carboxynorspermidine decarboxylase [Bacteroides sp. D20]
 gi|270275615|gb|EFA21475.1| carboxynorspermidine decarboxylase [Bacteroides sp. D20]
          Length = 381

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 123/373 (32%), Positives = 194/373 (52%), Gaps = 9/373 (2%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y++++  L  NL     +   AGV+++LA K FA W  F    +Y+D +T+SS+YE
Sbjct: 10  PSPCYIMEEGLLRKNLALIKSVADRAGVEIILAFKSFAMWRSFPIFREYIDHSTASSVYE 69

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGL 120
             L  E+FG + H Y+ AY + +   ++     I FN++SQ ++F     A+      G+
Sbjct: 70  ARLALEEFGSKAHTYSPAYTEADFPEIMRCSSHITFNSLSQFHRFYPVVVAEGSGISCGI 129

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           RINP  S  +  L +P  P +R G       E     + G   H +CE+ S+      L+
Sbjct: 130 RINPEYSEVETELYNPCAPGTRFGVMADPLPEELPAGIEGFHCHCHCESSSYE-LEHTLE 188

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239
           ++E +F  + +QI+W++LGGG   T KDY V+   + L+    +Y   QI LEPG A   
Sbjct: 189 HLEGKFSRWFSQIKWLNLGGGHLMTRKDYDVEHLVRLLQGLKGRYPHLQIILEPGSAFTW 248

Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT----GPYTAMVCG 294
            T  L++ ++DI EN      + + S   H+PD L       +        GPY   + G
Sbjct: 249 QTGVLSSEIVDIVENRGIRTAILNVSFTCHMPDCLEMPYQPAVRGAEMGDAGPYVYRLGG 308

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            SCL+GD  G + F+  ++IG+RI FED+  Y   + N FNGI+ P IA+   +G  +  
Sbjct: 309 NSCLSGDYMGLWSFDHELQIGERIVFEDMIHYTTVKTNMFNGIHHPAIAMWTKEGKAEVF 368

Query: 355 REFSYNDYYNNLS 367
           ++FSY DY   +S
Sbjct: 369 KQFSYEDYRGRMS 381


>gi|167648396|ref|YP_001686059.1| Orn/DAP/Arg decarboxylase 2 [Caulobacter sp. K31]
 gi|167350826|gb|ABZ73561.1| Orn/DAP/Arg decarboxylase 2 [Caulobacter sp. K31]
          Length = 390

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 117/373 (31%), Positives = 192/373 (51%), Gaps = 8/373 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P +++D+  +  NL T   +    G  +LLALK F+ W + D + +Y+DG  +S L+
Sbjct: 19  VPSPCFVVDEAAVRRNLATLKDVGDRGGATMLLALKAFSMWSLADVVGEYLDGVCASGLW 78

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK---- 117
           E  L  E + G    Y+ AY+  ++  +L   D +IFN+  Q+ +F+D       +    
Sbjct: 79  EARLAREHYRGHLTTYSPAYRREDLPDILRLSDAVIFNSPDQMARFRDLIATARDQGQVF 138

Query: 118 -IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
            IGLR+NP  S ++    DP +  SRLG          ++ V+GL  H  CE   F    
Sbjct: 139 EIGLRLNPEHSEAEVAKYDPCQAGSRLGFPVSRLRLEHLEGVDGLHVHALCEQG-FEPLR 197

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
            +  ++E +    + +++W++LGGG H T  DY  +     L++ S ++ +Q+ LEPGEA
Sbjct: 198 RIWASLEPKLEGMLGRLKWLNLGGGHHITRADYDKEGLVAFLRQISARHGLQVVLEPGEA 257

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-NTGPYTAMVCGR 295
           I  +   L   +LD  +N   + I D S   H+PD +       +        T  + G 
Sbjct: 258 IALDAGILVGEILDTFDNAMTVAITDISATCHMPDVIEAPYRPALLNERPQGVTVRIGGP 317

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK-AI 354
           SCLAGDI G++ F      G RI+F D A Y++ + N FNG+ +P+IA+ N +  +   I
Sbjct: 318 SCLAGDIIGDYVFAATPTPGMRIAFLDQAHYSMVKTNTFNGVPLPSIALWNSESDVLKLI 377

Query: 355 REFSYNDYYNNLS 367
           R+F Y D+ + LS
Sbjct: 378 RQFDYTDFRDRLS 390


>gi|16330194|ref|NP_440922.1| carboxynorspermidine decarboxylase [Synechocystis sp. PCC 6803]
 gi|1652682|dbj|BAA17602.1| carboxynorspermidine decarboxylase [Synechocystis sp. PCC 6803]
          Length = 387

 Score =  256 bits (653), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 118/371 (31%), Positives = 193/371 (52%), Gaps = 7/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P ++++++ L  NL     ++++A ++++LALK FA +  F  L   + G ++SSL+
Sbjct: 17  LPSPCFVLEEELLQQNLAIFERLQQSAPIEVMLALKGFALFPCFPWLRSGLAGASASSLW 76

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+FG E H Y   Y+  ++ A++     I FN++ Q +++++  +    K GLR
Sbjct: 77  EARLAAEEFGKEVHVYAPTYRPDDLPAIIPLASHITFNSLGQWHRYRESLKNTAVKAGLR 136

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP  S  +  L +P    SRLG +      +    + G + HN CE+         L  
Sbjct: 137 INPEYSPVQTDLYNPCVSGSRLGVQAAMLAGNLPSGITGFLSHNLCESDHLA-LEKTLGQ 195

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240
           IEK FG ++ QIEW++LGGG   T + Y +      + EF +++   ++ +EPG AI   
Sbjct: 196 IEKLFGEYLPQIEWLNLGGGHLMTSQGYDMDYAIAVIGEFHQRHPHLRLIMEPGSAIAWQ 255

Query: 241 TTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT----AMVCGR 295
           T  L +TV D I        ++D S  AH+PD L       +     P T      + G 
Sbjct: 256 TGFLLSTVEDLIETPEFTHAMLDVSFTAHMPDCLEMPYRPEVRGARVPQTGDTVYRLGGS 315

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           SCLAGD  G++ F++P+++GDR+ FED+  Y + +   FNG++ P I      G  +  R
Sbjct: 316 SCLAGDFLGDYAFDQPLQVGDRLIFEDMMHYTMVKTTTFNGVHHPAIGCLRRSGEFELWR 375

Query: 356 EFSYNDYYNNL 366
            F Y DY N L
Sbjct: 376 TFGYEDYRNRL 386


>gi|317478905|ref|ZP_07938053.1| carboxynorspermidine decarboxylase [Bacteroides sp. 4_1_36]
 gi|316904939|gb|EFV26745.1| carboxynorspermidine decarboxylase [Bacteroides sp. 4_1_36]
          Length = 381

 Score =  256 bits (653), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 124/373 (33%), Positives = 195/373 (52%), Gaps = 9/373 (2%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y++++  L  NL     +   AGV+++LA K FA W  F    +Y+D +T+SS+YE
Sbjct: 10  PSPCYIMEEGLLRKNLALIKSVADRAGVEIILAFKSFAMWRSFPIFREYIDHSTASSVYE 69

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGL 120
             L  E+FG + H Y+ AY + +   ++     I FN++SQ ++F     A+      G+
Sbjct: 70  ARLALEEFGSKAHTYSPAYTEADFPEIMRCSSHITFNSLSQFHRFYPVVVAEGSGISCGI 129

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           RINP  S  +  L +P  P +R G       E     + G   H +CE+ S+      L+
Sbjct: 130 RINPEYSEVETELYNPCAPGTRFGVMADPLPEELPVGIEGFHCHCHCESSSYE-LEHTLE 188

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239
           ++E +F  + +QI+W++LGGG   T KDY V+   + L+    +YS  QI LEPG A   
Sbjct: 189 HLEGKFSRWFSQIKWLNLGGGHLMTRKDYDVEHLVRLLQGLKGRYSHLQIILEPGSAFTW 248

Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT----GPYTAMVCG 294
            T  L++ ++DI EN      + + S   H+PD L       +        GPY   + G
Sbjct: 249 QTGVLSSEIVDIVENRGIRTAILNVSFTCHMPDCLEMPYQPAVRGAEMGDAGPYVYRLGG 308

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            SCL+GD  G + F+  ++IG+RI FED+  Y   + N FNGI+ P IA+   +G  +  
Sbjct: 309 NSCLSGDYMGLWSFDHELQIGERIVFEDMIHYTTVKTNMFNGIHHPAIAMWTKEGKAEVF 368

Query: 355 REFSYNDYYNNLS 367
           ++FSY DY   +S
Sbjct: 369 KQFSYEDYRGRMS 381


>gi|255034946|ref|YP_003085567.1| carboxynorspermidine decarboxylase [Dyadobacter fermentans DSM
           18053]
 gi|254947702|gb|ACT92402.1| carboxynorspermidine decarboxylase [Dyadobacter fermentans DSM
           18053]
          Length = 385

 Score =  256 bits (653), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 116/379 (30%), Positives = 197/379 (51%), Gaps = 14/379 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I +P ++++++ L  NL+    +++ AG +++LALK F+ +  F  + +Y+ G T+SSL 
Sbjct: 8   IPSPCFILEEELLRKNLELIDSVQQAAGCQIILALKGFSMYSAFPIVKEYLSGATASSLN 67

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-------QKL 114
           EV L ++  G ++H Y  AY D E + ++     I FN++SQ  +F+ +           
Sbjct: 68  EVKLINDFMGYQSHTYMPAYLDGEFEEIMQRSSHITFNSLSQWERFQGRVEAYKAANPDK 127

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174
               G+R+NP  S     + +P  P SRLG       +     ++G+ FH  CEN S   
Sbjct: 128 TLSCGIRVNPQYSEVATDMYNPCVPGSRLGVTRDKLPDELPAGIDGIHFHTLCENGS-DT 186

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
               L  +E+ FG  + Q +W+++GGG   T + Y +    + +    EKY++++ LEPG
Sbjct: 187 LERTLAALEERFGDLLHQAKWLNMGGGHLMTREGYDISKLIKLVSTIKEKYNLEVILEPG 246

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-HVPDYLLYQESATIY-----PNTGPY 288
            AI   T  L T VLD+ ++    V +  +  A H+PD L       I      P  G  
Sbjct: 247 SAIAWRTGILYTMVLDVLDSQGIDVAILDTSFAAHMPDTLEMPYKPVIRGAYQDPEPGKP 306

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348
           T  + G +CLAGD  G++ F++P+  GD+I FED+  Y + +   FNG+N+P+I +   D
Sbjct: 307 TYRMGGMTCLAGDYMGDYSFDQPLAAGDKIIFEDMIHYTMVKTTTFNGVNLPSIGIWKAD 366

Query: 349 GTIKAIREFSYNDYYNNLS 367
              + +R + Y  + + LS
Sbjct: 367 QKFQLVRSYGYESFKDRLS 385


>gi|153806559|ref|ZP_01959227.1| hypothetical protein BACCAC_00829 [Bacteroides caccae ATCC 43185]
 gi|149131236|gb|EDM22442.1| hypothetical protein BACCAC_00829 [Bacteroides caccae ATCC 43185]
          Length = 366

 Score =  256 bits (653), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 116/367 (31%), Positives = 192/367 (52%), Gaps = 9/367 (2%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE 68
           ++++ L  NL     +   AGV+++LA K FA W  F    +Y+D +T+SS+YE  L  E
Sbjct: 1   MEEELLRKNLSLIKSVADRAGVEIILAFKSFAMWRSFPIFREYIDHSTASSVYEARLALE 60

Query: 69  KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHKKIGLRINPSV 126
           +FG + H Y+ AY + +   ++     I FN+++Q  +F     A+      G+R+NP  
Sbjct: 61  EFGSKAHTYSPAYTEQDFPEIMRCSSHITFNSMAQFERFYPMTVAKGGGISCGIRVNPEY 120

Query: 127 SYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF 186
           S  +  L +P  P +R G       ++  + + G   H +CE+ SF      L+++E++F
Sbjct: 121 SEVETELYNPCAPGTRFGITADLLPDTLPQGIEGFHCHCHCESSSFE-LERTLEHLEEKF 179

Query: 187 GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNTTTLN 245
             +  Q++W++LGGG   T KDY  +   + L+    +Y   +I LEPG A    T  L 
Sbjct: 180 SRWFPQLKWLNLGGGHLMTRKDYDTEHLIKLLQGLKARYPHLRIILEPGSAFTWQTGVLT 239

Query: 246 TTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRSCLAG 300
           + V+DI E+      + + S   H+PD L       +      N G Y   + G SCL+G
Sbjct: 240 SEVVDIVESRGIKTAILNVSFTCHMPDCLEMPYQPAVRGAEMGNEGKYIYRLGGNSCLSG 299

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           D  G + F+  ++IG+RI FED+  Y + + N FNGI+ P IA+   +G  +  ++FSY 
Sbjct: 300 DYMGLWSFDHELQIGERIVFEDMIHYTMVKTNMFNGIHHPAIALWTKEGKAEIYKQFSYE 359

Query: 361 DYYNNLS 367
           DY + +S
Sbjct: 360 DYRDRMS 366


>gi|329964808|ref|ZP_08301831.1| carboxynorspermidine decarboxylase [Bacteroides fluxus YIT 12057]
 gi|328524659|gb|EGF51722.1| carboxynorspermidine decarboxylase [Bacteroides fluxus YIT 12057]
          Length = 381

 Score =  256 bits (653), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 121/373 (32%), Positives = 195/373 (52%), Gaps = 9/373 (2%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+++++ L  NL     +   A V+++LA K FA W  F    +Y++ +T+SS+YE
Sbjct: 10  PSPCYIMEEELLRRNLALIKSVAHRADVEIILAFKSFAMWRSFPVFREYVEHSTASSVYE 69

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGL 120
             L  E+FG + H Y+ AY + +   ++     I FN+++Q N+F     A       G+
Sbjct: 70  ARLAMEEFGSKAHTYSPAYTEADFPEIMRCSSHITFNSLAQFNRFYPVTVAAGSGISCGV 129

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           RINP  S  +  L +P  P +R G       E   + + G   H +CE+ S+      L 
Sbjct: 130 RINPEYSEVETELYNPCAPGTRFGLMADQLPEVLPQGIEGFHCHCHCESSSYE-LERTLA 188

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239
           ++E +F  + +QI+W++LGGG   T KDY V+   + L+    +Y   +I LEPG A   
Sbjct: 189 HVEAKFSKWFSQIKWLNLGGGHLMTRKDYDVEHLIRLLQGLKARYPHLRIILEPGSAFTW 248

Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCG 294
            T  L + V+D+ EN      + + S   H+PD L      ++      N GPY   + G
Sbjct: 249 QTGVLTSEVVDVVENRGIRTAILNVSFTCHMPDCLEMPYQPSVRGARMGNEGPYVYRLGG 308

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            SCL+GD  G + F+  ++IG+RI FED+  Y + + N FNGI+ P IA+    G  +  
Sbjct: 309 NSCLSGDYMGLWSFDHELRIGERIVFEDMIHYTMVKTNMFNGIHHPAIAMWTKKGNAEIY 368

Query: 355 REFSYNDYYNNLS 367
           ++FSY DY + +S
Sbjct: 369 KQFSYEDYRDRMS 381


>gi|188994129|ref|YP_001928381.1| carboxynorspermidine decarboxylase [Porphyromonas gingivalis ATCC
           33277]
 gi|188593809|dbj|BAG32784.1| carboxynorspermidine decarboxylase [Porphyromonas gingivalis ATCC
           33277]
          Length = 378

 Score =  256 bits (653), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 117/372 (31%), Positives = 183/372 (49%), Gaps = 8/372 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I +P Y++++  L  NL     +    GV+++LA K +A W  F  + +Y+  +T+SS++
Sbjct: 7   IASPAYVLEEDLLRRNLSLIASVADRTGVEIILAFKAYALWRTFPIIREYVPHSTASSVW 66

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+ G   H ++ AY   E   +L     + FN++SQ        + +   +GLR
Sbjct: 67  EARLAFEEMGAPAHTFSPAYTPEEFPEILRYSSHVTFNSLSQYYLLSPMVKNVGVSLGLR 126

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP  S  +  L +P  P SR G    +  ++  + + GL FH  CE+  F      LK 
Sbjct: 127 INPEYSAVETALYNPCAPGSRFGVSASELGDTLPEGIEGLHFHTLCESTGFE-LEKTLKI 185

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240
           IE  F   + Q  W+++GGG   T +DY V+   Q L +FS ++    + +EPG A    
Sbjct: 186 IEDRFASVLEQARWLNMGGGHLMTRRDYDVEHLVQVLNDFSRRHPHLHLIMEPGSAFGWQ 245

Query: 241 TTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-----YTAMVCG 294
           T  L +TV+DI         IVD S   H+PD L       I            T  + G
Sbjct: 246 TGFLKSTVVDIVEHQGIATAIVDVSFTCHMPDCLEMPYKPVIRGAHQEPVPGLPTYRIGG 305

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            SCL+GD  G++ F++P+++GD + FED+  Y   +   FNG+  P I +   DG  + +
Sbjct: 306 CSCLSGDFIGDWSFDRPLQVGDELIFEDMLHYTTVKTTMFNGVRHPDIVLLRTDGKKEVL 365

Query: 355 REFSYNDYYNNL 366
           R F Y DY N +
Sbjct: 366 RRFDYEDYKNRM 377


>gi|291278645|ref|YP_003495480.1| diaminopimelate decarboxylase [Deferribacter desulfuricans SSM1]
 gi|290753347|dbj|BAI79724.1| diaminopimelate decarboxylase [Deferribacter desulfuricans SSM1]
          Length = 417

 Score =  256 bits (653), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 67/384 (17%), Positives = 124/384 (32%), Gaps = 22/384 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+     L  + +      +     +  A+K  +   + + L +   G    S  
Sbjct: 25  VGTPFYVYSAATLKRHFEVFDASFEEVPHIICFAVKANSNLAVLNLLGKLSCGADIVSGG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118
           E+          +   Y    K  E        D       +  +L K  + A +L KK 
Sbjct: 85  ELYRALKAGIDPKKIVYAGVGKTEEEIEFALKSDILMFNIESFQELEKINEVAGRLKKKA 144

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNC-- 167
              LR+NP+V              ++ G   ++  +            V G   H     
Sbjct: 145 RIALRVNPNVDPKTHPYISTGLKKNKFGIPIENAYQEYEYAASLDNIEVVGAHCHIGSQL 204

Query: 168 -ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSE 223
            E   F+  + ++ ++ K        I+++ LGGG+     +       ++  ++ +   
Sbjct: 205 TEISPFVDATKIMVDMIKTLKSKGINIKYLDLGGGLGIKYNEEMPPSPKEYADKIIDVIR 264

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQES---A 279
              V +  EPG  I  N   L T VL   E   K+  IVD+++   +   L         
Sbjct: 265 GLDVTLVFEPGRVIAGNAGVLVTRVLYTKETELKHFKIVDAAMNDLMRPILYGSFHDIKP 324

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
               +       + G  C  GD   +       + GD I+      Y     + +N    
Sbjct: 325 VKEGHYKTVYGDIVGPICETGDFLAKDRNLPDFQQGDLIAVMSAGAYGFTMSSNYNSRPR 384

Query: 340 PTIAVKNVDGTIKAIREFSYNDYY 363
               + N D      R  +Y+D  
Sbjct: 385 VPEILVNKDKYYIVRRRETYDDLI 408


>gi|320355119|ref|YP_004196458.1| carboxynorspermidine decarboxylase [Desulfobulbus propionicus DSM
           2032]
 gi|320123621|gb|ADW19167.1| carboxynorspermidine decarboxylase [Desulfobulbus propionicus DSM
           2032]
          Length = 394

 Score =  255 bits (652), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 130/375 (34%), Positives = 200/375 (53%), Gaps = 12/375 (3%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP +++D+  L +NL     +++  G K+LLALKCFA + +F  L Q +DG   SS +E 
Sbjct: 21  TPAFVVDEGLLADNLALLAQVKQATGCKILLALKCFAMFSVFPLLRQVLDGVCCSSPHEA 80

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK------ 117
            LG E+FG E H++  AY + +I+ +    D ++FN+  Q  +F+  A+   K+      
Sbjct: 81  RLGREEFGREVHSFAAAYSEHDIEQLAVTSDHLVFNSFGQWQRFRSLAETTAKRTGRELK 140

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
            GLR+NP  S     + DP  P SRLG + KD     +  ++GL +HN CE     C   
Sbjct: 141 FGLRVNPEHSEGATPIYDPCAPGSRLGIRRKDFRADLLDGISGLHWHNLCEQD-ADCLQR 199

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI 237
            +  +E+ F   I Q+ +I+ GGG H T   Y +      +  F +++ VQ+YLEPGEA+
Sbjct: 200 TVAAVERNFAEVIPQMAYINFGGGHHITRPGYQLDLLIDIVGRFQDRWGVQVYLEPGEAV 259

Query: 238 VTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----TGPYTAMVC 293
             N   L  TVLD+      + I+D+SV AH+PD L       I  +       +T  + 
Sbjct: 260 ALNAGYLVATVLDVVNADMPIAIIDASVPAHMPDVLEMPYRPHIVGSGEAGEKAWTCRIG 319

Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTIK 352
           G SCLAGD+ GE+ F+  +  GDR+ F D+A Y + + N FNG+ +P+I      D  + 
Sbjct: 320 GLSCLAGDVAGEYSFDAELAPGDRLVFTDMAIYTMVKTNTFNGVQLPSIMRYRPDDDELV 379

Query: 353 AIREFSYNDYYNNLS 367
            +R F Y ++   LS
Sbjct: 380 LVRRFGYEEFKTRLS 394


>gi|254427501|ref|ZP_05041208.1| diaminopimelate decarboxylase [Alcanivorax sp. DG881]
 gi|196193670|gb|EDX88629.1| diaminopimelate decarboxylase [Alcanivorax sp. DG881]
          Length = 413

 Score =  255 bits (652), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 65/386 (16%), Positives = 124/386 (32%), Gaps = 22/386 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP YL  +  L  +         +   ++  A+K  +   + + L +   G    S  E
Sbjct: 26  GTPLYLYSRAALERHYLAFDEAFGDHPHQVCYAVKANSNLAVLNVLARCGAGFDIVSGGE 85

Query: 63  VMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +          +   ++   K  D    A+ +N       + ++L      A +L +   
Sbjct: 86  LERVLRAGGDPDKIVFSGVGKTADEMAAALKANIHCFNVESAAELELLNLVAGELDREAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCENK 170
           I +R+NP V              ++ G          +   E     + G+  H   +  
Sbjct: 146 IAIRVNPDVDAQTHPYISTGLKDNKFGVDITKAPALYQRAAELPHIRILGIDCHIGSQLT 205

Query: 171 SFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
               F   L+ + K          +I  + LGGG+  T  D    D    ++   +    
Sbjct: 206 KLAPFEDALERVLKLLAQLQEHGIEIHHLDLGGGLGVTYDDETPPDRSAYVQALLKHIPG 265

Query: 228 --QIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIYPN 284
              +++EPG +I  N     T VL +         IVD ++   +   L       +   
Sbjct: 266 ELPVHIEPGRSIAANAGLFITQVLFLKPTEHKNFAIVDGAMNDLIRPSLYSAWQNIVPVK 325

Query: 285 TGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                     + G  C  GD  G+      ++ GD ++      Y     + +N  N P 
Sbjct: 326 PHDADCREWDIVGPVCETGDFLGKDRALS-LETGDLLAVRSAGAYGFAMASNYNSRNRPA 384

Query: 342 IAVKNVDGTIKAIREFSYNDYYNNLS 367
             + + D      +  +Y+D     S
Sbjct: 385 EIMVDGDQAFVVRQRETYDDQLKQES 410


>gi|83643199|ref|YP_431634.1| diaminopimelate decarboxylase [Hahella chejuensis KCTC 2396]
 gi|83631242|gb|ABC27209.1| diaminopimelate decarboxylase [Hahella chejuensis KCTC 2396]
          Length = 423

 Score =  255 bits (652), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 60/385 (15%), Positives = 123/385 (31%), Gaps = 24/385 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +L             +  A+K  +   + + L +   G    S+ E
Sbjct: 26  GTPCYIYSRATLERHLKAYQTAMDGYPHMICYAVKANSNLAVLNVLARLGAGFDIVSVGE 85

Query: 63  VMLGH-EKFGGETHAYNV-AYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +          E   ++     +     A+          +  +L + +  A        
Sbjct: 86  MERVLAAGGKPERIVFSGVGKLEHEMRRALEVGVHCFNVESAPELERLQQVAADMGKKAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           I +R+NP V              ++ G    + +E           +V G+  H   +  
Sbjct: 146 ISIRVNPDVDPQTHPYISTGLKENKFGVSIDEALELYHSAAVSPHLDVIGIDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
               F   L+    I +   +   +++ + LGGG+  T           + + + E  + 
Sbjct: 206 QISPFLDALERVLNIIETLRNEGIRLKHLDLGGGLGVTYNQETPPHPNEYARAVMERLKG 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + + LEPG +I  N   + T V  +  N  K+  IVD+++   +   L       +  
Sbjct: 266 SGLTLVLEPGRSIAANAGLMVTRVEYLKHNGHKDFAIVDAAMNDLIRPSLYGAWQNIVPV 325

Query: 284 NTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       + G  C  GD  G+      +K GD ++      Y     + +N    
Sbjct: 326 RQHSEGKEARYDIVGPVCETGDFIGKERLL-NLKPGDLLAVRSAGAYGFVMSSNYNSRGR 384

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
               + + D      R  +  + + 
Sbjct: 385 AAEVMVDGDKHYLVRRRETIEELFA 409


>gi|295101690|emb|CBK99235.1| carboxynorspermidine decarboxylase [Faecalibacterium prausnitzii
           L2-6]
          Length = 404

 Score =  255 bits (651), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 131/378 (34%), Positives = 192/378 (50%), Gaps = 14/378 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP YL+D+ +L  N +  L +++  G K+LLA K F+ + ++  L   + GT +S LY
Sbjct: 24  LPTPCYLLDEAQLRRNGEILLGVQQRTGCKILLAQKAFSNFDLYPLLAPCLAGTEASGLY 83

Query: 62  EVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           E  LG E+    E H +  AY+  E + +L   D I+FN+ +QL KF   A+   K +GL
Sbjct: 84  ESRLGKEELPEKENHVFCAAYRVDEFNELLDYADHIVFNSPAQLAKFGPAAKAAGKSVGL 143

Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSFL 173
           RINP  S      + DP  P SRLG        +  K       ++GL FH  CE     
Sbjct: 144 RINPERSTQEGHAIYDPCAPGSRLGTTRAQWDAALAKQPGLAALLDGLHFHTLCEQD-AD 202

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
             +  L  +E++FG  +  ++W++ GGG H T   Y +      +    EKY VQ+YLEP
Sbjct: 203 ALAVTLDAVEEKFGDLLPGLKWLNFGGGHHITRPGYDLAALEACIARMQEKYGVQVYLEP 262

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIY----PNTGPY 288
           GEA   N   L TTVLD  +N    + + D S   H PD +       +     P   P 
Sbjct: 263 GEAWALNAGYLVTTVLDTLQNGNTSLAILDMSAACHTPDVIEMPYRPPLLDAGEPGEKPC 322

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348
           T  + G +CLAGD+ G++ F+ P+  GDR+ F D+A Y   + N FNG+ +P I     D
Sbjct: 323 TIRLGGPTCLAGDVVGDYSFDAPLAEGDRLLFGDMAIYTTCKNNTFNGMPLPPIWALAED 382

Query: 349 GTIKAIREFSYNDYYNNL 366
           GT + +  F YND+   L
Sbjct: 383 GTCRELVRFGYNDFKMRL 400


>gi|120553431|ref|YP_957782.1| diaminopimelate decarboxylase [Marinobacter aquaeolei VT8]
 gi|120323280|gb|ABM17595.1| diaminopimelate decarboxylase [Marinobacter aquaeolei VT8]
          Length = 416

 Score =  255 bits (651), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 65/382 (17%), Positives = 129/382 (33%), Gaps = 24/382 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +        KN    +  A+K  +   + + L +   G    S  E
Sbjct: 26  GTPAYIYSRATLERHYRAYDEALKNRPHLVCYAVKANSNLAVLNVLARLGAGFDIVSAGE 85

Query: 63  VMLG-HEKFGGETHAYNV-AYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++    ++ E+  A+ +        + ++L++    A +L     
Sbjct: 86  LERVLRAGGDAGKVVFSGVGKQEWEMKRALEAGVRCFNVESDTELDRLNKVAGELGVKAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G    +              +++G+  H   +  
Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIDIAEAPAVYARAASLPNLDIHGVDCHIGSQLT 205

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
           S   F   L  +            +I  + +GGG+  T            +K  +E+   
Sbjct: 206 SVSPFLDALGRVLSLIDTLAEQGIRIRHLDMGGGLGVTYNQETPPQPADYVKALNERMGD 265

Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATI-- 281
           +   + LEPG +I  N   L T V  +         I+D+++   +   L     A I  
Sbjct: 266 RELELVLEPGRSIAANAGILVTRVEFLKCTEHRNFAIIDAAMNDLIRPALYSAWQAIIPV 325

Query: 282 --YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
             + ++      + G  C  GD  G+    + +K GD ++      Y     + +N  N 
Sbjct: 326 QPHQDSEERPWDLVGPVCETGDFLGKDRALR-LKAGDLLAVRSAGAYGFVMASNYNTRNR 384

Query: 340 PTIAVKNVDGTIKAIREFSYND 361
           P   + + D      R  + +D
Sbjct: 385 PPELMVDGDQVHVVRRRETLDD 406


>gi|257439172|ref|ZP_05614927.1| carboxynorspermidine decarboxylase [Faecalibacterium prausnitzii
           A2-165]
 gi|257198423|gb|EEU96707.1| carboxynorspermidine decarboxylase [Faecalibacterium prausnitzii
           A2-165]
          Length = 404

 Score =  255 bits (651), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 129/378 (34%), Positives = 197/378 (52%), Gaps = 14/378 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP YL+D+ +L  N +  L +++  G K+LLA K F+ + ++  L  Y+ GT +S LY
Sbjct: 24  LPTPCYLLDEARLRRNGEILLGVQQRTGCKILLAQKAFSNYDLYPVLAPYLAGTEASGLY 83

Query: 62  EVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           E  LG E+    E H +  AY+  + + +L   D I+FN+  QL KF   A+   K +GL
Sbjct: 84  ESRLGREELPEKENHVFCAAYRADQFEELLQYADHIVFNSPHQLAKFGPAAKAAGKSVGL 143

Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSFL 173
           R+NP  S      + DP  P SRLG        +  ++      ++GL FH  CE  S  
Sbjct: 144 RVNPEHSTQEGHEIYDPCAPGSRLGTTRAQWDAAAAQHPDLPDLLDGLHFHTLCEQDSDA 203

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
             + +    E +FG  + +++W++ GGG H T  DY +    + +    EKY VQ+YLEP
Sbjct: 204 LAATLPAL-EAKFGDLLPRMKWLNFGGGHHITRPDYDLATLEKCITGTQEKYGVQVYLEP 262

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIY----PNTGPY 288
           GEA   N   L TTVLD  +N +  + + D S   H PD +       +     P   P 
Sbjct: 263 GEAWALNAGYLVTTVLDTLQNGETHLAILDMSAACHTPDVIEMPYRPPLLDAGEPGEKPC 322

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348
           T  + G +CLAGD+ G + F  P+  GDR+ F D+A Y+  + N FNG+ +P I V + +
Sbjct: 323 TFRLGGPTCLAGDVVGNYSFAAPLTEGDRLIFGDMAIYSTCKNNTFNGMPLPDIWVLHEN 382

Query: 349 GTIKAIREFSYNDYYNNL 366
           GT + +  F Y+D+   L
Sbjct: 383 GTTQPLARFGYHDFKYRL 400


>gi|89091913|ref|ZP_01164868.1| diaminopimelate decarboxylase [Oceanospirillum sp. MED92]
 gi|89083648|gb|EAR62865.1| diaminopimelate decarboxylase [Oceanospirillum sp. MED92]
          Length = 418

 Score =  255 bits (651), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 58/385 (15%), Positives = 120/385 (31%), Gaps = 24/385 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L           +     +  A+K  +   + + L +   G    S+ E
Sbjct: 26  GTPTYVYSRDALERAYLAYADALEGHKSLVCYAVKANSNLAVLNVLARLGAGFDIVSVGE 85

Query: 63  VMLG-HEKFGGETHAYNV-AYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++    +  E   A+          + ++L +  + A    K   
Sbjct: 86  LERVLRAGGDAAKIVFSGVGKQPHEIQRALEVGIRCFNIESEAELERVNEVAGSEGKVAA 145

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           +  R+NP V              ++ G    D +         +  +V G+  H   +  
Sbjct: 146 ISFRVNPDVDAGTHPYISTGLKENKFGIDIDDAVRIYSRAADMDHVDVVGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--- 224
               F   L  +     +      +I+ + LGGG+     D       + + E  +K   
Sbjct: 206 EVDPFLDALDRVLMLVDKIAEQGIKIKHLDLGGGLGVCYTDEVPPTPQEYIAEVLKKVEG 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++  EPG +I  N   + T V  +     KN  I+D ++   +   L       +  
Sbjct: 266 RDLELIFEPGRSIAANAGVMLTRVEFLKCTGEKNFAIIDGAMNDLIRPSLYSAYQEIVPV 325

Query: 284 N----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       + G  C  GD  G+      ++ GD ++      Y     + +N    
Sbjct: 326 MLRETGEEQQWDLVGPVCETGDFLGKDRSL-NLEAGDLLAVCSAGAYGFVMASNYNSRGR 384

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
           P   + + + +    +  S  D   
Sbjct: 385 PAEVMIDDNKSYLIRKRESLADLVK 409


>gi|224372172|ref|YP_002606544.1| carboxynorspermidine decarboxylase [Nautilia profundicola AmH]
 gi|223588820|gb|ACM92556.1| carboxynorspermidine decarboxylase [Nautilia profundicola AmH]
          Length = 371

 Score =  255 bits (651), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 150/372 (40%), Positives = 216/372 (58%), Gaps = 9/372 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y+I+++ L  NL     ++K A  K+L+ALK +A W  FD L +Y+ G T+S L+
Sbjct: 3   INTPAYVIEEKLLEKNLKVLDRVQKEADAKILVALKGYATWSTFDLLEKYLSGATASGLW 62

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L + K   E H Y  A+KD EID V     T++FN+ +QL +F+++ +     IGLR
Sbjct: 63  EAKLANMK-PWEVHTYCPAFKDSEIDEVADISHTVVFNSFNQLERFENRVKDKSL-IGLR 120

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP VS S   L DP  PFSRLG    +    ++KNV+GL FH  CE          L+ 
Sbjct: 121 VNPGVSSSPVPLYDPCAPFSRLGIPKVNFKADKLKNVSGLHFHALCEQL-DDALERTLEG 179

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV--QIYLEPGEAIVT 239
            EK +G ++  +EW++ GGG H T + Y V+   + +K F  +Y     +YLEPGEA+  
Sbjct: 180 FEKLYGEYLKDMEWVNFGGGHHITREGYDVEHLIEMIKAFRSRYPNIKDVYLEPGEAVGL 239

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGR 295
           N   L   VLDI +N   + I+D+S EAH+PD L       +     PN   YT  + G 
Sbjct: 240 NAGYLVAEVLDIIDNGMKIAILDTSAEAHMPDVLAMPYRPVVRGAGEPNEKKYTYRLGGV 299

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           +CLAGD+ G++ F+KP++IGD++ FED+A Y + +   FNGI +P I +K  DG+I   R
Sbjct: 300 TCLAGDVIGDYSFDKPLEIGDKVIFEDMAIYTMVKNTAFNGIKLPDIIIKRKDGSIYKAR 359

Query: 356 EFSYNDYYNNLS 367
           EF Y D+ N LS
Sbjct: 360 EFHYEDFKNRLS 371


>gi|320102687|ref|YP_004178278.1| diaminopimelate decarboxylase [Isosphaera pallida ATCC 43644]
 gi|319749969|gb|ADV61729.1| diaminopimelate decarboxylase [Isosphaera pallida ATCC 43644]
          Length = 472

 Score =  255 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 59/398 (14%), Positives = 115/398 (28%), Gaps = 36/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +   L  L+    +       +  ++K  +   +   L  +  G    S  E
Sbjct: 29  GTPLYVYSRAAFLAALEELQSVFAEFDPVICYSVKANSNLSVLKMLAAHGSGFDVVSSGE 88

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +    E         +    K  E  A    S        + ++L+     +    L   
Sbjct: 89  LRRVEEAGGDPGRTVFAGVGKTDEEIAHALKSGVLMFNVESEAELDAIDRVSREHGLQAP 148

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCENK 170
           +  R+NP V              S+ G          +   +     V GL  H   +  
Sbjct: 149 VAPRVNPDVDPQTHRYISTGHKESKFGMDITRALRLTERARDMAGIKVVGLHMHIGSQIT 208

Query: 171 SFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEK 224
               ++                   I+W++LGGG        +  P+  +   +      
Sbjct: 209 KTQPYADAAAKAADLVATMRGQGHAIQWLNLGGGFGIDYRGGEAQPITAYAAVMAPAIRA 268

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQES----- 278
              ++ LEPG  +  N   L + V+    +  K  +I D+++   +   L          
Sbjct: 269 SGCRLALEPGRRVAGNAGVLLSRVIFTKVSGDKRFLIQDAAMNDLLRPSLYQAFHKIWPV 328

Query: 279 ------------ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
                                    V G  C +GD   +     P++ GD ++      Y
Sbjct: 329 EASMQPPDIPAGHDGSQPGASDAWDVVGPVCESGDFLAKDRPLPPLERGDLLAVFSAGAY 388

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            +   + +N    P   +   +      R  +Y+D   
Sbjct: 389 GMVMASNYNTRPRPAEVLVEGNHARLIRRRETYDDLVA 426


>gi|319956050|ref|YP_004167313.1| diaminopimelate decarboxylase [Nitratifractor salsuginis DSM 16511]
 gi|319418454|gb|ADV45564.1| diaminopimelate decarboxylase [Nitratifractor salsuginis DSM 16511]
          Length = 407

 Score =  255 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 58/387 (14%), Positives = 125/387 (32%), Gaps = 25/387 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D  ++  N          +   +  A+K  +   +     +   G    SL E
Sbjct: 13  GTPLYVYDFDQMRENYRRLKEAFAGSKSLIAYAVKANSNLSVISLFGKLGAGADCVSLGE 72

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
           ++             ++   K  +            I   + +++++ ++ AQ+L ++  
Sbjct: 73  ILRARTAGIEPYRIIFSGVGKRDDEIEAALKEGILMINLESEAEMHRVEEVAQRLGQEAR 132

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           +  R+NP+V              ++ G +                 +  G+ FH   +  
Sbjct: 133 ISIRVNPNVDPQTHPYISTGLHENKFGVEIDRAKRMYIYAKNSDWLDPVGIHFHIGSQLT 192

Query: 171 SFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                     ++ ++ +       +I +  +GGG+    +D     V+++ + + E  + 
Sbjct: 193 ELEPIKEAASIVADLVRSLAAIGIEIRFFDVGGGLGVVYRDETPIDVEEYAKVITESIKG 252

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----- 278
             + I  EPG  +  N   L T VL   +   K  VIVD+++   +   L          
Sbjct: 253 LDLTIICEPGRYLTANAGWLLTRVLYEKNNGAKRFVIVDAAMNDLMRPTLYQAYHGVEYL 312

Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                       A + G  C +GD   +     P + GD ++      Y     + +N  
Sbjct: 313 EPDAKERGEATPADLVGPICESGDWLAKERLLPPTRSGDLLAIRSAGAYGFTMASNYNTR 372

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
             P                 ++ D   
Sbjct: 373 GRPAEVACEQGQCRLIRDRENFEDQIR 399


>gi|298373786|ref|ZP_06983775.1| carboxynorspermidine decarboxylase [Bacteroidetes oral taxon 274
           str. F0058]
 gi|298274838|gb|EFI16390.1| carboxynorspermidine decarboxylase [Bacteroidetes oral taxon 274
           str. F0058]
          Length = 387

 Score =  255 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 124/374 (33%), Positives = 190/374 (50%), Gaps = 10/374 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I +P ++ID++ L  NLDT   + + AGV++++A K FA W +F  + +Y+  TT+SSL 
Sbjct: 14  IPSPCFVIDERLLRQNLDTIAQVSRRAGVEIIMAFKAFAMWKVFPIIKEYVTHTTASSLA 73

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  +KFG + H Y  AY D E D ++     I FN+++Q  K+  + Q      GLR
Sbjct: 74  EARLSVDKFGNKAHLYAPAYTDGEFDELVECSTHITFNSLAQFEKYYGRTQGRDISCGLR 133

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP +S  +  L +P +  SRLG   +   E     V GL FH  CEN SF     ++  
Sbjct: 134 INPEISVVETDLYNPAKAGSRLGITAEQLPEKLPDGVEGLHFHVLCENSSFDLEKVLVGL 193

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240
              +F   + Q++W+++GGG   T K Y +    + +  F +KY    I LEPG A V  
Sbjct: 194 -ADKFDRQLRQVKWLNMGGGHLMTRKGYNINHLIEVISAFRQKYPHLHIILEPGAAFVWQ 252

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVE-AHVPDYLLYQESATIYPNTGPYT-------AMV 292
           T  L   V DI EN      + +     H+PD L       IY                +
Sbjct: 253 TGILKAQVEDIVENHGIRTAMLNVSFACHMPDCLEMPYQPRIYGAEMTQPDAQGNNVYRM 312

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352
            G SCL+GD  G + F KP+ +GD I FED+  Y   +   FNG++ P+I +   +G   
Sbjct: 313 GGNSCLSGDFVGSWVFPKPLVVGDIIIFEDMIHYTTVKTTMFNGVSHPSIGIVKENGEFV 372

Query: 353 AIREFSYNDYYNNL 366
            +++F++ DY++ +
Sbjct: 373 LLKQFTHQDYFDRM 386


>gi|212551101|ref|YP_002309418.1| carboxynorspermidine decarboxylase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212549339|dbj|BAG84007.1| carboxynorspermidine decarboxylase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 380

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 124/375 (33%), Positives = 200/375 (53%), Gaps = 10/375 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I +P Y+I+++ L  NL     +++ AG+K++LA K FA W  F  + +Y++ + +SS +
Sbjct: 7   IPSPAYVIEEKLLRKNLSLIKSVQEQAGIKIILAFKAFAMWKSFPIIREYVNYSAASSAW 66

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKIG 119
           E  L  EK G + H Y+ AY + E   + S    I FN++SQ  +F  K          G
Sbjct: 67  EARLALEKMGSKAHTYSPAYTEEEFPVIKSCSSHITFNSMSQFYRFYKKTLNNLTKISCG 126

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           LRINP  S  +  L +P    SRLG   ++   +  + + GL FH   E+ S+      L
Sbjct: 127 LRINPEYSEVRTSLYNPVVSGSRLGITREELGNNLPEGIEGLHFHTLFESNSYA-LENTL 185

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238
            ++E +FG   ++I+W+++GGG   T ++Y +    + L+ F +KY   QI LEPG A V
Sbjct: 186 NHVEDKFGDLFSKIKWLNMGGGHLITQENYSITHLIELLQNFRKKYPHLQIILEPGAAFV 245

Query: 239 TNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIY-----PNTGPYTAMV 292
             T  L ++V+DI +N +    + + S   H+PD L       I         G  T  +
Sbjct: 246 WQTGVLVSSVVDIVKNNRVETAILNISFTCHMPDCLEMPYQPRIRGALQKVIEGKPTYRM 305

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352
            G SCL+GD  G++ F + +KIGD+I FED+  Y + +   FNGI  P I +  ++  ++
Sbjct: 306 GGNSCLSGDFIGDWSFNEELKIGDKIIFEDMIHYTVVKTTMFNGIPHPDIYIWKINDKLE 365

Query: 353 AIREFSYNDYYNNLS 367
             R+F+Y+DY N +S
Sbjct: 366 IYRKFNYDDYKNRMS 380


>gi|94499814|ref|ZP_01306350.1| carboxynorspermidine decarboxylase [Oceanobacter sp. RED65]
 gi|94428015|gb|EAT12989.1| carboxynorspermidine decarboxylase [Oceanobacter sp. RED65]
          Length = 399

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 128/387 (33%), Positives = 203/387 (52%), Gaps = 23/387 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P +++D+  +  NL    ++++ +G K+L ALK F+ + +     QY+ GT SS L+
Sbjct: 14  LPSPCFVVDEVAIERNLKILHHVQEQSGAKVLQALKAFSMYHLAPLSRQYLSGTCSSGLH 73

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK---- 117
           E +LG E +GGE H ++ AY + ++  +L     I+FNT SQ+ +F    +   +K    
Sbjct: 74  EALLGQEYYGGEVHVFSAAYSEDDLVRLLEFAHHIVFNTPSQILRFYPLLKAAQEKRDDL 133

Query: 118 -IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN--------VNGLMFHNNCE 168
             GLRINP  S     + DP    SRLG    + +++   +        V+GL FH  CE
Sbjct: 134 SFGLRINPEHSEGAVPIYDPCAAGSRLGTTQDELMQALQTDEFHQAFHLVSGLHFHTLCE 193

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
              F      LK +E+ F  ++ Q+ W++ GGG H T  DY +      ++   +KYSV 
Sbjct: 194 QG-FKPLQRTLKAVEERFAKWLPQMTWLNFGGGHHITAPDYDIHGLVNAIRLIKQKYSVD 252

Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN---- 284
           +YLEPGEA+   +  L+  VLDI  N     I+D+S   H+PD L       I  N    
Sbjct: 253 VYLEPGEAVAIGSGILSAEVLDIGFNQLPQAILDTSATCHMPDTLEMPYRPDIRFNNELA 312

Query: 285 ----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                  Y     G +CLAGD+ G++ FE+ +K+GDR+ FED+A Y + +   FNG  +P
Sbjct: 313 GMADEKRYNYRFGGLTCLAGDVIGDYSFEQELKVGDRLIFEDMAHYTMVKTTTFNGTKLP 372

Query: 341 TIAVKNVD-GTIKAIREFSYNDYYNNL 366
            +A+ N     +  +R FSY+D+ + L
Sbjct: 373 ALAIWNSQTDDLNVVRVFSYDDFKSRL 399


>gi|206889561|ref|YP_002248957.1| diaminopimelate decarboxylase [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206741499|gb|ACI20556.1| diaminopimelate decarboxylase [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 418

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 66/385 (17%), Positives = 126/385 (32%), Gaps = 22/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+     L+ ++             +  A+K  +   +     +   G    S  E
Sbjct: 26  GTPLYIYSYGTLIRHIRAYEEAFCEVPHIICYAVKANSNLAILRIFAELGIGADIVSGGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +              +    K  E       +N       + ++L+K  +KA+ L K   
Sbjct: 86  LFKALKAGIKPYKIVFAGVGKTDEEIEYALKNNILMFNVESEAELHKINEKAKNLKKVAS 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           + LR+NP +              S+ G   +  ++        +   V G+  H   +  
Sbjct: 146 VALRVNPDIDPKTHKYIATGLKSSKFGIPIEKALDYYKLAKSMKNIKVIGIHKHIGSQIT 205

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDF---CQRLKEFSEK 224
               +   L  I     +  ++  +IE+I +GGG+  T +D            L    + 
Sbjct: 206 ETSAYVEALNKILSLYDQLANYDMEIEYIDIGGGLGITYRDEEPPHPKELADVLIPLVKN 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP 283
              ++ +EPG +IV N   L T VL   E  +   I+ D+ +   +   L          
Sbjct: 266 KKGKLIIEPGRSIVGNAGILVTKVLYTKETEQKNFIIVDAGMNDLIRPTLYGSYHEIQPV 325

Query: 284 NTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
             G      A + G  C +GD   +    + V  G+ ++      Y  +  + +N     
Sbjct: 326 TPGKKEKIVADIVGPICESGDFLAKDREIEKVSAGEYLAVMSAGAYGFSMSSNYNSRPRV 385

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              +   D      +  +Y D   N
Sbjct: 386 AEVLVKGDQYALIRKRETYKDLIRN 410


>gi|242309951|ref|ZP_04809106.1| carboxynorspermidine decarboxylase NspC [Helicobacter pullorum MIT
           98-5489]
 gi|239523248|gb|EEQ63114.1| carboxynorspermidine decarboxylase NspC [Helicobacter pullorum MIT
           98-5489]
          Length = 403

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 138/392 (35%), Positives = 211/392 (53%), Gaps = 27/392 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I +P Y+++++K + NL+    I+K +G K+LLALK +A W  F+   +Y+ G T+S LY
Sbjct: 13  IPSPCYVLEEEKFIKNLEILDSIQKQSGAKILLALKGYALWRSFEIAKKYLSGVTASGLY 72

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI--- 118
           E  LG+E FGGE   ++ +YK  E+  ++   + IIFN+  Q   FK    + +K     
Sbjct: 73  EAKLGYETFGGEITTFSPSYKKEEMQELVKISNHIIFNSFVQWQTFKPMIDEANKMRENK 132

Query: 119 ---GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVNGLMFHNNCENKS 171
              GLR+NP  S     + +P    SRLG   K+  +   K     ++GL FH +CE  S
Sbjct: 133 IEVGLRVNPLYSEVTPEIYNPCIEGSRLGIPPKEFKKGVKKYGLEGISGLHFHTHCEQNS 192

Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYL 231
                  LK+  K FG +I Q++WI+ GGG H T KDY  +   + +K F +K+  ++YL
Sbjct: 193 DALKRT-LKHFIKHFGDYIPQMQWINFGGGHHITRKDYDRELLVKIIKNFKDKFHTEVYL 251

Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN------- 284
           EPGEA+      L  +V+DI  N  ++ I+D S  AH+PD L       +  +       
Sbjct: 252 EPGEAVGWQCGFLIGSVIDIVHNGVDIAILDVSAAAHMPDCLEMPYRPMVRNSYGVKAVQ 311

Query: 285 ---------TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                       Y+    G +CLAGDI G++ F +P+KIGDRI FED+  Y I + N FN
Sbjct: 312 KNGHLKLKGEKKYSYRFGGPTCLAGDIIGDYSFREPLKIGDRIIFEDMVHYTIVKNNTFN 371

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367
           GI +P+I + + +G  +  + +SY DY +  S
Sbjct: 372 GIPLPSIGMIDKEGKFQIFKSYSYEDYKHRNS 403


>gi|212703833|ref|ZP_03311961.1| hypothetical protein DESPIG_01885 [Desulfovibrio piger ATCC 29098]
 gi|212672801|gb|EEB33284.1| hypothetical protein DESPIG_01885 [Desulfovibrio piger ATCC 29098]
          Length = 409

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 131/398 (32%), Positives = 202/398 (50%), Gaps = 33/398 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQY-----MDGTT 56
           + +P +++D+ +L  N      +++  G K+LLALK FAAW  F  L++      + GT 
Sbjct: 13  VPSPCFVLDEARLAANAAILDSVQQRTGAKILLALKGFAAWDSFSLLSRAKGHGPLWGTC 72

Query: 57  SSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
           +SS+ E  LG E+FGGE HA+   + + E+D +L   D ++FN+++Q  +F  K +   +
Sbjct: 73  ASSVDEARLGREEFGGEVHAFAAGWTEEELDELLPLVDHLVFNSLAQWERFGPKVRDWCR 132

Query: 117 K------IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170
                   GLRINP  S     + +P  P SRLG +     E+  + ++GL FH  CE  
Sbjct: 133 DNGREISCGLRINPEHSEGAVAIYNPCSPGSRLGIRPHQLPETLPEGISGLHFHTLCEQG 192

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY 230
           S       L  +E  FG  + Q +WI+ GGG H T + Y +   C+ +    + Y  QIY
Sbjct: 193 S-DALERTLDAVEARFGKQLAQCKWINFGGGHHITREGYDLDRLCRCITRMQQNYGAQIY 251

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY-------- 282
           LEPGEA+  N   L  TVLD+ +    + I+D+S   H+PD L       +         
Sbjct: 252 LEPGEAVALNAGWLVATVLDVVQADMPIAILDTSASCHMPDVLEMPYRPNLLAPEDGELR 311

Query: 283 ----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
                   P+T  + G+SCLAGD+ GE+ F  P+K GDR+ F D+A Y++ +   FNG+ 
Sbjct: 312 LAGENGEKPWTCRLAGKSCLAGDVIGEYSFAAPLKAGDRLIFTDMAIYSMVKTTTFNGLR 371

Query: 339 MPTI---------AVKNVDGTIKAIREFSYNDYYNNLS 367
           +P+I         A        + +R F Y D+   LS
Sbjct: 372 LPSIGSLAADLDAAAPAATARFRLVRRFGYEDFKTRLS 409


>gi|313142454|ref|ZP_07804647.1| diaminopimelate decarboxylase dap decarboxylase [Helicobacter
           canadensis MIT 98-5491]
 gi|313131485|gb|EFR49102.1| diaminopimelate decarboxylase dap decarboxylase [Helicobacter
           canadensis MIT 98-5491]
          Length = 397

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 67/384 (17%), Positives = 121/384 (31%), Gaps = 22/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP ++ D  K+    +            +  ALK  +   +   L     G    SL E
Sbjct: 8   QTPLFVYDFDKIEEYFNQFKLAFSGRKSLICYALKANSNLSVIKKLASLESGVDCVSLGE 67

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
           +              Y+   K               I   +  +L K +  A+ L+ K  
Sbjct: 68  IKRAILAGIPTYKIIYSGVGKQDYEIQEAIKLGILFINIESKEELLKVESIAKTLNTKAR 127

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170
           +  R+NP +              ++ G   ++         +SE     G+ FH   +  
Sbjct: 128 ISIRVNPDIDPQTHPYISTGLKENKFGIGVEEAKSLYLYAHKSESLEPIGIHFHIGSQIT 187

Query: 171 SFLCFSAMLKNIEKEFGHFI---TQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                +   + I +     +     I++  +GGG+  T KD       D+ Q + E    
Sbjct: 188 KLQPIAESAQKIAQLLHSLLALKIDIKFFDIGGGLGITYKDETTINPYDYAQSILECLRG 247

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES---AT 280
             V I  EPG  I+ N+    T VL       K  VIV+ ++   +   L          
Sbjct: 248 LDVTIICEPGRFIMGNSGVFLTQVLYEKISQEKRFVIVNGAMNDLIRPSLYNAYHKITPL 307

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                      + G  C +GD  G+     P+K GD ++      Y  +  + +N     
Sbjct: 308 NPREGELAPTDIVGPICESGDYLGKNIALPPLKAGDILAILSAGAYGFSMSSNYNTRPRC 367

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
                +        +  ++ D   
Sbjct: 368 AEVAISQGKARLIRKRETFEDLIA 391


>gi|224418942|ref|ZP_03656948.1| diaminopimelate decarboxylase [Helicobacter canadensis MIT 98-5491]
 gi|253827889|ref|ZP_04870774.1| diaminopimelate decarboxylase [Helicobacter canadensis MIT 98-5491]
 gi|253511295|gb|EES89954.1| diaminopimelate decarboxylase [Helicobacter canadensis MIT 98-5491]
          Length = 418

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 67/384 (17%), Positives = 121/384 (31%), Gaps = 22/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP ++ D  K+    +            +  ALK  +   +   L     G    SL E
Sbjct: 29  QTPLFVYDFDKIEEYFNQFKLAFSGRKSLICYALKANSNLSVIKKLASLESGVDCVSLGE 88

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
           +              Y+   K               I   +  +L K +  A+ L+ K  
Sbjct: 89  IKRAILAGIPTYKIIYSGVGKQDYEIQEAIKLGILFINIESKEELLKVESIAKTLNTKAR 148

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170
           +  R+NP +              ++ G   ++         +SE     G+ FH   +  
Sbjct: 149 ISIRVNPDIDPQTHPYISTGLKENKFGIGVEEAKSLYLYAHKSESLEPIGIHFHIGSQIT 208

Query: 171 SFLCFSAMLKNIEKEFGHFI---TQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                +   + I +     +     I++  +GGG+  T KD       D+ Q + E    
Sbjct: 209 KLQPIAESAQKIAQLLHSLLALKIDIKFFDIGGGLGITYKDETTINPYDYAQSILECLRG 268

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES---AT 280
             V I  EPG  I+ N+    T VL       K  VIV+ ++   +   L          
Sbjct: 269 LDVTIICEPGRFIMGNSGVFLTQVLYEKISQEKRFVIVNGAMNDLIRPSLYNAYHKITPL 328

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                      + G  C +GD  G+     P+K GD ++      Y  +  + +N     
Sbjct: 329 NPREGELAPTDIVGPICESGDYLGKNIALPPLKAGDILAILSAGAYGFSMSSNYNTRPRC 388

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
                +        +  ++ D   
Sbjct: 389 AEVAISQGKARLIRKRETFEDLIA 412


>gi|325957878|ref|YP_004289344.1| diaminopimelate decarboxylase [Methanobacterium sp. AL-21]
 gi|325329310|gb|ADZ08372.1| diaminopimelate decarboxylase [Methanobacterium sp. AL-21]
          Length = 428

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 71/392 (18%), Positives = 135/392 (34%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ID+ ++ +N        K      K+  A K      +   L     G  + S 
Sbjct: 28  GTPLYVIDENRIRDNYKRLYNAFKDYYPNFKMFYACKANTNLAVMKILENEGSGIDAVSP 87

Query: 61  YEVMLGH-EKFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E+       F  E   Y      D E+   + +   +  +++SQL +     +    +I
Sbjct: 88  GEIYTSLLAGFEPERILYTGNNVTDEELKFAVESGVRLNLDSISQLKRLSKIPEAKGMEI 147

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSF 172
             R+NP V            P S+ G K ++ +E     +       G+  H        
Sbjct: 148 SFRVNPMVGAGHHDHCITGGPLSKFGIKEEEAVEVYKMAIELGFKPVGIHSHIGSGILDP 207

Query: 173 LCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRL----KE 220
             F      ++    K       + ++I  GGGI            + DF +++    K 
Sbjct: 208 EPFMLAVRTLMDTAGKVHKEAGVEFDFIDFGGGIGIPYTPEESKLDINDFAEKIVDLYKA 267

Query: 221 FSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
             E+Y      + +EPG  +V + + L T V  I ++ +    VD+     +   +    
Sbjct: 268 KLEEYDLGTPTMCIEPGRYLVGDASVLLTKVNTIKQSYRKFAGVDAGFNTLLRPTMYGSY 327

Query: 278 SATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
              +  +        T  + G  C +GD+F        ++ GD ++  +   Y  +  + 
Sbjct: 328 HHIVSASTPLAESTQTIDIAGDVCESGDLFARERPMPEIEEGDILAILNAGAYAFSMASQ 387

Query: 334 FNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           +N    P   + N   T       ++ D +N 
Sbjct: 388 YNSRPKPAEVLVNNGETDVIRERETFADLFNK 419


>gi|126666600|ref|ZP_01737578.1| diaminopimelate decarboxylase [Marinobacter sp. ELB17]
 gi|126628988|gb|EAZ99607.1| diaminopimelate decarboxylase [Marinobacter sp. ELB17]
          Length = 416

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 60/382 (15%), Positives = 120/382 (31%), Gaps = 24/382 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +        +N    +  A+K  +   + D L +   G    S  E
Sbjct: 26  GTPAYVYSRATLERHYRAYDNALQNHPHLVCYAVKANSNLAVLDVLARLGAGFDIVSAGE 85

Query: 63  V-MLGHEKFGGETHAYNV-AYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +  +           ++    +      A+          +  +L++    A +L     
Sbjct: 86  LERVIRAGGNPAKVVFSGVGKQPWEMRRALEVGVRCFNVESDIELDRLNAIAGELGVKAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G   +               +V G+  H   +  
Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIDIEVAPAIYARAASLPHLDVRGVDCHIGSQLT 205

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
           +   F   L  +     +      +I+ + LGGG+  T  D       + ++    +   
Sbjct: 206 TVAPFLDALDRVLALVDKLAEQGVEIKHLDLGGGLGVTYNDETPPQPGEYVEAILARLGD 265

Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIYP 283
           +   + LEPG +I  N   L T V  +         I+D+++   +   L     A +  
Sbjct: 266 RKLELILEPGRSIAANAGVLLTRVEFLKCTEHRNFAIIDAAMNDLIRPALYGAWQAIVPV 325

Query: 284 NTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       + G  C  GD  G+      +  GD ++      Y     + +N  N 
Sbjct: 326 APHSNGDEKAWDLVGPVCETGDFLGKDRQLS-LNAGDLLAVRSAGAYGFVMSSNYNTRNR 384

Query: 340 PTIAVKNVDGTIKAIREFSYND 361
           P   + + D      R  +  +
Sbjct: 385 PPELMVDGDQVHVVRRRETVEE 406


>gi|307292863|ref|ZP_07572709.1| Orn/DAP/Arg decarboxylase 2 [Sphingobium chlorophenolicum L-1]
 gi|306880929|gb|EFN12145.1| Orn/DAP/Arg decarboxylase 2 [Sphingobium chlorophenolicum L-1]
          Length = 390

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 113/373 (30%), Positives = 187/373 (50%), Gaps = 8/373 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P +++D+  +  NL     I   AG+K+L ALK F+ W +   + +Y+DG  +S +Y
Sbjct: 19  VPSPAFVVDEAAVRRNLSVLRDIGDRAGIKVLGALKAFSMWSLGPVIAEYLDGVCASGIY 78

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL-----HK 116
           E  L HE++ GE   Y  AYK  ++  +L   D +IFN+  Q+ + +   ++      + 
Sbjct: 79  EARLAHEEYRGEIATYCAAYKPEDLAEILKISDHVIFNSPGQIARLRPVIEEARLNGVNF 138

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
            IGLRINP  +  +    DP++P SRLG          ++ V+GL  HN CE        
Sbjct: 139 DIGLRINPLHAEGEVPKYDPSQPHSRLGFPIDQLRPEHLEGVDGLHVHNLCEQDFLPLER 198

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
                  +   H    ++W++ GGG H T  DY +      L+    +  +++Y+EPGEA
Sbjct: 199 TWAAIESRVMLHVG-GLKWLNFGGGHHVTRADYQIDLLIAFLQRIKAQTGLELYIEPGEA 257

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT-GPYTAMVCGR 295
           +  +   L   +LD+ +N   + I D S   H+PD +       +           + G 
Sbjct: 258 MALDAGILIGEILDVIDNGMPVAITDISATCHMPDVIEAPYRPAMLHEGLEGQPTRLGGP 317

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-GTIKAI 354
           SCLAGDI G++        G RI+F D A Y++ + N FNG+ +P+I + + +   +K I
Sbjct: 318 SCLAGDIIGDYRVPGGATPGRRIAFLDQAHYSMVKTNTFNGVPLPSIWLWHSETDELKQI 377

Query: 355 REFSYNDYYNNLS 367
           R+FSY D+ + LS
Sbjct: 378 RQFSYEDFKSRLS 390


>gi|108802931|ref|YP_642868.1| diaminopimelate decarboxylase [Rubrobacter xylanophilus DSM 9941]
 gi|108764174|gb|ABG03056.1| diaminopimelate decarboxylase [Rubrobacter xylanophilus DSM 9941]
          Length = 416

 Score =  253 bits (645), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 57/383 (14%), Positives = 106/383 (27%), Gaps = 21/383 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+     L                 +  A+K      +   L     G    S  E
Sbjct: 26  GTPAYVYSYAALERAYREVEEAFSGLDHLVCFAVKANGNLAVLRALASLGAGADIVSGGE 85

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
           +       F  +   +    K  +                +  +L   +  A    K+  
Sbjct: 86  LYRAMRAGFDPKKVVFAGVGKTEQELKAGLGERILMFNVESAGELEHLERLAHLHGKRAR 145

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
             LRINP V              S+ G    + +            ++ G+  H   +  
Sbjct: 146 VALRINPGVDPGTHEHISTGNVESKFGIPADEALSLAERAKGFRCVDLIGVHQHIGSQIV 205

Query: 171 SFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEK 224
               +   ++       E       I ++++GGG+    +D       +    ++     
Sbjct: 206 KVAPYVESVERSAALVDELRSRGFDIRYLNIGGGLGIRYRDEETPSPAELVEAIRPTLAA 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP 283
              +I  E G  I      L T VL    + +   IV D+ +   +   L       +  
Sbjct: 266 SGAKILCEMGRYIAGPAGALLTGVLYRKRSGERSFIVADAGMNDLIRPSLYGAYHEVLPL 325

Query: 284 NTGPY--TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
           + G     A + G  C +GD           + GD ++  +   Y  +  + +N    P 
Sbjct: 326 DEGADQTRADLVGPVCESGDFLARDRDLPDAREGDVLAVMNAGAYGFSMASNYNSRPRPA 385

Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364
             +   D          Y D   
Sbjct: 386 EVLVREDRWAVVREREHYPDLIR 408


>gi|116747509|ref|YP_844196.1| diaminopimelate decarboxylase [Syntrophobacter fumaroxidans MPOB]
 gi|116696573|gb|ABK15761.1| diaminopimelate decarboxylase [Syntrophobacter fumaroxidans MPOB]
          Length = 434

 Score =  253 bits (645), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 58/385 (15%), Positives = 116/385 (30%), Gaps = 22/385 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+     LL++        +        ++K  +   +         G    S  
Sbjct: 35  VGTPCYVYSHATLLHHFTVFDSAFEGVPHLTCFSVKANSNLAVLRLFGSLGGGVDIVSGG 94

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLHK 116
           E+          +   Y+   K  E        N       +  +L     +A       
Sbjct: 95  ELYRARQAGIAPDKIVYSGVGKTLEEIDYALRENILMFNIESTQELEAINARAAAFGCRA 154

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNC-- 167
           +I LR+NP V  +           ++ G +    +++           V G+  H     
Sbjct: 155 RIALRVNPDVDPNTHPYISTGMKKNKFGIEIDSAVKAYERARSLDHVEVVGVDCHIGSQL 214

Query: 168 -ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSE 223
            E   F+     L+ + ++       I+++ LGGG+          +   + + +    +
Sbjct: 215 TEISPFVDALKRLRLLIEKLEAVGITIQYLDLGGGLGIVYDQEAPPEPREYARAILRELK 274

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQES---A 279
                +  EPG  IV N   L   VL          +I D+++   +   L         
Sbjct: 275 GMHCTLIFEPGRVIVGNAGVLLARVLYTKRTQSKSFIITDTAMNDLIRPSLYGSYHQVQP 334

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
               +   +   V G  C +GD   +      V+ GD ++      Y     + +N    
Sbjct: 335 LRRQSRESHIVDVVGPICESGDFIAKDRGLPMVESGDFLAVMSAGAYGFTMSSNYNSRPR 394

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
               +   D      R  +++D   
Sbjct: 395 AAEVLVKDDRYFVIRRRETWDDLIQ 419


>gi|329955138|ref|ZP_08296095.1| carboxynorspermidine decarboxylase [Bacteroides clarus YIT 12056]
 gi|328526137|gb|EGF53156.1| carboxynorspermidine decarboxylase [Bacteroides clarus YIT 12056]
          Length = 393

 Score =  253 bits (645), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 119/373 (31%), Positives = 189/373 (50%), Gaps = 9/373 (2%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+++++ L  NL     +   AGV+++LA K FA W  F    +Y++ +T+SS+YE
Sbjct: 22  PSPCYIMEEELLRKNLTLIKSVADRAGVEIILAFKSFAMWRSFPIFREYVEHSTASSVYE 81

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGL 120
             L  E+FG + H Y+ AY + +   ++     I FN++ Q  +F     A       G+
Sbjct: 82  ARLALEEFGSKAHTYSPAYTEADFSEIMRCSSHITFNSLVQFKRFYPMIQAGGQGISCGI 141

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP  S  +  L +P  P +R G       +   + ++G   H +CE+ S+      L+
Sbjct: 142 RVNPEYSEVETELYNPCAPGTRFGVMAGQLPDVLPQGIDGFHCHCHCESSSYE-LERTLE 200

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVT 239
           ++E +F  +  QI+W++LGGG   T KDY V+   + L+   E+Y    I LEPG A   
Sbjct: 201 HLEAKFSRWFPQIKWLNLGGGHLMTRKDYDVEHLIRLLRGLKERYPHLNIILEPGSAFTW 260

Query: 240 NTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT----GPYTAMVCG 294
            T  L + V+DI EN      + + S   H+PD L       +        G Y   + G
Sbjct: 261 QTGVLTSEVVDIVENRGIRTAILNVSFTCHMPDCLEMPYQPAVRGAETGDGGAYVYRLGG 320

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            SCL+GD  G + F+  + IG+RI FED+  Y   + N FNGI+ P IA+   +G     
Sbjct: 321 NSCLSGDYMGLWSFDHELHIGERIVFEDMIHYTTVKTNMFNGIHHPAIAMWTKEGKADIF 380

Query: 355 REFSYNDYYNNLS 367
           + FSY DY + +S
Sbjct: 381 KLFSYEDYRDRMS 393


>gi|261369009|ref|ZP_05981892.1| carboxynorspermidine decarboxylase [Subdoligranulum variabile DSM
           15176]
 gi|282568883|gb|EFB74418.1| carboxynorspermidine decarboxylase [Subdoligranulum variabile DSM
           15176]
          Length = 402

 Score =  253 bits (645), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 118/378 (31%), Positives = 186/378 (49%), Gaps = 14/378 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP YL+D+  L  N      +    G K+LLA K F+ + ++  L   + GT +S L+
Sbjct: 24  LPTPCYLLDEGALARNGQILGDLAARTGCKVLLAQKAFSNYDLYPVLAPCLAGTEASGLF 83

Query: 62  EVMLGHEKFGG-ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           E  LG E+  G E H +  AY++ E+  +L   D I+FN+ +QL KF   A+   K +GL
Sbjct: 84  EARLGAEEMPGKEVHVFCAAYREDEMAELLRWADHIVFNSPAQLAKFGPMAKAAGKSVGL 143

Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSFL 173
           R+NP  S      + DP  P SRLG        +  ++      ++GL FH  CE     
Sbjct: 144 RVNPECSTQEGHAIYDPCAPGSRLGTTRAQWDAAVAEHPALPDLLDGLHFHTLCEQD-AD 202

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
             +  L  +  +F   + +++W+++GGG H T   Y V    + +      + V +YLEP
Sbjct: 203 ALAVTLDAVAAKFRDLLPRMQWLNMGGGHHITRPGYDVATLEKCIARAQADWGVTVYLEP 262

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPN----TGPY 288
           GEA   N     T VLD+  N    V + D+S   H+PD +       +  +      P 
Sbjct: 263 GEACALNAGYFLTRVLDVVHNGDTTVAILDASAACHMPDVIEMPYRPPLLGSADAGEKPC 322

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348
           T  + G +CLAGD+ G++ F+   + GD + F D+A Y   + N FNG+ +P I  +  D
Sbjct: 323 TVRLAGPTCLAGDVIGDYSFDAEPQPGDLLVFGDMAIYTTCKNNTFNGMPLPAIWTRGAD 382

Query: 349 GTIKAIREFSYNDYYNNL 366
           GT + + +F Y D+   L
Sbjct: 383 GTCRELVQFGYRDFKVRL 400


>gi|212692988|ref|ZP_03301116.1| hypothetical protein BACDOR_02489 [Bacteroides dorei DSM 17855]
 gi|237725614|ref|ZP_04556095.1| carboxynorspermidine decarboxylase [Bacteroides sp. D4]
 gi|212664457|gb|EEB25029.1| hypothetical protein BACDOR_02489 [Bacteroides dorei DSM 17855]
 gi|229436301|gb|EEO46378.1| carboxynorspermidine decarboxylase [Bacteroides dorei 5_1_36/D4]
          Length = 387

 Score =  253 bits (645), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 124/382 (32%), Positives = 192/382 (50%), Gaps = 17/382 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P Y++D+  L  NL     +   AGV+++LA K FA W  F    +Y+  TT+SS+Y
Sbjct: 7   VPSPCYVMDEALLRKNLSLIKSVADRAGVEIILAFKSFAMWKSFPVFREYIRYTTASSVY 66

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHKKIG 119
           E  L +E+FG + H Y+ AY D +   ++     I FN+ SQ  +F    KA       G
Sbjct: 67  EARLAYEEFGSKAHTYSPAYTDTDFPVIMQCSSHITFNSFSQFRRFYSMVKASGEKISCG 126

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +RINP  S  +  L +P  P +R G       E+  + + G   H +CE+ S+      L
Sbjct: 127 IRINPEYSEVEVELYNPCAPGTRFGVTADLLPETLPEGIEGFHCHCHCESSSYE-LEHTL 185

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238
           ++IE+ F  +  QI+W++LGGG   T KDY  +     LK    +Y   +I LEPG A  
Sbjct: 186 QHIEETFARWFPQIKWLNLGGGHLMTRKDYDTEHLISLLKGLKARYPHLEIILEPGSAFT 245

Query: 239 TNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTG----------- 286
             T  L  +V+DI EN      + D S   H+PD L       +                
Sbjct: 246 WQTGPLVASVVDIVENRGIKTAILDVSFTCHMPDCLEMPYQPAVRGAEALPVDAIKTALT 305

Query: 287 -PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
                 + G SCL+GD  G + F+ P+++G+RI  ED+  Y + + N FNGI+ P+IA+ 
Sbjct: 306 EENIYRLGGNSCLSGDYMGSWRFDHPLQVGERIVLEDMIHYTMVKTNMFNGIHHPSIAIW 365

Query: 346 NVDGTIKAIREFSYNDYYNNLS 367
           + D T++  ++F Y DY + +S
Sbjct: 366 HTDNTLEVYKDFRYEDYRDRMS 387


>gi|110835189|ref|YP_694048.1| diaminopimelate decarboxylase [Alcanivorax borkumensis SK2]
 gi|110648300|emb|CAL17776.1| diaminopimelate decarboxylase [Alcanivorax borkumensis SK2]
          Length = 413

 Score =  252 bits (644), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 63/380 (16%), Positives = 123/380 (32%), Gaps = 22/380 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP YL  +  L  +         +   ++  A+K  +   + + L +   G    S  E
Sbjct: 26  GTPLYLYSRAALERHYLAFDEAFGDHPHQVCYAVKANSNLAVLNVLARVGAGFDIVSGGE 85

Query: 63  VMLG-HEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +          +   ++   K       A+ +N       + ++L      A +L +   
Sbjct: 86  LERVLRAGGDPDKIVFSGVGKTANEMAAALKANIHCFNVESAAELELLNLVAGELDREAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCENK 170
           I +R+NP V              ++ G          +   E     + G+  H   +  
Sbjct: 146 IAIRVNPDVDAQTHPYISTGLKDNKFGVDITKAPALYQRAAELPHIKILGIDCHIGSQLT 205

Query: 171 SFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
               F A L+ + K          +I  + LGGG+  T  D    D    ++   +    
Sbjct: 206 KLDPFEAALERVLKLLAQLQEHGIEIHHLDLGGGLGVTYDDETPPDRSDYVQALLKHIPG 265

Query: 228 --QIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIYPN 284
              +++EPG +I  N     T VL +         IVD ++   +   L       +   
Sbjct: 266 ELPVHIEPGRSIAANAGIFVTQVLFLKPTEHKNFAIVDGAMNDLIRPSLYSAWQNIVPVK 325

Query: 285 TGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                     + G  C  GD  G+      ++ GD ++      Y     + +N  N P 
Sbjct: 326 PHEADCRNWDIVGPVCETGDFLGKDRALA-LETGDLLAVRSAGAYGFAMASNYNSRNRPA 384

Query: 342 IAVKNVDGTIKAIREFSYND 361
             + + D      +  +Y++
Sbjct: 385 EVMVDGDQAFVVRQRETYDE 404


>gi|313682087|ref|YP_004059825.1| carboxynorspermidine decarboxylase [Sulfuricurvum kujiense DSM
           16994]
 gi|313154947|gb|ADR33625.1| carboxynorspermidine decarboxylase [Sulfuricurvum kujiense DSM
           16994]
          Length = 381

 Score =  252 bits (644), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 132/371 (35%), Positives = 207/371 (55%), Gaps = 8/371 (2%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP Y+ ++  L  NL     +++ +G K++LALK FA W  F  + +Y+ G T+S L+E 
Sbjct: 12  TPCYICEEALLEKNLQVMERVQRESGAKIILALKGFAMWSTFPLVAKYLHGCTASGLHEA 71

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKIGLR 121
            L  EK   E H Y+ A+KD +ID +    D I+FN+ +Q +++ D+      +  + LR
Sbjct: 72  KLAREKMNKEVHTYSPAFKDEDIDEIARISDDIVFNSPAQFHRYYDRVKSINPNISVSLR 131

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP  S S   L +P   +SRLG    +  ES +  ++GL FH  CE         +L+ 
Sbjct: 132 VNPEYSSSPVDLYNPCGVYSRLGTTLANFDESIVGKLDGLNFHALCEQN-VDALEGVLEA 190

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240
            E +FG FI  +++++ GGG H T  DY V+     ++ F  +++   +YLEPGEA+   
Sbjct: 191 FEAKFGPFIDGLKYVNFGGGHHITRVDYDVERLIDVIRAFKARHNDITVYLEPGEAVGWQ 250

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----TGPYTAMVCGRS 296
           T  L  +VLDI  N  ++ I+D+S EAH+PD L     A +  +       +T    G +
Sbjct: 251 TGPLVASVLDIVRNGMDIAILDTSAEAHMPDTLAMPYRAMVRGSGEAGEKAHTYRFGGNT 310

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CLAGDI G++ F++P+K+GD+I FED   Y   +   FNGI +P++A+   +G +K +  
Sbjct: 311 CLAGDIMGDYSFDEPLKVGDKIIFEDQIHYTFVKNTTFNGIKLPSLAIWTKEGELKMVHA 370

Query: 357 FSYNDYYNNLS 367
           F Y DY N LS
Sbjct: 371 FGYEDYRNRLS 381


>gi|30249905|ref|NP_841975.1| Orn/DAP/Arg decarboxylase family protein [Nitrosomonas europaea
           ATCC 19718]
 gi|30180942|emb|CAD85868.1| Orn/DAP/Arg decarboxylases family 2 [Nitrosomonas europaea ATCC
           19718]
          Length = 417

 Score =  252 bits (643), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 58/384 (15%), Positives = 113/384 (29%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+     +        +        +  A+K  +   + + L +   G    S  E
Sbjct: 29  GTPCYVYSSAAIRTTYQIFDHAFGQRDHLICYAVKANSNLAILNLLARLGSGFDIVSGGE 88

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +          +   ++      +    A+ +N       +  +L    + A ++ K   
Sbjct: 89  LQRVLKAGGDPQKTVFSGVGKTPEEIRAALAANILCFNVESEMELMVLNEIAGQMGKIAP 148

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           + LR+NP V  +           ++ G    +               V+GL  H   +  
Sbjct: 149 VSLRVNPDVDANTHPYISTGMKENKFGIPAAEAGRIYSLAHQLPHIQVSGLDCHIGSQLT 208

Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS---EK 224
               F      +             I+ + LGGG+               +K      E 
Sbjct: 209 EIAPFIEAADKMLDLLARLQTMGVTIKHLDLGGGLGIRYDRESPPSIEAYIKALCTIAEN 268

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
           +  Q+ +EPG ++V N   L T V  +         +  +    +    LYQ   +I P 
Sbjct: 269 HPQQLLIEPGRSMVGNAGLLLTRVHYLKHTSHRNFAIVDAAMNDMLRPALYQAYHSILPV 328

Query: 285 TGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
           T       T  + G  C  GD  G       +   D ++      Y ++  + +N     
Sbjct: 329 TKRTGETKTYQIVGPVCETGDFLGHDRNLA-LTKNDLLAVMSAGAYGMSMSSNYNTRPRA 387

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + +           +  D Y 
Sbjct: 388 AEVMVDGSTVHLIRARETVEDLYA 411


>gi|242279430|ref|YP_002991559.1| diaminopimelate decarboxylase [Desulfovibrio salexigens DSM 2638]
 gi|242122324|gb|ACS80020.1| diaminopimelate decarboxylase [Desulfovibrio salexigens DSM 2638]
          Length = 412

 Score =  252 bits (643), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 71/387 (18%), Positives = 124/387 (32%), Gaps = 22/387 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+     L  + +               ++K  +   +   L +   G    S  E
Sbjct: 26  GTPLYIYSAATLRRHFEAFDSAFTGLDHMTCYSVKANSNLSVLKLLAEMGAGMDIVSGGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++   K     A     D       +V ++++  + A+ ++K   
Sbjct: 86  LFRALKAGVPASKIVFSGVGKKAYEIAEALKADILMFNVESVGEMHRINEVAESMNKTAR 145

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCENK 170
           +  RINP V              ++ G   +   E+             G+  H   +  
Sbjct: 146 ISFRINPDVDPKTHPYISTGMKKNKFGLDMETAKEAYKTAKELSNVSPIGMDCHIGSQLT 205

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
           +   F   L        E G    +IE + LGGG+  T  +        F + L +    
Sbjct: 206 TIEPFLEALDKLLAFRDELGAMGIEIEHLDLGGGLGITYDEEEPPHPKEFGEALSKALAD 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLL--YQESATI 281
             +++ LEPG  I  N   L   V+   +       IVD+++   V   L   Y   A +
Sbjct: 266 KGLKVILEPGRVIAGNAGILVGEVIYTKKTPTKDFLIVDAAMNDLVRPSLYQSYHRIAEV 325

Query: 282 YPNTGPY-TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
             N  P     V G  C +GD   +      +K G+ I+      Y     + +N     
Sbjct: 326 TQNNRPEIDYDVVGPICESGDFLAKDRMLPEMKQGELIAVFSAGAYGFTMSSNYNSRLRA 385

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNNLS 367
              + + D  I A R  +Y D     S
Sbjct: 386 AEIIVDGDDVIMARRRETYEDLLRLES 412


>gi|52548561|gb|AAU82410.1| diaminopimelate decarboxylase [uncultured archaeon GZfos17C7]
          Length = 425

 Score =  252 bits (643), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 71/395 (17%), Positives = 130/395 (32%), Gaps = 32/395 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D+ KL NN  +     +   +   +  A+K      +   L     G    S 
Sbjct: 23  GTPLYVTDENKLRNNFKSYKNAFETTNIDTDIYYAVKANGNLALLKILASEGAGADVFSA 82

Query: 61  YEVMLG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
            E+ L        E   +N     D ++   + +   +  ++V +L      A +L    
Sbjct: 83  GELELTKLAGIPAEKILFNGNSKSDDDLKEAVESGVRVSVDSVDELRALSAVANELGREV 142

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCEN 169
           +I +R+NP VS             S+ G         C++  +     + GL  H   + 
Sbjct: 143 EIAIRVNPDVSPDVHAKIATGLKESKFGIPFHDVIPVCEEAEKLPNVLLAGLHCHIGSQI 202

Query: 170 KSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDY------PVKDFCQRLKE 220
                F    + +            +++++ LGGG+    +          +D  + +  
Sbjct: 203 LDISVFGEATEKMMALVERMYERGMKLKFVDLGGGLGIGYRQEEKATAPTPEDLAEMILP 262

Query: 221 FSEKYSVQI------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLL 274
             E     +       LEPG +IV  +T L + V  +    KN V +D+     +   + 
Sbjct: 263 LFENKIRDLGISLKLVLEPGRSIVGASTILLSRVNAVKRANKNFVAIDAGFNLLIRPVMY 322

Query: 275 YQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                 +  N           V G  C +GDI  +      V+ GD ++  D   Y  + 
Sbjct: 323 GAYHEVVVANKVNERASELYTVVGNVCESGDIMAKDRMLPKVERGDLVAILDTGAYGFSM 382

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            + +NG       +             S  D   N
Sbjct: 383 SSQYNGRPRCAEVLVCNGKADLIRSRESIEDLIRN 417


>gi|262381916|ref|ZP_06075054.1| carboxynorspermidine decarboxylase [Bacteroides sp. 2_1_33B]
 gi|262297093|gb|EEY85023.1| carboxynorspermidine decarboxylase [Bacteroides sp. 2_1_33B]
          Length = 379

 Score =  252 bits (643), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 131/373 (35%), Positives = 198/373 (53%), Gaps = 9/373 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I +P Y++++  L NNL     +++ AGV ++LA K FA W  F  + +Y+  +T+SS +
Sbjct: 7   IPSPCYVMEENLLRNNLSLIKSVKERAGVNIILAFKAFALWKAFPIVREYIPFSTASSKF 66

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIG 119
           E  L  E+ G   H Y+ AY + +   +L     + FN++SQ ++F     A       G
Sbjct: 67  EAQLAFEEMGSPAHTYSPAYTEADFPLILRYSSHVTFNSLSQFHRFYPMVRADGNRVSCG 126

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           LRINP  S  +  L +P  P SR+G       ++  + + GL FH  CE+ S+      L
Sbjct: 127 LRINPEYSDVETDLYNPCAPGSRMGVTGDLLGDTLPEGIEGLHFHTLCESTSYD-LERTL 185

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238
             +E+ FG F+  ++W+++GGG   T KDY V+     LK F E+Y   ++ +EPG A  
Sbjct: 186 AEVERRFGRFLPHVKWLNMGGGHLMTRKDYDVEHLIALLKGFKERYPNLELIMEPGSAFA 245

Query: 239 TNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVC 293
             T  L TTV+DI EN      I+D+S   H+PD L       I        G  T  + 
Sbjct: 246 WQTGFLLTTVVDIVENHGIKTAIIDASFTCHMPDCLEMPYKPAIRFATDAVEGKPTYRIG 305

Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353
           G SCL+GD  G++ F+KP+ IGD++ FED+  Y I + N FNGI  P++A+ N D  +  
Sbjct: 306 GNSCLSGDYMGDWSFDKPLAIGDKLIFEDMIHYTIVKTNMFNGIPHPSLALWNKDDQLVV 365

Query: 354 IREFSYNDYYNNL 366
            R F Y DY N +
Sbjct: 366 YRTFGYEDYKNRM 378


>gi|237752091|ref|ZP_04582571.1| diaminopimelate decarboxylase dap decarboxylase [Helicobacter
           winghamensis ATCC BAA-430]
 gi|229376658|gb|EEO26749.1| diaminopimelate decarboxylase dap decarboxylase [Helicobacter
           winghamensis ATCC BAA-430]
          Length = 415

 Score =  252 bits (643), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 68/383 (17%), Positives = 120/383 (31%), Gaps = 21/383 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D +++    +            +  ALK  +   +   L     G    SL E
Sbjct: 27  GTPLYVYDLERIEARFNALKQAFAGRKALVCYALKANSNLSVIKKLASLESGADCVSLGE 86

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK----LHKK 117
           +              Y+   K         +   +  N  S+    + +A      +  +
Sbjct: 87  IKRAVMAGIPKYKIIYSGVGKQDFEIKEAISLGILFINVESKEEMLRVEACARELGISAR 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170
           I +R+NP +              ++ G   ++          +E     G+ FH   +  
Sbjct: 147 ISIRVNPDIDPQTHPYISTGLKENKFGVSIEEAKGMYLHAHNAEFLEPIGIHFHIGSQLT 206

Query: 171 SFLCFSAMLKNIEKEFGHFI---TQIEWISLGGGIHFTDKDYP---VKDFCQRLKEFSEK 224
                +   + I +     +     I++  +GGGI  T  D       D+ Q +      
Sbjct: 207 KLKPIAESAQKIAQLTQSLLALKIDIKFFDIGGGIGITYSDESTISPYDYAQAILAELRG 266

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLL--YQESATI 281
             V I  EPG  IV N+    T VL       K  VIVD ++   +   L   Y +   +
Sbjct: 267 LDVTIVCEPGRFIVGNSGVFLTKVLYQKENQGKRFVIVDGAMNDLIRPSLYAAYHQILAL 326

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                   A V G  C +GD  G+       + GD ++      Y  +  + +N      
Sbjct: 327 KNMESKGEAEVAGPICESGDYLGKNIVLPHCERGDILAVLSAGAYGFSMASNYNTRPRCA 386

Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364
             V          +  S+ D   
Sbjct: 387 EVVVENGKIRLVRKRESFEDLIA 409


>gi|326387667|ref|ZP_08209273.1| Orn/DAP/Arg decarboxylase 2 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326207713|gb|EGD58524.1| Orn/DAP/Arg decarboxylase 2 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 393

 Score =  252 bits (643), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 120/376 (31%), Positives = 186/376 (49%), Gaps = 11/376 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P +++D   L  NL     IR  AG+KLL ALK F+ W +   +  Y+DG  +S L+
Sbjct: 19  VDSPAFVVDAAALRRNLGVLADIRDRAGIKLLSALKAFSMWKVAPLVGDYLDGVCTSGLW 78

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-----AQKLHK 116
           E  L  E + GE   Y   YK  ++  +    D +IFN+  Q+ +F D      A+    
Sbjct: 79  EAKLADEHYSGEIATYCAGYKAQDLPEICELSDHVIFNSPGQIARFADVLATARARGCSF 138

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
            +GLRINP  +  +    DP  P SRLG       ++ ++ V G+ FH  CE   F   +
Sbjct: 139 DVGLRINPLHAEGEVPRYDPCAPHSRLGFPISQLTQAHLEGVKGIHFHTLCEQD-FEPLA 197

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
                +++    +  Q+EW++ GGG H T  DY   +  + LK    +   +IYLEPGEA
Sbjct: 198 RTWDAVKERLKPYFGQLEWLNFGGGHHITRADYQRDELVEFLKSVKAETGCEIYLEPGEA 257

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT----AMV 292
           +  +   L  TVLD  EN   + I D S   H+PD L       +    G  +      +
Sbjct: 258 VALDAGILVGTVLDRHENGMPIAITDISATCHMPDVLEAPYRPAMLGEWGEGSGETAVRL 317

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTI 351
            G SCLAGD+ G++    P + G R +F D A Y++ +   FNG+ +P+I + +     +
Sbjct: 318 GGPSCLAGDVIGDYRLPVPCEPGVRFAFLDQAHYSMVKTTTFNGVPLPSIWLWDSESDVL 377

Query: 352 KAIREFSYNDYYNNLS 367
           + +R FSY D+ + LS
Sbjct: 378 ECVRSFSYEDFRDRLS 393


>gi|70733296|ref|YP_263070.1| diaminopimelate decarboxylase [Pseudomonas fluorescens Pf-5]
 gi|68347595|gb|AAY95201.1| diaminopimelate decarboxylase [Pseudomonas fluorescens Pf-5]
          Length = 415

 Score =  251 bits (642), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 62/384 (16%), Positives = 119/384 (30%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +                 +  A+K  +  G+ + L +   G    S  E
Sbjct: 26  GTPTYVYSRAHIEAQYQAYAQALAGMPHLVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85

Query: 63  VMLGHEKFG-GETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G  +   ++     +D    A+          +  +L + +  A +L     
Sbjct: 86  LERVLAAGGQADKIVFSGVGKTRDDMRRALEVGVHCFNVESAEELERLQLVAAELGVRAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G              +     + G+  H   +  
Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIDIATAEDVYIRAAQLPNLEIVGVDCHIGSQLT 205

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
           +   F   L    ++    G     +  I LGGG+    +D         +K   E+   
Sbjct: 206 TLEPFIDALDRLLDLVDRLGECGIYLRHIDLGGGLGVRYRDEEPPLAADYVKAVRERLDG 265

Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280
           +   +  EPG  IV N   L T V  +         IVD ++   +   L        A 
Sbjct: 266 RDLALVFEPGRFIVANAGVLLTRVEYLKHTEHKDFAIVDGAMNDLIRPALYQAWMDVSAV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              +T P T  + G  C  GD   +      +  GD ++      Y     + +N     
Sbjct: 326 RPRDTEPRTYDIVGPICETGDFLAKERTLA-LAEGDLLAVHSAGAYGFVMSSNYNTRGRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + + D  ++  R  +  + + 
Sbjct: 385 AEVLVDGDQAVEVRRRETVAELFA 408


>gi|254420585|ref|ZP_05034309.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein
           [Brevundimonas sp. BAL3]
 gi|196186762|gb|EDX81738.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein
           [Brevundimonas sp. BAL3]
          Length = 392

 Score =  251 bits (642), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 124/373 (33%), Positives = 189/373 (50%), Gaps = 8/373 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P +++D+  +  NL     +      ++LLALK F+ W + D + +Y+DG  +S L+
Sbjct: 21  VPSPAFVVDEVAVRRNLSVLQDVGTRGNARVLLALKAFSMWSLADVVGEYLDGVCASGLW 80

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-----AQKLHK 116
           E  L  E + G    Y+ AYK  ++  +L   DT+IFN   Q+ +F D      A     
Sbjct: 81  EARLAREFYHGHLTTYSPAYKPADLPEILRLSDTVIFNAPDQIARFADLIAAARAGGETF 140

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
            IGLR+NP  S  +    DP +  SRLG          ++ V+GL  H  CE   F    
Sbjct: 141 DIGLRLNPEHSEGQVAKYDPCQLGSRLGFPVSQLTPEHLQGVDGLHIHALCEQG-FEPLK 199

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
            +   +E +    +  ++WI+LGGG H T  DY +      LK+  E+Y +Q+Y+EPGEA
Sbjct: 200 RIWAAVEPKLTPLLPDLKWINLGGGHHVTRADYRIDALVGFLKDLGERYGLQVYIEPGEA 259

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN-TGPYTAMVCGR 295
           I  +   L   VLD   N   + I D S   H+PD +       +     G  T  + G 
Sbjct: 260 IALDAGILVGEVLDTFHNGLPIAITDISATCHMPDVIEAPYRPAMLNEAEGGVTYRLGGP 319

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-GTIKAI 354
           SCLAGDI G++ F      G RI+F D A Y++ + N FNG+ +P IA+ N D   +K +
Sbjct: 320 SCLAGDIIGDYGFTTAPTAGTRIAFLDQAHYSMVKTNTFNGVPLPAIALWNSDTDALKLV 379

Query: 355 REFSYNDYYNNLS 367
           REF Y+++ + LS
Sbjct: 380 REFDYSEFRDRLS 392


>gi|198275888|ref|ZP_03208419.1| hypothetical protein BACPLE_02063 [Bacteroides plebeius DSM 17135]
 gi|198271517|gb|EDY95787.1| hypothetical protein BACPLE_02063 [Bacteroides plebeius DSM 17135]
          Length = 388

 Score =  251 bits (642), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 120/381 (31%), Positives = 188/381 (49%), Gaps = 17/381 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I +P Y++++  L  NL    ++   AGV+++LA K FA W  F    +Y+  TT+SS Y
Sbjct: 8   IPSPCYVMEEDLLRKNLTLIKHVADTAGVEIILAFKAFAMWKSFPIFREYIRYTTASSEY 67

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKIG 119
           E  L  E+FG + H Y+ AY      A L     I FN++SQ  +F   A     H   G
Sbjct: 68  EARLAFEEFGSKAHTYSPAYTAQNFPAFLKYSSHITFNSLSQFERFYPLAKAYPEHVSCG 127

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +R+NP  S  +  L +P  P +R G       +   + + G   H +CE+ S+      L
Sbjct: 128 IRVNPEYSEVEVELYNPCAPGTRFGVTADLLPKQLPEGIEGFHCHCHCESSSYE-LERTL 186

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238
           ++IE++F  +  Q++W++LGGG   T  DY V      L+    +Y   QI LEPG A  
Sbjct: 187 QHIEEKFSRWFPQLKWLNLGGGHLMTRADYDVDHLIGLLQGLKSRYPHLQIILEPGSAFT 246

Query: 239 TNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT------------ 285
             T  L  +V+D+ E+      + D S   H+PD L       +                
Sbjct: 247 WQTGPLVASVVDVVESRGIRTAILDVSFTCHMPDCLEMPYQPRVRNAESLPAEAVKTAAR 306

Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
             +   + G SCL+GD  G + F+  +++G+RI FED+  Y + + N FNGI+ P+IA+ 
Sbjct: 307 EEHVYRLGGNSCLSGDYMGSWKFDHELQVGERIVFEDMIHYTMVKTNMFNGIHHPSIALL 366

Query: 346 NVDGTIKAIREFSYNDYYNNL 366
           + DG ++  R F Y DY + +
Sbjct: 367 HADGELEVYRTFHYEDYRDRM 387


>gi|94497589|ref|ZP_01304158.1| Orn/DAP/Arg decarboxylase 2 [Sphingomonas sp. SKA58]
 gi|94423006|gb|EAT08038.1| Orn/DAP/Arg decarboxylase 2 [Sphingomonas sp. SKA58]
          Length = 390

 Score =  251 bits (642), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 117/373 (31%), Positives = 185/373 (49%), Gaps = 8/373 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P +++D+  +  NL     I   AG+K+L ALK F+ W +   + +Y+DG  +S +Y
Sbjct: 19  VPSPAFVVDETAIRRNLSILRDIGDRAGIKVLGALKAFSMWSLGPVIGEYLDGVCASGIY 78

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL-----HK 116
           E  LG E++ GE   Y  AYK  ++  +L   D +IFN+  Q+ + K           + 
Sbjct: 79  EARLGREEYRGEVATYCAAYKPDDLAEILRISDHVIFNSPGQIARLKPVIDAARKDGVNF 138

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
            IGLR+NP  +  +    DP++P SRLG          ++ V+GL  HN CE        
Sbjct: 139 DIGLRLNPLHAEGEVPKYDPSQPHSRLGFPVDQLRPEHLEGVDGLHIHNLCEQDFLPLQR 198

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
                IE      +  ++W++ GGG H T  DY + D    L+    +  + +Y+EPGEA
Sbjct: 199 TWTA-IESRVMPHVANLKWLNFGGGHHVTRADYQIDDLVAFLQTIKAQTGLDLYIEPGEA 257

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA-MVCGR 295
           +  +   L   +LD+ +N   + I D S   H+PD +       +           + G 
Sbjct: 258 MALDAGILVGEILDVIDNGMPVAITDISATCHMPDVIEAPYRPAMLHEDSNGPVTRLGGP 317

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-GTIKAI 354
           SCLAGDI G++      + G RI+F D A Y++ + N FNG+ +P+I + N D   +K I
Sbjct: 318 SCLAGDIIGDYRVPGGAEPGARIAFLDQAHYSMVKTNTFNGVPLPSIWLWNSDTDELKEI 377

Query: 355 REFSYNDYYNNLS 367
           R FSY D+   LS
Sbjct: 378 RSFSYADFKARLS 390


>gi|77461719|ref|YP_351226.1| diaminopimelate decarboxylase [Pseudomonas fluorescens Pf0-1]
 gi|77385722|gb|ABA77235.1| diaminopimelate decarboxylase [Pseudomonas fluorescens Pf0-1]
          Length = 415

 Score =  251 bits (642), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 64/384 (16%), Positives = 116/384 (30%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +                 +  A+K  +  G+ + L +   G    S  E
Sbjct: 26  GTPTYVYSRAHIEAQYLAYADALAGMPHLVCFAVKANSNLGVLNVLARIGAGFDIVSRGE 85

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +          +   ++     +D    A+          +  +L + +  A +L     
Sbjct: 86  LERVLAAGGSPDKIVFSGVGKTRDDMRRALEVGVHCFNVESTDELERLQVVAAELGVRAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G    D               V G+  H   +  
Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIADAEDVYVRAAHLPNLEVVGVDCHIGSQLT 205

Query: 171 ---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--- 224
               FL     L ++    G     +  I LGGG+    +D         +K   E+   
Sbjct: 206 TLPPFLDALDRLLDLVDRLGDCGIHLRHIDLGGGLGVRYRDEEPPLAADYIKAVRERLVG 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280
             + +  EPG  IV N   L T V  +         IVD+++   +   L          
Sbjct: 266 RDLALVFEPGRFIVANAGVLLTQVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVTPV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
               T   T  V G  C  GD   +      ++ GD ++      Y     + +N     
Sbjct: 326 KPRETAARTYDVVGPICETGDFLAKERELA-LEEGDLLAVHSAGAYGFVMSSNYNTRGRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + + D   +  R  +  + + 
Sbjct: 385 AEVLVDGDQAFEVRRRETVAELFA 408


>gi|332885338|gb|EGK05589.1| carboxynorspermidine decarboxylase [Dysgonomonas mossii DSM 22836]
          Length = 393

 Score =  251 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 126/375 (33%), Positives = 192/375 (51%), Gaps = 10/375 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P ++++++ L NNL     ++  AGV ++LA K +A W  F  + +Y+  +T+SS+Y
Sbjct: 20  VPSPCFVMEEELLRNNLSLIKSVKDRAGVNIILAFKAYAMWKSFPIIREYIPCSTASSVY 79

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIG 119
           E  L +E+ G   H +  AY        +     I FN++SQ ++F             G
Sbjct: 80  EAQLAYEEMGSLAHTFTPAYTSENFPLFMRYSSHITFNSLSQFDRFYPETLKHSHKVSCG 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           LRINP  S  +  L +P  P SRLG       +   + + GL FH  CE+ S+      L
Sbjct: 140 LRINPEYSTVETDLYNPATPGSRLGVSLDQLGDKLPEGLEGLHFHTLCESSSYD-LEKTL 198

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238
           + IE++FGH ++Q++W ++GGG   T KDY V+     L+ F  K+   +I +EPG A  
Sbjct: 199 EVIEQKFGHLLSQVKWFNMGGGHLMTRKDYDVEHLIGLLQSFKAKHPNLEIIMEPGSAFA 258

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVE-AHVPDYLLYQESATIYPNTGPY-----TAMV 292
             T  L +TV+DI EN      +       H+PD L       I            T  +
Sbjct: 259 WQTGVLVSTVVDIVENRGIKTAILDVSFACHMPDCLEMPYKPHIRGAYHEPVQGLPTYRM 318

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352
            G SCL+GD  GE+ F++P+ IGD+I FED+  Y I +   FNGI+ P IA+ N    ++
Sbjct: 319 GGSSCLSGDFVGEWSFDEPLLIGDKIIFEDMIHYTIVKTTMFNGISHPAIALWNKSNQLE 378

Query: 353 AIREFSYNDYYNNLS 367
             REFSY DY   +S
Sbjct: 379 IYREFSYEDYKTRMS 393


>gi|52549770|gb|AAU83619.1| diaminopimelate decarboxylase [uncultured archaeon GZfos32E4]
          Length = 425

 Score =  251 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 71/395 (17%), Positives = 130/395 (32%), Gaps = 32/395 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D+ KL NN  +     +   +   +  A+K      +   L     G    S 
Sbjct: 23  GTPLYVTDENKLRNNFKSYKNAFETTNIDTDIYYAVKANGNLALLKILASEGAGADVFSA 82

Query: 61  YEVMLG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
            E+ L        E   +N     D ++   + +   +  ++V +L      A +L    
Sbjct: 83  GELELTKLAGIPAEKILFNGNSKSDDDLKEAVESGVRVSVDSVDELRALSAVANELGREV 142

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCEN 169
           +I +R+NP VS             S+ G         C++  +     + GL  H   + 
Sbjct: 143 EIAIRVNPDVSPDVHAKIATGLKESKFGIPFHDVIPVCEEAEKLPNVLLAGLHCHIGSQI 202

Query: 170 KSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDY------PVKDFCQRLKE 220
                F    + +            +++++ LGGG+    +          +D  + +  
Sbjct: 203 LDISVFGEATEKMMALVERMYERGMKLKFVDLGGGLGIGYRQEEKATAPTPEDLAEMILP 262

Query: 221 FSEKYSVQI------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLL 274
             E     +       LEPG +IV  +T L + V  +    KN V +D+     +   + 
Sbjct: 263 LFENKIRDLGISLKLVLEPGRSIVGASTILLSRVNAVKRANKNFVAIDAGFNLLIRPVMY 322

Query: 275 YQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                 +  N           V G  C +GDI  +      V+ GD ++  D   Y  + 
Sbjct: 323 DAYHEVVVANKVNERASELYTVVGNVCESGDIMAKDRMLPKVERGDLVAILDTGAYGFSM 382

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            + +NG       +             S  D   N
Sbjct: 383 SSQYNGRPRCAEVLVCNGKADLIRSRESIEDLIRN 417


>gi|304315452|ref|YP_003850599.1| diaminopimelate decarboxylase [Methanothermobacter marburgensis
           str. Marburg]
 gi|302588911|gb|ADL59286.1| diaminopimelate decarboxylase [Methanothermobacter marburgensis
           str. Marburg]
          Length = 428

 Score =  251 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 66/391 (16%), Positives = 129/391 (32%), Gaps = 30/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ID+ ++  N            +  ++  A K      +   L +   G  + S 
Sbjct: 28  GTPLYVIDEMRIRENYRRLHRAFSRNYSDFQVFYACKANTNLAVMRILEEEGSGIDAVSP 87

Query: 61  YEVMLGH-EKFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E+ +     F  E   Y     +D E+   L     I  ++ SQL +  + A +   ++
Sbjct: 88  GEIYIALMAGFDPERILYTGNNVRDDELQFALEAGVRINIDSRSQLLRLAEMAPE-GLEV 146

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSF 172
             R+NP V              S+ G    +  E     ++      G+  H        
Sbjct: 147 SFRVNPLVGAGHHEHCITGGEMSKFGIMESEAPEVYSLALDLGLKPVGIHAHIGSGILDP 206

Query: 173 LCFSAMLKNIEKE----FGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK 224
             F   ++++        G    + E+I  GGG+        +   + +F  R+    + 
Sbjct: 207 EPFMLAVESLMDIAGRVHGETGIEFEFIDFGGGLGIPYTPDEEPLDIDEFASRITGLFKD 266

Query: 225 Y-------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
                      + LEPG  IV + + L T V  + E+ +    VD+     +   +    
Sbjct: 267 KLSDYGLGRPVMCLEPGRYIVGDASYLLTRVNTVKESYRKFAGVDAGFNTLLRPAMYGSY 326

Query: 278 SATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
              +  +           + G  C +GD+F        V  GD ++  +   Y+ +  + 
Sbjct: 327 HHILVADRPLAGPSGKIDIAGNVCESGDLFARDRPMSEVNEGDILAIMNAGAYSFSMASQ 386

Query: 334 FNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +N    P   +          R  ++ D   
Sbjct: 387 YNSRPRPAEVLVRDGDAEVVRRRETFADLLA 417


>gi|258405461|ref|YP_003198203.1| diaminopimelate decarboxylase [Desulfohalobium retbaense DSM 5692]
 gi|257797688|gb|ACV68625.1| diaminopimelate decarboxylase [Desulfohalobium retbaense DSM 5692]
          Length = 418

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 65/384 (16%), Positives = 115/384 (29%), Gaps = 22/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+     L  +        +        + K  +   +   L     G    S  E
Sbjct: 26  GTPLYIYSTATLRRHYHAFDSAFEGLDHLTCFSAKANSNLSVLRLLGDMGAGVDIVSGGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQK--LHKK 117
           +          E   Y+   K           D       +V +L    + AQ+  L  +
Sbjct: 86  LYRALKAGIAPEKIVYSGVGKQRHEIEQALEADILMFNCESVPELELINEVAQEKGLVAR 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170
           I LRINP V              ++ G   +          +    +  G+  H   +  
Sbjct: 146 ISLRINPDVDPQTHPYISTGLKKNKFGLNLEQSEEAYRLARDLPGVDPIGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDF---CQRLKEFSEK 224
           S   F   L+ +++ +         I ++ LGGG+  T  +          + L E  + 
Sbjct: 206 SIEPFLEALERLKRFYAKLQDMGLAIRYLDLGGGLGITYDEETPPHPQQLGEALAESLKD 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQES---AT 280
             V + LEPG  I  N   + + VL    +  K+  +VD+++   V   L          
Sbjct: 266 LDVTLILEPGRVIAGNAGIMVSKVLYTKTSEAKHFTVVDAAMNDLVRPSLYGAYHRLAEV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                      + G  C  GD   +      +  G+ I+      Y     + +N     
Sbjct: 326 TPQKRQELPMDIVGPICETGDFLAQDRTLPELAPGECIAAFSAGAYGFTMASQYNSRPRA 385

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + + D      R  +Y D   
Sbjct: 386 AEILVDGDQARIVRRRETYEDLIA 409


>gi|288931191|ref|YP_003435251.1| diaminopimelate decarboxylase [Ferroglobus placidus DSM 10642]
 gi|288893439|gb|ADC64976.1| diaminopimelate decarboxylase [Ferroglobus placidus DSM 10642]
          Length = 419

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 72/390 (18%), Positives = 135/390 (34%), Gaps = 29/390 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+    KL  N++           ++L A+K      +   + +   G    S  E
Sbjct: 24  GTPLYVTSYAKLKENIEAYKKAFN--WARVLYAVKANNNLAIMKVIAKENFGADVFSQGE 81

Query: 63  VMLGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKI 118
           + L     F  +   +N     + EI A + +      ++V +L    + A ++    +I
Sbjct: 82  LYLSLLAGFDKKFILFNGNSKSEEEIKAGIESGVKFSVDSVDELYTISEIASEMGEEVEI 141

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCENKS 171
             R+NP +              S+ G   +  +E+    +        G+  H   +   
Sbjct: 142 AFRVNPDIDPKTHPKIATGLKKSKFGIPAEQVVETYRLALELPNVVPIGIHCHIGSQITE 201

Query: 172 FLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKY 225
              F   +    ++ +        ++++ +GGG+    +       +D    LK   E+ 
Sbjct: 202 ISPFVEAVNKIFDLAERVEELGIDLKFVDVGGGLGIDYEGKGVPTPEDLANALKPVYEER 261

Query: 226 ------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES- 278
                 + +++LEPG ++V NTT L T V  +    KN V VD+     +   +      
Sbjct: 262 KSRLDSNPELWLEPGRSLVGNTTILLTRVNAVKRAYKNFVAVDAGFNLLIRPAMYGAYHK 321

Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
              A            V G  C +GD+ GE      V+ GD I+  D   Y     + +N
Sbjct: 322 IAVANKMDWEEEEVYTVVGPICESGDVLGEDRKLPRVEKGDIIAVFDAGAYGFVMSSQYN 381

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           G       +           + S+ D    
Sbjct: 382 GRPRCAEVLVKGSEAYVIREKESFGDLIAK 411


>gi|150007587|ref|YP_001302330.1| carboxynorspermidine decarboxylase [Parabacteroides distasonis ATCC
           8503]
 gi|255013886|ref|ZP_05286012.1| carboxynorspermidine decarboxylase [Bacteroides sp. 2_1_7]
 gi|298375531|ref|ZP_06985488.1| carboxynorspermidine decarboxylase [Bacteroides sp. 3_1_19]
 gi|149936011|gb|ABR42708.1| carboxynorspermidine decarboxylase [Parabacteroides distasonis ATCC
           8503]
 gi|298268031|gb|EFI09687.1| carboxynorspermidine decarboxylase [Bacteroides sp. 3_1_19]
          Length = 379

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 129/373 (34%), Positives = 198/373 (53%), Gaps = 9/373 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I +P Y+++++ L NNL     +++ AGV ++LA K FA W  F  + +Y+  +T+SS +
Sbjct: 7   IPSPCYVMEEKLLRNNLSLIKSVKERAGVNIILAFKAFALWKAFPIVREYIPFSTASSKF 66

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIG 119
           E  L  E+ G   H Y+ AY + +   +L     + FN++SQ ++F     A       G
Sbjct: 67  EAQLAFEEMGSPAHTYSPAYTEADFPLILRYSSHVTFNSLSQFHRFYPMVRADGNRVSCG 126

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           LRINP  S  +  L +P  P SR+G       +   + + GL FH  CE+ S+      L
Sbjct: 127 LRINPEYSDVETDLYNPCAPGSRMGVTGDLLGDKLPEGIEGLHFHTLCESTSYD-LERTL 185

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238
             +E+ FG F+  ++W+++GGG   T K Y V+     LK F E+Y   ++ +EPG A  
Sbjct: 186 AEVERRFGRFLPHVKWLNMGGGHLMTRKGYDVEHLIALLKGFKERYPNLELIMEPGSAFA 245

Query: 239 TNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVC 293
             T  L TTV+DI EN      I+D+S   H+PD L       I        G  T  + 
Sbjct: 246 WQTGFLLTTVVDIVENHGIKTAIIDASFTCHMPDCLEMPYKPAIRFATDAVEGKPTYRIG 305

Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353
           G SCL+GD  G++ F+KP++IGD++ FED+  Y I + N FNGI  P++A+ + D  +  
Sbjct: 306 GNSCLSGDYMGDWSFDKPLEIGDKLIFEDMIHYTIVKTNMFNGIPHPSLALWSKDDQLVM 365

Query: 354 IREFSYNDYYNNL 366
            R F Y DY N +
Sbjct: 366 YRTFGYEDYKNRM 378


>gi|301310449|ref|ZP_07216388.1| carboxynorspermidine decarboxylase [Bacteroides sp. 20_3]
 gi|300832023|gb|EFK62654.1| carboxynorspermidine decarboxylase [Bacteroides sp. 20_3]
          Length = 379

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 131/373 (35%), Positives = 199/373 (53%), Gaps = 9/373 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I +P Y+++++ L NNL     +++ AGV ++LA K FA W  F  + +Y+  +T+SS +
Sbjct: 7   IPSPCYVMEEKLLRNNLSLIKSVKERAGVNIILAFKAFALWKAFPIVREYIPFSTASSKF 66

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIG 119
           E  L  E+ G   H Y+ AY + +   +L     + FN++SQ ++F     A       G
Sbjct: 67  EAQLAFEEMGSPAHTYSPAYTEADFPLILRYSSHVTFNSLSQFHRFYPMVRADGNRVSCG 126

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           LRINP  S  +  L +P  P SR+G       ++  + + GL FH  CE+ S+      L
Sbjct: 127 LRINPEYSDVETDLYNPCAPGSRMGVTGDLLGDTLPEGIEGLHFHTLCESTSYD-LERTL 185

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238
             +E+ FG F+  ++W+++GGG   T KDY V+     LK F E+Y   ++ +EPG A  
Sbjct: 186 AEVERRFGRFLPHVKWLNMGGGHLMTRKDYDVEHLIALLKGFKERYPNLELIMEPGSAFA 245

Query: 239 TNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVC 293
             T  L TTV+DI EN      I+D+S   H+PD L       I        G  T  + 
Sbjct: 246 WQTGFLLTTVVDIVENHGIKTAIIDASFTCHMPDCLEMPYKPAIRFATDAVEGKPTYRIG 305

Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353
           G SCL+GD  G++ F+KP+ IGD++ FED+  Y I + N FNGI  P++A+ N D  +  
Sbjct: 306 GNSCLSGDYMGDWSFDKPLAIGDKLIFEDMIHYTIVKTNMFNGIPHPSLALWNKDNQLVM 365

Query: 354 IREFSYNDYYNNL 366
            R F Y DY N +
Sbjct: 366 YRTFGYEDYKNRM 378


>gi|52550218|gb|AAU84067.1| diaminopimelate decarboxylase [uncultured archaeon GZfos36D8]
          Length = 425

 Score =  251 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 72/395 (18%), Positives = 130/395 (32%), Gaps = 32/395 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D+ KL NN  +     +   +   +  A+K      +   L     G    S 
Sbjct: 23  GTPLYVTDENKLRNNFKSYKNAFETTNIDTDIYYAVKANGNLALLKILASEGAGADVFSA 82

Query: 61  YEVMLG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
            E+ L        E   +N     D ++   + +   +  ++V +L      A +L    
Sbjct: 83  GELELTKLAGIPAEKILFNGNSKSDDDLKEAVESGVRVSVDSVDELRALSAVANELGREV 142

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCEN 169
           +I +R+NP VS             S+ G         C++  +     + GL  H   + 
Sbjct: 143 EIAIRVNPDVSPDVHAKIATGLKESKFGIPFHDVIPVCEEAEKLPNVLLAGLHCHIGSQI 202

Query: 170 KSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDY------PVKDFCQRLKE 220
                F    + +            Q++++ LGGG+    +          +D  + +  
Sbjct: 203 LDITVFGEATEKMMALVERVYERGMQLKFVDLGGGLGIGYRQEEKATAPTPEDLAEMILP 262

Query: 221 FSEKYSVQI------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLL 274
             E     +       LEPG +IV  +T L + V  +    KN V +D+     +   + 
Sbjct: 263 LFENKIRDLGISLKLVLEPGRSIVGASTILLSRVNAVKRANKNFVAIDAGFNLLIRPVMY 322

Query: 275 YQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                 +  N           V G  C +GDI  +      V+ GD ++  D   Y  + 
Sbjct: 323 DAYHEVVVANKVNERASELYTVVGNVCESGDIMAKDRMLPKVERGDLVAILDTGAYGFSM 382

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            + +NG       +             S  D   N
Sbjct: 383 SSQYNGRPRCAEVLVCNGKADLIRSRESIEDLIRN 417


>gi|253997642|ref|YP_003049706.1| diaminopimelate decarboxylase [Methylotenera mobilis JLW8]
 gi|253984321|gb|ACT49179.1| diaminopimelate decarboxylase [Methylotenera mobilis JLW8]
          Length = 416

 Score =  251 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 67/387 (17%), Positives = 129/387 (33%), Gaps = 23/387 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+  K  L    +      K+A   +  A+K   +  + +   +   G    S  E
Sbjct: 26  GSPCYVYSKAALSQAFERFSAGFKDANHLVCFAVKSNPSLAILNLFAKLGAGFDIVSGGE 85

Query: 63  -VMLGHEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
              +       +   ++   K  +    A+ +        + S+L +  D A  + K   
Sbjct: 86  LARVIAAGGDPKKVVFSGVGKTAEEMRAALEAGIFCFNVESASELIRLNDVAAYMGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           + LR+NP+V              ++ G   +D ++            ++G+  H   +  
Sbjct: 146 VSLRVNPNVDAKTHPYISTGLKNNKFGVAYEDALDIYLQAAEMSNIAIHGVDCHIGSQIT 205

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
               F      +            QI+ I LGGGI     D    +   + + ++E    
Sbjct: 206 ELSPFLDAFDRVLALVDALAENNIQIQHIDLGGGIGICYSDETPPEFTAYAKAMREKLGN 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280
             V++  EPG A+V N   L T V  +         IVD+++   +   L        A 
Sbjct: 266 RDVKLVFEPGRALVGNAGVLLTKVEYLKPTESKNFAIVDAAMNDLMRPALYDAYHDIQAV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              N       + G  C +GD  G       ++ GD ++      Y ++  + +N     
Sbjct: 326 APRNEAAVNYEIVGPVCESGDFLGHDRNLA-LQEGDLLAIMSAGAYGMSMSSNYNTRPRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNNLS 367
              + + D      +     D + N S
Sbjct: 385 AEVMVDGDQCHLIKKRELIADLFANES 411


>gi|34540015|ref|NP_904494.1| carboxynorspermidine decarboxylase [Porphyromonas gingivalis W83]
 gi|34396326|gb|AAQ65393.1| carboxynorspermidine decarboxylase [Porphyromonas gingivalis W83]
          Length = 378

 Score =  251 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 116/372 (31%), Positives = 182/372 (48%), Gaps = 8/372 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I +P Y++++  L  NL     +    GV+++LA K +A W  F  + +Y+  +T+SS++
Sbjct: 7   IASPAYILEEDLLRRNLSLIASVADRTGVEIILAFKAYALWRTFPIIREYVPHSTASSVW 66

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+ G   H ++ AY   E   +L     + FN++SQ        + +   +GLR
Sbjct: 67  EARLAFEEMGAPAHTFSPAYTPEEFPEILRYSSHVTFNSLSQYYLLSPMVKNVGVSLGLR 126

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP  S  +  L +P  P SR G    +  ++  + + GL FH  CE+  +      LK 
Sbjct: 127 INPEYSAVETALYNPCAPGSRFGVSASELGDTLPEGIEGLHFHTLCESTGYE-LEKTLKI 185

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240
           IE  F   + Q  W+++GGG   T +DY V+   Q L +FS ++    + +EPG A    
Sbjct: 186 IEDRFASVLEQAHWLNMGGGHLMTRRDYDVEHLVQVLNDFSRRHPHLHLIMEPGSAFGWQ 245

Query: 241 TTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-----YTAMVCG 294
           T  L +TV+DI         IVD S   H+PD L       I            T  + G
Sbjct: 246 TGFLKSTVVDIVEHQGIATAIVDVSFTCHMPDCLEMPYKPVIRGAHQEPVPGLPTYRIGG 305

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            SCL+GD  G++ F++P+++GD + FED+  Y   +   FNG   P I +   DG  + +
Sbjct: 306 CSCLSGDFIGDWSFDRPLQVGDELIFEDMLHYTTVKTTMFNGARHPDIVLLRTDGKKEVL 365

Query: 355 REFSYNDYYNNL 366
           R F Y DY N +
Sbjct: 366 RRFDYEDYKNRM 377


>gi|256839772|ref|ZP_05545281.1| carboxynorspermidine decarboxylase [Parabacteroides sp. D13]
 gi|256738702|gb|EEU52027.1| carboxynorspermidine decarboxylase [Parabacteroides sp. D13]
          Length = 379

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 128/373 (34%), Positives = 198/373 (53%), Gaps = 9/373 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I +P Y+++++ L NN+     +++ AGV ++LA K FA W  F  + +Y+  +T+SS +
Sbjct: 7   IPSPCYVMEEKLLRNNVSLIKSVKERAGVNIILAFKAFALWKAFPIVREYIPFSTASSKF 66

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIG 119
           E  L  E+ G   H Y+ AY + +   +L     + FN++SQ ++F     A       G
Sbjct: 67  EAQLAFEEMGSPAHTYSPAYTEADFPLILRYSSHVTFNSLSQFHRFYPMVRADGNRVSCG 126

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           LRINP  S  +  L +P  P SR+G       +   + + GL FH  CE+ S+      L
Sbjct: 127 LRINPEYSDVETDLYNPCAPGSRMGVTGDLLGDKLPEGIEGLHFHTLCESTSYD-LERTL 185

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238
             +E+ FG F+  ++W+++GGG   T K Y V+     LK F E+Y   ++ +EPG A  
Sbjct: 186 AEVERRFGRFLPHVKWLNMGGGHLMTRKGYDVEHLIALLKGFKERYPNLELIMEPGSAFA 245

Query: 239 TNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVC 293
             T  L TTV+DI EN      I+D+S   H+PD L       I        G  T  + 
Sbjct: 246 WQTGFLLTTVVDIVENHGIKTAIIDASFTCHMPDCLEMPYKPAIRFATDAVEGKPTYRIG 305

Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353
           G SCL+GD  G++ F+KP++IGD++ FED+  Y I + N FNGI  P++A+ + D  +  
Sbjct: 306 GNSCLSGDYMGDWSFDKPLEIGDKLIFEDMIHYTIVKTNMFNGIPHPSLALWSKDDQLVM 365

Query: 354 IREFSYNDYYNNL 366
            R F Y DY N +
Sbjct: 366 YRTFGYEDYKNRM 378


>gi|150006033|ref|YP_001300777.1| carboxynorspermidine decarboxylase [Bacteroides vulgatus ATCC 8482]
 gi|254881795|ref|ZP_05254505.1| carboxynorspermidine decarboxylase [Bacteroides sp. 4_3_47FAA]
 gi|319641187|ref|ZP_07995888.1| carboxynorspermidine decarboxylase [Bacteroides sp. 3_1_40A]
 gi|149934457|gb|ABR41155.1| carboxynorspermidine decarboxylase [Bacteroides vulgatus ATCC 8482]
 gi|254834588|gb|EET14897.1| carboxynorspermidine decarboxylase [Bacteroides sp. 4_3_47FAA]
 gi|317387161|gb|EFV68039.1| carboxynorspermidine decarboxylase [Bacteroides sp. 3_1_40A]
          Length = 387

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 124/382 (32%), Positives = 192/382 (50%), Gaps = 17/382 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P Y++D+  L  NL     +   AGV+++LA K FA W  F    +Y+  TT+SS+Y
Sbjct: 7   VPSPCYVMDEALLRKNLSLIKSVADRAGVEIILAFKSFAMWKSFPIFREYIRYTTASSVY 66

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIG 119
           E  L +E+FG + H Y+ AY D +   ++     I FN+ SQ  +F     A       G
Sbjct: 67  EARLAYEEFGSKAHTYSPAYTDTDFPVIMRCSSHITFNSFSQFRRFYPMVEAFGEKITCG 126

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +RINP  S  +  L +P  P +R G       E+  + + G   H +CE+ S+      L
Sbjct: 127 IRINPEYSEVEVELYNPCAPGTRFGVTADLLPETLPEGIEGFHCHCHCESSSYE-LEHTL 185

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238
           ++IE++F  +  QI+W++LGGG   T KDY  +     LK    +Y   +I LEPG A  
Sbjct: 186 QHIEEKFASWFPQIKWLNLGGGHLMTRKDYDTEHLISLLKNLKARYPHLEIILEPGSAFT 245

Query: 239 TNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTG----------- 286
             T  L  +V+DI EN      + D S   H+PD L       +                
Sbjct: 246 WQTGPLVASVVDIVENRGIKTAILDVSFTCHMPDCLEMPYQPAVRGAKTLPVDAIKTALT 305

Query: 287 -PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
                 + G SCL+GD  G + F+ P++IG+RI  ED+  Y + + N FNGI+ P+IA+ 
Sbjct: 306 EENVYRLGGNSCLSGDYMGSWCFDHPLQIGERIVLEDMIHYTMVKTNMFNGIHHPSIAIW 365

Query: 346 NVDGTIKAIREFSYNDYYNNLS 367
           + D T++  ++F Y DY + +S
Sbjct: 366 HTDNTLEVYKDFRYEDYRDRMS 387


>gi|85708349|ref|ZP_01039415.1| carboxynorspermidine decarboxylase [Erythrobacter sp. NAP1]
 gi|85689883|gb|EAQ29886.1| carboxynorspermidine decarboxylase [Erythrobacter sp. NAP1]
          Length = 397

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 105/380 (27%), Positives = 182/380 (47%), Gaps = 15/380 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALY-----IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTT 56
           + +P +++D  K+  N               A +K+  ALK F+ W +   + +Y+DG +
Sbjct: 19  VDSPSFVVDAAKIRENCQILADIRDAAASDGASIKVFAALKAFSMWSVAPIMGEYLDGVS 78

Query: 57  SSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
           +S L+E  L  E + G+   Y+ A+K  +++ +    + +IFN+ +Q+ +      +   
Sbjct: 79  TSGLWEARLASEFYDGDIATYSAAFKPEDLEEICRLSEHVIFNSPAQMQRAALILDQAQV 138

Query: 117 K-----IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS 171
                 +GLR+NP V+  +    DP+ P SRLG       E  ++ V G+ FHN CE   
Sbjct: 139 TGGDVSVGLRLNPMVATGEVPKYDPSAPGSRLGFPIDQLTEEHMEGVEGIHFHNLCEQT- 197

Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYL 231
           F         +      +  Q++WI++GGG H T  DY      + L++ +E    +I +
Sbjct: 198 FEPLRQTWDRVFDVIEPWFGQLKWINMGGGHHITRADYERDKLVEFLRDAAEDTGAEIII 257

Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY---PNTGPY 288
           EPGEA+  +   L  T+LD   N   + I D S   H+PD L       +     +    
Sbjct: 258 EPGEAVALDAGILVGTLLDTGFNDVPIGITDISATCHMPDVLEAPYRPAMLGELTDEDKI 317

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348
              + G SCLAGD+ G++    P   G R +F D A Y++ + N FNG+ +P+I + + +
Sbjct: 318 PIRLGGPSCLAGDVIGDYRLPVPADPGARFAFLDQAHYSMVKTNTFNGVPLPSIWLWDSE 377

Query: 349 -GTIKAIREFSYNDYYNNLS 367
              +  ++ F Y D+ + LS
Sbjct: 378 TDALDCVKRFEYEDFRDRLS 397


>gi|255323023|ref|ZP_05364159.1| carboxynorspermidine decarboxylase [Campylobacter showae RM3277]
 gi|255299885|gb|EET79166.1| carboxynorspermidine decarboxylase [Campylobacter showae RM3277]
          Length = 379

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 131/372 (35%), Positives = 204/372 (54%), Gaps = 9/372 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           IK P Y+ ++ K+  NL+    ++  +G K+L+ALK FA  G+   + +Y+DG T S L+
Sbjct: 8   IKMPAYVCEEAKVRANLEILKRVKDESGAKVLVALKGFAFSGVMGLVGEYLDGATCSGLH 67

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E     +   GE H Y+ A+KD +ID VL+    ++FN+ +Q  KFK KA       GLR
Sbjct: 68  EAKFAQKHVRGEIHTYSPAFKDEDIDEVLALSKHVVFNSFAQWAKFKQKALAAGVTCGLR 127

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP +S +     +P   +SRLG    +     +  + GL FH  CE +S      +L  
Sbjct: 128 VNPELSVAPTDAYNPCGRYSRLGITRANFDADALDGITGLHFHALCE-ESAQSLETVLMA 186

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            E++FG FI +++W++ GGG H T + Y V      +K F EKY V++Y+EPGEA+   T
Sbjct: 187 FEEKFGEFIPRMKWVNFGGGHHVTKEGYDVDLLINLIKNFREKYGVEVYIEPGEAVGWQT 246

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT--GPYTAMVCGRSCLA 299
             L  +VLD  +N K + I+D S EAH+PD +L      +   +  G ++    G +CLA
Sbjct: 247 GFLAASVLDFVQNEKTIAILDVSAEAHMPDTVLMPYRPAVRGESKGGKFSYRFGGNTCLA 306

Query: 300 GDIFG------EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353
           GDI G      E+ F+ P+ +GD++ FED   Y I +   FNGI +P + +   +G +  
Sbjct: 307 GDIVGLDAGEPEYKFDAPLSVGDKVIFEDQIHYTIVKNTTFNGIKLPDLLLLKENGELVT 366

Query: 354 IREFSYNDYYNN 365
           +REF + +Y   
Sbjct: 367 VREFGFEEYERR 378


>gi|114763331|ref|ZP_01442755.1| carboxynorspermidine decarboxylase [Pelagibaca bermudensis
           HTCC2601]
 gi|114544129|gb|EAU47139.1| carboxynorspermidine decarboxylase [Roseovarius sp. HTCC2601]
          Length = 376

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 203/366 (55%), Positives = 265/366 (72%), Gaps = 3/366 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TPYYLIDK +LL N++   ++R+ +G K LLALKCFA W +FD +++YMDGTTSSSL+
Sbjct: 14  MQTPYYLIDKSRLLPNMEKIAHLREQSGAKALLALKCFATWSVFDMMSEYMDGTTSSSLF 73

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG EKF GETHAY+VA+   EID VL++ D +IFNT  QL +F++K++      GLR
Sbjct: 74  EVKLGREKFSGETHAYSVAWAPDEIDEVLASSDKVIFNTAQQLQRFEEKSRDHT--RGLR 131

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP VS S F LADP RPFSRLGE   + IE   + ++G MFHNNCEN SF  F  ML  
Sbjct: 132 VNPGVSTSGFDLADPARPFSRLGEHAPEDIEPVAELISGFMFHNNCENASFERFDEMLGQ 191

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           IE  FG  I +++WISLGGGIHFT +DYP+    +RLK F+ +  VQ+YLEPGEA +T +
Sbjct: 192 IEARFGPLIKRMKWISLGGGIHFTGEDYPLDKLAERLKRFAGENEVQVYLEPGEAAITKS 251

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGD 301
           TTL  TVLD   N KNL IVDSS+EAH+ D L+Y+ESA +   +G    M+CG+SCLAGD
Sbjct: 252 TTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIYRESAKM-QESGDQEWMICGKSCLAGD 310

Query: 302 IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361
           IFGEF F K ++ GDR+S +D AGY + +KNWFNG+ MP+IA++ +DGT + +R F Y D
Sbjct: 311 IFGEFRFPKALQAGDRLSLQDAAGYTMVKKNWFNGVQMPSIAIRELDGTERLVRSFGYED 370

Query: 362 YYNNLS 367
           +   LS
Sbjct: 371 FAAALS 376


>gi|265753475|ref|ZP_06088830.1| carboxynorspermidine decarboxylase [Bacteroides sp. 3_1_33FAA]
 gi|263235189|gb|EEZ20713.1| carboxynorspermidine decarboxylase [Bacteroides sp. 3_1_33FAA]
          Length = 387

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 124/382 (32%), Positives = 193/382 (50%), Gaps = 17/382 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P Y++D+  L  NL     +   AGV+++LA K FA W  F    +Y+  TT+SS+Y
Sbjct: 7   VPSPCYVMDEALLRKNLSLIKSVADRAGVEIILAFKSFAMWKSFSVFREYIRYTTASSVY 66

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIG 119
           E  L +E+FG + H Y+ AY D +   ++     I FN+ SQ  +F    KA       G
Sbjct: 67  EARLAYEEFGSKAHTYSPAYTDTDFPVIMQCSSHITFNSFSQFRRFYPMVKASGEKISCG 126

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +RINP  S  +  L +P  P +R G       E+  + + G   H +CE+ S+      L
Sbjct: 127 IRINPEYSEVEVELYNPCAPGTRFGVTADLLPETLPEGIEGFHCHCHCESSSYE-LEHTL 185

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238
           ++IE+ F  +  QI+W++LGGG   T KDY  +     LK    +Y   +I LEPG A  
Sbjct: 186 QHIEETFARWFPQIKWLNLGGGHLMTRKDYDTEHLISLLKGLKARYPHLEIILEPGSAFT 245

Query: 239 TNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTG----------- 286
             T  L  +V+DI EN      + D S   H+PD L       +                
Sbjct: 246 WQTGPLVASVVDIVENRGIKTAILDVSFTCHMPDCLEMPYQPAVRGAEALPVDAIKTALT 305

Query: 287 -PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
                 + G SCL+GD  G + F+ P+++G+RI  ED+  Y + + N FNGI+ P+IA+ 
Sbjct: 306 EENIYRLGGNSCLSGDYMGSWRFDHPLQVGERIVLEDMIHYTMVKTNMFNGIHHPSIAIW 365

Query: 346 NVDGTIKAIREFSYNDYYNNLS 367
           ++D T++  ++F Y DY + +S
Sbjct: 366 HIDNTLEVYKDFRYEDYRDRMS 387


>gi|294778329|ref|ZP_06743754.1| carboxynorspermidine decarboxylase [Bacteroides vulgatus PC510]
 gi|294447836|gb|EFG16411.1| carboxynorspermidine decarboxylase [Bacteroides vulgatus PC510]
          Length = 387

 Score =  250 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 124/382 (32%), Positives = 192/382 (50%), Gaps = 17/382 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P Y++D+  L  NL     +   AGV+++LA K FA W  F    +Y+  TT+SS+Y
Sbjct: 7   VPSPCYVMDEALLRKNLSLIKSVADRAGVEIILAFKSFAMWKSFPIFREYIRYTTASSVY 66

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIG 119
           E  L +E+FG + H Y+ AY D +   ++     I FN+ SQ  +F     A       G
Sbjct: 67  EARLAYEEFGSKAHTYSPAYTDTDFPVIMRCSSHITFNSFSQFRRFYPMVEAFGEKITCG 126

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +RINP  S  +  L +P  P +R G       E+  + + G   H +CE+ S+      L
Sbjct: 127 IRINPEYSEVEVELYNPCAPGTRFGVTADLLPETLPEGIEGFHCHCHCESSSYE-LEHTL 185

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238
           ++IE++F  +  QI+W++LGGG   T KDY  +     LK    +Y   +I LEPG A  
Sbjct: 186 QHIEEKFASWFPQIKWLNLGGGHLITRKDYDTEHLISLLKNLKARYPHLEIILEPGSAFT 245

Query: 239 TNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTG----------- 286
             T  L  +V+DI EN      + D S   H+PD L       +                
Sbjct: 246 WQTGPLVASVVDIVENRGIKTAILDVSFTCHMPDCLEMPYQPAVRGAKTLPVDAIKTALT 305

Query: 287 -PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
                 + G SCL+GD  G + F+ P++IG+RI  ED+  Y + + N FNGI+ P+IA+ 
Sbjct: 306 EENVYRLGGNSCLSGDYMGSWCFDHPLQIGERIVLEDMIHYTMVKTNMFNGIHHPSIAIW 365

Query: 346 NVDGTIKAIREFSYNDYYNNLS 367
           + D T++  ++F Y DY + +S
Sbjct: 366 HTDNTLEVYKDFRYEDYRDRMS 387


>gi|269925950|ref|YP_003322573.1| diaminopimelate decarboxylase [Thermobaculum terrenum ATCC BAA-798]
 gi|269789610|gb|ACZ41751.1| diaminopimelate decarboxylase [Thermobaculum terrenum ATCC BAA-798]
          Length = 418

 Score =  250 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 62/383 (16%), Positives = 120/383 (31%), Gaps = 21/383 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP Y+     + N              K+  +LK      +   L     G   +S  E
Sbjct: 28  QTPLYVYSANYIRNAYQKLKESFGGFPTKICYSLKSNPNIWIGKLLADLGAGADVTSGGE 87

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +       F  E   +    K      +A+ S        +  +L K  + AQ L++   
Sbjct: 88  LFRALKAGFNPEDIVFAGVGKSSREIVEALRSGVGLFSIESEQELRKISELAQSLNRVAN 147

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNCENK 170
           I +R+NP++              ++ G   ++ +             + G+  H   +  
Sbjct: 148 ISIRVNPNIDPHTHEKITTGLRSNKFGVPIEEALRVYQLACTLPAIRIVGIGMHIGSQLV 207

Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEK 224
           +          I            ++E+I +GGG     K       +   + L+     
Sbjct: 208 NLDPVIQAANTILDMAEELINTGIRLEYIDIGGGFGIKYKDESPEDPEIVAKALERRLRD 267

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESA--TI 281
             +++ +EPG  I   +  L T+VL    +  K  VIVD+ + A +   L         +
Sbjct: 268 LKLKLIIEPGRFISGPSGALLTSVLYTKTSGGKKFVIVDAGMNALIRPALYDAYHHIQPL 327

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                     V G  C + D   +      V   + I+      Y     + +N    P 
Sbjct: 328 VRRDKTEIVDVVGPICESSDYLAKDRLLPQVFPTETIAILQAGAYGFAMASEYNSHPRPA 387

Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364
             + + +      +  +Y D   
Sbjct: 388 EILVDGNKVRLIRKRQTYEDLIR 410


>gi|268323184|emb|CBH36772.1| diaminopimelate decarboxylase [uncultured archaeon]
          Length = 419

 Score =  250 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 71/391 (18%), Positives = 128/391 (32%), Gaps = 30/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D+  L NN  +     K+A      A+K      +   L     G    S  E
Sbjct: 23  GTPLYVTDEDMLRNNFRSYNSAFKSADK--YYAVKANGNLAILKILASEGAGADVFSGGE 80

Query: 63  VMLGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKI 118
           + L        +   +N     + E+ AV+     +  ++  ++      A       +I
Sbjct: 81  LQLVKSAGIPRDKILFNGNSKSEEELRAVVEAGVKVSVDSHDEMRTLSAIAVAMDKEVEI 140

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGE-------KCKDKIESEIKNVNGLMFHNNCENKS 171
            +R+NP VS             S+ G         C+D        + GL  H   +   
Sbjct: 141 AIRVNPDVSPKVNPKIATGLRESKFGIPFYEVIATCEDAKMLPNITLTGLHCHIGSQILD 200

Query: 172 FLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK 224
              FS   + +            ++E++ LGGG+  + +         D    +    + 
Sbjct: 201 VSVFSEATEKMMNLVEELYARGMELEFVDLGGGLGISHRKEEKAPTPNDLADAILPTFDA 260

Query: 225 YSV------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                    ++ LEPG +IV   T L   V  + +  KN V +D+     +   +     
Sbjct: 261 RLDSLGIKLKLVLEPGRSIVGPATILLCRVNTVKQAYKNFVAIDAGFNLFMRPVMYGAYH 320

Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
             +  N           V G  C +GDI  +      V+ GD ++  +   Y  +  + +
Sbjct: 321 EVVVANKLNEQASVLCTVVGPVCESGDILAKDRMLPEVERGDLVAILNAGAYGFSMSSQY 380

Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           NG       +           + S +D   N
Sbjct: 381 NGRPRCAEVLICDGKVDVIRTKESVDDLIRN 411


>gi|85373773|ref|YP_457835.1| carboxynorspermidine decarboxylase [Erythrobacter litoralis
           HTCC2594]
 gi|84786856|gb|ABC63038.1| carboxynorspermidine decarboxylase [Erythrobacter litoralis
           HTCC2594]
          Length = 415

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 116/398 (29%), Positives = 189/398 (47%), Gaps = 33/398 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P +++D  KL  NL     IR  +  K+L ALK F+ + +   + +Y+DG  +S L+
Sbjct: 19  VDSPAFVVDAAKLRANLQILAEIRDVSETKMLSALKAFSMFSVAPIIGEYLDGVCTSGLF 78

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH-----K 116
           E  L  E + GE   Y  AYK  +++ V    D +IFN+  Q+ + +   ++        
Sbjct: 79  EARLASEFYDGEISTYCAAYKPEDLEEVCRLSDHVIFNSPQQIERARLILEQAQVTGGDF 138

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
            +GLRINP V   +    DP+ P SRLG          ++ + G+ FHN CE   F    
Sbjct: 139 SVGLRINPQVPTGEVPRYDPSSPGSRLGFPIDQLTPEIMEGIEGIHFHNLCEQD-FEPLH 197

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
                +      +  Q++WI++GGG H T  DY  ++  + LK+  E    +IYLEPGEA
Sbjct: 198 RTWDKVFDAIEPWFGQLKWINMGGGHHITRADYQREELVELLKDAKEDTGAEIYLEPGEA 257

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT------- 289
           +  +   L  T+LD   N     I D S   H+PD +       +       +       
Sbjct: 258 VALDAGILVGTILDNGVNEVPFAITDVSATCHMPDVIEAPYRPAMLHENIEASPSESWDL 317

Query: 290 -------------------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                                + G SCLAGD+ G++H  +P + G RI+F D A Y++ +
Sbjct: 318 SQTGSEPREAPAFAGAQGAVRLGGPSCLAGDVIGDYHLPEPNEPGQRIAFLDQAHYSMVK 377

Query: 331 KNWFNGINMPTIAVKNVD-GTIKAIREFSYNDYYNNLS 367
            N FNG+ +P+I + + +   ++ ++EF Y D+ + LS
Sbjct: 378 TNTFNGVPLPSIWLWDSETDQLELVKEFGYEDFRDRLS 415


>gi|302035867|ref|YP_003796189.1| diaminopimelate decarboxylase [Candidatus Nitrospira defluvii]
 gi|300603931|emb|CBK40263.1| Diaminopimelate decarboxylase [Candidatus Nitrospira defluvii]
          Length = 420

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 65/386 (16%), Positives = 118/386 (30%), Gaps = 24/386 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+     L+ +        +N    +  A+K  +   +   + +   G    S  
Sbjct: 25  VGTPCYVYSHHTLVRHFRVYDSAFQNIPHIVAFAMKANSNLAVLRMMAKEGSGVDIVSGG 84

Query: 62  EVMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116
           E+              +       +   DA+ ++       + ++L    D A    +  
Sbjct: 85  ELFRALKAGVPPGKIVFAGVGKKPEEIRDALKADILMFNVESSAELQAINDVAASMGVKA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCEN 169
           ++ LRINP +              S+ G      IE            V GL  H   + 
Sbjct: 145 RVALRINPDIDPKTHPYISTGLKKSKFGIAADRAIEEFKAAAAFSHIEVVGLHAHIGSQL 204

Query: 170 KSFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF---CQRLKEFSE 223
                F   LK    + +        I ++++GGG+  T  D    +       +     
Sbjct: 205 TQVAPFVESLKKVLTMVQTLAEQGIPIRYLNIGGGLGITYSDETPPEPKDLAAAIFPLVR 264

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIY 282
                + +EPG  IV N   L T VL   +   K  +IVD+++   +   L         
Sbjct: 265 DLKCVLIMEPGRVIVGNAGVLLTKVLYTKDGETKRFLIVDAAMNDLIRPSLYDAHHDIKP 324

Query: 283 PNT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                      T  V G  C +GD   +      +  GD ++      Y     + +N  
Sbjct: 325 VYENVARGAKETVDVVGPVCESGDFLAKDRAMPEMNAGDLMAVMSAGAYGFVMSSNYNSR 384

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYY 363
                 + +           SY+D  
Sbjct: 385 PRVPEVLVHEGQIHVIRARESYDDLV 410


>gi|330812549|ref|YP_004357011.1| diaminopimelate decarboxylase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327380657|gb|AEA72007.1| diaminopimelate decarboxylase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 415

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 62/384 (16%), Positives = 120/384 (31%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +     T     +     +  A+K  +  G+ + L +   G    S  E
Sbjct: 26  GTPTYVYSRAHIEAQYRTFADALEGMPHLVCFAVKANSNLGVLNVLARLGAGFDIVSGGE 85

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +          +   ++     ++    A+          +  +L + +  A +L     
Sbjct: 86  LERVLAAGGSADKIVFSGVGKTREDMRRALEVGVHCFNIESTDELERLQIVAAELGVRAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G    D         +     V G+  H   +  
Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIADAEDVYVRAAQLPNLEVLGVDCHIGSQLT 205

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
           +   F   L     +    G     +  I LGGG+    +D         +K   E+   
Sbjct: 206 TLEPFIDALDRLLALVDRLGDCGIYLRHIDLGGGVGVRYRDEEPPLVADYIKAVRERLDG 265

Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280
           +   +  EPG  IV N   L T V  +         IVD+++   +   L        A 
Sbjct: 266 RDLALMFEPGRYIVANAGVLLTQVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVTAV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              +T   +  + G  C  GD   +      ++ GD ++      Y     + +N     
Sbjct: 326 RPRDTAARSYDIVGPICETGDFLAKGRELA-LEEGDLLAVHSAGAYGFVMSSNYNTRGRC 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + + D   +  R  +  + + 
Sbjct: 385 AEVLVDGDQAFEVRRRETVVELFA 408


>gi|83944426|ref|ZP_00956880.1| diaminopimelate decarboxylase [Sulfitobacter sp. EE-36]
 gi|83844749|gb|EAP82632.1| diaminopimelate decarboxylase [Sulfitobacter sp. EE-36]
          Length = 421

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 58/390 (14%), Positives = 120/390 (30%), Gaps = 26/390 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+     LL +              +  A+K  +   +  TL Q   G    S  
Sbjct: 25  VGTPFYVYSTATLLRHFKAFDDALDGMDHLVCYAMKANSNQAVLKTLAQAGAGMDVVSAG 84

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116
           E +        G+   ++   K       A+          +  ++      A+ + K  
Sbjct: 85  EYLRAKAAGVPGDKIVFSGVGKTVSEIRLALEGGIRQFNVESEPEMEVLDAVARSMDKVA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
            I +R+NP V           +  ++ G       E            V G+  H   + 
Sbjct: 145 PITIRVNPDVDAKTHAKIATGKSENKFGIPIARAREVYRMAAAMPGLEVVGIDVHIGSQL 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221
                F    + + +   +       I  + LGGG+    +          D+   +++ 
Sbjct: 205 TDLTPFELAYQKVAELTEQLRADGHTIRRLDLGGGLGIPYERSNAAPPLPTDYGAMVQKT 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESAT 280
                 +I +EPG  I  N   + + V+ +         I+D ++   +   +       
Sbjct: 265 LGHLGCEIEIEPGRLIAGNAGLMVSEVIYVKSGEGRDFLIIDGAMNDLIRPAMYEAHHDI 324

Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           I               + G  C +GD F +      +  GD ++F     Y     + +N
Sbjct: 325 IPVVEAEAGAEQQPYDIVGPVCESGDTFAKQRMMPKLAAGDLVAFRSAGAYGAVMASEYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              +    + + D      R  ++++  N 
Sbjct: 385 SRALIPEVLVHGDQFAVIRRRPTFDEMINR 414


>gi|149194454|ref|ZP_01871551.1| Diaminopimelate decarboxylase [Caminibacter mediatlanticus TB-2]
 gi|149135629|gb|EDM24108.1| Diaminopimelate decarboxylase [Caminibacter mediatlanticus TB-2]
          Length = 402

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 65/385 (16%), Positives = 116/385 (30%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D        +      K     +  A+K  +   +         G    S+ E
Sbjct: 11  DTPLYVYDFNHFEKQYNELKQAFKARKSIIAYAIKANSNLSVIKKFASLGSGADCVSIGE 70

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKAQKLHKKIG 119
           V              ++   K  +      + D +     + ++L +  + A+ ++K+  
Sbjct: 71  VKRALLAGVDKYKIIFSGVGKRDDEIKEALDKDILMLNVESEAELKRIDEIAKSMNKEAR 130

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENK 170
           +  R+NP +              ++ G   +       +  +S+  N  G+ FH   +  
Sbjct: 131 ISIRVNPDIDPKTHPYISTGLSENKFGVDIESAKKMYINAKKSKNLNPIGIHFHIGSQLT 190

Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP---VKDFCQRLKEFSEK 224
                    + +             I++  +GGG+    KD       D+ Q +      
Sbjct: 191 ELNPIKEASEIVANLVRSLKAINVDIKFFDIGGGLGIKYKDEETIKPYDYAQAILSTLSG 250

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES--ATI 281
             V I  EPG  +V N     T VL       K  VIVD ++   +   L         I
Sbjct: 251 LDVTIICEPGRFLVGNGGWFLTKVLYEKVNGDKRFVIVDGAMNDLIRPSLYNAYHKVEVI 310

Query: 282 YPNTGPY--TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                P    A + G  C +GD F +         GD I       Y     + +N    
Sbjct: 311 SSVKNPQISKANIVGPVCESGDFFAKDIEVPQTNPGDLIVIHSAGAYGFTMSSNYNTRPR 370

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
           P              R  ++ D   
Sbjct: 371 PCEIAIEDGKDRVIRRRETFEDLIA 395


>gi|221133748|ref|ZP_03560053.1| Carboxynorspermidine decarboxylase [Glaciecola sp. HTCC2999]
          Length = 378

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 127/371 (34%), Positives = 202/371 (54%), Gaps = 7/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I +P Y++++ KL++NL    +++   GV ++LALK F+ W  FD +++Y+ G T+S+L+
Sbjct: 10  IPSPCYVLEEAKLIDNLKLMAHVQAATGVDIILALKGFSMWSCFDLVSKYLQGGTASALW 69

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L     G + HA++ A+K  E+DA+++  D I FN+++Q    KD  ++ +  +GLR
Sbjct: 70  EAKLAKR-LGKQVHAFSPAFKTAEMDAIVNEVDHISFNSLAQYLMHKDTCERGNVSMGLR 128

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP    ++  L DP  P SRLG         ++  + G   H  CE  S+      L  
Sbjct: 129 VNPEHQEAETPLYDPCAPGSRLGITAVQLQHQDLSGIEGFHIHGLCECDSYATERM-LNA 187

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240
           IE++F  +  +++W++LGGG   T  DY +      L  F  KY    + LEPG A+   
Sbjct: 188 IEQQFSAYFPKLKWLNLGGGHLMTQADYDIDHLINVLNRFKAKYPHLHVILEPGSAVAWQ 247

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----YTAMVCGRS 296
           T  L   V+DI EN   + I+D SV AH+PD L       I          YT  + G S
Sbjct: 248 TGPLIAEVVDIVENNGPIAILDISVTAHMPDVLEMPYRPMIKDAQEANVLAYTYRLGGNS 307

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CLAGD+  E+ F +P+ +G RI FED+  Y + +  +FNG+  P I +   +G  + +RE
Sbjct: 308 CLAGDMLPEYSFAEPLAVGQRIVFEDMMHYTMVKTTFFNGVQHPGIGILRQNGEFELVRE 367

Query: 357 FSYNDYYNNLS 367
           F+Y+D+   LS
Sbjct: 368 FTYDDFLARLS 378


>gi|117927014|ref|YP_867631.1| diaminopimelate decarboxylase [Magnetococcus sp. MC-1]
 gi|117610770|gb|ABK46225.1| diaminopimelate decarboxylase [Magnetococcus sp. MC-1]
          Length = 419

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 70/390 (17%), Positives = 124/390 (31%), Gaps = 24/390 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y   ++ LL++L        +    +  ++K  +   + D L +   G    S  
Sbjct: 25  VGTPFYCYSERTLLHHLQVFQQAFASQDSLICYSVKANSNLAVLDALAKQGAGFDIVSGG 84

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKD--KAQKLHK 116
           E+         GE   ++   K       A+          ++ +L + ++   A  +  
Sbjct: 85  ELERVRRVGCPGERVVFSGVGKSRAEIQAALAYGVRMFNVESIPELQRIQEVALAMDVAA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCEN 169
            + LRINP V              ++ G          +   +     V GL  H   + 
Sbjct: 145 PVTLRINPDVDPKTHPYISTGLKRNKFGIPFGEAVAVYQQAAQMSHVQVVGLDCHIGSQL 204

Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDF----CQRLKEFS 222
                F   LK +            +I+ + LGGG+    +D             L E  
Sbjct: 205 TQLSPFVDALKRVMVLIQALKGHGIEIKNLDLGGGLGIPYEDGDTPPSPAELAAALLEQL 264

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATI 281
           +   V + LEPG AIV N   L T V  + +   ++ VI D+ +   +   +       I
Sbjct: 265 DGMPVTVILEPGRAIVGNAGVLVTRVEYVKKGEQRHFVITDAGMNDLLRPAIYNAYHGVI 324

Query: 282 YPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                         V G  C  GD F    +   V  G+ ++      Y     + +N  
Sbjct: 325 PLQRKFDREEQVVDVVGPICETGDFFARDRYLSEVYQGELLAVRSAGAYGFVMSSNYNTR 384

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367
                 +   D      +  S      N S
Sbjct: 385 PRVAEVLVRGDRYAVVRKRESVAQLLENES 414


>gi|294673620|ref|YP_003574236.1| carboxynorspermidine decarboxylase [Prevotella ruminicola 23]
 gi|294474225|gb|ADE83614.1| carboxynorspermidine decarboxylase [Prevotella ruminicola 23]
          Length = 373

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 120/373 (32%), Positives = 188/373 (50%), Gaps = 13/373 (3%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP Y+I++ KL  NL     +   A ++++LA K FA W  F    +Y++ TT+SSL E 
Sbjct: 3   TPIYIIEETKLRRNLSLIAEVAAKADIEVILAFKAFALWKTFPIFREYINSTTASSLSEA 62

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
            L  E+F    H Y+ AY + E   ++     I FN++SQ  +F ++A+     +GLR+N
Sbjct: 63  RLAFEEFKAPAHTYSPAYTEEEFPEIVKCSSHITFNSLSQYERFHEQAKSAS--LGLRVN 120

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
           P  S    +L +P  P +R G       E    ++ G   H  CE+     F   L +IE
Sbjct: 121 PEYSEVSTLLYNPCAPGTRFGITADKLPEQLPADIEGFHCHTLCESG-PDVFQRTLVHIE 179

Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNTT 242
           ++F  +  Q++WI+ GGG   T KDY V+   + + +F ++Y   +I LEPG A    T 
Sbjct: 180 EKFAKWFPQLKWINFGGGHLMTRKDYDVELLIKIIHDFKKRYPWLKIILEPGSAFAWQTG 239

Query: 243 TLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT--------GPYTAMVC 293
            L + V+DI E+      + D S   H+PD L       +             P T  + 
Sbjct: 240 PLVSHVVDIVEDKGIKTAILDVSFTCHMPDCLEMPYMPEVRGAEIVEMEKATEPMTYRLG 299

Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353
           G SCL+GD  G + F+  +K+G+ I FED+  Y   +   FNGI+ P I + + +G ++ 
Sbjct: 300 GNSCLSGDFMGSWLFDHELKVGEEIIFEDMIHYTTVKTCTFNGISHPAIGMLHANGKLEI 359

Query: 354 IREFSYNDYYNNL 366
           +R F Y DY N +
Sbjct: 360 LRSFGYEDYRNRM 372


>gi|146280906|ref|YP_001171059.1| diaminopimelate decarboxylase [Pseudomonas stutzeri A1501]
 gi|145569111|gb|ABP78217.1| diaminopimelate decarboxylase [Pseudomonas stutzeri A1501]
 gi|327479175|gb|AEA82485.1| diaminopimelate decarboxylase [Pseudomonas stutzeri DSM 4166]
          Length = 415

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 64/384 (16%), Positives = 119/384 (30%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +           +     +  A+K  +  G+ + L +   G    S  E
Sbjct: 26  GTPTYVYSRAHIEAQYRAYADALEGMPHLVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117
           +              ++     +D    A+          +  +L + +  A +  +   
Sbjct: 86  LERVLAAGGEPGRIVFSGVGKTRDDMRRALEVGVHCFNVESTDELERLQQVAAELGMKAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G              E     V G+  H   +  
Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIDIDNAEAVYARAAELPNLEVVGVDCHIGSQLT 205

Query: 171 ---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224
               FL     L  +         QI  + LGGG+    +D       D+ Q +++  E 
Sbjct: 206 SLPPFLDALDRLLALIDRLATRGIQIRHLDLGGGLGVRYRDEQPPLAGDYIQAVRQRIEG 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + +  EPG +IV N   L T V  +     K+  IVD+++   +   L       I  
Sbjct: 266 RGLALVFEPGRSIVANAGLLLTRVEYLKHTAHKDFAIVDAAMNDLIRPALYQAWMNVIAV 325

Query: 284 NTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                      + G  C  GD   +      +  GD ++      Y     + +N     
Sbjct: 326 QPHEGDTRRYDIVGPICETGDFLAKDRELA-LAEGDLLAVCSAGAYGFVMSSNYNTRGRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + + D   +  R  S  + Y 
Sbjct: 385 AEVLVDGDQAFEVRRRESVQELYA 408


>gi|291545481|emb|CBL18589.1| carboxynorspermidine decarboxylase [Ruminococcus sp. SR1/5]
          Length = 405

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 128/378 (33%), Positives = 200/378 (52%), Gaps = 14/378 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           IKTP Y++D+  L+ N +    I K  G K+LLA K F+ +  +  L  Y+ GT +S LY
Sbjct: 24  IKTPCYVLDEAALIKNAELMGNIAKRTGCKMLLAQKAFSNYDCYHLLEPYLTGTEASGLY 83

Query: 62  EVMLGHEKFGG-ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           E  LG ++  G E H +   Y++ E + +LS  D I+FN+ SQL +F  + ++  K  GL
Sbjct: 84  EARLGAQEMPGKEVHVFCAGYREDEFEELLSFADHIVFNSPSQLLRFGKRVKEAGKNAGL 143

Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSFL 173
           RINP  S      + DP  P SR+G        +  K+      ++G+ FH  CE  S  
Sbjct: 144 RINPECSTQEGHAIYDPCAPGSRMGTTRAQWETAVRKHPELIGLLDGIHFHTLCEQDSSD 203

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
                L  ++ +FG  I+Q++W++LGGG H T   Y +    + ++   E++ V +YLEP
Sbjct: 204 -LETTLTAVKTKFGDLISQMKWLNLGGGHHITRPGYDIARLEKCIRAAKEEWKVDVYLEP 262

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIY----PNTGPY 288
           GEA   N     TTVLD+ +N    + + D S   H+PD L       +     P     
Sbjct: 263 GEAWALNAGFFLTTVLDVLQNGDIRLAILDGSAACHMPDVLEMPYRPPLLGADEPGENAV 322

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348
           T  + G +CL+GDI G++ F +P+K GD + F D+A Y   + N FNG+ +P I +++ D
Sbjct: 323 TIRLGGPTCLSGDIIGDYSFSEPLKYGDILMFGDMAIYTTCKNNTFNGMPLPDIWLRHGD 382

Query: 349 GTIKAIREFSYNDYYNNL 366
            T++ + +F Y D+   L
Sbjct: 383 KTMERLTDFGYEDFKGRL 400


>gi|148653513|ref|YP_001280606.1| carboxynorspermidine decarboxylase [Psychrobacter sp. PRwf-1]
 gi|148572597|gb|ABQ94656.1| carboxynorspermidine decarboxylase [Psychrobacter sp. PRwf-1]
          Length = 379

 Score =  250 bits (637), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 196/379 (51%), Positives = 249/379 (65%), Gaps = 12/379 (3%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           M+KTPYY ID   L  NL     +   +G K LLALKCFA WG+FD +  Y+ GTTSSSL
Sbjct: 1   MLKTPYYQIDIAALKQNLQIVQRLCDLSGAKALLALKCFATWGVFDEMTPYLHGTTSSSL 60

Query: 61  YEVMLGHEKFG--GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            EV LG E+FG   ETHAY+VAY   EID VL+  D IIFN+ +QL+ FKDKA+     +
Sbjct: 61  NEVRLGKEEFGEDKETHAYSVAYSADEIDEVLTYADKIIFNSFNQLHAFKDKAKAQGIPV 120

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
           GLRINP  S S FI+ADP RPFSRLGE    KI+  I ++ G+M HNNCEN SF  FS  
Sbjct: 121 GLRINPKTSNSSFIIADPARPFSRLGEHDIQKIKPVIDDITGVMIHNNCENNSFEAFSDS 180

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
           L +IE +FG    Q+EW+SLGGGIHF   DYP++   QRLK FSEKY VQ+YLEPGEA +
Sbjct: 181 LADIEAKFGELFYQLEWVSLGGGIHFIAPDYPLEKLAQRLKSFSEKYGVQVYLEPGEACI 240

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA----------TIYPNTGPY 288
            N   L TTVLD   N K L +VD+S+EAH+ D L+Y+E+A           I       
Sbjct: 241 HNAAKLVTTVLDTLHNGKPLAVVDASIEAHMLDLLIYRETAPLVQINDEACQITSQQSDD 300

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348
           + ++ G+SCLAGDIFGE+  +KP+ IGD++SF + AGY + +KNWFNG+ MP I + +  
Sbjct: 301 STIIYGKSCLAGDIFGEYALDKPLTIGDKVSFGNAAGYTMVKKNWFNGVAMPAIVICDEQ 360

Query: 349 GTIKAIREFSYNDYYNNLS 367
           G +   + F Y D+  +LS
Sbjct: 361 GELTIQKTFGYEDFKASLS 379


>gi|332829256|gb|EGK01910.1| carboxynorspermidine decarboxylase [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 380

 Score =  250 bits (637), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 126/375 (33%), Positives = 192/375 (51%), Gaps = 10/375 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P ++++++ L  NL     +++ AGV ++LA K FA W  F  + +Y+  +T+SS++
Sbjct: 7   VPSPCFVMEEELLRKNLSLIKSVKERAGVNIILAFKAFAMWKSFPIIREYIPYSTASSVF 66

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIG 119
           E  L +E+ G   H ++ AY        +     I FN++SQ  +F       +     G
Sbjct: 67  EAQLAYEEMGSLAHTFSPAYTPDNFPVFMRYSSHITFNSLSQYERFYPETLKHRKKVSCG 126

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +RINP  S  +  L +P  P SRLG       +   + V GL FH  CE+ S+      L
Sbjct: 127 IRINPEYSVVETDLYNPATPDSRLGVPVSHFGDELPEGVEGLHFHTLCESSSYD-LEKTL 185

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY-LEPGEAIV 238
           + +EK+FGHF+ +I+W+++GGG   T +DY V+     L  F  KY      +EPG A  
Sbjct: 186 EQVEKKFGHFLPKIKWLNMGGGHLMTREDYDVEHLINLLLSFKAKYPNLEITMEPGSAFA 245

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVE-AHVPDYLLYQESATIY-----PNTGPYTAMV 292
             T  L +TV+DI +N      +       H+PD L       I      P  G  T  +
Sbjct: 246 WQTGVLVSTVVDIVDNGGIKTAILDVSFACHMPDCLEMPYKPYIRGAYHEPVKGLPTYRM 305

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352
            G SCL+GD  GE+ F++P+ IGDRI FED+  Y   +   FNGI+ P IA+ N    ++
Sbjct: 306 GGSSCLSGDFIGEWSFDEPLLIGDRIIFEDMIHYTTVKTTMFNGISHPAIALWNKYNQLE 365

Query: 353 AIREFSYNDYYNNLS 367
             REF Y DY N +S
Sbjct: 366 IYREFDYEDYKNRMS 380


>gi|149376983|ref|ZP_01894737.1| diaminopimelate decarboxylase [Marinobacter algicola DG893]
 gi|149358760|gb|EDM47230.1| diaminopimelate decarboxylase [Marinobacter algicola DG893]
          Length = 416

 Score =  250 bits (637), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 57/382 (14%), Positives = 119/382 (31%), Gaps = 24/382 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +   + + L +   G    S  E
Sbjct: 26  GTPAYVYSRATLERHYRAYDDALAGRPHLVCYAVKANSNIAVLNVLARLGAGFDIVSAGE 85

Query: 63  V-MLGHEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +  +           ++   K       A+ +        + ++L++  + A +L     
Sbjct: 86  LERVIRAGGDPAKTVFSGVGKQRWEMRRALEAGVRCFNVESDTELDRLNEVAGELGVRAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    +              ++ G+  H   +  
Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIDIAEAPAVYERAAAMANLDIQGVDCHIGSQLT 205

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---KEFSEK 224
           S   F   L  +             I  + +GGG+  T            +    E    
Sbjct: 206 SVSPFLDALDRVLELIDTLAKKNINIRHLDMGGGLGVTYDQEQPPQPSDYVTALAERLGD 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATI-- 281
            S+++ +EPG +I  N   L T V  +         I D+++   +   L     + I  
Sbjct: 266 RSLELIMEPGRSIAANAGILLTRVEFLKCTEHRNFAITDAAMNDLIRPALYSAWQSIIPV 325

Query: 282 --YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
               +       + G  C  GD  G+    + ++ GD ++      Y     + +N  N 
Sbjct: 326 TPRNDGDEKHWDLVGPVCETGDFLGKDRKLR-LQAGDLLAVRSAGAYGFVMSSNYNTRNR 384

Query: 340 PTIAVKNVDGTIKAIREFSYND 361
           P   + + +      R  +  +
Sbjct: 385 PPELMVDGEQVHVVRRRETLEE 406


>gi|258648530|ref|ZP_05735999.1| carboxynorspermidine decarboxylase [Prevotella tannerae ATCC 51259]
 gi|260851301|gb|EEX71170.1| carboxynorspermidine decarboxylase [Prevotella tannerae ATCC 51259]
          Length = 382

 Score =  250 bits (637), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 128/382 (33%), Positives = 184/382 (48%), Gaps = 17/382 (4%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           M +TPYY I+++ L NNL         AGV+ +LA K FA W  F     Y+  TT+SS 
Sbjct: 1   MRETPYYRIEERLLRNNLALIRRTANEAGVEFILAFKAFALWKTFFIFRDYIAHTTASSP 60

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKI 118
            E  L  E+FG + H Y+ AY+D + D ++     I FN++ Q   F  +          
Sbjct: 61  NEARLAFEEFGSKAHTYSPAYEDKDFDTIMRCSSHITFNSLQQFEHFYPRIVENGKLISC 120

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
           GLRINP  S  +  L +P  P SR G   +   +   + V G   HN+CE+ S       
Sbjct: 121 GLRINPQYSEIETTLYNPCAPGSRFGILAEQLPDQLPEGVEGFHCHNHCES-SAAALVHT 179

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAI 237
           L++IE  FG ++  I+W++LGGG   T KDY V+     LK F  +Y    + LEPG A 
Sbjct: 180 LEHIEARFGKWLPAIKWLNLGGGHLLTRKDYDVRLLIDTLKSFKARYPQLHLILEPGSAF 239

Query: 238 VTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTGPYT------- 289
              T  L  +V+DI EN      + + S   H+PD L       I               
Sbjct: 240 AWQTGDLFASVVDIVENDGIKTAILNVSFTCHMPDCLEMPYWPAIRGAETLEPPQAAGRE 299

Query: 290 -----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344
                  + G SCL+GD  G + FE+P++IGD I F D+  Y   + N FNGI  P++ +
Sbjct: 300 REPLVYRLGGNSCLSGDFMGYWRFEQPLQIGDTIRFSDMIHYTTVKTNMFNGIPHPSLVL 359

Query: 345 KNVDGTIKAIREFSYNDYYNNL 366
              +G  + +R F Y DY + +
Sbjct: 360 LRENGEEELLRRFGYEDYRDRM 381


>gi|149186769|ref|ZP_01865080.1| carboxynorspermidine decarboxylase [Erythrobacter sp. SD-21]
 gi|148829677|gb|EDL48117.1| carboxynorspermidine decarboxylase [Erythrobacter sp. SD-21]
          Length = 392

 Score =  249 bits (636), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 115/375 (30%), Positives = 185/375 (49%), Gaps = 10/375 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P +++D  KL  N      IR  A +K+L ALK F+ W     + +Y+DG  +S L+
Sbjct: 19  VDSPAFVVDAAKLRANCQILADIRDEAEIKVLSALKAFSMWSAAPIIGEYLDGVCTSGLW 78

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-----AQKLHK 116
           E  L  E + GE   Y  AYK  E+D V    D +IFN+  Q+++         A     
Sbjct: 79  EARLASEFYDGEISTYCAAYKPEELDEVCRLSDHVIFNSPGQMSRAALILDNARASGQDF 138

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
           ++GLRINP V   +    DP+ P SRLG          ++ V G+ FHN CE        
Sbjct: 139 EVGLRINPQVPTGEVPRYDPSSPGSRLGFPLDQLTPEIMEGVEGIHFHNLCEQD-LEPLI 197

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
                +      +  Q++WI++GGG H T  DY  ++  + LK+  +    +IYLEPGEA
Sbjct: 198 QTWDRVFDAIEPWFGQLKWINMGGGHHITRADYQREELIEFLKDAKDDTGAEIYLEPGEA 257

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY---TAMVC 293
           +  +   L  T+LD   N   + I D S   H+PD +       +      +      + 
Sbjct: 258 VALDAGILVGTILDTGYNGLPVAIADVSATCHMPDVIEAPYRPAMLGEASDHETPEVRIG 317

Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-GTIK 352
           G SCLAGD+ G++      ++G R +F D A Y++ + N FNG+ +P+I + + +   ++
Sbjct: 318 GPSCLAGDVIGDYRIPGGAEVGKRFAFLDQAHYSMVKTNTFNGVQLPSIYMWDSETDQLE 377

Query: 353 AIREFSYNDYYNNLS 367
            ++EF Y+ + + LS
Sbjct: 378 LVKEFGYDTFRDRLS 392


>gi|15679335|ref|NP_276452.1| diaminopimelate decarboxylase [Methanothermobacter
           thermautotrophicus str. Delta H]
 gi|8134391|sp|O27390|DCDA_METTH RecName: Full=Diaminopimelate decarboxylase; Short=DAP
           decarboxylase
 gi|2622442|gb|AAB85813.1| diaminopimelate decarboxylase [Methanothermobacter
           thermautotrophicus str. Delta H]
          Length = 428

 Score =  249 bits (636), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 65/391 (16%), Positives = 129/391 (32%), Gaps = 30/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ID+ ++  N          + +  ++  A K      +   L +   G  + S 
Sbjct: 28  GTPLYVIDEMRIRENYRRLYRAFSGEYSRFQVFYACKANTNLAVMRILEEEGSGIDAVSP 87

Query: 61  YEVMLGH-EKFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E+       F  +   Y     +D E+   L +   I  ++ SQL +  + A +   +I
Sbjct: 88  GEIYTALMAGFDPDRILYTGNNVRDDELQFALDSGVRINVDSRSQLLRLSEIAPE-GLRI 146

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSF 172
             R+NP V              S+ G   ++  E     ++      G+  H        
Sbjct: 147 SFRVNPLVGAGHHEHCITGGEMSKFGVMEREAPEVYRMAMDLGFEPVGIHAHIGSGILDP 206

Query: 173 LCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK 224
             F   ++ +    G        + E+I  GGG+            + +F  ++    + 
Sbjct: 207 EPFMLAVETLMDIAGRVHEATGVEFEFIDFGGGLGIPYTPEEEPLDIDEFASKITGLFKD 266

Query: 225 Y-------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
                      + LEPG  IV + + L T V  I E+ +    VD+     +   +    
Sbjct: 267 KLSEYGLGRPMMCLEPGRYIVGDASYLLTRVNTIKESYRKFAGVDAGFNTLLRPAMYGSY 326

Query: 278 SATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
              +      +       V G  C +GD+F        +  GD ++  +   Y+ +  + 
Sbjct: 327 HHILVAERPLDEPSEKMDVAGNVCESGDLFARDRQLPEINEGDVLAIMNAGAYSFSMSSQ 386

Query: 334 FNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +N    P   +             +++D   
Sbjct: 387 YNSRPRPAEVLVREGKVDVVRERETFSDLLR 417


>gi|330962353|gb|EGH62613.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 415

 Score =  249 bits (636), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 60/384 (15%), Positives = 120/384 (31%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +                 +  A+K  +  G+ + L +   G    S  E
Sbjct: 26  GTPTYVYSRAHIEAQYRAYADALDGMAHLVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH--KK 117
           +          E   ++     ++    A+          +  +L + ++ A +L+    
Sbjct: 86  LERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQEVAAELNVRAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           I LR+NP V              ++ G       +  I+        V G+  H   +  
Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAEDVYIRASQLPNLEVIGVDCHIGSQLT 205

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
           +   F   L    ++    G     +  I LGGG+    +D         +K   E+ + 
Sbjct: 206 TLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGLGVRYRDEEPPLAADYIKAVRERLAG 265

Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280
           +   +  EPG  IV N   L T V  +         IVD+++   +   L        A 
Sbjct: 266 RDLGLLFEPGRFIVANAGVLLTRVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVTAV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              ++      + G  C  GD   +      +  GD ++      Y     + +N     
Sbjct: 326 RPRDSEARAYDIVGPICETGDFLAKDRELA-LAEGDLLAVHSAGAYGFVMSSNYNTRGRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + +     +  R  +  + + 
Sbjct: 385 AEVLVDGSQAFEVRRRETVAELFA 408


>gi|254492286|ref|ZP_05105460.1| diaminopimelate decarboxylase [Methylophaga thiooxidans DMS010]
 gi|224462611|gb|EEF78886.1| diaminopimelate decarboxylase [Methylophaga thiooxydans DMS010]
          Length = 416

 Score =  249 bits (636), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 69/385 (17%), Positives = 123/385 (31%), Gaps = 24/385 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         N    +  A+K  +   + + L +   G    S  E
Sbjct: 26  GTPTYVYSRATLARHWKAFDDAFSNHAHLVCYAVKANSNLAVLNVLARLGSGFDIVSAGE 85

Query: 63  -VMLGHEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
              +           ++   K+ E        N       ++ +L +  D A  L+K   
Sbjct: 86  LARVIAAGGEAAKTVFSGVGKNREEIEYALNQNIRCFNVESIPELARINDVAAMLNKVAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170
           + +R+NP V              ++ G   +D         +    NV G+  H   +  
Sbjct: 146 VSIRVNPDVDAQTHPYISTGLKENKFGIAIEDARTVYQSAKQMSNLNVVGVDCHIGSQLT 205

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEK 224
           +   F   LK +     E       I+ + +GGG+    +D       +    L+     
Sbjct: 206 TVSPFVDALKRVLTLIDELAEDGITIKHLDIGGGLGIHYRDETPPTPAEYAEALQPLLTD 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESA---- 279
             ++I LEPG AI  N   L T V  I     K   IVD+++   +   L          
Sbjct: 266 RDLEILLEPGRAIAGNAGILLTQVEFIKPTEAKQFAIVDAAMNDLLRPALYQSWQEIQPV 325

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            +  +    T  + G  C  GD  G+      +K GD ++      Y     + +N    
Sbjct: 326 MLNSDAEEATYDIVGPICETGDFLGKDRLLA-IKQGDFLAIRSAGAYGFTMSSNYNSRPR 384

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
               + + D         +    Y 
Sbjct: 385 AAEVMVDGDQVHLVRERETIESLYA 409


>gi|84684125|ref|ZP_01012027.1| Orn/DAP/Arg decarboxylase, family 2 [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84667878|gb|EAQ14346.1| Orn/DAP/Arg decarboxylase, family 2 [Rhodobacterales bacterium
           HTCC2654]
          Length = 421

 Score =  249 bits (636), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 55/390 (14%), Positives = 120/390 (30%), Gaps = 26/390 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+     L  +              +  A+K  +   +   +     G    S  
Sbjct: 25  VGTPFYVYSAATLRRHYQVFDEALAGMDHLICYAMKANSNLAVVKLMGDLGAGADVVSGG 84

Query: 62  EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116
           E          G+   ++     +D    A+ +        +  +L    + A  +    
Sbjct: 85  EYRRALAAGIPGDRIVFSGVGKTRDEMRLALENGIRQFNVESEPELLALNEVAMSMDTVA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK--IESEIKNV-----NGLMFHNNCEN 169
            + +R+NP V           +  ++ G        + +EI+ +      G+  H   + 
Sbjct: 145 PVTIRVNPDVDAKTHAKIATGKSENKFGIPIARAREVYAEIRGLPGVKAVGIDVHIGSQL 204

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221
                F A  + +            +I  + LGGG+    +           + Q ++E 
Sbjct: 205 TDLAPFRAAYEKVADLTHGLREDGHEIIRLDLGGGLGIPYETSNQAPPLPLEYGQVIRET 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280
                 +I +EPG  I  N   + ++V+ +        ++ DS++   V   +       
Sbjct: 265 VGDLGCEIEIEPGRLIAGNAGLMVSSVIYLKHGEGRDFLILDSAMNDLVRPSMYDAHHDI 324

Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +               + G  C  GD F +     P+  GD ++F     Y     + +N
Sbjct: 325 VPVIEAAPGVEQAPHDIVGPVCETGDTFAKQRNLPPLGAGDLVAFRSAGAYGAVMASEYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              +    + + D         +Y +    
Sbjct: 385 SRPLIPEVLVDGDHFAVIRARPTYEEMLAR 414


>gi|94265420|ref|ZP_01289172.1| Diaminopimelate decarboxylase [delta proteobacterium MLMS-1]
 gi|94266455|ref|ZP_01290148.1| Diaminopimelate decarboxylase [delta proteobacterium MLMS-1]
 gi|93452933|gb|EAT03438.1| Diaminopimelate decarboxylase [delta proteobacterium MLMS-1]
 gi|93454077|gb|EAT04412.1| Diaminopimelate decarboxylase [delta proteobacterium MLMS-1]
          Length = 416

 Score =  249 bits (636), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 64/384 (16%), Positives = 114/384 (29%), Gaps = 21/384 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+YL     L  +                 A+K  +   +     +   G    S  
Sbjct: 25  VGTPFYLYSAATLRRHFTAFDGAFAGLDHLSCFAVKASSNIAILRLFARLGGGADIVSGG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+          E   Y+   K       A+++        +  +L   +  A +L +  
Sbjct: 85  ELFRALKAGIAPERIVYSGVGKTRAEIRQALVAGILMFNLESAQELTAIQQCAAELGQTA 144

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCEN 169
               R+NP V              ++ G   ++ +       +     + GL  H   + 
Sbjct: 145 RVSFRVNPDVDPQTHAYISTGLAENKFGIAIEEALAVYKEARQMANVEIVGLSCHIGSQL 204

Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSE 223
                F   +  ++K           I ++ LGGG+    +     +  +    L++   
Sbjct: 205 TQVSPFVDTVDKLKKFMAELNGAGINIRYLDLGGGLGINYQGENPPEPAEYGMALRQALG 264

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES---AT 280
                + LEPG  IV N   L T VL      KN V+VD+ +       L          
Sbjct: 265 DLPCTLILEPGRVIVGNAGILVTRVLFTKSGRKNFVVVDAGMNDLARPSLYDAYHAIQPV 324

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                G   A V G  C  GD              D ++      Y     + +N     
Sbjct: 325 TRREDGQMVADVVGPICETGDFLARGREIARAVPDDLLAVMSAGAYGFTMASNYNSRPRV 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + + D  ++  R  +Y D   
Sbjct: 385 PEVLVSEDQFVEIRRRETYEDLVR 408


>gi|77163847|ref|YP_342372.1| diaminopimelate decarboxylase [Nitrosococcus oceani ATCC 19707]
 gi|254436067|ref|ZP_05049574.1| diaminopimelate decarboxylase [Nitrosococcus oceani AFC27]
 gi|76882161|gb|ABA56842.1| diaminopimelate decarboxylase [Nitrosococcus oceani ATCC 19707]
 gi|207089178|gb|EDZ66450.1| diaminopimelate decarboxylase [Nitrosococcus oceani AFC27]
          Length = 417

 Score =  249 bits (635), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 65/385 (16%), Positives = 129/385 (33%), Gaps = 24/385 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  + +         +    ++  A+K  +   + + L +   G    S+ E
Sbjct: 27  DTPCYVYSRAAIEHQWRAFDQAFEKHPHQICYAVKANSNLAVLNILARLGSGFDIVSVGE 86

Query: 63  VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +              ++   K  D    A+          + ++L +  + A KL +   
Sbjct: 87  LERVLAAGGDPGRIVFSGVGKRADEMERALAVGIACFNVESEAELIRLNEIAGKLEQRAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G +    +            ++ G+  H   +  
Sbjct: 147 VSLRVNPDVDARTHPYIATGLRDNKFGIEIDQALAVYARAATLPHIDILGVDCHIGSQLT 206

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYP---VKDFCQRLKEFSEK 224
           S   F A L+ +     +      +I  I LGGG+    +D      + +   L++    
Sbjct: 207 SLSPFLAALERVLALVDQLAERGIKIRHIDLGGGLGIIYRDEAPPSPQQYAAALRQKLAG 266

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
            +++I++EPG AIV N   L T +  + +   KN  IVD+++   +   L       I  
Sbjct: 267 RNLEIWIEPGRAIVGNGGVLLTRIEYLKQAPQKNFAIVDAAMNDLLRPALYDAWQEIIPV 326

Query: 284 ----NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                  P    V G  C  GD  G+      ++ GD +       Y     + +N    
Sbjct: 327 AVDATGEPLFFDVVGPVCETGDFLGKRRQLA-IEAGDLLVVRAAGAYGFTMSSNYNSRPR 385

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
               + +           +    Y 
Sbjct: 386 AAEIMVDGAEAHLVRERETVESLYR 410


>gi|32267006|ref|NP_861038.1| diaminopimelate decarboxylase [Helicobacter hepaticus ATCC 51449]
 gi|32263058|gb|AAP78104.1| diaminopimelate decarboxylase [Helicobacter hepaticus ATCC 51449]
          Length = 424

 Score =  249 bits (635), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 66/386 (17%), Positives = 121/386 (31%), Gaps = 29/386 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP Y+ D +++           K     +  ALK  +   +   L Q   G    S+ E
Sbjct: 14  QTPLYVYDLERITQAFCAIKDAFKARKSLICYALKANSNLSIIHHLAQLGSGADCVSIGE 73

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKAQKLHKKIG 119
           V              ++   K           D +     +  +L + +  A+KL K   
Sbjct: 74  VRRALRAGIPKYKIIFSGVGKQDNEIEEALQSDILFLNVESEEELLRIESIAKKLDKIAR 133

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCENK 170
           +  R+NP++              ++ G   +      I   N       G+ FH   +  
Sbjct: 134 ISVRVNPNIDAKTHPYISTGLNENKFGVDIEQAKSMYIFAKNAQFLEPIGIHFHIGSQIT 193

Query: 171 SFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                    + I             +++  +GGGI     D       D+ Q + E    
Sbjct: 194 DLEPIKQSAQKIAQLTHSLLALKIDLKFFDIGGGIGIRYTDESLINPYDYAQAILEALYG 253

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I  EPG  +V  +  L T VL    N  K  VIVD+++   +    LY+ +  +  
Sbjct: 254 LDLTIICEPGRFLVGESGVLLTRVLYEKHNGHKRFVIVDAAMNDLMRPA-LYRATHQVEY 312

Query: 284 NTGPYT---------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                            + G  C + D   +     P++ GD +  ++   Y  +  + +
Sbjct: 313 FLKDKRVDSSLESSLCDIVGPICESSDYLAKNIKLPPLQAGDVLVLKNAGAYGYSMASNY 372

Query: 335 NGINMPTIAVKNVDGTIKAIREFSYN 360
           N    P                 S+ 
Sbjct: 373 NTRPRPAEVALMQGNARLIKHRESFE 398


>gi|189466064|ref|ZP_03014849.1| hypothetical protein BACINT_02434 [Bacteroides intestinalis DSM
           17393]
 gi|189434328|gb|EDV03313.1| hypothetical protein BACINT_02434 [Bacteroides intestinalis DSM
           17393]
          Length = 366

 Score =  249 bits (635), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 120/367 (32%), Positives = 192/367 (52%), Gaps = 9/367 (2%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE 68
           +D++ L  NL     +   AGV+++LA K FA W  F    +Y++ +T+SS+YE  L  E
Sbjct: 1   MDEELLRKNLTLIKSVADRAGVEIILAFKSFAMWRSFPIFREYVEHSTASSVYEARLALE 60

Query: 69  KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKIGLRINPSV 126
           +FG + H Y+ AY + +   ++     I FN++SQ  +F     K       G+RINP  
Sbjct: 61  EFGSKAHTYSPAYTEADFPEIMRCSSHITFNSLSQFCRFYPAVVKEGSGISCGIRINPEY 120

Query: 127 SYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF 186
           S  +  L +P  P +R G       E+  + + G   H +CE+ S+      LK++E++F
Sbjct: 121 SEVETELYNPCAPGTRFGITADLLTETLPQGIEGFHCHCHCESSSYE-LERTLKHLEEKF 179

Query: 187 GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNTTTLN 245
            ++  QI+W++LGGG   T KDY V+     L +   ++   +I LEPG A    T  L 
Sbjct: 180 SYWFPQIKWLNLGGGHLMTRKDYDVEHLIHLLNDLRSRHPHLRIILEPGSAFTWQTGVLT 239

Query: 246 TTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT----GPYTAMVCGRSCLAG 300
           + V+DI E+      + + S   H+PD L       +        G +   + G SCL+G
Sbjct: 240 SEVVDIVESRGIRTAILNVSFTCHMPDCLEMPYQPAVCGAEMGNNGCHVYRLGGNSCLSG 299

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           D  G++ F+  ++IG+RI FED+  Y + + N FNGI+ P IA+   DG  +  R+FSY 
Sbjct: 300 DYMGDWSFDHELQIGERIVFEDMIHYTMVKTNMFNGIHHPAIAMWTKDGKAEIFRQFSYE 359

Query: 361 DYYNNLS 367
           DY + +S
Sbjct: 360 DYRDRMS 366


>gi|253702729|ref|YP_003023918.1| diaminopimelate decarboxylase [Geobacter sp. M21]
 gi|251777579|gb|ACT20160.1| diaminopimelate decarboxylase [Geobacter sp. M21]
          Length = 417

 Score =  249 bits (635), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 61/385 (15%), Positives = 119/385 (30%), Gaps = 22/385 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P Y+  K  L  +          A   +  ++K  +   +  T      G    S  
Sbjct: 25  VGSPVYIYSKATLERHYKAMDDAFAQAPHTICYSVKANSNLAVLKTFVNLGGGVDIVSGG 84

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118
           E+          +   Y+   K  E  A             +  +L++  + A ++ +K 
Sbjct: 85  ELYRALAAGVDPKKVVYSGVGKRDEEIAYALESGILMFNIESEQELDRISEVAGRIGRKA 144

Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
           G+  R+NP V              ++ G   +  +E   +        + G+  H   + 
Sbjct: 145 GIAIRVNPDVDPQTHPYITTGLKKAKFGINIERALEQYQRAKGLADIEILGIDCHIGSQL 204

Query: 170 KSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSE 223
                F   +K +++           + ++ LGGG+     D            ++E ++
Sbjct: 205 TKVSPFVDAIKKLKRLLEGVRGMGIDVRYLDLGGGLGIQYDDEAPPLPADYGSSIQEETK 264

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES---A 279
              + +  EPG  +V N   L    L   +   KN VIVD+ +       L         
Sbjct: 265 DLGLHLIFEPGRNLVGNAGILVGKCLYTKKGEEKNFVIVDAGMNDLARPALYGSFHGVRP 324

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            +    G     + G  C +GD   +       + GD I+F     Y     + +N    
Sbjct: 325 VLRNQDGVIEGDIVGPICESGDFLVKEREIPNFRQGDLIAFMSAGAYGFTMSSNYNSRPR 384

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
               + + D            D   
Sbjct: 385 AAEVMVDGDKFEVVRDREKLEDLIR 409


>gi|312963815|ref|ZP_07778286.1| Diaminopimelate decarboxylase [Pseudomonas fluorescens WH6]
 gi|311281850|gb|EFQ60460.1| Diaminopimelate decarboxylase [Pseudomonas fluorescens WH6]
          Length = 415

 Score =  249 bits (635), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 62/384 (16%), Positives = 120/384 (31%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +     +           +  A+K  +  G+ + L +   G    S  E
Sbjct: 26  GTPTYVYSRAHIEAQYRSFTDALNGIPHLVCYAVKANSNLGVLNVLARLGAGFDIVSRGE 85

Query: 63  VMLGHEKFG-GETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +       G  +   ++     +D    A+          +  +L + +  A    +   
Sbjct: 86  LERVLAAGGQADKIVFSGVGKTRDDMRRALEVGVHCFNIESTDELERLQVVAAEMGVRAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           I LR+NP V              ++ G    D  +  I+        V G+  H   +  
Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIADAEDVYIRAAQLPNLEVLGVDCHIGSQLT 205

Query: 171 SFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--- 224
           +   F   L  +       G     ++ I LGGG+    +D         ++   E+   
Sbjct: 206 TLPPFIDALDRLLALTDRLGDCGIYLQHIDLGGGVGVQYRDEEPPLIADYIQAVRERIEG 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280
             + +  EPG  IV N   L T V  +         IVD+++   +   L        A 
Sbjct: 266 RDLTLMFEPGRYIVANAGVLLTQVEYLKHTEYKDFAIVDAAMNDLIRPALYQAWMNVTAV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
               +      + G  C  GD   +      ++ GD ++      Y     + +N     
Sbjct: 326 TPRASVARAYDIVGPICETGDFLAKDRQLA-LEEGDLLAVHSAGAYGFVMSSNYNTRGRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + + D   +  R  +  + Y 
Sbjct: 385 AEVLVDGDQAFEVRRRETVAELYA 408


>gi|330998056|ref|ZP_08321884.1| carboxynorspermidine decarboxylase [Paraprevotella xylaniphila YIT
           11841]
 gi|329569145|gb|EGG50936.1| carboxynorspermidine decarboxylase [Paraprevotella xylaniphila YIT
           11841]
          Length = 396

 Score =  249 bits (635), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 130/386 (33%), Positives = 192/386 (49%), Gaps = 22/386 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+I++  L  NL+    + + AGV+++LA K FA W  F    +Y+  TT+SSLY
Sbjct: 11  VPTPCYIIEEDLLRRNLEQIRDVSRRAGVEIILAFKAFALWKSFPVFREYISHTTASSLY 70

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD-------KAQKL 114
           E  L  E+FG + H Y+ AY + + D +LS    + FN++SQ  +F            + 
Sbjct: 71  EARLAAEEFGSKAHTYSPAYTERDFDRILSYSSHVTFNSMSQYARFYPSVEEYSRLHPEE 130

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174
               GLRINP  S  +  L +P  P SR G       +S    + G   H +CE+ S   
Sbjct: 131 RVSCGLRINPEYSEIEVDLYNPCAPGSRFGMMASQLPDSLPAGIEGFHCHCHCESSS-EA 189

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEP 233
               L +IE++FG ++++++W++LGGG   T KDY V+     LK   E+Y    + LEP
Sbjct: 190 LEHTLLHIEEKFGGWLSRLKWLNLGGGHLMTRKDYDVERLVAILKGLKERYPNLTVILEP 249

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTGPYT--- 289
           G A    T  L  +V+D+ EN      + D S   H+PD L       +           
Sbjct: 250 GSAFAWQTGPLVASVVDVVENKGIRTAILDVSFTCHMPDCLEMPYQPVVRNAETMEPDAV 309

Query: 290 ---------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                      + G SCL+GD  G + F  P+  GDRI FED+  Y   + N FNGI  P
Sbjct: 310 RRAAPEENVYRLGGNSCLSGDYMGAWRFGHPLASGDRIIFEDMIHYTTVKTNMFNGIRHP 369

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNNL 366
            IA+ + DGT++  R FSY DY + +
Sbjct: 370 DIAMLHSDGTLEYYRRFSYEDYRDRM 395


>gi|260431546|ref|ZP_05785517.1| diaminopimelate decarboxylase [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260415374|gb|EEX08633.1| diaminopimelate decarboxylase [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 421

 Score =  249 bits (635), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 58/390 (14%), Positives = 120/390 (30%), Gaps = 26/390 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+     LL +              +  A+K  +   +  TL Q   G    S  
Sbjct: 25  VGTPFYIYSTATLLRHYRLFDEALAGTDHLVCYAMKAASNQAILKTLAQAGAGMDVVSGG 84

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E +        G+   ++   K  E    A+          +  ++      A +L    
Sbjct: 85  EYLRAKAAGVPGDKIVFSGVGKTAEEIRTALTGGIRQFNVESEPEMEVINAVALELGVIA 144

Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            +  R+NP V           +  ++ G       +            V G+  H   + 
Sbjct: 145 PITVRVNPDVDAKTHAKIATGKSENKFGIPIARAPQVYAHAASLPGLKVVGIDVHIGSQL 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221
                F      + +   +       I  + LGGG+               ++   +KE 
Sbjct: 205 TDLEPFRLAYSKVAELTEQLRAQGHDIRRLDLGGGLGIPYARSNEAPPLPVEYGAMIKET 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280
                 +I +EPG  I  N   + + V+ +     ++ +I+D ++   +   +       
Sbjct: 265 LGHLGCEIEIEPGRLIAGNAGLMVSKVIYVKSGEGRDFLILDGAMNDLIRPAMYDAYHDI 324

Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +               + G  C  GD F +     P++ GD ++F     Y     + +N
Sbjct: 325 VPVIEPAPGVEQRPYDIVGPVCETGDTFAKQRNMPPLRPGDLVAFRSAGAYGAVMASEYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              +    + N D         ++++  N 
Sbjct: 385 TRPLIPEVLVNGDQFAVIRERPTFDEIINR 414


>gi|330892010|gb|EGH24671.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. mori str.
           301020]
          Length = 415

 Score =  248 bits (634), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 62/384 (16%), Positives = 122/384 (31%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +                 +  A+K  +  G+ + L +   G    S  E
Sbjct: 26  GTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +          E   ++     ++    A+          +  +L + ++ A +L     
Sbjct: 86  LERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQEVAAELDVRAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           I LR+NP V              ++ G    D  +  I+        V G+  H   +  
Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIADAEDVYIRASQLPNLEVIGVDCHIGSQLT 205

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
           +   F   L    ++    G     +  I LGGG+    +D         +K   E+ + 
Sbjct: 206 TLEPFIDALARLLDLVDRLGDCGIHLHHIDLGGGLGVRYRDEEPPLAADYIKAVRERLAG 265

Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280
           +   ++ EPG  IV N   L T V  +         IVD+++   +   L        A 
Sbjct: 266 RDLGLFFEPGRFIVANAGALLTRVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVTAV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              ++ P    + G  C  GD   +      +  GD ++      Y     + +N     
Sbjct: 326 RPRDSEPCAYDIVGPICETGDFLAKGRELA-LAEGDLLAVHSAGAYGFVMSSNYNTRGRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + +     +  R  +  + + 
Sbjct: 385 AEVLVDGSQAFEVRRRETVAELFA 408


>gi|330984813|gb|EGH82916.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 415

 Score =  248 bits (634), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 62/384 (16%), Positives = 121/384 (31%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +                 +  A+K  +  G+ + L +   G    S  E
Sbjct: 26  GTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +          E   ++     ++    A+          +  +L + ++ A +L     
Sbjct: 86  LERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQEVAAELDVRAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           I LR+NP V              ++ G    D  +  I+        V G+  H   +  
Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIADAEDVYIRASQLPNLEVIGVDCHIGSQLT 205

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
           +   F   L    ++    G     +  I LGGG+    +D         +K   E+ + 
Sbjct: 206 TLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGLGVRYRDEEPPLAADYIKAVRERLAG 265

Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280
           +   +  EPG  IV N   L T V  +         IVD+++   +   L        A 
Sbjct: 266 RDLGLLFEPGRFIVANAGALLTRVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVTAV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              ++ P    + G  C  GD   +      +  GD ++      Y     + +N     
Sbjct: 326 RPRDSEPRAYDIVGPICETGDFLAKGRELA-LAEGDLLAVHSAGAYGFVMSSNYNTRGRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + +     +  R  +  + + 
Sbjct: 385 AEVLVDGSQAFEVRRRETVAELFA 408


>gi|104784267|ref|YP_610765.1| diaminopimelate decarboxylase [Pseudomonas entomophila L48]
 gi|95113254|emb|CAK17982.1| diaminopimelate decarboxylase [Pseudomonas entomophila L48]
          Length = 415

 Score =  248 bits (634), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 56/384 (14%), Positives = 116/384 (30%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +     +     +     +  A+K  +  G+ + L +   G    S  E
Sbjct: 26  GTPTYVYSRAHIEAQYRSYTDALQGVEHLVCFAVKANSNLGVLNLLARLGAGFDIVSGGE 85

Query: 63  VMLGHEKFG-GETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +       G  +   ++     ++    A+          +  +L + +  A        
Sbjct: 86  LERVLAAGGRADRVVFSGVGKTREDMRRALEVGVHCFNVESSDELERLQVVAAEMGKTAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D         +    +V G+  H   +  
Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEAIYVRAAQLPNLDVVGVDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--- 224
           +   F   L     +          +  + LGGG+    +D         ++   E+   
Sbjct: 206 TVEPFLDALDRLLVLVDRLAECGIHLRHLDLGGGVGVRYRDEQPPVLADYIQAIRERVGD 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280
             + +  EPG  IV N   L T V  +         I+D+++   +   L        A 
Sbjct: 266 RELALVFEPGRYIVANGGVLLTRVEYLKHTEHKDFAIIDAAMNDLIRPALYQAWMDVSAV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                      + G  C  GD  G+      +  GD ++      Y     + +N     
Sbjct: 326 KPREGEGRAYDLVGPICETGDFLGKDRVL-DLAEGDLLAVRSAGAYGFVMSSNYNTRGRC 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + + D   +  R  +  + + 
Sbjct: 385 AEVLVDGDQAFEVRRRETVAELFA 408


>gi|251772324|gb|EES52892.1| diaminopimelate decarboxylase [Leptospirillum ferrodiazotrophum]
          Length = 413

 Score =  248 bits (634), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 59/384 (15%), Positives = 104/384 (27%), Gaps = 22/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+  K+ L+  +             +  A+K      +   L +   G    S  E
Sbjct: 26  GSPLYIYSKKALVERIRAYREAFAAHPTLVAYAMKANGNLAILSLLAKEGAGIDVVSGGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117
           +          +   +    K  E  A             +  +L+   + A  L     
Sbjct: 86  LFRARKAGVPADKIVFAGVGKSREEIAYALKEKILMFNVESQDELDHISEVAVALGTQAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LR+NP V              S+ G   +  +    +        + G+  H   +  
Sbjct: 146 VALRVNPDVDPKTHPYISTGMKKSKFGIPVERAVAEYQRASTLPGIKIVGIHQHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC---QRLKEFSEK 224
               F            E      ++  + LGGG+    +             +    + 
Sbjct: 206 EIAPFRDAFDRLLAFHGELSRAGIKVTHLDLGGGLGIRYRSEEPPSPADLAALVLPRVKD 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQES---AT 280
             V + LEPG +IV N   L T VL          VI D+ +   +   L          
Sbjct: 266 LGVTLVLEPGRSIVGNAGILVTRVLYRKNTAVKSFVIGDAGMNDLLRPSLYGAHHDLLPV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                      + G  C  GD             GD I+      Y  +  + +N    P
Sbjct: 326 KETKGETIKGDLVGPICETGDFLATDREMPDFAAGDLIAVMSAGAYGFSMASNYNARPRP 385

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + +           S+ D   
Sbjct: 386 AEILVDGSSYRVVRDRESFEDLIR 409


>gi|332655177|ref|ZP_08420918.1| carboxynorspermidine decarboxylase [Ruminococcaceae bacterium D16]
 gi|332516037|gb|EGJ45646.1| carboxynorspermidine decarboxylase [Ruminococcaceae bacterium D16]
          Length = 404

 Score =  248 bits (634), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 119/376 (31%), Positives = 191/376 (50%), Gaps = 12/376 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+ID+++L  N      + +  G K+LLA K F+ +  +  L  Y+ GT +S LY
Sbjct: 27  LPTPAYVIDQERLRENGQVLAALSERTGCKVLLAQKAFSNYDFYPLLAPYLAGTEASGLY 86

Query: 62  EVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           E  LG E+    E H +  AY+  E + +L   D I+FN++ QL  F  K ++  K +GL
Sbjct: 87  EARLGKEEMPEKEVHVFCGAYRMDEFEELLQYADHIVFNSIHQLKAFGPKGKQAGKSLGL 146

Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKN----VNGLMFHNNCENKSFLCF 175
           RINP  S      + DP  P SR+G       +   ++    ++GL FH  CE  S    
Sbjct: 147 RINPQCSTQEGHAIYDPCAPGSRMGVTRDVWDQEMDEDTLALLDGLHFHTLCEQNSDD-L 205

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
              L  +E++FG  + Q++W+++GGG H T  DY +      ++   + + V +YLEPGE
Sbjct: 206 KTTLHAVEEKFGDILPQMKWLNMGGGHHITRPDYDLATLEACIRHAQQAWGVTVYLEPGE 265

Query: 236 AIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----YTA 290
           A+  N     + VLDI   +   + I+D+S   H+PD L       I          +  
Sbjct: 266 AVALNAGYFVSRVLDIVENSGTKIAILDASAACHMPDVLEMPYQPPILGADTQPGEGHPF 325

Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGT 350
            + G +CLAGD+ G++ FE  + +GD + F D+A Y   + N FNG+ +P +   +  G 
Sbjct: 326 RLAGPTCLAGDVVGDYSFESELHVGDLVLFGDMAIYTTCKNNTFNGMPLPDLWRLDRAGN 385

Query: 351 IKAIREFSYNDYYNNL 366
           +  + +F Y D+   L
Sbjct: 386 LTRLTQFGYQDFKMRL 401


>gi|242309007|ref|ZP_04808162.1| diaminopimelate decarboxylase dap decarboxylase [Helicobacter
           pullorum MIT 98-5489]
 gi|239524431|gb|EEQ64297.1| diaminopimelate decarboxylase dap decarboxylase [Helicobacter
           pullorum MIT 98-5489]
          Length = 400

 Score =  248 bits (634), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 68/384 (17%), Positives = 122/384 (31%), Gaps = 22/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP +  D  K+                 +  ALK  +   +   L     G    SL E
Sbjct: 8   QTPIFAYDFDKIEEYYHQFKSAFSGRKTLICYALKANSNLSVVKKLASLESGADCVSLGE 67

Query: 63  VMLG-HEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +              Y+     ++   +A+      I   + ++L K +  A+ L+ K  
Sbjct: 68  IKRAILAGIPPYKIIYSGVGKQEEEIKEAIKLGILFINIESKAELFKVESIAKNLNTKAR 127

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170
           +  R+NP +              ++ G + ++         +SE     G+ FH   +  
Sbjct: 128 ISIRVNPDIDPQTHPYISTGLKENKFGIEIQEAKSLYLHAHKSEFLEPIGIHFHIGSQLT 187

Query: 171 SFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                    + I             I++  +GGG+  T  D       D+ Q + E    
Sbjct: 188 KLQPIYESAQKIAKLVHSLLALKIDIKFFDIGGGLGITYSDETTINPYDYAQSILECLRG 247

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATI-- 281
             + I  EPG  I+ N       VL       K  VIVD ++   +   L       I  
Sbjct: 248 LDLTIICEPGRFIIGNAGVFLVKVLYEKISQNKRFVIVDGAMNDLIRPSLYNAYHQIIPL 307

Query: 282 -YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
             P      A + G  C +GD  G+     P+K GD ++      Y  +  + +N     
Sbjct: 308 TQPQGEKSPADIVGPICESGDYLGKNIELPPLKEGDVLAILSSGAYGFSMSSNYNTRPRC 367

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
                +        +  ++ D   
Sbjct: 368 AEVAISQGKIKLIRKRETFEDLIA 391


>gi|189485453|ref|YP_001956394.1| carboxynorspermidine decarboxylase [uncultured Termite group 1
           bacterium phylotype Rs-D17]
 gi|170287412|dbj|BAG13933.1| carboxynorspermidine decarboxylase [uncultured Termite group 1
           bacterium phylotype Rs-D17]
          Length = 368

 Score =  248 bits (634), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 186/366 (50%), Positives = 260/366 (71%), Gaps = 2/366 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TPYYLID++KLL NL    Y+R N+G K +LALKCF+ W +FD +++YMDGTTSSS Y
Sbjct: 5   IETPYYLIDERKLLRNLKKIKYVRDNSGAKSVLALKCFSTWAVFDLMSKYMDGTTSSSFY 64

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LGHEKFG ETHA++VAY   ++ A+ +  D IIFN+VSQLN F +     H K+GLR
Sbjct: 65  EAKLGHEKFGKETHAFSVAYSSDDVKALKNIADKIIFNSVSQLNMFYN--DIKHIKVGLR 122

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP +SYS F LADP+R +SRLG   +++I S +  ++GLMFH NCEN  F  FS ML  
Sbjct: 123 INPGISYSHFDLADPSRKYSRLGVTLEEEIMSVLDKISGLMFHYNCENDDFKSFSVMLDE 182

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I  ++   + ++EW+SLGGG++FT   YP+  FC++LK FS+K++V +YLEPGE  +  +
Sbjct: 183 IAAKYEKVLNKVEWVSLGGGLYFTKDGYPLDKFCKKLKSFSKKHNVLVYLEPGETAIIKS 242

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGD 301
             L TT+LDI +N+K++ IVD+S+EAH+ D L+Y+  A I    G    ++ GRSCLAGD
Sbjct: 243 CELITTILDIVKNVKDIAIVDASIEAHMLDLLIYRTPAEINAKDGKNEYIIAGRSCLAGD 302

Query: 302 IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361
           IFGE+     +K+G  + F + AGY + +KNWFNG+ MP+I VK +DG ++ I++F YND
Sbjct: 303 IFGEYKLADKLKVGSTVHFANAAGYTMVKKNWFNGLKMPSIVVKKLDGKMEIIKKFLYND 362

Query: 362 YYNNLS 367
           +  +LS
Sbjct: 363 FLKDLS 368


>gi|332880291|ref|ZP_08447969.1| carboxynorspermidine decarboxylase [Capnocytophaga sp. oral taxon
           329 str. F0087]
 gi|332681736|gb|EGJ54655.1| carboxynorspermidine decarboxylase [Capnocytophaga sp. oral taxon
           329 str. F0087]
          Length = 396

 Score =  248 bits (634), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 129/386 (33%), Positives = 192/386 (49%), Gaps = 22/386 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+I++  L  NL+    + + AGV+++LA K FA W  F    +Y+  TT+SSLY
Sbjct: 11  VPTPCYIIEEDLLRRNLELIRDVSRRAGVEIILAFKAFALWKSFPVFREYISHTTASSLY 70

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD-------KAQKL 114
           E  L  E+FG + H Y+ AY + + D +LS    + FN++SQ  +F            + 
Sbjct: 71  EARLAAEEFGSKAHTYSPAYTERDFDRILSCSSHVTFNSMSQYVRFYPRVEEYNRLYPEE 130

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174
               GLRINP  S  +  L +P  P SR G       +     + G   H +CE+ S   
Sbjct: 131 RVSCGLRINPEYSEIEVDLYNPCAPGSRFGMMASQLPDCLPAGIEGFHCHCHCESSS-EA 189

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEP 233
               L++IE++FG ++++++W++LGGG   T KDY V+     LK   E+Y    + LEP
Sbjct: 190 LEHTLQHIEEKFGRWLSRLKWLNLGGGHLMTRKDYDVERLVAILKGLKERYPDLTVILEP 249

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTGPYT--- 289
           G A    T  L  +V+D+ EN      + D S   H+PD L       +           
Sbjct: 250 GSAFAWQTGPLVASVVDVVENKGIRTAILDVSFTCHMPDCLEMPYQPAVRNAETVEPDAV 309

Query: 290 ---------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                      + G SCL+GD  G + F  P+  GDRI FED+  Y   + N FNGI  P
Sbjct: 310 KRATPEENVYRLGGNSCLSGDYMGAWRFGHPLAPGDRIIFEDMIHYTTVKTNMFNGIRHP 369

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNNL 366
            IA+ + DGT++  R FSY DY + +
Sbjct: 370 DIAMLHSDGTLEYYRRFSYTDYRDRM 395


>gi|83953467|ref|ZP_00962189.1| diaminopimelate decarboxylase [Sulfitobacter sp. NAS-14.1]
 gi|83842435|gb|EAP81603.1| diaminopimelate decarboxylase [Sulfitobacter sp. NAS-14.1]
          Length = 421

 Score =  248 bits (634), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 58/390 (14%), Positives = 120/390 (30%), Gaps = 26/390 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+     LL +              +  A+K  +   +  TL Q   G    S  
Sbjct: 25  VGTPFYVYSTATLLRHFKAFDDALDGMDHLVCYAMKANSNQAVLKTLAQAGAGMDVVSAG 84

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116
           E +        G+   ++   K       A+          +  ++      A+ + K  
Sbjct: 85  EYLRAKAAGVPGDKIVFSGVGKTVSEIRLALEGGIRQFNVESEPEMEVLDAVARSMGKVA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
            I +R+NP V           +  ++ G       E            V G+  H   + 
Sbjct: 145 PITIRVNPDVDAKTHAKIATGKSENKFGIPIARAREVYRMAAAMPGLEVVGIDVHIGSQL 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221
                F    + + +   +       I  + LGGG+    +          D+   +++ 
Sbjct: 205 TDLTPFELAYQKVAELTEQLRADGHTIRRLDLGGGLGIPYERSNAAPPLPTDYGAMVQKT 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESAT 280
                 +I +EPG  I  N   + + V+ +         I+D ++   +   +       
Sbjct: 265 LGHLGCEIEIEPGRLIAGNAGLMVSEVIYVKSGEGRDFLIIDGAMNDLIRPAMYEAHHDI 324

Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           I               + G  C +GD F +      +  GD ++F     Y     + +N
Sbjct: 325 IPVVEAEAGAEQQPYDIVGPVCESGDTFAKQRMMPKLVAGDLVAFRSAGAYGAVMASEYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              +    + + D      R  ++++  N 
Sbjct: 385 SRALIPEVLVHGDQFAVIRRRPTFDEMINR 414


>gi|307353001|ref|YP_003894052.1| carboxynorspermidine decarboxylase [Methanoplanus petrolearius DSM
           11571]
 gi|307156234|gb|ADN35614.1| carboxynorspermidine decarboxylase [Methanoplanus petrolearius DSM
           11571]
          Length = 392

 Score =  248 bits (633), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 139/372 (37%), Positives = 205/372 (55%), Gaps = 8/372 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           IKTP YL+D   L +N +    + K +G K LLALK FAAW +F  +++Y  GT SSSL 
Sbjct: 21  IKTPCYLLDLSALKSNGEIISEVAKESGGKALLALKAFAAWPVFPEISKYYSGTCSSSLD 80

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIG 119
           E  LG E+FGGE HA++ AYKDCEI+  +  C  + FN++SQ  + K      +     G
Sbjct: 81  ETRLGFEEFGGEVHAFSPAYKDCEIEEYIRMCSHLSFNSLSQWERHKRTILDSEKKVSCG 140

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           LR+NP     +  + +P RP SRLG +  +    + + + GL FH  CEN         L
Sbjct: 141 LRVNPEHCEVETAIYNPCRPGSRLGIRAGELENFDFEGIEGLHFHALCENN-ADALERTL 199

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
              E+ F  ++  ++W++ GGG H T KDY        +KEF +K+  ++Y+EPGEA   
Sbjct: 200 DAFEERFASYLDGMKWVNFGGGHHITRKDYDTGLLIDLIKEFRKKWGCEVYIEPGEACAL 259

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGR 295
           N   L + V+DI +N   + IVD+S  AH+PD L       I     P    YT  + G 
Sbjct: 260 NAGWLISEVVDIKDNDGMIAIVDASATAHMPDVLEMPYRPYIVGSAKPGKKKYTYRLGGP 319

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN-VDGTIKAI 354
           SCL+GD  G + F+  +K GD+++F D+A Y + +   FNGI +P I + +    +I+ +
Sbjct: 320 SCLSGDDIGTYSFDCELKPGDKLAFTDMAHYTMVKNTTFNGIRLPDILLWDPEKDSIEVL 379

Query: 355 REFSYNDYYNNL 366
           R F Y D+ + L
Sbjct: 380 RTFGYEDFRSRL 391


>gi|126740531|ref|ZP_01756218.1| diaminopimelate decarboxylase [Roseobacter sp. SK209-2-6]
 gi|126718332|gb|EBA15047.1| diaminopimelate decarboxylase [Roseobacter sp. SK209-2-6]
          Length = 421

 Score =  248 bits (633), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 62/390 (15%), Positives = 120/390 (30%), Gaps = 26/390 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+     LL +        +     +  A+K  +   +  TL Q   G    S  
Sbjct: 25  VGTPFYVYSTATLLRHFRLFDEALEGTEHLVCYAMKAASNQAILKTLAQAGAGMDVVSQG 84

Query: 62  EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E +        G+   ++      +    A+          +  ++      A +L    
Sbjct: 85  EYLRAKAAGVPGDRIVFSGVGKTMEEVRVALSGGIRQFNVESEPEMAVINAVALELGVIA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
            I +RINP V           +  ++ G       E            V G+  H   + 
Sbjct: 145 PITIRINPDVDAKTHAKIATGKSENKFGIPISRAKEVYAHAASLPGLEVVGIDCHIGSQL 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221
                F    + + +           I  + LGGG+    +          ++ Q +K+ 
Sbjct: 205 TDLEPFRLAYEKVAELTEVLRAEGHDIRRLDLGGGLGIPYERSNEAPPLPVEYGQLIKDT 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESAT 280
                 +I +EPG  I  N   + + V+ +         IVD ++   +   +       
Sbjct: 265 LGHLGCEIEIEPGRLIAGNAGLMVSKVIYVKSGEGRDFLIVDGAMNDLIRPAMYEAHHDI 324

Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +  +            + G  C  GD F +     P+  GD I+F     Y     + +N
Sbjct: 325 VAVDEPAPGVEQQPYDIVGPVCETGDTFAKERMMPPLAAGDLIAFRSAGAYGAVMASEYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              +    + + D      R   Y++  N 
Sbjct: 385 SRPLIPEVLVHGDQFAVIRRRPDYDEMINR 414


>gi|85859277|ref|YP_461479.1| diaminopimelate decarboxylase [Syntrophus aciditrophicus SB]
 gi|85722368|gb|ABC77311.1| diaminopimelate decarboxylase [Syntrophus aciditrophicus SB]
          Length = 427

 Score =  248 bits (633), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 71/385 (18%), Positives = 113/385 (29%), Gaps = 22/385 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+YL     L N+              +  A+K  +   +   L     G    S  
Sbjct: 25  VGTPFYLYSHATLRNHFRVFAEAFAKVPSIICFAVKANSNLAVLRVLIAEGGGVDIVSGG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118
           E+              Y+   K  +                ++ +L      AQ L    
Sbjct: 85  ELYRALQAGVEPGKVVYSGVGKRVDEIEYALRSGILMFNVESLQELEVINRCAQNLGVSA 144

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCEN 169
           G  LR+NP V              ++ G   +            +  ++ G+  H   + 
Sbjct: 145 GIALRVNPDVDPKTHPHISTGLKENKFGIDIERSLETYRHARSLQHLDIRGVSCHIGSQV 204

Query: 170 KSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE--- 223
                F   L+    +  +       I ++ LGGG+  T          +  K   E   
Sbjct: 205 TRLSPFLEALERLSLLVHQLKREDFDIRYVDLGGGLGITYNQEMPPHPSEYAKAILETSR 264

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQES---A 279
                   EPG  IV N   L T VL     + KN +IVD+ +   V   L         
Sbjct: 265 DLDCTFIFEPGRVIVGNAGILVTRVLYTKSNDNKNFIIVDAGMNDLVRPSLYNSFHAIRP 324

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            I  N     A V G  C +GD   +    K    GD ++      Y     + +N    
Sbjct: 325 VIEENRKEIIADVVGPICESGDYLAKARKLKDFHRGDLLAVFSAGAYGFTMASNYNSRPR 384

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
               +   D      R  +Y D  +
Sbjct: 385 IPEIMVREDQYYVVRRRETYADLIS 409


>gi|260591034|ref|ZP_05856492.1| carboxynorspermidine decarboxylase [Prevotella veroralis F0319]
 gi|260536899|gb|EEX19516.1| carboxynorspermidine decarboxylase [Prevotella veroralis F0319]
          Length = 388

 Score =  248 bits (633), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 123/375 (32%), Positives = 197/375 (52%), Gaps = 14/375 (3%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y++++++L  NL     + K A V+++LA K +A W  F    +Y+  TT+SSLYE  
Sbjct: 14  PMYILEEERLRKNLQLIASVAKEADVEIILAFKAYALWRTFPIFREYIHATTASSLYEAR 73

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ--KLHKKIGLRI 122
           LG E+FG  TH ++  Y D EID +      ++FN++SQ  ++  +A+        GLR+
Sbjct: 74  LGFEEFGAPTHTFSPGYTDYEIDDIARCSSHLVFNSLSQFERYHVRAKLENTRLSFGLRV 133

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           NP  S  + ++ +P  P +R G        +  + V+G   H +CE+ S   F   L++I
Sbjct: 134 NPEYSEVETLIYNPCAPGTRFGITSSKLPATLPEGVDGFHIHCHCESGS-DVFERTLEHI 192

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNT 241
           E +F ++  Q++W++ GGG   T KDY V      LKEF ++Y   ++ LEPG A    T
Sbjct: 193 EAKFANWFPQLKWVNFGGGHLMTRKDYDVPRLIHALKEFKKRYPWLKVILEPGSAFAWQT 252

Query: 242 TTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT---------GPYTAM 291
             L   VLD+ E+      + + S   H+PD L       +             G  T  
Sbjct: 253 GPLVAQVLDVVEDHGIKTAILNVSFTCHMPDCLEMPYHPAVRNAELVDEDGSAEGENTYR 312

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
           +   SCL+GD  G + F+ P++IG+ I FED+  Y   + N FNGI+ P IA+ + D  +
Sbjct: 313 LGANSCLSGDWMGSWRFDHPLQIGENIIFEDMLHYTTVKTNMFNGISHPAIALLHPDNEL 372

Query: 352 KAIREFSYNDYYNNL 366
           + +REF+Y DY + +
Sbjct: 373 EVLREFTYEDYRDRM 387


>gi|71738109|ref|YP_277093.1| diaminopimelate decarboxylase [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|257482608|ref|ZP_05636649.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|289624630|ref|ZP_06457584.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. aesculi
           str. NCPPB3681]
 gi|289651144|ref|ZP_06482487.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. aesculi
           str. 2250]
 gi|71558662|gb|AAZ37873.1| diaminopimelate decarboxylase [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|320326562|gb|EFW82613.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|320331372|gb|EFW87313.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330870014|gb|EGH04723.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. aesculi
           str. 0893_23]
 gi|330881320|gb|EGH15469.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|331012751|gb|EGH92807.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 415

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 62/384 (16%), Positives = 120/384 (31%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +                 +  A+K  +  G+ + L +   G    S  E
Sbjct: 26  GTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +          E   ++     ++    A+          +  +L + ++ A +L     
Sbjct: 86  LERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQEVAAELDVRAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           I LR+NP V              ++ G    D  +  I+        V G+  H   +  
Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIADAEDVYIRASQLPNLEVIGVDCHIGSQLT 205

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
           +   F   L    ++    G     +  I LGGG+    +D         +K   E+ + 
Sbjct: 206 TLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGLGVRYRDEEPPLAADYIKAVRERLAG 265

Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280
           +   +  EPG  IV N   L T V  +         IVD+++   +   L        A 
Sbjct: 266 RDLGLLFEPGRFIVANAGALLTRVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVTAV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              +  P    + G  C  GD   +      +  GD ++      Y     + +N     
Sbjct: 326 RPRDGEPRAYDIVGPICETGDFLAKGRELA-LAEGDLLAVHSAGAYGFVMSSNYNTRGRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + +     +  R  +  + + 
Sbjct: 385 AEVLVDGSQAFEVRRRETVAELFA 408


>gi|259415035|ref|ZP_05738957.1| diaminopimelate decarboxylase [Silicibacter sp. TrichCH4B]
 gi|259348945|gb|EEW60699.1| diaminopimelate decarboxylase [Silicibacter sp. TrichCH4B]
          Length = 421

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 58/390 (14%), Positives = 121/390 (31%), Gaps = 26/390 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+     LL +        +     +  A+K  +   +  TL     G    S  
Sbjct: 25  VGTPFYVYSTATLLRHFRLFDEALEGTDHLVCYAMKAASNQAILKTLAAAGAGMDVVSEG 84

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E          G+   ++   K  +                +  ++      A +L    
Sbjct: 85  EYRRAKAAGVPGDKIVFSGVGKTADEIRCALSGGIRQFNVESEPEMEVINAVALELGTTA 144

Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
            +  R+NP V           +  ++ G       E            V G+  H   + 
Sbjct: 145 PITVRVNPDVDAKTHAKIATGKSENKFGIPIARAREVYAHAASLPGLEVIGIDVHIGSQL 204

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221
                F    + +    +        I  + LGGG+               ++ Q +KE 
Sbjct: 205 TELAPFRLAYQKVAELTQALRDDGHDIRRLDLGGGLGIPYTRSNEAPPLPVEYGQMIKEE 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280
                 +I +EPG  +  N   + + V+ + E   ++ +I+D ++   +   +       
Sbjct: 265 LGHLGCEIEIEPGRLVAGNAGVMVSKVIYVKEGEGRDFLILDGAMNDLIRPAMYEAYHDI 324

Query: 281 IYPNT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           I          P    + G  C +GD F +     P+  GD ++F     Y     + +N
Sbjct: 325 IPVVEPTPGLEPKPYDIVGPVCESGDTFAKQRQMPPLGAGDLVAFRSAGAYGAVMASEYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              +    + + D      +  ++++  N 
Sbjct: 385 SRPLIPEVLVHGDQFAVIRQRPTFDEMINR 414


>gi|302189433|ref|ZP_07266106.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. syringae
           642]
          Length = 415

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 62/384 (16%), Positives = 122/384 (31%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +                 +  A+K  +  G+ + L +   G    S  E
Sbjct: 26  GTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH--KK 117
           +          E   ++     ++    A+          +  +L + ++ A +L+    
Sbjct: 86  LERVLAAGGKAERIVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQEVAAELNVRAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           I LR+NP V              ++ G       +  I+        V G+  H   +  
Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAEDVYIRASQLPNLEVIGVDCHIGSQLT 205

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
           +   F   L    ++    G     +  I LGGG+    +D         +K   E+ + 
Sbjct: 206 TLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGLGVRYRDEEPPLAADYIKAVRERLAG 265

Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280
           +   +  EPG  IV N  TL T V  +         IVD+++   +   L        A 
Sbjct: 266 RDLGLLFEPGRFIVANAGTLLTRVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMEVTAV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              ++ P    + G  C  GD   +      +  GD ++      Y     + +N     
Sbjct: 326 RPRDSEPRAYDIVGPICETGDFLAKGRELA-LAEGDLLAVHSAGAYGFVMSSNYNTRGRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + +     +  R  +  + + 
Sbjct: 385 AEVLVDGSQAFEVRRRETVAELFA 408


>gi|300021574|ref|YP_003754185.1| diaminopimelate decarboxylase [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299523395|gb|ADJ21864.1| diaminopimelate decarboxylase [Hyphomicrobium denitrificans ATCC
           51888]
          Length = 423

 Score =  248 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 64/388 (16%), Positives = 118/388 (30%), Gaps = 26/388 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+     L  +        ++    +  A+K  +   +  T+ +   G    S  
Sbjct: 25  VGTPFYVYSTATLERHYKVLAEAFRDQKALICFAVKANSNQAVLATMARLGAGMDVVSEG 84

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF----KDKAQKLHK 116
           E+              +    K     A       + FN  S+           A     
Sbjct: 85  ELRRARAAGVPASKIIFAGVGKTRGEMAYALEEGILGFNVESEPELLALSEVATALGKTA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            I +R+NP V           +  ++ G   +D  E   +        ++G+  H   + 
Sbjct: 145 SIAIRVNPDVDAKTHAKISTGKAENKFGVPFEDARELYARAATLPGLKISGIHMHIGSQI 204

Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-----DYPVKDFCQRLKEF 221
                F      +            ++E + +GGG+    +          ++   +K  
Sbjct: 205 TDLAPFRDAFALLHDLARDLIADGIRLEHLDIGGGLGVPYRGANDIPPTPDEYAAVVKAA 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                ++I LEPG  IV N   L T V  + E   K   IVD+++   +   L       
Sbjct: 265 LGDLGLKIVLEPGRMIVGNAGLLVTRVTYVKEGEDKTFTIVDAAMNDLIRPTLYEAYHEI 324

Query: 281 IYPNT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                      P    + G  C  GD   E     P + GD ++      Y     + +N
Sbjct: 325 WPVAEQRNDMAPVQQDIVGPVCETGDFLAEDRALPPSEPGDLLAVMTAGAYGAVMSSTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY 363
              +    + + D         SY+D  
Sbjct: 385 TRLLVPEVLVSGDRYAVVRPRPSYDDLI 412


>gi|303248021|ref|ZP_07334287.1| diaminopimelate decarboxylase [Desulfovibrio fructosovorans JJ]
 gi|302490578|gb|EFL50483.1| diaminopimelate decarboxylase [Desulfovibrio fructosovorans JJ]
          Length = 412

 Score =  248 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 65/384 (16%), Positives = 114/384 (29%), Gaps = 22/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+     L  +                 ++K  +   +  TL     G    S  E
Sbjct: 26  GTPLYIYSAATLRRHFAAFDSAFDGLPHLTCFSVKANSNLAVLRTLGAMGAGVDIVSGGE 85

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117
           +              Y+   K         N         ++ +L +    A +L  +  
Sbjct: 86  LYRALAAGIDPAKIVYSGVGKRGNEIEEALNAGILMFNVESMGELERISRIAARLGKNAN 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCENK 170
           + LRINP+V              ++ G   +  + +  + +        G+  H   +  
Sbjct: 146 VSLRINPNVDPKTHPYISTGLKKNKFGLDMETSLAAYARAMELPGVTPVGIDCHIGSQLT 205

Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQ---RLKEFSEK 224
           S   F   L  I               ++ LGGG+     +       +    L +    
Sbjct: 206 SIEPFLEALDKILIFREKLVAMGISPRYLDLGGGLGIQYNEEEPPHPREFGQALTKALGD 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + + LEPG  IV N   L T V+   +   K+ VIVD+++   +   L     A    
Sbjct: 266 LPLTLVLEPGRVIVGNAGILVTEVVYTKKTPSKDFVIVDAAMNDLIRPSLYDSYHAISEV 325

Query: 284 NTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                      V G  C +GD          V  G+ ++      Y     + +N     
Sbjct: 326 RPAERDTLNVDVVGPICESGDFLARDRELPAVAPGEYLAVYSAGAYGFTMSSNYNSRPRA 385

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + + D    A R  +Y D   
Sbjct: 386 AEVLVDGDTVTLARRRETYEDLVA 409


>gi|99078471|ref|YP_611729.1| diaminopimelate decarboxylase [Ruegeria sp. TM1040]
 gi|99035609|gb|ABF62467.1| diaminopimelate decarboxylase [Ruegeria sp. TM1040]
          Length = 421

 Score =  248 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 60/390 (15%), Positives = 123/390 (31%), Gaps = 26/390 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+     LL +        +     +  A+K  +   +  TL     G    S  
Sbjct: 25  VGTPFYVYSTATLLRHFRLFDEALEGTDHLVCYAMKAASNQAILKTLAAAGAGMDVVSEG 84

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E          G+   ++   K  E    A+          +  +++     A +L    
Sbjct: 85  EYRRAKAAGVPGDKIVFSGVGKTAEEIRTALTGGIRQFNVESEPEMDVINAVALELGVTA 144

Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
            +  R+NP V           +  ++ G                    V G+  H   + 
Sbjct: 145 PITVRVNPDVDAKTHAKIATGKSENKFGIPIAKARAVYAHAASLPGLEVIGIDVHIGSQL 204

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221
                F    + +    +        I  + LGGG+               ++ Q +KE 
Sbjct: 205 TDLEPFRLAYQKVAELTQALRADGHDIRRLDLGGGLGIPYTRSNEAPPLPVEYGQMIKEE 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280
                 +I +EPG  +  N   + + V+ I E   ++ +I+D ++   +   +       
Sbjct: 265 LGHLGCEIEIEPGRLVAGNAGLMVSKVIYIKEGEGRDFLILDGAMNDLIRPAMYEAHHDI 324

Query: 281 IYPNT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           I          P    + G  C +GD F +     P+  GD ++F     Y     + +N
Sbjct: 325 IPVVEPTPGLEPQPYDIVGPVCESGDTFAKQRLMPPLAAGDLVAFRSAGAYGAVMSSEYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              +    + + D      +  ++++  N 
Sbjct: 385 SRPLIPEVLVHGDQFAVIRQRPTFDEMINR 414


>gi|229593312|ref|YP_002875431.1| diaminopimelate decarboxylase [Pseudomonas fluorescens SBW25]
 gi|229365178|emb|CAY53443.1| diaminopimelate decarboxylase [Pseudomonas fluorescens SBW25]
          Length = 415

 Score =  248 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 62/384 (16%), Positives = 119/384 (30%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +     +           +  A+K  +  G+ + L +   G    S  E
Sbjct: 26  GTPTYVYSRAHIEAQYRSFTDALDGVPHLVCYAVKANSNLGVLNVLARLGAGFDIVSRGE 85

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +          +   ++     ++    A+          +  +L + +  A    +   
Sbjct: 86  LERVLAAGGKADKIVFSGVGKTREDMRRALEVGVHCFNIESTDELERLQGVAAEMGVRAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           I LR+NP V              ++ G    D  +  I+        V G+  H   +  
Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIADAEDVYIRAAQLPNLEVLGVDCHIGSQLT 205

Query: 171 ---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--- 224
               FL     L  +    G     +  I LGGG+    +D         ++   E+   
Sbjct: 206 SLPPFLDALDRLLALIDRLGECGIYLHHIDLGGGVGVRYRDEEPPLIADYIQAVRERIEG 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280
             + +  EPG  IV N   L T V  +         IVD+++   +   L        A 
Sbjct: 266 RDLTLMFEPGRYIVANAGVLLTQVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMNVTAV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              N+      + G  C  GD   +      ++ GD ++      Y     + +N     
Sbjct: 326 TPRNSEARAYDIVGPICETGDFLAKDRQLA-LEEGDLLAVHSAGAYGFVMSSNYNTRGRT 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + + D   +  R  +  + Y 
Sbjct: 385 AEVLVDGDQAFEVRRRETVAELYA 408


>gi|313501204|gb|ADR62570.1| LysA_2 [Pseudomonas putida BIRD-1]
          Length = 415

 Score =  248 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 60/384 (15%), Positives = 119/384 (30%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +     +     +     +  A+K  +  G+ + L +   G    S  E
Sbjct: 26  GTPTYVYSRAHIEAQYRSYADALQGTEHLVCFAVKANSNLGVLNVLARLGAGFDIVSGGE 85

Query: 63  VMLGHEKFG-GETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +       G  +   ++     ++    A+          +  +L + +  A ++ K   
Sbjct: 86  LERVLAAGGRADRVVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQVVAAEMGKVAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D         +     V G+  H   +  
Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEAIYVRAAQLPNLEVVGVDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE---K 224
           +   F   L     +          +  + LGGG+    +D         +K   E   +
Sbjct: 206 TVEPFLDALDRLLVLVDRLAECGIHLRHLDLGGGVGVRYRDEQPPQVADYIKAIRERVGE 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280
             + +  EPG  IV N   L T V  +         I+D+++   +   L        A 
Sbjct: 266 RDLALVFEPGRYIVANAGVLLTRVEYLKHTEHKDFAIIDAAMNDLIRPALYQAWMGVSAV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                      + G  C  GD  G+      +  GD ++ E    Y     + +N     
Sbjct: 326 KPRAGEGRAYDLVGPICETGDFLGKDRVL-NLAEGDLLAVESAGAYGFVMSSNYNTRGRC 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + + D   +  R  +  + Y 
Sbjct: 385 AEILVDGDQAFEVRRRETVAELYA 408


>gi|90019887|ref|YP_525714.1| diaminopimelate decarboxylase [Saccharophagus degradans 2-40]
 gi|89949487|gb|ABD79502.1| diaminopimelate decarboxylase [Saccharophagus degradans 2-40]
          Length = 414

 Score =  248 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 59/385 (15%), Positives = 113/385 (29%), Gaps = 23/385 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+  K               N    +  A+K  +   +   L +   G    S  
Sbjct: 25  LGTPCYVYSKAAFTRAYQDYANALGNHPGMVCYAVKANSNIAVLQVLAKLGAGFDIVSSG 84

Query: 62  EVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E+              ++     ++   +A+          + ++L +  D A +L    
Sbjct: 85  ELRRVLKAGGQPNRIIFSGVGKTREEMREALEVGIACFNVESEAELERLADVAAELGVVA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            I LR+NP V              ++ G   +       +        V G+  H   + 
Sbjct: 145 SISLRVNPDVDAKTHPYISTGLKENKFGIDIQRAPAVYARASELASLKVVGVDCHIGSQL 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSE 223
                F   L  + +           IE + +GGG+  T +D            +K    
Sbjct: 205 TELTPFLDALDRLLQLVDTLAETGITIEHLDIGGGLGVTYRDEVPPAVADYLTQIKAKLG 264

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279
              + I +EPG +I  N   + T V  +         I+D ++  ++   L         
Sbjct: 265 DRKLAIIMEPGRSIAANAGVMLTEVEFLKPTEHKNFAIIDGAMNDNIRPALYQAWQDVKP 324

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       + G  C  GD   +      ++ GDR++      Y     + +N    
Sbjct: 325 LSQREGETQQWDLVGPVCETGDFLAKDRALA-LQAGDRLALMSSGAYGFVMSSNYNTRGR 383

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
               + + D         S+ D   
Sbjct: 384 AAEVLVDGDKYFVVRERESFEDLIR 408


>gi|302670560|ref|YP_003830520.1| carboxynorspermidine decarboxylase NspC [Butyrivibrio
           proteoclasticus B316]
 gi|302395033|gb|ADL33938.1| carboxynorspermidine decarboxylase NspC [Butyrivibrio
           proteoclasticus B316]
          Length = 408

 Score =  248 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 133/404 (32%), Positives = 216/404 (53%), Gaps = 40/404 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           IKTP Y+ID++KL  NL+    +++ +G ++LLA K ++ +  +  + +Y+ G T+S L+
Sbjct: 6   IKTPAYVIDEKKLKENLEILDRVQRESGARILLAQKAYSVYQTYPLIARYLTGATASGLF 65

Query: 62  EVMLGHEKFG----------GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA 111
           E  L HE+             E H Y  A++D E++ + + CD I+FN+++QL   +   
Sbjct: 66  EARLAHEEMKLSEQDDHEKKIENHVYEPAFEDDEMEELCNICDHIVFNSLNQLEHHRKTW 125

Query: 112 QKLHKK----IGLRINPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNN 166
           +   +     +GLRINP  S  +   + DP    SRLG K  D  +   + V G+ FH  
Sbjct: 126 ESAVRDGRVSVGLRINPEFSTQEEHEIYDPCSEGSRLGIKLADMPDELPEGVEGIHFHTL 185

Query: 167 CENKSFLCFSAMLKNIEKEFGHF-------------------ITQIEWISLGGGIHFTDK 207
           CE   F        ++E+ FG F                     +I+WI+LGGG H T +
Sbjct: 186 CEQD-FEPLKQTFHHVEENFGKFFPTKDHTDESANDNNEHGSGRKIKWINLGGGHHITRE 244

Query: 208 DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVE 266
           DY V      +K+  +KY +++YLEPGEAI  +   L TT++DI +  +  V++ D+S  
Sbjct: 245 DYNVDGLITFIKDIKKKYDIEVYLEPGEAIALDAGYLVTTIMDIVKTERMPVLILDTSAA 304

Query: 267 AHVPDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFED 322
            H+PD L       +  +  P    +   +  R+CLAGDI G++ F+  + IGDR+ FED
Sbjct: 305 CHMPDVLEMPYRPPLRDSEQPGELEFNYRLSSRTCLAGDIIGDYSFDHELHIGDRLVFED 364

Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366
           +A Y++ + N FNG+ +P I + + +G I  IR+F Y+D+ N L
Sbjct: 365 MAIYSMVKNNTFNGMPLPDIDIMHENGKIDVIRKFGYDDFKNRL 408


>gi|159045599|ref|YP_001534393.1| diaminopimelate decarboxylase [Dinoroseobacter shibae DFL 12]
 gi|157913359|gb|ABV94792.1| diaminopimelate decarboxylase [Dinoroseobacter shibae DFL 12]
          Length = 431

 Score =  248 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 56/390 (14%), Positives = 118/390 (30%), Gaps = 26/390 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+     L  +              +  A+K  +   +   L     G    S  
Sbjct: 25  VGTPFYVYSTATLTRHFKLFDEALSWGPHLVCFAMKSNSNQAILKLLADLGAGMDVVSGG 84

Query: 62  EVMLGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHK 116
           E          G+   ++   K  D    A+          +  ++ +    AQ   +  
Sbjct: 85  EYARARAAGVPGDRIVFSGVGKTADEMRMALTGGIRQFNVESEPEMQRLSAVAQGLGMQA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCEN 169
            I +R+NP V           +  ++ G                    V G+  H   + 
Sbjct: 145 PITIRVNPDVDAKTHEKIATGKSENKFGIPISRAREVYAQAARLPGIKVIGIDVHIGSQL 204

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221
                F      +    +       +I  + LGGG+               D+   ++  
Sbjct: 205 TELEPFELAYAKVAELTRHLRADGHEITRLDLGGGLGIPYARTNEAPPLPTDYGALIQRT 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                 +I +EPG  I  N   L + V+ + +   +  +I+D+++   +   +       
Sbjct: 265 VGDLGCEIEIEPGRLISGNAGLLVSEVIYVKQGEDRQFLILDAAMNDLIRPSMYGAYHDI 324

Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +               + G  C +GD F +     P+  GD ++F     Y     + +N
Sbjct: 325 VPVREAAPGTPTTPYDIVGPVCESGDTFAKSREMVPLTEGDLVAFRSAGAYGAVMASEYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              +    + + D      +  S+++  N 
Sbjct: 385 TRPLIPEVLVHGDQFAVIRQRPSFDEIINR 414


>gi|26991903|ref|NP_747328.1| diaminopimelate decarboxylase [Pseudomonas putida KT2440]
 gi|24987026|gb|AAN70792.1|AE016723_4 diaminopimelate decarboxylase [Pseudomonas putida KT2440]
          Length = 415

 Score =  248 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 60/384 (15%), Positives = 119/384 (30%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +     +     +     +  A+K  +  G+ + L +   G    S  E
Sbjct: 26  GTPTYVYSRAHIEAQYRSYADALQGTEHLVCFAVKANSNLGVLNVLARLGAGFDIVSGGE 85

Query: 63  VMLGHEKFG-GETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +       G  +   ++     ++    A+          +  +L + +  A ++ K   
Sbjct: 86  LERVLAAGGRADRVVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQVVAAEMGKVAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D         +     V G+  H   +  
Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEAIYVRAAQLPNLEVVGVDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE---K 224
           +   F   L     +          +  + LGGG+    +D         +K   E   +
Sbjct: 206 TVEPFLDALDRLLVLVDRLAECGIHLRHLDLGGGVGVRYRDEQPPRVADYIKAIRERVGE 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280
             + +  EPG  IV N   L T V  +         I+D+++   +   L        A 
Sbjct: 266 RDLALVFEPGRYIVANAGVLLTRVEYLKHTEHKDFAIIDAAMNDLIRPALYQAWMGVSAV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                      + G  C  GD  G+      +  GD ++ E    Y     + +N     
Sbjct: 326 KPRAGEGRAYDLVGPICETGDFLGKDRVL-NLAEGDLLAVESAGAYGFVMSSNYNTRGRC 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + + D   +  R  +  + Y 
Sbjct: 385 AEILVDGDQAFEVRRRETVAELYA 408


>gi|325271631|ref|ZP_08138133.1| diaminopimelate decarboxylase [Pseudomonas sp. TJI-51]
 gi|324103235|gb|EGC00580.1| diaminopimelate decarboxylase [Pseudomonas sp. TJI-51]
          Length = 415

 Score =  248 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 61/384 (15%), Positives = 120/384 (31%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +     +     + A   +  A+K  +  G+ + L +   G    S  E
Sbjct: 26  GTPTYVYSRAHIEAQYRSYTDALQGAEHLVCFAVKANSNLGVLNVLARLGAGFDIVSGGE 85

Query: 63  VMLGHEKFG-GETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +       G  +   ++     ++    A+          +  +L + +  A ++ K   
Sbjct: 86  LERVLAAGGRADRVVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQVVAAEMGKVAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D         +     V G+  H   +  
Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEAIYVRAAQLPNLEVVGVDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--- 224
           +   F   L     +          +  + LGGG+    +D         +K   E+   
Sbjct: 206 TIDPFLDALDRLLVLVDRLAECGIHLRHLDLGGGVGVRYRDEQPPLVADYIKAIRERVGD 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280
             + +  EPG  IV N   L T V  +         I+D+++   +   L        A 
Sbjct: 266 RDLALVFEPGRYIVANAGVLLTRVEYLKHTEHKDFAIIDAAMNDLIRPALYQAWMGVSAV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                      + G  C  GD  G+      +  GD ++ E    Y     + +N     
Sbjct: 326 KPRGGEGRAYDLVGPICETGDFLGKDRVL-DLAEGDLLAVESAGAYGFVMSSNYNTRGRC 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + + D   +  R  +  + Y 
Sbjct: 385 AEILVDGDQAFEVRRRETIAELYA 408


>gi|283850737|ref|ZP_06368024.1| diaminopimelate decarboxylase [Desulfovibrio sp. FW1012B]
 gi|283573980|gb|EFC21953.1| diaminopimelate decarboxylase [Desulfovibrio sp. FW1012B]
          Length = 412

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 65/384 (16%), Positives = 117/384 (30%), Gaps = 22/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+     L  +                 ++K  +   +  TL     G    S  E
Sbjct: 26  GTPLYVYSAATLRRHFTAFDSAFGGLPHLTCFSVKANSNLSVLKTLAAMGAGVDIVSGGE 85

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117
           +          E   Y+   K                   ++ +L +    A++L    +
Sbjct: 86  LYRALAAGVAPEKIVYSGVGKRAAEIEQALTAGILMFNVESLGELERISAIAKRLGKTAQ 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCENK 170
           + LRINP V              ++ G   ++ + +  K +        G+  H   +  
Sbjct: 146 VSLRINPDVDPKTHPYISTGLKKNKFGLDIENSLAAYAKAMELPNITPVGIDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
           S   F   L       ++         ++ LGGG+     +        F + L +    
Sbjct: 206 SISPFLEALDKILTFREKLCAMGIVPRYLDLGGGLGIQYDEEDPPHPKEFGEALTKALGD 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + + LEPG  IV N   L T V+   +   K+ VIVD+++   +   L     A    
Sbjct: 266 LPMTLILEPGRVIVGNAGILVTEVVYTKKTPSKDFVIVDAAMNDLIRPSLYDSFHAIREV 325

Query: 284 NTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                      V G  C +GD          V  G+ ++      Y     + +N     
Sbjct: 326 RPAGRETLNVDVVGPICESGDFLARDRDLPAVAPGELLAVYSAGAYGFTMSSNYNSRPRA 385

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + + +    A R  +Y D   
Sbjct: 386 AEVLVDGETVTVARRRETYEDLIA 409


>gi|289207307|ref|YP_003459373.1| diaminopimelate decarboxylase [Thioalkalivibrio sp. K90mix]
 gi|288942938|gb|ADC70637.1| diaminopimelate decarboxylase [Thioalkalivibrio sp. K90mix]
          Length = 434

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 65/390 (16%), Positives = 126/390 (32%), Gaps = 24/390 (6%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           ++ TP Y+  +  L  +             ++  A+K  +A G+ + L +   G    S 
Sbjct: 24  LVGTPAYVYSRATLERHYRAFSEALIGTPHQVCFAVKANSALGVLNVLARLGAGFDIVSG 83

Query: 61  YEVMLG-HEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+              ++   K       A+          +  +L + +  A    + 
Sbjct: 84  GELERVLRAGGDPAKVVFSGVGKTAAEMRRALKVGIHCFNVESAPELERLESIAAEMGVT 143

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCE 168
             + +R+NP V              ++ G   ++         +S+     G+ FH   +
Sbjct: 144 APVSIRVNPDVDAETHPYIATGLRENKFGVAIEEAPALYARVRDSQHLEATGVDFHIGSQ 203

Query: 169 NKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFS 222
                 F+  LK +     +      ++E I +GGG+    +D    +   +   L++  
Sbjct: 204 LTRIDPFTDALKRVLTLVDQLAADGIELEHIDVGGGLGVRYRDETPPEPDAWASALRKVM 263

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATI 281
            + S+++ LEPG AI  N     T V  +     +   IVD ++   +   L       I
Sbjct: 264 GERSLKVLLEPGRAIAANAGVFLTRVEYLKHTEAHDFAIVDGAMNDLLRPALYGAWQEII 323

Query: 282 ----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                  T   T  + G  C  GD  G       +  GD ++      Y       +N  
Sbjct: 324 PVVQRRETAARTYDIVGPVCETGDFLGRERELA-LAAGDVLAVRSAGAYGYVMAGNYNSR 382

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367
             P   + + D      R    +      S
Sbjct: 383 PRPPEIMVDGDHFQIINRREQVDHLMMRES 412


>gi|225848225|ref|YP_002728388.1| diaminopimelate decarboxylase [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225643357|gb|ACN98407.1| diaminopimelate decarboxylase [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 420

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 60/387 (15%), Positives = 125/387 (32%), Gaps = 23/387 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP+Y+  K+ +++ ++      K+    +  ALK  +   +     ++  G    S  
Sbjct: 30  IGTPFYIYSKKAIIDKINEYKEAFKDYPTLICYALKANSNLSILKIFEEHGLGADIVSGG 89

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKA--QKLHK 116
           E+    +         Y    K         N +       +  +L    + A  Q    
Sbjct: 90  ELYKARKVGIPSNKIVYAGVGKTDVEIIYAINENILSFNVESQMELEVINEIAKRQNKKA 149

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCEN 169
            I +RINP V              S+ G          K  ++ E  NV G+  H   + 
Sbjct: 150 NISIRINPDVDPKTHPYISTGLKKSKFGIDIGQALDVYKQAVKMENLNVVGIHCHIGSQI 209

Query: 170 KSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC----QRLKEFS 222
                +   ++   ++  +      ++++I +GGG+                   +    
Sbjct: 210 MDVSVYKEAVEKTVDLVFKLKKEGIELQFIDIGGGLGVKYYPEDNPPTAFDLANTVLPIV 269

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATI 281
           ++  +++ +EPG +++     L T V+   +      ++ DS +   +   +       I
Sbjct: 270 KQTGLKLIIEPGRSLIAQAGALITKVIFTKDKKDKHFVIVDSGMNDLIRPSIYNAYHHII 329

Query: 282 YPNTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                     A + G  C  GD FG       V  GD ++      Y  +  + +N    
Sbjct: 330 TVEEKQEKMVADIVGPICETGDFFGLDREIGKVNRGDLLAILTAGAYGSSMASNYNVRPK 389

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNNL 366
               + + D          Y+ +   L
Sbjct: 390 AIEILVDGDKFKIIKEREDYS-FITKL 415


>gi|330900736|gb|EGH32155.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. japonica
           str. M301072PT]
          Length = 415

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 61/384 (15%), Positives = 122/384 (31%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +                 +  A+K  +  G+ + L +   G    S  E
Sbjct: 26  GTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH--KK 117
           +          E   ++     ++    A+          +  +L + ++ A +L+    
Sbjct: 86  LERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQEVAAELNVRAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           I LR+NP V              ++ G       +  I+        V G+  H   +  
Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAEDVYIRASQLPNLEVIGVDCHIGSQLT 205

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
           +   F   L    ++    G     +  I LGGG+    +D       + +K   E+ + 
Sbjct: 206 TLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGLGVRYRDEEPPLAAEYIKAVRERLAG 265

Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280
           +   +  EPG  IV N   L T V  +         IVD+++   +   L        A 
Sbjct: 266 RDLGLLFEPGRFIVANAGALLTRVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVTAG 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              ++ P    + G  C  GD   +      +  GD ++      Y     + +N     
Sbjct: 326 RPRDSEPRAYDIVGPICETGDFLAKGRELA-LAEGDLLAVHSAGAYGFVMSSNYNTRGRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + +     +  R  +  + + 
Sbjct: 385 AEVLVDGSQAFEVRRRETVAELFA 408


>gi|88861274|ref|ZP_01135906.1| putative diaminopimelate decarboxylase [Pseudoalteromonas tunicata
           D2]
 gi|88816755|gb|EAR26578.1| putative diaminopimelate decarboxylase [Pseudoalteromonas tunicata
           D2]
          Length = 416

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 65/385 (16%), Positives = 125/385 (32%), Gaps = 24/385 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +   + + L +   G    S  E
Sbjct: 26  GTPCYVYSRATLERHYHAFTDAAAGQHHLVCYAVKANSNLAVLNVLARLGSGFDIVSQGE 85

Query: 63  -VMLGHEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
              +           ++   K                   + ++L +  D A +L +   
Sbjct: 86  LARVVAAGGDPRKVVFSGVAKTAHEIRYALELGIKCFNVESEAELERISDVATELGQTAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           I +R+NP +              ++ G +    +             + G+ FH   +  
Sbjct: 146 ISIRVNPDIDAKTHPYISTGLKENKFGIEIHRAVSVYQHAATLPGISIEGIDFHIGSQLT 205

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F A L     I K+       I+ + +GGG+          +P     Q ++  SE
Sbjct: 206 EVEPFLAALDKVLAIIKQLKTLNIHIKHLDVGGGLGVAYLAEEPPHPSSYVSQLVERLSE 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESATIY 282
              +++  EPG AI  N   L T V  + +N  KN  IVD+ +   +   L       I 
Sbjct: 266 FSDLELVFEPGRAIAANAGILITQVEFLKQNQGKNFAIVDAGMNDLLRPSLYQAWQNIIA 325

Query: 283 PNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            +     P +  + G  C  GD  G+      ++ GD ++      Y  +  + +N    
Sbjct: 326 VSPRSGTPSSYDIVGPVCETGDFLGKDRELS-LQQGDLLAVRSAGAYGFSMSSNYNSRPR 384

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
               + +     +  +  +  D Y 
Sbjct: 385 VAEIMVDGATAHEIRKRETIADLYQ 409


>gi|226946776|ref|YP_002801849.1| diaminopimelate decarboxylase [Azotobacter vinelandii DJ]
 gi|226721703|gb|ACO80874.1| diaminopimelate decarboxylase [Azotobacter vinelandii DJ]
          Length = 415

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 57/384 (14%), Positives = 115/384 (29%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +                 +  A+K  +   + + L +   G    S  E
Sbjct: 26  GTPTYVYSRAHIEERYRAYADALAGMPHLVCFAVKANSNLAVLNLLARLGAGFDIVSRGE 85

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++     ++    A+          +  +L + ++ A +L     
Sbjct: 86  LERVLAAGGDPARVVFSGVGKTREDMRRALEVGVHCFNVESDVELERLQEVAAELGVKAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G   +   E            V G+  H   +  
Sbjct: 146 VSLRVNPDVDAQTHPYISTGLKENKFGIDIEQAEEVYARAAELPNLEVLGIDCHIGSQLT 205

Query: 171 ---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224
               FL     L  +          I  + LGGG+    +D       D+   ++E  E 
Sbjct: 206 TLSPFLDTLDRLLLLVDRLAARGIVIRHLDLGGGLGVRYRDEQPPAPGDYIAAVRERIEG 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280
            ++ +  EPG +IV N   L T V  +         ++D+++   +   L          
Sbjct: 266 RALALVFEPGRSIVANAGVLLTRVEYLKHTEHKDFAVIDAAMNDLIRPALYQAWMDVVPV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                   +  + G  C  GD   +      +  GD ++      Y     + +N     
Sbjct: 326 TPHGGEVCSYDLVGPVCETGDFLAKDRELA-LVEGDLLAVRSAGAYGFVMSSNYNTRGRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + + +      R  +  D Y 
Sbjct: 385 AEVLVDGERMHLIRRRETIEDLYA 408


>gi|254458023|ref|ZP_05071450.1| carboxynorspermidine decarboxylase [Campylobacterales bacterium GD
           1]
 gi|207085416|gb|EDZ62701.1| carboxynorspermidine decarboxylase [Campylobacterales bacterium GD
           1]
          Length = 377

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 147/372 (39%), Positives = 219/372 (58%), Gaps = 7/372 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           IKTP Y+ +++ L  NL    +++K +G K++LALK FA W  F  + +Y+ G T+S L+
Sbjct: 7   IKTPCYICEEELLEKNLKLLDHVQKESGAKIILALKGFAMWSTFPQVKEYLHGCTASGLH 66

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKIG 119
           E  L  EKFG E H Y+ AYKD +ID +    D ++FN+ SQL K+ D+         I 
Sbjct: 67  EAKLAFEKFGKEVHTYSPAYKDEDIDEIAQISDHVVFNSPSQLFKYSDRVKKINPDVSIS 126

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           LRINP  S S   + +P   +SRLG    +  E  +K++NGL FH  CE  +      +L
Sbjct: 127 LRINPEQSASPKDIYNPCGIYSRLGTTLANFDEEVLKHINGLNFHALCEQGADE-LEDVL 185

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
              E++F  +   +++I+ GGG H T K Y V+   + +K+F  KY+V++YLEPGEAI  
Sbjct: 186 VAFEEKFSKYFKGLKYINFGGGHHITKKGYDVEKLIKIIKDFKSKYNVEVYLEPGEAIGW 245

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----TGPYTAMVCGR 295
            T  L ++VLDI  N  ++ I+D+S EAH+PD L     A +  +       +T    G 
Sbjct: 246 ETGVLVSSVLDIVHNGMDIAILDTSAEAHMPDTLAMPYRADVRDSGEALEKEFTYRFGGN 305

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           +CLAGDI G++ F+K +KIGD++ FED   Y   +   FNGI +P++A+   DGT++ ++
Sbjct: 306 TCLAGDIMGDYSFDKVLKIGDKVIFEDQIHYTFVKNTTFNGIKLPSLAIYRKDGTLEVVK 365

Query: 356 EFSYNDYYNNLS 367
           EF Y DY N LS
Sbjct: 366 EFGYEDYRNRLS 377


>gi|330941151|gb|EGH44030.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 415

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 61/384 (15%), Positives = 120/384 (31%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +                 +  A+K  +  G+ + L +   G    S  E
Sbjct: 26  GTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH--KK 117
           +          E   ++     ++    A+          +  +L + ++ A +L+    
Sbjct: 86  LERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQEVAAELNVRAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           I LR+NP V              ++ G       +  I+        V G+  H   +  
Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAEDVYIRASQLPNLKVIGVDCHIGSQLT 205

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
           +   F   L     +    G     +  I LGGG+    +D         +K   E+ + 
Sbjct: 206 TLEPFIDALDRLLALVDRLGDCGIHLHHIDLGGGLGVRYRDEEPPLAADYIKAVRERLAG 265

Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280
           +   +  EPG  IV N   L T V  +         IVD+++   +   L        A 
Sbjct: 266 RDLGLLFEPGRFIVANAGALLTRVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVTAV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              ++ P    + G  C  GD   +      +  GD ++      Y     + +N     
Sbjct: 326 RPRDSEPRAYDIVGPICETGDFLAKGRELA-LAEGDLLAVHSAGAYGFVMSSNYNTRGRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + +     +  R  +  + + 
Sbjct: 385 AEVLVDGSQAFEVRRRETVAELFA 408


>gi|332977415|gb|EGK14192.1| diaminopimelate decarboxylase [Psychrobacter sp. 1501(2011)]
          Length = 447

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 66/390 (16%), Positives = 132/390 (33%), Gaps = 26/390 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  K+ +L               ++  A+K  +   +   L +   G    S  E
Sbjct: 54  GTPLYVYSKKAILEAYQAYSDSFAEIDHQVCYAVKANSNLAVLKVLAEAGAGFDLVSSGE 113

Query: 63  VMLGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +          +   ++   K       A+ +        ++S+L++  + A   ++   
Sbjct: 114 LARVLAVGADPKKIVFSGVGKTVSEMKAALQAGIGCFNVESLSELDRLNEVAAEMQVKAP 173

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           I +R+NP V              ++ G      +E+           + G+  H   +  
Sbjct: 174 ISIRVNPDVDAKTHPYISTGLKDNKFGISHDVAVEAYKHANSLANLQIVGIDCHIGSQLT 233

Query: 171 SFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYP---VKDFCQRLKEFSEK 224
               F A L  +            ++E I LGGG+     D     V +F   L    ++
Sbjct: 234 EIDPFVAALDKVCELIDALKQAGIELEHIDLGGGLGVIYIDEQVAEVSEFANALLPKLKQ 293

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIYP 283
             ++++ EPG +IV N   L T V  +         IVD+++   +   L   E A I  
Sbjct: 294 LGLKVFFEPGRSIVANAGVLLTQVEVLKPTEHKNFAIVDAAMNDLIRPALYQAEMAVIPV 353

Query: 284 NTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
           N+ P       +  + G  C  GD   +      + +G+ ++      Y     + +N  
Sbjct: 354 NSQPQSQTQEQSWDIVGAVCETGDFLAKKRLLS-LAVGEVLAITGAGAYGFVMSSNYNSR 412

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367
             P   + + D      +  +    ++  S
Sbjct: 413 PRPAEVMVSADKHQVVRKRETIEQLFDTES 442


>gi|298489348|ref|ZP_07007362.1| Diaminopimelate decarboxylase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298156139|gb|EFH97245.1| Diaminopimelate decarboxylase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 415

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 61/384 (15%), Positives = 120/384 (31%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +                 +  A+K  +  G+ + L +   G    S  E
Sbjct: 26  GTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +          E   ++     ++    A+          +  +L + ++ A +L     
Sbjct: 86  LERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQEVAAELDVRAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           I LR+NP V              ++ G    +  +  I+        V G+  H   +  
Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIANAEDVYIRASQLPNLEVIGVDCHIGSQLT 205

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
           +   F   L    ++    G     +  I LGGG+    +D         +K   E+ + 
Sbjct: 206 TLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGLGVRYRDEEPPLAADYIKAVRERLAG 265

Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280
           +   +  EPG  IV N   L T V  +         IVD+++   +   L        A 
Sbjct: 266 RDLGLLFEPGRFIVANAGALLTRVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVTAV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              +  P    + G  C  GD   +      +  GD ++      Y     + +N     
Sbjct: 326 RPRDGEPRAYDIVGPICETGDFLAKGRELA-LAEGDLLAVHSAGAYGFVMSSNYNTRGRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + +     +  R  +  + + 
Sbjct: 385 AEVLVDGSQAFEVRRRETVAELFA 408


>gi|148550336|ref|YP_001270438.1| diaminopimelate decarboxylase [Pseudomonas putida F1]
 gi|148514394|gb|ABQ81254.1| diaminopimelate decarboxylase [Pseudomonas putida F1]
          Length = 415

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 60/384 (15%), Positives = 119/384 (30%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +     +     +     +  A+K  +  G+ + L +   G    S  E
Sbjct: 26  GTPTYVYSRAHIEAQYRSYADALQGTEHLVCFAVKANSNLGVLNVLARLGAGFDIVSGGE 85

Query: 63  VMLGHEKFG-GETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +       G  +   ++     ++    A+          +  +L + +  A ++ K   
Sbjct: 86  LERVLAAGGRADRVVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQVVAAEMGKVAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D         +     V G+  H   +  
Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEAIYVRAAQLPNLEVVGVDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE---K 224
           +   F   L     +          +  + LGGG+    +D         +K   E   +
Sbjct: 206 TVEPFLDALDRLLVLVDRLAECGIHLRHLDLGGGVGVRYRDEQPPRVADYIKAIRERVGE 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280
             + +  EPG  IV N   L T V  +         I+D+++   +   L        A 
Sbjct: 266 RDLALVFEPGRYIVANAGVLLTRVEYLKHTEHKDFAIIDAAMNDLIRPALYQAWMGVSAV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                      + G  C  GD  G+      +  GD ++ E    Y     + +N     
Sbjct: 326 KPRAGEGRAYDLVGPICETGDFLGKDRVL-NLTEGDLLAVESAGAYGFVMSSNYNTRGRC 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + + D   +  R  +  + Y 
Sbjct: 385 AEILVDGDQAFEVRRRETVAELYA 408


>gi|15600470|ref|NP_253964.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa PAO1]
 gi|12230897|sp|P19572|DCDA_PSEAE RecName: Full=Diaminopimelate decarboxylase; Short=DAP
           decarboxylase
 gi|9951590|gb|AAG08662.1|AE004940_6 diaminopimelate decarboxylase [Pseudomonas aeruginosa PAO1]
          Length = 415

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 61/384 (15%), Positives = 119/384 (30%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +                 +  A+K  +  G+ + L +   G    S  E
Sbjct: 26  GTPTYVYSRAHIEAQYRAYADALAGMPHLVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++     +D    A+          +  +L + +  A +L     
Sbjct: 86  LERVLAAGGDPAKVVFSGVGKTRDDMRRALEVGVHCFNVESGEELERLQRVAAELGVKAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    +         E +   V G+  H   +  
Sbjct: 146 VSLRVNPDVDAQTHPYISTGLKENKFGIAIDEAEAVYARAAELDHLEVIGVDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224
               F   L+    +          I  + LGGG+    +D       D+ + ++E    
Sbjct: 206 QLEPFLDALERLLGLVDRLAGKGIGIRHLDLGGGLGVRYRDEQPPLAGDYIRAIRERLHG 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQE---SAT 280
             + +  EPG +IV N   L T V  +         IVD+++   +   L        A 
Sbjct: 266 RDLTLVFEPGRSIVANAGVLLTRVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVQAV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              +  P    + G  C  GD   +      +  GD ++      Y     + +N     
Sbjct: 326 RPRDAAPRRYDLVGPICETGDFLAKDRDLA-LAEGDLLAVRSAGAYGFVMSSNYNTRGRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + + + T +  R  +  + Y 
Sbjct: 385 AEVLVDGEQTHEVRRRETVQELYA 408


>gi|107104378|ref|ZP_01368296.1| hypothetical protein PaerPA_01005454 [Pseudomonas aeruginosa PACS2]
 gi|218894380|ref|YP_002443250.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa LESB58]
 gi|254243836|ref|ZP_04937158.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa 2192]
 gi|126197214|gb|EAZ61277.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa 2192]
 gi|218774609|emb|CAW30426.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa LESB58]
          Length = 415

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 61/384 (15%), Positives = 119/384 (30%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +                 +  A+K  +  G+ + L +   G    S  E
Sbjct: 26  GTPTYVYSRAHIEAQYRAYADALAGMPHLVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++     +D    A+          +  +L + +  A +L     
Sbjct: 86  LERVLAAGGDPAKVVFSGVGKTRDDMRRALEVGVHCFNVESGEELERLQRVAAELGVKAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    +         E +   V G+  H   +  
Sbjct: 146 VSLRVNPDVDAQTHPYISTGLKENKFGIAIDEAEAVYARAAELDHLEVIGVDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224
               F   L+    +          I  + LGGG+    +D       D+ + ++E    
Sbjct: 206 QLEPFLDALERLLGLVDRLAGKGIGIRHLDLGGGLGVRYRDEQPPLAGDYIRAIRERLHG 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQE---SAT 280
             + +  EPG +IV N   L T V  +         IVD+++   +   L        A 
Sbjct: 266 RDLTLVFEPGRSIVANAGVLLTRVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVQAV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              +  P    + G  C  GD   +      +  GD ++      Y     + +N     
Sbjct: 326 RPRDAAPRRYDLVGPICETGDFLAKDRDLA-LAEGDLLAVRSAGAYGFVMSSNYNTRGRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + + + T +  R  +  + Y 
Sbjct: 385 AEVLVDGEQTHEVRRRETVQELYA 408


>gi|152985290|ref|YP_001351336.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa PA7]
 gi|150960448|gb|ABR82473.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa PA7]
          Length = 415

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 61/384 (15%), Positives = 120/384 (31%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +                 +  A+K  +  G+ + L +   G    S  E
Sbjct: 26  GTPTYVYSRAHIEAQYRAYADALAGMPHLVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++     +D    A+          +  +L + +  A +L     
Sbjct: 86  LERVLAAGGDPAKVVFSGVGKSRDDMRRALQVGVHCFNVESSEELERLQRVAAELGVKAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    +         E +   V G+  H   +  
Sbjct: 146 VSLRVNPDVDAQTHPYISTGLKENKFGIAIDEAEAIYARAAELDHLEVIGVDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224
               F   L+    +          I  + LGGG+    +D       D+ + ++E    
Sbjct: 206 QLAPFLDALERLLGLVDRLAARGIAIRHLDLGGGLGVRYRDEQPPLAGDYIRAIRERLHG 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQE---SAT 280
             + +  EPG +IV N   L T V  +     K+  IVD+++   +   L        A 
Sbjct: 266 RDLTLVFEPGRSIVANAGVLLTRVEYLKHTGHKDFAIVDAAMNDLIRPALYQAWMDVQAV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              +  P    + G  C  GD   +      +  GD ++      Y     + +N     
Sbjct: 326 RPRDAAPRRYDLVGPICETGDFLAKDRELA-LAEGDLLAIRSAGAYGFVMSSNYNTRGRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + + +   +  R  +  + Y 
Sbjct: 385 AEVLVDGERAHEVRRRETVPELYA 408


>gi|313114514|ref|ZP_07800028.1| putative carboxynorspermidine decarboxylase [Faecalibacterium cf.
           prausnitzii KLE1255]
 gi|310623137|gb|EFQ06578.1| putative carboxynorspermidine decarboxylase [Faecalibacterium cf.
           prausnitzii KLE1255]
          Length = 405

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 129/378 (34%), Positives = 196/378 (51%), Gaps = 14/378 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP YL+D+ +L  N +  L +++  G K+LLA K F+ + ++  L  Y+ GT +S LY
Sbjct: 24  LPTPCYLLDEGQLRRNGELLLGVQQRTGCKILLAQKAFSNFNVYPVLAPYLAGTEASGLY 83

Query: 62  EVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           E  LG E+    E H +  AY+  E   +L   D I+FN+ SQL KF   A+   K +GL
Sbjct: 84  ESRLGKEELPEKENHVFCAAYRADEFAELLQYADHIVFNSPSQLAKFGPAAKAAGKSVGL 143

Query: 121 RINPSVSYS-KFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSFL 173
           R+NP  S      + DP  P SRLG              +  + ++GL FH  CE  +  
Sbjct: 144 RLNPECSTQEGHAIYDPCAPGSRLGTTRAQWDAAVQADPALPELLDGLHFHTLCEQDA-D 202

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
             +  L  +E +FG  + +++W++ GGG H T   Y +    Q + E  +KY VQ+YLEP
Sbjct: 203 ALALTLAAVEAKFGGLLPRMKWLNFGGGHHITRPGYRLATLEQCITETQKKYGVQVYLEP 262

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIY----PNTGPY 288
           GEA   N   L TTVLD  +N +  + + D S   H PD +       +     P   PY
Sbjct: 263 GEAWALNAGYLVTTVLDTLQNGETSLAILDMSAACHTPDVIEMPYRPPLLDAGDPGEKPY 322

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348
              + G +CLAGD+ G++ F  P+  G R+ F D+A Y   + N FNG+ +P I   + +
Sbjct: 323 LIRLGGPTCLAGDVVGDYSFASPLTEGQRLIFGDMAIYTTCKNNTFNGMPLPPIWAMDEN 382

Query: 349 GTIKAIREFSYNDYYNNL 366
           GT + + +F Y+D+   L
Sbjct: 383 GTCRELVKFGYSDFKMRL 400


>gi|218885457|ref|YP_002434778.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218756411|gb|ACL07310.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 416

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 60/384 (15%), Positives = 113/384 (29%), Gaps = 22/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+     L  +           G     ++K  +   +   L     G    S  E
Sbjct: 26  GTPLYVYSAATLRRHFQAFDSAFTGVGHLTCYSVKANSNVHLLRLLADMGAGMDIVSGGE 85

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--K 117
           +         G+   Y+   K  +        D       +V +L +    A ++ +  +
Sbjct: 86  LHRALAAGVPGQRIVYSGVGKQDDEIRAALEADILLFNVESVQELERINAVAGQMGRTAR 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           IG+RINP V              ++ G   +  + +             G+  H   +  
Sbjct: 146 IGVRINPDVDPKTHPYISTGMRNNKFGLDMEQALAAYLLARDLPNVQPVGIDCHIGSQLT 205

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
           +   F   L    +  +        I  + LGGG+  T  +        F + + E    
Sbjct: 206 TLAPFLEALDRVLDFHERLRDLGLAITHLDLGGGLGITYGEETPPHPREFGEAVSERLRG 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES---AT 280
             + + LEPG  I  N   L   V+          I+ D+++   V   L          
Sbjct: 266 RGLSLILEPGRVIAGNAGILVGRVIYTKSTPSKNFIIADAAMNDLVRPSLYQSYHRIAEV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                   TA V G  C +GD          ++ G+ ++      Y  +  + +N     
Sbjct: 326 QPAGRDEITADVVGPICESGDFLARDRILPDMQQGELLAVFSAGAYGFSMSSNYNSRPRA 385

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + +        +  +  D   
Sbjct: 386 AEVLVDGATARCIRKRETLADLVA 409


>gi|239906765|ref|YP_002953506.1| diaminopimelate decarboxylase [Desulfovibrio magneticus RS-1]
 gi|239796631|dbj|BAH75620.1| diaminopimelate decarboxylase [Desulfovibrio magneticus RS-1]
          Length = 412

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 62/384 (16%), Positives = 111/384 (28%), Gaps = 22/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+     L  +                 ++K  +   +  TL     G    S  E
Sbjct: 26  GTPLYVYSAATLRRHFRAFDSAFAALPHLTCYSVKANSNLSVLKTLAAMGAGMDIVSGGE 85

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117
           +          +   Y+   K                   +  +L +    A +L    +
Sbjct: 86  LYRALAAGVDPQKIVYSGVGKRASEIEEALKAGILMFNVESTGELERLSAIASRLGKTAQ 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCENK 170
           + LRINP+V              ++ G      + +  K +        G+  H   +  
Sbjct: 146 VSLRINPNVDPKTHPYISTGLKKNKFGLDIDHSLAAYAKAMELPGVTPVGIDCHIGSQLT 205

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ---RLKEFSEK 224
           S   F   L        +      +  ++ LGGG+     +       +    L +    
Sbjct: 206 SISPFLEALDKILAFRDKLTAMGIETRYLDLGGGLGIQYNEEEPPHPSEFGQALTKALGD 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP 283
             + + LEPG  IV N   L T  +   +      I+ D+++   +   L     A    
Sbjct: 266 LPITLILEPGRVIVGNAGILVTEAVYTKKTPSKDFIIVDAAMNDLIRPSLYDSYHAIREV 325

Query: 284 NTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                      V G  C +GD          V  G+ ++      Y     + +N     
Sbjct: 326 RPAGRPELSVDVVGPICESGDFLARDRALPAVAPGEHLAVFSAGAYGFTMSSNYNSRPRA 385

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + + D  I A R  SY+D   
Sbjct: 386 AEILVDGDEVIVARRRESYDDLIA 409


>gi|218886627|ref|YP_002435948.1| carboxynorspermidine decarboxylase [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218757581|gb|ACL08480.1| carboxynorspermidine decarboxylase [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 405

 Score =  246 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 123/391 (31%), Positives = 202/391 (51%), Gaps = 27/391 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQY----MDGTTSS 58
            +P +++D+ ++  N      +++  G ++LLALK FA W +F  L++     + GT +S
Sbjct: 16  PSPCFVVDEARIEANAAILDTVQRRTGARVLLALKGFAMWSLFPLLSRAHGGVLHGTCAS 75

Query: 59  SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHK 116
           S +E  LG E+FGGE HA+   Y D ++  +++  D ++FN+ +Q ++F+    A     
Sbjct: 76  SPHEARLGREEFGGEVHAFAAGYSDADMAELVTLADHLVFNSFAQWSRFRPAVAAAGRPI 135

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI----------ESEIKNVNGLMFHNN 166
           + G+RINP  S     + +P  P SRLG +               E  +  ++GL FH  
Sbjct: 136 ECGIRINPEHSEGAVAIYNPCSPGSRLGVRPHHFEAALAEAAARGEDALDGISGLHFHTL 195

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226
           CE          L  +E  FG  +++++W++ GGG H T   Y +   C+ +    +KY 
Sbjct: 196 CEQD-ADALDRTLHAVEARFGAHLSRMKWLNFGGGHHVTRPGYDLDLLCRCIDRMQQKYG 254

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----Y 282
           VQ+Y+EPGEA+  N   L  TVLD+ +    + I+D+S  AH+PD L             
Sbjct: 255 VQVYIEPGEAVALNAGVLLCTVLDVVQADMPIAILDTSAAAHMPDVLEMPYRPGCIGSGL 314

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
           P    +T    G+SCLAGD+ GE+ F+ P++ GDR++F D+A Y++ +   FNG+ +P I
Sbjct: 315 PGERAWTCRFAGKSCLAGDVIGEYSFDAPLQPGDRLAFLDMAIYSMVKTTTFNGLQLPAI 374

Query: 343 AVKNVDGT------IKAIREFSYNDYYNNLS 367
           A     G        + +R F Y  +   LS
Sbjct: 375 ARYRPAGADGRAARREVVRSFGYEAFKYRLS 405


>gi|330976601|gb|EGH76645.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. aptata str.
           DSM 50252]
          Length = 415

 Score =  246 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 61/384 (15%), Positives = 121/384 (31%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +                 +  A+K  +  G+ + L +   G    S  E
Sbjct: 26  GTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH--KK 117
           +          E   ++     ++    A+          +  +L + ++ A +L+    
Sbjct: 86  LERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQEVAAELNVRAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           I LR+NP V              ++ G       +  I+        V G+  H   +  
Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAEDVYIRASQLPNLEVIGVDCHIGSQLT 205

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
           +   F   L    ++    G     +  I LGGG+    +D         +K   E+ + 
Sbjct: 206 TLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGLGVRYRDEEPPLAADYIKAVRERLAG 265

Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280
           +   +  EPG  IV N   L T V  +         IVD+++   +   L        A 
Sbjct: 266 RDLGLLFEPGRFIVANAGALLTRVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVTAV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              ++ P    + G  C  GD   +      +  GD ++      Y     + +N     
Sbjct: 326 RPRDSEPRAYDIVGPICETGDFLAKGRELA-LAEGDLLAVHSAGAYGFVMSSNYNTRGRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + +     +  R  +  + + 
Sbjct: 385 AEVLVDGSQAFEVRRRETVAELFA 408


>gi|146305308|ref|YP_001185773.1| diaminopimelate decarboxylase [Pseudomonas mendocina ymp]
 gi|145573509|gb|ABP83041.1| diaminopimelate decarboxylase [Pseudomonas mendocina ymp]
          Length = 415

 Score =  246 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 56/384 (14%), Positives = 115/384 (29%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +                 +  A+K  +  G+ + L +   G    S  E
Sbjct: 26  GTPTYVYSRAHIEAQYRAYADALAGMPHLVCFAVKANSNLGVLNVLARLGAGFDIVSSGE 85

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117
           +              ++     +D    A+          +  +L + +  A +  L   
Sbjct: 86  LERVLAAGGEPSRIVFSGVGKSRDDMRRALEVGVHCFNVESSVELERLQKVAAELGLKAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G   +          E     V G+  H   +  
Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIDIEQAEAVYARAAELPNLEVVGVDCHIGSQLT 205

Query: 171 SFLCF---SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224
           +   F      L  +          I+ + LGGG+    +D       D+   +++    
Sbjct: 206 TLEPFLDALDRLLLLVDRLAARGIHIKHLDLGGGLGVQYRDEQPPLAGDYIAAVRKRLAG 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280
             + +  EPG  IV N   L T V  +         I+D+++   +   L          
Sbjct: 266 RDLALVFEPGRFIVANAGVLLTQVEYLKHTEHKDFAIIDAAMNDLIRPALYQAWMDVSPV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              +       + G  C  GD   +      ++ GD ++      Y     + +N     
Sbjct: 326 QPRDGEARHYDLVGPICETGDFLAKDRQLV-LEEGDLLAVRSAGAYGFVMSSNYNTRGRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + + +   +  R  +  + Y 
Sbjct: 385 AEVLVDGEQAYEVRRRETVQELYA 408


>gi|323697888|ref|ZP_08109800.1| diaminopimelate decarboxylase [Desulfovibrio sp. ND132]
 gi|323457820|gb|EGB13685.1| diaminopimelate decarboxylase [Desulfovibrio desulfuricans ND132]
          Length = 412

 Score =  246 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 64/384 (16%), Positives = 111/384 (28%), Gaps = 22/384 (5%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP Y+        +                 ++K  +   +   L     G    S  E+
Sbjct: 27  TPLYIYSAATFRRHFHAFDSAFDALDHLTCFSVKANSNLAVLKMLAAEGAGMDIVSGGEL 86

Query: 64  MLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG- 119
                         Y+   K                   ++++L +    A ++      
Sbjct: 87  YRALQAGVDPSRIVYSGVGKRDSEIREALEARILMFNVESLAELERIDQVAGEMGTTARV 146

Query: 120 -LRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCENKS 171
             RINP V              ++ G          K   E +     G+  H   +  S
Sbjct: 147 SFRINPDVDPQTHPYISTGMQKNKFGLDIDMSMQAYKRAAELKHVEPVGMDCHIGSQLTS 206

Query: 172 FLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ---RLKEFSEKY 225
              F   L               +I+++ LGGG+     +       +    L +  +  
Sbjct: 207 LDPFLEALDKLLAFNARLKDLGIEIKYLDLGGGLGIPYNEEEPPHPAEFGKALSDKLKGL 266

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQES---ATI 281
            +++ LEPG  I  N   L T V+       KN +IVD+++   V   L           
Sbjct: 267 PLKVILEPGRVIAGNAGILVTEVVYTKSNPAKNFLIVDAAMNDLVRPSLYGSYHRIAEVE 326

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                P    V G  C +GD          V  G+ +       Y  +  + +N      
Sbjct: 327 PKGRAPKVFDVVGPICESGDFLARDRELPEVMQGELLVVYSAGAYGFSMSSNYNSRPRAC 386

Query: 342 IAVKNVDGTIKAIREFSYNDYYNN 365
             + + D  I A R  +Y+D   N
Sbjct: 387 ELLVDGDKVIVARRRETYDDLLMN 410


>gi|197120414|ref|YP_002140841.1| diaminopimelate decarboxylase [Geobacter bemidjiensis Bem]
 gi|197089774|gb|ACH41045.1| diaminopimelate decarboxylase [Geobacter bemidjiensis Bem]
          Length = 417

 Score =  246 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 62/385 (16%), Positives = 118/385 (30%), Gaps = 22/385 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P Y+  K  L  +          A   +  ++K  +   +  T      G    S  
Sbjct: 25  VGSPVYIYSKATLERHYKAMDDAFAQAPHTICYSVKANSNLAVLKTFINLGGGVDIVSGG 84

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118
           E+          +   Y+   K  +  A             +  +L++  D A ++ KK 
Sbjct: 85  ELYRALAAGVDPKKVVYSGVGKRDDEIAYALESGILMFNIESEQELDRISDIAGRIGKKA 144

Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
           G+  R+NP V              ++ G   +  +E   +        + G+  H   + 
Sbjct: 145 GIAIRVNPDVDPQTHPYITTGLKKAKFGINIERALEQYQRAKGLANIEILGIDCHIGSQL 204

Query: 170 KSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSE 223
                F   +K +++           I+++ LGGG+     D            ++E ++
Sbjct: 205 TKVSPFVDAIKKLKRLLDGVRGMGIDIKYLDLGGGLGIQYDDEAPPLPADYGSSIQEETK 264

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES---A 279
              + +  EPG  +V N   L    L   +   KN VIVD+ +       L         
Sbjct: 265 DLGLHLIFEPGRNLVGNAGILVGKCLYTKKGEEKNFVIVDAGMNDLARPSLYGSFHGVRP 324

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                 G     + G  C +GD   +       + GD I+F     Y     + +N    
Sbjct: 325 VFRNQDGVIEGDIVGPICESGDFLVKEREIPNFRQGDLIAFMSAGAYGFTMSSNYNSRPR 384

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
               + +              D   
Sbjct: 385 AAEVMVDGGKFEVVRDREKLEDLVR 409


>gi|28867457|ref|NP_790076.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|28850691|gb|AAO53771.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 415

 Score =  246 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 60/384 (15%), Positives = 120/384 (31%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +                 +  A+K  +  G+ + L +   G    S  E
Sbjct: 26  GTPTYVYSRAHIEAQYRAFADALSGMPHMVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH--KK 117
           +          E   ++     ++    A+          +  +L + ++ A +L+    
Sbjct: 86  LERVLAAGGKAERIVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQEVAAELNVRAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           I LR+NP V              ++ G       +  I+        V G+  H   +  
Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAEDVYIRASQLPNLEVIGVDCHIGSQLT 205

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
           +   F   L    ++    G     +  I LGGG+    +          +K   E+ + 
Sbjct: 206 TLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGLGVRYRHEEPPLAGDYIKAVRERLAG 265

Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280
           +   +  EPG  IV N   L T V  +         IVD+++   +   L        A 
Sbjct: 266 RDLGLLFEPGRFIVANAGVLLTQVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVTAV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              ++ P    + G  C  GD   +      +  GD ++      Y     + +N     
Sbjct: 326 RPRDSEPRAYDIVGPICETGDFLAKGRELA-LAEGDLLAVHSAGAYGFVMSSNYNTRGRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + +     +  R  +  + + 
Sbjct: 385 AEVLVDGTQAFEVRRRETVAELFA 408


>gi|282858847|ref|ZP_06267992.1| carboxynorspermidine decarboxylase [Prevotella bivia JCVIHMP010]
 gi|282588416|gb|EFB93576.1| carboxynorspermidine decarboxylase [Prevotella bivia JCVIHMP010]
          Length = 388

 Score =  246 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 122/375 (32%), Positives = 199/375 (53%), Gaps = 14/375 (3%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y++++ +L  NL     + K A V+++LA K +A W  F    +Y+  TT+SSL E  
Sbjct: 14  PVYVLEEDRLRKNLSLIANVAKKANVEIILAFKAYALWKTFPIFKEYISATTASSLSEAH 73

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--KIGLRI 122
           LG+E+FG   H ++ AY D E + +      + FN+++Q +++  KA++ +K   +GLR+
Sbjct: 74  LGYEEFGTPCHTFSPAYTDYEFEEIAKYSSHLTFNSLTQYDRYHLKARQYNKALSLGLRV 133

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           NP  S    +L +P  P +R G   +   E   ++V+G   H +CE+ S   F   L +I
Sbjct: 134 NPEYSEVGTLLYNPCSPGTRFGILAEKLPEILPEDVDGFHVHCHCESGS-DVFERTLVHI 192

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNT 241
           E++F  +  Q++WI+ GGG   T  DY +    Q L+ F  +Y   ++ LEPG A    T
Sbjct: 193 EEKFAKWFPQLKWINFGGGHLMTRADYDIDKLIQILQHFHSRYPWLKVILEPGSAFGWQT 252

Query: 242 TTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTG---------PYTAM 291
            +L + V+DI E       + + S  AH+PD L      T+              P T  
Sbjct: 253 GSLVSQVVDIVEYRGYRTAILNVSFTAHMPDCLEMPYHPTVRGAETLENGGETTEPTTYR 312

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
           + G SCL+GD  G + F+  ++IG+ I FED+  Y   + N FNGI+ P IA+ + +  +
Sbjct: 313 LGGNSCLSGDWMGNWRFDHKLQIGENIIFEDMLHYTTVKTNTFNGISHPAIALLHSNNEL 372

Query: 352 KAIREFSYNDYYNNL 366
           + +RE+SY DY   +
Sbjct: 373 EMLREYSYEDYRVRM 387


>gi|308051401|ref|YP_003914967.1| diaminopimelate decarboxylase [Ferrimonas balearica DSM 9799]
 gi|307633591|gb|ADN77893.1| diaminopimelate decarboxylase [Ferrimonas balearica DSM 9799]
          Length = 414

 Score =  246 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 62/382 (16%), Positives = 122/382 (31%), Gaps = 23/382 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +  +         +    +  A+K  +   + + L +   G    S  E
Sbjct: 26  GTPCYVYSRATIERHFHAFDRAVGDHPHLICYAVKANSNLAVLNLLARLGSGFDIVSGGE 85

Query: 63  -VMLGHEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKK 117
              +           ++   K  D    A+ +        + ++L +  +   A  L   
Sbjct: 86  LARVIQAGGDPGKVVFSGVGKTADEMRQALQAGIYCFNVESEAELERLNEVAGAMGLKAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           + LRINP V              ++ G       +            V G   H   +  
Sbjct: 146 VSLRINPDVDAGTHPYISTGLKENKFGIAMARAEQVFQRAASLPNLQVKGADCHIGSQLT 205

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224
           +   F   L     +          +  + +GGG+     +       ++ + L+E    
Sbjct: 206 TLPPFIDALDRLLALVDRLAELGIVLSHLDVGGGLGVRYDEESPPLPDEYARALREHLGN 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL--YQESATI 281
             + + LEPG AI+ N   L T V  +     ++  IVD+++   +   L   +Q    +
Sbjct: 266 RPLTLILEPGRAIMANAGVLLTEVAYLKTGEDRHFAIVDAAMNDLIRPSLYSAWQAIIPV 325

Query: 282 YPNTGPY-TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
            P  GP+ T  V G  C  GD  G+      ++ GD ++      Y     + +N     
Sbjct: 326 EPRDGPHQTYDVVGPVCETGDFLGKGRELC-IEPGDLLAVRSSGAYGFTMASNYNSRPRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDY 362
              + + D         +    
Sbjct: 385 AEVMVDGDAHHLIRARETVEQL 406


>gi|66043452|ref|YP_233293.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. syringae
           B728a]
 gi|63254159|gb|AAY35255.1| Diaminopimelate decarboxylase [Pseudomonas syringae pv. syringae
           B728a]
 gi|330970500|gb|EGH70566.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 415

 Score =  246 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 61/384 (15%), Positives = 120/384 (31%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +                 +  A+K  +  G+ + L +   G    S  E
Sbjct: 26  GTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH--KK 117
           +          E   ++     ++    A+          +  +L + ++ A +L+    
Sbjct: 86  LERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQEVAAELNVRAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           I LR+NP V              ++ G       +  I+        V G+  H   +  
Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAEDVYIRASQLPNLEVIGVDCHIGSQLT 205

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
           +   F   L     +    G     +  I LGGG+    +D         +K   E+ + 
Sbjct: 206 TLEPFIDALDRLLALVDRLGDCGIHLHHIDLGGGLGVRYRDEEPPLAADYIKAVRERLAG 265

Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280
           +   +  EPG  IV N   L T V  +         IVD+++   +   L        A 
Sbjct: 266 RDLGLLFEPGRFIVANAGALLTRVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVTAV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              ++ P    + G  C  GD   +      +  GD ++      Y     + +N     
Sbjct: 326 RPRDSEPRAYDIVGPICETGDFLAKGRELA-LAEGDLLAVHSAGAYGFVMSSNYNTRGRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + +     +  R  +  + + 
Sbjct: 385 AEVLVDGSQAFEVRRRETVAELFA 408


>gi|213970728|ref|ZP_03398853.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato T1]
 gi|301382616|ref|ZP_07231034.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato
           Max13]
 gi|302061756|ref|ZP_07253297.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato K40]
 gi|302133635|ref|ZP_07259625.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|213924562|gb|EEB58132.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato T1]
 gi|331017916|gb|EGH97972.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 415

 Score =  246 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 61/384 (15%), Positives = 121/384 (31%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +                 +  A+K  +  G+ + L +   G    S  E
Sbjct: 26  GTPTYVYSRAHIEAQYRAFADALSGMPHMVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH--KK 117
           +          E   ++     ++    A+          +  +L + ++ A +L+    
Sbjct: 86  LERVLAAGGKAERIVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQEVAAELNVRAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           I LR+NP V              ++ G       +  I+        V G+  H   +  
Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAEDVYIRASQLPNLEVIGVDCHIGSQLT 205

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
           +   F   L    ++    G     +  I LGGG+    +D         +K   E+ + 
Sbjct: 206 TLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGLGVRYRDEEPPLAGDYIKAVRERLAG 265

Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280
           +   +  EPG  IV N   L T V  +         IVD+++   +   L        A 
Sbjct: 266 RDLGLLFEPGRFIVANAGVLLTQVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVTAV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              ++ P    + G  C  GD   +      +  GD ++      Y     + +N     
Sbjct: 326 RPRDSEPRAYDIVGPICETGDFLAKGRELA-LAEGDLLAVHSAGAYGFVMSSNYNTRGRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + +     +  R  +  + + 
Sbjct: 385 AEVLVDGTQAFEVRRRETVAELFA 408


>gi|118594281|ref|ZP_01551628.1| diaminopimelate decarboxylase [Methylophilales bacterium HTCC2181]
 gi|118440059|gb|EAV46686.1| diaminopimelate decarboxylase [Methylophilales bacterium HTCC2181]
          Length = 415

 Score =  246 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 67/384 (17%), Positives = 141/384 (36%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  K+ +L++  +     K +   +  A+K      + + L  +  G    S  E
Sbjct: 28  DTPAYVYSKKSILDSYRSFEEAFKTSNHLICFAVKANPNLAILNLLANHGAGFDIVSGGE 87

Query: 63  V-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
           +  +   K   +   ++   K  +   +  +         +  +L + +  AQK+ K   
Sbjct: 88  LQRVIAAKGDPKKVVFSGIGKSSKEIELAIHHQILAFNIESEPELYRIQAIAQKMGKIAN 147

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNCENK 170
           +  R+NP+V              ++ G   +  IE            + G+  H   +  
Sbjct: 148 ISVRVNPNVDAKTHPYISTGLKDNKFGVDEQKAIELYKIANNMDSIAIRGIDCHIGSQIT 207

Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
               F   +  +             I  + +GGGI    ++      K + + +    EK
Sbjct: 208 ELSPFIDSIAKLVGIIDKLKVLGIHIAHLDIGGGIGINYENEKPPNFKAYAEAILPLLEK 267

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
            +++I  EPG AI+     L T V  + + + KN  I+D+++   +   L       I  
Sbjct: 268 QNLKIIFEPGRAILGKAGVLLTKVEYVKKGSTKNFAIIDAAMNDLMRPSLYNAYHDIINT 327

Query: 284 NTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
           +    +     V G  C  GD  G+      ++ G+ ++  DV  Y ++  + +N    P
Sbjct: 328 SQSSESSAQFDVVGPVCETGDFIGKDRMLS-LEEGNVLAVVDVGAYGMSMSSNYNSRVRP 386

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + + +  I+  +  ++ND   
Sbjct: 387 VELLVDENKIIEIRKRENFNDLIR 410


>gi|330964219|gb|EGH64479.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 415

 Score =  246 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 61/384 (15%), Positives = 120/384 (31%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +                 +  A+K  +  G+ + L +   G    S  E
Sbjct: 26  GTPTYVYSRAHIEAQYRAFADALSGMPHMVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +          E   ++     ++    A+          +  +L + ++ A +L     
Sbjct: 86  LERVLAAGGKAERIVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQEVAAELDVRAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           I LR+NP V              ++ G       +  I+        V G+  H   +  
Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAEDVYIRASQLPNLEVIGVDCHIGSQLT 205

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
           +   F   L    ++    G     +  I LGGG+    +D         +K   E+ + 
Sbjct: 206 TLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGLGVRYRDEEPPLAGDYIKAVRERLAG 265

Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280
           +   +  EPG  IV N   L T V  +         IVD+++   +   L        A 
Sbjct: 266 RDLGLLFEPGRFIVANAGVLLTQVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVTAV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              ++ P    + G  C  GD   +      +  GD ++      Y     + +N     
Sbjct: 326 RPRDSEPRAYDIVGPICETGDFLAKGRELA-LAEGDLLAVHSAGAYGFVMSSNYNTRGRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + +     +  R  +  + + 
Sbjct: 385 AEVLVDGTQAFEVRRRETVAELFA 408


>gi|297570155|ref|YP_003691499.1| diaminopimelate decarboxylase [Desulfurivibrio alkaliphilus AHT2]
 gi|296926070|gb|ADH86880.1| diaminopimelate decarboxylase [Desulfurivibrio alkaliphilus AHT2]
          Length = 430

 Score =  246 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 59/395 (14%), Positives = 112/395 (28%), Gaps = 32/395 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+YL     L  +         +       A+K  +   +     +   G    S  
Sbjct: 25  VGTPFYLYSTATLERHFKALDDSFADLAHLTCFAVKACSNIAILRLFARLGGGADIVSGG 84

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+              Y+   K       A+ +        +  +L      A +L    
Sbjct: 85  ELYRALAAGIDPGKIVYSGVGKTRAEIRQAIEAGILMFNLESEQELEVVAQCATELQTTA 144

Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
            +  R+NP V              ++ G    +      +        + G+  H   + 
Sbjct: 145 RISFRVNPDVDPQTHAYISTGLAKNKFGIPIAEAPAVYRRARELAGVEIVGVSCHIGSQL 204

Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSE 223
                F   +  ++K           ++++ +GGG+          +       +++   
Sbjct: 205 TKVSPFVDTIDKLKKFLARLAADGIAVKYLDIGGGLGIKYNQEEPPEPAAYGAAVRQALG 264

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDI-----------SENIKNLVIVDSSVEAHVPDY 272
           +    + LEPG  IV N   + T VL                 K  ++VD+ +       
Sbjct: 265 ELDCTLILEPGRVIVGNAGIMVTRVLYTKSGPKSSPENSHNGQKKFIVVDAGMNDLFRPS 324

Query: 273 LLYQESATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
           L     A +    G     TA V G  C  GD           + G+ ++ +    Y   
Sbjct: 325 LYDAYHAIVPVVQGDGATQTADVVGPICETGDFLARDQEVPAARPGELLAVKSAGAYGFT 384

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             + +N        + N        R  SY D   
Sbjct: 385 MASNYNSRPRVAEVLVNGTEFHVIRRRESYEDLIR 419


>gi|291288389|ref|YP_003505205.1| diaminopimelate decarboxylase [Denitrovibrio acetiphilus DSM 12809]
 gi|290885549|gb|ADD69249.1| diaminopimelate decarboxylase [Denitrovibrio acetiphilus DSM 12809]
          Length = 419

 Score =  246 bits (628), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 65/382 (17%), Positives = 116/382 (30%), Gaps = 21/382 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+     L           +     +  A+K     G+   L     G    S  
Sbjct: 25  VGTPFYVYSANGLRKRFREFDNAFEGMDRIVCYAVKACGNIGVLALLGSEGSGADIVSGG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKA--QKLHK 116
           E+              +    K  E      + D       +  +++     A       
Sbjct: 85  ELHRALKAGMDKNKIVFAGVGKTEEEIKFGISSDILMFNAESRQEIDLINKCAGEMNATA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-----NVN--GLMFHNNCEN 169
           +I +R+NP V              ++ G       E  I      N+   G+  H   + 
Sbjct: 145 RIAIRVNPDVDAKTHPYISTGLKKNKFGIPVDKAKEDYIYASSLPNIEAVGIHCHIGSQL 204

Query: 170 KSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSE 223
                F         + K+       I+++ LGGG+  T  D      K++ + +KE   
Sbjct: 205 TEISPFRDAAAILVKLIKDLRKNGVNIKYLDLGGGLGITYHDEHAPSHKEYAEAIKEVIR 264

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESAT-- 280
                +  EPG  I  N   L T VL   E  +    IVD+++       L         
Sbjct: 265 DEDFTLVFEPGRNISGNAGALVTKVLYTKETEEKSFKIVDAAMNDLARPSLYNAYHEVQA 324

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
           +      +T  + G  C + D   +      VK G   +  D   Y +   + +N     
Sbjct: 325 VDSTEKMFTGDIVGPICESSDFLAKDRNMPNVKRGGLYAVMDTGAYGMTMASNYNSRPRV 384

Query: 341 TIAVKNVDGTIKAIREFSYNDY 362
              + + +      R  +Y+D 
Sbjct: 385 PEILVDGENYHIVRRRETYDDL 406


>gi|94499872|ref|ZP_01306408.1| putative diaminopimelate decarboxylase [Oceanobacter sp. RED65]
 gi|94428073|gb|EAT13047.1| putative diaminopimelate decarboxylase [Oceanobacter sp. RED65]
          Length = 417

 Score =  246 bits (628), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 63/382 (16%), Positives = 123/382 (32%), Gaps = 24/382 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+  ++    +        KN    +  A+K  +   + + L +   G    S+ E
Sbjct: 27  GSPLYIYSRKAFSEHYLEYANAFKNEDALICYAVKANSNIAVLNVLAKLGAGFDIVSVGE 86

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++      D    A+          + S+L +    A+++     
Sbjct: 87  LERVLKAGGDPSKIVFSGVAKTADEMRRALAVGVHCFNVESESELERLNAVAEEMGVKAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G                +   + G+  H   +  
Sbjct: 147 LSLRVNPDVDAQTHPYISTGLKENKFGVDIDTAKQVYAKAKGMQGIEIKGVDCHIGSQLT 206

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
               F   L  +     E      ++E I LGGG+  T  D      ++F   +      
Sbjct: 207 QLEPFMDALDRVLVLVDELKEQAIELEHIDLGGGLGVTYDDEVPPTPQEFADAVLPKLAG 266

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
            ++++ LEPG +I  N     T V  +     K+  I+D  +   +   L       +  
Sbjct: 267 RNLKLVLEPGRSIAANAGIFVTQVEFLKSNGDKHFAIIDGGMNDLIRPSLYSAWQRIVEV 326

Query: 284 NTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                T      V G  C  GD  G+      +  GD ++ +    Y     + +N  N 
Sbjct: 327 QPREKTPKQNYDVVGPVCETGDFLGKDRELAIL-PGDLLAVKSAGAYGFVMASNYNTRNK 385

Query: 340 PTIAVKNVDGTIKAIREFSYND 361
           P   + + D +    R  + +D
Sbjct: 386 PAEVMVDGDQSHLIRRRETISD 407


>gi|152997590|ref|YP_001342425.1| diaminopimelate decarboxylase [Marinomonas sp. MWYL1]
 gi|150838514|gb|ABR72490.1| diaminopimelate decarboxylase [Marinomonas sp. MWYL1]
          Length = 417

 Score =  246 bits (628), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 62/382 (16%), Positives = 118/382 (30%), Gaps = 25/382 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  +   + + L +   G    S+ E
Sbjct: 26  GTPCYVYSRATLERHYKAYADAFASHPTLICYAVKACSNIAILNVLARLGSGFDIVSVGE 85

Query: 63  VMLGH-EKFGGETHAYN--VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +              ++      +    A+          + ++L +    A ++ K   
Sbjct: 86  LERVLKAGGEPSKVMFSGLGKQAEEMRRALEVGIHCFNVESEAELYRLDKVAGEMGKLAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G   KD +            NV G+  H   +  
Sbjct: 146 VSLRVNPDVDAKTHPYISTGLKENKFGIDIKDAVRIYKIAHELPNLNVMGVDCHIGSQLT 205

Query: 171 SFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--- 224
               F      +     E       I+ + LGGG+    +D    +     K   EK   
Sbjct: 206 ELKPFLDTFDRLIGLVDELAEVGITIKHLDLGGGLGVRYRDEVPPEPADYAKLLLEKVKG 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATI-- 281
            + ++  EPG +I  N   L T V  +  N      I+D ++   +   L       +  
Sbjct: 266 RNFELAFEPGRSIAANAGILLTQVEFLKCNPHKNFAIIDGAMNDLIRPSLYGAWMNIVPV 325

Query: 282 ---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
                  G     + G  C  GD  G+      ++ GD ++      Y     + +N  N
Sbjct: 326 SLLPTAEGKRNYDLVGPICETGDFLGKDREL-DIQAGDLLAVRSAGAYGFTMSSNYNSRN 384

Query: 339 MPTIAVKNVDGTIKAIREFSYN 360
                + + D T       +  
Sbjct: 385 RAAEVMVDGDKTYLIRARETIE 406


>gi|315639212|ref|ZP_07894374.1| carboxynorspermidine decarboxylase [Campylobacter upsaliensis JV21]
 gi|315480538|gb|EFU71180.1| carboxynorspermidine decarboxylase [Campylobacter upsaliensis JV21]
          Length = 382

 Score =  246 bits (628), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 135/379 (35%), Positives = 212/379 (55%), Gaps = 18/379 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TP Y++++ KL  N +    + + +G K+LLALK FA  G    + +Y+ G T S L+
Sbjct: 6   IQTPAYILEEDKLRKNCELLAKVSEKSGAKVLLALKGFAFSGAMKIVGEYLHGCTCSGLW 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E     E    E H ++ A+KD E D +      I+FN++ Q + FK+KA    K +GLR
Sbjct: 66  EAKFAKEFMDKEIHTFSPAFKDEEFDEIAELSHHIVFNSLHQFHHFKEKA--KAKSLGLR 123

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
            NP  S +   L +P   +SRLG   KD   +++  V+GL FH  CE +S     A+LK 
Sbjct: 124 CNPEYSLAPKELYNPCGRYSRLGILSKDLENADLSGVSGLHFHALCE-ESAEALEAVLKA 182

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            E +FG ++TQ++W++ GGG H T K Y V+      K+FS+K+ VQ+YLEPGEA+   T
Sbjct: 183 FEAKFGKWLTQMKWVNFGGGHHITKKGYDVEKLITLCKKFSDKFGVQVYLEPGEAVGWQT 242

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP---------------NTG 286
             L  +V+DI EN K + I+D+S EAH+PD ++   ++ +                   G
Sbjct: 243 GVLVASVIDIVENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARVLSTREGEQISSLREG 302

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
               ++ G +CLAGD+ GE+ F+  ++ GD+I F D   Y+I +   FNG+ +P + +  
Sbjct: 303 EKAYLLAGNTCLAGDVMGEYAFKNALQRGDKIVFLDQIHYSIVKNTTFNGVILPNLMLYT 362

Query: 347 VDGTIKAIREFSYNDYYNN 365
            +  ++ +R+FSY DY   
Sbjct: 363 KEKKLEIVRKFSYEDYAKR 381


>gi|327401963|ref|YP_004342802.1| diaminopimelate decarboxylase [Archaeoglobus veneficus SNP6]
 gi|327317471|gb|AEA48087.1| diaminopimelate decarboxylase [Archaeoglobus veneficus SNP6]
          Length = 427

 Score =  246 bits (628), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 74/391 (18%), Positives = 135/391 (34%), Gaps = 29/391 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P Y+  + +L  N+   +        +LL A+K      +   +++   G    S  
Sbjct: 29  LGSPLYVTSRGRLEENMKAYMQAF--PDARLLYAVKANNNLSIMKIISRAGFGADVFSDG 86

Query: 62  EVMLGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHKK 117
           E+ L     F  E   +N     + EI   +        +++ +L+        +    K
Sbjct: 87  ELYLALLAGFKPEKILFNGNSKSEEEIRMGVRAGTYFSVDSIDELHVLSEVAVEEGEEVK 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCENK 170
           I  RINP +S             S+ G   ++   +    V        G+  H   +  
Sbjct: 147 IAFRINPDISPETHPKISTGLRTSKFGIPWEEVANAYRLAVEMPGIVPAGIHCHIGSQIL 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFSE 223
               F   L    ++ +        +E++ LGGG+    +      P     + L  F E
Sbjct: 207 DISPFVEALNRLFDVAEVLEDMGIDVEFLDLGGGLGIDYEGKGSPTPADFAAKILPVFEE 266

Query: 224 KY-----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
           +      + +++LEPG +I+ NTT L T V  + +  KN V VD+     +   +     
Sbjct: 267 RKERLNSNPELWLEPGRSIIGNTTILLTKVNAVKKAYKNFVAVDAGFNLLMRPAMYNAYH 326

Query: 279 ----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
               A            + G  C +GD+  E      V+ GD I+  D   Y  +  + +
Sbjct: 327 RVAIANKMDREEEEVYTIVGPICESGDVLAEDRKLPRVERGDIIAIFDAGAYGFSMSSQY 386

Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           NG       +   +         SY D    
Sbjct: 387 NGRRRCAEVLVEGNKYYVIRERESYTDLVGK 417


>gi|167036274|ref|YP_001671505.1| diaminopimelate decarboxylase [Pseudomonas putida GB-1]
 gi|166862762|gb|ABZ01170.1| diaminopimelate decarboxylase [Pseudomonas putida GB-1]
          Length = 415

 Score =  246 bits (628), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 59/384 (15%), Positives = 118/384 (30%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +     +     +     +  A+K  +  G+ + L +   G    S  E
Sbjct: 26  GTPTYVYSRAHIEAQYRSYADALQGTEHLVCFAVKANSNLGVLNVLARLGAGFDIVSGGE 85

Query: 63  VMLGHEKFG-GETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +       G  +   ++     ++    A+          +  +L + +  A ++ K   
Sbjct: 86  LERVLAAGGRADRVVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQVVAAEMGKVAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D         +     V G+  H   +  
Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEAIYVRAAQLPNLEVVGVDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE---K 224
           +   F   L     +          +  + LGGG+    +D         +K   E   +
Sbjct: 206 TVEPFLDALDRLLVLVDRLAECGIHLRHLDLGGGVGVRYRDEQPPLVADYIKAIRERVGE 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280
             + +  EPG  IV N   L T V  +         I+D+++   +   L        A 
Sbjct: 266 RDLALVFEPGRYIVANAGVLLTRVEYLKHTEHKDFAIIDAAMNDLIRPALYQAWMGVSAV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                      + G  C  GD  G+      +  GD ++      Y     + +N     
Sbjct: 326 KPRAGEGRAYDLVGPICETGDFLGKDRVL-NLAEGDLLAVASAGAYGFVMSSNYNTRGRC 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + + D   +  R  +  + Y 
Sbjct: 385 AEILVDGDQAFEVRRRETIAELYA 408


>gi|254464493|ref|ZP_05077904.1| diaminopimelate decarboxylase [Rhodobacterales bacterium Y4I]
 gi|206685401|gb|EDZ45883.1| diaminopimelate decarboxylase [Rhodobacterales bacterium Y4I]
          Length = 421

 Score =  246 bits (628), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 63/390 (16%), Positives = 121/390 (31%), Gaps = 26/390 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+     LL +        +     +  A+K  +   +  TL Q   G    S  
Sbjct: 25  VGTPFYVYSTATLLRHFRLFDEALEGTDHLVCFAMKAASNQAILKTLAQAGAGMDVVSQG 84

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E +        G+   ++   K  E    A+          +  ++      A++L    
Sbjct: 85  EYLRARAAGVPGDRIVFSGVGKTAEEIRVALTGGIRQFNVESEPEMEVISAVAEELGAKA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
            I +R+NP V           +  ++ G       E   +        V G+  H   + 
Sbjct: 145 PITIRVNPDVDAKTHAKIATGKSENKFGIPIARAREVYARAAALPGLEVVGIDVHIGSQL 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221
                F    + + +           I  + LGGG+    +          ++   +KE 
Sbjct: 205 TDLEPFRLAYQKVAELTETLRADGHDIRRLDLGGGLGIPYERSNSAPPLPVEYGAMVKET 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280
                 +I +EPG  I  N   L + V+ +        ++ D+++   +   +       
Sbjct: 265 LGHLGCEIEIEPGRLIAGNAGQLVSKVIYVKSGEGRDFVILDAAMNDLIRPAMYEAHHDI 324

Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           I               + G  C  GD F +     P+  GD +SF     Y     + +N
Sbjct: 325 IPVQEPEAGTESRPYDIVGPVCETGDTFAKQRDLPPLAAGDLVSFRSAGAYGAVMASEYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              +    + + D      R   Y +  N 
Sbjct: 385 SRPLIPEVLVHGDQFAVIRRRPDYEEMINR 414


>gi|148643431|ref|YP_001273944.1| diaminopimelate decarboxylase, LysA [Methanobrevibacter smithii
           ATCC 35061]
 gi|222445673|ref|ZP_03608188.1| hypothetical protein METSMIALI_01314 [Methanobrevibacter smithii
           DSM 2375]
 gi|148552448|gb|ABQ87576.1| diaminopimelate decarboxylase, LysA [Methanobrevibacter smithii
           ATCC 35061]
 gi|222435238|gb|EEE42403.1| hypothetical protein METSMIALI_01314 [Methanobrevibacter smithii
           DSM 2375]
          Length = 427

 Score =  246 bits (628), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 64/392 (16%), Positives = 123/392 (31%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ID+ ++ +N +             ++  A K      +   L        + S 
Sbjct: 28  GTPTYVIDENRIRDNYNRFYNAFSKYYPDFRVYYACKANTNLAVMRILESEGCCIDAVSP 87

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKI 118
            EV    +  F GE   +       E    ++     +  ++VS L +  +       KI
Sbjct: 88  GEVYTSKKLGFPGERILFTGNNVTTEELKFVAEQGAVLNLDSVSALKRLAEVVDPEGFKI 147

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSF 172
             R+NP V              S+ G    + +E             G+  H        
Sbjct: 148 SFRVNPMVGAGHHDHCITGGVMSKFGIMDNEAVEVYQFAEDLGFTPVGMHSHIGSGILDP 207

Query: 173 LCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPV--------KDFCQRLKE 220
             F   +++     G          E++  GGG+                 K+     K 
Sbjct: 208 EPFKLAIESTIDIAGKVHTEAGIDFEFVDFGGGVGIPYTPEENIVDIDTFAKENIALFKS 267

Query: 221 FSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
             E++      +YLEPG  +V + + L T V  + ++ +  + VDS     +   +    
Sbjct: 268 KLEEHDLGKPTMYLEPGRYLVGDASVLLTRVNSVKQSYRKFLGVDSGFHTLLRPAMYDSY 327

Query: 278 SATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
              +  N           + G  C +GD+F        V+ GD ++  +   Y     + 
Sbjct: 328 HHIVLANKMDAPNTQEVDIAGNVCESGDLFARDRPMPDVEEGDLLAILNAGAYGFTMSSN 387

Query: 334 FNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           +N     +  +             ++ D +N 
Sbjct: 388 YNSRPKASEVLVKDGECFLTRERETFEDLFNK 419


>gi|192360548|ref|YP_001983745.1| diaminopimelate decarboxylase [Cellvibrio japonicus Ueda107]
 gi|190686713|gb|ACE84391.1| diaminopimelate decarboxylase [Cellvibrio japonicus Ueda107]
          Length = 415

 Score =  246 bits (627), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 59/384 (15%), Positives = 115/384 (29%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +        +      +    +  A+K  +   + + L +   G    S  E
Sbjct: 26  GTPCYVYSRAAFTQQYLSYAQALGSHPGMICYAIKANSNLAILNMLAKLGAGFDIVSGGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +              ++   K       A+          + ++L      A    K   
Sbjct: 86  LERVLYAGGNPSRIVFSGVGKSVQEMARALDVGIFCFNVESEAELELLAQVAADKGKVAN 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LR+NP V  +           ++ G   +       +        + GL  H   +  
Sbjct: 146 VSLRVNPDVDANTHPYISTGLKENKFGIAIERAPAVYARAAQLPSLAIKGLDCHIGSQLT 205

Query: 171 S---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEK 224
               FL     L  +  E       I  + LGGG+  T +D       +    +K     
Sbjct: 206 QLTPFLDALERLLLLIDELAAKGIHISHLDLGGGLGVTYRDETPPPVAEYMAAIKAKLGD 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQE---SAT 280
             + +  EPG +I  N   L T V+ +         ++D+++  ++   L          
Sbjct: 266 RPLALMFEPGRSISANAGVLLTQVMFLKPTEHKNFAVIDAAMNDNIRPSLYQAWQDIRPL 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                 P T  + G  C  GD  G+      ++ GD ++      Y  +  + +N     
Sbjct: 326 QQRGQAPKTWDLVGPICETGDFLGKGRELA-IEPGDLLAVMSAGAYGFSMSSNYNTRGRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              V + D         ++ D   
Sbjct: 385 AEVVVDGDQMHLVRARETFEDLIR 408


>gi|220919297|ref|YP_002494601.1| diaminopimelate decarboxylase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219957151|gb|ACL67535.1| diaminopimelate decarboxylase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 427

 Score =  246 bits (627), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 68/387 (17%), Positives = 127/387 (32%), Gaps = 26/387 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+     L  +              +  A+K  +   +     +   G    S  E
Sbjct: 26  GTPLYVYSTATLTRHWKVLHRSLAGLDHLVCYAVKANSNLAVLSLFARLGSGFDIVSGGE 85

Query: 63  VMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKL--HKK 117
           +    +     G+     V  +D E+   L +    +   +  +L +    A+++     
Sbjct: 86  LYRVLKAGGHPGKVVFSGVGKRDDEVAFALESGVKVLNVESAPELARISIVARRMGLRAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    +         +     V G+  H   +  
Sbjct: 146 VALRVNPDVDPKTHPYISTGLSENKFGVSVDEARRLYALAAQDPALEVRGVACHIGSQIT 205

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
           +   F   +  +    K+ G    ++  + +GGG+  T  D        + + +K+   +
Sbjct: 206 TVRPFLDAIARVLSLVKDLGKQGIRLGHVDVGGGLGITYADEEPPHPDEYGRAIKKALSR 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283
           +  ++ LEPG  +V N   L T VL + E+  K  V+VD+++   V     Y     I P
Sbjct: 266 FDGEVMLEPGRVLVGNAGVLVTRVLHVKESGRKVFVVVDAAMNDLVRPS-YYDAHHEIEP 324

Query: 284 NTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
              P          V G  C + D             GD +       Y     + +N  
Sbjct: 325 AGAPRKDAEEIVCDVVGPICESSDFLARKRRMPRPVRGDLLVVRSAGAYGFAMSSNYNSR 384

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
                 + + DG   A R  +Y D   
Sbjct: 385 PRAAEVLVDGDGARLARRRETYADLVR 411


>gi|330501238|ref|YP_004378107.1| diaminopimelate decarboxylase [Pseudomonas mendocina NK-01]
 gi|328915524|gb|AEB56355.1| diaminopimelate decarboxylase [Pseudomonas mendocina NK-01]
          Length = 415

 Score =  246 bits (627), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 57/384 (14%), Positives = 116/384 (30%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +                 +  A+K  +  G+ + L +   G    S  E
Sbjct: 26  GTPTYVYSRAHIEWQYRAYADALAGMPHLVCFAVKANSNIGVLNVLARLGAGFDIVSSGE 85

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++     +D    A+          +  +L + +  A +L     
Sbjct: 86  LERVLAAGGEPSRIVFSGVGKSRDDMRRALEVGVHCFNVESSVELERLQKVAAELGVKAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G   +          E    +V G+  H   +  
Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIDIEQAEAVYARAAELPNLDVIGVDCHIGSQLT 205

Query: 171 SFLCF---SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224
           +   F      L  +  +       I+ + LGGG+    +D       D+   +++    
Sbjct: 206 TLEPFLDALDRLLLLVDKLAERGITIKHLDLGGGLGVQYRDEQPPLAGDYIAAVRKRLAG 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280
             + +  EPG  IV N   L T V  +         IVD+++   +   L          
Sbjct: 266 RDLSLVFEPGRFIVANAGVLLTQVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVSPV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                      + G  C  GD   +      ++ GD ++      Y     + +N     
Sbjct: 326 QPREGEARNYDLVGPICETGDFLAKDRQLV-LEEGDLLAVRSAGAYGFVMSSNYNTRGRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + + +   +  R  +  + Y 
Sbjct: 385 AEVMVDGEQAFEVRRRETVQELYA 408


>gi|325300615|ref|YP_004260532.1| carboxynorspermidine decarboxylase [Bacteroides salanitronis DSM
           18170]
 gi|324320168|gb|ADY38059.1| carboxynorspermidine decarboxylase [Bacteroides salanitronis DSM
           18170]
          Length = 387

 Score =  246 bits (627), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 122/381 (32%), Positives = 190/381 (49%), Gaps = 17/381 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P Y++++  L  NL     + + AGV+++LA K FA W  F    +Y+  TT+SS+Y
Sbjct: 7   VPSPCYVMEEDLLRKNLSLIKSVAERAGVEIILAFKAFALWKSFPIFREYIRHTTASSVY 66

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIG 119
           E  L  E+FG + H Y+ AY D      L     I FN++SQ  +F  K  A       G
Sbjct: 67  EARLAFEEFGSKAHTYSPAYTDGNFADFLKYSSHITFNSLSQYGRFYPKVKASSEPVSCG 126

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +RINP  S  +  L +P  P +R G       +   + + G   H +CE+ S+      L
Sbjct: 127 IRINPEYSEVEVELYNPCAPGTRFGVTADLLPDRLPEGIEGFHCHCHCESSSYE-LERTL 185

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238
           K+IE++F  +  Q++W++LGGG   T KDY V+     L+    +Y   QI LEPG A  
Sbjct: 186 KHIEEKFACWFPQLKWLNLGGGHLMTRKDYDVEHLIGLLQGLKVRYPHLQIILEPGSAFA 245

Query: 239 TNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTG----------- 286
             T  L  +V+D+ E+      V D S   H+PD L       +                
Sbjct: 246 WQTGPLVASVVDVVESRGIRTAVLDVSFTCHMPDCLEMPYQPAVRGAESLPAEAVKTARP 305

Query: 287 -PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
             +   + G SCL+GD  G + F   +++G+RI FED+  Y + + N FNGI+ P+IA+ 
Sbjct: 306 DEHVYRLGGNSCLSGDYMGSWKFGHALQVGERIVFEDMIHYTMVKTNMFNGIHHPSIALC 365

Query: 346 NVDGTIKAIREFSYNDYYNNL 366
           + +G ++  R F Y DY + +
Sbjct: 366 HSNGELEVYRTFHYEDYRDRM 386


>gi|116053426|ref|YP_793751.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|254238026|ref|ZP_04931349.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa C3719]
 gi|296392135|ref|ZP_06881610.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa PAb1]
 gi|313106693|ref|ZP_07792911.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa 39016]
 gi|115588647|gb|ABJ14662.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126169957|gb|EAZ55468.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa C3719]
 gi|310879413|gb|EFQ38007.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa 39016]
          Length = 415

 Score =  246 bits (627), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 61/384 (15%), Positives = 119/384 (30%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +                 +  A+K  +  G+ + L +   G    S  E
Sbjct: 26  GTPTYVYSRAHIEAQYRAYADALAGMPHLVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++     +D    A+          +  +L + +  A +L     
Sbjct: 86  LERVLAAGGDPAKVVFSGVGKTRDDMRRALEVGVHCFNVESGEELERLQRVAAELGVKAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    +         E +   V G+  H   +  
Sbjct: 146 VSLRVNPDVDAQTHPYISTGLKENKFGIAIDEAEAVYARAAELDHLEVIGVDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224
               F   L+    +          I  + LGGG+    +D       D+ + ++E    
Sbjct: 206 QLEPFLDALERLLGLVDRLAGKGIGIRHLDLGGGLGVRYRDEQPPLAGDYIRAIRERLHG 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQE---SAT 280
             + +  EPG +IV N   L T V  +         IVD+++   +   L        A 
Sbjct: 266 RDLTLVFEPGRSIVANAGVLLTRVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVQAV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              +  P    + G  C  GD   +      +  GD ++      Y     + +N     
Sbjct: 326 RPRDAVPRRYDLVGPICETGDFLAKDRDLA-LAEGDLLAVRSAGAYGFVMSSNYNTRGRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + + + T +  R  +  + Y 
Sbjct: 385 AEVLVDGEQTHEVRRRETVQELYA 408


>gi|330878499|gb|EGH12648.1| diaminopimelate decarboxylase [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 415

 Score =  246 bits (627), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 61/383 (15%), Positives = 121/383 (31%), Gaps = 23/383 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +                 +  A+K  +  G+ + L +   G    S  E
Sbjct: 26  GTPTYVYSRAHIEAQYRAFADALSGMPHMVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH--KK 117
           +          E   ++     ++    A+          +  +L + ++ A +L+    
Sbjct: 86  LERVLAAGGKAERIVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQEVAAELNVRAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           I LR+NP V              ++ G       +  I+        V G+  H   +  
Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAEDVYIRASQLPNLEVIGVDCHIGSQLT 205

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
           +   F   L    ++    G     +  I LGGG+    +D         +K   E+ + 
Sbjct: 206 TLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGLGVRYRDEVPPLAGDYIKAVRERLAG 265

Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280
           +   +  EPG  IV N   L T V  +         IVD+++   +   L        A 
Sbjct: 266 RDLGLLFEPGRFIVANAGVLLTQVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVTAV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              ++ P    + G  C  GD   +      +  GD ++      Y     + +N     
Sbjct: 326 RPRDSEPRAYDIVGPICETGDFLAKGRELA-LAEGDLLAVHSAGAYGFVMSSNYNTRGRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYY 363
              + +     +  R  +  + +
Sbjct: 385 AEVLVDGTQAFEVRRRETVAELF 407


>gi|2499347|sp|O05321|DCDA_PSEFL RecName: Full=Diaminopimelate decarboxylase; Short=DAP
           decarboxylase
 gi|1929094|emb|CAA72943.1| LysA protein [Pseudomonas fluorescens]
          Length = 416

 Score =  245 bits (626), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 61/385 (15%), Positives = 120/385 (31%), Gaps = 24/385 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +     T     +     +  A+K  +  G+ + L +   G    S  E
Sbjct: 26  GTPTYVYSRAHIEAQYRTFADALEGMPHLVCFAVKANSNLGVLNVLARLGAGFDIVSGGE 85

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQ-LNKFKDKAQKL--HK 116
           +          +   ++     ++    A+          +  +  ++ +  A +L    
Sbjct: 86  LERVLAAGGSADKIVFSGVGKTREDMRRALEVGVHCFNIESTDELGSRLQIVAAELGVRA 145

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCEN 169
            I LR+NP V              ++ G    D         +     V G+  H   + 
Sbjct: 146 PISLRVNPDVDAGTHPYISTGLKENKFGIAIADAEDVYVRAAQLPNLEVLGVDCHIGSQL 205

Query: 170 KSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226
            +   F   L     +    G     +  I LGGG+    +D         +K   E+  
Sbjct: 206 TTLEPFIDALDRLLALVDRLGDCGIYLRHIDLGGGVGVRYRDEEPPLVADYIKAVRERLD 265

Query: 227 VQ---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279
            +   +  EPG  IV N   L T V  +         IVD+++   +   L        A
Sbjct: 266 GRDLALMFEPGRYIVANAGVLLTQVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVTA 325

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
               +T   +  + G  C  GD   +      ++ GD ++      Y     + +N    
Sbjct: 326 VRPRDTAARSYDIVGPICETGDFLAKGRELA-LEEGDLLAVHSAGAYGFVMSSNYNTRGR 384

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
               + + D   +  R  +  + + 
Sbjct: 385 CAEVLVDGDQAFEVRRRETVAELFA 409


>gi|307546848|ref|YP_003899327.1| diaminopimelate decarboxylase [Halomonas elongata DSM 2581]
 gi|307218872|emb|CBV44142.1| diaminopimelate decarboxylase [Halomonas elongata DSM 2581]
          Length = 429

 Score =  245 bits (626), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 69/387 (17%), Positives = 121/387 (31%), Gaps = 28/387 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  K  L  +              +  A+K  A   +   L +   G    S+ E
Sbjct: 26  GTPCYVYSKATLARHFRAYTEALGGHPHLICYAVKANANLAVLGLLARLGAGFDIVSVGE 85

Query: 63  VMLGH-EKFGGETHAYNV-AYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +              ++  A ++ E+  A+          + ++L +    A+ L K   
Sbjct: 86  LERVLVAGGDPAKVVFSGVAKQENEMARALEVGIKCFNVESRAELERLDAVARGLGKVAS 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G          +     +   V GL  H   +  
Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKDNKFGIPVDEAFEVYRQAAGMDNVRVAGLDCHIGSQLT 205

Query: 171 ---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR-------LKE 220
               FL     L  + ++      ++E + LGGG+    +D                L  
Sbjct: 206 ELSPFLDALDRLLALLEQLRDAGIEVEHLDLGGGLGVPYQDENPPQPFDYATSLLERLSR 265

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESA 279
           +     + +  EPG +I  N   L T V  +     KN  IVD+++   +   L     A
Sbjct: 266 WPGSERLTLLFEPGRSIAANAGVLLTRVEFLKPGETKNFAIVDAAMNDLIRPALYQAWQA 325

Query: 280 TI----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
            +           T  V G  C  GD  G+      +  GD ++      Y     + +N
Sbjct: 326 ILPVDTRQPRETDTYDVVGPVCETGDFLGKQRRLA-IAAGDLLAVRSAGAYGFVMASNYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDY 362
               P   + + D      R     D 
Sbjct: 385 SRPRPPEVMVDGDRMHLVRRRERLEDL 411


>gi|256829250|ref|YP_003157978.1| diaminopimelate decarboxylase [Desulfomicrobium baculatum DSM 4028]
 gi|256578426|gb|ACU89562.1| diaminopimelate decarboxylase [Desulfomicrobium baculatum DSM 4028]
          Length = 423

 Score =  245 bits (626), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 77/384 (20%), Positives = 121/384 (31%), Gaps = 22/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+     L  +                 ++K  +       L Q   GT   S  E
Sbjct: 26  GTPLYIYSATTLKRHYKAFDSAFDGIDHLTCYSVKANSNLSFLKILAQEGAGTDIVSGGE 85

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
           +          +   Y+   K           D       +V +L +  D A  + K   
Sbjct: 86  LFRALRAGVDPKKIVYSGVGKKTVEIQEALFADILMFNVESVQELERINDVAGGVDKVAR 145

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-----KNVN--GLMFHNNCENK 170
             LRINP V              ++ G    D +++        NV   G+  H   +  
Sbjct: 146 VSLRINPDVDPKTHPYVSTGLKENKFGLSRADALKAYALAQSLPNVEPIGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEK 224
               F   L+ +++  G       +I+++ LGGG+  T  +       +    L E  + 
Sbjct: 206 QLSPFMEALEKLKEFHGQLVQMGIKIKYMDLGGGLGITYNEEAPPHPEELGKALIESLKG 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             V + LEPG  I  NT  L T V        K  VIVD+++   V   L          
Sbjct: 266 LDVTLILEPGRVIAGNTGILVTEVQYTKTNEDKTFVIVDAAMNDLVRPSLYGSYHRIASV 325

Query: 284 NTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
             G     TA V G  C +GD   +      V  GD ++      Y     + +N     
Sbjct: 326 REGNGEEMTADVVGPICESGDFLAKNRTFPKVAQGDLLAAFSAGAYGFVMSSQYNSRARA 385

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              +   D  +   +   YND   
Sbjct: 386 AEIMVEGDKHVLVRKREVYNDLVA 409


>gi|303325938|ref|ZP_07356381.1| carboxynorspermidine decarboxylase [Desulfovibrio sp. 3_1_syn3]
 gi|302863854|gb|EFL86785.1| carboxynorspermidine decarboxylase [Desulfovibrio sp. 3_1_syn3]
          Length = 407

 Score =  245 bits (626), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 124/395 (31%), Positives = 205/395 (51%), Gaps = 30/395 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM----DGTTS 57
           + +P +++D+ +L  N      +++  G K+LLALK +AAW  F  L++       G  +
Sbjct: 14  VPSPCFVLDEARLAANAAILDEVQRRTGAKILLALKGYAAWATFPLLSRTGVGPLWGVCA 73

Query: 58  SSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK- 116
           SS+ E  LG E+FGGE HA+  A+ + EI  +L   D I+FN+ +Q  +F+   +  ++ 
Sbjct: 74  SSVDEARLGREEFGGEVHAFAAAWTEAEIAELLDLADHIVFNSPTQWRQFRPVIEAHNRA 133

Query: 117 -------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN 169
                  + GLR+NP  S     + DP  P SRLG + +    ++++ ++GL FH  CE 
Sbjct: 134 RRAENPIECGLRLNPEHSEGAVPIYDPCSPGSRLGIRQRHFDPADLEGISGLHFHTLCEQ 193

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
                 +  L  +E++FG ++    WI++GGG H T   Y +   C  L  + ++Y  +I
Sbjct: 194 G-ADALARTLDVVEEKFGPYLPACRWINMGGGHHITKPGYDLDLLCACLTRWRQRYDARI 252

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----- 284
           YLEPGEA+  N   L  TVLD+      + ++D S   H+PD L       ++       
Sbjct: 253 YLEPGEAVALNAGWLTATVLDVVMADMPVAVLDVSAACHMPDVLEMPYRPEVFYRHEGAT 312

Query: 285 -------TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                     +T  + G+SCLAGD+ GE+ F  P++ G R+ F D+A Y++ +   FNG+
Sbjct: 313 ARAGAAGEQAWTCRLAGKSCLAGDVIGEYGFAAPLEAGQRLVFGDMAIYSMVKTTTFNGL 372

Query: 338 NMPTIAVKN-----VDGTIKAIREFSYNDYYNNLS 367
            +P+I +        +   + +REF Y D+ N LS
Sbjct: 373 RLPSIGICKAGNASGENRFRLLREFGYADFRNRLS 407


>gi|269103729|ref|ZP_06156426.1| diaminopimelate decarboxylase [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163627|gb|EEZ42123.1| diaminopimelate decarboxylase [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 417

 Score =  245 bits (626), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 64/383 (16%), Positives = 119/383 (31%), Gaps = 24/383 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  +   + + L +   G    SL E
Sbjct: 27  GTPLYVYSRATLERHWQAFDRAVASHPHLICYAVKANSNLAVLNVLAKLGSGFDIVSLGE 86

Query: 63  V-MLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +  +           ++   K       A+          +  +L +    A +L     
Sbjct: 87  LERVIAAGGDPSKVVFSGVGKTVAEMTRALSLGIKCFNVESEPELERLNQVAAELGVIAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNC--- 167
           I LRINP V              ++ G   +  ++           NV G+  H      
Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGITFERALDVYRLAHRLPNLNVVGMDCHIGSQLT 206

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
           E   F+     L ++          I  + +GGG+  T        P       L+  ++
Sbjct: 207 EITPFIDAVDRLLSLIDTLADEGITIAHLDVGGGLGVTYDQEQPPEPSDYAIALLERLNQ 266

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATI- 281
              +++  EPG AI  N   L T V  +     KN  IVD+++   +   L     A I 
Sbjct: 267 YPELELIFEPGRAIAANAGILLTRVEYLKHSEYKNFAIVDAAMNDLIRPTLYSAWQAIIP 326

Query: 282 --YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                    T  + G  C  GD  G       ++  D ++      Y     + +N    
Sbjct: 327 ASPRQGEMQTYDIVGPICETGDFIGRDRQLA-LEPNDLLAVRSAGAYGFVMASNYNTRAR 385

Query: 340 PTIAVKNVDGTIKAIREFSYNDY 362
               + + + +    +  +    
Sbjct: 386 AAEVMVDGEQSYLVRQRETLQQL 408


>gi|114561631|ref|YP_749144.1| diaminopimelate decarboxylase [Shewanella frigidimarina NCIMB 400]
 gi|114332924|gb|ABI70306.1| diaminopimelate decarboxylase [Shewanella frigidimarina NCIMB 400]
          Length = 414

 Score =  245 bits (626), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 67/382 (17%), Positives = 118/382 (30%), Gaps = 23/382 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  +   + + L +   G    S  E
Sbjct: 26  GTPLYIYSRATLERHWHAFNNAVADHPHLICYAVKANSNLAVLNVLARLGSGFDIVSGGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +          +   ++   K       A+          + ++L +  + A +L K   
Sbjct: 86  LSRVLQAGGDPKKVVFSGVGKTVAEMEQALNIGIYCFNVESSAELEQLNEVASRLGKVAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNC--- 167
           + LRINP V              ++ G   ++         E    +V G+  H      
Sbjct: 146 VSLRINPDVDAGTHPYISTGLKENKFGIAMEEAEVVFARAAELAHLHVKGVDCHIGSQLT 205

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
           E K FL     +  +    G    QIE   +GGG+  T           +   L E    
Sbjct: 206 EIKPFLDAMDRMLALIDRLGEQGIQIEHFDVGGGLGVTYNSETPPHPDAYAAALLERLNG 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++  EPG AI  N     T VL +   + K   IVD ++   +   L       I  
Sbjct: 266 RKLKLIFEPGRAIAANAGIFVTQVLYLKENSDKRFAIVDGAMNDLIRPSLYSAWQNIIPV 325

Query: 284 NTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                      + G  C  GD  G+      VK GD ++      Y     + +N     
Sbjct: 326 QQNDAPTFAYDIVGPVCETGDFLGKDRQLA-VKSGDLLAIRSSGAYGFAMASNYNSRPRV 384

Query: 341 TIAVKNVDGTIKAIREFSYNDY 362
              + +        +  +    
Sbjct: 385 AEIMVDGGNDFVVRQRETLEQL 406


>gi|49088246|gb|AAT51548.1| PA5277 [synthetic construct]
          Length = 416

 Score =  245 bits (626), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 61/384 (15%), Positives = 119/384 (30%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +                 +  A+K  +  G+ + L +   G    S  E
Sbjct: 26  GTPTYVYSRAHIEAQYRAYADALAGMPHLVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++     +D    A+          +  +L + +  A +L     
Sbjct: 86  LERVLAAGGDPAKVVFSGVGKTRDDMRRALEVGVHCFDVESGEELERLQRVAAELGVKAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    +         E +   V G+  H   +  
Sbjct: 146 VSLRVNPDVDAQTHPYISTGLKENKFGIAIDEAEAVYARAAELDHLEVIGVDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224
               F   L+    +          I  + LGGG+    +D       D+ + ++E    
Sbjct: 206 QLEPFLDALERLLGLVDRLAGKGIGIRHLDLGGGLGVRYRDEQPPLAGDYIRAIRERLHG 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQE---SAT 280
             + +  EPG +IV N   L T V  +         IVD+++   +   L        A 
Sbjct: 266 RDLTLVFEPGRSIVANAGVLLTRVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVQAV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              +  P    + G  C  GD   +      +  GD ++      Y     + +N     
Sbjct: 326 RPRDAAPRRYDLVGPICETGDFLAKDRDLA-LAEGDLLAVRSAGAYGFVMSSNYNTRGRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + + + T +  R  +  + Y 
Sbjct: 385 AEVLVDGEQTHEVRRRETVQELYA 408


>gi|148925677|ref|ZP_01809365.1| putative decarboxylase [Campylobacter jejuni subsp. jejuni CG8486]
 gi|145845687|gb|EDK22778.1| putative decarboxylase [Campylobacter jejuni subsp. jejuni CG8486]
          Length = 382

 Score =  245 bits (626), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 138/376 (36%), Positives = 212/376 (56%), Gaps = 18/376 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TP Y++++ KL  N +    + + +G K+LLALK FA  G    + +Y+ G T S L+
Sbjct: 6   IQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSGLW 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E     E    E H Y+ A+K+ EI  + S    I+FN+++Q +KF+  A+     +GLR
Sbjct: 66  EAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQ--AKTQKNSLGLR 123

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
            N   S +   L +P   +SRLG + KD    ++  + GL FH  CE +S     A+LK 
Sbjct: 124 CNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLNAIEGLHFHALCE-ESADALEAVLKA 182

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            E++FG +I Q++W++ GGG H T K Y V+      K FS+KY VQ+YLEPGEA+   T
Sbjct: 183 FEEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKYGVQVYLEPGEAVGWQT 242

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP---------------NTG 286
             L  +V+DI EN K + I+D+S EAH+PD ++   ++ +                    
Sbjct: 243 GNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKISDLKES 302

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
            ++ ++ G +CLAGD+ GE+ F+K +KIGD+I F D   Y I +   FNGI +P + + +
Sbjct: 303 EFSYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIHYTIVKNTTFNGIRLPNLMLLD 362

Query: 347 VDGTIKAIREFSYNDY 362
               ++ IREFSY DY
Sbjct: 363 RKNELQMIREFSYKDY 378


>gi|304382240|ref|ZP_07364747.1| carboxynorspermidine decarboxylase [Prevotella marshii DSM 16973]
 gi|304336597|gb|EFM02826.1| carboxynorspermidine decarboxylase [Prevotella marshii DSM 16973]
          Length = 391

 Score =  245 bits (626), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 120/381 (31%), Positives = 189/381 (49%), Gaps = 17/381 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y++++++L  NL     + K A V+++LA K FA W  F     Y+DGTT+SSL 
Sbjct: 11  VHTPIYILEEERLRTNLQLIARVAKEADVEVILAFKAFALWKTFPIFRAYIDGTTASSLN 70

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIG 119
           E +L + +FG   H ++ AY D EI  +    D + FN++SQ  ++    KA      +G
Sbjct: 71  EALLAYREFGARAHTFSPAYTDDEIGEIARCSDILTFNSLSQYCRYATAAKAAHPDVSLG 130

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           LR+NP  S     L +P    +R G       E     + G   H +CE+     F   L
Sbjct: 131 LRVNPEYSEVGTALYNPCAEGTRFGVSADKLPEHLPDGIEGFHCHCHCESG-ADVFVRTL 189

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238
            +IE +F  +  Q++W++ GGG   T +DY V    + L+ F  +Y    + LEPG A  
Sbjct: 190 AHIETQFSPWFGQLKWMNFGGGHLMTRRDYDVPLLVETLRGFHRRYPHLHVILEPGSAFA 249

Query: 239 TNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTGPYT-------- 289
             T  L + V+DI E+      + + S   H+PD L       +                
Sbjct: 250 WETGVLVSQVVDIVEDHGIKTAILNVSFTCHMPDCLEMPYQPAVRGAETLPPDAAAHCAP 309

Query: 290 ----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
                 + G SCL+GD  G + FE+P+ +GD + FED+  Y   + + FNGI+ P+IA+ 
Sbjct: 310 EAPVYRLGGNSCLSGDFMGSWLFERPLSVGDNVIFEDMLHYTTVKTHMFNGISHPSIALL 369

Query: 346 NVDGTIKAIREFSYNDYYNNL 366
           + DG ++ +R F+Y DY N +
Sbjct: 370 HADGELEMLRVFTYEDYKNRM 390


>gi|261349779|ref|ZP_05975196.1| diaminopimelate decarboxylase [Methanobrevibacter smithii DSM 2374]
 gi|288860563|gb|EFC92861.1| diaminopimelate decarboxylase [Methanobrevibacter smithii DSM 2374]
          Length = 427

 Score =  245 bits (626), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 64/392 (16%), Positives = 123/392 (31%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ID+ ++ +N +             ++  A K      +   L        + S 
Sbjct: 28  GTPTYVIDENRIRDNYNRFYNAFSKYYPDFRVYYACKANTNLAVMRILESEGCCIDAVSP 87

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKI 118
            EV    +  F GE   +       E    ++     +  ++VS L +  +       KI
Sbjct: 88  GEVYTSKKLGFPGERILFTGNNVTTEELKFVAEQGAVLNLDSVSALKRLAEVVDPEGFKI 147

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSF 172
             R+NP V              S+ G    + +E             G+  H        
Sbjct: 148 SFRVNPMVGAGHHDHCITGGVMSKFGIMDNEAVEVYQFAEDLGFTPVGMHSHIGSGILDP 207

Query: 173 LCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPV--------KDFCQRLKE 220
             F   +++     G          E++  GGG+                 K+     K 
Sbjct: 208 EPFKLAIESTIDIAGKVHTEAGIDFEFVDFGGGVGIPYTPEENIVDIDTFAKENIALFKS 267

Query: 221 FSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
             E++      +YLEPG  +V + + L T V  + ++ +  + VDS     +   +    
Sbjct: 268 KLEEHDLGKPTMYLEPGRYLVGDASVLLTRVNSVKQSYRKFLGVDSGFHTLLRPAMYDSY 327

Query: 278 SATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
              +  N           + G  C +GD+F        V+ GD ++  +   Y     + 
Sbjct: 328 HHIVLANKMDAPNTQEVDIAGNVCESGDLFARDRPMPNVEEGDLLAILNAGAYGFTMSSN 387

Query: 334 FNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           +N     +  +             ++ D +N 
Sbjct: 388 YNSRPKASEVLVKDGECFLTRERETFEDLFNK 419


>gi|46580057|ref|YP_010865.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46449473|gb|AAS96124.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311233943|gb|ADP86797.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris RCH1]
          Length = 412

 Score =  245 bits (625), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 67/382 (17%), Positives = 117/382 (30%), Gaps = 22/382 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+     L  +          A      ++K  +   +   L     G    S  E
Sbjct: 26  GTPLYVYSAGTLERHYRAFDSAFGKAAHLTCFSVKACSNIHILKLLGSLGAGVDIVSGGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
           +         G    Y+   K  +        D       ++ +L   ++ A  +     
Sbjct: 86  LHRALLAGIPGRRIVYSGVGKRPDEIRSALEADILMFNVESLQELRTIEEVAASMGTTAR 145

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-----KNVN--GLMFHNNCENK 170
             LRINP V              ++ G +    +E  +      +++  G+  H   +  
Sbjct: 146 VSLRINPDVDPHTHPYISTGLQKNKFGIEMTQALEGYMLARDLPHIDPIGIDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--- 224
           S   F   L       +        I ++ LGGG+  T  +          +   E+   
Sbjct: 206 SLSPFLEALDKVLEFREHLSILGLDISYLDLGGGLGITYGEETPPHPRDFGRAVLERTKG 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQES---AT 280
            ++ + LEPG  I  N   L T VL       K  VIVD+++   V   L          
Sbjct: 266 LNLTLVLEPGRVIAGNAGILVTEVLYTKTTPSKQFVIVDAAMNDLVRPSLYASYHRIAEV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
           +       T  V G  C +GD          V+ G+ ++      Y  +  + +N     
Sbjct: 326 LPHGRTEQTVDVVGPICESGDFLARDRVLPAVEQGELLAVFSAGAYGFSMSSQYNSRPRA 385

Query: 341 TIAVKNVDGTIKAIREFSYNDY 362
              +   D      R  +Y+D 
Sbjct: 386 AEVLVRGDTAKSIRRRETYDDL 407


>gi|93006328|ref|YP_580765.1| Orn/DAP/Arg decarboxylase 2 [Psychrobacter cryohalolentis K5]
 gi|92394006|gb|ABE75281.1| Orn/DAP/Arg decarboxylase 2 [Psychrobacter cryohalolentis K5]
          Length = 414

 Score =  245 bits (625), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 196/399 (49%), Positives = 254/399 (63%), Gaps = 34/399 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TPYYL+D+  ++ N+     + + +G K LLALKCFA WG+FD +  Y+ GTTSSSL E
Sbjct: 16  PTPYYLLDEAAIVANMQIIARLCELSGAKALLALKCFATWGVFDIMQPYLHGTTSSSLNE 75

Query: 63  VMLGHEKFGG----------ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112
           V LG+E FG           ETHAY+VAY   E+  VLS  D IIFN++SQLN FKD+A 
Sbjct: 76  VRLGYETFGKNSNASSKDKKETHAYSVAYSADEMPEVLSYADKIIFNSISQLNVFKDQAA 135

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF 172
             +  +GLR+NP  S S FI+ADP RPFSRLGE  KDKI + + +++G+M HNNCEN SF
Sbjct: 136 AQNIPVGLRLNPKTSNSSFIIADPARPFSRLGEHDKDKIAAVLSDISGVMIHNNCENDSF 195

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232
             FS  L +IE  FG  + Q+EW+SLGGGIHF   +YP++    RLK FSEKY VQ+YLE
Sbjct: 196 EAFSESLADIETRFGDVLQQLEWVSLGGGIHFIAPNYPLEKLADRLKGFSEKYGVQVYLE 255

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----------- 281
           PGEA +    TL T+VLD   N KNL +VDSS+EAH+ D L+Y+ESA I           
Sbjct: 256 PGEASIHGAGTLVTSVLDTMHNEKNLAVVDSSIEAHMLDLLIYRESAPITAVNSDLINIA 315

Query: 282 -------------YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
                                 ++ GRSCLAGDIFGE+     +K+GD ++F + AGY +
Sbjct: 316 SLDIDPTNIAPISENAKSADNTIIYGRSCLAGDIFGEYALPNKLKVGDTVTFGNAAGYTM 375

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367
            +KNWFNG+NMP I ++ +DG+I   REF Y DY  +LS
Sbjct: 376 VKKNWFNGVNMPAIVIRRLDGSIDIQREFDYQDYKASLS 414


>gi|333030061|ref|ZP_08458122.1| carboxynorspermidine decarboxylase [Bacteroides coprosuis DSM
           18011]
 gi|332740658|gb|EGJ71140.1| carboxynorspermidine decarboxylase [Bacteroides coprosuis DSM
           18011]
          Length = 377

 Score =  245 bits (625), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 121/368 (32%), Positives = 179/368 (48%), Gaps = 7/368 (1%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y++D+  L  NL+    +   AG++++LA K FA W  F    +Y+  +T+SS YE  
Sbjct: 10  PCYIMDESLLRKNLEKIKGVADTAGIEIILAFKSFALWRTFPIFREYIGHSTASSKYEAR 69

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
           +  E FG + H Y+ AY D +   ++   D I FN+++Q  +F  K  +     GLRINP
Sbjct: 70  MALETFGSKAHTYSPAYTDEDFHEIMRCSDHITFNSLTQYERFYRKTLEHDITCGLRINP 129

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S  +  L +P  P SR G       E   + + G   H  CE+ S+     ++  IE+
Sbjct: 130 EYSEVENDLYNPCAPGSRFGVIQSQMPEKLPEGIEGFHCHTLCESNSYDFERTLVY-IER 188

Query: 185 EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNTTT 243
            F  +  QI+WI+ GGG   T KDY  +     LK F  +Y    + +EPG A    T  
Sbjct: 189 NFSKWFDQIKWINFGGGHLMTQKDYNREHLIGVLKGFKARYPHLHVIMEPGSAFTWQTGV 248

Query: 244 LNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT----GPYTAMVCGRSCL 298
           L + V+DI         IV+ S   H+PD L       I        GPY   + G SCL
Sbjct: 249 LTSKVVDIVENKGIKTAIVNVSFTCHMPDTLEMPYQPVITDAKIGNDGPYIYRIGGNSCL 308

Query: 299 AGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFS 358
           +GD  G + F K +K+GD + FED+  Y   +   FNGI+ P I +   D     ++ F+
Sbjct: 309 SGDWMGNWSFNKELKVGDVVVFEDMIHYTTVKTTMFNGIHHPHIGLWTKDNKALVMKHFT 368

Query: 359 YNDYYNNL 366
           Y DY N +
Sbjct: 369 YGDYLNRM 376


>gi|78486188|ref|YP_392113.1| diaminopimelate decarboxylase [Thiomicrospira crunogena XCL-2]
 gi|78364474|gb|ABB42439.1| diaminopimelate decarboxylase [Thiomicrospira crunogena XCL-2]
          Length = 418

 Score =  245 bits (625), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 60/383 (15%), Positives = 121/383 (31%), Gaps = 24/383 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +Q   +               +  A+K  +   + + L +   G    S  E
Sbjct: 29  GTPLYVYSRQAFEDRWREFDQAFGRQPHLVCYAVKTNSNIAILNLLARLGSGFDIVSQGE 88

Query: 63  VMLG-HEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +              ++           A+          + ++L++ +  A+KL+K   
Sbjct: 89  LERVLRAGGDPSKVVFSGVAKKSSEIERALTVGIRCFNVESHAELDRIQAVAKKLNKIAP 148

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNC--- 167
           I +R+NP V              ++ G           D       ++ G+  H      
Sbjct: 149 ISIRVNPDVDAKTHPYISTGLKDNKFGVDINTAPALYADAQALSHIDIIGIDCHIGSQLT 208

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK---EFSEK 224
           E   F+     +  ++K        I  + LGGG+     D    +    ++   +  + 
Sbjct: 209 EITPFVDALDRVLELKKTLTDQGINIHHLDLGGGLGIQYTDETPPEIADYIQALMKKLDD 268

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESAT--- 280
            S+++ +EPG AI  N   L T V  +         I+D+++   +   L          
Sbjct: 269 PSIEVIIEPGRAIAGNAGVLVTEVEYLKPTEHKNFAIIDAAMNDLIRPALYQSHQTIQPV 328

Query: 281 -IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
               +       + G  C  GD  G+      +K GD ++      Y     + +N    
Sbjct: 329 TPRTDGEDVEWDLVGPVCETGDFLGKQRKL-NLKAGDYLAVMSSGAYGFTMSSNYNTRTR 387

Query: 340 PTIAVKNVDGTIKAIREFSYNDY 362
               + +     +     +YND 
Sbjct: 388 AAEILVDHKQAYEIRPRETYNDL 410


>gi|82701675|ref|YP_411241.1| diaminopimelate decarboxylase [Nitrosospira multiformis ATCC 25196]
 gi|82409740|gb|ABB73849.1| diaminopimelate decarboxylase [Nitrosospira multiformis ATCC 25196]
          Length = 418

 Score =  245 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 61/383 (15%), Positives = 113/383 (29%), Gaps = 24/383 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y   +  L                 +  A+K  +  G+ + L +   G    S  E
Sbjct: 29  GTPCYAYSRAALTTAYCEFDDAFAGRDHLVCYAVKANSNLGILNLLARLGSGFDIVSGGE 88

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +          +   ++           A+ +        + ++L+     A ++ K   
Sbjct: 89  LQRVLKAGGDPQKIVFSGVGKQPAEMKAALEAGILCFNVESEAELHGLNRVAGEMGKVAP 148

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    +               V GL  H   +  
Sbjct: 149 VSLRVNPDVDAKTHPYISTGLKENKFGIPFDEAEALYASAQALGNVRVAGLDCHIGSQLT 208

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224
               F    K +            +IE + LGGG+             ++ + L+     
Sbjct: 209 ELAPFIETCKKMLGLLDRLEAQGLEIEHLDLGGGLGIRYAGENPPSAREYVEALRSVVGN 268

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATI-- 281
              +I +EPG ++V N   L TTV  +         IVD+++   +   L       +  
Sbjct: 269 RRQKILIEPGRSLVGNAGVLLTTVEYLKPTPHRDFAIVDAAMNDLMRPALYKAYHEILPV 328

Query: 282 --YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                    T  V G  C  GD  G       +  GD ++      Y ++  + +N    
Sbjct: 329 VARNEMDAKTYQVVGPVCETGDFLGHDRHLA-LAQGDLLAVMSAGAYGMSMSSNYNARPR 387

Query: 340 PTIAVKNVDGTIKAIREFSYNDY 362
               + + D         S    
Sbjct: 388 AAEVMIDGDRIHLIRERESVEQL 410


>gi|297539787|ref|YP_003675556.1| diaminopimelate decarboxylase [Methylotenera sp. 301]
 gi|297259134|gb|ADI30979.1| diaminopimelate decarboxylase [Methylotenera sp. 301]
          Length = 416

 Score =  245 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 65/385 (16%), Positives = 122/385 (31%), Gaps = 25/385 (6%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP Y+  K  L    ++     K+    +  A+K   +  + +   +   G    S  E+
Sbjct: 27  TPCYVYSKSALTQAFESFSAGFKDCDHLVCFAVKANPSLAILNLFAKLGAGFDIVSGGEL 86

Query: 64  MLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--KI 118
                     +   ++   K         N D       + S+L +  D A  + K   I
Sbjct: 87  ARVLAAGGDPKKIVFSGVGKTEAEMQAALNADIFCFNVESASELQRLNDVASFMGKVAPI 146

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENKS 171
            LR+NP+V              ++ G   +D ++            ++G+  H   +   
Sbjct: 147 SLRVNPNVDAKTHPYISTGLKNNKFGVAYEDALDIYLQAAKMSNIAIHGVDCHIGSQITE 206

Query: 172 FLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEKY 225
              F      +             I+ I  GGGI     D    +   F   ++      
Sbjct: 207 LSPFLDAFDRVLALVDALAENGIVIQHIDAGGGIGICYSDETPPEFTVFATAMRAKLGSR 266

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES-----A 279
           +V++  EPG A+V N   L T V  +         IVD+++   +   L           
Sbjct: 267 NVKLVFEPGRALVGNAGVLLTKVEYLKHTESKNFAIVDAAMNDLMRPALYDAYHDIKAVQ 326

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
               +T   T  + G  C +GD  G       +  GD ++      Y ++  + +N    
Sbjct: 327 PRQDDTEALTYEIVGPVCESGDFLGHDRTLA-LVEGDILAIMSAGAYGMSMSSNYNTRPR 385

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
               + + D      +     D + 
Sbjct: 386 AAEVMVDGDQCHLIRKREQIADLFA 410


>gi|86149312|ref|ZP_01067543.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|85840094|gb|EAQ57352.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp.
           jejuni CF93-6]
          Length = 382

 Score =  245 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 140/376 (37%), Positives = 213/376 (56%), Gaps = 18/376 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TP Y++++ KL  N +    + + +GVK+LLALK FA  G    + +Y+ G T S L+
Sbjct: 6   IQTPAYILEEDKLRKNCELLASVSEKSGVKVLLALKGFAFSGAMKIVGEYLKGCTCSGLW 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E     E    E H Y+ A+K+ EI  + S    I+FN+++Q +KF+  A+     +GLR
Sbjct: 66  EAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQ--AKTQKNSLGLR 123

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
            N   S +   L +P   +SRLG + KD    ++  + GL FH  CE +S     A+LK 
Sbjct: 124 CNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLNVIEGLHFHALCE-ESADALEAVLKA 182

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            E++FG +I Q++W++ GGG H T K Y V+      K FS+KY VQ+YLEPGEA+   T
Sbjct: 183 FEEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKYGVQVYLEPGEAVGWQT 242

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP---------------NTG 286
             L  +V+DI EN K + I+D+S EAH+PD ++   ++ +                    
Sbjct: 243 GNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKISDLKES 302

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
            ++ ++ G +CLAGD+ GE+ F+K +KIGD+I F D   Y I +   FNGI +P + + N
Sbjct: 303 EFSYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIHYTIVKNTTFNGIRLPNLMLLN 362

Query: 347 VDGTIKAIREFSYNDY 362
               ++ IREFSY DY
Sbjct: 363 AKNELQMIREFSYKDY 378


>gi|11498406|ref|NP_069634.1| diaminopimelate decarboxylase (lysA) [Archaeoglobus fulgidus DSM
           4304]
 gi|8134392|sp|O29458|DCDA_ARCFU RecName: Full=Diaminopimelate decarboxylase; Short=DAP
           decarboxylase
 gi|2649806|gb|AAB90438.1| diaminopimelate decarboxylase (lysA) [Archaeoglobus fulgidus DSM
           4304]
          Length = 419

 Score =  245 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 73/390 (18%), Positives = 130/390 (33%), Gaps = 29/390 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  NL+       N G  LL A+K      +   +  +  G    S  E
Sbjct: 24  GTPVYVTSRALLERNLEAYKKAFSNEG--LLYAVKANNNLALMRIIASHGFGADVFSDGE 81

Query: 63  VMLG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKI 118
           + L     F  +   +N       EI+  ++       +++ +L      A++     +I
Sbjct: 82  LYLASLAGFRKDMVLFNGNSKSRKEIEMGVTAGVKFSVDSLDELRTISKIAKEVGKEVEI 141

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCENKS 171
             R+NP V              S+ G   +   E+    +        G+  H   +   
Sbjct: 142 AFRVNPDVDPKTHPKIATGLRESKFGIPHEMVREAYEMALKLDGVVPVGIHCHIGSQILD 201

Query: 172 FLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY--- 225
              F      + +I  +      ++ ++ +GGG+    +                ++   
Sbjct: 202 LSPFVHALNKVMDIAVDIEKLGVELSFVDMGGGLGIDYEGKGAPTPKDLASAILPEFEGR 261

Query: 226 ------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES- 278
                   Q++LEPG +IV NTT L T V  + +  KN V VD+     +   +      
Sbjct: 262 KADLTSDPQLWLEPGRSIVGNTTVLITRVNAVKKGYKNFVAVDAGFNVLIRPAMYGSYHR 321

Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
              A            V G  C +GD+         V++GD I+  D   Y     + +N
Sbjct: 322 VAVANKMDAEPEEVYTVVGPICESGDVLARDRKLPKVEVGDLIAVFDAGAYGFVMSSQYN 381

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           G       + + D       + SY D    
Sbjct: 382 GRPRCAEVLVSGDRWDVIREKESYGDLIEK 411


>gi|188996497|ref|YP_001930748.1| diaminopimelate decarboxylase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931564|gb|ACD66194.1| diaminopimelate decarboxylase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 419

 Score =  245 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 55/380 (14%), Positives = 125/380 (32%), Gaps = 22/380 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+++  K+ +L+ ++      K+    +  ALK  +   +     +   G    S  
Sbjct: 29  VGTPFFVYSKKAILDKINQYKEAFKDYDTLICYALKANSNLSLLKIFEENGVGADIVSGG 88

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116
           E+       F      Y    K       A+  N  +    +  +L+   + A  Q+   
Sbjct: 89  ELYKAKKAGFSSNKIVYAGVGKTDFEISYAISENILSFNVESFMELDVINEIAGKQEKKA 148

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            + +R+NP+V              S+ G      +++  K       NV G+  H   + 
Sbjct: 149 NVSIRVNPNVDPKTHPYISTGLKKSKFGIDIDQALDAYKKAAKLENLNVVGVHCHIGSQI 208

Query: 170 KSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF----CQRLKEFS 222
                F    +   ++  +      ++++I +GGG+                   +    
Sbjct: 209 MDISVFREAAEKVVDLVFKLKKEGIELKFIDMGGGLGVKYHPDDNPPTPKDLADAIIPVV 268

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATI 281
           ++  +++ +EPG +++     L T V+ + +  +   ++ DS +   V   +       +
Sbjct: 269 KQTGLKLIIEPGRSLIAEAGALITKVIFLKDKQEKHFVIVDSGMNDLVRPAMYNAYHHVL 328

Query: 282 YPNTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                     A + G  C  GD          V+ GD ++      Y  +  + +N    
Sbjct: 329 NVQEKDEEMIADIVGPICETGDFLALDRKIGKVERGDLLAIMTAGAYGSSMSSNYNVRPR 388

Query: 340 PTIAVKNVDGTIKAIREFSY 359
               + +            Y
Sbjct: 389 ALEVLVDGSNFKVIKEREDY 408


>gi|205356645|ref|ZP_03223407.1| putative decarboxylase [Campylobacter jejuni subsp. jejuni CG8421]
 gi|205345502|gb|EDZ32143.1| putative decarboxylase [Campylobacter jejuni subsp. jejuni CG8421]
          Length = 382

 Score =  245 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 139/376 (36%), Positives = 212/376 (56%), Gaps = 18/376 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TP Y++++ KL  N +    + + +G K+LLALK FA  G    + +Y+ G T S L+
Sbjct: 6   IQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSGLW 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E     E    E H Y+ A+K+ EI  + S    I+FN+++Q +KF+  A+     +GLR
Sbjct: 66  EAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQ--AKTQKNSLGLR 123

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
            N   S +   L +P   +SRLG + KD    ++  + GL FH  CE +S     A+LK 
Sbjct: 124 CNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLNAIEGLHFHALCE-ESADALEAVLKA 182

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            E++FG +I Q++W++ GGG H T K Y V+      K FS+KY VQ+YLEPGEA+   T
Sbjct: 183 FEEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKYGVQVYLEPGEAVGWQT 242

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP---------------NTG 286
             L  +V+DI EN K + I+D+S EAH+PD ++   ++ +                    
Sbjct: 243 GNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKISDLKES 302

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
            ++ ++ G +CLAGD+ GE+ F+K +KIGD+I F D   Y I +   FNGI +P + + N
Sbjct: 303 EFSYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIHYTIVKNTTFNGIRLPNLMLLN 362

Query: 347 VDGTIKAIREFSYNDY 362
               ++ IREFSY DY
Sbjct: 363 AKNELQMIREFSYKDY 378


>gi|57238538|ref|YP_179669.1| carboxynorspermidine decarboxylase [Campylobacter jejuni RM1221]
 gi|57167342|gb|AAW36121.1| carboxynorspermidine decarboxylase [Campylobacter jejuni RM1221]
 gi|315058969|gb|ADT73298.1| Carboxynorspermidine decarboxylase, putative [Campylobacter jejuni
           subsp. jejuni S3]
          Length = 382

 Score =  245 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 139/376 (36%), Positives = 212/376 (56%), Gaps = 18/376 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TP Y++++ KL  N +    + + +G K+LLALK FA  G    + +Y+ G T S L+
Sbjct: 6   IQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSGLW 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E     E    E H Y+ A+K+ EI  + S    I+FN+++Q +KF+  A+     +GLR
Sbjct: 66  EAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQ--AKTQKNSLGLR 123

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
            N   S +   L +P   +SRLG + KD    ++  + GL FH  CE +S     A+LK 
Sbjct: 124 CNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLNAIEGLHFHALCE-ESADALEAVLKA 182

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            E++FG +I Q++W++ GGG H T K Y V+      K FS+KY VQ+YLEPGEA+   T
Sbjct: 183 FEEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKYGVQVYLEPGEAVGWQT 242

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP---------------NTG 286
             L  +V+DI EN K + I+D+S EAH+PD ++   ++ +                    
Sbjct: 243 GNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKISDLKEN 302

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
            ++ ++ G +CLAGD+ GE+ F+K +KIGD+I F D   Y I +   FNGI +P + + N
Sbjct: 303 EFSYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIHYTIVKNTTFNGIRLPNLMLLN 362

Query: 347 VDGTIKAIREFSYNDY 362
               ++ IREFSY DY
Sbjct: 363 AKNELQMIREFSYKDY 378


>gi|291277519|ref|YP_003517291.1| diaminopimelate decarboxylase [Helicobacter mustelae 12198]
 gi|290964713|emb|CBG40568.1| diaminopimelate decarboxylase [Helicobacter mustelae 12198]
          Length = 412

 Score =  245 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 63/386 (16%), Positives = 121/386 (31%), Gaps = 24/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D +K+  N              +  ALK  +   +   + +   G    S+ E
Sbjct: 16  GTPLYVYDMEKIKANFLAYKDAFSGRKSLICYALKANSNLSVIKIIAELDGGADCVSIGE 75

Query: 63  VMLG-HEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           V              ++          +A+      I   + ++L + +  A++L     
Sbjct: 76  VKRAILAGIKPYRIIFSGVGKKDSEIKEALKIGILFINVESYAELLRVEAVAKELGSIAR 135

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           +  R+NP++              ++ G + ++                 G+ FH   +  
Sbjct: 136 ISVRVNPNIDPKTHPYISTGLSENKFGVEMEEARRMYLYAHKSDFLQPIGVHFHIGSQLT 195

Query: 171 SFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKD---YPVKDFCQRLKEFSEK 224
                +   + I             +++  +GGG+    KD   + + D+ Q +      
Sbjct: 196 QLDPIAQSTQKIADFARGLVAIGIDLKFFDVGGGVGICYKDEGVFDIHDYAQSILSKLSG 255

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP 283
             V I  EPG +IV N+  L T VL      K   ++ D ++   +   L          
Sbjct: 256 LDVTIICEPGRSIVGNSGYLVTQVLYEKHTPKKRFVIVDGAMNDLLRPSLYDAHHGVSVI 315

Query: 284 NTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
                      A V G  C + D   +     P+  GD + FE+   Y  +  + +N   
Sbjct: 316 KQRKEEGELSLADVVGPICESADFLAKNIELPPMHAGDFVIFENAGAYGFSMSSNYNTRG 375

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364
                    +G     R  S      
Sbjct: 376 RCAEVGVQKEGVFLLRRRESLEFLIR 401


>gi|146278482|ref|YP_001168641.1| diaminopimelate decarboxylase [Rhodobacter sphaeroides ATCC 17025]
 gi|145556723|gb|ABP71336.1| diaminopimelate decarboxylase [Rhodobacter sphaeroides ATCC 17025]
          Length = 421

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 57/392 (14%), Positives = 116/392 (29%), Gaps = 26/392 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +              +  A+K  +   +   L     G    S  
Sbjct: 25  VGTPFYCYSAATLERHYRLFTEALTPLPHMVCFAIKSLSNLAVLKLLGDLGAGMDVVSGG 84

Query: 62  EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116
           E +        GE   ++     ++    A+          +  ++    + A    L  
Sbjct: 85  EYLRARAAGVPGERIVFSGVGKTREEMRLALEGGIRQFNVESEPEMRALSEVAASMDLRA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCEN 169
            I +R+NP V           +  ++ G           +        V G+  H   + 
Sbjct: 145 PIAVRVNPDVDARTHEKIATGKKENKFGIPIARASEVYAEAAALPGLEVVGIDVHIGSQL 204

Query: 170 KSFLCFSAML---KNIEKEFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221
                F        ++         +I  + LGGG+               D+   +K  
Sbjct: 205 TDLEPFEQAYLKVADLTGRLRAEGHEIRRLDLGGGLGIPYTRSNEAPPLPTDYGALIKRT 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280
                 +I +EPG  I  N+  L + V+ +     ++ +I+D+++   V   +       
Sbjct: 265 VGHLGCEIEIEPGRLISGNSGVLVSRVIYVKNGEGRDFLILDAAMNDLVRPSMYGAHHDI 324

Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +               V G  C  GD F +     P+  GD ++F     Y     + +N
Sbjct: 325 VPVAEAAPGTEGQPYDVVGPICETGDTFAKARPLPPMSEGDLVAFRSAGAYGAVMASEYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367
              +    +   D         ++++     S
Sbjct: 385 SRPLVPEVLVRGDHFAVIRARPTFDEMLRRDS 416


>gi|283956889|ref|ZP_06374362.1| putative decarboxylase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283791615|gb|EFC30411.1| putative decarboxylase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 382

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 139/376 (36%), Positives = 212/376 (56%), Gaps = 18/376 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TP Y++++ KL  N +    + + +G K+LLALK FA  G    + +Y+ G T S L+
Sbjct: 6   IQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSGLW 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E     E    E H Y+ A+K+ EI  + S    I+FN+++Q +KF+  A+     +GLR
Sbjct: 66  EAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQ--AKTQKNSLGLR 123

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
            N   S +   L +P   +SRLG + KD    ++  + GL FH  CE +S     A+LK 
Sbjct: 124 CNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLNAIEGLHFHALCE-ESADALEAVLKV 182

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            E++FG +I Q++W++ GGG H T K Y V+      K FS+KY VQ+YLEPGEA+   T
Sbjct: 183 FEEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKYGVQVYLEPGEAVGWQT 242

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP---------------NTG 286
             L  +V+DI EN K + I+D+S EAH+PD ++   ++ +                    
Sbjct: 243 GNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKISDLKEN 302

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
            ++ ++ G +CLAGD+ GE+ F+K +KIGD+I F D   Y I +   FNGI +P + + N
Sbjct: 303 EFSYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIHYTIVKNTTFNGIRLPNLMLLN 362

Query: 347 VDGTIKAIREFSYNDY 362
               ++ IREFSY DY
Sbjct: 363 AKNELQMIREFSYKDY 378


>gi|153003227|ref|YP_001377552.1| diaminopimelate decarboxylase [Anaeromyxobacter sp. Fw109-5]
 gi|152026800|gb|ABS24568.1| diaminopimelate decarboxylase [Anaeromyxobacter sp. Fw109-5]
          Length = 422

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 65/387 (16%), Positives = 123/387 (31%), Gaps = 26/387 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+     L  +              +  A+K  A   +     +   G    S  E
Sbjct: 26  GTPLYVYSTATLTRHWKVLHRSLAGIRHVVCYAVKANANLALLARFAKLGSGFDIVSAGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++   K  +  A    S    +   +  +L +    A+++     
Sbjct: 86  LYRVLKAGGDPRKVVFSGVGKRDDEIAFALESGVRVLNVESAGELARISIVARRMGVRAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           I LR+NP V              ++ G    +              +V G+  H   +  
Sbjct: 146 IALRVNPDVDPKTHPYISTGLRENKFGVSVDEARRLYPLAAKDEALHVMGIASHIGSQIT 205

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
           +   F   +  +    +E       +  + +GGG+    KD        +   +++   +
Sbjct: 206 TVKPFLDAIDRVLSLARELEKQGIPLAHLDVGGGLGIRYKDEDPPHPDEYGAAIRKALAR 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283
           +  ++ LEPG  +V N   L T VL +  +  K  V+VD+++   V    +Y     I P
Sbjct: 266 WKGEVLLEPGRVLVGNAGVLVTRVLHVKRSGRKTFVVVDAAMNDLVRPA-IYDAHHDIEP 324

Query: 284 NTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
              P        A V G  C + D             GD ++      Y  +  + +N  
Sbjct: 325 VGPPREGEREVVADVVGPICESSDFLARKRRMPEPVPGDLLAVRSAGAYGFSMSSNYNAR 384

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
                 + + D  + A R  +Y D   
Sbjct: 385 PRAAEVLVDGDQALLARRRETYADLVR 411


>gi|118475146|ref|YP_891540.1| carboxynorspermidine decarboxylase [Campylobacter fetus subsp.
           fetus 82-40]
 gi|118414372|gb|ABK82792.1| carboxynorspermidine decarboxylase [Campylobacter fetus subsp.
           fetus 82-40]
          Length = 377

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 138/372 (37%), Positives = 203/372 (54%), Gaps = 9/372 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           IKTP Y+ ++  L NNL     I   +G K+L ALK FA  G  + +++Y++G T S L+
Sbjct: 6   IKTPAYVCEEAALENNLKILKNISDESGAKVLCALKGFAFSGAMELVSKYLNGATCSGLH 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E          E H Y+ A+ D +ID VLS    ++FN+ +Q NKF+ K+ K  K IGLR
Sbjct: 66  EAKYAKYHGFKEIHTYSPAFSDDDIDEVLSISHHVVFNSFAQWNKFRSKSIKSGKSIGLR 125

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP+ S S   + +P   FSRLG    +   S +  V GL FH  CE +S      +LK 
Sbjct: 126 VNPNTSASPTDMYNPCGEFSRLGITKDNFDFSNLDGVEGLHFHALCE-ESAKSLEFVLKA 184

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            E++F   I +++WI+ GGG H T   Y +      +K F EKY  QI++EPGEA+    
Sbjct: 185 FEEQFRTIIPKMKWINFGGGHHITKSGYDINLLINLIKSFKEKYGTQIFIEPGEAVGWRC 244

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY--PNTGPYTAMVCGRSCLA 299
             L ++VLDI  N +   I+D+S E H+PD +L     +I      G +     G +CLA
Sbjct: 245 GFLISSVLDIVTNGEKTCIIDASAECHMPDTILMPYRPSIRGENKNGKFAYRFGGATCLA 304

Query: 300 GDIFGE------FHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353
           GDI G       F F+  +K+GD++ FED   Y I +   FNG+ +P + + N +G +K 
Sbjct: 305 GDIVGAAAGEPIFKFDNEIKVGDKVIFEDQIHYTIVKNTTFNGVKLPNLVMMNKNGDVKI 364

Query: 354 IREFSYNDYYNN 365
           IR+F Y++Y   
Sbjct: 365 IRDFGYDEYSRR 376


>gi|325294479|ref|YP_004280993.1| diaminopimelate decarboxylase [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325064927|gb|ADY72934.1| diaminopimelate decarboxylase [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 420

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 66/386 (17%), Positives = 117/386 (30%), Gaps = 23/386 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L +          +       A+K  +   +   L +   G  + S+ E
Sbjct: 31  GTPLYVYSQSALEHWFKEFDSAFSSIEHITCFAVKSNSNISVLKVLKELGAGADTVSMGE 90

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--K 117
           +          +   +    K  +                + S+L      A+KL K   
Sbjct: 91  IFRALTAGIDPKKIVFAGVGKRIDEIEYGLEKGILMFNVESESELYAINRVAEKLGKVAP 150

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I  R+NP V+             S+ G   +  IE           N  G+ FH   +  
Sbjct: 151 IAFRVNPDVNPKTHPYISTGLKTSKFGIAYEGAIELYKKAKNLKNINPIGIHFHIGSQIT 210

Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F    + I++          +IE+   GGG+  +        P +     +    +
Sbjct: 211 DVSVFGEAARKIKEIVKELYSVGIEIEYFDAGGGLGISYNPNEPPVPARALADEIIPIIK 270

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIY 282
               ++ LEPG  +  N   L + V+   E  +    IVD+ +       L       + 
Sbjct: 271 DLGCKLILEPGRRLAGNAGILLSQVIYKKERHEKLFYIVDAGMNDLARPSLYKAYHHIVP 330

Query: 283 PNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            +        A V G  C  GDI  E     P+  GD I+      Y     + +N    
Sbjct: 331 ASKKEGNLKKADVVGPICETGDILAEDRELPPLNEGDIIAVLSAGAYGFTMASNYNSRPR 390

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365
           P   +          +  +  D  + 
Sbjct: 391 PAEVIAKEGRAEIIRQRETLGDLISK 416


>gi|224417821|ref|ZP_03655827.1| carboxynorspermidine decarboxylase NspC [Helicobacter canadensis
           MIT 98-5491]
 gi|253827161|ref|ZP_04870046.1| carboxynorspermidine decarboxylase NspC [Helicobacter canadensis
           MIT 98-5491]
 gi|313141362|ref|ZP_07803555.1| carboxynorspermidine decarboxylase [Helicobacter canadensis MIT
           98-5491]
 gi|253510567|gb|EES89226.1| carboxynorspermidine decarboxylase NspC [Helicobacter canadensis
           MIT 98-5491]
 gi|313130393|gb|EFR48010.1| carboxynorspermidine decarboxylase [Helicobacter canadensis MIT
           98-5491]
          Length = 403

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 139/392 (35%), Positives = 213/392 (54%), Gaps = 27/392 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I +P Y+++++K + NL+    I+K +G K+LLALK +A W  FD   +Y+ G T+S LY
Sbjct: 13  IPSPCYVLEEEKFIKNLEILDSIQKESGAKILLALKGYALWRSFDIAKKYLSGITASGLY 72

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK----- 116
           E  LG+E FGGE   ++ AYK  E+  ++   D IIFN+  Q   FK    + ++     
Sbjct: 73  EARLGYETFGGEITTFSPAYKYEEMQELVKISDHIIFNSFLQWQTFKPLIDEANQWRKNK 132

Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVNGLMFHNNCENKS 171
            ++GLR+NP  S     + +P    SRLG   K+  +   K     ++GL FH +CE  S
Sbjct: 133 IQVGLRVNPQYSEVTPAIYNPCVEGSRLGITPKEFKKGVKKYGLKGISGLHFHTHCEQNS 192

Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYL 231
                  LK   + FG +I Q++WI+ GGG H T KDY  +   + +K+F +++ VQ+YL
Sbjct: 193 DALKRT-LKYFIQHFGKYIPQMQWINFGGGHHITRKDYNRELLVKIIKKFKKRFDVQVYL 251

Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN------- 284
           EPGEA+      L  +V+DI  N  ++ I+D S  AH+PD L       +  +       
Sbjct: 252 EPGEAVGWQCGFLMGSVIDIVHNGVDIAILDVSATAHMPDCLEMPYRPMVRNSYLAKATS 311

Query: 285 ---------TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                       YT    G +CLAGDI G++ F++P+K+GDRI FED+  Y I + N FN
Sbjct: 312 KNGHLKLKGEQKYTYRFGGPTCLAGDIIGDYSFKEPLKLGDRIIFEDMVHYTIVKNNTFN 371

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367
           G+ +P+I + + +G  K  + +SY  Y    S
Sbjct: 372 GVPLPSIGMIDKEGRFKLFKSYSYESYKERNS 403


>gi|220903410|ref|YP_002478722.1| carboxynorspermidine decarboxylase [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
 gi|219867709|gb|ACL48044.1| carboxynorspermidine decarboxylase [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 406

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 127/395 (32%), Positives = 203/395 (51%), Gaps = 30/395 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQY-----MDGTT 56
           I +P +++D+ +L  N      +++  G K+LLALK +AAWG F  L+++     + G  
Sbjct: 13  IPSPCFVLDENQLSANAAVLNSVQERTGAKILLALKGYAAWGTFPLLSRFKGHGPLWGAC 72

Query: 57  SSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD------- 109
           +SS+ E  L  E+FGGE HA+   +   E+  +L+  D I+FN+ +Q  +F         
Sbjct: 73  ASSVDEARLAREEFGGEVHAFAAGWNRREMAELLTLTDHIVFNSTAQWREFAPAIAMWNK 132

Query: 110 -KAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE 168
            +      + GLRINP  S     + +P  P SRLG + K    + +  ++GL FH  CE
Sbjct: 133 GRCPDRQIQCGLRINPEHSEGAVEIYNPCAPGSRLGIRRKHFDPTAMTGISGLHFHTLCE 192

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
                     L  +E  FG ++ Q  WI++GGG H T   Y +   C+ L ++ ++Y  Q
Sbjct: 193 QG-ADALERTLAAVESHFGQWLPQCRWINMGGGHHITKPGYDLDLLCRLLTQWRDRYQAQ 251

Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN---- 284
           IYLEPGEA+  +   L  TVLD+ E    + I+D  +  H+PD +       +       
Sbjct: 252 IYLEPGEAVALDAGWLVATVLDVIEADMPIAILDIGIPCHMPDVIEMPYRPRVRYEHDGA 311

Query: 285 --------TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                      +T  + G+SCLAGD+ GE+ F+ P+K G R+ FED+A Y++ +   FNG
Sbjct: 312 AVLAGEAGQKAWTCRLAGKSCLAGDVAGEYSFDAPLKPGQRLVFEDMAIYSMVKTTTFNG 371

Query: 337 INMPTIAVKNVDGT----IKAIREFSYNDYYNNLS 367
           + +P+I +   D       + +REF Y ++ N LS
Sbjct: 372 LRLPSIGICGPDAAGDMYFRMLREFGYANFKNRLS 406


>gi|222054228|ref|YP_002536590.1| diaminopimelate decarboxylase [Geobacter sp. FRC-32]
 gi|221563517|gb|ACM19489.1| diaminopimelate decarboxylase [Geobacter sp. FRC-32]
          Length = 417

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 57/383 (14%), Positives = 113/383 (29%), Gaps = 22/383 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I +P+Y+  +  L  +              +  ++K  +   +         G    S  
Sbjct: 25  IGSPFYVYSQATLERHFRAMDEAFATVSHTICYSMKANSNLAVVKNFVNLGGGVDIVSGG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118
           E+              Y+   K  +      N         +  +L +  + A ++ +K 
Sbjct: 85  ELYRALKAGASPSKVVYSGVGKKDDEIEYALNTGILMFNVESEQELTRISEIANRMGRKA 144

Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
           G+  R+NP V              ++ G      IE   +        + G+  H   + 
Sbjct: 145 GIAIRVNPDVDPQTHPYITTGLKNAKFGITIDRAIEEYRRAKGLPGIEILGIDCHIGSQL 204

Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSE 223
                F   +K ++   G        + +  LGGG+     D            + + ++
Sbjct: 205 TKVSPFVDAIKKLKNVIGKLKEMGISLTYFDLGGGLGIQYNDEAPPLPADYGSEIIKETK 264

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQES---A 279
              + +  EPG  +V N   L    L I    +   I +D+ +       L         
Sbjct: 265 DLGMHLIFEPGRNLVGNAGILVAKTLYIKHRDEKNFIVIDAGMNDLARPALYGSFHGIKP 324

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            +    G  TA + G  C +GD   +       K GD ++F     Y     + +N    
Sbjct: 325 VVKNQDGTITADIVGPICESGDFLAKDREVPMFKQGDLMAFMSAGAYGFAMSSSYNSRPR 384

Query: 340 PTIAVKNVDGTIKAIREFSYNDY 362
               +   +         +  D 
Sbjct: 385 VAEVMVKGNKFEVIRERETVEDL 407


>gi|238917346|ref|YP_002930863.1| hypothetical protein EUBELI_01423 [Eubacterium eligens ATCC 27750]
 gi|238872706|gb|ACR72416.1| Hypothetical protein EUBELI_01423 [Eubacterium eligens ATCC 27750]
          Length = 409

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 134/405 (33%), Positives = 211/405 (52%), Gaps = 41/405 (10%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTP Y+ID++ L++NL+    + ++ G  +LLA K F+A+  +  + +Y+ GTT+S +Y
Sbjct: 6   LKTPAYVIDEKMLIHNLEILHKVEEDTGCHILLAQKAFSAYAEYPLIGKYISGTTASGIY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LG E  G E H +  A+ D ++D +++ CD ++FN+VSQL K K +  +     GLR
Sbjct: 66  EARLGAECMGKENHVFAPAFTDEDMDELVNICDHVVFNSVSQLKKHKARCIEAGVSFGLR 125

Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCENKSFLC 174
           +NP  S      + DP  P SRLG   K+   +  +       + G+ FH  CE  S   
Sbjct: 126 VNPEFSTQGDHAIYDPCAPGSRLGVTLKNLKAALEEEPDVLSGMEGIHFHTLCEQNSDD- 184

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
             A LK +E++FG  +  ++W++ GGG H T +DY ++   + +    +KY VQ+Y+EPG
Sbjct: 185 LEATLKAVEEKFGFLMKDMKWVNFGGGHHITREDYDIETLEKCISHVKKKYDVQVYVEPG 244

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA--------------- 279
           EA+  N   L TTVLD  EN    +I+D+S   H+PD L    +                
Sbjct: 245 EAVALNAGYLVTTVLDKVENGITTLILDASAACHMPDVLEMPYTPPLRGGLKISDMEDEY 304

Query: 280 ------------------TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321
                                   G Y   +   +CLAGDI G++ F + + +GDR+ FE
Sbjct: 305 GIDKDIEIDFDMDVKEGIWKPAKNGRYRYRLSSYTCLAGDIIGDYQFGREINVGDRLVFE 364

Query: 322 DVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366
           D+A Y++ + N FNGI +P I + + DG  K  + F Y D+   L
Sbjct: 365 DMAIYSMVKNNTFNGIQLPDIVIMDSDGECKVWKHFGYEDFKGRL 409


>gi|86160486|ref|YP_467271.1| diaminopimelate decarboxylase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85776997|gb|ABC83834.1| diaminopimelate decarboxylase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 427

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 69/387 (17%), Positives = 127/387 (32%), Gaps = 26/387 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+     L  +              +  A+K  +   +     +   G    S  E
Sbjct: 26  GTPLYVYSTATLTRHWKVLHRSLAGLDHLVCYAVKANSNLAVLSLFARLGSGFDIVSGGE 85

Query: 63  VMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKL--HKK 117
           +    +     G+     V  +D EI   L +    +   +  +L +    A+++     
Sbjct: 86  LYRVLKAGGHPGKVVFSGVGKRDDEIAFALESGVKVLNVESAPELARVSIVARRMGVRAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G    +         +     + G+  H   +  
Sbjct: 146 IALRVNPDVDPKTHPYISTGLSENKFGVSVDEARRLYALAAQDPALELRGVACHIGSQIT 205

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
           +   F   +  +    K+ G    ++  + +GGG+  T  D        + + +K+   +
Sbjct: 206 TVRPFLDAIARVLALVKDLGKQGIRLGHVDVGGGLGITYADEEPPHPDEYGRAIKKALSR 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283
           +  ++ LEPG  +V N   L T VL + E+  K  V+VD+++   V     Y     I P
Sbjct: 266 FDGEVMLEPGRVLVGNAGVLVTRVLHVKESGRKVFVVVDAAMNDLVRPS-YYDAHHEIEP 324

Query: 284 NTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
              P          V G  C + D             GD +       Y     + +N  
Sbjct: 325 AGAPRKDAEEIVCDVVGPICESSDFLARKRRMPRPVRGDLLVVRSAGAYGFAMSSNYNSR 384

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
                 + + DG   A R  +Y D   
Sbjct: 385 PRAAEVLVDGDGARLARRRETYADLVR 411


>gi|120602484|ref|YP_966884.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris DP4]
 gi|120562713|gb|ABM28457.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris DP4]
          Length = 412

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 66/382 (17%), Positives = 116/382 (30%), Gaps = 22/382 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+     L  +          A      ++K  +   +   L     G    S  E
Sbjct: 26  GTPLYVYSAGTLERHYRAFDSAFGKAAHLTCFSVKACSNIHILKLLGSLGAGVDIVSGGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
           +         G    Y+   K  +        D       ++ +L   ++ A  +     
Sbjct: 86  LHRALLAGIPGRRIVYSGVGKRPDEIRSALEADILMFNVESLQELRTIEEVAASMGTTAR 145

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-----KNVN--GLMFHNNCENK 170
             LRINP V              ++ G +    +E  +      +++  G+  H   +  
Sbjct: 146 VSLRINPDVDPHTHPYISTGLQKNKFGIEMTQALEGYMLARDLPHIDPIGIDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--- 224
           S   F   L       +        I ++ LGGG+  T  +          +   E+   
Sbjct: 206 SLSPFLEALDKVLEFREHLSILGLDISYLDLGGGLGITYGEETPPHPRDFGRAVLERTKG 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQES---AT 280
            ++ + LEPG  I  N   L T VL       K  VIVD+++   V   L          
Sbjct: 266 LNLTLVLEPGRVIAGNAGILVTEVLYTKTTPSKQFVIVDAAMNDLVRPSLYASYHRIAEV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
           +          V G  C +GD          V+ G+ ++      Y  +  + +N     
Sbjct: 326 LPHGRTEQAVDVVGPICESGDFLARDRVLPAVEQGELLAVFSAGAYGFSMSSQYNSRPRA 385

Query: 341 TIAVKNVDGTIKAIREFSYNDY 362
              +   D      R  +Y+D 
Sbjct: 386 AEVLVRGDTAKSIRRRETYDDL 407


>gi|86151988|ref|ZP_01070201.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|315124941|ref|YP_004066945.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
 gi|85841096|gb|EAQ58345.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|315018663|gb|ADT66756.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
          Length = 382

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 138/376 (36%), Positives = 212/376 (56%), Gaps = 18/376 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TP Y++++ KL  N +    + + +G K+LLALK FA  G    + +Y+ G T S L+
Sbjct: 6   IQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSGLW 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E     E    E H Y+ A+K+ EI  + S    I+FN+++Q +KF+  A+     +GLR
Sbjct: 66  EAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQ--AKTQKNSLGLR 123

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
            N   S +   L +P   +SRLG + KD    ++  + GL FH  CE +S     A+LK 
Sbjct: 124 CNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLSTIEGLHFHALCE-ESADALEAVLKA 182

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            E++FG +I Q++W++ GGG H T K Y V+      K FS+KY VQ+YLEPGEA+   T
Sbjct: 183 FEEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKYGVQVYLEPGEAVGWQT 242

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP---------------NTG 286
             L  +V+DI EN K + I+D+S EAH+PD ++   ++ +                    
Sbjct: 243 GNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKISDLKEN 302

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
            ++ ++ G +CLAGD+ GE+ F+K +KIGD+I F D   Y I +   FNG+ +P + + N
Sbjct: 303 EFSYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIHYTIVKNTTFNGVRLPNLMLLN 362

Query: 347 VDGTIKAIREFSYNDY 362
               ++ IREFSY DY
Sbjct: 363 AKNELQMIREFSYKDY 378


>gi|160889900|ref|ZP_02070903.1| hypothetical protein BACUNI_02331 [Bacteroides uniformis ATCC 8492]
 gi|156860892|gb|EDO54323.1| hypothetical protein BACUNI_02331 [Bacteroides uniformis ATCC 8492]
          Length = 366

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 122/367 (33%), Positives = 191/367 (52%), Gaps = 9/367 (2%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE 68
           +++  L  NL     +   AGV+++LA K FA W  F    +Y+D +T+SS+YE  L  E
Sbjct: 1   MEEGLLRKNLALIKSVADRAGVEIILAFKSFAMWRSFPIFREYIDHSTASSVYEARLALE 60

Query: 69  KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGLRINPSV 126
           +FG + H Y+ AY + +   ++     I FN++SQ ++F     A+      G+RINP  
Sbjct: 61  EFGSKAHTYSPAYTEADFPEIMRCSSHITFNSLSQFHRFYPVVVAEGSGISCGIRINPEY 120

Query: 127 SYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF 186
           S  +  L +P  P +R G       E     + G   H +CE+ S+      L+++E +F
Sbjct: 121 SEVETELYNPCAPGTRFGVMADPLPEELPVGIEGFHCHCHCESSSYE-LEHTLEHLEGKF 179

Query: 187 GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNTTTLN 245
             + +QI+W++LGGG   T KDY V+   + L+    +YS  QI LEPG A    T  L+
Sbjct: 180 SRWFSQIKWLNLGGGHLMTRKDYDVEHLVRLLQGLKGRYSHLQIILEPGSAFTWQTGVLS 239

Query: 246 TTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT----GPYTAMVCGRSCLAG 300
           + ++DI EN      + + S   H+PD L       +        GPY   + G SCL+G
Sbjct: 240 SEIVDIVENRGIRTAILNVSFTCHMPDCLEMPYQPAVRGAEMGDAGPYVYRLGGNSCLSG 299

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           D  G + F+  ++IG+RI FED+  Y   + N FNGI+ P IA+   +G  +  ++FSY 
Sbjct: 300 DYMGLWSFDHELQIGERIVFEDMIHYTTVKTNMFNGIHHPAIAMWTKEGKAEVFKQFSYE 359

Query: 361 DYYNNLS 367
           DY   +S
Sbjct: 360 DYRGRMS 366


>gi|84515838|ref|ZP_01003199.1| diaminopimelate decarboxylase [Loktanella vestfoldensis SKA53]
 gi|84510280|gb|EAQ06736.1| diaminopimelate decarboxylase [Loktanella vestfoldensis SKA53]
          Length = 422

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 66/391 (16%), Positives = 123/391 (31%), Gaps = 26/391 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP+Y+     L  +          A   +  A+K  +   +   L Q   G    S  E
Sbjct: 26  GTPFYVYSTATLTRHFQLFDEALGFADHLVCFAMKSLSNIAVLRVLAQAGAGMDVVSGGE 85

Query: 63  VMLGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
            +        G+   ++   K  D    A+          +  ++      A+ L K   
Sbjct: 86  YLRAKAAGVPGDRIVFSGVGKTADEMRMALQGGIRQFNVESEPEMVALDAVARSLGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LRINP V           +  ++ G       E            V G+  H   +  
Sbjct: 146 ITLRINPDVDAKTHAKIATGKSENKFGIPISRAREVYALAATLKGLKVVGIDVHIGSQLT 205

Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEFS 222
               F A    + +          QI  + LGGG+    +          D+   ++   
Sbjct: 206 ELAPFEAAYAKVAELTEVLRADGHQITRLDLGGGLGIPYERSNAAPPLPSDYGAMIERTL 265

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATI 281
                +I +EPG  I  N   + + V+ +     ++ +I+D ++   +   +       I
Sbjct: 266 GHLGCEIEIEPGRLISGNAGLMVSQVIYVKSGEDRDFLILDGAMNDLIRPAMYDAWHDII 325

Query: 282 YPNT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                     P    + G  C +GD F +     P++ GD ++F     Y     + +N 
Sbjct: 326 PVVEPAPGTEPARYDIVGPVCESGDTFAKAREVAPMQPGDLVAFRSAGAYGAVMASEYNS 385

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367
             +    + + D      +  SY +     S
Sbjct: 386 RPLIPEVLVHGDQFAVIRKRPSYEEMIARDS 416


>gi|91776793|ref|YP_546549.1| diaminopimelate decarboxylase [Methylobacillus flagellatus KT]
 gi|91710780|gb|ABE50708.1| diaminopimelate decarboxylase [Methylobacillus flagellatus KT]
          Length = 445

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 63/386 (16%), Positives = 118/386 (30%), Gaps = 25/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L +               +  A+K   +  + +   +   G    S  E
Sbjct: 55  GTPTYVYSRAALESAYTRFAAGFDGQDHLVCFAVKSNPSLAVLNLFARLGAGFDIVSGGE 114

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKL--HKK 117
           +              ++   K         N     FN  + S+L++  D A +L     
Sbjct: 115 LARVLAAGGDPAKVVFSGVGKTETEMETALNAGIFCFNVESASELDRLNDVAGRLGKTAP 174

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LR+NP+V              ++ G   +D               V+G+  H   +  
Sbjct: 175 VSLRVNPNVDAKTHPYISTGLKNNKFGVAYEDAFNLYQHAASLPNIAVHGVDCHIGSQLT 234

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
               F      +     +      ++  I LGGGI     D        +   + +    
Sbjct: 235 ELSPFMDAFDRVLALVDQLEAEGIRVAHIDLGGGIGICYADETPPDFAAYAAAMLQKLGD 294

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESATIYP 283
             V++  EPG A+V N   L T V  +     KN  IVD+++   +   L          
Sbjct: 295 RKVKLVFEPGRALVGNAGALITKVEYLKHTEAKNFAIVDAAMNDLMRPALYDAYHEIAAV 354

Query: 284 NTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
                        + G  C +GD  G       ++ GD ++      Y ++  + +N   
Sbjct: 355 VPATDPSSAQVYEIVGPVCESGDFLGHDRKLA-LQQGDLLAVLSAGAYGMSMSSNYNTRP 413

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364
                + + D T       +    + 
Sbjct: 414 RAAEVMVDGDKTHLIRERETVAQLFA 439


>gi|121612689|ref|YP_001001162.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|167006055|ref|ZP_02271813.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|87249963|gb|EAQ72922.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp.
           jejuni 81-176]
          Length = 382

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 141/376 (37%), Positives = 214/376 (56%), Gaps = 18/376 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TP Y++++ KL  N +    + + +G K+LLALK FA  G    + +Y+ G T S L+
Sbjct: 6   IQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSGLW 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E     E    E H Y+ A+K+ EID + S    I+FN+++Q +KF+  A+     +GLR
Sbjct: 66  EAKFAKEYMDKEIHTYSPAFKEDEIDEIASLSHHIVFNSLAQFHKFQ--AKTQKNSLGLR 123

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
            N   S +   L +P   +SRLG + KD    ++  + GL FH  CE +S     A+LK 
Sbjct: 124 CNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLSTIEGLHFHALCE-ESADALEAVLKV 182

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            E++FG +I Q++W++ GGG H T K Y V+      K FS+KYSVQ+YLEPGEA+   T
Sbjct: 183 FEEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKYSVQVYLEPGEAVGWQT 242

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP---------------NTG 286
             L  +V+DI EN K + I+D+S EAH+PD ++   ++ +                    
Sbjct: 243 GNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKISDLKES 302

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
            ++ ++ G +CLAGD+ GE+ F+K +KIGD+I F D   Y I +   FNGI +P + + N
Sbjct: 303 EFSYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIHYTIVKNTTFNGIRLPNLMLLN 362

Query: 347 VDGTIKAIREFSYNDY 362
               ++ IREFSY DY
Sbjct: 363 AKNELQMIREFSYKDY 378


>gi|260772924|ref|ZP_05881840.1| carboxynorspermidine decarboxylase putative [Vibrio metschnikovii
           CIP 69.14]
 gi|260612063|gb|EEX37266.1| carboxynorspermidine decarboxylase putative [Vibrio metschnikovii
           CIP 69.14]
          Length = 376

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 166/368 (45%), Positives = 239/368 (64%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TPY++ID+ KL+ NL+ A  +++ +GVKL+LALKCF+ WG+FD +  Y+DGTTSS  +
Sbjct: 6   LNTPYFMIDEAKLIANLEIAKRLKERSGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG+EKFGGETHAY+V Y + ++  V   CD +IFN+ SQL  ++   +     +GLR
Sbjct: 66  EVKLGYEKFGGETHAYSVGYSEQDVKEVADICDKMIFNSQSQLAAYRHLVEGKA-SLGLR 124

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP VSY+   LA+P R +SRLG +      S   ++NG+MFH NCENK    F A+L  
Sbjct: 125 LNPGVSYAGQDLANPARKYSRLGVQFDKLDTSVFDSINGVMFHMNCENKDVDAFIALLDA 184

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I  +FG ++ +++W+SLGGG+ FT   Y V      LK F++K+ VQ+YLEPGEAI+T T
Sbjct: 185 ISDKFGAYLDKLDWVSLGGGVFFTWPGYDVDKLADALKAFADKHQVQLYLEPGEAIITQT 244

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY--PNTGPYTAMVCGRSCLA 299
           T L  TV+DI +N     IVDS+ EAH  D L+Y+E A++      G +  ++   SCLA
Sbjct: 245 TDLVVTVVDIVDNEMQTAIVDSATEAHRLDTLIYREPASVLEANQQGEHEYVIGSCSCLA 304

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F    F +P++IG ++   D AGY + + NWFNG+ MP++  +  DG I  + EF Y
Sbjct: 305 GDQFCVAKFAEPLQIGQKLHIMDSAGYTMVKLNWFNGLKMPSVYCERRDGQIIKLNEFGY 364

Query: 360 NDYYNNLS 367
            D+  +LS
Sbjct: 365 QDFKRSLS 372


>gi|89052972|ref|YP_508423.1| diaminopimelate decarboxylase [Jannaschia sp. CCS1]
 gi|88862521|gb|ABD53398.1| diaminopimelate decarboxylase [Jannaschia sp. CCS1]
          Length = 421

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 59/390 (15%), Positives = 119/390 (30%), Gaps = 26/390 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+     L  +              +  A+K  +   +   +     G    S  
Sbjct: 25  VGTPFYVYSTATLTRHFQLFEEALGGMDHLICFAVKSNSNQAVLSHMAMLGAGMDVVSGG 84

Query: 62  EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E +        G+   ++     +D    A+          +  ++++    A  L   +
Sbjct: 85  EYLRAKAAGVPGDKIVFSGIGKTEDEMRLALNGGIRQFNVESEPEMHRLSRVATALGVTV 144

Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCEN 169
            +  R+NP V           R   + G       E            V G+  H   + 
Sbjct: 145 PITVRVNPDVDAKTHAKIATGRKEDKFGIPIARAREVYALAASLPGLQVIGIDVHIGSQL 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221
                F      + +   +       I  + LGGG+    +          ++ + +K  
Sbjct: 205 TDLEPFEIAYAKVAELTEQLREDGHTITRLDLGGGLGIPYERSNSAPPLPIEYGEVIKRT 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                 +I +EPG  I  N   L  + + +     ++ +I+D+++   +   +       
Sbjct: 265 VGHLGCEIEIEPGRLISGNAGLLVASTIYVKHGEDRDFLILDAAMNDLIRPAMYGAYHDI 324

Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           I               + G  C +GD F +     PVK  D I+F     Y     + +N
Sbjct: 325 IPVVEPAPGAEQSPYDIVGPVCESGDTFAKQRDLPPVKEADLIAFRSAGAYGAVMSSEYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              +    + N D         S++D  N 
Sbjct: 385 TRPLIPEVLVNGDQFAVIRARPSFDDMINR 414


>gi|288559410|ref|YP_003422896.1| diaminopimelate decarboxylase LysA [Methanobrevibacter ruminantium
           M1]
 gi|288542120|gb|ADC46004.1| diaminopimelate decarboxylase LysA [Methanobrevibacter ruminantium
           M1]
          Length = 427

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 69/394 (17%), Positives = 135/394 (34%), Gaps = 29/394 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ID++++ +N +             K+  A K      +   L +      + S 
Sbjct: 28  GTPIYVIDEERVRDNYNRFYNAFTKFYPKFKVFYACKANTNIAVLKILEEEGCCIDAVSP 87

Query: 61  YEVMLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            EV +  +  F G+   +     ++ E+D V S    +  ++VS L +  +      KKI
Sbjct: 88  GEVYICKKMGFSGDRILFTGNNIRNDEMDYVNSEDVILNIDSVSALKRLAESIDPQGKKI 147

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGE------KCKDKIESEIKNVNGLMFHNNCENKSF 172
             R+NP V              S+ G       +     +       G+  H        
Sbjct: 148 SFRVNPMVGAGHHGHCITGGEMSKFGIMETEAVEIYKLAKELGFEPVGMHSHIGSGILDP 207

Query: 173 LCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPV--------KDFCQRLKE 220
             F   +++     G          E+I  GGG+                 ++  +  KE
Sbjct: 208 EPFKLAIESTMNIAGKVHQEAGIDFEFIDFGGGVGIPYTPEEELLDLEHFAEENIKLFKE 267

Query: 221 FSEKYSV---QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
             E++ +    +YLEPG  IV + + +   V  + E+ +  + VD+     +   +    
Sbjct: 268 KLEEFDMGEPILYLEPGRYIVGDASVILVEVNSVKESYRKFIGVDAGFNTLLRPAMYDSY 327

Query: 278 SATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
              +  N        T  V G  C +GD+F        ++ GD +   +   Y     + 
Sbjct: 328 HHIVVANKMNEEPTQTVDVAGNVCESGDLFARDRPLPDIEEGDILGILNAGAYGYTMASN 387

Query: 334 FNGINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367
           +N   +P   +     +       +++D +   S
Sbjct: 388 YNSRPLPAEILVKNGESFVIREAQTFDDIFEKQS 421


>gi|254487951|ref|ZP_05101156.1| diaminopimelate decarboxylase [Roseobacter sp. GAI101]
 gi|214044820|gb|EEB85458.1| diaminopimelate decarboxylase [Roseobacter sp. GAI101]
          Length = 421

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 56/390 (14%), Positives = 117/390 (30%), Gaps = 26/390 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+     LL +        +     +  A+K  +   +  TL Q   G    S  
Sbjct: 25  VGTPFYVYSTATLLRHFKAFDDALEGMDHLVCYAMKANSNQAVLRTLAQAGAGMDVVSAG 84

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116
           E +        G+   ++   K       A+          +  ++      A+ L K  
Sbjct: 85  EYLRAKAAGVPGDKIVFSGVGKTAAEIRLALEGGIRQFNVESEPEMEVLDTVARSLGKVA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
            I +R+NP V           +  ++ G       E            V G+  H   + 
Sbjct: 145 PITIRVNPDVDAKTHAKIATGKSENKFGIPIARAREVYRMAGAMAGLEVIGIDVHIGSQL 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221
                F      + +           I  + LGGG+    +         +D+   ++  
Sbjct: 205 TDLAPFEQAYDKVAELTEVLRADGHNIRRLDLGGGLGIPYERSNEAPPLPRDYGAMVQRK 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280
                 ++ +EPG  I  N   + + V+ +        ++ D ++   +   +       
Sbjct: 265 LGHLGCEVEIEPGRLIAGNAGLMISEVIYVKSGEGRDFLILDGAMNDLIRPAMYEAHHDI 324

Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           I               + G  C +GD F +      +  GD ++F     Y     + +N
Sbjct: 325 IPVVEPAPGAEQQPYDIVGPVCESGDTFAKQRMMPALAAGDLVAFRSAGAYGAVMSSEYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              +    +   D         ++++  N 
Sbjct: 385 SRALIPEVLVKDDQFAVIRPRPTFDEMINR 414


>gi|197124574|ref|YP_002136525.1| diaminopimelate decarboxylase [Anaeromyxobacter sp. K]
 gi|196174423|gb|ACG75396.1| diaminopimelate decarboxylase [Anaeromyxobacter sp. K]
          Length = 427

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 68/387 (17%), Positives = 126/387 (32%), Gaps = 26/387 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+     L  +              +  A+K  +   +     +   G    S  E
Sbjct: 26  GTPLYVYSTATLTRHWKVLHRSLAGLDHLVCYAVKANSNLAVLSLFARLGSGFDIVSGGE 85

Query: 63  VMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKL--HKK 117
           +    +     G+     V  +D EI   L +    +   +  +L +    A+++     
Sbjct: 86  LYRVLKAGGHPGKVVFSGVGKRDDEIAFALESGVKVLNVESAPELARVSIVARRMGLRAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    +         +     V G+  H   +  
Sbjct: 146 VALRVNPDVDPKTHPYISTGLSENKFGVSVDEARRLYALAAQDPALEVRGVACHIGSQIT 205

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
           +   F   +  +    K+ G    ++  + +GGG+  T  D        + + +K+   +
Sbjct: 206 TVRPFLDAIARVLSLVKDLGKQGIRLGHVDVGGGLGITYADEEPPHPDEYGRAIKKALSR 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283
           +  ++ LEPG  +V N   L T VL + E+  K  V+VD+++   V     Y     I  
Sbjct: 266 FDGEVMLEPGRVLVGNAGVLVTRVLHVKESGRKVFVVVDAAMNDLVRPS-YYDAHHEIEA 324

Query: 284 NTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
              P          V G  C + D             GD +       Y     + +N  
Sbjct: 325 AGAPRKDADEIVCDVVGPVCESSDFLARKRRMPRPVRGDLLVVRSAGAYGFAMSSNYNSR 384

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
                 + + DG   A R  +Y D   
Sbjct: 385 PRAAEVLVDGDGARLARRRETYADLVR 411


>gi|152990136|ref|YP_001355858.1| diaminopimelate decarboxylase [Nitratiruptor sp. SB155-2]
 gi|151421997|dbj|BAF69501.1| diaminopimelate decarboxylase [Nitratiruptor sp. SB155-2]
          Length = 400

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 67/384 (17%), Positives = 118/384 (30%), Gaps = 21/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D  ++  N +      K     +  A+K  +   +   L +   G    S+ E
Sbjct: 11  DTPLYVYDFNEVAKNYEAIKEAFKARKSIIAYAVKANSNMSLLKHLAELGSGADCVSIGE 70

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
           V              ++   K  +        D   I   + ++  + ++ A+KL K   
Sbjct: 71  VKRALLAGIPNYKIIFSGVGKRDDEIEEALLKDILYINIESEAETYRVEEIAKKLGKVAR 130

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170
              R+NP++              ++ G + +           S   N   + FH   +  
Sbjct: 131 VSFRVNPNIDPKTHPYISTGLHENKFGVEIETAKKLYLYAKNSPFINPVAIHFHIGSQLT 190

Query: 171 SFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                     ++ ++ +        I++  +GGG+    KD       D+ Q +      
Sbjct: 191 ELEPIKEASAIVADLVRSLQKLDIDIKFFDVGGGLGIRYKDEKTIEPYDYAQAILSTLRG 250

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I  EPG  IV N     T VL     + K  VIVD ++   +   L          
Sbjct: 251 TDMTIVCEPGRYIVGNAGVFLTKVLYEKQSDKKRFVIVDGAMNDLLRPSLYNAYHEVEVV 310

Query: 284 NTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                   A V G  C +GD   +     P K GD I  +    Y     + +N    P 
Sbjct: 311 GKSGNESLADVVGPVCESGDFLAKNRMLPPTKHGDVIVVKSAGAYGFVMASNYNTRPRPA 370

Query: 342 IAVKNVDGTIKAIREFSYNDYYNN 365
                           S+      
Sbjct: 371 EVAIENGEDRLIRERESFEYIIEK 394


>gi|91202264|emb|CAJ75324.1| similar to diaminopimelate decarboxylase lysa [Candidatus Kuenenia
           stuttgartiensis]
          Length = 429

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 60/399 (15%), Positives = 121/399 (30%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  K  +L   +      +     +  ++K  +   +   L     G    S  E
Sbjct: 26  GTPVYIYSKNAILTRFNELKTAFQEVDATICFSVKSNSNLSVCKILADEGSGFDVVSGGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKAQKL--HKK 117
           +              +    K  +        D       +++++      A +     K
Sbjct: 86  LFRALKAGGKPSKIVFAGVGKTDKEIQYALENDIFMFNVESIAEIEHINAAACRAGKTAK 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCENK 170
           + LRINP +           +  ++ G          +         + G+  H      
Sbjct: 146 VALRINPDIDAKTHAKTTTGKKENKFGIDLIVAETIIEKAKAYTNVTICGIHVHLGSPIY 205

Query: 171 SFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEK 224
           S   +   LK I             I+++++GGG   +     V +       +  F+++
Sbjct: 206 SADPYVNALKKITMFMEKCRNAGINIQYLNIGGGYCISYTGEKVIEPKDYSTQILPFAKE 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIK--NLVIVDSSVEAHVPDYLLYQESATI- 281
              ++ +EPG  I  N+  L T+V+   +N      VI D+++   +   L         
Sbjct: 266 MKCRVIMEPGRFITGNSGILVTSVIYNKQNSHGKKFVICDAAMNDLLRPALYDAFHRIWP 325

Query: 282 ----------------YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
                               G     + G  C + D+F +     PV  GD ++      
Sbjct: 326 VNTSVAMPDVETPDTSVAKQGMDLVDIVGPVCESSDVFAKDRAIPPVNEGDLLAIFSAGA 385

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y     + +N        + + D  I   +  +Y D   
Sbjct: 386 YGFTMSSSYNSRPRSCEILVDRDKYIVIRKRETYEDLIA 424


>gi|300022666|ref|YP_003755277.1| carboxynorspermidine decarboxylase [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299524487|gb|ADJ22956.1| carboxynorspermidine decarboxylase [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 381

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 124/372 (33%), Positives = 200/372 (53%), Gaps = 8/372 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y++D   L  NL  A  I++ AG K+LLA K FA    F  + + +DGTT+S  Y
Sbjct: 10  IATPSYVLDMAALKRNLARAAEIKREAGCKILLATKAFALPAAFPVMREVLDGTTASGEY 69

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK-FKDKAQKLHKKIGL 120
           E  LGHE+FG E H Y+ AY   E++ +      I FN+  Q+ K         +  +GL
Sbjct: 70  EARLGHEEFGKEVHVYSPAYAPGEVERLTKLAQHIYFNSPEQIEKNLATLKAHPNVSVGL 129

Query: 121 RINPSVSYSKF--ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
           RINP  S +     L DP  P+SR G   +       ++V  L  H+ CE+        +
Sbjct: 130 RINPGYSNATLGGALYDPCAPYSRFGATREMLDRVPWEHVGILHAHSLCESG-DAGSVGL 188

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
           ++++ + F  +I +++ ++ GGG       Y ++     +K F  +++V++ LEPG   V
Sbjct: 189 IEHVARAFPDYIRRVDAVNFGGGHFINKPGYDIQKLIAAIKAFRREFNVEVILEPGAGHV 248

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCG 294
            +   L  TVLD+  N K++ I+D+S   H+PD L    + +I     P   P++ ++ G
Sbjct: 249 VDAGYLVATVLDLHHNEKDIAILDASASTHMPDVLEVPYTPSIVGAGAPGEKPHSYILGG 308

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
           ++C+ GDI GE+ F++P+K GDR+ F D+  Y+  + N FNG+ +P +AV N D T   +
Sbjct: 309 KTCMTGDIIGEYSFDRPLKPGDRLVFTDMMQYSFVKNNTFNGVPLPDLAVLNEDNTCTVL 368

Query: 355 REFSYNDYYNNL 366
           R F Y+++   L
Sbjct: 369 RAFGYDEFRRRL 380


>gi|294788607|ref|ZP_06753849.1| diaminopimelate decarboxylase [Simonsiella muelleri ATCC 29453]
 gi|294483484|gb|EFG31169.1| diaminopimelate decarboxylase [Simonsiella muelleri ATCC 29453]
          Length = 406

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 63/386 (16%), Positives = 126/386 (32%), Gaps = 24/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L N           +   +  A+K  +   +    ++   G  + S  E
Sbjct: 18  GTPLYVYSENALTNAFRAYEMAFSGSQPLICYAVKANSNLSIIKHFSELGSGFDTVSGGE 77

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--K 117
           +          +   ++   K     A   N         ++ +L++    A+++ K   
Sbjct: 78  IARVLAAGGAAKKIIFSGVGKSVAEIAFALNAGIKCFNVESLPELDRINQVAEQMGKIAP 137

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LRINP V              ++ G       ++           + G+  H   +  
Sbjct: 138 ISLRINPDVDAKTHPYISTGLKANKFGIAMSQAEQAYQYAANQSHLKIMGIDCHIGSQLI 197

Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
                    + +     +      ++E I LGGG+     + P+ +   + Q ++     
Sbjct: 198 DLSPLVEACQRLLMLVDKLSAQGIELEHIDLGGGVGIVYHNEPIPNLNEYAQAVQNLLAG 257

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + + LEPG ++V N  TL T V  + +   KN VIVD+++   +   L          
Sbjct: 258 RKLDLVLEPGRSLVGNAGTLLTRVEFVKQGEEKNFVIVDAAMNDLMRPALYQAYHHIENA 317

Query: 284 NTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                    A + G  C  GD   +       + GD +       Y  +  + +N     
Sbjct: 318 EKNKQPEILADIVGPICETGDFLAQNRQIA-AEAGDLLLVHSAGAYGASMASNYNTRCRA 376

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNNL 366
              + + D   +  +  +  D    L
Sbjct: 377 AEVLVSGDKVREIRQRETLED-VMRL 401


>gi|294055999|ref|YP_003549657.1| carboxynorspermidine decarboxylase [Coraliomargarita akajimensis
           DSM 45221]
 gi|293615332|gb|ADE55487.1| carboxynorspermidine decarboxylase [Coraliomargarita akajimensis
           DSM 45221]
          Length = 404

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 130/380 (34%), Positives = 200/380 (52%), Gaps = 16/380 (4%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y++   +L  N +    + + +G K+LLALK FA    F  +++Y+ GTTSS L+E
Sbjct: 26  PSPAYIVQLDRLNENCELLEQVAETSGAKVLLALKGFACHSTFPVISKYLAGTTSSGLHE 85

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK-FKDKAQKLHKKIGLR 121
            +L  E FG E H Y+ AYK  E+ A+     +++FN+  QL    +        ++GLR
Sbjct: 86  ALLATEHFGKEVHVYSPAYKASELQALRHFAHSLVFNSADQLASGVRQLTDGPRPQLGLR 145

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNCENKSFLC 174
           +NP  S  +  L DP  P SRLG        +          +++GL FH  CE      
Sbjct: 146 VNPEYSEVETDLYDPCSPNSRLGTTRSALDSALQRLPSGLLHHLDGLHFHALCEQD-ADT 204

Query: 175 FSAMLKNIEKEFGHFI--TQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232
                +  E +FG  +    ++W++ GGG H T   Y +   C+ ++ F EKY V +YLE
Sbjct: 205 LEHTAEAFESKFGDLLETLPLKWLNFGGGHHITRPGYDLARLCKVVQYFREKYEVDVYLE 264

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNL-VIVDSSVEAHVPDYLLYQESATIYP----NTGP 287
           PGEA+  +T  L  TVLDI E      +I DSS   H+PD L       I      +  P
Sbjct: 265 PGEAVALHTGILVVTVLDILEAGGKQLIITDSSATCHMPDVLEMPYRPNILDAGEADEFP 324

Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
           YT  + G SCLAGD+ G++ F++PV+IG R+ F D++ Y + +   FNG+ +P I + + 
Sbjct: 325 YTYRIGGMSCLAGDVVGDYSFQQPVEIGQRLVFLDMSHYTMVKTTTFNGVPLPAICLHSE 384

Query: 348 DGTIKAIREFSYNDYYNNLS 367
              ++ +R+F Y+DY + LS
Sbjct: 385 ADGLQIVRKFHYSDYADRLS 404


>gi|254458657|ref|ZP_05072081.1| diaminopimelate decarboxylase [Campylobacterales bacterium GD 1]
 gi|207084423|gb|EDZ61711.1| diaminopimelate decarboxylase [Campylobacterales bacterium GD 1]
          Length = 402

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 59/384 (15%), Positives = 120/384 (31%), Gaps = 22/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP Y+ D   +           +     L  A+K  +   +         G    S+ E
Sbjct: 11  KTPLYVYDLDYMSKQYQELKEAFRGRKSILAYAVKANSNLSVVKHFANLGSGADCVSIGE 70

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--K 117
           V              ++   K  +        D   I   + ++L +    A++L+K  +
Sbjct: 71  VRRAFLAGIPAYKIIFSGVGKSDDEIREAIEKDILYINVESEAELFRVAIIAKELNKISR 130

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           I +R+NP++              ++ G          I        +  G+ FH   +  
Sbjct: 131 ISIRVNPNIDPQTHPYISTGLHDNKFGVDINTAKRMYIFSKNSDSLDPVGVHFHIGSQLT 190

Query: 171 SFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP---VKDFCQRLKEFSEK 224
           +         ++ ++ +       ++++  +GGG+  T  D       D+ Q +    + 
Sbjct: 191 NLEPIYESAVIVADLVRSLEAIDIELKFFDIGGGLGITYDDEATIKPYDYAQAILGTLKG 250

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES---AT 280
             + +  EPG  +  N     T VL       K  V+VD ++   +   L        A 
Sbjct: 251 LDLTVICEPGRFLTANAGYFLTKVLYEKQNGAKKFVVVDGAMNDLLRPALYGAYHRIEAI 310

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
               + P T  + G  C +GD F + +    +   D +       Y     + +N     
Sbjct: 311 TDSASEPRTVDIVGPVCESGDFFAKDYLLPELNHNDLLVVHSAGAYGFGMGSNYNTRGRS 370

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
                         +  ++ D   
Sbjct: 371 AEVAVEKGQARLIRKRENFEDLIA 394


>gi|71279638|ref|YP_267983.1| diaminopimelate decarboxylase [Colwellia psychrerythraea 34H]
 gi|71145378|gb|AAZ25851.1| diaminopimelate decarboxylase [Colwellia psychrerythraea 34H]
          Length = 420

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 64/385 (16%), Positives = 124/385 (32%), Gaps = 22/385 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TP+Y      +  +         +    +  A+K  +   +  TL +   G    S+ 
Sbjct: 28  VQTPFYCYSSTAIETSFQAYKNAFSSQDALICYAVKANSNQAVLATLAKLGSGADVVSMG 87

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKAQKLHKKI 118
           E+          +   Y+   K  E      +         +  +L      A  L+K  
Sbjct: 88  EIRRAITAGIPADKIVYSGVAKTEEEIHYALSLGIFQFNVESEPELELISKVATSLNKTA 147

Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            +  RINP V           +  ++ G        +  +        V G+  H   + 
Sbjct: 148 AIAFRINPDVCAQTHAKISTGKAENKFGVPISKARIAYKRAASLPGIKVQGVDVHIGSQL 207

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSE 223
            S   F    + I     E      +I  + +GGG+  T  D      + +   +K    
Sbjct: 208 TSLAPFEEAYQRIAELVNELRADGHEISVVDVGGGLGITYLDEIIPSKQSYADLVKAQLG 267

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIY 282
             + +I +EPG +++ N   L ++V+ I     +  +I+D+ +   +   +       I 
Sbjct: 268 HLNCKIIIEPGRSLLGNAGILVSSVVFIKNGEERQFLILDAGMNDLIRPSMYEAYHQIIA 327

Query: 283 PNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            N G     T  V G  C  GD F +         GD I+      Y     + +N   +
Sbjct: 328 VNKGANELKTYDVVGPVCETGDTFAKARQVHKSDAGDLIAIMSSGAYGSVMSSSYNTRML 387

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
               +   +      +  SY +   
Sbjct: 388 APEVMVKGNEFAIVKKRPSYEEIIK 412


>gi|317153254|ref|YP_004121302.1| diaminopimelate decarboxylase [Desulfovibrio aespoeensis Aspo-2]
 gi|316943505|gb|ADU62556.1| diaminopimelate decarboxylase [Desulfovibrio aespoeensis Aspo-2]
          Length = 412

 Score =  243 bits (620), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 67/385 (17%), Positives = 119/385 (30%), Gaps = 22/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+     L  +                 ++K  +   +   L     G    S  E
Sbjct: 26  GTPLYVYSAATLTRHFQAFDSAFDGLDHLTCYSVKANSNLSVLKLLAGLGAGMDIVSGGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--K 117
           +          +   Y+   K         +         +V++L K  + A +  K  K
Sbjct: 86  LYRALKAGVSPDKIVYSGVGKRPSEIREALDAGILMFNIESVAELLKINEVAGEAGKVAK 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCENK 170
           +  RINP V              ++ G   ++ +E+     +       G+  H   +  
Sbjct: 146 VSFRINPDVDPQTHPYISTGMKKNKFGLDIENSLEAYRMCADLANIEPIGMDCHIGSQLT 205

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ---RLKEFSEK 224
           S   F   L    +           I+++ LGGG+  T  +       +    LKE    
Sbjct: 206 SIAPFMEALDKLLDFYGRLKDMGIGIKYLDLGGGLGITYDEEEPPHPTEFGQALKEKLTG 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++ LEPG  I  N   L T V+       +N +IVD+++   V   L          
Sbjct: 266 VPLKVILEPGRVIAGNAGILVTEVVYTKSNPSRNFLIVDAAMNDLVRPSLYGSYHRIAEV 325

Query: 284 NTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                   T  V G  C +GD          V  G+ ++      Y     + +N     
Sbjct: 326 TPKERDSLTYDVVGPICESGDFLARERALPAVNQGELLAVFSAGAYGFTMSSNYNSRPRA 385

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + + D    A +  +Y D  + 
Sbjct: 386 CELLVDGDTVTVARKRETYEDLIDK 410


>gi|88596732|ref|ZP_01099969.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|218563114|ref|YP_002344893.1| putative decarboxylase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|88191573|gb|EAQ95545.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|112360820|emb|CAL35620.1| putative decarboxylase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|284926720|gb|ADC29072.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp.
           jejuni IA3902]
 gi|315927463|gb|EFV06801.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp.
           jejuni DFVF1099]
 gi|315930108|gb|EFV09235.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp.
           jejuni 305]
          Length = 382

 Score =  243 bits (620), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 139/376 (36%), Positives = 212/376 (56%), Gaps = 18/376 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TP Y++++ KL  N +    + + +G K+LLALK FA  G    + +Y+ G T S L+
Sbjct: 6   IQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSGLW 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E     E    E H Y+ A+K+ EI  + S    I+FN+++Q +KF+  A+     +GLR
Sbjct: 66  EAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQ--AKTQKNSLGLR 123

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
            N   S +   L +P   +SRLG + KD    ++  + GL FH  CE +S     A+LK 
Sbjct: 124 CNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLSTIEGLHFHALCE-ESAGALEAVLKV 182

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            E++FG +I Q++W++ GGG H T K Y V+      K FS+KY VQ+YLEPGEA+   T
Sbjct: 183 FEEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKYGVQVYLEPGEAVGWQT 242

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP---------------NTG 286
             L  +V+DI EN K + I+D+S EAH+PD ++   ++ +                    
Sbjct: 243 GNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKISDLKES 302

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
            ++ ++ G +CLAGD+ GE+ F+K +KIGD+I F D   Y I +   FNGI +P + + N
Sbjct: 303 EFSYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIHYTIVKNTTFNGIRLPNLMLLN 362

Query: 347 VDGTIKAIREFSYNDY 362
               ++ IREFSY DY
Sbjct: 363 AKNELQMIREFSYKDY 378


>gi|313202258|ref|YP_004040916.1| diaminopimelate decarboxylase [Methylovorus sp. MP688]
 gi|312441574|gb|ADQ85680.1| diaminopimelate decarboxylase [Methylovorus sp. MP688]
          Length = 415

 Score =  243 bits (619), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 59/383 (15%), Positives = 115/383 (30%), Gaps = 23/383 (6%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP Y+  +Q L                 +  A+K   + G+     +   G    S  E+
Sbjct: 27  TPCYVYSRQALETAYRDFQQGFAGVDHLVCFAVKANPSLGVLSVFAKLGAGFDIVSGGEL 86

Query: 64  MLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKI 118
                         ++   K  D    A+ +        + ++L +  + A        +
Sbjct: 87  ARVLAAGGDASKVVFSGVGKTADEMRAALTAGIFCFNVESAAELERLNEVAGSMGKIAPV 146

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENKS 171
            LR+NP+V              ++ G   +               +V+G+  H   +   
Sbjct: 147 SLRVNPNVDAKTHPYISTGLKNNKFGVAYEQSLALYQQAAAMPNIDVHGVDCHIGSQLTE 206

Query: 172 FLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEKY 225
              F      +     +       I  I  GGGI     +        +   + +     
Sbjct: 207 LSPFLDAFDRVLALVDQLEAAGIAIRHIDAGGGIGICYNEETPPDFAAYAAAMLKKLGDR 266

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQES---ATI 281
            V++  EPG A+V N   L T V  +     KN  IVD+++   +   L           
Sbjct: 267 KVKLVFEPGRALVGNAGALLTRVEYLKHTEAKNFAIVDAAMNDLMRPALYDAYHQIAEVS 326

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
              T      + G  C +GD  G       +K GD ++      Y ++  + +N      
Sbjct: 327 PDATPKEIYEIVGPVCESGDFLGHDREL-GLKQGDLLAILSAGAYGMSMSSNYNTRPRAA 385

Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364
             + +        +  +  + + 
Sbjct: 386 EVMVDGASYQLIRKRETIAELFA 408


>gi|90414778|ref|ZP_01222747.1| putative carboxynorspermidine decarboxylase [Photobacterium
           profundum 3TCK]
 gi|90324144|gb|EAS40726.1| putative carboxynorspermidine decarboxylase [Photobacterium
           profundum 3TCK]
          Length = 377

 Score =  243 bits (619), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 167/368 (45%), Positives = 240/368 (65%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPY++ID+ KL+ NL+ A  +++ +GVKL+LALKCF+ WG+FD +  Y+DGTTSS  Y
Sbjct: 6   LKTPYFMIDESKLVANLEKAKLLKELSGVKLVLALKCFSTWGVFDLIKPYLDGTTSSGPY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG+E FGGETHAY+V Y + ++  V   CD +IFN+ +QL  ++   +     +GLR
Sbjct: 66  EVKLGYETFGGETHAYSVGYSEDDVKEVAEICDKMIFNSQNQLAAYRHLVEGKAS-LGLR 124

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP VSY+   LA+P R +SRLG +      +   N++G+MFH NCENK    F  +L +
Sbjct: 125 LNPGVSYAGQDLANPARQYSRLGVQWDHIDAAVFDNLDGVMFHMNCENKDEDAFIGLLND 184

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I  +FG  + +++W+SLGGG+ FT   Y ++     LK FSEK+ VQ+YLEPGEAI+T T
Sbjct: 185 ISDKFGQHLDKLDWVSLGGGVFFTWPGYNIEKLAAALKTFSEKHGVQLYLEPGEAIITKT 244

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299
             L  TV+DI EN     IVDS+ EAH  D L+Y E A+I      G +  ++   SCLA
Sbjct: 245 ADLVVTVVDIVENEMKTAIVDSATEAHRLDTLIYDEPASIAEASEQGEHQYVIGSCSCLA 304

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F    F++P+K+G R+   D AGY + + NWFNG+ MP+I  +  +G I+ + EF Y
Sbjct: 305 GDQFCVTQFDQPLKVGQRLHITDSAGYTMVKLNWFNGLKMPSIYCERANGEIEKLNEFGY 364

Query: 360 NDYYNNLS 367
           +D+  +LS
Sbjct: 365 DDFKRSLS 372


>gi|298675499|ref|YP_003727249.1| diaminopimelate decarboxylase [Methanohalobium evestigatum Z-7303]
 gi|298288487|gb|ADI74453.1| diaminopimelate decarboxylase [Methanohalobium evestigatum Z-7303]
          Length = 426

 Score =  243 bits (619), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 64/391 (16%), Positives = 127/391 (32%), Gaps = 30/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+ ++Q++ +N              L  A K      +   L +   G    S  E
Sbjct: 30  GSPIYVTNEQRIRDNFRRYKKAF--PDADLFYAAKANGNLTILKILAEEGAGADVFSDGE 87

Query: 63  VMLGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKI 118
           +          +   +N     D E+   +     +  ++  +LN     A+       I
Sbjct: 88  LYTALLAGIPRDKILFNGNSKSDRELLMAVQTGVRVSVDSFDELNTLSSIAKNEGKVVDI 147

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCENKS 171
             R+NP VS             S+ G    + + +  + ++       G+  H   +   
Sbjct: 148 AFRVNPDVSPKTHPKISTGLKTSKFGIPHDEVVSAYKQALDKPGVNPVGIHCHIGSQILE 207

Query: 172 FLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDY----------PVKDFCQRL 218
              F   +  +     +      + E++ +G G+    +                     
Sbjct: 208 VEPFVETVNKMMDLVEQISRLGVEFEFVDIGSGLGIPYEKNIEVPTPNDLADSIVPIFNE 267

Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
           +  +E  + ++ LEPG  +V ++  L T+V  +    K  V +D+     +   +     
Sbjct: 268 RCKAEGINPKLVLEPGRYLVGDSAILLTSVNTMKNAAKKFVGIDAGFNTMIRPVMYDAYH 327

Query: 279 ATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
             +  N        T  + G  C  GDI         ++ GD I+F DV GY  +  + +
Sbjct: 328 HAVVANKADKNAEDTYTIVGPICETGDIMATDRELPEIEKGDVIAFLDVGGYGFSMSSQY 387

Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           NG       + N        +  +Y D   N
Sbjct: 388 NGRPRCAELLVNKGDVDIIRKAETYADLLAN 418


>gi|261401778|ref|ZP_05987903.1| diaminopimelate decarboxylase [Neisseria lactamica ATCC 23970]
 gi|269208091|gb|EEZ74546.1| diaminopimelate decarboxylase [Neisseria lactamica ATCC 23970]
          Length = 406

 Score =  243 bits (619), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 66/385 (17%), Positives = 127/385 (32%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L    +            +  A+K      +         G    S  E
Sbjct: 18  GTPLYVYSQSALTEAFEHYQTAFAALNPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77

Query: 63  VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G   +T    V   + EI+ A+ +        ++ ++++ +  A +L     
Sbjct: 78  LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAS 137

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D +E+           + G+  H   +  
Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIVGIDCHIGSQLT 197

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                    + I             +E + LGGG+    +D     +  + Q +++    
Sbjct: 198 DLSPLVEACERILILVDSLAAEGIVLEHLDLGGGVGIVYQDEKVPDLGAYAQAVQKLIGT 257

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++ LEPG ++V N  +L T V  +     KN V+VD+++   +   L          
Sbjct: 258 RRLKLILEPGRSLVGNAGSLLTRVEFVKHGEEKNFVMVDAAMNDLMRPALYNAYHHIEAV 317

Query: 284 NTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
            T      TA + G  C  GD  G+       + GD +       Y  +  + +N  N  
Sbjct: 318 ETKDIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNARNRA 376

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + +  G     R  +      N
Sbjct: 377 AEVLVDGGGYRLIRRRETLEQQMAN 401


>gi|157164320|ref|YP_001466459.1| diaminopimelate decarboxylase [Campylobacter concisus 13826]
 gi|112801631|gb|EAT98975.1| diaminopimelate decarboxylase [Campylobacter concisus 13826]
          Length = 407

 Score =  243 bits (619), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 66/383 (17%), Positives = 116/383 (30%), Gaps = 21/383 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP Y+ D   +    +            +  A+K  +   +   L     G    S+ E
Sbjct: 11  KTPLYVYDFNYIKERYEALKNAFYARKSLVCYAVKANSNLSVLKFLADLGAGFDCVSIGE 70

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           V              ++      +   +A+ +    I   + ++L + ++ A+ L+ K  
Sbjct: 71  VKRALLAGAKRYQIIFSGVGKSDEELKEALENEILLINVESFAELLRLEEIAKGLNLKAR 130

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENK 170
           +  R+NP V              ++ G               SE     G+ FH   +  
Sbjct: 131 ISIRVNPGVDAKTHPYISTGLNENKFGVDAVTAKKMYIHAKASEFLEPTGIHFHIGSQLT 190

Query: 171 SFLCFSAMLKNIEKEFGHFI---TQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
           S        K + +           I++  +GGG+     D     + D+ Q +    + 
Sbjct: 191 SLSPIIDAAKIVSELLRELRALEIDIKFFDVGGGLGIIYNDEKEINLYDYAQGILGALKG 250

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             V I  EPG  IV N      +VL       K  VI D ++   +   L          
Sbjct: 251 QDVTIVCEPGRFIVGNAGYFVASVLYEKFNGKKRFVITDGAMNDLIRPSLYGAHHKIFVD 310

Query: 284 NTGPY--TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                  T  V G  C +GD   +       + GD I  +    Y  +  + +N  N   
Sbjct: 311 GKDENLGTCDVVGPVCESGDFLAKDINLPECESGDVIVVKGAGAYGFSMSSNYNTRNRAA 370

Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364
                        R   + D   
Sbjct: 371 EVCVLDGKDRLIRRRECFEDVVA 393


>gi|15606446|ref|NP_213826.1| diaminopimelate decarboxylase [Aquifex aeolicus VF5]
 gi|6225241|sp|O67262|DCDA_AQUAE RecName: Full=Diaminopimelate decarboxylase; Short=DAP
           decarboxylase
 gi|146386677|pdb|2P3E|A Chain A, Crystal Structure Of Aq1208 From Aquifex Aeolicus
 gi|146386678|pdb|2P3E|B Chain B, Crystal Structure Of Aq1208 From Aquifex Aeolicus
 gi|2983642|gb|AAC07209.1| diaminopimelate decarboxylase [Aquifex aeolicus VF5]
          Length = 420

 Score =  243 bits (619), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 64/384 (16%), Positives = 122/384 (31%), Gaps = 26/384 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+     +    +            +  A+K      +   L +   G    S  E
Sbjct: 33  GTPLYVYSSNFIKERFEAYRKAF--PDALICYAVKANFNPHLVKLLGELGAGADIVSGGE 90

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
           + L        E   Y    K  +      + +       +  +L+   + A KL KK  
Sbjct: 91  LYLAKKAGIPPERIVYAGVGKTEKELTDAVDSEILMFNVESRQELDVLNEIAGKLGKKAR 150

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           +  R+NP V              S+ G   ++  +            + G+  H   +  
Sbjct: 151 IAIRVNPDVDPKTHPYIATGMQKSKFGVDIREAQKEYEYASKLENLEIVGIHCHIGSQIL 210

Query: 171 SFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYP----VKDFCQRLKEFSE 223
               +   ++ +   +         I+++ +GGG+    K        +D    LK+  E
Sbjct: 211 DISPYREAVEKVVSLYESLTQKGFDIKYLDIGGGLGIKYKPEDKEPAPQDLADLLKDLLE 270

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIY 282
               +I LEPG +I+ N   L T V  + +   K+ +IVD+ +   +   +       I 
Sbjct: 271 NVKAKIILEPGRSIMGNAGILITQVQFLKDKGSKHFIIVDAGMNDLIRPSIYNAYHHIIP 330

Query: 283 PNTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
             T       A + G  C  GD        + V+ G+ ++      Y     + +N    
Sbjct: 331 VETKERKKVVADIVGPICETGDFLALDREIEEVQRGEYLAVLSAGAYGFAMSSHYNMRPR 390

Query: 340 PTIAVKNVDGTIKAIREFSYNDYY 363
               +          +  +Y DY 
Sbjct: 391 AAEVLVENGSVKLIRKRENY-DYI 413


>gi|309378898|emb|CBX22485.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 406

 Score =  243 bits (619), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 68/385 (17%), Positives = 127/385 (32%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L    +            +  A+K      +         G    S  E
Sbjct: 18  GTPLYVYSQSALTKAFEHYQTAFAALNPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77

Query: 63  VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G   +T    V   + EI+ A+ +        ++ ++++ +  A +L     
Sbjct: 78  LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAS 137

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D +E+           + G+  H   +  
Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLT 197

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                    + I             +E + LGGG+    KD     +  + Q +++    
Sbjct: 198 DLSPLIEACERILILVDALAAEGIVLEHLDLGGGVGIVYKDESVPDLGAYAQAVQKLIGT 257

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++ LEPG ++V N   L T V  +     KN V+VD+++   +   L          
Sbjct: 258 RRLKLILEPGRSLVGNAGALLTRVEFVKHGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317

Query: 284 NTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
            T    P TA + G  C  GD  G+       + GD +       Y  +  + +N  N  
Sbjct: 318 ETKNISPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNARNRA 376

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + +  G     R  +      N
Sbjct: 377 AEVLVDGGGYRLIRRRETLEQQMAN 401


>gi|294678687|ref|YP_003579302.1| diaminopimelate decarboxylase [Rhodobacter capsulatus SB 1003]
 gi|294477507|gb|ADE86895.1| diaminopimelate decarboxylase [Rhodobacter capsulatus SB 1003]
          Length = 422

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 64/393 (16%), Positives = 121/393 (30%), Gaps = 27/393 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+     L  +              +  A+K  +   +   L     G    S  
Sbjct: 25  VGTPFYVYSAATLTRHFQLFDAALAGTDHLVCFAIKSNSNLAVLKLLGDLGAGMDVVSGG 84

Query: 62  EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E          G+   ++     +D    A+          +  +L    + A  L    
Sbjct: 85  EYRRAKAAGVPGDRIVFSGVGKTRDEIRLALTGGIRQFNVESEPELRAISEIATALGVTA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCEN 169
            I LR+NP V           +  ++ G           +  +     V G+  H   + 
Sbjct: 145 PIALRVNPDVDAKTHEKIATGKSENKFGIPIAKARAVYAEAAKLPGIEVIGVDVHIGSQL 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVK------DFCQRLKE 220
                F A    + +          +I  + LGGG+         +      D+   +  
Sbjct: 205 TDLAPFEAAFTKVRELTLALREDGHKIRRLDLGGGLGIPYHQRSNEAPPLPTDYGAMITR 264

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESA 279
                  +I +EPG  I  N   + T+V+ + E   +N +IVD+++   V   +      
Sbjct: 265 VLGDLGCEIEIEPGRLISGNAGLMVTSVIYLKEGEGRNFLIVDAAMNDLVRPSMYGAHHD 324

Query: 280 TIYPNT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
            +          P    V G  C  GD F +     P+  GD ++F     Y     + +
Sbjct: 325 IVPVIEPAPGLAPQPFDVVGPVCETGDTFTKGRELPPMAEGDLVAFRSAGAYGAVMASEY 384

Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367
           N   +    + + D      +  S+ +     S
Sbjct: 385 NSRPLIPEVLVSGDHFAVIRQRPSFEEMLARDS 417


>gi|300113121|ref|YP_003759696.1| diaminopimelate decarboxylase [Nitrosococcus watsonii C-113]
 gi|299539058|gb|ADJ27375.1| diaminopimelate decarboxylase [Nitrosococcus watsonii C-113]
          Length = 417

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 64/383 (16%), Positives = 124/383 (32%), Gaps = 24/383 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y+  +  + +         +    ++  A+K  +   + D L +   G    S+ E+ 
Sbjct: 29  PCYIYSRAAIEHQWRAFDQAFEEHPHQICYAVKANSNLAVLDILARLGSGFDIVSVGELE 88

Query: 65  LGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--KIG 119
                        ++   K  D    A+          + ++L +  + A KL +   + 
Sbjct: 89  RVLAAGGDPGRIVFSGVGKRTDEMERALAVGIACFNVESEAELLRLNEIAGKLGQRAPVS 148

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLM-------FHNNCENKSF 172
           LR+NP V              ++ G +    +    + V            H   +  S 
Sbjct: 149 LRVNPDVDARTHPYIATGLRDNKFGIEIDQALAVYARAVTLPHIDILGVDCHIGSQLTSL 208

Query: 173 LCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYP---VKDFCQRLKEFSEKYS 226
             F A L+ +     +      ++  I LGGG+    +D      + +   L+E      
Sbjct: 209 SPFLAALERVLALVDQLAKRGIEVRHIDLGGGLGIIYRDEAPPSPQQYAAALREKLAGRD 268

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285
           ++I++EPG AIV N   L T +  + +   KN  IVD+++   +   L       I    
Sbjct: 269 LEIWIEPGRAIVGNGGVLLTRIEYLKQAPQKNFAIVDAAMNDLLRPALYDAWQEIIPVTV 328

Query: 286 GPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                     V G  C  GD  G+      ++ GD +       Y     + +N      
Sbjct: 329 DATREALLFDVVGPVCETGDFLGKQRQLA-IEAGDLLVVRAAGAYGFTMSSNYNSRPRAA 387

Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364
             + +           +    Y 
Sbjct: 388 EIMVDGAEAHLVRERETVESLYE 410


>gi|15603289|ref|NP_246363.1| hypothetical protein PM1424 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12721800|gb|AAK03508.1| LysA [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 416

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 60/390 (15%), Positives = 114/390 (29%), Gaps = 27/390 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K      + + + +   G    S  E
Sbjct: 26  GTPLYIYSRATLERHWHAFNNALGDHPHLICFAVKSNPNIAILNIMARLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +              ++   K     A             +V++L +    A        
Sbjct: 86  LERVLAAGGEPSKIVFSGVAKTETEIARALEVGIRCFNVESVAELYRINQVAGEMGKTAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G    +               + G+  H   +  
Sbjct: 146 ISLRVNPDVDARTHPYISTGLKENKFGISVAEARNVYQLANQLPHIQITGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F         + ++      Q++ + LGGG+          +P +     L +   
Sbjct: 206 ELQPFLDATDRLIVLMEQLKQDGIQLKHLDLGGGLGVPYTNENPPHPSEYASALLDKLKA 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIY 282
            + ++I LEPG AI  N   L T V  +  N      IVD+ +   +   L       I 
Sbjct: 266 YHELEIILEPGRAITANAGILVTKVEYLKHNEDRHFAIVDAGMNDMIRPALYQAYMNIIE 325

Query: 283 PNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +           V G  C   D  G+      +  GD ++      Y  +  + +N  +
Sbjct: 326 VDRTLTRDKAVYDVVGPICETSDFLGKQRELA-IAAGDYLAQRSAGAYGASMSSNYNSRS 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDY--YNNL 366
                + + D      R  +  +      L
Sbjct: 385 RTAEVMVDGDQVHLIRRRETLEELWALERL 414


>gi|90416170|ref|ZP_01224102.1| diaminopimelate decarboxylase [marine gamma proteobacterium
           HTCC2207]
 gi|90331895|gb|EAS47109.1| diaminopimelate decarboxylase [marine gamma proteobacterium
           HTCC2207]
          Length = 421

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 62/385 (16%), Positives = 115/385 (29%), Gaps = 23/385 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+  K  + NN         +    +  A+K  +   +  TL +   G    S+ 
Sbjct: 28  LGTPCYVYSKAAISNNFLAYQSALVDKEHLICYAVKANSNIAVLQTLAELGAGFDIVSIG 87

Query: 62  EVMLG-HEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116
           E+              ++           A+          + ++L      A       
Sbjct: 88  ELERVLRAGGDPAKVVFSGVAKTASEMQRALELGIHCFNVESEAELELLNSTASSCGATA 147

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCE- 168
            + LR+NP V              ++ G          +   +    NV G+  H   + 
Sbjct: 148 AVSLRVNPDVDAQTHPYISTGLKENKFGIDINLAAQVYQRAAQMAHINVVGVDCHIGSQL 207

Query: 169 --NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSE 223
                F+     L  +  E       ++ I +GGG+     D      + +   +     
Sbjct: 208 VDIAPFVSALERLLALVDELAGLGIALKHIDIGGGLGVRYDDEEPPTPQSYMSAILPLLM 267

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
             S  + LEPG +I  N   + T V  +     KN  IVD+++   +   L         
Sbjct: 268 DRSETLVLEPGRSITANAGVMLTQVQYLKSNGEKNFAIVDAAMNDMIRPALYQAWMDIQS 327

Query: 283 PNTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            +TG        V G  C  GD   +      +  GD +       Y     + +N    
Sbjct: 328 ISTGNSESAVYDVVGPVCETGDFLAKDRPLS-ICAGDYLCLMSAGAYGFVMSSNYNSRPR 386

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
               + + D      +  +  D  +
Sbjct: 387 APEVMVDGDQIHLVRQRETIEDLLS 411


>gi|332304598|ref|YP_004432449.1| diaminopimelate decarboxylase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332171927|gb|AEE21181.1| diaminopimelate decarboxylase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 415

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 64/386 (16%), Positives = 124/386 (32%), Gaps = 25/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  K  +  +              +  A+K  +  G+   L +   G    S  E
Sbjct: 26  GTPCYVYSKATIERHWLAFDKAAGAHPHLVCYAVKANSNLGVLSVLAKLGSGFDIVSGGE 85

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKD--KAQKLHKK 117
           ++             ++   K  E  A  +  N       + ++L +      A+     
Sbjct: 86  LLRVIKAGGDPSKVVFSGVGKTPEEIALGLKHNIKCFNVESPAELERISQVAVAENKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           I +R+NP V              ++ G + +  +E            + G+  H   +  
Sbjct: 146 ISIRVNPDVDAKTHPYISTGLKANKFGIEREQAVEVYRHAASLPNLEIKGIDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F   L     +  E       +  + +GGG+  T       +P +      +    
Sbjct: 206 EIAPFVDALDKLLVLIDELAENGITLAHLDVGGGLGVTYKDETPPHPDEYTQAIAQRMQG 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIY 282
           +  +Q+  EPG AI+ N   L T V  + +   KN  IVD+++   +   L     + I 
Sbjct: 266 REDLQLIFEPGRAIMANAGVLLTKVEFLKQGAEKNFAIVDAAMNDLIRPALYSAWQSIIP 325

Query: 283 PNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +T          V G  C  GD  G+      ++ GD ++      Y     + +N   
Sbjct: 326 LDTSLTRDSAVYDVVGPICETGDFIGKERELA-IEAGDYLAVRSAGAYGFVMASNYNSRC 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364
                + + +  I      +  D + 
Sbjct: 385 KAAEIMVDKENVIVVRERETLEDLWR 410


>gi|295108888|emb|CBL22841.1| carboxynorspermidine decarboxylase [Ruminococcus obeum A2-162]
          Length = 404

 Score =  242 bits (618), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 122/378 (32%), Positives = 196/378 (51%), Gaps = 14/378 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           IKTP Y++D++ L+ N      + +  G K+LLA K F+ +  +     Y+ GT +S L+
Sbjct: 24  IKTPCYILDEKALIKNAKLLGEVSERTGCKMLLAQKAFSNYDCYRFFEPYLAGTEASGLF 83

Query: 62  EVMLGHEKFGG-ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           E  LG E+  G E H +   Y+  E + +L   D I+FN+ SQL +F  +A++  K +GL
Sbjct: 84  EARLGAEEMPGKEVHVFCAGYRADEFEELLQYADHIVFNSPSQLLRFGVRAKEAGKSVGL 143

Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSFL 173
           RINP  S      + DP    SR+G       E+  KN      ++GL FH  CE  S  
Sbjct: 144 RINPECSTQEGHDIYDPCASGSRMGTTRAQWDEAFQKNPELLDLLDGLHFHTLCEQDSDD 203

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
                L +++K FG   ++++WI+ GGG H T   Y ++   + ++   E++   +YLEP
Sbjct: 204 -LETTLVSVKKHFGDLASRMKWINFGGGHHITRPGYDIERLERCIRMVQEEWKADVYLEP 262

Query: 234 GEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY---- 288
           GEA   N   L T+VLD+       + IVD+S   H+PD L       +           
Sbjct: 263 GEAWALNAGFLLTSVLDVLKNGETQIAIVDASAACHMPDVLEMPYLPPLLGTDETEESGI 322

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348
           T  + G +CL+GD+ G++ F +  + GD + F D+A Y   + N FNG+ +P I +++ D
Sbjct: 323 TVRLGGPTCLSGDVIGDYKFRQLPEYGDLLMFGDMAIYTTCKNNTFNGMPLPDIWLRHGD 382

Query: 349 GTIKAIREFSYNDYYNNL 366
            T++ + +F Y D+   L
Sbjct: 383 NTMQQLTDFGYMDFKERL 400


>gi|153952120|ref|YP_001398814.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp.
           doylei 269.97]
 gi|152939566|gb|ABS44307.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp.
           doylei 269.97]
          Length = 382

 Score =  242 bits (618), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 137/376 (36%), Positives = 209/376 (55%), Gaps = 18/376 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TP Y++++ KL  N +    + + +G K+LLALK FA  G    + +Y+ G T S L+
Sbjct: 6   IQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSGLW 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E     E    E H Y+ A+K+ EI  + S    I+FN+++Q +KF+  A+     +GLR
Sbjct: 66  EAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQ--AKTQKNSLGLR 123

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
            N   S +   L +P   +SRLG + KD    ++  + GL FH  CE +S      +LK 
Sbjct: 124 CNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLSAIEGLHFHALCE-ESADALETVLKA 182

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            E++FG +I Q++W++ GGG H T K Y V+      K FS+KY VQ+YLEPGEA+   T
Sbjct: 183 FEEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKYGVQVYLEPGEAVGWQT 242

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP---------------NTG 286
             L  +V+DI EN K + I+D+S EAH+PD ++   ++ +                    
Sbjct: 243 GNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNTRILATRENEKISDLKEN 302

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
            +  ++ G +CLAGD+ GE+ F K +KIGD+I F D   Y I +   FNGI +P + + +
Sbjct: 303 EFAYLLTGNTCLAGDVMGEYAFNKKLKIGDKIVFLDQIHYTIVKNTTFNGIRLPNLMLLD 362

Query: 347 VDGTIKAIREFSYNDY 362
               ++ IREFSY DY
Sbjct: 363 HKNELQMIREFSYKDY 378


>gi|57504779|ref|ZP_00370811.1| carboxynorspermidine decarboxylase [Campylobacter coli RM2228]
 gi|305432307|ref|ZP_07401470.1| carboxynorspermidine decarboxylase [Campylobacter coli JV20]
 gi|57019340|gb|EAL56041.1| carboxynorspermidine decarboxylase [Campylobacter coli RM2228]
 gi|304444655|gb|EFM37305.1| carboxynorspermidine decarboxylase [Campylobacter coli JV20]
          Length = 382

 Score =  242 bits (618), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 131/378 (34%), Positives = 207/378 (54%), Gaps = 18/378 (4%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP Y++++ KL  N +    + + +G K+LLALK FA  G    + +Y+ G T S L+E
Sbjct: 7   QTPAYILEEDKLRRNCEILANVGEKSGAKVLLALKGFAFSGAMKVVGEYLKGCTCSGLWE 66

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                E    E H Y+ A+K+ E+  +      I+FN++ Q +KFK      +  +GLR 
Sbjct: 67  AKFAKEYMDKEIHTYSPAFKEDEMSEIAHLSHHIVFNSLYQFDKFKSLC--ANNSLGLRC 124

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           N   S++   L +P   +SRLG   KD    ++  V GL FH  CE +S     A+LK  
Sbjct: 125 NLEFSFAPKELYNPCGKYSRLGILSKDLENFDLSGVEGLHFHALCE-ESADALEAVLKVF 183

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTT 242
           E++FG +I Q++W++ GGG H T + Y ++      K FS+KY VQ+YLEPGEA+   + 
Sbjct: 184 EEKFGKWIKQMKWVNFGGGHHITKQGYDIQKIITLCKNFSDKYGVQVYLEPGEAVGWQSG 243

Query: 243 TLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY---------------PNTGP 287
            L  +V+DI EN K + I+D+S EAH+PD ++   ++ +                     
Sbjct: 244 VLVASVVDIVENEKRIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKISDFKENE 303

Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
           +  ++ G +CLAGD+ GE+ F++ +K GDR+ F D   Y+I +   FNGI +P + + N 
Sbjct: 304 FAYLLTGNTCLAGDVMGEYAFKEELKRGDRVVFLDQIHYSIVKNTTFNGIRLPNLMLLNS 363

Query: 348 DGTIKAIREFSYNDYYNN 365
              ++ +REFSY DY   
Sbjct: 364 KNELEMVREFSYKDYALR 381


>gi|258624952|ref|ZP_05719879.1| carboxynorspermidine decarboxylase [Vibrio mimicus VM603]
 gi|258582808|gb|EEW07630.1| carboxynorspermidine decarboxylase [Vibrio mimicus VM603]
          Length = 387

 Score =  242 bits (618), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 165/368 (44%), Positives = 243/368 (66%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPY++ID+ KL+ NL+ A ++++ +GVK++LALKCF+ WG+FD +  Y+DGTTSS  +
Sbjct: 16  LKTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSGPF 75

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG+E FGGETHAY+V Y + ++  V+  CD +IFN+ SQL  ++   +     +GLR
Sbjct: 76  EVKLGYETFGGETHAYSVGYSEDDVKEVVDICDKMIFNSQSQLAAYRHLVEDKA-SLGLR 134

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP VSY+   LA+P R FSRLG +     E+  + ++G+MFH NCENK    F ++L  
Sbjct: 135 INPGVSYAGQDLANPARKFSRLGVQADHIDENVFETIDGVMFHMNCENKDVDAFISLLDA 194

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I + FG  + +++W+SLGGG+ FT   Y V      LK FSE++ VQ+YLEPGEA++T T
Sbjct: 195 ISERFGRHLDKLDWVSLGGGVFFTWPGYDVDKLGAALKAFSERHGVQLYLEPGEAVITKT 254

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299
           T L  TV+DI EN     IVDS+ EAH  D L+Y+E A++    + G +  ++   SCLA
Sbjct: 255 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASDNGQHEYVIGSCSCLA 314

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F    F++P+K+G ++   D AGY + + NWFNG+ MP++  +  +G I+ I +F Y
Sbjct: 315 GDQFCVAKFDEPLKVGQKLHILDSAGYTMVKLNWFNGLKMPSVYCERQNGEIQKINQFGY 374

Query: 360 NDYYNNLS 367
            D+   LS
Sbjct: 375 EDFKRTLS 382


>gi|254478073|ref|ZP_05091456.1| diaminopimelate decarboxylase [Carboxydibrachium pacificum DSM
           12653]
 gi|214035935|gb|EEB76626.1| diaminopimelate decarboxylase [Carboxydibrachium pacificum DSM
           12653]
          Length = 447

 Score =  242 bits (618), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 74/400 (18%), Positives = 134/400 (33%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ID+  L  N        K+   +  ++ A K F    M   + Q   G    S 
Sbjct: 29  GTPLYVIDEDVLRANSRIFYNALKSHNPENEVVYAGKAFLTTAMCKIIQQEGLGLDVVSG 88

Query: 61  YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E   ++     ++  I A+ S    II +   +L   +  A+KL+K+
Sbjct: 89  GELYTALKAGFPTEKIYFHGNNKSEEELIMALQSEVGRIIIDNWDELELLEILAKKLNKE 148

Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
               +R+ P +           +  S+ G            K  + S      GL  H  
Sbjct: 149 PAIYIRVTPGIEAHTHRYIMTGQIDSKFGFTISNGEAFKAVKRALTSGSLKFKGLHCHIG 208

Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            +      +   +K + +            +E + LGGG      +       + +    
Sbjct: 209 SQILESTPYKIAVKIMLELLKEIKDTLGRGVEELDLGGGFGIPYVEDDSYQPVEEMLRDI 268

Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
            +              +I +EPG AI+ NT      V  + E    +  V VD  +  ++
Sbjct: 269 LEELEAQVSLLKVKLPKIIVEPGRAIIGNTGITLYKVGGVKEIPGVRKYVFVDGGMSDNI 328

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L         A    N       + G+ C +GD+         VK GD I+  +   
Sbjct: 329 RTALYGARYSAVIANRVYNGRLEKVTIAGKLCESGDVIIWDILLPEVKKGDIIAVLNTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  + +N +  P + + +       ++  +Y D   N
Sbjct: 389 YGYSMASNYNRLPKPAVILVSKGKAEIIVKRETYEDVIKN 428


>gi|20806736|ref|NP_621907.1| diaminopimelate decarboxylase [Thermoanaerobacter tengcongensis
           MB4]
 gi|20515193|gb|AAM23511.1| Diaminopimelate decarboxylase [Thermoanaerobacter tengcongensis
           MB4]
          Length = 447

 Score =  242 bits (618), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 74/400 (18%), Positives = 134/400 (33%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ID+  L  N        K+   +  ++ A K F    M   + Q   G    S 
Sbjct: 29  GTPLYVIDEDVLRANSRIFYNALKSHNPENEVVYAGKAFLTTAMCKIIQQEGLGLDVVSG 88

Query: 61  YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E   ++     ++  I A+ S    II +   +L   +  A+KL+K+
Sbjct: 89  GELYTALKAGFPTEKIYFHGNNKSEEELIMALQSEVGRIIIDNWDELELLEILAKKLNKE 148

Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
               +R+ P +           +  S+ G            K  + S      GL  H  
Sbjct: 149 PAIYIRVTPGIEAHTHRYIMTGQIDSKFGFTISNGEAFKAVKRALTSGSLKFKGLHCHIG 208

Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            +      +   +K + +            +E + LGGG      +       + +    
Sbjct: 209 SQILESTPYKIAVKIMLELLKEIKDTLGRGVEELDLGGGFGIPYVEDDSYQPVEEMLRDI 268

Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
            +              +I +EPG AI+ NT      V  + E    +  V VD  +  ++
Sbjct: 269 LEELEAQVSLLKIKLPKIIVEPGRAIIGNTGITLYKVGGVKEIPGVRKYVFVDGGMSDNI 328

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L         A    N       + G+ C +GD+         VK GD I+  +   
Sbjct: 329 RTALYGARYSAVIANRVYNGRLEKVTIAGKLCESGDVIIWDILLPEVKKGDIIAVLNTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  + +N +  P + + +       ++  +Y D   N
Sbjct: 389 YGYSMASNYNRLPKPAVILVSKGKAEIIVKRETYEDVIKN 428


>gi|296314185|ref|ZP_06864126.1| diaminopimelate decarboxylase [Neisseria polysaccharea ATCC 43768]
 gi|296839164|gb|EFH23102.1| diaminopimelate decarboxylase [Neisseria polysaccharea ATCC 43768]
          Length = 406

 Score =  242 bits (618), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 67/385 (17%), Positives = 128/385 (33%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L    +            +  A+K      +         G    S  E
Sbjct: 18  GTPLYVYSQSALTEAFEHYQTAFAALNPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77

Query: 63  VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G   +T    V   + EI+ A+ +        ++ ++++ +  A +L     
Sbjct: 78  LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAS 137

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D +E+           + G+  H   +  
Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLT 197

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                    + I             +E + LGGG+    +D     +  + Q +++    
Sbjct: 198 DLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDENVPDLGAYAQAVQKLIGT 257

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++ LEPG ++V N  +L T V  +     KN V+VD+++   +   L          
Sbjct: 258 RRLKLILEPGRSLVGNAGSLLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317

Query: 284 NTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
            T      TA + G  C  GD  G+       + GD +       Y  +  + +N  N  
Sbjct: 318 ETKDIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNARNRA 376

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + + DG     R  +      N
Sbjct: 377 AEVLVDGDGYKLIRRRETLEQQMAN 401


>gi|56695249|ref|YP_165597.1| diaminopimelate decarboxylase [Ruegeria pomeroyi DSS-3]
 gi|56676986|gb|AAV93652.1| diaminopimelate decarboxylase [Ruegeria pomeroyi DSS-3]
          Length = 421

 Score =  242 bits (618), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 59/390 (15%), Positives = 124/390 (31%), Gaps = 26/390 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P+Y+     LL +              +  A+K  +   +  TL Q   G    S+ 
Sbjct: 25  VGSPFYVYSTATLLRHFQLFDEALDGTDHLICYAMKAASNQAILRTLAQAGAGMDVVSVG 84

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116
           E +        G    ++   K  E    A++         +  ++      A +L K  
Sbjct: 85  EYLRARAAGVPGVRIVFSGVGKTAEEIRVALVGGIRQFNVESEPEMEVINAIALELGKVA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            I +R+NP V           +  ++ G           +        V G+  H   + 
Sbjct: 145 PITIRVNPDVDAKTHAKIATGKSENKFGIPIARASAVYAQAAALPGLEVVGIDVHIGSQL 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221
                F    + + +           I  + LGGG+               ++   +K  
Sbjct: 205 TDLAPFETAYRKVAELTERLRAEGHDIRRLDLGGGLGIPYTRSNEAPPLPMEYGALIKRT 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280
                 +I +EPG  I  N   + + V+ +     ++ +I+D+++   +   +       
Sbjct: 265 LGHLGCEIEIEPGRLIAGNAGLMVSKVIYVKSGEGRDFLILDAAMNDLIRPAMYDAHHDI 324

Query: 281 IYPNT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +          P    + G  C +GD F +     P+  GD ++F     Y     + +N
Sbjct: 325 VPVVEPEPGVEPQPYDIVGPVCESGDTFAKARMMPPLAAGDLVAFRSAGAYGAVMSSEYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              +    + + D         S+++  N 
Sbjct: 385 SRPLIPEVLVHGDQFAVIRPRPSFDEMINR 414


>gi|56420835|ref|YP_148153.1| diaminopimelate decarboxylase [Geobacillus kaustophilus HTA426]
 gi|56380677|dbj|BAD76585.1| diaminopimelate decarboxylase [Geobacillus kaustophilus HTA426]
          Length = 439

 Score =  242 bits (618), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 59/399 (14%), Positives = 120/399 (30%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   +           +  GV+  +  A K F+A  +     +        S 
Sbjct: 30  GTPLYIYDVALIRARARAFKEAFQRHGVRAQVAYASKAFSAVAIVQLAAEEGLSLDVVSG 89

Query: 61  YEVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F  E   ++     +D    A+      I+ +   +L   ++ A      
Sbjct: 90  GELYTALAAGFPPERIHFHGNNKSRDELAMALEHGIGCIVADNFYELELIEELAASCGRT 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             + LR+ P V           +  S+ G         E  +  + S    + G+  H  
Sbjct: 150 VPVLLRVTPGVEAHTHDYILTGQEDSKFGFDLNNGQADEAFRRVMASAAFQLLGVHCHIG 209

Query: 167 CENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC------- 215
            +      F      +   + +           ++LGGG      +              
Sbjct: 210 SQIFETAGFVLAAQKVFAKLAEWNKEHGFVPAVVNLGGGFGIRYTEEDDPIPVTAYVDCI 269

Query: 216 -QRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            + +K  +E       +I++EPG ++V +  T   T+    E       +     +  ++
Sbjct: 270 VEEVKRQAEACRLPLPEIWIEPGRSLVGDAGTTIYTIGSRKEVPNVRTYIAVDGGMSDNI 329

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +     A            + G+ C +GD+          K GD ++      
Sbjct: 330 RPALYGAKYEAALANRVFGEPTEVVSIAGKCCESGDMLIWDIALPEAKPGDYLAVFCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  N +N +  P +           ++  +Y D   
Sbjct: 390 YGYSMANNYNRLPRPAVVFVENGDAQLVVKRETYEDLIQ 428


>gi|297787804|pdb|3N29|A Chain A, Crystal Structure Of Carboxynorspermidine Decarboxylase
           Comp Norspermidine From Campylobacter Jejuni
 gi|297787805|pdb|3N29|B Chain B, Crystal Structure Of Carboxynorspermidine Decarboxylase
           Comp Norspermidine From Campylobacter Jejuni
          Length = 418

 Score =  242 bits (617), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 138/376 (36%), Positives = 210/376 (55%), Gaps = 18/376 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TP Y++++ KL  N +    + + +G K+LLALK FA  G    + +Y+ G T S L+
Sbjct: 42  IQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSGLW 101

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E     E    E H Y+ A+K+ EI  + S    I+FN+++Q +KF+ K       +GLR
Sbjct: 102 EAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQSK--TQKNSLGLR 159

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
            N   S +   L +P   +SRLG + KD    ++  + GL FH  CE +S     A+LK 
Sbjct: 160 CNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLNAIEGLHFHALCE-ESADALEAVLKV 218

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            E++FG +I Q++W++ GGG H T K Y V+      K FS+KY VQ+YLEPGEA+   T
Sbjct: 219 FEEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKYGVQVYLEPGEAVGWQT 278

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP---------------NTG 286
             L  +V+DI EN K + I+D+S EAH+PD ++   ++ +                    
Sbjct: 279 GNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKISDLKEN 338

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
            +  ++ G +CLAGD+ GE+ F+K +KIGD+I F D   Y I +   FNGI +P + + +
Sbjct: 339 EFAYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIHYTIVKNTTFNGIRLPNLMLLD 398

Query: 347 VDGTIKAIREFSYNDY 362
               ++ IREFSY DY
Sbjct: 399 HKNELQMIREFSYKDY 414


>gi|109900371|ref|YP_663626.1| diaminopimelate decarboxylase [Pseudoalteromonas atlantica T6c]
 gi|109702652|gb|ABG42572.1| diaminopimelate decarboxylase [Pseudoalteromonas atlantica T6c]
          Length = 415

 Score =  242 bits (617), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 64/386 (16%), Positives = 123/386 (31%), Gaps = 25/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  K  +  +              +  A+K  +  G+   L +   G    S  E
Sbjct: 26  GTPCYVYSKATIERHWLAFDKAAGAHPHLVCYAVKANSNLGVLSVLAKLGSGFDIVSGGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKD--KAQKLHKK 117
           ++             ++   K  E  A  +  N       + ++L +      A+     
Sbjct: 86  LLRVLKAGGDPTKVVFSGVGKTPEEIALGLQHNIKCFNVESPAELERISQVAVAENKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           I +R+NP V              ++ G + +  +E            + G+  H   +  
Sbjct: 146 ISIRVNPDVDAKTHPYISTGLKANKFGIEREQAVEVYRHAASLPNLEIKGIDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F   L     +  E       +  + +GGG+  T       +P +      +    
Sbjct: 206 EIAPFVDALDKLLVLIDELAENGITLAHLDVGGGLGVTYKDETPPHPDEYTQAIAQRMQG 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIY 282
           +  +Q+  EPG AI+ N   L T V  + +   KN  IVD+++   +   L     + I 
Sbjct: 266 REDLQLIFEPGRAIMANAGVLLTKVEFLKQGAEKNFAIVDAAMNDLIRPALYSAWQSIIP 325

Query: 283 PNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +T          V G  C  GD  G+      +  GD ++      Y     + +N   
Sbjct: 326 LDTSLTRDSAVYDVVGPICETGDFIGKERELA-IDAGDYLAVRSAGAYGFVMASNYNSRC 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364
                + + D  +      +  D + 
Sbjct: 385 KAAEIMVDKDQVMVVRERETLEDLWR 410


>gi|254226118|ref|ZP_04919715.1| carboxynorspermidine decarboxylase [Vibrio cholerae V51]
 gi|125621353|gb|EAZ49690.1| carboxynorspermidine decarboxylase [Vibrio cholerae V51]
          Length = 387

 Score =  242 bits (617), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 167/368 (45%), Positives = 246/368 (66%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPY++ID+ KL+ NL+ A ++++ +GVK++LALKCF+ WG+FD +  Y+DGTTSS  +
Sbjct: 16  LKTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSGPF 75

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG+E FGGETHAY+V Y + ++  V+  CD +IFN+ SQL  ++   +     +GLR
Sbjct: 76  EVKLGYETFGGETHAYSVGYSEEDVKEVIDICDKMIFNSQSQLAAYRHLVEGKV-SLGLR 134

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP VSY+   LA+P R FSRLG +     ES   ++NG+MFH NCENK    F  +L  
Sbjct: 135 INPGVSYAGQDLANPARQFSRLGVQADHIDESVFDSINGVMFHMNCENKDVDAFIGLLDA 194

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I + FG ++ +++W+SLGGG+ FT   Y V+     LK F+E+++VQ+YLEPGEAI+T T
Sbjct: 195 ISERFGRYLDKLDWVSLGGGVFFTWPGYDVEKLGAALKAFAERHAVQLYLEPGEAIITKT 254

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299
           T L  TV+DI EN     IVDS+ EAH  D L+Y+E A++    + G +  ++   SCLA
Sbjct: 255 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASDNGQHEYVIGSCSCLA 314

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F    F++P+++G ++   D AGY + + NWFNG+ MP++  +  +G I+ I +FSY
Sbjct: 315 GDQFCVAKFDEPLQVGQKLHILDSAGYTMVKLNWFNGLKMPSVYCERKNGQIQKINQFSY 374

Query: 360 NDYYNNLS 367
            D+   LS
Sbjct: 375 EDFKRTLS 382


>gi|254000301|ref|YP_003052364.1| diaminopimelate decarboxylase [Methylovorus sp. SIP3-4]
 gi|253986980|gb|ACT51837.1| diaminopimelate decarboxylase [Methylovorus sp. SIP3-4]
          Length = 415

 Score =  242 bits (617), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 60/383 (15%), Positives = 116/383 (30%), Gaps = 23/383 (6%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP Y+  +Q L                 +  A+K   + G+     +   G    S  E+
Sbjct: 27  TPCYVYSRQALETAYRDFQQGFAGVDHLVCFAVKANPSLGVLSVFAKLGAGFDIVSGGEL 86

Query: 64  MLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKI 118
                         ++   K  D    A+ +        + ++L +  + A        +
Sbjct: 87  ARVLAAGGDASKVVFSGVGKTADEMRAALTAGIFCFNVESAAELERLNEVAGSMGKIAPV 146

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENKS 171
            LR+NP+V              ++ G   +               +V+G+  H   +   
Sbjct: 147 SLRVNPNVDAKTHPYISTGLKNNKFGVAYEQSLALYQQAAAMPNIDVHGVDCHIGSQLTE 206

Query: 172 FLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEKY 225
              F      +     +       I  I  GGGI     +        +   + +     
Sbjct: 207 LSPFLDAFDRVLALVDQLEAAGIAIRHIDAGGGIGICYNEETPPDFAAYAAAMLKKLGDR 266

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQES---ATI 281
            V++  EPG A+V N   L T V  +     KN  IVD+++   +   L           
Sbjct: 267 KVKLVFEPGRALVGNAGALLTRVEYLKHTEAKNFAIVDAAMNDLMRPALYDAYHQIAEVS 326

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
              T      + G  C +GD  G       +K GD ++      Y ++  + +N      
Sbjct: 327 PDATPKEIYEIVGPVCESGDFLGHDREL-GLKQGDLLAILSAGAYGMSMSSNYNTRPRAA 385

Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364
             + +        +  S ++ + 
Sbjct: 386 EVMVDGASYQLIRKRESISELFA 408


>gi|198284947|ref|YP_002221268.1| diaminopimelate decarboxylase [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218666233|ref|YP_002427632.1| diaminopimelate decarboxylase [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|198249468|gb|ACH85061.1| diaminopimelate decarboxylase [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218518446|gb|ACK79032.1| diaminopimelate decarboxylase [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 419

 Score =  242 bits (617), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 56/381 (14%), Positives = 109/381 (28%), Gaps = 24/381 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L     +      +   ++  A+K  +  G+     +   G    S  E
Sbjct: 26  GTPCYVYSEAALRERYHSFSAALGD-NTRVCYAVKANSNLGILRIFAEMGAGFDIVSGGE 84

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKA--QKLHKK 117
           +           T  ++   K                   + ++L +  D A        
Sbjct: 85  LERVLRAGGDAGTIVFSGVGKSSVEIRAALGAGIFCLNVESAAELWRIADIAADMGKRAP 144

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN- 169
           + LR+NP V              S+ G          ++        + G+  H   +  
Sbjct: 145 VALRVNPDVDPGTHRYIATGLKESKFGIPMDQARHLYLQAAQHPALELKGIACHIGSQLL 204

Query: 170 --KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEK 224
                   +  ++ +  E       ++ + LGGG+     D            L +  + 
Sbjct: 205 DLTPLGEAAGRVRALYDELAAHGIALQHLDLGGGVGIRYHDEIPPSPADYAWTLDQALQG 264

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES---AT 280
            +V+  +E G A+  N   L T V  + +N      V D+++   +   L          
Sbjct: 265 VAVRRVVELGRALAGNAGVLLTKVEYLKDNGGKQFCVVDAAMNDLLRPALYGAWHDILPL 324

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                      V G  C +GD           K GD ++      Y     + +N    P
Sbjct: 325 HQSVGTGPAMDVVGPVCESGDFLARDRPLA-AKAGDLLAVMSAGAYGFAMSSNYNSRPRP 383

Query: 341 TIAVKNVDGTIKAIREFSYND 361
              + +        R  +  D
Sbjct: 384 PEVLISGHQHRLIRRRETLAD 404


>gi|152977874|ref|YP_001343503.1| diaminopimelate decarboxylase [Actinobacillus succinogenes 130Z]
 gi|150839597|gb|ABR73568.1| diaminopimelate decarboxylase [Actinobacillus succinogenes 130Z]
          Length = 415

 Score =  242 bits (617), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 71/383 (18%), Positives = 122/383 (31%), Gaps = 24/383 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  K  L  +         +    +  A+K  +   +  T+ +   G    S  E
Sbjct: 26  GTPLYVYSKATLERHWHAFDDAFGDYPHLICFAVKSNSNIAVLQTMARLGSGFDIVSQGE 85

Query: 63  VMLGHE--KFGGETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +          G+     VA  + E   A+          ++ +L +  + A KL K   
Sbjct: 86  LERVLAAGGDPGKVVFSGVAKTETEITRALEVGIRCFNVESIPELYRINEVAGKLGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G       E            V G+  H   +  
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVDQAREVYRRAAELPHIAVTGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
               F         + ++      Q++ + LGGG+  T  +        +   L +  + 
Sbjct: 206 ELQPFLDAADRLVVLMEQLKQDGVQLKHLDLGGGLGVTYSNETPPHPTDYATALLQKLQA 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIYP 283
           Y+++I LEPG AI  N   L T V  +  N  +   IVD+ +   +   L       I  
Sbjct: 266 YNLEIILEPGRAICANAGVLVTKVEYLKSNETHNFAIVDAGMNDMIRPALYEAYMNIIEA 325

Query: 284 ----NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       V G  C   D  G+      +  GD +       Y  +  + +N    
Sbjct: 326 DRTLPRAKAVYDVVGPICETSDFLGKKRELA-IAAGDYLVQRSAGAYGASMSSNYNSRPR 384

Query: 340 PTIAVKNVDGTIKAIREFSYNDY 362
               + + D      R  SY + 
Sbjct: 385 TAEVMVDGDKAFLIRRRESYQNL 407


>gi|254461301|ref|ZP_05074717.1| diaminopimelate decarboxylase [Rhodobacterales bacterium HTCC2083]
 gi|206677890|gb|EDZ42377.1| diaminopimelate decarboxylase [Rhodobacteraceae bacterium HTCC2083]
          Length = 433

 Score =  242 bits (617), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 55/390 (14%), Positives = 122/390 (31%), Gaps = 26/390 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+     L  +        +     +  A+K  +   +  TL     G    S  
Sbjct: 37  VGTPFYVYSTATLERHFKLFDDALEGTEHLVCYAMKAASNQAILKTLAALGAGMDVVSGG 96

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116
           E          GE   ++   K       A+          +  ++    + A  L    
Sbjct: 97  EYARAKAAGVPGERIVFSGIGKTRAEVHQALTGGIRQFNVESEPEMQVISEIATALDVIA 156

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-----IESEIKNVNGLMFHNNCENK- 170
            I +R+NP V           +  ++ G           + + +  +  +    +  ++ 
Sbjct: 157 PITIRVNPDVDAKTHAKIATGKSENKFGIPISRAREVYALAASLPGLKVIGIDVHIGSQL 216

Query: 171 ----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK-----DYPVKDFCQRLKEF 221
                F      +  + ++      +I  + LGGG+               D+   +K+ 
Sbjct: 217 IDLAPFEAAYNKVAELTEQLRADGHEISRLDLGGGLGIPYARSNEAPPSPTDYGALIKKC 276

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                 +I +EPG  I  N   L + V+ +     +  +I+D ++   +   +       
Sbjct: 277 VGHLGCEIEIEPGRLIAGNAGLLVSEVIYVKSGEDREFLIIDGAMNDLIRPAMYDAHHDI 336

Query: 281 IYPNTG-----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +          P    + G  C +GD F +     P+K G+ ++F     Y     + +N
Sbjct: 337 VPVVESEVGVLPTPYDIVGPVCESGDTFAKGRQMPPLKAGNLVAFRSAGAYGAVMASEYN 396

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              +    +   D         ++++  N 
Sbjct: 397 TRPLIPEVLVKGDQFAVIRPRPTFDEMINR 426


>gi|71065473|ref|YP_264200.1| pyridoxal-dependent decarboxylase [Psychrobacter arcticus 273-4]
 gi|71038458|gb|AAZ18766.1| probable pyridoxal-dependent decarboxylase [Psychrobacter arcticus
           273-4]
          Length = 417

 Score =  242 bits (617), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 195/399 (48%), Positives = 253/399 (63%), Gaps = 34/399 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TPYYL+D+  ++ N+     + + +G K LLALKCFA WG+FD +  Y+ GTTSSSL E
Sbjct: 19  PTPYYLLDEAAIVANMQIIARLCELSGAKALLALKCFATWGVFDVMEPYLHGTTSSSLNE 78

Query: 63  VMLGHEKFG----------GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112
           V LG+E FG           ETHAY+VAY   E+  VL+  D IIFN++SQLN FK++A 
Sbjct: 79  VRLGYESFGNNSDASSQDKKETHAYSVAYSADEMPEVLNYADKIIFNSISQLNAFKEQAA 138

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF 172
             +  +GLR+NP  S S FI+ADP RPFSRLGE  KDKI + + +++G+M HNNCEN SF
Sbjct: 139 AKNIPVGLRLNPKTSNSSFIIADPARPFSRLGEHDKDKIAAVLSDISGVMIHNNCENDSF 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232
             FS  L +IE  FG  + Q+EW+SLGGGIHF   DYP++    RLK FSE Y VQ+YLE
Sbjct: 199 EAFSESLADIETRFGDVLQQLEWVSLGGGIHFIAPDYPLEKLADRLKGFSENYGVQVYLE 258

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----------- 281
           PGEA +    TL T+VLD   N KNL +VDSS+EAH+ D L+Y+ESA I           
Sbjct: 259 PGEASIHGAGTLVTSVLDTMHNEKNLAVVDSSIEAHMLDLLIYRESAPIAAINSDLINIA 318

Query: 282 -------------YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
                                 ++ GRSCLAGDIFGE+     +KIGD ++F + AGY +
Sbjct: 319 SLDIDPTNIAPISENAKSADNTIIYGRSCLAGDIFGEYALPNNLKIGDTVTFGNAAGYTM 378

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367
            +KNWFNG+NMP I ++ +DG+I   REF Y DY  +LS
Sbjct: 379 VKKNWFNGVNMPAIVIRRLDGSIDIQREFDYQDYKASLS 417


>gi|144899443|emb|CAM76307.1| Diaminopimelate decarboxylase [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 421

 Score =  242 bits (617), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 67/389 (17%), Positives = 116/389 (29%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           + TP+Y      L+ +          AG   ++  ALK      +  T  Q   G    S
Sbjct: 25  VGTPFYCYSTATLVRHYTVFTQALAEAGLDAQVCFALKANPNVAVVRTFAQLGAGADVVS 84

Query: 60  LYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKA--QKL 114
             E+          +   ++   K               I   +  +L      A  + +
Sbjct: 85  EGELRRALAAGVPVDRIVFSGVGKTEAELTFAVAKGIMQINVESEPELEALSKIAAARGI 144

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNC 167
              I LR+NP V           +  ++ G +     E   K        V G+  H   
Sbjct: 145 RMPIALRVNPDVDAGTHAKITTGKKENKFGIEWTRAHEVYNKARALPGIEVVGIACHIGS 204

Query: 168 ENKSFLCFSAML---KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEF 221
           +      F       +++          I  + LGGG+    +         + + +K+ 
Sbjct: 205 QLTDVEPFRQAFLRVRDLVAMLRADGFNIRRLDLGGGLGIPYESEEPPHPAVYAKAIKDT 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESAT 280
                 +I LEPG  +V N   L + V+ + E       I D+++   +   L       
Sbjct: 265 LGDLGCKIVLEPGRLLVGNAGILVSRVVYVKEGATRTFLIADAAMNDLMRPALYEAHHTI 324

Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                           V G  C  GD F +     P+K GD I F     Y     + +N
Sbjct: 325 EPVIEPAKDAPRLPVDVVGPVCETGDTFAKQRSLPPIKAGDLIVFRTAGAYGAAMSSTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    +   D         S++D   
Sbjct: 385 TRPLVPEVLVKDDSFAVVRARPSFDDMLA 413


>gi|281422911|ref|ZP_06253910.1| carboxynorspermidine decarboxylase [Prevotella copri DSM 18205]
 gi|281403041|gb|EFB33721.1| carboxynorspermidine decarboxylase [Prevotella copri DSM 18205]
          Length = 391

 Score =  241 bits (616), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 115/378 (30%), Positives = 201/378 (53%), Gaps = 17/378 (4%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y++++++L +NL     + + A ++++LA K +A W  F    +Y+  TT+SSL E  
Sbjct: 14  PIYVLEEERLRHNLSLIRSVAERADMEIILAFKAYALWKTFPIFREYISSTTASSLSEAK 73

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI--GLRI 122
           L + +FG + H ++ AY D EID +      + FN+++Q  ++ ++A++ +  I  GLR+
Sbjct: 74  LAYHEFGSKAHTFSPAYTDYEIDEIAQCSSHLTFNSLTQYERYHERARRANSDIRLGLRV 133

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           NP  S    +L +P  P +R G       ++   ++ G   H +CE+     F   L +I
Sbjct: 134 NPEYSEVGTLLYNPCAPGTRFGVSADKLPQTLPSDIEGFHCHCHCESG-ADVFERTLAHI 192

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNT 241
           E++F  +  Q++WI+ GGG   T KDY V+     +K F ++Y   +I +EPG A    T
Sbjct: 193 EEKFSPWFPQLKWINFGGGHLMTRKDYDVEHLINIIKGFHQRYPHLKIIMEPGSAFGWQT 252

Query: 242 TTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIYP------------NTGPY 288
             L T V+D+ E+      I+++S   H+PD L       +                G +
Sbjct: 253 GPLVTQVVDVVEDKGIRTAIINASFTCHMPDCLEMPYMPAVRNAETLEVDDPTKAPEGAH 312

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348
              + G SCL+GD  G + F+  ++IG+ + FED+  Y   + N FNGI  P+I + ++D
Sbjct: 313 IYRIGGNSCLSGDFMGFWKFDHELQIGENVIFEDMLHYTTVKTNTFNGITHPSIGIVHLD 372

Query: 349 GTIKAIREFSYNDYYNNL 366
           G ++ +R+FSY DY + +
Sbjct: 373 GKLETLRDFSYEDYRSRM 390


>gi|297579203|ref|ZP_06941131.1| carboxynorspermidine decarboxylase [Vibrio cholerae RC385]
 gi|297536797|gb|EFH75630.1| carboxynorspermidine decarboxylase [Vibrio cholerae RC385]
          Length = 387

 Score =  241 bits (616), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 165/368 (44%), Positives = 244/368 (66%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPY++ID+ KL+ NL+ A ++++ +GVK++LALKCF+ WG+FD +  Y+DGTTSS  +
Sbjct: 16  LKTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSGPF 75

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG+E FGGETHAY+V Y + ++  V+  CD +IFN+ SQL  ++   +     +GLR
Sbjct: 76  EVKLGYETFGGETHAYSVGYSEEDVKEVIDICDKMIFNSQSQLAAYRHLVEGKVS-LGLR 134

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP VSY+   LA+P R FSRLG +     E    ++NG+MFH NCENK    F  +L  
Sbjct: 135 INPGVSYAGQDLANPARQFSRLGVQADHIDEIVFDSINGVMFHMNCENKDVDAFIGLLDA 194

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I + FG ++ +++W+SLGGG+ FT   Y V+     LK F+E+++VQ+YLEPGEAI+T T
Sbjct: 195 ISERFGRYLDKLDWVSLGGGVFFTWPGYDVEKLGAALKAFAERHAVQLYLEPGEAIITKT 254

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299
           T L  TV+DI EN     IVDS+ EAH  D L+Y+E A++    + G +  ++   SCLA
Sbjct: 255 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASDKGQHEYVIGSCSCLA 314

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F    F++P+++G ++   D AGY + + NWFNG+ MP++  +  +G I+ I +F Y
Sbjct: 315 GDQFCVAKFDEPLQVGQKLHILDSAGYTMVKLNWFNGLKMPSVYCERKNGQIQKINQFGY 374

Query: 360 NDYYNNLS 367
            D+   LS
Sbjct: 375 EDFKRTLS 382


>gi|86152555|ref|ZP_01070760.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|85843440|gb|EAQ60650.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp.
           jejuni HB93-13]
          Length = 382

 Score =  241 bits (616), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 138/376 (36%), Positives = 210/376 (55%), Gaps = 18/376 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TP Y++++ KL  N +    + + +G K+LLALK FA  G    + +Y+ G T S L+
Sbjct: 6   IQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSGLW 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E     E    E H Y+ A+K+ EI  + S    I+FN+++Q +KF+ K       +GLR
Sbjct: 66  EAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQSK--TQKNSLGLR 123

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
            N   S +   L +P   +SRLG + KD    ++  + GL FH  CE +S     A+LK 
Sbjct: 124 CNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLNAIEGLHFHALCE-ESADALEAVLKV 182

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            E++FG +I Q++W++ GGG H T K Y V+      K FS+KY VQ+YLEPGEA+   T
Sbjct: 183 FEEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKYGVQVYLEPGEAVGWQT 242

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP---------------NTG 286
             L  +V+DI EN K + I+D+S EAH+PD ++   ++ +                    
Sbjct: 243 GNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKISDLKEN 302

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
            +  ++ G +CLAGD+ GE+ F+K +KIGD+I F D   Y I +   FNGI +P + + +
Sbjct: 303 EFAYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIHYTIVKNTTFNGIRLPNLMLLD 362

Query: 347 VDGTIKAIREFSYNDY 362
               ++ IREFSY DY
Sbjct: 363 HKNELQMIREFSYKDY 378


>gi|114330425|ref|YP_746647.1| diaminopimelate decarboxylase [Nitrosomonas eutropha C91]
 gi|114307439|gb|ABI58682.1| diaminopimelate decarboxylase [Nitrosomonas eutropha C91]
          Length = 417

 Score =  241 bits (616), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 60/384 (15%), Positives = 114/384 (29%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+     +     +           +  A+K  +   + + L +   G    S  E
Sbjct: 29  GTPCYVYSSAAIRTAYQSFDRAFGQRNHLICYAVKANSNLAVLNLLARLGSGFDIVSGGE 88

Query: 63  VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +          +   ++   K  E    A+ +N       +  +L    + A ++ K   
Sbjct: 89  LQRVLKAGGDLQKTVFSGVGKTFEEIRIALAANIFCFNVESEMELIALNEIAGQMGKIAP 148

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           + LR+NP V  +           ++ G    +               V+GL  H   +  
Sbjct: 149 VSLRVNPDVDANTHPYISTGMKENKFGIPAAEAERIYAIAQQLPYIRVSGLDCHIGSQLT 208

Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS---EK 224
               F      +             IE + LGGG+             + +K      E 
Sbjct: 209 EIAPFIEAAHKMLDLLARLQATGISIEHLDLGGGLGVRYDLEIPPTIEEYVKALCAATEN 268

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
           Y  Q+ +EPG ++V N   L T V  +         +  +    +    LYQ   +I P 
Sbjct: 269 YPQQLLIEPGRSMVGNAGLLLTRVHYLKHAPHRNFAIVDAAMNDMLRPALYQAYHSILPI 328

Query: 285 TGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                      + G  C  GD  G       ++  D ++      Y ++  + +N     
Sbjct: 329 AKRTGETKIYQIVGPVCETGDFLGHDRNL-TLESNDLLAVMSAGAYGMSMSSNYNTRPRA 387

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + +           +  D Y 
Sbjct: 388 VEVMVDGSSVHLIRARETIEDLYA 411


>gi|110635369|ref|YP_675577.1| diaminopimelate decarboxylase [Mesorhizobium sp. BNC1]
 gi|110286353|gb|ABG64412.1| diaminopimelate decarboxylase [Chelativorans sp. BNC1]
          Length = 421

 Score =  241 bits (616), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 62/389 (15%), Positives = 120/389 (30%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +              +  A+K  +   +  TL     G    S  
Sbjct: 25  VGTPFYCYSTATLERHYRVFSEALSGLDALVCYAMKANSNQAVLKTLGNLGAGADVVSQG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHK 116
           E+              ++   K  +    A+ +        ++ +L     + +A  +  
Sbjct: 85  ELRRALAAGIPANKILFSGVGKTGEEMDFALSAGILCFNVESLPELELLSARARAIGVKA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            + LRINP V           +  ++ G   KD   +  +        V G+  H   + 
Sbjct: 145 PVSLRINPDVDAKTHKKISTGKSENKFGIPWKDARAAYARAASLPGLEVTGIDMHIGSQI 204

Query: 170 KSFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221
                F         + +        I+ + LGGG+    ++          + + ++  
Sbjct: 205 TELQPFDQAFALLTELTETLRADGHAIKHVDLGGGLGVPYREDNEPPPLPDAYAEVVRRH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
             +  +++  EPG  IV N   L + VL + E   KN +I+D+++   +   L       
Sbjct: 265 VTRLGLKVIFEPGRLIVGNAGVLISRVLYLKEGEGKNFLIIDAAMNDLIRPTLYDAYHTI 324

Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                         A V G  C  GD          ++ GD I+      Y     + +N
Sbjct: 325 RPVAEPAADAPHLKADVVGPVCETGDFLALDRDLPRMEPGDLIAVGTAGAYGAVLSSTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    + N D         +Y     
Sbjct: 385 SRLLVPEVLVNGDRFHIVRPRPTYEQLIA 413


>gi|187930324|ref|YP_001900811.1| diaminopimelate decarboxylase [Ralstonia pickettii 12J]
 gi|187727214|gb|ACD28379.1| diaminopimelate decarboxylase [Ralstonia pickettii 12J]
          Length = 423

 Score =  241 bits (616), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 60/387 (15%), Positives = 114/387 (29%), Gaps = 26/387 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  N        +     +  A+K  +   +     Q   G    S  E
Sbjct: 31  GTPTYVYSRAALTANYRAYAAACEGRNAHVQYAMKANSNLAVLQVFAQLGAGFDIVSAGE 90

Query: 63  VMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +              ++   K  D    A+          ++ +L++  D A        
Sbjct: 91  LKRVLRAGAPASKVVFSGVGKSADEMRFALEVGVACFNVESIPELHRLNDVAASMGKVAP 150

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           + LRINP V              ++ G    + +            +V G+  H   +  
Sbjct: 151 VSLRINPDVDAKTHPYISTGLKGNKFGVAFDEVLPTYRAAAAMPNLHVVGIDCHIGSQIT 210

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
               +   L    ++  +       +  I +GGG+  T  D    D     +   ++   
Sbjct: 211 EVSPYLDALDKVLDVVTQLDAEGIHLSHIDVGGGLGITYTDETPPDITAFARTLLDRVEQ 270

Query: 228 Q------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280
           +      +  EPG ++V N   L T V  +         + D+++       +       
Sbjct: 271 RGFGDRTVLFEPGRSLVGNAGLLLTRVEYLKPGASKNFCIVDAAMNDLARPAMYEAYHHI 330

Query: 281 IYPNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
           +        P    V G  C +GD  G       V+ GD ++      Y     + +N  
Sbjct: 331 VPVRESQSAPVVYDVVGPVCESGDWLGRDRSLA-VQPGDVLAILSAGAYGFTMSSNYNTR 389

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
           N     + + D    A     + D   
Sbjct: 390 NRAAEVIVDGDKIHLARERECFEDLIR 416


>gi|220933233|ref|YP_002512132.1| diaminopimelate decarboxylase [Thioalkalivibrio sp. HL-EbGR7]
 gi|219994543|gb|ACL71145.1| diaminopimelate decarboxylase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 414

 Score =  241 bits (616), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 60/385 (15%), Positives = 117/385 (30%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  ++  + + L +   G    S+ E
Sbjct: 26  GTPCYVYSRATLERHWRAFDTALGDHPHLICYAVKANSSLAVLNVLARLGSGFDIVSVGE 85

Query: 63  VMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++   K  D    A+          + ++L +    A +L     
Sbjct: 86  LERVLRAGGEASRVVFSGVGKRADEMRRALEVGIRCFNVESEAELARLNGVAGELGVEAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCENK 170
           + +R+NP V              ++ G          +   +     V G+  H   +  
Sbjct: 146 VSIRVNPDVDARTHPYISTGLKENKFGVDIRVAPALYRQAADMAHIRVVGVDCHIGSQLT 205

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224
               F   LK +    +        ++ + LGGG+    +D        + + L E    
Sbjct: 206 GLSPFVDALKRVLELARTLEADGIGLDHLDLGGGLGIRYRDEEPPLPDAYARALFEGLAD 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIYP 283
              +I LEPG AI  N   L T V  +         +VD+++   +   L       +  
Sbjct: 266 TRYEILLEPGRAIAGNAGVLLTRVEYLKHTEHKDFAVVDAAMNDLIRPALYGAWQEIVPV 325

Query: 284 NT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                   T  V G  C  GD  G+      +   D ++      Y     + +N     
Sbjct: 326 APRLGESRTYDVVGPVCETGDFLGKERALV-LAEDDLLAVRSAGAYGFTMSSNYNTRPRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + + +      R  S  +    
Sbjct: 385 AEVMVDGEQVHLVNRRESLEELMAR 409


>gi|153826147|ref|ZP_01978814.1| carboxynorspermidine decarboxylase [Vibrio cholerae MZO-2]
 gi|149740088|gb|EDM54253.1| carboxynorspermidine decarboxylase [Vibrio cholerae MZO-2]
          Length = 387

 Score =  241 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 166/368 (45%), Positives = 245/368 (66%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPY++ID+ KL+ NL+ A ++++ +GVK++LALKCF+ WG+FD +  Y+DGTTSS  +
Sbjct: 16  LKTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSGPF 75

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG+E FGGETHAY+V Y + ++  V+  CD +IFN+ SQL  ++   +     +GLR
Sbjct: 76  EVKLGYETFGGETHAYSVGYSEEDVKEVIDICDKMIFNSQSQLAAYRHLVEGKV-SLGLR 134

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP VSY+   LA+P R FSRLG +     ES   ++NG+MFH NCENK    F  +L  
Sbjct: 135 INPGVSYAGQDLANPARQFSRLGVQADHIDESVFDSINGVMFHMNCENKDVDAFIGLLDA 194

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I + FG ++ +++W+SLGGG+ FT   Y V+     LK F+E+++VQ+YLEPGEAI+T T
Sbjct: 195 ISERFGRYLDKLDWVSLGGGVFFTWPGYDVEKLGAALKAFAERHAVQLYLEPGEAIITKT 254

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299
           T L  TV+DI EN     IVDS+ EAH  D L+Y+E A++    + G +  ++   SCLA
Sbjct: 255 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASDNGQHEYVIGSCSCLA 314

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F    F++P+++G ++   D AGY + + NWFNG+ MP++  +  +G I+ I +F Y
Sbjct: 315 GDQFCVAKFDEPLQVGQKLHILDSAGYTMVKLNWFNGLKMPSVYCERKNGQIQKINQFGY 374

Query: 360 NDYYNNLS 367
            D+   LS
Sbjct: 375 EDFKRTLS 382


>gi|241762096|ref|ZP_04760179.1| diaminopimelate decarboxylase [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|241373346|gb|EER62946.1| diaminopimelate decarboxylase [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
          Length = 421

 Score =  241 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 69/388 (17%), Positives = 132/388 (34%), Gaps = 26/388 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG---VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP Y+     L             AG     +  A+K   +  +  +  +   G    S
Sbjct: 26  GTPCYVYSHSYLTERARRFTKALDGAGKGKALVAFAVKANPSQAILASFAKEGLGADVVS 85

Query: 60  LYEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
             E+    H     E   ++   K  +    A+          +VS++    + A  L K
Sbjct: 86  AGEIRRAVHAGIPPERIVFSGVGKTAEEMRYALEIGIGQFNIESVSEIEMLAEVAASLGK 145

Query: 117 K--IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNC 167
           K  + LRINP V           +  ++ G   +D + +  K        + G+  H   
Sbjct: 146 KAAVALRINPDVDPHTHAKIATGKADTKFGIAAEDALSAYEKLASYPSLKIQGIASHIGS 205

Query: 168 ENK---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC-----QRLK 219
           +      F   +  +  I          IE   LGGG+    KD   +        + +K
Sbjct: 206 QITDLAPFEAAAERIYEIITALEKAGHAIETADLGGGLGVRYKDDQPEPPSIEAYGEMIK 265

Query: 220 EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES 278
             ++ ++ ++  EPG +++ N   L + V+ + E+     ++ D+++   V   L     
Sbjct: 266 RVTKGWNCRLIFEPGRSLIANAGILLSKVIRVKESKTARFVILDAAMNDLVRPTLYDAYH 325

Query: 279 AT--IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
               + P+   Y A + G  C  GDIF        VK  D ++      Y     + +N 
Sbjct: 326 EIKAVTPSAQAYQADIVGPVCETGDIFARNRSIPAVKPDDLVAIMSAGAYGATMASAYNS 385

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +    + + + +    +  S  D   
Sbjct: 386 RPLVAEVMVSGNKSALIRKRQSVEDLMR 413


>gi|153830885|ref|ZP_01983552.1| carboxynorspermidine decarboxylase [Vibrio cholerae 623-39]
 gi|148873636|gb|EDL71771.1| carboxynorspermidine decarboxylase [Vibrio cholerae 623-39]
          Length = 387

 Score =  241 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 166/368 (45%), Positives = 245/368 (66%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TPY++ID+ KL+ NL+ A Y+++ +GVK++LALKCF+ WG+FD +  Y+DGTTSS  +
Sbjct: 16  LRTPYFMIDEAKLIANLEIAKYLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSGPF 75

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG+E FGGETHAY+V Y + ++  V+  CD +IFN+ SQL  ++   +     +GLR
Sbjct: 76  EVKLGYETFGGETHAYSVGYSEEDVKEVIDICDKMIFNSQSQLAAYRHLVEGKAS-LGLR 134

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP VSY+   LA+P R FSRLG +     ES   ++NG+MFH NCENK    F  +L  
Sbjct: 135 INPGVSYAGQDLANPARQFSRLGVQADHIDESVFDSINGVMFHMNCENKDVDAFIGLLDA 194

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I + FG ++ +++W+SLGGG+ FT   Y V+     LK F+E+++VQ+YLEPGEAI+T T
Sbjct: 195 ISERFGRYLDKLDWVSLGGGVFFTWPGYDVEKLGAALKAFAERHAVQLYLEPGEAIITKT 254

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299
           T L  TV+DI EN     IVDS+ EAH  D L+Y+E A++    + G +  ++   SCLA
Sbjct: 255 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASDKGQHEYVIGSCSCLA 314

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F    F++P+++G ++   D AGY + + NWFNG+ MP++  +  +G I+ I +F Y
Sbjct: 315 GDQFCVAKFDEPLQVGQKLHILDSAGYTMVKLNWFNGLKMPSVYCERKNGQIQKINQFGY 374

Query: 360 NDYYNNLS 367
            D+   LS
Sbjct: 375 EDFKRTLS 382


>gi|85705851|ref|ZP_01036947.1| diaminopimelate decarboxylase [Roseovarius sp. 217]
 gi|85669439|gb|EAQ24304.1| diaminopimelate decarboxylase [Roseovarius sp. 217]
          Length = 421

 Score =  241 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 56/390 (14%), Positives = 120/390 (30%), Gaps = 26/390 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +              +  A+K  +   +  TL +   G    S  
Sbjct: 25  VGTPFYCYSTATLERHFRLFDEALTGMDHLVCYAMKAASNQAILKTLARLGAGMDVVSGG 84

Query: 62  EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E          GE   ++     ++    A++         +  ++      A +L    
Sbjct: 85  EYARAKAAGVPGERIVFSGVGKTREEMRLALMGGIRQFNVESEPEMGVLSAVAVELGLRA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
            I +R+NP V           +  ++ G       E   +        V G+  H   + 
Sbjct: 145 PITIRVNPDVDAKTHAKIATGKSENKFGIPIARAREVYAQAAALPGLEVIGIDVHIGSQL 204

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221
                F    + +    +        I  + LGGG+               ++   ++E 
Sbjct: 205 TDLAPFRLAYEKVAELTQVLREDGHDIRRLDLGGGLGIPYTRSNEAPPLPTEYGALIREV 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280
                 +I +EPG  I  N   L + V+ +     ++ +I+D+++   +   +       
Sbjct: 265 LGHLGCEIEIEPGRLIAGNAGILVSRVIYLKSGEGRDFLILDAAMNDLIRPAMYDAHHDI 324

Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +               V G  C +GD F +     P+  GD ++F     Y     + +N
Sbjct: 325 VPLVEPAPGVEQQPYDVVGPVCESGDTFAKGRMLPPLAEGDLVAFRSAGAYGAVMSSEYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              +    + +           ++++  N 
Sbjct: 385 TRPLVPEVLVHGRDFAVIRGRPTFDEMINR 414


>gi|153873428|ref|ZP_02002015.1| diaminopimelate decarboxylase [Beggiatoa sp. PS]
 gi|152070106|gb|EDN67985.1| diaminopimelate decarboxylase [Beggiatoa sp. PS]
          Length = 414

 Score =  241 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 59/385 (15%), Positives = 112/385 (29%), Gaps = 24/385 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +        KN    +  A+K  +   +   L +   G    S  E
Sbjct: 26  GTPCYVYSRATLERHWHAFDNALKNHRHLICYAVKANSNLTVLSVLARLGSGFDIVSGGE 85

Query: 63  VMLG-HEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +              ++   K       A+          + ++L +    A        
Sbjct: 86  LERVLRAGGDPNKIVFSGVGKTVIEMRRALEVGIRCFNVESEAELLRLNQVAGDMGKMAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNC--- 167
           + LR+NP V              ++ G      I+            + G+  H      
Sbjct: 146 VSLRVNPDVDAKTHPYISTGLKENKFGIDINSAIDVYKKAKALPHLQIIGIDCHIGSQLT 205

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK---EFSEK 224
           +  SF+     +  +          ++ I LGGG+          +    ++   +    
Sbjct: 206 QTTSFVDALQRVIVLVNTLRDKNIHLQHIDLGGGLGVRYHTETPPEPENYVQALTQVLGD 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQES----A 279
              +I LEPG AI  N   L T V  +     K+  IVD+++   +   L          
Sbjct: 266 TPYEIILEPGRAIAANAGVLLTKVEYLKHTADKHFAIVDAAMNDLLRPALYTAWQDILPV 325

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
               N       + G  C  GD  G+      +   D ++      Y     + +N    
Sbjct: 326 QPRKNETEQNYDIVGPICETGDFLGKNRALA-LHESDVLAVRTSGAYGFTMSSNYNTRPR 384

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
               + + +      R  + +D   
Sbjct: 385 VAELMVDGEQVAVVRRRETIDDILA 409


>gi|319789610|ref|YP_004151243.1| diaminopimelate decarboxylase [Thermovibrio ammonificans HB-1]
 gi|317114112|gb|ADU96602.1| diaminopimelate decarboxylase [Thermovibrio ammonificans HB-1]
          Length = 419

 Score =  241 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 61/385 (15%), Positives = 111/385 (28%), Gaps = 23/385 (5%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP Y+          +               A+K  +   +   L +   G  + S  E+
Sbjct: 33  TPAYVYSANAFRWWFNEFNSAFSQVEHTTCFAVKANSNVWVLKLLAELGAGADTVSAGEI 92

Query: 64  MLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKKI 118
                     +   +    K  +        D   I   + S+L       +KL     I
Sbjct: 93  HRALTAGISPKKIVFAGVGKRPDEIEFALERDILMINVESESELETVNRVGEKLGKKAPI 152

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENKS 171
            LR+NP V              ++ G   +  +E        +  N  G+ FH   +   
Sbjct: 153 ALRVNPEVDPKTHPYISTGLHEAKFGVDYERAVELYKKAKEMKWVNPVGIHFHIGSQITD 212

Query: 172 FLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK 224
              F    + + +          ++E    GGG+           P ++  ++L    ++
Sbjct: 213 TSAFGEAAEKVAELVKELHSLGIEVELFDAGGGLGVNYNPQEPPVPSEELAKQLIPAVKE 272

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP 283
              ++ LEPG  I  N   L T +L I         + D+ +       L       +  
Sbjct: 273 LGCKLILEPGRRISANAGVLLTKLLYIKRRPNKTFYIVDAGMNDLARPALYGAYHHIVPV 332

Query: 284 NTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                   T  V G  C  GDI  +         GD ++      Y     + +N    P
Sbjct: 333 VNKGRKTETVDVVGPICETGDILAKGRELPECSEGDILAVLSAGAYGFTMASNYNSRPRP 392

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              +     T    +  + +D    
Sbjct: 393 PEILVEGSSTRVIRQRETISDLLAR 417


>gi|327484235|gb|AEA78642.1| Carboxynorspermidine decarboxylase, putative [Vibrio cholerae
           LMA3894-4]
          Length = 377

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 166/368 (45%), Positives = 245/368 (66%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPY++ID+ KL+ NL+ A ++++ +GVK++LALKCF+ WG+FD +  Y+DGTTSS  +
Sbjct: 6   LKTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG+E FGGETHAY+V Y + ++  V+  CD +IFN+ SQL  ++   +     +GLR
Sbjct: 66  EVKLGYETFGGETHAYSVGYSEEDVKEVIDICDKMIFNSQSQLAAYRHLVEGKV-SLGLR 124

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP VSY+   LA+P R FSRLG +     ES   ++NG+MFH NCENK    F  +L  
Sbjct: 125 INPGVSYAGQDLANPARQFSRLGVQADHIDESVFDSINGVMFHMNCENKDVDAFIGLLDA 184

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I + FG ++ +++W+SLGGG+ FT   Y V+     LK F+E+++VQ+YLEPGEAI+T T
Sbjct: 185 ISERFGRYLDKLDWVSLGGGVFFTWPGYDVEKLGAALKAFAERHAVQLYLEPGEAIITKT 244

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299
           T L  TV+DI EN     IVDS+ EAH  D L+Y+E A++    + G +  ++   SCLA
Sbjct: 245 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASDNGQHEYVIGSCSCLA 304

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F    F++P+++G ++   D AGY + + NWFNG+ MP++  +  +G I+ I +F Y
Sbjct: 305 GDQFCVAKFDEPLQVGQKLHILDSAGYTMVKLNWFNGLKMPSVYCERKNGQIQKINQFGY 364

Query: 360 NDYYNNLS 367
            D+   LS
Sbjct: 365 EDFKRTLS 372


>gi|332969020|gb|EGK08060.1| diaminopimelate decarboxylase [Kingella kingae ATCC 23330]
          Length = 408

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 66/384 (17%), Positives = 125/384 (32%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L           +++   +  A+K  +   +     +   G  + S  E
Sbjct: 17  GTPLYVYSENALTQAYRAYEQAFESSKSLICYAIKANSNLSIIQHFAKLGSGFDTVSGGE 76

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--K 117
           +              ++   K         N         ++ +L++  + A +L K   
Sbjct: 77  IARVLAAGGAANKIIFSGVGKSVAEMEFALNAGIKCFNVESLPELDRLNEVAARLGKIAP 136

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LRINP V              ++ G    D   +          NV G+  H   +  
Sbjct: 137 VSLRINPDVDAKTHPYISTGLKENKFGIAMADAERAYQHASSLQHLNVVGIDCHIGSQLT 196

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                    + +     +       ++ I LGGG+    KD     + ++ Q +++    
Sbjct: 197 DLSPLVEACERMLLLVDKLAAQGIVLQHIDLGGGVGIVYKDEQTPDLAEYAQAVQKLLAG 256

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + + LEPG ++V N  TL T V  I +   KN VIVD+++   +   L          
Sbjct: 257 RDLGLVLEPGRSLVGNAGTLLTRVEFIKQGEEKNFVIVDAAMNDLMRPALYQAYHHIENA 316

Query: 284 NTGPYTAM---VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
           +     AM   V G  C  GD   +       + GD +       Y  +  + +N     
Sbjct: 317 SDKKQPAMFADVVGPICETGDFLAQNREIV-AEQGDVLLVRSAGAYGASMASNYNTRCRA 375

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              +   D      +  + +D   
Sbjct: 376 VEVLVQGDNVRVIRQRETLDDLLR 399


>gi|15641630|ref|NP_231262.1| carboxynorspermidine decarboxylase [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121730008|ref|ZP_01682422.1| carboxynorspermidine decarboxylase [Vibrio cholerae V52]
 gi|147673110|ref|YP_001217174.1| carboxynorspermidine decarboxylase [Vibrio cholerae O395]
 gi|153214667|ref|ZP_01949527.1| carboxynorspermidine decarboxylase [Vibrio cholerae 1587]
 gi|153819366|ref|ZP_01972033.1| carboxynorspermidine decarboxylase [Vibrio cholerae NCTC 8457]
 gi|153822200|ref|ZP_01974867.1| carboxynorspermidine decarboxylase [Vibrio cholerae B33]
 gi|227081776|ref|YP_002810327.1| carboxynorspermidine decarboxylase [Vibrio cholerae M66-2]
 gi|254285432|ref|ZP_04960397.1| carboxynorspermidine decarboxylase [Vibrio cholerae AM-19226]
 gi|254848743|ref|ZP_05238093.1| carboxynorspermidine decarboxylase [Vibrio cholerae MO10]
 gi|298498294|ref|ZP_07008101.1| carboxynorspermidine decarboxylase [Vibrio cholerae MAK 757]
 gi|9656136|gb|AAF94776.1| carboxynorspermidine decarboxylase [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121628242|gb|EAX60759.1| carboxynorspermidine decarboxylase [Vibrio cholerae V52]
 gi|124115189|gb|EAY34009.1| carboxynorspermidine decarboxylase [Vibrio cholerae 1587]
 gi|126510080|gb|EAZ72674.1| carboxynorspermidine decarboxylase [Vibrio cholerae NCTC 8457]
 gi|126520268|gb|EAZ77491.1| carboxynorspermidine decarboxylase [Vibrio cholerae B33]
 gi|146314993|gb|ABQ19532.1| carboxynorspermidine decarboxylase [Vibrio cholerae O395]
 gi|150424704|gb|EDN16640.1| carboxynorspermidine decarboxylase [Vibrio cholerae AM-19226]
 gi|227009664|gb|ACP05876.1| carboxynorspermidine decarboxylase [Vibrio cholerae M66-2]
 gi|227013532|gb|ACP09742.1| carboxynorspermidine decarboxylase [Vibrio cholerae O395]
 gi|254844448|gb|EET22862.1| carboxynorspermidine decarboxylase [Vibrio cholerae MO10]
 gi|297542627|gb|EFH78677.1| carboxynorspermidine decarboxylase [Vibrio cholerae MAK 757]
          Length = 387

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 165/368 (44%), Positives = 245/368 (66%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TPY++ID+ KL+ NL+ A ++++ +GVK++LALKCF+ WG+FD +  Y+DGTTSS  +
Sbjct: 16  LRTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSGPF 75

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG+E FGGETHAY+V Y + ++  V+  CD +IFN+ SQL  ++   +     +GLR
Sbjct: 76  EVKLGYETFGGETHAYSVGYSEEDVKEVIDICDKMIFNSQSQLAAYRHLVEGKAS-LGLR 134

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP VSY+   LA+P R FSRLG +     ES   ++NG+MFH NCENK    F  +L  
Sbjct: 135 INPGVSYAGQDLANPARQFSRLGVQADHIDESVFDSINGVMFHMNCENKDVDAFIGLLDA 194

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I + FG ++ +++W+SLGGG+ FT   Y V+     LK F+E+++VQ+YLEPGEAI+T T
Sbjct: 195 ISERFGRYLDKLDWVSLGGGVFFTWPGYDVEKLGAALKAFAERHAVQLYLEPGEAIITKT 254

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299
           T L  TV+DI EN     IVDS+ EAH  D L+Y+E A++    + G +  ++   SCLA
Sbjct: 255 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASDKGQHEYVIGSCSCLA 314

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F    F++P+++G ++   D AGY + + NWFNG+ MP++  +  +G I+ I +F Y
Sbjct: 315 GDQFCVAKFDEPLQVGQKLHILDSAGYTMVKLNWFNGLKMPSVYCERKNGQIQKINQFGY 374

Query: 360 NDYYNNLS 367
            D+   LS
Sbjct: 375 EDFKRTLS 382


>gi|138895872|ref|YP_001126325.1| diaminopimelate decarboxylase [Geobacillus thermodenitrificans
           NG80-2]
 gi|196248761|ref|ZP_03147461.1| diaminopimelate decarboxylase [Geobacillus sp. G11MC16]
 gi|134267385|gb|ABO67580.1| Diaminopimelate decarboxylase [Geobacillus thermodenitrificans
           NG80-2]
 gi|196211637|gb|EDY06396.1| diaminopimelate decarboxylase [Geobacillus sp. G11MC16]
          Length = 439

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 62/401 (15%), Positives = 121/401 (30%), Gaps = 37/401 (9%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSS 58
           M  TP Y+ D   +              GV+  +  A K F++  M     +        
Sbjct: 28  MYGTPLYIYDVALIRARARAFKEAFHLQGVRAQVAYASKAFSSIAMVQLAAEEGLSLDVV 87

Query: 59  SLYEVMLG-HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           S  E+       F  E   ++     +D    A+      I+ +   +L   +  A    
Sbjct: 88  SGGELYTAIAAGFPSERIHFHGNNKSRDELAMALEHGIGCIVADNFYELELIEQLAAASG 147

Query: 116 K--KIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFH 164
           +   + LR+ P V           +  S+ G         E  +  + S    + G+  H
Sbjct: 148 RVVPVLLRVTPGVEAHTHDYILTGQEDSKFGFDLNNGQADEAFRRVMASSAFQLLGVHCH 207

Query: 165 NNCEN----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
              +        L    +   + +    +      I+LGGG      +           +
Sbjct: 208 IGSQIFETTGFVLAAQKVFTKMAEWNKAYGFIPSVINLGGGFGIRYTEEDDPIPVSAYVD 267

Query: 221 FSEKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEA 267
              +              +I++EPG ++V +  T   T+    +         VD  +  
Sbjct: 268 CIVEEVKKQAKACQLPLPEIWIEPGRSLVGDAGTTIYTIGSRKDVPNIRTYLAVDGGMSD 327

Query: 268 HVPDYLLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323
           ++   L   +   +  N        T  + G+ C +GD+          K GD ++    
Sbjct: 328 NIRPALYGAKYEAVLANRVLGERTETVSIAGKCCESGDMLIWDLALPETKPGDYLAVFCT 387

Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             Y  +  N +N +  P I           ++  +Y D   
Sbjct: 388 GAYGYSMANNYNRLPRPAIVFVENGDAQLVVKRETYEDLIQ 428


>gi|262165800|ref|ZP_06033537.1| carboxynorspermidine decarboxylase putative [Vibrio mimicus VM223]
 gi|262025516|gb|EEY44184.1| carboxynorspermidine decarboxylase putative [Vibrio mimicus VM223]
          Length = 377

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 165/368 (44%), Positives = 244/368 (66%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPY++ID+ KL+ NL+ A ++++ +GVK++LALKCF+ WG+FD +  Y+DGTTSS  +
Sbjct: 6   LKTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG+E FGGETHAY+V Y + ++  V+  CD +IFN+ SQL  ++   +     +GLR
Sbjct: 66  EVKLGYETFGGETHAYSVGYSEDDVKEVVDICDKMIFNSQSQLAAYRHLVEGKA-SLGLR 124

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP VSY+   LA+P R FSRLG +     E+  + ++G+MFH NCENK    F ++L  
Sbjct: 125 INPGVSYAGQDLANPARKFSRLGVQADHIDENVFETIDGVMFHMNCENKDVDAFISLLDA 184

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I + FG ++ +++W+SLGGG+ FT   Y V      LK FSE++ VQ+YLEPGEA++T T
Sbjct: 185 ISERFGRYLDKLDWVSLGGGVFFTWPGYDVDKLGAALKAFSERHGVQLYLEPGEAVITKT 244

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299
           T L  TV+DI EN     IVDS+ EAH  D L+Y+E A++    + G +  ++   SCLA
Sbjct: 245 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASDNGQHEYVIGSCSCLA 304

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F    F++P+K+G ++   D AGY + + NWFNG+ MP++  +  +G I+ I +F Y
Sbjct: 305 GDQFCVAKFDEPLKVGQKLHILDSAGYTMVKLNWFNGLKMPSVYCERQNGEIQKINQFGY 364

Query: 360 NDYYNNLS 367
            D+   LS
Sbjct: 365 EDFKRTLS 372


>gi|322421972|ref|YP_004201195.1| diaminopimelate decarboxylase [Geobacter sp. M18]
 gi|320128359|gb|ADW15919.1| diaminopimelate decarboxylase [Geobacter sp. M18]
          Length = 417

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 61/384 (15%), Positives = 120/384 (31%), Gaps = 22/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+  K  L  +          A   +  ++K  +   +  T      G    S  E
Sbjct: 26  GSPVYIYSKATLERHFKAMDDAFAGAPHTICYSVKANSNLAVLKTFINLGSGVDIVSGGE 85

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
           +          +   Y+   K  +  A             +  +L++  + A +L+KK G
Sbjct: 86  LYRALAAGVDPKKVVYSGVGKRDDEIAYALETGILLFNVESEQELDRINEVAGRLNKKAG 145

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           +  R+NP V              ++ G   +  +    +        + G+  H   +  
Sbjct: 146 IAIRVNPDVDPQTHPYITTGLKKAKFGINIERALGQYQRAKELSNLEILGIDCHIGSQLT 205

Query: 171 SFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEK 224
               F   +K +++          +++++ LGGG+     D            + E ++ 
Sbjct: 206 KVSPFVDAIKKLKRLLKGVREMGIEVKYLDLGGGLGIQYNDEAPPLPADYGSSILEETKD 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES---AT 280
             + +  EPG  +V N   L  T L   +   KN VIVD+ +       L          
Sbjct: 266 LGLHLLFEPGRNLVGNAGILVGTCLYTKKGEEKNFVIVDAGMNDLARPALYGSFHGVRPV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                G     + G  C +GD   +       + GD+I+F     Y     + +N     
Sbjct: 326 FRNQDGVIEGDIVGPICESGDFLVKDREIPNFQQGDQIAFMSAGAYGFTMSSNYNSRPRV 385

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + +           +  D   
Sbjct: 386 AEVMVDGVKFEVVRERETLEDLVK 409


>gi|229515019|ref|ZP_04404479.1| hypothetical protein VCB_002672 [Vibrio cholerae TMA 21]
 gi|229347724|gb|EEO12683.1| hypothetical protein VCB_002672 [Vibrio cholerae TMA 21]
          Length = 377

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 165/368 (44%), Positives = 245/368 (66%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TPY++ID+ KL+ NL+ A ++++ +GVK++LALKCF+ WG+FD +  Y+DGTTSS  +
Sbjct: 6   LRTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG+E FGGETHAY+V Y + ++  V+  CD +IFN+ SQL  ++   +     +GLR
Sbjct: 66  EVKLGYETFGGETHAYSVGYSEEDVKEVIDICDKVIFNSQSQLAAYRHLVEGKAS-LGLR 124

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP VSY+   LA+P R FSRLG +     ES   ++NG+MFH NCENK    F  +L  
Sbjct: 125 INPGVSYAGQDLANPARQFSRLGVQADHIDESVFDSINGVMFHMNCENKDVDAFIGLLDA 184

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I + FG ++ +++W+SLGGG+ FT   Y V+     LK F+E+++VQ+YLEPGEAI+T T
Sbjct: 185 ISERFGRYLDKLDWVSLGGGVFFTWPGYDVEKLGAALKAFAERHAVQLYLEPGEAIITKT 244

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299
           T L  TV+DI EN     IVDS+ EAH  D L+Y+E A++    + G +  ++   SCLA
Sbjct: 245 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASDKGQHEYVIGSCSCLA 304

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F    F++P+++G ++   D AGY + + NWFNG+ MP++  +  +G I+ I +F Y
Sbjct: 305 GDQFCVAKFDEPLQVGQKLHILDSAGYTMVKLNWFNGLKMPSVYCERKNGQIQKINQFGY 364

Query: 360 NDYYNNLS 367
            D+   LS
Sbjct: 365 EDFKRTLS 372


>gi|157960206|ref|YP_001500240.1| diaminopimelate decarboxylase [Shewanella pealeana ATCC 700345]
 gi|157845206|gb|ABV85705.1| diaminopimelate decarboxylase [Shewanella pealeana ATCC 700345]
          Length = 414

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 66/382 (17%), Positives = 115/382 (30%), Gaps = 23/382 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +   + + L +   G    S  E
Sbjct: 26  GTPLYIYSRATLERHWRAFDNAVSEHPHLICYAVKANSNIAVLNVLARLGSGFDIVSGGE 85

Query: 63  V-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--K 117
           +  +           ++   K      +  N         + ++L +    A +L K   
Sbjct: 86  LSRVIEAGGDPTKVVFSGVGKTVSEMEMALNLGIYCFNVESAAELEQLNLVALRLGKVAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNC--- 167
           + LRINP V              ++ G   ++         E     V G+  H      
Sbjct: 146 VSLRINPDVDAGTHPYISTGLKENKFGIAMEEAEAIFARANELPGLAVKGVDCHIGSQLT 205

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
           E K FL     +  +         +I+   +GGG+  T  D        +   L E    
Sbjct: 206 EIKPFLDAMDRMLALIDRLAEQGIEIKHFDVGGGLGVTYDDEQPPQPDVYAAALLERLGD 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQES---AT 280
             +++  EPG AI  N     T VL + EN       VD ++   +   L          
Sbjct: 266 RDLKLIFEPGRAIAANAGIFVTQVLYLKENSDKRFALVDGAMNDLIRPSLYSAWQKIVPV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
           I      ++  V G  C  GD  G+      V+ GD ++      Y     + +N     
Sbjct: 326 IERAGESHSYDVVGPVCETGDFLGKDRQL-NVQEGDYLAVRSSGAYGFTMASNYNSRPRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDY 362
              + + D              
Sbjct: 385 AELMVDGDKAYVIREREKVAQL 406


>gi|304388543|ref|ZP_07370644.1| diaminopimelate decarboxylase [Neisseria meningitidis ATCC 13091]
 gi|304337463|gb|EFM03631.1| diaminopimelate decarboxylase [Neisseria meningitidis ATCC 13091]
          Length = 406

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 66/385 (17%), Positives = 127/385 (32%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L    +            +  A+K      +         G    S  E
Sbjct: 18  GTPLYVYSQSALTEAFEHYQTAFAALNPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77

Query: 63  VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G   +T    V   + EI+ A+ +        ++ ++++ +  A +L     
Sbjct: 78  LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAP 137

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LRINP V              ++ G    D +E+           + G+  H   +  
Sbjct: 138 VSLRINPDVDAKTHPYISTGLKANKFGIAYADALEAYHYAAQQPNLKIIGIDCHIGSQLT 197

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                    + I             +E + LGGG+    +D     +  + Q +++    
Sbjct: 198 DLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDENVPDLGAYAQAVQKLIGT 257

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++ LEPG ++V N  +L T V  +     KN V+VD+++   +   L          
Sbjct: 258 RRLKLILEPGRSLVGNAGSLLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317

Query: 284 NTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
            T      TA + G  C  GD  G+       + GD +       Y  +  + +N  N  
Sbjct: 318 ETKDIATLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNARNRA 376

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + + +      R  +      N
Sbjct: 377 AEVLVDGNEYRLIRRRETLEQQMAN 401


>gi|283953863|ref|ZP_06371393.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp.
           jejuni 414]
 gi|283794642|gb|EFC33381.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp.
           jejuni 414]
          Length = 382

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 140/376 (37%), Positives = 212/376 (56%), Gaps = 18/376 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TP Y++++ KL  N +    + + +G K+LLALK FA  G    + +Y+ G T S L+
Sbjct: 6   IQTPAYILEEDKLRKNCELLAMVGQKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSGLW 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E     E    E H Y+ A+K+ EID + S    I+FN+++Q +KF+  A+     IGLR
Sbjct: 66  EAKFAKEYMDKEIHTYSPAFKEDEIDEIASLSHHIVFNSLAQFHKFQ--AKTQKNSIGLR 123

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
            N   S +   L +P   +SRLG + KD    ++  + GL FH  CE +S     A+LK 
Sbjct: 124 CNIEFSIAPKELYNPCGRYSRLGIRAKDLENLDLSGIEGLHFHALCE-ESADALEAVLKA 182

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            E++FG +I Q++W++ GGG H T K Y V+      K FS+KY VQ+YLEPGEA+   T
Sbjct: 183 FEEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLITLCKNFSDKYGVQVYLEPGEAVGWQT 242

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP---------------NTG 286
             L  +V+DI EN K + I+D+S EAH+PD ++   ++ +                    
Sbjct: 243 GNLVASVIDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKKSELREN 302

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
            +  ++ G +CLAGDI GE+ F+K ++IGD+I F D   Y I +   FNGI +P + + +
Sbjct: 303 EFAYLLTGNTCLAGDIMGEYAFDKKLQIGDKIVFLDQIHYTIVKNTTFNGIRLPNLMLLD 362

Query: 347 VDGTIKAIREFSYNDY 362
               ++ IREFSY DY
Sbjct: 363 HKNELQMIREFSYKDY 378


>gi|261393306|emb|CAX50938.1| diaminopimelate decarboxylase (DAP decarboxylase) [Neisseria
           meningitidis 8013]
          Length = 406

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 67/385 (17%), Positives = 129/385 (33%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L    +            +  A+K      +         G    S  E
Sbjct: 18  GTPLYVYSQSALTEAFEHYQTAFAALNPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77

Query: 63  VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G   +T    V   + EI+ A+ +        ++ ++++ +  A +L     
Sbjct: 78  LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAS 137

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D +E+  +        + G+  H   +  
Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRRAAQQPNLKIIGIDCHIGSQLT 197

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
                    + I             +E + LGGG+    +D  V D   + Q +++    
Sbjct: 198 DLSPLIEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDEDVPDLGAYAQAVQKLMGT 257

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++ LEPG ++V N  +L T V  +     KN V+VD+++   +   L          
Sbjct: 258 RRLKLILEPGRSLVGNAGSLLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317

Query: 284 NTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
            T      TA + G  C  GD  G+       + GD +       Y  +  + +N  N  
Sbjct: 318 ETKDIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNARNRA 376

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + + +      R  +      N
Sbjct: 377 AEVLVDGNEYRLIRRRETLEQQMAN 401


>gi|15677805|ref|NP_274969.1| diaminopimelate decarboxylase [Neisseria meningitidis MC58]
 gi|13124076|sp|Q9JXM2|DCDA_NEIMB RecName: Full=Diaminopimelate decarboxylase; Short=DAP
           decarboxylase
 gi|7227237|gb|AAF42304.1| diaminopimelate decarboxylase [Neisseria meningitidis MC58]
 gi|316985611|gb|EFV64558.1| diaminopimelate decarboxylase [Neisseria meningitidis H44/76]
 gi|325139296|gb|EGC61837.1| diaminopimelate decarboxylase [Neisseria meningitidis CU385]
 gi|325201024|gb|ADY96479.1| diaminopimelate decarboxylase [Neisseria meningitidis H44/76]
          Length = 414

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 66/385 (17%), Positives = 127/385 (32%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L    +            +  A+K      +         G    S  E
Sbjct: 18  GTPLYVYSQSALTEAFEHYQTAFAALNPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77

Query: 63  VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G   +T    V   + EI+ A+ +        ++ ++++ +  A +L     
Sbjct: 78  LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAP 137

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LRINP V              ++ G    D +E+           + G+  H   +  
Sbjct: 138 VSLRINPDVDAKTHPYISTGLKANKFGIAYADALEAYHYAAQQPNLKIIGIDCHIGSQLT 197

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                    + I             +E + LGGG+    +D     +  + Q +++    
Sbjct: 198 DLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDENVPDLGAYAQAVQKLIGT 257

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++ LEPG ++V N  +L T V  +     KN V+VD+++   +   L          
Sbjct: 258 RRLKLILEPGRSLVGNAGSLLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317

Query: 284 NTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
            T      TA + G  C  GD  G+       + GD +       Y  +  + +N  N  
Sbjct: 318 ETKDIATLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNARNRA 376

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + + +      R  +      N
Sbjct: 377 AEVLVDGNEYRLIRRRETLEQQMAN 401


>gi|254475385|ref|ZP_05088771.1| diaminopimelate decarboxylase [Ruegeria sp. R11]
 gi|214029628|gb|EEB70463.1| diaminopimelate decarboxylase [Ruegeria sp. R11]
          Length = 421

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 61/390 (15%), Positives = 123/390 (31%), Gaps = 26/390 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+     LL +              +  A+K  +   +  TL Q   G    S  
Sbjct: 25  VGTPFYVYSTATLLRHFQLFDDALAGMDHLVCYAMKAASNQAILKTLAQAGAGMDVVSQG 84

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E +        G+   ++   K  E    A+          +  ++      A  L    
Sbjct: 85  EYLRAKAAGVPGDKIVFSGVGKTAEEIRTALSGGIRQFNVESEPEMEVINAVALDLGVVA 144

Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            +  R+NP V           +  ++ G       E           +V G+  H   + 
Sbjct: 145 PITVRVNPDVDAKTHAKIATGKSENKFGIPIAKAREVYAHAATLKGLDVIGIDVHIGSQL 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221
                F    + + +           I  + LGGG+               ++ Q +K+ 
Sbjct: 205 TELEPFRLAYQKVAELTETLRADGHDIRRLDLGGGLGIPYTRSNEAPPLPVEYGQLIKDT 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280
               +V+I +EPG  I  N   + + V+ + E   ++ +I+D ++   +   +       
Sbjct: 265 LGHLNVEIEIEPGRLIAGNAGLMVSKVIYVKEGEGRDFLILDGAMNDLIRPAMYEAHHDI 324

Query: 281 IYPNT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +          P    + G  C  GD F +     P+   D ++F     Y     + +N
Sbjct: 325 VPVVEPEPGLEPRPYDIVGPVCETGDTFAKARLMPPLSANDLVAFRSAGAYGAVMASEYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              +    + + D      R   +++  N 
Sbjct: 385 SRPLIPEVLVHGDQFAVIRRRPDFDEMINR 414


>gi|54309400|ref|YP_130420.1| putative carboxynorspermidine decarboxylase [Photobacterium
           profundum SS9]
 gi|46913836|emb|CAG20618.1| putative carboxynorspermidine decarboxylase [Photobacterium
           profundum SS9]
          Length = 377

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 168/368 (45%), Positives = 240/368 (65%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPY++ID+ KL+ NL+ A  +++ +GVKL+LALKCF+ WG+FD +  Y+DGTTSS  Y
Sbjct: 6   LKTPYFMIDESKLVANLEKAKLLKELSGVKLVLALKCFSTWGVFDLIKPYLDGTTSSGPY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG+E FGGETHAY+V Y + ++  V   CD +IFN+ +QL  ++   +     +GLR
Sbjct: 66  EVKLGYETFGGETHAYSVGYSEDDVKDVAEICDKMIFNSQNQLAAYRHLVEGKA-SLGLR 124

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP VSY+   LA+P R +SRLG +      +   N++G+MFH NCENK    F  +L +
Sbjct: 125 LNPGVSYAGQDLANPARQYSRLGVQWDHIDTAVFDNLDGVMFHMNCENKDEDAFIRLLND 184

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I  +FG  + +++W+SLGGG+ FT   Y ++     LK FSEK+ VQ+YLEPGEAI+T T
Sbjct: 185 ISDKFGKHLDKLDWVSLGGGVFFTWPGYNIEKLAAALKTFSEKHGVQLYLEPGEAIITKT 244

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299
             L  TV+DI EN     IVDS+ EAH  D L+Y E A+I      G +  ++   SCLA
Sbjct: 245 ADLVVTVVDIVENEIKTAIVDSATEAHRLDTLIYDEPASIAEASEQGAHQYVIGSCSCLA 304

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F    F++P+KIG R+   D AGY + + NWFNG+ MP+I  +  +G I+ + EF Y
Sbjct: 305 GDQFCVTQFDEPLKIGQRLHITDSAGYTMVKLNWFNGLKMPSIYCERANGEIEKLNEFGY 364

Query: 360 NDYYNNLS 367
           +D+  +LS
Sbjct: 365 DDFKRSLS 372


>gi|152993635|ref|YP_001359356.1| diaminopimelate decarboxylase [Sulfurovum sp. NBC37-1]
 gi|151425496|dbj|BAF72999.1| diaminopimelate decarboxylase [Sulfurovum sp. NBC37-1]
          Length = 409

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 70/383 (18%), Positives = 126/383 (32%), Gaps = 21/383 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D   +    +            +  A+K  +   +   L +   G    S+ E
Sbjct: 13  GTPLYMYDFDYMERRYNDLKEAFAGKKSLINYAVKANSNLSVIAHLAKLGTGADCVSIGE 72

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKAQKLHKKIG 119
           V              ++   K  +        D +     + +++ + +  A++L K+  
Sbjct: 73  VRRALDAGVDRYKIIFSGVGKRDDEIREALEKDILMLNLESEAEMKRVEMVAKELGKEAR 132

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           +  R+NP++              ++ G +        I        N  G+ FH   +  
Sbjct: 133 ISIRVNPNIDPQTHPYISTGLHENKFGVEIDMAKRMYIYANKSEYLNPVGIHFHIGSQLT 192

Query: 171 SFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                     ++ ++ +        I++  +GGGI     D    PV+D+ + + E ++ 
Sbjct: 193 KLDPIKESAVIVADLVRSLKVIKIDIKFFDVGGGIGVVYSDETTIPVRDYTEAIFEATKG 252

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES-ATIY 282
             V +  EPG  +V N     T+VL     + K  VIVD  +   +   L          
Sbjct: 253 LDVTLLCEPGRYMVANAGAFFTSVLYEKVNDGKRFVIVDGGMNDLIRPSLYNAYHKIDAV 312

Query: 283 PNTGPYTA-MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
              G  T   V G  C +GD FG+     P+K  D I       Y     + +N    P 
Sbjct: 313 MVEGERTFADVVGPVCESGDFFGKNVPLPPLKHNDLIVVHSAGAYGFTMASNYNTRPKPA 372

Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364
                        R  SY D   
Sbjct: 373 EVALEAGKDRLIRRRESYEDQVR 395


>gi|229529344|ref|ZP_04418734.1| hypothetical protein VCG_002439 [Vibrio cholerae 12129(1)]
 gi|229333118|gb|EEN98604.1| hypothetical protein VCG_002439 [Vibrio cholerae 12129(1)]
          Length = 377

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 165/368 (44%), Positives = 245/368 (66%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TPY++ID+ KL+ NL+ A ++++ +GVK++LALKCF+ WG+FD +  Y+DGTTSS  +
Sbjct: 6   LRTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG+E FGGETHAY+V Y + ++  V+  CD +IFN+ SQL  ++   +     +GLR
Sbjct: 66  EVKLGYETFGGETHAYSVGYSEEDVKEVIDICDKMIFNSQSQLAAYRHLVEGKAS-LGLR 124

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP VSY+   LA+P R FSRLG +     ES   ++NG+MFH NCENK    F  +L  
Sbjct: 125 INPGVSYAGQDLANPARQFSRLGVQADHIDESVFDSINGVMFHINCENKDVDAFIGLLDA 184

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I + FG ++ +++W+SLGGG+ FT   Y V+     LK F+E+++VQ+YLEPGEAI+T T
Sbjct: 185 ISERFGRYLDKLDWVSLGGGVFFTWPGYDVEKLGAALKAFAERHAVQLYLEPGEAIITKT 244

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299
           T L  TV+DI EN     IVDS+ EAH  D L+Y+E A++    + G +  ++   SCLA
Sbjct: 245 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASDKGQHEYVIGSCSCLA 304

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F    F++P+++G ++   D AGY + + NWFNG+ MP++  +  +G I+ I +F Y
Sbjct: 305 GDQFCVAKFDEPLQVGQKLHILDSAGYTMVKLNWFNGLKMPSVYCERKNGQIQKINQFGY 364

Query: 360 NDYYNNLS 367
            D+   LS
Sbjct: 365 EDFKRTLS 372


>gi|157415737|ref|YP_001482993.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|157386701|gb|ABV53016.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|307748378|gb|ADN91648.1| Carboxynorspermidine decarboxylase [Campylobacter jejuni subsp.
           jejuni M1]
          Length = 382

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 137/376 (36%), Positives = 210/376 (55%), Gaps = 18/376 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TP Y++++ KL  N +    + + +G K+LLALK FA  G    + +Y+ G T S L+
Sbjct: 6   IQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSGLW 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E     E    E H Y+ A+K+ EI  + S    I+FN+++Q +KF+ K       +GLR
Sbjct: 66  EAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQSK--TQKNSLGLR 123

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
            N   S +   L +P   +SRLG + KD    ++  + GL FH  CE +S     A+LK 
Sbjct: 124 CNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLNAIEGLHFHALCE-ESADALEAVLKV 182

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            +++FG +I Q++W++ GGG H T K Y V+      K FS+KY VQ+YLEPGEA+   T
Sbjct: 183 FKEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKYGVQVYLEPGEAVGWQT 242

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP---------------NTG 286
             L  +V+DI EN K + I+D+S EAH+PD ++   ++ +                    
Sbjct: 243 GNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKISDLKEN 302

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
            +  ++ G +CLAGD+ GE+ F+K +KIGD+I F D   Y I +   FNGI +P + + +
Sbjct: 303 EFAYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIHYTIVKNTTFNGIRLPNLMLLD 362

Query: 347 VDGTIKAIREFSYNDY 362
               ++ IREFSY DY
Sbjct: 363 HKNELQMIREFSYKDY 378


>gi|153802246|ref|ZP_01956832.1| carboxynorspermidine decarboxylase [Vibrio cholerae MZO-3]
 gi|124122228|gb|EAY40971.1| carboxynorspermidine decarboxylase [Vibrio cholerae MZO-3]
          Length = 387

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 165/368 (44%), Positives = 245/368 (66%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TPY++ID+ KL+ NL+ A ++++ +GVK++LALKCF+ WG+FD +  Y+DGTTSS  +
Sbjct: 16  LRTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSGPF 75

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG+E FGGETHAY+V Y + ++  V+  CD +IFN+ SQL  ++   +     +GLR
Sbjct: 76  EVKLGYETFGGETHAYSVGYSEEDVKEVIDICDKMIFNSQSQLAAYRHLVEGKVS-LGLR 134

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP VSY+   LA+P R FSRLG +     ES   ++NG+MFH NCENK    F  +L  
Sbjct: 135 INPGVSYAGQDLANPARQFSRLGVQADHIDESVFDSINGVMFHMNCENKDVDAFIGLLDA 194

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I + FG ++ +++W+SLGGG+ FT   Y V+     LK F+E+++VQ+YLEPGEAI+T T
Sbjct: 195 ISERFGRYLDKLDWVSLGGGVFFTWPGYDVEKLGAALKAFAERHAVQLYLEPGEAIITKT 254

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299
           T L  TV+DI EN     IVDS+ EAH  D L+Y+E A++    + G +  ++   SCLA
Sbjct: 255 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASDKGQHEYVIGSCSCLA 314

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F    F++P+++G ++   D AGY + + NWFNG+ MP++  +  +G I+ I +F Y
Sbjct: 315 GDQFCVAKFDEPLQVGQKLHILDSAGYTMVKLNWFNGLKMPSVYCERKNGQIQKINQFGY 374

Query: 360 NDYYNNLS 367
            D+   LS
Sbjct: 375 EDFKRTLS 382


>gi|261365975|ref|ZP_05978858.1| diaminopimelate decarboxylase [Neisseria mucosa ATCC 25996]
 gi|288565436|gb|EFC86996.1| diaminopimelate decarboxylase [Neisseria mucosa ATCC 25996]
          Length = 406

 Score =  241 bits (614), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 65/385 (16%), Positives = 128/385 (33%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L    +            +  A+K      +         G    S  E
Sbjct: 18  GTPLYVYSQSALTEAFENYQTAFAALSPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77

Query: 63  VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G   +T    V   + EI+ A+ +        ++ ++++ +  A++L     
Sbjct: 78  LARVLAAGGDAAKTIFSGVGKSEAEIEFALHAGVKCFNMESIPEIDRIQKVAERLGKTAS 137

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D +E+           + G+  H   +  
Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAARQSHLKIIGIDCHIGSQLT 197

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                    + I     +       +E + LGGG+    +D     +  + Q +++    
Sbjct: 198 DLSPLIEACERILILVDQLADEGIVLEHLDLGGGVGIVYQDETVPDLGAYAQAVQKLIGT 257

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++ LEPG ++V N  +L T V  +     KN V+VD+++   +   L          
Sbjct: 258 RRLKLILEPGRSLVGNAGSLLTRVEFVKHGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317

Query: 284 NTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                 P TA + G  C  GD  G+       + GD +       Y  +  + +N  N  
Sbjct: 318 EPKNIPPLTANIVGPICETGDFLGKDRTIA-CEEGDLLVIRSAGAYGASMASNYNTRNRA 376

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + +        R  +      N
Sbjct: 377 AEVLVDGSEYRLIRRRETLEQQMAN 401


>gi|224024113|ref|ZP_03642479.1| hypothetical protein BACCOPRO_00832 [Bacteroides coprophilus DSM
           18228]
 gi|224017335|gb|EEF75347.1| hypothetical protein BACCOPRO_00832 [Bacteroides coprophilus DSM
           18228]
          Length = 374

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 122/374 (32%), Positives = 189/374 (50%), Gaps = 17/374 (4%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE 68
           ++++ L  NL     +   AGV+++LA K FA W  F    +Y+  TT+SS YE  L +E
Sbjct: 1   MEEKLLRKNLSLIKQVADQAGVEIILAFKAFAMWKSFPIFREYIRFTTASSEYEARLAYE 60

Query: 69  KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IGLRINPSV 126
           +FG   HAY+ AY +    + L  C  I FN++SQ  +F   A    +    GLR+NP  
Sbjct: 61  EFGSRAHAYSPAYTEQNFPSFLKYCSHITFNSLSQFERFYPMAAAASEPISCGLRVNPEY 120

Query: 127 SYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF 186
           S  +  L +P  P +R G       +   + + G   H +CE+ S+      L++IE++F
Sbjct: 121 SEVEVELYNPCAPGTRFGVMADQLPDVLPEGIEGFHCHCHCESSSYE-LERTLQHIEEKF 179

Query: 187 GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNTTTLN 245
             +  Q++W++LGGG   T KDY  +     LK   ++Y   QI LEPG A    T  L 
Sbjct: 180 SRWFPQLKWLNLGGGHLMTRKDYDTEHLIGLLKGLKQRYPHLQIILEPGSAFTWQTGPLV 239

Query: 246 TTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT------------GPYTAMV 292
            +V+DI EN      + D S   H+PD L       +                G +   +
Sbjct: 240 ASVVDIVENRGIRTAILDVSFTCHMPDCLEMPYQPAVRGAETLPADAVKTASPGDHIYRL 299

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352
            G SCL+GD  G + F+  ++IG+RI FED+  Y + + N FNGI+ P++A+ + DG ++
Sbjct: 300 GGNSCLSGDYMGSWKFDHELQIGERIIFEDMIHYTMVKTNMFNGIHHPSVALLHEDGELE 359

Query: 353 AIREFSYNDYYNNL 366
             R F Y DY + +
Sbjct: 360 IYRNFRYEDYRDRM 373


>gi|299065455|emb|CBJ36624.1| Diaminopimelate decarboxylase [Ralstonia solanacearum CMR15]
          Length = 419

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 56/387 (14%), Positives = 115/387 (29%), Gaps = 26/387 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  N        +    ++  A+K  +   +     Q   G    S  E
Sbjct: 27  GTPTYVYSRAALTANYRAYAAACEGRNARVQYAMKANSNLAVLQIFAQLGAGFDIVSGGE 86

Query: 63  VMLGHEKFGG--ETHAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G   +     V    D    A+ +        ++ +L++  + A  L     
Sbjct: 87  LRRVLAAGGKAADVVFSGVGKTADEMRLALEAGVACFNVESIPELHRLNEVAGSLGKTAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G   ++ +             V G+  H   +  
Sbjct: 147 VSLRVNPDVDAKTHPYISTGLKGNKFGIAFEEVLPTYRAAAAMPNLRVVGIDCHIGSQIT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
               +   +    ++         ++  I +GGG+  T  D    D     +   ++   
Sbjct: 207 EVSPYLDAIDKVLDVVARLDAEGIRLSHIDVGGGLGITYTDETPPDITAFARTLLDRIEQ 266

Query: 228 Q------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280
           +      +  EPG ++V N   L T V  +         + D+++       +       
Sbjct: 267 RGFGDRTVLFEPGRSLVGNAGLLLTRVEFLKPGAAKNFCIVDAAMNDLARPAMYEAYHHI 326

Query: 281 IYPNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
           +        P    + G  C +GD  G        + GD ++      Y     + +N  
Sbjct: 327 VPVRERGGAPTVYDIVGPVCESGDWLGRDRAL-DAQPGDLLAILSAGAYGFTMSSNYNTR 385

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
                 + + D    A     + D   
Sbjct: 386 GRAAEVIVDGDRVHVARERERFEDLIR 412


>gi|258593057|emb|CBE69368.1| diaminopimelate decarboxylase [NC10 bacterium 'Dutch sediment']
          Length = 418

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 72/385 (18%), Positives = 112/385 (29%), Gaps = 23/385 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+YL     L ++  T      +    +  A+K  +             G    S  
Sbjct: 25  VGTPFYLYSHATLTHHFQTFDQAFADIPHLVCFAIKANSNGATLKLFADLGSGADVVSGG 84

Query: 62  EVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118
           E+              +    K  E        D       +  +L    D A  +  K 
Sbjct: 85  ELYRAMRAGIPPSRIVFAGVGKTREEMGFALKSDILMFNVESPQELRLLNDVAGAMGTKA 144

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCEN 169
              LRINP V              S+ G      +E           +V G+  H   + 
Sbjct: 145 RVALRINPDVDPKTHPYISTGLKKSKFGIDISLAMEEYRVAKELRHIDVVGVHQHIGSQI 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSE 223
                F   L  +     E       I+++ +GGG+  T KD        F + +    +
Sbjct: 205 TEIAPFVDSLVKVAGLIAELRQHGFAIQYLDVGGGLGITYKDEDPPVPRVFAEAMIAVIK 264

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES---- 278
                I LEPG  IV N   L T VL       K+ ++VD+ +   V   L         
Sbjct: 265 DLGCTIVLEPGRVIVGNAGVLVTKVLYDKRTPAKHFIVVDAGMNDLVRPSLYGSFHSILP 324

Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
           A          A V G  C +GD   +       + G+ +       Y     + +N   
Sbjct: 325 ARRQKGREEVMADVVGPVCESGDFLAKDRSMPAPEPGELLVVMSAGAYGYTMSSSYNSRP 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYY 363
                +   D         SY D  
Sbjct: 385 RLPEILVKGDRWFTIRERESYEDLI 409


>gi|229508264|ref|ZP_04397769.1| hypothetical protein VCF_003500 [Vibrio cholerae BX 330286]
 gi|229511497|ref|ZP_04400976.1| hypothetical protein VCE_002906 [Vibrio cholerae B33]
 gi|229518636|ref|ZP_04408079.1| hypothetical protein VCC_002661 [Vibrio cholerae RC9]
 gi|229520778|ref|ZP_04410201.1| hypothetical protein VIF_001303 [Vibrio cholerae TM 11079-80]
 gi|229523718|ref|ZP_04413123.1| hypothetical protein VCA_001288 [Vibrio cholerae bv. albensis
           VL426]
 gi|229607838|ref|YP_002878486.1| hypothetical protein VCD_002752 [Vibrio cholerae MJ-1236]
 gi|255744947|ref|ZP_05418897.1| carboxynorspermidine decarboxylase putative [Vibrio cholera CIRS
           101]
 gi|262161768|ref|ZP_06030786.1| carboxynorspermidine decarboxylase putative [Vibrio cholerae INDRE
           91/1]
 gi|262169641|ref|ZP_06037332.1| carboxynorspermidine decarboxylase putative [Vibrio cholerae RC27]
 gi|229337299|gb|EEO02316.1| hypothetical protein VCA_001288 [Vibrio cholerae bv. albensis
           VL426]
 gi|229342333|gb|EEO07328.1| hypothetical protein VIF_001303 [Vibrio cholerae TM 11079-80]
 gi|229343325|gb|EEO08300.1| hypothetical protein VCC_002661 [Vibrio cholerae RC9]
 gi|229351462|gb|EEO16403.1| hypothetical protein VCE_002906 [Vibrio cholerae B33]
 gi|229355769|gb|EEO20690.1| hypothetical protein VCF_003500 [Vibrio cholerae BX 330286]
 gi|229370493|gb|ACQ60916.1| hypothetical protein VCD_002752 [Vibrio cholerae MJ-1236]
 gi|255737418|gb|EET92813.1| carboxynorspermidine decarboxylase putative [Vibrio cholera CIRS
           101]
 gi|262021875|gb|EEY40585.1| carboxynorspermidine decarboxylase putative [Vibrio cholerae RC27]
 gi|262028500|gb|EEY47155.1| carboxynorspermidine decarboxylase putative [Vibrio cholerae INDRE
           91/1]
          Length = 377

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 165/368 (44%), Positives = 245/368 (66%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TPY++ID+ KL+ NL+ A ++++ +GVK++LALKCF+ WG+FD +  Y+DGTTSS  +
Sbjct: 6   LRTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG+E FGGETHAY+V Y + ++  V+  CD +IFN+ SQL  ++   +     +GLR
Sbjct: 66  EVKLGYETFGGETHAYSVGYSEEDVKEVIDICDKMIFNSQSQLAAYRHLVEGKAS-LGLR 124

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP VSY+   LA+P R FSRLG +     ES   ++NG+MFH NCENK    F  +L  
Sbjct: 125 INPGVSYAGQDLANPARQFSRLGVQADHIDESVFDSINGVMFHMNCENKDVDAFIGLLDA 184

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I + FG ++ +++W+SLGGG+ FT   Y V+     LK F+E+++VQ+YLEPGEAI+T T
Sbjct: 185 ISERFGRYLDKLDWVSLGGGVFFTWPGYDVEKLGAALKAFAERHAVQLYLEPGEAIITKT 244

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299
           T L  TV+DI EN     IVDS+ EAH  D L+Y+E A++    + G +  ++   SCLA
Sbjct: 245 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASDKGQHEYVIGSCSCLA 304

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F    F++P+++G ++   D AGY + + NWFNG+ MP++  +  +G I+ I +F Y
Sbjct: 305 GDQFCVAKFDEPLQVGQKLHILDSAGYTMVKLNWFNGLKMPSVYCERKNGQIQKINQFGY 364

Query: 360 NDYYNNLS 367
            D+   LS
Sbjct: 365 EDFKRTLS 372


>gi|323494766|ref|ZP_08099865.1| carboxynorspermidine decarboxylase [Vibrio brasiliensis LMG 20546]
 gi|323310959|gb|EGA64124.1| carboxynorspermidine decarboxylase [Vibrio brasiliensis LMG 20546]
          Length = 377

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 170/368 (46%), Positives = 248/368 (67%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPY++ID+ KL+ NL+ A  +++ +GVKL+LALKCF+ WG+FD +  Y+DGTTSS  +
Sbjct: 6   LKTPYFMIDEDKLVENLEKAKLLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG+E FGGETHAY+V Y + ++  V   CD +IFN+ SQL  ++   +     +GLR
Sbjct: 66  EVKLGYETFGGETHAYSVGYSEDDVREVADICDKMIFNSQSQLAAYRHIVEGKA-SLGLR 124

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP VSY+   LA+P R FSRLG +         ++++G+MFH NCENK    F A+L +
Sbjct: 125 LNPGVSYAGQDLANPARQFSRLGVQADHIKPQVFEDIDGVMFHMNCENKDVDAFIALLDS 184

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I ++FG ++ +++W+S+GGG+ FT   Y ++     LK FSEK+ VQ+YLEPGEAI+T T
Sbjct: 185 ISEQFGQYLDKLDWVSMGGGVFFTWPGYDIEKLGLALKAFSEKHGVQMYLEPGEAIITKT 244

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299
           T L  TV+DI EN+K   IVDS+ EAH  D L+Y E A+I      G +  ++   SCLA
Sbjct: 245 TDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYDEPASILEASEKGEHQYVIGSCSCLA 304

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F E +F++P++IG R+   D AGY + + NWFNG+ MP++  +  DG I+ + EF Y
Sbjct: 305 GDQFCEANFDQPLEIGQRLHILDSAGYTMVKLNWFNGLRMPSVYCQRSDGAIEKLNEFDY 364

Query: 360 NDYYNNLS 367
           +D+  +LS
Sbjct: 365 SDFKRSLS 372


>gi|262171366|ref|ZP_06039044.1| carboxynorspermidine decarboxylase putative [Vibrio mimicus MB-451]
 gi|261892442|gb|EEY38428.1| carboxynorspermidine decarboxylase putative [Vibrio mimicus MB-451]
          Length = 377

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 165/368 (44%), Positives = 244/368 (66%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPY++ID+ KL+ NL+ A ++++ +GVK++LALKCF+ WG+FD +  Y+DGTTSS  +
Sbjct: 6   LKTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIQPYLDGTTSSGPF 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG+E FGGETHAY+V Y + ++  V+  CD +IFN+ SQL  ++   +     +GLR
Sbjct: 66  EVKLGYETFGGETHAYSVGYSEDDVKEVVDICDKMIFNSQSQLAAYRHLVEGKAS-LGLR 124

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP VSY+   LA+P R FSRLG +     +S  + ++G+MFH NCENK    F ++L  
Sbjct: 125 INPGVSYAGQDLANPARKFSRLGVQADHIDDSVFETIDGVMFHMNCENKDVDAFISLLDA 184

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I + FG ++ +++W+SLGGG+ FT   Y V      LK FSE++ VQ+YLEPGEA++T T
Sbjct: 185 ISERFGRYLDKLDWVSLGGGVFFTWPGYDVDKLGAALKAFSERHGVQLYLEPGEAVITKT 244

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299
           T L  TV+DI EN     IVDS+ EAH  D L+Y+E A++    + G +  ++   SCLA
Sbjct: 245 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASDNGQHEYVIGSCSCLA 304

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F    F++P+K+G ++   D AGY + + NWFNG+ MP++  +  +G I+ I +F Y
Sbjct: 305 GDQFCVAKFDEPLKVGQKLHILDSAGYTMVKLNWFNGLKMPSVYCERQNGEIQKINQFGY 364

Query: 360 NDYYNNLS 367
            D+   LS
Sbjct: 365 EDFKRTLS 372


>gi|260576231|ref|ZP_05844223.1| diaminopimelate decarboxylase [Rhodobacter sp. SW2]
 gi|259021499|gb|EEW24803.1| diaminopimelate decarboxylase [Rhodobacter sp. SW2]
          Length = 421

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 58/390 (14%), Positives = 113/390 (28%), Gaps = 26/390 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +              +  A+K  +   +   L     G    S  
Sbjct: 25  VGTPFYCYSAATLTRHYALFTEALNPLPHLVCFAIKSLSNLAVLKLLGDLGAGMDVVSGG 84

Query: 62  EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E          G+   ++     +D    A+          +  +L      A +L    
Sbjct: 85  EYRRARAAGVPGDRIVFSGVGKTRDEMRLALQGGIRQFNVESEPELRALSQVATELGLTA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCEN 169
            I LR+NP V           +  ++ G           +        V G+  H   + 
Sbjct: 145 PIALRVNPDVDARTHEKIATGKKENKFGIPISRAPQVYAEAARLPGLQVVGIDVHIGSQL 204

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221
                F    + I    +        I  + LGGG+                +   ++  
Sbjct: 205 TELEPFEQAFQKIADLTQTLRAQGHDIRRLDLGGGLGIPYTRSNEAPPLPLDYGAMIQRT 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                 +I +EPG  I  N   L   V+ + +   ++ +I+D+++       +       
Sbjct: 265 LGHLGCEIEIEPGRLISGNAGVLVAGVIYVKQGEDRDFLILDAAMNDLARPSMYGAHHDI 324

Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +     P         V G  C  GD F +     P+  GD ++F     Y     + +N
Sbjct: 325 LPVTEAPPGTEMQPYDVVGPVCETGDSFAKGRALPPLAEGDLVAFRSAGAYGAVMASEYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              +    +   D         ++++  N 
Sbjct: 385 SRPLIPEVLVQGDHYAVIRARPTFDEILNR 414


>gi|53804982|ref|YP_113352.1| diaminopimelate decarboxylase [Methylococcus capsulatus str. Bath]
 gi|53758743|gb|AAU93034.1| diaminopimelate decarboxylase [Methylococcus capsulatus str. Bath]
          Length = 415

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 55/385 (14%), Positives = 126/385 (32%), Gaps = 24/385 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  +   + + L +   G    S+ E
Sbjct: 26  GTPCYVYSRATLERHWHAFDAALGDCPHLVCYAVKANSNIAILNLLARLGSGFDIVSVGE 85

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +              ++     +D    A+ +           +L++    A  + +   
Sbjct: 86  LERVLAAGGDPSRVVFSGVGKREDELARALDTGIRCFNVEVAEELDRLDRLAGERGVKAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCE-- 168
           + LR+NP V              ++ G + ++ +    +        V G+  H   +  
Sbjct: 146 VSLRVNPDVDAGTHPYISTGLSENKFGIEVEEALVQYRRAARMPNLEVVGIDCHIGSQLT 205

Query: 169 -NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
            +  F+     +  +          I  + LGGG+    +D        + ++L     +
Sbjct: 206 SSMPFIDALDRVLALVARLRGEGIAIRHLDLGGGLGIRYRDEDPPHPTEYAEQLFRRLGR 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATI-- 281
           +  +I +EPG A+  N   L T +  +     K+  IVD+++   +   L       +  
Sbjct: 266 HDFEILIEPGRAVAGNAGILLTRLEYLKANQTKHFAIVDAAMNDLLRPALYGAWQEIVPV 325

Query: 282 --YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
               +   ++  V G  C  GD  G+    + +  GD ++      Y  +  + +N    
Sbjct: 326 APRNDVESHSYDVVGPVCETGDFLGKSRELR-LVPGDLLAVRSAGAYGFSMSSNYNSRPR 384

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
           P   + +           +    + 
Sbjct: 385 PAEILVDGSAVYLIRERENVARLFA 409


>gi|115526828|ref|YP_783739.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris BisA53]
 gi|115520775|gb|ABJ08759.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris BisA53]
          Length = 421

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 65/390 (16%), Positives = 114/390 (29%), Gaps = 28/390 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +         +    +  A+K  +   +  TL +   G    S  
Sbjct: 25  VGTPFYCYSTATLERHYRVFTEAFADTDALVCYAMKANSNQSVLRTLAKLGAGADVVSGG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E+              ++   K  D    A+  +   I   +  +L      A  +    
Sbjct: 85  EMARALAAGIPPSKIVFSGVGKTVDELRAALDHDILCINVESEPELEMLSALAMSMGKTA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCEN 169
            I +R+NP V           +  ++ G                    V G+  H   + 
Sbjct: 145 TISIRVNPDVDSGTHAKISTGKSENKFGIPLVKAREVYARAAALPGLRVTGVDVHIGSQI 204

Query: 170 KSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221
                  A  + +             I  +  GGG+     + P        +   +K  
Sbjct: 205 TDLGPMEAAFRLLADFVTVLRGDGHTISHVDFGGGLGIPYYEDPTTPPEPLAYAAMVKRI 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
           +     ++  EPG  IV N   L   V+ +   + K  VI+D+++   +    LY+    
Sbjct: 265 THNLGCRLMFEPGRMIVGNAGILVARVIHVKHGDGKTFVIIDAAMNDLIRPT-LYEAYHD 323

Query: 281 IYPNT------GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
           I P        G  TA V G  C  GD          +K GD I+      Y   +   +
Sbjct: 324 ILPIKAPAPGAGEITADVVGPVCETGDYLALSRRLPALKSGDLIAIMTAGAYGAVQACTY 383

Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           N   +    +   D         S      
Sbjct: 384 NTRPLVPEVLVKGDQYAVIRPRLSVEQLIA 413


>gi|237756659|ref|ZP_04585168.1| diaminopimelate decarboxylase [Sulfurihydrogenibium yellowstonense
           SS-5]
 gi|237691179|gb|EEP60278.1| diaminopimelate decarboxylase [Sulfurihydrogenibium yellowstonense
           SS-5]
          Length = 419

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 55/380 (14%), Positives = 126/380 (33%), Gaps = 22/380 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+++  K+ +L+ ++      K+    +  ALK  +   +     +   G    S  
Sbjct: 29  VGTPFFVYSKKAILDKINQYKEAFKDYDTLICYALKANSNLSLLKIFEENGLGADIVSGG 88

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116
           E+       F      Y    K       A+  N  +    +  +L+   + A  Q+   
Sbjct: 89  ELYKAKKAGFSSNKIVYAGVGKTDFEISYAISENILSFNVESFMELDVINEIASKQEKKA 148

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            + +R+NP+V              S+ G      +++  K       NV G+  H   + 
Sbjct: 149 NVSIRVNPNVDPKTHPYISTGLKKSKFGIDIDQALDAYKKAVKLENLNVVGVHCHIGSQI 208

Query: 170 KSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF----CQRLKEFS 222
                F    +   ++  +      ++++I +GGG+                   +    
Sbjct: 209 MDVSVFREAAEKVVDLVFKLKKEGIELKFIDMGGGLGVKYHPDDNPPTPKDLADAIIPVV 268

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATI 281
           ++  +++ +EPG +++     L T V+ + +  +   ++ DS +   V   +       +
Sbjct: 269 KQTGLKLIIEPGRSLIAEAGALITKVIFLKDKQEKHFVIVDSGMNDLVRPAMYNAYHHVL 328

Query: 282 YPNTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                     A + G  C  GD          V+ GD ++      Y  +  + +N   +
Sbjct: 329 NVQEKDEEMIADIVGPICETGDFLALDRKIGKVERGDLLAIMTAGAYGSSMSSNYNVRPI 388

Query: 340 PTIAVKNVDGTIKAIREFSY 359
               + +            Y
Sbjct: 389 ALEVLVDGPNFKVIKEREDY 408


>gi|84386971|ref|ZP_00989995.1| carboxynorspermidine decarboxylase [Vibrio splendidus 12B01]
 gi|84378261|gb|EAP95120.1| carboxynorspermidine decarboxylase [Vibrio splendidus 12B01]
          Length = 377

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 168/368 (45%), Positives = 242/368 (65%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPY++I++ KL+ NL+ A  +++ +GVKL+LALKCF+ WG+FD +  Y+DGTTSS  Y
Sbjct: 6   LKTPYFMINEDKLIANLEIAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LGHE FGGETHAY+V Y + ++  V   CD +IFN+ SQ   ++   +     +GLR
Sbjct: 66  EVKLGHETFGGETHAYSVGYSEDDVREVADICDKMIFNSQSQFEAYRHIVEGKA-SLGLR 124

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP VSY+   LA+P R FSRLG +           +NG+MFH NCENK    F  +L++
Sbjct: 125 LNPGVSYAGQDLANPARQFSRLGVQADHIKPEIFDEINGVMFHMNCENKDVDAFIGLLES 184

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I ++FG  + +++W+S+GGG+ FT   Y ++     LK FSEK+ VQ+YLEPGEAI+T T
Sbjct: 185 ISEQFGEHLDKLDWVSMGGGVFFTWPGYDIEKLGLALKAFSEKHGVQMYLEPGEAIITKT 244

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299
           T L  TV+DI EN+K   IVDS+ EAH  D L+Y E A++      G +  ++   SCLA
Sbjct: 245 TDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPASVLEASENGSHDYVIGSCSCLA 304

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F E  F++P+KIG ++   D AGY + + NWFNG+ MP+I  +  +G ++ + EF Y
Sbjct: 305 GDQFCEASFDEPLKIGQKLHLLDSAGYTMVKLNWFNGLKMPSIYCERSNGDVQKLNEFGY 364

Query: 360 NDYYNNLS 367
            D+  +LS
Sbjct: 365 EDFKRSLS 372


>gi|325141466|gb|EGC63940.1| diaminopimelate decarboxylase [Neisseria meningitidis 961-5945]
 gi|325199068|gb|ADY94524.1| diaminopimelate decarboxylase [Neisseria meningitidis G2136]
          Length = 414

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 70/385 (18%), Positives = 127/385 (32%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L    +            +  A+K      +         G    S  E
Sbjct: 18  GTPLYVYSQSALTEAFEHYQTAFAELSPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77

Query: 63  VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G   +T    V   + EI+ A+ +        ++ ++++ +  A  L     
Sbjct: 78  LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAAHLGKTAP 137

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LRINP V              ++ G    D +E+           + G+  H   +  
Sbjct: 138 VSLRINPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLT 197

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
                    + I             +E + LGGG+    +D  V D   + Q +++    
Sbjct: 198 DLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDEDVPDLGAYAQAVQKLIGT 257

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++ LEPG ++V N  +L T V  +     KN V+VD+++   +   L          
Sbjct: 258 RRLKLILEPGRSLVGNAGSLLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317

Query: 284 NTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
            T      TA + G  C  GD  G+       + GD +       Y  +  + +N  N  
Sbjct: 318 ETKDIATLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNARNRA 376

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + N  G     R  +      N
Sbjct: 377 AEVLVNGGGYKLIRRRETLEQQMAN 401


>gi|254674321|emb|CBA10105.1| Diaminopimelate decarboxylase [Neisseria meningitidis alpha275]
          Length = 406

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 70/385 (18%), Positives = 127/385 (32%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L    +            +  A+K      +         G    S  E
Sbjct: 18  GTPLYVYSQSALTEAFEHYQTAFAELSPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77

Query: 63  VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G   +T    V   + EI+ A+ +        ++ ++++ +  A  L     
Sbjct: 78  LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAAHLGKTAP 137

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LRINP V              ++ G    D +E+           + G+  H   +  
Sbjct: 138 VSLRINPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLT 197

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
                    + I             +E + LGGG+    +D  V D   + Q +++    
Sbjct: 198 DLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDEDVPDLGAYAQAVQKLIGT 257

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++ LEPG ++V N  +L T V  +     KN V+VD+++   +   L          
Sbjct: 258 RRLKLILEPGRSLVGNAGSLLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317

Query: 284 NTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
            T      TA + G  C  GD  G+       + GD +       Y  +  + +N  N  
Sbjct: 318 ETKDIATLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNARNRA 376

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + N  G     R  +      N
Sbjct: 377 AEVLVNGGGYKLIRRRETLEQQMAN 401


>gi|254501211|ref|ZP_05113362.1| diaminopimelate decarboxylase [Labrenzia alexandrii DFL-11]
 gi|222437282|gb|EEE43961.1| diaminopimelate decarboxylase [Labrenzia alexandrii DFL-11]
          Length = 424

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 68/389 (17%), Positives = 123/389 (31%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+     L  + +       +    +  A+K  +   +  TL Q   G    S  
Sbjct: 25  VGTPFYVYSTATLTRHYEVFSSAFADIPSLVCYAMKANSNQAVLATLAQLGAGMDVVSEG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118
           E+              ++   K     A     D       +  +L++    A K+ K  
Sbjct: 85  ELRRARAAGVPANKIVFSGVGKTETEQAYALTEDILCFNVESEPELHQLSRVATKIGKTA 144

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
              +RINP V           +  ++ G   +   E            V G+  H   + 
Sbjct: 145 RVSMRINPDVDAKTHAKIATGKAENKFGIPWQRAREVYATAASLPGLKVTGIDMHIGSQI 204

Query: 170 KSFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221
                F +       +  +       I+ + LGGG+                + + +K+ 
Sbjct: 205 TELEPFDSAFARLGELITDLRGQGHAIDHVDLGGGLGIPYVTDNDPPPHPDAYAEVVKKH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
             +   ++  EPG  I  N   L T V+ + E   KN VIVD+ +   +   L       
Sbjct: 265 VRELDCKVMFEPGRMIAGNAGILVTQVIYVKEGADKNFVIVDAGMNDLIRPTLYEAYHEV 324

Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
              +        +TA V G  C  GD   +      V  GD ++      Y   + + +N
Sbjct: 325 RPVSEPDVNADRFTADVVGPVCETGDFLAQNRDMPKVNAGDMLAVYSAGAYGSVQSSTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    + N D         SY +  +
Sbjct: 385 SRLLVPEVLVNADQFAVIRPRPSYEELLD 413


>gi|77464302|ref|YP_353806.1| diaminopimelate decarboxylase [Rhodobacter sphaeroides 2.4.1]
 gi|332559193|ref|ZP_08413515.1| diaminopimelate decarboxylase [Rhodobacter sphaeroides WS8N]
 gi|77388720|gb|ABA79905.1| diaminopimelate decarboxylase [Rhodobacter sphaeroides 2.4.1]
 gi|332276905|gb|EGJ22220.1| diaminopimelate decarboxylase [Rhodobacter sphaeroides WS8N]
          Length = 421

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 56/392 (14%), Positives = 116/392 (29%), Gaps = 26/392 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +              +  A+K  +   +   L     G    S  
Sbjct: 25  VGTPFYCYSAATLERHYRLFTEALTPLPHLVCFAIKSLSNLAVLKLLGDLGAGMDVVSAG 84

Query: 62  EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116
           E +        G+   ++     ++    A+          +  ++    + A    L  
Sbjct: 85  EYLRARAAGVPGDRIVFSGVGKTREEMRIALEGGIRQFNVESEPEMRALSEVASSMGLRA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCEN 169
            I +R+NP V           +  ++ G   +       +        V G+  H   + 
Sbjct: 145 PIAVRVNPDVDARTHEKIATGKKENKFGIPIERASEVYAEAAALPGLEVMGIDVHIGSQL 204

Query: 170 KSFLCFSAML---KNIEKEFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221
                F         +         +I  + LGGG+               D+   +K  
Sbjct: 205 TELEPFEQAYLKVAELTGRLRAEGHEIRRLDLGGGLGIPYTRSNEAPPLPTDYGALIKRT 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280
                 +I +EPG  I  N+  L + V+ +     ++ +I+D+++   V   +       
Sbjct: 265 VGHLGCEIEIEPGRLISGNSGVLVSRVIYVKNGEGRDFLILDAAMNDLVRPSMYGAHHDI 324

Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +               V G  C  GD F +     P+  GD ++F     Y     + +N
Sbjct: 325 VPLAEAAPGTESQPYDVVGPVCETGDTFAKARALPPMAEGDLVAFRSAGAYGAVMASEYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367
              +    +   D         ++++     S
Sbjct: 385 SRPLVPEVLVRGDHFAVIRARPTFDEMLGRDS 416


>gi|126463144|ref|YP_001044258.1| diaminopimelate decarboxylase [Rhodobacter sphaeroides ATCC 17029]
 gi|126104808|gb|ABN77486.1| diaminopimelate decarboxylase [Rhodobacter sphaeroides ATCC 17029]
          Length = 421

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 56/392 (14%), Positives = 116/392 (29%), Gaps = 26/392 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +              +  A+K  +   +   L     G    S  
Sbjct: 25  VGTPFYCYSAATLERHYRLFTEALTPLPHLVCFAIKSLSNLAVLKLLGDLGAGMDVVSAG 84

Query: 62  EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116
           E +        G+   ++     ++    A+          +  ++    + A    L  
Sbjct: 85  EYLRARAAGVPGDRIVFSGVGKTREEMRIALEGGIRQFNVESEPEMRALSEVASSMGLRA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCEN 169
            I +R+NP V           +  ++ G   +       +        V G+  H   + 
Sbjct: 145 PIAVRVNPDVDARTHEKIATGKKENKFGIPIERASEVYAEAAALPGLEVMGIDVHIGSQL 204

Query: 170 KSFLCFSAML---KNIEKEFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221
                F         +         +I  + LGGG+               D+   +K  
Sbjct: 205 TELEPFEQAYLKVAELTGRLRAEGHEIRRLDLGGGLGIPYTRSNEAPPLPTDYGALIKRT 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280
                 +I +EPG  I  N+  L + V+ +     ++ +I+D+++   V   +       
Sbjct: 265 VGHLGCEIEIEPGRLISGNSGVLVSRVIYVKNGEGRDFLILDAAMNDLVRPSMYGAHHDI 324

Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +               V G  C  GD F +     P+  GD ++F     Y     + +N
Sbjct: 325 VPLAEAAPGTDSQPYDVVGPVCETGDTFAKARALPPMAEGDLVAFRSAGAYGAVMASEYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367
              +    +   D         ++++     S
Sbjct: 385 SRPLVPEVLVRGDHFAVIRARPTFDEMLGRDS 416


>gi|254438389|ref|ZP_05051883.1| diaminopimelate decarboxylase [Octadecabacter antarcticus 307]
 gi|198253835|gb|EDY78149.1| diaminopimelate decarboxylase [Octadecabacter antarcticus 307]
          Length = 421

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 56/390 (14%), Positives = 116/390 (29%), Gaps = 26/390 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+     LL +              +  A+K  +   +   L     G    S  
Sbjct: 25  VGTPFYVYSTATLLRHFQLFDDALAGMDHLICFAVKSLSNVAVLKLLGDAGAGMDVVSGG 84

Query: 62  EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E +        G+   ++     ++    A++         +  ++    + A  L K  
Sbjct: 85  EYLRAKAAGVSGDRIVFSGIGKTREEMRLALVGGIRQFNVESEPEMEVLSEVAMSLGKIA 144

Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            +  R+NP V           +   + G       +            + G+  H   + 
Sbjct: 145 PITVRVNPDVDAKTHAKISTGKKEDKFGIPISRARDVYAMAAKLPGLKIIGIDVHIGSQL 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221
                F    + + +   +       I  + LGGG+                +   +KE 
Sbjct: 205 TELEPFRLAYRKVAELTEQLRSDGHDISRLDLGGGLGIPYARDNNAPPLPIEYGALIKEE 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                 +I +EPG  I  N   L   V+ +     +  +IVD+++   +   +       
Sbjct: 265 VGHLGCEIEIEPGRLISGNAGLLVAKVIYVKSGEDREFLIVDAAMNDLIRPAMYDAWHDI 324

Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +               V G  C +GD F +      ++    + F     Y+    + +N
Sbjct: 325 VPVIESAAGVEQTPYDVVGPICESGDTFAKGRMLPTLQSEALVGFRSAGAYSAVMSSEYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              +    + N D      R  ++ D  N 
Sbjct: 385 SRPLIPEVLVNGDQFAVIRRRPTFEDMINR 414


>gi|323345634|ref|ZP_08085857.1| carboxynorspermidine decarboxylase [Prevotella oralis ATCC 33269]
 gi|323093748|gb|EFZ36326.1| carboxynorspermidine decarboxylase [Prevotella oralis ATCC 33269]
          Length = 417

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 121/377 (32%), Positives = 190/377 (50%), Gaps = 16/377 (4%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y+ ++++L +NL     + + A V+++LA K FA W  F    +Y+  TT+SSLYE  
Sbjct: 41  PAYVAEERRLRHNLSIINKVAERADVEIILAFKAFALWKCFPIFREYIRATTASSLYEAR 100

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ--KLHKKIGLRI 122
           LG E+FG +TH ++ AY D EI+ + S    + FN++SQ  +F  +         IGLR+
Sbjct: 101 LGFEEFGAKTHTFSPAYTDYEINDIASYSSHLTFNSLSQYERFHKRVCKENPDISIGLRV 160

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           NP  S     L +P  P +R G           K+V+G   H +CE+     F   L +I
Sbjct: 161 NPEYSEVSTDLYNPCSPGTRFGITADKLPAVLPKDVDGFHCHCHCESG-ADVFERTLAHI 219

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNT 241
           E +F  +  Q++WI+ GGG   T KDY ++     L+ F  +Y   +I LEPG A     
Sbjct: 220 EGKFSKWFPQLKWINFGGGHLITRKDYDIERLVYILQRFHARYPNLKIILEPGSAFAWQI 279

Query: 242 TTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT-----------GPYT 289
            +L + V+DI E+      V + S   H+PD L       +                 + 
Sbjct: 280 GSLVSQVVDIVEDQYIRTAVLNVSFTCHMPDCLEMPYMPNVRGAEIVEESNVNDKAKEFL 339

Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349
             + G SCLAGD  G + F+  +K+G+ + FED+  Y   +   FNGI  P+I + + DG
Sbjct: 340 YRLGGNSCLAGDFMGMWQFDHELKVGENVIFEDMIHYTTVKTCMFNGITHPSIVIAHDDG 399

Query: 350 TIKAIREFSYNDYYNNL 366
            ++ +R+F Y DY + +
Sbjct: 400 RLEILRQFGYEDYKSRM 416


>gi|221640187|ref|YP_002526449.1| diaminopimelate decarboxylase [Rhodobacter sphaeroides KD131]
 gi|221160968|gb|ACM01948.1| Diaminopimelate decarboxylase [Rhodobacter sphaeroides KD131]
          Length = 435

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 56/392 (14%), Positives = 116/392 (29%), Gaps = 26/392 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +              +  A+K  +   +   L     G    S  
Sbjct: 39  VGTPFYCYSAATLERHYRLFTEALTPLPHLVCFAIKSLSNLAVLKLLGDLGAGMDVVSAG 98

Query: 62  EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116
           E +        G+   ++     ++    A+          +  ++    + A    L  
Sbjct: 99  EYLRARAAGVPGDRIVFSGVGKTREEMRIALEGGIRQFNVESEPEMRALSEVASSMGLRA 158

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCEN 169
            I +R+NP V           +  ++ G   +       +        V G+  H   + 
Sbjct: 159 PIAVRVNPDVDARTHEKIATGKKENKFGIPIERASEVYAEAAALPGLEVMGVDVHIGSQL 218

Query: 170 KSFLCFSAML---KNIEKEFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221
                F         +         +I  + LGGG+               D+   +K  
Sbjct: 219 TELEPFEQAYLKVAELTGRLRAEGHEIRRLDLGGGLGIPYTRSNEAPPLPTDYGALIKRT 278

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280
                 +I +EPG  I  N+  L + V+ +     ++ +I+D+++   V   +       
Sbjct: 279 VGHLGCEIEIEPGRLISGNSGVLVSRVIYVKNGEGRDFLILDAAMNDLVRPSMYGAHHDI 338

Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +               V G  C  GD F +     P+  GD ++F     Y     + +N
Sbjct: 339 VPLAEAAPGTESQPYDVVGPVCETGDTFAKARALPPMAEGDLVAFRSAGAYGAVMASEYN 398

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367
              +    +   D         ++++     S
Sbjct: 399 SRPLVPEVLVRGDHFAVIRARPTFDEMLGRDS 430


>gi|257092050|ref|YP_003165691.1| diaminopimelate decarboxylase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257044574|gb|ACV33762.1| diaminopimelate decarboxylase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 414

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 64/384 (16%), Positives = 120/384 (31%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++  +  L  +L             +  A+K  +   + D   +   G    S  E
Sbjct: 26  GTPCWVYSRAALEASLAEFERELAGLDALVCYAVKANSNLAVLDVFARRGAGFDIVSGGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++   K      +    D       +  +L++    A +L     
Sbjct: 86  LRRALAAGADPRRIVFSGVGKTAAEMELALAADILCFNVESAPELDRLSAVAGRLGKTAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           I LR+NP V              ++ G   ++ +             ++G+  H   +  
Sbjct: 146 ISLRVNPDVDAKTHPYISTGLKENKFGVAYEEALALYRHAASLPNLTISGIDCHIGSQLL 205

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--- 224
               F+A L  I     +       +  I LGGG+    +D         L+   +K   
Sbjct: 206 DPAPFAAALDKILTLVDQLAANGIVLHHIDLGGGLGIRYRDEDAPTVQAYLQPMLQKLRD 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES---AT 280
             +Q+ LEPG  +V N   L T V  +    +KN  IVD+++       L          
Sbjct: 266 RHLQVLLEPGRRLVGNAGLLLTRVEYLKPGEVKNFAIVDAAMNDLARPALYGSWHDIVPV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
           + P        + G  C +GD  G       +  GD ++      Y +   + +N     
Sbjct: 326 VAPQGATRPWEIVGPVCESGDFLGHGRDLA-LATGDLLAIMSAGAYGMAMSSNYNSRPRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + +        R  +  + Y 
Sbjct: 385 AEVMVDGADVHLVRRRETAEELYA 408


>gi|309782874|ref|ZP_07677594.1| diaminopimelate decarboxylase [Ralstonia sp. 5_7_47FAA]
 gi|308918298|gb|EFP63975.1| diaminopimelate decarboxylase [Ralstonia sp. 5_7_47FAA]
          Length = 419

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 60/387 (15%), Positives = 114/387 (29%), Gaps = 26/387 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  N        +     +  A+K  +   +     Q   G    S  E
Sbjct: 27  GTPTYVYSRAALTANYRAYAAACEGRNAHVQYAMKANSNLAVLQVFAQLGAGFDIVSAGE 86

Query: 63  VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +              ++   K  D    A+          ++ +L++  D A        
Sbjct: 87  LKRVLAAGAPAAKVVFSGVGKSADEMRFALKVGVACFNVESIPELHRLNDVAASMGKVAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           + LRINP V              ++ G    + +             V G+  H   +  
Sbjct: 147 VSLRINPDVDAKTHPYISTGLKGNKFGVAFDEVLPTYRAAAAMPNLRVVGIDCHIGSQIT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
               +   L    ++  +      ++  I +GGG+  T  D    D     +   ++   
Sbjct: 207 EVSPYLDALDKVLDVVTQLDAEGIRLAHIDVGGGLGITYTDETPPDITAFARTLLDRVEQ 266

Query: 228 Q------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280
           +      +  EPG ++V N   L T V  +         + D+++       +       
Sbjct: 267 RGFGDRTVLFEPGRSLVGNAGLLLTRVEYLKPGASKNFCIVDAAMNDLARPAMYEAYHHI 326

Query: 281 IYPNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
           +        P    V G  C +GD  G       V+ GD ++      Y     + +N  
Sbjct: 327 VPVRESQSAPVVYDVVGPVCESGDWLGRDRSLA-VQPGDVLAILSAGAYGFTMSSNYNTR 385

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
           N     + + D    A     + D   
Sbjct: 386 NRAAEVIVDGDKVHLARERECFEDLIR 412


>gi|170719432|ref|YP_001747120.1| diaminopimelate decarboxylase [Pseudomonas putida W619]
 gi|169757435|gb|ACA70751.1| diaminopimelate decarboxylase [Pseudomonas putida W619]
          Length = 415

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 58/384 (15%), Positives = 119/384 (30%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +     +     +     +  A+K  +  G+ + L +   G    S  E
Sbjct: 26  GTPTYVYSRAHIEAQYRSYTDALQGVEHLVCFAVKANSNLGVLNVLARMGAGFDIVSGGE 85

Query: 63  VMLGHEKFG-GETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +       G  +   ++     ++    A+          +  +L + +  A ++ K   
Sbjct: 86  LERVLAAGGRADRVVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQVVAAEMGKVAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D         +     V G+  H   +  
Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEAIYVRAAQLPNLEVVGVDCHIGSQLT 205

Query: 171 SFLCF---SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--- 224
           +   F      L ++          +  + LGGG+    +D         +K   E+   
Sbjct: 206 TVEPFLDALDRLLDLVDRLADCGIHLRHLDLGGGVGVRYRDEEPPLVADYIKAIRERVGD 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---AT 280
             + +  EPG  IV N   L T V  +         I+D+++   +   L        A 
Sbjct: 266 RDLALVFEPGRYIVANAGALLTRVEYLKHTEHKDFAIIDAAMNDLIRPALYQAWMGVSAV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                      + G  C  GD   +      +  GD ++ +    Y     + +N     
Sbjct: 326 TPREGEGRAYDLVGPICETGDFLAKDRQL-NLAEGDLLAVQSAGAYGFVMSSNYNTRGRC 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + + D   +  R  +  + Y 
Sbjct: 385 AEILVDGDQAFEVRRRETIAELYA 408


>gi|316936209|ref|YP_004111191.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris DX-1]
 gi|315603923|gb|ADU46458.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris DX-1]
          Length = 421

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 56/389 (14%), Positives = 106/389 (27%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +              +  A+K  +   +  TL +   G    S  
Sbjct: 25  VGTPFYCYSTATLERHYRVFTEAFAGLDALVCYAMKANSNQSVLRTLARLGAGADVVSGG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118
           E+              ++   K           D   +   +  +L      A +  +  
Sbjct: 85  ELQRALAAGIPPGKIVFSGVGKTEAELRAALAHDIKCLNVESEPELELLSRLAVETGRTA 144

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
              LR+NP V           +  ++ G   +   E   +        V G+  H   + 
Sbjct: 145 RISLRVNPDVDSGTHAKISTGKSENKFGIPIRHAREVYARAARLPGIQVTGVDVHIGSQI 204

Query: 170 KSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEF 221
                       +             +  +  GGG+     +          + + +K  
Sbjct: 205 IDLAPMEAAFRKVAEFVHVLRGDGHTVSHVDFGGGLGIPYYEDRDAPPEPFAYAEMVKRV 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
           +      +  EPG  IV N   L   V+ +   + K  VI+D+++   +   L       
Sbjct: 265 THNLGCALLFEPGRMIVGNAGILVARVIYVKHGDGKTFVIIDAAMNDLIRPTLYEAYHEI 324

Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +             A V G  C  GD          +K GD I+      Y   +   +N
Sbjct: 325 VAVQQPAPGAASMVADVVGPVCETGDYLALDRKLPELKAGDLIAIMTSGAYGAVQACTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    +   D        F+      
Sbjct: 385 TRPLVPEVLVKDDQVAVVRPRFTVEQLIA 413


>gi|325266603|ref|ZP_08133280.1| diaminopimelate decarboxylase [Kingella denitrificans ATCC 33394]
 gi|324982046|gb|EGC17681.1| diaminopimelate decarboxylase [Kingella denitrificans ATCC 33394]
          Length = 407

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 63/386 (16%), Positives = 119/386 (30%), Gaps = 26/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  + +L                 +  A+K  +   +     +   G  + S  E
Sbjct: 17  GTPLYVYSENELTQAYARYQTAFVALNPLICYAVKANSNLSIIRHFARLGSGFDTVSGGE 76

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117
           +          +   ++   K         N         ++ +L++    AQ+L     
Sbjct: 77  IARVLAAGGSADKIIFSGVGKSEVEIEFALNAGIKCFNVESLPELDRINAVAQRLGKTAP 136

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           + LRINP V              ++ G    D  ++           + G+  H   +  
Sbjct: 137 VSLRINPDVDAKTHPYISTGLKANKFGIAMADAEQAYRHAGSLHHLRIVGIDCHIGSQLM 196

Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                    + + +           +E I LGGGI    ++     +  +   ++     
Sbjct: 197 DLSPLIEACERLLQLTDRLAGQGIVLEHIDLGGGIGIAYQNEQSPDLAAYAAAVQTLLAG 256

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
               + LEPG ++V N  TL T V  +     KN VIVD+++   +    LYQ    I  
Sbjct: 257 RPQSLVLEPGRSLVGNAGTLLTRVEYVKRGEEKNFVIVDAAMNDLMRPA-LYQAYHNIEN 315

Query: 284 NTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
                      A + G  C  GD           + GD +       Y  +  + +N   
Sbjct: 316 AETSERQPVFLADIVGPICETGDFLARDRMIS-AQAGDLLLVRSAGAYASSMASNYNTRG 374

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364
                + + D         ++ D + 
Sbjct: 375 RAAEVLVSGDKVRLIRPRETWEDVFA 400


>gi|307565290|ref|ZP_07627783.1| carboxynorspermidine decarboxylase [Prevotella amnii CRIS 21A-A]
 gi|307345959|gb|EFN91303.1| carboxynorspermidine decarboxylase [Prevotella amnii CRIS 21A-A]
          Length = 394

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 120/375 (32%), Positives = 194/375 (51%), Gaps = 14/375 (3%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y++++ KL  NL     I   A V+++LA K +A W  F    +Y++ TT+SSL E  
Sbjct: 20  PMYVLEEDKLRKNLSLIANIANKASVEIILAFKAYALWKTFPIFREYINATTASSLNEAR 79

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKIGLRI 122
           LG E+FG   H ++ AY D EI  ++     + FN++ Q  ++  KA        +G+R+
Sbjct: 80  LGLEEFGTPCHTFSPAYTDYEIKDIVKCSSHLTFNSLQQYERYHLKARAYNKKISLGIRV 139

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           NP  S  K +L +P  P +R G   K+  E    ++ G   H +CEN S   F   L +I
Sbjct: 140 NPEYSEIKTLLYNPCAPGTRFGILAKNIPEKLPSDIEGFHIHCHCENGS-DVFERTLAHI 198

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNT 241
           E++F  + +Q++WI+ GGG   T  +Y +      L+ F  +Y   ++ LEPG A     
Sbjct: 199 EEKFAVWFSQLKWINFGGGHLMTHANYNIDKLINILQGFHNRYPWLKVILEPGSAFGWQV 258

Query: 242 TTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTG---------PYTAM 291
            TL + V+DI E+      + + S  AH+PD L    +  +              P+T  
Sbjct: 259 GTLVSQVVDIIEDRGYRTAILNVSFTAHMPDCLEMPYNPIVRGAETQPNSGKTTDPFTYR 318

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
           + G SCL+GD  G + F+  ++IG+ I FED+  Y   + N FNGI+ P IA+ + +  +
Sbjct: 319 LGGNSCLSGDWMGNWKFDHKLQIGENIIFEDMLHYTTVKTNTFNGISHPAIALLHSNKDL 378

Query: 352 KAIREFSYNDYYNNL 366
           + +R +SY DY + +
Sbjct: 379 EILRTYSYEDYRDRM 393


>gi|121635635|ref|YP_975880.1| diaminopimelate decarboxylase [Neisseria meningitidis FAM18]
 gi|120867341|emb|CAM11112.1| diaminopimelate decarboxylase [Neisseria meningitidis FAM18]
 gi|325131386|gb|EGC54095.1| diaminopimelate decarboxylase [Neisseria meningitidis M6190]
 gi|325137467|gb|EGC60053.1| diaminopimelate decarboxylase [Neisseria meningitidis ES14902]
 gi|325204928|gb|ADZ00382.1| diaminopimelate decarboxylase [Neisseria meningitidis M01-240355]
          Length = 414

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 69/385 (17%), Positives = 128/385 (33%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L    +            +  A+K      +         G    S  E
Sbjct: 18  GTPLYVYSQSALTEAFEHYQTAFAELSPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77

Query: 63  VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G   +T    V   + EI+ A+ +        ++ ++++ +  A +L     
Sbjct: 78  LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAP 137

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D +E+           + G+  H   +  
Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLT 197

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
                    + I             +E + LGGG+    +D  V D   + Q +++    
Sbjct: 198 DLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDEDVPDLGAYAQAVQKLIGT 257

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++ LEPG ++V N  +L T V  +     KN V+VD+++   +   L          
Sbjct: 258 RRLKLILEPGRSLVGNAGSLLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317

Query: 284 NTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
            T      TA + G  C  GD  G+       + GD +       Y  +  + +N  N  
Sbjct: 318 ETKDIATLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNARNRA 376

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + N  G     R  +      N
Sbjct: 377 AEVLVNGGGYKLIRRRETLEQQMAN 401


>gi|319409711|emb|CBY90016.1| diaminopimelate decarboxylase (DAP decarboxylase) [Neisseria
           meningitidis WUE 2594]
          Length = 414

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 65/385 (16%), Positives = 127/385 (32%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L    +            +  A+K      +         G    S  E
Sbjct: 18  GTPLYVYSQSALTEAFENYQTAFAELSPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77

Query: 63  VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G   +T    V   + EI+ A+ +        ++ ++++ +  A +L     
Sbjct: 78  LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAP 137

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D +E+           + G+  H   +  
Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLT 197

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                    + I             +E + LGGG+    +D     +  + + +++    
Sbjct: 198 DLSPLIEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDENVPDLGAYARAVQKLMGT 257

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++ LEPG ++V N   L T V  +     KN V+VD+++   +   L          
Sbjct: 258 RRLKLILEPGRSLVGNAGALLTRVEFVKHGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317

Query: 284 NTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
            T    P TA + G  C  GD  G+       + GD +       Y  +  + +N  N  
Sbjct: 318 ETKNIAPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGSSMASNYNTRNRA 376

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + + +      R  +      N
Sbjct: 377 AEVLVDGNEYRLIRRRETLEQQMAN 401


>gi|148978918|ref|ZP_01815238.1| carboxynorspermidine decarboxylase [Vibrionales bacterium SWAT-3]
 gi|145962116|gb|EDK27402.1| carboxynorspermidine decarboxylase [Vibrionales bacterium SWAT-3]
          Length = 377

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 168/368 (45%), Positives = 241/368 (65%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPY++I++ KL+ NL+ A  +++ +GVKL+LALKCF+ WG+FD +  Y+DGTTSS  Y
Sbjct: 6   LKTPYFMINEDKLVANLEKAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LGHE FGGETHAY+V Y + ++  V   CD +IFN+ SQ   ++   +     +GLR
Sbjct: 66  EVRLGHETFGGETHAYSVGYSEDDVREVADICDKMIFNSQSQFEAYRHIVEGKA-SLGLR 124

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP VSY+   LA+P R FSRLG +           +NG+MFH NCENK    F  +L +
Sbjct: 125 LNPGVSYAGQDLANPARQFSRLGVQADHIKPEIFDEINGVMFHMNCENKDVDAFIGLLDS 184

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I ++FG  + +++W+S+GGG+ FT   Y ++     LK FSEK+ VQ+YLEPGEAI+T T
Sbjct: 185 ISEQFGEHLDKLDWVSMGGGVFFTWPGYDIEKLGLALKAFSEKHGVQMYLEPGEAIITKT 244

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299
           T L  TV+DI EN+K   IVDS+ EAH  D L+Y E A++      G +  ++   SCLA
Sbjct: 245 TDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPASVLEASENGSHDYVIGSCSCLA 304

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F E  F++P+KIG ++   D AGY + + NWFNG+ MP+I  +  +G ++ + EF Y
Sbjct: 305 GDQFCETSFDEPLKIGQKLHLLDSAGYTMVKLNWFNGLKMPSIYCERSNGEVQKLNEFGY 364

Query: 360 NDYYNNLS 367
            D+  +LS
Sbjct: 365 QDFKRSLS 372


>gi|218767449|ref|YP_002341961.1| diaminopimelate decarboxylase [Neisseria meningitidis Z2491]
 gi|13124075|sp|Q9JWA6|DCDA_NEIMA RecName: Full=Diaminopimelate decarboxylase; Short=DAP
           decarboxylase
 gi|121051457|emb|CAM07750.1| diaminopimelate decarboxylase [Neisseria meningitidis Z2491]
          Length = 406

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 67/385 (17%), Positives = 127/385 (32%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L    +            +  A+K      +         G    S  E
Sbjct: 18  GTPLYVYSQSALTEAFEHYQTAFAELSPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77

Query: 63  VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G   +T    V   + EI+ A+ +        ++ ++++ +  A +L     
Sbjct: 78  LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAS 137

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D +E+           + G+  H   +  
Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLT 197

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
                    + I             +E + LGGG+    +D  V D   + Q +++    
Sbjct: 198 DLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDEDVPDLGAYAQAVQKLIGT 257

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++ LEPG ++V N   L T V  +     KN V+VD+++   +   L          
Sbjct: 258 RRLKLILEPGRSLVGNAGALLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317

Query: 284 NTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                 P TA + G  C  GD  G+       + GD +       Y  +  + +N  N  
Sbjct: 318 EPKNIAPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNARNRA 376

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + + +      R  +      N
Sbjct: 377 AEVLVDGNEYRLIRRRETLEQQMAN 401


>gi|207721858|ref|YP_002252296.1| diaminopimelate decarboxylase protein [Ralstonia solanacearum
           MolK2]
 gi|206587025|emb|CAQ17609.1| diaminopimelate decarboxylase protein [Ralstonia solanacearum
           MolK2]
          Length = 407

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 58/387 (14%), Positives = 116/387 (29%), Gaps = 26/387 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  N        +    ++  A+K  +   +     Q   G    S  E
Sbjct: 15  GTPTYVYSRAALTANYRAYAAACEGRNARVQYAMKANSNLAVLQIFAQLGAGFDIVSGGE 74

Query: 63  VMLGHEKFGG--ETHAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G   +     V    D    A+ +        ++ +L++  + A  L     
Sbjct: 75  LRRVLAAGGKAADVVFSGVGKTADEMRLALEAGVACFNVESIPELHRLNEVAGSLGKTAP 134

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G   ++ +             V G+  H   +  
Sbjct: 135 VSLRVNPDVDAKTHPYISTGLKGNKFGVAFEEVLPTYRAAAAMPNLRVVGIDCHIGSQIT 194

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
               +   +    ++         ++  I +GGG+  T  D    D     +   ++   
Sbjct: 195 EVSPYLDAIDKVLDVVARLDAEGIRLSHIDVGGGLGITYTDETPPDITAFARTLLDRIEQ 254

Query: 228 Q------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280
           +      +  EPG ++V N   L T V  +         + D+++       +       
Sbjct: 255 RGFGDRTVLFEPGRSLVGNAGLLLTRVEFLKPGAAKNFCIVDAAMNDLARPAMYEAYHHI 314

Query: 281 IYPNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
           +             V G  C +GD  G       V+ GD ++      Y     + +N  
Sbjct: 315 VPVRERSGAATVYDVVGPVCESGDWLGRDRAL-DVQPGDLLAILSAGAYGFTMSSNYNTR 373

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
           N     + + D    A     + D   
Sbjct: 374 NRAAEVIVDGDRVHVARERERFEDLIR 400


>gi|148978773|ref|ZP_01815153.1| diaminopimelate decarboxylase [Vibrionales bacterium SWAT-3]
 gi|145962194|gb|EDK27478.1| diaminopimelate decarboxylase [Vibrionales bacterium SWAT-3]
          Length = 417

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 59/378 (15%), Positives = 113/378 (29%), Gaps = 24/378 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  + +            +  A+K  +  G+ +TL +   G    S  E
Sbjct: 27  GTPLYVYSRATLERHWNAFDSSVGEHPHLVCYAVKANSNLGVLNTLARLGSGFDIVSGGE 86

Query: 63  V-MLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +  +           ++   K       A+  N       +  +L +    A +L     
Sbjct: 87  LERVVAAGGDPAKVVFSGVGKTAAEMKRALELNIKCFNVESEPELERLNKVAGELGVKAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           I LRINP V  +           ++ G                    ++G+  H   +  
Sbjct: 147 ISLRINPDVDANTHPYISTGLRDNKFGIAFDRAPAVYAFAQTLENLSIHGIDCHIGSQLT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F         +  +       I+ + +GGG+           P       L     
Sbjct: 207 DIEPFIDATDRLLALIDQLRADGINIKHLDVGGGLGVVYRDELPPQPSDYAKALLARLEN 266

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279
              +++  EPG AI  N   L T V  +         I+D+++   +   L         
Sbjct: 267 HSDLELIFEPGRAIAANAGVLLTKVEFLKPTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            I       T  + G  C  GD  G+      ++ GD ++      Y     + +N  + 
Sbjct: 327 VIPRQGEAVTYDLVGPICETGDFLGKDRELV-LEEGDLLAVRSAGAYGFVMSSNYNTRSR 385

Query: 340 PTIAVKNVDGTIKAIREF 357
               + + + T    +  
Sbjct: 386 AAEVMVDGNKTHLVRQRE 403


>gi|189463104|ref|ZP_03011889.1| hypothetical protein BACCOP_03814 [Bacteroides coprocola DSM 17136]
 gi|189430083|gb|EDU99067.1| hypothetical protein BACCOP_03814 [Bacteroides coprocola DSM 17136]
          Length = 374

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 121/374 (32%), Positives = 188/374 (50%), Gaps = 17/374 (4%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE 68
           +++  L  NL     + + AGV+++LA K FA W  F    +Y+  TT+SS YE  L  E
Sbjct: 1   MEEDLLRKNLSLIKSVAERAGVEIILAFKAFAMWKSFPIFREYIHYTTASSEYEARLAFE 60

Query: 69  KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIGLRINPSV 126
           +FG + H Y+ AY +    A L     I FN++SQ  +F    KA   H   G+R+NP  
Sbjct: 61  EFGSKAHTYSPAYTETNFPAFLKYSSHITFNSLSQFERFYPQAKAYPEHVSCGIRVNPEY 120

Query: 127 SYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF 186
           S  +  L +P  P +R G       +   + + G   H +CE+ S+      LK+IE++F
Sbjct: 121 SEVEVELYNPCAPGTRFGVTADLLPDRLPEGIEGFHCHCHCESSSYE-LERTLKHIEEKF 179

Query: 187 GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNTTTLN 245
             +  Q++W++LGGG   T KDY V+     LK   E+Y   QI LEPG A    T  L 
Sbjct: 180 SRWFPQLKWLNLGGGHLMTRKDYDVEHLIGLLKGLRERYPNLQIILEPGSAFTWQTGPLV 239

Query: 246 TTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTG------------PYTAMV 292
            +V+D+ E+      + D S   H+PD L       +                  +   +
Sbjct: 240 ASVVDVVESRGIRTAILDVSFTCHMPDCLEMPYQPKVRNAETLPPDAVKTAAREDHVYRL 299

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352
            G SCL+GD  G + F+  ++IG+RI FED+  Y + + N FNGI+ P++A+ + DG ++
Sbjct: 300 GGNSCLSGDYMGSWKFDHELQIGERIIFEDMIHYTMVKTNMFNGIHHPSVALLHTDGELE 359

Query: 353 AIREFSYNDYYNNL 366
             + F Y DY + +
Sbjct: 360 VYKTFRYEDYRDRM 373


>gi|288941801|ref|YP_003444041.1| diaminopimelate decarboxylase [Allochromatium vinosum DSM 180]
 gi|288897173|gb|ADC63009.1| diaminopimelate decarboxylase [Allochromatium vinosum DSM 180]
          Length = 423

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 61/385 (15%), Positives = 117/385 (30%), Gaps = 24/385 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +        ++    +  ++K  +   + + L +   G    S+ E
Sbjct: 26  GTPCYVYSRATLERHWRAFERAFRDHPHLICFSVKSNSNLAVLNVLARLGSGFDIVSVGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++   K  D    A+          + S+L +    A +L     
Sbjct: 86  LERVLAAGGDPARVVFSGVGKRADEIRRALEVGIRCFNVESESELTRIDRIAGELGVRAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G   ++               V G+  H   +  
Sbjct: 146 VSLRVNPDVDPQTHHYISTGLKENKFGIDIQEAESVYALAAAMPNLKVVGIDCHIGSQLT 205

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYP---VKDFCQRLKEFSEK 224
               F   L  +             IE + LGGG+    ++        +   +      
Sbjct: 206 DLAPFIDALGRVLALADRLCASGIAIEHLDLGGGLGIRYREEHPPEPAAYAAAMSHLLAD 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
              ++ LEPG AIV N   L T V  +     K+  I+D+++   +   L       +  
Sbjct: 266 RPYEVILEPGRAIVGNAGVLLTQVEYLKHGPHKHFAILDAAMNDLLRPALYQAGHEIVRV 325

Query: 284 NTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                  P    + G  C  GD  G+      ++ GD ++      Y     + +N    
Sbjct: 326 VQETDADPSRYDLVGPVCETGDFLGKDRTLA-LEEGDLVAVRGAGAYGFTMSSNYNSRPR 384

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
               + + D            D Y 
Sbjct: 385 AAEVMVDGDRAYLVRAREQVADLYA 409


>gi|224373130|ref|YP_002607502.1| diaminopimelate decarboxylase [Nautilia profundicola AmH]
 gi|223589760|gb|ACM93496.1| diaminopimelate decarboxylase [Nautilia profundicola AmH]
          Length = 400

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 65/384 (16%), Positives = 114/384 (29%), Gaps = 22/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D     N  +      K     +  A+K  +   +         G    S+ E
Sbjct: 11  GTPLYVYDFHHFENQFNELKNAFKGRKSIISYAVKANSNLSVIKKFATLGSGADCVSIGE 70

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
           V              ++   K  +        D   I   + ++LN+  D A+KL     
Sbjct: 71  VKRALMAGVDRYKVIFSGVGKRDDEIEEALKLDILMINVESEAELNRVADIAEKLGVVAR 130

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           +  R+NP++              ++ G       +  +        N  G+ FH   +  
Sbjct: 131 ISIRVNPNIDPKTHPYISTGLHENKFGVDIDTAKKMYLFAKNNSSLNPVGIHFHIGSQLT 190

Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP---VKDFCQRLKEFSEK 224
                     ++ ++ +        I++  +GGG+    KD       D+ Q +      
Sbjct: 191 ELEPIKEASQIVADLVRSLKAINIDIKFFDVGGGLGIKYKDEETIKPYDYAQAILSTLSG 250

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             V I  EPG  +V N     T+VL       K  VIVD ++   +   L          
Sbjct: 251 LDVTIVCEPGRFLVGNGGWFLTSVLYEKVNGDKRFVIVDGAMNDLIRPSLYNAYHKIEVI 310

Query: 284 NTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                    A + G  C +GD F +         GD +       Y     + +N     
Sbjct: 311 TDKNGEISKANLVGPICESGDFFAKDIELPSTNHGDLVVIHSAGAYGFTMSSNYNTRPRA 370

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
                         R  ++ D   
Sbjct: 371 AEIAVENGEDRIIRRRETFEDLIA 394


>gi|239827592|ref|YP_002950216.1| diaminopimelate decarboxylase [Geobacillus sp. WCH70]
 gi|239807885|gb|ACS24950.1| diaminopimelate decarboxylase [Geobacillus sp. WCH70]
          Length = 439

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 59/399 (14%), Positives = 124/399 (31%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   +           +  GVK  +  A K F++  M     +        S 
Sbjct: 30  GTPLYIYDVALIRERARGFKEAFQKHGVKAQVAYASKAFSSIAMVQLAEEEGLSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F  E   ++     +D  + A+ +    I+ +   +L   +  +      
Sbjct: 90  GELYTALQAGFPPERIHFHGNNKSRDELMMALENGVGCIVVDNFYELELLEQLSKQYGKK 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I LR+ P V           +  S+ G         E  +  + S   +V G+  H  
Sbjct: 150 TAILLRVTPGVEAHTHDYILTGQEDSKFGFDLNNGQADEALQKALSSLSFSVLGIHCHIG 209

Query: 167 CEN----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK--------DF 214
            +        L    + + I      +      ++LGGG                     
Sbjct: 210 SQIFETTGFVLAAQKIFQKIAHWKETYGFIPTVVNLGGGFGIRYTSDDDPIPVSEYVDQI 269

Query: 215 CQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            + +K+ + + ++ +   ++EPG ++V +  T   ++    +       V     +  ++
Sbjct: 270 VEEVKKQASEKNIPMPEIWIEPGRSLVGDAGTTIYSIGSRKDVPNVRHYVAVDGGMSDNI 329

Query: 270 PDYLLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   +  N           + G+ C +GD+            GD ++      
Sbjct: 330 RPALYDAKYEAVLANRVLDEKNEIVAIAGKCCESGDMLIWDLPLPKASPGDYLAVFCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  N +N I  P +           ++  +Y D   
Sbjct: 390 YGYSMANNYNRIPRPAVVFVENGEAQLVVKRETYEDLVR 428


>gi|37196770|dbj|BAC92756.1| diaminopimelate decarboxylase [Methylophilus methylotrophus]
          Length = 414

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 66/384 (17%), Positives = 124/384 (32%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP Y+  +  L    +            +  A+K   +  + +   +   G    S  E
Sbjct: 26  QTPTYVYSRAALTTAFERFQAGLTGHDHLICFAVKANPSLAILNLFARMGAGFDIVSGGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +          +   ++   K       A+ +        +V++L++ +  A  L     
Sbjct: 86  LARVLAAGGDPKKVVFSGVGKSHAEIKAALEAGILCFNVESVNELDRIQQVAASLGKKAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP+V              ++ G   +D +             V+G+  H   +  
Sbjct: 146 ISLRVNPNVDAKTHPYISTGLKNNKFGVAFEDALGLYEKAAQLPNIEVHGVDCHIGSQIT 205

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--- 224
               F   L  +             I+ I +GGG+  T  D    DF        +K   
Sbjct: 206 ELSPFLDALDKVLGLVDALAAKGIHIQHIDVGGGVGITYSDETPPDFAAYTAAILKKLAG 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
            +V++  EPG A+V N   L T V  +     KN  IVD+++   +   L          
Sbjct: 266 RNVKVLFEPGRALVGNAGVLLTKVEYLKPGETKNFAIVDAAMNDLMRPALYDAFHNITTI 325

Query: 284 NTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
            T         + G  C +GD  G       ++ GD ++      Y ++  + +N     
Sbjct: 326 ATSAAPAQIYEIVGPVCESGDFLGHDRTLA-IEEGDYLAIHSAGAYGMSMASNYNTRARA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + + D            D + 
Sbjct: 385 AEVLVDGDQVHVIREREQIADLFK 408


>gi|262274406|ref|ZP_06052217.1| carboxynorspermidine decarboxylase putative [Grimontia hollisae CIP
           101886]
 gi|262220969|gb|EEY72283.1| carboxynorspermidine decarboxylase putative [Grimontia hollisae CIP
           101886]
          Length = 380

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 171/368 (46%), Positives = 242/368 (65%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPY+LI++ KL+ NL+ A  +++ +GVKL+LALKCF+ WG+FD +  Y+DGTTSS  +
Sbjct: 6   LKTPYFLIEEDKLIENLEKAKRLKELSGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG+E FGGETHAY+V Y + ++  V   CD +IFN+ SQL  ++   +     IGLR
Sbjct: 66  EVKLGYETFGGETHAYSVGYSEDDVRDVADICDKMIFNSQSQLTAYRHLVEGKAS-IGLR 124

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP VSY+   LA+P R FSRLG             +NG+MFH NCENK    F+++L  
Sbjct: 125 LNPGVSYAGQDLANPARRFSRLGVHFDQIDPGIFATLNGVMFHMNCENKDVDAFTSLLDA 184

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I ++FG ++ Q+EW+SLGGG+ FT   Y ++     LK F E++ VQ+YLEPGEAI+T T
Sbjct: 185 ISEKFGSYLNQLEWVSLGGGVFFTWPGYDLEKLAAALKAFGERHGVQLYLEPGEAIITKT 244

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY--PNTGPYTAMVCGRSCLA 299
           T L  TV+DI EN     IVDS+ EAH  D L+Y E A+I    +TG +T ++   SCLA
Sbjct: 245 TDLVVTVVDIVENEVKTAIVDSATEAHRLDTLIYNEPASIAEANDTGEHTYVIGSCSCLA 304

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F   +F+ P+K+G R+   D AGY + + NWFNG+ MP++  +  +G I+ + EF Y
Sbjct: 305 GDQFCVANFDHPLKVGQRLHIMDSAGYTMVKLNWFNGLRMPSVYCRRSNGKIQLLNEFDY 364

Query: 360 NDYYNNLS 367
            D+  +LS
Sbjct: 365 QDFKRSLS 372


>gi|223038682|ref|ZP_03608975.1| diaminopimelate decarboxylase [Campylobacter rectus RM3267]
 gi|222880084|gb|EEF15172.1| diaminopimelate decarboxylase [Campylobacter rectus RM3267]
          Length = 413

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 67/397 (16%), Positives = 119/397 (29%), Gaps = 36/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D   + +  +            +  A+K  +   +   L     G    S+ E
Sbjct: 11  GTPLYIYDFDYMAHRYEALKNAFHARKSLVCYAVKANSNLSVLKFLAGLGAGFDCVSVGE 70

Query: 63  VMLGHEKFGG--ETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIG 119
           V           +     V  +D E+   L N    I   + +++N+ +  A++L K   
Sbjct: 71  VRRALLAGAKSYQIILSGVGKRDDELKFALENEILMINLESEAEMNRLESIAKQLDKPAR 130

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENK 170
           +  R+NP +              ++ G   +           S      G+  H   +  
Sbjct: 131 ISIRVNPDIDAKTHPYISTGLNENKFGVDPQTAKKMYLHAKNSPYLEPVGIHSHIGSQLT 190

Query: 171 SFLCFSAMLKNIEKEFGHFI---TQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                    K +             I++  +GGG+     D     + ++ Q +      
Sbjct: 191 DVWPLIEAAKTVANLTRELKAVQIDIKFFDVGGGLGIIYGDESEPDLYEYAQGILANLSG 250

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             V +  EPG  I  N     T+VL       K  VIVD ++   +    LYQ    I+ 
Sbjct: 251 LDVTVVCEPGRFIAGNAGYFLTSVLYEKFNKDKRFVIVDGAMNDLIRPS-LYQARHKIFA 309

Query: 284 NTGPY----------------TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
            +G                     V G  C +GD   +     P+  GD +  +    Y 
Sbjct: 310 LSGGEIFDECKKEQLKELKFSPCDVVGPICESGDFLAKDRNLPPLNPGDLVVIKSAGAYG 369

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
               + +N                   R  S+ D   
Sbjct: 370 FAMSSNYNTRGRVAEVAVKGGEDFLIRRRESFEDIVA 406


>gi|240013231|ref|ZP_04720144.1| hypothetical protein NgonD_01030 [Neisseria gonorrhoeae DGI18]
 gi|240015677|ref|ZP_04722217.1| hypothetical protein NgonFA_00668 [Neisseria gonorrhoeae FA6140]
 gi|240120302|ref|ZP_04733264.1| hypothetical protein NgonPI_00705 [Neisseria gonorrhoeae PID24-1]
          Length = 406

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 67/385 (17%), Positives = 127/385 (32%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L    +            +  A+K      +         G    S  E
Sbjct: 18  GTPLYVYSQSALTGAFENYQTAFAALNPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77

Query: 63  VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G   +T    V   + EI+ A+ +        ++ ++++ +  A +L     
Sbjct: 78  LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKIAARLGKTAP 137

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D +E+           + G+  H   +  
Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLT 197

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                    + I             +E + LGGG+    KD     +  + + +++    
Sbjct: 198 DLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYKDEGVPDLGAYARAVQKLMGT 257

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++ LEPG ++V N   L T V  +     KN V+VD+++   +   L          
Sbjct: 258 RRLKLILEPGRSLVGNAGALLTRVEFVKHGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317

Query: 284 NTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
            T    P TA + G  C  GD  G+       + GD +       Y  +  + +N  N  
Sbjct: 318 ETKNIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNTRNRA 376

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + +  G     R  +      N
Sbjct: 377 AEVLVDGGGYKLIRRRETLEQQMAN 401


>gi|59802399|ref|YP_209111.1| hypothetical protein NGO2098 [Neisseria gonorrhoeae FA 1090]
 gi|239998049|ref|ZP_04717973.1| hypothetical protein Ngon3_00993 [Neisseria gonorrhoeae 35/02]
 gi|240079813|ref|ZP_04724356.1| hypothetical protein NgonF_00641 [Neisseria gonorrhoeae FA19]
 gi|240114768|ref|ZP_04728830.1| hypothetical protein NgonPID1_00673 [Neisseria gonorrhoeae PID18]
 gi|240116968|ref|ZP_04731030.1| hypothetical protein NgonPID_00658 [Neisseria gonorrhoeae PID1]
 gi|240122606|ref|ZP_04735562.1| hypothetical protein NgonP_01441 [Neisseria gonorrhoeae PID332]
 gi|240124794|ref|ZP_04737680.1| hypothetical protein NgonSK_00970 [Neisseria gonorrhoeae SK-92-679]
 gi|240127312|ref|ZP_04739973.1| hypothetical protein NgonS_01425 [Neisseria gonorrhoeae SK-93-1035]
 gi|260441419|ref|ZP_05795235.1| hypothetical protein NgonDG_10117 [Neisseria gonorrhoeae DGI2]
 gi|268593898|ref|ZP_06128065.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae 35/02]
 gi|268595955|ref|ZP_06130122.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae FA19]
 gi|268600416|ref|ZP_06134583.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae PID18]
 gi|268602648|ref|ZP_06136815.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae PID1]
 gi|268681197|ref|ZP_06148059.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae PID332]
 gi|268683367|ref|ZP_06150229.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae SK-92-679]
 gi|268685676|ref|ZP_06152538.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae SK-93-1035]
 gi|291044781|ref|ZP_06570490.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae DGI2]
 gi|293397871|ref|ZP_06642077.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae F62]
 gi|59719294|gb|AAW90699.1| putative diaminopimelate decarboxylase [Neisseria gonorrhoeae FA
           1090]
 gi|268547287|gb|EEZ42705.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae 35/02]
 gi|268549743|gb|EEZ44762.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae FA19]
 gi|268584547|gb|EEZ49223.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae PID18]
 gi|268586779|gb|EEZ51455.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae PID1]
 gi|268621481|gb|EEZ53881.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae PID332]
 gi|268623651|gb|EEZ56051.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae SK-92-679]
 gi|268625960|gb|EEZ58360.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae SK-93-1035]
 gi|291011675|gb|EFE03671.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae DGI2]
 gi|291611817|gb|EFF40886.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae F62]
 gi|317165492|gb|ADV09033.1| hypothetical protein NGTW08_2082 [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 406

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 67/385 (17%), Positives = 127/385 (32%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L    +            +  A+K      +         G    S  E
Sbjct: 18  GTPLYVYSQSALTGAFENYQTAFAALNPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77

Query: 63  VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G   +T    V   + EI+ A+ +        ++ ++++ +  A +L     
Sbjct: 78  LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKIAARLGKTAP 137

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D +E+           + G+  H   +  
Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLT 197

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                    + I             +E + LGGG+    KD     +  + + +++    
Sbjct: 198 DLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYKDEGVPDLGAYARAVQKLMGT 257

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++ LEPG ++V N   L T V  +     KN V+VD+++   +   L          
Sbjct: 258 RRLKLILEPGRSLVGNAGALLTRVEFVKHGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317

Query: 284 NTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
            T    P TA + G  C  GD  G+       + GD +       Y  +  + +N  N  
Sbjct: 318 ETKNIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNTRNRA 376

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + +  G     R  +      N
Sbjct: 377 AEVLVDGGGYKLIRRRETLEQQMAN 401


>gi|258621933|ref|ZP_05716963.1| carboxynorspermidine decarboxylase [Vibrio mimicus VM573]
 gi|258585871|gb|EEW10590.1| carboxynorspermidine decarboxylase [Vibrio mimicus VM573]
          Length = 377

 Score =  240 bits (612), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 166/368 (45%), Positives = 244/368 (66%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPY++ID+ KL+ NL+ A ++++ +GVK++LALKCF+ WG+FD +  Y+DGTTSS  +
Sbjct: 6   LKTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG+E FGGETHAY+V Y + ++  V+  CD +IFN+ SQL  ++   +     +GLR
Sbjct: 66  EVKLGYETFGGETHAYSVGYSEDDVKEVVDICDKMIFNSQSQLAAYRHLVEGKA-SLGLR 124

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP VSY+   LA+P R FSRLG +     ES  + ++G+MFH NCENK    F ++L  
Sbjct: 125 INPGVSYAGQDLANPARKFSRLGVQADHIDESVFETIDGVMFHMNCENKDVDAFISLLDA 184

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I + FG ++ +++W+SLGGG+ FT   Y V      LK FSE++ VQ+YLEPGEA++T T
Sbjct: 185 ISERFGRYLDKLDWVSLGGGVFFTWPGYDVDKLGVALKAFSERHGVQLYLEPGEAVITKT 244

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299
           T L  TV+DI EN     IVDS+ EAH  D L+Y+E A++    + G +  ++   SCLA
Sbjct: 245 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASDNGQHEYVIGSCSCLA 304

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F    F++P+K+G ++   D AGY + + NWFNG+ MP++  +  +G I+ I +F Y
Sbjct: 305 GDQFCVAKFDEPLKVGQKLHILDSAGYTMVKLNWFNGLKMPSVYCERQNGEIQKINQFGY 364

Query: 360 NDYYNNLS 367
            D+   LS
Sbjct: 365 EDFKRTLS 372


>gi|313669199|ref|YP_004049483.1| diaminopimelate decarboxylase [Neisseria lactamica ST-640]
 gi|313006661|emb|CBN88127.1| diaminopimelate decarboxylase [Neisseria lactamica 020-06]
          Length = 406

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 66/385 (17%), Positives = 127/385 (32%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L    +            +  A+K      +         G    S  E
Sbjct: 18  GTPLYVYSQSALTEAFEHYQTAFAALNPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77

Query: 63  VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G   +T    V   + EI+ A+ +        ++ ++++ +  A +L     
Sbjct: 78  LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAS 137

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D +E+           + G+  H   +  
Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLT 197

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                    + I             +E + LGGG+    +D     +  + Q +++    
Sbjct: 198 DLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYRDENVPDLGAYAQAVQKLIGT 257

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++ LEPG ++V N  +L T V  +     KN V+VD+++   +   L          
Sbjct: 258 RRLKLILEPGRSLVGNAGSLLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIESV 317

Query: 284 NTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
            T      TA + G  C  GD  G+       + GD +       Y  +  + +N  N  
Sbjct: 318 ETKDIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNARNRA 376

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + +  G     R  +      N
Sbjct: 377 AEVLVDGSGYKLIRRRETLEQQMAN 401


>gi|261378590|ref|ZP_05983163.1| diaminopimelate decarboxylase [Neisseria cinerea ATCC 14685]
 gi|269144922|gb|EEZ71340.1| diaminopimelate decarboxylase [Neisseria cinerea ATCC 14685]
          Length = 406

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 68/385 (17%), Positives = 128/385 (33%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L    +            +  A+K      +         G    S  E
Sbjct: 18  GTPLYVYSQSALTEAFEHYQTAFAELSPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77

Query: 63  VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +       G   +T    V   + EI+ A+ +        ++ ++++ +  A +L K   
Sbjct: 78  LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLSKTAP 137

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D +E+           + G+  H   +  
Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLT 197

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                    + I             +E + LGGG+    +D     +  + Q +++    
Sbjct: 198 DLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDEHVPDLGAYAQAVQKLIGT 257

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++ LEPG ++V N  +L T V  +     KN V+VD+++   +   L          
Sbjct: 258 RRLKLILEPGRSLVGNAGSLLTRVEFVKHGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317

Query: 284 NTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
            T      TA + G  C  GD  G+       + GD +       Y  +  + +N  N  
Sbjct: 318 ETKDIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNARNRA 376

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + N  G     R  +      N
Sbjct: 377 AEVLVNGGGYKLIRRRETLEQQMAN 401


>gi|254454697|ref|ZP_05068134.1| diaminopimelate decarboxylase [Octadecabacter antarcticus 238]
 gi|198269103|gb|EDY93373.1| diaminopimelate decarboxylase [Octadecabacter antarcticus 238]
          Length = 421

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 59/390 (15%), Positives = 116/390 (29%), Gaps = 26/390 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+     LL +              +  A+K  +   +   L     G    S  
Sbjct: 25  VGTPFYVYSTATLLRHFKLFDDALSGMDHLVCFAVKSLSNVAVLKLLGDAGAGMDVVSGG 84

Query: 62  EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E +        G+   ++     ++    A+          +  ++      A  L+   
Sbjct: 85  EYLRAKAAGVSGDKIVFSGIGKTREEMRLALEGGIRQFNVESEPEMEALSQVALSLNTVA 144

Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            +  R+NP V           +   + G       E            V G+  H   + 
Sbjct: 145 PITVRVNPDVDAKTHAKISTGKKEDKFGIPISRAREVYAMAAKLPGLKVIGIDVHIGSQL 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPV-----KDFCQRLKEF 221
                F    + + +   +       I  + LGGG+              +++   +KE 
Sbjct: 205 TELEPFRLAYRKVAELTEQLRSDGHDITRLDLGGGLGIPYARDNNAPPLPREYGALIKEE 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                 +I +EPG  I  N   L   V+ +     +  +IVD+++   V   +       
Sbjct: 265 VGHLGCEIEIEPGRLISGNAGLLVAKVIYVKSGEDREFLIVDAAMNDLVRPAMYDAWHDI 324

Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +               V G  C +GD F +     P+     + F     Y+    + +N
Sbjct: 325 VPVIEPAAGVDQTPYDVVGPICESGDTFAKGRMLPPLDPEALVGFRSAGAYSAVMSSEYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              +    + N D      R  ++ D  N 
Sbjct: 385 SRPLIPEVLVNGDQFAVIRRRPTFEDMINR 414


>gi|315637685|ref|ZP_07892890.1| carboxynorspermidine decarboxylase [Arcobacter butzleri JV22]
 gi|315478032|gb|EFU68760.1| carboxynorspermidine decarboxylase [Arcobacter butzleri JV22]
          Length = 382

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 143/371 (38%), Positives = 218/371 (58%), Gaps = 7/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P Y+ +++ L  NL     ++  A + +LLALK FA    FD   +Y+ G  +S L+
Sbjct: 14  LPSPAYVCEEELLEKNLKLLKRVQDEADISILLALKGFAMHSTFDLCKKYLKGCCASGLH 73

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E +L  E+FGGE H Y+ A+KD EID +++  + ++FN+ SQL +FKDKA      +G+R
Sbjct: 74  EAILAKEEFGGEVHTYSPAFKDEEIDEIVAISNHLVFNSFSQLKRFKDKAYGKVS-LGIR 132

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP  S  +  L +P  P+SR+G    +  ES+++ ++G  FH  CE          LK 
Sbjct: 133 LNPEYSSVEVDLYNPCAPYSRMGITKANFDESQLQFLDGFHFHALCEQN-VDALEGALKA 191

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240
            EK F  +  +++W++ GGG H T  DY V+   + LK+F  +Y   ++Y+EPGEAI   
Sbjct: 192 FEKNFSQYFDRLKWVNFGGGHHITRADYDVEGLIKLLKDFKSRYPHLKVYMEPGEAIGWQ 251

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296
           T  L  TVLDI  N  +L I+D+S EAH+PD L     A I      N  PYT    G +
Sbjct: 252 TGYLVATVLDIVHNGMDLAILDTSAEAHMPDTLAMPYRAMIRNSGLANEKPYTYRFGGNT 311

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CL+GDI G++ F++P+K+GD+I  ED+  Y + +   FNGI +P+I +KN + + K ++ 
Sbjct: 312 CLSGDIIGDYSFDEPLKVGDKIILEDMIHYTMVKTTTFNGIKLPSIVIKNKENSYKIVKN 371

Query: 357 FSYNDYYNNLS 367
           F YNDY   LS
Sbjct: 372 FGYNDYKMRLS 382


>gi|325206881|gb|ADZ02334.1| diaminopimelate decarboxylase [Neisseria meningitidis M04-240196]
          Length = 406

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 68/385 (17%), Positives = 129/385 (33%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L    +            +  A+K      +         G    S  E
Sbjct: 18  GTPLYVYSQSALTEAFEHYQTAFAELSPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77

Query: 63  VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           ++      G   +T    V   + EI+ A+ +        ++ ++++ +  A +L     
Sbjct: 78  LVRVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAP 137

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LRINP V              ++ G    D +E+           + G+  H   +  
Sbjct: 138 VSLRINPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLT 197

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                    + I             +E + LGGG+    KD     +  + Q +++    
Sbjct: 198 DLSPLIEACERILILVDALAAEGIVLEHLDLGGGVGIVYKDESVPDLGAYAQAVQKLIGT 257

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++ LEPG ++V N  +L T V  +     KN V+VD+++   +   L          
Sbjct: 258 RRLKLILEPGRSLVGNAGSLLTRVEFVKHGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317

Query: 284 NTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
            T    P TA + G  C  GD  G+       + GD +       Y  +  + +N  N  
Sbjct: 318 ETKNISPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNARNRA 376

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + + +      R  +      N
Sbjct: 377 AEVLVDGNEYRLIRRRETLEQQMAN 401


>gi|154147876|ref|YP_001406852.1| diaminopimelate decarboxylase [Campylobacter hominis ATCC BAA-381]
 gi|153803885|gb|ABS50892.1| diaminopimelate decarboxylase [Campylobacter hominis ATCC BAA-381]
          Length = 412

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 58/396 (14%), Positives = 117/396 (29%), Gaps = 34/396 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D   + +               +  A+K  +   +   L     G    S+ E
Sbjct: 11  GTPLYIYDFDYIKSRYLALKNAFSARKSLVCFAVKANSNLSVLKFLANLGSGFDCVSIGE 70

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           V              ++      +   +A+ +N   I   + +++ + ++ A++L K+  
Sbjct: 71  VRRALLAGANAYKIIFSGVGKKDEELKEALQNNILMINLESPAEMLRLENIAKELKKQAR 130

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           +  R+NP+V              ++ G +  +  +              G+ FH   +  
Sbjct: 131 ISIRVNPNVDAKTHPYISTGLNENKFGVEISEAKKMYLYAKKSEWLQPYGIHFHIGSQLT 190

Query: 171 SFLCFSAMLKNIEKEFGHFI---TQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224
                      +             I++  +GGGI    ++       D+ Q +    + 
Sbjct: 191 ELAPIIEAANIVSNIMSELKALEIDIKFFDVGGGIGVIYENENEISLYDYAQGILGALKG 250

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             V +  EPG  +  N     T VL     + K  VIVD ++   +   L          
Sbjct: 251 QDVTVICEPGRFLTANAGVFLTKVLYQKLNSKKRFVIVDGAMNDLIRPSLYNAHHGISVV 310

Query: 284 NTGP---------------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
           +                    A V G  C + D   +      +K GD +  +    Y  
Sbjct: 311 SKQNGEISNENSVQNLNEISKADVVGPICESSDFLAKNVDLPELKNGDLLLVKSAGAYGF 370

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +  + +N                   R  S+     
Sbjct: 371 SMSSNYNSRLRCAEVALENGTDRLIRRRESFEYLIA 406


>gi|325133435|gb|EGC56099.1| diaminopimelate decarboxylase [Neisseria meningitidis M13399]
          Length = 406

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 64/385 (16%), Positives = 127/385 (32%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L    +            +  A+K      +         G    S  E
Sbjct: 18  GTPLYVYSQSALTEAFEHYQTAFAELSPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77

Query: 63  VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G   +T    V   + EI+ A+ +        ++ ++++ +  A +L     
Sbjct: 78  LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAS 137

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D +++           + G+  H   +  
Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALKAYRHVAQQPNLKIIGIDCHIGSQLT 197

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                    + I     +       +E + LGGG+    +D     +  + Q +++    
Sbjct: 198 DLSPLVEACERILVLVDQLADEGIVLEHLDLGGGVGIVYQDENVPDLGAYAQAVQKLIGT 257

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++ LEPG ++V N   L T V  +     KN V+VD+++   +   L          
Sbjct: 258 RRLKLILEPGRSLVGNAGALLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317

Query: 284 NTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                 P TA + G  C  GD  G+       + GD +       Y  +  + +N  N  
Sbjct: 318 EPKNIAPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNARNRA 376

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + + +      R  +      N
Sbjct: 377 AEVLVDGNEYRLIRRRETLEQQMAN 401


>gi|78357021|ref|YP_388470.1| diaminopimelate decarboxylase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78219426|gb|ABB38775.1| diaminopimelate decarboxylase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 415

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 62/384 (16%), Positives = 114/384 (29%), Gaps = 22/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  K     +                 ++K  +   +   L +   G    S  E
Sbjct: 26  GTPLYIYSKATFQRHFTAFDSAFGALPHLTCYSVKACSNMHILRFLGKMGAGMDIVSGGE 85

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117
           +              Y+   K       A+ +        ++ +L K  + A +      
Sbjct: 86  LFRALRAGIQPAKIVYSGVGKTRTEILQALEAGILMFNVESMGELEKISEVANQTGHTAN 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCENK 170
           + LRINP V              ++ G   +    + ++ +        G+  H   +  
Sbjct: 146 VALRINPDVDPHTHPYISTGLKENKFGLDMEQSYAAYMRAMELPAITPMGIDCHIGSQLT 205

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
           S   F   ++      ++       I++I LGGG+              F + L +    
Sbjct: 206 SLSPFREAVEKILLFREKLCSAGLCIDYIDLGGGLGIPYDTEEPPHPQEFGKLLTDMLSG 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIY- 282
             + + LEPG  I  N   L T V    +   K  VIVD+++   +   L          
Sbjct: 266 LGITLILEPGRVIAGNAGILVTKVQYTKKTATKEFVIVDAAMNDLIRPSLYQSHHHIAEV 325

Query: 283 --PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                  +T  V G  C +GD          V+  + ++      Y     + +N     
Sbjct: 326 SPRGRAKHTVDVVGPICESGDFLARDRLMPAVEPRELLAVFSAGAYGFTMSSQYNSRPRA 385

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              +   D      R  +Y D   
Sbjct: 386 AEVLVRGDTAHLIRRRETYEDLIA 409


>gi|207744536|ref|YP_002260928.1| diaminopimelate decarboxylase protein [Ralstonia solanacearum
           IPO1609]
 gi|206595942|emb|CAQ62869.1| diaminopimelate decarboxylase protein [Ralstonia solanacearum
           IPO1609]
          Length = 407

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 58/387 (14%), Positives = 115/387 (29%), Gaps = 26/387 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  N        +    ++  A+K  +   +     Q   G    S  E
Sbjct: 15  GTPTYVYSRAALTANYRAYAAACEGRNARVQYAMKANSNLAVLQIFAQLGAGFDIVSGGE 74

Query: 63  VMLGHEKFGG--ETHAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G   +     V    D    A+ +        ++ +L++  + A  L     
Sbjct: 75  LRRVLAAGGKAADVVFSGVGKTADEMRLALEAGVACFNVESIPELHRLNEVAGSLGKTAP 134

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G   ++ +             V G+  H   +  
Sbjct: 135 VSLRVNPDVDAKTHPYISTGLKGNKFGVAFEEVLPTYRAAAAMPNLRVVGIDCHIGSQIT 194

Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
               +   +  +            ++  I +GGG+  T  D    D     +   ++   
Sbjct: 195 EVSPYLDAIDKVLDVVARLDGEGIRLSHIDVGGGLGITYTDETPPDITAFARTLLDRIEQ 254

Query: 228 Q------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280
           +      +  EPG ++V N   L T V  +         + D+++       +       
Sbjct: 255 RGFGDRTVLFEPGRSLVGNAGLLLTRVEFLKPGAAKNFCIVDAAMNDLARPAMYEAYHHI 314

Query: 281 IYPNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
           +             V G  C +GD  G       V+ GD ++      Y     + +N  
Sbjct: 315 VPVRERSGAATVYDVVGPVCESGDWLGRDRAL-DVQPGDLLAILSAGAYGFTMSSNYNTR 373

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
           N     + + D    A     + D   
Sbjct: 374 NRAAEVIVDGDRVHVARERERFEDLIR 400


>gi|83748189|ref|ZP_00945216.1| Diaminopimelate decarboxylase [Ralstonia solanacearum UW551]
 gi|83725157|gb|EAP72308.1| Diaminopimelate decarboxylase [Ralstonia solanacearum UW551]
          Length = 419

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 58/387 (14%), Positives = 115/387 (29%), Gaps = 26/387 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  N        +    ++  A+K  +   +     Q   G    S  E
Sbjct: 27  GTPTYVYSRAALTANYRAYAAACEGRNARVQYAMKANSNLAVLQIFAQLGAGFDIVSGGE 86

Query: 63  VMLGHEKFGG--ETHAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G   +     V    D    A+ +        ++ +L++  + A  L     
Sbjct: 87  LRRVLAAGGKAADVVFSGVGKTADEMRLALEAGVACFNVESIPELHRLNEVAGSLGKTAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G   ++ +             V G+  H   +  
Sbjct: 147 VSLRVNPDVDAKTHPYISTGLKGNKFGVAFEEVLPTYRAAAAMPNLRVVGIDCHIGSQIT 206

Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
               +   +  +            ++  I +GGG+  T  D    D     +   ++   
Sbjct: 207 EVSPYLDAIDKVLDVVARLDGEGIRLSHIDVGGGLGITYTDETPPDITAFARTLLDRIEQ 266

Query: 228 Q------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280
           +      +  EPG ++V N   L T V  +         + D+++       +       
Sbjct: 267 RGFGDRTVLFEPGRSLVGNAGLLLTRVEFLKPGAAKNFCIVDAAMNDLARPAMYEAYHHI 326

Query: 281 IYPNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
           +             V G  C +GD  G       V+ GD ++      Y     + +N  
Sbjct: 327 VPVRERSGAATVYDVVGPVCESGDWLGRDRAL-DVQPGDLLAILSAGAYGFTMSSNYNTR 385

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
           N     + + D    A     + D   
Sbjct: 386 NRAAEVIVDGDRVHVARERERFEDLIR 412


>gi|197302665|ref|ZP_03167719.1| hypothetical protein RUMLAC_01395 [Ruminococcus lactaris ATCC
           29176]
 gi|197298247|gb|EDY32793.1| hypothetical protein RUMLAC_01395 [Ruminococcus lactaris ATCC
           29176]
          Length = 404

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 127/380 (33%), Positives = 199/380 (52%), Gaps = 16/380 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P Y+ID+ +L  N    L + +  G K+LLA K F+ +  +  L  Y+ GT +S LY
Sbjct: 23  LPSPSYVIDETQLECNGFCLLAVAERTGCKVLLAQKAFSNYNFYPLLEPYLAGTEASGLY 82

Query: 62  EVMLGHEKFGG-ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           E  LG E+ GG E H +  AY++ E D +L   D I+FN+  QL K  ++A+   K IGL
Sbjct: 83  EARLGKEEMGGKEVHVFCAAYREDEFDELLEYADHIVFNSPGQLKKLGERAKAQGKSIGL 142

Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNV----NGLMFHNNCENKSFLCF 175
           R+NP  S      + DP  P SRLG   +   +   +++    +G+ FH  CE       
Sbjct: 143 RVNPECSTQDGHDIYDPCAPGSRLGTTREQWNQEMTEDLISLLDGIHFHTLCEQN-ADAL 201

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
              ++ +E +FG  + +++W++LGGG H T  DY      + L    +K+ VQ+YLEPGE
Sbjct: 202 EVTMRAVEDKFGDILPRMKWVNLGGGHHITRHDYERSRLEELLLSIKKKWDVQVYLEPGE 261

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTGP------- 287
           A+  N   L + VLDI +N +  + + D+S   H+PD L       IY            
Sbjct: 262 AVALNAGYLVSRVLDIVKNGETQIAILDASAACHMPDVLEMPYQPPIYNAAKQPDEGGQY 321

Query: 288 -YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
            +   + G +CLAGD+ G+++F K +K GD + F D+A Y   + N FNG+ +P I    
Sbjct: 322 QHRYRLAGPTCLAGDVIGDYYFPKELKAGDMVIFGDMAIYTTCKNNTFNGMPLPDIWSLG 381

Query: 347 VDGTIKAIREFSYNDYYNNL 366
           + G ++ +  F Y D+   L
Sbjct: 382 MQGRLEQVTAFGYQDFKTRL 401


>gi|149202882|ref|ZP_01879853.1| diaminopimelate decarboxylase [Roseovarius sp. TM1035]
 gi|149143428|gb|EDM31464.1| diaminopimelate decarboxylase [Roseovarius sp. TM1035]
          Length = 421

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 56/390 (14%), Positives = 117/390 (30%), Gaps = 26/390 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +              +  A+K  +   +  TL     G    S  
Sbjct: 25  VGTPFYCYSTATLSRHFRLFDEALAGMDHLVCYAMKAASNQAILKTLAGLGAGMDVVSGG 84

Query: 62  EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E          GE   ++     +D    A++         +  ++      A +L    
Sbjct: 85  EYARARAAGVPGERIVFSGVGKTRDEMRMALIGGIRQFNVESEPEMAVLNAVALELGLRA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
            I +R+NP V           +  ++ G       E   +        V G+  H   + 
Sbjct: 145 PITIRVNPDVDAKTHAKIATGKSENKFGIPIARAREVYAQAAALPGLEVIGIDVHIGSQL 204

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221
                F    + +    +        I  + LGGG+               ++   ++E 
Sbjct: 205 TELAPFRLAYEKVAELTQVLRADGHDIRRLDLGGGLGIPYTRSNEAPPLPTEYGALIREV 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280
                 +I +EPG  I  N   L + V+ +        ++ D+++   +   +       
Sbjct: 265 LGHLGCEIEIEPGRLIAGNAGILVSQVIYVKSGEGRDFLILDAAMNDLIRPAMYDAHHDI 324

Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +  +            V G  C +GD F +     P+  GD ++F     Y     + +N
Sbjct: 325 VPLHEAAPGVEQRPYDVVGPVCESGDTFAKGRMLPPLAEGDLVAFRSAGAYGAVMSSEYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              +    + +           ++++  N 
Sbjct: 385 TRPLVPEVLVHGRDFAVIRGRPTFDEMINR 414


>gi|161869233|ref|YP_001598399.1| diaminopimelate decarboxylase [Neisseria meningitidis 053442]
 gi|161594786|gb|ABX72446.1| diaminopimelate decarboxylase [Neisseria meningitidis 053442]
 gi|325127395|gb|EGC50328.1| diaminopimelate decarboxylase [Neisseria meningitidis N1568]
 gi|325143686|gb|EGC66005.1| diaminopimelate decarboxylase [Neisseria meningitidis M01-240013]
          Length = 414

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 66/385 (17%), Positives = 126/385 (32%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L    +            +  A+K      +         G    S  E
Sbjct: 18  GTPLYVYSQSALTEAFEHYQTAFAELSPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77

Query: 63  VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G   +T    V   + EI+ A+ +        ++ ++++ +  A +L     
Sbjct: 78  LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAP 137

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D +E+           + G+  H   +  
Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLT 197

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                    + I             +E + LGGG+    ++     +  + Q +++    
Sbjct: 198 DLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQNEKVPDLGAYAQAVQKLIGT 257

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++ LEPG ++V N   L T V  +     KN V+VD+++   +   L          
Sbjct: 258 RRLKLILEPGRSLVGNAGALLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317

Query: 284 NTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                 P TA + G  C  GD  G+       + GD +       Y  +  + +N  N  
Sbjct: 318 EPKNIAPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNARNRA 376

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + N  G     R  +      N
Sbjct: 377 AEVLVNGGGYKLIRRRETLEQQMAN 401


>gi|163738911|ref|ZP_02146324.1| diaminopimelate decarboxylase [Phaeobacter gallaeciensis BS107]
 gi|161387716|gb|EDQ12072.1| diaminopimelate decarboxylase [Phaeobacter gallaeciensis BS107]
          Length = 421

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 59/390 (15%), Positives = 119/390 (30%), Gaps = 26/390 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+YL     LL + +      K     +  A+K  +   +  TL Q   G    S  
Sbjct: 25  VGTPFYLYSTATLLRHFNLFDDALKGMDHLVCYAMKAASNQAILKTLAQAGAGMDVVSQG 84

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E +        G+   ++   K  +    A+          +  +++     A +L    
Sbjct: 85  EYLRAKAAGVPGDRIVFSGVGKTQDEIRTALSGGIRQFNVESEPEMDVINAVALELGVVA 144

Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            +  R+NP V           +  ++ G       E   +        V G+  H   + 
Sbjct: 145 PITVRVNPDVDAKTHAKIATGKSENKFGIPIARAREVYARAASLPGLKVIGIDVHIGSQL 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221
                F    + + +   +       I  + LGGG+                +   ++  
Sbjct: 205 TELAPFELAYQKVAELTEQLRADGHDIHRLDLGGGLGIPYTRSNDTPPLPVEYGAMVQRT 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESAT 280
                 +I +EPG  I  N   + + V+ +         I+D ++   +   +       
Sbjct: 265 LGHLGCEIEIEPGRLIAGNAGIMVSKVIYVKSGEDRDFLIIDGAMNDLIRPAMYEAYHDI 324

Query: 281 IYPNT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +               + G  C  GD F       P++ GD ++F     Y     + +N
Sbjct: 325 VPVIEPSAGVEQRAYDIVGPVCETGDTFARHRDMPPLEAGDLVAFRSAGAYGAVMASEYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              +    + N D      R   +++  N 
Sbjct: 385 SRPLIPEVLVNGDQFAVIRRRPDFDEMINR 414


>gi|254447342|ref|ZP_05060808.1| diaminopimelate decarboxylase [gamma proteobacterium HTCC5015]
 gi|198262685|gb|EDY86964.1| diaminopimelate decarboxylase [gamma proteobacterium HTCC5015]
          Length = 418

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 59/384 (15%), Positives = 123/384 (32%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +Q + +          +    +  A+K  +  G+   L +   G    S  E
Sbjct: 31  GTPAYVYSRQHIESAWRAYDEALGSWPHLICYAVKANSNLGVLSVLAKLGAGFDIVSGGE 90

Query: 63  VMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +          +   ++   K  +    A+          + ++L +    A+++     
Sbjct: 91  LERVLRAGGEAKNIVFSGVGKTAEEMRRALDVGIRCFNVESHAELLRLNRVAEEMGKTAP 150

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G      +             ++GL  H   +  
Sbjct: 151 ISLRVNPDVDAQTHPYISTGLKENKFGVAVDQALAVYREADALPNIAIHGLDCHIGSQLT 210

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK---EFSEK 224
           +   F   LK +     +      +I  + LGGG+    +D       + ++       +
Sbjct: 211 TIDPFVDALKRVLALVDQLAAEDIEIHHLDLGGGLGICYRDEQPPAVAELMQALTNTLGE 270

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
              ++  EPG +IV N   L T V  +   + KN  IVD+++   +   L     A    
Sbjct: 271 RRFELLFEPGRSIVGNAGVLLTQVEYLKHSDDKNFAIVDAAMNDLMRPSLYSAWQAIDAV 330

Query: 284 NTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                      + G  C  GD  G+      ++ GD ++ +    Y     + +N     
Sbjct: 331 EQREGNAKPYDIVGPICETGDFLGKDRELV-LEEGDLLAVQSCGAYGFTMASNYNTRPRA 389

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + +        +  ++     
Sbjct: 390 VELMVDAGDIKVIRQRETFEQLIE 413


>gi|17547698|ref|NP_521100.1| diaminopimelate decarboxylase [Ralstonia solanacearum GMI1000]
 gi|17430003|emb|CAD16688.1| probable diaminopimelate decarboxylase protein [Ralstonia
           solanacearum GMI1000]
          Length = 451

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 56/387 (14%), Positives = 114/387 (29%), Gaps = 26/387 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  N        +    ++  A+K  +   +     Q   G    S  E
Sbjct: 59  GTPTYVYSRAALTANYRAYAAACEGRNARVQYAMKANSNLAVLQIFAQLGAGFDIVSGGE 118

Query: 63  VMLGHEKFGG--ETHAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G   +     V    D    A+ +        ++ +L++  + A  L     
Sbjct: 119 LRRVLAAGGKAADVVFSGVGKTADEMRLALEAGVACFNVESIPELHRLNEVAGSLGKTAP 178

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    + +             V G+  H   +  
Sbjct: 179 VSLRVNPDVDAKTHPYISTGLKGNKFGVAFDEVLPTYRAAAAMPNLRVVGIDCHIGSQIT 238

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
               +   +    ++         ++  I +GGG+  T  D    D     +   ++   
Sbjct: 239 EVSPYLDAIDKVLDVVARLDAEGIRLSHIDVGGGLGITYTDETPPDITAFARTLLDRIEQ 298

Query: 228 Q------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280
           +      +  EPG ++V N   L T V  +         + D+++       +       
Sbjct: 299 RGFGDRTVLFEPGRSLVGNAGLLLTRVEFLKPGAAKNFCIVDAAMNDLARPAMYEAYHHI 358

Query: 281 IYPNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
           +        P    + G  C +GD  G        + GD ++      Y     + +N  
Sbjct: 359 VPVRERGGAPTVYDIVGPVCESGDWLGRDRAL-DAQPGDLLAILSAGAYGFTMSSNYNTR 417

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
                 + + D    A     + D   
Sbjct: 418 GRAAEVIVDGDRVHVARERERFEDLIR 444


>gi|254510199|ref|ZP_05122266.1| diaminopimelate decarboxylase [Rhodobacteraceae bacterium KLH11]
 gi|221533910|gb|EEE36898.1| diaminopimelate decarboxylase [Rhodobacteraceae bacterium KLH11]
          Length = 421

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 63/391 (16%), Positives = 120/391 (30%), Gaps = 28/391 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+     L  +              +  A+K  +   +  TL Q   G    S  
Sbjct: 25  VGTPFYVYSTATLQRHFKLFDDALDGTDHLVCYAMKAASNQAILKTLAQAGAGMDVVSGG 84

Query: 62  EVMLGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116
           E +        G+   ++   K  D    A+          +  ++      A  L K  
Sbjct: 85  EYLRAKAAGVPGDKIVFSGVGKTADEIRTALTGGIRQFNVESEPEMQVINAVALDLGKVA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCEN 169
            I +R+NP V           +  ++ G                    V G+  H   + 
Sbjct: 145 PITIRVNPDVDAKTHAKIATGKSENKFGIPISRASEVYALAASLPGLEVIGIDVHIGSQL 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221
                F      + +           I  + LGGG+                +   +++ 
Sbjct: 205 TELEPFELAYTKVAELTERLRSEGHNIRRLDLGGGLGIPYTRSNDAPPLPVEYGAMIQKT 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                 +I +EPG  I  N   + ++V+ +     ++ +I+D ++   +   + Y+    
Sbjct: 265 LGHLGCEIEIEPGRLIAGNAGLMVSSVIYVKSGEDRDFLILDGAMNDLIRPAM-YEAHHD 323

Query: 281 IYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
           I     P          + G  C  GD F       P+K GD I+F     Y     + +
Sbjct: 324 IVAVEEPAAGVEQRPYDIVGPVCETGDTFARQRNMPPLKSGDLIAFRSAGAYGAVMSSEY 383

Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           N   +    + N D         S+++  N 
Sbjct: 384 NTRPLIPEVLVNGDQFAVIRERPSFDEIINR 414


>gi|170289200|ref|YP_001739438.1| diaminopimelate decarboxylase [Thermotoga sp. RQ2]
 gi|170176703|gb|ACB09755.1| diaminopimelate decarboxylase [Thermotoga sp. RQ2]
          Length = 386

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 63/374 (16%), Positives = 116/374 (31%), Gaps = 15/374 (4%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  ++ L         + +   +    A+K      +   L +   G    +  E
Sbjct: 12  GTPTYVYFEETLRKRSRLVKEVFEGVNLLPTFAVKANNNPVLLRILREEGFGMDVVTKGE 71

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIG 119
           ++          +  +N   K  +        D   I  ++  ++     +      +  
Sbjct: 72  LLAAKLAGVPSRSIVWNGNGKSRDQMEYFLREDVRIINVDSFEEME-IWKELNPEGVEYF 130

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFHNNCENKSFLCF 175
           +R+NP V               + G   +D           N+ GL  H   +      F
Sbjct: 131 IRVNPEVDAKTHPHISTGLKKHKFGIPLEDLDSFMERFGSMNIRGLHVHIGSQITRVEPF 190

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-KYSVQIYLEPG 234
                 + +    +    E I++GGG         +     R K     K   ++ +E G
Sbjct: 191 VEAFNKVVRASERYG--FEEINIGGGWGINYSGEELDLSSYREKVVPALKRFKRVIIEIG 248

Query: 235 EAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLL--YQESATIYPNTGPYTAM 291
             IV  +  L   V+ +        V+VD  + A +   L   Y     +        A 
Sbjct: 249 RYIVAPSGYLLLRVVLVKRRHNKAFVVVDGGMNALIRPALYSAYHRIFVLGKQGKEMRAD 308

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
           V G  C +GD+         V+ GD I+ E+   Y     N +N    P   +   +G I
Sbjct: 309 VVGPLCESGDVIAYDRELPEVEPGDIIAVENAGAYGYTMSNNYNSTTRPAEVLVGENGRI 368

Query: 352 -KAIREFSYNDYYN 364
               R  +  D + 
Sbjct: 369 SLIRRRETEMDIFK 382


>gi|57505247|ref|ZP_00371176.1| carboxynorspermidine decarboxylase [Campylobacter upsaliensis
           RM3195]
 gi|57016383|gb|EAL53168.1| carboxynorspermidine decarboxylase [Campylobacter upsaliensis
           RM3195]
          Length = 382

 Score =  240 bits (611), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 136/379 (35%), Positives = 210/379 (55%), Gaps = 18/379 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TP Y++++ KL  N +    + + +G K+LLALK FA  G    + +Y+ G   S L+
Sbjct: 6   IQTPAYILEEDKLRKNCELLAKVSEKSGTKVLLALKGFAFSGAMKIVGEYLHGCACSGLW 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E     E    E H ++ A+KD E D +      IIFN++ Q + FK+KA    K +GLR
Sbjct: 66  EAKFAKEFVDKEIHTFSPAFKDEEFDEIAELSHHIIFNSLYQFHHFKEKA--KAKSLGLR 123

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
            NP  S +   L +P   +SRLG   KD   +++  V+GL FH  CE +S     A+LK 
Sbjct: 124 CNPEYSLAPKELYNPCGRYSRLGILSKDLENTDLSGVSGLHFHALCE-ESAEALEAVLKA 182

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            E +FG +I  ++W++ GGG H T K Y V+      K+FS+K+ VQ+YLEPGEA+   T
Sbjct: 183 FEAKFGKWIAGMKWVNFGGGHHITKKGYDVEKLIALCKKFSDKFGVQVYLEPGEAVGWQT 242

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP---------------NTG 286
             L  +V+DI EN K++ I+D+S EAH+PD ++   ++ +                   G
Sbjct: 243 GVLVASVIDIVENEKHIAILDTSSEAHMPDTIIMPYTSEVLNARILSAREGEQISSLREG 302

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
             T ++ G +CLAGD+ GE+ F+  ++ GD+I F D   Y+I +   FNG+ +P + +  
Sbjct: 303 EKTYLLAGNTCLAGDVMGEYAFKNALQRGDKIVFLDQIHYSIVKNTTFNGVILPNLMLYT 362

Query: 347 VDGTIKAIREFSYNDYYNN 365
               ++ IR+FSY DY   
Sbjct: 363 KKKKLEMIRKFSYEDYAKR 381


>gi|308390075|gb|ADO32395.1| diaminopimelate decarboxylase [Neisseria meningitidis alpha710]
          Length = 414

 Score =  240 bits (611), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 69/385 (17%), Positives = 129/385 (33%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  K  L    +            +  A+K      +         G    S  E
Sbjct: 18  GTPLYVYSKSALTEAFENYQTAFATLNPLVCYAVKANGNLSIIKHFASLGSGFDIVSDGE 77

Query: 63  VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +       G   +T    V   + EI+ A+ +        ++ ++++ +  A +L K   
Sbjct: 78  LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKVAP 137

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D +E+           + G+  H   +  
Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHASRQSHLKIVGIDCHIGSQLT 197

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                    + I     +       +E + LGGG+    +D     +  + Q +++    
Sbjct: 198 DLSPLVEACERILVLVDQLADEGIVLEHLDLGGGVGIVYQDENVPDLGAYAQAVQKLIGT 257

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++ LEPG ++V N  +L T V  +     KN V+VD+++   +   L          
Sbjct: 258 RRLKLILEPGRSLVGNAGSLLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317

Query: 284 NTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                 P TA + G  C  GD  G+       + GD +       Y  +  + +N  N  
Sbjct: 318 EPKNIAPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNARNRA 376

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + N  G     R  +      N
Sbjct: 377 AEVLVNGGGYKLIRRRETLEQQMAN 401


>gi|241664492|ref|YP_002982852.1| diaminopimelate decarboxylase [Ralstonia pickettii 12D]
 gi|240866519|gb|ACS64180.1| diaminopimelate decarboxylase [Ralstonia pickettii 12D]
          Length = 423

 Score =  240 bits (611), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 60/387 (15%), Positives = 114/387 (29%), Gaps = 26/387 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  N        +     +  A+K  +   +     Q   G    S  E
Sbjct: 31  GTPTYVYSRAALTANYRAYAAACEGRNAHVQYAMKANSNLAVLQVFAQLGAGFDIVSAGE 90

Query: 63  VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +              ++   K  D    A+          ++ +L++  D A        
Sbjct: 91  LKRVLAAGAPAAKVVFSGVGKSADEMRFALKVGVACFNVESIPELHRLNDVAASMGKVAP 150

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           + LRINP V              ++ G    + +             V G+  H   +  
Sbjct: 151 VSLRINPDVDAKTHPYISTGLKGNKFGVAFDEVLPTYRAAAAMPNLRVVGIDCHIGSQIT 210

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
               +   L    ++  +      ++  I +GGG+  T  D    D     +   ++   
Sbjct: 211 EVSPYLDALDKVLDVVTQLDAEGIRLAHIDVGGGLGITYTDETPPDITAFARTLLDRVEQ 270

Query: 228 Q------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280
           +      +  EPG ++V N   L T V  +         + D+++       +       
Sbjct: 271 RGFGDRTVLFEPGRSLVGNAGLLLTRVEYLKPGASKNFCIVDAAMNDLARPAMYEAYHHI 330

Query: 281 IYPNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
           +        P    V G  C +GD  G       V+ GD ++      Y     + +N  
Sbjct: 331 VPVRESQSAPVVYDVVGPVCESGDWLGRDRSLA-VQPGDVVAILSAGAYGFTMSSNYNTR 389

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
           N     + + D    A     + D   
Sbjct: 390 NRAAEVIVDGDKVHLARERECFEDLIR 416


>gi|89069733|ref|ZP_01157069.1| Orn/DAP/Arg decarboxylase, family 2 [Oceanicola granulosus
           HTCC2516]
 gi|89044679|gb|EAR50790.1| Orn/DAP/Arg decarboxylase, family 2 [Oceanicola granulosus
           HTCC2516]
          Length = 421

 Score =  240 bits (611), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 56/392 (14%), Positives = 120/392 (30%), Gaps = 26/392 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+   + LL +        +     +  ++K  +   +   L +   G    S  
Sbjct: 25  VGTPVYVYSAKTLLRHYGLFAQALEGLDHLICFSVKSLSNLAILSLLAREGAGMDVVSGG 84

Query: 62  EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116
           E          GE   ++     ++    A+          +  ++    + A    +  
Sbjct: 85  EYARARAAGVPGERIVFSGVGKTREEMRLALEGGIRQFNLESEPEMRALSEVASGMGVVA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNC-- 167
            + +R+NP V           +  ++ G   +       +        V G+  H     
Sbjct: 145 PVTVRVNPDVDARTHAKISTGKSENKFGIPIRKAREVYAEAAALPGLEVVGIDVHIGSQL 204

Query: 168 -ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221
            E   F      + ++          I  + LGGG+                +   +K  
Sbjct: 205 IELGPFEQAYRKVADLTATLRADGHDIRRLDLGGGLGIPYTRSNEVPPLPLDYGALIKRT 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280
                V++ +EPG  I  N+  L + V+ + E   ++ +I+D ++   V   +       
Sbjct: 265 VGDLGVEVQIEPGRLIAGNSGVLLSRVIYVKEGEGRDFLILDGAMNDLVRPAMYDAWHDI 324

Query: 281 IYPNT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +               V G  C +GD F        +  GD ++F     Y     + +N
Sbjct: 325 VPVAEPAAGGATRDFDVVGPICESGDTFARARPLPELAAGDLVAFRSAGAYGAVMASEYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367
              +    + + D      +  +Y +     S
Sbjct: 385 SRPLVPEVLVSGDHFAVIRQRPTYEELIARDS 416


>gi|307721570|ref|YP_003892710.1| diaminopimelate decarboxylase [Sulfurimonas autotrophica DSM 16294]
 gi|306979663|gb|ADN09698.1| diaminopimelate decarboxylase [Sulfurimonas autotrophica DSM 16294]
          Length = 403

 Score =  240 bits (611), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 56/383 (14%), Positives = 111/383 (28%), Gaps = 22/383 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D   +           K     +  A+K  +   +     +   G    S+ E
Sbjct: 12  GTPLYVYDFDYMSEQYTELKEAFKGRKSIIAYAVKANSNLSVVRHFAKMGSGADCVSIGE 71

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117
           V              ++   K  +        D   I   + ++L + +  A++L    +
Sbjct: 72  VRRAFLAGIPAYKIIFSGVGKSDDEIREAIEKDILYINVESEAELQRVESIAEELGRPSR 131

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENK 170
           I +R+NP++              ++ G               SE  +  G+ FH   +  
Sbjct: 132 ISIRVNPNIDPQTHPYISTGLHDNKFGVDLSTAKRMYIQAKNSEHLDPVGIHFHIGSQLT 191

Query: 171 SFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYP---VKDFCQRLKEFSEK 224
                    + +            ++++  +GGG+     +       D+ Q +      
Sbjct: 192 QLQPIREAAEIVADLIRSLQAIDIELKFFDVGGGLGVKYGNEETIKPYDYAQAILSTLTA 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES---AT 280
             + I  EPG  +  N     T VL       K  V+VD ++   +   L        A 
Sbjct: 252 LDLTILCEPGRFLTANAGYFVTKVLYEKQNGDKKFVVVDGAMNDLLRPSLYNAYHKIEAI 311

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              N       + G  C +GD F + +    +   D +       Y     + +N     
Sbjct: 312 TDNNGKTREVDIVGPVCESGDFFAKNYPLPELNRNDLLVIHSAGAYGFGMGSNYNTRGRS 371

Query: 341 TIAVKNVDGTIKAIREFSYNDYY 363
                         +   + D  
Sbjct: 372 AEVAVQNGKARLIRKRECFEDLI 394


>gi|83951152|ref|ZP_00959885.1| diaminopimelate decarboxylase [Roseovarius nubinhibens ISM]
 gi|83839051|gb|EAP78347.1| diaminopimelate decarboxylase [Roseovarius nubinhibens ISM]
          Length = 421

 Score =  240 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 52/390 (13%), Positives = 116/390 (29%), Gaps = 26/390 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+     L  +        +     +  A+K  +   +  TL +   G    S  
Sbjct: 25  VGTPFYVYSTATLERHFRLFDEALEGIDHLVCYAMKAASNQAILKTLARLGAGMDVVSGG 84

Query: 62  E-VMLGHEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E          G+   ++     +D    A+          +  ++    + A +L  + 
Sbjct: 85  EYARAIAAGVPGDRIVFSGVGKTRDEMRAALTGGIRQFNVESEPEMAALNEVALELGTRA 144

Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCEN 169
            +  R+NP V           +  ++ G                    V G+  H   + 
Sbjct: 145 PITVRVNPDVDAKTHAKIATGKSENKFGIPIARARDVYAQAAAMPGLEVIGIDVHIGSQL 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221
                F    + + +           I  + LGGG+               ++ + +KE 
Sbjct: 205 TDLEPFRLAYRKVAELTETLRAEGHDIRRLDLGGGLGIPYARGNEAPPLPVEYGKMIKEE 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280
                 +I +EPG  +  N   + + V+ +        ++ D ++   +   +       
Sbjct: 265 LGHLGCEIEIEPGRLVAGNAGLMVSRVIYVKSGEDREFLILDGAMNDLIRPAMYDAHHDI 324

Query: 281 IYPNT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +               V G  C +GD F +      +  GD ++F     Y     + +N
Sbjct: 325 VPVVEPQAGAEQRPYDVVGPVCESGDTFAKGRNLPVLNAGDLVAFRSAGAYGAVMSSEYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              +    + +           S+++  N 
Sbjct: 385 TRPLIPEVLVHGHQFAVIRARPSFDEMINR 414


>gi|300702820|ref|YP_003744421.1| diaminopimelate decarboxylase [Ralstonia solanacearum CFBP2957]
 gi|299070482|emb|CBJ41777.1| Diaminopimelate decarboxylase [Ralstonia solanacearum CFBP2957]
          Length = 419

 Score =  240 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 58/387 (14%), Positives = 116/387 (29%), Gaps = 26/387 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  N        +    ++  A+K  +   +     Q   G    S  E
Sbjct: 27  GTPTYVYSRAALTANYRAYAAACEGRNARVQYAMKANSNLAVLQIFAQLGAGFDIVSGGE 86

Query: 63  VMLGHEKFGG--ETHAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G   +     V    D    A+ +        ++ +L++  + A  L     
Sbjct: 87  LRRVLAAGGKAADVVFSGVGKTADEMRLALEAGVACFNVESIPELHRLNEVAGSLGKTAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G   ++ +             V G+  H   +  
Sbjct: 147 VSLRVNPDVDAKTHPYISTGLKGNKFGIAFEEVLPTYRAAAAMPNLRVVGIDCHIGSQIT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
               +   +    ++         ++  I +GGG+  T  D    D     +   ++   
Sbjct: 207 EVSPYLDAIDKVLDVVARLDAEGIRLSHIDVGGGLGITYTDETPPDITAFARTLLDRIEQ 266

Query: 228 Q------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280
           +      +  EPG ++V N   L T V  +         + D+++       +       
Sbjct: 267 RGFGDRTVLFEPGRSLVGNAGLLLTRVEFLKPGAAKNFCIVDAAMNDLARPAMYEAYHHI 326

Query: 281 IYPNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
           +             V G  C +GD  G       V+ GD ++      Y     + +N  
Sbjct: 327 VPVRERGGAATVYDVVGPVCESGDWLGRDRAL-DVQPGDLLAILSAGAYGFTMSSNYNTR 385

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
           N     + + D    A     + D   
Sbjct: 386 NRAAEVIVDGDRVHVARERERFEDLVR 412


>gi|312115134|ref|YP_004012730.1| diaminopimelate decarboxylase [Rhodomicrobium vannielii ATCC 17100]
 gi|311220263|gb|ADP71631.1| diaminopimelate decarboxylase [Rhodomicrobium vannielii ATCC 17100]
          Length = 422

 Score =  240 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 64/389 (16%), Positives = 114/389 (29%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      +  +              +  A+K  +   +  TL +   G    S  
Sbjct: 25  VGTPFYCYSTATIERHYRVFAEAFTGLDALVCYAIKANSNVSVIRTLAKLGSGADVVSEG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118
           E+          +   ++   K     A   +         + ++L      A    +  
Sbjct: 85  EIRRALAAGIPADKIVFSGVGKTEAEMAFALDAGIYGFNVESEAELRALSQVASGRGRTA 144

Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCEN 169
            +  RINP V           +   + G   +D              +V G+  H   + 
Sbjct: 145 RIAFRINPDVDAKTHAKISTGKSEHKFGVSWRDARALYALARDLPGLDVAGVHMHIGSQI 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221
                F      +     +       I +++LGGG+    +          D+ + +   
Sbjct: 205 THMEPFRDAFDLMANLVEDLRRDGHTISYVNLGGGLGIPYRWDQEVPPLPSDYAEIVIGL 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESAT 280
           S +   ++  EPG  IV N   L T V+    +  K  VIVD+ +   V   L       
Sbjct: 265 SNRLGARLLFEPGRIIVGNAGILVTQVIYSKHSGEKRFVIVDAGMNDLVRPTLYDAYHDI 324

Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
              N          A V G  C  GD   +      +  GD I+      Y   + + +N
Sbjct: 325 WPVNEAQRNASIGRADVVGPVCETGDFLAKDRDMPELAPGDLIAVMTAGAYGAAQSSTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    + N           SY D   
Sbjct: 385 TRRLVPEVLVNGADYAVVRPRPSYEDMLR 413


>gi|300690200|ref|YP_003751195.1| diaminopimelate decarboxylase [Ralstonia solanacearum PSI07]
 gi|299077260|emb|CBJ49886.1| Diaminopimelate decarboxylase [Ralstonia solanacearum PSI07]
          Length = 419

 Score =  240 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 57/387 (14%), Positives = 118/387 (30%), Gaps = 26/387 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  N        ++   ++  A+K  +   +     Q   G    S  E
Sbjct: 27  GTPTYVYSRAALTANYRAYAAACESRNARVQYAMKANSNLAVLQIFAQLGAGFDIVSGGE 86

Query: 63  VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++   K  D    A+ +        ++ +L++  + A  L     
Sbjct: 87  LRRVLAAGGKAANVVFSGVGKTADEMRLALEAGVACFNVESIPELHRLNEVAGSLGKTAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           + LRINP V              ++ G   ++ +             + G+  H   +  
Sbjct: 147 VSLRINPDVDAKTHPYISTGLKGNKFGVAFEEVLPTYRAAAAMPNLRMVGIDCHIGSQIT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
               +   +    ++         ++  I +GGG+  T  D    D     +   ++   
Sbjct: 207 EVSPYLDAIDKVLDVVARLDAEGIRLSHIDVGGGLGITYTDETPPDITAFARTLLDRIEQ 266

Query: 228 Q------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280
           +      +  EPG ++V N   L T V  +         + D+++       +       
Sbjct: 267 RGFGDRTVLFEPGRSLVGNAGLLLTRVEFLKPGAAKNFCIVDAAMNDLARPAMYEAYHHI 326

Query: 281 IYPNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
           +        P    + G  C +GD  G       V+ GD ++      Y     + +N  
Sbjct: 327 VPVRERGGAPTVYDIVGPVCESGDWLGRDRAL-DVQPGDLLAILSAGAYGFTMSSNYNTR 385

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
           N     + + D    A     + D   
Sbjct: 386 NRAAEVIVDGDRVHVARERERFEDLIR 412


>gi|28899758|ref|NP_799363.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153838760|ref|ZP_01991427.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus AQ3810]
 gi|260365174|ref|ZP_05777739.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus K5030]
 gi|260878126|ref|ZP_05890481.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus AN-5034]
 gi|260895817|ref|ZP_05904313.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus Peru-466]
 gi|260900850|ref|ZP_05909245.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus AQ4037]
 gi|28808010|dbj|BAC61247.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149747846|gb|EDM58730.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus AQ3810]
 gi|308087170|gb|EFO36865.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus Peru-466]
 gi|308092764|gb|EFO42459.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus AN-5034]
 gi|308110594|gb|EFO48134.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus AQ4037]
 gi|308111029|gb|EFO48569.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus K5030]
 gi|328472415|gb|EGF43281.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus 10329]
          Length = 417

 Score =  240 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 61/378 (16%), Positives = 111/378 (29%), Gaps = 24/378 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +  G+ + L +   G    S  E
Sbjct: 27  GTPLYVYSRATLERHWKAFDSAVGQHPHLVCYAVKANSNLGVLNALARLGSGFDIVSGGE 86

Query: 63  V-MLGHEKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +  +       +   ++   K       A+          +  +L +    A +L     
Sbjct: 87  LERVIAAGGDAKKVVFSGVGKTPAEMKRALELGIKCFNVESEPELERLNKVAGELGVIAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           I LRINP V              ++ G       E           NV G+  H   +  
Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAPEVYQFAQSLPNLNVQGIDCHIGSQLT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
           S   F         +  +       I  + +GGG+           P       L     
Sbjct: 207 SIDPFIDATDRLLALIDDLKAQGINIRHLDVGGGLGVVYRDELPPQPSDYAKALLGRLEN 266

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279
              +++  EPG AI  N   L T V  +         I+D+++   +   L         
Sbjct: 267 HQDLELIFEPGRAIAANAGILLTRVEFLKHTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
               N  P T  + G  C  GD  G+      ++ GD ++      Y     + +N    
Sbjct: 327 VSPRNGEPQTYDLVGPICETGDFLGKDRALV-LQEGDLLAVRSAGAYGFVMSSNYNTRTR 385

Query: 340 PTIAVKNVDGTIKAIREF 357
               + + + +    +  
Sbjct: 386 AAEVMVDGNQSHLVRQRE 403


>gi|310642618|ref|YP_003947376.1| diaminopimelate decarboxylase [Paenibacillus polymyxa SC2]
 gi|309247568|gb|ADO57135.1| Diaminopimelate decarboxylase [Paenibacillus polymyxa SC2]
          Length = 455

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 67/400 (16%), Positives = 135/400 (33%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++D+Q +       +   +  G   ++  A K F    M     +        S 
Sbjct: 30  GTPLYIVDEQLVRRRCREFIEAFRETGLKFQVAYASKAFCVMAMCALAAEEGMSLDVVSS 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E   ++   K  E   +   +     + ++  +L+  +  A +  ++
Sbjct: 90  GELFTALQAGFPAERIHFHGNNKTPEEIEMALEAQIGCFVVDSKMELHLLQALASEKGQQ 149

Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
             I LR+ P V           +  S+ G            +  I+ +  N+ G+  H  
Sbjct: 150 VNILLRVTPGVEAHTHEYMATGQEDSKFGFDIANGTARQAVEQAIKLDHLNLLGVHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEW----ISLGGGIHFTDKDYPVK----DFCQRL 218
            +      F    + +         Q+++    I+LGGG      +         + Q +
Sbjct: 210 SQIFEVNGFQMAAERVAVFCREIKEQLQYSFKVINLGGGFGIRYTEEDTPLKLSTYVQAI 269

Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            E  + +         +I++EPG +IV ++ T   TV  I +  +    V     +  + 
Sbjct: 270 GEAVKTHFSGLYDELPEIWIEPGRSIVGDSGTTLYTVGSIKDIPQVRKYVSVDGGMTDNP 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   +      +    T  + G+ C +GD+            GD ++      
Sbjct: 330 RPALYQAKYEAMLANRAQDANEETVSIAGKCCESGDMLIWDVELPRPNSGDLLAVASTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           YN +  + +N I  P +   N       +R  +Y D   N
Sbjct: 390 YNYSMASNYNRIRRPAVVFVNNGEAELVVRRETYEDIVRN 429


>gi|254670860|emb|CBA07331.1| Diaminopimelate decarboxylase [Neisseria meningitidis alpha153]
          Length = 406

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 66/385 (17%), Positives = 128/385 (33%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L    +            +  A+K      +         G    S  E
Sbjct: 18  GTPLYVYSQSALTEAFEHYQTAFAELSPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77

Query: 63  VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           ++      G   +T    V   + EI+ A+ +        ++ ++++ +  A++L     
Sbjct: 78  LVRVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAERLGKTAS 137

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D +E+           + G+  H   +  
Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLT 197

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                    + I             +E + LGGG+    +D     +  + Q +++    
Sbjct: 198 DLSPLVEACERILILVDTLVAEGIVLEHLDLGGGVGIVYQDESVPDLGAYAQAVQKLIGT 257

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++ LEPG ++V N   L T V  +     KN V+VD+++   +   L          
Sbjct: 258 RRLKLILEPGRSLVGNAGALLTRVEFVKHGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317

Query: 284 NTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
            T      TA + G  C  GD  G+       + GD +       Y  +  + +N  N  
Sbjct: 318 ETKNIATLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNARNRA 376

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + +  G     R  +      N
Sbjct: 377 AEVLVDGGGYRLIRRRETLEQQMAN 401


>gi|86139003|ref|ZP_01057574.1| diaminopimelate decarboxylase [Roseobacter sp. MED193]
 gi|85824234|gb|EAQ44438.1| diaminopimelate decarboxylase [Roseobacter sp. MED193]
          Length = 421

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 62/390 (15%), Positives = 118/390 (30%), Gaps = 26/390 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+     LL +        +     +  A+K  +   +  TL Q   G    S  
Sbjct: 25  VGTPFYVYSTATLLRHFRLFDEALEGMDHLVCYAMKAASNQAILKTLAQAGAGMDVVSQG 84

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116
           E +        G+   ++   K  +                +  ++      A +L +  
Sbjct: 85  EYLRAKAAGVPGDKIVFSGVGKTADEIRCALSGGIRQFNVESEPEMAVINAVALELGQVA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            I +R+NP V           +  ++ G       E            V G+  H   + 
Sbjct: 145 PITIRVNPDVDAKTHAKIATGKSENKFGIPISRAREVYAHAATLPGLKVIGVDCHIGSQL 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221
                F    + I +           I  + LGGG+               ++ Q +KE 
Sbjct: 205 TELEPFRKAYEKIAELTESLRADGHDIHRLDLGGGLGIPYTRSNEAPPLPVEYGQLIKET 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESAT 280
                 +I +EPG  I  N   + + V+ +         IVD ++   +   +       
Sbjct: 265 LGHLGCEIEIEPGRLIAGNAGLMVSKVIYVKSGEDREFLIVDGAMNDLIRPAMYEAHHDI 324

Query: 281 IYPNT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +  N            + G  C  GD F +     P+  GD I+F     Y     + +N
Sbjct: 325 VAVNEPAPGIENRPYDIVGPVCETGDTFAKQRDMPPLAAGDLIAFRSAGAYGAVMASEYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              +    + + D          +++  N 
Sbjct: 385 SRPLIPEVLVHGDQFAVIRPRPDFDEMINR 414


>gi|312885171|ref|ZP_07744851.1| carboxynorspermidine decarboxylase [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309367184|gb|EFP94756.1| carboxynorspermidine decarboxylase [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 376

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 166/367 (45%), Positives = 243/367 (66%), Gaps = 3/367 (0%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP+++ID+ KL+ NL  A +++  +G KL+LALKCF+ WG+FD +  Y+DGTTSS  +E
Sbjct: 7   KTPFFMIDENKLIENLKIAQHLKDISGAKLVLALKCFSTWGVFDIIKPYLDGTTSSGPFE 66

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
           V LG+E FG ETHAY+V Y   +++AV + CD +IFN+ SQL  ++   ++    IGLR+
Sbjct: 67  VKLGYETFGKETHAYSVGYSKEDVEAVSTYCDKLIFNSQSQLQAYRHLVKE-GTSIGLRL 125

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           NP VS++   LADP R FSRLG   +  +      ++G MFH NCENK    FS +L+ I
Sbjct: 126 NPGVSHASQDLADPARQFSRLGVHQEQLLSESFNCIDGAMFHMNCENKDAGSFSQLLEQI 185

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTT 242
            + FG ++ Q++W+SLGGGI FT   Y ++   + L++F++++ VQ+YLEPGEAI+T TT
Sbjct: 186 SENFGEYLNQLKWVSLGGGIFFTWPGYDIQTLGKSLRDFAKRHGVQVYLEPGEAIITETT 245

Query: 243 TLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLAG 300
            L  TV+DI EN     IVDS+ EAH  D L+Y E A++    N G +  ++   SCLAG
Sbjct: 246 DLVVTVVDIVENGMRTAIVDSATEAHRLDTLIYNEPASVLEASNDGEHQYVIGSCSCLAG 305

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           D F    F+KP++IG R+  +D AGY + + NWFNG+ MP+I  +  +G ++ + EF Y 
Sbjct: 306 DQFCIARFDKPLEIGQRLHIQDSAGYTMVKLNWFNGLRMPSIYCRRSNGEVRKLNEFGYQ 365

Query: 361 DYYNNLS 367
           D+ + LS
Sbjct: 366 DFKDALS 372


>gi|163744294|ref|ZP_02151654.1| diaminopimelate decarboxylase [Oceanibulbus indolifex HEL-45]
 gi|161381112|gb|EDQ05521.1| diaminopimelate decarboxylase [Oceanibulbus indolifex HEL-45]
          Length = 421

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 61/390 (15%), Positives = 121/390 (31%), Gaps = 26/390 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+     LL +              +  A+K  +   +  TL Q   G    S  
Sbjct: 25  VGTPVYVYSTATLLRHFHLFDDALSGMDHLVCYAMKANSNQAVLRTLAQAGAGMDVVSGG 84

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116
           E          G+   ++   K  E   +            +  ++      A++L K  
Sbjct: 85  EYRRAKAAGVAGDRIVFSGVGKTREEIELALTGGIRQFNVESEPEMILLDIVARELGKVA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
            I +R+NP V           +  ++ G       E            + G+  H   + 
Sbjct: 145 PITIRVNPDVDAKTHAKIATGKSENKFGIPIARAREVYAMAATLPGLEIIGIDVHIGSQL 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221
                F      + +           I  + LGGG+    +          D+   ++  
Sbjct: 205 TDLAPFEQAYGKVAELTEVLRADGHNIRRLDLGGGLGIPYERSNSAPPLPTDYGAMVQRT 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280
                 +I +EPG  I  N   L + V+ +     ++ +I+D+++   +   +       
Sbjct: 265 LGHLDCEIEIEPGRLIAGNAGVLVSEVIYLKSGEGRDFLILDAAMNDLIRPAMYDAWHDI 324

Query: 281 IYPNT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +  N       P    + G  C +GD F +      +  GD ++F     Y     + +N
Sbjct: 325 VPLNEPAPGAEPRPVDIVGPVCESGDTFAKQRMMPVLGSGDLVAFRSAGAYGAVMSSEYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              +    + N D         S+++  N 
Sbjct: 385 SRPLIPEVLVNGDQFAVIRPRPSFDEMINR 414


>gi|126726029|ref|ZP_01741871.1| diaminopimelate decarboxylase [Rhodobacterales bacterium HTCC2150]
 gi|126705233|gb|EBA04324.1| diaminopimelate decarboxylase [Rhodobacterales bacterium HTCC2150]
          Length = 421

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 54/390 (13%), Positives = 112/390 (28%), Gaps = 26/390 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y         +              +  A+K  +   +   L     G    S  
Sbjct: 25  VGTPFYAYSAATFARHFQVLDEALSWGPHLICYAMKANSNQAILKMLGDMGAGMDVVSGG 84

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E          GE   ++   K  +   +            +  ++    + A KL    
Sbjct: 85  EYARARAAGVPGERIVFSGVGKTRDEIEMTLKGGIRQFNVESEPEMVVLSEIATKLGLIA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            I +R+NP V           +  ++ G       E            + G+  H   + 
Sbjct: 145 PITIRVNPDVDAKTHEKIATGKKENKFGIPISRAREVYAMAAGLPGLKIVGIDVHIGSQL 204

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKDFC-----QRLKEF 221
                +    + +    K       +I  + LGGG+                  Q ++E 
Sbjct: 205 TDLTPYREAFELVAELTKTLREDGHEISRLDLGGGLGIPYARDNDAPPVPAEYGQIVRET 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                 +I +EPG  +  N   L + V+ +     +  +I+D+++   +   +       
Sbjct: 265 VGDLGCEIEIEPGRLVAGNAGVLVSEVIYVKSGEDREFLILDAAMNDLIRPAMYSAHHDI 324

Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +               + G  C +GD F +     P++  D ++F     Y     + +N
Sbjct: 325 VPLKEAEVGVEMQPYDIVGPVCESGDTFAKQRPLPPLEATDLVAFRSAGAYGAVMASEYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              M    +   D         +  +  N 
Sbjct: 385 TRPMVPEVLVMGDQFAVIRPRPTLEEIINR 414


>gi|240112021|ref|ZP_04726511.1| hypothetical protein NgonM_00270 [Neisseria gonorrhoeae MS11]
 gi|254492827|ref|ZP_05105998.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae 1291]
 gi|268598074|ref|ZP_06132241.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae MS11]
 gi|226511867|gb|EEH61212.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae 1291]
 gi|268582205|gb|EEZ46881.1| diaminopimelate decarboxylase [Neisseria gonorrhoeae MS11]
          Length = 406

 Score =  239 bits (610), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 67/385 (17%), Positives = 128/385 (33%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L    +            +  A+K      +      +  G    S  E
Sbjct: 18  GTPLYVYSQSALTGAFENYQTAFAALNPLVCYAVKANGNLSIIKHFASFGSGFDIVSGGE 77

Query: 63  VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G   +T    V   + EI+ A+ +        ++ ++++ +  A +L     
Sbjct: 78  LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKIAARLGKTAP 137

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D +E+           + G+  H   +  
Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLT 197

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                    + I             +E + LGGG+    KD     +  + + +++    
Sbjct: 198 DLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYKDEGVPDLGAYARAVQKLMGT 257

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++ LEPG ++V N   L T V  +     KN V+VD+++   +   L          
Sbjct: 258 RRLKLILEPGRSLVGNAGALLTRVEFVKHGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317

Query: 284 NTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
            T    P TA + G  C  GD  G+       + GD +       Y  +  + +N  N  
Sbjct: 318 ETKNIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNTRNRA 376

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + +  G     R  +      N
Sbjct: 377 AEVLVDGGGYKLIRRRETLEQQMAN 401


>gi|39995269|ref|NP_951220.1| diaminopimelate decarboxylase [Geobacter sulfurreducens PCA]
 gi|39982031|gb|AAR33493.1| diaminopimelate decarboxylase [Geobacter sulfurreducens PCA]
 gi|298504274|gb|ADI82997.1| diaminopimelate decarboxylase [Geobacter sulfurreducens KN400]
          Length = 417

 Score =  239 bits (610), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 55/385 (14%), Positives = 114/385 (29%), Gaps = 22/385 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P Y+     L  +              +  ++K  +   +  T      G    S  
Sbjct: 25  VGSPVYVYSHATLTRHFTAFDEAFAGVPHTICYSVKANSTQAVLRTFITLGGGADIVSGG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118
           E+          +   Y+   K  +      N         +  +L +  + A ++ KK 
Sbjct: 85  ELYRALQAGVDPKKVVYSGVGKKDDEIEYALNTGILMFNVESEQELTRISEIASRMGKKA 144

Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
           G+  R+NP V              ++ G      +    +       +V G+  H   + 
Sbjct: 145 GIAIRVNPDVDPQTHPYITTGLKNAKFGITIDRAMAEYARAKTLPGIDVIGIDMHIGSQL 204

Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS---E 223
                F   ++ ++    +       +++   GGG+                KE     +
Sbjct: 205 TKVTPFVDSIEKLKTMIANLRGQGIDLQYFDCGGGLGIQYSTEEPPLPADYGKEIVAATK 264

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQES---A 279
           +  + +  EPG  IV N   L  T L     + KN +++D+ +       L         
Sbjct: 265 ELGMHLLFEPGRNIVGNAGILVATCLFTKERDEKNFIMIDAGMNDLARPALYGSFHGVQP 324

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            +    G   A + G  C +GD   +       + GD ++F     Y     + +N    
Sbjct: 325 VVKDQDGMIVADIVGPICESGDFLVKDREVPMFRQGDLMAFMSAGAYGFAMSSTYNSRPR 384

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
               +   +         +  D   
Sbjct: 385 VAEVMVKGNQFEVVRERETVEDLIR 409


>gi|255065336|ref|ZP_05317191.1| diaminopimelate decarboxylase [Neisseria sicca ATCC 29256]
 gi|255050161|gb|EET45625.1| diaminopimelate decarboxylase [Neisseria sicca ATCC 29256]
          Length = 406

 Score =  239 bits (610), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 64/385 (16%), Positives = 126/385 (32%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L    +            +  A+K      +         G    S  E
Sbjct: 18  GTPLYVYSQSALTEAFENYQTAFAALSPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77

Query: 63  VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G   +T    V   + EI+ A+ +        ++ ++++ +  A++L     
Sbjct: 78  LARVLAAGGDAAKTIFSGVGKSEAEIEFALHAGVKCFNMESIPEIDRIQKVAERLGKTAS 137

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D +E+           + G+  H   +  
Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAARQSHLKIIGIDCHIGSQLT 197

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                    + I             +E + LGGG+    +D     +  + Q +++    
Sbjct: 198 DLSPLVEACERILILVDRLADEGIVLEHLDLGGGVGIVYQDETIPDLGAYAQAVQKLIGT 257

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++ LEPG ++V N  +L   V  +     KN V+VD+++   +   L          
Sbjct: 258 RRLKLILEPGRSLVGNAGSLLARVEFVKHGEEKNFVMVDAAMNDLMRPALYDAYHRIEAV 317

Query: 284 NTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                 P TA + G  C  GD  G+       + GD +       Y  +  + +N  N  
Sbjct: 318 EPKNIPPLTANIVGPICETGDFLGKDRTLA-CEEGDLLVIRSAGAYGASMASNYNTRNRA 376

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + +        R  +      N
Sbjct: 377 AEVLVDGSEYRLIRRRETLEQQMAN 401


>gi|149913117|ref|ZP_01901651.1| diaminopimelate decarboxylase [Roseobacter sp. AzwK-3b]
 gi|149813523|gb|EDM73349.1| diaminopimelate decarboxylase [Roseobacter sp. AzwK-3b]
          Length = 421

 Score =  239 bits (610), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 59/391 (15%), Positives = 118/391 (30%), Gaps = 28/391 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +              +  A+K  +   +  TL +   G    S  
Sbjct: 25  VGTPFYCYSTATLTRHFRLFDEALAGTEHLICYAMKAASNLAILKTLAELGAGMDVVSGG 84

Query: 62  EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E          GE   ++     +D    A+          +  ++    + A  L    
Sbjct: 85  EYARAKAAGVPGERIVFSGVGKTRDEMRMALEGGIRQFNVESEPEMAALNEVALSLGLRA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCEN 169
            I +R+NP V           +  ++ G           +        V G+  H   + 
Sbjct: 145 PITVRVNPDVDAKTHAKIATGKSENKFGIPIARAREIYAEAAAMPGLEVVGIDVHIGSQL 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221
                F    + +             I  + LGGG+               D+ Q +K+ 
Sbjct: 205 TELEPFRLAYEKVADLTEALRADGHDIRRLDLGGGLGIPYTRSNEAPPLPVDYGQLIKDT 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280
                 +I +EPG  +V N   L + V+ +        ++ D+++   +   + Y     
Sbjct: 265 VGHLGCEIEIEPGRLVVGNAGILVSEVIYLKAGEGRDFLILDAAMNDLIRPAM-YDAYHD 323

Query: 281 IYPNTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
           I P   P          + G  C +GD F +      +  GD ++F     Y     + +
Sbjct: 324 IVPVREPQPGAEQAAYDIVGPVCESGDTFAKARMMPALAQGDLVAFRSAGAYGAVMASEY 383

Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           N   +    + +           ++++  N 
Sbjct: 384 NTRPLVPEVLVHEHQFAVIRARPTFDEIINR 414


>gi|299137487|ref|ZP_07030669.1| diaminopimelate decarboxylase [Acidobacterium sp. MP5ACTX8]
 gi|298600892|gb|EFI57048.1| diaminopimelate decarboxylase [Acidobacterium sp. MP5ACTX8]
          Length = 423

 Score =  239 bits (610), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 64/388 (16%), Positives = 124/388 (31%), Gaps = 26/388 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+     +                 +  A+K  ++  +   L +   G    S  E
Sbjct: 32  GTPLYVYSGDAIAERARMLQQEFAGVLHTICYAVKANSSLAVMRMLGELGCGFDIVSGGE 91

Query: 63  VMLGHEKFG---GETHAYNVAYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           +           G      V  +  E+  A+ +        + ++L    ++AQ L K  
Sbjct: 92  LERVRRAAPEALGRVVFSGVGKQAWEMDAALDAGILLFNVESEAELEVLAERAQALGKIA 151

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCEN 169
              LR+NP V               + G   +   E   + V        G+  H   + 
Sbjct: 152 RIALRVNPDVFAETHPYISTGLREHKFGIAIERAREVYQRAVRMQGIEPAGVSVHIGSQI 211

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKD------FCQRLKE 220
           +S   F+  ++ +    ++       I ++  GGG                  + + L+E
Sbjct: 212 RSVEPFAEAVRRVRSLVEDLRGDGMDIRYVDAGGGFGIEYGKAEFDPAARVAEYARALRE 271

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESA 279
             +  +  + LEPG  +V     L T VL   +N  K+ VI D+++   +   L      
Sbjct: 272 VLDGLNAHLLLEPGRFLVAQAGALLTRVLYTKQNGKKHFVITDAAMNDLIRPALYQAHHE 331

Query: 280 TIYPNTGPYTAM---VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
            +             + G  C +GD F      + ++ GD +   D   Y ++  + +N 
Sbjct: 332 IVPVVKDERAVQVADIVGPVCESGDFFARDRETQELRQGDLVVLLDAGAYGMSLASHYNT 391

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364
              P   +          R  + +D   
Sbjct: 392 RVRPAEVLVEQGRARLIRRRETLDDLLA 419


>gi|153813546|ref|ZP_01966214.1| hypothetical protein RUMOBE_03968 [Ruminococcus obeum ATCC 29174]
 gi|149830346|gb|EDM85438.1| hypothetical protein RUMOBE_03968 [Ruminococcus obeum ATCC 29174]
          Length = 404

 Score =  239 bits (610), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 125/378 (33%), Positives = 199/378 (52%), Gaps = 14/378 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTP Y++D++ L+ N      + +  G K+LLA K F+ +  +     Y+ GT +S L+
Sbjct: 24  LKTPCYILDEKALIKNAKLLGEVSERTGCKMLLAQKAFSNYDCYRFFEPYLAGTEASGLF 83

Query: 62  EVMLGHEKFGG-ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           E  LG E+  G E H +   Y+  + + +L   D I+FN+ SQL +F  KA+   K +GL
Sbjct: 84  EARLGAEEMPGKEVHVFCAGYRADDFEELLQYADHIVFNSPSQLLRFGAKAKVAGKSVGL 143

Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSFL 173
           RINP  S      + DP  P SR+G       E+  KN      ++GL FH  CE  S  
Sbjct: 144 RINPECSTQEGHDIYDPCAPGSRMGTTRAQWDEAFQKNPELLDLLDGLHFHTLCEQDSDD 203

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
                L +++K FG   ++++WI+ GGG H T   Y ++   + ++   E++  ++YLEP
Sbjct: 204 -LETTLVSVKKHFGDLASRVKWINFGGGHHITRPGYDIERLERCIRMVQEEWKAEVYLEP 262

Query: 234 GEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPY 288
           GEA   N   L T+VLD+       + IVD+S   H+PD L       +        G  
Sbjct: 263 GEAWALNAGFLLTSVLDVLKNGETQIAIVDASAACHMPDVLEMPYLPPLLGTDETEEGGI 322

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348
           T  + G +CL+GD+ GE+ F +  + GD + F D+A Y   + N FNG+++P I +++ D
Sbjct: 323 TVRLGGSTCLSGDVIGEYKFRQLPEYGDLLMFGDMAIYTTCKNNTFNGMSLPNIWLRHAD 382

Query: 349 GTIKAIREFSYNDYYNNL 366
            T++ + EF Y D+   L
Sbjct: 383 NTMQQLTEFGYMDFKERL 400


>gi|325579300|ref|ZP_08149256.1| diaminopimelate decarboxylase [Haemophilus parainfluenzae ATCC
           33392]
 gi|325159535|gb|EGC71669.1| diaminopimelate decarboxylase [Haemophilus parainfluenzae ATCC
           33392]
          Length = 416

 Score =  239 bits (610), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 61/384 (15%), Positives = 118/384 (30%), Gaps = 25/384 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +  G+ + + +   G    S  E
Sbjct: 26  GTPLYIYSRATLERHWHAFDSALGEHPHLICYAVKANSNIGILNVMAKLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +              ++   K     + A+          +V++L+     A ++ K   
Sbjct: 86  LERVLAAGGEASKVVFSGVAKSRAEIMRALEVGIRCFNVESVAELHHINQIAGEMGKVAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G    +  E            + G+  H   +  
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVDEAREVYKLATTLPHVKITGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F      + +   +       ++ + LGGG+  T       +P       L +  +
Sbjct: 206 ELQPFLDATDRLIRLIEQLKEDGITLKHLDLGGGLGVTYTDETPPHPSDYAAALLNKLKD 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
              ++I LEPG AI  N   L   V  +     +N  I D+ +   +   L       I 
Sbjct: 266 YEDLEIILEPGRAITANAGILVAKVQYLKSNESRNFAITDTGMNDMIRPALYEAYMNIIE 325

Query: 283 PNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +           V G  C   D  G+      +  GD I+      Y  +  + +N   
Sbjct: 326 IDRTLEREKTIYDVVGPVCETSDFLGKQRELA-IAEGDYIAQRSAGAYGASMSSNYNSRP 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362
                + + D      R  + ++ 
Sbjct: 385 RTAEVLVDGDKAHLIRRRENLSEL 408


>gi|282881312|ref|ZP_06289992.1| carboxynorspermidine decarboxylase [Prevotella timonensis CRIS
           5C-B1]
 gi|281304788|gb|EFA96868.1| carboxynorspermidine decarboxylase [Prevotella timonensis CRIS
           5C-B1]
          Length = 441

 Score =  239 bits (610), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 118/377 (31%), Positives = 192/377 (50%), Gaps = 16/377 (4%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y+++++KL  NL    ++   A V+++LA K +A W  F    +Y+  TT+SSL E +
Sbjct: 65  PIYILEEEKLRRNLQLIRHVATTADVEIILAFKAYALWKTFPIFREYIHATTASSLNEAL 124

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKIGLRI 122
           LG   FG  TH Y+ AY D E++ ++     + FN++SQ  ++   A++   + ++GLRI
Sbjct: 125 LGFHAFGEPTHTYSPAYTDDEMEEIVRCSSHVTFNSLSQYERYHVLARQVQPNVQLGLRI 184

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           NP  S     L +P  P +R G        S   ++ G   H +CE+     F   L +I
Sbjct: 185 NPEYSEVGTDLYNPCAPGTRFGVTADQLPPSLPNDLTGFHCHCHCESG-ADVFQRTLAHI 243

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNT 241
           E++F H+  ++ WI+ GGG   T +DY V      L+ F +++   Q+ LEPG A    T
Sbjct: 244 EEKFSHWFDELSWINFGGGHLMTRQDYDVDLLIALLQNFKQRHPHLQVILEPGSAFAWQT 303

Query: 242 -TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY-----------PNTGPYT 289
              +   V  +  +     IV+ S   H+PD L      TI                 + 
Sbjct: 304 GVLVAQVVDVVENHGIRTAIVNVSFTCHMPDCLEMPYQPTIRNATTLAPKSQNHTEKKHV 363

Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349
             + G SCL+GD  G++ F+  +K+G+ + FED+  Y   + N FNGI  P IA+   DG
Sbjct: 364 YRIGGNSCLSGDFMGDWQFDHELKVGENLIFEDMLHYTTVKTNMFNGIAHPAIALLKTDG 423

Query: 350 TIKAIREFSYNDYYNNL 366
           T++ +RE++Y+DY   +
Sbjct: 424 TLQMLREYTYDDYRLRM 440


>gi|154174502|ref|YP_001408878.1| diaminopimelate decarboxylase [Campylobacter curvus 525.92]
 gi|112803741|gb|EAU01085.1| diaminopimelate decarboxylase [Campylobacter curvus 525.92]
          Length = 399

 Score =  239 bits (609), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 63/383 (16%), Positives = 113/383 (29%), Gaps = 21/383 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D   + N  +            +  A+K  +   +   L     G    S+ E
Sbjct: 11  GTPLYVYDFDYITNRYNMLKDAFSARKSLICYAVKANSNLSVLKLLASLGAGFDCVSIGE 70

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
           V               +   K  +        D   I   + +++ + +D  +KL+ K  
Sbjct: 71  VRRALLAGAKKYQIILSGVGKRDDELEEALKSDILMINLESEAEMYRLEDITKKLNLKAR 130

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           +  R+NP V              ++ G       +  I           G+ FH   +  
Sbjct: 131 ISIRVNPDVDAKTHPYISTGLNENKFGVDINTAKKMYIHAKNSAALEPVGVHFHIGSQLT 190

Query: 171 SFLCFSAMLKNIEKEFGHFI---TQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224
           +          + +           I++  +GGGI    ++       D+ Q +      
Sbjct: 191 NIEPIIEAAGIVSELMRELKALEIDIKFFDVGGGIGIIYQNETDISLYDYAQGILAKLGG 250

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             V I  EPG  IV N     T+VL       K  +IVD ++   +   L          
Sbjct: 251 QDVTIVCEPGRFIVGNAGYFLTSVLYEKFNKQKRFIIVDGAMNDLIRPSLYGAYHGISVV 310

Query: 284 NTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                     V G  C +GD F +       + GD I  +    Y  +  + +N      
Sbjct: 311 GKNTSAGACDVVGPICESGDFFAKNLNLPACESGDIIVIKSAGAYGFSMSSNYNSRARAA 370

Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364
                        +  ++ D   
Sbjct: 371 EVAVQDKAHRLIRKRENFEDIIA 393


>gi|91227530|ref|ZP_01261867.1| diaminopimelate decarboxylase [Vibrio alginolyticus 12G01]
 gi|91188554|gb|EAS74846.1| diaminopimelate decarboxylase [Vibrio alginolyticus 12G01]
          Length = 417

 Score =  239 bits (609), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 58/378 (15%), Positives = 109/378 (28%), Gaps = 24/378 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +  G+ +TL +   G    S  E
Sbjct: 27  GTPLYVYSRATLERHWKAFDSAVGQHPHLVCYAVKANSNLGVLNTLARLGSGFDIVSGGE 86

Query: 63  V-MLGHEKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +  +       +   ++   K       A+          +  +L +    A +L     
Sbjct: 87  LERVIAAGGDPKKVVFSGVGKTPAEMKRALELGIKCFNVESEPELERLNKVAGELGVIAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           I LRINP V              ++ G       +           NV G+  H   +  
Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAPDVYKFAQSLPNLNVQGIDCHIGSQLT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
           +   F         +  +       I  + +GGG+           P       L     
Sbjct: 207 NIDPFIDATDRLLALIDDLKAQGINIRHLDVGGGLGVVYRDELPPQPSDYAKALLGRLEN 266

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279
              +++  EPG AI  N   L T V  +         I+D+++   +   L         
Sbjct: 267 HQDLELIFEPGRAIAANAGILLTRVEFLKHTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                    T  + G  C  GD  G+      ++ GD ++      Y     + +N    
Sbjct: 327 VSPRKGEAQTYDLVGPICETGDFLGKDRALV-LQEGDLLAVRSAGAYGFVMSSNYNTRTR 385

Query: 340 PTIAVKNVDGTIKAIREF 357
               + +   +    +  
Sbjct: 386 AAEVMVDGKQSHLVRQRE 403


>gi|325135569|gb|EGC58187.1| diaminopimelate decarboxylase [Neisseria meningitidis M0579]
 gi|325201385|gb|ADY96839.1| diaminopimelate decarboxylase [Neisseria meningitidis M01-240149]
 gi|325207366|gb|ADZ02818.1| diaminopimelate decarboxylase [Neisseria meningitidis NZ-05/33]
          Length = 414

 Score =  239 bits (609), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 65/385 (16%), Positives = 127/385 (32%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L    +            +  A+K      +         G    S  E
Sbjct: 18  GTPLYVYSQSALTEAFEHYQTAFAELSPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77

Query: 63  VMLGHEKFGG--ETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G   +T    V   + EI+ A+ +        ++ ++++ +  A +L     
Sbjct: 78  LARVLAAGGDATKTIFSGVGKNEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAS 137

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D +E+           + G+  H   +  
Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLT 197

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                    + I             +E + LGGG+    +D     +  + Q +++    
Sbjct: 198 DLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDENVPDLGAYAQAVQKLIGT 257

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++ LEPG ++V N  +L T V  +     KN V+VD+++   +   L          
Sbjct: 258 RRLKLILEPGRSLVGNAGSLLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317

Query: 284 NTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
            T      TA + G  C  GD  G+       + GD +       Y  +  + +N  N  
Sbjct: 318 ETKDIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNARNRA 376

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + + +      R  +      N
Sbjct: 377 AEVLVDGNEYRLIRRRETLEQQMAN 401


>gi|20808385|ref|NP_623556.1| diaminopimelate decarboxylase [Thermoanaerobacter tengcongensis
           MB4]
 gi|20516997|gb|AAM25160.1| Diaminopimelate decarboxylase [Thermoanaerobacter tengcongensis
           MB4]
          Length = 445

 Score =  239 bits (609), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 67/400 (16%), Positives = 137/400 (34%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ID++ L  N        K    G +++ A K F    +   + +   G    S 
Sbjct: 29  GTPLYVIDEELLRQNCRAFYNGFKRDYPGNEVIYASKAFMTMAICKIIEEENLGLDVVSG 88

Query: 61  YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH-- 115
            E+       F  E   ++     ++  I A+ ++   II +   +LN   + A+K++  
Sbjct: 89  GELYTALKAGFPPEKIYFHGNNKSREELIMALENDIGKIIVDNWHELNMLNELARKMNKV 148

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
             I +R++P +           +  S+ G            +  +  +  N+ GL  H  
Sbjct: 149 PNIYIRVSPGIEAHTHQYVKTGQIDSKFGFPLFNGDAMRAIEYALTLKNVNLVGLHSHIG 208

Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            +      + A ++ +             ++E + LGGG      +       +++    
Sbjct: 209 SQIFDSYSYKAEIEIMMNFIKLIKEFLGWEVEELDLGGGFGIAYTEEDDPQPIEKIAHEM 268

Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            +              +I +EPG +I+ N  T   TV  I E       V     +  ++
Sbjct: 269 MQSVKEYSVSLNVKMPKIIVEPGRSIIGNAGTTLYTVGAIKEIPGIRKYVAVDGGMSDNI 328

Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   I  N           + G+ C +GD+         ++ GD ++      
Sbjct: 329 RTALYGAKYEAIVANKARLPRVEKVSIAGKLCESGDMLIWDILLPEIEEGDILAVLSTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           YN +  + +N +  P   + +       +   +Y D    
Sbjct: 389 YNYSMASNYNRLPRPAAVLVSNGQADVIVERETYEDLVRK 428


>gi|260778833|ref|ZP_05887725.1| carboxynorspermidine decarboxylase putative [Vibrio coralliilyticus
           ATCC BAA-450]
 gi|260604997|gb|EEX31292.1| carboxynorspermidine decarboxylase putative [Vibrio coralliilyticus
           ATCC BAA-450]
          Length = 377

 Score =  239 bits (609), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 169/368 (45%), Positives = 247/368 (67%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPY++I++ KL+ NL+ A  +++ +GVKL+LALKCF+ WG+FD +  Y+DGTTSS  +
Sbjct: 6   LKTPYFMINEDKLVENLEKAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LGHE FGGETHAY+V Y + ++  V   CD +IFN+ +QL  ++   +     +GLR
Sbjct: 66  EVKLGHETFGGETHAYSVGYSEDDVRDVADICDKMIFNSQNQLAAYRHIVEGKA-SLGLR 124

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP VSY+   LA+P R FSRLG +         ++++G+MFH NCENK    F  +L +
Sbjct: 125 LNPGVSYAGQDLANPARQFSRLGVQADHIDPEVFEDIDGVMFHMNCENKDVDAFIDLLDS 184

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I ++FGH++ +++W+S+GGG+ FT   Y ++     LK FSEK+ VQ+YLEPGEAI+T T
Sbjct: 185 ISEQFGHYLDKLDWVSMGGGVFFTWPGYDIEKLGLALKAFSEKHGVQMYLEPGEAIITKT 244

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299
           T L  TV+DI EN+K   IVDS+ EAH  D L+Y E A+I    + G +  ++   SCLA
Sbjct: 245 TDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPASILEAVDKGEHEYVIGSCSCLA 304

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F E  F+KP++IG R+   D AGY + + NWFNG+ MP++  +   G I+ + EF Y
Sbjct: 305 GDQFCEASFDKPLEIGQRLHILDSAGYTMVKLNWFNGLRMPSVYCERSGGDIQKLNEFDY 364

Query: 360 NDYYNNLS 367
           +D+  +LS
Sbjct: 365 SDFKRSLS 372


>gi|307943498|ref|ZP_07658842.1| diaminopimelate decarboxylase [Roseibium sp. TrichSKD4]
 gi|307773128|gb|EFO32345.1| diaminopimelate decarboxylase [Roseibium sp. TrichSKD4]
          Length = 424

 Score =  239 bits (609), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 68/388 (17%), Positives = 124/388 (31%), Gaps = 26/388 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  + +            +  A+K  +   +  TL+    G    S  
Sbjct: 25  VGTPFYCYSTATLTRHYEVFSSAFVGIDTLVCYAMKANSNQAVLRTLSDLGAGMDVVSEG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118
           E+          +   ++   K     A   + D       +  +L++    A ++ K  
Sbjct: 85  ELRRARAAGVPADRILFSGVGKTEAEQAYALDEDILCFNVESEPELDQLSRVASQIGKTA 144

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
              LRINP V           +  ++ G   +   E            V+G+  H   + 
Sbjct: 145 RVSLRINPDVDAKTHAKISTGKAENKFGISWRRAREVYAHAAKLPGIQVSGIDMHIGSQI 204

Query: 170 ---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221
              + F      L  +  +       I+ I LGGG+                + Q +K+ 
Sbjct: 205 TELQPFDDAFGRLGELIADLRSDGHAIDHIDLGGGLGIPYVADNDPPPHPDAYAQVVKKH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
            +K   +I  EPG  I  N   L + V+ + E + K+ +IVD+ +   +   L       
Sbjct: 265 VDKLDCKIVFEPGRLIAGNAGILVSKVIYLKEGDDKHFLIVDAGMNDLIRPTLYDAYHEV 324

Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                        TA V G  C  GD   +      ++ GD I+      Y   +   +N
Sbjct: 325 RPVREPADDTPRMTADVVGPVCETGDYLAQLRELPRLQSGDLIAVYSAGAYGAVQSGTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY 363
              +    + N D         S ++  
Sbjct: 385 SRPLIPEVLVNKDEFAVIRPRPSLDEMI 412


>gi|119384752|ref|YP_915808.1| diaminopimelate decarboxylase [Paracoccus denitrificans PD1222]
 gi|119374519|gb|ABL70112.1| diaminopimelate decarboxylase [Paracoccus denitrificans PD1222]
          Length = 421

 Score =  239 bits (609), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 51/390 (13%), Positives = 112/390 (28%), Gaps = 26/390 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+     L  +              +  A+K  +   +   L     G    S  
Sbjct: 25  VGTPVYVYSAATLTRHFKLFQQALAWTDHLVCFAVKANSNIAVLKLLGDLGAGMDIVSGG 84

Query: 62  EVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116
           E          GE   ++     +     A+          +  +L      A    +  
Sbjct: 85  EYARARAAGVPGERIVFSGVGKLEPEMRMALEGGIRQFNVESEPELELLSRVASSMGVEA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            I +R+NP V           +  ++ G       E            V G+  H   + 
Sbjct: 145 PIAVRVNPDVDARTHEKIATGKSENKFGIPIARAREVYAHAARLPGIKVVGIDMHIGSQL 204

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221
                +      +    +       +I  + +GGG+    +           + Q +++ 
Sbjct: 205 TDLEPYRQAYAKMAELTRALRADGHRITRLDMGGGLGIPYRRDNNAPPLPIEYGQVIRDA 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                 +I +EPG  I  N   L ++V+ + +   ++ +I+D+++   +   +       
Sbjct: 265 VGDLGCEIEIEPGRNIAGNAGILLSSVIYLKQGEGRDFLILDAAMNDLIRPAMYSAHHDI 324

Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +               V G  C  GD F +      +  GD ++      Y     + +N
Sbjct: 325 VPVREAAPGAEVAPHDVVGPVCETGDTFQKAVELPALGPGDLVALRSAGAYGAVMASEYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              +    + + D         +  +    
Sbjct: 385 SRPLVPEVLVSADQFAVIRARPTLEEMLGR 414


>gi|148262316|ref|YP_001229022.1| diaminopimelate decarboxylase [Geobacter uraniireducens Rf4]
 gi|146395816|gb|ABQ24449.1| diaminopimelate decarboxylase [Geobacter uraniireducens Rf4]
          Length = 417

 Score =  239 bits (609), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 58/385 (15%), Positives = 116/385 (30%), Gaps = 22/385 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P Y+  +  L  +              +  ++K  +   +         G    S  
Sbjct: 25  VGSPVYIYSQATLERHFKAMDEAFAAVPHTICYSVKANSNLAVVKNFINLGGGVDIVSGG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118
           E+          +   Y+   K  +      N         +  +L +  + A ++ KK 
Sbjct: 85  ELYRALKAGVDPQKVVYSGVGKKDDEIEYALNTGILMFNVESEQELTRISEIASRMGKKA 144

Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCE- 168
           G+  R+NP V              ++ G   +  IE   +        + G+  H   + 
Sbjct: 145 GIAIRVNPDVDPQTHPYITTGLKNAKFGITIERAIEEYRRAKDLPGIEILGIDCHIGSQL 204

Query: 169 --NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSE 223
                F+     LKN+          +++  LGGG+     D            +   ++
Sbjct: 205 TKVTPFVDAIKKLKNVINTLKGMGISLKYFDLGGGLGIQYNDEAPPLPADYGTEILAETK 264

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK-NLVIVDSSVEAHVPDYLLYQES---A 279
              + +  EPG  +V N   L  T L   +  + N +++D+ +       L         
Sbjct: 265 DLGLHLLFEPGRNLVGNAGILVATCLYTKQRDEKNFIMIDAGMNDLARPALYGSYHGVKP 324

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            +    G   A + G  C +GD   +       K GD ++F     Y     + +N    
Sbjct: 325 VVNDQDGVIVADIVGPICESGDFLAKDREVPMFKQGDMMAFMSAGAYGFAMSSSYNSRPR 384

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
               +   D         +  D   
Sbjct: 385 VAEVMVKGDRFEVVRERETVEDLIK 409


>gi|260913224|ref|ZP_05919706.1| diaminopimelate decarboxylase [Pasteurella dagmatis ATCC 43325]
 gi|260632811|gb|EEX50980.1| diaminopimelate decarboxylase [Pasteurella dagmatis ATCC 43325]
          Length = 416

 Score =  239 bits (609), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 66/384 (17%), Positives = 120/384 (31%), Gaps = 25/384 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K      + + + +   G    S  E
Sbjct: 26  GTPLYIYSRATLERHWHAFDKALGKHPHLICFAVKSNPNIAILNVMAKLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +              ++   K     A             +V++L++    A +L K   
Sbjct: 86  LERVLVAGGDANKIVFSGVAKTETEIARALEVGIRCFNVESVAELHRINQVAGELGKVAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G    +  E            + G+  H   +  
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGISVDEAREVYRLASQLPHIKITGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F         + K+      Q++ + LGGG+  T       +P +     L++ S+
Sbjct: 206 ELQPFLDATDRLIVLMKQLKEDSIQLKHLDLGGGLGVTYTDETPPHPTEYASALLEKLSD 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIY 282
              ++I LEPG AI  N   L T V  +  N      IVD+ +   +   L       I 
Sbjct: 266 YPDLEIILEPGRAITANAGILVTKVEYLKHNENRHFAIVDAGMNDMIRPALYQAYMNIIE 325

Query: 283 PN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +      P    V G  C   D  G+      +  GD I+      Y  +  + +N  +
Sbjct: 326 IDRTLARKPQVYDVVGPICETSDFLGKQRTLA-IAEGDYIAQRSAGAYGASMSSNYNSRS 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362
                + + +      R     + 
Sbjct: 385 RTAEVMVDGEQVHLIRRREKLEEL 408


>gi|163803627|ref|ZP_02197492.1| diaminopimelate decarboxylase [Vibrio sp. AND4]
 gi|159172575|gb|EDP57435.1| diaminopimelate decarboxylase [Vibrio sp. AND4]
          Length = 417

 Score =  239 bits (609), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 56/378 (14%), Positives = 106/378 (28%), Gaps = 24/378 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +  G+ + L +   G    S  E
Sbjct: 27  GTPLYVYSRATLERHWKAFDSAVGQHPHLVCYAVKANSNLGVLNALARLGSGFDIVSGGE 86

Query: 63  V-MLGHEKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +  +       +   ++   K       A+          +  +L +    A +L     
Sbjct: 87  LERVIAAGGDAKKVVFSGVGKTPAEMKRALELGIKCFNVESEPELERLNKVAGELGVVAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           I LRINP V              ++ G                   NV G+  H   +  
Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAPAVYQFAQSLPNLNVQGIDCHIGSQLT 206

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F         +          I  + +GGG+           P       L     
Sbjct: 207 EIEPFIDATDRLLTLIDGLKAQGIDIRHLDVGGGLGVVYRDELPPQPSDYAKALLGRLEN 266

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279
              +++  EPG AI  N   L T V  +         I+D+++   +   L         
Sbjct: 267 HQDLELIFEPGRAIAANAGILLTRVEFLKHTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            +          + G  C  GD  G+      ++ GD ++      Y     + +N    
Sbjct: 327 VVPREGETQNYDLVGPICETGDFLGKDRALA-LQEGDLLAVRSAGAYGFVMSSNYNTRTR 385

Query: 340 PTIAVKNVDGTIKAIREF 357
               + + + +    +  
Sbjct: 386 AAEVMVDGNQSHLVRQRE 403


>gi|262402317|ref|ZP_06078878.1| carboxynorspermidine decarboxylase putative [Vibrio sp. RC586]
 gi|262351099|gb|EEZ00232.1| carboxynorspermidine decarboxylase putative [Vibrio sp. RC586]
          Length = 377

 Score =  238 bits (608), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 163/368 (44%), Positives = 242/368 (65%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPY++ID+ KL+ NL+ A ++++ +GVK++LALKCF+ WG+FD +  Y+DGTTSS  +
Sbjct: 6   LKTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG+E FGGETHAY+V Y + ++  V+  CD +IFN+ SQL  ++   +     +GLR
Sbjct: 66  EVKLGYETFGGETHAYSVGYSEDDVKEVIDICDKMIFNSQSQLAAYRHLVEGKA-SLGLR 124

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP VSY+   LA+P R FSRLG +     E     ++G+MFH NCENK    F  +L  
Sbjct: 125 INPGVSYAGQDLANPARQFSRLGVQADHIDEGVFDTIDGVMFHMNCENKDVDAFIGLLDA 184

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I + FG ++ +++W+SLGGG+ FT   Y V      LK F+E+++VQ+YLEPGEA++T T
Sbjct: 185 ISERFGRYLDKLDWVSLGGGVFFTWPGYDVDKLGAALKAFAERHAVQLYLEPGEAVITKT 244

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299
           T L  TV+DI EN     IVDS+ EAH  D L+Y+E A++    + G +  ++   SCLA
Sbjct: 245 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASDNGQHEYVIGSCSCLA 304

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F    F++P+++G ++   D AGY + + NWFNG+ MP++  +  +G I+ I +F Y
Sbjct: 305 GDQFCVAKFDEPLQVGQQLHILDSAGYTMVKLNWFNGLKMPSVYCERQNGEIQKINQFGY 364

Query: 360 NDYYNNLS 367
            D+   LS
Sbjct: 365 EDFKRTLS 372


>gi|171910232|ref|ZP_02925702.1| diaminopimelate decarboxylase [Verrucomicrobium spinosum DSM 4136]
          Length = 433

 Score =  238 bits (608), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 62/401 (15%), Positives = 122/401 (30%), Gaps = 39/401 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  K+ + ++              +  A+K  +   +  T+     G    S  E
Sbjct: 26  GTPLYVYSKETITDHYKRLDGALDRLDHLICYAVKANSNLAILQTIADLGGGFDIVSGGE 85

Query: 63  V-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117
           +  +           +    K                   + ++L +  + A  L     
Sbjct: 86  LYRVIQAGGRASQCTFAGVGKTRAEIEYALQQGIYSFNAESEAELRQINEVAGTLGKKAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE--------IKNVNGLMFHNNCEN 169
           + LR+NP+V           +  ++ G      +++           ++ GL  H   + 
Sbjct: 146 VALRVNPNVDAKTHKYISTGKSENKFGVDFDRILDAYAAIATECEHLDIRGLQMHIGSQL 205

Query: 170 KSFLCFSAMLKNIEKEFGHFI--TQIEWISLGGGIHFTDK-------------------D 208
            S   F    K +            I++ S+GGG+    +                    
Sbjct: 206 TSIDPFVEAAKKVAPLVEKLKERHHIKFFSIGGGLGIVYRESLDSGDQTWWGEKEEAERP 265

Query: 209 YPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEA 267
             ++ +   L    E   ++I LEPG  +V N   L + VL + + N K  VIVD+ +  
Sbjct: 266 LTIQSYADALVPILEPLKLRILLEPGRFMVGNAGALLSKVLYLKKGNAKKFVIVDAGMND 325

Query: 268 HVPDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323
            +   L          +           V G  C  GD   +     PV+ GD ++    
Sbjct: 326 LIRPALYEGWHQITPLHKAEGAELEKVDVVGPICETGDFLAQDRELPPVQAGDTLAVLSA 385

Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             Y     + +N   +    + +           + +D   
Sbjct: 386 GAYGFTMASNYNSRPLAAEILVDGAEAHLVRERQTLDDLVR 426


>gi|315635221|ref|ZP_07890498.1| diaminopimelate decarboxylase [Aggregatibacter segnis ATCC 33393]
 gi|315475967|gb|EFU66722.1| diaminopimelate decarboxylase [Aggregatibacter segnis ATCC 33393]
          Length = 416

 Score =  238 bits (608), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 58/384 (15%), Positives = 115/384 (29%), Gaps = 25/384 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K      + + + +   G    S  E
Sbjct: 26  GTPLYVYSRATLERHWHAFNNAFGEHPHLVCFAVKSNPNIAILNIMAKLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +              ++   K  +  A     N       + ++L +    A        
Sbjct: 86  LERVLAAGGDAAKVVFSGVAKSRQEIARALEVNIRCFNVESEAELLRINQIAGEMGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G   +   E            + G+  H   +  
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVEQAREVYKLAATLPNIKIVGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F   +     + ++       ++ + LGGG+  T       +P +      ++ S 
Sbjct: 206 ELQPFLDAVDRLIVLMEQLNQDGIHLKHLDLGGGLGVTYTDETPPHPTEYAKALWEKLSA 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
              ++I +EPG AI  N   L T V  +     +N  I D+ +   +   L       + 
Sbjct: 266 FSELEIIVEPGRAITANAGILVTKVEYLKSNESRNFAIADAGMNDMIRPALYQAYMNILE 325

Query: 283 PNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +           V G  C   D  G+      +  GD ++      Y  +  + +N   
Sbjct: 326 IDRTLAREEKIYDVVGPICETSDFLGKQRKLA-IAEGDYLAQRSAGAYGASMSSNYNSRP 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362
                + + D      R  + N+ 
Sbjct: 385 RTAEVMVDGDKAYLIRRREALNEL 408


>gi|168704235|ref|ZP_02736512.1| diaminopimelate decarboxylase [Gemmata obscuriglobus UQM 2246]
          Length = 437

 Score =  238 bits (608), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 67/405 (16%), Positives = 129/405 (31%), Gaps = 43/405 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L+ NL+      ++A   +  ++K      +   + Q+  G   +S  E
Sbjct: 26  GTPLYVYSEAALVANLNEVQTAFRDANPVICYSVKANGNLSICRLMGQHGSGFDVTSQGE 85

Query: 63  VMLGHEKFGG--ETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKL--HKK 117
                +      +     V   D EI+  L N        +  +L+     AQKL     
Sbjct: 86  FQRALKAGPAAAKVVFAGVGKTDSEIEFALKNGVFLFDVESEQELHAIGAVAQKLGVKAD 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           + LR+NP +     +  D +    + G   +  ++           +V GL  H      
Sbjct: 146 VALRVNPDLPPKTHVKTDTSVKGVKFGLDIETIVDVAKGVVGHPGLSVVGLHMHLGSPIL 205

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
               +    +      K+F      I+++++GGG     +     P   F   +    ++
Sbjct: 206 KADPYRMGAEKGLGLIKQFRAQGHDIKYLNMGGGFGINYRKDEAKPASAFADVILPVVKE 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQES----- 278
              Q+ LEPG  IV N   L + V+       K+ VI D+++   +   L          
Sbjct: 266 SGCQLILEPGRFIVGNAAVLLSRVVFTKSTGGKHYVIQDAAMNDLIRPTLYGSFHRIWPV 325

Query: 279 -------------------ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319
                                       +   V G  C +GD   +      +  GD ++
Sbjct: 326 APAAGVPVTPDVNGDPDDPQPFREMPNCFKQDVVGPVCESGDYLAKDRPLPGLTRGDLLA 385

Query: 320 FEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
                 Y +   + +N        + +        R  ++ D   
Sbjct: 386 VFSAGAYGMTMSSNYNSRCRAAEVLVSGRTHRLIRRRETFADLVA 430


>gi|327313487|ref|YP_004328924.1| carboxynorspermidine decarboxylase [Prevotella denticola F0289]
 gi|326946094|gb|AEA21979.1| carboxynorspermidine decarboxylase [Prevotella denticola F0289]
          Length = 388

 Score =  238 bits (608), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 115/375 (30%), Positives = 199/375 (53%), Gaps = 14/375 (3%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y++++ +L +NL    ++   AGV+++LA K +A W  F    +Y+  TT+SSLYE  
Sbjct: 14  PMYVLEEARLRDNLALIAHVANEAGVEIILAFKAYALWRTFPIFREYIKATTASSLYEAR 73

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI--GLRI 122
           LG E+FG  TH ++  Y D EID +      ++FN+++Q  ++  + +  ++++  GLR+
Sbjct: 74  LGFEEFGAPTHTFSPGYTDYEIDEIARCSSHLVFNSLTQYERYHIRTRLENERLSLGLRV 133

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           NP  S  + ++ +P  P +R G       +    +++G   H +CE+ S   F   L +I
Sbjct: 134 NPEYSEVETLIYNPCAPGTRFGISSDRLPDRLPDDIDGFHIHCHCESGS-DVFERTLAHI 192

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNT 241
           E++F  +  Q++W++ GGG   T KDY V    + L++F  +Y   ++ LEPG A    T
Sbjct: 193 EEKFAGWFPQLKWVNFGGGHLMTRKDYDVPRLIRTLRDFKRRYPWLKVILEPGSAFAWQT 252

Query: 242 TTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPN---------TGPYTAM 291
             L   V+D+ E+      V + S   H+PD L       +             G +T  
Sbjct: 253 GPLVAQVVDVVEDHGIKTAVLNVSFTCHMPDCLEMPYHPAVRNACLADEDGSAKGEHTYR 312

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
           +   SCL+GD  G + F+  ++ G+ I FED+  Y   + N FNGI+ P IA+ + D  +
Sbjct: 313 LGANSCLSGDWMGSWTFDHALQAGENIIFEDMLHYTTVKTNMFNGISHPAIALLHPDNEL 372

Query: 352 KAIREFSYNDYYNNL 366
           + +RE++Y DY + +
Sbjct: 373 EVLREYTYEDYRDRM 387


>gi|311109535|ref|YP_003982388.1| diaminopimelate decarboxylase [Achromobacter xylosoxidans A8]
 gi|310764224|gb|ADP19673.1| diaminopimelate decarboxylase 2 [Achromobacter xylosoxidans A8]
          Length = 430

 Score =  238 bits (608), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 57/388 (14%), Positives = 127/388 (32%), Gaps = 26/388 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+  +  L    ++         V +   +K  +   +     +   G    S  
Sbjct: 38  LGTPLYVYSRAALKAAWESYRNAVGQHPVLVCYGMKANSNLAVLKEFARLGAGFDIVSGG 97

Query: 62  EVMLGH-EKFGGETHAYNV-AYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKL--HK 116
           E+              ++    +  E+ A L+         + ++L +  + A  +    
Sbjct: 98  ELKRALAAGADPSRIVFSGVGKQAWEMRAALAAQVKCFNVESEAELRRLSEVAHGMGLRA 157

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            + LR+NP V              ++ G   +  ++           ++ G+  H   + 
Sbjct: 158 PVSLRVNPDVDAQTHPYISTGLKENKFGIAIESALDVYRSAQSLPGLDIVGVDCHIGSQL 217

Query: 170 KSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY- 225
                +   L+   ++ ++      +I  + LGGG+     D         L    E+  
Sbjct: 218 TDISPYFDALEKLLDLIEKLDQAGIRIAHLDLGGGLGIRYTDEIPPSPQVLLDRVFERLN 277

Query: 226 -----SVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQES- 278
                 +Q+ LEPG ++V N   L T V  +  +  +N  IVD+++   +   L      
Sbjct: 278 ARGFGHLQLVLEPGRSLVGNAGVLLTRVQYLKHSEARNFAIVDAAMNDLLRPALYEAFHG 337

Query: 279 --ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                          + G  C + D   +      ++ GD ++ E    Y++   + +N 
Sbjct: 338 VRPVHPRAGDATLYDIVGPVCESADWLAKQRKLA-IEQGDLLAVESTGAYSMAMASNYNA 396

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364
                 A+ + D      +  + +D   
Sbjct: 397 RPRAAEAMVDGDKYYVVRQRETLDDLLR 424


>gi|218709932|ref|YP_002417553.1| carboxynorspermidine decarboxylase [Vibrio splendidus LGP32]
 gi|218322951|emb|CAV19128.1| carboxynorspermidine decarboxylase [Vibrio splendidus LGP32]
          Length = 383

 Score =  238 bits (608), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 168/368 (45%), Positives = 241/368 (65%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPY++I++ KL+ NL+ A  +++ +GVKL+LALKCF+ WG+FD +  Y+DGTTSS  Y
Sbjct: 12  LKTPYFMINEDKLIANLEKAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPY 71

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LGHE FGGETHAY+V Y + ++  V   CD +IFN+ SQL  ++   +     +GLR
Sbjct: 72  EVKLGHETFGGETHAYSVGYSEDDVREVADICDKMIFNSQSQLAAYRHIVEGKA-SLGLR 130

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP VSY+   LA+P R FSRLG +           +NG+MFH NCENK    F  +L +
Sbjct: 131 LNPGVSYAGQDLANPARQFSRLGVQADHIKPELFDEINGVMFHMNCENKDVDAFIGLLDS 190

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I ++FG  + +++W+S+GGG+ FT   Y ++     LK FSEK+ VQ+YLEPGEAI+T T
Sbjct: 191 ISEQFGEHLDKLDWVSMGGGVFFTWPGYDIEKLGLALKAFSEKHGVQMYLEPGEAIITKT 250

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299
           T L  TV+DI EN+K   IVDS+ EAH  D L+Y E A++      G +  ++   SCLA
Sbjct: 251 TDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPASVLEASENGSHDYVIGSCSCLA 310

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F E  F++P+ IG ++   D AGY + + NWFNG+ MP+I  +  +G ++ + EF Y
Sbjct: 311 GDQFCEVSFDEPLNIGQKLHLLDSAGYTMVKLNWFNGLKMPSIYCERSNGDVQKLNEFGY 370

Query: 360 NDYYNNLS 367
            D+  +LS
Sbjct: 371 EDFKRSLS 378


>gi|302346428|ref|YP_003814726.1| carboxynorspermidine decarboxylase [Prevotella melaninogenica ATCC
           25845]
 gi|302150386|gb|ADK96647.1| carboxynorspermidine decarboxylase [Prevotella melaninogenica ATCC
           25845]
          Length = 388

 Score =  238 bits (608), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 123/375 (32%), Positives = 203/375 (54%), Gaps = 14/375 (3%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y++++ +L  NL+   ++ K A V+++LA K +A W  F    +Y+  TT+SSL+E  
Sbjct: 14  PMYVLEEARLRENLNLIAHVAKEADVEIILAFKAYALWRTFPIFREYIKATTASSLFEAR 73

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IGLRI 122
           LG E+FG  TH ++  Y D EID +      ++FN+++Q  +F  +A+  ++K   GLR+
Sbjct: 74  LGFEEFGAPTHTFSPGYTDYEIDDIARCSSHLVFNSLTQYERFHVRAKIENEKLSFGLRV 133

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           NP  S  + ++ +P  P +R G       E+  ++++G   H +CE+ S   F   L +I
Sbjct: 134 NPEYSEVETLIYNPCAPGTRFGISSDKLPETLPEDIDGFHIHCHCESGS-DVFERTLVHI 192

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNT 241
           E++F  +  Q++WI+ GGG   T KDY VK     L+ F ++Y   ++ LEPG A    T
Sbjct: 193 EEKFAKWFPQLKWINFGGGHLMTRKDYDVKRLIHVLRGFRKRYPWLKVILEPGSAFAWQT 252

Query: 242 TTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT---------GPYTAM 291
             L   V+DI E+      + ++S   H+PD L      TI             G YT  
Sbjct: 253 GPLVVQVVDIVEDHGIKTAILNASFTCHMPDCLEMPYHPTIRNAKLVDEDGSAKGEYTYR 312

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
           +   SCL+GD  G + F   +++G+ I FED+  Y   + N FNGI+ P IA+ + D  +
Sbjct: 313 LGANSCLSGDWMGSWDFGHTLEVGENIIFEDMLHYTTVKTNMFNGISHPAIALLHTDNEL 372

Query: 352 KAIREFSYNDYYNNL 366
           + +RE++Y DY + +
Sbjct: 373 EMLREYTYEDYRDRM 387


>gi|268678856|ref|YP_003303287.1| diaminopimelate decarboxylase [Sulfurospirillum deleyianum DSM
           6946]
 gi|268616887|gb|ACZ11252.1| diaminopimelate decarboxylase [Sulfurospirillum deleyianum DSM
           6946]
          Length = 401

 Score =  238 bits (608), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 61/384 (15%), Positives = 113/384 (29%), Gaps = 22/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP YL D   + +       + K     +  A+K  +   +   +     G    S+ E
Sbjct: 12  GTPLYLYDFDSITHKFSALKDVFKARKSLICFAVKSNSNLSVLKHMAHLGAGCDCVSIGE 71

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKAQKLHKKIG 119
           V              ++   K  +        D +     +  ++ + +  AQKL     
Sbjct: 72  VKRALLAGIPKYKIIFSGVGKRDDEIEEALRNDILMLNLESEEEMKRVEIIAQKLGVVAR 131

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           +  R+NP++              ++ G   +      I        +  G+ FH   +  
Sbjct: 132 ISIRVNPNIDPKTHPYISTGLHENKFGVDIESAKRMYIHAKNSASLDPVGIHFHIGSQIT 191

Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
               F      +             I++  +GGGI    K+     + D+ Q +      
Sbjct: 192 DVNPFKEAADVLANLVRNLKALKIDIKFFDVGGGIGIQYKEEETIALYDYAQSIFAALGG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             V +  EPG  +V +     T VL    N  K  VIVD ++   +   L     A    
Sbjct: 252 LDVTLVCEPGRYLVGDCGYFLTKVLYEKYNGFKRFVIVDGAMNDLIRPSLYQAYHAIEVE 311

Query: 284 NTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                      V G  C +GD   +      ++  D +  +    Y     + +N     
Sbjct: 312 GKEGTEKSLCDVVGPVCESGDFLAKNIELPALEHDDILVVKSAGAYGFTMSSNYNTRMRV 371

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
                         R  ++ D   
Sbjct: 372 AEVALENGEDRLIRRRETFEDVIA 395


>gi|156972658|ref|YP_001443565.1| diaminopimelate decarboxylase [Vibrio harveyi ATCC BAA-1116]
 gi|156524252|gb|ABU69338.1| hypothetical protein VIBHAR_00310 [Vibrio harveyi ATCC BAA-1116]
          Length = 417

 Score =  238 bits (608), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 57/378 (15%), Positives = 109/378 (28%), Gaps = 24/378 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  + +            +  A+K  +  G+ + L +   G    S  E
Sbjct: 27  GTPLYVYSRATLERHWNAFDSAVGQYPHLVCYAVKANSNLGVLNALARLGSGFDIVSGGE 86

Query: 63  V-MLGHEKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +  +       +   ++   K       A+          +  +L +    A +L     
Sbjct: 87  LERVIAAGGDAKKVVFSGVGKTPAEMKRALELGIKCFNVESEPELERLNKVAGELGVVAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           I LRINP V              ++ G                   NV G+  H   +  
Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAPAVYKFAQSLPNLNVQGIDCHIGSQLT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F         +  +       I  + +GGG+           P       L     
Sbjct: 207 EIEPFIDATDRLLALIDDLKAQGINIRHLDVGGGLGVVYRDELPPQPSDYAKALLGRLEN 266

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279
              +++  EPG AI  N   L T V  +         I+D+++   +   L         
Sbjct: 267 HQDLELIFEPGRAIAANAGILLTRVEFLKHTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                   +T  + G  C  GD  G+      ++ GD ++      Y     + +N    
Sbjct: 327 VSPREGEAHTYDLVGPICETGDFLGKDRALV-LQEGDLLAVRSAGAYGFVMSSNYNTRTR 385

Query: 340 PTIAVKNVDGTIKAIREF 357
               + + + +    +  
Sbjct: 386 AAEVMVDGNQSHLVRQRE 403


>gi|291549276|emb|CBL25538.1| carboxynorspermidine decarboxylase [Ruminococcus torques L2-14]
          Length = 405

 Score =  238 bits (608), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 126/379 (33%), Positives = 200/379 (52%), Gaps = 15/379 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           IKTP Y++D++ L+ N      + +  G K+LLA K F+ +  +     Y+ GT +S LY
Sbjct: 24  IKTPCYILDEKALIENAKLLGEVAERTGCKMLLAQKAFSNYDCYPFFEPYLAGTEASGLY 83

Query: 62  EVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           E  LG E+  G E H +   Y+  E + +L   D I+FN+ SQL +F   A++  K +GL
Sbjct: 84  EARLGAEEMAGKEVHVFCAGYRADEFEELLQYADHIVFNSPSQLLRFGRMAKEAGKSVGL 143

Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSFL 173
           RINP  S      + DP    SR+G       E+ +KN      ++G+ FH  CE  S  
Sbjct: 144 RINPECSTQEGHEIYDPCAQGSRMGTTRVQWDEAIVKNPELMELLDGVHFHTLCEQDSDD 203

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
                L +++K+FG  I +++WI+ GGG H T   Y ++   Q ++   E++ V++YLEP
Sbjct: 204 -LETTLASVKKQFGDLIAKVKWINFGGGHHITRPGYDIERLEQCIRMAQEEWKVEVYLEP 262

Query: 234 GEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287
           GEA   N   L T+VLD+       + IVD+S   H+PD L       +   +       
Sbjct: 263 GEAWALNAGFLLTSVLDVLKNGDTQIAIVDASAACHMPDVLEMPYRPPLLGASDETTDSG 322

Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
            T  + G +CL+GD+ G++ F K  + GD + F D+A Y   + N FNG+++P I +++ 
Sbjct: 323 ITVRLGGPTCLSGDVIGDYKFSKLPEYGDLLLFGDMAIYTTCKNNTFNGMSLPDIWIRHA 382

Query: 348 DGTIKAIREFSYNDYYNNL 366
           D T++ +  F Y D+   L
Sbjct: 383 DRTMQQLTAFDYTDFKERL 401


>gi|84500205|ref|ZP_00998471.1| diaminopimelate decarboxylase [Oceanicola batsensis HTCC2597]
 gi|84392139|gb|EAQ04407.1| diaminopimelate decarboxylase [Oceanicola batsensis HTCC2597]
          Length = 421

 Score =  238 bits (608), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 54/390 (13%), Positives = 116/390 (29%), Gaps = 26/390 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+YL     L  +              +  A+K  +   +  TL     G    S  
Sbjct: 25  VGTPFYLYSTATLTRHFQLFDDALSGLPHLVCYAMKAASNQAILRTLADLGAGMDVVSGG 84

Query: 62  EVMLGHE-KFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116
           E          GE   ++   K      +A+          +  +L    + A    +  
Sbjct: 85  EYARARAAGVPGERIVFSGVGKTRVEMREALAGGIRQFNIESEPELEALNEVALSMGVVA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-----SEIKNVN--GLMFHNNCEN 169
            + +R+NP V           +  ++ G       E     + +  +   G+  H   + 
Sbjct: 145 PVTVRVNPDVDARTHAKIATGKSENKFGIPISRAREVYARIAALPGLEAIGIDVHIGSQL 204

Query: 170 KSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221
                +    +   ++          I  + LGGG+               D+ + + E 
Sbjct: 205 TDLEPYRQAFEKVGDLTDALRADGHDIRRLDLGGGLGIPYTRGNEPPPLPMDYGKLIAET 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280
                 +I +EPG  +  N   + + V+ +        ++ D ++   +   +       
Sbjct: 265 LGDKGCEIEIEPGRLVAGNAGIMVSRVIYVKSGEGRDFLILDGAMNDLIRPAMYEAHHDI 324

Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +               + G  C +GD F       P++ GD ++F     Y     + +N
Sbjct: 325 VPVVEAEAGIEYRPYDIVGPVCESGDTFARQRMMPPLEAGDLVAFRSAGAYGAVMSSEYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              +    + N           S+++  N 
Sbjct: 385 TRPLIPEVLVNGHQFAVIRPRPSFDEIINR 414


>gi|254230109|ref|ZP_04923505.1| diaminopimelate decarboxylase [Vibrio sp. Ex25]
 gi|262392884|ref|YP_003284738.1| diaminopimelate decarboxylase [Vibrio sp. Ex25]
 gi|151937354|gb|EDN56216.1| diaminopimelate decarboxylase [Vibrio sp. Ex25]
 gi|262336478|gb|ACY50273.1| diaminopimelate decarboxylase [Vibrio sp. Ex25]
          Length = 417

 Score =  238 bits (608), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 57/378 (15%), Positives = 108/378 (28%), Gaps = 24/378 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +  G+ + L +   G    S  E
Sbjct: 27  GTPLYVYSRATLERHWKAFDSAVGQHPHLVCYAVKANSNLGVLNALARLGSGFDIVSGGE 86

Query: 63  V-MLGHEKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +  +       +   ++   K       A+          +  +L +    A +L     
Sbjct: 87  LERVIAAGGDPKKVVFSGVGKTPAEMKRALELGIKCFNVESEPELERLNKVAGELGVIAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           I LRINP V              ++ G       +           NV G+  H   +  
Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAPDVYKFAQSLPNLNVQGIDCHIGSQLT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
           +   F         +  +       I  + +GGG+           P       L     
Sbjct: 207 NIDPFIDATDRLLALIDDLKAQGINIRHLDVGGGLGVVYRDELPPQPSDYAKALLGRLEN 266

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279
              +++  EPG AI  N   L T V  +         I+D+++   +   L         
Sbjct: 267 HQDLELIFEPGRAIAANAGILLTRVEFLKHTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                    T  + G  C  GD  G+      ++ GD ++      Y     + +N    
Sbjct: 327 VSPRTGEAQTYDLVGPICETGDFLGKDRALV-LQEGDLLAVRSAGAYGFVMSSNYNTRTR 385

Query: 340 PTIAVKNVDGTIKAIREF 357
               + +   +    +  
Sbjct: 386 AAEVMVDGKQSHLVRQRE 403


>gi|145634864|ref|ZP_01790572.1| diaminopimelate decarboxylase [Haemophilus influenzae PittAA]
 gi|145268030|gb|EDK08026.1| diaminopimelate decarboxylase [Haemophilus influenzae PittAA]
          Length = 415

 Score =  238 bits (608), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 60/384 (15%), Positives = 115/384 (29%), Gaps = 25/384 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +  G+ + + +   G    S  E
Sbjct: 26  GTPLYVYSRATLERHWHAFDSAFGKRPHLICFAVKSCSNIGVLNIMAKLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +              ++     ++  + A+          +VS+L      A        
Sbjct: 86  LERVLAAGGDASKVVFSGVAKSREEIMRALEVGIRCFNVESVSELKHINQIAGEMGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G    +  E            + G+  H   +  
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVDEAREVYKLASTLPNIKITGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F         + ++       ++ + LGGG+  T       +P       L++   
Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGLGVTYTDETPPHPSDYANALLEKLKN 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
              ++I LEPG AI  N   L   V  +     +N  I D+ +   +   L       I 
Sbjct: 266 YPELEIILEPGRAISANAGILVAKVQYLKSNESRNFAITDTGMNDMIRPALYEAYMNIIE 325

Query: 283 PNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +           V G  C   D  G+      +  GD I+      Y  +  + +N   
Sbjct: 326 IDRTLEREKAIYDVVGPVCETSDFLGKQRELS-IAEGDYIAQCSAGAYGASMSSNYNSRP 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362
                + + D +    R  +  + 
Sbjct: 385 RTAEVLVDGDQSYLIRRRETLQEL 408


>gi|319639010|ref|ZP_07993768.1| diaminopimelate decarboxylase [Neisseria mucosa C102]
 gi|317399914|gb|EFV80577.1| diaminopimelate decarboxylase [Neisseria mucosa C102]
          Length = 406

 Score =  238 bits (607), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 68/385 (17%), Positives = 128/385 (33%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  K  L    D            +  A+K      +         G    S  E
Sbjct: 18  GTPLYVYSKSALTEAFDNYQTAFAALNPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77

Query: 63  VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +       G   +T    V   + EI+ A+ +        ++ ++++ +  A +L K   
Sbjct: 78  LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKVAP 137

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D +E+           + G+  H   +  
Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHASSQSHLKIVGIDCHIGSQLT 197

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                    + I     +       +E + LGGG+    +D     +  + Q +++    
Sbjct: 198 DLSPLIEACERILALVDQLVEEGIVLEHLDLGGGVGIVYQDENVPDLGSYAQAVQKLIGT 257

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++ LEPG ++V N   L T V  +     KN V+VD+++   +   L          
Sbjct: 258 RRLKLILEPGRSLVGNAGALLTRVEFVKHGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317

Query: 284 NTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
            T      TA + G  C  GD  G+       + GD +       Y  +  + +N  N  
Sbjct: 318 ETKDIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGSSMASNYNTRNRA 376

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + +  G     +  +      N
Sbjct: 377 AEVLVDGSGYKLIRQRETVEQQMAN 401


>gi|301155478|emb|CBW14944.1| diaminopimelate decarboxylase, PLP-binding [Haemophilus
           parainfluenzae T3T1]
          Length = 416

 Score =  238 bits (607), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 61/384 (15%), Positives = 118/384 (30%), Gaps = 25/384 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  +  G+ + + +   G    S  E
Sbjct: 26  GTPLYIYSRATLERHWHAFDSALGDHPHLICYAVKANSNIGILNVMAKLGSGFDIVSQGE 85

Query: 63  VMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +    E         ++   K     + A+          +V++L+     A        
Sbjct: 86  LERVLEAGGEASKVVFSGVAKSRAEIMRALEVGIRCFNVESVAELHHINQIAGEMGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G    +  E            + G+  H   +  
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVDEAREVYKLAATLPHVRITGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F      + +   +       ++ + LGGG+  T       +P       L +   
Sbjct: 206 ELQPFLDATDRLIRLIEQLQEDGITLKHLDLGGGLGVTYTDETPPHPSDYAAALLNKLKG 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
             +++I LEPG AI  N   L   V  +     +N  I D+ +   +   L       I 
Sbjct: 266 YENLEIILEPGRAIAANAGILVAKVQYLKSNESRNFAITDTGMNDMIRPALYEAYMNIIE 325

Query: 283 PNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +           V G  C   D  G+      +  GD I+      Y  +  + +N   
Sbjct: 326 IDRTLGREKAIYDVVGPVCETSDFLGKQRELA-IAEGDYIAQRSAGAYGASMSSNYNSRP 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362
                + + D      R  ++++ 
Sbjct: 385 RTAEVLVDGDKAHLIRRRENFSEL 408


>gi|307823078|ref|ZP_07653308.1| diaminopimelate decarboxylase [Methylobacter tundripaludum SV96]
 gi|307735853|gb|EFO06700.1| diaminopimelate decarboxylase [Methylobacter tundripaludum SV96]
          Length = 415

 Score =  238 bits (607), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 63/383 (16%), Positives = 120/383 (31%), Gaps = 24/383 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+  +  L  +              +  A+K  +   + + L +   G    SL E
Sbjct: 26  GSPCYIYSRATLERHWKAFDQAFGEQAHLICYAVKANSNIAILNLLARLGSGFDIVSLGE 85

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +          +   ++     +D  + A+             +L++    A +L     
Sbjct: 86  LERVITAGGDPKKIVFSGVGKREDEILAALKIGIRCFNIEVSGELDRINRLAGQLGVIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNC--- 167
           +  R+NP V              ++ G   +  +    +        V G+  H      
Sbjct: 146 VSFRVNPDVDAKTHPYISTGLKENKFGIDIQQALTEYRRAAAMPHISVIGIDCHIGSQLT 205

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
           E + FL     + ++         ++  + LGGG+    KD    +  + ++    +   
Sbjct: 206 ETRPFLDALDKILDLVAALEAEGIKLHHLDLGGGLGICYKDEQPPEPAEYIQAVLARLGQ 265

Query: 226 -SVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATI-- 281
              +I LEPG AIV N   L T V  +     KN  IVD+++   V   L       I  
Sbjct: 266 TDFEILLEPGRAIVGNAGILVTQVEYLKPTANKNFAIVDAAMNDLVRPALYSAWQNIIPV 325

Query: 282 --YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
               N    T  + G  C  GD  G+      +  GD ++      Y     + +N    
Sbjct: 326 NRQNNAAEATWDIVGPVCETGDFLGKDRTL-KIAQGDLLAIRSSGAYGFTMSSNYNSRPR 384

Query: 340 PTIAVKNVDGTIKAIREFSYNDY 362
               + +           +    
Sbjct: 385 LAELIVDGSNLHVIRERETIAQL 407


>gi|92115227|ref|YP_575155.1| diaminopimelate decarboxylase [Chromohalobacter salexigens DSM
           3043]
 gi|91798317|gb|ABE60456.1| diaminopimelate decarboxylase [Chromohalobacter salexigens DSM
           3043]
          Length = 418

 Score =  238 bits (607), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 61/381 (16%), Positives = 116/381 (30%), Gaps = 24/381 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +     +         +    +  A+K  +   + D L +   G    S  E
Sbjct: 26  GTPCYVYSRATFTRHFKAYSDALGDHPHLICYAVKANSNLAVLDLLARLGAGFDIVSRGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +              ++   K       A+          ++ +L +    A       +
Sbjct: 86  LERVLAAGGDPAKVVFSGVAKQAGEMARALEVGIKCFNVESLPELERLNQVAGECGQVAR 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           + LR+NP V              ++ G    +      +        + GL  H   +  
Sbjct: 146 VSLRVNPDVDAKTHPYISTGLKANKFGIAVDEAFAVYQRAAELPNLEIVGLDCHIGSQLT 205

Query: 171 ---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
               FL     L  +          IE + LGGG+    +D       D+ + L E  + 
Sbjct: 206 ELAPFLDALDRLLILLDRLNEAGITIEHLDLGGGLGVPYQDEQPPAPYDYARALLERLDG 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL--YQESATI 281
             + +  EPG +I  N   + T V  +     ++  IVD+ +   +   L   +Q    +
Sbjct: 266 RDLTLLFEPGRSIAANAGVMLTRVEYLKPGETQHFAIVDAGMNDLIRPALYQAWQRIVPV 325

Query: 282 YPNTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                  T    V G  C  GD  G+      +  GD ++      Y     + +N    
Sbjct: 326 DTRQARETAVYDVVGPVCETGDFLGKARELA-IAPGDLLAVRSAGAYGFVMASHYNSRPR 384

Query: 340 PTIAVKNVDGTIKAIREFSYN 360
           P   + + D         + +
Sbjct: 385 PAELMVDGDNVQVVRERETLD 405


>gi|308069561|ref|YP_003871166.1| diaminopimelate decarboxylase [Paenibacillus polymyxa E681]
 gi|305858840|gb|ADM70628.1| Diaminopimelate decarboxylase (DAP decarboxylase) [Paenibacillus
           polymyxa E681]
          Length = 455

 Score =  238 bits (607), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 70/400 (17%), Positives = 136/400 (34%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++D+Q +       +   +  G   ++  A K F    M     +        S 
Sbjct: 30  GTPLYIVDEQLVRRRCREFIEAFRETGLKFQVAYASKAFCVMAMCALAAEEGMSLDVVSS 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E   ++   K  E   +   +     + ++  +L+  +  A +  ++
Sbjct: 90  GELFTALQAGFPAERIHFHGNNKTPEEIEMALDAQIGCFVVDSEMELHLLQALASEKEQQ 149

Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
             I LR+ P V           +  S+ G            +  IE +  N+ G+  H  
Sbjct: 150 VNILLRVTPGVEAHTHEYMATGQEDSKFGFDIGNGTARQAVEQAIELDHLNLLGVHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQI----EWISLGGGIHFTDKDYPVK----DFCQRL 218
            +      F    + +         Q+    + I+LGGG      +         + Q +
Sbjct: 210 SQIFEVNGFQMAAERVAAFSREIKEQLQFSFKVINLGGGFGIRYTEEDTPLKVSTYVQAI 269

Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            E  + Y         +I++EPG +IV ++ T   TV  I +  +    V     +  + 
Sbjct: 270 GEAVKTYFSGLYDELPEIWIEPGRSIVGDSGTTLYTVGSIKDIPQVRKYVSVDGGMTDNP 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   +      +T   T  + G+ C +GD+         +  GD ++      
Sbjct: 330 RPALYQAKYEAMLANRAQDTNEETVSIAGKCCESGDMLIWDVELPRINSGDLLAVASTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           YN +  + +N I  P +   N       +R  +Y D   N
Sbjct: 390 YNYSMASNYNRIRRPAVVFVNNGEAELVVRRETYEDIVRN 429


>gi|296122026|ref|YP_003629804.1| diaminopimelate decarboxylase [Planctomyces limnophilus DSM 3776]
 gi|296014366|gb|ADG67605.1| diaminopimelate decarboxylase [Planctomyces limnophilus DSM 3776]
          Length = 447

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 59/393 (15%), Positives = 126/393 (32%), Gaps = 31/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++  K  LL+ L             +  ++K  +  G+   +          S  E
Sbjct: 49  GTPCWIYSKAMLLHQLGQIQQAFAAVNPVICFSVKANSNLGILKVMRDAGSSFDVVSGGE 108

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKL--HKK 117
           +              +    K      +      ++F+  +  +L+     A+K+     
Sbjct: 109 LYRVKKAGADTAKVVFAGVGKTDAEIQLALENQILMFDVESEPELDAIAAVAEKMGVIAP 168

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCENK 170
           + LR+NP +           +  ++ G   +         +++    + G+  H      
Sbjct: 169 VALRLNPDIDAKTHAKTTTGKKGNKFGMDIERVFELADKVLKTPRLKLVGIHMHLGSPIL 228

Query: 171 SFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEK 224
           +   +    +      ++      +I W++LGGG   +    +  P  ++ + +    ++
Sbjct: 229 TTEPYELAGQKAIEVTRDLRARGHEIGWVNLGGGFGISYRGSEGLPASEYAKVIVPAVQE 288

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIYP 283
             VQ+ LEPG  I  N   L + V+          VI D+++   +   +          
Sbjct: 289 MGVQLALEPGRFITGNAGILVSEVVYTKREGGKLFVIQDAAMNDLMRPAMYDAFHKIWPV 348

Query: 284 NTGPYT------------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                               V G  C +GD F +  +  PV+ GD IS      Y  +  
Sbjct: 349 KAAAEPANYEGKIEGCEACDVVGPVCESGDYFAKGRYLPPVQRGDLISIFSAGAYGTSMS 408

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           + +N        + +        R  +Y+D   
Sbjct: 409 SNYNSRPRAVELLVDQGHVQVVRRRETYDDLIA 441


>gi|332704148|ref|ZP_08424236.1| diaminopimelate decarboxylase [Desulfovibrio africanus str. Walvis
           Bay]
 gi|332554297|gb|EGJ51341.1| diaminopimelate decarboxylase [Desulfovibrio africanus str. Walvis
           Bay]
          Length = 420

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 68/384 (17%), Positives = 113/384 (29%), Gaps = 22/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  K     +                 ++K  +   +   L     G    S  E
Sbjct: 26  GTPLYVYSKATFSRHFQAFDSAFSALPHITCYSVKANSNLCVLRLLASLGAGMDIVSGGE 85

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +          E   Y+      +    A+ +        +  +L      A +  +   
Sbjct: 86  LHRALKAGVSPEKIVYSGVGKRPEEIRQALDAGILMFNVESREELRTISAIASESGRIAR 145

Query: 120 --LRINPSVSYSKFILADPNRPFSRLG-------EKCKDKIESEIKNVNGLMFHNNCENK 170
             LRINP V              ++ G       E  +           G+  H   +  
Sbjct: 146 ISLRINPDVDPKTHPYISTGMKKNKFGLDMETSLETYRMAKGLPGIEPVGIDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ---RLKEFSEK 224
           S   F   L        +       I ++ LGGG+  T  +            L E  + 
Sbjct: 206 SIEPFLEALDKLVEFYGKLREMGIDIRYLDLGGGLGITYNEEEPPHPEAFGKALTERLKG 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQES---AT 280
             + I LEPG  I  N   L T VL       K+ VIVD+++   V   L          
Sbjct: 266 LPLTIILEPGRVIAGNAGILVTKVLYTKSTPSKDFVIVDAAMNDLVRPSLYGSFHRIAEV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
           +  N       V G  C +GD          V+ G+ ++      Y     + +N     
Sbjct: 326 VEHNRPKINVDVVGPICESGDFLARDRELPNVESGELLAAFSAGAYGFAMSSQYNSRPRA 385

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + + + T+ A R  +Y+D   
Sbjct: 386 AEVMVDGEVTVLARRRETYDDLVA 409


>gi|325860318|ref|ZP_08173440.1| carboxynorspermidine decarboxylase [Prevotella denticola CRIS
           18C-A]
 gi|325482197|gb|EGC85208.1| carboxynorspermidine decarboxylase [Prevotella denticola CRIS
           18C-A]
          Length = 388

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 116/375 (30%), Positives = 198/375 (52%), Gaps = 14/375 (3%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y++++ +L +NL    ++   AGV+++LA K +A W  F    +Y+  TT+SSLYE  
Sbjct: 14  PMYVLEEARLRDNLALIAHVANEAGVEIILAFKAYALWRTFPIFREYIKATTASSLYEAR 73

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI--GLRI 122
           LG E+FG  TH ++  Y D EID +      ++FN+++Q  ++  + +  ++++  GLR+
Sbjct: 74  LGFEEFGAPTHTFSPGYTDYEIDEIARCSSHLVFNSLTQYERYHIRTRLENERLSLGLRV 133

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           NP  S  + ++ +P  P +R G       +    +++G   H +CE+ S   F   L +I
Sbjct: 134 NPEYSEVETLIYNPCAPGTRFGISSDRLPDRLPDDIDGFHVHCHCESGS-DVFERTLAHI 192

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNT 241
           E++F  +  Q++W++ GGG   T KDY V    + L+ F  +Y   ++ LEPG A    T
Sbjct: 193 EEKFAGWFPQLKWVNFGGGHLMTRKDYDVPRLIRTLRNFKRRYPWLKVILEPGSAFAWQT 252

Query: 242 TTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPN---------TGPYTAM 291
             L   V+D+ EN      V + S   H+PD L       +             G +T  
Sbjct: 253 GPLVAQVVDVVENHGIKTAVLNVSFTCHMPDCLEMPYHPAVRNACLADEDGSAKGEHTYR 312

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
           +   SCL+GD  G + F+  ++ G+ I FED+  Y   + N FNGI+ P IA+ + D  +
Sbjct: 313 LGANSCLSGDWMGSWTFDHALQAGENIIFEDMLHYTTVKTNMFNGISHPAIALLHPDNEL 372

Query: 352 KAIREFSYNDYYNNL 366
           + +RE++Y DY + +
Sbjct: 373 EVLREYTYEDYRDRM 387


>gi|328954155|ref|YP_004371489.1| diaminopimelate decarboxylase [Desulfobacca acetoxidans DSM 11109]
 gi|328454479|gb|AEB10308.1| diaminopimelate decarboxylase [Desulfobacca acetoxidans DSM 11109]
          Length = 420

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 54/384 (14%), Positives = 109/384 (28%), Gaps = 22/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP+YL     L ++              +  A+K  +   +         G    S  E
Sbjct: 26  GTPFYLYSHATLQHHFQVFDRAFGETPHLVCFAVKSNSNLAILRIFINQGGGVDIVSGGE 85

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
           +              Y+   K  +                +  +L      A ++ ++  
Sbjct: 86  LFRALRAGVAPGKVVYSGVGKRPDEIRYALEQGILMFNIESPQELQVLNQAAGQMGRRAR 145

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170
             LR+NP V              ++ G              +     + G+  H   +  
Sbjct: 146 IALRVNPDVDPQTHPYISTGLKQNKFGIDIDRSVAEYLIAKQLPHLEIVGVACHIGSQLT 205

Query: 171 SFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEK 224
               F      LK +         QI ++ +GGG+     +       +    + +  + 
Sbjct: 206 QLSPFIETLGRLKELIARLRREDIQIRYLDIGGGLGIQYNEETPPHPVEYGRSIIQELQG 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES---AT 280
               + LEPG  +V N   L T VL   +      I+ D+++       L          
Sbjct: 266 LDCTLILEPGRVLVGNAGILVTKVLFTKQTEAKYFIIADAAMNDLARPSLYGSYHGIQPV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
           +  +    TA + G  C +GD   +         G+ ++      Y     + +N     
Sbjct: 326 VEKDRREVTASLVGPICESGDFLAKDRLMPAFDPGELVAVMSAGAYGFTMSSNYNSRPRV 385

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + + +      +  +Y D   
Sbjct: 386 PEILVHKNEFYVIRQRETYEDLIR 409


>gi|315125206|ref|YP_004067209.1| diaminopimelate decarboxylase [Pseudoalteromonas sp. SM9913]
 gi|315013719|gb|ADT67057.1| diaminopimelate decarboxylase [Pseudoalteromonas sp. SM9913]
          Length = 417

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 60/387 (15%), Positives = 119/387 (30%), Gaps = 26/387 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +     +        ++    +  A+K  +   + + L +   G    S  E
Sbjct: 26  GTPCYVYSRATFERHYLAFANAAQDHKSLVCYAVKANSNIAVLNILARLGAGFDIVSKGE 85

Query: 63  -VMLGHEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQ--KLHKK 117
              +           ++   K  +  A             ++S+L +  + A    L   
Sbjct: 86  LARVIKAGGAANKVVFSGVAKTADEIAYALELGIKCFNVESISELERISEVACELNLDAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           I +R+NP +              ++ G   +  +            N+ G+  H   +  
Sbjct: 146 ISIRVNPDIDAKTHPYISTGLKENKFGIGIETALSVYQHAASLPGLNIVGVDCHIGSQLT 205

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F   L     +  E  +   ++  + +GGG+  T       +P +   Q  +  + 
Sbjct: 206 QTKPFLEALDKLLALIDELKNAGIELSHLDIGGGLGVTYNDEQPPHPSEYAAQVTQRLTN 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
              +++  EPG AI  N   L T V  I +N      +  +    +    LYQ    I P
Sbjct: 266 YRHLELIFEPGRAIAANAGILVTQVEFIKQNQDKYFAIVDAGMNDMLRPSLYQAWQKIIP 325

Query: 284 NT------GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
            +        +   V G  C  GD  G+      +K GD +       Y     + +N  
Sbjct: 326 VSVRDDETPTHNYDVVGPVCETGDFLGKDRPLA-LKQGDLLVQRSAGAYGFTMSSNYNSR 384

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
                 + + +         +    Y 
Sbjct: 385 PRVAEIMVDGEQHHLIRERETIESLYQ 411


>gi|255263324|ref|ZP_05342666.1| diaminopimelate decarboxylase [Thalassiobium sp. R2A62]
 gi|255105659|gb|EET48333.1| diaminopimelate decarboxylase [Thalassiobium sp. R2A62]
          Length = 422

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 58/391 (14%), Positives = 108/391 (27%), Gaps = 27/391 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+YL     LL +              +  A+K  +   +   L     G    S  
Sbjct: 25  VGTPFYLYSAATLLRHFQLFDDALAGVDHLVCFAMKSASNQAILKLLGDAGAGMDVVSGG 84

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E          G    ++   K      +            +  ++      A  L    
Sbjct: 85  EYARARAAGISGNKIVFSGIGKTRAEMEMALTGGIRQFNVESEPEMLALSAVATDLGVVA 144

Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            +  R+NP V           R   + G       E            V G+  H   + 
Sbjct: 145 PITVRVNPDVDAKTHEKIATGRKGDKFGIPISRAREIYAVAAKLPSLKVIGIDVHIGSQL 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVK------DFCQRLKE 220
                F    + +            +I  + LGGG+                 + + + +
Sbjct: 205 TDLAPFKTAYEKVADLTEHLRADGHEISRLDLGGGLGIPYAIGDNDRPPLPAQYGEMIID 264

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESA 279
                  +I +EPG  I  N   L + ++ I        ++ D ++   +   +      
Sbjct: 265 TLGHLGCEIEIEPGRLISGNAGILVSQIIYIKSGEDREFMILDGAMNDLIRPAMYGAHHD 324

Query: 280 TIYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
            I     P         + G  C +GD F +     P+  GD ++F     Y     + +
Sbjct: 325 IIPVIEPPAGVDKTPYDIVGPVCESGDTFAKARDMPPMNAGDLVAFRSAGAYGAVMSSEY 384

Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           N   +    +   D         +Y+D  N 
Sbjct: 385 NTRPLIPEVLVMGDQFAVIRPRPTYDDIINR 415


>gi|326796187|ref|YP_004314007.1| diaminopimelate decarboxylase [Marinomonas mediterranea MMB-1]
 gi|326546951|gb|ADZ92171.1| diaminopimelate decarboxylase [Marinomonas mediterranea MMB-1]
          Length = 417

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 55/382 (14%), Positives = 114/382 (29%), Gaps = 25/382 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +     + +       +    +  A+K  +   + + L +   G    S+ E
Sbjct: 26  GTPTYVYSRATFERHYNAYADAFASHPTLVCYAVKACSNIAILNVLAKLGAGFDIVSIGE 85

Query: 63  V-MLGHEKFGGETHAYNV-AYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +  +           ++    ++     A+          +  +L +    A +L     
Sbjct: 86  LERVVRAGGDPSKVMFSGLGKQEHEMRRALELGIHCFNVESEPELYRLNKVAGELGVKAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           + +R+NP V              ++ G   KD              NV G+  H   +  
Sbjct: 146 VSMRVNPDVDAKTHPYISTGLKENKFGIDIKDAPRIYQVANEMAHLNVMGVDCHIGSQLT 205

Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
               F      +            +I+ + LGGG+    +D    +     +   +K   
Sbjct: 206 ELKPFLDTFDRLITLIDELAGLGIEIKHMDLGGGLGVRYRDEVPPEPADYAQLILDKMKG 265

Query: 228 QIY---LEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIYP 283
           +      EPG +I  N   L T V  +         ++D ++   +   L       +  
Sbjct: 266 RDISLAFEPGRSIAANAGLLLTKVEFLKCTEHKNFAVIDGAMNDLIRPSLYSAWMNIVPV 325

Query: 284 N-----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
           N      G     + G  C  GD  G+      ++ GD ++      Y     + +N  N
Sbjct: 326 NLEATSEGKRIYDLVGPVCETGDFLGKDREL-DIQAGDLLAVRSAGAYGFTMASNYNSRN 384

Query: 339 MPTIAVKNVDGTIKAIREFSYN 360
                + + D           +
Sbjct: 385 RAAEVMVDGDVAHLIREREDID 406


>gi|114764059|ref|ZP_01443298.1| diaminopimelate decarboxylase [Pelagibaca bermudensis HTCC2601]
 gi|114543417|gb|EAU46432.1| diaminopimelate decarboxylase [Roseovarius sp. HTCC2601]
          Length = 421

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 58/392 (14%), Positives = 121/392 (30%), Gaps = 26/392 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+     LL +              +  A+K  +   +  TL +   G    S  
Sbjct: 25  VGTPVYVYSTATLLRHFRLFDEALAWGPHLVCYAMKAASNQAILKTLAEAGAGMDVVSGG 84

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E          G+   ++   K       A+          +  ++    + A +L    
Sbjct: 85  EYARARAAGVPGDRIVFSGVGKTRAEIRTALEGGIRQFNIESEPEMRAISEVASELGVVA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCEN 169
            + +R+NP V           +  ++ G           +        V G+  H   + 
Sbjct: 145 PVTVRVNPDVDAKTHAKIATGKSENKFGIPIAKAREVYAEAAALPGLKVVGIDVHIGSQL 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221
                F+   + + +          +I  + LGGG+               ++   ++  
Sbjct: 205 TELEPFAMAYRKVAELTEALRGDGHEITRLDLGGGLGIPYTRSNEAPPLPVEYGAMIERE 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280
                 +I +EPG  I  N   L + V+ + E   +N +I+D+++   +   +       
Sbjct: 265 LGHLGCEIEIEPGRLIAGNAGILVSEVIYLKEGEGRNFLILDAAMNDLIRPAMYEAHHDI 324

Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +               + G  C +GD F +      +  GD ++F     Y     + +N
Sbjct: 325 VPVIEPEAGLEQSPFDIVGPVCESGDTFAKGRMMPALGAGDLVAFRSAGAYGAVMSSEYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367
              +    +   D      R  S+ +  N  S
Sbjct: 385 TRALIPEVLVKGDQFAVIRRRPSFEEIINRDS 416


>gi|261211745|ref|ZP_05926032.1| carboxynorspermidine decarboxylase putative [Vibrio sp. RC341]
 gi|260839095|gb|EEX65727.1| carboxynorspermidine decarboxylase putative [Vibrio sp. RC341]
          Length = 377

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 164/368 (44%), Positives = 242/368 (65%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPY++ID+ KL+ NL+ A ++++ +GVK++LALKCF+ WG+FD +  Y+DGTTSS  +
Sbjct: 6   LKTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG+E FGGETHAY+V Y + ++  V+  CD +IFN+ SQL  ++   +     +GLR
Sbjct: 66  EVKLGYETFGGETHAYSVGYSEDDVKEVIDICDKMIFNSQSQLAAYRHLVEGKA-SLGLR 124

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP VSY+   LA+P R FSRLG +     E     ++G+MFH NCENK    F  +L  
Sbjct: 125 INPGVSYAGQDLANPARQFSRLGVQADHIDEGVFDTIDGVMFHMNCENKDVDAFIGLLDA 184

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I + FG ++ +++W+SLGGG+ FT   Y V      LK F+E+++VQ+YLEPGEA++T T
Sbjct: 185 ISERFGRYLDKLDWVSLGGGVFFTWPGYDVDKLGAALKAFAERHAVQLYLEPGEAVITKT 244

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY--PNTGPYTAMVCGRSCLA 299
           T L  TV+DI EN     IVDS+ EAH  D L+Y+E A++    + G Y  ++   SCLA
Sbjct: 245 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEACDNGQYEYVIGSCSCLA 304

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F    F++P+++G ++   D AGY + + NWFNG+ MP++  +  +G I+ I +F Y
Sbjct: 305 GDQFCVAKFDEPLQVGRKLHILDSAGYTMVKLNWFNGLKMPSVYCERQNGEIEKINQFGY 364

Query: 360 NDYYNNLS 367
            D+   LS
Sbjct: 365 EDFKRTLS 372


>gi|288927594|ref|ZP_06421441.1| carboxynorspermidine decarboxylase [Prevotella sp. oral taxon 317
           str. F0108]
 gi|288330428|gb|EFC69012.1| carboxynorspermidine decarboxylase [Prevotella sp. oral taxon 317
           str. F0108]
          Length = 390

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 113/377 (29%), Positives = 184/377 (48%), Gaps = 16/377 (4%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y++++ KL  NL+    +   A V+++LA K FA W  F    +Y+  TT+SSL E  
Sbjct: 14  PMYIVEEAKLRRNLELIASVSARAEVEIILAFKAFALWKTFPIFKEYIRSTTASSLSEAK 73

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKIGLRI 122
           L  E+FG   H Y+ AY D EI+ + S    + FN+++Q +++   A  +      GLR+
Sbjct: 74  LAFEEFGSRAHTYSPAYTDDEIEEIASCSSHLTFNSLTQYDRYSTFAKERNASLSFGLRV 133

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           NP  S  +  L +P  P +R G   +        N+ G   H +CE+     F+  L +I
Sbjct: 134 NPEYSEVETELYNPCAPGTRFGLSAERLPSQLPTNIEGFHCHCHCESG-ADVFARTLAHI 192

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNT 241
           E +F  +   ++WI+ GGG   T KDY V+     L+ F E++    + LEPG A    T
Sbjct: 193 ESKFSGWFPALKWINFGGGHLMTRKDYDVELLVDTLRSFKERHPHLHVILEPGSAFAWQT 252

Query: 242 TTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT-----------GPYT 289
             L   V+DI E+      + + S   H+PD L      ++                 + 
Sbjct: 253 GPLVAQVVDIVEDKGIQTAILNVSFTCHMPDCLEMPYQPSVRNAQSLDLEAAVNGGAKHI 312

Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349
             + G SCL+GD  G + F+  + +G+ + FED+  Y   + N FNGI+ P++A+    G
Sbjct: 313 YRLGGNSCLSGDFMGSWQFDHALTVGENVIFEDMIHYTTVKTNMFNGISHPSLAIVRTSG 372

Query: 350 TIKAIREFSYNDYYNNL 366
            ++ +R + Y DY   +
Sbjct: 373 ELEMLRTYGYEDYKARM 389


>gi|149926604|ref|ZP_01914864.1| diaminopimelate decarboxylase [Limnobacter sp. MED105]
 gi|149824533|gb|EDM83749.1| diaminopimelate decarboxylase [Limnobacter sp. MED105]
          Length = 435

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 62/393 (15%), Positives = 115/393 (29%), Gaps = 32/393 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYI-RKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP Y+     +           +  A V +  A+K  +   +   L Q   G    S  
Sbjct: 39  GTPLYVYSASSIKAAYRAYASACQGLAHVTICYAVKANSNIHILKLLAQEGAGFDIVSAG 98

Query: 62  E-VMLGHEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116
           E   +       E   +    K  +                + +++ +    A+KL +  
Sbjct: 99  ELARVIAAGGAPEKAVFAGVGKSMQEIEYALGQGVGCFNVESEAEMERVALVAEKLQRKA 158

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCEN 169
            + LR+NP V              ++ G                   NV+G+  H   + 
Sbjct: 159 NVSLRVNPDVDAKTHPYISTGLKENKFGVSMNAAKRVYQFANAHPWLNVHGIDCHIGSQL 218

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR--------- 217
                +   L  +     +      +I  + LGGGI     D       +          
Sbjct: 219 TDASPYFDALDRVLALLDQLSAEGIEINHLDLGGGIGIRYLDETPPTPAEVLPKLIAKVQ 278

Query: 218 -LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLY 275
              +   +    +  EPG +IV N   L T V  + EN  K+  IVD+++   +   +  
Sbjct: 279 SWAQAKGRSMPTLSFEPGRSIVGNAGVLLTQVEFLKENEGKHFAIVDAAMNDLMRPAMYK 338

Query: 276 QESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                +     P+       V G  C +GD   +      ++ GD ++      Y     
Sbjct: 339 AFHGVVAVQNNPHAAAQEYDVVGPVCESGDWLAKNRTLA-IEQGDYLAILSAGAYGQTMA 397

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           + +N        +          R  +  D   
Sbjct: 398 SNYNSRGRAAEVLLENSKVTLIRRRETIEDQLR 430


>gi|307266020|ref|ZP_07547567.1| diaminopimelate decarboxylase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306918982|gb|EFN49209.1| diaminopimelate decarboxylase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 445

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 71/400 (17%), Positives = 137/400 (34%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ID++ L  N        K    G +++ A K F    +   + +   G    S 
Sbjct: 29  GTPLYVIDEELLRQNCRAFYNGFKKDYPGNEVIYASKAFMTMAICKIIEEENLGLDVVSG 88

Query: 61  YEVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH-- 115
            E+       F  E   ++   K  +  I A+ +N   II +   +LN   D A+K++  
Sbjct: 89  GELYTALKAGFPAEKIYFHGNNKSKEELIMALENNIGRIIVDNWFELNMLNDLAKKMNKV 148

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
             I +R++P V           +  S+ G            +  +  E  N+ GL  H  
Sbjct: 149 PNIYIRVSPGVEAHTHQYVKTGQIDSKFGFPLFNGDAMRAIEYALTLENVNIVGLHSHIG 208

Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            +      + A ++ +             ++  + LGGG      +       +++ +  
Sbjct: 209 SQIFDAESYKAEIEIMMNFLKLVKEFLGWEVGELDLGGGFGIAYVEEDDPQPIEQIAQEI 268

Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            +               I +EPG +I+ N  T   TV  I +       V     +  ++
Sbjct: 269 MQAVKEYSVALNIKMPNIIVEPGRSIIGNAGTTLYTVGAIKDIPGVRKYVAVDGGMSDNI 328

Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   I  N           + G+ C +GD+         ++ GD ++      
Sbjct: 329 RTALYGAKYDAIVANKAKNIKSEKVSIAGKLCESGDMLIWDITLPKIEEGDILAVTCTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           YN +  + +N +  P   + +       +   +Y D   N
Sbjct: 389 YNYSMASNYNRLPRPAAVLVSNGQADIIVARETYEDLIRN 428


>gi|313905630|ref|ZP_07838992.1| carboxynorspermidine decarboxylase [Eubacterium cellulosolvens 6]
 gi|313469577|gb|EFR64917.1| carboxynorspermidine decarboxylase [Eubacterium cellulosolvens 6]
          Length = 432

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 133/428 (31%), Positives = 206/428 (48%), Gaps = 63/428 (14%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y++D++KL  NL     + + AG K+LLA K F+ +  +  + +Y+DG T+S L+
Sbjct: 6   ISTPAYVVDEKKLEENLRILKEVGEQAGCKILLAQKAFSMFAEYPLIGRYLDGATASGLF 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LG EK   E H ++ AYK+ E+D + S CD +IFN+VSQ+ K+  +       +GLR
Sbjct: 66  EARLGAEKMRKENHVFSPAYKEEEMDEIASVCDHVIFNSVSQVRKYAGRPSCAETSLGLR 125

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESE------IKNVNGLMFHNNCENKSFLCF 175
           +NP  S  +  + DP   FSRLG   +   +           ++GL  H  CE  S    
Sbjct: 126 VNPECSTQEHGIYDPCASFSRLGVTVEKLEKELAEDDGFWSKISGLHCHTLCEQNS-DAL 184

Query: 176 SAMLKNIEKEFGHFI--TQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
              ++ +E++FG ++   QI W++LGGG H T  DY  +   + ++   E Y V++YLEP
Sbjct: 185 EVTVEALEEKFGKYLQSPQIRWLNLGGGHHITRADYDRERLIRIVRRLRETYQVEVYLEP 244

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT-------- 285
           GEAI  N   L T VLD  +N    +++D+S   H+PD L       +            
Sbjct: 245 GEAIALNAGYLVTEVLDEVDNGLTTLLLDASAACHMPDVLEMPYQPPLQGAEQVPRIENL 304

Query: 286 --------------------------------------------GPYTAMVCGRSC--LA 299
                                                            +    SC  LA
Sbjct: 305 ADLRALEKRGMKTVAPDREQEDASCGMNPSRVADSASGDNSNLGEEKAYVYRLSSCTCLA 364

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD+ G++ F+ PV+ GDR+ FED+A Y++ + N FNG+ +P+I     DG    +++F Y
Sbjct: 365 GDVIGDYCFDHPVRPGDRLYFEDMAIYSMVKNNTFNGMALPSIWRMKPDGECVLVKKFGY 424

Query: 360 NDYYNNLS 367
            D+   LS
Sbjct: 425 EDFKGRLS 432


>gi|269961537|ref|ZP_06175900.1| diaminopimelate decarboxylase [Vibrio harveyi 1DA3]
 gi|269833766|gb|EEZ87862.1| diaminopimelate decarboxylase [Vibrio harveyi 1DA3]
          Length = 417

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 57/378 (15%), Positives = 108/378 (28%), Gaps = 24/378 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  + +            +  A+K  +  G+ + L +   G    S  E
Sbjct: 27  GTPLYVYSRATLERHWNAFDSAVGEHPHLVCYAVKANSNLGVLNALARLGSGFDIVSGGE 86

Query: 63  V-MLGHEKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +  +       +   ++   K       A+          +  +L +    A +L     
Sbjct: 87  LERVIAAGGDAKKVVFSGVGKTPAEMKRALELGIKCFNVESEPELERLNKVAGELGVVAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           I LRINP V              ++ G                   NV G+  H   +  
Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAPAVYKFAQSLPNLNVQGIDCHIGSQLT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F         +  +       I  + +GGG+           P       L     
Sbjct: 207 EIEPFIDATDRLLALIDDLKAQGINIRHLDVGGGLGVVYRDELPPQPSDYAKALLGRLEN 266

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279
              +++  EPG AI  N   L T V  +         I+D+++   +   L         
Sbjct: 267 HQDLELIFEPGRAIAANAGILLTRVEFLKHTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                    T  + G  C  GD  G+      ++ GD ++      Y     + +N    
Sbjct: 327 VAPREGEAQTYDLVGPICETGDFLGKDRALV-LQEGDLLAVRSAGAYGFVMSSNYNTRTR 385

Query: 340 PTIAVKNVDGTIKAIREF 357
               + + + +    +  
Sbjct: 386 AAEVMVDGNQSHLVRQRE 403


>gi|260753687|ref|YP_003226580.1| diaminopimelate decarboxylase [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|258553050|gb|ACV75996.1| diaminopimelate decarboxylase [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
          Length = 421

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 69/388 (17%), Positives = 132/388 (34%), Gaps = 26/388 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG---VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP Y+     L             AG     +  A+K   +  +  +  +   G    S
Sbjct: 26  GTPCYVYSHSYLTERARRFTKALDGAGKGKALVAFAVKANPSQAILASFAKEGLGADVVS 85

Query: 60  LYEV-MLGHEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
             E+    H     E   ++   K  +    A+          +VS++    + A  L K
Sbjct: 86  AGEIHRAVHAGIPPERIVFSGVGKTAEEMRYALEIGIGQFNIESVSEIEMLAEVATSLGK 145

Query: 117 K--IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNC 167
           K  + LRINP V           +  ++ G   +D + +  K        + G+  H   
Sbjct: 146 KAAVALRINPDVDPHTHAKIATGKADTKFGIAAEDALSAYEKLASYPSLKIQGIASHIGS 205

Query: 168 ENK---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC-----QRLK 219
           +      F   +  +  I          IE   LGGG+    KD   +        + +K
Sbjct: 206 QITDLAPFEAAAERIYEIITALEKAGHTIETADLGGGLGVRYKDDQPEPPSIEAYGEMIK 265

Query: 220 EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES 278
             ++ ++ ++  EPG +++ N   L + V+ + E+     ++ D+++   V   L     
Sbjct: 266 RVTKGWNCRLIFEPGRSLIANAGILLSKVIRVKESKTARFVILDAAMNDLVRPTLYDAYH 325

Query: 279 AT--IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
               + P+   Y A + G  C  GDIF        VK  D ++      Y     + +N 
Sbjct: 326 EIKAVTPSVQAYQADIVGPVCETGDIFAGNRSIPAVKPDDLVAIMSAGAYGATMASAYNS 385

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +    + + + +    +  S  D   
Sbjct: 386 RPLVAEVMVSGNKSALIRKRQSVEDLMR 413


>gi|312795814|ref|YP_004028736.1| Diaminopimelate decarboxylase [Burkholderia rhizoxinica HKI 454]
 gi|312167589|emb|CBW74592.1| Diaminopimelate decarboxylase (EC 4.1.1.20) [Burkholderia
           rhizoxinica HKI 454]
          Length = 420

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 56/386 (14%), Positives = 119/386 (30%), Gaps = 27/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L +              K+  A+K  +   + +   +   G    S  E
Sbjct: 27  GTPLYVYSRAALTDAYQAYAGACTGRRAKVHYAVKANSNLAVLNVFARLGAGFDIVSGGE 86

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +              ++           A+ +        ++++L +    A +  +   
Sbjct: 87  LARVLAAGGKPHDVVFSGVGKNAADMRMALEAGVRCFNVESLAELARLNQIAGESGRIAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G    D   +           + G+  H   +  
Sbjct: 147 ISLRVNPDVDAKTHPYISTGLKANKFGVAFDDARAAYRTALGMKHVRIAGIDCHIGSQIT 206

Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               +   +  + +   +       I+ I +GGG+     D    +    +K   + +  
Sbjct: 207 EISPYLDAIDKVLELVAQVEADGAPIDHIDVGGGLGIRYDDETPPNIGTFVKTILDHFDR 266

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                 +I+ EPG ++V N   L T V  +    +K+  IVD+++       +     A 
Sbjct: 267 RGHGHREIWFEPGRSLVGNAGILLTRVEYLKPGAVKHFAIVDAAMNDLARPAMYDAYHAI 326

Query: 281 ----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                     P T  + G  C +GD          ++ GD ++      Y     + +N 
Sbjct: 327 DAVAPRDGRPPVTYDIVGPVCESGDWLARDRSLA-LEPGDLLAIRSTGAYGFVMSSNYNT 385

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDY 362
                  + + +    A R  +    
Sbjct: 386 RPRAAELLVDGEQVHVARRRETLAQL 411


>gi|322379176|ref|ZP_08053569.1| diaminopimelate decarboxylase [Helicobacter suis HS1]
 gi|322379661|ref|ZP_08053980.1| diaminopimelate decarboxylase [Helicobacter suis HS5]
 gi|321147923|gb|EFX42504.1| diaminopimelate decarboxylase [Helicobacter suis HS5]
 gi|321148407|gb|EFX42914.1| diaminopimelate decarboxylase [Helicobacter suis HS1]
          Length = 641

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 64/386 (16%), Positives = 118/386 (30%), Gaps = 25/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP+YL D Q L           K     +  ALK  +   +  TL +   G    SLYE
Sbjct: 15  KTPFYLYDLQGLTQVFLDFKEAFKGHKSLICYALKANSNLKILQTLAKEGAGADCVSLYE 74

Query: 63  VMLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTI-IFNTVSQLNKFKDKAQKLHKKIG 119
           V              ++     + EI   L          + ++L + +  A +      
Sbjct: 75  VQRALLAGIPAYKIIFSGAGKLEEEIKEALRLKILFLNVESFAELKRIEQIASEQKTPAR 134

Query: 120 LRI--NPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           + +  NP++              ++ G + K+ ++       S      GL  H   +  
Sbjct: 135 ISVRLNPNIDAITHPYISTGLFENKFGVEEKEAVQIFMFAKQSPFLEPVGLHCHIGSQLN 194

Query: 171 SFLCFSAML---KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR------LKEF 221
           +            ++ +        ++++ +GGG+         +           +K+ 
Sbjct: 195 NLEPLRQACMKLADLARFLMASGIDLKFLDVGGGLGVDYSQEQDQTIIALDDYSEAIKQA 254

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESAT 280
            +     I  EPG  I+     L T V  I     K   IVD+ +   +   L       
Sbjct: 255 FKGLDCTIICEPGRRIIAPNGVLITRVQYIKHRAHKCFAIVDAGMNDFLRPALYQASHPI 314

Query: 281 IYPNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                      T  + G  C + D F +      ++ GD I+F     Y  +  + +N  
Sbjct: 315 KVLKEQTPTQKTYDIVGPVCESADCFAKSMLLPEIQEGDLIAFYQAGAYGSSMASRYNSR 374

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYY 363
                     +G         + D  
Sbjct: 375 PQILELGITKEGISVLREREDFLDLI 400


>gi|325982948|ref|YP_004295350.1| diaminopimelate decarboxylase [Nitrosomonas sp. AL212]
 gi|325532467|gb|ADZ27188.1| diaminopimelate decarboxylase [Nitrosomonas sp. AL212]
          Length = 417

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 60/385 (15%), Positives = 120/385 (31%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L            N    +  A+K  +   + +   Q   G    S  E
Sbjct: 29  GTPCYVYSRSALTKAYQAFDTAFANRDHLICFAVKANSNIAILNLFAQLGSGFDIVSGGE 88

Query: 63  V-MLGHEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +  +           ++   K      +    N       + ++L      A+ + K   
Sbjct: 89  LQRVIKAGGDPGKTVFSGVGKSRYEMRMALEVNILCFNVESEAELIALNRIAKDMDKLAP 148

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           + LRINP V              ++ G   ++                 GL  H   +  
Sbjct: 149 VSLRINPDVDAKTHPYISTGLKENKFGIPAREAERIYKSAHLYPNIRFIGLDCHIGSQLT 208

Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
               F    K +            +IE + LGGG+     D     + D+   L   + +
Sbjct: 209 ELEPFMQASKKMLHLLDSLQAQNLEIEHLDLGGGLGIRYNDEILPSISDYVSALCINTHQ 268

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESATIYP 283
              ++ +EPG ++V N   L T +  +     +N  IVD+++   +   L       +  
Sbjct: 269 IKQRLLIEPGRSLVGNAGILLTRIEYLKHTPARNFAIVDAAMNDLMRPALYDAYHEILPV 328

Query: 284 NTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
           +          + G  C  GD  G       +  G+ ++      Y ++  + +N     
Sbjct: 329 HKNSGEIKDYQIVGPVCETGDFLGHDRRIGLID-GNLLAIMSAGAYGMSMSSNYNSRPRA 387

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + + D T    +  + +  + N
Sbjct: 388 AEIMVDKDTTHIIRQRETIDQLFAN 412


>gi|56552664|ref|YP_163503.1| diaminopimelate decarboxylase [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|13124113|sp|Q9Z661|DCDA_ZYMMO RecName: Full=Diaminopimelate decarboxylase; Short=DAP
           decarboxylase
 gi|4378171|gb|AAD19416.1| diaminopimelate decarboxylase [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|56544238|gb|AAV90392.1| diaminopimelate decarboxylase [Zymomonas mobilis subsp. mobilis
           ZM4]
          Length = 421

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 68/388 (17%), Positives = 128/388 (32%), Gaps = 26/388 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG---VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP Y+     L             AG     +  A+K   +  +  +  +   G    S
Sbjct: 26  GTPCYVYSHSYLTERARRFTKALDGAGKGKSLVAFAVKANPSQAILASFAKEGLGADVVS 85

Query: 60  LYEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
             E+    H     E   ++   K  +    A+          +VS++    + A  L K
Sbjct: 86  AGEIRRAVHAGIPPERIVFSGVGKTAEEMRYALEIGIGQFNIESVSEIEMLAEVATSLGK 145

Query: 117 K--IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNC 167
           K  + LRINP V           +  ++ G   +D + +  K        + G+  H   
Sbjct: 146 KAAVALRINPDVDPHTHAKIATGKADTKFGIAAEDALSAYEKLASYPSLKIQGIASHIGS 205

Query: 168 ENK---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC-----QRLK 219
           +      F   +  +  I          IE   LGGG+    KD   +        + +K
Sbjct: 206 QITDLAPFEAAAERIYEIITALEKAGHAIETADLGGGLGVRYKDDQPEPPSVEAYGEMIK 265

Query: 220 EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES 278
             ++ ++ ++  EPG +++ N   L + V+ I E+     ++ D+++   V   L     
Sbjct: 266 RVTKGWNCRLIFEPGRSLIANAGVLLSKVIRIKESKTARFVILDAAMNDLVRPTLYDAYH 325

Query: 279 ATIYPNTGPYTAM--VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                     T    + G  C  GDIF        VK  D ++      Y     + +N 
Sbjct: 326 EIKAVTPSAQTYQADIVGPVCETGDIFARNRSISAVKADDLMAIMSAGAYGATMASAYNS 385

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +    + + + +    +  S  D   
Sbjct: 386 RPLVAEVMVSGNKSALIRKRQSVEDLMR 413


>gi|261379373|ref|ZP_05983946.1| diaminopimelate decarboxylase [Neisseria subflava NJ9703]
 gi|284797820|gb|EFC53167.1| diaminopimelate decarboxylase [Neisseria subflava NJ9703]
          Length = 406

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 67/385 (17%), Positives = 128/385 (33%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  K  L    +            +  A+K      +         G    S  E
Sbjct: 18  GTPLYVYSKSALTEAFENYQTAFSALNPLVCYAVKANGNLNIIKHFASLGSGFDIVSGGE 77

Query: 63  VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +       G   +T    V   + EI+ A+ +        ++ ++++ +  A +L K   
Sbjct: 78  LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKVAP 137

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D +E+           + G+  H   +  
Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHVSLQSHLKIVGIDCHIGSQLT 197

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                    + I     +       +E + LGGG+    +D     +  + Q +++    
Sbjct: 198 DLSPLIEACERILALVDQLADEGIVLEHLDLGGGVGIVYQDENVPDLGAYAQAVQKLIGT 257

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++ LEPG ++V N   L T V  +     KN V+VD+++   +   L          
Sbjct: 258 RRLKLVLEPGRSLVGNAGALLTRVEFVKHGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317

Query: 284 NTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
            T      TA + G  C  GD  G+       + GD +       Y  +  + +N  N  
Sbjct: 318 ETKDIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGSSMASNYNTRNRA 376

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + +  G     +  +      N
Sbjct: 377 AEVLVDGSGYKLIRQRETVEQQMAN 401


>gi|311068934|ref|YP_003973857.1| diaminopimelate decarboxylase [Bacillus atrophaeus 1942]
 gi|310869451|gb|ADP32926.1| diaminopimelate decarboxylase [Bacillus atrophaeus 1942]
          Length = 439

 Score =  238 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 66/399 (16%), Positives = 131/399 (32%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   +     +       AG   ++  A K F++  M     +        S 
Sbjct: 30  GTPLYVYDVALIRERAKSFQQAFTAAGLRAQVAYASKAFSSVAMIQLAQEEGLSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK- 116
            E+       F  E   ++     ++    A+  +   I+ +   +++  ++  ++    
Sbjct: 90  GELYTAISAGFPAERIHFHGNNKSREELQMALEYHIGCIVVDNFYEISLIEELCKESGYT 149

Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
             + LRI P V           +  S+ G            +  + S    + G+  H  
Sbjct: 150 VDVLLRITPGVEAHTHDYITTGQEDSKFGFDLNNGQTERAIEQILPSNHIRLLGVHCHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQI----EWISLGGGIHFTDKDYPVKDFC------- 215
            +      F    + I  +   +        + ++LGGG      +              
Sbjct: 210 SQIFDTAGFVLAAEKIFTKLDEWRESYSFISKVLNLGGGFGIRYTEEDEPLPATVYVEKI 269

Query: 216 -QRLKEFSEKYSV---QIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
            + +K  +E+YS    +I++EPG ++V +  T   TV    E    +    VD  +  ++
Sbjct: 270 IEAVKANAERYSFSIPEIWIEPGRSLVGDAGTTLYTVGAQKEVPGTRRYAAVDGGMSDNI 329

Query: 270 PDYLLYQESATI----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   I           T  + G+ C +GD+         VK GD ++      
Sbjct: 330 RPALYQAKYEAISANRIEEEHNTTVSIAGKCCESGDMLIWDIDLPEVKAGDLLAVFCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  N +N I  P +           I+  +Y D   
Sbjct: 390 YGYSMANNYNRIPRPAVVFVEDGEAHLVIKRETYEDIVK 428


>gi|292493805|ref|YP_003529244.1| diaminopimelate decarboxylase [Nitrosococcus halophilus Nc4]
 gi|291582400|gb|ADE16857.1| diaminopimelate decarboxylase [Nitrosococcus halophilus Nc4]
          Length = 416

 Score =  238 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 65/385 (16%), Positives = 127/385 (32%), Gaps = 24/385 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  + +         ++   +L  A+K  +   + + L +   G    S+ E
Sbjct: 26  GTPCYVYSRAMIEHQWRAFDQAFQDYPHRLCYAVKANSNLAVLNILARLGSGFDIVSVGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++   K  D    A+ +        + ++L    D A KL     
Sbjct: 86  LERVLAAGGDPGQVVFSGVGKRADEMHRALTAGIACFNVESEAELAHLNDIAGKLGRQAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCENK 170
           + LR+NP V              ++ G +    +E     V        G+  H   +  
Sbjct: 146 VSLRVNPDVDARTHPYIATGLRENKFGIEIDQALEVYAHAVTLPYIDILGVDCHIGSQLT 205

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYP---VKDFCQRLKEFSEK 224
           S   F A  + +     +      ++  I LGGG+  T +D      + +   L+E    
Sbjct: 206 SLSPFLAASERVLALVDQLAERGIEVRHIDLGGGLGITYRDEAPPSPQQYATALREKLVG 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESAT--- 280
            ++++++EPG AIV N   L T V  +         IVD+++   +   L          
Sbjct: 266 RNLEVWIEPGRAIVGNGGVLLTRVEYLKHTPHKDFAIVDAAMNDLLRPALYDAWQEIIPV 325

Query: 281 -IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            I  +   +   V G  C  GD  G+      + +G+ +       Y     + +N    
Sbjct: 326 TISTDGKSHLFDVVGPVCETGDFLGKQRHLA-IGVGELLVARAAGAYGFTMSSNYNSRPR 384

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
               + +           +    Y 
Sbjct: 385 AAEVMVDGSKAYLVRERETVESLYA 409


>gi|167036981|ref|YP_001664559.1| diaminopimelate decarboxylase [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|167039692|ref|YP_001662677.1| diaminopimelate decarboxylase [Thermoanaerobacter sp. X514]
 gi|256750624|ref|ZP_05491510.1| diaminopimelate decarboxylase [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|300915059|ref|ZP_07132374.1| diaminopimelate decarboxylase [Thermoanaerobacter sp. X561]
 gi|307724982|ref|YP_003904733.1| diaminopimelate decarboxylase [Thermoanaerobacter sp. X513]
 gi|320115399|ref|YP_004185558.1| diaminopimelate decarboxylase [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
 gi|166853932|gb|ABY92341.1| diaminopimelate decarboxylase [Thermoanaerobacter sp. X514]
 gi|166855815|gb|ABY94223.1| diaminopimelate decarboxylase [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|256750464|gb|EEU63482.1| diaminopimelate decarboxylase [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|300888783|gb|EFK83930.1| diaminopimelate decarboxylase [Thermoanaerobacter sp. X561]
 gi|307582043|gb|ADN55442.1| diaminopimelate decarboxylase [Thermoanaerobacter sp. X513]
 gi|319928490|gb|ADV79175.1| diaminopimelate decarboxylase [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
          Length = 445

 Score =  238 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 71/400 (17%), Positives = 137/400 (34%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ID++ L  N        K    G +++ A K F    +   + +   G    S 
Sbjct: 29  GTPLYVIDEELLRQNCRAFYNGFKKDYPGNEVIYASKAFMTMAICKIIEEENLGLDVVSG 88

Query: 61  YEVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH-- 115
            E+       F  E   ++   K  +  I A+ +N   II +   +LN   D A+K++  
Sbjct: 89  GELYTALKAGFPAEKIYFHGNNKSKEELIMALENNIGRIIVDNWYELNMLNDLAKKMNKV 148

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
             I +R++P V           +  S+ G            +  +  E  N+ GL  H  
Sbjct: 149 PNIYIRVSPGVEAHTHQYVKTGQMDSKFGFPLFNGDAMRAIEYALTLENVNLVGLHSHIG 208

Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            +      + A ++ +             ++  + LGGG      +       +++ +  
Sbjct: 209 SQIFDAESYKAEIEIMMNFLKLVKEFLGWEVGELDLGGGFGIAYVEEDDPQPIEQIAQEI 268

Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            +               I +EPG +I+ N  T   TV  I +       V     +  ++
Sbjct: 269 MQAVKEYSVALNIKMPNIIVEPGRSIIGNAGTTLYTVGAIKDIPGVRKYVAVDGGMSDNI 328

Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   I  N           + G+ C +GD+         ++ GD ++      
Sbjct: 329 RTALYGAKYDAIVANKAKNIKSEKVSIAGKLCESGDMLIWDITLPKIEEGDILAVTCTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           YN +  + +N +  P   + +       +   +Y D   N
Sbjct: 389 YNYSMASNYNRLPRPAAVLVSNGQADIIVARETYEDLIRN 428


>gi|225850923|ref|YP_002731157.1| diaminopimelate decarboxylase [Persephonella marina EX-H1]
 gi|225645958|gb|ACO04144.1| diaminopimelate decarboxylase [Persephonella marina EX-H1]
          Length = 426

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 58/387 (14%), Positives = 121/387 (31%), Gaps = 23/387 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+YL  KQ +L+ +D      +     +  A K  +   +     +   G    S  
Sbjct: 30  VGTPFYLYSKQAILDRIDQYKKAFEEYNTLICYAAKANSNLSILKIFEENDLGLDIVSGG 89

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+       F      Y    K           N  +    +  +++   + A+KL+K +
Sbjct: 90  ELYKAKKAGFPSNKIVYAGVGKTDFELEYAIRENILSFNVESEMEIDVLDELAEKLNKTV 149

Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCEN 169
            +  R+NP V              S+ G    + +    K V        G+  H   + 
Sbjct: 150 RISIRVNPDVDPKTHPYISTGLRKSKFGIDIDEALNVYRKAVKKKNIDVIGIHCHIGSQI 209

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKDF----CQRLKEFS 222
                +   ++              +++   +GGGI    +            + +    
Sbjct: 210 MEISPYVEAVEKTAELVFRLKKEGIELQHFDIGGGIGIRYRPEDNPPTPEDLAKAVIPIV 269

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATI 281
               +++ +EPG +++     L T V+ +     K+ +IVDS +   +   +       +
Sbjct: 270 RTTGLRLIIEPGRSLIGEAGALITQVVFLKNKGDKHFIIVDSGMNDLLRPAMYNAYHHIL 329

Query: 282 YPNTGPYTA--MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       + G  C  GD F        V+  D ++      Y  +  + +N    
Sbjct: 330 SVEKKERKVVADIVGPICETGDFFALDREIDDVQRKDYLAVMSAGAYGSSMSSNYNVRPR 389

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNNL 366
               + + +          Y+ Y   L
Sbjct: 390 AAEVLVSDNSFYLIKEREDYS-YITKL 415


>gi|146343265|ref|YP_001208313.1| diaminopimelate decarboxylase [Bradyrhizobium sp. ORS278]
 gi|146196071|emb|CAL80098.1| diaminopimelate decarboxylase [Bradyrhizobium sp. ORS278]
          Length = 446

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 58/390 (14%), Positives = 104/390 (26%), Gaps = 28/390 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +            V +  A+K  +   +  TL +   G    S  
Sbjct: 50  VGTPFYCYSTATLERHYRVFADAFAGQDVLICYAMKANSNQSVLRTLAKLGAGADVVSGG 109

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118
           E+              ++   K           D   +   +  +L+     A +     
Sbjct: 110 ELKRALAAGIPSRKIVFSGVGKTEAELRAALAADIHCLNIESEPELDLLARLAVETGHTA 169

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCEN 169
              +R+NP V           +  ++ G                +   V G+  H   + 
Sbjct: 170 RISIRVNPDVDAGTHAKISTGKSENKFGIPLDHARRVYARAAKMKGIKVTGVDVHIGSQI 229

Query: 170 KSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEF 221
                     +      +        I  +  GGG+                +   +K  
Sbjct: 230 TDLGPMETAFRILTEFVQTLRADGHDISHVDFGGGLGIPYHMDRAVPPEPAAYAAMVKRV 289

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
           S      +  EPG  IV N   L   V+ +     KN VI+D+++   +    LY+    
Sbjct: 290 SHNLGCTLMFEPGRMIVGNAGILLAKVIYVKHGEAKNFVIIDAAMNDLIRPT-LYEAHHD 348

Query: 281 IYPNTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
           I P            A V G  C +GD             GD ++      Y   +   +
Sbjct: 349 ILPVKQAPPDAPAFVADVVGPVCESGDYLALDRALPEPAPGDLLAIMTAGAYGAVQACTY 408

Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           N   +    +   D                
Sbjct: 409 NTRALVPEVLVKGDQAAVIRPRIEVEQLIA 438


>gi|126734685|ref|ZP_01750431.1| diaminopimelate decarboxylase [Roseobacter sp. CCS2]
 gi|126715240|gb|EBA12105.1| diaminopimelate decarboxylase [Roseobacter sp. CCS2]
          Length = 422

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 58/390 (14%), Positives = 115/390 (29%), Gaps = 26/390 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+     L  +              +  A+K  +   +   L     G    S  
Sbjct: 25  VGTPFYVYSTATLKRHFTLFDEALDWGDHLVCFAMKSLSNQAVIKLLGNAGAGMDVVSGG 84

Query: 62  EVMLGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116
           E +        G+   ++   K  D    A+          +  ++      AQ L    
Sbjct: 85  EYLRAKAAGVPGDRIVFSGVGKTADEMRLAIEGGIRQFNVESEPEMIVLDRVAQSLDAVV 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            I +R+NP V           +  ++ G       E            V G+  H   + 
Sbjct: 145 PITIRVNPDVDAKTHAKIATGKSENKFGIPISRAREVYAMAGAMPGLKVVGIDVHIGSQL 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221
                F A    + +   +      +I+ + LGGG+               D+   ++  
Sbjct: 205 TELAPFEAAYNKVAELTEQLRADGHEIKRLDLGGGLGIPYARSNEAPPLPTDYGALIQRT 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280
                 +I +EPG  I  N   + + V+ +        ++ D ++   +   +       
Sbjct: 265 VGHLGCEIEIEPGRLISGNAGLMVSKVIYVKSGEDREFLILDGAMNDLIRPAMYEAWHDI 324

Query: 281 IYPNTG-----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +          P    + G  C +GD F +      VK  D ++F     Y     + +N
Sbjct: 325 VPVVEPAPGAVPAKYDIVGPVCESGDTFAKGREMPAVKADDLVAFRSAGAYGAVMSSEYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              M    + + D         +Y +    
Sbjct: 385 SRPMIPEVLVDGDQFAVIRPRPTYEEMIAR 414


>gi|326389774|ref|ZP_08211339.1| diaminopimelate decarboxylase [Thermoanaerobacter ethanolicus JW
           200]
 gi|325994256|gb|EGD52683.1| diaminopimelate decarboxylase [Thermoanaerobacter ethanolicus JW
           200]
          Length = 445

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 71/400 (17%), Positives = 137/400 (34%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ID++ L  N        K    G +++ A K F    +   + +   G    S 
Sbjct: 29  GTPLYVIDEELLRQNCRVFYNGFKKDYPGNEVIYASKAFMTMAICKIIEEENLGLDVVSG 88

Query: 61  YEVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH-- 115
            E+       F  E   ++   K  +  I A+ +N   II +   +LN   D A+K++  
Sbjct: 89  GELYTALKAGFPAEKIYFHGNNKSKEELIMALENNIGRIIVDNWFELNMLNDLAKKMNKV 148

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
             I +R++P V           +  S+ G            +  +  E  N+ GL  H  
Sbjct: 149 PNIYIRVSPGVEAHTHQYVKTGQIDSKFGFPLFNGDAMRAIEYALTLENVNIVGLHSHIG 208

Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            +      + A ++ +             ++  + LGGG      +       +++ +  
Sbjct: 209 SQIFDAESYKAEIEIMMNFLKLVKEFLGWEVGELDLGGGFGIAYVEEDDPQPIEQIAQEI 268

Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            +               I +EPG +I+ N  T   TV  I +       V     +  ++
Sbjct: 269 MQAVKEYSVALNIKMPNIIVEPGRSIIGNAGTTLYTVGAIKDIPGVRKYVAVDGGMSDNI 328

Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   I  N           + G+ C +GD+         ++ GD ++      
Sbjct: 329 RTALYGAKYDAIVANKAKNIKSEKVSIAGKLCESGDMLIWDITLPKIEEGDILAVLCTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           YN +  + +N +  P   + +       +   +Y D   N
Sbjct: 389 YNYSMASNYNRLPRPAAVLVSNGQADIIVARETYEDLIRN 428


>gi|261253091|ref|ZP_05945664.1| carboxynorspermidine decarboxylase putative [Vibrio orientalis CIP
           102891]
 gi|260936482|gb|EEX92471.1| carboxynorspermidine decarboxylase putative [Vibrio orientalis CIP
           102891]
          Length = 377

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 171/368 (46%), Positives = 245/368 (66%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPY++I++ KL+ NL+ A  +++ +GVKL+LALKCF+ WG+FD +  Y+DGTTSS  +
Sbjct: 6   LKTPYFMINEDKLIENLEKAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LGHE FGGETHAY+V Y + ++  V   CD +IFN+ SQL  ++   +     IGLR
Sbjct: 66  EVKLGHETFGGETHAYSVGYSEDDVREVADICDKMIFNSQSQLAAYRHIVEGKA-SIGLR 124

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP VSY+   LA+P R FSRLG +         ++++G+MFH NCENK    F  +L +
Sbjct: 125 LNPGVSYAGQDLANPARQFSRLGVQANHIKPEVFEDIDGVMFHMNCENKDVDAFIGLLDS 184

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I ++FG ++ +++WIS+GGG+ FT   Y ++     LK FSEK+ VQ+YLEPGEAI+T T
Sbjct: 185 ISEQFGQYLDKLDWISMGGGVFFTWPGYDIEKLGLALKAFSEKHGVQMYLEPGEAIITKT 244

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299
           T L  TV+DI EN K   IVDS+ EAH  D L+Y E A+I    + G +  ++   SCLA
Sbjct: 245 TDLVVTVVDIVENGKKTAIVDSATEAHRLDTLIYDEPASILEASDNGEHEYVIGSCSCLA 304

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F E  FE+P++IG R+   D AGY + + NWFNG+ MP++  +   G I+ + EF Y
Sbjct: 305 GDQFCEASFEQPLEIGQRLHIMDSAGYTMVKLNWFNGLRMPSVYCERSSGEIQKLNEFDY 364

Query: 360 NDYYNNLS 367
           +D+  +LS
Sbjct: 365 SDFKRSLS 372


>gi|148270405|ref|YP_001244865.1| diaminopimelate decarboxylase [Thermotoga petrophila RKU-1]
 gi|281412712|ref|YP_003346791.1| diaminopimelate decarboxylase [Thermotoga naphthophila RKU-10]
 gi|147735949|gb|ABQ47289.1| diaminopimelate decarboxylase [Thermotoga petrophila RKU-1]
 gi|281373815|gb|ADA67377.1| diaminopimelate decarboxylase [Thermotoga naphthophila RKU-10]
          Length = 386

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 61/375 (16%), Positives = 116/375 (30%), Gaps = 17/375 (4%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  ++ L         + +   +    A+K      +   L +   G    +  E
Sbjct: 12  GTPAYVYFEETLRKRARLVKEVFEGVNLLPTFAVKANNNPVLLRILREEGFGMDVVTKGE 71

Query: 63  VMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +           +  +N   K  D     +      I  ++  ++     +      +  
Sbjct: 72  LFAAKLAGVPSHSVVWNGNGKSVDQMKHFLREGVRIINVDSFEEME-IWKELNPEGVEYF 130

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFHNNCENKSFLCF 175
           +R+NP V               + G   +D           NV GL  H   +      F
Sbjct: 131 IRVNPEVDAKTHPHISTGLKKHKFGIPLEDLDLFMERFGSMNVKGLHVHIGSQITQVEPF 190

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY--PVKDFCQRLKEFSEKYSVQIYLEP 233
                 + +    F    E I++GGG           +  + +++    +++  ++ +E 
Sbjct: 191 VEAFDKVVRASERFG--FEEINIGGGWGINYSGEELDLSSYREKVVPALKRFK-RVIVEI 247

Query: 234 GEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYPNT--GPYTA 290
           G  IV  +  L   V+ + +   K  V+VD  +   +   L                  A
Sbjct: 248 GRYIVAPSGYLLLRVVLVKKRSNKTFVVVDGGMNTLIRPALYSAYHRVFVLGKQGKEVRA 307

Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGT 350
            V G  C +GD+         V+ GD I  E+   Y     N +N    P   +    G 
Sbjct: 308 DVVGPLCESGDVIAYDRELPEVEPGDIIVVENAGAYGYTMSNNYNSTVRPAEVLVGEGGE 367

Query: 351 I-KAIREFSYNDYYN 364
           I    R  +  D + 
Sbjct: 368 ISLIRRRETEMDIFK 382


>gi|118475343|ref|YP_891475.1| diaminopimelate decarboxylase [Campylobacter fetus subsp. fetus
           82-40]
 gi|118414569|gb|ABK82989.1| diaminopimelate decarboxylase [Campylobacter fetus subsp. fetus
           82-40]
          Length = 403

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 66/388 (17%), Positives = 118/388 (30%), Gaps = 25/388 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y  D   + N  +            +  ALK  +   +   +     G    S+ E
Sbjct: 11  GTPLYAYDFDYIQNQYNKLKKEFNARKSLICYALKANSNLSLLKHIADLGAGFDCVSIGE 70

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKAQKLHKKIG 119
           V              Y+   K  E      N D +     +  ++ + +  A+KL+KK  
Sbjct: 71  VKKAILAGAQNYKIIYSGVGKSDEEIEEALNLDILMLNLESEEEMKRVESIAKKLNKKAR 130

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           +  R+NP+V              ++ G   +   +           +  G+ FH   +  
Sbjct: 131 ISVRVNPNVDPKTHPYISTGLSKNKFGVGIEKARKMYLYAHKSEFLDPVGIHFHIGSQLT 190

Query: 171 SFLCFSAMLKNIEKEFGHFI---TQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                      +             I++  +GGGI    ++     +  + Q +    + 
Sbjct: 191 DLKPVIEAANIVSDLLRELKALDIDIKFFDVGGGIGIRYENEKDPDLYGYAQGILAALKG 250

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN------LVIVDSSVEAHVPDYLLYQES 278
             + I  EPG  +V N     T VL    N  +       +IVD ++   +   L     
Sbjct: 251 EDITIICEPGRFLVGNAGVFITKVLYEKINDTHSDDKKRFIIVDGAMNDLLRPSLYEAHH 310

Query: 279 ATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
             I  N+G      V G  C +GD  G+         GD +  +    Y     + +N  
Sbjct: 311 EIIALNSGKKELCDVVGPICESGDFLGKNVNLPKQSSGDILVVKSAGAYGFCMSSNYNSR 370

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYNN 365
                            +  S+ D   N
Sbjct: 371 LRTAEVAVCGGKDRLIRQRESFEDLVKN 398


>gi|114798216|ref|YP_759314.1| putative carboxynorspermidine decarboxylase [Hyphomonas neptunium
           ATCC 15444]
 gi|114738390|gb|ABI76515.1| putative carboxynorspermidine decarboxylase [Hyphomonas neptunium
           ATCC 15444]
          Length = 376

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 115/371 (30%), Positives = 193/371 (52%), Gaps = 7/371 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TP +++D  +L  NL+TA  +R  AG K+LLA K FA    F  +  Y+DGTT+S   
Sbjct: 5   IQTPCFVLDIARLRKNLETAQRVRAEAGCKVLLATKAFAMPAAFPLMRDYLDGTTASGEQ 64

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E ++G E+FG E H Y+ AY + E+  +      I FN+  QL +F D A+     +GLR
Sbjct: 65  EAIMGAEEFGKEVHVYSPAYTEDEVRRLTKVAQHIYFNSAEQLGRFGDIARDAGCHVGLR 124

Query: 122 INPSVSYSKF--ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +NP  S +     L +P  P SR GE     ++     V+    H  CE+        ++
Sbjct: 125 VNPGYSNATLGGDLYNPTAPTSRFGEVPSKLVQVNWSGVDIFHVHALCES-MAEGSVGLI 183

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
           + + + F  ++ Q++ ++ GGG       Y V      + +F  ++ +++ LEPG  +V 
Sbjct: 184 EYVSEHFAPYLEQVKAVNFGGGHFLNKPGYDVDALVGAINKFKARFGIEVVLEPGAGLVV 243

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----YTAMVCGR 295
           NT  L++TVL +  N  +L I+D+S   H+PD L       +     P    +T    G+
Sbjct: 244 NTGELHSTVLALHWNEMDLAILDASASTHMPDVLEVPYRPDVIGAGQPGELAHTYRFGGK 303

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           +C+ GD+ G++ F+KP++ GD I F D   Y+  + N FNG  +  + ++  DG ++ + 
Sbjct: 304 TCMTGDVIGDYSFDKPLEPGDAIIFTDQMHYSFVKTNTFNGTPLANLVIRWEDGRVEQVS 363

Query: 356 EFSYNDYYNNL 366
           +F Y ++   L
Sbjct: 364 DFGYGEFRRRL 374


>gi|1304007|dbj|BAA12662.1| LysA [Bacillus subtilis]
          Length = 441

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 66/399 (16%), Positives = 129/399 (32%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   +     +      +AG   ++  A K F++  M     +        S 
Sbjct: 32  GTPLYVYDVALIRERAKSFKQAFISAGLKAQVAYASKAFSSVAMIQLAEEEGLSLDVVSG 91

Query: 61  YEVMLG-HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115
            E+       F  E   ++     ++    A+      I+ +   ++   +D  ++    
Sbjct: 92  GELYTAVAAGFPAERIHFHGNNKSREELRMALEHRIGCIVVDNFYEIALLEDLCKETGHS 151

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
             + LRI P V           +  S+ G            +  ++SE   + G+  H  
Sbjct: 152 IDVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQTERAIEQVLQSEHIQLLGVHCHIG 211

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQI----EWISLGGGIHFTDKDYPVKDFC------- 215
            +      F    + I K+   +        + ++LGGG      +              
Sbjct: 212 SQIFDTAGFVLAAEKIFKKLDEWRDSYSFVSKVLNLGGGFGIRYTEDDEPLHATEYVEKI 271

Query: 216 -QRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            + +KE + +Y   I   ++EPG ++V +  T   TV    E       V     +  ++
Sbjct: 272 IEAVKENASRYGFDIPEIWIEPGRSLVGDAGTTLYTVGSQKEVPGVRQYVAVDGGMNDNI 331

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +     A         T  + G+ C +GD+         VK GD ++      
Sbjct: 332 RPALYQAKYEAAAANRIGEAHDKTVSIAGKCCESGDMLIWDIDLPEVKEGDLLAVFCTGA 391

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  N +N I  P +           ++  +Y D   
Sbjct: 392 YGYSMANNYNRIPRPAVVFVENGEAHLVVKRETYEDIVK 430


>gi|261885449|ref|ZP_06009488.1| diaminopimelate decarboxylase [Campylobacter fetus subsp.
           venerealis str. Azul-94]
          Length = 403

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 66/388 (17%), Positives = 118/388 (30%), Gaps = 25/388 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y  D   + N  +            +  ALK  +   +   +     G    S+ E
Sbjct: 11  GTPLYAYDFDYIQNQYNKLKKEFNARKSLICYALKANSNLSLLKHIADLGAGFDCVSIGE 70

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKAQKLHKKIG 119
           V              Y+   K  E      N D +     +  ++ + +  A+KL+KK  
Sbjct: 71  VKKAILAGAQNYKIIYSGVGKSDEEIEEALNLDILMLNLESEEEMKRVESIAKKLNKKAR 130

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           +  R+NP+V              ++ G   +   +           +  G+ FH   +  
Sbjct: 131 ISVRVNPNVDPKTHPYISTGLSKNKFGVGIEKARKMYLYAHKSEFLDPVGIHFHIGSQLT 190

Query: 171 SFLCFSAMLKNIEKEFGHFI---TQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                      +             I++  +GGGI    ++     +  + Q +    + 
Sbjct: 191 DLKPVIEAANIVSDLLRELKALDIDIKFFDVGGGIGIRYENEKDPDLYGYAQGILVALKG 250

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN------LVIVDSSVEAHVPDYLLYQES 278
             + I  EPG  +V N     T VL    N  +       +IVD ++   +   L     
Sbjct: 251 EDITIICEPGRFLVGNAGVFITKVLYEKINDTHSDDKKRFIIVDGAMNDLLRPSLYEAHH 310

Query: 279 ATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
             I  N+G      V G  C +GD  G+         GD +  +    Y     + +N  
Sbjct: 311 EIIALNSGEKELCDVVGPICESGDFLGKNVNLPKQSSGDILVVKSAGAYGFCMSSNYNSR 370

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYNN 365
                            +  S+ D   N
Sbjct: 371 LRTAEVAVCGGKDRLIRQRESFEDLVKN 398


>gi|163759920|ref|ZP_02167004.1| probable diaminopimelate dap decarboxylase protein [Hoeflea
           phototrophica DFL-43]
 gi|162282878|gb|EDQ33165.1| probable diaminopimelate dap decarboxylase protein [Hoeflea
           phototrophica DFL-43]
          Length = 422

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 64/389 (16%), Positives = 113/389 (29%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +         +    +  A+K  +   +  TL +   G    S  
Sbjct: 25  VGTPFYCYSTATLTRHYQVFAGAFSDIDSMVCYAMKANSNQAVLKTLAKLGSGVDVVSEG 84

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKD--KAQKLHK 116
           E+              ++   K           D       +  +L        A     
Sbjct: 85  ELRRALAAGIPASRIMFSGVGKTIREMDAALAADIYCFNIESEPELEVLNARALAIGKVA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            I  RINP V           +   + G   +   +            V G+  H   + 
Sbjct: 145 PISFRINPDVDAKTHAKISTGKKEDKFGISWQRARDVYRHAATLPGVKVTGIDMHIGSQI 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221
                F   LK + +           I+   +GGG+    +D          + + +K  
Sbjct: 205 TELQPFDDALKLMIELIGVLRSDGHIIDHFDIGGGLGVPYRDDNTPPPDPDAYGKMVKAR 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESAT 280
                 ++ LEPG  IV N   L T V+ + +   K  VIVD+++   +   L       
Sbjct: 265 LGDLGCKVILEPGRLIVANAGVLVTEVVYVKDGGDKTFVIVDAAMNDLIRPTLYDAWHEV 324

Query: 281 IYPN-----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                         A + G  C +GD   +      VK GD ++      Y   +   +N
Sbjct: 325 RAVRLSAASAPRIRADIVGPVCESGDYLAKDREMAAVKAGDLLAVGSAGAYGAVQAGTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    +   D      +  SY +   
Sbjct: 385 TRPLIPEVLVKDDAFHVVRKRPSYEELIA 413


>gi|222149957|ref|YP_002550914.1| diaminopimelate decarboxylase [Agrobacterium vitis S4]
 gi|221736939|gb|ACM37902.1| diaminopimelate decarboxylase [Agrobacterium vitis S4]
          Length = 423

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 66/389 (16%), Positives = 113/389 (29%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +              +  A+K  +   +  TL Q   G    S  
Sbjct: 25  VGTPFYCYSTATLERHYRVFSEAFDGVDSMVCYAVKANSNQAVLKTLGQLGAGVDVVSEG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E+              ++   K        +          +  +L+    +A K     
Sbjct: 85  ELRRALAAGIPPSRILFSGVGKTPSEMDLGLEVGIYCFNVESEPELDVLNQRALKAGKTA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            +  RINP V           R  ++ G   +       +        V G+  H   + 
Sbjct: 145 HVSFRINPDVDAGTHAKISTGRKENKFGISYERARAVYARAASLEGIKVTGIDMHIGSQI 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPV-----KDFCQRLKEF 221
                F+   K +             I+ + +GGG+    KD          +   +K+ 
Sbjct: 205 TDLQPFAEAFKLLRDLVTTLRAEGHTIDHVDVGGGLGIPYKDDNNPPPDPAAYAAIVKQQ 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                 +I  EPG  IV N   L T V+ + +   K  VIVD+++   +   L       
Sbjct: 265 LASLDCRIVAEPGRLIVGNAGILVTEVIYVKDGGNKTFVIVDAAMNDLIRPTLYDAHHEL 324

Query: 281 I-----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                   +     A V G  C  GD           + GD I+      Y   + + +N
Sbjct: 325 RPVLLSAASAPRIRADVVGPVCETGDYLALDREMSMPRPGDLIAIGSAGAYGAVQSSTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    +   D         SY D   
Sbjct: 385 TRRLVPEVLVKGDQFHVIRPRPSYEDMIR 413


>gi|163748703|ref|ZP_02155956.1| diaminopimelate decarboxylase [Shewanella benthica KT99]
 gi|161331813|gb|EDQ02617.1| diaminopimelate decarboxylase [Shewanella benthica KT99]
          Length = 414

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 56/377 (14%), Positives = 110/377 (29%), Gaps = 23/377 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  +   + + L +   G    S  E
Sbjct: 26  GTPLYIYSRATLERHWHAFDRAVADHPHLICYAVKANSNIAVLNVLARLGSGFDIVSGGE 85

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKA--QKLHKK 117
           ++   E         ++   K      +  N D       + ++L +    A        
Sbjct: 86  LLRVIEAGGEPAKVVFSGVGKTAAEMEMALNLDILCFNVESAAELEQLNIVAGRIGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LRINP V              ++ G   +       +        + G+  H   +  
Sbjct: 146 VSLRINPDVDAGTHPYISTGLKDNKFGIAMEQAEAIFARAAALPNLEIKGVDCHIGSQLT 205

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
               F   +  +             IE   +GGG+  +  D        +   L E    
Sbjct: 206 EIQPFLDAMDRMLALIDRLAEQGIHIEHFDVGGGLGVSYGDETPPQPDVYAAALLERLGS 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQE---SAT 280
             +++  EPG AI  N     T VL +   + K+  +VD ++   +   L          
Sbjct: 266 RKLKLIFEPGRAIAANAGIFVTQVLYLKSNDDKHFALVDGAMNDLIRPALYSAWQNIIPV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              +       + G  C  GD  G+      +  GD ++      Y     + +N     
Sbjct: 326 KPRDGKTLNYDIVGPICETGDFLGKDREL-NLAAGDYLAVCSSGAYGFTMSSNYNSRPRS 384

Query: 341 TIAVKNVDGTIKAIREF 357
              + + +         
Sbjct: 385 AEVMVDGEQAFVIRERE 401


>gi|88604175|ref|YP_504353.1| diaminopimelate decarboxylase [Methanospirillum hungatei JF-1]
 gi|88189637|gb|ABD42634.1| diaminopimelate decarboxylase [Methanospirillum hungatei JF-1]
          Length = 430

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 63/395 (15%), Positives = 131/395 (33%), Gaps = 31/395 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D+ ++ +N    +         +++L A K      +   L Q   G    S 
Sbjct: 29  GTPLYVTDETRIRDNYRGYVSALSDHYPHIRVLYAAKANGNLNIIKILAQEGAGADVFSS 88

Query: 61  YEVMLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116
            E+ +        E   +N  +  + +    +     +  +++ +L +    A +  K  
Sbjct: 89  GELHMALLAGMKPEHLLFNGSSKTEADHRLAVEKGVRVSLDSLDELAQLDRIAGEAGKVV 148

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV-------NGLMFHNNCEN 169
           ++  R+NP++              S+ G    +  ++    +        G+  H   + 
Sbjct: 149 EVSFRVNPAIDVPTHPKIATGLATSKFGIPAAEITDAYAAALACKNVVPVGIHCHIGSQI 208

Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEF 221
                F+   + + +          + +++ LGGG+      +         +   +   
Sbjct: 209 LDVEPFAKEAQVMMEVVEELHRMGVRFKFVDLGGGLGVAYDHFGPDAPTFASYANAVMPV 268

Query: 222 SEK------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY 275
                       +I++EPG ++V ++T L T V  + +  K  V VD+     +   +  
Sbjct: 269 CTSVLRRLGIQPEIWIEPGRSMVCDSTVLLTKVNSVKKAHKTFVNVDAGFNLLIRPAMYD 328

Query: 276 QESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                +  N        T  V G  C  GDI         V  GD I+  D   Y  +  
Sbjct: 329 SYHEVLVANRADEEPAGTYTVTGPICETGDILAHDRKLPGVVAGDLIAVLDAGAYGYSMA 388

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366
           + +NG       +          R  + +D   NL
Sbjct: 389 SQYNGRGRCAEVLVRKGQAELMRRAETIDDLMANL 423


>gi|145638478|ref|ZP_01794088.1| diaminopimelate decarboxylase [Haemophilus influenzae PittII]
 gi|145272807|gb|EDK12714.1| diaminopimelate decarboxylase [Haemophilus influenzae PittII]
 gi|309751609|gb|ADO81593.1| Diaminopimelate decarboxylase [Haemophilus influenzae R2866]
 gi|309973776|gb|ADO96977.1| Diaminopimelate decarboxylase [Haemophilus influenzae R2846]
          Length = 415

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 60/384 (15%), Positives = 115/384 (29%), Gaps = 25/384 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +  G+ + + +   G    S  E
Sbjct: 26  GTPLYVYSRATLERHWHAFDSAFGKRPHLICFAVKSCSNIGVLNIMAKLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +              ++     ++  + A+          +VS+L      A        
Sbjct: 86  LERVLAAGGDASKVVFSGVAKSREEIMRALEVGIRCFNVESVSELKHINQIAGEMGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G    +  E            + G+  H   +  
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVNEAREVYKLASTLPNIKITGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F         + ++       ++ + LGGG+  T       +P       L++   
Sbjct: 206 ELQPFLDAADRLIVLMEQLKEDGITLKHLDLGGGLGVTYTDETPPHPSDYANALLEKLKN 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
              ++I LEPG AI  N   L   V  +     +N  I D+ +   +   L       I 
Sbjct: 266 YPELEIILEPGRAISANAGILVAKVQYLKSNESRNFAITDTGMNDMIRPALYEAYMNIIE 325

Query: 283 PNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +           V G  C   D  G+      +  GD I+      Y  +  + +N   
Sbjct: 326 IDRTLAREKAIYDVVGPVCETSDFLGKQRELS-IAEGDYIAQCSAGAYGASMSSNYNSRP 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362
                + + D +    R  +  + 
Sbjct: 385 RTAEVLVDGDQSYLIRRRETLQEL 408


>gi|294142609|ref|YP_003558587.1| diaminopimelate decarboxylase [Shewanella violacea DSS12]
 gi|293329078|dbj|BAJ03809.1| diaminopimelate decarboxylase [Shewanella violacea DSS12]
          Length = 414

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 58/377 (15%), Positives = 109/377 (28%), Gaps = 23/377 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  +   + + L +   G    S  E
Sbjct: 26  GTPLYIYSRATLERHWHAFDRAVADHPHLICYAVKANSNIAVLNVLARLGSGFDIVSGGE 85

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--K 117
           +              ++   K      +  N         + ++L +    A ++ K   
Sbjct: 86  LQRVIQAGGDPAKVVFSGVGKTAAEMEMALNLGIHCFNVESAAELEQLNIVAGRIGKLAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LRINP V              ++ G   +       +        V G+  H   +  
Sbjct: 146 VSLRINPDVDAGTHPYISTGLKDNKFGIAMEQAEAIFARAAALPNLKVKGVDCHIGSQLT 205

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
               F   +  +             IE   +GGG+     D        +   L E    
Sbjct: 206 EIQPFLDAMDRMLALIDRLAEQGIHIEHFDVGGGLGVPYDDETPPQPAVYAAALIERLGD 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++  EPG AI  N     T VL +     K+  +VD ++   +   L       I  
Sbjct: 266 RKLKLIFEPGRAIAANAGIFVTQVLYLKGNGDKHFALVDGAMNDLIRPALYSAWQNIIPV 325

Query: 284 NTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
           N          + G  C  GD  G+      +  GD ++      Y     + +N     
Sbjct: 326 NPRDGETLNYDIVGPVCETGDFLGKDREL-NLAAGDFLAVRSSGAYGFTMSSNYNSRPRA 384

Query: 341 TIAVKNVDGTIKAIREF 357
              + + +         
Sbjct: 385 AELMVDGEQAYVIRERE 401


>gi|149908508|ref|ZP_01897170.1| diaminopimelate decarboxylase [Moritella sp. PE36]
 gi|149808342|gb|EDM68279.1| diaminopimelate decarboxylase [Moritella sp. PE36]
          Length = 418

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 60/383 (15%), Positives = 113/383 (29%), Gaps = 24/383 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +  +              +  A+K  +   + + L +   G    S  E
Sbjct: 27  GTPTYVYSRATIERHWHAFNDAAGAHPHLVCYAVKANSNIAVLNVLARLGSGFDIVSGGE 86

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           ++             ++   K       A+  N       +  +L +  D A  + +   
Sbjct: 87  LLRVIAAGGDPSKIVFSGVGKTVAEINLALDHNIHCFNVESTPELERINDIALSRGVQAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNCENK 170
           I +R+NP++              ++ G                    + G+  H   +  
Sbjct: 147 ISIRVNPNIDAGTHPYISTGLKENKFGIDIDLAEGVYQVASKMPGIKLKGVDCHIGSQLT 206

Query: 171 SFLCF---SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEK 224
               F      L  +  +       +E + +GGG+             +    LK     
Sbjct: 207 ELSPFLDAVDKLLLLIDKLSAQGIVLEHLDVGGGLGVPYNGETPPQPAEYAQALKAKLAG 266

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + +  EPG AI+ N   L + V  I     KN  IVD+++   +   L     A    
Sbjct: 267 RKLALIFEPGRAIMANAGILVSKVEYIKLTEHKNFAIVDAAMNDLIRPALYSAWQAIAPV 326

Query: 284 NTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
           N           V G  C  GD  G+      + + D I       Y     + +N  + 
Sbjct: 327 NKSLERECLNYDVVGPICETGDFLGKNRDL-TIAMDDYIVVRSAGAYGSTMSSNYNSRSR 385

Query: 340 PTIAVKNVDGTIKAIREFSYNDY 362
           P   + + D      R     + 
Sbjct: 386 PAEVMVDGDVAHLVRRREGLAEI 408


>gi|269104270|ref|ZP_06156966.1| carboxynorspermidine decarboxylase putative [Photobacterium
           damselae subsp. damselae CIP 102761]
 gi|268160910|gb|EEZ39407.1| carboxynorspermidine decarboxylase putative [Photobacterium
           damselae subsp. damselae CIP 102761]
          Length = 374

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 165/368 (44%), Positives = 232/368 (63%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TPY++ID+  LL NL+    ++  +G K++LALKCF+ WG+FDT+  Y+DGTTSS   
Sbjct: 4   LATPYFMIDEAALLKNLERIAQLKALSGAKMVLALKCFSTWGVFDTMKPYLDGTTSSGPL 63

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG E FGGETH Y+V Y   +I+A+    + +IFN++SQL   +  A      IG+R
Sbjct: 64  EVRLGAETFGGETHGYSVGYSQQDIEAINPFVNKLIFNSLSQLENLRKYAAD-GISIGVR 122

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
            NP +SY+   LA+P R +SRLG          +  V G MFH NCEN +F  +  +L+ 
Sbjct: 123 FNPGISYANQDLANPARQYSRLGVSVDKLSSQALVGVEGGMFHMNCENSNFPAYKRILET 182

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I ++FG ++  + W+SLGGG+ FT   YP+++    LK FS+K+ VQIYLEPGEA++T T
Sbjct: 183 ISQQFGPYLDNLNWVSLGGGVSFTSDGYPLEELASLLKWFSDKHGVQIYLEPGEAVITKT 242

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN--TGPYTAMVCGRSCLA 299
           T L  TV+DI EN     IVDS+ EAH  D L+Y ES TI      G Y  ++   SCLA
Sbjct: 243 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYNESGTIREASLDGDYEYIIGSCSCLA 302

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD+F    F++P++IGDR+   D  GY + + NWFNG+ MP+I  + VDG I  + +F Y
Sbjct: 303 GDVFCVAKFDQPLQIGDRLHVMDSGGYTMVKLNWFNGLKMPSIYCRRVDGEIIQLNQFGY 362

Query: 360 NDYYNNLS 367
           +D+   LS
Sbjct: 363 DDFKATLS 370


>gi|304309745|ref|YP_003809343.1| Diaminopimelate decarboxylase (DAP decarboxylase) [gamma
           proteobacterium HdN1]
 gi|301795478|emb|CBL43676.1| Diaminopimelate decarboxylase (DAP decarboxylase) [gamma
           proteobacterium HdN1]
          Length = 422

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 56/388 (14%), Positives = 115/388 (29%), Gaps = 30/388 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+  +  +                 +  A+K  +   + + L +   G    S  
Sbjct: 26  VGTPAYVYSRSAIEQQWLAFDRAFGAHPHLVCFAVKANSNIAVLNLLARLGAGFDIVSEG 85

Query: 62  EVMLG-HEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E+          +   ++           A+          + S+L+     A  L    
Sbjct: 86  ELERVLRAGGDPKKVVFSGVGKQPAEMARALTVGVRCFNVESESELHTLNQVAATLGVKA 145

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCEN 169
            + LR+NP V              ++ G      ++           N+ G+  H   + 
Sbjct: 146 PVSLRVNPDVDAQTHPYISTGLKENKFGIDIDRALQVYRDASELPHINIVGVDCHIGSQL 205

Query: 170 KSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226
                F   L  +             +  + LGGG+    ++         ++    +  
Sbjct: 206 TQLAPFLDALDRVLVLVDALKAEGIALRHLDLGGGLGVCYRNEQPPSPSDYVQALLTRLG 265

Query: 227 VQI---------YLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQ 276
                        LEPG AIV N   L T ++ + E   +   I+D ++   +   L   
Sbjct: 266 QHPEFGKQGIEIILEPGRAIVANAGVLLTRIMGLKETPARKFAIIDGAMNDLIRPALYGA 325

Query: 277 ESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
               +           T  + G  C  GD  G+    + ++ GD ++ +    Y     +
Sbjct: 326 WQEIVAVKERQDSPEATYDIVGPVCETGDFLGKERALR-IQQGDLLAVKSAGAYGFVMSS 384

Query: 333 WFNGINMPTIAVKNVDGTIKAIREFSYN 360
            +N  N     + + +         SY+
Sbjct: 385 NYNTRNRAAEVIVDKEQFHIVRARESYD 412


>gi|15644265|ref|NP_229317.1| diaminopimelate decarboxylase [Thermotoga maritima MSB8]
 gi|8134399|sp|Q9X1K5|DCDA_THEMA RecName: Full=Diaminopimelate decarboxylase; Short=DAP
           decarboxylase
 gi|4982083|gb|AAD36584.1|AE001799_16 diaminopimelate decarboxylase [Thermotoga maritima MSB8]
          Length = 386

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 62/373 (16%), Positives = 116/373 (31%), Gaps = 13/373 (3%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  ++ L         + +   +    A+K      +   L +   G    +  E
Sbjct: 12  GTPTYVYFEETLRKRSRLVKEVFEGVNLLPTFAVKANNNPVLLKILREEGFGMDVVTKGE 71

Query: 63  VMLG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           ++          T  +N       +++  L     I+     +  +   +      +  +
Sbjct: 72  LLAAKLAGVPSHTVVWNGNGKSRDQMEHFLREDVRIVNVDSFEEMEIWRELNPEGVEYFI 131

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFHNNCENKSFLCFS 176
           R+NP V               + G   +D           N+ GL  H   +      F 
Sbjct: 132 RVNPEVDAKTHPHISTGLKKHKFGIPLEDLDSFMERFRSMNIRGLHVHIGSQITRVEPFV 191

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-KYSVQIYLEPGE 235
                + +    +    E I++GGG         +     R K   + K   ++ +E G 
Sbjct: 192 EAFSKVVRASERYG--FEEINIGGGWGINYSGEELDLSSYREKVVPDLKRFKRVIVEIGR 249

Query: 236 AIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLL--YQESATIYPNTGPYTAMV 292
            IV  +  L   V+ +        V+VD  +   +   L   Y     +        A V
Sbjct: 250 YIVAPSGYLLLRVVLVKRRHNKAFVVVDGGMNVLIRPALYSAYHRIFVLGKQGKEMRADV 309

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI- 351
            G  C +GD+         V+ GD I+ E+   Y     N +N    P   +   +G I 
Sbjct: 310 VGPLCESGDVIAYDRELPEVEPGDIIAVENAGAYGYTMSNNYNSTTRPAEVLVRENGRIS 369

Query: 352 KAIREFSYNDYYN 364
              R  +  D + 
Sbjct: 370 LIRRRETEMDIFK 382


>gi|167625818|ref|YP_001676112.1| diaminopimelate decarboxylase [Shewanella halifaxensis HAW-EB4]
 gi|167355840|gb|ABZ78453.1| diaminopimelate decarboxylase [Shewanella halifaxensis HAW-EB4]
          Length = 414

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 65/382 (17%), Positives = 115/382 (30%), Gaps = 23/382 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  +   + + L +   G    S  E
Sbjct: 26  GTPLYIYSRATLERHWHAFDNAVSDHPHLICYAVKANSNIAVLNVLARLGSGFDIVSGGE 85

Query: 63  V-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--K 117
           +  +           ++   K  E   +  N         + ++L +    A +L K   
Sbjct: 86  LSRVIEAGGDPAKVVFSGVGKTVEEMEMALNLGIYCFNVESAAELEQLNLVALRLGKVAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNC--- 167
           + LR+NP V              ++ G   +          E     V G+  H      
Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIAMEGAEAIFTRANELPGLEVKGVDCHIGSQLT 205

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
           E K FL     +  +         +I+   +GGG+  T  +        +   L E  + 
Sbjct: 206 EIKPFLDAMDRMLALIDRLAEQGIEIKHFDVGGGLGVTYDEEVPPQPDVYAAALLERLDG 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQE---SAT 280
             +++  EPG AI  N     T VL + EN       VD ++   +   L          
Sbjct: 266 RDLKLIFEPGRAIAANAGIFVTQVLYLKENSDKRFALVDGAMNDLIRPSLYSAWQKIIPV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
           I       T  V G  C  GD  G+      +  GD ++      Y     + +N     
Sbjct: 326 IERAGEMQTYDVVGPVCETGDFLGKDRELNIL-AGDYLAIRSSGAYGFTMSSNYNSRPRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDY 362
              + + D              
Sbjct: 385 AELMVDGDKAYVIREREKLAQL 406


>gi|163734181|ref|ZP_02141622.1| diaminopimelate decarboxylase [Roseobacter litoralis Och 149]
 gi|161392717|gb|EDQ17045.1| diaminopimelate decarboxylase [Roseobacter litoralis Och 149]
          Length = 421

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 58/390 (14%), Positives = 117/390 (30%), Gaps = 26/390 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+YL     LL +              +  A+K  +   +  TL Q   G    S  
Sbjct: 25  VGTPFYLYSTATLLRHFRLFDEALDGMDHLVCYAMKAASNQAILKTLAQAGAGMDVVSGG 84

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKD--KAQKLHK 116
           E +        G+   ++   K       A+          +  ++        A  +  
Sbjct: 85  EYLRAKAAGVPGDKIVFSGVGKTAAEIRLALEGGIRQFNVESEPEMEVLNATALAMGVTA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCEN 169
            I +R+NP V           +  ++ G                +   V G+  H   + 
Sbjct: 145 PITIRVNPDVDAKTHAKIATGKSENKFGIPISRAHEVYALAASLKGLEVIGIDVHIGSQL 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221
                F A    + +   +       I  + LGGG+                +   +K  
Sbjct: 205 TDLAPFEAAYDKVAELTGQLRAQGHNIRRLDLGGGLGIPYTRDNQAPPLPSDYGAMIKRK 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                 +I +EPG  IV N   + + V+ +     ++ +I+D ++   +   +       
Sbjct: 265 LGHLGCEIEIEPGRLIVGNAGIMVSEVIYVKSGEDRDFLIIDGAMNDLIRPAMYEAYHDI 324

Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           I               + G  C +GD F       PV  G+ ++F     Y     + +N
Sbjct: 325 IPVVEPDPGIEQVKFDIVGPVCESGDTFARARVMPPVAAGELVAFRSAGAYGAVMSSEYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              +    + + D         ++++    
Sbjct: 385 SRPLIPEVLVHEDQFAVIRPRPTFDEMIKR 414


>gi|332716389|ref|YP_004443855.1| Diaminopimelate decarboxylase [Agrobacterium sp. H13-3]
 gi|325063074|gb|ADY66764.1| Diaminopimelate decarboxylase [Agrobacterium sp. H13-3]
          Length = 422

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 60/389 (15%), Positives = 114/389 (29%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+     L  +         +    +  A+K  +   +  TL +   G    S  
Sbjct: 25  VGTPFYVYSTATLERHYKVFSGAFADVDAMVCYAMKANSNQAVLRTLAKLGAGIDVVSGG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E+              ++   K       A+ +        +  +L     +A K     
Sbjct: 85  ELRRALGAGVPANRIMFSGVGKTVAEMDYALEAGIYCFNIESEPELEVLNLRAVKAGKRA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
            +  RINP V           +  ++ G   +                V G+  H   + 
Sbjct: 145 HVSFRINPDVDARTHAKISTGKKENKFGISYERARAVYAHAATLPGIEVTGIDMHIGSQI 204

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221
                F    + +    +        I  + +GGG+    ++          +   +K  
Sbjct: 205 TELQPFEDAFRLLRELVESLRADGHTISHVDIGGGLGIPYREDNNPPPLPDAYAHIVKNE 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278
            +  + +I  EPG  IV N   L T V+ + +   KN VIVD ++   +   L       
Sbjct: 265 LKSLNCKIITEPGRLIVGNAGILVTEVIYVKDGGEKNFVIVDGAMNDLIRPTLYEAYHGI 324

Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                   +     A + G  C  GD           + GD I+      Y   +   +N
Sbjct: 325 RPVVQPAVDAPRIKADIVGPVCETGDYLALDREMAAPQPGDLIAVSSAGAYGAVQAGTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    +   D         +Y +   
Sbjct: 385 SRLLVPEVLVKGDKFHVIRPRGTYEELIA 413


>gi|77920014|ref|YP_357829.1| diaminopimelate decarboxylase [Pelobacter carbinolicus DSM 2380]
 gi|77546097|gb|ABA89659.1| diaminopimelate decarboxylase [Pelobacter carbinolicus DSM 2380]
          Length = 417

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 68/385 (17%), Positives = 128/385 (33%), Gaps = 22/385 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+     L  +L+       +    +  ++K  +   +  T   +  G    S  
Sbjct: 25  VGTPFYVYSHATLSRHLEAFSSAFADVPHLICYSIKANSNLAVLKTFVSHNAGFDIVSGG 84

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118
           E+    +         Y+   K     A             +  +L+     A +L KK 
Sbjct: 85  ELFRAQQVGCDPAKIVYSGVGKTEAEIADALQAGILMFNVESRQELDTINAVAGRLGKKA 144

Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCEN 169
           G+  R+NP V              ++ G      ++            V G+  H   + 
Sbjct: 145 GIAIRVNPDVDPQTHPYISTGMKKAKFGINISQALDDYRLAASLPNLEVIGVDCHIGSQL 204

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSE 223
                F   +  I    +   +    I+++ LGGG+  T ++       D+ + + E ++
Sbjct: 205 TKLSPFVDAIAKIRELVQTLQNEGFGIKYLDLGGGLGITYEEEEPPSPADYAEVIIEGTK 264

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES---A 279
              V +  EPG  +V N   L + VL + E   KN VIVD+++       L        A
Sbjct: 265 GLGVTLVFEPGRVMVGNAGMLVSKVLYVKEGEAKNFVIVDAAMNDLTRPALYGSYQGIQA 324

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                +    A V G  C +GD   +         GD ++      Y     + +N    
Sbjct: 325 VDRSTSDTIVADVVGPICESGDFLAQDREITAFSQGDLLAVASAGAYGFTMSSNYNSRRR 384

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
               +   D  +   +  +Y+D   
Sbjct: 385 VPEIMVKGDQVMVIRKRETYDDLIK 409


>gi|88797197|ref|ZP_01112787.1| LysA [Reinekea sp. MED297]
 gi|88780066|gb|EAR11251.1| LysA [Reinekea sp. MED297]
          Length = 416

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 68/384 (17%), Positives = 129/384 (33%), Gaps = 25/384 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +Q + +  D       +    +  A+K  +  G+   L +   G    S+ E
Sbjct: 26  GTPLYIYSRQAIEHQFDAYQQGLGDHPGLICYAVKANSNLGVLSLLAKRGAGFDIVSIGE 85

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +          E   ++           A+          + ++L +    A  +     
Sbjct: 86  LERVLAAGGAPEKIVFSGVAKKASEMRRALEVGIHCFNVESQAELERLNSVAGDMGIQAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNC--- 167
           I LR+NP V              ++ G   +          E +   V G+  H      
Sbjct: 146 ISLRVNPDVDAKTHPYISTGLKQNKFGVDHRLARAFYQRANELQHIRVIGMDCHIGSQLL 205

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV----KDFCQRLKEFSE 223
           E K F      L  +  E       +E I +GGGI     D  +    +++ ++L    +
Sbjct: 206 EAKPFEDAVDRLLTLLDELKQDGIALEHIDMGGGIGVKYTDQDIEPDVRNYIRKLVGHLK 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIY 282
             ++ + LEPG +IV N   L T V  + +N ++   IVD+ +   +   L       + 
Sbjct: 266 DRNLALILEPGRSIVANAGILVTEVEYLKDNGEHHFGIVDAGMNDLIRPALYQAWMDIVP 325

Query: 283 PNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            N        +  + G  C  GD  G+      +  GD ++ +    Y+    + +N   
Sbjct: 326 VNRNADGHSASWDIVGPICETGDFLGKARDLS-LTPGDLLAVKSAGAYSFVMASNYNTRE 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362
            P   +   D      +  +  D 
Sbjct: 385 RPAEVLVQGDAHTVVRQRETLTDL 408


>gi|222823390|ref|YP_002574964.1| carboxynorspermidine decarboxylase [Campylobacter lari RM2100]
 gi|222538612|gb|ACM63713.1| carboxynorspermidine decarboxylase [Campylobacter lari RM2100]
          Length = 387

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 131/377 (34%), Positives = 206/377 (54%), Gaps = 18/377 (4%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP Y++++ KL  N +    + + +  K+LLALK FA  G  D + +Y+ G T S L+E 
Sbjct: 13  TPAYVVEENKLRKNCELLAKVSEQSEAKILLALKGFAFSGAMDIVGEYLSGCTCSGLWEA 72

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
               E    E H ++ A+K+ EID ++   + ++FN+ +Q    K K +   K IGLR+N
Sbjct: 73  KYAKEYMDKEIHTFSPAFKEDEIDEIIKLSNHLVFNSFNQFK--KYKEKAKIKSIGLRVN 130

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
           P  S +   + +P   FSRLG +  D    +I +VNGL FH  CE +S      +L   E
Sbjct: 131 PEFSVAPKEIYNPCGRFSRLGIRAVDFENEDISDVNGLHFHALCE-ESAHSLELVLNAFE 189

Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243
            +F  FI  ++W++ GGG H T + Y  +      K+F++KY VQ+YLEPGEA+     T
Sbjct: 190 AKFAKFIKNMKWVNFGGGHHITKEGYDTQKLIDLCKKFADKYGVQVYLEPGEAVGWQCGT 249

Query: 244 LNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP---------------NTGPY 288
           L  +V+DI EN K + I+D+S EAH+PD ++   ++ +                     +
Sbjct: 250 LVASVVDIIENEKKIAILDTSSEAHMPDTIIMPYTSEVLNARILASRDGQNYSELKENEF 309

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348
             ++ G +CLAGDI GE+ F + +KIG +I F D A Y+I +   FNG+ +P +   + +
Sbjct: 310 AYLLGGNTCLAGDIMGEYAFNQELKIGQKIVFLDQAHYSIVKNTTFNGVKLPNLMFLDKN 369

Query: 349 GTIKAIREFSYNDYYNN 365
           G +  +REFSY +Y   
Sbjct: 370 GNLSMVREFSYENYSKR 386


>gi|16079395|ref|NP_390219.1| diaminopimelate decarboxylase [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221310255|ref|ZP_03592102.1| diaminopimelate decarboxylase [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221314579|ref|ZP_03596384.1| diaminopimelate decarboxylase [Bacillus subtilis subsp. subtilis
           str. NCIB 3610]
 gi|221319501|ref|ZP_03600795.1| diaminopimelate decarboxylase [Bacillus subtilis subsp. subtilis
           str. JH642]
 gi|221323777|ref|ZP_03605071.1| diaminopimelate decarboxylase [Bacillus subtilis subsp. subtilis
           str. SMY]
 gi|321311813|ref|YP_004204100.1| diaminopimelate decarboxylase [Bacillus subtilis BSn5]
 gi|226694207|sp|P23630|DCDA_BACSU RecName: Full=Diaminopimelate decarboxylase; Short=DAP
           decarboxylase
 gi|410117|gb|AAA67473.1| diaminopimelate decarboxylase [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|2634773|emb|CAB14270.1| diaminopimelate decarboxylase [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|320018087|gb|ADV93073.1| diaminopimelate decarboxylase [Bacillus subtilis BSn5]
          Length = 439

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 66/399 (16%), Positives = 129/399 (32%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   +     +      +AG   ++  A K F++  M     +        S 
Sbjct: 30  GTPLYVYDVALIRERAKSFKQAFISAGLKAQVAYASKAFSSVAMIQLAEEEGLSLDVVSG 89

Query: 61  YEVMLG-HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115
            E+       F  E   ++     ++    A+      I+ +   ++   +D  ++    
Sbjct: 90  GELYTAVAAGFPAERIHFHGNNKSREELRMALEHRIGCIVVDNFYEIALLEDLCKETGHS 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
             + LRI P V           +  S+ G            +  ++SE   + G+  H  
Sbjct: 150 IDVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQTERAIEQVLQSEHIQLLGVHCHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQI----EWISLGGGIHFTDKDYPVKDFC------- 215
            +      F    + I K+   +        + ++LGGG      +              
Sbjct: 210 SQIFDTAGFVLAAEKIFKKLDEWRDSYSFVSKVLNLGGGFGIRYTEDDEPLHATEYVEKI 269

Query: 216 -QRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            + +KE + +Y   I   ++EPG ++V +  T   TV    E       V     +  ++
Sbjct: 270 IEAVKENASRYGFDIPEIWIEPGRSLVGDAGTTLYTVGSQKEVPGVRQYVAVDGGMNDNI 329

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +     A         T  + G+ C +GD+         VK GD ++      
Sbjct: 330 RPALYQAKYEAAAANRIGEAHDKTVSIAGKCCESGDMLIWDIDLPEVKEGDLLAVFCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  N +N I  P +           ++  +Y D   
Sbjct: 390 YGYSMANNYNRIPRPAVVFVENGEAHLVVKRETYEDIVK 428


>gi|114049121|ref|YP_739671.1| diaminopimelate decarboxylase [Shewanella sp. MR-7]
 gi|113890563|gb|ABI44614.1| diaminopimelate decarboxylase [Shewanella sp. MR-7]
          Length = 414

 Score =  236 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 58/382 (15%), Positives = 106/382 (27%), Gaps = 23/382 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  +   + + L +   G    S  E
Sbjct: 26  GTPLYIYSRATLERHWHAFNNAVADHPHLVCYAVKANSNLAVLNVLARLGSGFDIVSGGE 85

Query: 63  -VMLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
              +           ++   K       A+          + ++L +    A +L K   
Sbjct: 86  LARVIEAGGDPAKVVFSGVGKTVAEMEQALNLGIYCFNVESSAELEQLNQVAGRLGKVAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    +               V G+  H   +  
Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIAMDEAEVVFARAHALPHLQVKGVDCHIGSQLT 205

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
               F   +  +             IE   +GGG+  T  D        +   L      
Sbjct: 206 EIQPFLDAMDRMLALIDRLAEQGIVIEHFDVGGGLGVTYDDETPPHPDVYAAALLARLGD 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQE---SAT 280
             +++  EPG AI  N     T VL +   + K   IVD ++   +   L          
Sbjct: 266 RKLKLIFEPGRAIAANAGIFVTQVLYLKENSDKRFAIVDGAMNDLIRPALYSAWQNIIPV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              +       + G  C  GD  G+      +  GD +       Y     + +N     
Sbjct: 326 NPRDEQAQVFDIVGPVCETGDFLGKDRALA-IAAGDLLVVRSSGAYGFAMASNYNTRPRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDY 362
              + + D              
Sbjct: 385 AEVMVDGDKAYLVREREKLAQL 406


>gi|163851214|ref|YP_001639257.1| diaminopimelate decarboxylase [Methylobacterium extorquens PA1]
 gi|163662819|gb|ABY30186.1| diaminopimelate decarboxylase [Methylobacterium extorquens PA1]
          Length = 422

 Score =  236 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 60/389 (15%), Positives = 112/389 (28%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +              +  A+K  +   +  TL     G    S  
Sbjct: 25  VGTPFYCYSTATLERHYRVFAEAFAGDDALVCFAMKANSNQAVLATLAHQGAGMDIVSEG 84

Query: 62  EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116
           E+         GE   ++     ++    A+ +N       +  +L    + A  +    
Sbjct: 85  ELRRALAAGVPGERIVFSGVGKTREEMAAALDANILCFNVESEPELAALSEVAVARGRKA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
            + +R+NP V           +  ++ G                    + G+  H   + 
Sbjct: 145 PVSIRVNPDVDALTHAKISTGKSDNKFGIPISRARAVYAGAARLPGLEIVGVDAHIGSQI 204

Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221
                F    + + +          ++  +  GGG+                    L+  
Sbjct: 205 TDLTPFDNAARLLCELARDLLADGHRLHHVDFGGGLGIPYRDDNAPPPDPTALAAILRPH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESAT 280
            +   ++   E G  I  N   L T V+ +   + K  VIVD ++   +   L     A 
Sbjct: 265 FKPLGLRPVFEIGRMIAGNAGILVTRVIYVKPTDEKTFVIVDGAMNDLIRPTLYEAFHAL 324

Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                        TA V G  C +GD          V  GD I+      Y   +   +N
Sbjct: 325 RPVREPAPDTPRLTADVVGPVCESGDYLALGREMPMVAPGDLIAVMSAGAYGAVQACTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    +   D +       SY+D   
Sbjct: 385 SRRLVPEVLVTGDRSAVVRPRPSYDDLIR 413


>gi|254282311|ref|ZP_04957279.1| diaminopimelate decarboxylase [gamma proteobacterium NOR51-B]
 gi|219678514|gb|EED34863.1| diaminopimelate decarboxylase [gamma proteobacterium NOR51-B]
          Length = 417

 Score =  236 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 52/381 (13%), Positives = 108/381 (28%), Gaps = 23/381 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+  +  +            N    +  A+K  +   + + L +   G    S  
Sbjct: 24  VGTPVYVYSRADIEAAFGEYQSALANRPHLICYAVKANSNLAVLNLLARLGAGFDIVSEG 83

Query: 62  E-VMLGHEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116
           E   +           ++   K CE    A+ +        + ++LN   + A       
Sbjct: 84  ELARVIAAGGDPSKVVFSGVGKSCEGIRQALDAGIRCFNVESEAELNVLNEIAAECGKVA 143

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCE- 168
            + LR+NP V  +           ++ G          +           G+  H   + 
Sbjct: 144 PVSLRVNPDVDANTHPYISTGLKENKFGVDIERAKDLYEQAAAMSFIEPVGVDCHIGSQL 203

Query: 169 --NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK---EFSE 223
                F+     L  +          ++ + LGGG+     +         +    +   
Sbjct: 204 LSITPFIDAVDRLLALVDALESSGITLKHLDLGGGLGVQYGEEQAPAISAYIAALTDRLG 263

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQES---A 279
               ++  EPG ++V     L T V  +          VD+++   +   L         
Sbjct: 264 DREFELIFEPGRSVVAMAGALVTRVNYLKPTEHRNFALVDAAMNDLIRPALYDAWMDILP 323

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
               +   +   V G  C  GD  G+      ++  D +       Y     + +N    
Sbjct: 324 ATQRHDTAHRWDVVGPVCETGDFLGKDRELA-LQPDDLLVVTGAGAYGFVMASNYNTRPR 382

Query: 340 PTIAVKNVDGTIKAIREFSYN 360
           P   V +        +  +  
Sbjct: 383 PAEVVVDKGTLHVVRQREALE 403


>gi|298369659|ref|ZP_06980976.1| diaminopimelate decarboxylase [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298282216|gb|EFI23704.1| diaminopimelate decarboxylase [Neisseria sp. oral taxon 014 str.
           F0314]
          Length = 406

 Score =  236 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 64/379 (16%), Positives = 128/379 (33%), Gaps = 23/379 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L    +            +  A+K      +         G    S  E
Sbjct: 18  GTPLYVYSQSALTEAFENYQTAFAALSPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77

Query: 63  VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G   +T    V   + EI+ A+ +        ++ ++++ +  A++L     
Sbjct: 78  LARVLAAGGDAAKTIFSGVGKSEAEIEFALHAGVKCFNMESIPEIDRIQKVAERLGKTAY 137

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D +E+           + G+  H   +  
Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAARQSHLKIIGIDCHIGSQLT 197

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                    + I             +E + LGGG+    +D     +  + Q +++    
Sbjct: 198 DLSPLIEACERILILVDRLADEGIVLEHLDLGGGVGIVYQDETVPDLGAYAQAVQKLIGT 257

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++ LEPG ++V N  +L T V  +     KN V+VD+++   +   L          
Sbjct: 258 RRLKLILEPGRSLVGNAGSLLTRVEFVKHGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317

Query: 284 NTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                 P TA + G  C  GD   +       + GD +       Y  +  + +N  N  
Sbjct: 318 EPKNIPPLTADIVGPICETGDFLAKGRTLA-CEAGDLLVVRSAGAYGASMASNYNTRNRA 376

Query: 341 TIAVKNVDGTIKAIREFSY 359
              + N + +    R  ++
Sbjct: 377 AEVLVNGNESKLIRRRETW 395


>gi|295399037|ref|ZP_06809019.1| diaminopimelate decarboxylase [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|294978503|gb|EFG54099.1| diaminopimelate decarboxylase [Geobacillus thermoglucosidasius
           C56-YS93]
          Length = 438

 Score =  236 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 61/399 (15%), Positives = 126/399 (31%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   +           +   VK  +  A K F++  M     +        S 
Sbjct: 30  GTPLYIYDVALIRARARAFKEAFQKHRVKSQVAYASKAFSSIAMVQLAEEEGLSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F  E   ++     ++  I A+ S    ++ +   +L   +  +      
Sbjct: 90  GELYTALQAGFPPERIHFHGNNKSREELIMALESGIGCVVVDNFYELELLEQLSKRHGKT 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G         E  +  + S   +V G+  H  
Sbjct: 150 TAILIRVTPGVEAHTHDYILTGQEDSKFGFDLNNGQADEALRKALSSPSFSVLGIHCHIG 209

Query: 167 CEN----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF-------- 214
            +        L    + + I      +      ++LGGG                     
Sbjct: 210 SQIFETTGFVLAAQKIFQKIANWKEMYGFVPAVVNLGGGFGIRYTSEDDPIPVSEYVDKI 269

Query: 215 CQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDIS--ENIKNLVIVDSSVEAHV 269
            + +K+   + ++ +   ++EPG +IV +  T   ++       N++  V VD  +  ++
Sbjct: 270 IEEVKKQVNEQNIPMPEIWIEPGRSIVGDAGTTIYSIGSQKEVPNVRRYVAVDGGMSDNI 329

Query: 270 PDYLLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   +  N           + G+ C +GD+            GD ++      
Sbjct: 330 RPALYEAKYEAVLANRVLDEKNEIVSIAGKCCESGDMLIWDLPLPKANPGDYLAVFCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  N +N I  P +           ++  +Y D   
Sbjct: 390 YGYSMANNYNRIPRPAVVFVENGEAQLVVKRETYEDLVR 428


>gi|291484767|dbj|BAI85842.1| diaminopimelate decarboxylase [Bacillus subtilis subsp. natto
           BEST195]
          Length = 441

 Score =  236 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 66/399 (16%), Positives = 128/399 (32%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   +     +       AG   ++  A K F++  M     +        S 
Sbjct: 32  GTPLYVYDVALIRERAKSFKQAFIFAGLKAQVAYASKAFSSVAMIQLAEEEGLSLDVVSG 91

Query: 61  YEVMLG-HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115
            E+       F  E   ++     ++    A+      I+ +   ++   +D  ++    
Sbjct: 92  GELYTAVAAGFPAERIHFHGNNKSREELRMALEHRIGCIVVDNFYEIALLEDLCKETGHS 151

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
             + LRI P V           +  S+ G            +  ++SE   + G+  H  
Sbjct: 152 IDVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQTERAIEQVLQSEHIQLLGVHCHIG 211

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQI----EWISLGGGIHFTDKDYPVKDFC------- 215
            +      F    + I K+   +        + ++LGGG      +              
Sbjct: 212 SQIFDTAGFVLAAEKIFKKLDEWRDSYSFVSKVLNLGGGFGIRYTEDDEPLHATEYVEKI 271

Query: 216 -QRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            + +KE + +Y   I   ++EPG ++V +  T   TV    E       V     +  ++
Sbjct: 272 IEAVKENASRYGFDIPEIWIEPGRSLVGDAGTTLYTVGSQKEVPGVRQYVAVDGGMNDNI 331

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +     A         T  + G+ C +GD+         VK GD ++      
Sbjct: 332 RPALYQAKYEAAAANRIGEAHDKTVSIAGKCCESGDMLIWDIDLPEVKEGDLLAVFCTGA 391

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  N +N I  P +           ++  +Y D   
Sbjct: 392 YGYSMANNYNRIPRPAVVFVENGEAHLVVKRETYEDIVK 430


>gi|282163529|ref|YP_003355914.1| diaminopimelate decarboxylase [Methanocella paludicola SANAE]
 gi|282155843|dbj|BAI60931.1| diaminopimelate decarboxylase [Methanocella paludicola SANAE]
          Length = 426

 Score =  236 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 65/390 (16%), Positives = 126/390 (32%), Gaps = 29/390 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ ++ +L +N        K  GV L  A K   +  +   L Q   G  + S  E
Sbjct: 31  GTPLYVTNEDRLRDNYRRFAKAFK--GVPLFFAAKSNNSLVVQRILAQEGAGADAFSDGE 88

Query: 63  VMLGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKI 118
           + L        +   +      D E+   +     +  ++  +L      A        +
Sbjct: 89  IYLARLAGIPAQKILFTGNSKTDAELAYAVEAGVMVSIDSHDELISLSHIAKAHGKTMNV 148

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKS 171
             R+NP +S             S+ G   ++ +++  +       N  G+  H   +   
Sbjct: 149 AFRVNPEISGDTHPKLATGLKISKFGIPRQEIVDTYKEASKLPGINPVGIHCHIGSQILE 208

Query: 172 FLCFSAMLKNIEKEFGHF--ITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEFSEK 224
              +   +  +            +E++ +GGG     +       P       L  + ++
Sbjct: 209 VSPYVETVNRMMDLVAQISKFVDLEFVDIGGGFGIPYQKDVKAPTPQDYAKAILPLYRKR 268

Query: 225 YS-----VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA 279
                   ++++EPG  IV +TT L T V  + +     + VD+     +   +      
Sbjct: 269 CKEIGISPELHIEPGRYIVADTTVLLTHVNTVKKAYSTFIGVDAGFNTLIRPAMYDSYHE 328

Query: 280 TIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
            +  N        T  V G  C +GDI         VK  D I+  D   Y     + + 
Sbjct: 329 VVVANKADKKSASTYTVAGPICESGDILARDRKLPQVKKDDIIALLDAGAYGFCMSSQYL 388

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
                   + +        +  +Y+D   N
Sbjct: 389 ARPRSAEVLIHDGQAELIRKRETYDDLIQN 418


>gi|113968735|ref|YP_732528.1| diaminopimelate decarboxylase [Shewanella sp. MR-4]
 gi|113883419|gb|ABI37471.1| diaminopimelate decarboxylase [Shewanella sp. MR-4]
          Length = 414

 Score =  236 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 58/382 (15%), Positives = 106/382 (27%), Gaps = 23/382 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  +   + + L +   G    S  E
Sbjct: 26  GTPLYIYSRATLERHWHAFNNAVADHPHLVCYAVKANSNLAVLNVLARLGSGFDIVSGGE 85

Query: 63  -VMLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
              +           ++   K       A+          + ++L +    A +L K   
Sbjct: 86  LARVIEAGGDPAKVVFSGVGKTVAEMEQALNLGIYCFNVESSAELEQLNQVAGRLGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    +               V G+  H   +  
Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIAMDEAEVVFARAHALPHLQVKGVDCHIGSQLT 205

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
               F   +  +             IE   +GGG+  T  D        +   L      
Sbjct: 206 EIQPFLDAMDRMLALIDRLAEQGIVIEHFDVGGGLGVTYDDETPPHPDVYAAALLARLGD 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQE---SAT 280
             +++  EPG AI  N     T VL +   + K   IVD ++   +   L          
Sbjct: 266 RKLKLIFEPGRAIAANAGIFVTQVLYLKENSDKRFAIVDGAMNDLIRPALYSAWQNIIPV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              +       + G  C  GD  G+      +  GD +       Y     + +N     
Sbjct: 326 NPRDEQAQVFDIVGPVCETGDFLGKDRALA-IAAGDLLVVRSSGAYGFAMASNYNTRPRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDY 362
              + + D              
Sbjct: 385 AEVMVDGDKAYLVREREKLAQL 406


>gi|229496138|ref|ZP_04389858.1| carboxynorspermidine decarboxylase [Porphyromonas endodontalis ATCC
           35406]
 gi|229316716|gb|EEN82629.1| carboxynorspermidine decarboxylase [Porphyromonas endodontalis ATCC
           35406]
          Length = 371

 Score =  236 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 117/369 (31%), Positives = 181/369 (49%), Gaps = 10/369 (2%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y++++  L  NL     +   A V++++A K FA W +F    +Y  G+T+SS +E  
Sbjct: 5   PRYVVEEPLLRRNLSLIRKVADEAKVEIIVAFKAFALWKLFPIFREYGFGSTASSPWEAR 64

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
           LG+E    + HA++ AY+  +       C  I FN++SQ   F           GLRINP
Sbjct: 65  LGYEGLERKAHAFSPAYRAQDWAEWTRCCSHITFNSLSQYRAFCT--PSSEVSYGLRINP 122

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S  +  L +P  P SR G   ++      + + GL  H  CE  SF     +L  IE+
Sbjct: 123 GYSPVETDLYNPALPGSRFGLSPEELGLHLPEGIEGLHVHVLCEGNSFQ-LEKLLSIIEQ 181

Query: 185 EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNTTT 243
            F   +++  W++LGGG   T K+Y V      LK F +++   Q+ +EPG A    T  
Sbjct: 182 RFASPLSEACWLNLGGGHLMTHKEYNVPHLIAVLKAFRQRHPHLQLIMEPGSAFAWQTGF 241

Query: 244 LNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATIY-----PNTGPYTAMVCGRSC 297
           L + VLDI   +     I+D S   H+PD L       I      P  G  T  + G SC
Sbjct: 242 LESHVLDIVEHDGIKTAILDVSFTCHMPDCLEMPYKPVIRGAHHDPVEGLPTYRLGGNSC 301

Query: 298 LAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF 357
           L+GD  G++ F+KP+++GD + FED+  Y   + + FNG+  P + ++  +G    +R F
Sbjct: 302 LSGDFLGDWSFDKPLEVGDTLIFEDMIHYTTVKTHMFNGVAHPDLVLQKSNGEEVLLRRF 361

Query: 358 SYNDYYNNL 366
            Y DY   +
Sbjct: 362 GYQDYKERM 370


>gi|149178525|ref|ZP_01857113.1| diaminopimelate decarboxylase [Planctomyces maris DSM 8797]
 gi|148842640|gb|EDL57015.1| diaminopimelate decarboxylase [Planctomyces maris DSM 8797]
          Length = 423

 Score =  236 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 57/394 (14%), Positives = 119/394 (30%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++  K   L  L             +  ++K      +  T+N         S  E
Sbjct: 26  GTPLWVYSKSDFLGRLKEIQDAFAEVDPVICYSVKANGNLSILKTMNDAGSSFDVVSGGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHKKIG 119
           +              +    K  E        D ++F+  + ++L+     A +L+    
Sbjct: 86  LFRVQQAGADTSRVVFAGVGKTDEEIRQALKADILMFDVESEAELDAIARIAGELNCVGR 145

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCENK 170
             LR+NP +           +  ++ G   +         ++ E   + G+  H      
Sbjct: 146 VALRLNPDIDAKTHHKTTTGKKGNKFGMDIERATELADKVLKDEHLELTGIHMHLGSPIL 205

Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
           S   ++  +K   +   +         W++LGGG   + K       + +   +    ++
Sbjct: 206 STDPYAKAVKKGAEVISQLREKGHNTNWLNLGGGFGISYKTDEGPSAQTYADVIVPTIKE 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQES----- 278
              ++ LEPG  I  N+  L + ++           I D  +   V   +          
Sbjct: 266 IGCRLALEPGRFIAGNSGVLISQIVFTKREGGKLFYIQDGGMTDLVRPAMYDSYHRVWPV 325

Query: 279 ----ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                  +   G       A V G  C + D F +  +  P++ GD +       Y    
Sbjct: 326 KPKVPMPFDCEGEIEGCEPADVVGPVCESCDYFAKDRYLPPMQRGDYLCMFSAGAYGSVM 385

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            + +N        + +        R  +Y +   
Sbjct: 386 SSNYNARPRSAEILVDGSENQVIRRRETYEELIA 419


>gi|226227158|ref|YP_002761264.1| diaminopimelate decarboxylase [Gemmatimonas aurantiaca T-27]
 gi|226090349|dbj|BAH38794.1| diaminopimelate decarboxylase [Gemmatimonas aurantiaca T-27]
          Length = 423

 Score =  236 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 60/386 (15%), Positives = 119/386 (30%), Gaps = 23/386 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+     +    +   +  +    ++  A+K  +   +   L +   G    S  
Sbjct: 27  VGTPAYVYCAGTIRARYERLAHAFEGVPHRIHFAMKANSNLAVLRLLQELGAGVDIVSGG 86

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKI 118
           E+    E  F G    ++   K  +      +     I   + ++L      A +     
Sbjct: 87  ELYRAREAGFTGRDVVFSGVGKTVQEIEQALDDRVLLINVESEAELVTIDAVAARKGVVA 146

Query: 119 GLRINPSVS---YSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCE 168
            + I  +      +            + G    D         E     + GL  H   +
Sbjct: 147 PIAIRVNPEVTVETPHAYIRTGEKGQKFGIPRDDITRLVSLIRELPHIALRGLGMHLGSQ 206

Query: 169 NKSFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEF 221
             +       L       +        + ++ +GGG+    +       V+D+ Q ++  
Sbjct: 207 IGNADPLRDALPRLLVAVEAARAEGHDVRYLDVGGGLSVPYEPDERDADVEDYAQIVRAA 266

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLL--YQES 278
           + +  + + LEPG  IV    TL T VL       K+ ++ D+ +   +   L   Y   
Sbjct: 267 ATETGLTLLLEPGRYIVAEAGTLLTQVLYRKHAAGKDFIVTDAGMSDLIRPALYQAYHAI 326

Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
             +   T   TA V G  C +GD F +      V  G+ ++      Y     + +N   
Sbjct: 327 EAVVDTTRTITADVVGPICESGDFFAKNRELPDVSAGELLAIRTTGAYGYTMTSNYNSRP 386

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364
                + +            Y D   
Sbjct: 387 RAVEVLADGSRFAIITERERYEDLVR 412


>gi|295690237|ref|YP_003593930.1| diaminopimelate decarboxylase [Caulobacter segnis ATCC 21756]
 gi|295432140|gb|ADG11312.1| diaminopimelate decarboxylase [Caulobacter segnis ATCC 21756]
          Length = 421

 Score =  236 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 63/390 (16%), Positives = 119/390 (30%), Gaps = 26/390 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSS 58
           + TP Y+  +  L  +          AGV    +  A+K  +   +   L     G  + 
Sbjct: 25  VGTPVYVYSRATLERHFTVFRDALALAGVVDPLIAYAVKANSNVAVLKVLGDLGAGADTV 84

Query: 59  SLYEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL- 114
           S  E+         GE   ++   K     A    +    I   +  +L+     A +L 
Sbjct: 85  SEGEIRRALAAGIPGERIVFSGVGKTRREIAFALTTGVAEINVESEPELDLIAQVAAELG 144

Query: 115 -HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNN 166
              K+  R+NP V+          +  ++ G    +                 G+  H  
Sbjct: 145 VKAKVAFRVNPDVAAGGHAKIATGKSENKFGVSFAEAARLYANASNNSSLEPVGVACHIG 204

Query: 167 CENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKD----FCQRLK 219
            +        A    +             +E + LGGG+     + P       F   + 
Sbjct: 205 SQITDLEPMRAAFTKMRGLVEQLLGEGLSVERLDLGGGLGVPYFNSPEPPSPAAFAAMVG 264

Query: 220 EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDYLLYQE 277
           E ++   V +  EPG  I  N   L + V+ + E  +      +D+++   +   +    
Sbjct: 265 EVTQGLPVTLAFEPGRVIAANAGVLVSEVVHVHERPEGRKFLVIDAAMNDLIRPAMYDAF 324

Query: 278 SA--TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                +    G     V G  C  GD F       P   GD ++F     Y     + +N
Sbjct: 325 HDIRPVIQRGGETVYDVVGPVCETGDTFTRDRALPPFTTGDLVAFMSAGAYGAAMASEYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              +    + + D      +  +Y +    
Sbjct: 385 TRPLVPEVLVDGDRYAVIRKRPTYEEILAR 414


>gi|291279674|ref|YP_003496509.1| carboxynorspermidine decarboxylase [Deferribacter desulfuricans
           SSM1]
 gi|290754376|dbj|BAI80753.1| carboxynorspermidine decarboxylase [Deferribacter desulfuricans
           SSM1]
          Length = 394

 Score =  236 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 137/370 (37%), Positives = 212/370 (57%), Gaps = 7/370 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y+I +  +  N      ++  AGVK+LLA K +     +  +++Y+ G  +S L+
Sbjct: 20  IDTPAYVISEDAIEYNCQILKRVQDEAGVKILLAQKAYTLPVTYPLISKYLYGVCASGLW 79

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LG++ F  E H Y  AY++ EID ++   D +IFN+++QL K+ +  +   K++GLR
Sbjct: 80  EAKLGYKHFKKEVHTYAPAYRNDEIDEIIEYSDMVIFNSINQLKKYGELVKNRGKQVGLR 139

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP  S  +  L +P  P SR G   +D    ++  V+G  FH  CE  S   F  +LK+
Sbjct: 140 VNPGHSEVEVDLYNPCIPGSRFGVNPEDIEGQDLSIVDGFHFHALCEQNS-DVFVRVLKS 198

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ--IYLEPGEAIVT 239
            EK FG +I +++W++ GGG H T  DY +K F   LK+FS++Y     +YLEPGEA+V 
Sbjct: 199 FEKRFGKYINELKWVNFGGGHHITRDDYDLKLFIDTLKDFSKRYGKNLDVYLEPGEAVVL 258

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGR 295
           +     T VLDI  N  ++ IVDSS E H PD L    +  I      +   +   + G 
Sbjct: 259 HAGVFITQVLDIINNGVDIAIVDSSAETHTPDVLAMPYTPKILGAGDWDEYEFKYRIGGC 318

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           SCLAGD FG + F+ P+K+GD++   D+A Y+  + N FNG+ +P+I V N+   IK ++
Sbjct: 319 SCLAGDFFGYYSFKNPLKVGDKLIMLDMALYSFVKNNTFNGVKLPSIVVINLKDGIKWVK 378

Query: 356 EFSYNDYYNN 365
            +SY+D+ N 
Sbjct: 379 NYSYSDFENK 388


>gi|312110358|ref|YP_003988674.1| diaminopimelate decarboxylase [Geobacillus sp. Y4.1MC1]
 gi|311215459|gb|ADP74063.1| diaminopimelate decarboxylase [Geobacillus sp. Y4.1MC1]
          Length = 438

 Score =  236 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 61/399 (15%), Positives = 126/399 (31%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   +           +   VK  +  A K F++  M     +        S 
Sbjct: 30  GTPLYIYDVALIRARARAFKEAFQKHRVKSQVAYASKAFSSIAMVQLAEEEGLSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F  E   ++     ++  I A+ S    ++ +   +L   +  +      
Sbjct: 90  GELYTALQAGFPPERIHFHGNNKSREELIMALESGIGCVVVDNFYELELLEQLSKRHGKT 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G         E  +  + S   +V G+  H  
Sbjct: 150 TAILIRVTPGVEAHTHDYILTGQEDSKFGFDLNNGQADEALRKALSSPSFSVLGIHCHIG 209

Query: 167 CEN----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF-------- 214
            +        L    + + I      +      ++LGGG                     
Sbjct: 210 SQIFETTGFVLAAQKIFQKIANWKAMYGFVPAVVNLGGGFGIRYTSEDDPIPVSEYVDKI 269

Query: 215 CQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDIS--ENIKNLVIVDSSVEAHV 269
            + +K+   + ++ +   ++EPG +IV +  T   ++       N++  V VD  +  ++
Sbjct: 270 IEEVKKQVNEQNIPMPEIWIEPGRSIVGDAGTTIYSIGSQKEVPNVRRYVAVDGGMSDNI 329

Query: 270 PDYLLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   +  N           + G+ C +GD+            GD ++      
Sbjct: 330 RPALYEAKYEAVLANRVLDEKNEIVSIAGKCCESGDMLIWDLPLPKANPGDYLAVFCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  N +N I  P +           ++  +Y D   
Sbjct: 390 YGYSMANNYNRIPRPAVVFVENGEAQLVVKRETYEDLVR 428


>gi|163741842|ref|ZP_02149232.1| diaminopimelate decarboxylase [Phaeobacter gallaeciensis 2.10]
 gi|161385015|gb|EDQ09394.1| diaminopimelate decarboxylase [Phaeobacter gallaeciensis 2.10]
          Length = 421

 Score =  236 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 59/390 (15%), Positives = 118/390 (30%), Gaps = 26/390 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+YL     LL +        K     +  A+K  +   +  TL Q   G    S  
Sbjct: 25  VGTPFYLYSTATLLRHFHLFNDALKGMDHLVCYAMKAASNQAILKTLAQAGAGMDVVSQG 84

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E +        G+   ++   K  +    A+          +  +++     A +L    
Sbjct: 85  EYLRAKAAGVPGDRIVFSGVGKTQDEIRTALSGGIRQFNVESEPEMDVINAVALELGVVA 144

Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            +  R+NP V           +  ++ G       E   +        V G+  H   + 
Sbjct: 145 PITVRVNPDVDAKTHAKIATGKSENKFGIPIARAREVYARAASLPGLKVIGIDVHIGSQL 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221
                F    + + +   +       I  + LGGG+                +   ++  
Sbjct: 205 TELAPFELAYQKVAELTEQLRADGHDIHRLDLGGGLGIPYTRSNDTPPLPVEYGAMVQRT 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESAT 280
                 +I +EPG  I  N   + + V+ +         I+D ++   +   +       
Sbjct: 265 LGHLGCEIEIEPGRLIAGNAGIMVSKVIYVKSGEDRDFLIIDGAMNDLIRPAMYEAYHDI 324

Query: 281 IYPNT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +               + G  C  GD F       P++ GD ++F     Y     + +N
Sbjct: 325 VPVIEPSAGVEQRAYDIVGPVCETGDTFARHRDMSPLEAGDLVAFRSAGAYGAVMASEYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              +    + N D      R   +++  N 
Sbjct: 385 SRPLIPEVLVNGDQFAVIRRRPDFDEMINR 414


>gi|291531604|emb|CBK97189.1| carboxynorspermidine decarboxylase [Eubacterium siraeum 70/3]
          Length = 392

 Score =  236 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 122/385 (31%), Positives = 194/385 (50%), Gaps = 23/385 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+ ++  L  N +    ++   G K+LLA K F+ +  +  ++ Y+ GTT+S LY
Sbjct: 11  VDTPCYVTEECYLRRNCEILKSVQDMTGCKILLAQKAFSMYSTYPLISGYLSGTTASGLY 70

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LG+E FG ETH ++ AY D EI+ +       +FN++ Q    +D  +  H  I + 
Sbjct: 71  EARLGYEYFGNETHVFSPAYTDKEINELAKYAGHFVFNSIRQFALHRDAVKDKHCLIRVN 130

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKSFLC 174
              S       + DP  P SRLG+      E   +        ++GL FH  CE  S   
Sbjct: 131 PRFSTQE-GHEIYDPCAPGSRLGQTLASFEEDIKRYGEEILDEIDGLHFHTLCEQNSDDL 189

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
                + +E +FG ++ ++  I+ GGG H T  DY +    + +  F  +Y +++YLEPG
Sbjct: 190 MRTAKE-VEVQFGKYLDKMSVINFGGGHHITRDDYDIDTLVEVINHFKNEYGLEVYLEPG 248

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIV----DSSVEAHVPDYLLYQESATIYPNTG---- 286
           EA+  N   L TTVLD+ +   N        D+S   H+PD L       I    G    
Sbjct: 249 EAVALNAGFLVTTVLDVIDGKINGEDDIAILDASAACHMPDVLEMPYRPVIIQPNGNIAG 308

Query: 287 -----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                  T  + G +CLAGD+ G++ F++P+K GDR+   D++ Y++ + N FNG+ +P+
Sbjct: 309 EKGERAVTVRLGGNTCLAGDVIGDYSFDEPLKPGDRLVLCDMSIYSMVKNNTFNGMALPS 368

Query: 342 IAVKNVDGTIKAIREFSYNDYYNNL 366
           I   N    ++ IREFSY+D+   L
Sbjct: 369 IY-YNTSLGMRKIREFSYDDFRCRL 392


>gi|56461656|ref|YP_156937.1| diaminopimelate decarboxylase [Idiomarina loihiensis L2TR]
 gi|56180666|gb|AAV83388.1| Diaminopimelate decarboxylase [Idiomarina loihiensis L2TR]
          Length = 420

 Score =  236 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 73/385 (18%), Positives = 125/385 (32%), Gaps = 26/385 (6%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           +P Y+  K ++L N             KL  A+K  +   +   L ++  G    S  E+
Sbjct: 28  SPLYVYSKGQILKNWREFQQYWPAP-HKLCYAVKANSNLAILQLLAEHGAGFDIVSGGEL 86

Query: 64  MLGHEKFG--GETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKI 118
                  G  G+     VA  KD  I A+ +        + ++L + +D A        +
Sbjct: 87  QRVLMAGGKAGDVVFSGVAKSKDEIIMALEAGIGCFNVESEAELERIQDIAAAMDKQAPV 146

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENKS 171
            LR+NP V              ++ G                   N+ G   H   +  +
Sbjct: 147 SLRVNPDVDAKTHPYIATGMKANKFGISMSLAKPVFLKAHSLPNINLIGADCHIGSQIMT 206

Query: 172 FLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKDFC----QRLKEFSEK 224
              F    + +     E      Q+  + LGGG     +     D      + +K     
Sbjct: 207 AEPFLDAAQRMFNLVSELEKDGVQLTHLDLGGGFGVAYQPEEPLDKSFYLKELVKLAENY 266

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATIYP 283
             + + LEPG AI  +   L TTV  I  +     + VD+ +   +   L       +  
Sbjct: 267 PQITLVLEPGRAITADAGVLLTTVEYIKPSEDKNFVLVDAGMNDLIRPSLYQAWHDILPA 326

Query: 284 NT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
           +     G     + G  C  GD FG       V+ GD ++ +    Y     + +N    
Sbjct: 327 HENKRGGDQLNDIVGPVCETGDFFGHARHL-NVQQGDVLAIKHAGAYGFTMASNYNSRGR 385

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
           P   + + D         S+ND   
Sbjct: 386 PPEVLVSGDNATLIRERESFNDLVR 410


>gi|87121333|ref|ZP_01077223.1| diaminopimelate decarboxylase [Marinomonas sp. MED121]
 gi|86163490|gb|EAQ64765.1| diaminopimelate decarboxylase [Marinomonas sp. MED121]
          Length = 418

 Score =  236 bits (602), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 58/383 (15%), Positives = 118/383 (30%), Gaps = 26/383 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  ++ L  +         +    +  A+K  +   + + L +   G    S+ E
Sbjct: 26  GTPCYVYSRETLERHYKAYADAFASHPSLICYAVKACSNIAILNVLAKMGAGFDIVSVGE 85

Query: 63  VMLG-HEKFGGETHAYNV-AYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++    +  E+  A+          +  +L +  + A+KL     
Sbjct: 86  LERVLRAGGDASKVMFSGLGKQAHEMERALEVGIHCFNIESEFELYRLNEVAEKLGKKAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D +            +V G+  H   +  
Sbjct: 146 VSLRVNPDVDAKTHPYISTGLKENKFGIDINDAVRIYTIAHELPYLDVMGVDCHIGSQLT 205

Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224
               F      + K          +I+ + LGGG+    +D       D+   +    E 
Sbjct: 206 ELTPFIDAFDRLLKLIDELALVGIEIKHVDLGGGLGVRYRDEVPPVPADYAALVLPKVEN 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIYP 283
            +  +  EPG +I  N   L T V  +  +      I+D ++   +   L       +  
Sbjct: 266 RAFSLAFEPGRSIAANAGILVTQVEFLKCSEHKNFAIIDGAMNDLIRPSLYSAWMDIVPV 325

Query: 284 NTG------PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                         + G  C  GD  G+      ++ GD ++      Y     + +N  
Sbjct: 326 KLKSQATGNKKLYDLVGPVCETGDFLGKDREL-DLEAGDLLAVRSAGAYGFTMSSNYNSR 384

Query: 338 NMPTIAVKNVDGTIKAIREFSYN 360
           N     + + D         +  
Sbjct: 385 NRAAEVMVDGDKVHLIRARETIE 407


>gi|119943834|ref|YP_941514.1| diaminopimelate decarboxylase [Psychromonas ingrahamii 37]
 gi|119862438|gb|ABM01915.1| diaminopimelate decarboxylase [Psychromonas ingrahamii 37]
          Length = 421

 Score =  236 bits (602), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 59/389 (15%), Positives = 125/389 (32%), Gaps = 28/389 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +  +              +  A+K  +   + + + +   G    S+ E
Sbjct: 27  GTPAYIYSRATIERHWQAFDSAAGKHPHLICYAVKANSNLAVLNLMARMGSGFDIVSVGE 86

Query: 63  VMLG-HEKFGGETHAYNV-AYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDKAQ--KLHKK 117
           +M         +   ++     + EI  A+ +N       ++S+L +    A+   +   
Sbjct: 87  LMRVIQAGGDPKKIVFSGVGKTEIEISAALQANIMCFNVESISELYRINSVAKALNVKAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNC--- 167
           I +RINP++              ++ G + +  ++            + G+  H      
Sbjct: 147 ISIRINPNIDAGTHPYISTGLKENKFGIEIEQALDVYKIASDLEFLEIKGVDCHIGSQLT 206

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
           E   F+     L  +          I  + LGGG+     D    +  + +     + + 
Sbjct: 207 EIAPFIEALDKLLILIDLLAEKGITISHLDLGGGLGVPYDDETPPEPAEYMTAIINRMAG 266

Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY- 282
           +   +  EPG AI+ N   L T V  +   + KN  IVD+++   +   L       I  
Sbjct: 267 RSLKLIFEPGRAIMANAGVLVTKVEFLKLNDYKNFAIVDAAMNDLIRPALYSAWQNIIPL 326

Query: 283 -------PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                   +    +  + G  C  GD  G+      +  GD +       Y     + +N
Sbjct: 327 NTDYQDGQDRPVRSYDIVGPICETGDFLGKERQLA-LAEGDYLVIRSTGAYGSTMSSNYN 385

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
                   + + +            D + 
Sbjct: 386 SRCRAAEILVDGEKAFIVREREELKDLWR 414


>gi|114319371|ref|YP_741054.1| diaminopimelate decarboxylase [Alkalilimnicola ehrlichii MLHE-1]
 gi|114225765|gb|ABI55564.1| diaminopimelate decarboxylase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 415

 Score =  236 bits (602), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 58/379 (15%), Positives = 121/379 (31%), Gaps = 24/379 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+  K  + +          +   ++  A+K  +   +   L +   G    S  
Sbjct: 25  VGTPTYVYSKAAIESAWRGFDQALGDHPHQVCYAVKANSNLAVLQLLARLGSGFDIVSGG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH--K 116
           E+              ++   K  D    A+          + ++L++    A +L    
Sbjct: 85  ELERVLAAGGDPRRVVFSGVGKTADEMRRALEVGIRCFNVESTAELSRLNRVAGELRLTA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCEN 169
            + LR+NP V              ++ G          +    +   +V G+ FH   + 
Sbjct: 145 PVSLRVNPDVDARTHPYISTGLRENKFGIDIREAEAIYRQAANAAHLSVEGVDFHIGSQL 204

Query: 170 KSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSE 223
                 +  L+ +             I  + +GGG+    +D       D+ + L +  +
Sbjct: 205 TDLSPIADALERVLALVDRLAAEGITIRHLDVGGGLGIRYRDETPPAAEDYARVLLDGLQ 264

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIY 282
              +++ +EPG A+V N   L T V  + + + +   +VD+++   +   L     A   
Sbjct: 265 GRDLELLMEPGRAVVGNAGVLITRVQYLKDGSEQRFAVVDAAMNDLLRPSLYDGWHAITP 324

Query: 283 PNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
                 T      + G  C  GD  G+      +  GD ++      Y     + +N   
Sbjct: 325 VRPRADTDTLPWDIVGPVCETGDFLGKQRELA-LAEGDLLAVHSAGAYGFVMASNYNTRP 383

Query: 339 MPTIAVKNVDGTIKAIREF 357
            P   +             
Sbjct: 384 RPAEVLVAGGCHHLVRERE 402


>gi|114706749|ref|ZP_01439649.1| diaminopimelate decarboxylase protein [Fulvimarina pelagi HTCC2506]
 gi|114537697|gb|EAU40821.1| diaminopimelate decarboxylase protein [Fulvimarina pelagi HTCC2506]
          Length = 422

 Score =  236 bits (602), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 68/387 (17%), Positives = 117/387 (30%), Gaps = 25/387 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP+Y      LL + D       +    +  A+K  +   +  TL     G    S  
Sbjct: 25  IGTPFYCYSTATLLRHYDVFSSAFADIDAMVCYAMKANSNQAVLKTLADRGAGADVVSGG 84

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKAQK--LHK 116
           E++         +   ++   K      +            + ++L     +A    L  
Sbjct: 85  ELLRALRVGIDPKKIMFSGVGKTIAEIDMAIASGIFCFNIESENELELISARAVDAGLTA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
            +  RINP V           R   + G           +        V G+  H   + 
Sbjct: 145 HVSFRINPDVDAKTHAKISTGRKSDKFGIAYDRAESIYARARELPGVEVTGIDMHIGSQI 204

Query: 170 ---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221
              K F      L  +         +I  I LGGG+    K+          + + +K  
Sbjct: 205 IDLKPFDEAFDRLATLVHRLRAAGHEISHIDLGGGLGVPYKNADATPPEPHAYAEIVKRH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280
                 +I  EPG  IV N   L   VL + ++  K  VIVD+++   +   L       
Sbjct: 265 VRDLGAKIVFEPGRMIVANAGILVARVLYVKKDEGKTFVIVDAAMNDLIRPTLYEAWHEI 324

Query: 281 ----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                  N    TA + G  C +GD  G+      V  GD +       Y   + + +N 
Sbjct: 325 QPVERAANRKTITADIVGPICESGDFLGKDREIVEVAEGDLVFLSSAGAYGAVQSSTYNS 384

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYY 363
             +    +             + ++  
Sbjct: 385 RPLIAETLVKGGEYAVIRERQTIDELI 411


>gi|262273212|ref|ZP_06051028.1| diaminopimelate decarboxylase [Grimontia hollisae CIP 101886]
 gi|262222790|gb|EEY74099.1| diaminopimelate decarboxylase [Grimontia hollisae CIP 101886]
          Length = 417

 Score =  236 bits (602), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 58/378 (15%), Positives = 118/378 (31%), Gaps = 24/378 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  +  G+ + L +   G    S  E
Sbjct: 27  GTPLYVYSRATLERHWHAFDKAVGDHPHLICYAVKANSNLGVLNVLARLGSGFDIVSQGE 86

Query: 63  V-MLGHEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +  +       +   ++   K       A+          + ++L++    A +L     
Sbjct: 87  LERVVAAGGDPKKVVFSGVGKTAPEMARALELGIKCFNVESEAELDRLNQIAGELGKKAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LRINP V              ++ G       E           +V+G+  H   +  
Sbjct: 147 VSLRINPDVDAKTHPYISTGLKENKFGIAFDRAREVYHYANSLPHLDVHGIDCHIGSQLT 206

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F         +  +       I  + +GGG+  T        P       L+  + 
Sbjct: 207 DLAPFIESTDRLLGLIDDLRQDGIHITHLDVGGGLGVTYNDEKPPEPSDYAKALLERLAN 266

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATI- 281
              +++  EPG AI  N   L T V  +  N +    I+D+++   +   L       + 
Sbjct: 267 HQEIELVFEPGRAIAANAGVLLTKVEFLKHNEEKNFAIIDAAMNDLLRPALYQAWQEIVP 326

Query: 282 --YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                    T  + G  C  GD  G+      ++ GD ++      Y     + +N    
Sbjct: 327 VKPRQGEAKTYDLVGPVCETGDYLGKDRSLV-LEAGDLLAVRSSGAYGFVMSSNYNTRCR 385

Query: 340 PTIAVKNVDGTIKAIREF 357
               + + + +    +  
Sbjct: 386 AAEVMVDGNQSHLVRQRE 403


>gi|325270905|ref|ZP_08137492.1| carboxynorspermidine decarboxylase [Prevotella multiformis DSM
           16608]
 gi|324986702|gb|EGC18698.1| carboxynorspermidine decarboxylase [Prevotella multiformis DSM
           16608]
          Length = 388

 Score =  236 bits (602), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 119/375 (31%), Positives = 199/375 (53%), Gaps = 14/375 (3%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y++++++L +NL     + + AGV+++LA K +A W  F    +Y+  TT+SSLYE  
Sbjct: 14  PMYILEEKRLRDNLKLIARVAEEAGVEIILAFKAYALWRTFPIFREYIRATTASSLYEAR 73

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI--GLRI 122
           LG E+FG  TH ++  Y D EID +      ++FN+++Q  ++  +A+  ++++  GLR+
Sbjct: 74  LGFEEFGAPTHTFSPGYTDYEIDEIARCSSHLVFNSLTQYERYHVRARMGNERLSLGLRV 133

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           NP  S  + ++ +P  P +R G   +   +    +V+G   H +CE+ S   F   L  I
Sbjct: 134 NPEYSEVETLIYNPCAPGTRFGITSEKLPDRLPDDVDGFHVHCHCESGS-DVFERTLTRI 192

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNT 241
           E  F  +  Q++WI+ GGG   T KDY V+   + L+ F E+Y   ++ LEPG A    T
Sbjct: 193 EGRFARWFPQLKWINFGGGHLMTRKDYDVQRLIRTLRGFKERYPWIKVILEPGSAFAWQT 252

Query: 242 TTLNTTVLDISENIKNLVIVDSSVE-AHVPDYLLYQESATIYPNT---------GPYTAM 291
             L   V+D+ E+      + +     H+PD L       I             G +T  
Sbjct: 253 GPLVAQVVDVVEDHGIKTAILNVSFSCHMPDCLEMPYHPAIRNARLADEDGSARGEHTYR 312

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
           +   SCL+GD  G + F+  ++ G+ I FED+  Y   +   FNGI+ P IA+ +VD  +
Sbjct: 313 MGANSCLSGDWMGSWTFDHALQTGENIIFEDMLHYTTVKTTMFNGISHPAIALLHVDNEL 372

Query: 352 KAIREFSYNDYYNNL 366
           + +RE+SY DY + +
Sbjct: 373 EMLREYSYEDYRDRM 387


>gi|328541749|ref|YP_004301858.1| diaminopimelate decarboxylase [polymorphum gilvum SL003B-26A1]
 gi|326411501|gb|ADZ68564.1| Diaminopimelate decarboxylase [Polymorphum gilvum SL003B-26A1]
          Length = 424

 Score =  236 bits (602), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 71/393 (18%), Positives = 124/393 (31%), Gaps = 28/393 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  + +      +     +  A+K  +   +  TL +   G    S  
Sbjct: 25  VGTPFYCYSTATLTRHYEVFSSAFEGIPSLVCYAMKANSNQAVLATLARLGAGMDVVSEG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118
           E+          +   ++   K     A+  + D       +  +L +    A +  +  
Sbjct: 85  ELRRARAAGVPADRIMFSGVGKTEAEQALAIDEDILCFNVESEPELVQLSRVATEKGRTA 144

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
              LRINP V           +  ++ G   +       +        V GL  H   + 
Sbjct: 145 RVSLRINPDVDARTHKKISTGKAENKFGIPWQRARALYAEAGELPGIEVTGLDMHIGSQI 204

Query: 170 KSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221
                F A      ++ ++       IE I LGGG+               ++   +K+ 
Sbjct: 205 TELEPFDAAFARLGDLVRDLRGDGHHIEHIDLGGGLGIPYVTDNAPPPHPVEYAAVVKKH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
            +K   +I  EPG  I  N   L T V+ + E + K  VIVD+++   +   L       
Sbjct: 265 VDKLGCRIIFEPGRLIAGNAGILVTRVIYVKEGHDKTFVIVDAAMNDLIRPTLYDAYHEV 324

Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                 P       A V G  C  GD          V  GD ++      Y   +   +N
Sbjct: 325 RPVRAAPADARRIRADVVGPVCETGDFLAHDRDIPEVGQGDMLAVFSAGAYGAVQAGTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY--NNL 366
              +    + N           SY+D    + L
Sbjct: 385 SRLLIPEVLVNEGEFAVVRPRPSYDDLIGLDRL 417


>gi|197104100|ref|YP_002129477.1| diaminopimelate decarboxylase [Phenylobacterium zucineum HLK1]
 gi|196477520|gb|ACG77048.1| diaminopimelate decarboxylase [Phenylobacterium zucineum HLK1]
          Length = 422

 Score =  236 bits (602), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 64/391 (16%), Positives = 123/391 (31%), Gaps = 27/391 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVK---LLLALKCFAAWGMFDTLNQYMDGTTSS 58
           + TP Y+     L  +           GVK   +  A+K  +   +  TL +   G    
Sbjct: 25  VGTPVYVYSSATLERHYTVLRDALVAHGVKDPLIAFAVKANSNVAVLRTLARLGAGADVV 84

Query: 59  SLYEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL- 114
           S  EV          E   ++   K     A    +    I   +  +L+     AQ+L 
Sbjct: 85  SEGEVRRALAAGVPPERIVFSGVGKTEAEVAFALQAGVAEINVESEPELDLVDRVAQRLG 144

Query: 115 -HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK--IESEIKNV-----NGLMFHNN 166
              +I +R+NP V           +  ++ G    +   + ++  N+      G+  H  
Sbjct: 145 VRAQIAIRVNPDVQAGGHEKISTGKSENKFGVSFSEAERLYAKASNLAGVRPVGVACHIG 204

Query: 167 CENKSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKD----FCQRLK 219
            +       +     +    +       ++E + LGGG+     + P       +   + 
Sbjct: 205 SQITDLAPMAEAFAKMRGLVERLQREGLRVERLDLGGGLGVPYFNQPEPPSPDDYAAMIA 264

Query: 220 EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDYLLYQE 277
           E      V +  EPG  I  N   L   V  + E    +  +++D+++   +   +    
Sbjct: 265 ETVGGLDVGLAFEPGRMIAANAGVLIAGVTHVHERPEGRRFLVLDAAMNDLIRPAMYDAY 324

Query: 278 S---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
               A            V G  C  GD F       P++ GD ++F     Y     + +
Sbjct: 325 HDIRAVRPREGEARPYDVVGPVCETGDTFTRDRALPPLEPGDLVAFMTAGAYGAAMASEY 384

Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           N   +    +             +Y+D    
Sbjct: 385 NSRLLVPEVLVKGAEFAVVRPRPTYDDMLAR 415


>gi|288962188|ref|YP_003452483.1| diaminopimelate decarboxylase [Azospirillum sp. B510]
 gi|288914454|dbj|BAI75939.1| diaminopimelate decarboxylase [Azospirillum sp. B510]
          Length = 419

 Score =  236 bits (602), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 61/387 (15%), Positives = 125/387 (32%), Gaps = 24/387 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+YL     L  + +            +  ALK  +   +  TL     G    S+ 
Sbjct: 25  VGTPFYLYSTAALETHYNAYAGAFAGQDAGVCYALKANSNLAVIRTLANLGAGGDVVSVG 84

Query: 62  EVMLGHEK-FGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116
           E+              ++     ++    A+ +    I   +V +L    + A   ++  
Sbjct: 85  EMKRALAGGIPAGRIVFSGVGKTREDLRIALEAGIHQINVESVPELEALSEVASSMRVEA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-----SEIKNVNGLMFHNNCENK- 170
            I LR+NP V           +  ++ G       E     + +  V  +    +  ++ 
Sbjct: 145 PIALRVNPDVDAKTHAKIATGKKENKFGIDYDHAREIYRRAAAMPGVKPVAIAVHIGSQL 204

Query: 171 ----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSE 223
                F      +  +  +       I  + LGGG+  T K+     + D+   ++  + 
Sbjct: 205 TDLAPFRAAYERVAALLHQLREDGLDINRLDLGGGLGITYKNEAPPDLADYAAMVRSITG 264

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIY 282
                I LEPG ++V N   L + V+ + +   +   IVD+++   +   L       + 
Sbjct: 265 NLGCSITLEPGRSLVGNAGILVSRVIYVKQGLHRRFAIVDAAMNDLIRPSLYDAYHGIVP 324

Query: 283 PNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                         V G  C +GD F       P+   + ++F     Y     + +N  
Sbjct: 325 VAEPAADAVQEPYDVVGPVCESGDTFAVQRPLPPLADDELVAFLSAGAYGAVMASTYNSR 384

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
            +    + N D         +  +   
Sbjct: 385 PLVPEVLVNGDRFAVIRPRPTVEEMLA 411


>gi|260428872|ref|ZP_05782849.1| diaminopimelate decarboxylase [Citreicella sp. SE45]
 gi|260419495|gb|EEX12748.1| diaminopimelate decarboxylase [Citreicella sp. SE45]
          Length = 421

 Score =  236 bits (602), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 60/392 (15%), Positives = 120/392 (30%), Gaps = 26/392 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+     LL +              +  A+K  +   +  TL     G    S  
Sbjct: 25  VGTPVYIYSTATLLRHFRLFDEALDWGPHLVCYAMKAASNQAILKTLAAAGAGMDVVSGG 84

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E          GE   ++   K  +    A+          +  ++    + A  L    
Sbjct: 85  EYARALAAGVPGERIVFSGVGKTRDEIRTALEGGIRQFNIESEPEMRAISEVASALGVVA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCEN 169
            + +R+NP V           +  ++ G           +        V G+  H   + 
Sbjct: 145 PVTVRVNPDVDARTHAKIATGKSENKFGIPIAKARQVYAEAAALPGLKVVGIDVHIGSQL 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221
                F+   + + +          +I  + LGGG+               D+ + ++  
Sbjct: 205 TELDPFALAYRKVAELTEALRADGHEISRLDLGGGLGIPYTRSNEAPPLPVDYGRLIERE 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280
                 +I +EPG  I  N   L + V+ + E   +N +I+D+++   +   +       
Sbjct: 265 LGHLGCEIEIEPGRLIAGNAGILVSEVIYVKEGEGRNFLILDAAMNDLIRPAMYDAHHDI 324

Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           I               + G  C  GD F +      ++ G  ++F     Y     + +N
Sbjct: 325 IPVVEPEPGCEQEPYDIVGPVCETGDTFAKARLMPELRAGGLVAFRSAGAYGAVMASEYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367
              +    +   D      +  S+ D  N  S
Sbjct: 385 TRALIPEVLVKDDQFAVIRQRPSFEDIINRDS 416


>gi|288802523|ref|ZP_06407962.1| carboxynorspermidine decarboxylase [Prevotella melaninogenica D18]
 gi|288335051|gb|EFC73487.1| carboxynorspermidine decarboxylase [Prevotella melaninogenica D18]
          Length = 388

 Score =  236 bits (602), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 123/375 (32%), Positives = 203/375 (54%), Gaps = 14/375 (3%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y++++ +L  NL+   ++ K A V+++LA K +A W  F    +Y+  TT+SSL+E  
Sbjct: 14  PMYVLEETRLRENLNLIAHVAKEADVEIILAFKAYALWRTFPIFREYIKATTASSLFEAR 73

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IGLRI 122
           LG E+FG  TH ++  Y D EID +      ++FN+++Q  +F  +A+  ++K   GLR+
Sbjct: 74  LGFEEFGAPTHTFSPGYTDYEIDDIARCSSHLVFNSLTQYERFHVRAKIENEKLSFGLRV 133

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           NP  S  + ++ +P  P +R G       E+  ++++G   H +CE+ S   F   L +I
Sbjct: 134 NPEYSEVETLIYNPCAPGTRFGISSDKLPETLPEDIDGFHIHCHCESGS-DVFERTLVHI 192

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNT 241
           E++F  +  Q++WI+ GGG   T KDY VK     L+ F ++Y   ++ LEPG A    T
Sbjct: 193 EEKFTKWFPQLKWINFGGGHLMTRKDYDVKRLIHVLRGFRKRYPWLKVILEPGSAFAWQT 252

Query: 242 TTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT---------GPYTAM 291
             L   V+DI E+      + ++S   H+PD L      TI             G YT  
Sbjct: 253 GPLVVQVVDIVEDYGIKTAILNASFTCHMPDCLEMPYHPTIRNAKLVDEDGTAKGEYTYR 312

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
           +   SCL+GD  G + F   +++G+ I FED+  Y   + N FNGI+ P IA+ + D  +
Sbjct: 313 LGANSCLSGDWMGSWDFGHALEVGENIIFEDMLHYTTVKTNMFNGISHPAIALLHTDNEL 372

Query: 352 KAIREFSYNDYYNNL 366
           + +RE++Y DY + +
Sbjct: 373 EMLREYTYEDYRDRM 387


>gi|91227179|ref|ZP_01261638.1| carboxynorspermidine decarboxylase [Vibrio alginolyticus 12G01]
 gi|91188707|gb|EAS74995.1| carboxynorspermidine decarboxylase [Vibrio alginolyticus 12G01]
          Length = 377

 Score =  236 bits (602), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 167/368 (45%), Positives = 241/368 (65%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPY++I++ KL+ NL+ A  ++  +GVKL+LALKCF+ WG+FD +  Y+DGTTSS  +
Sbjct: 6   LKTPYFMINEDKLIENLEKAKQLKDISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG+E FGGETHAY+V Y + ++  V   CD +IFN+ SQL  ++   +     IGLR
Sbjct: 66  EVKLGYETFGGETHAYSVGYSEDDVRDVADICDKMIFNSQSQLAAYRHIVEGKA-SIGLR 124

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP +SY+   LA+P R FSRLG +           ++G+MFH NCENK    F  +L  
Sbjct: 125 LNPGMSYAGQDLANPARQFSRLGVQADHIKPEIFDGIDGVMFHMNCENKDVDAFIGLLDA 184

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I  +FG ++ +++W+S+GGG+ FT   Y ++     LK FSEK+ VQ+YLEPGEAI+T T
Sbjct: 185 ISDQFGEYLDKLDWVSMGGGVFFTWPGYDIEKLGLALKAFSEKHGVQMYLEPGEAIITKT 244

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299
           T L  TV+DI EN+K   IVDS+ EAH  D L+Y E A+I      G +  ++   SCLA
Sbjct: 245 TDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPASILEASENGEHEYVIGSCSCLA 304

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F   +FE+P++IG R+   D AGY + + NWFNG+ MP++  +  +G I+ + EF Y
Sbjct: 305 GDQFCVANFEQPLEIGQRLHILDSAGYTMVKLNWFNGLRMPSVYCERSNGDIQKLNEFDY 364

Query: 360 NDYYNNLS 367
           +D+  +LS
Sbjct: 365 SDFKRSLS 372


>gi|119475311|ref|ZP_01615664.1| diaminopimelate decarboxylase [marine gamma proteobacterium
           HTCC2143]
 gi|119451514|gb|EAW32747.1| diaminopimelate decarboxylase [marine gamma proteobacterium
           HTCC2143]
          Length = 415

 Score =  236 bits (602), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 58/385 (15%), Positives = 114/385 (29%), Gaps = 24/385 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L     +           +  A+K  +   + + L +   G    S  E
Sbjct: 26  GTPTYVYSRGYLEQQFLSYQRALAGRQHMICYAVKANSNIAVLNVLARLGAGFDIVSGGE 85

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++           A+ +        + S+L   +  A  L     
Sbjct: 86  LERVLAAGGDPAKVVFSGVAKTPAEMRQALEAGIHCFNLESESELGVLQQVAADLGVSAS 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCE-- 168
           I +R+NP V  +           ++ G          +   +    N+ G+  H   +  
Sbjct: 146 ISIRVNPDVDANTHPYISTGLKENKFGIDIDRAPAVYRRARDLSHINIIGVDCHIGSQLV 205

Query: 169 -NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE---FSEK 224
               FL     L  +     +    I  + LGGG+     D       + +++       
Sbjct: 206 DTTPFLDALDRLLKLIDTLANDGIHISHLDLGGGLGVCYTDEQPPSPAEYIEKVLTHIGD 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES----A 279
             + +  EPG +I  N   L T V  +  N +    ++D+++   +   L          
Sbjct: 266 RDITLAFEPGRSICANAGVLLTKVEYLKCNPEKNFAVIDAAMNDMIRPALYQAWMDIKAV 325

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
               N    T  + G  C  GD  G+      ++ GD +S      Y     + +N    
Sbjct: 326 CPRKNEPTKTWDIVGPVCETGDFLGKDRQL-ELREGDLLSVSSAGAYGFTMSSNYNSRVR 384

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
               + + D         +  D   
Sbjct: 385 AAEVMVDGDDVHLIRARETVADLMQ 409


>gi|157737938|ref|YP_001490622.1| carboxynorspermidine decarboxylase [Arcobacter butzleri RM4018]
 gi|157699792|gb|ABV67952.1| carboxynorspermidine decarboxylase [Arcobacter butzleri RM4018]
          Length = 381

 Score =  236 bits (602), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 140/370 (37%), Positives = 215/370 (58%), Gaps = 7/370 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P Y+ +++ L  NL     ++  A + +LLALK FA    FD   +Y+ G  +S L+
Sbjct: 14  LPSPAYVCEEELLEKNLKLLKRVQDEADISILLALKGFAMHSTFDLCKKYLKGCCASGLH 73

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E +L  E+FG E H Y+ A+KD EID +++  + ++FN+ SQL +FKDKA      +G+R
Sbjct: 74  EAILAKEEFGKEVHTYSPAFKDEEIDEIVAISNHLVFNSFSQLKRFKDKAYGKVS-LGIR 132

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP  S  +  L +P  P+SR+G    +  ES ++ ++G  FH  CE          L+ 
Sbjct: 133 LNPEYSSVEVDLYNPCAPYSRMGTTKANFDESLLEFLDGFHFHALCEQN-VDALEGALEA 191

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240
            EK F  +  +++W++ GGG H T  DY V+   + LK+F  +Y   ++Y+EPGEAI   
Sbjct: 192 FEKNFSQYFDRLKWVNFGGGHHITRADYDVEGLIKLLKDFKSRYPHLKVYMEPGEAIGWQ 251

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296
           T  L  TVLDI  N  +L I+D+S EAH+PD L     A I      N  PYT    G +
Sbjct: 252 TGYLVATVLDIVYNGMDLAILDTSAEAHMPDTLAMPYRAMIRNSGLANEKPYTYRFGGNT 311

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CL+GDI G++ F++P+K+GD+I  ED+  Y + +   FNGI +P+I +KN + + K ++ 
Sbjct: 312 CLSGDIIGDYSFDEPLKVGDKIILEDMIHYTMVKTTTFNGIKLPSIVIKNKENSYKIVKN 371

Query: 357 FSYNDYYNNL 366
           F YNDY   L
Sbjct: 372 FGYNDYKMRL 381


>gi|54310576|ref|YP_131596.1| putative diaminopimelate decarboxylase [Photobacterium profundum
           SS9]
 gi|46915019|emb|CAG21794.1| putative diaminopimelate decarboxylase [Photobacterium profundum
           SS9]
          Length = 416

 Score =  236 bits (601), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 61/383 (15%), Positives = 114/383 (29%), Gaps = 24/383 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  + +       +    +  A+K  +  G+ + L +   G    S  E
Sbjct: 27  GTPLYVYSRATLERHWNAFDQAVIDHPHLICYAVKANSNIGVLNVLARLGSGFDIVSQGE 86

Query: 63  VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117
           +              ++   K       A+          +  +L +    A +  L   
Sbjct: 87  LERVITAGGDPAKVVFSGVGKTAVEMKRALELGIKCFNVESEPELERLNQVASELGLVAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LRINP V              ++ G   +  +E           NV G+  H   +  
Sbjct: 147 ISLRINPDVDAQTHPYISTGLRDNKFGIFFERAVEVYRLAHSLPNLNVVGMDCHIGSQLT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSE 223
           +   F         +          I+ + +GGG+  T  +     P +     L    E
Sbjct: 207 NIDPFIDATDRLLALIDTLKAEGIVIKHLDVGGGLGVTYNEEQPPLPSEYASALLARLGE 266

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279
              +++  EPG AI  N   L T V  +         IVD+++   +   L         
Sbjct: 267 HSDLELIFEPGRAIAANAGVLLTRVEFLKHTDYKNFAIVDAAMNDLIRPTLYQAWQNIVP 326

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            +       T  + G  C  GD  G+      +  GD ++      Y     + +N    
Sbjct: 327 VVPREGEAKTYDLVGPICETGDFIGKDRELC-LAPGDLLAVRSAGAYGFVMSSNYNTRTR 385

Query: 340 PTIAVKNVDGTIKAIREFSYNDY 362
               + + +            + 
Sbjct: 386 AAEIMVDGNTAHVVREREKLAEL 408


>gi|296271966|ref|YP_003654597.1| diaminopimelate decarboxylase [Arcobacter nitrofigilis DSM 7299]
 gi|296096141|gb|ADG92091.1| diaminopimelate decarboxylase [Arcobacter nitrofigilis DSM 7299]
          Length = 402

 Score =  236 bits (601), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 61/383 (15%), Positives = 123/383 (32%), Gaps = 21/383 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTPYY+ D   + +  +      +     +  A+K  +   +   L     G    S+ E
Sbjct: 13  KTPYYVYDFDHITSQYNELKDAFRARKSLVAYAVKANSNLSVIKHLANLGAGADCVSIGE 72

Query: 63  VMLGHE-KFGGETHAYNV-AYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIG 119
           V    +         ++     D EI   LS     I   + ++LN+ +  A++L K   
Sbjct: 73  VRRALKVGIAPYKIIFSGVGKIDAEIREALSLDILMINVESDAELNRVEMIAKELDKIAR 132

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           +  R+NP++              ++ G          I+          G+  H   +  
Sbjct: 133 ISIRVNPNIDPQTHPYISTGLHENKFGVDIDTAKRMYIQCKNSDNLDPVGIHLHIGSQLT 192

Query: 171 SFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                   +K +    +       ++ ++ +GGG+     +       ++ Q + E    
Sbjct: 193 QLDPIKESVKIVADLVRNLKAIKIELSFMDIGGGLGIVYDNEKLIDTNEYAQSVLETMFG 252

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLL--YQESATI 281
             + +  EPG  +V N     T VL       K  VIVD ++   +   L     +   I
Sbjct: 253 LDITVVCEPGRFMVGNAGIFITKVLYEKVNGNKRFVIVDGAMNDLIRPALYNAQHKIEVI 312

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
             ++      + G  C +GD F +       +  D ++      Y     + +N      
Sbjct: 313 DKSSDISDCNLVGPICESGDFFAKNIELPKTEHNDLVAIYSAGAYCFTMASNYNTRGRVA 372

Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364
                        +  ++ D   
Sbjct: 373 EIAVENGKDRLIRKRETFEDIIA 395


>gi|148252717|ref|YP_001237302.1| diaminopimelate decarboxylase [Bradyrhizobium sp. BTAi1]
 gi|146404890|gb|ABQ33396.1| diaminopimelate decarboxylase [Bradyrhizobium sp. BTAi1]
          Length = 421

 Score =  236 bits (601), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 59/390 (15%), Positives = 108/390 (27%), Gaps = 28/390 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +            V +  A+K  +   +  TL +   G    S  
Sbjct: 25  VGTPFYCYSTATLERHYRVFAEAFTGQDVLICYAMKANSNQSVLRTLAKLGAGADVVSGG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118
           E+              ++   K           D   +   +  +L+     A +     
Sbjct: 85  ELKRALAAGIPARKIVFSGVGKTEAELRAALAADIHCLNIESEPELDLLARLANETGHTA 144

Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCEN 169
            +  R+NP V           +  ++ G   +          + +   V G+  H   + 
Sbjct: 145 RISVRVNPDVDAGTHAKISTGKSENKFGIPLEHARKVYARAAKMKGIEVTGVDVHIGSQI 204

Query: 170 KSFLCFSAML---KNIEKEFGHFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEF 221
                            +        I  +  GGG+                +   +K  
Sbjct: 205 TDLGPMETAFRILAEFVQTLRADGHTISHVDFGGGLGIPYHMDRAVPPEPAAYAAMVKRV 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
           S      +  EPG  IV N   L   V+ +     KN VI+D+++   +    LY+    
Sbjct: 265 SHNLGCTLMFEPGRMIVGNAGILVAKVIYVKHGEAKNFVIIDAAMNDLIRPT-LYEAHHD 323

Query: 281 IYPNTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
           I P   P        A V G  C +GD           + GD ++      Y   +   +
Sbjct: 324 ILPVIQPAPNAPAFVADVVGPVCESGDYLALDRTLPEPRPGDLLAIMTSGAYGAVQACTY 383

Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           N   +    +   D +              
Sbjct: 384 NTRALVPEVLVKGDQSAVIRPRIEVEQLIA 413


>gi|194100049|ref|YP_002003189.1| LysA [Neisseria gonorrhoeae NCCP11945]
 gi|193935339|gb|ACF31163.1| LysA [Neisseria gonorrhoeae NCCP11945]
          Length = 406

 Score =  236 bits (601), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 67/385 (17%), Positives = 127/385 (32%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L    +            +  A+K      +         G    S  E
Sbjct: 18  GTPLYVYSQSALTGAFENYQTAFAALNPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77

Query: 63  VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G   +T    V   + EI+ A+ +        ++ ++++ +  A +L     
Sbjct: 78  LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKIAARLGKTAP 137

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D +E+           + G+  H   +  
Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLT 197

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                    + I             +E + LGGG+    KD     +  + + +++    
Sbjct: 198 DLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYKDEGVPDLGAYARAVQKLMGT 257

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++ LEPG ++V N   L T V  +     KN V+VD+++   +   L          
Sbjct: 258 RRLKLILEPGRSLVGNAGALLTRVEFVKHGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317

Query: 284 NTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
            T    P TA + G  C  GD  G+       + GD +       Y  +  + +N  N  
Sbjct: 318 ETKNIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLDLRSAGAYGASMASNYNTRNRA 376

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + +  G     R  +      N
Sbjct: 377 AEVLVDGGGYKLIRRRETLEQQMAN 401


>gi|288799949|ref|ZP_06405408.1| carboxynorspermidine decarboxylase [Prevotella sp. oral taxon 299
           str. F0039]
 gi|288333197|gb|EFC71676.1| carboxynorspermidine decarboxylase [Prevotella sp. oral taxon 299
           str. F0039]
          Length = 390

 Score =  236 bits (601), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 125/380 (32%), Positives = 196/380 (51%), Gaps = 16/380 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           IK P Y++++Q L  NL     + + A V+++LA K +A W  F    +Y++ TT+SSL 
Sbjct: 11  IKEPTYILEEQLLRRNLTLISNVAQKADVEIILAFKAYALWKTFPIFKEYINATTASSLS 70

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ--KLHKKIG 119
           E  LG+++FG  TH ++ AY D EID + S    + FN++SQ  +F  +A   +    IG
Sbjct: 71  EAKLGYQEFGSLTHTFSPAYIDYEIDEIASCSSHLTFNSLSQYERFSGRAISVQPEISIG 130

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           LR+NP  S     L +P  P +R G       +     + G   H +CE+ S   F   L
Sbjct: 131 LRVNPEYSEVGTDLYNPCAPGTRFGVSADKLPKKLPSLLEGFHCHCHCESGS-DVFVRTL 189

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238
           K+IE++F  + +Q++WI+ GGG   T  DY V+     L+EF ++Y    + LEPG A  
Sbjct: 190 KHIEEKFSPWFSQLKWINFGGGHLMTRSDYDVELLISTLQEFKKRYPHLHVILEPGSAFA 249

Query: 239 TNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP-----------NTG 286
             T  L   V+DI E+      + D S   H+PD L       +                
Sbjct: 250 WQTGPLVAHVVDIVEDKGYQTAILDVSFTCHMPDCLEMPYMPVVRNAVIAEEEEAQPEDY 309

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
            Y     G SCL+GD  G++ F+  +++G+ I FED+  Y   + N FNGI  P+IA+  
Sbjct: 310 RYRYRFGGNSCLSGDFMGDWIFDHELQVGENIIFEDMLHYTTVKTNMFNGITHPSIALLK 369

Query: 347 VDGTIKAIREFSYNDYYNNL 366
            +G ++ +R+++Y DY N +
Sbjct: 370 TNGELEILRKYTYKDYKNRM 389


>gi|312884202|ref|ZP_07743913.1| diaminopimelate decarboxylase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309368130|gb|EFP95671.1| diaminopimelate decarboxylase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 417

 Score =  236 bits (601), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 57/381 (14%), Positives = 110/381 (28%), Gaps = 24/381 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  + +       +    +  A+K  +  G+ +TL +   G    S  E
Sbjct: 27  GTPLYVYSRATLERHWNAFDSAVGDHPHLVCYAVKANSNLGVLNTLARLGSGFDIVSGGE 86

Query: 63  V-MLGHEKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +  +       +   ++   K       A+          +  +L +    A +L     
Sbjct: 87  LERVIAAGGDPKKVVFSGVGKTRAEMKRALELGIKCFNVESEPELERLNQVAGELGVVAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           I LRINP V              ++ G   +                + G+  H   +  
Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGIAFERASTVYDFAQSLPHLSIKGIDCHIGSQLT 206

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F         +  +       I  + +GGG+           P       L     
Sbjct: 207 EIEPFIDATDRLLKLIDDLKTQGINIRHLDVGGGLGVVYRDELPPQPSDYAKALLARLDG 266

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279
              +++  EPG AI  N   L T V  +         I+D+++   +   L         
Sbjct: 267 HKELELIFEPGRAIAANAGILLTRVEFLKHTEHKNFAIIDAAMNDLMRPALYQAWQEIVP 326

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            +       T  + G  C  GD  G+      ++ GD ++      Y     + +N    
Sbjct: 327 VVPRKGETQTYDLVGPICETGDFLGKDRELV-LREGDLLAVRSSGAYGFVMASNYNTRVR 385

Query: 340 PTIAVKNVDGTIKAIREFSYN 360
               + +   T    +     
Sbjct: 386 SAEVMVDGHKTHLVRQREELE 406


>gi|254507969|ref|ZP_05120097.1| carboxynorspermidine decarboxylase [Vibrio parahaemolyticus 16]
 gi|219549077|gb|EED26074.1| carboxynorspermidine decarboxylase [Vibrio parahaemolyticus 16]
          Length = 379

 Score =  236 bits (601), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 168/368 (45%), Positives = 244/368 (66%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPY++I++ KL+ NL+ A  +++ +GVKL+LALKCF+ WG+FD +  Y+DGTTSS  +
Sbjct: 8   LKTPYFMINEDKLIENLEKAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPF 67

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG+E FGGETHAY+V Y + ++  V   CD +IFN+ SQL  ++   +     IGLR
Sbjct: 68  EVKLGYETFGGETHAYSVGYSEDDVREVADICDKMIFNSQSQLAAYRHIVEGKA-SIGLR 126

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP VSY+   LA+P R FSRLG +           ++G+MFH NCENK    F  +L +
Sbjct: 127 LNPGVSYAGQDLANPARQFSRLGVQADHIKPEIFDGIDGVMFHMNCENKDVDAFIGLLDS 186

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I ++FG ++ +++W+S+GGG+ FT   Y ++     LK FSEK+ VQ+YLEPGEAI+T T
Sbjct: 187 ISEQFGEYLDKLDWVSMGGGVFFTWPGYDIEKLGLALKAFSEKHGVQMYLEPGEAIITKT 246

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299
           T L  TV+DI EN+K   IVDS+ EAH  D L+Y E A+I      G +  ++   SCLA
Sbjct: 247 TDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPASILEASENGDHEYVIGSCSCLA 306

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F   +FE+P++IG R+   D AGY + + NWFNG+ MP++  +  +G I+ + EF Y
Sbjct: 307 GDQFCVANFEQPLEIGQRLHILDSAGYTMVKLNWFNGLRMPSVYCERSNGDIQKLNEFDY 366

Query: 360 NDYYNNLS 367
           +D+  +LS
Sbjct: 367 SDFKRSLS 374


>gi|90414245|ref|ZP_01222225.1| putative diaminopimelate decarboxylase [Photobacterium profundum
           3TCK]
 gi|90324692|gb|EAS41233.1| putative diaminopimelate decarboxylase [Photobacterium profundum
           3TCK]
          Length = 416

 Score =  236 bits (601), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 61/383 (15%), Positives = 114/383 (29%), Gaps = 24/383 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  + +       +    +  A+K  +  G+ + L +   G    S  E
Sbjct: 27  GTPLYVYSRATLERHWNAFDQAVTDHPHLICYAVKANSNIGVLNVLARLGSGFDIVSQGE 86

Query: 63  VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++   K       A+          +  +L +    A +L     
Sbjct: 87  LERVITAGGDPAKVVFSGVGKTAVEMKRALELGIKCFNVESEPELERLNQVASELGVIAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LRINP V              ++ G   +  +E           NV G+  H   +  
Sbjct: 147 ISLRINPDVDAQTHPYISTGLRDNKFGIFFERAVEVYRLAHSLPNLNVVGMDCHIGSQLT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSE 223
           +   F         +          I+ + +GGG+  T  +     P +     L    E
Sbjct: 207 NIDPFIDATDRLLALIDTLKAEGIVIKHLDVGGGLGVTYSEEQPPLPSEYATALLARLGE 266

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279
              +++  EPG AI  N   L T V  +         IVD+++   +   L         
Sbjct: 267 HSELELIFEPGRAIAANAGVLLTRVEFLKHTDYKNFAIVDAAMNDLIRPTLYQAWQNIVP 326

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            +       T  + G  C  GD  G+      +  GD ++      Y     + +N    
Sbjct: 327 VVPRKGETKTYDLVGPICETGDFIGKDRELC-LAPGDLLAVRSAGAYGFVMSSNYNTRTR 385

Query: 340 PTIAVKNVDGTIKAIREFSYNDY 362
               + + +            + 
Sbjct: 386 AAEIMVDGNTAHVVREREKLAEL 408


>gi|332977382|gb|EGK14160.1| diaminopimelate decarboxylase [Desmospora sp. 8437]
          Length = 444

 Score =  236 bits (601), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 66/398 (16%), Positives = 128/398 (32%), Gaps = 35/398 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++D+  +   + + +   +  G   ++  A K F+   M   + +        S 
Sbjct: 30  GTPLYVMDETMIRRRIRSFVEAFEKTGLSYRMAYASKAFSTLAMCRLVAEEGLHLDVVSD 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E   ++   K  D  + A+ +     + +  ++L      A+   ++
Sbjct: 90  GELYTALKAGFPPERIYFHGNNKTLDELVMALDAGIGRFVADNFTELALLDQLARDRGRR 149

Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNN 166
           +   LR  P V           +  S+ G   +           + SE     G   H  
Sbjct: 150 VKVILRTTPGVEAHTHHYIQTGQEDSKFGFDLESGQVHQALKQCLTSEGLEPEGFHCHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFC------- 215
            +      F   ++ +             +   ++LGGG      +              
Sbjct: 210 SQIFESDGFRLAVRKMAALAAECRQSLGFRTRILNLGGGFGIRYNEKDQPMPVDHYIAAI 269

Query: 216 --QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271
             +  + F+     QI+LEPG +IV    T    V  + E    +  V VD  +  +   
Sbjct: 270 AEEVRQGFAGGELPQIWLEPGRSIVGEAGTTLYRVGTVKEIPGLRKYVAVDGGMNDNPRP 329

Query: 272 YLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
            L +       A         T  + G+ C +GD+         V  GD ++      YN
Sbjct: 330 ALYHASYEASLANRAGEEPAETVSIAGKLCESGDMLIWDIPLPRVNTGDLLAVSCTGAYN 389

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            +  N +N +  P +         + +R  +  D   N
Sbjct: 390 YSMANNYNRLRRPAVVFVRDGEASEVVRRETLEDLIRN 427


>gi|77359070|ref|YP_338645.1| diaminopimelate decarboxylase [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76873981|emb|CAI85202.1| putative diaminopimelate decarboxylase [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 417

 Score =  236 bits (601), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 63/387 (16%), Positives = 118/387 (30%), Gaps = 26/387 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +     +        KN    +  A+K  +   + + L +   G    S  E
Sbjct: 26  GTPCYVYSRATFERHYLAFANATKNHKSLVCYAVKANSNIAVLNILARLGSGFDIVSKGE 85

Query: 63  -VMLGHEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLH--KK 117
              +           ++   K  +  A             +VS+L +  + A +L+    
Sbjct: 86  LARVIKAGGDASKVVFSGVAKTADEIAYALKLGIKCFNVESVSELERISEVACELNLAAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           I +R+NP +              ++ G   +  +            N+ G+  H   +  
Sbjct: 146 ISIRVNPDIDAKTHPYISTGLKENKFGIDIQTAVSVYQHAASLPGLNIIGVDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F   L     +  E      ++  + +GGG+  T       +P +   Q  +    
Sbjct: 206 ETRPFLEALDKLLTLIDELKACNIELTHLDIGGGLGVTYNDEQPPHPSEYAAQVTERLVN 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIY 282
              +++  EPG AI  N   L T V  I +N      IVD+ +   +   L       I 
Sbjct: 266 YRHLELIFEPGRAIAANAGVLVTQVEFIKQNQDKYFAIVDAGMNDMLRPALYQAWQKIIP 325

Query: 283 -----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                  T  +   + G  C  GD  G+      +K GD +       Y     + +N  
Sbjct: 326 VSVRDDETPTHNFDIVGPVCETGDFLGKDRELA-LKQGDLLVQRSAGAYGFTMSSNYNSR 384

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
                 + +           +    Y 
Sbjct: 385 PRVAEIMVDGSQHHLIRERETIESLYQ 411


>gi|28898714|ref|NP_798319.1| carboxynorspermidine decarboxylase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260362645|ref|ZP_05775545.1| carboxynorspermidine decarboxylase [Vibrio parahaemolyticus K5030]
 gi|260879746|ref|ZP_05892101.1| carboxynorspermidine decarboxylase [Vibrio parahaemolyticus
           AN-5034]
 gi|260898780|ref|ZP_05907221.1| carboxynorspermidine decarboxylase [Vibrio parahaemolyticus
           Peru-466]
 gi|260901593|ref|ZP_05909988.1| carboxynorspermidine decarboxylase [Vibrio parahaemolyticus AQ4037]
 gi|28806932|dbj|BAC60203.1| carboxynorspermidine decarboxylase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308086612|gb|EFO36307.1| carboxynorspermidine decarboxylase [Vibrio parahaemolyticus
           Peru-466]
 gi|308093399|gb|EFO43094.1| carboxynorspermidine decarboxylase [Vibrio parahaemolyticus
           AN-5034]
 gi|308108689|gb|EFO46229.1| carboxynorspermidine decarboxylase [Vibrio parahaemolyticus AQ4037]
 gi|308114223|gb|EFO51763.1| carboxynorspermidine decarboxylase [Vibrio parahaemolyticus K5030]
          Length = 377

 Score =  236 bits (601), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 167/368 (45%), Positives = 244/368 (66%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPY++I++ KL+ NL+ A  +++ +GVKL+LALKCF+ WG+FD +  Y+DGTTSS  +
Sbjct: 6   LKTPYFMINEDKLIANLEKAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG+E FGGETHAY+V Y + ++  V   CD +IFN+ SQL  ++   +     IGLR
Sbjct: 66  EVKLGYETFGGETHAYSVGYSEDDVREVADICDKMIFNSQSQLAAYRHIVEGKA-SIGLR 124

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP VSY+   LA+P R FSRLG +         + ++G+MFH NCENK    F  +L  
Sbjct: 125 LNPGVSYAGQDLANPARKFSRLGVQADHIKPEVFEGIDGVMFHMNCENKDVDAFIGLLDA 184

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I ++FG ++ +++W+S+GGG+ FT   Y ++     LK FSEK+ VQ+YLEPGEAI+T T
Sbjct: 185 ISEQFGEYLNKLDWVSMGGGVFFTWPGYDIEKLGLALKAFSEKHGVQMYLEPGEAIITKT 244

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299
           T L  TV+DI EN+K   IVDS+ EAH  D L+Y E A+I    + G +  ++   SCLA
Sbjct: 245 TDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPASILEASDNGEHEYVIGSCSCLA 304

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F   +F++P++IG R+   D AGY + + NWFNG+ MP++  +   G I+ + EF Y
Sbjct: 305 GDQFCVANFDQPLEIGQRLHILDSAGYTMVKLNWFNGLRMPSVYCERSSGEIQKLNEFDY 364

Query: 360 NDYYNNLS 367
           +D+  +LS
Sbjct: 365 SDFKRSLS 372


>gi|117918847|ref|YP_868039.1| diaminopimelate decarboxylase [Shewanella sp. ANA-3]
 gi|117611179|gb|ABK46633.1| diaminopimelate decarboxylase [Shewanella sp. ANA-3]
          Length = 414

 Score =  236 bits (601), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 59/382 (15%), Positives = 107/382 (28%), Gaps = 23/382 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  +   + + L +   G    S  E
Sbjct: 26  GTPLYIYSRATLERHWHAFNNAVADHPHLVCYAVKANSNLAVLNVLARLGSGFDIVSGGE 85

Query: 63  -VMLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
              +           ++   K       A+          + ++L +  D A +L K   
Sbjct: 86  LARVIEAGGDPAKVVFSGVGKTVAEMEQALNLGIYCFNVESSAELEQLNDVAGRLGKVAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    +               V G+  H   +  
Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIAMDEAEVVFARAHALPHLQVKGVDCHIGSQLT 205

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
               F   +  +             IE   +GGG+  T  D        +   L      
Sbjct: 206 EIQPFLDAMDRMLALIDRLADQGIVIEHFDVGGGLGVTYDDETPPHPDVYAAALLARLGD 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQE---SAT 280
             +++  EPG AI  N     T VL +   + K   IVD ++   +   L          
Sbjct: 266 RKLKLIFEPGRAIAANAGIFVTQVLYLKENSDKRFAIVDGAMNDLIRPALYSAWQNIIPV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              +       + G  C  GD  G+      +  GD +       Y     + +N     
Sbjct: 326 NPRDEQAQVFDIVGPVCETGDFLGKDRALA-IAAGDLLVVRSSGAYGFAMASNYNTRPRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDY 362
              + + D              
Sbjct: 385 AEVMVDGDKAYLVREREKLAQL 406


>gi|332534419|ref|ZP_08410259.1| diaminopimelate decarboxylase [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332036153|gb|EGI72628.1| diaminopimelate decarboxylase [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 417

 Score =  236 bits (601), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 60/387 (15%), Positives = 113/387 (29%), Gaps = 26/387 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +     +        KN    +  A+K  +   + + L +   G    S  E
Sbjct: 26  GTPCYVYSRATFERHYLAFANATKNHKSLVCYAVKANSNIAVLNILARLGSGFDIVSKGE 85

Query: 63  -VMLGHEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQ--KLHKK 117
              +           ++   K  +  A             + S+L +  + A    L   
Sbjct: 86  LARVIKAGGDASKVVFSGVAKTSDEIAYALKLGIKCFNVESASELERISEVACELNLEAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCENK 170
           I +R+NP +              ++ G          +         V G+  H   +  
Sbjct: 146 ISIRVNPDIDAKTHPYISTGLKENKFGIDIQTAVSVYQQAAALPGLKVIGVDCHIGSQLT 205

Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F   L  +            ++  + +GGG+          +P +   Q  +  + 
Sbjct: 206 QVRPFLEALDKLMALIDELKTNGIELTHLDIGGGLGVPYDNEQPPHPSEYAAQVTERLAN 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIY 282
              +++  EPG AI  N   L T V  I +N      IVD+ +   +   L       I 
Sbjct: 266 YKHLELIFEPGRAIAANAGILVTQVEFIKQNQDKFFAIVDAGMNDMLRPALYQAWQKIIP 325

Query: 283 -----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                  T  +   + G  C  GD  G+      +K GD ++      Y     + +N  
Sbjct: 326 VSVRDDETPTHNFDIVGPVCETGDFLGKDRELA-LKQGDLLAQRSAGAYGFTMSSNYNSR 384

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
                 + +           +    Y 
Sbjct: 385 PRVAEIMVDGQQHHLIRERETIESLYQ 411


>gi|332289594|ref|YP_004420446.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein
           [Gallibacterium anatis UMN179]
 gi|330432490|gb|AEC17549.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein
           [Gallibacterium anatis UMN179]
          Length = 417

 Score =  236 bits (601), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 62/384 (16%), Positives = 114/384 (29%), Gaps = 25/384 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +        +     +  A+K      + + L +   G    S  E
Sbjct: 26  GTPLYVYSRATLERHWHAFDSALQGHPHLICFAVKSNPNIALLNLLAKLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++   K                   + ++L +    A+KL     
Sbjct: 86  LERVLAAGGEANKVVFSGVAKSHTEIERALEVGIRCFNVESEAELLRINQVAEKLGKKAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G   +   E            + G+  H   +  
Sbjct: 146 ISLRVNPDVDAKTHPYISTGLKKNKFGVSVERAREVYRLAKTLPHIQIVGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F         + ++      +++ + LGGG+          +P +     L +F +
Sbjct: 206 ELQPFLDSADRLLVLLEQLRQDGIELQHLDLGGGLGVRYSDETPPHPTEYASALLAKFKQ 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIY 282
              ++I LEPG AI  N   L T V  +  N      IVD+ +   +   L       I 
Sbjct: 266 YPELEIILEPGRAISANAGILVTKVEYLKSNEDFNFAIVDAGMNDMIRPALYQAYMEIIE 325

Query: 283 PNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +           V G  C   D  G+      +  GD I       Y  +  + +N   
Sbjct: 326 ADRTLDRERKVYDVVGPICETSDFLGKGRSLA-IAAGDFIVQRSAGAYGASMASNYNSHP 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362
                + + D      R   + + 
Sbjct: 385 RAAEVLVDGDKAHLIKRRERFEEL 408


>gi|262172884|ref|ZP_06040562.1| diaminopimelate decarboxylase [Vibrio mimicus MB-451]
 gi|261893960|gb|EEY39946.1| diaminopimelate decarboxylase [Vibrio mimicus MB-451]
          Length = 417

 Score =  236 bits (601), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 57/380 (15%), Positives = 111/380 (29%), Gaps = 24/380 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  +  G+ +TL +   G    S+ E
Sbjct: 27  GTPLYVYSRATLERHWHAFDKSVGDYPHLICYAVKANSNLGVLNTLARLGSGFDIVSVGE 86

Query: 63  VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++   K       A+          +  +L++    A +L     
Sbjct: 87  LERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKIKCFNVESERELHRLNKVAAELGVKAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LRINP V              ++ G       E           +V+G+  H   +  
Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGITFDRAAEVYRLAHSLPHLDVHGIDCHIGSQLT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
           +   F         +          I  + +GGG+    +D       +  K   ++   
Sbjct: 207 ALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGGLGVVYRDELPPQPSEYAKALLDRLER 266

Query: 228 QI----YLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQE---SA 279
                   EPG AI  N   L T V  +         I+D+++   +   L         
Sbjct: 267 HRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHKNFAIIDAAMNDLIRPALYQAWQDIIP 326

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                    T  + G  C   D  G+      ++ GD ++      Y     + +N    
Sbjct: 327 LRPRQGEAQTYDLVGPVCETSDFLGKDRDLV-LEEGDLLAVRSSGAYGFTMSSNYNSRPR 385

Query: 340 PTIAVKNVDGTIKAIREFSY 359
               + + +      +  + 
Sbjct: 386 VAEVMVDGNKAHLVRQRETL 405


>gi|258622843|ref|ZP_05717860.1| diaminopimelate decarboxylase [Vibrio mimicus VM573]
 gi|258584904|gb|EEW09636.1| diaminopimelate decarboxylase [Vibrio mimicus VM573]
          Length = 439

 Score =  236 bits (601), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 57/380 (15%), Positives = 111/380 (29%), Gaps = 24/380 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  +  G+ +TL +   G    S+ E
Sbjct: 49  GTPLYVYSRATLERHWHAFDKSVGDYPHLICYAVKANSNLGVLNTLARLGSGFDIVSVGE 108

Query: 63  VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++   K       A+          +  +L++    A +L     
Sbjct: 109 LERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKIKCFNVESERELHRLNKVAAELGVKAP 168

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LRINP V              ++ G       E           +V+G+  H   +  
Sbjct: 169 ISLRINPDVDAKTHPYISTGLRDNKFGITFDRAAEVYRLAHSLSHLDVHGIDCHIGSQLT 228

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
           +   F         +          I  + +GGG+    +D       +  K   ++   
Sbjct: 229 ALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGGLGVVYRDELPPQPSEYAKALLDRLER 288

Query: 228 QI----YLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQE---SA 279
                   EPG AI  N   L T V  +         I+D+++   +   L         
Sbjct: 289 HRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHKNFAIIDAAMNDLIRPALYQAWQDIIP 348

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                    T  + G  C   D  G+      ++ GD ++      Y     + +N    
Sbjct: 349 LRPRQGEAQTYDLVGPVCETSDFLGKDRDLV-LEEGDLLAVRSSGAYGFTMSSNYNSRPR 407

Query: 340 PTIAVKNVDGTIKAIREFSY 359
               + + +      +  + 
Sbjct: 408 VAEVMVDGNKAHLVRQRETL 427


>gi|119503712|ref|ZP_01625794.1| putative diaminopimelate decarboxylase [marine gamma
           proteobacterium HTCC2080]
 gi|119460220|gb|EAW41313.1| putative diaminopimelate decarboxylase [marine gamma
           proteobacterium HTCC2080]
          Length = 418

 Score =  236 bits (601), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 58/380 (15%), Positives = 112/380 (29%), Gaps = 23/380 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +            +    +  A+K  +   +   L +   G    SL E
Sbjct: 26  GTPLYVYSRACIEQAYLAYQTALADHDHLICYAVKANSNLAILSVLAKLGAGFDIVSLGE 85

Query: 63  V-MLGHEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117
           +  +           ++   K       A+          + S+L    + AQ   +   
Sbjct: 86  LERVIAAGGDPTKVVFSGVCKTHAAIKRALEVGIHCFNVESESELEALSEVAQASGMVAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV-------NGLMFHNNCENK 170
           I LR+NP V              ++ G +    +    K V        G+  H   +  
Sbjct: 146 ISLRVNPDVDAQTHPYIATGLKDNKFGVELDSALRLYRKAVALPGIKPIGIDCHIGSQIL 205

Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLK---EFSEK 224
               FS  + ++     +       +E I LGGG+     +         +    +    
Sbjct: 206 DIAPFSEAMDHLIDVLENLKSEGIMLEHIDLGGGLGIPYGNENAPKIADYVAALTQGLSD 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQES---AT 280
           +S+ + LEPG +IV     L T V+ +          VD+++   +   L          
Sbjct: 266 HSLTLILEPGRSIVAEAGVLLTEVMYLKPTPHKNFALVDAAMNDLLRPALYGAWQDIVPL 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              N       + G  C  GD  G+      +  GD ++      Y     + +N     
Sbjct: 326 NNRNGDAKCWDIVGPVCETGDFLGKDRNLS-LTEGDVLAVMTAGAYGFVMASNYNTRPRS 384

Query: 341 TIAVKNVDGTIKAIREFSYN 360
              + +   +          
Sbjct: 385 AEVMVDGSHSHLIRAREPLE 404


>gi|118602155|ref|YP_903370.1| diaminopimelate decarboxylase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|118567094|gb|ABL01899.1| diaminopimelate decarboxylase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 415

 Score =  236 bits (601), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 60/386 (15%), Positives = 125/386 (32%), Gaps = 24/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           ++P Y+  +  + NN              +  A+K  +   + + L++   G    S+ E
Sbjct: 25  ESPLYVYSRTDIENNWYEFDQAFGTHPHLVCYAVKANSNLAVLNVLSKIGSGFDIVSIGE 84

Query: 63  VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++   K       A+          +++++N+ +  A+ +    +
Sbjct: 85  LERVLFAGADASRCVFSGVAKTKFEIKRALEVGIFCFNVESMAEMNRIEQVAKDMGTQAQ 144

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           I LRINP+V              ++ G    D +        S    V GL  H   +  
Sbjct: 145 ISLRINPNVDAKTHPYISTGLKENKFGVDIDDVVPIYRMAHNSPYLAVKGLNCHIGSQLV 204

Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
               F   L  + +   +      +I  + LGGGI     +     +  +   + +  + 
Sbjct: 205 EVSPFLDALDKVLELVAKLDKINIRITHLDLGGGIGIKYNNEQIIDINAYIASILDKVKM 264

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIYP 283
             ++I LEPG A+V N     T V  + +N      I+D ++   +           +  
Sbjct: 265 NDLKIILEPGRAVVGNAGVFVTKVEFLKQNSDKSFAIIDGAMNDLLRPAFYQTYHQVLPV 324

Query: 284 NTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
           N           + G  C  GD   +      +  GD ++      Y     + +N    
Sbjct: 325 NENAKGVDANWDLVGPICETGDFLAKNRKLS-LSEGDYLALMSTGAYGFTMSSNYNSRPR 383

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365
               + + +         +  D +N 
Sbjct: 384 VAEVMVSGNQHTLVRERETIQDLFNK 409


>gi|71064779|ref|YP_263506.1| diaminopimelate decarboxylase [Psychrobacter arcticus 273-4]
 gi|71037764|gb|AAZ18072.1| diaminopimelate decarboxylase [Psychrobacter arcticus 273-4]
          Length = 443

 Score =  236 bits (601), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 73/385 (18%), Positives = 120/385 (31%), Gaps = 28/385 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  KQ +L           +   ++  A+K  +   +   L Q   G    S  E
Sbjct: 49  GTPCYVYSKQAILAVYQAYTDSFASLNHQICYAVKANSNLAVLGVLAQAGAGFDIVSRGE 108

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNC--DTIIFNTVSQLNKFKDKAQKLHK--K 117
           +M             ++   K         N         ++S+L    D A+ L K   
Sbjct: 109 LMRVLAAGGEASRVVFSGVGKTYSDIEYALNQSIGCFNVESISELTLINDVAKALDKSAP 168

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G   +D +            N+ G+  H   +  
Sbjct: 169 ISLRVNPDVDAKTHPYISTGLKDNKFGIAHEDALVVYQQAAKLSHINIVGIDCHIGSQLT 228

Query: 171 SFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224
               F A L  +       G    ++  I LGGG+     D       +F   L     K
Sbjct: 229 EVEPFVAALDKVIELVHSLGKVGIELRHIDLGGGLGVRYIDETPVSIDEFANALLPKLSK 288

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATI-- 281
             + ++ EPG +IV N   L T V  +         IVD+++   +   L   E A I  
Sbjct: 289 LGLTVFFEPGRSIVANAGILLTQVDVLKPTEHKNFAIVDAAMNDLIRPALYQAEMAVIPS 348

Query: 282 ------YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                     G     + G  C  GD   +      +  GD ++      Y     + +N
Sbjct: 349 ALPNNGIDTEGTQPWDIVGAICETGDFLAKDRLLS-LATGDVLAITGAGAYGFTMSSNYN 407

Query: 336 GINMPTIAVKNVDGTIKAIREFSYN 360
                +  +   D      +  S  
Sbjct: 408 SRPRASEVMVADDRHQLIRKRESIE 432


>gi|157377262|ref|YP_001475862.1| diaminopimelate decarboxylase [Shewanella sediminis HAW-EB3]
 gi|157319636|gb|ABV38734.1| diaminopimelate decarboxylase [Shewanella sediminis HAW-EB3]
          Length = 414

 Score =  236 bits (601), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 58/382 (15%), Positives = 110/382 (28%), Gaps = 23/382 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         N    +  A+K  +   + + L +   G    S  E
Sbjct: 26  GTPLYIYSRATLERHWHAFDRAVANHPHLICYAVKANSNIAVLNVLARLGSGFDIVSGGE 85

Query: 63  V-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--K 117
           +  +       +   ++   K      +  N         + ++L +    A +L K   
Sbjct: 86  LSRVIEAGGSPDKVVFSGVGKTVAEMEMALNLGIHCFNVESAAELEQLNLVAVQLGKVAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    +               V G+  H   +  
Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIAMDEAEAIFARANSLPGLEVKGVDCHIGSQLT 205

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
               F   +  +             IE   +GGG+  T  D        +   L E    
Sbjct: 206 EIQPFLDAMDRMLALIDRLAEQGINIEHFDVGGGLGVTYDDETPPQPDVYAAALLERLGG 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQE---SAT 280
             +++  EPG AI  N     T VL +   + K+  +VD ++   +   L          
Sbjct: 266 RDLKLIFEPGRAIAANAGIFVTQVLYLKGNSDKHFALVDGAMNDLIRPSLYSAWQNIIPV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                      + G  C  GD  G+      +  GD ++      Y     + +N     
Sbjct: 326 KPREGETRNYDIVGPVCETGDFLGKDREL-NLDAGDFLAVRSSGAYGFTMSSNYNSRPRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDY 362
              + +             +  
Sbjct: 385 AEIMVDGSRAHLIREREKLSQL 406


>gi|24375791|ref|NP_719834.1| diaminopimelate decarboxylase [Shewanella oneidensis MR-1]
 gi|24350739|gb|AAN57278.1|AE015863_7 diaminopimelate decarboxylase [Shewanella oneidensis MR-1]
          Length = 414

 Score =  235 bits (600), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 58/377 (15%), Positives = 107/377 (28%), Gaps = 23/377 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +   + + L +   G    S  E
Sbjct: 26  GTPLYIYSRATLERHWHAFNNAVAGHPHLVCYAVKANSNLAVLNVLARLGSGFDIVSGGE 85

Query: 63  -VMLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
              +           ++   K       A+          + ++L +    A +L K   
Sbjct: 86  LARVIEAGGDPAKVVFSGVGKTVAEMEQALNLGIYCFNVESSAELEQLNLVAGRLGKVAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    +               V G+  H   +  
Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIAMDEAEAVFARAHALPHLQVKGVDCHIGSQLT 205

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
               F   +  +             IE   +GGG+  T  D        +   L +    
Sbjct: 206 EIQPFLDAMDRMLSLIDRLAEQGIVIEHFDVGGGLGVTYDDETPPHPDVYAAALLKRLGH 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQE---SAT 280
             +++  EPG AI  N     T VL +   + K   IVD ++   +   L          
Sbjct: 266 RKLKLIFEPGRAIAANAGIFVTEVLYLKENSDKRFAIVDGAMNDLIRPALYSAWQKIIPV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              +   +   + G  C  GD  G+      +  GD +       Y     + +N     
Sbjct: 326 TPRDDQAHVFDIVGPVCETGDFLGKDREFA-IAPGDLLVVRSSGAYGFAMASNYNTRPRA 384

Query: 341 TIAVKNVDGTIKAIREF 357
              + + D         
Sbjct: 385 AEVMVDGDKAYLVRERE 401


>gi|296332270|ref|ZP_06874732.1| diaminopimelate decarboxylase [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305674971|ref|YP_003866643.1| diaminopimelate decarboxylase [Bacillus subtilis subsp. spizizenii
           str. W23]
 gi|296150584|gb|EFG91471.1| diaminopimelate decarboxylase [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305413215|gb|ADM38334.1| diaminopimelate decarboxylase [Bacillus subtilis subsp. spizizenii
           str. W23]
          Length = 439

 Score =  235 bits (600), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 66/399 (16%), Positives = 129/399 (32%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   +     +       AG   ++  A K F++  M     +        S 
Sbjct: 30  GTPLYVYDVALIRERAKSFKQAFITAGLKAQVAYASKAFSSVAMIQLAEEEGLSLDVVSG 89

Query: 61  YEVMLG-HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115
            E+       F  E   ++     ++    A+      I+ +   +++  +D  ++    
Sbjct: 90  GELYTAVAAGFPAERIHFHGNNKGREELRMALEHRIGCIVVDNFYEISLLEDLCEETGHS 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
             + LRI P V           +  S+ G            +  ++SE   + G+  H  
Sbjct: 150 IDVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQTERAIEQVLQSEHIQLLGVHCHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQI----EWISLGGGIHFTDKDYPVKDFC------- 215
            +      F    + I K+   +        + ++LGGG      +              
Sbjct: 210 SQIFDTAGFVLAAEKIFKKLDEWRESYSFVSKVLNLGGGFGIRYTEDDEPLHATEYVEKI 269

Query: 216 -QRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            + +KE + +Y   I   ++EPG ++V +  T   TV    E       V     +  ++
Sbjct: 270 IEAVKENAARYGFNIPEIWIEPGRSLVGDAGTTLYTVGSQKEVPGVRQYVAVDGGMNDNI 329

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +     A         T  + G+ C +GD+         VK GD ++      
Sbjct: 330 RPALYQAKYEAATANRIGEAHDKTVSIAGKCCESGDMLIWDIDLPEVKEGDLLAVFCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  N +N I  P +           ++  +Y D   
Sbjct: 390 YGYSMANNYNRIPRPAVVFVENGEDHLVVKRETYEDIVK 428


>gi|86148171|ref|ZP_01066469.1| diaminopimelate decarboxylase [Vibrio sp. MED222]
 gi|218710945|ref|YP_002418566.1| diaminopimelate decarboxylase [Vibrio splendidus LGP32]
 gi|85834018|gb|EAQ52178.1| diaminopimelate decarboxylase [Vibrio sp. MED222]
 gi|218323964|emb|CAV20326.1| Diaminopimelate decarboxylase [Vibrio splendidus LGP32]
          Length = 417

 Score =  235 bits (600), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 59/378 (15%), Positives = 112/378 (29%), Gaps = 24/378 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  + +            +  A+K  +  G+ +TL +   G    S  E
Sbjct: 27  GTPLYVYSRATLERHWNAFDSSVGEHPHLVCYAVKANSNLGVLNTLARLGSGFDIVSGGE 86

Query: 63  V-MLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +  +           ++   K       A+  N       +  +L +    A +L     
Sbjct: 87  LERVVAAGGDPAKVVFSGVGKTAAEMKRALELNIKCFNVESEPELERLNKVAGELGVKAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           I LRINP V  +           ++ G                    ++G+  H   +  
Sbjct: 147 ISLRINPDVDANTHPYISTGLRDNKFGIAFDRAPAVYAFAKTLDNLSIHGIDCHIGSQLT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F         +  +       I+ + +GGG+           P       L     
Sbjct: 207 DIEPFIDATDRLLALIDQLRANDINIKHLDVGGGLGVVYRDELPPQPSDYAKALLARLDN 266

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279
              +++  EPG AI  N   L T V  +         I+D+++   +   L         
Sbjct: 267 HSDLELIFEPGRAIAANAGVLLTKVEFLKPTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                    T  + G  C  GD  G+      ++ GD ++      Y     + +N  + 
Sbjct: 327 VSPRQGEAVTYDLVGPICETGDFLGKDRDLV-LEEGDLLAVRSAGAYGFAMSSNYNTRSR 385

Query: 340 PTIAVKNVDGTIKAIREF 357
               + + D T    +  
Sbjct: 386 AAEVMVDGDKTHLVRQRE 403


>gi|262393874|ref|YP_003285728.1| carboxynorspermidine decarboxylase putative [Vibrio sp. Ex25]
 gi|262337468|gb|ACY51263.1| carboxynorspermidine decarboxylase putative [Vibrio sp. Ex25]
          Length = 377

 Score =  235 bits (600), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 168/368 (45%), Positives = 242/368 (65%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPY++I++ KL+ NL+ A  ++  +GVKL+LALKCF+ WG+FD +  Y+DGTTSS  +
Sbjct: 6   LKTPYFMINEDKLIENLEKAKQLKDISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG+E FGGETHAY+V Y + ++  V   CD +IFN+ SQL  ++   +     IGLR
Sbjct: 66  EVKLGYETFGGETHAYSVGYSEDDVRDVADICDKMIFNSQSQLAAYRHIVEGKA-SIGLR 124

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP VSY+   LA+P R FSRLG +           ++G+MFH NCENK    F  +L  
Sbjct: 125 LNPGVSYAGQDLANPARQFSRLGVQADHIKPEIFDGIDGVMFHMNCENKDVDAFIGLLDA 184

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I ++FG ++ +++W+S+GGG+ FT   Y ++     LK FSEK+ VQ+YLEPGEAI+T T
Sbjct: 185 ISEQFGEYLDKLDWVSMGGGVFFTWPGYDIEKLGLALKAFSEKHGVQMYLEPGEAIITKT 244

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299
           T L  TV+DI EN+K   IVDS+ EAH  D L+Y E A+I      G +  ++   SCLA
Sbjct: 245 TDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPASILEASENGEHEYVIGSCSCLA 304

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F   +FE+P++IG R+   D AGY + + NWFNG+ MP++  +  +G I+ + EF Y
Sbjct: 305 GDQFCVANFEQPLEIGQRLHILDSAGYTMVKLNWFNGLRMPSVYCERSNGDIQKLNEFDY 364

Query: 360 NDYYNNLS 367
           +D+  +LS
Sbjct: 365 SDFKRSLS 372


>gi|293602585|ref|ZP_06685029.1| diaminopimelate decarboxylase [Achromobacter piechaudii ATCC 43553]
 gi|292819012|gb|EFF78049.1| diaminopimelate decarboxylase [Achromobacter piechaudii ATCC 43553]
          Length = 429

 Score =  235 bits (600), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 57/388 (14%), Positives = 122/388 (31%), Gaps = 26/388 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+  +  L    +T         V +   +K  +   +     +   G    S  
Sbjct: 38  LGTPLYVYSRAALKAAWETYRSAIGPLPVLVCYGMKANSNLAVLKEFVRLGAGFDIVSGG 97

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116
           E+              ++   K      DA+ +        +  +L +  D A    +  
Sbjct: 98  ELKRALAVGADPAKIVFSGVGKQVWEMRDALAAGVKCFNVESEGELRRLSDVAQEMGMRA 157

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
            + LR+NP V+             ++ G   +  +   +         + G+  H   + 
Sbjct: 158 PVSLRVNPDVNAQTHPYISTGLKENKFGIAIESALGVYLTAQALPGVEIVGVDCHIGSQL 217

Query: 170 KSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY- 225
                +   L+   ++  +      +I  + LGGG+     D         L    E+  
Sbjct: 218 TDISPYFDALEKLLDLIGQLDQAGIRIAHLDLGGGLGIRYTDETPPSPKALLDRVFERLN 277

Query: 226 -----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES- 278
                 + + LEPG ++V N   L TTV  +   + +N  IVD+++   +   L      
Sbjct: 278 ARGQGHLHLILEPGRSLVGNAGVLLTTVQYLKHADARNFAIVDAAMNDLLRPALYDAYHG 337

Query: 279 --ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                          + G  C + D   +      ++ GD ++ E    Y++   + +N 
Sbjct: 338 VQPLRPRAGDLVEYDIVGPVCESADWLAKGRALA-IQQGDVLAVESAGAYSMAMASNYNT 396

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364
                  + +        +  + +D   
Sbjct: 397 RARAAEVMVDGSNYHVVRQRETLDDLLR 424


>gi|149191481|ref|ZP_01869730.1| diaminopimelate decarboxylase [Vibrio shilonii AK1]
 gi|148834669|gb|EDL51657.1| diaminopimelate decarboxylase [Vibrio shilonii AK1]
          Length = 417

 Score =  235 bits (600), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 58/381 (15%), Positives = 108/381 (28%), Gaps = 24/381 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  + +       +    +  A+K  +  G+ +TL +   G    S  E
Sbjct: 27  GTPLYVYSRATLERHWNAFDKSVGDHPHLVCYAVKANSNIGVLNTLARLGSGFDIVSGGE 86

Query: 63  V-MLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +  +           ++   K       A+          +  +L +    A    +   
Sbjct: 87  LERVVAAGGEPSKVVFSGVGKTAQEMRRALELGIKCFNVESEPELERLNQVAGEMGVVAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           I LRINP V  +           ++ G                    V+G+  H   +  
Sbjct: 147 ISLRINPDVDANTHPYISTGLRDNKFGIAFDRAPAVYKFAQSLPNLAVHGIDCHIGSQLT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
               F         +  +       I+ + +GGG+    +D          K    +   
Sbjct: 207 DIEPFIDATDRLLALIDQLRADGVNIKHLDVGGGLGVVYRDELPPQPSDYAKALLARLEN 266

Query: 228 QI----YLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQE---SA 279
                   EPG AI  N   L T V  +         IVD+++   +   L         
Sbjct: 267 HPELELIFEPGRAIAANAGVLLTKVEFLKHTEHKNFAIVDAAMNDLMRPALYQAWQDIIP 326

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                    T  + G  C  GD  G+      ++  D ++      Y     + +N    
Sbjct: 327 VSPREGEAITYDLVGPICETGDFIGKDRSLV-LEQNDLLAVRSAGAYGFVMSSNYNTRPR 385

Query: 340 PTIAVKNVDGTIKAIREFSYN 360
               + + D      +  S  
Sbjct: 386 VAEIIVDGDKAHVVRQRESLQ 406


>gi|269967062|ref|ZP_06181130.1| carboxynorspermidine decarboxylase [Vibrio alginolyticus 40B]
 gi|269828321|gb|EEZ82587.1| carboxynorspermidine decarboxylase [Vibrio alginolyticus 40B]
          Length = 377

 Score =  235 bits (599), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 168/368 (45%), Positives = 241/368 (65%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPY++I++ KL+ NL+ A  ++  +GVKL+LALKCF+ WG+FD +  Y+DGTTSS  +
Sbjct: 6   LKTPYFMINEDKLIENLEKAKQLKDISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG+E FGGETHAY+V Y + ++  V   CD +IFN+ SQL  ++   +     IGLR
Sbjct: 66  EVKLGYETFGGETHAYSVGYSEDDVRDVADICDKMIFNSQSQLAAYRHIVEGKA-SIGLR 124

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP VSY+   LA+P R FSRLG +           ++G+MFH NCENK    F  +L  
Sbjct: 125 LNPGVSYAGQDLANPARQFSRLGVQADHIKPEIFDGIDGVMFHMNCENKDVDAFIGLLDA 184

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I  +FG ++ +++W+S+GGG+ FT   Y ++     LK FSEK+ VQ+YLEPGEAI+T T
Sbjct: 185 ISAQFGEYLDKLDWVSMGGGVFFTWPGYDIEKLGLALKAFSEKHGVQMYLEPGEAIITKT 244

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299
           T L  TV+DI EN+K   IVDS+ EAH  D L+Y E A+I      G +  ++   SCLA
Sbjct: 245 TDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPASILEASENGEHEYVIGSCSCLA 304

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F   +FE+P++IG R+   D AGY + + NWFNG+ MP++  +  +G I+ + EF Y
Sbjct: 305 GDQFCVANFEQPLEIGQRLHILDSAGYTMVKLNWFNGLRMPSVYCERSNGDIQKLNEFDY 364

Query: 360 NDYYNNLS 367
           +D+  +LS
Sbjct: 365 SDFKRSLS 372


>gi|281425169|ref|ZP_06256082.1| carboxynorspermidine decarboxylase [Prevotella oris F0302]
 gi|281400635|gb|EFB31466.1| carboxynorspermidine decarboxylase [Prevotella oris F0302]
          Length = 388

 Score =  235 bits (599), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 112/374 (29%), Positives = 191/374 (51%), Gaps = 13/374 (3%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y++++ +L  NL+    + + A V+++LA K +A W  F    +Y+  TT+SSL E  
Sbjct: 15  PIYILEEARLRRNLNLIANVAREADVEIILAFKAYALWKTFPIFREYIHATTASSLSEAR 74

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ--KLHKKIGLRI 122
           L  E+FG + H ++ AY D EID +      + FN+++Q  ++ ++ +        GLR+
Sbjct: 75  LALEEFGSKAHTFSPAYTDDEIDEIARCSSHLQFNSLTQYARYHERVRKVNPTISYGLRV 134

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           NP  S     L +P  P +R G       E    ++ G   H +CE+     F   LK+I
Sbjct: 135 NPEYSEVGTDLYNPCAPGTRFGISADKMPEMLPDDIEGFHCHCHCESG-ADVFERTLKHI 193

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNT 241
           E +F  + +Q++WI+ GGG   T  DY        L++F  +Y   ++ LEPG A    T
Sbjct: 194 ENKFSRWFSQLKWINFGGGHLMTRHDYDTLLLVDTLQKFHMRYPWLKVILEPGSAFAWQT 253

Query: 242 TTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT--------GPYTAMV 292
             L + V+D+ E+      + + S   H+PD L    +  +  +          PY   +
Sbjct: 254 GPLVSQVVDVVEDHGIKTAILNVSFTCHMPDCLEMPYNPVVRGSEYIEADDKSSPYIYRL 313

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352
            G SCL+GD  G + F+  +++G+ + FED+  Y   + N FNGI+ P I +  +DGT++
Sbjct: 314 GGNSCLSGDFMGYWKFDHALQVGENVIFEDMLHYTTVKTNMFNGISHPAIGLAKLDGTLE 373

Query: 353 AIREFSYNDYYNNL 366
            +R++ Y DY + +
Sbjct: 374 VLRKYGYEDYRDRM 387


>gi|255321868|ref|ZP_05363018.1| diaminopimelate decarboxylase [Campylobacter showae RM3277]
 gi|255300972|gb|EET80239.1| diaminopimelate decarboxylase [Campylobacter showae RM3277]
          Length = 413

 Score =  235 bits (599), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 65/396 (16%), Positives = 117/396 (29%), Gaps = 34/396 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D   + +  +            +  A+K  +   +   L     G    S+ E
Sbjct: 11  GTPLYVYDFDYIAHRYEALKNAFHARKSLVCYAVKANSNLSVLKFLAGLGAGFDCVSVGE 70

Query: 63  VMLGHEKFGGE--THAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIG 119
           V                 V  +D E+   L N    I   + +++N+ +  A++L K   
Sbjct: 71  VKRALLAGAKNYQIILSGVGKRDDELKFALENEILMINLESEAEMNRLEAIAKQLGKSAR 130

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENK 170
           +  R+NP +              ++ G   +           S      G+  H   +  
Sbjct: 131 ISIRVNPDIDAKTHPYISTGLNENKFGVDLQTAKKMYLHAKNSPHLEPVGIHSHIGSQIT 190

Query: 171 SFLCFSAMLKNIEKEFGHFI---TQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                    K +             I++  +GGGI     +     + ++ Q +      
Sbjct: 191 DIKPVIEAAKIVANLTRELKATQIDIKFFDVGGGIGIVYGEESEPDLYEYAQGILANLSG 250

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             V +  EPG  IV N     T+VL       K  VIVD ++   +   L   +      
Sbjct: 251 LDVTVVCEPGRFIVGNAGYFLTSVLYEKFNKEKRFVIVDGAMNDLIRPSLYQAKHKIFAL 310

Query: 284 NTGP---------------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
           ++G                    V G  C +GD   +     P+  GD +  +    Y  
Sbjct: 311 SSGKTLCECKKEQLWELKFSPCDVVGPICESGDFLAKDRNLPPLNPGDLVVIKSAGAYGF 370

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              + +N                   R  S+ D   
Sbjct: 371 AMSSNYNTRGRAAEVAVKGGEDFLVRRRESFEDVVA 406


>gi|225076892|ref|ZP_03720091.1| hypothetical protein NEIFLAOT_01943 [Neisseria flavescens
           NRL30031/H210]
 gi|224951778|gb|EEG32987.1| hypothetical protein NEIFLAOT_01943 [Neisseria flavescens
           NRL30031/H210]
          Length = 406

 Score =  235 bits (599), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 63/385 (16%), Positives = 126/385 (32%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L    +            +  A+K      +         G    S  E
Sbjct: 18  GTPLYVYSQSALTEAFEHYQTAFATLNPLVCYAVKANGNLSIIKYFASLGSGFDIVSGGE 77

Query: 63  VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G   +T    V   + EI+ A+ +        ++ ++++ +  A++L     
Sbjct: 78  LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAERLGKTAS 137

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D +E+           + G+  H   +  
Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIVGIDCHIGSQLT 197

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                    + I             +E + LGGG+    +D     +  + + +++    
Sbjct: 198 DLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDENVPDLGAYARAVQKLIGT 257

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++ LEPG ++V N   L T V  +     KN V+VD+++   +   L          
Sbjct: 258 RRLKLILEPGRSLVGNAGALLTRVEFVKHGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317

Query: 284 NTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
            T      TA + G  C  GD  G+       + GD +       Y  +  + +N  N  
Sbjct: 318 ETKDIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGSSMASNYNTRNRA 376

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + +        +  +      N
Sbjct: 377 AEVLVDGSECKLIRQRETVEQQMAN 401


>gi|118591377|ref|ZP_01548775.1| diaminopimelate decarboxylase [Stappia aggregata IAM 12614]
 gi|118436049|gb|EAV42692.1| diaminopimelate decarboxylase [Stappia aggregata IAM 12614]
          Length = 424

 Score =  235 bits (599), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 64/388 (16%), Positives = 114/388 (29%), Gaps = 26/388 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +         +    +  A+K  +   +  TL Q   G    S  
Sbjct: 25  VGTPFYCYSTATLTRHYQVFAAAFSDIPSLVCYAMKANSNQAVLKTLAQLGAGMDVVSEG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118
           E+              ++   K     A     D       +  +L +    A ++ K  
Sbjct: 85  ELRRARAAGVPASKIVFSGVGKTEAEQAYALQEDILCFNVESEPELRQLSRVASEMGKTA 144

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCEN 169
              +RINP V           +  ++ G           +        V G+  H   + 
Sbjct: 145 RVSMRINPDVDAKTHAKIATGKAENKFGIPWQRARDVYAEAAALPGIKVTGIDMHIGSQI 204

Query: 170 KSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221
                F        ++  +       I+ + LGGG+                + Q +K+ 
Sbjct: 205 TELEPFDNAFARLGDLIADLRSQGHTIDHVDLGGGLGIPYITDNNPPPHPDAYAQVVKKH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
             +    +  EPG  I  N   L T V+ + +   K  VIVD+++   +   L       
Sbjct: 265 VRELDCMVMFEPGRMIAGNAGILVTEVIYVKDGADKKFVIVDAAMNDLIRPTLYEAYHEV 324

Query: 281 IYPNTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                         A + G  C  GD   +      VK G+ ++      Y   +   +N
Sbjct: 325 RPVREPAEETDRIKADIVGPVCETGDFLAQNRDMPSVKAGEMLAVYSAGAYGAVQSCTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY 363
              +    + N D         SY D  
Sbjct: 385 TRLLVPEVLVNADQFAVIRPRTSYEDLL 412


>gi|149192298|ref|ZP_01870508.1| carboxynorspermidine decarboxylase [Vibrio shilonii AK1]
 gi|148833867|gb|EDL50894.1| carboxynorspermidine decarboxylase [Vibrio shilonii AK1]
          Length = 377

 Score =  235 bits (599), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 164/368 (44%), Positives = 242/368 (65%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPY++I++ KL+ NL+ A ++++ +GVKL+LALKCF+ WG+FD +  Y+DG+TSS  +
Sbjct: 6   LKTPYFMINEDKLVENLEKAKHLKEVSGVKLVLALKCFSTWGVFDIIKPYLDGSTSSGPF 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG+E FGGETHAY+V Y + ++  V   CD +IFN+ SQL  ++   +     IGLR
Sbjct: 66  EVKLGYETFGGETHAYSVGYTEDDVREVADICDKMIFNSQSQLAAYRHIVEGKTS-IGLR 124

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP VSY+   LA+P RP+SRLG +      +   +++G+MFH NCENK    F  +L  
Sbjct: 125 LNPGVSYAGQDLANPARPYSRLGVQADHIDPTIFDSIDGVMFHMNCENKDVDAFIGLLDA 184

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I + FG  + +++W+S+GGG+ FT   Y +      L  FS+K+ VQ+YLEPGEAI+T T
Sbjct: 185 ISERFGTHLDKLDWVSMGGGVFFTWPGYDIDKLGAALSAFSKKHGVQLYLEPGEAIITKT 244

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY--PNTGPYTAMVCGRSCLA 299
           T L  TV+DI EN K   IV+S+ EAH  D L+Y E A+I    + G +  ++   SCLA
Sbjct: 245 TDLVVTVVDIVENEKKTAIVNSATEAHRLDTLIYDEPASILEANSEGDHEYVIGSCSCLA 304

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F E  F++P+++G R+   D AGY + + NWFNG+ MP+I  +   G I+ + EF Y
Sbjct: 305 GDQFCEAKFDEPLEVGQRLHIMDSAGYTMVKLNWFNGLKMPSIYCERSSGQIEKLNEFGY 364

Query: 360 NDYYNNLS 367
           +D+  +LS
Sbjct: 365 DDFKCSLS 372


>gi|82523967|emb|CAI78778.1| diaminopimelate decarboxylase [uncultured epsilon proteobacterium]
          Length = 403

 Score =  235 bits (599), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 54/384 (14%), Positives = 116/384 (30%), Gaps = 22/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP Y+ D   +    +      K     +  A+K  +   +         G    S+ E
Sbjct: 12  KTPLYVYDLDYMSAQYNELKAAFKGRKSIMAYAVKANSNLSVVKHFADLGSGADCVSIGE 71

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
           V              ++   K  +        D   I   + ++L + +  A++L+    
Sbjct: 72  VRRAFLAGIPSYKIIFSGVGKSDDEIREAIEKDILYINVESEAELGRVELIAKELNCTCR 131

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           +  R+NP++              ++ G          I        +  G+ FH   +  
Sbjct: 132 ISIRVNPNIDPKTHPYISTGLHDNKFGVDLSSAKRMYIFAKNSENLDPVGIHFHIGSQLT 191

Query: 171 SFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                    + +    +   +   ++++  +GGG+     D       D+ Q +    + 
Sbjct: 192 QLKPIYESAEIVADLVRSLQNIKIELKFFDIGGGLGVKYDDEVTINPYDYAQAILGTLKG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES---AT 280
             + +  EPG  +  N     T VL       K  V+VD ++   +   L        A 
Sbjct: 252 LDLTVVCEPGRFLTANAGYFLTKVLYEKQNGDKKFVVVDGAMNDLLRPALYGAYHKIEAI 311

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
               +      + G  C +GD F + +    ++  D +       Y     + +N     
Sbjct: 312 TDNASEMQKVDIVGPVCESGDFFAKDYMLPKLEHNDLLVIHSAGSYGFGMGSNYNTRGRS 371

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
                         +  +++D   
Sbjct: 372 AEVALKNGTAKVIRKRETFDDLVA 395


>gi|119469651|ref|ZP_01612520.1| putative diaminopimelate decarboxylase [Alteromonadales bacterium
           TW-7]
 gi|119446898|gb|EAW28169.1| putative diaminopimelate decarboxylase [Alteromonadales bacterium
           TW-7]
          Length = 417

 Score =  235 bits (599), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 60/387 (15%), Positives = 117/387 (30%), Gaps = 26/387 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +     +        KN    +  A+K  +   + + L +   G    S  E
Sbjct: 26  GTPCYVYSRATFERHYLAFANATKNHKSLVCYAVKANSNIAVLNILARLGSGFDIVSKGE 85

Query: 63  -VMLGHEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLH--KK 117
              +           ++   K  +  A             + S+L +  + A +L+    
Sbjct: 86  LARVIKAGGDAGKVVFSGVAKTADEIAYALKLGIKCFNVESASELERISEVACELNLVAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCENK 170
           I +R+NP +              ++ G          +        NV G+  H   +  
Sbjct: 146 ISIRVNPDIDAKTHPYISTGLKENKFGIDIQTAVSVYQQAAALPGLNVIGVDCHIGSQLT 205

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
               F   L     +  E      ++  + +GGG+     +       +  ++ + +   
Sbjct: 206 EVKPFLEALDKLLALIDELKSVGIELSHLDIGGGLGVPYDNEQPPHPSEYAEQVTARLEN 265

Query: 228 QIYL----EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +L    EPG AI  N   L T V  I +N      +  +    +    LYQ    I P
Sbjct: 266 YRHLELIFEPGRAIAANAGVLITQVEFIKQNQSKFFAIVDAGMNDMLRPSLYQAWQKIIP 325

Query: 284 NT------GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
            +        +   + G  C  GD  G+      +K GD ++      Y     + +N  
Sbjct: 326 VSVRDDDTPTHNFDIVGPVCETGDFLGKDRELA-LKQGDLLAQRSAGAYGFTMSSNYNSR 384

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
                 + + +         +    Y 
Sbjct: 385 PRVAEIMVDGEQHHLIRERETIESLYQ 411


>gi|310815091|ref|YP_003963055.1| diaminopimelate decarboxylase [Ketogulonicigenium vulgare Y25]
 gi|308753826|gb|ADO41755.1| diaminopimelate decarboxylase [Ketogulonicigenium vulgare Y25]
          Length = 419

 Score =  235 bits (599), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 64/388 (16%), Positives = 118/388 (30%), Gaps = 24/388 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+     L  +              +  A+K  +   +  TL     G    S+ 
Sbjct: 25  VGTPVYIYSTATLKRHFQLFDDALAGMPHLVCFAVKANSNVAVLKTLGDLGAGMDVVSVG 84

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HK 116
           E +        GE   ++   K  E                +  +L    D A +L    
Sbjct: 85  EYLRAKAAGVPGERIVFSGIGKTREEIRTTLLGGIRQFNVESEPELQAISDIASELGLIA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCEN 169
            + +R+NP V           +  ++ G                    V G+  H   + 
Sbjct: 145 PVAVRVNPDVDAHTHAKIATGKSENKFGIPISRAQAVYAFAASLPGIQVVGIDVHIGSQL 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221
                F A  + + +           I  + LGGG+    +          ++   ++E 
Sbjct: 205 TDLAPFRAAYQKVAELTEVLRAEGHTISRLDLGGGLGIPYRRDNSAPPLPSEYGAMVRET 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                V+I +EPG  I  N   L + V+ + E   +  +IVD+++   +   +       
Sbjct: 265 LGHLDVEIEIEPGRLIAGNAGLLVSRVIYVKEGEDRRFLIVDAAMNDLIRPAMYEAHHDI 324

Query: 281 IYPNTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
           I  +          V G  C  GD F       P+  G+ ++F     Y     + +N  
Sbjct: 325 IPVDESLAPSTVYDVVGPVCETGDTFARGRAMAPLNAGELVAFRSAGAYGAVMASEYNSR 384

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            +    + N D         SY +    
Sbjct: 385 PLVPEVLVNGDQFAVIRPRPSYEEMIAR 412


>gi|258625070|ref|ZP_05719989.1| diaminopimelate decarboxylase [Vibrio mimicus VM603]
 gi|258582621|gb|EEW07451.1| diaminopimelate decarboxylase [Vibrio mimicus VM603]
          Length = 449

 Score =  235 bits (599), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 57/380 (15%), Positives = 111/380 (29%), Gaps = 24/380 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  +  G+ +TL +   G    S+ E
Sbjct: 49  GTPLYVYSRATLERHWHAFDKSVGDYPHLICYAVKANSNLGVLNTLARLGSGFDIVSVGE 108

Query: 63  VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++   K       A+          +  +L++    A +L     
Sbjct: 109 LERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKIKCFNVESERELHRLNKVAAELGVKAP 168

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LRINP V              ++ G       E           +V+G+  H   +  
Sbjct: 169 ISLRINPDVDAKTHPYISTGLRDNKFGITFDRAAEVYRLAHSLSNLDVHGIDCHIGSQLT 228

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
           +   F         +          I  + +GGG+    +D       +  K   ++   
Sbjct: 229 ALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGGLGVVYRDELPPQPSEYAKALLDRLER 288

Query: 228 QI----YLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQE---SA 279
                   EPG AI  N   L T V  +         I+D+++   +   L         
Sbjct: 289 HRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHKNFAIIDAAMNDLIRPALYQAWQDIIP 348

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                    T  + G  C   D  G+      ++ GD ++      Y     + +N    
Sbjct: 349 LRPRQGEAQTYDLVGPVCETSDFLGKDRDLV-LEEGDLLAVRSSGAYGFTMSSNYNSRPR 407

Query: 340 PTIAVKNVDGTIKAIREFSY 359
               + + +      +  + 
Sbjct: 408 VAEVMVDGNKAHLVRQRETL 427


>gi|260768269|ref|ZP_05877203.1| carboxynorspermidine decarboxylase putative [Vibrio furnissii CIP
           102972]
 gi|260616299|gb|EEX41484.1| carboxynorspermidine decarboxylase putative [Vibrio furnissii CIP
           102972]
          Length = 411

 Score =  235 bits (599), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 165/368 (44%), Positives = 243/368 (66%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPY++ID+ KL+ NL+ A  ++  +GVKL+LALKCF+ WG+FD +  Y+DGTTSS  +
Sbjct: 40  LKTPYFMIDEGKLIANLEIAKRLKDISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPF 99

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LGH+ FGGETHAY+V Y + ++  V   CD +IFN+ SQL+ ++   +     +GLR
Sbjct: 100 EVKLGHDTFGGETHAYSVGYSEDDVKEVADICDKMIFNSQSQLSAYRHLVEGKA-SLGLR 158

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP VSY+   LA+P R FSRLG +      +  + +NG+MFH NCENK    F  +L +
Sbjct: 159 LNPGVSYAGQDLANPARQFSRLGVQADHIDPAVFETINGVMFHMNCENKDVDAFINLLDS 218

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I + FG ++  ++W+SLGGG+ FT   Y V+     LK F+EK+ VQ+YLEPGEA++T T
Sbjct: 219 ISERFGAYLNTLDWVSLGGGVFFTWPGYDVEKLGLALKAFAEKHGVQLYLEPGEAVITKT 278

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299
           T L  TV+DI EN     IVDS+ EAH  D L+Y+E A++     +G +  ++   SCLA
Sbjct: 279 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASESGEHEYVIGSCSCLA 338

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F    F++P+K+G ++   D AGY + + NWFNG+ MP++  +  +G I+ + EF Y
Sbjct: 339 GDQFCVAKFDEPLKVGQKLHILDSAGYTMVKLNWFNGLKMPSVYCERTNGDIQKLNEFGY 398

Query: 360 NDYYNNLS 367
           +D+  +LS
Sbjct: 399 DDFKRSLS 406


>gi|37678270|ref|NP_932879.1| diaminopimelate decarboxylase [Vibrio vulnificus YJ016]
 gi|37197009|dbj|BAC92850.1| diaminopimelate decarboxylase [Vibrio vulnificus YJ016]
          Length = 417

 Score =  235 bits (599), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 57/378 (15%), Positives = 106/378 (28%), Gaps = 24/378 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +        +     +  A+K  +  G+ +TL +   G    S  E
Sbjct: 27  GTPLYVYSRATLERHWHAFDRSVEGHPHLVCYAVKANSNLGVLNTLARLGSGFDIVSGGE 86

Query: 63  VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++   K       A+  N       +  +L +    A +L     
Sbjct: 87  LERVLAAGGDPRKVVFSGVGKTEAEMRRALELNIKCFNVESEPELERLNRVAGELGVKAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           I LRINP V              ++ G                   NV G+  H   +  
Sbjct: 147 ISLRINPDVDAQTHPYISTGLRDNKFGIAFDRAPAVYQFAQSLANLNVQGIDCHIGSQLT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
           +   F         +  +       I  + +GGG+    ++       +  K    +   
Sbjct: 207 AIEPFIDATDRLLALIDDLKEQGINIRHLDVGGGLGVVYRNELPPQPSEYAKALLGRLEN 266

Query: 228 Q----IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279
                +  EPG AI  N   L T V  +         I+D+++   +   L         
Sbjct: 267 HQDLELIFEPGRAIAANAGVLLTKVEFLKHTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                    T  + G  C  GD  G+      +   D ++      Y     + +N    
Sbjct: 327 VQPRQGEAVTYDLVGPICETGDFLGKDRSLV-LAENDLLAVRSAGAYGFVMSSNYNTRAR 385

Query: 340 PTIAVKNVDGTIKAIREF 357
               + +        +  
Sbjct: 386 AAEVMVDGKQHYLVRQRE 403


>gi|315179977|gb|ADT86891.1| Diaminopimelate decarboxylase [Vibrio furnissii NCTC 11218]
          Length = 411

 Score =  235 bits (599), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 165/368 (44%), Positives = 243/368 (66%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPY++ID+ KL+ NL+ A  ++  +GVKL+LALKCF+ WG+FD +  Y+DGTTSS  +
Sbjct: 40  LKTPYFMIDEGKLIANLEIAKRLKDISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPF 99

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LGH+ FGGETHAY+V Y + ++  V   CD +IFN+ SQL+ ++   +     +GLR
Sbjct: 100 EVKLGHDTFGGETHAYSVGYSEDDVKEVADICDKMIFNSQSQLSAYRHLVEGKA-SLGLR 158

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP VSY+   LA+P R FSRLG +      +  + +NG+MFH NCENK    F  +L +
Sbjct: 159 LNPGVSYAGQDLANPARQFSRLGVQADHIDPAVFETINGVMFHMNCENKDVDAFINLLDS 218

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I + FG ++  ++W+SLGGG+ FT   Y V+     LK F+EK+ VQ+YLEPGEA++T T
Sbjct: 219 ISERFGAYLNTLDWVSLGGGVFFTWPGYDVEKLGFALKAFAEKHGVQLYLEPGEAVITKT 278

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299
           T L  TV+DI EN     IVDS+ EAH  D L+Y+E A++     +G +  ++   SCLA
Sbjct: 279 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASESGEHEYVIGSCSCLA 338

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F    F++P+K+G ++   D AGY + + NWFNG+ MP++  +  +G I+ + EF Y
Sbjct: 339 GDQFCVAKFDEPLKVGQKLHILDSAGYTMVKLNWFNGLKMPSVYCERTNGDIQKLNEFGY 398

Query: 360 NDYYNNLS 367
           +D+  +LS
Sbjct: 399 DDFKRSLS 406


>gi|304316110|ref|YP_003851255.1| diaminopimelate decarboxylase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302777612|gb|ADL68171.1| diaminopimelate decarboxylase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 445

 Score =  235 bits (599), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 74/400 (18%), Positives = 135/400 (33%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ID+++L  N  +     K    G +++ A K F    +   + +   G    S 
Sbjct: 29  GTPLYVIDEEQLRENCRSFYNGFKRNYPGNEVIYASKAFMTTAICKIIEEENLGLDVVSG 88

Query: 61  YEVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+       F  +   ++   K  D    A+  N   II +   +LN   + A K+   
Sbjct: 89  GELYTALKADFPVKNIYFHGNNKSADELTMALEYNIGCIIVDNWFELNMLNELAFKMGKK 148

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I LR++P V           +  S+ G         +  K  +  +  N+ GL  H  
Sbjct: 149 PNIYLRVSPGVEAHTHEYIKTGQIDSKFGFPLFNGDALDAIKYALTLDNVNLTGLHCHIG 208

Query: 167 CENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            +  S+  + A +  +             ++  + LGGG      +       + +    
Sbjct: 209 SQIFSYDSYKAEIDIMMNFLKKVKDHTGWEVGELDLGGGFGIAYVEEDDPQPIELIANEI 268

Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            K               I +EPG +I+ N  T   TV  I         V     +  ++
Sbjct: 269 MKSVEEYSRNLNIKMPHIIVEPGRSIIGNAGTTLYTVGAIKNIPGVRKYVSVDGGMADNI 328

Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   I  N           + G+ C +GD+         ++ GD I+      
Sbjct: 329 RTALYGAKYNAIVANKARKINLEKVSIAGKCCESGDMLIWDIELPQLESGDIIAVTCTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           YN +  + +N +  P   + N   +   +   +Y D   N
Sbjct: 389 YNYSMASNYNRLPRPAAVLVNNGESDLIVARETYEDLVRN 428


>gi|254804203|ref|YP_003082424.1| Diaminopimelate decarboxylase [Neisseria meningitidis alpha14]
 gi|254667745|emb|CBA03656.1| Diaminopimelate decarboxylase [Neisseria meningitidis alpha14]
          Length = 406

 Score =  235 bits (599), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 63/385 (16%), Positives = 125/385 (32%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L    +            +  A+K      +         G    S  E
Sbjct: 18  GTPLYVYSQSALTEAFEHYQTAFAALNPLVCYAVKANGNLSIIKHFASLGSGFDIVSGGE 77

Query: 63  VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G   +T    V   + EI+ A+ +        ++ ++++ +  A +L     
Sbjct: 78  LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAS 137

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D +E+           + G+  H   +  
Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLT 197

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                    + I             +E + LGGG+    ++     +  + Q +++    
Sbjct: 198 DLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQNEKVPDLGAYAQAVQKLIGT 257

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++ LEPG ++V N   L T V  +     KN V+VD+++   +   L          
Sbjct: 258 RRLKLILEPGRSLVGNAGALLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317

Query: 284 NTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
            T      TA + G  C  GD  G+       + GD +       Y  +  + +N  N  
Sbjct: 318 ETKDIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGASMASNYNARNRA 376

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + + +         +      N
Sbjct: 377 AEVLVDGNEYRLIRLRETLEQQMAN 401


>gi|156975017|ref|YP_001445924.1| hypothetical protein VIBHAR_02739 [Vibrio harveyi ATCC BAA-1116]
 gi|156526611|gb|ABU71697.1| hypothetical protein VIBHAR_02739 [Vibrio harveyi ATCC BAA-1116]
          Length = 377

 Score =  235 bits (599), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 168/368 (45%), Positives = 241/368 (65%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPY++I++ KL+ NL+ A  ++  +GVKL+LALKCF+ WG+FD +  Y+DGTTSS  +
Sbjct: 6   LKTPYFMINEDKLVENLEKAKQLKDISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG+E FGGETHAY+V Y + ++  V   CD +IFN+ SQL  ++   +     IGLR
Sbjct: 66  EVKLGYETFGGETHAYSVGYSEDDVREVADICDKMIFNSQSQLAAYRHIVEGKA-SIGLR 124

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP VSY+   LA+P R FSRLG +           ++G+MFH NCENK    F  +L +
Sbjct: 125 LNPGVSYAGQDLANPARQFSRLGVQADHIKPEIFDGIDGVMFHMNCENKDVDAFIGLLDS 184

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I ++FG ++ +++W+S+GGG+ FT   Y  +     LK FSEK+ VQ+YLEPGEAI+T T
Sbjct: 185 ISEQFGEYLNKLDWVSMGGGVFFTWPGYDTEKLGLALKAFSEKHGVQMYLEPGEAIITKT 244

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299
           T L  TV+DI EN+K   IVDS+ EAH  D L+Y E A+I      G +  ++   SCLA
Sbjct: 245 TDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPASILEASENGEHEYVIGSCSCLA 304

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F   +FE+P++IG R+   D AGY + + NWFNG+ MP++  +   G I+ + EF Y
Sbjct: 305 GDQFCVANFEQPLEIGQRLHILDSAGYTMVKLNWFNGLRMPSVYCERSSGEIQKLNEFDY 364

Query: 360 NDYYNNLS 367
           +D+  +LS
Sbjct: 365 SDFKRSLS 372


>gi|225175576|ref|ZP_03729570.1| diaminopimelate decarboxylase [Dethiobacter alkaliphilus AHT 1]
 gi|225168905|gb|EEG77705.1| diaminopimelate decarboxylase [Dethiobacter alkaliphilus AHT 1]
          Length = 446

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 62/400 (15%), Positives = 123/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++D++++  N        K      ++  A K F    M   ++         S 
Sbjct: 30  GTPLYVMDEEQIRKNCAEYRDTFKEHYPNSQVAYAGKAFLTKAMCRLVDDEGLALDVVSG 89

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E   Y+   K  E   +   +     + ++ S+L      A +  K 
Sbjct: 90  GEIHTALAAGFPAEKMLYHGNNKTPEEIEMALENGVGRFVVDSYSELELLNALAGEAGKV 149

Query: 118 IGL--RINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
            GL  RI P V           +  S+ G    D           + +   + GL  H  
Sbjct: 150 AGLYLRIKPGVEAHTHHYIQTGQVDSKFGMGLADGEAMTAVKMAAKMKHVELKGLHCHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKD--------F 214
            +      F      +         +    I  + LGGG                     
Sbjct: 210 SQIFDLKPFQMAAAVMVDFMQEIKKKTGTVIGELDLGGGFGIRYTREDSPYSLSGFVELI 269

Query: 215 CQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            + +K+   +++  +    +EPG +I+        TV  + E       V     +  ++
Sbjct: 270 AKTVKDKCAEHNYPLPKLLVEPGRSIIGEAGITLYTVGSVKEIPGVRKYVAVDGGMMDNL 329

Query: 270 PDYLLYQESATI----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              +   +   +      +       + G++C +GD+         ++ GD ++      
Sbjct: 330 RPAMYEAKYEAVVANRMNDQAEEKVSIAGKACESGDMLIWDIELPKLQRGDLMAVLSTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y+ +  N +N    P +           +   SY+D   N
Sbjct: 390 YHYSMANNYNRFPRPPVVFVKDGQADLVVARESYDDLVQN 429


>gi|145632076|ref|ZP_01787811.1| diaminopimelate decarboxylase [Haemophilus influenzae 3655]
 gi|144986983|gb|EDJ93513.1| diaminopimelate decarboxylase [Haemophilus influenzae 3655]
          Length = 415

 Score =  235 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 60/384 (15%), Positives = 115/384 (29%), Gaps = 25/384 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +  G+ + + +   G    S  E
Sbjct: 26  GTPLYVYSRATLERHWHAFDSAFGKRPHLICFAVKSCSNIGVLNIMAKLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +              ++     ++  + A+          +VS+L      A        
Sbjct: 86  LERVLAAGGDASKVVFSGVAKSREEIMRALEVGIRCFNVESVSELKHINQIAGEMGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G    +  E            + G+  H   +  
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVDEAREVYKLASTLPNIKITGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F         + ++       ++ + LGGG+  T       +P       L++   
Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGLGVTYTDETPPHPSDYANALLEKLKN 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
              ++I LEPG AI  N   L   V  +     +N  I D+ +   +   L       I 
Sbjct: 266 YPELEIILEPGRAISANAGILVAKVQYLKSNESRNFAITDTGMNDMIRPALYEAYMNIIE 325

Query: 283 PNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +           V G  C   D  G+      +  GD I+      Y  +  + +N   
Sbjct: 326 IDRTLEREKAIYDVVGPVCETSDFLGKQRELS-IAEGDYIAQCSAGAYGASMSSNYNSRA 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362
                + + D +    R  +  + 
Sbjct: 385 RTAEVLVDGDQSYLIRRRETLQEL 408


>gi|159795662|pdb|2YXX|A Chain A, Crystal Structure Analysis Of Diaminopimelate
           Decarboxylate (Lysa)
          Length = 386

 Score =  235 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 62/374 (16%), Positives = 115/374 (30%), Gaps = 15/374 (4%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  ++ L         + +   +    A+K      +   L +   G    +  E
Sbjct: 12  GTPTYVYFEETLRKRSRLVKEVFEGVNLLPTFAVKANNNPVLLKILREEGFGXDVVTKGE 71

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIG 119
           ++          T  +N   K  +        D   +  ++  +      +      +  
Sbjct: 72  LLAAKLAGVPSHTVVWNGNGKSRDQXEHFLREDVRIVNVDSFEEXE-IWRELNPEGVEYF 130

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVNGLMFHNNCENKSFLCF 175
           +R+NP V               + G   +D      +    N+ GL  H   +      F
Sbjct: 131 IRVNPEVDAKTHPHISTGLKKHKFGIPLEDLDSFXERFRSXNIRGLHVHIGSQITRVEPF 190

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-KYSVQIYLEPG 234
                 + +    +    E I++GGG         +     R K   + K   ++ +E G
Sbjct: 191 VEAFSKVVRASERYG--FEEINIGGGWGINYSGEELDLSSYREKVVPDLKRFKRVIVEIG 248

Query: 235 EAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLL--YQESATIYPNTGPYTAM 291
             IV  +  L   V+ +        V+VD      +   L   Y     +        A 
Sbjct: 249 RYIVAPSGYLLLRVVLVKRRHNKAFVVVDGGXNVLIRPALYSAYHRIFVLGKQGKEXRAD 308

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
           V G  C +GD+         V+ GD I+ E+   Y     N +N    P   +   +G I
Sbjct: 309 VVGPLCESGDVIAYDRELPEVEPGDIIAVENAGAYGYTXSNNYNSTTRPAEVLVRENGRI 368

Query: 352 -KAIREFSYNDYYN 364
               R  +  D + 
Sbjct: 369 SLIRRRETEXDIFK 382


>gi|297545173|ref|YP_003677475.1| diaminopimelate decarboxylase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296842948|gb|ADH61464.1| diaminopimelate decarboxylase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 445

 Score =  235 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 71/400 (17%), Positives = 134/400 (33%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ID++ L  N        K    G +++ A K F    +   + +   G    S 
Sbjct: 29  GTPLYVIDEELLRQNCRAFYNGFKKDYPGNEVIYASKAFMTMAICKIIEEEKLGLDVVSG 88

Query: 61  YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH-- 115
            E+       F  E   ++     ++  I A+ +N   II +   +LN   D A+K++  
Sbjct: 89  GELYTALKAGFPPEKIYFHGNNKSREELIMALENNIGRIIVDNWYELNMLNDLAKKMNKV 148

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
             I +RI+P V           +  S+ G            +  +  E  N+ GL  H  
Sbjct: 149 PNIYIRISPGVEAHTHQYVKTGQIDSKFGFPLFNGDAIKAIEYALTLENVNLVGLHSHIG 208

Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            +      + A +  +             ++  + LGGG      +       +++    
Sbjct: 209 SQIFDAESYKAEIDIMMNFLKLLKEFLGWEVGELDLGGGFGIAYVEEDDPQPIEQIASEI 268

Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            +               I +EPG +I+ N  T   TV  I +       V     +  ++
Sbjct: 269 MQAVKEYSVALNIKMPNIIVEPGRSIIGNAGTTLYTVGAIKDIPGVRKYVAVDGGMSDNI 328

Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   I  N           + G+ C +GD+         ++ GD ++      
Sbjct: 329 RTALYGAKYDAIVANKAKNIKSEKVSIAGKLCESGDMLIWDITLPKIEEGDILAVTCTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           YN +  + +N +  P   +         +   +Y D   N
Sbjct: 389 YNYSMASNYNRLPRPAAVLVYNGQADIIVARETYEDLIRN 428


>gi|296133144|ref|YP_003640391.1| diaminopimelate decarboxylase [Thermincola sp. JR]
 gi|296031722|gb|ADG82490.1| diaminopimelate decarboxylase [Thermincola potens JR]
          Length = 446

 Score =  235 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 62/400 (15%), Positives = 124/400 (31%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++D++ +  N               +++ A K F A  M + + +   G    S 
Sbjct: 30  GTPLYVMDEEFIRQNCKAYYESFTGAYPNSEVIYASKAFLAIAMCNIIEEEGLGLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+      KF      ++   K  E   +   +N    + +   +++     A      
Sbjct: 90  GELYTALKAKFPTGRIYFHGNNKSPEEIRMALEANIGRFVVDNTYEMDLLNSIAGEMNKK 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I +RI P +           +  S+ G         E  K  +  E   + GL  H  
Sbjct: 150 ANILIRITPGIEAHTHEYIQTGQIDSKFGLVLSNGQAMEGIKKALGLENLILKGLHCHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            +      +    + + +           +I  ++LGGG              +      
Sbjct: 210 SQIFELQSYQHAAEVMMEYIQKVTAETGVEITELNLGGGFGIYYSAGDRPASIKTYATIV 269

Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            +              ++ +EPG +IV    T   T+  + +       V     +  + 
Sbjct: 270 METVQRKAREFNINVPKVIVEPGRSIVGAAGTTLYTIGSVKDIPGVRKYVAVDGGMADNP 329

Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +  N           + G+ C +GD+         V+ GD ++      
Sbjct: 330 RPALYQARYEALVANKADQPKNDEVSIAGKCCESGDMLIWDLAVPEVEPGDILAVSCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           YN +  + +N +  P + + N       +R  +Y D   N
Sbjct: 390 YNYSMASNYNRLTKPAVVLVNRGNAELIVRRETYEDLVQN 429


>gi|269963934|ref|ZP_06178245.1| carboxynorspermidine decarboxylase [Vibrio harveyi 1DA3]
 gi|269831334|gb|EEZ85482.1| carboxynorspermidine decarboxylase [Vibrio harveyi 1DA3]
          Length = 377

 Score =  235 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 167/368 (45%), Positives = 243/368 (66%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPY++I++ KL+ NL+ A  +++ +GVKL+LALKCF+ WG+FD +  Y+DGTTSS  +
Sbjct: 6   LKTPYFMINEDKLVENLEKAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG+E FGGETHAY+V Y + ++  V   CD +IFN+ SQL  ++   +     IGLR
Sbjct: 66  EVKLGYETFGGETHAYSVGYSEDDVREVADICDKMIFNSQSQLAAYRHIVEGKA-SIGLR 124

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP VSY+   LA+P R +SRLG +           ++G+MFH NCENK    F  +L +
Sbjct: 125 LNPGVSYAGQDLANPARQYSRLGVQADHIKPEIFDGIDGVMFHMNCENKDVDTFIGLLDS 184

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I  +FG ++ +++W+S+GGG+ FT   Y ++     LK FSEK+ VQ+YLEPGEAI+T T
Sbjct: 185 ISDQFGEYLNKLDWVSMGGGVFFTWPGYDIEKLGLALKAFSEKHGVQMYLEPGEAIITKT 244

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299
           T L  TV+DI EN+K   IVDS+ EAH  D L+Y E A+I     +G +  ++   SCLA
Sbjct: 245 TDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPASILEASESGEHEYVIGSCSCLA 304

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F   +FE+P++IG R+   D AGY + + NWFNG+ MP++  +   G I+ + EF Y
Sbjct: 305 GDQFCVANFEQPLEIGQRLHILDSAGYTMVKLNWFNGLRMPSVYCERSSGEIQKLNEFDY 364

Query: 360 NDYYNNLS 367
           +D+  +LS
Sbjct: 365 SDFKRSLS 372


>gi|209967337|ref|YP_002300252.1| diaminopimelate decarboxylase [Rhodospirillum centenum SW]
 gi|209960803|gb|ACJ01440.1| diaminopimelate decarboxylase [Rhodospirillum centenum SW]
          Length = 436

 Score =  235 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 64/395 (16%), Positives = 125/395 (31%), Gaps = 30/395 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG-----VKLLLALKCFAAWGMFDTLNQYMDGTTS 57
            TP Y+    +L  N           G     V +  ALK  +   +  TL     G   
Sbjct: 31  GTPAYVYSTAELRANWRAYADAFDLDGPGGRDVAVCYALKANSNLAVIRTLTALGAGADV 90

Query: 58  SSLYEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114
            S+ E+          +   ++     +D    A+ +    I   ++ +L+     A  L
Sbjct: 91  VSVGEMQRALVAGIPADRIVFSGVGKTRDELAAALKAGIHQINVESLPELDLLSAVASGL 150

Query: 115 --HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHN 165
                + LR+NP V           R   + G        +  +          G+  H 
Sbjct: 151 GLVAPVALRVNPDVDAQTHGKIATGRKEDKFGIDWSQAGAAFARAAALPGLRPLGVAIHI 210

Query: 166 NCENKSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYP----VKDFCQRL 218
             +      F+     +     +       IE I LGGG+    ++       + + Q +
Sbjct: 211 GSQLLKTSPFALAFAKVAELVTDLRAHGIGIERIDLGGGVGVPYREEDIGPDHRAYAQVV 270

Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQE 277
           +E        I LEPG ++V +   L + V+ + E   +  +++D+++   +   L    
Sbjct: 271 RETVGHLGCHITLEPGRSLVASAGVLLSRVVHVKEGLHRRFLVLDAAMNDLIRPSLYDAW 330

Query: 278 SATIYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
              +               V G  C +GD F +     P++ GD ++      Y     +
Sbjct: 331 HTILPVRQPARGAPLSAMDVVGPVCESGDTFAKGRRLPPMQAGDLVAILTAGAYGAVMAS 390

Query: 333 WFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367
            +N   +    +          R  +  +     S
Sbjct: 391 TYNSRPLVPEVLVAGGERAVVRRRPTLEELLAMES 425


>gi|291556836|emb|CBL33953.1| carboxynorspermidine decarboxylase [Eubacterium siraeum V10Sc8a]
          Length = 392

 Score =  235 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 122/383 (31%), Positives = 193/383 (50%), Gaps = 23/383 (6%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP Y+ ++  L  N +    ++   G K+LLA K F+ +  +  ++ Y+ GTT+S LYE 
Sbjct: 13  TPCYVTEECYLRRNCEILKSVQDMTGCKILLAQKAFSMYSTYPLISGYLSGTTASGLYEA 72

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
            LG+E FG ETH ++ AY D EI+ +       +FN++ Q    +D  +  H  I +   
Sbjct: 73  RLGYEYFGNETHVFSPAYTDSEINELAKYAGHFVFNSIRQFALHRDAVKDKHCLIRVNPR 132

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKSFLCFS 176
            S       + DP  P SRLG+      E   +        ++GL FH  CE  S     
Sbjct: 133 FSTQE-GHEIYDPCAPGSRLGQTLASFEEDIKRYGESILDEIDGLHFHTLCEQNSDDLKR 191

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
              + +E +FG ++ ++  I+ GGG H T  DY +    + +  F  +Y +++YLEPGEA
Sbjct: 192 TAKE-VEVQFGKYLDKMSVINFGGGHHITRDDYDIDTLVEVINHFKNEYGLEVYLEPGEA 250

Query: 237 IVTNTTTLNTTVLDISENIKNLVIV----DSSVEAHVPDYLLYQESATIYPNTG------ 286
           +  N   L TTVLD+ +   N        D+S   H+PD L       I    G      
Sbjct: 251 VALNAGFLVTTVLDVIDGKVNGEDDIAILDASAACHMPDVLEMPYRPVIIQPNGNIAGEK 310

Query: 287 ---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343
                T  + G +CLAGD+ G++ F++P+K GDR+   D++ Y++ + N FNG+ +P+I 
Sbjct: 311 GERAVTVRLGGNTCLAGDVIGDYSFDEPLKPGDRLVLCDMSIYSMVKNNTFNGMALPSIY 370

Query: 344 VKNVDGTIKAIREFSYNDYYNNL 366
             N    ++ IREFSY+D+   L
Sbjct: 371 -YNTSLGMRKIREFSYDDFRCRL 392


>gi|27376494|ref|NP_768023.1| diaminopimelate decarboxylase [Bradyrhizobium japonicum USDA 110]
 gi|27349634|dbj|BAC46648.1| diaminopimelate decarboxylase [Bradyrhizobium japonicum USDA 110]
          Length = 421

 Score =  235 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 63/390 (16%), Positives = 112/390 (28%), Gaps = 28/390 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +            V +  A+K  +   +  TL +   G    S  
Sbjct: 25  VGTPFYCYSTATLERHYRVFADAFAGEKVLVCYAMKANSNQSVLRTLARLGAGADVVSGG 84

Query: 62  EVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+              ++     +D    A+ ++   +   +  +L      A ++ K  
Sbjct: 85  ELKRALAAGIPARKILFSGVGKTEDELRAALAADILCLNVESEPELELLSRLATEMGKTA 144

Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            +  R+NP V           +  ++ G       E   +        V G   H   + 
Sbjct: 145 RISVRVNPDVDAGTHAKISTGKSENKFGIPIAHAREVYARAAKLPGIQVTGTDVHIGSQI 204

Query: 170 KSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEF 221
                     +      +        I  +  GGG+                +   +K  
Sbjct: 205 TDLSKMETAFRILSEFVQTLRADGHDISHVDFGGGLGIPYYMDREAPPAPDAYAAMVKRV 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
           S      +  EPG  IV N   L   V+ +   + KN VI+D+++   +    LY+    
Sbjct: 265 SHNLGCTLMFEPGRMIVGNAGILVAKVIYVKHGDGKNFVIIDAAMNDLIRPT-LYEAHHD 323

Query: 281 IYPNTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
           I P T P        A V G  C  GD           K GD ++      Y   +   +
Sbjct: 324 ILPVTQPARDAATMVADVVGPVCETGDYLALDRTLPTPKAGDLLAIMTAGAYGAVQAGTY 383

Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           N   +    +   D                
Sbjct: 384 NTRPLVPEVLVKDDQYAVVRPRIDVEQLIA 413


>gi|332994942|gb|AEF04997.1| putative diaminopimelate decarboxylase [Alteromonas sp. SN2]
          Length = 416

 Score =  235 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 71/384 (18%), Positives = 124/384 (32%), Gaps = 25/384 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP Y+  +  L  +              +  A+K  +  G+  TL +   G    S  E
Sbjct: 26  QTPVYVYSRATLERHWHAFNDAIGEHPHLICYAVKANSNLGVLSTLAKIGSGFDIVSGGE 85

Query: 63  -VMLGHEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
              +           ++      D    A+          +  +L++    A+ L     
Sbjct: 86  LARVIEAGGDASKVVFSGVGKKADEIRYALEQGIMCFNVESEPELHRINAVAESLGKKAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNC--- 167
           I LRINP V              ++ G   +  +++          NV G+  H      
Sbjct: 146 ISLRINPDVDAKTHPYISTGLKANKFGIARERALQTYELAASLPYLNVVGMDCHIGSQLT 205

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
           E   F+     L  +  E       I+ + +GGG+  T       +P        ++   
Sbjct: 206 EIGPFVDALERLLLLIDELAERGITIDHLDVGGGLGVTYNDEEPPHPKAYAAAMAEKMVG 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATI- 281
           + ++++ LEPG AI  N   L T V  I E   K+  IVD+++   +   L       I 
Sbjct: 266 RENLKLILEPGRAIAANAGILVTEVEFIKEGEEKSFAIVDAAMNDLLRPALYSAWQNIIP 325

Query: 282 ---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
                        V G  C  GD  G+      ++  D ++      Y     + +N   
Sbjct: 326 VKQESTATARNYDVVGPVCETGDFIGKDRELA-IEPTDLLAVRSAGAYGFAMASNYNSRC 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362
            P   + + D TI         D 
Sbjct: 385 RPAEIMVDGDATIVVREREILKDL 408


>gi|296273951|ref|YP_003656582.1| carboxynorspermidine decarboxylase [Arcobacter nitrofigilis DSM
           7299]
 gi|296098125|gb|ADG94075.1| carboxynorspermidine decarboxylase [Arcobacter nitrofigilis DSM
           7299]
          Length = 378

 Score =  235 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 145/370 (39%), Positives = 221/370 (59%), Gaps = 7/370 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P ++ +++ L  NL+    I+  A VK+LLALK F+ +  FD   +Y+ G  +S L+
Sbjct: 11  LPSPCFVCEEELLKKNLELLKKIQDEADVKILLALKGFSLYSTFDLCKEYLKGCCASGLH 70

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E +L  ++FG E H Y+ A+K+ E+D ++S  + I+FN++SQL KF++KA      IGLR
Sbjct: 71  EALLASKEFGREVHTYSPAFKEEEVDEIVSLSNHIVFNSISQLKKFENKAIG-QTSIGLR 129

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP  S  +  L +P   FSRLG   K+  +  I NV+GL FH  CE          LK+
Sbjct: 130 VNPEYSSVEVDLYNPCGAFSRLGITRKNFDKDAIFNVDGLHFHALCEQN-VDALEGALKS 188

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240
            E++FG F+ +++W++ GGG H T  DY V      LKEF  +Y   ++YLEPGEA+   
Sbjct: 189 FEEKFGEFLPKMKWVNFGGGHHITRADYDVNGLVTLLKEFKIRYPHLEVYLEPGEAVGWK 248

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT----GPYTAMVCGRS 296
           T  L+ TVLDI  N  ++ I+D+S EAH+PD L     A I  +       +T  + G +
Sbjct: 249 TGYLSATVLDIVNNGMDIAILDTSAEAHMPDTLAMPYRADIRNSAESGVKAHTYRLGGNT 308

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CLAGDI G++ F+KP+K+GD+I  ED+  Y + +   FNGI +P+IA+K  D   + ++ 
Sbjct: 309 CLAGDIIGDYSFDKPLKVGDKIILEDMIHYTMVKTTTFNGIKLPSIAIKKADDCYQIVKN 368

Query: 357 FSYNDYYNNL 366
           F YN+Y   L
Sbjct: 369 FGYNEYKARL 378


>gi|328474721|gb|EGF45526.1| carboxynorspermidine decarboxylase [Vibrio parahaemolyticus 10329]
          Length = 377

 Score =  235 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 168/368 (45%), Positives = 244/368 (66%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPY++I++ KL+ NL+ A  +++ +GVKL+LALKCF+ WG+FD +  Y+DGTTSS  +
Sbjct: 6   LKTPYFMINEDKLIANLEKAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG+E FGGETHAY+V Y + ++  V   CD +IFN+ SQL  ++   +     IGLR
Sbjct: 66  EVKLGYETFGGETHAYSVGYSEDDVREVADICDKMIFNSQSQLAAYRHIVEGKA-SIGLR 124

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP VSY+   LA+P R FSRLG +         + ++G+MFH NCENK    F  +L  
Sbjct: 125 LNPGVSYAGQDLANPARKFSRLGVQADHIKPEVFEGIDGVMFHMNCENKDVDAFIGLLDA 184

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I ++FG ++ +++W+S+GGG+ FT   Y ++     LK FSEK+ VQ+YLEPGEAI+T T
Sbjct: 185 ISEQFGEYLNKLDWVSMGGGVFFTWPGYDIEKLGLALKAFSEKHGVQMYLEPGEAIITKT 244

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299
           T L  TV+DI EN+K   IVDS+ EAH  D L+Y E A+I    + G +  ++   SCLA
Sbjct: 245 TDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPASILEASDNGEHEYVIGSCSCLA 304

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F   +FE+P++IG R+   D AGY + + NWFNG+ MP++  +   G I+ + EF Y
Sbjct: 305 GDQFCVANFEQPLEIGQRLHILDSAGYTMVKLNWFNGLRMPSVYCERSSGEIQKLNEFDY 364

Query: 360 NDYYNNLS 367
           +D+  +LS
Sbjct: 365 SDFKRSLS 372


>gi|226952075|ref|ZP_03822539.1| diaminopimelate decarboxylase [Acinetobacter sp. ATCC 27244]
 gi|226837167|gb|EEH69550.1| diaminopimelate decarboxylase [Acinetobacter sp. ATCC 27244]
          Length = 407

 Score =  235 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 64/389 (16%), Positives = 122/389 (31%), Gaps = 26/389 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  K  L  +             ++  A+K  +   + + L +   G    +  E
Sbjct: 16  GTPLYVYSKATLEKHYLDMDRAFDFIDHQICFAVKSNSNIAVLNVLAKLGAGFDIVTGGE 75

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++   K                   + ++L++ +  A KL     
Sbjct: 76  LARVLAAGGDPAKIVFSGLGKSEADIEKALTVGIACFNVESHAELDRIQKVAAKLGKKAP 135

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNC--- 167
           I LR+NP V              ++ G        +           + G+  H      
Sbjct: 136 ISLRVNPDVDAKTHPYISTGLKENKFGIPSDAVDATYQYAASLSNLEIVGIDCHIGSQLT 195

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEK 224
           E K F+     +  + ++       ++ I +GGG+    KD       +    ++   EK
Sbjct: 196 ETKPFVDALDRVILMIEQLKKLGINLKHIDIGGGLGVCYKDETPPTVAEYANSMRPALEK 255

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++Y+EPG +I  N  TL T V L    N +N  I+D+++   +   L          
Sbjct: 256 LGLKVYMEPGRSISANAGTLLTKVDLLKPTNHRNFAIIDAAMNDLIRPALYEAWMDIQSV 315

Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
           N        T  + G  C  GD  G+      ++  D ++      Y     + +N    
Sbjct: 316 NPNSDVEVKTWDLVGAICETGDFLGKERNLA-LQENDVLAVLGAGAYGFVMSSNYNSRGR 374

Query: 340 PTIAVKNVDGTIKAIREFSYNDY--YNNL 366
               + N D         +         L
Sbjct: 375 AAEVMVNGDQAYLIRERETIESLWEKERL 403


>gi|299769073|ref|YP_003731099.1| diaminopimelate decarboxylase [Acinetobacter sp. DR1]
 gi|298699161|gb|ADI89726.1| diaminopimelate decarboxylase [Acinetobacter sp. DR1]
          Length = 416

 Score =  235 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 64/388 (16%), Positives = 123/388 (31%), Gaps = 24/388 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  K     +             ++  A+K  +   + + L +   G    S  E
Sbjct: 25  GTPLYVYSKAAFEKHYLDMDRAFDFIDHQICFAVKSNSNLAVLNVLAKLGAGFDIVSGGE 84

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++   K         N         + ++L++ +  A +L     
Sbjct: 85  LARVLKAGGDASKVVFSGLGKTEADIETSLNVGIACFNVESYAELDRLQKVAARLGKKAP 144

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNC--- 167
           I LR+NP V              ++ G                    + G+  H      
Sbjct: 145 ISLRVNPDVDAKTHPYISTGLKENKFGIPSDTVYETYQYAASLPNLEIIGIDCHIGSQLT 204

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224
           E K F+     +  + +E       ++ I +GGG+    KD       ++   +K   EK
Sbjct: 205 ETKPFVDALDRVMLMIEELKKLGINLKHIDIGGGLGVCYKDETPPSVEEYANSMKPALEK 264

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQES----A 279
             +++Y+EPG +I  N   L T V L    + +N  I+D+++   +   L          
Sbjct: 265 LGLKVYMEPGRSISANAGVLLTKVDLLKPTSHRNFAIIDAAMNDLIRPALYEAWMDIQPV 324

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
               +T   T  + G  C  GD  G+      +K  D ++      Y     + +N    
Sbjct: 325 VPSSDTEEKTWDLVGAICETGDFIGKDRSLA-LKENDLLAVLGAGAYGFVMSSNYNTRGR 383

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNNLS 367
               + + D         +    +   S
Sbjct: 384 AAEVMVSGDKAHLIRERETVESLWEKES 411


>gi|84393560|ref|ZP_00992314.1| diaminopimelate decarboxylase [Vibrio splendidus 12B01]
 gi|84375839|gb|EAP92732.1| diaminopimelate decarboxylase [Vibrio splendidus 12B01]
          Length = 417

 Score =  235 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 59/378 (15%), Positives = 112/378 (29%), Gaps = 24/378 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  + +            +  A+K  +  G+ +TL +   G    S  E
Sbjct: 27  GTPLYVYSRATLERHWNAFDSSVGEHPHLVCYAVKANSNLGVLNTLARMGSGFDIVSGGE 86

Query: 63  V-MLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +  +           ++   K       A+  N       +  +L +    A +L     
Sbjct: 87  LERVVAAGGDPAKVVFSGVGKTAAEMKRALELNIKCFNVESEPELERLNKVAGELGVKAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           I LRINP V  +           ++ G                    ++G+  H   +  
Sbjct: 147 ISLRINPDVDANTHPYISTGLRDNKFGIAFDRAPAVYAFAKTLDNLSIHGIDCHIGSQLT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F         +  +       I+ + +GGG+           P       L     
Sbjct: 207 DIEPFIDATDRLLALIDQLRANDINIKHLDVGGGLGVVYRDELPPQPSDYAKALLARLDN 266

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279
              +++  EPG AI  N   L T V  +         I+D+++   +   L         
Sbjct: 267 HSDLELIFEPGRAIAANAGVLLTKVEFLKPTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                    T  + G  C  GD  G+      ++ GD ++      Y     + +N  + 
Sbjct: 327 VSPRQGEAVTYDLVGPICETGDFLGKDRDLV-LEEGDLLAVRSAGAYGFAMSSNYNTRSR 385

Query: 340 PTIAVKNVDGTIKAIREF 357
               + + D T    +  
Sbjct: 386 AAEVMVDGDKTHLVRQRE 403


>gi|90426344|ref|YP_534714.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris BisB18]
 gi|90108358|gb|ABD90395.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris BisB18]
          Length = 421

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 57/389 (14%), Positives = 106/389 (27%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +              +  A+K  +   +  TL +   G    S  
Sbjct: 25  VGTPFYCYSTATLERHYRVFSEAFAGVDALVCYAMKANSNQSVLRTLAKLGAGADVVSGG 84

Query: 62  EVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118
           E+          +   ++   K           D   I   +  +L      A ++ +  
Sbjct: 85  ELQRAVAAGIPPQKILFSGVGKTATELRAALAHDILCINVESEPELELLSRIASEMGRTA 144

Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            +  R+NP V           +  ++ G       E   +        V G+  H   + 
Sbjct: 145 RISVRVNPDVDSGSHAKISTGKSENKFGIPISRAREVYARAAKLPGLKVTGVDMHIGSQI 204

Query: 170 KSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221
                     + +             I  +  GGG+     + P      + +   +K  
Sbjct: 205 TDLAPLEVAFRLLADFVTVLRGDGHTISHVDFGGGLGIPYFEEPGVPPEPQAYAAMVKRV 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
           +      +  EPG  IV N   L   V  +   + KN VI+D+++   +   L       
Sbjct: 265 THNLGCTLMFEPGRLIVGNAGILVARVTYVKRGDAKNFVIIDAAMNDLIRPTLYEAYHDI 324

Query: 281 IYPNTG-----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +             A V G  C +GD             GD I+      Y   +   +N
Sbjct: 325 LPVQQAAPGSRDIVADVVGPVCESGDYLALDRSMPEPAPGDLIAIMTAGAYGAVQACTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    +   D                
Sbjct: 385 TRALVPEVLVKGDNYAVVRPRVDVEQLIA 413


>gi|300727208|ref|ZP_07060624.1| carboxynorspermidine decarboxylase [Prevotella bryantii B14]
 gi|299775446|gb|EFI72040.1| carboxynorspermidine decarboxylase [Prevotella bryantii B14]
          Length = 384

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 116/375 (30%), Positives = 195/375 (52%), Gaps = 14/375 (3%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y++++Q+L NNL     + +  G+ ++LA K +A W  F    +Y+  TT+SSL E  
Sbjct: 10  PVYVLEEQRLRNNLSLISEVARTGGIDIILAFKAYALWKTFPIFREYIRATTASSLSEAK 69

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI--GLRI 122
           L   +FG + H ++ AY D EID +      + FN++SQ  ++  + ++ + +I  G+RI
Sbjct: 70  LALLEFGSKAHTFSPAYTDYEIDEIAHCSSHLTFNSLSQYQRYHQRVRQANSEISLGIRI 129

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           NP  S  +  L +P  P +R G       E   +++ G   H +CEN S +    +  +I
Sbjct: 130 NPEYSEIETDLYNPCAPGTRFGVSADKLPEILPEDIEGFHCHCHCENGSDVFQRTLT-HI 188

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNT 241
           E +F  +  QI+WI+ GGG   T KDY +    Q L +F +KY    + LEPG A    T
Sbjct: 189 EDKFAKWFPQIKWINFGGGHLMTRKDYDIPLLIQILTDFKKKYPNLHVILEPGSAFGWQT 248

Query: 242 TTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT---------GPYTAM 291
            +L + V+D+ E+      + + S   H+PD L      ++              PY   
Sbjct: 249 GSLVSQVVDVVEDKGIKTAILNVSFTCHMPDCLEMPYWPSVRNAKVIEGRYDKSIPYLYR 308

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
           + G SCL+GD    + F+  ++IG+ I FED+  Y   + N FNGI  P+I + +++G +
Sbjct: 309 LGGNSCLSGDFMESWQFDHELQIGENIIFEDMLHYTTVKTNMFNGITHPSIGIVHLNGEL 368

Query: 352 KAIREFSYNDYYNNL 366
           + +++F Y DY + +
Sbjct: 369 EILKDFGYEDYRDRM 383


>gi|296113696|ref|YP_003627634.1| diaminopimelate decarboxylase [Moraxella catarrhalis RH4]
 gi|295921390|gb|ADG61741.1| diaminopimelate decarboxylase [Moraxella catarrhalis RH4]
 gi|326562436|gb|EGE12755.1| diaminopimelate decarboxylase [Moraxella catarrhalis 7169]
 gi|326562805|gb|EGE13100.1| diaminopimelate decarboxylase [Moraxella catarrhalis 46P47B1]
 gi|326563210|gb|EGE13478.1| diaminopimelate decarboxylase [Moraxella catarrhalis 12P80B1]
 gi|326563474|gb|EGE13737.1| diaminopimelate decarboxylase [Moraxella catarrhalis 103P14B1]
 gi|326569144|gb|EGE19206.1| diaminopimelate decarboxylase [Moraxella catarrhalis BC1]
 gi|326570630|gb|EGE20666.1| diaminopimelate decarboxylase [Moraxella catarrhalis BC7]
 gi|326571337|gb|EGE21354.1| diaminopimelate decarboxylase [Moraxella catarrhalis BC8]
 gi|326573784|gb|EGE23741.1| diaminopimelate decarboxylase [Moraxella catarrhalis 101P30B1]
          Length = 435

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 67/381 (17%), Positives = 128/381 (33%), Gaps = 22/381 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y   ++ LL N  +          ++  A+K  +   +  TL +   G    S  E
Sbjct: 50  GTPLYAYSQRTLLENYQSYTDAFDAIDHQICYAVKANSNLAILKTLAKAGAGFDIVSKGE 109

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG- 119
           +    +    +   Y+   K  +        D       ++S+L+   + A + ++    
Sbjct: 110 LARVLQVADAKKVVYSGVGKTADDIEYALKADIHCFNVESLSELDTINEVAGRQNQIARI 169

Query: 120 -LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKS 171
            LRINP V              ++ G   +  + + +         + G+  H   +   
Sbjct: 170 SLRINPDVDAKTHPYISTGMKDNKFGISHEQAVAAYVYAHHLPNLKIVGIDCHIGSQLLD 229

Query: 172 FLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEKY 225
              FS  L  + +          +++ I LGGG+     D            L    ++ 
Sbjct: 230 TDGFSDALDKLIELIDTLTDKGIKLQHIDLGGGLGVRYIDENPVSIDQVATVLLPRLKQL 289

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLL---YQESATI 281
            +++YLEPG ++V N   L TTV  +         IVD+S+   +   L           
Sbjct: 290 GLKLYLEPGRSLVANAGVLLTTVDVLKPTEFKNFAIVDASMSELIRPALYESQMAIIPAK 349

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                  T  V G  C + D  G+      +++GD ++      Y  +    +N    P 
Sbjct: 350 LSRDTAKTWDVVGTVCESSDFLGKDRILS-LQVGDTLAVTGAGAYGFSMACNYNTRPRPC 408

Query: 342 IAVKNVDGTIKAIREFSYNDY 362
             + N        +  + +D 
Sbjct: 409 EVMVNHGTHRLIRKREALDDL 429


>gi|319897770|ref|YP_004135967.1| diaminopimelate decarboxylase, plp-binding [Haemophilus influenzae
           F3031]
 gi|317433276|emb|CBY81651.1| diaminopimelate decarboxylase, PLP-binding [Haemophilus influenzae
           F3031]
          Length = 415

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 58/384 (15%), Positives = 116/384 (30%), Gaps = 25/384 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +  G+ + + +   G    S  E
Sbjct: 26  GTPLYVYSRATLERHWHAFDSAFGKRPHLICFAVKSCSNIGVLNIMAKLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +              ++     ++  + A+          +VS+L      A        
Sbjct: 86  LERVLAAGGDASKVVFSGVAKSREEIMRALEVGIRCFNVESVSELKHINQIAGEMGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G    +  +            + G+  H   +  
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVNEARKVYNLASTLPNIKITGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F         + ++       ++ + LGGG+  T       +P       L++  +
Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGLGVTYTDETPPHPSDYANALLEKLKD 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
              ++I LEPG AI  N   L   V  +     +N  I D+ +   +   L       + 
Sbjct: 266 YPELEIILEPGRAISANAGILVAKVQYLKSNESRNFAITDTGMNDMIRPALYEAYMNIVE 325

Query: 283 PNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +           V G  C   D  G+      +  GD I+      Y  +  + +N   
Sbjct: 326 IDRTLAREKAIYDVVGPVCETSDFLGKQRELS-IAEGDYIAQCSAGAYGASMSSNYNSRA 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362
                + + D +    R  +  + 
Sbjct: 385 RTAEVLVDGDQSYLIRRRETLQEL 408


>gi|229845773|ref|ZP_04465885.1| diaminopimelate decarboxylase [Haemophilus influenzae 7P49H1]
 gi|229810777|gb|EEP46494.1| diaminopimelate decarboxylase [Haemophilus influenzae 7P49H1]
          Length = 415

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 59/384 (15%), Positives = 115/384 (29%), Gaps = 25/384 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +  G+ + + +   G    S  E
Sbjct: 26  GTPLYVYSRATLERHWHAFDSAFGKHPHLICFAVKSCSNIGVLNIMAKLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +              ++     ++  + A+          +VS+L      A        
Sbjct: 86  LERVLAAGGDASKVVFSGVAKSREEIMRALEVGIRCFNVESVSELKHINQIAGEMGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G    +  E            + G+  H   +  
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVNEAREVYKLASTLPNIKITGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F         + ++       ++ + LGGG+  T       +P       L++   
Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGLGVTYTDETPPHPSDYANALLEKLKN 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
              ++I LEPG AI  N   L   V  +     +N  I D+ +   +   L       + 
Sbjct: 266 YPELEIILEPGRAISANAGILVAKVQYLKSNESRNFAITDTGMNDMIRPALYEAYMNIVE 325

Query: 283 PNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +           V G  C   D  G+      +  GD I+      Y  +  + +N   
Sbjct: 326 IDRTLEREKAIYDVVGPVCETSDFLGKQRELS-IAEGDYIAQCSAGAYGASMSSNYNSRA 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362
                + + D +    R  +  + 
Sbjct: 385 RTAEVLVDGDQSYLIRRRETLQEL 408


>gi|190893634|ref|YP_001980176.1| diaminopimelate decarboxylase [Rhizobium etli CIAT 652]
 gi|190698913|gb|ACE92998.1| diaminopimelate decarboxylase protein [Rhizobium etli CIAT 652]
          Length = 422

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 61/389 (15%), Positives = 110/389 (28%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+     L  +         +    +  A+K  +   +  TL +   G    S  
Sbjct: 25  VGTPFYVYSTATLERHYRVFSEAFADMDSMVCYAMKANSNQAVLKTLGRLGAGIDVVSEG 84

Query: 62  EVMLGHEK-FGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E+              ++           A+ +        +  +L     +A       
Sbjct: 85  ELRRALAADIPASRIMFSGVGKTPSEMDFALEAGIYCFNVESEPELEILNQRAVSAGKKA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
            +  RINP V           +  ++ G   +                V G+  H   + 
Sbjct: 145 PVSFRINPDVDAKTHSKISTGKKENKFGISWERARAIYAHAAKLPGIEVTGIDMHIGSQI 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221
                F    K +             I+ + +GGG+    KD          +   +K  
Sbjct: 205 TELQPFDDAFKLLRDLVATLRADGHTIDHVDIGGGLGVPYKDDNNPPPLPDAYAAIVKNQ 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
               + ++  EPG  IV N   L T VL + +   K  VIVD ++   +   L       
Sbjct: 265 LRDLNCKVITEPGRLIVGNAGILVTEVLYVKDGGEKTFVIVDGAMNDLIRPTLYEAYHEI 324

Query: 281 I-----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                   N     A V G  C  GD           K GD ++      Y   +   +N
Sbjct: 325 RPVTISAANAPRIRADVVGPVCETGDYLALDREMAMPKPGDLLAVSTAGAYGAVQAGTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    +             +Y +  +
Sbjct: 385 SRLLVPEVLVKGGDFHAIRPRRTYAELIS 413


>gi|209551143|ref|YP_002283060.1| diaminopimelate decarboxylase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209536899|gb|ACI56834.1| diaminopimelate decarboxylase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 422

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 65/388 (16%), Positives = 112/388 (28%), Gaps = 26/388 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+     L  +         +    +  A+K  +   +  TL +   G    S  
Sbjct: 25  VGTPFYVYSTATLERHYRVFSEAFADMDSMVCYAMKANSNQAVLKTLGRLGAGIDVVSEG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E+              ++   K  +    A+ +        +  +L     +A K     
Sbjct: 85  ELRRALAAGIPASRIMFSGVGKTPQEMDFALEAGIYCFNVESEPELEILNQRAVKAGTKA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
            +  RINP V           +  ++ G   +                V G+  H   + 
Sbjct: 145 PVSFRINPDVDAKTHSKISTGKKENKFGISWERARAIYAHAARLPGIEVTGIDMHIGSQI 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221
                F    K +             I+ + +GGG+    KD          +   +K  
Sbjct: 205 TELQPFDDAFKLLHDLVATLRADGHTIDHVDIGGGLGIPYKDDNNPPPLPDAYAAIVKNQ 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
               + +I  EPG  IV N   L T VL + +   K  VIVD ++   +   L       
Sbjct: 265 LRGLNCKIITEPGRLIVGNAGILVTEVLYVKDGGEKTFVIVDGAMNDLIRPTLYEAYHEI 324

Query: 281 I-----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                   N     A V G  C  GD           K GD I+      Y   +   +N
Sbjct: 325 RPVTISAANAPRIRADVVGPVCETGDYLALDREMAMPKPGDLIAVSTAGAYGAVQAGTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY 363
              +    +             +Y +  
Sbjct: 385 SRLLVPEVLVKGSDFHTIRPRRTYAELI 412


>gi|167749127|ref|ZP_02421254.1| hypothetical protein EUBSIR_00071 [Eubacterium siraeum DSM 15702]
 gi|167657900|gb|EDS02030.1| hypothetical protein EUBSIR_00071 [Eubacterium siraeum DSM 15702]
          Length = 392

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 124/385 (32%), Positives = 195/385 (50%), Gaps = 25/385 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ ++  L  N +    ++   G K+LLA K F+ +  +  ++ Y+ GTT+S LYE
Sbjct: 12  DTPCYVTEECYLKRNCEILKSVQDMTGCKILLAQKAFSMYSTYPLISGYLSGTTASGLYE 71

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
             LG+E FG ETH ++ AY D EI+ ++      +FN++ Q    +D      K   +R+
Sbjct: 72  ARLGYEYFGNETHVFSPAYTDKEINELVKYAGHFVFNSIRQFALHRDAV--KDKHCLIRV 129

Query: 123 NPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKSFLC 174
           NP  S      + DP  P SRLG+      E   +        ++GL FH  CE  S   
Sbjct: 130 NPRFSTQEGHEIYDPCAPGSRLGQTLASFEEDIKRYGKEILDEIDGLHFHTLCEQNSDDL 189

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
                + +E +FG ++ ++  I+ GGG H T  DY +    + +  F  +Y +++YLEPG
Sbjct: 190 KRTAKE-VEVQFGKYLDKMSVINFGGGHHITRDDYDIDTLVEVINHFKNEYGLEVYLEPG 248

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIV----DSSVEAHVPDYLLYQESATIYPNTG---- 286
           EA+  N   L TTVLD+ +   N        D+S   H+PD L       I    G    
Sbjct: 249 EAVALNAGFLVTTVLDVIDGKVNGEDDIAILDASAACHMPDVLEMPYRPVIIQPNGNIAG 308

Query: 287 -----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                  T  + G +CLAGD+ G++ F++P+K GDR+   D++ Y++ + N FNG+ +P+
Sbjct: 309 EKGERAVTVRLGGNTCLAGDVIGDYSFDEPLKPGDRLVLCDMSIYSMVKNNTFNGMALPS 368

Query: 342 IAVKNVDGTIKAIREFSYNDYYNNL 366
           I   N    ++ IREFSY D+   L
Sbjct: 369 IY-YNTSLGMREIREFSYEDFRCRL 392


>gi|110678901|ref|YP_681908.1| diaminopimelate decarboxylase [Roseobacter denitrificans OCh 114]
 gi|109455017|gb|ABG31222.1| diaminopimelate decarboxylase [Roseobacter denitrificans OCh 114]
          Length = 421

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 60/390 (15%), Positives = 115/390 (29%), Gaps = 26/390 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+YL     LL +              +  A+K  +   +  TL Q   G    S  
Sbjct: 25  VGTPFYLYSTATLLRHFRLFDEALDGMDHLVCYAMKAASNQAILKTLAQAGAGMDVVSGG 84

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116
           E +        G+   ++   K       A+          +  ++      A    +  
Sbjct: 85  EYLRAKAAGVPGDKIVFSGVGKTAAEIRLALEGGIRQFNVESEPEMEVLNAAALEMGVTA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCEN 169
            I +R+NP V           +  ++ G       E        +   V G+  H   + 
Sbjct: 145 PITIRVNPDVDAKTHAKIATGKSENKFGIPISRAREVYALAASMKGLEVIGIDVHIGSQL 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221
                F A    + +   +       I  + LGGG+                +   +K  
Sbjct: 205 TELAPFEAAYDKVAELTEQLRAEGHNIRRLDLGGGLGIPYARDNQAPPLPSDYGAMIKRK 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESAT 280
                 +I +EPG  IV N   + + V+ +         I+D ++   +   +       
Sbjct: 265 LGHLGCEIEIEPGRLIVGNAGIMVSEVIYVKSGEDRDFLIIDGAMNDLIRPAMYEAYHDI 324

Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           I               + G  C  GD F       PV  G+R++F     Y     + +N
Sbjct: 325 IPVVEPDPGVEQVKFDIVGPVCETGDTFARARIMPPVAAGERVAFRSAGAYGAVMSSEYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              +    + + D         ++++    
Sbjct: 385 SRPLIPEVLVHEDQFAVIRPRPTFDEMIKR 414


>gi|260466687|ref|ZP_05812874.1| diaminopimelate decarboxylase [Mesorhizobium opportunistum WSM2075]
 gi|259029550|gb|EEW30839.1| diaminopimelate decarboxylase [Mesorhizobium opportunistum WSM2075]
          Length = 422

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 66/388 (17%), Positives = 122/388 (31%), Gaps = 26/388 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +              +  A+K  +   +  TL +   G    S  
Sbjct: 25  VGTPFYCYSTATLTRHYRVFAQAFAGLDALVCYAMKANSNQAVLRTLARLGAGADVVSEG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116
           E+              ++   K       A+ +        +  +L     +A  L K  
Sbjct: 85  ELRRALAAGIPAGKILFSGVGKTAREIDFALTAGILCFNVESEPELELLSSRAVALGKVA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            I LRINP V           +  ++ G   +   +   +        V G+  H   + 
Sbjct: 145 PISLRINPDVDARTHKKISTGKAENKFGIPWQRARQVYARAAELPGIKVTGIDTHIGSQI 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221
                F      +             IE I +GGG+    +           + Q ++++
Sbjct: 205 TELQPFDDAFALLVDLVGALRADGHAIEHIDVGGGLGIPYRVDNNPPPLPDAYAQIVRKY 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
             K  +++  EPG  IV N   L + V+ + E + KN ++VD+++   +   L       
Sbjct: 265 VTKLGLKVMFEPGRLIVGNAGILVSEVIFVKEGDAKNFLVVDAAMNDLIRPTLYDAFHDV 324

Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                 P         V G  C  GD  G       +K GD ++      Y   +   +N
Sbjct: 325 RPVVQPPADTPRMMVDVVGPVCETGDYIGLDRDLPRLKAGDLVAVSTAGAYGAVQAGTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY 363
              +    + + D         +Y+D  
Sbjct: 385 TRLLVPEVLVDGDRFHVVRPRLTYDDLI 412


>gi|92118935|ref|YP_578664.1| diaminopimelate decarboxylase [Nitrobacter hamburgensis X14]
 gi|91801829|gb|ABE64204.1| diaminopimelate decarboxylase [Nitrobacter hamburgensis X14]
          Length = 421

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 58/390 (14%), Positives = 111/390 (28%), Gaps = 26/390 (6%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           ++ TP+Y      L  +              +  A+K  +   +  TL +   G    S 
Sbjct: 24  VVGTPFYCYSTATLERHYRVFADAFAGVDHLVCYAVKANSNQSVLRTLAKLGAGADVVSG 83

Query: 61  YEVMLGH-EKFGGETHAYNV-AYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKK 117
            E+              ++     D E+ A L+     I   +  +L+     A +  + 
Sbjct: 84  GELKRALAAGIPASKILFSGVGKTDAELRAALAVDVLCINVESEPELDLLSKLASEAGRT 143

Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCE 168
               +R+NP V           R  ++ G                    V G+  H   +
Sbjct: 144 ARISIRVNPDVDSGTHAKISTGRSENKFGIPIARARAVYAHAAKLPGIAVTGVDMHIGSQ 203

Query: 169 NKSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKE 220
                   A  + +             I  +  GGG+     +          + + ++ 
Sbjct: 204 ITDLGPMEAAFRLLADFVTTLRADGHTISHVDFGGGLGIPYYEDRAAPPEPLAYAEMVRR 263

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESA 279
            +      +  EPG  IV N   L T V+ +   + +N +I+D+++   +   L      
Sbjct: 264 VTHNLGCTLMFEPGRMIVGNAGILVTRVIYVKHGDARNFIIIDAAMNDLIRPTLYEAYHQ 323

Query: 280 TIYPNTGPYTAM-----VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
            I     P  A      V G  C  GD           + GD ++      Y   +   +
Sbjct: 324 IIPVRAAPKDAPVMVADVVGPVCETGDYLALGRNLPEPQAGDLLAIMTAGAYGAVQSGTY 383

Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           N   +    +   D                
Sbjct: 384 NTRALIPEVLVKDDQYAVVRPRIEVEQLIA 413


>gi|27364546|ref|NP_760074.1| diaminopimelate decarboxylase [Vibrio vulnificus CMCP6]
 gi|320154948|ref|YP_004187327.1| diaminopimelate decarboxylase [Vibrio vulnificus MO6-24/O]
 gi|27360665|gb|AAO09601.1| diaminopimelate decarboxylase [Vibrio vulnificus CMCP6]
 gi|319930260|gb|ADV85124.1| diaminopimelate decarboxylase [Vibrio vulnificus MO6-24/O]
          Length = 417

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 57/378 (15%), Positives = 106/378 (28%), Gaps = 24/378 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +        +     +  A+K  +  G+ +TL +   G    S  E
Sbjct: 27  GTPLYVYSRATLERHWHAFDRSVEGHPHLVCYAVKANSNLGVLNTLARLGSGFDIVSGGE 86

Query: 63  VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++   K       A+  N       +  +L +    A +L     
Sbjct: 87  LERVLAAGGDPRKVVFSGVGKTEAEMRRALELNIKCFNVESEPELERLNRVAGELGVKAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           I LRINP V              ++ G                   NV G+  H   +  
Sbjct: 147 ISLRINPDVDAQTHPYISTGLRDNKFGIAFDRAPAVYQFAQSLANLNVQGIDCHIGSQLT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
           +   F         +  +       I  + +GGG+    ++       +  K    +   
Sbjct: 207 AIEPFIDATDRLLALIDDLKEQGINIRHLDVGGGLGVVYRNELPPQPSEYAKALLGRLEN 266

Query: 228 Q----IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279
                +  EPG AI  N   L T V  +         I+D+++   +   L         
Sbjct: 267 HQDLELIFEPGRAIAANAGVLLTKVEFLKHTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                    T  + G  C  GD  G+      +   D ++      Y     + +N    
Sbjct: 327 VQPRQGEAVTYDLVGPICETGDFLGKDRSLV-LAENDLLAVRSAGAYGFVMSSNYNTRVR 385

Query: 340 PTIAVKNVDGTIKAIREF 357
               + +        +  
Sbjct: 386 AAEVMVDGKQHYLVRQRE 403


>gi|326572968|gb|EGE22947.1| diaminopimelate decarboxylase [Moraxella catarrhalis CO72]
          Length = 435

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 67/381 (17%), Positives = 128/381 (33%), Gaps = 22/381 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y   ++ LL N  +          ++  A+K  +   +  TL +   G    S  E
Sbjct: 50  GTPLYAYSQRALLENYQSYTDAFDAIDHQICYAVKANSNLAILKTLAKAGAGFDIVSKGE 109

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG- 119
           +    +    +   Y+   K  +        D       ++S+L+   + A + ++    
Sbjct: 110 LARVLQVADAKKVVYSGVGKTADDIEYALKADIHCFNVESLSELDTINEVAGRQNQIARI 169

Query: 120 -LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKS 171
            LRINP V              ++ G   +  + + +         + G+  H   +   
Sbjct: 170 SLRINPDVDAKTHPYISTGMKDNKFGISHEQAVAAYVYAHHLPNLKIVGIDCHIGSQLLD 229

Query: 172 FLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEKY 225
              FS  L  + +          +++ I LGGG+     D            L    ++ 
Sbjct: 230 TDGFSDALDKLIELIDTLTDKGIKLQHIDLGGGLGVRYIDENPVSIDQVATVLLPRLKQL 289

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLL---YQESATI 281
            +++YLEPG ++V N   L TTV  +         IVD+S+   +   L           
Sbjct: 290 GLKLYLEPGRSLVANAGVLLTTVDVLKPTEFKNFAIVDASMSELIRPALYESQMAIIPAK 349

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                  T  V G  C + D  G+      +++GD ++      Y  +    +N    P 
Sbjct: 350 LSRDTAKTWDVVGTVCESSDFLGKDRILS-LQVGDTLAVTGAGAYGFSMACNYNTRPRPC 408

Query: 342 IAVKNVDGTIKAIREFSYNDY 362
             + N        +  + +D 
Sbjct: 409 EVMVNHGTHRLIRKREALDDL 429


>gi|212633301|ref|YP_002309826.1| diaminopimelate decarboxylase [Shewanella piezotolerans WP3]
 gi|212554785|gb|ACJ27239.1| Diaminopimelate decarboxylase [Shewanella piezotolerans WP3]
          Length = 414

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 65/382 (17%), Positives = 114/382 (29%), Gaps = 23/382 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         N    +  A+K  +   + + L +   G    S  E
Sbjct: 26  GTPLYIYSRATLERHWYAFDNAVANHPHLICYAVKANSNIAVLNVLARLGSGFDIVSGGE 85

Query: 63  -VMLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
              +           ++   K       A+          + ++L +    AQ+++K   
Sbjct: 86  LARVIEAGGDPAKVVFSGVGKTVAEMELALEIGIYCFNVESAAELEQLSVVAQRMNKVAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNC--- 167
           + LRINP V              ++ G   ++         E     + G+  H      
Sbjct: 146 VSLRINPDVDAGTHPYISTGLKENKFGIAMEEAEAIFLRAKELPCIEIKGVDCHIGSQLT 205

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
           E K FL     +  +         +I+   +GGG+  T  D        +   L E    
Sbjct: 206 EIKPFLDAMDRMLALIDRLAELGIEIKHFDVGGGLGVTYDDELPPQPDVYAAALLERLGG 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQE---SAT 280
             +++  EPG AI  N     T VL + EN       VD ++   +   L          
Sbjct: 266 RDLKLIFEPGRAIAANAGIFVTQVLYLKENSDKRFALVDGAMNDLIRPSLYSAWQKIIPA 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
           I          V G  C  GD  G+      +  GD ++      Y     + +N     
Sbjct: 326 IDRGGETLNYDVVGPVCETGDFLGKDRQL-NIAAGDYLAIRSSGAYGFTMASNYNSRPRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDY 362
              + + D              
Sbjct: 385 AELMVDGDNAYVIREREKLAQL 406


>gi|154492269|ref|ZP_02031895.1| hypothetical protein PARMER_01903 [Parabacteroides merdae ATCC
           43184]
 gi|154087494|gb|EDN86539.1| hypothetical protein PARMER_01903 [Parabacteroides merdae ATCC
           43184]
          Length = 366

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 122/366 (33%), Positives = 187/366 (51%), Gaps = 9/366 (2%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE 68
           ++++ L  NL     +++ AGV ++LA K FA W  F  + +Y+  +T+SS +E  L  E
Sbjct: 1   MEEELLRRNLSLIKSVKERAGVNVILAFKAFAMWKAFPIVREYIPYSTASSKFEARLAFE 60

Query: 69  KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGLRINPSV 126
           + G   H Y+ AY + +   +L     + FN+++Q  +F     A       GLRINP  
Sbjct: 61  EMGSRAHTYSPAYTEADFPEILRYSSHVTFNSLTQFERFYPMVQADGNRVSCGLRINPEY 120

Query: 127 SYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF 186
           S  +  L +P  P SR+G             V GL FH  CE+ S+     + + +EK F
Sbjct: 121 SDVETDLYNPCAPGSRMGVVSDLLDGLLPDGVEGLHFHTLCESSSYDLEKTLGE-VEKRF 179

Query: 187 GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNTTTLN 245
           G F+  I+W+++GGG   T K Y  +     L+ F  KY   +I +EPG A    T  L 
Sbjct: 180 GRFLPHIKWLNMGGGHLMTRKGYDTEHLIGLLQAFKAKYPNLEIIMEPGSAFAWQTGFLL 239

Query: 246 TTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRSCLAG 300
           TTV+DI EN      I+D+S   H+PD L       I     P  G     + G SCL+G
Sbjct: 240 TTVVDIVENHGIKTAIIDASFTCHMPDCLEMPYKPVIRGAIEPEEGKPVYRIGGNSCLSG 299

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           D  G++ FE+P+K+GD++ FED+  Y I +   FNGI  P++A+ + +  +   +EF Y 
Sbjct: 300 DYMGDWFFEQPLKVGDKLIFEDMIHYTIVKTTMFNGIPHPSLALWSKEDRLVMYKEFGYE 359

Query: 361 DYYNNL 366
           DY   +
Sbjct: 360 DYKGRM 365


>gi|15891339|ref|NP_357011.1| diaminopimelate decarboxylase [Agrobacterium tumefaciens str. C58]
 gi|15159724|gb|AAK89796.1| diaminopimelate decarboxylase [Agrobacterium tumefaciens str. C58]
          Length = 422

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 61/389 (15%), Positives = 113/389 (29%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+     L  +         +    +  A+K  +   +  TL +   G    S  
Sbjct: 25  VGTPFYVYSTATLERHYKVFSGAFADVDAMVCYAMKANSNQAVLKTLAKLGAGIDVVSGG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E+              ++   K       A+ +        +  +L     +A K     
Sbjct: 85  ELRRALAAGVPASRIMFSGVGKTVAEMDYALEAGIYCFNIESEPELEVLNLRAVKAGKRA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
            +  RINP V           +  ++ G   +                V G+  H   + 
Sbjct: 145 HVSFRINPDVDARTHAKISTGKKENKFGISYERARAVYAHAATLPGIEVTGIDMHIGSQI 204

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221
                F    + +    +        I  + +GGG+    +D          +   +K  
Sbjct: 205 TELQPFEDAFRLLRELVEVLRTDGHAISHVDIGGGLGIPYRDDNNPPPLPDAYAHIVKNE 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278
            +  + +I  EPG  IV N   L T V+ + +   K  VIVD ++   +   L       
Sbjct: 265 LKSLNCKIVTEPGRLIVGNAGILVTEVIYVKDGGDKTFVIVDGAMNDLIRPTLYEAYHGI 324

Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                   N     A + G  C  GD           + GD I+      Y   +   +N
Sbjct: 325 RPVVQPSENAPRIKADIVGPVCETGDYLALDREMAAPQPGDLIAVSSAGAYGAVQAGTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    +   D         +Y +   
Sbjct: 385 SRLLVPEVLVKGDRFHVIRPRGTYEELIA 413


>gi|294671408|ref|ZP_06736257.1| hypothetical protein NEIELOOT_03116 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291306885|gb|EFE48128.1| hypothetical protein NEIELOOT_03116 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 406

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 60/385 (15%), Positives = 123/385 (31%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  + +L +               +  A+K      +     +   G    S  E
Sbjct: 18  GTPLYVYSQAELDSAFARYQTAFAALAPLICYAVKANGNLSVIRRFAELGSGFDIVSGGE 77

Query: 63  VMLGHEKFG-GETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +       G  +   ++   K          S        ++ +L++  + A +L     
Sbjct: 78  LARVLAAGGRADKTIFSGVGKSAAEIEFALKSGIKCFNVESLPELDRINEIAGRLKTAAP 137

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           + LRINP V              ++ G   +D   +          N+ G+  H   +  
Sbjct: 138 VSLRINPDVDAQTHPYISTGLKANKFGIAMEDAERAYLHAASLPHLNIIGIDCHIGSQLI 197

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                    +    +  +       ++ I LGGG+    ++     +  +   +++    
Sbjct: 198 KLEPLVEACERLLPLIDKLAAHGIGLQHIDLGGGVGIVYQNEETPDLAAYAAAVQKLLGG 257

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESAT--- 280
            S+++ LEPG ++V N   L T V  + +N  KN V+VD+++   +   L          
Sbjct: 258 RSLKLILEPGRSLVGNAGALLTRVEFVKQNGDKNFVVVDAAMNDLMRPALYQAYHHIENA 317

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
               + P+ A + G  C  GD   +       + GD +       Y  +    +N     
Sbjct: 318 EPSISAPFAADIVGPICETGDFLAKDRMIS-ARAGDLLVVRSAGAYASSMAGNYNTRPRA 376

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + N           +  +   N
Sbjct: 377 AEVLINGSEAKIVRHRETLEEMLAN 401


>gi|260583176|ref|ZP_05850956.1| diaminopimelate decarboxylase [Haemophilus influenzae NT127]
 gi|260093794|gb|EEW77702.1| diaminopimelate decarboxylase [Haemophilus influenzae NT127]
          Length = 415

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 60/384 (15%), Positives = 115/384 (29%), Gaps = 25/384 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +  G+ + + +   G    S  E
Sbjct: 26  DTPLYVYSRATLERHWHAFDSAFGKRPHLICFAVKSCSNIGVLNIMAKLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +              ++     ++  + A+          +VS+L      A        
Sbjct: 86  LERVLAAGGDASKVVFSGVAKSREEIMRALEVGIRCFNVESVSELKHINQIAGEMGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G    +  E            + G+  H   +  
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVNEAREVYKLASTLPNIKITGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F         + ++       ++ + LGGG+  T       +P       L++   
Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGLGVTYTDETPPHPSDYANALLEKLKN 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
              ++I LEPG AI  N   L   V  +     +N  I D+ +   +   L       I 
Sbjct: 266 YPELEIILEPGRAISANAGILVAKVQYLKSNESRNFAITDTGMNDMIRPALYEAYMNIIE 325

Query: 283 PNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +           V G  C   D  G+      +  GD I+      Y  +  + +N   
Sbjct: 326 IDRTLAREKAIYDVVGPVCETSDFLGKQRELS-IAEGDYIAQCSAGAYGASMSSNYNSRA 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362
                + + D +    R  +  + 
Sbjct: 385 RTAEVLVDGDQSYLIRRRETLQEL 408


>gi|163781655|ref|ZP_02176655.1| diaminopimelate decarboxylase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882875|gb|EDP76379.1| diaminopimelate decarboxylase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 422

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 57/381 (14%), Positives = 112/381 (29%), Gaps = 25/381 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+     +   +          G  +  A+K      +     +   G    S  E
Sbjct: 38  GTPLYVYSASYIRERIRAYQKAF--PGALVCYAVKANFNPEVVRVAGEEGAGADIVSGGE 95

Query: 63  VMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
           ++   +         Y    K      +    +       +  +L    + A +L K+  
Sbjct: 96  LVAALKGGIDPSRIVYAGVGKTVPELELAIEKEILMFNVESRDELYVLDEIAGRLGKRAR 155

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           +  R+NP V              S+ G   +   E            V G+  H   +  
Sbjct: 156 IAIRVNPDVDPKTHPYISTGMKKSKFGVDFETAREEYRLARELKNLEVVGIHCHIGSQLL 215

Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDF----CQRLKEFSE 223
               +   ++ + + +        +I ++ +GGG+    K    +       + +    E
Sbjct: 216 DVSPYREAVQKVVELYRDLTDEGFEINYLDIGGGLGIKYKPEDREPSPEELAREVLPLLE 275

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIY 282
             S QI LEPG +I  N   L   V  + +      I+ D+ +   V   +       + 
Sbjct: 276 GVSAQIILEPGRSITGNAGLLIAQVQFLKDKEIKHFIIVDAGMNDLVRPAIYDAYHHVVP 335

Query: 283 PNTGPYTA---MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
             +         + G  C  GD   +    + ++ GD I+      Y     + +N    
Sbjct: 336 VESKGREHIIADIVGPICETGDFLAKDRRIEFLERGDYIAVLSAGAYGFAMASHYNVRPR 395

Query: 340 PTIAVKNVDGTIKAIREFSYN 360
           P   +              YN
Sbjct: 396 PAEVLVENGSYRLIREREDYN 416


>gi|319781291|ref|YP_004140767.1| diaminopimelate decarboxylase [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317167179|gb|ADV10717.1| diaminopimelate decarboxylase [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 422

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 65/388 (16%), Positives = 119/388 (30%), Gaps = 26/388 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +              +  A+K  +   +  TL +   G    S  
Sbjct: 25  VGTPFYCYSTATLTRHYRVFAQSFAGLDTLVCYAMKANSNQAVLRTLAKLGAGADVVSEG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHK 116
           E+              ++   K       A+ +        +  +L     +  A     
Sbjct: 85  ELRRALAAGIPAGKILFSGVGKTAREMDFALAAGILCFNVESEPELELLSARAVALGKVA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            I LRINP V           +  ++ G   +   +   +        + G+  H   + 
Sbjct: 145 PISLRINPDVDARTHKKISTGKAENKFGIPWQRARQVYARAATLPGIRITGIDTHIGSQI 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221
                F      +             IE I LGGG+    +           + Q +++ 
Sbjct: 205 TELQPFDDAFALLVDLVGALRADGHAIEHIDLGGGLGIPYRVDNNPPPLPDAYAQIVRKH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
             K  +++  EPG  IV N   L + V+ + E + KN ++VD+++   +   L       
Sbjct: 265 VTKLGLKVMFEPGRLIVGNAGILVSEVIFVKEGDAKNFLVVDAAMNDLIRPTLYDAFHDI 324

Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                 P         V G  C  GD  G       +K GD I+      Y   +   +N
Sbjct: 325 RPVVQPPADTPRMMVDVVGPVCETGDYIGLDRDLPRLKAGDLIAVSTAGAYGAVQAGTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY 363
              +    + + D         +Y+D  
Sbjct: 385 TRLLVPEVLVDGDRFHVVRPRLTYDDLI 412


>gi|156105141|gb|ABU49109.1| diaminopimelate decarboxylase [Mesorhizobium ciceri]
          Length = 422

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 65/388 (16%), Positives = 119/388 (30%), Gaps = 26/388 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +              +  A+K  +   +  TL +   G    S  
Sbjct: 25  VGTPFYCYSTATLTRHYRVFAQSFAGLDTLVCYAMKANSNQAVLRTLAKLGAGADVVSEG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHK 116
           E+              ++   K       A+ +        +  +L     +  A     
Sbjct: 85  ELRRALAAGIPAGKILFSGVGKTAREMDFALAAGILCFNVESEPELELLSARAVALGKVA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            I LRINP V           +  ++ G   +   +   +        + G+  H   + 
Sbjct: 145 PISLRINPDVDARTHKKISTGKAENKFGIPWQRARQVYARAATLPGIRITGIDTHIGSQI 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221
                F      +             IE I LGGG+    +           + Q +++ 
Sbjct: 205 TELQPFDDAFALLVDLVGALRADGHAIEHIDLGGGLGIPYRVDNNPPPLPDAYAQIVRKH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
             K  +++  EPG  IV N   L + V+ + E + KN ++VD+++   +   L       
Sbjct: 265 VTKLGLKVMFEPGRLIVGNAGILVSEVIFVKEGDAKNFLVVDAAMNDLIRPTLYDAFHDI 324

Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                 P         V G  C  GD  G       +K GD I+      Y   +   +N
Sbjct: 325 RPVVQPPADTPRMMVDVVGPVCETGDYIGLDRDLPRLKAGDLIAVSTAGAYGAVQAGTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY 363
              +    + + D         +Y+D  
Sbjct: 385 TRLLVPEVLVDGDRFHVVRPRLTYDDLI 412


>gi|145637736|ref|ZP_01793388.1| diaminopimelate decarboxylase [Haemophilus influenzae PittHH]
 gi|145269085|gb|EDK09036.1| diaminopimelate decarboxylase [Haemophilus influenzae PittHH]
          Length = 415

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 59/384 (15%), Positives = 115/384 (29%), Gaps = 25/384 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +  G+ + + +   G    S  E
Sbjct: 26  GTPLYVYSRATLERHWHAFDSAFGKHPHLICFAVKSCSNIGVLNIMAKLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +              ++     ++  + A+          +VS+L      A        
Sbjct: 86  LERVLAAGGDASKVVFSGVAKSREEIMRALEVGIRCFNVESVSELKHINQIAGEMGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G    +  E            + G+  H   +  
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVDEAREVYKLASTLPNIKITGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F         + ++       ++ + LGGG+  T       +P       L++   
Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGLGVTYTDETPPHPSDYANALLEKLKN 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
              ++I LEPG AI  N   L   V  +     +N  I D+ +   +   L       + 
Sbjct: 266 YPELEIILEPGRAISANAGILVAKVQYLKSNESRNFAITDTGMNDMIRPALYEAYMNIVE 325

Query: 283 PNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +           V G  C   D  G+      +  GD I+      Y  +  + +N   
Sbjct: 326 IDRTLEREKTIYDVVGPVCETSDFLGKQRELS-IAEGDYIAQCSAGAYGASMSSNYNSRA 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362
                + + D +    R  +  + 
Sbjct: 385 RTAEVLVDRDKSYLIRRRETLQEL 408


>gi|330444897|ref|ZP_08308552.1| diaminopimelate decarboxylase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328489207|dbj|GAA03049.1| diaminopimelate decarboxylase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 416

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 63/383 (16%), Positives = 111/383 (28%), Gaps = 24/383 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +  G+ + L +   G    S  E
Sbjct: 27  GTPLYVYSRATLERHWKAFDEAVATQPHLICYAVKANSNLGVLNVLARLGSGFDIVSQGE 86

Query: 63  V-MLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +  +           ++   K       A+          +  +L +    A++L     
Sbjct: 87  LERVIAAGGDPAKVVFSGVGKTSAEMKRALELGIKCFNVESEPELERLNLVAEQLGVIAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNC--- 167
           I LRINP V              ++ G   +  +E            V G+  H      
Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGIAFERAVEVYRLAHSLPHLKVVGMDCHIGSQLT 206

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
           E   F+  +  L  +  E       IE + LGGG+  T  D          K    +   
Sbjct: 207 EITPFIDATDRLLALVDELKAEGIAIEHLDLGGGLGVTYSDEQPPLPADYAKALLGRLES 266

Query: 228 ----QIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279
               ++  EPG AI  N   L T V  +         IVD+++   +   L         
Sbjct: 267 YPELELIFEPGRAIAANAGVLLTKVEFLKHTEHKNFAIVDAAMNDLIRPTLYSAWQDIVP 326

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       + G  C  GD  G+      +  GD ++      Y     + +N    
Sbjct: 327 VTPRQGEAQVYDLVGPICETGDFIGKDRSLC-LAQGDLLAVRSAGAYGFVMASNYNTRAR 385

Query: 340 PTIAVKNVDGTIKAIREFSYNDY 362
               + + +         +    
Sbjct: 386 AAEVIVDGEQVHLVRERETLAQL 408


>gi|68249326|ref|YP_248438.1| diaminopimelate decarboxylase [Haemophilus influenzae 86-028NP]
 gi|68057525|gb|AAX87778.1| diaminopimelate decarboxylase [Haemophilus influenzae 86-028NP]
          Length = 415

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 59/384 (15%), Positives = 115/384 (29%), Gaps = 25/384 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +  G+ + + +   G    S  E
Sbjct: 26  GTPLYVYSRATLERHWHAFDSAFGKRPHLICFAVKSCSNIGVLNIMAKLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +              ++     ++  + A+          +VS+L      A        
Sbjct: 86  LERVLAAGGDASKVVFSGVAKSREEIMRALEVGIRCFNVESVSELKHINQIAGEMGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G    +  E            + G+  H   +  
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVNEAREVYKLASTLPNIKITGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F         + ++       ++ + LGGG+  T       +P       L++   
Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGLGVTYTDETPPHPSDYANALLEKLKN 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
              ++I LEPG AI  N   L   V  +     +N  I D+ +   +   L       + 
Sbjct: 266 YPELEIILEPGRAISANAGILVAKVQYLKSNESRNFAITDTGMNDMIRPALYEAYMNIVE 325

Query: 283 PNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +           V G  C   D  G+      +  GD I+      Y  +  + +N   
Sbjct: 326 IDRTLEREKAIYDVVGPVCETSDFLGKQRELS-IAEGDYIAQCSAGAYGASMSSNYNSRA 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362
                + + D +    R  +  + 
Sbjct: 385 RTAEVLVDGDQSYLIRRRETLQEL 408


>gi|289578961|ref|YP_003477588.1| diaminopimelate decarboxylase [Thermoanaerobacter italicus Ab9]
 gi|289528674|gb|ADD03026.1| diaminopimelate decarboxylase [Thermoanaerobacter italicus Ab9]
          Length = 445

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 71/400 (17%), Positives = 135/400 (33%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ID++ L  N        K    G +++ A K F    +   + +   G    S 
Sbjct: 29  GTPLYVIDEELLRQNCRAFYNGFKKDYPGNEVIYASKAFMTMAICKIIEEEKLGLDVVSG 88

Query: 61  YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH-- 115
            E+       F  E   ++     ++  I A+ +N   II +   +LN   D A+K++  
Sbjct: 89  GELYTALKAGFPAEKIYFHGNNKSREELIMALENNIGRIIVDNWYELNMLNDLAKKMNKV 148

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
             I +RI+P V           +  S+ G            +  +  E  N+ GL  H  
Sbjct: 149 PNIYIRISPGVEAHTHQYVKTGQIDSKFGFPLFNGDAIKAIEYALTLENVNLVGLHSHIG 208

Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            +      + A ++ +             ++  + LGGG      +       +++    
Sbjct: 209 SQIFDAESYKAEIEIMMNFLKLLKEFLGWEVGELDLGGGFGIAYVEEDDPQPIEQIASEI 268

Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            +               I +EPG +I+ N  T   TV  I +       V     +  ++
Sbjct: 269 MQAVKEYSVALNIKMPNIIVEPGRSIIGNAGTTLYTVGAIKDIPGVRKYVAVDGGMSDNI 328

Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   I  N           + G+ C +GD+         ++ GD ++      
Sbjct: 329 RTALYGAKYDAIVANKAKNIKSEKVSIAGKLCESGDMLIWDITLPKIEEGDILAVTCTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           YN +  + +N +  P   +         +   +Y D   N
Sbjct: 389 YNYSMASNYNRLPRPAAVLVYNGQADIIVARETYEDLIRN 428


>gi|319775330|ref|YP_004137818.1| diaminopimelate decarboxylase, PLP-binding [Haemophilus influenzae
           F3047]
 gi|329122674|ref|ZP_08251252.1| diaminopimelate decarboxylase [Haemophilus aegyptius ATCC 11116]
 gi|317449921|emb|CBY86133.1| diaminopimelate decarboxylase, PLP-binding [Haemophilus influenzae
           F3047]
 gi|327472548|gb|EGF17978.1| diaminopimelate decarboxylase [Haemophilus aegyptius ATCC 11116]
          Length = 415

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 59/384 (15%), Positives = 115/384 (29%), Gaps = 25/384 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +  G+ + + +   G    S  E
Sbjct: 26  GTPLYVYSRATLERHWHAFDSAFGKRPHLICFAVKSCSNIGVLNIMAKLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +              ++     ++  + A+          +VS+L      A        
Sbjct: 86  LERVLAAGGDASKVVFSGVAKSREEIMRALEVGIRCFNVESVSELKHINQIAGEMGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G    +  E            + G+  H   +  
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVNEAREVYKLASTLPNIKITGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F         + ++       ++ + LGGG+  T       +P       L++   
Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGLGVTYTDETPPHPSDYANALLEKLKN 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
              ++I LEPG AI  N   L   V  +     +N  I D+ +   +   L       + 
Sbjct: 266 YPELEIILEPGRAISANAGILVAKVQYLKSNESRNFAITDTGMNDMIRPALYEAYMNIVE 325

Query: 283 PNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +           V G  C   D  G+      +  GD I+      Y  +  + +N   
Sbjct: 326 IDRTLEREKAIYDVVGPVCETSDFLGKQRELS-IAEGDYIAQCSAGAYGASMSSNYNSRA 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362
                + + D +    R  +  + 
Sbjct: 385 RTAEVLVDGDQSYLIRRRETLQEL 408


>gi|313683044|ref|YP_004060782.1| diaminopimelate decarboxylase [Sulfuricurvum kujiense DSM 16994]
 gi|313155904|gb|ADR34582.1| diaminopimelate decarboxylase [Sulfuricurvum kujiense DSM 16994]
          Length = 400

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 60/383 (15%), Positives = 123/383 (32%), Gaps = 21/383 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D  K+    ++     +     L  A+K  +   +     Q   G    S+ E
Sbjct: 12  GTPLYVYDFDKMKTQFESLKEAFRGRKSILAYAVKANSNLSVVKHFAQLGSGADCVSIGE 71

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
           V              ++   K  +        D   I   + ++L + +  A++L  K  
Sbjct: 72  VRRALMAGVPKYRIIFSGVGKRDDEIREAIESDILYINVESEAELGRVEMIARELGAKAR 131

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENK 170
           +  R+NP++              ++ G +             S+  +  G+ FH   +  
Sbjct: 132 ISIRVNPNIDPKTHPYISTGLHDNKFGVEIVAAKRMYIQAKNSDHLDPVGIHFHIGSQLT 191

Query: 171 SFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP---VKDFCQRLKEFSEK 224
                     ++ ++ +       ++++  +GGG+     +       D+ Q +    + 
Sbjct: 192 ELEPIYEAAVIVADLLRSLQAIDIELKFFDIGGGLGVRYDNETTIEPYDYAQAILSALKG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLL--YQESATI 281
             V I  EPG  +  N     T VL   +   K  V+VD ++   +   L   Y     +
Sbjct: 252 IDVTIICEPGRFLTANAGYFLTKVLYEKNNGAKRFVMVDGAMNDLIRPSLYKAYHRIEAL 311

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
             +     A V G  C +GD   + +   P++  D +       Y     + +N      
Sbjct: 312 DKSGEESIADVVGPVCESGDFLAKNYPLPPMEHNDLLVIHSAGAYGFGMGSNYNTRGRSA 371

Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364
                        R  ++ D   
Sbjct: 372 EIAVEGANVRLIRRRENFEDVIA 394


>gi|217077393|ref|YP_002335111.1| diaminopimelate decarboxylase [Thermosipho africanus TCF52B]
 gi|217037248|gb|ACJ75770.1| diaminopimelate decarboxylase [Thermosipho africanus TCF52B]
          Length = 384

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 67/374 (17%), Positives = 129/374 (34%), Gaps = 14/374 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y+  ++ L   ++    + +        A K      +   L  +  G       
Sbjct: 12  IGTPVYIYFEKILEERINKVKNVFEEINFFPTFAAKANNNPAILKILKNHGFGVDILGEG 71

Query: 62  EVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E++        G+   +N   K  + +          +  ++  +         +   ++
Sbjct: 72  ELLACKIASIEGDKIVWNGNGKTKEQKDLMKEYKVKYVNVDSKEEFENLWK--NEDDFEL 129

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-KNVNGLMFHNNCENKSFLCFSA 177
            LR+NP +               + G   K   E    + ++G+  H   +      F  
Sbjct: 130 FLRVNPDIDAKTHPYISTGLKKHKFGVDFKTAEEILKSQKISGVHIHIGSQITDVKPFKE 189

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE--KYSVQIYLEPGE 235
            ++   K    +   IE I++GGG     KD    +  +  +E     K    +  E G 
Sbjct: 190 AIEKTLKLCQKY--NIEKINIGGGWGIKYKDENELNTQEYKEEIIPLLKNFKLVINELGR 247

Query: 236 AIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLL--YQESATIYPNTGPYTAMV 292
            I+     L T V  I +  K   +  +S +   +   L   Y E   +  +     A V
Sbjct: 248 FIIAPAGFLLTRVTLIKKTEKKFFVVTESGMNHLLRPALYNAYHEIEVLNNSKDEILADV 307

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352
            G  C +GD   +    K  +IG+ +  ++   Y  +  N +NG   P   +   DG IK
Sbjct: 308 VGPLCESGDFLAKERKIKKPEIGELLVIKNAGAYGFSMANNYNGTVRPAEVLITKDGKIK 367

Query: 353 AIR-EFSYNDYYNN 365
            IR   ++++ + N
Sbjct: 368 LIRKRETFDELFKN 381


>gi|326574794|gb|EGE24728.1| diaminopimelate decarboxylase [Moraxella catarrhalis O35E]
          Length = 435

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 67/381 (17%), Positives = 128/381 (33%), Gaps = 22/381 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y   ++ LL N  +          ++  A+K  +   +  TL +   G    S  E
Sbjct: 50  GTPLYAYSQRALLENYQSYTDAFDTIDHQICYAVKANSNLAILKTLAKAGAGFDIVSKGE 109

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG- 119
           +    +    +   Y+   K  +        D       ++S+L+   + A + ++    
Sbjct: 110 LARVLQVADAKKVVYSGVGKTADDIEYALKADIHCFNVESLSELDTINEVAGRQNQIARI 169

Query: 120 -LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKS 171
            LRINP V              ++ G   +  + + +         + G+  H   +   
Sbjct: 170 SLRINPDVDAKTHPYISTGMKDNKFGISHEQAVAAYVYAHHLPNLKIVGIDCHIGSQLLD 229

Query: 172 FLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEKY 225
              FS  L  + +          +++ I LGGG+     D            L    ++ 
Sbjct: 230 TDGFSDALDKLIELIDTLTDKGIKLQHIDLGGGLGVRYIDENPVSIDQVATVLLPRLKQL 289

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLL---YQESATI 281
            +++YLEPG ++V N   L TTV  +         IVD+S+   +   L           
Sbjct: 290 GLKLYLEPGRSLVANAGVLLTTVDVLKPTEFKNFAIVDASMSELIRPALYESQMAIIPAK 349

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                  T  V G  C + D  G+      +++GD ++      Y  +    +N    P 
Sbjct: 350 LSRDTAKTWDVVGTVCESSDFLGKDRILS-LQVGDTLAVTGAGAYGFSMACNYNTRPRPC 408

Query: 342 IAVKNVDGTIKAIREFSYNDY 362
             + N        +  + +D 
Sbjct: 409 EVMVNHGTHRLIRKREALDDL 429


>gi|254483250|ref|ZP_05096482.1| diaminopimelate decarboxylase [marine gamma proteobacterium
           HTCC2148]
 gi|214036473|gb|EEB77148.1| diaminopimelate decarboxylase [marine gamma proteobacterium
           HTCC2148]
          Length = 416

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 61/385 (15%), Positives = 113/385 (29%), Gaps = 24/385 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L                 +  A+K  +   + DTL +   G    S  E
Sbjct: 26  GTPCYIYSRAGLEGAFRQYQDALAGCEHLVCYAVKANSNLAVLDTLARLGAGFDIVSAGE 85

Query: 63  V-MLGHEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +  +           ++      D    A+  +       + ++L      A    K   
Sbjct: 86  LHRVIAAGGDPGKVVFSGVGKKPDEMAQALELDIACFNLESAAELEVLAGVAAHAGKTAR 145

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
             +R+NP V              ++ G   ++ +    +        V G+  H   +  
Sbjct: 146 VSVRVNPDVDAQTHPYISTGLRENKFGVTMEEALLVYQRAAKLPNIEVVGVDCHIGSQLT 205

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC---QRLKEFSEK 224
               F   LK    +  E       +  + LGGG+    KD            ++E    
Sbjct: 206 QISPFIDALKRLLALIDELAEQGIVLRHLDLGGGLGVCYKDEEPPSIAQYVAAVREELGD 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATIYP 283
             +Q+  EPG +I  N   L TTV  +     +    VD+++   +   L          
Sbjct: 266 RPLQLVFEPGRSIAANAGLLLTTVEYLKTTPDHNFALVDAAMNDMIRPALYQAWLDIRNT 325

Query: 284 NTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                    +  V G  C  GD  G+      ++ GD ++      Y     + +N    
Sbjct: 326 RENNVGQSASWDVVGPVCETGDFLGKQRQLS-LQQGDLLALFGAGAYGFTMSSNYNSRPR 384

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
               + + +         S  D   
Sbjct: 385 AAEVMVDGEKVHLVRERESIADIIR 409


>gi|73542823|ref|YP_297343.1| diaminopimelate decarboxylase [Ralstonia eutropha JMP134]
 gi|72120236|gb|AAZ62499.1| diaminopimelate decarboxylase [Ralstonia eutropha JMP134]
          Length = 419

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 54/387 (13%), Positives = 111/387 (28%), Gaps = 26/387 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L           K    ++  A+K  +   +     +   G    S  E
Sbjct: 27  GTPAYVYSRAALTAAYQGYAAACKGRKAQVQYAMKANSNLAVLQVFAKLGAGFDIVSGGE 86

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++           A+  +       ++ +L++    A ++ K+  
Sbjct: 87  LKRVLAAGGDPRKVVFSGVGKNAAEMELALAHDVRCFNVESIPELDRLNAVAGQIGKRAR 146

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
             LRINP V              ++ G   +D + +           V G+  H   +  
Sbjct: 147 VSLRINPDVDAKTHPYISTGLKGNKFGIAFEDVLPTYRAAAALPNIEVTGIDCHIGSQIT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               +   L    ++ +        +E I +GGG+  T  D    D         ++   
Sbjct: 207 EVAPYLEALDKVLDVVEALEREGIVLEHIDVGGGLGITYTDETPPDITGFATTLLDRVAA 266

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES-- 278
                 ++  EPG ++V N   L T V  +         + D+++       +       
Sbjct: 267 RGHAHREVLFEPGRSLVGNAGVLLTQVEFLKPGAAKNFCIVDAAMNDLARPAMYEAYHRI 326

Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                         + G  C +GD  G       V+ GD ++      Y     + +N  
Sbjct: 327 EPVKANGGSQVVYDIVGPVCESGDWLGRDRALA-VQPGDLLAVMSAGAYGFVMSSNYNTR 385

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
                 + +              D + 
Sbjct: 386 PRAAEVMVDGGKVHLVRERELVEDLFR 412


>gi|149181673|ref|ZP_01860166.1| diaminopimelate decarboxylase [Bacillus sp. SG-1]
 gi|148850651|gb|EDL64808.1| diaminopimelate decarboxylase [Bacillus sp. SG-1]
          Length = 435

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 67/399 (16%), Positives = 133/399 (33%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D + +           +N G   ++  A K F++  +F  +N+        S 
Sbjct: 30  GTPLYIYDVELIRERARGFKNTFENLGIKAQVAYASKAFSSVAIFQLMNEEGLSLDVVSG 89

Query: 61  YEVMLG-HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E   ++     ++    A+  N   I+ +   +L   +D  + + + 
Sbjct: 90  GELFTAVKAGFPAERIHFHGNNKSEEELRMALEHNIGCIVVDNFYELQLLEDVCKDMGQS 149

Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           +   +R+ P +           +  S+ G         E     ++S   NV GL  H  
Sbjct: 150 MDILIRVTPGIEAHTHDYILTGQEDSKFGFGLENGQTEEALLRGVKSAHLNVLGLHCHIG 209

Query: 167 CENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK--------DF 214
            +      F      ++  +           E ++LGGG                   + 
Sbjct: 210 SQIFETTGFVLAASKIIGKLADWKDKHGYVAEVLNLGGGFGIRYTAEDDPIAPSQYVEEI 269

Query: 215 CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269
              +K+ +E++     +I++EPG ++V +  T   +V    E         VD  +  ++
Sbjct: 270 ISEVKKKAEEFNLDMPEIWIEPGRSLVGDAGTTLYSVGSAKEVPNIRKYLAVDGGMSDNI 329

Query: 270 PDYLLYQESATIYPNTGPYTAM----VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   I  N           + G+ C +GD+            GD ++      
Sbjct: 330 RPALYEAKYEAILANKAGQPVHETVSIAGKCCESGDMLIWDLPLPESSQGDILAVFCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  N +N I  P +       T   +R  S+ D   
Sbjct: 390 YGYSMANNYNRIPRPPVVFVENGKTKLVVRRESFEDLLK 428


>gi|192293581|ref|YP_001994186.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris TIE-1]
 gi|192287330|gb|ACF03711.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris TIE-1]
          Length = 421

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 56/389 (14%), Positives = 105/389 (26%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +              +  A+K  +   +  TL +   G    S  
Sbjct: 25  VGTPFYCYSSATLERHYRVFTEAFAGLDALVCYAMKANSNQSVLRTLAKLGAGADVVSGG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118
           E+              ++   K           D   +   +  +L +    A +  +  
Sbjct: 85  ELQRALAAGIPPSKIVFSGVGKTEAELRAALAHDIKCLNVESEPELEQLSRIAVETGRTA 144

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
              LR+NP V           +  ++ G   +   E   +        V G+  H   + 
Sbjct: 145 RISLRVNPDVDSGTHAKISTGKSENKFGIPIRHAREVYARAAKLPGIQVTGVDVHIGSQI 204

Query: 170 KSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEF 221
                       +             +  +  GGG+     +          + + +K  
Sbjct: 205 VDLAPMEAAFRKVAEFIHVLRGDGHTVSHVDFGGGLGIPYYEDRDAPPEPFAYAEMVKRV 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
           +      +  EPG  IV N   L   V+ +   + K  VI+D+++   +   L       
Sbjct: 265 THNLGCTLLFEPGRMIVGNAGILVAKVIYVKHGDGKTFVIIDAAMNDLIRPTLYEAYHEI 324

Query: 281 IYPNT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           I             A V G  C  GD          +K GD I+      Y   +   +N
Sbjct: 325 IAVQQPAPGVATMVADVVGPVCETGDYLALDRKLPELKAGDLIAIMTAGAYGAVQACTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    +   D                
Sbjct: 385 TRALVPEVLVKDDQVAVVRPRIEVEQLIA 413


>gi|27366317|ref|NP_761845.1| carboxynorspermidine decarboxylase [Vibrio vulnificus CMCP6]
 gi|320156826|ref|YP_004189205.1| carboxynorspermidine decarboxylase [Vibrio vulnificus MO6-24/O]
 gi|27362518|gb|AAO11372.1| carboxynorspermidine decarboxylase [Vibrio vulnificus CMCP6]
 gi|319932138|gb|ADV87002.1| carboxynorspermidine decarboxylase putative [Vibrio vulnificus
           MO6-24/O]
          Length = 377

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 168/368 (45%), Positives = 242/368 (65%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTP+++ID+ KL+ NL+ A  +++ +GVKL+LALKCF+ WG+FD +  Y+DGTTSS  +
Sbjct: 6   LKTPFFMIDEAKLIQNLEIAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG+EKFGGETHAY+V Y + ++  V   CD IIFN+ SQL   +   +     IGLR
Sbjct: 66  EVKLGYEKFGGETHAYSVGYSEDDVREVADLCDKIIFNSQSQLAAHRHIVEGKA-SIGLR 124

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP VSY+   LA+P R FSRLG +      +   ++NG+MFH NCENK    F A+L +
Sbjct: 125 LNPGVSYASQDLANPARQFSRLGVQADHIDPAVFDSINGVMFHMNCENKDVDAFIALLDS 184

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I + FG ++ +++W+S+GGG+ FT   Y V+     LK FSEK+ VQ+YLEPGEAI+T T
Sbjct: 185 ISERFGAYLNKLDWVSMGGGVFFTWPGYDVEKLGLALKAFSEKHGVQMYLEPGEAIITKT 244

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299
           T L  TV+D+ EN     IVDS+ EAH  D L+Y+E A++      G +  ++   SCLA
Sbjct: 245 TDLVVTVVDLVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASENGEHEYVIGSCSCLA 304

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F    F++P+ +G R+   D AGY + + NWFNG+ MP++  +  +G I+ + EF Y
Sbjct: 305 GDQFCVAKFDQPLHVGQRLHILDSAGYTMVKLNWFNGLKMPSVYCERTNGEIQKLNEFGY 364

Query: 360 NDYYNNLS 367
            D+  +LS
Sbjct: 365 EDFKRSLS 372


>gi|319791909|ref|YP_004153549.1| diaminopimelate decarboxylase [Variovorax paradoxus EPS]
 gi|315594372|gb|ADU35438.1| diaminopimelate decarboxylase [Variovorax paradoxus EPS]
          Length = 422

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 55/388 (14%), Positives = 114/388 (29%), Gaps = 26/388 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++  KQ +L+ L       +     +  A+K  ++ G+     +   G    S  E
Sbjct: 33  GTPLFVYSKQWMLDALAAYQRGFEGRDALICYAMKANSSLGVLRVFAEAGCGFDIVSGGE 92

Query: 63  VMLGHE-KFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +          +   ++   K       A+ +        + ++L+   + A        
Sbjct: 93  LARVLAVGADPKKIIFSGVGKTRAEMRQALAAGIACFNVESEAELDVLNEVALAEGGRAP 152

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           I +RINP+V              ++ G      +E+           V G+  H   +  
Sbjct: 153 ISIRINPNVDPKTHPYISTGLKGNKFGIAHDRAVEAYRHAARLPGLEVVGIDCHIGSQIT 212

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS- 226
               +        ++ +        I  +  GGG+                ++   K   
Sbjct: 213 EASPYLDACDRILDLVEAIEAAGVPIHHLDFGGGLGIDYNGEVPPKADDLWQQLLAKLDA 272

Query: 227 -----VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES-- 278
                 ++ +EPG ++V N     T VL           + D+++       +       
Sbjct: 273 RGFGARKLVIEPGRSLVGNAGVCVTEVLYTKPGEDKNFCIVDAAMNDLPRPAMYQAFQKI 332

Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                      T  V G  C +GD  G       +  GD ++      Y ++  + +N  
Sbjct: 333 VPLRIRTGEAPTYDVVGPVCESGDWIGRDRALNVL-AGDLLAVLSAGAYCMSMSSNYNTR 391

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYNN 365
                 + +        R  +  D   N
Sbjct: 392 PRAAEVLVSGQSATLIRRRETMEDQLRN 419


>gi|145630464|ref|ZP_01786244.1| diaminopimelate decarboxylase [Haemophilus influenzae R3021]
 gi|144983854|gb|EDJ91296.1| diaminopimelate decarboxylase [Haemophilus influenzae R3021]
          Length = 415

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 59/384 (15%), Positives = 115/384 (29%), Gaps = 25/384 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +  G+ + + +   G    S  E
Sbjct: 26  DTPLYVYSRATLERHWHAFDSAFGKRPHLICFAVKSCSNIGVLNIMAKLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +              ++     ++  + A+          +VS+L      A        
Sbjct: 86  LERVLAAGGDASKVVFSGVAKSREEIMRALEVGIRCFNVESVSELKHINQIAGEMGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G    +  E            + G+  H   +  
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVNEAREVYKLASTLPNIKITGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F         + ++       ++ + LGGG+  T       +P       L++   
Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGLGVTYTDETPPHPSDYANALLEKLKN 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
              ++I LEPG AI  N   L   V  +     +N  I D+ +   +   L       + 
Sbjct: 266 YPELEIILEPGRAISANAGILVAKVQYLKSNESRNFAITDTGMNDMIRPALYEAYMNIVE 325

Query: 283 PNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +           V G  C   D  G+      +  GD I+      Y  +  + +N   
Sbjct: 326 IDRTLEREKAIYDVVGPVCETSDFLGKQRELS-IAEGDYIAQCSAGAYGASMSSNYNSRA 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362
                + + D +    R  +  + 
Sbjct: 385 RTAEVLVDRDKSYLIRRRETLQEL 408


>gi|297529532|ref|YP_003670807.1| diaminopimelate decarboxylase [Geobacillus sp. C56-T3]
 gi|297252784|gb|ADI26230.1| diaminopimelate decarboxylase [Geobacillus sp. C56-T3]
          Length = 439

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 59/399 (14%), Positives = 121/399 (30%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   +           +  GV+  +  A K F+A  +     +        S 
Sbjct: 30  GTPLYIYDVALIRARARAFKEAFQRHGVRAQVAYASKAFSAVAIVQLAAEEGLSLDVVSG 89

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK--LH 115
            E+       F  E   ++   K  +  A+        I+ +   +L   ++ A+     
Sbjct: 90  GELYTALAAGFPPERIHFHGNNKSRDELAMALEHGIGCIVADNFYELELIEELAESSGRT 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             + LR+ P V           +  S+ G         E  +  + S    + G+  H  
Sbjct: 150 VPVLLRVTPGVEAHTHDYILTGQEDSKFGFDLNNGQADEAFRRVMASAAFQLLGVHCHIG 209

Query: 167 CENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC------- 215
            +      F      +   + +           ++LGGG      +              
Sbjct: 210 SQIFETAGFVLAAQKVFAKLAEWNKAHGFVPAVVNLGGGFGIRYTEEDDPIPVTAYVDCI 269

Query: 216 -QRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            + +K  +E       +I++EPG ++V +  T   T+    E       +     +  ++
Sbjct: 270 VEEVKRQAEACRLPLPEIWIEPGRSLVGDAGTTIYTIGSRKEVPNVRTYIAVDGGMSDNI 329

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +     A            + G+ C +GD+          K GD ++      
Sbjct: 330 RPALYGAKYEAALANRVFGEPTEVVSIAGKCCESGDMLIWDIALPEAKPGDYLAVFCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  N +N +  P +           ++  +Y D   
Sbjct: 390 YGYSMANNYNRLPRPAVVFVENGDAQLVVKRETYEDLIQ 428


>gi|261417864|ref|YP_003251546.1| diaminopimelate decarboxylase [Geobacillus sp. Y412MC61]
 gi|319767324|ref|YP_004132825.1| diaminopimelate decarboxylase [Geobacillus sp. Y412MC52]
 gi|261374321|gb|ACX77064.1| diaminopimelate decarboxylase [Geobacillus sp. Y412MC61]
 gi|317112190|gb|ADU94682.1| diaminopimelate decarboxylase [Geobacillus sp. Y412MC52]
          Length = 439

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 59/399 (14%), Positives = 121/399 (30%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   +           +  GV+  +  A K F+A  +     +        S 
Sbjct: 30  GTPLYIYDVALIRARARAFKEAFQRHGVRAQVAYASKAFSAVAIVQLAAEEGLSLDVVSG 89

Query: 61  YEVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115
            E+       F  E   ++     +D    A+      I+ +   +L   ++ A+     
Sbjct: 90  GELYTALAAGFPPERIHFHGNNKSRDELAMALEHGIGCIVADNFYELELIEELAESSGRT 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             + LR+ P V           +  S+ G         E  +  + S    + G+  H  
Sbjct: 150 VPVLLRVTPGVEAHTHDYILTGQEDSKFGFDLNNGQADEAFRRVMASAAFQLLGVHCHIG 209

Query: 167 CENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC------- 215
            +      F      +   + +           ++LGGG      +              
Sbjct: 210 SQIFETAGFVLAAQKVFAKLAEWNKAHGFVPAVVNLGGGFGIRYTEEDDPIPVTAYVDCI 269

Query: 216 -QRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            + +K  +E       +I++EPG ++V +  T   T+    E       +     +  ++
Sbjct: 270 VEEVKRQAEACRLPLPEIWIEPGRSLVGDAGTTIYTIGSRKEVPNVRTYIAVDGGMSDNI 329

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +     A            + G+ C +GD+          K GD ++      
Sbjct: 330 RPALYGAKYEAALANRVFGEPTEVVSIAGKCCESGDMLIWDIALPEAKPGDYLAVFCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  N +N +  P +           ++  +Y D   
Sbjct: 390 YGYSMANNYNRLPRPAVVFVENGDAQLVVKRETYEDLIQ 428


>gi|254515502|ref|ZP_05127562.1| diaminopimelate decarboxylase [gamma proteobacterium NOR5-3]
 gi|219675224|gb|EED31590.1| diaminopimelate decarboxylase [gamma proteobacterium NOR5-3]
          Length = 414

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 61/384 (15%), Positives = 115/384 (29%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  ++ + + L+      K     +  A+K  +   + D L +   G    S+ E
Sbjct: 25  GTPCYVYSRKAMESALEEYHKALKGCEHLVCYAVKANSNIAVLDILARCGAGFDIVSVGE 84

Query: 63  V-MLGHEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +  +           ++      D    A+          + ++L   +  A +L     
Sbjct: 85  LERVIAAGGDPGKVVFSGVVKRPDEMRRALQVGIRCFNVESEAELEVLQAVAAQLQVQAP 144

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE-- 168
           + +R+NP V              ++ G          +        +V GL  H   +  
Sbjct: 145 VSVRVNPDVDAGTHPYISTGLRENKFGVATDAAMALLRRAKTLSNIDVTGLDCHIGSQLI 204

Query: 169 -NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---KEFSEK 224
                L     L  +          I  + LGGGI    +D         +   +E    
Sbjct: 205 DMSPLLDALQQLLLMVDTLEAEGIHIRHLDLGGGIGVRYRDEQPPAVADYIAAVREALGD 264

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQE---SAT 280
             + +  EPG +IV N   L T V  + E   +    VD+++   +   L         T
Sbjct: 265 RDLALVFEPGRSIVANAGVLLTRVHYLKETDAHSFALVDAAMNDFIRPALYQAWVDIQPT 324

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              +  P    V G  C  GD  G+      +     ++      Y     + +N     
Sbjct: 325 GPSDAEPRLWNVVGPVCETGDFLGKDRELA-IAPDTLLAIHGAGAYGFVMSSNYNTRPRA 383

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + + D         +  D   
Sbjct: 384 AEVMIDGDSAHLIRERETIEDLLR 407


>gi|226938955|ref|YP_002794026.1| DcdA [Laribacter hongkongensis HLHK9]
 gi|226713879|gb|ACO73017.1| DcdA [Laribacter hongkongensis HLHK9]
          Length = 417

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 57/387 (14%), Positives = 119/387 (30%), Gaps = 25/387 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L                 +  ALK  +   +         G  + S+ E
Sbjct: 26  GTPCYVYAESALTQAYSAYSNAFAGMPHLVCYALKANSNLSVIRHFASLGAGFDTVSIGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++   K       A+          +V++L +    A++L     
Sbjct: 86  IERVLAAGGEAGKIVFSGVGKSAAEMRRALEIGIHCFNVESVNELERLDTVARELGKRAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGE-------KCKDKIESEIKNVNGLMFHNNCE-- 168
           + LRINP+V              ++ G          +   E    +V G+  H   +  
Sbjct: 146 VSLRINPNVDARTHPYISTGLKNNKFGIAYDIARQSYRRAAELPNLDVIGIDCHIGSQLT 205

Query: 169 -NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
            +   +     L  +  +      ++  + +GGG+     D     ++ +   ++E    
Sbjct: 206 DSTPLIDALDRLLVLVDQLSEDGIRLRHVDIGGGLGIRYADETPPDLQQYADAIRERLAG 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + + +EPG ++V N   L T V  + E + K+  +VD+++   +              
Sbjct: 266 RDLALLMEPGRSLVGNAGVLLTRVEYLKEGDGKHFAVVDAAMNDLMRPSYYQAFHDIRPV 325

Query: 284 NTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
                        V G  C + D  G+      ++ GD I+      Y     + +N   
Sbjct: 326 TQHDAELLPALYDVVGPICESSDFLGKDRALA-LREGDLIAVMSSGAYGSTMSSNYNTRP 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYNN 365
                + N           ++     N
Sbjct: 385 RAAEVLVNGRHVRLVRARETFEQLIAN 411


>gi|148652160|ref|YP_001279253.1| diaminopimelate decarboxylase [Psychrobacter sp. PRwf-1]
 gi|148571244|gb|ABQ93303.1| diaminopimelate decarboxylase [Psychrobacter sp. PRwf-1]
          Length = 445

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 67/388 (17%), Positives = 126/388 (32%), Gaps = 24/388 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  KQ +L+              ++  A+K  +   +   L +   G    S  E
Sbjct: 54  GTPLYVYSKQAILDAYTAYTTSFAAIDHQVCYAVKANSNLAVLSVLAKAGAGFDLVSSGE 113

Query: 63  VMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLH--KK 117
           +              ++   K       A+ +        ++S+L+     A +L+    
Sbjct: 114 LARVLAVGADPSKIVFSGVGKTVTELTAALKAGIGCFNVESLSELDTLNAVAAELNVKAP 173

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENK 170
           I +R+NP V              ++ G                E   + G+  H   +  
Sbjct: 174 ISIRVNPDVDAKTHPYISTGLKDNKFGISHDIAVAAYQHAASLEHLQIVGIDCHIGSQLT 233

Query: 171 SFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYP---VKDFCQRLKEFSEK 224
               F A L  +    +       +++ I LGGG+     D     V +F   L    ++
Sbjct: 234 EIDPFVAALDKVCELIEALKQVGIELQHIDLGGGLGVIYIDEEVAKVSEFAAALLPKLQE 293

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIYP 283
             ++++ EPG +IV N   L T V  +         IVD+++   +   L   E A I  
Sbjct: 294 LGLKVFFEPGRSIVANAGMLVTKVEVLKPTEHRDFAIVDAAMNDLIRPALYQAEMAVIPV 353

Query: 284 NTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            T       +  + G  C  GD   +      + +GD ++      Y     + +N    
Sbjct: 354 QTASQASQKSWDIVGAVCETGDFLAKKRLLS-LAVGDILAITGAGAYGFVMSSNYNSRPR 412

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNNLS 367
           P   + + D         +    +   S
Sbjct: 413 PAEVMVSGDKHQVVRARETVAQLFETES 440


>gi|187735226|ref|YP_001877338.1| diaminopimelate decarboxylase [Akkermansia muciniphila ATCC
           BAA-835]
 gi|187425278|gb|ACD04557.1| diaminopimelate decarboxylase [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 429

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 65/397 (16%), Positives = 120/397 (30%), Gaps = 36/397 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP Y+  KQ +LN+             ++  A+K  +   + + + +   G    S  E+
Sbjct: 27  TPLYVYSKQTILNHFHRLREALAPLNAEVAYAVKACSNIAILNLMARNGAGFDIVSGGEL 86

Query: 64  -MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKA--QKLHKKI 118
             +           Y    K  +                + ++L      A    +   +
Sbjct: 87  FRVLKAGGDPSKCTYAGVGKTEQEIRYALAQGIYCFNVESEAELRAINAIAASMGVKAPV 146

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCENK 170
            +R+NP+V           +  ++ G   +                ++ GL  H   +  
Sbjct: 147 AVRVNPNVEAGTHKYITTGKAENKFGVDFERIESLYEMAARELPNLHLKGLQMHIGSQLT 206

Query: 171 SFLCFSAMLKNIEKEFG--HFITQIEWISLGGGIHFTD-----------KDYPVKD---- 213
               F   ++ +            IE+ S+GGGI                +         
Sbjct: 207 QAKPFLEAVRKVAPLAASLKEKHGIEFFSIGGGIGIVYQGTLDSGVQEWWNEDCAQLTLS 266

Query: 214 -FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPD 271
            + Q +    +   + I +EPG  IV N   L T  L       K   IVD+ +   +  
Sbjct: 267 TYAQAVVPTLQPLGLHIIVEPGRLIVGNAGALITRCLYEKNGKAKTFKIVDAGMNDLIRP 326

Query: 272 YLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
            L       I     P     TA V G  C +GD   +      V+ G+ ++      Y 
Sbjct: 327 ALYQGYHEIIPVREHPSGSCVTADVVGPICESGDFLAQNRDMPDVRQGELLAVLSAGAYG 386

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            +  + +N   M    + + D         S+ D   
Sbjct: 387 FSMSSNYNSRPMAEEVLVDGDQWNVIRSRQSWEDLIR 423


>gi|167647175|ref|YP_001684838.1| diaminopimelate decarboxylase [Caulobacter sp. K31]
 gi|167349605|gb|ABZ72340.1| diaminopimelate decarboxylase [Caulobacter sp. K31]
          Length = 432

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 68/390 (17%), Positives = 124/390 (31%), Gaps = 26/390 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSS 58
           + TP Y+  +  L  +          AGV    +  A+K  +   +   L     G  + 
Sbjct: 36  VGTPVYVYSRATLERHFTVFRDALLAAGVIDPLIAYAVKANSNVAVLKVLGNLGAGADTV 95

Query: 59  SLYEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL- 114
           S  EV         GE   ++   K     A    +    I   +  +LN     A +L 
Sbjct: 96  SEGEVRRALAAGIPGERIVFSGVGKKRGEIAFALRAGVAEINVESEPELNLIAAVAAELG 155

Query: 115 -HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-----SEIKNVN--GLMFHNN 166
              K+  R+NP V+          +  ++ G    +        S   N+   G+  H  
Sbjct: 156 VKAKVAFRVNPDVAAGGHAKIATGKSENKFGVSFAEAARLYANASNNANLEPIGVACHIG 215

Query: 167 CENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKD----FCQRLK 219
            +             +             +E + LGGG+     D P       F   + 
Sbjct: 216 SQITDLSPMRQAFTKMRGLVEQLLGEGLHVERLDLGGGLGVPYFDMPEPPSPADFAAMVG 275

Query: 220 EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK--NLVIVDSSVEAHVPDYLLYQE 277
           E ++   V++  EPG  I  N   L + V+ + E  +    +++D+++   +   +    
Sbjct: 276 EVTQGLPVKLAFEPGRVIAANAGVLVSEVIHVHERPEGKRFLVIDAAMNDLIRPAMYDAF 335

Query: 278 SA--TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                +    G     V G  C  GD F       P+  GD ++F     Y     + +N
Sbjct: 336 HDIRPLIKRAGETVYDVVGPICETGDTFTRDRALPPLAAGDLVAFMSAGAYGAAMASEYN 395

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              +    + + D         SY +    
Sbjct: 396 TRPLVPEVLVDGDTFAVIRARPSYEEILAR 425


>gi|241759521|ref|ZP_04757624.1| diaminopimelate decarboxylase [Neisseria flavescens SK114]
 gi|241320078|gb|EER56439.1| diaminopimelate decarboxylase [Neisseria flavescens SK114]
          Length = 406

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 65/385 (16%), Positives = 127/385 (32%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  K  L    +            +  A+K      +         G    S  E
Sbjct: 18  GTPLYVYSKSALTEAFENYQTAFAALNPLVCYAVKANGNLSIIKYFASLGSGFDIVSGGE 77

Query: 63  VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +       G   +T    V   + EI+ A+ +        ++ ++++ +  A +L K   
Sbjct: 78  LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIRKVAARLGKVAP 137

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D +E+           + G+  H   +  
Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHASRQSHLKIVGIDCHIGSQLT 197

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                    + I     +       +E + LGGG+    +D     +  + + +++    
Sbjct: 198 DLSPLVEACERILALVDQLVAEGIVLEHLDLGGGVGIVYQDENVPDLGAYAKEVQKLIGT 257

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++ LEPG ++V N   L T V  +     KN V+VD+++   +   L          
Sbjct: 258 RRLKLVLEPGRSLVGNAGALLTRVEFVKHGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317

Query: 284 NTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
            T      TA + G  C  GD  G+       + GD +       Y  +  + +N  N  
Sbjct: 318 ETKDIEPLTANIVGPICETGDFLGKDRTIA-CEEGDLLLIRSAGAYGSSMASNYNTRNRA 376

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + +        +  +      N
Sbjct: 377 AEVLVDGSECKLIRQRETIEQQMAN 401


>gi|57234679|ref|YP_181278.1| diaminopimelate decarboxylase [Dehalococcoides ethenogenes 195]
 gi|57225127|gb|AAW40184.1| diaminopimelate decarboxylase [Dehalococcoides ethenogenes 195]
          Length = 434

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 61/399 (15%), Positives = 118/399 (29%), Gaps = 36/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D+  +  N            A   +  A K F    +   L +        S 
Sbjct: 34  GTPLYVFDEATIRQNCRDFKREFSRRYADSSVSYASKAFLHPALLKILAEEGMSLDVVSG 93

Query: 61  YEVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115
            E+ +     F  +   ++   K  D    A+  +   I+ ++  ++      A +    
Sbjct: 94  GELSIASSAGFPMDMVYFHGNNKSADELRLALRLHVGRIVVDSFDEIKLLSKLADESGHI 153

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCE 168
             I LR+ P V           +  S+ G       E+          N+ G  FH   +
Sbjct: 154 PDILLRLTPGVDAHTHHHITTGKLDSKFGFPLFQAAEAVGLAMAQASLNLVGFHFHIGSQ 213

Query: 169 NK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL------ 218
                        +L+   +    +   IE + +GGG     +                 
Sbjct: 214 IFETQPFLDAIDLVLEFAAQVQERYGFDIEELDIGGGYGVQYEVDKPAPQVSVYAEAIGA 273

Query: 219 -----KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271
                    +     + +EPG A++        TV  I +     V       +  ++  
Sbjct: 274 KIVSKCHSLKLTPPSLNIEPGRAVIAQAGVALYTVGVIKDIPGIRVYASVDGGMGDNIRP 333

Query: 272 YLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
            L   +   +      ++      V G+ C +GDI         +K GD ++      Y 
Sbjct: 334 ALYEAKYEAVVANNVQSSEKQKVTVAGKFCESGDILITDIELPVLKTGDILAVPCCGAYC 393

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366
           +   + +NG   P + +          R  +  D  + L
Sbjct: 394 LPMSSNYNGYQRPAVVMLKNGEDRLIRRRETVEDL-SRL 431


>gi|153008332|ref|YP_001369547.1| diaminopimelate decarboxylase [Ochrobactrum anthropi ATCC 49188]
 gi|151560220|gb|ABS13718.1| diaminopimelate decarboxylase [Ochrobactrum anthropi ATCC 49188]
          Length = 421

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 65/389 (16%), Positives = 123/389 (31%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+  +  +  +              +  ALK  +   +  TL +   G  + S  
Sbjct: 25  VGTPFYVYSRATIERHFRVFSEAFAGMETLVTYALKANSNLAVLKTLAKLGAGADTVSEG 84

Query: 62  EVMLGH-EKFGGETHAYNV-AYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116
           E+              ++       E+D A+ +        +  +L     +A K  K  
Sbjct: 85  EIRRALAAGIPANKIVFSGVGKTPHEMDFALEAGIYCFNVESEPELEILSARAVKAGKVA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            + LRINP V           +  ++ G       E+  +       +V G+  H   + 
Sbjct: 145 SVSLRINPDVDAKTHAKISTGKSENKFGIPRVKAREAYARAASLPGLDVVGIDMHIGSQI 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221
                F      + +   E       I  + +GGG+    +           + + + + 
Sbjct: 205 IDLEPFDNAFALMAQLVKELQADGHNIRHVDVGGGLGIPYRTDNTPPPLPVAYAEIVAKH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278
            +   ++   EPG  IV N   L T V+ + E + KN VIVD+++   +   L       
Sbjct: 265 IKPLGLKTVFEPGRLIVGNAGLLVTEVIFVKEGDAKNFVIVDAAMNDLIRPTLYDAFHDI 324

Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                   +     A   G  C  GD  G          GD I+      Y     + +N
Sbjct: 325 KPVTLPKDDAPRIRADFVGPVCETGDYLGLDREVAKPAPGDLIAVCTTGAYGAVLSSTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    + + D         +Y +   
Sbjct: 385 SRLLIPEVLVDGDRYHVVRPRRTYEELLA 413


>gi|323519139|gb|ADX93520.1| diaminopimelate decarboxylase [Acinetobacter baumannii TCDC-AB0715]
          Length = 407

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 62/389 (15%), Positives = 121/389 (31%), Gaps = 26/389 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  K     +             ++  A+K  +   + + L +   G    S  E
Sbjct: 16  GTPLYVYSKAAFEKHYLDMDRAFDFIDHQICFAVKSNSNIAVLNVLAKLGAGFDIVSGGE 75

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++   K         N         + ++L++ +  A +L     
Sbjct: 76  LARVLKAGGDASKIVFSGLGKTEADIETSLNVGIACFNVESYAELDRIQKVAARLGKKAP 135

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNC--- 167
           I LR+NP V              ++ G                    + G+  H      
Sbjct: 136 ISLRVNPDVDAKTHPYISTGLKENKFGIPSDAVYETYQYAASLPNLEIVGIDCHIGSQLT 195

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224
           E K F+     +  +  E       ++ I +GGG+    KD       ++   +K   EK
Sbjct: 196 ETKPFVDALDRVIVMIDELKKLGINLKHIDIGGGLGVCYKDETPPSVEEYANSMKPALEK 255

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQES----A 279
             +++Y+EPG +I  N   L T V L      +N  I+D+++   +   L          
Sbjct: 256 LGLKVYMEPGRSISANAGVLLTKVDLLKPTTHRNFAIIDAAMNDLIRPALYEAWMDIQPV 315

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
               +T   T  + G  C  GD  G+      ++  D ++      Y     + +N    
Sbjct: 316 VPRTDTEEKTWDLVGAICETGDFIGKDRSLA-LQENDLLTVLGAGAYGFVMSSNYNTRGR 374

Query: 340 PTIAVKNVDGTIKAIREFSYNDY--YNNL 366
               + + + +       +         L
Sbjct: 375 AAEVMVSGEKSYLIRERETVESLWEKERL 403


>gi|169632675|ref|YP_001706411.1| diaminopimelate decarboxylase [Acinetobacter baumannii SDF]
 gi|169795020|ref|YP_001712813.1| diaminopimelate decarboxylase [Acinetobacter baumannii AYE]
 gi|184159195|ref|YP_001847534.1| diaminopimelate decarboxylase [Acinetobacter baumannii ACICU]
 gi|213158317|ref|YP_002320368.1| diaminopimelate decarboxylase [Acinetobacter baumannii AB0057]
 gi|215482568|ref|YP_002324760.1| diaminopimelate decarboxylase [Acinetobacter baumannii AB307-0294]
 gi|301345397|ref|ZP_07226138.1| diaminopimelate decarboxylase [Acinetobacter baumannii AB056]
 gi|301511589|ref|ZP_07236826.1| diaminopimelate decarboxylase [Acinetobacter baumannii AB058]
 gi|301594791|ref|ZP_07239799.1| diaminopimelate decarboxylase [Acinetobacter baumannii AB059]
 gi|332854282|ref|ZP_08435282.1| diaminopimelate decarboxylase [Acinetobacter baumannii 6013150]
 gi|332865658|ref|ZP_08436484.1| diaminopimelate decarboxylase [Acinetobacter baumannii 6013113]
 gi|332876024|ref|ZP_08443810.1| diaminopimelate decarboxylase [Acinetobacter baumannii 6014059]
 gi|169147947|emb|CAM85810.1| diaminopimelate decarboxylase [Acinetobacter baumannii AYE]
 gi|169151467|emb|CAP00216.1| diaminopimelate decarboxylase [Acinetobacter baumannii]
 gi|183210789|gb|ACC58187.1| Diaminopimelate decarboxylase [Acinetobacter baumannii ACICU]
 gi|193078108|gb|ABO13049.2| diaminopimelate decarboxylase [Acinetobacter baumannii ATCC 17978]
 gi|213057477|gb|ACJ42379.1| diaminopimelate decarboxylase [Acinetobacter baumannii AB0057]
 gi|213986285|gb|ACJ56584.1| diaminopimelate decarboxylase [Acinetobacter baumannii AB307-0294]
 gi|322509109|gb|ADX04563.1| lysA [Acinetobacter baumannii 1656-2]
 gi|332728098|gb|EGJ59487.1| diaminopimelate decarboxylase [Acinetobacter baumannii 6013150]
 gi|332735179|gb|EGJ66259.1| diaminopimelate decarboxylase [Acinetobacter baumannii 6013113]
 gi|332735890|gb|EGJ66931.1| diaminopimelate decarboxylase [Acinetobacter baumannii 6014059]
          Length = 416

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 62/389 (15%), Positives = 121/389 (31%), Gaps = 26/389 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  K     +             ++  A+K  +   + + L +   G    S  E
Sbjct: 25  GTPLYVYSKAAFEKHYLDMDRAFDFIDHQICFAVKSNSNIAVLNVLAKLGAGFDIVSGGE 84

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++   K         N         + ++L++ +  A +L     
Sbjct: 85  LARVLKAGGDASKIVFSGLGKTEADIETSLNVGIACFNVESYAELDRIQKVAARLGKKAP 144

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNC--- 167
           I LR+NP V              ++ G                    + G+  H      
Sbjct: 145 ISLRVNPDVDAKTHPYISTGLKENKFGIPSDAVYETYQYAASLPNLEIVGIDCHIGSQLT 204

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224
           E K F+     +  +  E       ++ I +GGG+    KD       ++   +K   EK
Sbjct: 205 ETKPFVDALDRVIVMIDELKKLGINLKHIDIGGGLGVCYKDETPPSVEEYANSMKPALEK 264

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQES----A 279
             +++Y+EPG +I  N   L T V L      +N  I+D+++   +   L          
Sbjct: 265 LGLKVYMEPGRSISANAGVLLTKVDLLKPTTHRNFAIIDAAMNDLIRPALYEAWMDIQPV 324

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
               +T   T  + G  C  GD  G+      ++  D ++      Y     + +N    
Sbjct: 325 VPRTDTEEKTWDLVGAICETGDFIGKDRSLA-LQENDLLTVLGAGAYGFVMSSNYNTRGR 383

Query: 340 PTIAVKNVDGTIKAIREFSYNDY--YNNL 366
               + + + +       +         L
Sbjct: 384 AAEVMVSGEKSYLIRERETVESLWEKERL 412


>gi|254508819|ref|ZP_05120930.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus 16]
 gi|219548276|gb|EED25290.1| diaminopimelate decarboxylase [Vibrio parahaemolyticus 16]
          Length = 417

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 55/378 (14%), Positives = 108/378 (28%), Gaps = 24/378 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  + +       +    +  A+K  +  G+ + L +   G    S  E
Sbjct: 27  GTPLYVYSRATLERHWNAFDKSVGDHPHLVCYAVKANSNLGVLNALARIGSGFDIVSGGE 86

Query: 63  V-MLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +  +           ++   K       A+          +  +L +    A +L     
Sbjct: 87  LERVIAAGGDASKVVFSGVGKTEQEMQRALELGIKCFNVESEPELERLNKVAGQLGVKAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           I LRINP V  +           ++ G                   +V G+  H   +  
Sbjct: 147 ISLRINPDVDANTHPYISTGLRDNKFGIAFDRAPAVYQFAASLENLDVKGIDCHIGSQLT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F         +  +       I+ + +GGG+           P       L     
Sbjct: 207 DIEPFIDATDRLLALIDDLKEQGIDIKHLDVGGGLGVVYRDEMPPEPSDYAKALLSRLDN 266

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279
              +++  EPG AI  N   L T V  +         I+D+++   +   L         
Sbjct: 267 HKHLELIFEPGRAIAANAGILLTKVEFLKHTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       + G  C  GD  G+      ++  D ++      Y     + +N    
Sbjct: 327 VAPREGEATEYDLVGPICETGDFLGKDRRLV-LEENDLLAVRSAGAYGFVMSSNYNTRVR 385

Query: 340 PTIAVKNVDGTIKAIREF 357
               + + D +    +  
Sbjct: 386 AAEVMVDGDQSHLVRQRE 403


>gi|93005050|ref|YP_579487.1| diaminopimelate decarboxylase [Psychrobacter cryohalolentis K5]
 gi|92392728|gb|ABE74003.1| diaminopimelate decarboxylase [Psychrobacter cryohalolentis K5]
          Length = 443

 Score =  233 bits (594), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 66/385 (17%), Positives = 118/385 (30%), Gaps = 28/385 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  KQ +L+          +   ++  A+K  +   +   L Q   G    S  E
Sbjct: 49  GTPCYVYSKQAILDVYQAYTDSFASLTHQICYAVKANSNLAVLGVLAQAGAGFDIVSRGE 108

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +M             ++   K                   ++S+L    + A +L K   
Sbjct: 109 LMRVLAAGGEATRVVFSGVGKTYSDIEYALNQGIGCFNVESISELTLINEVAAQLDKSAP 168

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G   +D +            ++ G+  H   +  
Sbjct: 169 ISLRVNPDVDAKTHPYISTGLKDNKFGIAHEDALVVYQQAAKLSHIDIVGIDCHIGSQLT 228

Query: 171 SFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224
               F A L  +            ++  I LGGG+     D       +F   L     +
Sbjct: 229 EVAPFVAALDKVIELVHSLRKAGIELRHIDLGGGLGVRYIDETPVSIDEFANALLPKLSE 288

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATI-- 281
             + ++ EPG +IV N   L T V  +         IVD+++   +   L   E A I  
Sbjct: 289 LGLTVFFEPGRSIVANAGVLLTKVDVLKPTEHKNFAIVDAAMNDLIRPALYQAEMAVIPN 348

Query: 282 ------YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                           + G  C  GD   +      +  GD ++      Y     + +N
Sbjct: 349 VLPSNGINTESTEPWDIVGAICETGDFLAKDRLLS-LSTGDILAITGAGAYGFTMSSNYN 407

Query: 336 GINMPTIAVKNVDGTIKAIREFSYN 360
                +  +   D      +  +  
Sbjct: 408 SRPRASEVMVADDRHQLIRKRETVE 432


>gi|297171019|gb|ADI22033.1| diaminopimelate decarboxylase [uncultured myxobacterium
           HF0200_05J13]
          Length = 420

 Score =  233 bits (594), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 72/381 (18%), Positives = 122/381 (32%), Gaps = 24/381 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  K  +  ++       K+    +  A+K  A   + D L Q   G  + S+ E
Sbjct: 26  GTPTYVYSKATISRHVRVLQEALKDLPHLICYAVKANANLAILDLLQQLGCGFDAVSVGE 85

Query: 63  VMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIG 119
           +           +T    V  +D EIDA LS     I   +  +L    D A K + +  
Sbjct: 86  LARVSHIGASPAKTIVSGVGKRDDEIDAALSADVLYICAESREELEAIGDIAAKRNTRAR 145

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCENK 170
             +R+NP V              ++ G   +  IE     +        G+  H   +  
Sbjct: 146 VSIRVNPDVDAKTHPYIATGMNKNKFGVPIERAIELYQHGLTIPSIELVGVTCHIGSQVT 205

Query: 171 SFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEK 224
               F    + +    +        +++I +GGG+                  L +    
Sbjct: 206 ELSPFIDAAERMVELTRNLRALGAPLQFIGMGGGLGIPYGSETPPSPADYGQALSKLLGA 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATIYP 283
             + + LEPG  IV N   L + V+   E  +     +D+ +   +    LYQ    I  
Sbjct: 266 LGLTVILEPGRVIVGNAGILLSRVVRTKEGAERRFALIDAGMNDLIRPA-LYQAHHQIEA 324

Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
              P        V G  C + D F E      ++ GD I+      Y       +NG   
Sbjct: 325 VAAPSDEREIIDVVGPVCESADTFAEQAEFTKLEPGDLIAIRSAGAYGFVMACNYNGRPR 384

Query: 340 PTIAVKNVDGTIKAIREFSYN 360
           P   +             +  
Sbjct: 385 PAEVLCTGSTKQLIRARETLE 405


>gi|301169445|emb|CBW29045.1| diaminopimelate decarboxylase, PLP-binding [Haemophilus influenzae
           10810]
          Length = 415

 Score =  233 bits (594), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 59/384 (15%), Positives = 115/384 (29%), Gaps = 25/384 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +  G+ + + +   G    S  E
Sbjct: 26  GTPLYVYSRATLERHWHAFDSAFGKHPHLICFAVKSCSNIGVLNIMAKLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +              ++     ++  + A+          +VS+L      A        
Sbjct: 86  LERVLAAGGDASKVVFSGVAKSREEIMRALEVGIRCFNVESVSELKHINQIAGEMGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G    +  E            + G+  H   +  
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVNEAREVYKLASTLPNIKITGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F         + ++       ++ + LGGG+  T       +P       L++   
Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGLGVTYTDETPPHPSDYANALLEKLKN 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
              ++I LEPG AI  N   L   V  +     +N  I D+ +   +   L       + 
Sbjct: 266 YPELEIILEPGRAISANAGILVAKVQYLKSNESRNFAITDTGMNDMIRPALYEAYMNIVE 325

Query: 283 PNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +           V G  C   D  G+      +  GD I+      Y  +  + +N   
Sbjct: 326 IDRTLEREKAIYDVVGPVCETSDFLGKQRELS-IAEGDYIAQCSAGAYGASMSSNYNSRA 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362
                + + D +    R  +  + 
Sbjct: 385 RTAEVLVDRDKSYLIRRRETLQEL 408


>gi|23015819|ref|ZP_00055585.1| COG0019: Diaminopimelate decarboxylase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 424

 Score =  233 bits (594), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 61/392 (15%), Positives = 114/392 (29%), Gaps = 26/392 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           + TP+Y      L  +        K+AG    +  A K      +  T  Q   G    S
Sbjct: 25  VGTPFYCYSTATLERHYTVFAEALKSAGLDATICFAAKANPNMAVIRTFAQLGAGADVVS 84

Query: 60  LYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKA--QKL 114
             E+              ++   K               I   +  +L    + A  + L
Sbjct: 85  EGELRQALAAGVPAARIVFSGVGKTRHELEFAVAKGIFQINVESEPELEMLSEVAAARGL 144

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-----KNVNGLMFHNNCEN 169
              I +R+NP V           +  ++ G +     E          V  +    +  +
Sbjct: 145 VMPIAIRVNPDVDAGTHAKITTGKKENKFGIEWTRAREVYARAKALPGVEPVSIACHIGS 204

Query: 170 K-----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEF 221
           +      F      ++++          I  + LGGG+     D    +   + + +K  
Sbjct: 205 QLTELDPFREAFLRVRDLVAMLRADGIDIRRLDLGGGLGVPYDDETPPEPKAYAEVIKAS 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESAT 280
                 +   EPG  +V N   L ++++ + E       IVD+++       L     + 
Sbjct: 265 LGDLGCRFIFEPGRLLVGNAGILVSSIIRVKEGSTRTFLIVDAAMNDLARPSLYDAYHSI 324

Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                           V G  C  GD F       P++ GD ++      Y     + +N
Sbjct: 325 FPVAEPKAGAPLAEVDVVGPVCETGDTFARQRRLPPMRAGDLLALGTAGAYGAAMSSTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367
              +    +             SY D  +  S
Sbjct: 385 TRPLIPEVLVKGADYAVIRARPSYEDMRSLES 416


>gi|293609896|ref|ZP_06692198.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292828348|gb|EFF86711.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 416

 Score =  233 bits (594), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 63/386 (16%), Positives = 121/386 (31%), Gaps = 24/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  K     +             ++  A+K  +   + + L +   G    S  E
Sbjct: 25  GTPLYVYSKAAFEKHYLDMDRAFDFIDHQICFAVKSNSNIAVLNVLAKLGAGFDIVSGGE 84

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKA--QKLHKK 117
           +              ++   K         N         + ++L++ +  A        
Sbjct: 85  LARVLKAGGDASKVVFSGLGKTEADIETSLNVGIACFNVESYAELDRLQKVAARIGKKAP 144

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNC--- 167
           I LR+NP V              ++ G                    + G+  H      
Sbjct: 145 ISLRVNPDVDAKTHPYISTGLKENKFGIPSDTVYETYQYAASLPNLEIIGIDCHIGSQLT 204

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224
           E K F+     +  + +E       ++ I +GGG+    KD       ++   +K   EK
Sbjct: 205 ETKPFVDALDRVMLMIEELKKLGITLKHIDIGGGLGVCYKDETPPSVEEYANSMKPALEK 264

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQES----A 279
             +++Y+EPG +I  N   L T V L    + +N  I+D+++   +   L          
Sbjct: 265 LGLKVYMEPGRSISANAGVLLTKVDLLKPTSHRNFAIIDAAMNDLIRPALYEAWMDIQPV 324

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
               +T   T  + G  C  GD  G+      +K  D ++      Y     + +N    
Sbjct: 325 VPSSDTEEKTWDLVGAICETGDFIGKDRSLA-LKENDLLAVLGAGAYGFVMSSNYNTRGR 383

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365
               + + D         +    + N
Sbjct: 384 AAEVMVSGDKAHLIRERETVESLWEN 409


>gi|187736145|ref|YP_001878257.1| carboxynorspermidine decarboxylase [Akkermansia muciniphila ATCC
           BAA-835]
 gi|187426197|gb|ACD05476.1| carboxynorspermidine decarboxylase [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 400

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 115/398 (28%), Positives = 190/398 (47%), Gaps = 38/398 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            ++I    L  N      +   AG ++ LALK F+ W  F+ L+ ++DG  +S L+E  L
Sbjct: 3   AFIISLPALERNALILRDVADAAGCRIALALKGFSCWPCFEALSPWLDGCCASGLWEARL 62

Query: 66  GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK------IG 119
              +FG     Y+  +   EI  +      + FN+++Q ++F+++  +  +        G
Sbjct: 63  ARRRFGKHVLTYSPGHAPEEIAELAEISSHLDFNSLTQWSRFREEVMRHPRFVSGELKCG 122

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           LR+NP  S     + DP  P SRLG        +++  ++GL FH  CE  +      M 
Sbjct: 123 LRVNPQCSTGHTPIYDPCAPGSRLGVTPDMMQGADLSGISGLHFHTLCEQGADDLAVTM- 181

Query: 180 KNIEKEFGHFI--TQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI 237
           + +E+ FGH +   +I W+++GGG   T  DY  K     ++   E+Y V+++LEPGEA 
Sbjct: 182 EAVERHFGHLLSRPEISWLNMGGGHWITKPDYDRKLLAALIRRIRERYGVEVWLEPGEAA 241

Query: 238 VTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESATIYPN------------ 284
             +T  L   VLD+      N  I+D S  AH+PD L       ++              
Sbjct: 242 AIHTGVLRCRVLDLFSAEGVNHAILDVSASAHMPDTLEMPYRPDVFQIAGDASLRSAQQP 301

Query: 285 ----------------TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
                              YT  +   +CLAGD  G++ F +P+ +GD + F+D+A Y +
Sbjct: 302 AVRLEGESYALAGKAGEKAYTYRLGAPTCLAGDRLGDYSFAEPLAVGDELVFDDMAHYTM 361

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366
            +  +FNG+  P IAV+  DG+++ +R FSY D+   L
Sbjct: 362 VKTTFFNGVRHPDIAVQRKDGSVETVRRFSYEDFEARL 399


>gi|301057683|ref|ZP_07198758.1| diaminopimelate decarboxylase [delta proteobacterium NaphS2]
 gi|300448229|gb|EFK11919.1| diaminopimelate decarboxylase [delta proteobacterium NaphS2]
          Length = 420

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 63/385 (16%), Positives = 116/385 (30%), Gaps = 22/385 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+     L  + D       +       ++K  +   +         G    S  
Sbjct: 25  VGTPAYVYSHATLKQHFDAFDGAFGDVKHLTCYSMKSNSNKALLALFAGRGGGVDIVSGG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118
           E+              ++   K         + D       +  +L K    A++  +K 
Sbjct: 85  ELYRALNAGVDPSRIVFSGVGKSLSDLEYAVSSDILMFNVESPQELLKLNQVAREKGRKA 144

Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
            +  R+NP V              ++ G   ++ I    K        V G+  H   + 
Sbjct: 145 RISIRVNPDVDPKTHPYISTGLKENKFGIGVEEAIRQYEKATTLKGVEVVGVSCHIGSQL 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSE 223
                F   LK +++           I ++ LGGG+  T  +      K + Q +K    
Sbjct: 205 TRTSPFVDALKKLKELIARLEKMNIAIRYLDLGGGLGITYDNEVPPHPKQYAQDIKRELA 264

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIY 282
                + LEPG  IV N   L   VL    + +    V D+++   +   L         
Sbjct: 265 SSDWTLILEPGRVIVGNAGILVAKVLYAKTSHEKNFFVVDAAMNDLMRPSLYGAYHGIQP 324

Query: 283 PNTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
               P     A V G  C +GD   +    + +   D I+      Y  +  + +N    
Sbjct: 325 VKKTPGERLKADVVGPICESGDFLAKDRLIETLTSEDLIAVMSAGAYGFSMSSTYNSRPR 384

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
               + + D         ++ D   
Sbjct: 385 VCEVMVSEDRFEVIRERETFADLVR 409


>gi|302392438|ref|YP_003828258.1| diaminopimelate decarboxylase [Acetohalobium arabaticum DSM 5501]
 gi|302204515|gb|ADL13193.1| diaminopimelate decarboxylase [Acetohalobium arabaticum DSM 5501]
          Length = 437

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 70/400 (17%), Positives = 134/400 (33%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++D+++L +N        +      + + A K F +  +   + +   G    S 
Sbjct: 30  GTPLYILDEEELRDNCRAYRQAFEEWYPNSETIYASKAFMSLTICKIVEEEGLGLDVVSG 89

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSN--CDTIIFNTVSQLNKFKDKAQK--LH 115
            E+    E  F  +   ++   K  E   ++ N     I+ +   +L    + A +    
Sbjct: 90  GELYTALEADFPTDKIYFHGNNKTPEELEMVLNEEIGRIVVDNNYELELLNELADQQGKR 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G         E  K  +E E  +V G+  H  
Sbjct: 150 ADILIRVTPGVEAHTHSYIQTGQTDSKFGVGIQNGLALETVKKAVELENIDVKGIHCHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDF-------- 214
            +  +   F   +  +         +    +E +++GGGI     D              
Sbjct: 210 SQIFNLESFEVAVDVMLDFVEEVKIETGLVMEELNIGGGIGIKYTDKDQSVSIDQYAELV 269

Query: 215 CQRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            + +K+  E+ ++    I  EPG +I+    +   TV  I         V     +  ++
Sbjct: 270 AKAIKQKCEEINIPLPKIINEPGRSIIGTAGSTIYTVGSIKNIPDVRKYVAVDGGMPDNI 329

Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   E   I  N           + G+ C +GD+         ++ GD +       
Sbjct: 330 RPALYEAEYEAIVANKANRKPEEVVSITGKCCESGDMLIWDIELPEMEPGDVLLTPCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y     N +N +  P + + N     + IR   Y D    
Sbjct: 390 YGYAMANNYNSLPKPGVVLINNGQVEEIIRGERYEDLVAK 429


>gi|294651118|ref|ZP_06728454.1| diaminopimelate decarboxylase [Acinetobacter haemolyticus ATCC
           19194]
 gi|292823012|gb|EFF81879.1| diaminopimelate decarboxylase [Acinetobacter haemolyticus ATCC
           19194]
          Length = 416

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 63/389 (16%), Positives = 121/389 (31%), Gaps = 26/389 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  K  L  +             ++  A+K  +   + + L +   G    +  E
Sbjct: 25  GTPLYVYSKATLEKHYLDMDRAFDFIDHQICFAVKSNSNIAVLNVLAKLGAGFDIVTGGE 84

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++   K                   + ++L++ +  A KL     
Sbjct: 85  LARVLAAGGDPAKIVFSGLGKSEADIEKALTVGIACFNVESHAELDRIQKVAAKLGKKAP 144

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNC--- 167
           I LR+NP V              ++ G        +           + G+  H      
Sbjct: 145 ISLRVNPDVDAKTHPYISTGLKENKFGIPSDAVDATYQYAASLSNLEIVGIDCHIGSQLT 204

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEK 224
           E K F+     +  + ++       ++ I +GGG+    KD       +    ++   EK
Sbjct: 205 ETKPFVDALDRVILMIEQLKKLGINLKHIDIGGGLGVCYKDETPPTVAEYANSMRPALEK 264

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++Y+EPG +I  N   L T V L    N +N  I+D+++   +   L          
Sbjct: 265 LGLKVYMEPGRSISANAGALLTKVDLLKPTNHRNFAIIDAAMNDLIRPALYEAWMDIQSV 324

Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
           N        T  + G  C  GD  G+      ++  D ++      Y     + +N    
Sbjct: 325 NPNSDVEVKTWDLVGAICETGDFLGKERNLA-LQENDVLAVLGAGAYGFVMSSNYNSRGR 383

Query: 340 PTIAVKNVDGTIKAIREFSYNDY--YNNL 366
               + N D         +         L
Sbjct: 384 AAEVMVNGDQVYLIRERETIESLWEKERL 412


>gi|37679422|ref|NP_934031.1| diaminopimelate decarboxylase [Vibrio vulnificus YJ016]
 gi|37198166|dbj|BAC94002.1| diaminopimelate decarboxylase [Vibrio vulnificus YJ016]
          Length = 381

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 168/368 (45%), Positives = 241/368 (65%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTP+++ID+ KL+ NL+ A  +++ +GVKL+LALKCF+ WG+FD +  Y+DGTTSS  +
Sbjct: 10  LKTPFFMIDEAKLIQNLEIAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPF 69

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG+EKFGGETHAY+V Y + ++  V   CD IIFN+ SQL   +   +     IGLR
Sbjct: 70  EVKLGYEKFGGETHAYSVGYSEDDVREVADLCDKIIFNSQSQLAAHRHIVEGKA-SIGLR 128

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP VSY+   LA+P R FSRLG +      +   ++NG+MFH NCENK    F A+L +
Sbjct: 129 LNPGVSYASQDLANPARQFSRLGVQADHIDPAVFDSINGVMFHMNCENKDVDAFIALLDS 188

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I + FG ++ +++W+S+GGG+ FT   Y V+     LK FSEK+ VQ+YLEPGEAI+T T
Sbjct: 189 ISERFGAYLNKLDWVSMGGGVFFTWPGYDVEKLGLALKAFSEKHGVQMYLEPGEAIITKT 248

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299
           T L  TV+D+ EN     IVDS+ EAH  D L+Y+E A++      G +  ++   SCLA
Sbjct: 249 TDLVVTVVDLVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASENGEHEYVIGSCSCLA 308

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F    F++P+ +G R+   D AGY + + NWFNG+ MP++  +  +G I+ + EF Y
Sbjct: 309 GDQFCVAKFDQPLHVGQRLHILDSAGYTMVKLNWFNGLKMPSVYCERTNGEIQKLNEFGY 368

Query: 360 NDYYNNLS 367
            D+   LS
Sbjct: 369 EDFKRTLS 376


>gi|251793705|ref|YP_003008435.1| diaminopimelate decarboxylase [Aggregatibacter aphrophilus NJ8700]
 gi|247535102|gb|ACS98348.1| diaminopimelate decarboxylase [Aggregatibacter aphrophilus NJ8700]
          Length = 416

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 61/384 (15%), Positives = 117/384 (30%), Gaps = 25/384 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  K  L  +              +  A+K      + + + +   G    S  E
Sbjct: 26  GTPLYIYSKATLERHWYAFDKAFGEHPHLVCYAVKSNPNIAILNVMAKLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++     +     A+          + ++L +  + A++L     
Sbjct: 86  LERVLVAGGNPAKVVFSGVAKSEPEITRALEVGIRCFNVESEAELLRINEVARRLGKTAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G   +   E            + G+  H   +  
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVEQAREVYKLAATLPNIEIVGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
               F   +     + ++       ++ + LGGG+  T  D       +  K   EK + 
Sbjct: 206 ELQPFLDAVDRLIVLMEQLKQDGIALKHLDLGGGLGVTYTDETPPHPTEYAKALWEKLNA 265

Query: 228 ----QIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
               +I +EPG AI  N   L T V  +     +N  IVD+ +   +   L       + 
Sbjct: 266 FSELEIIVEPGRAITANAGILVTKVEYLKSNESRNFAIVDAGMNDMIRPALYQAYMNILE 325

Query: 283 PNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +           V G  C   D  G+      +  GD ++      Y  +  + +N   
Sbjct: 326 IDRTLAREEKIYDVVGPICETSDFLGKQRKLA-IAQGDYLAQRSAGAYGASMSSNYNSHP 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362
                + + D      R    N+ 
Sbjct: 385 RTAEVMVDGDKAYLIRRREVLNEL 408


>gi|220921674|ref|YP_002496975.1| diaminopimelate decarboxylase [Methylobacterium nodulans ORS 2060]
 gi|219946280|gb|ACL56672.1| diaminopimelate decarboxylase [Methylobacterium nodulans ORS 2060]
          Length = 430

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 64/388 (16%), Positives = 117/388 (30%), Gaps = 26/388 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP+Y      L  +              +  A+K  +   +  TL +   G    S  
Sbjct: 25  IGTPFYCYASATLERHYRVFAEAFAGDDPLVCYAVKANSNQAVLATLARLGAGMDIVSEG 84

Query: 62  EVMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E+          E   ++     K     A+ +        +  +L    + AQ L    
Sbjct: 85  ELRRALAAGVPAERIVFSGVAKTKAEMEAALQAGILCFNVESEPELAALSEVAQGLGRDA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            + +R+NP V           +  ++ G       E   +        + G+  H   + 
Sbjct: 145 PVSIRVNPDVDARTHAKISTGKSENKFGIPISRAREVYARAATLPGLRLAGVDMHIGSQI 204

Query: 170 K---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221
                F   +A+L  + ++      ++  I  GGG+                F   L+  
Sbjct: 205 TDLAPFDNAAALLAELARDLMAAGHRLHHIDFGGGLGIPYRDDNAPPPDPSAFAAVLRPH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278
                ++   E G  I  N   L T V+ + +   +  VIVD+++   +   L       
Sbjct: 265 FRPLGLRPVFEIGRMIAGNAGILVTRVVYVKQGEGRTFVIVDAAMNDLIRPTLYEAYHAI 324

Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
              A   P+    TA V G  C +GD          V  GD I+      Y   +   +N
Sbjct: 325 RPVAQPDPHAPRLTADVVGPVCESGDYLALGREMPAVAPGDLIAVMTAGAYGAVQAGTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY 363
              +    +             +Y +  
Sbjct: 385 TRRLVPEVLVRGADHAVVRPRQTYEELI 412


>gi|270340059|ref|ZP_06006901.2| carboxynorspermidine decarboxylase [Prevotella bergensis DSM 17361]
 gi|270332813|gb|EFA43599.1| carboxynorspermidine decarboxylase [Prevotella bergensis DSM 17361]
          Length = 393

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 118/380 (31%), Positives = 192/380 (50%), Gaps = 19/380 (5%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y++++ KL  NL    ++ K A ++++LA K FA W  F    +Y+   T+SSL E  
Sbjct: 14  PAYILEEAKLRKNLQLITHVAKEANIEVILAFKAFALWKTFPIFREYIHSVTASSLSEAR 73

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKIGLRI 122
           LG E+FG   HAY+ AY D EID +      + FN++SQ+ ++  + ++      +GLRI
Sbjct: 74  LGREEFGTPVHAYSPAYTDYEIDTIARCSSHLTFNSLSQMTRYMPRVKQINPTISLGLRI 133

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           NP  S    IL DP  P SR G + +   +     ++G   H +CEN     F   L++I
Sbjct: 134 NPEYSEIDNILYDPCAPGSRFGVRAEKLPDRLTDGIDGFHCHCHCENN-ADVFQRTLEHI 192

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNT 241
           E++F  + TQI+WI+ GGG   T K Y  +   + L  F ++Y    + LEPG A +  T
Sbjct: 193 EQKFSKWFTQIKWINFGGGHLMTKKGYDTELLIRLLNNFHKRYPHLHVILEPGSAFLWET 252

Query: 242 TTLNTTVLDISENIKNLVIVDSSVE-AHVPDYLLYQESATIYPNTGPYT----------- 289
             L + V+DI E+      + +     H+PD L      ++       +           
Sbjct: 253 GPLVSQVVDIVEDKSIRTAILNVSFACHMPDCLEGPYWPSVRGAKTYESPDGSMVKTAGT 312

Query: 290 ---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
                + G SCL+GD  G + F+  + +G  +  ED+  Y   + N FNG++ P+I +  
Sbjct: 313 KNVYRLGGNSCLSGDFMGYWEFDHELHVGQNVILEDMIHYTTVKTNMFNGVSHPSIFLAR 372

Query: 347 VDGTIKAIREFSYNDYYNNL 366
            +G ++ +RE+SY DY + +
Sbjct: 373 ENGELELLREYSYEDYKSRM 392


>gi|239500988|ref|ZP_04660298.1| diaminopimelate decarboxylase [Acinetobacter baumannii AB900]
          Length = 416

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 63/389 (16%), Positives = 123/389 (31%), Gaps = 26/389 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  K     +             ++  A+K  +   + + L +   G    S  E
Sbjct: 25  GTPLYVYSKAAFEKHYLDMDRAFDFIDHQICFAVKSNSNIAVLNVLAKLGAGFDIVSGGE 84

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++   K         N         + ++L++ +  A +L     
Sbjct: 85  LARVLKAGGDASKIVFSGLGKTEADIETSLNVGIACFNVESYAELDRIQKVAARLGKKAP 144

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNC--- 167
           I LR+NP V              ++ G                    + G+  H      
Sbjct: 145 ISLRVNPDVDAKTHPYISTGLKENKFGIPSDAVYETYQYAASLPNLEIVGIDCHIGSQLT 204

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
           E K F+     +  +  E       ++ I +GGG+    KD     V+++   +K   EK
Sbjct: 205 ETKPFVDALDRVIVMIDELKKLGINLKHIDIGGGLGVCYKDEIPPSVEEYANSMKPALEK 264

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQES----A 279
             +++Y+EPG +I  N   L T V L      +N  I+D+++   +   L          
Sbjct: 265 LGLKVYMEPGRSISANAGVLLTKVDLLKPTTHRNFAIIDAAMNDLIRPALYEAWMDIQPV 324

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
               +T   T  + G  C  GD  G+      ++  D ++      Y     + +N    
Sbjct: 325 VPRTDTEEKTWDLVGAICETGDFIGKDRSLA-LQENDLLTVLGAGAYGFVMSSNYNTRGR 383

Query: 340 PTIAVKNVDGTIKAIREFSYNDY--YNNL 366
               + + + +       +         L
Sbjct: 384 AAEVMVSGEKSYLIRERETVESLWEKERL 412


>gi|260774852|ref|ZP_05883754.1| diaminopimelate decarboxylase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260609277|gb|EEX35432.1| diaminopimelate decarboxylase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 417

 Score =  233 bits (593), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 56/378 (14%), Positives = 108/378 (28%), Gaps = 24/378 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +     + +            +  A+K  +  G+ +TL +   G    S  E
Sbjct: 27  GTPLYVYSRATFERHWNAFDKSVGEHPHLVCYAVKANSNLGVLNTLARLGSGFDIVSGGE 86

Query: 63  V-MLGHEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +  +           ++   K       A+          +  +L +    A +L     
Sbjct: 87  LERVIAAGGEASKVVFSGVGKTAPEMKRALELGIKCFNVESEPELERLNKVAGELGVKAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           I LRINP V  +           ++ G                    + G+  H   +  
Sbjct: 147 ISLRINPDVDANTHPYISTGLRDNKFGIAFDRAPAVYQFAQGLKNLTIKGIDCHIGSQLT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F         +  +       IE + +GGG+           P +     L     
Sbjct: 207 DIEPFIDATDRLLALIDDLKAQGINIEHLDVGGGLGVVYRDELPPEPSEYAKALLGRLEN 266

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279
              +++  EPG AI  N   L T V  +         I+D+++   +   L         
Sbjct: 267 HQDLELIFEPGRAIAANAGVLLTKVEFLKHTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                  P T  + G  C  GD  G+      ++  D ++      Y     + +N    
Sbjct: 327 VNPREGEPVTYDLVGPICETGDFLGKDRALV-LQENDLLAVRSAGAYGFVMSSNYNTRTR 385

Query: 340 PTIAVKNVDGTIKAIREF 357
               + + +      +  
Sbjct: 386 VAEVMVDGNKAHLVRQRE 403


>gi|90581046|ref|ZP_01236846.1| putative diaminopimelate decarboxylase [Vibrio angustum S14]
 gi|90437742|gb|EAS62933.1| putative diaminopimelate decarboxylase [Vibrio angustum S14]
          Length = 416

 Score =  233 bits (593), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 59/383 (15%), Positives = 107/383 (27%), Gaps = 24/383 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +  G+ + L +   G    S  E
Sbjct: 27  GTPLYVYSRATLERHWKAFDEAVATHPHLICYAVKANSNLGVLNVLARLGSGFDIVSQGE 86

Query: 63  V-MLGHEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +  +           ++   K       A+          +  +L +    A++L     
Sbjct: 87  LERVIAAGGDPAKVVFSGVGKTATEMKRALELGIKCFNVESEPELERLNAVAEELGVTAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LRINP V              ++ G      +E            V G+  H   +  
Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGIVFDRAVEVYRLAHSLPHLQVVGMDCHIGSQLT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
               F         +  E       I+ + LGGG+  T  D               +   
Sbjct: 207 DISPFIDATDRLLALVDELKAEGIHIQHLDLGGGLGVTYNDEQPPQPADYASALLARLEN 266

Query: 228 ----QIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279
               ++  EPG AI  N   L T V  +         IVD+++   +   L         
Sbjct: 267 YPDLELIFEPGRAIAANAGVLLTKVEFLKHTEHKNFAIVDAAMNDLIRPTLYSAWQDIVP 326

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                   +   + G  C  GD  G+      +  GD ++      Y     + +N    
Sbjct: 327 VSPRQGEAHVYDLVGPICETGDFIGKDRSLC-LAQGDLLAVRSAGAYGFVMASNYNTRAR 385

Query: 340 PTIAVKNVDGTIKAIREFSYNDY 362
               + + +         +    
Sbjct: 386 AAEIMVDGEQAHVVRERETLTQL 408


>gi|229543952|ref|ZP_04433011.1| diaminopimelate decarboxylase [Bacillus coagulans 36D1]
 gi|229325091|gb|EEN90767.1| diaminopimelate decarboxylase [Bacillus coagulans 36D1]
          Length = 438

 Score =  233 bits (593), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 62/400 (15%), Positives = 127/400 (31%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   +           +  GVK  +  A K F+A  M    ++        S 
Sbjct: 30  GTPLYVYDVALIRQRARAFKETFRKLGVKSQVAYASKAFSAIAMIQLADEEGLSLDVVSG 89

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E   ++   K  E   +   +    I+ +   +L+  ++   +  +K
Sbjct: 90  GELYTALAAGFPVEHIHFHGNNKSREELEMALDAGIGYIVADNFYELDMLENLCAEKGRK 149

Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
           +   LR+ P +           +  S+ G            K  + S    + G+  H  
Sbjct: 150 VSALLRVTPGIEAHTHDYILTGQEDSKFGFDLQNGQAEAALKQVLSSGWIKLLGVHCHIG 209

Query: 167 CENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-DFCQRLKEF 221
            +      F      ++  +++    +    E ++LGGG      +          ++E 
Sbjct: 210 SQIFETAGFVLAVQKIMDKLDEWHARYGYFPEVLNLGGGFGIRYTEEDHPLPPAYYVEEI 269

Query: 222 SEK----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            ++             +I++EPG ++V    T   +V    E       +     +  ++
Sbjct: 270 VKEVKKQAGSRRLPVPEIWIEPGRSLVGEAGTTLYSVGSRKEVPHVRKYIAVDGGMSDNI 329

Query: 270 PDYLLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   +  N        T  V G+ C +GD+             D ++      
Sbjct: 330 RPALYDAKYEAVLANRPLDKCEETVSVAGKCCESGDMLIWDLPLPKTGSDDLLAVFCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +           ++  +Y D   N
Sbjct: 390 YGYSMANNYNRIPRPPVVFVENGKDELVVKRETYEDLIRN 429


>gi|154686579|ref|YP_001421740.1| hypothetical protein RBAM_021480 [Bacillus amyloliquefaciens FZB42]
 gi|154352430|gb|ABS74509.1| LysA [Bacillus amyloliquefaciens FZB42]
          Length = 439

 Score =  233 bits (593), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 63/399 (15%), Positives = 127/399 (31%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   +     +        +   ++  A K F++  M     Q        S 
Sbjct: 30  GTPLYVYDVALIRERAKSFKQAFIDADLKAQVAYASKAFSSVAMIQLAEQEGLSLDVVSG 89

Query: 61  YEVMLG-HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115
            E+       F  +   ++     ++    A+      I+ +   +++   +  +K    
Sbjct: 90  GELFTAVAAGFPADRIHFHGNNKSEEELKMALDHQIGCIVVDNFYEISLLAELCRKSGRT 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
             + LRI P V           +  S+ G            +  ++S+   + G+  H  
Sbjct: 150 MDVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQIEKAIEQVLQSDHIRLLGVHCHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F    + I  +   +        E ++LGGG      +              
Sbjct: 210 SQIFDTAGFVLAAEKIFAKLNEWRESFGFVSEVLNLGGGFGIRYTEEDEPLHPAVYVEKI 269

Query: 215 CQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269
            + +KE +  ++  I   ++EPG ++V +  T   T+    E         VD  +  ++
Sbjct: 270 IEAVKENAALHAFDIPEIWIEPGRSLVGDAGTTLYTIGSQKEVPGTRKYAAVDGGMSDNI 329

Query: 270 PDYLLYQESATI----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   +           T  + G+ C +GD+         VK GD ++      
Sbjct: 330 RPALYQAKYEAVSANRIGEHHDKTVSIAGKCCESGDMLIWDIDLPEVKEGDLLAVFCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  N +N I  P +           IR  +Y D   
Sbjct: 390 YGYSMANNYNRIPRPAVVFVEDGEAHLVIRRETYEDIVK 428


>gi|260549303|ref|ZP_05823523.1| diaminopimelate decarboxylase [Acinetobacter sp. RUH2624]
 gi|260407709|gb|EEX01182.1| diaminopimelate decarboxylase [Acinetobacter sp. RUH2624]
          Length = 416

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 60/389 (15%), Positives = 118/389 (30%), Gaps = 26/389 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  K     +             ++  A+K  +   +   L +   G    S  E
Sbjct: 25  GTPLYVYSKTAFEKHYLDMDRAFDFIDHQICFAVKSNSNLAVLSVLAKLGAGFDIVSGGE 84

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++   K         N         + ++L++ +  A +L     
Sbjct: 85  LARVLKAGGDASKIVFSGLGKTEVDIETSLNVGIACFNVESYAELDRIQKVAARLGKKAP 144

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNC--- 167
           I LR+NP V              ++ G                    + G+  H      
Sbjct: 145 ISLRVNPDVDAKTHPYISTGLKENKFGIPSDAVYETYQYAASLPNLEIVGIDCHIGSQLT 204

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224
           E K F+     +  +  E       ++ I +GGG+    KD       ++   +K   EK
Sbjct: 205 ETKPFVDALDRVIVMIDELKKLGINLKHIDIGGGLGVCYKDETPPSVEEYANSMKPALEK 264

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLL---YQESAT 280
             +++Y+EPG +I  N   L T V L      +N  I+D+++   +   L          
Sbjct: 265 LGLKVYMEPGRSISANAGVLLTKVDLLKPTTHRNFAIIDAAMNDLIRPALYEAWMDIQPV 324

Query: 281 IYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
           +           + G  C  GD  G+      ++  D ++      Y     + +N    
Sbjct: 325 VPRTDTEEKVWDLVGAICETGDFIGKDRSLA-LQENDLLAVLGAGAYGFVMSSNYNTRGR 383

Query: 340 PTIAVKNVDGTIKAIREFSYNDY--YNNL 366
               + + + +       +         L
Sbjct: 384 AAEVMVSGENSYLIRERETVESLWEKERL 412


>gi|209695577|ref|YP_002263506.1| carboxynorspermidine decarboxylase [Aliivibrio salmonicida LFI1238]
 gi|208009529|emb|CAQ79821.1| carboxynorspermidine decarboxylase [Aliivibrio salmonicida LFI1238]
          Length = 381

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 173/368 (47%), Positives = 241/368 (65%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPY++ID+ KL+ NL+ A  +++ +GVKL+LALKCF+ WG+FD +  Y+DGTTSS  Y
Sbjct: 10  LKTPYFMIDEAKLIANLEVAKRLKEQSGVKLVLALKCFSTWGVFDLIKPYLDGTTSSGPY 69

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LGHE FGGETHAY+V Y + ++  V+  C+ +IFN+ SQL  ++   +     +GLR
Sbjct: 70  EVRLGHETFGGETHAYSVGYSEDDVKEVIEICNKLIFNSQSQLTAYRHLVEGKV-SVGLR 128

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP VSY+   LA+P R FSRLG +      +  + +NG+MFH NCENKS   FS++L  
Sbjct: 129 LNPGVSYAGQDLANPAREFSRLGVQADRLDTNVFEYINGVMFHMNCENKSVDAFSSLLDA 188

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I   FG ++  +EW+SLGGG+ FT  DY V      LK FS+K+ VQ+YLEPGEAI+T T
Sbjct: 189 ISVRFGTYLDTLEWVSLGGGVFFTWPDYDVDKLATVLKAFSDKHKVQLYLEPGEAIITKT 248

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299
             L  +V+DI EN K   IVDS+ EAH  D L+Y E A+I      G Y  ++   SCLA
Sbjct: 249 ADLVVSVVDIVENGKKTAIVDSATEAHRLDTLIYNEPASILEASEQGQYEYIIGSCSCLA 308

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F E  FE+P++IG ++   D AGY + + NWFN + MP++  +   G I  + EF Y
Sbjct: 309 GDQFCETQFEQPLQIGQKLHLLDSAGYTMVKLNWFNRLKMPSVYCERRSGKIDKLNEFDY 368

Query: 360 NDYYNNLS 367
           +D+  +LS
Sbjct: 369 SDFKRSLS 376


>gi|317505459|ref|ZP_07963377.1| carboxynorspermidine decarboxylase [Prevotella salivae DSM 15606]
 gi|315663372|gb|EFV03121.1| carboxynorspermidine decarboxylase [Prevotella salivae DSM 15606]
          Length = 413

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 113/374 (30%), Positives = 192/374 (51%), Gaps = 13/374 (3%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y++++ +L  NL+    + + A V+++LA K +A W  F    +Y+  TT+SSL E  
Sbjct: 40  PIYILEEARLRRNLNLIKDVAREADVEVILAFKAYALWKTFPIFREYIRATTASSLSEAR 99

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ--KLHKKIGLRI 122
           L  E+FG + H ++ AY D EID +      + FN+++Q  ++ ++ +       +GLRI
Sbjct: 100 LAFEEFGSKAHTFSPAYTDYEIDEIARLSSHLQFNSLTQYARYHERVRKENATISLGLRI 159

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           NP  S     L +P  P +R G       E+   ++ G   H +CE+     F   L++I
Sbjct: 160 NPEYSEVGTDLYNPCAPGTRFGITADKLPETLPADIEGFHCHCHCESG-AETFERTLQHI 218

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNT 241
           E +F  + +Q++WI+ GGG   T  DY        L++F ++Y   ++ LEPG A    T
Sbjct: 219 EAKFSRWFSQLKWINFGGGHLMTRNDYDTMLLVDVLQKFRQRYPWLKVILEPGSAFAWQT 278

Query: 242 TTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTG--------PYTAMV 292
             L + V+D+ E+     ++ + S   H+PD L       +             PY   +
Sbjct: 279 GPLVSQVVDVVEDRGIKTVILNVSFTCHMPDCLEMPYFPVVRGAKHIAQDNHHSPYIYRL 338

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352
            G SCL+GD  G + F+   ++G+ + FED+  Y   + N FNGI+ P I +  +DGT++
Sbjct: 339 GGNSCLSGDFMGYWEFDHAPQVGENVIFEDMLHYTTVKTNMFNGISHPAIGIARLDGTLE 398

Query: 353 AIREFSYNDYYNNL 366
            +RE+ Y DY+  +
Sbjct: 399 ILREYGYEDYHERM 412


>gi|163859235|ref|YP_001633533.1| hypothetical protein Bpet4914 [Bordetella petrii DSM 12804]
 gi|163262963|emb|CAP45266.1| lysA [Bordetella petrii]
          Length = 430

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 58/388 (14%), Positives = 123/388 (31%), Gaps = 26/388 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+  +  L     T         V +   +K  +   +     +   G    S  
Sbjct: 38  LGTPLYVYSRAALAQAWRTYSDAIGTRPVLVCYGMKANSNLAVLKEFARLGAGFDIVSGG 97

Query: 62  EVMLGHE--KFGGETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+           +     V  +  E+ A   +        + ++L    D AQ + ++ 
Sbjct: 98  ELKRVLAAGGNPAKVVFSGVGKQAWEMRAALEAGVKCFNVESQAELQCLSDVAQSMGQRA 157

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
              LR+NP V              ++ G   +  +++           + G+  H   + 
Sbjct: 158 RVSLRVNPDVDAQTHPYISTGLKENKFGIAIESALDAYRTAAALPGLEIVGVDCHIGSQL 217

Query: 170 KSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY- 225
                +   L+   ++ ++       I+ + LGGG+     D         L +  E+  
Sbjct: 218 TDISPYFDALEKLLDLIEQLDAAGIAIQHLDLGGGLGIRYTDEIPPSPKALLDQVFERLQ 277

Query: 226 -----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES- 278
                 + + LEPG ++V N   L TTV  +     +N  IVD+++   +   L      
Sbjct: 278 ARGMAHLHLVLEPGRSLVGNAGVLLTTVQYLKHAQARNFAIVDAAMNDLLRPALYDAYHG 337

Query: 279 --ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                  +       + G  C + D          ++ GD ++ E    Y +   + +N 
Sbjct: 338 VQPVAPRDGAAIEYDIVGPVCESADWLARQRKLA-LQAGDVLALESAGAYAMVMASNYNT 396

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364
                  + +        +  + +D   
Sbjct: 397 RARAAEVMVDGSRHYIVRQRETLDDLLR 424


>gi|315608072|ref|ZP_07883065.1| carboxynorspermidine decarboxylase [Prevotella buccae ATCC 33574]
 gi|315250541|gb|EFU30537.1| carboxynorspermidine decarboxylase [Prevotella buccae ATCC 33574]
          Length = 397

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 118/388 (30%), Positives = 195/388 (50%), Gaps = 24/388 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           IK P Y++++ +L  NL     + + A V+++LA K +A W  F    +Y+  TT+SSL+
Sbjct: 10  IKHPMYVLEEARLRRNLSLISSVAEAADVEIILAFKAYALWKTFPIFKEYIQATTASSLW 69

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--KIG 119
           E  LG+E+FG +TH ++ AY D EID +      + FN+++Q  ++  + + ++     G
Sbjct: 70  EARLGYEEFGSKTHTFSPAYTDDEIDEIARCSSHLTFNSLTQYERYHQRVRTVNSGISCG 129

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +RINP  S  + +L +P  P +R G +     E    ++ G   H  CE+     F   L
Sbjct: 130 IRINPEYSEVETLLYNPCAPGTRFGVRNALLPEKLPTDIEGFHCHTLCESG-ADVFRRTL 188

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238
            +IE +FG + +QI+WI+ GGG   T   Y +      L+EF  +Y   ++ LEPG A  
Sbjct: 189 THIEDKFGAWFSQIKWINFGGGHLMTRAGYDIDLLVATLREFHARYPWLKVVLEPGSAFA 248

Query: 239 TNTTTLNTTVLDI---SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT------ 289
             T  L + V+DI   ++      I++ S   H+PD L       +       +      
Sbjct: 249 WQTGELVSQVVDIVGGTDGEPTTAILNVSFTCHMPDCLEMPYHPRVRGAATLESEDVFLP 308

Query: 290 -----------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
                        + G SCL+GD    + F+ P++IG+ I FED+  Y   + N FNGI+
Sbjct: 309 QTTEDGGRSYVYRLGGNSCLSGDFMRSWAFDHPLQIGENIIFEDMLHYTTVKTNTFNGIS 368

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYNNL 366
            P I +   DG+++ +R +SY DY   +
Sbjct: 369 HPAIGLVRCDGSLEMLRTYSYADYKARM 396


>gi|288925034|ref|ZP_06418970.1| carboxynorspermidine decarboxylase [Prevotella buccae D17]
 gi|288338224|gb|EFC76574.1| carboxynorspermidine decarboxylase [Prevotella buccae D17]
          Length = 397

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 118/388 (30%), Positives = 195/388 (50%), Gaps = 24/388 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           IK P Y++++ +L  NL     + + A V+++LA K +A W  F    +Y+  TT+SSL+
Sbjct: 10  IKHPMYVLEEARLRRNLSLISSVAEAADVEIILAFKAYALWKTFPIFKEYIQATTASSLW 69

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--KIG 119
           E  LG+E+FG +TH ++ AY D EID +      + FN+++Q  ++  + + ++     G
Sbjct: 70  EARLGYEEFGSKTHTFSPAYTDDEIDEIARCSSHLTFNSLTQYERYHQRVRTVNSGISCG 129

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +RINP  S  + +L +P  P +R G +     E    ++ G   H  CE+     F   L
Sbjct: 130 IRINPEYSEVETLLYNPCAPGTRFGVRNALLPEKLPTDIEGFHCHTLCESG-ADVFRRTL 188

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238
            +IE +FG + +QI+WI+ GGG   T   Y +      L+EF  +Y   ++ LEPG A  
Sbjct: 189 THIEDKFGAWFSQIKWINFGGGHLMTRAGYDIDLLVATLREFHARYPWLKVVLEPGSAFA 248

Query: 239 TNTTTLNTTVLDI---SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT------ 289
             T  L + V+DI   ++      I++ S   H+PD L       +       +      
Sbjct: 249 WQTGELVSQVVDIVGGTDGEPTTAILNVSFTCHMPDCLEMPYHPRVRGAATLESEDGFLP 308

Query: 290 -----------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
                        + G SCL+GD    + F+ P++IG+ I FED+  Y   + N FNGI+
Sbjct: 309 QTAEDGGRSYVYRLGGNSCLSGDFMRSWAFDHPLQIGENIIFEDMLHYTTVKTNTFNGIS 368

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYNNL 366
            P I +   DG+++ +R +SY DY   +
Sbjct: 369 HPAIGLVRCDGSLEMLRTYSYADYKARM 396


>gi|13473029|ref|NP_104596.1| diaminopimelate decarboxylase [Mesorhizobium loti MAFF303099]
 gi|14023777|dbj|BAB50382.1| diaminopimelate decarboxylase [Mesorhizobium loti MAFF303099]
          Length = 422

 Score =  232 bits (592), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 64/388 (16%), Positives = 120/388 (30%), Gaps = 26/388 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +              +  A+K  +   +  TL +   G    S  
Sbjct: 25  VGTPFYCYSTATLTRHYRVFAQAFAGLDALVCYAMKANSNQAVLRTLARLGAGADVVSEG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKF--KDKAQKLHK 116
           E+              ++   K       A+ +        +  +L     +  A     
Sbjct: 85  ELRRALAAGIPASKILFSGVGKTAREIDLALEAGILCFNVESEPELELLSARAVALGKVA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            I LRINP V           +  ++ G   +   +   +        V G+  H   + 
Sbjct: 145 PISLRINPDVDAKTHKKISTGKAENKFGIAWQRARQVYARAATLPGIKVTGIDTHIGSQI 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221
                F      +             IE + LGGG+    +           + Q +++ 
Sbjct: 205 TELQPFDDAFALLVDLVGALRADGHAIEHVDLGGGLGIPYRVDNNPPPLPDAYAQIVRKH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
             K  +++  EPG  IV N   L + V+ + E + KN ++VD+++   +   L       
Sbjct: 265 VTKLGLKVMFEPGRLIVGNAGILVSEVIFVKEGDAKNFLVVDAAMNDLIRPTLYDAFHDI 324

Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                 P         V G+ C  GD  G       +K GD ++      Y   +   +N
Sbjct: 325 RPVVQPPADTPRMMVDVVGQVCETGDYLGLDRDLPRLKAGDLVAVSTAGAYGAVQAGTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY 363
              +    + + D         +Y+D  
Sbjct: 385 TRLLVPEVLVDGDRFHIVRPRLTYDDLI 412


>gi|50085728|ref|YP_047238.1| diaminopimelate decarboxylase [Acinetobacter sp. ADP1]
 gi|49531704|emb|CAG69416.1| diaminopimelate decarboxylase [Acinetobacter sp. ADP1]
          Length = 416

 Score =  232 bits (592), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 61/386 (15%), Positives = 124/386 (32%), Gaps = 24/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  K     +             ++  A+K  +   + + L +   G    +  E
Sbjct: 25  GTPLYVYSKAAFEKHYKDMDRAFDFIDHQICFAVKSNSNLAVLNVLAKLGSGFDIVTGGE 84

Query: 63  VMLGH-EKFGGETHAYNV-AYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +              ++     + +   A+          + ++L++ +  A +L +   
Sbjct: 85  LARVLAAGGDPSKIVFSGLGKSEADIQKALEVGIACFNVESYAELDRIQKVAVRLDQKAP 144

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNC--- 167
           + LR+NP V              ++ G                   +V G+  H      
Sbjct: 145 VSLRVNPDVDAKTHPYISTGLKENKFGIPSDTVFETYQYAASLSHLDVVGIDCHIGSQLT 204

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224
           E K F+     +  + ++       ++ I +GGG+    KD       ++   LK   EK
Sbjct: 205 ETKPFVDALDRVMVMIEQLNKLGINLKHIDIGGGLGVCYKDETPPSVAEYANALKPALEK 264

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++Y+EPG +I  N   L T V L    N +N  I+D+++   +   L          
Sbjct: 265 LGLKVYMEPGRSISANAGVLLTRVDLLKPTNHRNFAIIDAAMNDLIRPSLYEAWMDIQSV 324

Query: 284 NT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
           N           V G  C  GD  G+      ++  D ++      Y     + +N    
Sbjct: 325 NESTSAEAKEWDVVGAICETGDFLGKARTLA-IQENDILAVLGAGAYGFVMSSNYNTRGR 383

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365
               + + +         S    +  
Sbjct: 384 AAEVMVDDEKPHLIRERESIESLWER 409


>gi|323705134|ref|ZP_08116710.1| diaminopimelate decarboxylase [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323535560|gb|EGB25335.1| diaminopimelate decarboxylase [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 445

 Score =  232 bits (592), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 75/400 (18%), Positives = 134/400 (33%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ID++ L  N  +     K    G +++ A K F    +   + +   G    S 
Sbjct: 29  GTPLYVIDEELLRENCRSFYNGFKKNYPGNEVIYASKAFMTTAICKIIEEENLGLDVVSG 88

Query: 61  YEVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F  +   ++   K  D    A+  N   II +   +LN   + A      
Sbjct: 89  GELYTALKADFPVQNIYFHGNNKSIDELTMALEYNIGCIIVDNWFELNMLNELALKMGKK 148

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I LRI+P V           +  S+ G         +  K  +  +  N+ GL  H  
Sbjct: 149 PNIYLRISPGVEAHTHEYIKTGQIDSKFGFPLFNGDALDAIKYALTLDNVNLTGLHCHIG 208

Query: 167 CENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            +  S+  + A +  +             ++E + LGGG      +       + +    
Sbjct: 209 SQIFSYDSYKAEIDIMMNFLKKVKDTTGWEVENLDLGGGFGIAYVEEDDPQPIELIASEI 268

Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            K               I +EPG +I+ N  T   TV  I         V     +  ++
Sbjct: 269 MKTVEEFSKELNIKRPNIIVEPGRSIIGNAGTTLYTVGAIKNIPGVRKYVSVDGGMADNI 328

Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   I  N           + G+ C +GD+         ++ GD I+      
Sbjct: 329 RTALYGAKYNAIVANKARKINLEKVSIAGKCCESGDMLIWDIDLPQLESGDIIAVTCTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           YN +  + +N +  P   + N   +   +   +Y+D   N
Sbjct: 389 YNYSMASNYNRLPRPAAVLLNNGESDLIVARETYDDLIKN 428


>gi|16272667|ref|NP_438885.1| diaminopimelate decarboxylase [Haemophilus influenzae Rd KW20]
 gi|260579819|ref|ZP_05847649.1| diaminopimelate decarboxylase [Haemophilus influenzae RdAW]
 gi|1169235|sp|P44316|DCDA_HAEIN RecName: Full=Diaminopimelate decarboxylase; Short=DAP
           decarboxylase
 gi|1573731|gb|AAC22385.1| diaminopimelate decarboxylase (lysA) [Haemophilus influenzae Rd
           KW20]
 gi|260093103|gb|EEW77036.1| diaminopimelate decarboxylase [Haemophilus influenzae RdAW]
          Length = 415

 Score =  232 bits (592), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 60/384 (15%), Positives = 116/384 (30%), Gaps = 25/384 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         N    +  A+K  +  G+ + + +   G    S  E
Sbjct: 26  GTPLYVYSRATLERHWHAFDSAFGNRPHLICFAVKSCSNIGVLNIMAKLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +              ++     ++  + A+          +VS+L      A        
Sbjct: 86  LERVLAAGGDASKVVFSGVAKSREEIMRALEVRIRCFNVESVSELKHINQIAGEMGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G    +  E            + G+  H   +  
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVNEAREVYKLASTLPNIKITGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F         + ++       ++ + LGGG+  T       +P       L++   
Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGLGVTYTDETPPHPSDYANALLEKLKN 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
              ++I LEPG AI  N   L   V  +     +N  I D+ +   +   L       + 
Sbjct: 266 YPELEIILEPGRAISANAGILVAKVQYLKSNESRNFAITDTGMNDMIRPALYEAYMNIVE 325

Query: 283 PNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +           V G  C   D  G+      +  GD I+      Y  +  + +N   
Sbjct: 326 IDRTLEREKAIYDVVGPVCETSDFLGKQRELS-IAEGDYIAQCSAGAYGASMSSNYNSRA 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362
                + + D +    R  +  + 
Sbjct: 385 RTAEVLVDGDQSYLIRRRETLQEL 408


>gi|16126452|ref|NP_421016.1| diaminopimelate decarboxylase [Caulobacter crescentus CB15]
 gi|221235233|ref|YP_002517669.1| diaminopimelate decarboxylase [Caulobacter crescentus NA1000]
 gi|13423716|gb|AAK24184.1| diaminopimelate decarboxylase [Caulobacter crescentus CB15]
 gi|220964405|gb|ACL95761.1| diaminopimelate decarboxylase [Caulobacter crescentus NA1000]
          Length = 421

 Score =  232 bits (592), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 66/390 (16%), Positives = 123/390 (31%), Gaps = 26/390 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSS 58
           + TP Y+  +  L  +          +GV    +  A+K  +   +   L     G  + 
Sbjct: 25  VGTPVYVYSRATLERHFVVFRDALAMSGVVDPLIAYAVKANSNVAVLKVLGDLGAGADTV 84

Query: 59  SLYEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL- 114
           S  EV         GE   ++   K     A    +    I   +  +LN   + A +L 
Sbjct: 85  SEGEVRRALAAGIPGERIVFSGVGKARREIAFALQAGVAEINVESEPELNLIAEVAAELG 144

Query: 115 -HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNN 166
              K+  R+NP V+          +  ++ G    +                 G+  H  
Sbjct: 145 VRAKVAFRVNPDVAAGGHAKIATGKSENKFGVSFAEAARLYANASNNANLQPVGVACHIG 204

Query: 167 CENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKD----FCQRLK 219
            +        A    +             +E + LGGG+     ++P       F   + 
Sbjct: 205 SQITDLAPMRAAFTKMRGLVEQLLAEGLSVERLDLGGGLGVPYFNHPEPPSPAEFAAMVG 264

Query: 220 EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDYLLYQE 277
           E ++   V +  EPG  I  N   L + V+ + E  +      +D+++   V   +    
Sbjct: 265 EVTQGLPVTLAFEPGRVIAANAGVLVSEVIHVHERPEGRKFLVIDAAMNDLVRPAMYDAF 324

Query: 278 SA--TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                +   TG     V G  C  GD F       P   GD ++F     Y     + +N
Sbjct: 325 HDIRPVIQRTGETVYDVVGPVCETGDTFTRDRALPPFAAGDLVAFMSAGAYGAAMASEYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              +    + + D      +  +Y++    
Sbjct: 385 TRPLVPEVLVDGDRYAVIRQRPTYDEMLAR 414


>gi|124485458|ref|YP_001030074.1| diaminopimelate decarboxylase [Methanocorpusculum labreanum Z]
 gi|124362999|gb|ABN06807.1| diaminopimelate decarboxylase [Methanocorpusculum labreanum Z]
          Length = 433

 Score =  232 bits (592), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 77/393 (19%), Positives = 133/393 (33%), Gaps = 33/393 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ ++  +  N        K     V+LL A K      +  +L +   G    SL
Sbjct: 29  GTPLYVTNENHVTGNFRRYEAALKKYTNNVQLLYAAKANENPVIIQSLAREGAGADIFSL 88

Query: 61  YEVMLGHEKFGGETH--AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116
            E+    E             +  + ++ A +     I  ++V +L +     ++L K  
Sbjct: 89  GEMRAALEAGIPAGILLFNGSSKTEADLRAAIEKDIMISVDSVDELRQIDAITKELKKTA 148

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV-------NGLMFHNNCEN 169
           KIG R+NP++              S+ G   +  +E+  + +        G+  H   + 
Sbjct: 149 KIGFRVNPAIEVPTHPKIATGIKNSKFGIPAEMILEAYREALSMEYVVPVGMHCHIGSQI 208

Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDY--------PVKDFCQRL 218
                F+     I K  G       ++E+I  GGG+               P +     +
Sbjct: 209 LEVEPFAIACGVIMKVAGEVTKIGVKLEFIDFGGGLGIPYHREGTVDKAPTPEEYAAAVM 268

Query: 219 KEFSEKYS-----VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL 273
             F E           ++EPG  +V  +T L T V  + +  K  V VD+     +   +
Sbjct: 269 PVFLEGCKKAGISPAFWVEPGRWMVGESTILLTRVNSVKKVHKTFVNVDAGFNLLIRPAM 328

Query: 274 LYQESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
                  +  N        T  + G  C  GDIFG       V  GD I+  D   Y  +
Sbjct: 329 YDSWHEVVVANKADQPADGTYTITGPICETGDIFGSDRALPSVVAGDLIAVLDAGAYGYS 388

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
             + +N        + N D      R  +Y + 
Sbjct: 389 MSSQYNSRPRCPEVLVNGDKAELMRRAETYEEM 421


>gi|331005625|ref|ZP_08328994.1| Diaminopimelate decarboxylase [gamma proteobacterium IMCC1989]
 gi|330420550|gb|EGG94847.1| Diaminopimelate decarboxylase [gamma proteobacterium IMCC1989]
          Length = 417

 Score =  232 bits (592), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 56/386 (14%), Positives = 117/386 (30%), Gaps = 25/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +     +         +    +  A+K  +   + + L +   G    S+ E
Sbjct: 26  GTPAYVYSRAAFTQHYCEYRDALGDHPGMICYAVKANSNIAVLNVLAKLGSGFDIVSIGE 85

Query: 63  V-MLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +  +       +   ++   K       A+          ++ +L++ +  A+ +     
Sbjct: 86  LERVIQAGGDPQRIVFSGVAKTEGEMRRALELGVYCFNIESIPELSRLQTVAESMGVQAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           I LR+NP V              ++ G      +E            + G+  H   +  
Sbjct: 146 ISLRVNPDVDAETHPYISTGLKENKFGVDIDHAVEIYQHAATLPNLTIKGVDCHIGSQLT 205

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224
           S   F   L  +     +       IE + LGGG+     D       D+   +K     
Sbjct: 206 SVAPFLDALDRVLALIDQLAEQGIIIEHLDLGGGLGVVYNDEQPPKIGDYIDEVKRRIAG 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIYP 283
            ++ +  EPG +I  N   L T V  +         I+D+ +  ++   L       +  
Sbjct: 266 RNLSLSFEPGRSIAANAGVLLTKVEFLKPTEHKNFAIIDAGMNDNIRPSLYRAWQKVLPV 325

Query: 284 NTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
                        + G  C  GD   +      +  GD ++      Y     + +N   
Sbjct: 326 TETKADTATELWDLVGPVCETGDFLAKDRELA-LDEGDYLALMSSGAYGFTMSSNYNSRG 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364
                + + D +    +  +  D   
Sbjct: 385 RAIEIMVDGDKSHIIRQRETVADLVK 410


>gi|229844596|ref|ZP_04464735.1| diaminopimelate decarboxylase [Haemophilus influenzae 6P18H1]
 gi|229812310|gb|EEP48000.1| diaminopimelate decarboxylase [Haemophilus influenzae 6P18H1]
          Length = 415

 Score =  232 bits (592), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 61/384 (15%), Positives = 116/384 (30%), Gaps = 25/384 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +  G+ + + +   G    S  E
Sbjct: 26  GTPLYVYSRATLERHWHAFDSAFGKRPHLICFAVKSCSNIGVLNIMAKLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +              ++     ++  + A+          +VS+L      A        
Sbjct: 86  LERVLAAGGDASKVVFSGVAKSREEIMRALEVGIRCFNVESVSELKHINQIAGEMGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G    +  E            + G+  H   +  
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVDEAREVYKLASTLPNIKITGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F         + ++       ++ + LGGG+  T       +P       L++   
Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGLGVTYTDETPPHPSDYANALLEKLKN 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
              ++I LEPG AI  N   L   V  +     +N  I D+ +   +   L       I 
Sbjct: 266 YPELEIILEPGRAISANAGILVAKVQYLKSNESRNFAITDTGMNDMIRPALYEAYMNIIE 325

Query: 283 PNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +           V G  C   D  G+      +  GD I+    A Y  +  + +N   
Sbjct: 326 IDRTLEREKAIYDVVGPVCETSDFLGKQRELS-IAEGDYIAQCSAAAYGASMSSNYNSRA 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362
                + + D +    R  +  + 
Sbjct: 385 RTAEVLVDGDQSYLIRRRETLQEL 408


>gi|262369521|ref|ZP_06062849.1| diaminopimelate decarboxylase [Acinetobacter johnsonii SH046]
 gi|262315589|gb|EEY96628.1| diaminopimelate decarboxylase [Acinetobacter johnsonii SH046]
          Length = 416

 Score =  232 bits (592), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 64/389 (16%), Positives = 127/389 (32%), Gaps = 26/389 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  K     +             ++  A+K  +   + + L +   G    +  E
Sbjct: 25  GTPLYVYSKATFEKHFTEMDRAFDFIDHQICFAVKSNSNIAVLNVLAKLGAGFDIVTGGE 84

Query: 63  VMLGH-EKFGGETHAYNV-AYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++     + +   A+          + ++L++ +  A KL     
Sbjct: 85  LARVLKAGGDASKIVFSGLGKTEIDVQKALEVGIACFNVESHAELDRIQKVAAKLGKKAP 144

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNC--- 167
           I LR+NP V              ++ G       E+          ++ G+  H      
Sbjct: 145 ISLRVNPDVDAKTHPYISTGLKENKFGIPSDTVFETYQYAATLPNLDIIGIDCHIGSQLT 204

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
           E + F+     +  +  +      Q++ I +GGG+  T KD     V ++   +K   EK
Sbjct: 205 ETQPFVDALDRVIVMIDQLKTMGIQLKHIDIGGGLGVTYKDEVPPTVFEYANAMKPALEK 264

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQES----A 279
             +++Y+EPG +I  N   L T V L      +N  I+D+++   +   L          
Sbjct: 265 LGLKVYMEPGRSISANAGVLLTKVDLLKPTIHRNFAIIDAAMNDLIRPALYEAWMDIQPV 324

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
           T   +       V G  C  GD  G+      +K  D ++      Y     + +N    
Sbjct: 325 TPRSDVEAKEWDVVGAICETGDFLGKERLLA-LKENDVLAVLGAGAYGFVMSSNYNSRGR 383

Query: 340 PTIAVKNVDGTIKAIREFSYNDY--YNNL 366
               + + +         +         L
Sbjct: 384 AAEVMVDGENAHLIRERETIESLWDKERL 412


>gi|220931558|ref|YP_002508466.1| diaminopimelate decarboxylase [Halothermothrix orenii H 168]
 gi|219992868|gb|ACL69471.1| diaminopimelate decarboxylase [Halothermothrix orenii H 168]
          Length = 448

 Score =  232 bits (592), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 65/400 (16%), Positives = 127/400 (31%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D+ ++       +          + + A K F    +   + +   G    S 
Sbjct: 30  GTPLLVFDEWEIRKKAREYVKAFNKYYPNSRTVYASKAFLNQALCYIIEEEGLGLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+ +     F  E   ++   K       AV +     + + + +       A +L K 
Sbjct: 90  GELYIALKAGFPPEKIFFHGNNKSNAEIKMAVEAGIGRFMLDNLKEARYINKVAGRLEKS 149

Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNN 166
           I   LR+ P +           +  S+ G            ++ I  +   + G+  H  
Sbjct: 150 IKAILRVTPGIEAHTHEFIQTGQIDSKFGVSVYRDQALKAIEEIIRMDNIELTGVHVHIG 209

Query: 167 CENKSF----LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRL 218
            +  +          M + +          ++ + LGGG+         D  + ++ + +
Sbjct: 210 SQIFNLTSFSRTIDVMFEFMNNVRDKTGYILKELDLGGGLGIPYTEDEPDPGIDEYARLV 269

Query: 219 KEFSEKYSVQI-------YLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269
            E   + S +          EPG +I+    T   TV  + E         VD  +  ++
Sbjct: 270 SEKVREKSHEFDYPLPVIINEPGRSIIGTAGTTLYTVGTVKEIPFIRKYLAVDGGMTDNI 329

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   E     A    +       + G+ C +GDI          + GD I+      
Sbjct: 330 RPALYGAEYDAILANRADDEREEIVSIAGKCCESGDILIHDIKMPEAREGDIIAIPCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y     + +NG+  P + + N       I+  SY D   N
Sbjct: 390 YTYAMSSNYNGLRRPAVVLVNDGNADLIIKRESYEDLIKN 429


>gi|89074449|ref|ZP_01160926.1| putative diaminopimelate decarboxylase [Photobacterium sp. SKA34]
 gi|89049737|gb|EAR55287.1| putative diaminopimelate decarboxylase [Photobacterium sp. SKA34]
          Length = 416

 Score =  232 bits (592), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 62/383 (16%), Positives = 112/383 (29%), Gaps = 24/383 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +  G+ + L +   G    S  E
Sbjct: 27  GTPLYVYSRATLERHWKAFDEAVATHPHLICYAVKANSNLGVLNVLARLGSGFDIVSQGE 86

Query: 63  V-MLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +  +           ++   K       A+          +  +L +    A++L     
Sbjct: 87  LERVIAAGGDPAKVVFSGVGKTAAEMKRALELGIKCFNVESEPELERLNAVAEELGVTAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCE-- 168
           I LRINP V              ++ G      +E            V G+  H   +  
Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGIVFDRAVEVYRLAHSLPHLQVVGMDCHIGSQLT 206

Query: 169 -NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSE 223
               F+  +  L  +  E       I+ + LGGG+  T  D     P       L     
Sbjct: 207 DITPFIDATDRLLALVDELKAEGIHIQHLDLGGGLGVTYNDEQPPQPSDYASALLARLEN 266

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279
              +++  EPG AI  N   L T V  +         IVD+++   +   L         
Sbjct: 267 YPDLELIFEPGRAIAANAGVLLTKVEFLKHTEHKNFAIVDAAMNDLIRPTLYSAWQDIVP 326

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                   +   + G  C  GD  G+      +  GD ++      Y     + +N    
Sbjct: 327 VSPRQGEAHVYDLVGPICETGDFIGKDRSLC-LAQGDLLAVRSAGAYGFVMASNYNTRAR 385

Query: 340 PTIAVKNVDGTIKAIREFSYNDY 362
               + + +         +    
Sbjct: 386 AAEIMVDGEQAHVVRERETLTQL 408


>gi|187251103|ref|YP_001875585.1| diaminopimelate decarboxylase [Elusimicrobium minutum Pei191]
 gi|186971263|gb|ACC98248.1| Diaminopimelate decarboxylase [Elusimicrobium minutum Pei191]
          Length = 417

 Score =  232 bits (591), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 65/385 (16%), Positives = 133/385 (34%), Gaps = 22/385 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+   + L  N        K     +  ++K  +  G+  T+     G    S  
Sbjct: 23  VGTPCYIYSNEILTKNFKDFDNALKKFKNTISYSIKANSNLGIVKTIASLGGGADVVSAG 82

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HK 116
           E+ +            ++   K           +   I   + +++N     A KL    
Sbjct: 83  EMCIALKAGIPANKIVFSGVGKTKRELEEAIKNEILQINAESEAEVNTINHIALKLGKKA 142

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCEN 169
            I LR+NP V     +     +  ++ G              + E  NV G+  H   + 
Sbjct: 143 NIALRVNPDVDAKTHVKITTGKKENKFGVDWDIAKDLYIKASKMEGLNVVGIAMHIGSQL 202

Query: 170 KSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSE 223
                F      + ++  E       ++ + LGGG+            + + Q ++E   
Sbjct: 203 LDLDPFRLAFTKMADMVSELEKEGIILKNLDLGGGLGINYNVELPPTKEAYAQVIEETLG 262

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
           K++  I +EPG +I+     L + V+       K+ +IVD+ +   +   +       + 
Sbjct: 263 KFNKHIIIEPGRSIIGEAAILISEVIFTKDMGSKHFIIVDAGMNDLMRPAMYDSWHTIVP 322

Query: 283 PNTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                  P TA + G  C + D F +    +PVK G+ ++      Y  +  + +N   +
Sbjct: 323 VVKKGLAPITADIVGPICESSDTFAKDRIIEPVKQGELVAMMSAGAYGSSMSSVYNFRPL 382

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
               + N +      +  +Y +  +
Sbjct: 383 VPEVMVNKNAFTVVRKRTTYEEMLS 407


>gi|262376587|ref|ZP_06069815.1| diaminopimelate decarboxylase [Acinetobacter lwoffii SH145]
 gi|262308297|gb|EEY89432.1| diaminopimelate decarboxylase [Acinetobacter lwoffii SH145]
          Length = 414

 Score =  232 bits (591), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 62/386 (16%), Positives = 127/386 (32%), Gaps = 24/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  K  L  +             ++  A+K  +   + + L +   G    +  E
Sbjct: 25  GTPLYVYSKATLEKHFLDMDRAFNFIDHQICFAVKSNSNLAVLNVLAKQGAGFDIVTGGE 84

Query: 63  VMLGH-EKFGGETHAYNV-AYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLH--KK 117
           +              ++     + +   A+          + ++L++ +  A +L+    
Sbjct: 85  LARVLKAGGEPSKIVFSGLGKSEADIKKALEVGIACFNVESYAELDRIQKVAAELNVKAP 144

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNC--- 167
           I LR+NP V              ++ G       E+          +V G+  H      
Sbjct: 145 ISLRVNPDVDAKTHPYISTGLKENKFGIPSDSVFETYQYAASLPNLDVVGIDCHIGSQLT 204

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224
           E + F+     +  +  +       ++ I +GGG+  T KD       ++   L+   EK
Sbjct: 205 ETQPFVDALDRVIVMIDQLKEMGIHLKHIDIGGGLGVTYKDETPPSVEEYANALRPALEK 264

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQES----A 279
             +++Y+EPG +I  N   L T V L    N +N  I+D+++   +   L          
Sbjct: 265 LGLKVYMEPGRSISANAGVLLTKVDLLKPTNHRNFAIIDAAMNDLIRPALYEAWMDIQPV 324

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
               +       + G  C  GD  G+      +K  D ++      Y     + +N    
Sbjct: 325 RPRTDAETKEWDIVGAICETGDFLGKERELA-IKENDVLAVLGAGAYGFVMSSNYNSRGR 383

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365
               + + D         +    +  
Sbjct: 384 AAEVMVDADQAHLIRERETIESLWER 409


>gi|260556500|ref|ZP_05828718.1| diaminopimelate decarboxylase [Acinetobacter baumannii ATCC 19606]
 gi|260409759|gb|EEX03059.1| diaminopimelate decarboxylase [Acinetobacter baumannii ATCC 19606]
          Length = 416

 Score =  232 bits (591), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 62/389 (15%), Positives = 121/389 (31%), Gaps = 26/389 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  K     +             ++  A+K  +   + + L +   G    S  E
Sbjct: 25  GTPLYVYSKAAFEKHYLDMDRAFDFIDHQICFAVKSNSNIAVLNVLAKLGAGFDIVSGGE 84

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++   K         N         + ++L++ +  A +L     
Sbjct: 85  LARVLKAGGDASKIVFSGLGKTEADIETSLNVGIACFNVESYAELDRIQKVAARLGKKAP 144

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNC--- 167
           I LR+NP V              ++ G                    + G+  H      
Sbjct: 145 ISLRVNPDVDAKTHPYISTGLKENKFGIPSDAVYETYQYAASLPNLEIVGIDCHIGSQLT 204

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224
           E K F+     +  +  E       ++ I +GGG+    KD       ++   +K   EK
Sbjct: 205 ETKPFVDALDRVIVMIDELKKLGINLKHIDIGGGLGVCYKDETPPSVEEYANSMKPALEK 264

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQES----A 279
             +++Y+EPG +I  N   L T V L      +N  I+D+++   +   L          
Sbjct: 265 LGLKVYMEPGRSISANAGVLLTKVDLLKPTTHRNFAIIDAAMNDLIRPALYEAWMDIQPV 324

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
               +T   T  + G  C  GD  G+      ++  D ++      Y     + +N    
Sbjct: 325 VPRTDTVEKTWDLVGAICETGDFIGKDRSLA-LQENDLLTVLGAGAYGFVMSSNYNTRGR 383

Query: 340 PTIAVKNVDGTIKAIREFSYNDY--YNNL 366
               + + + +       +         L
Sbjct: 384 AAEVMVSGEKSYLIRERETVESLWEKERL 412


>gi|262278116|ref|ZP_06055901.1| diaminopimelate decarboxylase [Acinetobacter calcoaceticus RUH2202]
 gi|262258467|gb|EEY77200.1| diaminopimelate decarboxylase [Acinetobacter calcoaceticus RUH2202]
          Length = 416

 Score =  232 bits (591), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 64/389 (16%), Positives = 121/389 (31%), Gaps = 26/389 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  K     +             ++  A+K  +   + + L +   G    S  E
Sbjct: 25  GTPLYVYSKTAFEKHYLDMDRAFDFIDHQICFAVKSNSNLAVLNVLAKLGAGFDIVSGGE 84

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++   K         N         + ++L++ +  A +L     
Sbjct: 85  LARVLKAGGDASKVVFSGLGKTEADIETSLNVGIACFNVESYAELDRLQKVAARLGKKAP 144

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNC--- 167
           I LR+NP V              ++ G                    + G+  H      
Sbjct: 145 ISLRVNPDVDAKTHPYISTGLKENKFGIPSDTVYETYQYAASLPNLEIIGIDCHIGSQLT 204

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224
           E K F+     +  +  E       ++ I +GGG+    KD       ++   +K   EK
Sbjct: 205 ETKPFVDALDRVMVMIDELKKLGINLKHIDIGGGLGVCYKDETPPSVEEYANSMKPALEK 264

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQES----A 279
             +++Y+EPG +I  N   L T V L    + +N  I+D+++   +   L          
Sbjct: 265 LGLKVYMEPGRSISANAGVLLTKVDLLKPTSHRNFAIIDAAMNDLIRPALYEAWMDIQPV 324

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
               +T   T  + G  C  GD  G+      +K  D ++      Y     + +N    
Sbjct: 325 VPSTDTEEKTWDLVGAICETGDFIGKDRSLA-LKENDLLAVLGAGAYGFVMSSNYNTRGR 383

Query: 340 PTIAVKNVDGTIKAIREFSYNDY--YNNL 366
               + + D         +         L
Sbjct: 384 AAEVMVSGDKAHLIRERETVESLWEKERL 412


>gi|33594789|ref|NP_882432.1| diaminopimelate decarboxylase [Bordetella parapertussis 12822]
 gi|33599061|ref|NP_886621.1| diaminopimelate decarboxylase [Bordetella bronchiseptica RB50]
 gi|33564865|emb|CAE39809.1| diaminopimelate decarboxylase [Bordetella parapertussis]
 gi|33575107|emb|CAE30570.1| diaminopimelate decarboxylase [Bordetella bronchiseptica RB50]
          Length = 429

 Score =  232 bits (591), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 60/388 (15%), Positives = 122/388 (31%), Gaps = 26/388 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+  +  L +  +T         V +   +K  +   +     +   G    S  
Sbjct: 37  LGTPLYVYSRAALRSAWETYRDAIGERPVLVCFGMKANSNLAVLKEFARLGAGFDIVSGG 96

Query: 62  EVMLGHE-KFGGETHAYNV-AYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
           E+              ++    +  E+ A L          + ++L +  D A  + ++ 
Sbjct: 97  ELARVLAVGGDPAKVVFSGVGKQAWEMRAALEADVKCFNVESEAELERLSDVAVSMGRRA 156

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNCEN 169
              LR+NP V              ++ G   +    +           V G+  H   + 
Sbjct: 157 RVSLRVNPDVDAQTHPYISTGLKENKFGIAIESAPAAYRLAARLPGVEVVGVDCHIGSQL 216

Query: 170 KSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY- 225
                +   L+   ++ ++       I+ + LGGG+     D         L    E+  
Sbjct: 217 TDISPYFDALEKLLDLIEQLAENGIAIKHLDLGGGLGIRYTDEIPPSPKALLDRVFERIN 276

Query: 226 -----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES- 278
                 + I LEPG ++V N   L TTV  +     +N  IVD+++   +   L      
Sbjct: 277 ARGLGHLHIVLEPGRSLVGNAGVLLTTVQYLKHAEARNFAIVDAAMNDLLRPALYEAYHG 336

Query: 279 --ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                          V G  C + D          ++ GD ++ E    Y++   + +N 
Sbjct: 337 VQPVTPRADKRIEYDVVGPVCESADWLARGRALA-IQAGDVLAVESAGAYSMVMASNYNT 395

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364
                  + + +      +  +    Y 
Sbjct: 396 RVRAAEVMVDGNRHYIVRQRETLESLYQ 423


>gi|91791757|ref|YP_561408.1| diaminopimelate decarboxylase [Shewanella denitrificans OS217]
 gi|91713759|gb|ABE53685.1| diaminopimelate decarboxylase [Shewanella denitrificans OS217]
          Length = 414

 Score =  232 bits (591), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 56/377 (14%), Positives = 112/377 (29%), Gaps = 23/377 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +   + + L +   G    S  E
Sbjct: 26  GTPVYIYSRATLERHWRAFDDAVGTHPHLICYAVKANSNLAVLNVLARLGSGFDIVSGGE 85

Query: 63  -VMLGHEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
              +       +   ++   K  +    A+          + ++L +    AQ L+    
Sbjct: 86  LARVIEAGGDPKKVVFSGVGKTVEEMQQALELGIYCFNVESSAELEQLNLVAQSLNTKAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           + LRINP V              ++ G   ++  +           +V G+  H   +  
Sbjct: 146 VSLRINPDVDAGTHPYISTGLKENKFGIAMEEAEQVFVRAAALSHIDVKGVDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
               F   +     +         ++  + +GGG+     +      + +   L E   +
Sbjct: 206 ELKPFLDAMDRLLGLVDRLTALGIELSHLDVGGGLGVPYDNETPPAPQVYAAALVERLGE 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQE---SAT 280
             + +  EPG AI  N     T VL +   + K   IVD ++   +   L          
Sbjct: 266 RKLTLIFEPGRAIAANAGIFVTQVLYLKENSNKRFAIVDGAMNDLLRPALYSAWQKIIPV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              +       + G  C  GD  G+      V  GD ++      Y     + +N     
Sbjct: 326 QQSDAATQAFDIVGPVCETGDFLGKDRQLA-VVAGDLLAIRSCGAYGFAMSSNYNSRPRV 384

Query: 341 TIAVKNVDGTIKAIREF 357
              + +           
Sbjct: 385 AEIMVDGSQAFVVRERE 401


>gi|303256483|ref|ZP_07342497.1| diaminopimelate decarboxylase [Burkholderiales bacterium 1_1_47]
 gi|302859974|gb|EFL83051.1| diaminopimelate decarboxylase [Burkholderiales bacterium 1_1_47]
          Length = 437

 Score =  232 bits (591), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 57/388 (14%), Positives = 118/388 (30%), Gaps = 27/388 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  KQ ++N   +     +     +  A+K  +   +   L +   G    S  E
Sbjct: 33  GTPLYVYSKQAIVNAFQSYQKPLEPYKHLMCFAVKANSNLSIIRLLGKLGAGFDIVSEGE 92

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++   K         + D       + ++L++    AQK  KK  
Sbjct: 93  LRRIQAAGCDTSKVIFSGVAKTYHEIEAALDADIKCFNIESPAELDRVIAVAQKKGKKAR 152

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170
              R+NP V              ++ G      +        S    V G+  H   +  
Sbjct: 153 VSFRVNPDVDAKTHPYISTGLKKNKFGIAYDQAVELYLKASRSPELEVVGIDCHIGSQIT 212

Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSE 223
               F    + +             ++ I  GGG+     +     P        +   +
Sbjct: 213 DTAPFVDACEKLCTLLDKLRLNGIDLQHIDFGGGLGIQYSNEAVPSPTVLVAALRRALVK 272

Query: 224 KYS--VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS-VEAHVPDYLLYQES-- 278
           +     ++  E G ++V N+  L  TV  + +       +    +   +   L       
Sbjct: 273 RGYGDKEMIFEAGRSLVGNSGALLMTVQYMKQGELKNFCIVDCGMNDMIRPTLYQAWMQI 332

Query: 279 -ATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                   G  T   V G  C  GD  G+      V+ GD ++      Y ++  + +N 
Sbjct: 333 VPVTPKKEGKETYCYVVGPVCETGDWLGKDRLL-NVQEGDLMALLSAGAYGMSMASNYNS 391

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +P   + + +  +   +     + ++
Sbjct: 392 RCLPAEVLVDGNKAVLIRKRQRAEELFS 419


>gi|237809856|ref|YP_002894296.1| diaminopimelate decarboxylase [Tolumonas auensis DSM 9187]
 gi|237502117|gb|ACQ94710.1| diaminopimelate decarboxylase [Tolumonas auensis DSM 9187]
          Length = 416

 Score =  232 bits (591), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 57/378 (15%), Positives = 113/378 (29%), Gaps = 24/378 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +  +         +    +  A+K      + + L +   G    S  E
Sbjct: 27  GTPLYIYSRATIERHWKAFDAAAGDVPHLICYAVKANGNLAILNLLARLGSGFDIVSGGE 86

Query: 63  -VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
              +       +   ++   K  E        D       +  +L +    A  + K   
Sbjct: 87  LARVIAAGGDAKKVVFSGVGKTEEEMRYALGQDILCFNVESEPELERLNQVAGSMGKVAR 146

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
             +RINP +              ++ G   +   E            + G+  H   +  
Sbjct: 147 ISIRINPDIDAGTHPYISTGLKQNKFGIPIERAPEVYRYAASLPNLQITGVDCHIGSQLT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEK 224
               F   +     +  E      +I  + +GGG+     D       +    LK+  + 
Sbjct: 207 EISPFLEAVDKLLALIDELSAAGIKIHHLDVGGGLGVNYNDETPPHPSEYALALKQKLQD 266

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + +  EPG AI+ N   L T V  +     ++  IVD+++   +   L       I  
Sbjct: 267 RDLTLMFEPGRAIMANAGILATKVEYLKAGEDRHFAIVDAAMNDLIRPSLYSAWMNIIPV 326

Query: 284 NTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
           N       +   V G  C  GD  G+      +  GD +       Y  +  + +N  + 
Sbjct: 327 NRSLPRDAHHYDVVGPICETGDFLGKDRELA-IAPGDYLVVRSAGAYGFSMASNYNARSR 385

Query: 340 PTIAVKNVDGTIKAIREF 357
               + + +         
Sbjct: 386 AAEVLVDGEQPHLVRERE 403


>gi|222109911|ref|YP_002552175.1| diaminopimelate decarboxylase [Acidovorax ebreus TPSY]
 gi|221729355|gb|ACM32175.1| diaminopimelate decarboxylase [Acidovorax ebreus TPSY]
          Length = 431

 Score =  232 bits (591), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 56/389 (14%), Positives = 114/389 (29%), Gaps = 28/389 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +L+ L           V++  A+K  ++  +     ++  G    S  E
Sbjct: 34  GTPLYVYSQAAMLDALGAYQRGFAGRKVQICYAMKANSSLAVLQLFARHGCGFDIVSAGE 93

Query: 63  VML--GHEKFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +           +     V   +     A+          + ++L    + AQ +     
Sbjct: 94  LQRVIAAGGDPAKVIFSGVGKTRAEMRQALEVGIGCFNVESEAELEVLSEVAQSMGLRAP 153

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENK 170
           I +R+NP+V              ++ G   +                V G+  H   +  
Sbjct: 154 ISIRVNPNVDAKTHPYISTGLKGNKFGIAHERTVATYQRAAALPGLRVVGIDCHIGSQIT 213

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               +   +  +    +        +  I  GGG+                 +   K   
Sbjct: 214 EESPYLDAMDRMLDLVQAIEAAGIAVHHIDFGGGLGIDYNGDTPPRADALWAKLLAKLDA 273

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280
                 Q+ +EPG ++V N     T VL +    +    + D+++       +     A 
Sbjct: 274 RGYGDRQLMIEPGRSLVGNAGVCLTEVLYLKPGEQKNFCIVDAAMNDLPRPAMYQAYHAI 333

Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +           +   V G  C +GD  G       V  GD ++      Y  +  + +N
Sbjct: 334 VPLQATAPTAVSHVYDVVGPICESGDWIGRDRNLA-VAAGDMLAVLSAGAYCSSMGSTYN 392

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
               P   + +           S ND + 
Sbjct: 393 TRPRPAEVLVDGARAHLIRTRESVNDIFR 421


>gi|323500161|ref|ZP_08105106.1| diaminopimelate decarboxylase [Vibrio sinaloensis DSM 21326]
 gi|323314790|gb|EGA67856.1| diaminopimelate decarboxylase [Vibrio sinaloensis DSM 21326]
          Length = 417

 Score =  232 bits (591), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 55/378 (14%), Positives = 109/378 (28%), Gaps = 24/378 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  + +            +  A+K  +  G+ + L +   G    S  E
Sbjct: 27  GTPLYVYSRATLERHWNAFDKSVGEHPHLVCYAVKANSNLGVLNALARLGSGFDIVSGGE 86

Query: 63  V-MLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +  +       +   ++   K       A+          +  +L +    A +L     
Sbjct: 87  LERVIAAGGDAKKVVFSGVGKTEQEMQRALELGIKCFNVESEPELERLNKVAGQLGVKAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           I LRINP V  +           ++ G                   ++ G+  H   +  
Sbjct: 147 ISLRINPDVDANTHPYISTGLRDNKFGIAFDRAPAVYQFASSLENLDIKGIDCHIGSQLT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F         +  +      QIE + +GGG+           P       L   + 
Sbjct: 207 DIEPFIDATDRLLALIDDLKAQGIQIEHLDVGGGLGVVYRDELPPQPSDYAKALLGRLAN 266

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279
              +++  EPG AI  N   L T V  +         I+D+++   +   L         
Sbjct: 267 HQDLELIFEPGRAIAANAGVLLTKVEFLKHTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       + G  C  GD  G+      ++  D ++      Y     + +N    
Sbjct: 327 VSPRQGDAKVYDLVGPICETGDFLGKDRELV-IEENDLLAVRSAGAYGFVMSSNYNTRTR 385

Query: 340 PTIAVKNVDGTIKAIREF 357
               + + +      +  
Sbjct: 386 VAEVMVDGEKAHLVRQRE 403


>gi|86359380|ref|YP_471272.1| diaminopimelate decarboxylase protein [Rhizobium etli CFN 42]
 gi|86283482|gb|ABC92545.1| diaminopimelate decarboxylase protein [Rhizobium etli CFN 42]
          Length = 422

 Score =  232 bits (591), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 63/389 (16%), Positives = 110/389 (28%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+     L  +         +    +  A+K  +   +  TL +   G    S  
Sbjct: 25  VGTPFYVYSTATLERHYRVFSEAFADVDSMVCYAMKANSNQAVLKTLGRLGAGIDVVSEG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E+              ++   K  +    A+ +        +  +L     +A       
Sbjct: 85  ELRRALAAGIPANRIMFSGVGKTPQEMDFALEAGIYCFNVESEPELEILNQRAVNAGKTA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
            +  RINP V           +  ++ G                    V G+  H   + 
Sbjct: 145 PVSFRINPDVDAKTHAKISTGKKENKFGISWDRARAIYAHAAKLPGIEVTGIDMHIGSQI 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221
                F    K +             I  + +GGG+    KD          +   +K  
Sbjct: 205 TELQPFDDAFKLLSDLVATLRADGHSIHHVDIGGGLGVPYKDDNNPPPLPDAYAAIVKNQ 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
               + +I  EPG  IV N   L T VL + +   K  VIVD ++   +   L       
Sbjct: 265 LRGLNCKIITEPGRLIVGNAGILVTEVLYVKDGGEKTFVIVDGAMNDLIRPTLYEAYHEI 324

Query: 281 I-----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                   N     A V G  C  GD           K GD ++      Y   +   +N
Sbjct: 325 RPVTISAANAPRIRADVVGPVCETGDYLALDREMAMPKPGDLMAVSTAGAYGAVQAGTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    +             +Y +  +
Sbjct: 385 SRLLVPEVLVKGSDFHVIRPRRTYAELIS 413


>gi|254226601|ref|ZP_04920182.1| diaminopimelate decarboxylase [Vibrio cholerae V51]
 gi|125620873|gb|EAZ49226.1| diaminopimelate decarboxylase [Vibrio cholerae V51]
          Length = 417

 Score =  232 bits (591), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 57/378 (15%), Positives = 109/378 (28%), Gaps = 24/378 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +  G+ +TL +   G    S+ E
Sbjct: 27  GTPLYVYSRATLERHWHAFDKSVGEYPHLICYAVKANSNLGVLNTLARLGSGFDIVSVGE 86

Query: 63  VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++   K       A+          +  +L +    A +L     
Sbjct: 87  LERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKIKCFNVESEPELQRLNKVAGELGVKAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LRINP V              ++ G       +           +V+G+  H   +  
Sbjct: 147 ISLRINPDVDAQTHPYISTGLRDNKFGITFDRAAQVYRLAHSLPNLDVHGIDCHIGSQLT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
           +   F         +          I  + +GGG+    +D       +  K   ++   
Sbjct: 207 ALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGGLGVVYRDELPPQPSEYAKALLDRLER 266

Query: 228 QI----YLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQE---SA 279
                   EPG AI  N   L T V  +         I+D+++   +   L         
Sbjct: 267 HRDLELIFEPGRAIAANAGVLLTKVEFLKHTEHKNFAIIDAAMNDLIRPALYQAWQDIIP 326

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                    T  + G  C   D  G+      ++ GD ++      Y     + +N    
Sbjct: 327 LRPRQGEAQTYDLVGPVCETSDFLGKDRDLV-LQEGDLLAVRSSGAYGFTMSSNYNTRPR 385

Query: 340 PTIAVKNVDGTIKAIREF 357
               + + + T    +  
Sbjct: 386 VAEVMVDGNKTYLVRQRE 403


>gi|317401523|gb|EFV82153.1| diaminopimelate decarboxylase [Achromobacter xylosoxidans C54]
          Length = 430

 Score =  232 bits (591), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 56/388 (14%), Positives = 117/388 (30%), Gaps = 26/388 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+  +  L    DT         V +   +K  +   +     +   G    S  
Sbjct: 38  LGTPLYVYSRAALRAAWDTYRSAVGQRPVLVCYGMKANSNLAILKEFARLGAGFDIVSGG 97

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+              ++   K       A+ +        + ++L +  D AQ+  ++ 
Sbjct: 98  ELKRALAAGADPAKIVFSGVGKQVWEMRAALAAGVMCFNVESEAELQRLSDVAQEAGQRA 157

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
              LR+NP V              ++ G      +++           + GL  H   + 
Sbjct: 158 RVSLRVNPDVDAQTHPYISTGLKENKFGIPIGAALDAYRSARLLPGLEITGLDCHIGSQL 217

Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY- 225
                +   L+ +            ++  + LGGG+     D         L    ++  
Sbjct: 218 TDISPYFDALEKLLDLVADLEGIGIRLSHLDLGGGLGIRYNDEMPPSPKALLDHVFQRLQ 277

Query: 226 -----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES- 278
                 +++ LEPG ++V N   L TTV  +     +N  +VD+++   +   L      
Sbjct: 278 ARGQDHLRLVLEPGRSLVGNAGVLLTTVQYLKHGEARNFAVVDAAMNDLLRPALYDAWHG 337

Query: 279 --ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                          V G  C + D          ++  D ++ E    Y +     +N 
Sbjct: 338 LQPLRPRAGDTIDYDVVGPVCESADWLARQRALV-LEQDDVLALESAGAYGMTMAGNYNT 396

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364
                  + +        +  + +D   
Sbjct: 397 RPRAAEVMVDGGHYHVVRQRETLDDLLR 424


>gi|189219090|ref|YP_001939731.1| diaminopimelate decarboxylase [Methylacidiphilum infernorum V4]
 gi|189185948|gb|ACD83133.1| Diaminopimelate decarboxylase [Methylacidiphilum infernorum V4]
          Length = 428

 Score =  232 bits (591), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 57/397 (14%), Positives = 121/397 (30%), Gaps = 35/397 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+   Q ++++        ++    +  A+K  +   +   L     G    S  E
Sbjct: 26  GTPLYVYSAQTIIDHYKRFDRSLRDIDHFICYAVKANSNQRILKLLVDLGSGFDLVSGGE 85

Query: 63  V-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKA--QKLHKK 117
           +  +       +   +    K                I  +  +L +    A  +     
Sbjct: 86  LYRVLRAGADPQKCTFAGVGKTQSEIEEALQAGIYSFIVESEEELLEIDKIAAKRSTKAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170
           +  R+NP VS             ++ G                E  +  G+  H   + +
Sbjct: 146 VAFRLNPDVSALTHAKITTGTDLNKFGISLDLIDDVFEKCSRLENIHCRGVQMHIGSQIQ 205

Query: 171 SFLCFSAMLKNIEKEFGHFITQI--EWISLGGGIHFTDKD----------------YPVK 212
           S   F   ++ +         +   E+  +GGGI    +                   + 
Sbjct: 206 SIDPFLEAIQKVIPWVEKAKKKYGAEFFDIGGGIGIVYEKAMESGTEAWWQERNELLTLN 265

Query: 213 DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPD 271
            + +++    +   ++I +EPG  +V N   L + V+ + +   K  VI+D+++   V  
Sbjct: 266 RYAEQIVPLVKPLGMKILVEPGRVLVGNAGILVSRVIYVKKGIAKKFVIIDAAMNDLVRP 325

Query: 272 YLLYQESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
                    +      +       V G  C + D F        V+ GD ++      Y 
Sbjct: 326 AFYEAYHQIVPLKETAHGPLEVVDVVGPVCESSDCFAIDRLLPEVRAGDYLALLSAGAYG 385

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            +  + +N    P   +   +      +  SY D   
Sbjct: 386 FSMASNYNSRLKPAEVLVWGNQVQLVRKRESYQDLVA 422


>gi|498170|dbj|BAA06561.1| carboxynorspermidine decarboxylase [Vibrio alginolyticus]
          Length = 377

 Score =  232 bits (591), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 166/368 (45%), Positives = 239/368 (64%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPY+ I++ KL+ NL+ A  ++  +GVKL+LALKCF+ WG+FD +  Y+DGTTSS  +
Sbjct: 6   LKTPYFSINEDKLIENLEKAKQLKDISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG+E FGGETHAY+V Y + ++  V   CD +IFN+ SQL  ++   +     IGLR
Sbjct: 66  EVKLGYETFGGETHAYSVGYSEDDVRDVADICDKMIFNSQSQLAAYRHIVEGKA-SIGLR 124

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP VSY+   LA+P R FSRLG +           ++G+MFH NCENK    F  +L  
Sbjct: 125 LNPGVSYAGQDLANPARQFSRLGVQADHIKPEIFDGIDGVMFHMNCENKDVDAFIGLLDA 184

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I  +FG ++ +++W+S+GGG+ FT   Y ++     LK F+EK+ VQ+YLEPGE I+T T
Sbjct: 185 ISAQFGEYLDKLDWVSMGGGVFFTWPGYDIEKLGLALKAFAEKHGVQMYLEPGERIITKT 244

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299
           T L  TV+DI EN+K   IVDS+ EAH  D L+Y E A+I      G +  ++   SCLA
Sbjct: 245 TDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPASILEASENGEHEYVIGSCSCLA 304

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F   +FE+P++IG R+   D AGY + + NWFNG+ MP++  +  +G I+ + EF Y
Sbjct: 305 GDQFCVANFEQPLEIGQRLHILDSAGYTMVKLNWFNGLRMPSVYCERSNGDIQKLNEFDY 364

Query: 360 NDYYNNLS 367
           +D+  +LS
Sbjct: 365 SDFKRSLS 372


>gi|325282864|ref|YP_004255405.1| diaminopimelate decarboxylase [Deinococcus proteolyticus MRP]
 gi|324314673|gb|ADY25788.1| diaminopimelate decarboxylase [Deinococcus proteolyticus MRP]
          Length = 454

 Score =  231 bits (590), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 62/399 (15%), Positives = 122/399 (30%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP ++ D+  +           +  G   ++  A K F    +   + +   G    S 
Sbjct: 52  GTPLFVYDEALIREQCRRFHRALQKTGLDHQVSYASKAFLCRALARLMAEEGLGLDVVSG 111

Query: 61  YEVMLGHEKF--GGETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+             H +     D E   A+ +     + +++ ++ +    A +L   
Sbjct: 112 GELYTALAAGFDPAHIHLHGNNKLDSELRRALAAGVGCYVVDSLDEVARLNTLAGELGTR 171

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
            +  LR+ P V              S+ G         E  +  +++E  +V G+ FH  
Sbjct: 172 ARCLLRVTPGVEAHTHDFIQTGAADSKFGLNLASGQASEALRAMLQAEWLDVLGVHFHIG 231

Query: 167 CENKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            +        A L  +         H       +++GGG              + L    
Sbjct: 232 SQIFGTEGTRAALARVLAWLAGEREHSGFAARVLNIGGGFGIRYTGADQPQPLEDLLAEV 291

Query: 223 EKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
                           Q++LEPG +IV        TV  + +       V     +  H+
Sbjct: 292 AAALRAGAAEHRLPLPQLWLEPGRSIVGEAGWTLYTVGTVKQIPGVRNYVSVDGGMSDHL 351

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +     A         T  V G+ C +GD+          + GD ++      
Sbjct: 352 RTALYGADYEVALANRMHGAPQGTYTVVGKLCESGDVVARDKPLPEPRHGDLLAVSCTGA 411

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y+    + +N +  P +         + +R  +Y+D   
Sbjct: 412 YHYAMSSRYNAMLRPAVVFVKDGEAREVVRRETYDDLLR 450


>gi|219850725|ref|YP_002465157.1| diaminopimelate decarboxylase [Methanosphaerula palustris E1-9c]
 gi|219544984|gb|ACL15434.1| diaminopimelate decarboxylase [Methanosphaerula palustris E1-9c]
          Length = 429

 Score =  231 bits (590), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 58/395 (14%), Positives = 129/395 (32%), Gaps = 31/395 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+  + ++   +           + + +L A K      +F  L     G    S 
Sbjct: 29  GTPLYVTSEDRIRTQMQGYRDALSSYYSDISVLYAAKANGNLAVFQILASEGAGADVFSS 88

Query: 61  YEVMLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116
            EV L            +N  +    ++   +     +  +++ +L++    A +  K  
Sbjct: 89  GEVALALKAGMDPHKLLFNGSSKTLMDLALAVELGIRVSVDSLDELHQLDAVAAEAGKVA 148

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV-------NGLMFHNNCEN 169
           +I  R+NP++              S+ G   +    +  + +        G+  H   + 
Sbjct: 149 EIAFRVNPALEVPTHPKIATGLASSKFGIPHQQIPAAYAEALACSNIKPVGIHCHIGSQI 208

Query: 170 KSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEF 221
                F+   + + +          ++E++ LGGG+               ++   +   
Sbjct: 209 LDVTPFAKAAEVMVRIAREITDLGIKLEFLDLGGGLGIPYNHTSETAPSPAEYAAAVMPV 268

Query: 222 SE------KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY 275
                       ++++EPG ++V ++T L  TV  + +  K  V VD+     +   +  
Sbjct: 269 FLAGIKECNIHPELWVEPGRSLVADSTVLLATVNSVKKAHKTFVNVDAGFNLLIRPVMYD 328

Query: 276 QESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                +  N        T  V G  C  GD+         V+ GD ++  D   Y  +  
Sbjct: 329 SYHEIVVANRADQPIAGTYTVAGPICETGDLLAVDRALPGVQEGDLVAVLDTGAYGFSMS 388

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366
           + +N        +          R  + +D   ++
Sbjct: 389 SQYNSRPRCAEVLIRGGDAALMRRAETVDDLLASM 423


>gi|303237287|ref|ZP_07323857.1| carboxynorspermidine decarboxylase [Prevotella disiens FB035-09AN]
 gi|302482674|gb|EFL45699.1| carboxynorspermidine decarboxylase [Prevotella disiens FB035-09AN]
          Length = 387

 Score =  231 bits (590), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 127/374 (33%), Positives = 203/374 (54%), Gaps = 13/374 (3%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y++++ KL NNL     + K A ++++LA K +A W  F    +Y+  TT+SSLYE  
Sbjct: 14  PTYILEEAKLRNNLSLISKVAKEADIEIILAFKAYALWRTFPIFREYIKATTASSLYEAK 73

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IGLRI 122
           LG ++FG  TH ++ AY D EID +      ++FN++SQ N+F    ++++K+  IGLR+
Sbjct: 74  LGFQEFGAPTHTFSPAYTDYEIDEIARCSSHLVFNSLSQYNRFHAHIKQINKETSIGLRV 133

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           NP  S  + +L +P  P +R G       ++   ++ G   H +CEN S   F   L +I
Sbjct: 134 NPEYSEVETLLYNPCAPGTRFGVSADKLPKTLPNDIEGFHVHCHCENGS-DVFERTLAHI 192

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNT 241
           E++F  + +QI+WI+ GGG   T KDY +    + LK F EKY   ++ LEPG A    T
Sbjct: 193 EQKFSPWFSQIKWINFGGGHLMTRKDYDIPRLIKLLKTFKEKYPWLKVILEPGSAFAWQT 252

Query: 242 TTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP--------NTGPYTAMV 292
            +L   ++DI E+      + + S   H+PD L      T+               T  +
Sbjct: 253 GSLVAQIVDIVEDKGIQTAILNVSFTCHMPDCLEMPYQPTVRNAACVEEIEQHATNTYRL 312

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352
            G SCL+GD  G +HF+  ++IG+ I FED+  Y   + N FNGI  P IA+ + +  ++
Sbjct: 313 GGNSCLSGDWLGYWHFDHALEIGENIIFEDMLHYTTVKTNMFNGITHPGIALLHPNNELE 372

Query: 353 AIREFSYNDYYNNL 366
            +R+++Y DY   +
Sbjct: 373 ILRQYAYEDYKQRM 386


>gi|171910002|ref|ZP_02925472.1| CARBOXYNORSPERMIDINE DECARBOXYLASE [Verrucomicrobium spinosum DSM
           4136]
          Length = 383

 Score =  231 bits (590), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 161/377 (42%), Positives = 239/377 (63%), Gaps = 14/377 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TPYYLID+ ++L  ++    +++ +G K +LALKCF++W  FD + QY+ GTTSSSL+
Sbjct: 3   LSTPYYLIDEARMLPAMERIRLVQERSGAKCVLALKCFSSWCAFDFMRQYLVGTTSSSLW 62

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LGHEKFGGETH Y+VAY D EI  V   CD IIFN++ QLN+    A      +GLR
Sbjct: 63  ETRLGHEKFGGETHGYSVAYADDEIAEVAGYCDKIIFNSLGQLNRLGHHA--AGISMGLR 120

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP + +S   L++P   +SRLG + ++  E     + G M H NC+N     F + L  
Sbjct: 121 LNPGIGHSCSELSNPVCQYSRLGVRAEELPEDIGSRIQGAMIHVNCDNDDLASFCSQLDV 180

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           IE+ FG  +  ++W+S GGGI FTD+ YP+ DFC+RL+EFS+++S++IYLEPGEA VT++
Sbjct: 181 IEERFGKLLPHLQWLSFGGGIAFTDEAYPIDDFCRRLREFSQRHSLEIYLEPGEAAVTHS 240

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT------------GPYT 289
           T+L   VLD+ EN    ++VD+ VE H+ D L Y  +  +                  + 
Sbjct: 241 TSLVVKVLDVVENEVPTLVVDAGVETHLLDVLTYGYTPEVDGAEPLARDAKDLGGRAGHV 300

Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349
             +CGR+CLAGD FG + F +PV +GD + F +V GY++ +KN+FNGI MP I  +N+ G
Sbjct: 301 YRICGRTCLAGDHFGNYVFPRPVALGDELRFPNVGGYSMVKKNYFNGIRMPAIYHRNLSG 360

Query: 350 TIKAIREFSYNDYYNNL 366
            ++ +++ +Y D+   L
Sbjct: 361 ELRLVQQPTYEDFREAL 377


>gi|186477550|ref|YP_001859020.1| diaminopimelate decarboxylase [Burkholderia phymatum STM815]
 gi|184194009|gb|ACC71974.1| diaminopimelate decarboxylase [Burkholderia phymatum STM815]
          Length = 420

 Score =  231 bits (590), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 58/387 (14%), Positives = 121/387 (31%), Gaps = 26/387 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L                 + +A+K  +   + +   +   G    S  E
Sbjct: 28  GTPLYVYSRDALTKAWHAYADACAGRRATVHVAVKANSNLAVLNLFARMGAGFDIVSGGE 87

Query: 63  VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +          E   ++   K      DA+ +        ++ +L++    A        
Sbjct: 88  LARVLAAGGKAENTVFSGVGKSVAEMRDALAAGVKCFNVESIPELDRLNAVAGEMGKKAP 147

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D           +  +V G+  H   +  
Sbjct: 148 VSLRVNPDVDAKTHPYISTGLKSNKFGVAFDDARATYRAAAAMKHLDVVGIDCHIGSQIT 207

Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               +   +  + +   +       I+ + +GGG+  T  D    D    ++   ++   
Sbjct: 208 EVAPYLDAVDKLLELVAQIEADGVTIKHVDVGGGLGITYDDETPPDIGDFVRTLLDRIEA 267

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278
                 ++Y EPG ++V N   L T V  +     KN  IVD+++       +       
Sbjct: 268 RGHGHREVYFEPGRSLVGNAGMLLTRVEFLKTGAEKNFAIVDAAMNDLARPAMYEAYHAI 327

Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
              +  +   +   + G  C +GD  G       V+ GD ++      Y     + +N  
Sbjct: 328 EPVVQRDGARHVYDIVGPVCESGDWLGRERRLA-VEPGDLLAIRSAGAYGFAMSSNYNTR 386

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
                 + + D      +     D + 
Sbjct: 387 ARAAEVMVDGDKAYVVRKREEVKDLFA 413


>gi|83595885|gb|ABC25247.1| diaminopimelate decarboxylase [uncultured marine bacterium Ant4D3]
          Length = 421

 Score =  231 bits (590), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 57/378 (15%), Positives = 114/378 (30%), Gaps = 24/378 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  N        +     +  A+K  +   + + L Q   G    S+ E
Sbjct: 30  GTPTYVYSRDTLERNYVAYSQALEGCEHLVCYAVKANSNIAVLNVLAQLGAGFDIVSVGE 89

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +          +   ++           A+          + ++L + ++ A  ++    
Sbjct: 90  LERVLVAGADPKRIVFSGVGKQTHEMQRALEVGVHCFNVESEAELERLQNVAAGMNCIAP 149

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170
           + LRINP V              ++ G                    V G+  H   +  
Sbjct: 150 VSLRINPDVDAKTHPYISTGLKENKFGIGIDQAPAAYAQAAAMAHIKVIGVDCHIGSQLT 209

Query: 171 SFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKDFC---QRLKEFSEK 224
           S   +   +  +             IE + LGGG+     D           R++     
Sbjct: 210 SIDPYLDAMDRLFGLIDTIAAQGIAIEHLDLGGGLGVCYGDEEPPAIADFMARVRAHLGD 269

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATI-- 281
             + +  EPG +I  +   L T V  I  N      IVD+++   +   L       I  
Sbjct: 270 RKLALVFEPGRSICADAGVLLTRVEYIKNNQDKYFAIVDAAMNDLIRPALYSAWQDIIPV 329

Query: 282 --YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
             + N+  +   + G  C   D  G+      ++  D ++      Y     + +N  N 
Sbjct: 330 NLHSNSQAHNFDIVGPICETSDFLGKDRNLA-IEANDLLAVCSSGAYGFAMASNYNSRNR 388

Query: 340 PTIAVKNVDGTIKAIREF 357
               + + + +       
Sbjct: 389 AAEVMVDGNKSHLIGERE 406


>gi|197336405|ref|YP_002157271.1| diaminopimelate decarboxylase [Vibrio fischeri MJ11]
 gi|197317895|gb|ACH67342.1| diaminopimelate decarboxylase [Vibrio fischeri MJ11]
          Length = 417

 Score =  231 bits (590), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 57/378 (15%), Positives = 108/378 (28%), Gaps = 24/378 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         N    +  A+K  +  G+ + L +   G    S  E
Sbjct: 27  GTPLYVYSRATLERHWKAFDNSVGNHPHLVCYAVKANSNIGVLNALARLGSGFDIVSQGE 86

Query: 63  V-MLGHEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +  +           ++   K  D    A+          +  +L +    A    +   
Sbjct: 87  LERVVAAGGDPTKVVFSGVGKTADEMRRALELKIKCFNVESEPELERLNAVAAEMGVIAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           I LRINP V              ++ G       E           +V G+  H   +  
Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAPEVYKFAQSLPNLDVQGIDCHIGSQLT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F         +  +       I  + +GGG+           P +     L   +E
Sbjct: 207 DIEPFIDATDRLLALIDDLKAQGVNIRHLDVGGGLGVVYRDELPPQPSEYATALLGRLAE 266

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279
              +++  EPG AI  N   L T V  +         I+D+++   +   L         
Sbjct: 267 HQDLELIFEPGRAIAANAGILVTKVEFLKHTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            +          + G  C  GD  G+      ++  D ++      Y     + +N    
Sbjct: 327 VVPHEGDAQNYDLVGPICETGDFLGKDRALV-LEANDLLAVRSSGAYGFVMSSNYNTRCR 385

Query: 340 PTIAVKNVDGTIKAIREF 357
               + +        +  
Sbjct: 386 AAEIMVDGGDAHLVRKRE 403


>gi|323495294|ref|ZP_08100375.1| diaminopimelate decarboxylase [Vibrio brasiliensis LMG 20546]
 gi|323310471|gb|EGA63654.1| diaminopimelate decarboxylase [Vibrio brasiliensis LMG 20546]
          Length = 417

 Score =  231 bits (590), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 57/378 (15%), Positives = 109/378 (28%), Gaps = 24/378 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +  G+ + L +   G    S  E
Sbjct: 27  GTPLYVYSRATLERHWHAFDKSVGEHPHLVCYAVKANSNLGVLNALARLGSGFDIVSGGE 86

Query: 63  V-MLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +  +           ++   K       A+          +  +L +    A +L     
Sbjct: 87  LERVIAAGGEPSKVVFSGVGKTEAEMKRALELGIKCFNVESEPELERLNKVAGELGKKAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LRINP V  +           ++ G   +               +V G+  H   +  
Sbjct: 147 ISLRINPDVDANTHPYISTGLRDNKFGIAFERAPAVYKFAQSLEHLDVRGIDCHIGSQLT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F         +  +       IE + +GGG+           P       L     
Sbjct: 207 DIEPFIDATDRLLALIDDLKSQGVTIEHLDVGGGLGVVYRDELPPEPSDYAKALLGRLEN 266

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279
              +++  EPG AI  N   L T V  +         I+D+++   +   L         
Sbjct: 267 HQDLELIFEPGRAIAANAGVLLTKVEFLKPTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                  P T  + G  C  GD  G+      ++  D ++      Y     + +N  + 
Sbjct: 327 VCPREGEPVTYDLVGPICETGDFLGKDRALV-IEENDLLAVRSAGAYGFVMSSNYNTRSR 385

Query: 340 PTIAVKNVDGTIKAIREF 357
               + + +      +  
Sbjct: 386 AAEVMVDGNQAHLVRQRE 403


>gi|39937799|ref|NP_950075.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris CGA009]
 gi|39651659|emb|CAE30181.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris CGA009]
          Length = 421

 Score =  231 bits (590), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 59/390 (15%), Positives = 110/390 (28%), Gaps = 28/390 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +              +  A+K  +   +  TL +   G    S  
Sbjct: 25  VGTPFYCYSSATLERHYRVFTEAFAGLDALVCYAMKANSNQSVLRTLAKLGAGADVVSGG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118
           E+              ++   K         + D   +   +  +L +    A +  +  
Sbjct: 85  ELQRALAAGIPPSKIVFSGVGKTEAELRAALDHDIKCLNVESEPELEQLSRIAVETGRTA 144

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
              LR+NP V           +  ++ G   +   E   +        V G+  H   + 
Sbjct: 145 RISLRVNPDVDSGTHAKISTGKSENKFGIPIRHAREVYARAAKLPGIQVTGVDVHIGSQI 204

Query: 170 KSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEF 221
                       +             +  +  GGG+     +          + + +K  
Sbjct: 205 IDLAPMEAAFRKVAEFIHVLRGDGHTVNHVDFGGGLGIPYYEDRDAPPEPFAYAEMVKRV 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
           +      +  EPG  IV N   L   V+ +   + K  VI+D+++   +    LY+    
Sbjct: 265 THNLGCTLLFEPGRMIVGNAGILVAKVIYVKHGDGKTFVIIDAAMNDLIRPT-LYEAYHE 323

Query: 281 IYPNTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
           I P   P        A V G  C  GD          +K GD I+      Y   +   +
Sbjct: 324 ILPVAAPAPGVATMVADVVGPVCETGDYLALDRKLPELKAGDLIAIMTAGAYGAVQACTY 383

Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           N   +    +   D                
Sbjct: 384 NTRALVPEVLVKDDQVAVVRPRIEVEQLIA 413


>gi|270307899|ref|YP_003329957.1| diaminopimelate decarboxylase [Dehalococcoides sp. VS]
 gi|270153791|gb|ACZ61629.1| diaminopimelate decarboxylase [Dehalococcoides sp. VS]
          Length = 434

 Score =  231 bits (590), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 59/399 (14%), Positives = 120/399 (30%), Gaps = 36/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D+  +  N            A   +  A K F    +   L +        S 
Sbjct: 34  GTPLYIFDESTIRQNCRDFKREFSRRYADSSVSYASKAFLHPALLKILAEEGMSLDVVSG 93

Query: 61  YEVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115
            E+ + +   F  +   ++   K  +    A+  +   I+ ++  ++      A +    
Sbjct: 94  GELSIANNAGFPMDMVYFHGNNKSAEELRLALRLHVGRIVVDSFDEIKLLSKLADESGHI 153

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCE 168
             I LR+ P V           +  S+ G       E+          N+ G  FH   +
Sbjct: 154 PDILLRLTPGVDAHTHHHITTGKLDSKFGFPLFQAAEAVGLAMAQASLNLVGFHFHIGSQ 213

Query: 169 NK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRL-- 218
                        +L    +    +   IE + +GGG     +       V  + + +  
Sbjct: 214 IFETQPFLDAIDLVLDFAAQVQERYGFDIEELDIGGGYGVQYEIDKPAPAVSVYAEAIGA 273

Query: 219 -----KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271
                    +     + +EPG AI+        TV  I +             +  ++  
Sbjct: 274 KIVAKCHSLKLAPPSLNIEPGRAIIAQAGVALYTVGVIKDIPGIRQYASVDGGMGDNIRP 333

Query: 272 YLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
            L   +   +      +       + G+ C +GDI         ++ GD ++      Y 
Sbjct: 334 ALYEAKYEAVVASNVQSAEKQKVTIAGKFCESGDILITDIELPSLRAGDILAVPCCGAYC 393

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366
           +   + +NG   P + +          R  +  D  + L
Sbjct: 394 LPMSSNYNGYQRPAVVILKNGEDRLIRRRETVEDL-SRL 431


>gi|313676255|ref|YP_004054251.1| diaminopimelate decarboxylase [Marivirga tractuosa DSM 4126]
 gi|312942953|gb|ADR22143.1| diaminopimelate decarboxylase [Marivirga tractuosa DSM 4126]
          Length = 402

 Score =  231 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 70/385 (18%), Positives = 123/385 (31%), Gaps = 25/385 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D  K+ + +           +KL  A K  +   +   + ++  G    S+ E
Sbjct: 14  GTPLYVYDADKIASQIKRLNDAFSGINLKLKYATKALSNVSVLKWMKKHGTGLDVVSIQE 73

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
             LG    F  +   Y       +     +     I  + +S L +F  +       + +
Sbjct: 74  AYLGLKAGFEPKDILYTPNCVSIDEIIEAVDLGLMINIDNISILEQFGHRYHD-TVPVCI 132

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKSFLC 174
           R+NP +              S+ G            IE+   NV GL  H   +      
Sbjct: 133 RLNPHIMAGGNSKISTGHIDSKFGISILQMRHLLRVIENYNINVVGLHIHTGSDILDSEV 192

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI----- 229
           F    + I  E       I++I  G G     K+  V    + L +   K          
Sbjct: 193 FLRGTE-IIFEAAEDFPNIDFIDFGSGFKVAYKEGDVTTDIEELGKEVSKRFKAFCKSRG 251

Query: 230 -----YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
                + EPG+ +V+      + V  I      + +   +   H+   ++Y     I   
Sbjct: 252 KDLELWFEPGKFLVSEAGYFLSKVNVIKTTPATVFVGLDTGMNHLLRPMMYDAYHHIENI 311

Query: 285 TGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
           + P        V G  C   D FG       VK GD I+ ++   Y  +  + +N    P
Sbjct: 312 SNPSDTQRVYTVVGYICET-DTFGTDRRLSEVKQGDIIAIKNAGAYGFSMASNYNSRYRP 370

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + +        +  S +D   N
Sbjct: 371 AEVLVHEGKDQLVRKRESLDDLLRN 395


>gi|91975418|ref|YP_568077.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris BisB5]
 gi|91681874|gb|ABE38176.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris BisB5]
          Length = 421

 Score =  231 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 53/389 (13%), Positives = 106/389 (27%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +              +  A+K  +   +  TL +   G    S  
Sbjct: 25  VGTPFYCYSTATLERHYRVFTEALSGVDALVCYAMKANSNQSVLRTLAKLGAGADVVSGG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118
           E+              ++   K           D   +   +  +L      A +  +  
Sbjct: 85  ELKRALAAGIPPGKIVFSGVGKTEAELRAALAHDIKCLNVESEPELELLSRLAVETGRIA 144

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
              +R+NP V           +  ++ G   +   +   +        V G+  H   + 
Sbjct: 145 RISIRVNPDVDSGTHAKISTGKSENKFGIPIRHARDVYARAAKLPGIQVTGVDVHIGSQI 204

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEF 221
                  +  + +             I  +  GGG+     +          + + +K  
Sbjct: 205 IDLAPMESAFRLVAEFVHVLRGDGHTISHVDFGGGLGIPYYEDRAAPPEPFSYAEMVKRI 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
           +      +  EPG  IV N   L   V+ +   + K  V++D+++   +   L       
Sbjct: 265 THNLGCTLMFEPGRTIVGNAGILVAQVIYVKHGDGKTFVVIDAAMNDLIRPTLYEAYHEI 324

Query: 281 IYPNT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +            T  V G  C  GD          +K GD I+      Y   +   +N
Sbjct: 325 LPVAEPAPGVKMITGDVVGPVCETGDYLALDRQLPELKSGDLIAIMTAGAYGAVQACTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    +   D                
Sbjct: 385 TRALVPEVLVKDDQYAVVRPRIEVEQLIA 413


>gi|147919802|ref|YP_686452.1| diaminopimelate decarboxylase [uncultured methanogenic archaeon
           RC-I]
 gi|110621848|emb|CAJ37126.1| diaminopimelate decarboxylase [uncultured methanogenic archaeon
           RC-I]
          Length = 427

 Score =  231 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 69/390 (17%), Positives = 127/390 (32%), Gaps = 29/390 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ ++ +L +N           GV +  A K      +     Q   G  + S  E
Sbjct: 32  GTPLYVTNEDRLRDNYRRFSAAF--PGVSIFFAAKSNNNLVVQRIFAQEGAGADAFSDGE 89

Query: 63  VMLGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG- 119
           + L        E   +      D E+   + +   +  ++  +L      A+K  K++  
Sbjct: 90  IYLARMAGIPAEKILFTGNSKTDAELQYAIDSGVMVSVDSRDELLALSKLAKKAKKEVKI 149

Query: 120 -LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKS 171
             R+NP VS             S+ G   KD +    +       N  G+  H   +   
Sbjct: 150 AFRVNPDVSADAHPKLATGLKVSKFGIPTKDIVSIYKEAKKLPGVNPVGIHCHIGSQILE 209

Query: 172 FLCFSAMLKNIEKEFGHF--ITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKY 225
              ++     +            +EW+ LGGG         K    KD+ + +    +  
Sbjct: 210 TAPYTEATNKMMDLVEQISGFIDLEWVDLGGGFGIPYQKGTKVPTPKDWAKAILPTFKAR 269

Query: 226 SVQI------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA 279
             +I      +LEPG  +V ++T L   V  + +  KN V  D+     +   +      
Sbjct: 270 CKKIGISPELHLEPGRYMVADSTVLLMRVNTVKKAYKNFVGTDAGFNTLIRPAMYDSYHE 329

Query: 280 TIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
            +  N           V G  C +GDI         V+  D ++  D   Y     + + 
Sbjct: 330 AVIANKAGSPAKGEYTVVGPICESGDILATDRQLPVVEKDDIVALLDAGAYGFCMSSQYV 389

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           G       + +        +  +++D   N
Sbjct: 390 GRPRCAEVLVHNGKADLIRKRETFDDLLQN 419


>gi|152979892|ref|YP_001355061.1| diaminopimelate decarboxylase [Janthinobacterium sp. Marseille]
 gi|151279969|gb|ABR88379.1| diaminopimelate decarboxylase [Janthinobacterium sp. Marseille]
          Length = 427

 Score =  231 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 61/400 (15%), Positives = 122/400 (30%), Gaps = 36/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG-----VKLLLALKCFAAWGMFDTLNQYMDGTTS 57
            +P Y+  K  L+ N        K  G       +  ++K  +   + + L +   G   
Sbjct: 26  GSPTYIYSKAALVENFSAYADACKQHGRNDETALVCYSVKSNSNLAVLNLLGKLGSGFDI 85

Query: 58  SSLYEVMLGHE--KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--Q 112
            S  E++          +     V   ++    A+  +       ++ +L++    A   
Sbjct: 86  VSGGELLRVLAAGGSPRKVIFSGVGKSREEMQLALSHDILCFNVESIPELHRLNAVAAEM 145

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHN 165
                + LR+NP+V              ++ G   +D              +V G+  H 
Sbjct: 146 GKKASVSLRVNPNVDAKTHPYISTGLKDNKFGIAYEDTLTTYRVAAALPNIDVVGIDCHI 205

Query: 166 NCENKSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKD--------YPVKDF 214
             +          +  +             +  + +GGGI     +        Y  + F
Sbjct: 206 GSQLLDDAPLLEAVDKLIELIDTLDAEGIHLHHLDIGGGIGINYDNDQPVAVGDYLARLF 265

Query: 215 CQRLKEFSEKYSVQIY---LEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVP 270
            +      +K+         EPG +IV N   L T V  I     KN  IVD+++   + 
Sbjct: 266 AKIDAWRKQKHGGAPIKVLFEPGRSIVGNAGILLTEVQYIKHGETKNFAIVDAAMNDLMR 325

Query: 271 DYLLYQES---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
             +                  T  V G  C +GD          ++ GD ++      Y 
Sbjct: 326 PAMYEAWHGVLPVKQSTAAAATYDVVGPVCESGDWLARSRELA-IEEGDLLAIMSAGAYG 384

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367
           +   + +N        + + D      +  + +D +   S
Sbjct: 385 MTMSSNYNTRGRAAEVMVDGDKVHLIRKREAASDLFALES 424


>gi|308174124|ref|YP_003920829.1| diaminopimelate decarboxylase [Bacillus amyloliquefaciens DSM 7]
 gi|307606988|emb|CBI43359.1| diaminopimelate decarboxylase [Bacillus amyloliquefaciens DSM 7]
          Length = 439

 Score =  231 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 64/399 (16%), Positives = 128/399 (32%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   +     +        +   ++  A K F++  M     Q        S 
Sbjct: 30  GTPLYVYDVALIRERAKSFKQAFIDADLKAQVAYASKAFSSVAMIQLAEQEGLSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115
            E+       F  +   ++     ++    A+      I+ +   +++   +  +K    
Sbjct: 90  GELFTAVSAGFPADRIHFHGNNKSREELQMALDHQIGCIVVDNFHEISLLAELCRKSGRA 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
             + LRI P V           +  S+ G            +  ++S+   + G+  H  
Sbjct: 150 MDVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQIEKAIEQVLQSDHIRLLGVHCHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F    + I  +   +        E ++LGGG      +              
Sbjct: 210 SQIFDTAGFVLAAEKIFAKLNEWRESFGFVSEVLNLGGGFGIRYTEEDEPLHPAVYVEKI 269

Query: 215 CQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269
            + +KE +E Y+  I   ++EPG ++V +  T   T+    E         VD  +  ++
Sbjct: 270 IEAVKENAELYAFDIPEIWIEPGRSLVGDAGTTLYTIGSQKEVPGTRKYAAVDGGMSDNI 329

Query: 270 PDYLLYQESATI----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   +           T  + G+ C +GD+         VK GD ++      
Sbjct: 330 RPALYQAKYEAVSANRISEHHDTTVSIAGKCCESGDMLIWDIDLPEVKEGDLLAVFCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  N +N I  P +           I+  +Y D   
Sbjct: 390 YGYSMANNYNRIPRPAVVFVEDGEAHLVIKRETYEDIVK 428


>gi|328552744|gb|AEB23236.1| diaminopimelate decarboxylase [Bacillus amyloliquefaciens TA208]
 gi|328912458|gb|AEB64054.1| diaminopimelate decarboxylase [Bacillus amyloliquefaciens LL3]
          Length = 439

 Score =  231 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 64/399 (16%), Positives = 128/399 (32%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   +     +        +   ++  A K F++  M     Q        S 
Sbjct: 30  GTPLYVYDVALIRERAKSFKQAFIDADLKAQVAYASKAFSSVAMIQLAEQEGLSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115
            E+       F  +   ++     ++    A+      I+ +   +++   +  +K    
Sbjct: 90  GELFTAVSAGFPADRIHFHGNNKSREELQMALDHQIGCIVVDNFHEISLLAELCRKSGRA 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
             + LRI P V           +  S+ G            +  ++S+   + G+  H  
Sbjct: 150 MDVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQIEKAIEQVLQSDHIRLLGVHCHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F    + I  +   +        E ++LGGG      +              
Sbjct: 210 SQIFDTAGFVLAAEKIFAKLNEWRESFGFVSEVLNLGGGFGIRYTEEDEPLHPAVYVEKI 269

Query: 215 CQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269
            + +KE +E Y+  I   ++EPG ++V +  T   T+    E         VD  +  ++
Sbjct: 270 IEAVKENAELYAFDIPEIWIEPGRSLVGDAGTTLYTIGSQKEVPGTRKYAAVDGGMSDNI 329

Query: 270 PDYLLYQESATI----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   +           T  + G+ C +GD+         VK GD ++      
Sbjct: 330 RPALYQAKYEAVSANRISEHHDTTVSIAGKCCESGDMLIWDIDLPEVKEGDLLAVFCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  N +N I  P +           I+  +Y D   
Sbjct: 390 YGYSMANNYNRIPRPAVVFVEDGEAHLVIKRETYEDIVK 428


>gi|297787806|pdb|3N2B|A Chain A, 1.8 Angstrom Resolution Crystal Structure Of
           Diaminopimelate Decarboxylase (Lysa) From Vibrio
           Cholerae.
 gi|297787807|pdb|3N2B|B Chain B, 1.8 Angstrom Resolution Crystal Structure Of
           Diaminopimelate Decarboxylase (Lysa) From Vibrio
           Cholerae.
 gi|297787808|pdb|3N2B|C Chain C, 1.8 Angstrom Resolution Crystal Structure Of
           Diaminopimelate Decarboxylase (Lysa) From Vibrio
           Cholerae.
 gi|297787809|pdb|3N2B|D Chain D, 1.8 Angstrom Resolution Crystal Structure Of
           Diaminopimelate Decarboxylase (Lysa) From Vibrio
           Cholerae
          Length = 441

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 57/378 (15%), Positives = 110/378 (29%), Gaps = 24/378 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  +  G+ +TL +   G    S+ E
Sbjct: 51  GTPLYVYSRATLERHWHAFDKSVGDYPHLICYAVKANSNLGVLNTLARLGSGFDIVSVGE 110

Query: 63  VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++   K       A+          +  +L +    A +L     
Sbjct: 111 LERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKIKCFNVESEPELQRLNKVAGELGVKAP 170

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LRINP V              ++ G       +           +V+G+  H   +  
Sbjct: 171 ISLRINPDVDAKTHPYISTGLRDNKFGITFDRAAQVYRLAHSLPNLDVHGIDCHIGSQLT 230

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
           +   F         +          I  + +GGG+    +D       +  K   ++   
Sbjct: 231 ALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGGLGVVYRDELPPQPSEYAKALLDRLER 290

Query: 228 QI----YLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQE---SA 279
                   EPG AI  N   L T V  +         I+D+++   +   L         
Sbjct: 291 HRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHKNFAIIDAAMNDLIRPALYQAWQDIIP 350

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                    T  + G  C   D  G+      ++ GD ++      Y     + +N    
Sbjct: 351 LRPRQGEAQTYDLVGPVCETSDFLGKDRDLV-LQEGDLLAVRSSGAYGFTMSSNYNTRPR 409

Query: 340 PTIAVKNVDGTIKAIREF 357
               + + + T    +  
Sbjct: 410 VAEVMVDGNKTYLVRQRE 427


>gi|15640156|ref|NP_229783.1| diaminopimelate decarboxylase [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121587729|ref|ZP_01677490.1| diaminopimelate decarboxylase [Vibrio cholerae 2740-80]
 gi|121728316|ref|ZP_01681347.1| diaminopimelate decarboxylase [Vibrio cholerae V52]
 gi|147674363|ref|YP_001218294.1| diaminopimelate decarboxylase [Vibrio cholerae O395]
 gi|153214838|ref|ZP_01949646.1| diaminopimelate decarboxylase [Vibrio cholerae 1587]
 gi|153803072|ref|ZP_01957658.1| diaminopimelate decarboxylase [Vibrio cholerae MZO-3]
 gi|153818954|ref|ZP_01971621.1| diaminopimelate decarboxylase [Vibrio cholerae NCTC 8457]
 gi|153822335|ref|ZP_01975002.1| diaminopimelate decarboxylase [Vibrio cholerae B33]
 gi|153826290|ref|ZP_01978957.1| diaminopimelate decarboxylase [Vibrio cholerae MZO-2]
 gi|153830026|ref|ZP_01982693.1| diaminopimelate decarboxylase [Vibrio cholerae 623-39]
 gi|227080361|ref|YP_002808912.1| diaminopimelate decarboxylase [Vibrio cholerae M66-2]
 gi|229508403|ref|ZP_04397907.1| diaminopimelate decarboxylase [Vibrio cholerae BX 330286]
 gi|229508916|ref|ZP_04398406.1| diaminopimelate decarboxylase [Vibrio cholerae B33]
 gi|229515840|ref|ZP_04405298.1| diaminopimelate decarboxylase [Vibrio cholerae TMA 21]
 gi|229517030|ref|ZP_04406476.1| diaminopimelate decarboxylase [Vibrio cholerae RC9]
 gi|229520083|ref|ZP_04409511.1| diaminopimelate decarboxylase [Vibrio cholerae TM 11079-80]
 gi|229525021|ref|ZP_04414426.1| diaminopimelate decarboxylase [Vibrio cholerae bv. albensis VL426]
 gi|229527133|ref|ZP_04416527.1| diaminopimelate decarboxylase [Vibrio cholerae 12129(1)]
 gi|229606676|ref|YP_002877324.1| diaminopimelate decarboxylase [Vibrio cholerae MJ-1236]
 gi|254291934|ref|ZP_04962715.1| diaminopimelate decarboxylase [Vibrio cholerae AM-19226]
 gi|254851509|ref|ZP_05240859.1| diaminopimelate decarboxylase [Vibrio cholerae MO10]
 gi|255743922|ref|ZP_05417877.1| diaminopimelate decarboxylase [Vibrio cholera CIRS 101]
 gi|262151161|ref|ZP_06028300.1| diaminopimelate decarboxylase [Vibrio cholerae INDRE 91/1]
 gi|262167030|ref|ZP_06034747.1| diaminopimelate decarboxylase [Vibrio cholerae RC27]
 gi|297581834|ref|ZP_06943755.1| diaminopimelate decarboxylase [Vibrio cholerae RC385]
 gi|298501107|ref|ZP_07010907.1| diaminopimelate decarboxylase [Vibrio cholerae MAK 757]
 gi|13124077|sp|Q9KVL7|DCDA_VIBCH RecName: Full=Diaminopimelate decarboxylase; Short=DAP
           decarboxylase
 gi|9654525|gb|AAF93302.1| diaminopimelate decarboxylase [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121548028|gb|EAX58106.1| diaminopimelate decarboxylase [Vibrio cholerae 2740-80]
 gi|121629446|gb|EAX61875.1| diaminopimelate decarboxylase [Vibrio cholerae V52]
 gi|124115081|gb|EAY33901.1| diaminopimelate decarboxylase [Vibrio cholerae 1587]
 gi|124121391|gb|EAY40134.1| diaminopimelate decarboxylase [Vibrio cholerae MZO-3]
 gi|126510516|gb|EAZ73110.1| diaminopimelate decarboxylase [Vibrio cholerae NCTC 8457]
 gi|126520161|gb|EAZ77384.1| diaminopimelate decarboxylase [Vibrio cholerae B33]
 gi|146316246|gb|ABQ20785.1| diaminopimelate decarboxylase [Vibrio cholerae O395]
 gi|148874511|gb|EDL72646.1| diaminopimelate decarboxylase [Vibrio cholerae 623-39]
 gi|149739958|gb|EDM54137.1| diaminopimelate decarboxylase [Vibrio cholerae MZO-2]
 gi|150422144|gb|EDN14110.1| diaminopimelate decarboxylase [Vibrio cholerae AM-19226]
 gi|227008249|gb|ACP04461.1| diaminopimelate decarboxylase [Vibrio cholerae M66-2]
 gi|227011873|gb|ACP08083.1| diaminopimelate decarboxylase [Vibrio cholerae O395]
 gi|229335364|gb|EEO00847.1| diaminopimelate decarboxylase [Vibrio cholerae 12129(1)]
 gi|229338602|gb|EEO03619.1| diaminopimelate decarboxylase [Vibrio cholerae bv. albensis VL426]
 gi|229342871|gb|EEO07861.1| diaminopimelate decarboxylase [Vibrio cholerae TM 11079-80]
 gi|229346093|gb|EEO11065.1| diaminopimelate decarboxylase [Vibrio cholerae RC9]
 gi|229347103|gb|EEO12064.1| diaminopimelate decarboxylase [Vibrio cholerae TMA 21]
 gi|229354033|gb|EEO18966.1| diaminopimelate decarboxylase [Vibrio cholerae B33]
 gi|229354676|gb|EEO19598.1| diaminopimelate decarboxylase [Vibrio cholerae BX 330286]
 gi|229369331|gb|ACQ59754.1| diaminopimelate decarboxylase [Vibrio cholerae MJ-1236]
 gi|254847214|gb|EET25628.1| diaminopimelate decarboxylase [Vibrio cholerae MO10]
 gi|255738405|gb|EET93795.1| diaminopimelate decarboxylase [Vibrio cholera CIRS 101]
 gi|262024548|gb|EEY43232.1| diaminopimelate decarboxylase [Vibrio cholerae RC27]
 gi|262031055|gb|EEY49680.1| diaminopimelate decarboxylase [Vibrio cholerae INDRE 91/1]
 gi|297533928|gb|EFH72768.1| diaminopimelate decarboxylase [Vibrio cholerae RC385]
 gi|297540141|gb|EFH76202.1| diaminopimelate decarboxylase [Vibrio cholerae MAK 757]
          Length = 417

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 57/378 (15%), Positives = 110/378 (29%), Gaps = 24/378 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  +  G+ +TL +   G    S+ E
Sbjct: 27  GTPLYVYSRATLERHWHAFDKSVGDYPHLICYAVKANSNLGVLNTLARLGSGFDIVSVGE 86

Query: 63  VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++   K       A+          +  +L +    A +L     
Sbjct: 87  LERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKIKCFNVESEPELQRLNKVAGELGVKAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LRINP V              ++ G       +           +V+G+  H   +  
Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGITFDRAAQVYRLAHSLPNLDVHGIDCHIGSQLT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
           +   F         +          I  + +GGG+    +D       +  K   ++   
Sbjct: 207 ALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGGLGVVYRDELPPQPSEYAKALLDRLER 266

Query: 228 QI----YLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQE---SA 279
                   EPG AI  N   L T V  +         I+D+++   +   L         
Sbjct: 267 HRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHKNFAIIDAAMNDLIRPALYQAWQDIIP 326

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                    T  + G  C   D  G+      ++ GD ++      Y     + +N    
Sbjct: 327 LRPRQGEAQTYDLVGPVCETSDFLGKDRDLV-LQEGDLLAVRSSGAYGFTMSSNYNTRPR 385

Query: 340 PTIAVKNVDGTIKAIREF 357
               + + + T    +  
Sbjct: 386 VAEVMVDGNKTYLVRQRE 403


>gi|262198680|ref|YP_003269889.1| diaminopimelate decarboxylase [Haliangium ochraceum DSM 14365]
 gi|262082027|gb|ACY17996.1| diaminopimelate decarboxylase [Haliangium ochraceum DSM 14365]
          Length = 425

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 56/393 (14%), Positives = 102/393 (25%), Gaps = 30/393 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+     L  +L             +  ++K      +   L Q   G    S  
Sbjct: 25  VGTPVYVYSHATLTRHLQVFDAALSGVPHLVCFSVKSNPNLAVLRLLFQLGAGADIVSGG 84

Query: 62  EVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKA--QKLHK 116
           E+              ++   K     A             +  +L+     A       
Sbjct: 85  ELARVLRAGGDPAKVVFSGVGKTDAEIAAALRAGILAFNVESEEELHAIDAVAADMGARA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCEN 169
            + LRINP V              S+ G    +              ++ G+  H   + 
Sbjct: 145 PVSLRINPDVDAQTHPYIATGLKESKFGIAMAEARRVYALARTLAHVDIVGVDCHIGSQL 204

Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDY---PVKDFCQR------ 217
                FS  +  +             + ++ +GGG+    +     P     +       
Sbjct: 205 TRTDPFSDAVSRLLGLIEELHADGVALRYLDIGGGLGIPYEGDGAAPPPSPAEYGDAIKS 264

Query: 218 -LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLY 275
            L        + I  EPG  I  N   L T VL       K+  +VD+++   +   L  
Sbjct: 265 ALAPLKLPTPLTIICEPGRVITGNAGALLTRVLYRKHAEAKHFTVVDAAMNDLIRPSLYG 324

Query: 276 QESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                               V G  C +GD          ++ G+ ++      Y     
Sbjct: 325 SYHPMRPVVRAAQRPQQVTDVVGPICESGDFLARDRELPALERGELLAIGAAGAYGFAMA 384

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           + +N        +   D         S    + 
Sbjct: 385 SNYNSRPRAAEVMVRGDRFAVVRARESVEQLFA 417


>gi|224438040|ref|ZP_03658979.1| diaminopimelate decarboxylase [Helicobacter cinaedi CCUG 18818]
 gi|313144485|ref|ZP_07806678.1| diaminopimelate decarboxylase [Helicobacter cinaedi CCUG 18818]
 gi|313129516|gb|EFR47133.1| diaminopimelate decarboxylase [Helicobacter cinaedi CCUG 18818]
          Length = 436

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 66/397 (16%), Positives = 122/397 (30%), Gaps = 36/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP Y+ D QK+ +         +     +  ALK  +   +   L     G    S+ E
Sbjct: 14  KTPLYVYDLQKISSAFLRLKEAFRARKSLICYALKANSNLSIIHHLGTLGSGADCVSIGE 73

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKAQKLHKKIG 119
           V              ++   K           D +     +  +L + +  A+ L+K   
Sbjct: 74  VRRALRAGILKYKIIFSGVGKQDNEIQEALQSDILFLNVESEGELGRIESIAKSLNKVAR 133

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCE-- 168
           +  R+NP++              ++ G   +           S      G+ FH   +  
Sbjct: 134 ISIRVNPNIDAKTHPYISTGLSENKFGVDIQQAKAMYIFAKNSPHIEPVGIHFHIGSQLT 193

Query: 169 -NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP---VKDFCQRLKEFSEK 224
             +     +  +  +          +++  +GGGI    ++       D+ Q + E    
Sbjct: 194 DIEPIKEAAHKVAQLAHSLIALKIDLKFFDVGGGIGIRYEEENLINPYDYAQAILEALYG 253

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I  EPG  +V  +  L T VL    N  K  VI D+++   +    LY  +  I  
Sbjct: 254 LDLTIICEPGRFLVGESGVLLTRVLYEKHNGEKRFVITDAAMNDLMRPT-LYHATHKIEY 312

Query: 284 NTGPYT----------------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
                                   V G  C +GD   +      +  GD +  E+V  Y 
Sbjct: 313 VEKIQNAEHIGERSVESSLCDMCDVVGPICESGDYLAKNIALPKLTHGDLLKIENVGAYG 372

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            +  + +N    P   V              +    +
Sbjct: 373 YSMASNYNTRLRPAEVVIENGRARLIKNRECFESLIS 409


>gi|119776382|ref|YP_929122.1| diaminopimelate decarboxylase [Shewanella amazonensis SB2B]
 gi|119768882|gb|ABM01453.1| diaminopimelate decarboxylase [Shewanella amazonensis SB2B]
          Length = 414

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 62/382 (16%), Positives = 110/382 (28%), Gaps = 23/382 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  +   + + L +   G    S  E
Sbjct: 26  GTPLYVYSRATLERHWHAFDGAVASHPHLICYAVKANSNLAVLNVLARLGSGFDIVSGGE 85

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--K 117
           +    E         ++   K      +  N         + ++L    + A +L K   
Sbjct: 86  LSRVLEAGGDPAKVVFSGVGKTVAEMELALNTGIMCFNLESGAELELLNEVAGRLGKVAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LR+NP V              ++ G   ++      +        V G+  H   +  
Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIPMEEAEALFARAAALPNLAVKGVDCHIGSQLT 205

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
               F   +  +             IE   +GGG+  T           +   + E    
Sbjct: 206 ELKPFLDAMDRMLALIDRLAEQGIVIEHFDVGGGLGVTYNGETPPHPDVYAAAILEKLNG 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++  EPG AI  N     T VL   +N  K  VIVD ++   +   L       I  
Sbjct: 266 RPLKLIFEPGRAIAANAGIFVTQVLYTKDNGDKRFVIVDGAMNDLIRPSLYGAWQNIIPA 325

Query: 284 NTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                      V G  C  GD  G+         GD +       Y     + +N     
Sbjct: 326 VKTNEPTTRCDVVGPVCETGDFLGKDRELA-AGSGDLLVVRSAGAYGFTMASNYNTRPRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDY 362
              + + D           +  
Sbjct: 385 AELMVDGDKAYVVREREKLSQL 406


>gi|90420245|ref|ZP_01228153.1| diaminopimelate decarboxylase [Aurantimonas manganoxydans SI85-9A1]
 gi|90335579|gb|EAS49329.1| diaminopimelate decarboxylase [Aurantimonas manganoxydans SI85-9A1]
          Length = 424

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 63/388 (16%), Positives = 111/388 (28%), Gaps = 25/388 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +         +    +  A+K  +   +  TL     G    S  
Sbjct: 25  VGTPFYCYSTATLTRHYTVFAEAFADIDALVCYAMKANSNQAVLKTLAALGAGADVVSGG 84

Query: 62  EVMLG-HEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKF--KDKAQKLHK 116
           E++         E   ++   K       A+ S        +  +L     +  A     
Sbjct: 85  ELLRALRAGIPAEKIMFSGVGKSVPEIDLALASGIFCFNIESEPELEMIAARAVAAGRTA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            +  RINP V           +   + G   +       +        V+G+  H   + 
Sbjct: 145 HVSFRINPDVDARTHAKISTGKKSDKFGIAYERAEAVYDRARSLPGIAVSGIDMHIGSQI 204

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221
                F    + +    +        I  + LGGG+                + + +K  
Sbjct: 205 VELEPFDQAFERLAGLVRRLRGAGHDIAHVDLGGGLGVPYSRTNTPPPAPPAYAEIVKRH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280
                 ++  EPG  I  N   L T V+ + E   K  VIVD+ +   +   L       
Sbjct: 265 VRDLDCKVVFEPGRLIAANAGILVTRVVYVKEAEGKTFVIVDAGMNDLIRPTLYDAWHDI 324

Query: 281 IYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                 P      A V G  C +GD F        VK GD +       Y   +   +N 
Sbjct: 325 HPVIDDPDAPRLVADVVGPVCESGDYFARARDIPAVKAGDLVYLSSAGAYGAVQSGTYNS 384

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +    +   D         + ++   
Sbjct: 385 RPLIAEVLVKGDAFHAIRPRQTIDEMIA 412


>gi|327402116|ref|YP_004342954.1| diaminopimelate decarboxylase [Fluviicola taffensis DSM 16823]
 gi|327317624|gb|AEA42116.1| diaminopimelate decarboxylase [Fluviicola taffensis DSM 16823]
          Length = 413

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 70/385 (18%), Positives = 124/385 (32%), Gaps = 25/385 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D+ K+++  +       +  VKL  A+K  +   +  TL     G  + S+ E
Sbjct: 14  GTPVYVYDEAKIISQYNRLKNAFGSQEVKLHYAMKALSNINVLKTLKNQGAGLDAVSIEE 73

Query: 63  VMLG-HEKFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           V LG    F      Y        EI+  ++    I  + +S L  F          + +
Sbjct: 74  VHLGLRAGFEASEIMYTPNGVAFSEIEEAVALGVIINIDNLSVLEHFGMV-FGSLVPVCI 132

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIE------SEIKNVNGLMFHNNCENKSFLC 174
           R+NP +              S+ G                  ++ GL  H   +      
Sbjct: 133 RLNPHIMAGGHANISVGHIDSKFGISIHQLRHIQRIVDHYKLHIVGLHMHTGSDIVDADV 192

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL--------KEFSEKYS 226
           F      +  E      ++E++  G G     K+       + +        K F ++Y 
Sbjct: 193 FLQGADLL-YEAATHFPELEFMDFGSGFKVAYKEGDFVTPIEEIGLKIGESFKNFCKEYG 251

Query: 227 VQI--YLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLL--YQESATI 281
            ++  + EPG+ +V+ +  L  +V  + +    +   V+S     +       Y     I
Sbjct: 252 RELELWFEPGKFLVSESGVLLVSVNVVKQTTSTVFLGVNSGQNHLIRPMFYNAYHRIENI 311

Query: 282 YPNTG-PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
               G      V G  C   D FG        K+GD ++  +   Y  +  N +N    P
Sbjct: 312 SNPKGHKKLYSVVGYICET-DTFGYDRPISEAKVGDSLAIYNTGAYGFSMSNQYNSRLRP 370

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
                            S  D   N
Sbjct: 371 AEVYVRDGNAFLIRERESLEDIIRN 395


>gi|329890871|ref|ZP_08269214.1| diaminopimelate decarboxylase [Brevundimonas diminuta ATCC 11568]
 gi|328846172|gb|EGF95736.1| diaminopimelate decarboxylase [Brevundimonas diminuta ATCC 11568]
          Length = 424

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 58/393 (14%), Positives = 114/393 (29%), Gaps = 29/393 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAG-----VKLLLALKCFAAWGMFDTLNQYMDGTT 56
           + TP Y+     L  +                   +  A+K  +   +  TL +   G  
Sbjct: 25  VGTPTYVYSSATLRRHYGLLREACDAHKDALGEALIAFAVKANSNLSVLATLAKLGCGAD 84

Query: 57  SSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK 113
           + S  E+         GE   ++   K     A         I   + ++L++    A  
Sbjct: 85  TVSEGEIRRALAAGVPGERIIFSGVGKTDAELAFAIDVGVRQINVESSAELDRLIAVAAA 144

Query: 114 LHKKIG--LRINPSVSYSKFILADPNRPFSRLGEKCKDK-----IESEIKNVN--GLMFH 164
                   +R+NP +               + G   ++        S   +V   GL  H
Sbjct: 145 KGAAPATAIRVNPKIGAGGHAKITTGGAGDKFGVPVEEAMALYARASASPHVTPVGLACH 204

Query: 165 NNCENKSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKDY----PVKDFCQR 217
              +        A  + + +           I  + LGGG+              D+   
Sbjct: 205 IGSQITDLAPLEAAFRVLRQMTEDLRAQGHSITRLDLGGGLGVPYYGETATPSPADYVAM 264

Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDYLLY 275
                +  +V+   EPG  +  N   L + V+ ++E    +  +++D+++   +   L  
Sbjct: 265 AARVLDGLNVEAAFEPGRLMAANAGVLLSRVIQVNERTDGRRFLVLDAAMNDLMRPALYD 324

Query: 276 QES---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                              V G  C  GD F       P+K GD + F     Y      
Sbjct: 325 AFHDLKPVRPVEGAALPYDVVGPVCETGDTFARDRDLPPLKAGDLVVFMSAGAYGAVMSG 384

Query: 333 WFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            +N   +    + + +         +Y   +  
Sbjct: 385 EYNTRPLAAEVLVDGERYAVIRPRPTYEQMFAR 417


>gi|86747955|ref|YP_484451.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris HaA2]
 gi|86570983|gb|ABD05540.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris HaA2]
          Length = 421

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 58/389 (14%), Positives = 109/389 (28%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +              +  A+K  +   +  TL +   G    S  
Sbjct: 25  VGTPFYCYSTATLERHYRVFSEAFAGTDALVCYAMKANSNQSVLRTLARLGAGADVVSGG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118
           E+              ++   K           D   +   +  +L      A +  +  
Sbjct: 85  ELQRALAAGIPASKIVFSGVGKTEAELRAALAHDIKCLNVESEPELELLSRLAVETGRTA 144

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
              +R+NP V           +  ++ G       E   +        ++G+  H   + 
Sbjct: 145 RISIRVNPDVDSGTHAKISTGKSENKFGIPLVHAREVYARAAKLPGILISGVDVHIGSQI 204

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEF 221
                  A  + +     +       I  +  GGG+     +          + Q +K  
Sbjct: 205 IDLAPMEAAFRLVAEFVHQLRGDGHTISHVDFGGGLGIPYYEDRDAPPEPFAYAQMVKRV 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
           +      +  EPG  IV N   L   V+ +   + K  VI+D+++   +   L       
Sbjct: 265 THNLGCALLFEPGRMIVGNAGILVARVIYVKHGDGKTFVIIDAAMNDLIRPTLYEAYHEI 324

Query: 281 I-----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +      P     TA V G  C  GD          +K GD I+      Y   +   +N
Sbjct: 325 LPVAAPAPGAKLITADVVGPVCETGDYLALDRQLPELKSGDLIAIMTAGAYGAVQACTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    +   D                
Sbjct: 385 TRALVPEVLVKDDQYAVVRPRIEVEQLIA 413


>gi|320106738|ref|YP_004182328.1| diaminopimelate decarboxylase [Terriglobus saanensis SP1PR4]
 gi|319925259|gb|ADV82334.1| diaminopimelate decarboxylase [Terriglobus saanensis SP1PR4]
          Length = 437

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 69/391 (17%), Positives = 125/391 (31%), Gaps = 30/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+    +++           +    +  A+K  +A G+   L     G    S  E
Sbjct: 42  GTPLYVYSAAQMVERAGMFAREFADVQHTVCYAVKANSALGVLKLLAAQGCGFDIVSGGE 101

Query: 63  VMLG-------HEKFGGETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114
           +            +  G      V  +  E   A+          +  +L    ++A KL
Sbjct: 102 LERVIRAAGDKRAEVCGRVVFSGVGKQPAEIDLALREGILLFNVESEGELELVAERAAKL 161

Query: 115 HKKIG--LRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHN 165
             K    LR+NP V               + G   +          + +     G+  H 
Sbjct: 162 KIKARIALRVNPDVFAETHPYISTGLREHKFGIDIRLARKVYKRAAQLKWLEPAGVSVHI 221

Query: 166 NCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD------FCQ 216
             + +S   F+   + +  + K+       I +   GGG+         +       + +
Sbjct: 222 GSQIRSVEPFAAALSRVVALIKQLRADGHDIRYADAGGGLGIDYGAGNFEPAKQVAKYAK 281

Query: 217 RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLY 275
            LK       + + LEPG  IV     L + VL + +N  K  VI D+++   +   L  
Sbjct: 282 ALKGALGTMDLHLLLEPGRFIVAQAGALVSQVLFVKKNGTKTFVIADAAMNDLIRPALYQ 341

Query: 276 QESATI---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                +     +       V G  C +GD F       P+K GD I+  D   Y ++  +
Sbjct: 342 AHHEIVPLKQTSRKLRKVDVVGPVCESGDFFARDREMAPLKRGDGIALLDAGAYGLSLSS 401

Query: 333 WFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
            +N    P   +          R  +  D +
Sbjct: 402 NYNTRVRPAEVLIERGKARLIRRRETVEDLF 432


>gi|83313590|ref|YP_423854.1| diaminopimelate decarboxylase [Magnetospirillum magneticum AMB-1]
 gi|82948431|dbj|BAE53295.1| Diaminopimelate decarboxylase [Magnetospirillum magneticum AMB-1]
          Length = 424

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 60/392 (15%), Positives = 110/392 (28%), Gaps = 26/392 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           + TP+Y      L  +        K AG    +  A K      +  T  Q   G    S
Sbjct: 25  VGTPFYCYSTATLQRHYTVFAEALKAAGLDATICFAAKANPNMAVIRTFAQLGAGADVVS 84

Query: 60  LYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKA--QKL 114
             E+              ++   K               I   +  +L    + A  +  
Sbjct: 85  EGELRQALAAGVPAARIVFSGVGKTRHELEFAVAKGIFQINVESEPELEMLSEIAAARGQ 144

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-----KNVNGLMFHNNCEN 169
              I +R+NP V           +  ++ G +     E          V  +    +  +
Sbjct: 145 VMPIAIRVNPDVDAGTHAKITTGKKENKFGIEWTRAREVYARAKALPGVEPVAIACHIGS 204

Query: 170 K-----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEF 221
           +      F      ++++          I  + LGGG+     D    +       +K  
Sbjct: 205 QLTELTPFREAFLRVRDLVAMLRADGIDIRRLDLGGGLGVPYDDETPPEPAAYAEVIKAT 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESAT 280
                 +   EPG  +V N   L + ++ + E       IVD+++       L     + 
Sbjct: 265 LGDLGCRFVFEPGRLLVGNAGILVSRIIRVKEGSTRTFLIVDAAMNDLARPSLYDAYHSI 324

Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                           V G  C  GD F +     P++  D ++F     Y     + +N
Sbjct: 325 FPVAEPKAGAALAEVDVVGPVCETGDTFAKQRRLPPMRTDDLLAFGTAGAYGAAMSSTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367
              +    +             SY D  +  S
Sbjct: 385 TRPLIPEVLVKGGDYAVIRVRPSYEDMRSLES 416


>gi|89099060|ref|ZP_01171939.1| diaminopimelate decarboxylase [Bacillus sp. NRRL B-14911]
 gi|89086190|gb|EAR65312.1| diaminopimelate decarboxylase [Bacillus sp. NRRL B-14911]
          Length = 439

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 62/399 (15%), Positives = 122/399 (30%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   +           +  GVK  +  A K F++  M     +        S 
Sbjct: 30  GTPVYVYDVALIRERARGFRQTFEELGVKSQVAYASKAFSSIAMIQLAEEEGLSLDVVSG 89

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E   ++   K  E   +        I+ +   +L   K   +  + K
Sbjct: 90  GELYTALAAEFPVERIHFHGNNKSREELEMALHYGVGCIVVDNFDELELLKSVCENKNTK 149

Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
             I LR+ P +           +  S+ G            K  I +      G+  H  
Sbjct: 150 TKILLRVTPGIEAHTHDYILTGQEDSKFGFDLQNGQAEAALKQAISTPWLETLGIHCHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEW----ISLGGGIHFTDKDYPVKDFC------- 215
            +      F    + I ++   +  ++ +    ++LGGG      D              
Sbjct: 210 SQIFETTGFILAAEKIFEKLSIWKKELAYEPAVLNLGGGFGIRYTDEDAPIAASKYVEEI 269

Query: 216 ----QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269
               ++L    +    +I++EPG ++V +  T         +         VD  +  ++
Sbjct: 270 ISEVKKLAGSYQMEMPEIWIEPGRSLVGDAGTTLYKTGSRKDVPNVRHYLAVDGGMSDNI 329

Query: 270 PDYLLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   +  N        T  + G+ C +GD+          +  D ++      
Sbjct: 330 RPALYQAKYEAVLANRPLEKAEETVSIAGKCCESGDMLIWDLPLPKAEREDLLAVFCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  N +N I  P +           ++  S+ D   
Sbjct: 390 YGYSMANNYNRIPRPPVVFVENGEARLVVKRESFEDLIR 428


>gi|74316244|ref|YP_313984.1| diaminopimelate decarboxylase [Thiobacillus denitrificans ATCC
           25259]
 gi|74055739|gb|AAZ96179.1| diaminopimelate decarboxylase [Thiobacillus denitrificans ATCC
           25259]
          Length = 414

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 57/380 (15%), Positives = 113/380 (29%), Gaps = 23/380 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L                 +  A+K  ++  + +   +   G    S  E
Sbjct: 26  GTPLYVYSRAALEAAYRAYEEAFAATPHLICYAVKANSSLALLNLFARMGAGFDIVSGGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +      +       ++   K  D    A+ +        + S+L++    A +L K   
Sbjct: 86  LARVLSAQGDPRKVVFSGVGKRVDEMRAALEAGILCFNVESTSELHRLNRVAGELGKVAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           +  R+NP V              ++ G    +               V G+  H   +  
Sbjct: 146 VSFRVNPDVDPKTHPYISTGLKENKFGVPIAEAPALYRTAAALPHIRVTGIDCHIGSQLL 205

Query: 171 SFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                +     +             +E I LGGG+  + +      +  + + L E    
Sbjct: 206 DLSPLADAADRVFALVDALAAEGIALEHIDLGGGVGISYRGETAPDLAGYGRVLAERFAG 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
               + +EPG ++V N   L   V  +     KN  IVD+++   +   L       +  
Sbjct: 266 RRETLIVEPGRSLVGNAGLLLARVEYLKLGADKNFAIVDAAMNDLMRPALYEAYHEIVEV 325

Query: 284 NTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              P       V G  C  GD  G       +  GD ++      Y ++  + +N     
Sbjct: 326 IARPLPKRRYDVVGPICETGDFLGSARELS-LDEGDLVALLSSGAYGMSMSSNYNSRPRA 384

Query: 341 TIAVKNVDGTIKAIREFSYN 360
              + +           +  
Sbjct: 385 AEILVDKKEIHLIRERETQE 404


>gi|254560913|ref|YP_003068008.1| diaminopimelate decarboxylase [Methylobacterium extorquens DM4]
 gi|254268191|emb|CAX24106.1| diaminopimelate decarboxylase [Methylobacterium extorquens DM4]
          Length = 422

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 60/389 (15%), Positives = 112/389 (28%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +              +  A+K  +   +  TL     G    S  
Sbjct: 25  VGTPFYCYSTATLERHYRVFAEAFAGDDALVCFAMKANSNQAVLATLAHQGAGMDIVSEG 84

Query: 62  EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116
           E+         GE   ++     ++    A+ +N       +  +L    + A  +    
Sbjct: 85  ELRRALAAGVPGERIVFSGVGKTREEMAAALDANILCFNVESEPELAALSEVAVARGRKA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
            + +R+NP V           +  ++ G                    + G+  H   + 
Sbjct: 145 PVSIRVNPDVDALTHAKISTGKSDNKFGIPISRARAVYAGAARLPGLEIVGVDAHIGSQI 204

Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221
                F    + + +          ++  +  GGG+                    L+  
Sbjct: 205 TDLTPFDNAARLLCELARDLLADGHRLHHVDFGGGLGIPYRDDNAPPPDPAALAAILRPH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESAT 280
            +   ++   E G  I  N   L T V+ +   + K  VIVD ++   +   L     A 
Sbjct: 265 FKPLGLRPVFEIGRMIAGNAGILVTRVIYVKPTDEKTFVIVDGAMNDLIRPTLYEAFHAL 324

Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                        TA V G  C +GD          V  GD I+      Y   +   +N
Sbjct: 325 RPVRKPAPNTPRLTADVVGPVCESGDYLALGREMPMVAPGDLIAVMSAGAYGAVQACTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    +   D +       SY+D   
Sbjct: 385 SRRLVPEVLVTGDRSAVVRPRPSYDDLIR 413


>gi|126179859|ref|YP_001047824.1| diaminopimelate decarboxylase [Methanoculleus marisnigri JR1]
 gi|125862653|gb|ABN57842.1| diaminopimelate decarboxylase [Methanoculleus marisnigri JR1]
          Length = 430

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 57/391 (14%), Positives = 122/391 (31%), Gaps = 31/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D+ ++  N              +++L A K      +F TL     G    S 
Sbjct: 29  GTPLYVTDEMRIRGNFQRLSGALTAHYPKIRVLYAAKANGNLAIFKTLASQGAGADVFSA 88

Query: 61  YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
            EV L                +    ++   +     +  ++  +L +    A       
Sbjct: 89  GEVALALAAGMLPSSLLFNGSSKTPADLALAVEKGIRVSVDSPDELRQLDRAAGAAGTTV 148

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV-------NGLMFHNNCEN 169
           +I  R+NP++              S+ G      +++  + +        G+  H   + 
Sbjct: 149 EIAFRVNPAIEVPTHPKIATGLATSKFGIPAGQILDAYREALALEHVKPVGIHCHIGSQI 208

Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221
                F+  ++ +             + +I +GGG+              +++ + +   
Sbjct: 209 LDVEPFAHEVEVLIDVARDLLDIGVNLSFIDIGGGLGIPYHRETDRAPTPEEYAEAVMPV 268

Query: 222 SEK------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY 275
             +         ++++EPG  ++ ++T L T V  +    K    VD+     V   +  
Sbjct: 269 FLRGIKELGIEPELWVEPGRWLIGDSTVLLTRVNSVKTAHKTFANVDAGFNLLVRPTMYD 328

Query: 276 QESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                +  N           V G  C  GDI  +      ++ GD I+  D   Y     
Sbjct: 329 SYHEVVAANRADAPAVREYSVTGPICETGDILAKDRMLPELEAGDLIAVLDAGAYGFAMS 388

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
           + +N        +   +      R  + +D 
Sbjct: 389 SQYNSRPRCAEVLLAGEKAALMRRAETIDDL 419


>gi|239832987|ref|ZP_04681316.1| diaminopimelate decarboxylase [Ochrobactrum intermedium LMG 3301]
 gi|239825254|gb|EEQ96822.1| diaminopimelate decarboxylase [Ochrobactrum intermedium LMG 3301]
          Length = 421

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 64/389 (16%), Positives = 122/389 (31%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+  +  +  +              +  ALK  +   +  TL +   G  + S  
Sbjct: 25  VGTPFYVYSRATVERHFRVFSEAFAGMETLVTYALKANSNQAVLKTLAKLGAGADTVSEG 84

Query: 62  EVMLGH-EKFGGETHAYNV-AYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116
           E+              ++       E+D A+ +        +  +L     +A +  K  
Sbjct: 85  EIRRALAAGIPANKIVFSGVGKTPHEMDFALEAGIYCFNVESEPELEILSARAVRAGKVA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            + LRINP V           +  ++ G       E+  +       +V G+  H   + 
Sbjct: 145 SVSLRINPDVDAKTHAKISTGKSENKFGIPRVKAREAYARAASLPGLDVVGIDMHIGSQI 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221
                F      + +   E       I  + +GGG+    +           + + +   
Sbjct: 205 IDLEPFDDAFALMAQLVKELQADGHNIRHVDVGGGLGIPYRTDNTPPPLPVAYAEIVARH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278
            +   ++   EPG  IV N   L T V+ + E + KN VIVD+++   +   L       
Sbjct: 265 IKPLGLKTVFEPGRLIVGNAGLLVTEVIFVKEGDAKNFVIVDAAMNDLIRPTLYDAFHDI 324

Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                   +     A   G  C  GD  G          GD I+      Y     + +N
Sbjct: 325 KPVTLPKDDAPRIRADFVGPVCETGDYLGLDREVAKPAPGDLIAVCTTGAYGAVLSSTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    + + D         +Y +   
Sbjct: 385 SRLLIPEVLVDGDRYHVVRPRRTYEELLA 413


>gi|329118402|ref|ZP_08247108.1| diaminopimelate decarboxylase [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327465448|gb|EGF11727.1| diaminopimelate decarboxylase [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 406

 Score =  231 bits (588), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 64/385 (16%), Positives = 119/385 (30%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L                 +  A+K      +     +   G    S  E
Sbjct: 18  GTPLYVYSQSALDEAFAAYQTAFAALNPLICYAVKANGNLSLIRRFAELGSGFDIVSGGE 77

Query: 63  VMLGHEKFG--GETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +       G   +T    V     E++    +        ++ +L +    A +L+    
Sbjct: 78  LARVLAAGGSAAKTIFSGVGKSAAEMEYALKAGIKCFNVESLPELERLNGIAGRLNTRAP 137

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           + LRINP V              ++ G   +D   +           + G+  H   +  
Sbjct: 138 VSLRINPDVDAQTHPYISTGLKANKFGIAMRDAEAAYARAAELPHLRIVGIDCHIGSQLI 197

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
                    + I            +++ I LGGG+    +D    D   +   +++    
Sbjct: 198 RLDPLIEACERILALADRLAAQGIELQHIDLGGGVGIVYRDEDTPDLSAYAAAVQKLIGS 257

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES---AT 280
             + + LEPG ++V N   L T V  +     KN VIVD+++   +   L          
Sbjct: 258 RPLGLILEPGRSLVGNAGDLLTRVEYVKRNEDKNFVIVDAAMNDLMRPALYQAYHRIEPA 317

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
             P   P+TA + G  C  GD   +       + GD +       Y  +    +N     
Sbjct: 318 EPPAAAPFTADIVGPVCETGDFLAKDRRIA-AQAGDLLVVRGAGAYAASMAGNYNARRRA 376

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + +        R  +  +   N
Sbjct: 377 AEVLVSGSQARLVRRRETVEEMLAN 401


>gi|323135718|ref|ZP_08070801.1| diaminopimelate decarboxylase [Methylocystis sp. ATCC 49242]
 gi|322398809|gb|EFY01328.1| diaminopimelate decarboxylase [Methylocystis sp. ATCC 49242]
          Length = 421

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 65/389 (16%), Positives = 118/389 (30%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      +  +              +  A+K  +   +   L +   G    S  
Sbjct: 25  VGTPFYCYSAATIRRHFRVFAQAFDGLDAMVCYAMKANSNQAVLRLLAKEGAGMDVVSGG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHKKI 118
           E+         G    Y+   K  E  A   + D   FN  +  +L      A ++ K  
Sbjct: 85  ELARALAAGAPGGRITYSGVGKTEEEIAAALDADIFCFNVESEPELEAISRVATRMGKVA 144

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
              LR+NP V           +  ++ G       E   +       ++ G   H   + 
Sbjct: 145 RVSLRVNPDVDARTHKKISTGKAENKFGVPLSHAREVYARAAKFRGVDITGADMHIGSQL 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKD------YPVKDFCQRLKE 220
                F      + +   +       I  + LGGG+     +      Y  + +   +++
Sbjct: 205 TDLEPFDEAFSLLAELVVDLRADGHHISHVDLGGGLGIPYHEGDDPQSYHPERYAAIVRK 264

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESA 279
                + ++ LEPG  IV N   L T V+ +     K  VIVD+ +   V   L      
Sbjct: 265 HFAGLNCKLVLEPGRLIVGNAGVLVTRVIYVKHGEAKTFVIVDAGMNDLVRPTLYDAHHD 324

Query: 280 TIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
            I           TA V G  C  GD           + G+ ++      Y   +   +N
Sbjct: 325 IIPVRAAADREEITADVVGPVCETGDYLALDRKMPEARPGELLAVLTAGAYGAVQAGTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    + + +         S  +   
Sbjct: 385 TRPLIPEVLVDGERFAVIRPRPSVAELIA 413


>gi|332139612|ref|YP_004425350.1| putative diaminopimelate decarboxylase [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327549634|gb|AEA96352.1| putative diaminopimelate decarboxylase [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 416

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 69/384 (17%), Positives = 123/384 (32%), Gaps = 25/384 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +  G+   L +   G    S  E
Sbjct: 26  GTPVYIYSRATLERHWHAFNDAIGEHPHLVCYAVKANSNIGVLSVLAKLGSGFDIVSAGE 85

Query: 63  -VMLGHEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117
              +           ++      D    A+          +  +L++  + A +  +   
Sbjct: 86  LARVIEAGGDASKVVFSGVGKKHDEIRYALEQGIMCFNVESEPELHRINEVAGEVGVKAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LRINP V              ++ G   +  + +          NV G+  H   +  
Sbjct: 146 ISLRINPDVDAKTHPYISTGLKANKFGIARERALATYELAASLPNLNVVGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F   L+    +  E       IE + +GGG+  T       +P        ++   
Sbjct: 206 EIGPFVDALERLLVLIDELAERNIIIEHLDVGGGLGVTYNDEEPPHPKAYAQAMAEKMVG 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIY 282
           + ++++ LEPG AI  N   L T V  I E   K+  IVD+++   +   L       I 
Sbjct: 266 RENLKLILEPGRAIAANAGILVTEVEFIKEGEEKSFAIVDAAMNDLLRPALYSAWQKIIP 325

Query: 283 PNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
                    +T  V G  C  GD  G+      ++  D ++      Y     + +N   
Sbjct: 326 VKEESTAKLHTYDVVGPVCETGDFIGKDRELA-IEPTDLLAVRSAGAYGFVMASNYNSRC 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362
            P   + + D  I         D 
Sbjct: 385 RPAEIMVDGDKAIVVREREKQKDL 408


>gi|262404862|ref|ZP_06081416.1| diaminopimelate decarboxylase [Vibrio sp. RC586]
 gi|262348946|gb|EEY98085.1| diaminopimelate decarboxylase [Vibrio sp. RC586]
          Length = 417

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 57/380 (15%), Positives = 110/380 (28%), Gaps = 24/380 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  +  G+ +TL +   G    S+ E
Sbjct: 27  GTPLYVYSRATLERHWHAFDKSVGDYPHLICYAVKANSNLGVLNTLARLGSGFDIVSVGE 86

Query: 63  VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++   K       A+          +  +L++    A +L     
Sbjct: 87  LERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKIKCFNVESEPELHRLNKVAAELGVKAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LRINP V              ++ G       E           +V+G+  H   +  
Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGITFDRAAEVYRLAHSLQNLDVHGIDCHIGSQLT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
           +   F         +          I  + +GGG+    +D       +  K   ++   
Sbjct: 207 ALAPFIDATDRLLALIDSLKTEGIHIRHLDVGGGLGVVYRDELPPQPSEYAKALLDRLER 266

Query: 228 QI----YLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQE---SA 279
                   EPG AI  N   L T V  +         I+D+++   +   L         
Sbjct: 267 HRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHKNFAIIDAAMNDLIRPALYQAWQDIIP 326

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                    T  + G  C   D  G+      ++ GD ++      Y     + +N    
Sbjct: 327 LRPRQGEAQTYDLVGPVCETSDFLGKDRDLV-LEEGDLLAVRSSGAYGFTMSSNYNSRPR 385

Query: 340 PTIAVKNVDGTIKAIREFSY 359
               + +        +  + 
Sbjct: 386 VAEVMVDGIKAHLVRQRETL 405


>gi|254788013|ref|YP_003075442.1| diaminopimelate decarboxylase [Teredinibacter turnerae T7901]
 gi|237687153|gb|ACR14417.1| diaminopimelate decarboxylase [Teredinibacter turnerae T7901]
          Length = 421

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 54/386 (13%), Positives = 110/386 (28%), Gaps = 25/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +  +              +  A+K  ++  +   L Q   G    S  E
Sbjct: 26  DTPCYVYSRASIEQSYQAYASALGAHPGMICYAVKANSSLAVLQVLAQQGAGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +          +   ++      +    A+          + ++L      AQ +     
Sbjct: 86  LQRVLAAGGSADRVIFSGVGKKAEEMRFALQQQIACFNVESAAELETLAQVAQAMGTTAR 145

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCENK 170
             LR+NP V  +           ++ G          +     +  +V G+  H   +  
Sbjct: 146 VSLRVNPDVDANTHPYISTGLKENKFGVDIQTALDVYRRAASLDGIDVVGIDCHIGSQLT 205

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
               F   L  +     +       I  + LGGG+  T  +         + +   K   
Sbjct: 206 QLAPFMDALDRVLALMDQLAEEGITIRHLDLGGGLGVTYNNEQPPSPADYVGQVIAKLGD 265

Query: 228 QIY---LEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES----- 278
           +      EPG +IV N   L T VL +         I+D+++  ++   L          
Sbjct: 266 RAVALMFEPGRSIVANAGVLLTRVLYLKPTEHKNFAIIDAAMNDNIRPSLYQAWQRVLPV 325

Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
                +       + G  C  GD   +      +  G  ++      Y     + +N   
Sbjct: 326 IAPEESEPTQQWDLVGPVCETGDWLAKDRALA-LHEGSVLALMSSGAYGFTMSSNYNSRT 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364
                + + D         ++ D   
Sbjct: 385 RAAEIMVDGDKHHLIRARETFADLVR 410


>gi|260767552|ref|ZP_05876488.1| diaminopimelate decarboxylase [Vibrio furnissii CIP 102972]
 gi|260617452|gb|EEX42635.1| diaminopimelate decarboxylase [Vibrio furnissii CIP 102972]
          Length = 417

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 57/378 (15%), Positives = 112/378 (29%), Gaps = 24/378 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  +  G+ +TL +   G    S  E
Sbjct: 27  GTPLYVYSRATLERHWHAFDKSVGDHPHLVCYAVKANSNLGVLNTLARLGSGFDIVSAGE 86

Query: 63  V-MLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +  +           ++   K       A+          + S+L +    A    +   
Sbjct: 87  LERVVAAGGDPAKVVFSGVGKTAAEMKRALALKIKCFNVESESELERLNQVAGEMGVKAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LRINP V              ++ G       +           +++G+  H   +  
Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAPDVYRLAQRLDHISIHGIDCHIGSQLT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
           +   F         +          I+ + +GGG+           P +     L   + 
Sbjct: 207 AIEPFIDATDRLLALIDNLKAEGIHIKHLDVGGGLGVVYRDELPPQPSEYAKALLSRLAN 266

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279
              +++  EPG AI  N   L T V  +         I+D+++   +   L         
Sbjct: 267 HQELELIFEPGRAIAANAGVLLTRVEYLKHTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                    T  + G  C  GD  G+      ++ GD ++      Y     + +N    
Sbjct: 327 VSPREGAALTYDLVGPVCETGDFLGKDRSLV-LQQGDLLAVRSAGAYGFAMSSNYNTRTR 385

Query: 340 PTIAVKNVDGTIKAIREF 357
               + +   T    +  
Sbjct: 386 AAEVIVDGGTTHVVRQRE 403


>gi|256059955|ref|ZP_05450139.1| diaminopimelate decarboxylase [Brucella neotomae 5K33]
 gi|261323926|ref|ZP_05963123.1| diaminopimelate decarboxylase [Brucella neotomae 5K33]
 gi|261299906|gb|EEY03403.1| diaminopimelate decarboxylase [Brucella neotomae 5K33]
          Length = 421

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 66/389 (16%), Positives = 120/389 (30%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+  +  +  +         +    +  ALK  +   +   L +   G  + S  
Sbjct: 25  VGTPFYVYSRATIERHFRVFHDAFADMDTLVTYALKANSNQAVLTALAKLGAGADTVSQG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHK 116
           E+              ++ A K       A+ +        +  +L     +  A     
Sbjct: 85  EIRRALAAGIPANRIVFSGAGKTPREMDFALEAGIYCFNVESEPELEILSARAVAAGKVA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            + LRINP V           +  ++ G        +  +       NV G+  H   + 
Sbjct: 145 PVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARAAYARAASLPGLNVVGIDMHIGSQI 204

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221
                F      +    KE       I  + +GGG+            P   + Q + + 
Sbjct: 205 IDLEPFDNAFALMAELVKELQADGHNIRHVDVGGGLGIPYRTDNTPPPPPVAYAQIVAKH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278
            +  S++   EPG  IV N   L T V+ + E + KN VIVD+++   +   L       
Sbjct: 265 IKPLSLKTVFEPGRLIVGNAGLLVTEVIFVKEGDAKNFVIVDAAMNDLIRPTLYDAFHDI 324

Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                   N     A   G  C  GD  G          GD I+      Y     + +N
Sbjct: 325 RPVIMPNDNAPRIRADFVGPVCETGDYLGLDREVAKPAPGDLIAICTTGAYGAVLSSTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    + + +         +Y +   
Sbjct: 385 SRLLIPEVLVDGERYHVVRPRRTYEELLA 413


>gi|118443019|ref|YP_877435.1| diaminopimelate decarboxylase [Clostridium novyi NT]
 gi|118133475|gb|ABK60519.1| diaminopimelate decarboxylase [Clostridium novyi NT]
          Length = 432

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 68/399 (17%), Positives = 120/399 (30%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           KTP Y++D++ +  N        K      K+  A K F    M   +N+        S 
Sbjct: 29  KTPLYVMDEELIRENCRRYRENFKGNNEVNKVAYAGKAFLTIAMCQLINEEGMCLDVVSG 88

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+      +F  E   ++   K  E   +         + +   ++      A      
Sbjct: 89  GELYTAYKSEFPMEKIYFHGNNKTLEEIDMGVRLGVGRFVADNFYEIENINKIAKKYDKV 148

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
           +KI LRI P +           +  S+ G                +       G   H  
Sbjct: 149 QKILLRITPGIEAHTHDYIKTGQIDSKFGFTLLQNQTLKAVEMANKFSNIEFVGFHCHIG 208

Query: 167 CENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK--- 219
            +      +      ML  I++        I+ + LGGG              +      
Sbjct: 209 SQIFEIEPYRDEVRIMLALIKEVKEKLGCTIKELDLGGGFGIYYGKGDSPKKIEDFCSAI 268

Query: 220 --------EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
                   +  +     + +EPG +IV N  T   TV  I E  +    V     +  ++
Sbjct: 269 LEEAVKVSKELDIELPSLVIEPGRSIVGNAGTTLYTVGSIKEIPEIRKYVSVDGGMTDNI 328

Query: 270 PDYLLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +  N           + G+ C +GDI  E       + GD ++      
Sbjct: 329 RPALYRASYECLVANNVKAKSKEKVTISGKCCESGDILLENVKVSHAESGDILAVLTTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  + +N I  P +   N   +    +  SY D  +
Sbjct: 389 YGYSMSSNYNKIPRPAVVFVNRGQSKLICKRQSYEDLVS 427


>gi|94970467|ref|YP_592515.1| diaminopimelate decarboxylase [Candidatus Koribacter versatilis
           Ellin345]
 gi|94552517|gb|ABF42441.1| diaminopimelate decarboxylase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 427

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 69/390 (17%), Positives = 116/390 (29%), Gaps = 29/390 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y      +    D            +  ++K  +   +   L +   G    S  E
Sbjct: 34  GTPLYTYSATTIRERFDIFNRAFGKVPHTICYSVKANSNLTILKMLVKLGSGFDVVSGGE 93

Query: 63  VMLGH---EKFGGETHAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           +       +K   +     V         A+ S+       + S+L     +A KL KK 
Sbjct: 94  LERVLVVDKKAAKKVVFSGVGKTAPEMDLAIKSDILLFNIESESELELLASRASKLRKKP 153

Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCEN 169
            +  R+NP V               + G               +E     G+  H   + 
Sbjct: 154 RIAFRVNPDVPAETHPYISTGLREHKFGVPITDAALLYAQAASTEWLEPAGVSVHIGSQI 213

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKDFC---------QR 217
                F+A ++ +    +        I  I  GGG+    +D                  
Sbjct: 214 TDVAPFNATMERVADLVRGLRAQGHNIRLIDGGGGLGIAYRDGDTSLKAFEASAKNYSAA 273

Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQ 276
           L        + + LEPG AI+     L T V+       K  VIVD+ +   +   L   
Sbjct: 274 LLPPLNSLGIHLLLEPGRAIIGPAGALLTRVVYSKKNGRKTFVIVDAGMNDLIRPALYGA 333

Query: 277 ESATIY---PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
               +      TG  T  V G  C  GD F        ++ GD ++  D   Y +++ + 
Sbjct: 334 YHEIVAAEPRGTGAETVDVVGPVCETGDFFARDRELTHLEEGDLVAILDAGAYGMSQTSN 393

Query: 334 FNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
           +N    P   +          R  +  D  
Sbjct: 394 YNTRPRPAEVLVEGSRAKVVRRRETIKDLL 423


>gi|322435524|ref|YP_004217736.1| diaminopimelate decarboxylase [Acidobacterium sp. MP5ACTX9]
 gi|321163251|gb|ADW68956.1| diaminopimelate decarboxylase [Acidobacterium sp. MP5ACTX9]
          Length = 433

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 69/388 (17%), Positives = 126/388 (32%), Gaps = 26/388 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +Q +L  L        +    +  A+K  +A  +   L Q   G    S  E
Sbjct: 42  GTPLYVYSQQHILGRLALFQQAFASRPHTICYAVKANSALAILKLLAQNGAGFDIVSGGE 101

Query: 63  VMLGHEKFGG--ETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           +    +      +   +    K       A+ +        + S+L    D+A+ L    
Sbjct: 102 LARVVKAAKPAVKKTVFAGVGKQIPEIDAALKAGILLFNVESESELALLADRAELLKIPA 161

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCEN 169
              LR+NP V               + G          +   +S+     G+  H   + 
Sbjct: 162 RFSLRVNPDVFAETHPYISTGLSAHKFGIDINAARAIYRKAAKSKYLIPTGVSVHIGSQI 221

Query: 170 KSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSE 223
           ++   F A L  +    ++       +  I  GGG+          P        K+  E
Sbjct: 222 RAVDPFGAALDRVTSLIQQLKKDGITLTHIDAGGGLGIEYTDAPFDPAAAVAAYAKQVLE 281

Query: 224 ---KYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQES- 278
                 + + LEPG  +V     L TTV+++ +N  K  VI D+ +   +   L      
Sbjct: 282 ATDHLDLHLLLEPGRFLVAQAGALLTTVVNVKKNGNKTFVITDAGMNDLIRPALYQAHHQ 341

Query: 279 --ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                  +       + G  C +GD F         K GD ++  D   Y ++  + +N 
Sbjct: 342 ILPVRQTSAKSSPVDIVGPVCESGDFFARDRDLPATKPGDLLAILDAGAYGMSLTSNYNT 401

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364
              P   + +   +    R  +  D + 
Sbjct: 402 RTRPPEVLVDGAESRLIRRRETIKDLFA 429


>gi|188580974|ref|YP_001924419.1| diaminopimelate decarboxylase [Methylobacterium populi BJ001]
 gi|179344472|gb|ACB79884.1| diaminopimelate decarboxylase [Methylobacterium populi BJ001]
          Length = 422

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 59/389 (15%), Positives = 112/389 (28%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +              +  A+K  +   +  TL +   G    S  
Sbjct: 25  VGTPFYCYSTATLERHYRVFAQAFAGDDALVCFAMKANSNQAVLATLARQGAGMDIVSEG 84

Query: 62  EVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116
           E+         GE   ++     ++    A+ +N       +  +L    + A  +    
Sbjct: 85  ELRRALAAGVPGERIVFSGVGKTREEMAAALDANILCFNVESEPELAALSEVAASRGRKA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
            + +R+NP V           +  ++ G                    + G+  H   + 
Sbjct: 145 PVSIRVNPDVDALTHAKISTGKSDNKFGIPISRARAVYAGAARLPGLEIVGVDAHIGSQI 204

Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221
                F    + + +          ++  +  GGG+                    L+  
Sbjct: 205 TDLTPFDNAARLLCELARDLLADGHRLHHVDFGGGLGIPYRDDNAPPPDPAALAAILRPH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESAT 280
            +   ++   E G  I  N   L T V+ +   + K  VIVD ++   +   L     A 
Sbjct: 265 FKPLGLRPVFEIGRMIAGNAGILVTRVIYVKPTDEKTFVIVDGAMNDLIRPTLYEAFHAL 324

Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                        TA V G  C +GD             GD I+      Y   +   +N
Sbjct: 325 RPLREPAPDTPRLTADVVGPVCESGDYLALGREMPMAAPGDLIAVMSAGAYGAVQAGTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    + + D         SY+D   
Sbjct: 385 SRRLVPEVLVSGDRAAVVRPRPSYDDLIR 413


>gi|160872806|ref|ZP_02062938.1| diaminopimelate decarboxylase [Rickettsiella grylli]
 gi|159121605|gb|EDP46943.1| diaminopimelate decarboxylase [Rickettsiella grylli]
          Length = 417

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 65/388 (16%), Positives = 130/388 (33%), Gaps = 27/388 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+  K +L              G ++  A+K  +   +   L  +  G    S  E
Sbjct: 25  GSPCYIYSKSRLYEQWCAFKS-FIQNGHQICYAVKANSNLAILALLAHWGAGFDIVSGGE 83

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117
                      E   ++   K CE    A+ ++       +  +L + +  A+       
Sbjct: 84  FDRVLRAGGHAENTVFSGVGKTCEEIKSALFAHIGCFNVESSGELFRIEALAKNIGAVAP 143

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           I LR+NP++              ++ G   KD +             + G+  H   +  
Sbjct: 144 IALRVNPNIDPKTHPYITTGLNDTKFGLNEKDALTLYRYAAQSNHLTIRGISCHLGSQIT 203

Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS----- 222
           +   F   L+++ K           ++ I+LGGG+  T +   V    +  ++       
Sbjct: 204 TIDPFLQALEHLLKLTEALKKEHILLKTINLGGGLGVTYQTENVPSVQEYSQKILALLKK 263

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATI 281
              ++ + LEPG A++     L T V  +   + K+  IVD+ +   +   L   E A +
Sbjct: 264 RNSTLTLILEPGRALIAQAGILVTKVEYLKSNHRKHFAIVDAGMNDLIRPALYQAEHAIL 323

Query: 282 ----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                         + G  C + D FG+      ++ GD ++  D   Y  +  + +N  
Sbjct: 324 PIVQRSLPRKKKYDIVGPICESSDFFGKNRELV-LRAGDYLAIMDSGAYGFSMSSNYNSR 382

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYNN 365
                 + + D         +      N
Sbjct: 383 PRAAELMVDTDRVFLIRSRETLAQLLAN 410


>gi|34556768|ref|NP_906583.1| diaminopimelate decarboxylase dap decarboxylase [Wolinella
           succinogenes DSM 1740]
 gi|34482482|emb|CAE09483.1| DIAMINOPIMELATE DECARBOXYLASE DAP DECARBOXYLASE [Wolinella
           succinogenes]
          Length = 401

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 70/384 (18%), Positives = 122/384 (31%), Gaps = 21/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D  ++ +               +  A+K  +   +   L +   G    S+ E
Sbjct: 11  GTPLYVYDFDQIKSQFLQLKEAFAGRKSLIAYAIKANSNLSVIQHLGKLESGADCVSIGE 70

Query: 63  VMLGH-EKFGGETHAYNV-AYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIG 119
           V              ++    +D EI   LS     I   + ++L + +  A+ L K   
Sbjct: 71  VKRALKAGIPPYKIIFSGVGKRDEEILEALSLEILMINVESEAELLRVESLAKSLGKVAR 130

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           +  R+NP +              ++ G   +           SE  +  G+ FH   +  
Sbjct: 131 ISIRVNPDIDPKTHPYISTGLSENKFGVDIESAKRLYILCAKSESLHPVGIHFHIGSQLT 190

Query: 171 SFLCFSAMLKNIEKEFGHFI---TQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                    K +       +    +I++  +GGG+    KD     + D+ Q +      
Sbjct: 191 ELEPLLESAKKVADLTRSLLALKIEIKFFDVGGGLGIRYKDETPINLYDYAQGILAALHG 250

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             V I  EPG  IV N     T VL       K  VIVD ++   +   L         P
Sbjct: 251 LDVTIVCEPGRFIVGNAGCFLTRVLYEKQNEKKRFVIVDGAMNDLLRPSLYKAYHEAFAP 310

Query: 284 NTGPY--TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
             G     A + G  C +GD   +     P++ GD I  +    Y  +  + +N      
Sbjct: 311 KGGESFSEADIVGPVCESGDWLAKGVMLPPLEHGDLIVIKSAGAYGFSMSSQYNSRARAA 370

Query: 342 IAVKNVDGTIKAIREFSYNDYYNN 365
                   +            + N
Sbjct: 371 EVALEGGESRLIRAREEIESLWQN 394


>gi|330999054|ref|ZP_08322778.1| diaminopimelate decarboxylase [Parasutterella excrementihominis YIT
           11859]
 gi|329575641|gb|EGG57172.1| diaminopimelate decarboxylase [Parasutterella excrementihominis YIT
           11859]
          Length = 437

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 55/388 (14%), Positives = 116/388 (29%), Gaps = 27/388 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  KQ ++N   +     +     +  A+K  +   +   L +   G    S  E
Sbjct: 33  GTPLYVYSKQAIVNAFQSYQKPLEPYKHLMCFAVKANSNLSIIRLLGKLGAGFDIVSEGE 92

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++   K         + D       + ++L++    AQK  KK  
Sbjct: 93  LRRIQAAGCDTSKVIFSGVAKTYHEIEAALDADIKCFNIESPAELDRVIAVAQKKGKKAR 152

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170
              R+NP V              ++ G      +        S    V G+  H   +  
Sbjct: 153 VSFRVNPDVDAKTHPYISTGLKKNKFGIAYDQAVELYLKASRSPELEVVGIDCHIGSQIT 212

Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSE 223
               F    + +             ++ I  GGG+     +     P        +   +
Sbjct: 213 DTAPFVDACEKLCTLLDKLRLNGIDLQHIDFGGGLGIQYSNEAVPSPTVLVAALRRVLVK 272

Query: 224 KYS--VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS-VEAHVPDYLLYQESAT 280
           +     ++  E G ++V N+  L  TV  + +       +    +   +   L       
Sbjct: 273 RGYGDKEMIFEAGRSLVGNSGALLMTVQYMKQGELKNFCIVDCGMNDMIRPTLYQAWMQI 332

Query: 281 IYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
           +              V G  C  GD  G+      V+ GD ++      Y ++  + +N 
Sbjct: 333 VPVTPKKEEKETYCYVVGPVCETGDWLGKDRLL-NVQEGDLMALLSAGAYGMSMASNYNS 391

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +P   + + +      +     + ++
Sbjct: 392 RCLPAEVLVDGNRAALIRKRQCAEELFS 419


>gi|227823226|ref|YP_002827198.1| diaminopimelate decarboxylase [Sinorhizobium fredii NGR234]
 gi|227342227|gb|ACP26445.1| diaminopimelate decarboxylase [Sinorhizobium fredii NGR234]
          Length = 422

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 61/389 (15%), Positives = 110/389 (28%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +         +    +  A+K  +   +  TL +   G    S  
Sbjct: 25  VGTPFYCYSTATLERHYRVFAQAFADVDAMVCYAMKANSNQAVLKTLGRLGAGIDVVSEG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E+          E   ++   K        + +        +  +L     +A +     
Sbjct: 85  ELRRALAAGIPAERIMFSGVGKTPREMDLGLEAGIYCFNVESEPELEILNQRAVRAGKQA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            +  RINP V           +  ++ G   +                V G+  H   + 
Sbjct: 145 HVSFRINPDVDARTHAKISTGKKENKFGISWERARAVYAHAATLPGIKVTGIDMHIGSQI 204

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221
                F    K +             I+ + +GGG+    ++          +   +K  
Sbjct: 205 TELQPFDDAFKLLRELVDTLRSDGHAIDHVDIGGGLGIPYREDNNPPPLPDAYADIVKNQ 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
            +    +I  EPG  IV N   L T V+ + +   K  VIVD ++   +   L       
Sbjct: 265 LKGLDCKIVTEPGRLIVGNAGILVTEVIYVKDGGEKTFVIVDGAMNDLIRPTLYEAYHEI 324

Query: 281 I-----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                   N     A V G  C  GD           K GD  +      Y   +   +N
Sbjct: 325 RPVKISAANAPRIKADVVGPVCETGDYLALDREMAMPKPGDLFAIGSAGAYGAVQAGTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    +   D          Y+   +
Sbjct: 385 SRLLVPEVLVKGDRFHVIRPRKDYDALID 413


>gi|293390767|ref|ZP_06635101.1| diaminopimelate decarboxylase [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290951301|gb|EFE01420.1| diaminopimelate decarboxylase [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 416

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 61/384 (15%), Positives = 114/384 (29%), Gaps = 25/384 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  K  L  +         N    +  A+K      + + + +   G    S  E
Sbjct: 26  GTPLYVYSKAALERHWYAFENAFGNHPHLVCFAVKSNPNIAILNIMARLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +              ++   K     A             + ++L +    A        
Sbjct: 86  LERVLAAGGEAHKVVFSGVAKSRREIARALEVGIRCFNVESEAELLRINQVAGDIGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G   +   E            + G+  H   +  
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVEQAREVYKLATTLPNIEIVGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F      +     +      Q++ + LGGG+  T       +P +      ++ S 
Sbjct: 206 ELQPFLDAADRLIMLMEQLKQDSIQLKHLDLGGGLGVTYTDETPPHPTEYAKALWEKLSA 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
              ++I +EPG AI  N   L T V  +     +N  IVD+ +   +   L       + 
Sbjct: 266 FNELEIIVEPGRAITANAGILVTKVEYLKSNESRNFAIVDAGMNDMIRPALYQAYMNILE 325

Query: 283 PNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +           V G  C   D  G+      +  GD ++      Y  +  + +N   
Sbjct: 326 IDRTLAREEKIYDVVGPICETSDFLGKQRKLA-IAEGDYLAQRSAGAYGASMSSNYNSRP 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362
                + + D      R  + N+ 
Sbjct: 385 RTAEVMVDGDNAYLIRRREALNEL 408


>gi|222087349|ref|YP_002545886.1| diaminopimelate decarboxylase protein [Agrobacterium radiobacter
           K84]
 gi|221724797|gb|ACM27953.1| diaminopimelate decarboxylase protein [Agrobacterium radiobacter
           K84]
          Length = 423

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 61/388 (15%), Positives = 119/388 (30%), Gaps = 26/388 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+     L  +         +    +  A+K  +   +  TL +   G    S+ 
Sbjct: 25  VGTPFYVYSTATLERHYRVFSEAFSDVDAMVCYAMKANSNQAVLKTLGRLGAGVDVVSVG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116
           E+              ++   K       A+ +        +  +L     +A +  K  
Sbjct: 85  ELQRALAAGIPANRIMFSGVGKTAQEMDVALEAGIYCFNVESEPELEVLNQRAVRAGKIA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK--IESEIKNV-----NGLMFHNNCEN 169
            +  RINP V           +  ++ G   +    + +   N+      G+  H   + 
Sbjct: 145 PVSFRINPDVDARTHAKISTGKKENKFGISWERARTVYARAANLPGIDATGIDMHIGSQI 204

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221
                F    K +    +        I  + +GGG+    +D          +   +K+ 
Sbjct: 205 TELQPFEDAFKLLRELVETLRGDGHDIHHVDIGGGLGIPYRDDNTPPPLPDAYAHIVKDQ 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
               + +I  EPG  IV N   L T V+ + +   K+ VIVD+++   +   L       
Sbjct: 265 LRGLNCKIVTEPGRLIVGNAGILVTEVIYVKDGGNKSFVIVDAAMNDLIRPTLYEAYHEI 324

Query: 281 I-----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                   N     A + G  C  GD           K GD ++      Y   +   +N
Sbjct: 325 RPVEITAANAPRIKADIVGPVCETGDYLALDREMAMPKPGDLLAVSSGGAYGAVQAGTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY 363
              +    +             +Y +  
Sbjct: 385 SRLLVPEVLVKGSDFHVIRARRTYEELI 412


>gi|148381278|ref|YP_001255819.1| diaminopimelate decarboxilase [Clostridium botulinum A str. ATCC
           3502]
 gi|153934190|ref|YP_001385655.1| diaminopimelate decarboxilase [Clostridium botulinum A str. ATCC
           19397]
 gi|153936837|ref|YP_001389061.1| diaminopimelate decarboxilase [Clostridium botulinum A str. Hall]
 gi|148290762|emb|CAL84893.1| diaminopimelate decarboxylase [Clostridium botulinum A str. ATCC
           3502]
 gi|152930234|gb|ABS35734.1| diaminopimelate decarboxilase [Clostridium botulinum A str. ATCC
           19397]
 gi|152932751|gb|ABS38250.1| diaminopimelate decarboxilase [Clostridium botulinum A str. Hall]
          Length = 428

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 72/398 (18%), Positives = 130/398 (32%), Gaps = 35/398 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP Y++D+  + +N    +        K+  A K F    M + + +        S  E
Sbjct: 29  KTPLYVMDETLIRDNCRRYVTSFDKEKNKVAYAGKAFLTKAMCNLIKEEGLSLDVVSGGE 88

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSN--CDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +       F  +   ++   K  E   +  N    T + +   +L+K  +  +  + K  
Sbjct: 89  IFTAYRSGFPMDKVYFHGNNKTIEEIEMAINLGVGTFVADNFQELDKINNICKNKNIKQR 148

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168
             LRI P +           +  S+ G    D           E E     G   H   +
Sbjct: 149 VILRIIPGIEAHTHEYIRTGQIDSKFGFTLIDDGAIKAVKKASELENIQFVGFHCHIGSQ 208

Query: 169 NK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                        ML+ I++        IE + LGGG     K+       +   +    
Sbjct: 209 IFETKPYEEEIEIMLRLIKRTNEELNIDIEELDLGGGFGIYYKEGDEPKKIEEFCKIILD 268

Query: 225 YSVQI-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271
            +               +EPG +IV N+     +V  I E       +  +  +  ++  
Sbjct: 269 KTKSYSKEIGVKEPILVIEPGRSIVGNSGVTLYSVGSIKEIPNIAKYIAVNGGMTDNIRP 328

Query: 272 YLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
            L   E   +  N           V G+ C +GDI  +      V+  D ++  +   Y 
Sbjct: 329 ALYKSEYECVVCNKALDNLLEEVKVVGKCCESGDILIDNVKLPIVETDDLLAILNTGAYG 388

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            +  + +N   +P++   N D T    R  SY +   N
Sbjct: 389 YSMASNYNKALLPSVVFVNNDKTKLVCRRQSYENLIQN 426


>gi|302879299|ref|YP_003847863.1| diaminopimelate decarboxylase [Gallionella capsiferriformans ES-2]
 gi|302582088|gb|ADL56099.1| diaminopimelate decarboxylase [Gallionella capsiferriformans ES-2]
          Length = 417

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 57/384 (14%), Positives = 117/384 (30%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP Y+  +  L           +     +  A+K  A   + +   +   G    S  E
Sbjct: 29  ETPCYVYSRAALTEGFREFSDALQGREHLICYAVKANANLAILNVFARLGAGFDIVSGGE 88

Query: 63  VMLGH-EKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++   K       A+ +        + ++L++  + A  + K   
Sbjct: 89  LQRVLAAGGDARKVVFSGVGKTRAEMRLALDAGILCFNVESAAELDRLNEVAGSMGKIAA 148

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
             LR+NP V              ++ G    + +    K        + G+  H   +  
Sbjct: 149 ISLRVNPDVDAKTHPYISTGLKQNKFGVAYTEAVALYRKASGLKNLRITGMDCHIGSQLT 208

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK---EFSEK 224
               F A ++    +  E       +E + LGGG+     D       + +       + 
Sbjct: 209 ETSPFIAAIEKILLLVDELASEGIALEHLDLGGGLGICYDDETPPAIGEYIAALLGALQG 268

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES---AT 280
            + ++ LEPG  +V N   L T V  I     KN  IVD+++   +   L          
Sbjct: 269 RTQKLILEPGRVLVGNAGVLLTRVEYIKPGEEKNFAIVDAAMNDLMRPALYDAYHGILPV 328

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
           +       +  V G  C  GD  G       +     ++      Y ++  + +N     
Sbjct: 329 VREAHAVQSYEVVGPICETGDFIGHARELA-IAPHSLLAVMSAGAYGMSMSSNYNTRPRA 387

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + +           +    ++
Sbjct: 388 AEVMVDGTAVHLVRERETVPQLFS 411


>gi|322807653|emb|CBZ05228.1| diaminopimelate decarboxylase [Clostridium botulinum H04402 065]
          Length = 428

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 72/398 (18%), Positives = 130/398 (32%), Gaps = 35/398 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP Y++D+  + +N    +        K+  A K F    M + + +        S  E
Sbjct: 29  KTPLYVMDETLIRDNCRRYITSFDKEKNKVAYAGKAFLTKAMCNLIKEEGLSLDVVSGGE 88

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSN--CDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +       F  +   ++   K  E   +  N    T + +   +L+K  +  +  + K  
Sbjct: 89  IFTAYRSGFPMDKVYFHGNNKTIEEIEMAINLGVGTFVADNFQELDKINNICKNKNIKQR 148

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168
             LRI P +           +  S+ G    D           E E     G   H   +
Sbjct: 149 VILRIIPGIEAHTHEYIRTGQIDSKFGFTLIDDGAIKAVKKASELENIQFVGFHCHIGSQ 208

Query: 169 NK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                        ML+ I++        IE + LGGG     K+       +   +    
Sbjct: 209 IFETKPYEEEIEIMLRLIKRTNEELNIDIEELDLGGGFGIYYKEGDEPKKIEEFCKIILD 268

Query: 225 YSVQI-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271
            +               +EPG +IV N+     +V  I E       +  +  +  ++  
Sbjct: 269 KTKSYSKEIGVKEPILVIEPGRSIVGNSGVTLYSVGSIKEIPNIAKYIAVNGGMTDNIRP 328

Query: 272 YLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
            L   E   +  N           V G+ C +GDI  +      V+  D ++  +   Y 
Sbjct: 329 ALYKSEYECVVCNKALDNLLEEVKVVGKCCESGDILIDNVKLPIVETDDLLAILNTGAYG 388

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            +  + +N   +P++   N D T    R  SY +   N
Sbjct: 389 YSMASNYNKALLPSVVFVNNDKTKLVCRRQSYENLIQN 426


>gi|194016686|ref|ZP_03055299.1| diaminopimelate decarboxylase [Bacillus pumilus ATCC 7061]
 gi|194011292|gb|EDW20861.1| diaminopimelate decarboxylase [Bacillus pumilus ATCC 7061]
          Length = 441

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 66/399 (16%), Positives = 127/399 (31%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   +     +       +    ++  A K F++  MF    +        S 
Sbjct: 30  GTPLYVYDVALIRERAKSFQKAFIEEELKAQVAYASKAFSSIAMFQLAKEEGLSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E   ++     +D    A+      I+ +   ++   ++  Q+L K+
Sbjct: 90  GELHTAICAGFPVEKIHFHGNNKSRDELKMALEHEIGCIVVDNFYEMKLIEELGQELSKQ 149

Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           +   LRI P V           +  S+ G         E  K  + SE+  + G+  H  
Sbjct: 150 VKVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQADEAVKQVLGSEVIELLGVHCHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWI----SLGGGIHFTDKDYPVKDFC------- 215
            +      F      I  +   +     +I    +LGGG      +              
Sbjct: 210 SQIFDTAGFVLAADKIFLKLDEWRESFGFISTVLNLGGGFGIRYTEEDEPLPATEYVEKI 269

Query: 216 -QRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            Q +KE   +Y   +   ++EPG ++V +  T   T+            V     +  ++
Sbjct: 270 IQAVKENVTRYEFDMPEIWIEPGRSLVGDAGTTLYTIGSSKHVPGIRDYVAVDGGMSDNI 329

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +     A     +   T  + G+ C +GD+         +  GD ++      
Sbjct: 330 RPALYQAKYEAASANKMSQSHNQTVSIAGKCCESGDMLIWDIDLPELSQGDLLAVFCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  N +N I  P +           +   +Y D   
Sbjct: 390 YGYSMSNNYNRIPRPAVVFVEDGEAQLVVERETYADIVK 428


>gi|307322647|ref|ZP_07601981.1| diaminopimelate decarboxylase [Sinorhizobium meliloti AK83]
 gi|306891709|gb|EFN22561.1| diaminopimelate decarboxylase [Sinorhizobium meliloti AK83]
          Length = 447

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 62/384 (16%), Positives = 125/384 (32%), Gaps = 23/384 (5%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+Y      + N         K     +  A+K  +   +   L     G    S  E+
Sbjct: 44  TPFYCYSASTIRNAFTLLADKLKPVNALVCFAVKANSNISILKLLADLGCGMDIVSGGEL 103

Query: 64  MLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--KI 118
               E         ++   K       A+      +   + ++L   ++ A+ L     +
Sbjct: 104 ERALEAGVAPSKIVFSGVGKTRREIRRALEVGIHQLNVESPAELESIREVARDLGCRAPV 163

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENKS 171
             R+NP V           +   + G   +               +V GL  H   +  +
Sbjct: 164 VFRVNPDVDAHTHAKISTGKKGDKFGINIELIKELYAKAAACPELDVAGLAVHIGSQLLN 223

Query: 172 FLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKD---YPVKDFCQRLKEFSEKY 225
              + A  + +     +       +  + LGGG+           V ++   ++E     
Sbjct: 224 LSPYRAAYRRLASLVDQLRTLDLPVRRLDLGGGLGINYDFGVGPDVGEYAAIVEETVGGL 283

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL-VIVDSSVEAHVPDYLLYQESA----T 280
             ++ +EPG  +V     L T VL++ E    +  IVD+++   +   L           
Sbjct: 284 HCELTVEPGRWLVGPAGLLVTEVLNLKEAGGTVLAIVDAAMNDLMRPALYDAVHPVLPLQ 343

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              N   +   + G  C + D+FG +    P++ G RI+F     Y  +  + +N  ++ 
Sbjct: 344 NLGNCSAHPYQIVGPVCESSDVFGTYDALPPLQSGVRIAFGCAGAYGASMASTYNSRDLI 403

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + + D      R  +  D   
Sbjct: 404 AEVLVDADRFRLIRRRQTIQDLLE 427


>gi|315178745|gb|ADT85659.1| diaminopimelate decarboxylase [Vibrio furnissii NCTC 11218]
          Length = 417

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 57/378 (15%), Positives = 113/378 (29%), Gaps = 24/378 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  +  G+ +TL +   G    S  E
Sbjct: 27  GTPLYVYSRATLERHWHAFDKSVGDHPHLVCYAVKANSNLGVLNTLARLGSGFDIVSAGE 86

Query: 63  V-MLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +  +           ++   K       A+          + S+L +    A    +   
Sbjct: 87  LERVVAAGGDPAKVVFSGVGKTAAEMKRALALKIKCFNVESESELERLNQVAGEMGVKAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LRINP V              ++ G       +           +++G+  H   +  
Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAPDVYRLAQRLDHISIHGIDCHIGSQLT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
           +   F         +          I+ + +GGG+           P +     L   + 
Sbjct: 207 AIEPFIDATDRLLALIDNLKAEGIHIKHLDVGGGLGVVYRDELPPQPSEYAKALLSRLAN 266

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279
              +++  EPG AI  N   L T V  +         I+D+++   +   L         
Sbjct: 267 HQELELIFEPGRAIAANAGVLLTRVEYLKHTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                    T  + G  C  GD  G+      ++ GD ++      Y     + +N    
Sbjct: 327 VSPREGAALTYDLVGPVCETGDFLGKDRSLV-LQQGDLLAVRSAGAYGFAMSSNYNTRTR 385

Query: 340 PTIAVKNVDGTIKAIREF 357
               + + + T    +  
Sbjct: 386 AAEVIVDGETTHVVRQRE 403


>gi|116254060|ref|YP_769898.1| diaminopimelate decarboxylase [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115258708|emb|CAK09813.1| putative diaminopimelate decarboxylase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 422

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 62/389 (15%), Positives = 108/389 (27%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+     L  +         +    +  A+K  +   +  TL +   G    S  
Sbjct: 25  VGTPFYVYSTATLERHYRVFSEAFADMDSMVCYAMKANSNQAVLKTLGRLGAGIDVVSEG 84

Query: 62  EVMLGHEK-FGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E+              ++           A+ +        +  +L     +A       
Sbjct: 85  ELRRALAADIPANRIMFSGVGKTPSEMDFALEAGIYCFNVESEPELEILNQRAVSAGKKA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
            +  RINP V           +  ++ G   +                V G+  H   + 
Sbjct: 145 PVSFRINPDVDAKTHSKISTGKKENKFGISWERARAIYAHAARLPGIEVTGIDMHIGSQI 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221
                F    K +             I  + +GGG+    KD          +   +K  
Sbjct: 205 TELQPFDDAFKLLHDLVATLRADGHTIHHVDIGGGLGIPYKDDNNPPPLPDAYAAIVKNQ 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                 +I  EPG  IV N   L T VL + +   K  VIVD ++   +   L       
Sbjct: 265 LRGLDCKIITEPGRLIVGNAGILVTEVLYVKDGGEKTFVIVDGAMNDLIRPTLYEAYHEI 324

Query: 281 I-----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                   N     A V G  C  GD           K GD ++      Y   +   +N
Sbjct: 325 RPVTISAANAPRIRADVVGPVCETGDYLALDREMAMPKPGDLMAVSTAGAYGAVQAGTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    +             +Y +  +
Sbjct: 385 SRLLVPEVLVRGSDFHTIRPRRTYAELIS 413


>gi|182701657|ref|ZP_02613665.2| diaminopimelate decarboxilase [Clostridium botulinum NCTC 2916]
 gi|226950770|ref|YP_002805861.1| diaminopimelate decarboxilase [Clostridium botulinum A2 str. Kyoto]
 gi|182670179|gb|EDT82155.1| diaminopimelate decarboxilase [Clostridium botulinum NCTC 2916]
 gi|226843877|gb|ACO86543.1| diaminopimelate decarboxilase [Clostridium botulinum A2 str. Kyoto]
          Length = 422

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 72/398 (18%), Positives = 130/398 (32%), Gaps = 35/398 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP Y++D+  + +N    +        K+  A K F    M + + +        S  E
Sbjct: 23  KTPLYVMDETLIRDNCRRYITSFDKEKNKVAYAGKAFLTKAMCNLIKEEGLSLDVVSGGE 82

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSN--CDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +       F  +   ++   K  E   +  N    T + +   +L+K  +  +  + K  
Sbjct: 83  IFTAYRSGFPMDKVYFHGNNKTIEEIEMAINLGVGTFVADNFQELDKINNICKNKNIKQR 142

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168
             LRI P +           +  S+ G    D           E E     G   H   +
Sbjct: 143 VILRIIPGIEAHTHEYIRTGQIDSKFGFTLIDDGAIKAVKKASELENIQFVGFHCHIGSQ 202

Query: 169 NK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                        ML+ I++        IE + LGGG     K+       +   +    
Sbjct: 203 IFETKPYEEEIEIMLRLIKRTNEELNIDIEELDLGGGFGIYYKEGDEPKKIEEFCKIILD 262

Query: 225 YSVQI-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271
            +               +EPG +IV N+     +V  I E       +  +  +  ++  
Sbjct: 263 KTKSYSKEIGVKEPILVIEPGRSIVGNSGVTLYSVGSIKEIPNIAKYIAVNGGMTDNIRP 322

Query: 272 YLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
            L   E   +  N           V G+ C +GDI  +      V+  D ++  +   Y 
Sbjct: 323 ALYKSEYECVVCNKALDNLLEEVKVVGKCCESGDILIDNVKLPIVETDDLLAILNTGAYG 382

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            +  + +N   +P++   N D T    R  SY +   N
Sbjct: 383 YSMASNYNKALLPSVVFVNNDKTKLVCRRQSYENLIQN 420


>gi|315497547|ref|YP_004086351.1| diaminopimelate decarboxylase [Asticcacaulis excentricus CB 48]
 gi|315415559|gb|ADU12200.1| diaminopimelate decarboxylase [Asticcacaulis excentricus CB 48]
          Length = 438

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 66/399 (16%), Positives = 113/399 (28%), Gaps = 35/399 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIR---------KNAGVKLLLALKCFAAWGMFDTLNQYM 52
           + TP Y+        +                 KN    +  A K  +   +  TL +  
Sbjct: 25  VGTPLYVYSSATFERHFQVFSQALWAQDALQSPKNEAPLIAYATKANSNLAVLQTLAEQG 84

Query: 53  DGTTSSSLYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKD 109
            G  + S  E+          E   ++   K  E  A         +   +  +L +   
Sbjct: 85  AGADTVSEGEIRKALTAGIPPERIVFSGVGKTDEEMAFALKTGIYQLNVESKPELERLSH 144

Query: 110 KAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-----SEIKNV--NG 160
            A  L     I +RINP V               + G   ++ I      +   N+   G
Sbjct: 145 VAASLGLVAPIVIRINPGVGAGGHAKITTGGAKDKFGVSAREAIALYGQAAADPNIAPMG 204

Query: 161 LMFHNNCENKSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTD----KDYPVKD 213
           +  H   +        A    +             +E + LGGG+        +    +D
Sbjct: 205 IACHIGSQITDLAPMQAAFSKMRGWVQELRAGGLSVERLDLGGGLGVPYFNMSEPPSPED 264

Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV---DSSVEAHVP 270
           F Q +        V+   EPG  I  N   L + V+ I E   +       D+++   + 
Sbjct: 265 FAQMVALTVGNLGVRYTFEPGRLIAANAGILVSRVIHIHEREDSGQKFLVVDAAMNDLIR 324

Query: 271 DYLLYQESATI----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
             +                   T  V G  C  GD F        +K GD ++F     Y
Sbjct: 325 PAMYDAYHDIRPVVAVQTNETATYDVVGPVCETGDTFTRGRDLPALKAGDLVAFMSAGAY 384

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
                + +N   +    +             SY +  N 
Sbjct: 385 GAVMGSEYNSRPLAPEVLVRDTDWAVVRPRPSYEEMMNR 423


>gi|168182039|ref|ZP_02616703.1| diaminopimelate decarboxylase [Clostridium botulinum Bf]
 gi|237796776|ref|YP_002864328.1| diaminopimelate decarboxilase [Clostridium botulinum Ba4 str. 657]
 gi|182674869|gb|EDT86830.1| diaminopimelate decarboxylase [Clostridium botulinum Bf]
 gi|229260999|gb|ACQ52032.1| diaminopimelate decarboxilase [Clostridium botulinum Ba4 str. 657]
          Length = 428

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 73/398 (18%), Positives = 130/398 (32%), Gaps = 35/398 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP Y++D+  + +N    +        K+  A K F    M + + +        S  E
Sbjct: 29  KTPLYVMDETLIRDNCRRYVTSFNKEKNKVAYAGKAFLTKAMCNLIKEEGLSLDVVSGGE 88

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSN--CDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +       F  +   ++   K  E   +  N    T + +   +L+K  +  +  + K  
Sbjct: 89  IFTAYRSGFPMDKVYFHGNNKTMEEIEMAINLGVGTFVADNFQELDKINNICKNKNIKQR 148

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168
             LRI P +           +  S+ G    D           E E     G   H   +
Sbjct: 149 VILRIIPGIEAHTHEYIRTGQIDSKFGFTLIDDGAIKAVKKAYELENIQFVGFHCHIGSQ 208

Query: 169 NK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                        MLK I++        IE + LGGG     K+       +   +    
Sbjct: 209 IFETKPYEEEIEIMLKLIKRTNEELNIDIEELDLGGGFGIYYKEGDEPKKIEEFCKIILD 268

Query: 225 YSVQI-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271
            +               +EPG +IV N+     +V  I E       +  +  +  ++  
Sbjct: 269 KARSYSKEIGVKEPILVIEPGRSIVGNSGVTLYSVGSIKEIPNVAKYIAVNGGMTDNIRP 328

Query: 272 YLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
            L   E   +  N           V G+ C +GDI  +      V+  D ++  +   Y 
Sbjct: 329 ALYKSEYECVVCNKALDNLLEEVKVVGKCCESGDILIDNVKLPIVETDDLLAILNTGAYG 388

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            +  + +N   +P++   N D T    R  SY +   N
Sbjct: 389 YSMASNYNKALLPSVVFVNNDKTKLVCRRQSYENLIQN 426


>gi|170724853|ref|YP_001758879.1| diaminopimelate decarboxylase [Shewanella woodyi ATCC 51908]
 gi|169810200|gb|ACA84784.1| diaminopimelate decarboxylase [Shewanella woodyi ATCC 51908]
          Length = 414

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 62/382 (16%), Positives = 116/382 (30%), Gaps = 23/382 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         N    +  A+K  +   + + L +   G    S  E
Sbjct: 26  GTPLYIYSRATLERHWHAFDSAVANHPHLICYAVKANSNIAVLNVLARLGSGFDIVSGGE 85

Query: 63  V-MLGHEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +  +       +   ++   K  +    A+          + ++L +    A KL K   
Sbjct: 86  LSRVIEAGGDPKKVVFSGVGKTVEEMEMALNLGIHCFNVESAAELEQLNLVALKLGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNC--- 167
           + LR+NP V              ++ G    D               V G+  H      
Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIAMDDAEAIFARAHALPGLQVKGVDCHIGSQLT 205

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
           E K FL     +  +          IE   +GGG+  T  D        +   L E    
Sbjct: 206 EIKPFLDAMDRILALIDRLAEQDIIIEHFDVGGGLGVTYDDETPPQPDVYASALVERLGD 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQE---SAT 280
             +++  EPG AI  N     T VL +   + K+  +VD ++   +   L          
Sbjct: 266 RKLKLIFEPGRAIAANAGIFVTQVLYLKGNSDKHFALVDGAMNDLIRPSLYSAWQKIIPV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
           +          + G  C  GD  G+      ++  D ++      Y     + +N     
Sbjct: 326 VPREGESRNYDIVGPVCETGDFLGKERELC-LEPQDYLAVRSSGAYGFTMSSNYNSRPRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDY 362
              + + +      +    +  
Sbjct: 385 AEVMVDGEQAHLIRQREKLSQL 406


>gi|153939469|ref|YP_001392682.1| diaminopimelate decarboxilase [Clostridium botulinum F str.
           Langeland]
 gi|170755777|ref|YP_001782960.1| diaminopimelate decarboxilase [Clostridium botulinum B1 str. Okra]
 gi|152935365|gb|ABS40863.1| diaminopimelate decarboxilase [Clostridium botulinum F str.
           Langeland]
 gi|169120989|gb|ACA44825.1| diaminopimelate decarboxilase [Clostridium botulinum B1 str. Okra]
 gi|295320664|gb|ADG01042.1| diaminopimelate decarboxilase [Clostridium botulinum F str. 230613]
          Length = 428

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 72/398 (18%), Positives = 130/398 (32%), Gaps = 35/398 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP Y++D+  + +N    +        K+  A K F    M + + +        S  E
Sbjct: 29  KTPLYVMDETLIRDNCRRYVTSFNKEKNKVAYAGKAFLTKAMCNLIKEEGLSLDVVSGGE 88

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSN--CDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +       F  +   ++   K  E   +  N    T + +   +L+K  +  +  + K  
Sbjct: 89  IFTAYRSGFPMDKVYFHGNNKTIEEIEMAINLGVGTFVADNFQELDKINNICKNKNIKQR 148

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168
             LRI P +           +  S+ G    D           E E     G   H   +
Sbjct: 149 VILRIIPGIEAHTHEYIRTGQIDSKFGFTLIDDGAIKAVKKASELENIQFVGFHCHIGSQ 208

Query: 169 NK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                        ML+ I++        IE + LGGG     K+       +   +    
Sbjct: 209 IFETKPYEEEIEIMLRLIKRTNEELNIDIEELDLGGGFGIYYKEGDEPKKIEEFCKIILD 268

Query: 225 YSVQI-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271
            +               +EPG +IV N+     +V  I E       +  +  +  ++  
Sbjct: 269 KTKSYSKEIGVKEPILVIEPGRSIVGNSGVTLYSVGSIKEIPNIAKYIAVNGGMTDNIRP 328

Query: 272 YLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
            L   E   +  N           V G+ C +GDI  +      V+  D ++  +   Y 
Sbjct: 329 ALYKSEYECVVCNKALDNLLEEVKVVGKCCESGDILIDNVKLPIVETDDLLAILNTGAYG 388

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            +  + +N   +P++   N D T    R  SY +   N
Sbjct: 389 YSMASNYNKALLPSVVFVNNDKTKLVCRRQSYENLIQN 426


>gi|121593140|ref|YP_985036.1| diaminopimelate decarboxylase [Acidovorax sp. JS42]
 gi|120605220|gb|ABM40960.1| diaminopimelate decarboxylase [Acidovorax sp. JS42]
          Length = 431

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 56/389 (14%), Positives = 114/389 (29%), Gaps = 28/389 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+     +L+ L           V++  A+K  ++  +     ++  G    S  E
Sbjct: 34  GTPLYVYSHAAMLDALGAYQRGFAGRKVQICYAMKANSSLAVLQLFARHGCGFDIVSAGE 93

Query: 63  VML--GHEKFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +           +     V   +     A+          + ++L+   + AQ +     
Sbjct: 94  LQRVIAAGGDPAKVIFSGVGKTRAEMRQALEVGIGCFNVESEAELDVLSEVAQSMGLRAP 153

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENK 170
           I +R+NP+V              ++ G   +                V G+  H   +  
Sbjct: 154 ISIRVNPNVDAKTHPYISTGLKGNKFGIAHERTVATYQRAAALPGLRVVGIDCHIGSQIT 213

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               +   +  +    +        +  I  GGG+                 +   K   
Sbjct: 214 EESPYLDAMDRMLDLVQAIEAAGIAVHHIDFGGGLGIDYNGDTPPRADALWAKLLAKLDA 273

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280
                 Q+ +EPG ++V N     T VL +    +    + D+++       +     A 
Sbjct: 274 RGYGDRQLMIEPGRSLVGNAGVCLTEVLYLKPGEQKNFCIVDAAMNDLPRPAMYQAYHAI 333

Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +           +   V G  C +GD  G       V  GD ++      Y  +  + +N
Sbjct: 334 VPLQATAPTAVSHVYDVVGPICESGDWIGRDRNLA-VAAGDMLAVLSAGAYCSSMGSTYN 392

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
               P   + +           S ND + 
Sbjct: 393 TRPRPAEVLVDGARAHLIRTRESVNDIFR 421


>gi|91786679|ref|YP_547631.1| diaminopimelate decarboxylase [Polaromonas sp. JS666]
 gi|91695904|gb|ABE42733.1| diaminopimelate decarboxylase [Polaromonas sp. JS666]
          Length = 427

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 61/385 (15%), Positives = 120/385 (31%), Gaps = 27/385 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++  K  +L+ L           V++  A+K  ++ G+         G    S  E
Sbjct: 34  GTPLFVYSKAAMLSALAAYQRGFAGRDVQICYAMKANSSLGVLQVFAGAGCGFDIVSGGE 93

Query: 63  VMLGHEKFG-GETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKK 117
           +       G      ++   K       A+ +        + ++L+       A  L   
Sbjct: 94  LERVLAAGGQANKIIFSGVGKTRAEMRQALAAGIGCFNVESEAELDVLSGVAAAMNLRAP 153

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + +R+NP+V              ++ G   +D +             V G+  H   +  
Sbjct: 154 VSIRVNPNVDPKTHPYISTGLKGNKFGVAHEDALRIYQHAAALPGLQVAGIDCHIGSQIT 213

Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS- 226
               +   +  +            ++E I  GGG+          +     ++   K   
Sbjct: 214 ETTPYLDAMDRVLDLVASIESAGIELEHIDFGGGLGINYNGDTPPEADVLWRQLLAKLDA 273

Query: 227 -----VQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                 ++ +EPG ++V N     T VL +     KN  I+D+++       +     A 
Sbjct: 274 RGYGSKKLMIEPGRSLVGNAGICLTEVLYLKPGEQKNFCIIDAAMNDLPRPAMYQAFHAI 333

Query: 281 IYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
           +    G      T  V G  C +GD  G       V  GD ++      Y ++  + +N 
Sbjct: 334 VPAVAGGPAPATTYDVVGPVCESGDWIGRDRPLA-VNAGDVLAVLSAGAYCMSMASNYNT 392

Query: 337 INMPTIAVKNVDGTIKAIREFSYND 361
                  + +        R     D
Sbjct: 393 RGRAAEVLVDGSQAHLIRRREDAQD 417


>gi|145588275|ref|YP_001154872.1| diaminopimelate decarboxylase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145046681|gb|ABP33308.1| diaminopimelate decarboxylase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 432

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 61/391 (15%), Positives = 121/391 (30%), Gaps = 30/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYI----RKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
            TP Y+  K  L              +     ++  A+K  +   + +   +   G    
Sbjct: 36  GTPLYVYSKSALSKAYQAYDKACVDKQGKRRARIHYAMKANSNLAVINCFKELGAGFDLV 95

Query: 59  SLYEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL- 114
           S  E+          ++  +    K  +  A    +    I   ++++L+K    A +L 
Sbjct: 96  SGGELARALAIGADPKSLVFAGVGKSAKEIAEALKAGVKCINVESIAELHKINRVATELG 155

Query: 115 -HKKIGLRINPSVSYSKFILADPNRPFSRLGE-------KCKDKIESEIKNVNGLMFHNN 166
               I LR+NP V              ++ G          ++  +    +V G+  H  
Sbjct: 156 LRAPISLRVNPDVDAQTHPYISTGLKGNKFGIAYHEVLKTYREASQLAQIDVVGIDCHIG 215

Query: 167 CENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223
            +  +   +   L  +     +       I  + LGGG+  +  D    D          
Sbjct: 216 SQITTTAPYLDALDKVLDLVAQLKKEGIVIHHLDLGGGLGISYSDETPPDITDFTDTLLN 275

Query: 224 KY------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQ 276
           +        + + LEPG ++V N   L TTV  +    +    + D+++   +   L   
Sbjct: 276 RVAERGFGHLDVVLEPGRSLVGNAGVLLTTVEYLKPGAEKNFCIVDAAMTELMRPALYEA 335

Query: 277 ES---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                          T  V G  C +GD  G       V+ GD ++      Y     + 
Sbjct: 336 HHGIVPVQAKQAKALTYDVVGPVCESGDWLGRDRHLA-VEEGDLLAILSAGAYGFVMASN 394

Query: 334 FNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +N    P   + +           + +D + 
Sbjct: 395 YNTRPKPAEIIVDGKNAYVIRARENTSDLFA 425


>gi|261210168|ref|ZP_05924465.1| diaminopimelate decarboxylase [Vibrio sp. RC341]
 gi|260840708|gb|EEX67257.1| diaminopimelate decarboxylase [Vibrio sp. RC341]
          Length = 417

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 58/378 (15%), Positives = 111/378 (29%), Gaps = 24/378 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  +  G+ +TL +   G    S+ E
Sbjct: 27  GTPLYIYSRATLERHWHAFDKSVGDYPHLICYAVKANSNLGVLNTLARLGSGFDIVSVGE 86

Query: 63  VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++   K       A+          +  +L++    A +L     
Sbjct: 87  LERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKIKCFNVESEPELHRLNKVAAELGVKAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LRINP V              ++ G       E           +V+G+  H   +  
Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGITFDRAAEVYRLAHSLPNLDVHGIDCHIGSQLT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
           +   F         +          I  + +GGG+    +D       +  K   ++   
Sbjct: 207 ALAPFIDATDRLLALIDSLKAQGIHIRHLDVGGGLGVVYRDELPPQPSEYAKALLDRLER 266

Query: 228 QI----YLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQE---SA 279
                   EPG AI  N   L T V  +         I+D+++   +   L         
Sbjct: 267 HRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHKNFAIIDAAMNDLIRPALYQAWQDIIP 326

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                    T  + G  C   D  G+      ++ GD ++      Y     + +N    
Sbjct: 327 LRPRQGEAQTYDLVGPVCETSDFLGKDRDLV-LEEGDLLAVRSSGAYGFTMSSNYNTRPR 385

Query: 340 PTIAVKNVDGTIKAIREF 357
               + + + T    +  
Sbjct: 386 VAEVMVDGNKTYLVRQRE 403


>gi|240138367|ref|YP_002962839.1| diaminopimelate decarboxylase [Methylobacterium extorquens AM1]
 gi|240008336|gb|ACS39562.1| diaminopimelate decarboxylase [Methylobacterium extorquens AM1]
          Length = 422

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 60/389 (15%), Positives = 112/389 (28%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +              +  A+K  +   +  TL     G    S  
Sbjct: 25  VGTPFYCYSTATLERHYRVFAEAFAGDDALVCFAMKANSNQAVLATLAHQGAGMDIVSEG 84

Query: 62  EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116
           E+         GE   ++     ++    A+ +N       +  +L    + A  +    
Sbjct: 85  ELRRALAAGVPGERIVFSGVGKTREEMAAALDANILCFNVESEPELAALSEVAVARGRKA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
            + +R+NP V           +  ++ G                    + G+  H   + 
Sbjct: 145 PVSIRVNPDVDALTHAKISTGKSDNKFGIPISRARAVYAGAARLPGLEIVGVDAHIGSQI 204

Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221
                F    + + +          ++  +  GGG+                    L+  
Sbjct: 205 TDLTPFDNAARLLCELARDLLADGHRLHHVDFGGGLGIPYRDDNAPPPDPAALAAILRPH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESAT 280
            +   ++   E G  I  N   L T V+ +   + K  VIVD ++   +   L     A 
Sbjct: 265 FKPLGLRPVFEIGRMIAGNAGVLVTRVIYVKPTDEKTFVIVDGAMNDLIRPTLYEAFHAL 324

Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                        TA V G  C +GD          V  GD I+      Y   +   +N
Sbjct: 325 RPVREPAPDTPRLTADVVGPVCESGDYLALGREMPMVAPGDLIAVMSAGAYGAVQACTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    +   D +       SY+D   
Sbjct: 385 SRRLVPEVLVTGDRSAVVRPRPSYDDLIR 413


>gi|294851220|ref|ZP_06791893.1| diaminopimelate decarboxylase [Brucella sp. NVSL 07-0026]
 gi|294819809|gb|EFG36808.1| diaminopimelate decarboxylase [Brucella sp. NVSL 07-0026]
          Length = 421

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 63/389 (16%), Positives = 118/389 (30%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+  +  +  +         +    +  ALK  +   +   L +   G  + S  
Sbjct: 25  VGTPFYVYSRATIERHFRVFHDAFADMDTLVTYALKANSNQAVLTALAKLGAGADTVSQG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHK 116
           E+              ++   K       A+ +        +  +L     +  A     
Sbjct: 85  EIRRALAAGIPANRIVFSGVGKTPREMDFALEAGIYCFNVESEPELEILSARAVAAGKVA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            + LRINP V           +  ++ G        +  +       NV G+  H   + 
Sbjct: 145 PVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARAAYARAASLPGLNVVGIDMHIGSQI 204

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221
                F      +    KE       I  + +GGG+            P   + Q + + 
Sbjct: 205 IDLEPFDNAFALMAELVKELQADGHNIRHVDVGGGLGIPYRTDNTPPPPPVAYAQIVAKH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278
            +   ++   EPG  IV N   L T V+ + + + KN VIVD+++   +   L       
Sbjct: 265 IKPLGLKTVFEPGRLIVGNAGLLVTEVIFVKKGDAKNFVIVDAAMNDLIRPTLYDAFHDI 324

Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                   N     A   G  C  GD  G          GD I+      Y     + +N
Sbjct: 325 RPVIMPNDNAPRIRADFVGPVCETGDYLGLDREVAKPAPGDLIAICTTGAYGAVLSSTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    + + +         +Y +   
Sbjct: 385 SRLLIPEVLVDGERYHVVRPRRTYEELLA 413


>gi|327483026|gb|AEA77433.1| Diaminopimelate decarboxylase [Vibrio cholerae LMA3894-4]
          Length = 417

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 57/378 (15%), Positives = 110/378 (29%), Gaps = 24/378 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  +  G+ +TL +   G    S+ E
Sbjct: 27  GTPLYVYSRATLERHWHAFDKSVGDYPHLICYAVKANSNLGVLNTLARLGSGFDIVSVGE 86

Query: 63  VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++   K       A+          +  +L +    A +L     
Sbjct: 87  LERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKIKCFNVESEPELLRLNKVAGELGVKAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LRINP V              ++ G       +           +V+G+  H   +  
Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGITFDRAAQVYRLAHSLPNLDVHGIDCHIGSQLT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
           +   F         +          I  + +GGG+    +D       +  K   ++   
Sbjct: 207 ALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGGLGVVYRDELPPQPSEYAKALLDRLER 266

Query: 228 QI----YLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQE---SA 279
                   EPG AI  N   L T V  +         I+D+++   +   L         
Sbjct: 267 HRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHKNFAIIDAAMNDLIRPALYQAWQDIIP 326

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                    T  + G  C   D  G+      ++ GD ++      Y     + +N    
Sbjct: 327 LRPRQGEAQTYDLVGPVCETSDFLGKDRDLV-LQEGDLLAVRSSGAYGFTMSSNYNTRPR 385

Query: 340 PTIAVKNVDGTIKAIREF 357
               + + + T    +  
Sbjct: 386 VAEVMVDGNKTYLVRQRE 403


>gi|289548601|ref|YP_003473589.1| diaminopimelate decarboxylase [Thermocrinis albus DSM 14484]
 gi|289182218|gb|ADC89462.1| diaminopimelate decarboxylase [Thermocrinis albus DSM 14484]
          Length = 416

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 57/381 (14%), Positives = 112/381 (29%), Gaps = 25/381 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+     + + L          G  +  A+K      +   +     G    S  E
Sbjct: 31  GTPLYVYSASYIRDRLREYRESF--PGALICYAVKANFNPHIVSLMAGEGAGADIVSGGE 88

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
           + +            Y    K  +        D       +  +L       ++L KK+ 
Sbjct: 89  LYVALMAGVNPSRIVYAGVGKTVKELVEAIKADILMFNVESRMELEILNQLGEQLGKKVR 148

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCENK 170
           +  R+NP V              S+ G             +  +   V G+  H   +  
Sbjct: 149 ISIRVNPHVDPKTHPYIATGMKKSKFGIDIDRAEEEYRYALSMKNIQVVGVHCHIGSQIL 208

Query: 171 SFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP----VKDFCQRLKEFSE 223
               +      + ++ +       +++++ +GGG+    K         +    L    +
Sbjct: 209 DTSPYVEAVSKVVDLYRSLEDQGIELQYLDIGGGLGIKYKPEDRALTPMELSSALSPILQ 268

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIY 282
           K    + LEPG ++V N   L T V  + +   K+ VIVD+ +   +   +       + 
Sbjct: 269 KVKATVVLEPGRSLVGNAGVLITQVQFVKDKGEKHFVIVDAGMNDLIRPAIYDAYHHILP 328

Query: 283 PNTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       V G  C  GD   +    + V  GD ++      Y     + +N    
Sbjct: 329 VVKRGRPSIVTDVVGPICETGDFLAKDRQLEEVGRGDYLAVLSAGAYGFAMSSHYNVRPR 388

Query: 340 PTIAVKNVDGTIKAIREFSYN 360
               + +            Y 
Sbjct: 389 ACEVLVDRGYVRVIREREDYQ 409


>gi|306843420|ref|ZP_07476021.1| diaminopimelate decarboxylase [Brucella sp. BO1]
 gi|306276111|gb|EFM57811.1| diaminopimelate decarboxylase [Brucella sp. BO1]
          Length = 421

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 63/389 (16%), Positives = 118/389 (30%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+  +  +  +         +    +  ALK  +   +   L +   G  + S  
Sbjct: 25  VGTPFYVYSRATIERHFRVFHDAFADMDTLVTYALKANSNQAVLTALAKLGAGADTVSEG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHK 116
           E+              ++   K       A+ +        +  +L     +  A     
Sbjct: 85  EIRRALAAGIPANRIVFSGVGKTPREMDFALEAGIYCFNVESEPELEILSARAVAAGKVA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            + LRINP V           +  ++ G        +  +       NV G+  H   + 
Sbjct: 145 PVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARAAYARAASLPGLNVVGIDMHIGSQI 204

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221
                F      +    KE       I  + +GGG+            P   + + + + 
Sbjct: 205 IDLEPFDNAFALMAELVKELQADGHNIRHVDVGGGLGIPYRTDNTPPPPPVAYAEIVAKH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278
            +   ++   EPG  IV N   L T V+ + E + KN VIVD+++   +   L       
Sbjct: 265 IKPLGLKTVFEPGRLIVGNAGLLVTEVIFVKEGDAKNFVIVDAAMNDLIRPTLYDAFHDI 324

Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                   N     A   G  C  GD  G          GD I+      Y     + +N
Sbjct: 325 RPVIVPNDNAPRIRADFVGPVCETGDYLGLDREVAKPAPGDLIAICTTGAYGAVLSSTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    + + +         +Y +   
Sbjct: 385 SRLLIPEVLVDGERYHVVRPRRTYEELLA 413


>gi|241206546|ref|YP_002977642.1| diaminopimelate decarboxylase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240860436|gb|ACS58103.1| diaminopimelate decarboxylase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 422

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 62/389 (15%), Positives = 109/389 (28%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+     L  +         +    +  A+K  +   +  TL +   G    S  
Sbjct: 25  VGTPFYVYSTATLERHYRVFSEAFADMDSMVCYAMKANSNQAVLKTLGRLGAGIDVVSEG 84

Query: 62  EVMLGHEK-FGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E+              ++           A+ +        +  +L     +A       
Sbjct: 85  ELRRALAADIPASRIMFSGVGKTPSEMDFALEAGIYCFNVESEPELEILNQRAVSAGKKA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
            +  RINP V           +  ++ G   +                V G+  H   + 
Sbjct: 145 PVSFRINPDVDAKTHSKISTGKKENKFGISWERARAIYAHAAKLPGIEVTGIDMHIGSQI 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221
                F    K +             I  + +GGG+    KD          +   +K  
Sbjct: 205 TELQPFDDAFKLLHDLVATLRADGHTIHHVDIGGGLGIPYKDDNNPPPLPDAYAAIVKNQ 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
               + +I  EPG  IV N   L T VL + +   K  VIVD ++   +   L       
Sbjct: 265 LRGLNCKIITEPGRLIVGNAGILVTEVLYVKDGGEKTFVIVDGAMNDLIRPTLYEAYHEI 324

Query: 281 I-----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                   N     A V G  C  GD           K GD ++      Y   +   +N
Sbjct: 325 RPVTISAANAPRIRADVVGPVCETGDYLALDREMAMPKPGDLMAVSTAGAYGAVQAGTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    +             +Y +  +
Sbjct: 385 SRLLVPEVLVRGSDFHTIRPRRTYAELIS 413


>gi|218778271|ref|YP_002429589.1| diaminopimelate decarboxylase [Desulfatibacillum alkenivorans
           AK-01]
 gi|218759655|gb|ACL02121.1| diaminopimelate decarboxylase [Desulfatibacillum alkenivorans
           AK-01]
          Length = 417

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 61/385 (15%), Positives = 120/385 (31%), Gaps = 22/385 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP ++     L  +         +    +  + K      +         G    S  
Sbjct: 25  LGTPLFIYSHATLTRHFQAFDKAFGDVDHIICYSAKANTNGAILKMFADMGTGLDVVSGG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HK 116
           E+  G          AY    K  +   +  N         +  +L     +A+ L    
Sbjct: 85  ELHRGLKAGIPANKIAYAGVGKTQDEIDLALNSGILMFNVESFEELQAINARAKALGKKA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNCEN 169
            I LR+NP+V              ++ G   +  +E+           V G+ FH   + 
Sbjct: 145 PISLRVNPNVDAKTHPYISTGMKKNKFGIAKEAVVEAYKAAHELDSTEVVGIDFHIGSQI 204

Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSE 223
                F   +++++            I ++ +GGG+     D    +   + + + +   
Sbjct: 205 TQVGPFVEAMESVKSLAAELKGMGIGINYLDVGGGLGINYDDEEPPEPDEYAKAICKVIA 264

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES---A 279
            + + + LEPG A+V N   + T  L + E   KN +IVD+ +   +   +         
Sbjct: 265 DFPITVVLEPGRAMVGNAGIMVTRFLYLKEGATKNFIIVDAGMNDLIRPSIYGAFHLIQP 324

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                  P T  V G  C + D   +      V  GD ++      Y     + +N    
Sbjct: 325 VNKREGDPLTGDVVGPICESTDFLAKDREIGAVVPGDLLAVMSAGAYGFAMSSNYNSRPR 384

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
               +   +      +  +Y D   
Sbjct: 385 ACEVMVKGNAFEVIRQRENYEDLTR 409


>gi|23502831|ref|NP_698958.1| diaminopimelate decarboxylase [Brucella suis 1330]
 gi|62290831|ref|YP_222624.1| LysA, diaminopimelate decarboxylase [Brucella abortus bv. 1 str.
           9-941]
 gi|82700743|ref|YP_415317.1| diaminopimelate decarboxylase [Brucella melitensis biovar Abortus
           2308]
 gi|148560505|ref|YP_001259800.1| diaminopimelate decarboxylase [Brucella ovis ATCC 25840]
 gi|161619901|ref|YP_001593788.1| diaminopimelate decarboxylase [Brucella canis ATCC 23365]
 gi|189025050|ref|YP_001935818.1| diaminopimelate decarboxylase [Brucella abortus S19]
 gi|225628182|ref|ZP_03786217.1| diaminopimelate decarboxylase [Brucella ceti str. Cudo]
 gi|225853419|ref|YP_002733652.1| diaminopimelate decarboxylase [Brucella melitensis ATCC 23457]
 gi|237816345|ref|ZP_04595338.1| diaminopimelate decarboxylase [Brucella abortus str. 2308 A]
 gi|254690121|ref|ZP_05153375.1| diaminopimelate decarboxylase [Brucella abortus bv. 6 str. 870]
 gi|254694611|ref|ZP_05156439.1| diaminopimelate decarboxylase [Brucella abortus bv. 3 str. Tulya]
 gi|254696236|ref|ZP_05158064.1| diaminopimelate decarboxylase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254700621|ref|ZP_05162449.1| diaminopimelate decarboxylase [Brucella suis bv. 5 str. 513]
 gi|254704991|ref|ZP_05166819.1| diaminopimelate decarboxylase [Brucella suis bv. 3 str. 686]
 gi|254707493|ref|ZP_05169321.1| diaminopimelate decarboxylase [Brucella pinnipedialis M163/99/10]
 gi|254708966|ref|ZP_05170777.1| diaminopimelate decarboxylase [Brucella pinnipedialis B2/94]
 gi|254731154|ref|ZP_05189732.1| diaminopimelate decarboxylase [Brucella abortus bv. 4 str. 292]
 gi|256030493|ref|ZP_05444107.1| diaminopimelate decarboxylase [Brucella pinnipedialis M292/94/1]
 gi|256158479|ref|ZP_05456377.1| diaminopimelate decarboxylase [Brucella ceti M490/95/1]
 gi|256253898|ref|ZP_05459434.1| diaminopimelate decarboxylase [Brucella ceti B1/94]
 gi|256258375|ref|ZP_05463911.1| diaminopimelate decarboxylase [Brucella abortus bv. 9 str. C68]
 gi|256263101|ref|ZP_05465633.1| diaminopimelate decarboxylase [Brucella melitensis bv. 2 str. 63/9]
 gi|260169399|ref|ZP_05756210.1| diaminopimelate decarboxylase [Brucella sp. F5/99]
 gi|260546098|ref|ZP_05821838.1| diaminopimelate decarboxylase [Brucella abortus NCTC 8038]
 gi|260567535|ref|ZP_05838005.1| diaminopimelate decarboxylase [Brucella suis bv. 4 str. 40]
 gi|260755660|ref|ZP_05868008.1| diaminopimelate decarboxylase [Brucella abortus bv. 6 str. 870]
 gi|260758885|ref|ZP_05871233.1| diaminopimelate decarboxylase [Brucella abortus bv. 4 str. 292]
 gi|260760609|ref|ZP_05872952.1| diaminopimelate decarboxylase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260884685|ref|ZP_05896299.1| diaminopimelate decarboxylase [Brucella abortus bv. 9 str. C68]
 gi|261214935|ref|ZP_05929216.1| diaminopimelate decarboxylase [Brucella abortus bv. 3 str. Tulya]
 gi|261221035|ref|ZP_05935316.1| diaminopimelate decarboxylase [Brucella ceti B1/94]
 gi|261314977|ref|ZP_05954174.1| diaminopimelate decarboxylase [Brucella pinnipedialis M163/99/10]
 gi|261316465|ref|ZP_05955662.1| diaminopimelate decarboxylase [Brucella pinnipedialis B2/94]
 gi|261751130|ref|ZP_05994839.1| diaminopimelate decarboxylase [Brucella suis bv. 5 str. 513]
 gi|261755692|ref|ZP_05999401.1| diaminopimelate decarboxylase [Brucella suis bv. 3 str. 686]
 gi|261758922|ref|ZP_06002631.1| diaminopimelate decarboxylase [Brucella sp. F5/99]
 gi|265987535|ref|ZP_06100092.1| diaminopimelate decarboxylase [Brucella pinnipedialis M292/94/1]
 gi|265996995|ref|ZP_06109552.1| diaminopimelate decarboxylase [Brucella ceti M490/95/1]
 gi|297247217|ref|ZP_06930935.1| diaminopimelate decarboxylase [Brucella abortus bv. 5 str. B3196]
 gi|23348856|gb|AAN30873.1| diaminopimelate decarboxylase [Brucella suis 1330]
 gi|62196963|gb|AAX75263.1| LysA, diaminopimelate decarboxylase [Brucella abortus bv. 1 str.
           9-941]
 gi|82616844|emb|CAJ11940.1| Orn/DAP/Arg decarboxylase, family 2:ATP/GTP-binding site motif A
           (P-loop):Diaminopimelate decarboxylase [Brucella
           melitensis biovar Abortus 2308]
 gi|148371762|gb|ABQ61741.1| diaminopimelate decarboxylase [Brucella ovis ATCC 25840]
 gi|161336712|gb|ABX63017.1| diaminopimelate decarboxylase [Brucella canis ATCC 23365]
 gi|189020622|gb|ACD73344.1| diaminopimelate decarboxylase [Brucella abortus S19]
 gi|225617007|gb|EEH14054.1| diaminopimelate decarboxylase [Brucella ceti str. Cudo]
 gi|225641784|gb|ACO01698.1| diaminopimelate decarboxylase [Brucella melitensis ATCC 23457]
 gi|237788412|gb|EEP62627.1| diaminopimelate decarboxylase [Brucella abortus str. 2308 A]
 gi|260096205|gb|EEW80081.1| diaminopimelate decarboxylase [Brucella abortus NCTC 8038]
 gi|260157053|gb|EEW92133.1| diaminopimelate decarboxylase [Brucella suis bv. 4 str. 40]
 gi|260669203|gb|EEX56143.1| diaminopimelate decarboxylase [Brucella abortus bv. 4 str. 292]
 gi|260671041|gb|EEX57862.1| diaminopimelate decarboxylase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675768|gb|EEX62589.1| diaminopimelate decarboxylase [Brucella abortus bv. 6 str. 870]
 gi|260874213|gb|EEX81282.1| diaminopimelate decarboxylase [Brucella abortus bv. 9 str. C68]
 gi|260916542|gb|EEX83403.1| diaminopimelate decarboxylase [Brucella abortus bv. 3 str. Tulya]
 gi|260919619|gb|EEX86272.1| diaminopimelate decarboxylase [Brucella ceti B1/94]
 gi|261295688|gb|EEX99184.1| diaminopimelate decarboxylase [Brucella pinnipedialis B2/94]
 gi|261304003|gb|EEY07500.1| diaminopimelate decarboxylase [Brucella pinnipedialis M163/99/10]
 gi|261738906|gb|EEY26902.1| diaminopimelate decarboxylase [Brucella sp. F5/99]
 gi|261740883|gb|EEY28809.1| diaminopimelate decarboxylase [Brucella suis bv. 5 str. 513]
 gi|261745445|gb|EEY33371.1| diaminopimelate decarboxylase [Brucella suis bv. 3 str. 686]
 gi|262551463|gb|EEZ07453.1| diaminopimelate decarboxylase [Brucella ceti M490/95/1]
 gi|263093002|gb|EEZ17152.1| diaminopimelate decarboxylase [Brucella melitensis bv. 2 str. 63/9]
 gi|264659732|gb|EEZ29993.1| diaminopimelate decarboxylase [Brucella pinnipedialis M292/94/1]
 gi|297174386|gb|EFH33733.1| diaminopimelate decarboxylase [Brucella abortus bv. 5 str. B3196]
 gi|326409982|gb|ADZ67047.1| diaminopimelate decarboxylase [Brucella melitensis M28]
 gi|326539699|gb|ADZ87914.1| diaminopimelate decarboxylase [Brucella melitensis M5-90]
          Length = 421

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 64/389 (16%), Positives = 118/389 (30%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+  +  +  +         +    +  ALK  +   +   L +   G  + S  
Sbjct: 25  VGTPFYVYSRATIERHFRVFHDAFADMDTLVTYALKANSNQAVLTALAKLGAGADTVSQG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHK 116
           E+              ++   K       A+ +        +  +L     +  A     
Sbjct: 85  EIRRALAAGIPANRIVFSGVGKTPREMDFALEAGIYCFNVESEPELEILSARAVAAGKVA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            + LRINP V           +  ++ G        +  +       NV G+  H   + 
Sbjct: 145 PVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARAAYARAASLPGLNVVGIDMHIGSQI 204

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221
                F      +    KE       I  + +GGG+            P   + Q + + 
Sbjct: 205 IDLEPFDNAFALMAELVKELQADGHNIRHVDVGGGLGIPYRTDNTPPPPPVAYAQIVAKH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278
            +   ++   EPG  IV N   L T V+ + E + KN VIVD+++   +   L       
Sbjct: 265 IKPLGLKTVFEPGRLIVGNAGLLVTEVIFVKEGDAKNFVIVDAAMNDLIRPTLYDAFHDI 324

Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                   N     A   G  C  GD  G          GD I+      Y     + +N
Sbjct: 325 RPVIMPNDNAPRIRADFVGPVCETGDYLGLDREVAKPAPGDLIAICTTGAYGAVLSSTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    + + +         +Y +   
Sbjct: 385 SRLLIPEVLVDGERYHVVRPRRTYEELLA 413


>gi|308271344|emb|CBX27952.1| Diaminopimelate decarboxylase [uncultured Desulfobacterium sp.]
          Length = 427

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 71/385 (18%), Positives = 123/385 (31%), Gaps = 22/385 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y+     L  +        K     +  + K      +    ++   G    S  
Sbjct: 35  IGTPLYIYSHATLKRHFKAFNDAFKGVNKLVCFSAKANTNLAILSLFSKLGGGLDIVSGG 94

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116
           E+  G    +      Y+   K  +                ++ +L     +A  L K  
Sbjct: 95  ELYRGLKAGYASNKIVYSGVGKRIDEIDYALKMGILMFNVESMEELEIVDQRAGLLKKKA 154

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCEN 169
            + +R+NP V              ++ G   +  +E+           V GL  H   + 
Sbjct: 155 PVAIRVNPDVDPKTHPYISTGMKKNKFGINIEAAMEAYKVAAKLKNIKVIGLDCHIGSQI 214

Query: 170 KS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSE 223
                F     +LK + K+       I+++ LGGG+  T  D       ++   +KE   
Sbjct: 215 TQTGPFKDALYILKTMIKDLAACKINIKYLDLGGGLGITYNDEEPPDPVEYANAIKEVIG 274

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQES---A 279
              V++  EPG  IV N   L T VL      +K  +IVD+ +   V   L         
Sbjct: 275 DTKVKLIFEPGRVIVGNAGILVTKVLYRKSTGVKEFIIVDAGMNDLVRPTLYEAFHAIKP 334

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            +  +     A + G  C +GD        + V+ GD ++      Y     + +     
Sbjct: 335 VVDSDNEEIKADIVGPICESGDFLALDRNIQKVEQGDLLAVMSSGAYGFVMSSNYCSRLK 394

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
               + N D    A +   Y D   
Sbjct: 395 LAEVMVNGDKFQVARKRQKYEDLTR 419


>gi|221134092|ref|ZP_03560397.1| putative diaminopimelate decarboxylase [Glaciecola sp. HTCC2999]
          Length = 416

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 65/387 (16%), Positives = 127/387 (32%), Gaps = 25/387 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  ++ L  +         +    +  A+K  +  G+   L +   G    S  E
Sbjct: 26  GTPTYVYSRKTLERHWHKFDEALGDHPHLVCFAVKANSNIGVLSVLAKLGSGFDIVSGGE 85

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +          +   ++   K  +        N       + ++L++    A KL +   
Sbjct: 86  LKRVIAAGGDPQKVVFSGVGKTADEIEFALQQNILCFNVESFAELDRINAVAAKLDRPAR 145

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
             LRINP V  +           ++ G      +E+           + G+  H   +  
Sbjct: 146 ISLRINPDVDANTHPYISTGLKANKFGIAHTKAVETYLYAKALSYLEIKGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSE 223
               F   L+    +  E       IE + +GGG+  T  +     P +      ++   
Sbjct: 206 ETAPFVDALERLLGLVDELATHDIHIEHLDVGGGLGVTYANETPPLPSEYASAIAQKMQG 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATI- 281
           +  ++I +EPG AI  N   L T V  + +N      I+D+++   +   L       + 
Sbjct: 266 REHMKIIMEPGRAIAANAGVLLTKVEFLKQNEDKHFAIIDAAMNDLLRPALYSAWQNIVP 325

Query: 282 ---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
                +       V G  C  GD  G+      +   D ++ +    Y     + +N   
Sbjct: 326 ITPRDDVAAAVYDVVGPVCETGDFLGKDRELA-IVPDDILAVKSAGAYGFVMASNYNTRA 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYNN 365
            P   + + D  I         D ++N
Sbjct: 385 RPAEIMVDGDHVIVVREREKVEDLWHN 411


>gi|163844005|ref|YP_001628409.1| diaminopimelate decarboxylase [Brucella suis ATCC 23445]
 gi|163674728|gb|ABY38839.1| diaminopimelate decarboxylase [Brucella suis ATCC 23445]
          Length = 421

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 64/389 (16%), Positives = 118/389 (30%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+  +  +  +         +    +  ALK  +   +   L +   G  + S  
Sbjct: 25  VGTPFYVYSRATIERHFRVFHDAFADMDTLVTYALKANSNQAVLTALAKLGAGADTVSQG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHK 116
           E+              ++   K       A+ +        +  +L     +  A     
Sbjct: 85  EIRRALAAGIPANRIVFSGVGKTPREMDFALEAGIYCFNVESEPELEILSARAVAAGKVA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            + LRINP V           +  ++ G        +  +       NV G+  H   + 
Sbjct: 145 PVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARAAYARAASLPGLNVVGIDMHIGSQI 204

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221
                F      +    KE       I  + +GGG+            P   + Q + + 
Sbjct: 205 IDLEPFDNAFALMAELVKELQADGHNIRHVDVGGGLGIPYRTDNTPPPPPVAYAQIVAKH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278
            +   ++   EPG  IV N   L T V+ + E + KN VIVD+++   +   L       
Sbjct: 265 IKPLGLKTVFEPGRRIVGNAGLLVTEVIFVKEGDAKNFVIVDAAMNDLIRPTLYDAFHDI 324

Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                   N     A   G  C  GD  G          GD I+      Y     + +N
Sbjct: 325 RPVIMPNDNAPRIRADFVGPVCETGDYLGLDREVAKPAPGDLIAICTTGAYGAVLSSTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    + + +         +Y +   
Sbjct: 385 SRLLIPEVLVDGERYHVVRPRRTYEELLA 413


>gi|171060084|ref|YP_001792433.1| diaminopimelate decarboxylase [Leptothrix cholodnii SP-6]
 gi|170777529|gb|ACB35668.1| diaminopimelate decarboxylase [Leptothrix cholodnii SP-6]
          Length = 422

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 61/388 (15%), Positives = 116/388 (29%), Gaps = 26/388 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +L+ L             +  A+K  ++  +  T  +   G    S  E
Sbjct: 31  GTPLYVYSQASMLDALAAYQRALAGRPHLICYAMKANSSLAVLQTFARAGCGFDIVSGGE 90

Query: 63  VMLGH-EKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++   K       A+ +        + S+L      A +L     
Sbjct: 91  LQRVLAAGASASKVVFSGVGKTRTEMRQALEAGVRCFNVESESELALLSQVAVELGVRAP 150

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LR+NP V              ++ G   +  +             V G+  H   +  
Sbjct: 151 VSLRVNPDVDAGTHPYISTGLKGNKFGIAHEQALAVYRHAAQLPGIAVRGIDCHIGSQLT 210

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               F   L    ++ +        +  + LGGG+  T  D       + + +   +   
Sbjct: 211 EVAPFLDALDRILDLVEAIEAAGITLHHLDLGGGLGITYTDETPPSADELIAQLLARIDA 270

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES-- 278
                 +I  EPG ++V N   L T VL +         + D+++   +   +       
Sbjct: 271 RGHGHREIVFEPGRSLVGNAGVLLTEVLYLKPGETKNFCIVDAAMNDLMRPAMYEAWMGI 330

Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                 +    T  V G  C +GD  G       V  GD ++      Y +   + +N  
Sbjct: 331 VPCTERDAPAVTWDVVGPVCESGDWLGRERELA-VAPGDHLAILSAGAYGMAMASNYNTR 389

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYNN 365
                 +          R  S  + Y N
Sbjct: 390 GRAAEVMVRGHQATLIRRRESAAELYAN 417


>gi|158426283|ref|YP_001527575.1| diaminopimelate decarboxylase [Azorhizobium caulinodans ORS 571]
 gi|158333172|dbj|BAF90657.1| diaminopimelate decarboxylase [Azorhizobium caulinodans ORS 571]
          Length = 420

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 58/392 (14%), Positives = 111/392 (28%), Gaps = 27/392 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +            + L  ALK  +   +  TL +   G    S  
Sbjct: 25  VGTPFYCYSTATLERHYRVFKAAFAEREMLLCYALKANSNQAVIATLARMGAGADIVSGG 84

Query: 62  EVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116
           E+         GE   ++     ++    A+ +        +  +L+     A  + +  
Sbjct: 85  ELKRALAAGIPGERIVFSGVGKTREEMAQALEAGILCFNVESEPELSALSQVATAMGRTA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCEN 169
            I +RINP V           +  ++ G           +        V G+  H   + 
Sbjct: 145 NISIRINPDVDAKTHAKISTGKSENKFGIPISRARTVYAEAATLPGLKVAGIDMHIGSQI 204

Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221
                F      + +           +  + LGGG+                +   +   
Sbjct: 205 TDLGPFENATLLMAELARDLLAQGHALHHLDLGGGLGVPYVAGDPVPPSPDAYAAVITRA 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
            +   + +  E G  IV N   L   V+ +     K  VIVD+++   +   L       
Sbjct: 265 LKGLDLPLVFEMGRMIVANAGILVARVIYVKHGEGKTFVIVDAAMNDLIRPTLYEAHHDI 324

Query: 281 IYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
           +  +  P        V G  C  GD          +  GD I+      Y   + + +N 
Sbjct: 325 VPVHQRPSAPTAKVDVVGPVCETGDYLALDRELPELMPGDLIAVMTAGAYGAVQASTYNT 384

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYY--NNL 366
             +    + +                   + L
Sbjct: 385 RPLIAEVLVSGHQAAVVRPRVEVEQLIGLDRL 416


>gi|187476584|ref|YP_784608.1| diaminopimelate decarboxylase [Bordetella avium 197N]
 gi|115421170|emb|CAJ47654.1| diaminopimelate decarboxylase [Bordetella avium 197N]
          Length = 429

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 61/388 (15%), Positives = 120/388 (30%), Gaps = 26/388 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+  +  L    D+         V +   +K  +   +     +   G    S  
Sbjct: 37  LGTPLYVYSRAALRAAYDSYRLAIGERPVLVCYGMKANSNLAVLKEFARMGAGFDIVSGG 96

Query: 62  EVMLGHE-KFGGETHAYNV-AYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+              ++    +  E+     +        + ++L++    AQ   K  
Sbjct: 97  ELKRVLAVGGDPAKIVFSGVGKQAWEMREALEAGVKCFNVESTAELHRLSKVAQATGKVA 156

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
              LR+NP V              ++ G   ++ + +           V G+  H   + 
Sbjct: 157 RVSLRVNPDVDAQTHPYISTGLKENKFGIAIEEALAAYQTAASLPGLQVVGVDCHIGSQL 216

Query: 170 KSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY- 225
                +   L    ++         +IE + LGGG+     D         L E   +  
Sbjct: 217 TDISPYFDALDKLLDLIDRMAETGIRIEHLDLGGGLGIRYTDEVPPSPKALLDEVFNRLQ 276

Query: 226 -----SVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQES- 278
                 + + LEPG ++V N   L TTV  +  N  +N  IVD+++   +   L      
Sbjct: 277 ARGYGHLHLVLEPGRSLVGNAGLLLTTVQFLKHNDARNFAIVDAAMNDLLRPTLYQAYHG 336

Query: 279 --ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
               +          V G  C +GD   +      ++  D ++ E    Y +     +N 
Sbjct: 337 VRPVVPRAGEARVYDVVGPVCESGDWLAKERALA-IEQDDVLALESAGAYGMVMAGNYNT 395

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364
                  + +        +  S +D   
Sbjct: 396 RARAAEVMVDGAQYHVVRQRESLDDLLR 423


>gi|85714907|ref|ZP_01045893.1| diaminopimelate decarboxylase [Nitrobacter sp. Nb-311A]
 gi|85698393|gb|EAQ36264.1| diaminopimelate decarboxylase [Nitrobacter sp. Nb-311A]
          Length = 421

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 53/390 (13%), Positives = 105/390 (26%), Gaps = 26/390 (6%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           ++ TP+Y      L  +              +  A+K  +   +  T+ +   G    S 
Sbjct: 24  VVGTPFYCYSTATLERHYRVFAEAFAGTDHLVCYAVKANSNQSVLRTMAKLGAGADVVSG 83

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKK 117
            E+              ++   K           D   I   +  +L+     A +  + 
Sbjct: 84  GELKRALAAEIPANKILFSGVGKTEAELRAALAADVLCINVESEPELDLLSRLASETGRT 143

Query: 118 IGLRI--NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCE 168
             + +  NP V           R  ++ G           +        V G+  H   +
Sbjct: 144 ARVSVRINPDVDSGAHAKISTGRLENKFGIPITQARAVYARAAKLPGIKVTGVDMHIGSQ 203

Query: 169 NKSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKE 220
                      + +             +  +  GGG+     +          +   ++ 
Sbjct: 204 ITDLGPMETAFRLLADFVSTLRADGHVVSHVDFGGGLGIPYYEDRSAPPEPLAYADMVRR 263

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESA 279
            +      +  EPG  IV N   L T V+ +   N +N VI+D+++   +   L      
Sbjct: 264 VTRNLDCTLMFEPGRMIVGNAGILVTRVIYVKHGNARNFVIIDAAMNDLIRPTLYEAYHQ 323

Query: 280 TIYPNTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
            +     P       A V G  C  GD           + GD ++      Y   +   +
Sbjct: 324 IMPVRAAPKDAAVMVADVVGPVCETGDYLALERNLPEPQAGDLLAIMTAGAYGAVQSGTY 383

Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           N   +    +   D                
Sbjct: 384 NTRALIPEVLVKGDQYAVVRPRIEVEQLIA 413


>gi|32266317|ref|NP_860349.1| carboxynorspermidine decarboxylase NspC [Helicobacter hepaticus
           ATCC 51449]
 gi|32262367|gb|AAP77415.1| carboxynorspermidine decarboxylase NspC [Helicobacter hepaticus
           ATCC 51449]
          Length = 411

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 126/397 (31%), Positives = 201/397 (50%), Gaps = 34/397 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P Y+++++KL  NL     +++ +G K+LLALK +A W +F+ L   + G+T+S LY
Sbjct: 15  LPSPAYVLEEEKLNANLALLDSVQQRSGAKILLALKGYAFWRVFENLKCTLSGSTASGLY 74

Query: 62  EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK------ 110
           E  LG+E+ GG     E   ++ AYK  E +++L+    IIFN+  Q  +FK        
Sbjct: 75  EARLGYEEIGGANKGKEVCVFSPAYKKEEFESILNYATHIIFNSFYQWQRFKPLIESKNT 134

Query: 111 ----AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK----IESEIKNVNGLM 162
                 +   ++GLR+NP  S  +  + +P    SRLG    +      +  +  ++GL 
Sbjct: 135 MLKAHSQAPIEVGLRVNPLYSEVEPPIYNPCIAGSRLGITPNEFQKGVAQYGLDGISGLH 194

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
           FH +CE  S       L + EK FG +I   +W++ GGG H T  DY        + +F 
Sbjct: 195 FHTHCEQDSAALSRT-LPHFEKHFGAYIQGKKWVNFGGGHHITRVDYDCDLLVNLICDFK 253

Query: 223 EKYSVQIY-LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
            +Y      LEPGEA+      L   V+DI +N  ++ I+D S  AH+PD L      ++
Sbjct: 254 RRYKDIEIFLEPGEAVGWQVGFLIGEVIDIVQNEISVAILDVSAAAHMPDCLEMPYRPSL 313

Query: 282 YP-------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
                            G Y   + G +CLAGD+ G++ F+ P+ IGDR+ FED+  Y I
Sbjct: 314 IKLSKQTGLESDKGEGKGAYAYRLGGPTCLAGDVIGDYSFDTPLCIGDRVIFEDMLHYTI 373

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            + N FNG+ +P++ V +  G  K ++ F Y DY   
Sbjct: 374 VKNNTFNGVPLPSLGVIDTQGVWKLLKSFGYEDYKQR 410


>gi|325111253|ref|YP_004272321.1| diaminopimelate decarboxylase [Planctomyces brasiliensis DSM 5305]
 gi|324971521|gb|ADY62299.1| diaminopimelate decarboxylase [Planctomyces brasiliensis DSM 5305]
          Length = 429

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 54/395 (13%), Positives = 118/395 (29%), Gaps = 33/395 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++  + K L          +     +  ++K  +   +   LN+        S  E
Sbjct: 30  GTPLWVYSEAKFLEEFRQLKKAFEACDPVICYSVKANSNLHVLKALNEAGSSFDVVSGGE 89

Query: 63  V-MLGHEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +  +           +    K       A+  N       + ++L+     A+++     
Sbjct: 90  LFRVLKAGADTTRVVFAGVGKTDAEIRLALEQNILMFNVESEAELDAIAAVAREMDVVAP 149

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170
           + LR+NP +           +  ++ G   +         +      + G+  H      
Sbjct: 150 VALRLNPDIDAKTHKKTTTGKKGNKFGMDIERHNALADKVLTEPHLELRGIHMHLGSPIL 209

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
           +   +    K   ++  +       I W++LGGG   + ++        +   +    + 
Sbjct: 210 TTDPYEQAAKKAVDVIADLRKKGHDISWVNLGGGFALSYRNDEAPDYSTYASVIVPHIQA 269

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIYP 283
              ++ LEPG +I+ N   L + V+          VI D ++       +          
Sbjct: 270 AGCKLALEPGRSIIGNACVLVSQVIYTKREGGKLFVIQDGAMNDLARPAMYDAFHRVWPV 329

Query: 284 N--------------TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
                           G     V G  C + D F +     P++ GD IS      Y   
Sbjct: 330 QTDVPLPYDCEAAEIEGCEATDVVGPVCESSDYFAKDRALPPLQRGDLISTFSAGAYGSA 389

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             + +N        + +        +  +Y+D   
Sbjct: 390 MSSNYNSRPRGAEVLVSGSEARLIRKRETYDDLIA 424


>gi|288817402|ref|YP_003431749.1| diaminopimelate decarboxylase [Hydrogenobacter thermophilus TK-6]
 gi|288786801|dbj|BAI68548.1| diaminopimelate decarboxylase [Hydrogenobacter thermophilus TK-6]
 gi|308751009|gb|ADO44492.1| diaminopimelate decarboxylase [Hydrogenobacter thermophilus TK-6]
          Length = 415

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 59/380 (15%), Positives = 111/380 (29%), Gaps = 25/380 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+     + + +             +  A+K      +     +   G    S  E
Sbjct: 31  GTPLYVYSASHIRDRVRAYREAF--PDALICYAVKANFNPSIIRVAREEGAGADIVSGGE 88

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
           +              Y    K  +        D       +  +L+     A+ L KKI 
Sbjct: 89  LYASLLAGVEPSRIVYAGVGKTLKELEYAIKSDILMFNVESRMELDVLNHLAESLGKKIR 148

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           +  R+NP V              S+ G   K   +            V G+  H   +  
Sbjct: 149 IAIRVNPDVDPKTHPYISTGMKKSKFGVDIKHAKQEYQYAGKLKNLEVVGIHCHIGSQIL 208

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF----CQRLKEFSE 223
               +   ++   ++  E      +I ++ +GGG+    K            + +    +
Sbjct: 209 DVSPYIEAVEKVVDLYHELVRSGFEIRYVDIGGGLGIKYKPDQSNPEPKDLAEAVMPALK 268

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIY 282
               +I LEPG +IV N   L T V  + +   K+ VIVD+ +   +   +       + 
Sbjct: 269 GVDAKILLEPGRSIVGNAGLLITRVEFLKDKGHKHFVIVDAGMNDLIRPAMYDAYHHIVP 328

Query: 283 PNTGPYTA---MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       + G  C  GD        + V+ GD ++      Y     + +N    
Sbjct: 329 VVKRDTGYIKTDIVGPICETGDFLALDREIQKVERGDYLAVLSAGAYGFAMSSHYNVRPR 388

Query: 340 PTIAVKNVDGTIKAIREFSY 359
               +             +Y
Sbjct: 389 ACEVLVEKQSYKIIRERETY 408


>gi|295706474|ref|YP_003599549.1| diaminopimelate decarboxylase [Bacillus megaterium DSM 319]
 gi|294804133|gb|ADF41199.1| diaminopimelate decarboxylase [Bacillus megaterium DSM 319]
          Length = 439

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 54/400 (13%), Positives = 127/400 (31%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   +           +  GVK  +  A K F+   M   +++        S 
Sbjct: 30  GTPLYVYDVALIRQRARGFKETFEKHGVKAQVAYASKAFSTIAMVQVVHEEGLSLDVVSG 89

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKA--QKLH 115
            E+       F  E   ++   K      +    D   I+ +   ++   ++     +  
Sbjct: 90  GELYTALAADFPKERIHFHGNNKSRAELEMAIKEDVGCIVVDNFYEIALLQEITEQYQKK 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             + LR+ P +           +  S+ G         E  +    S+   + G+  H  
Sbjct: 150 MPVLLRLTPGIEAHTHDYILTGQEDSKFGFDLQNGQADEAVRLVQNSKGLELLGIHCHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWI----SLGGGIHFTDKDYPVKDF-------- 214
            +      F    + +  +   +  +I+++    +LGGG      +              
Sbjct: 210 SQIFETTGFIMATQKLFAKMKEWKQRIKFVPQVLNLGGGFGIRYTEEDQPIPVSQYVEVI 269

Query: 215 CQRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269
            + +K+ S++      +I++EPG ++V +  T   ++              +D  +  ++
Sbjct: 270 IEEVKKQSKQLEVEIPEIWIEPGRSLVGDAGTTLYSIGSRKHVPNVREYVAIDGGMNDNI 329

Query: 270 PDYLLYQESATI----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   +      +       + G+ C +GD+             D ++      
Sbjct: 330 RPALYQAKYEAVIANRMNDESDELVSIAGKCCESGDMLMWDVQLPKANPDDLLAMFCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  + +N +  P +           ++  +Y D   N
Sbjct: 390 YGYSMASHYNRLPKPAVVFVEDGEAQLVVKRETYEDIVKN 429


>gi|261250031|ref|ZP_05942608.1| diaminopimelate decarboxylase [Vibrio orientalis CIP 102891]
 gi|260939535|gb|EEX95520.1| diaminopimelate decarboxylase [Vibrio orientalis CIP 102891]
          Length = 417

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 56/378 (14%), Positives = 108/378 (28%), Gaps = 24/378 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  + +            +  A+K  +  G+ + L +   G    S  E
Sbjct: 27  GTPLYVYSRATLERHWNAFDKSVGEHPHLVCYAVKANSNLGVLNALARLGSGFDIVSGGE 86

Query: 63  V-MLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +  +           ++   K       A+          +  +L +    A +L     
Sbjct: 87  LERVIAAGGDAAKVVFSGVGKTEAEMKRALELGIKCFNVESEPELERLNKVAGELGVKAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           I LRINP V  +           ++ G                   +V G+  H   +  
Sbjct: 147 ISLRINPDVDANTHPYISTGLRDNKFGIAFDRAPAVYKFAQSLDNLDVRGIDCHIGSQLT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
               F         +  +       IE + +GGG+    +D       +  K    +   
Sbjct: 207 DIEPFIDATDRLLALIDDLKAQGVTIEHLDVGGGLGVVYRDELPPQPSEYAKALLGRLEN 266

Query: 228 Q----IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279
                +  EPG AI  N   L T V  +         I+D+++   +   L         
Sbjct: 267 HQDLELIFEPGRAIAANAGVLLTKVEFLKHTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            I          + G  C  GD  G+      ++  D ++      Y     + +N  + 
Sbjct: 327 VIPREGEAVAYDLVGPICETGDFLGKDRALV-LEENDLLAVRSAGAYGFVMSSNYNTRSR 385

Query: 340 PTIAVKNVDGTIKAIREF 357
               + +        +  
Sbjct: 386 AAEVMVDGKQAHLVRQRE 403


>gi|59713092|ref|YP_205868.1| diaminopimelate decarboxylase, PLP-binding [Vibrio fischeri ES114]
 gi|59481193|gb|AAW86980.1| diaminopimelate decarboxylase, PLP-binding [Vibrio fischeri ES114]
          Length = 417

 Score =  230 bits (585), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 57/378 (15%), Positives = 108/378 (28%), Gaps = 24/378 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         N    +  A+K  +  G+ + L +   G    S  E
Sbjct: 27  GTPLYVYSRATLERHWKAFDNSVGNHPHLVCYAVKANSNIGVLNALARLGSGFDIVSQGE 86

Query: 63  V-MLGHEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +  +           ++   K  D    A+          +  +L +    A    +   
Sbjct: 87  LERVVAAGGDPTKVVFSGVGKTADEMRRALELKIKCFNVESEPELERLNAVAAEMGVIAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           I LRINP V              ++ G       E           +V G+  H   +  
Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGIAFDHAPEVYKFAQSLPNLDVQGIDCHIGSQLT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F         +  +       I  + +GGG+           P +     L   +E
Sbjct: 207 DIEPFIDATDRLLALIDDLKAQGVNIRHLDVGGGLGVVYRDELPPQPSEYATALLGRLAE 266

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279
              +++  EPG AI  N   L T V  +         I+D+++   +   L         
Sbjct: 267 HQDLELIFEPGRAIAANAGILVTKVEFLKHTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            +          + G  C  GD  G+      ++  D ++      Y     + +N    
Sbjct: 327 VVPREGDAQNYDLVGPICETGDFLGKDRALV-LEANDLLAVRSSGAYGFVMSSNYNTRCR 385

Query: 340 PTIAVKNVDGTIKAIREF 357
               + +        +  
Sbjct: 386 AAEIMVDGGDVHLVRKRE 403


>gi|33594517|ref|NP_882161.1| diaminopimelate decarboxylase [Bordetella pertussis Tohama I]
 gi|33564593|emb|CAE43910.1| diaminopimelate decarboxylase [Bordetella pertussis Tohama I]
 gi|332383928|gb|AEE68775.1| diaminopimelate decarboxylase [Bordetella pertussis CS]
          Length = 429

 Score =  230 bits (585), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 59/388 (15%), Positives = 121/388 (31%), Gaps = 26/388 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+  +  L +  +T         V +   +K  +   +     +   G    S  
Sbjct: 37  LGTPLYVYSRAALRSAWETYRDAIGERPVLVCFGMKTNSNLAVLKEFARLGAGFDIVSGG 96

Query: 62  EVMLGHE-KFGGETHAYNV-AYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
           E+              ++    +  E+ A L          + ++L +  D A  + ++ 
Sbjct: 97  ELARVLAVGGDPAKVVFSGVGKQAWEMRAALEADVKCFNVESEAELERLSDVAVSMGRRA 156

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNCEN 169
              LR+NP V              ++ G   +    +           V G+  H   + 
Sbjct: 157 RVSLRVNPDVDAQTHPYISTGLKENKFGIAIESAPAAYRLAARLPGVEVVGVDCHIGSQL 216

Query: 170 KSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY- 225
                +   L+   ++ ++       I+ + LGGG+     D         L    E+  
Sbjct: 217 TDISPYFDALEKLLDLIEQLAENGIAIKHLDLGGGLGIRYTDEIPPSPKALLDRVFERIN 276

Query: 226 -----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES- 278
                 + I LEPG ++  N   L TTV  +     +N  IVD+++   +   L      
Sbjct: 277 ARGLGHLHIVLEPGRSLAGNAGVLLTTVQYLKHAEARNFAIVDAAMNDLLRPALYEAYHG 336

Query: 279 --ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                          V G  C + D          ++ GD ++ E    Y++   + +N 
Sbjct: 337 VQPVTPRADKRIEYDVVGPVCESADWLARGRALA-IQAGDVLAVESAGAYSMVMASNYNT 395

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364
                  + + +      +  +    Y 
Sbjct: 396 RVRAAEVMVDGNRHYIVRQRETLESLYQ 423


>gi|255036726|ref|YP_003087347.1| diaminopimelate decarboxylase [Dyadobacter fermentans DSM 18053]
 gi|254949482|gb|ACT94182.1| diaminopimelate decarboxylase [Dyadobacter fermentans DSM 18053]
          Length = 409

 Score =  230 bits (585), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 63/384 (16%), Positives = 119/384 (30%), Gaps = 25/384 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+ D   +        Y      +K+  A K      +   + +        S  E
Sbjct: 24  GSPLYVYDGATIRRKAAELQYAFAGVNMKIKFACKANTNLAILRLMREIGVELDVVSPGE 83

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           + +G    +      +  +  D E     +     +  +++  L  F          + +
Sbjct: 84  LEMGKIAGYDASQITFTPSGVDFEEVREAVETGAIVNVDSLPLLEWFGQTYGNSKPCM-I 142

Query: 121 RINPSVSYSKFILADPNRPFSRLGE------KCKDKIESEIKNVNGLMFHNNCENKSFLC 174
           RI P+V+             S+ G       +  + I+     V GL  H   + K    
Sbjct: 143 RIKPNVAAGGHTKIMTAHADSKFGISVLLLDEILEMIKKYDIKVIGLHQHTGSDIKDAEP 202

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI----- 229
           F   + +I  E       ++ I LGGG   +            L +   K          
Sbjct: 203 FLK-VADILLETAKHFPDLQIIDLGGGFKVSYLPGDAITDMDLLGKKISKRFRTFCEEYG 261

Query: 230 -----YLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESATIYP 283
                + EPG+ +V+ +  L  T   + E+  +N V VDS +   +   +       +  
Sbjct: 262 RDLQLWFEPGKFLVSESGFLFVTTNVVKEDPARNFVHVDSGLNHLIRPMMYGSYHHILNI 321

Query: 284 NT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
           +     P    V G  C   D F        V+ GD ++F +   Y +   + +N    P
Sbjct: 322 SNPKGEPKHYNVVGYICET-DTFATDRELPEVRQGDVLAFLNAGAYGLTMSSNYNARFRP 380

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + +        R  +  D   
Sbjct: 381 AEVLIDNGEAKLVRRRETMEDLLR 404


>gi|261867422|ref|YP_003255344.1| diaminopimelate decarboxylase [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261412754|gb|ACX82125.1| diaminopimelate decarboxylase [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 416

 Score =  230 bits (585), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 62/389 (15%), Positives = 117/389 (30%), Gaps = 25/389 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  K  L ++         N    +  A+K      + + + +   G    S  E
Sbjct: 26  GTPLYVYSKAALEHHWYAFENAFGNHPHLVCFAVKSNPNIAILNIMARLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +              ++   K     A             + ++L +    A        
Sbjct: 86  LERVLAAGGEAHKVVFSGVAKSRREIARALEVGIRCFNIESEAELLRINQVAGDIGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G   +   E            + G+  H   +  
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVEQAREVYKLATTLPNIEIVGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F      +     +      Q++ + LGGG+  T       +P +      ++ S 
Sbjct: 206 ELQPFLDAADRLIMLMEQLKQDSIQLKHLDLGGGLGVTYTDETPPHPTEYAKALWEKLSA 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
              ++I +EPG AI  N   L T V  +     +N  IVD+ +   +   L       + 
Sbjct: 266 FNELEIIVEPGRAITANAGILVTKVEYLKSNESRNFAIVDAGMNDMIRPALYQAYMNILE 325

Query: 283 PNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +           V G  C   D  G+      +  GD ++      Y  +  + +N   
Sbjct: 326 IDRTLAREEKIYDVVGPICETSDFLGKQRKLA-IAEGDYLAQRSAGAYGASMSSNYNSRP 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYNNLS 367
                + + D      R  + N+ +   S
Sbjct: 385 RTAEVMVDGDNAYLIRRREALNELWRLES 413


>gi|150020935|ref|YP_001306289.1| diaminopimelate decarboxylase [Thermosipho melanesiensis BI429]
 gi|149793456|gb|ABR30904.1| diaminopimelate decarboxylase [Thermosipho melanesiensis BI429]
          Length = 382

 Score =  230 bits (585), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 64/373 (17%), Positives = 123/373 (32%), Gaps = 14/373 (3%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+YL  ++ L+  +     + K A +    A+K      +   + +   G       E
Sbjct: 9   ETPFYLYFEKTLIERISMVKDVFKEANIFPTFAVKANNNPHLLKIIAKNGFGMDILGEGE 68

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +         GE   +N   K  +   V+     + +  ++  + +       +    + 
Sbjct: 69  LHACKLANIPGEKIIWNGNGKTEKQKKVMKEYGVNYVNIDSKEEFDLLWK--TEESFNLF 126

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-VNGLMFHNNCENKSFLCFSAM 178
           LR+NP +               + G       +      + GL  H   +      F   
Sbjct: 127 LRVNPDIDAKTHPYISTGLKSHKFGVSFNVAKDILKSGKITGLHLHIGSQITDVEPFKEA 186

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK--EFSEKYSVQIYLEPGEA 236
           ++   +    +   I+ I++GGG   +  +    D  +  K           +  E G  
Sbjct: 187 IEKTLELAKKY--NIKHINIGGGWGISYNEEKELDLEKYKKEVIPFLSEFDMVINEIGRF 244

Query: 237 IVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY--TAMVC 293
           I+     L T V+ +     K  V+V+S +   +   L          N       A + 
Sbjct: 245 IIAPAGVLVTKVILVKETENKTFVVVESGMNHLIRPALYNAYHEIEVLNNSLEYIKADIV 304

Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353
           G  C  GD   +    K V   D +  ++   Y  +  N +NG   P   +  VDG    
Sbjct: 305 GPLCETGDFLAKDRKIKKVNTNDILIIKNTGAYGYSMSNNYNGTTRPAEVLVTVDGKDIL 364

Query: 354 IRE-FSYNDYYNN 365
           IR   + +D + N
Sbjct: 365 IRRKETIDDLFRN 377


>gi|217979913|ref|YP_002364060.1| diaminopimelate decarboxylase [Methylocella silvestris BL2]
 gi|217505289|gb|ACK52698.1| diaminopimelate decarboxylase [Methylocella silvestris BL2]
          Length = 422

 Score =  230 bits (585), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 65/388 (16%), Positives = 113/388 (29%), Gaps = 26/388 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +        +     +  A+K  +   +  TL +   G    S  
Sbjct: 25  VGTPFYCYSSATLSRHYRVFKSALEGIDSLVCYAVKANSNQAVLTTLARLGAGMDVVSEG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF----KDKAQKLHK 116
           E+              ++   K  +  A         FN  S+           A     
Sbjct: 85  ELRRALAAGAPASQITFSGVGKTKQEMAFALKAGIFCFNVESEPELLALSEVASAIGSTA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCEN 169
           +I +R+NP V           +  ++ G       E            V+G+  H   + 
Sbjct: 145 RIAIRVNPDVDAKTHAKISTGKSENKFGVPISRAREVYAEAGRLPNIKVSGVDLHIGSQI 204

Query: 170 KSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKE 220
                F A  K               I+ + +GGG+            Y    + + L+ 
Sbjct: 205 TDLEPFDASFKLAAGFVATLRADGHDIDHVDVGGGLGIPYREGDDPASYHPDRYARILRA 264

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESA 279
                  +I  EPG  IV N   L T VL +     K  VIVD+++   +   L      
Sbjct: 265 RLGPLECRIVCEPGRLIVGNAGILVTRVLYLKRGEAKTFVIVDAAMNDLIRPTLYDAYHE 324

Query: 280 TI----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                   +     A V G  C  GD           + GD ++      Y   + + +N
Sbjct: 325 IRPVRPRADAPEILADVVGPVCETGDYLALGRKMAAPQPGDLLAIMSAGAYGATQSSTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY 363
              +    + N           +Y++  
Sbjct: 385 SRLLIPEVLVNGAAYAVVRPRPAYDELI 412


>gi|319761552|ref|YP_004125489.1| diaminopimelate decarboxylase [Alicycliphilus denitrificans BC]
 gi|330823421|ref|YP_004386724.1| diaminopimelate decarboxylase [Alicycliphilus denitrificans K601]
 gi|317116113|gb|ADU98601.1| diaminopimelate decarboxylase [Alicycliphilus denitrificans BC]
 gi|329308793|gb|AEB83208.1| diaminopimelate decarboxylase [Alicycliphilus denitrificans K601]
          Length = 429

 Score =  230 bits (585), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 56/388 (14%), Positives = 114/388 (29%), Gaps = 27/388 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +L  L           V++  A+K  ++  +     Q+  G    S  E
Sbjct: 34  GTPLYVYSQASMLQALAAYQRGFAGRRVQICYAMKANSSLAVLQLFAQHGCGFDIVSGGE 93

Query: 63  VMLGHE--KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +           +     V   +     A+ +        + ++L    + AQ +     
Sbjct: 94  LERVMAAGGDPAKVIFSGVGKTRAEMRQALEAGIGCFNVESEAELEVLSEVAQSMGLRAP 153

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGE-------KCKDKIESEIKNVNGLMFHNNCENK 170
           I +R+NP+V              ++ G          +   +     V G+  H   +  
Sbjct: 154 ISIRVNPNVDAKTHPYISTGLKGNKFGIAHERTLDTYRRAAQLPGLRVVGIDCHIGSQIT 213

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               +   +    ++ +        I  I  GGG+                     K   
Sbjct: 214 EETPYLDAMDRLLDLVQAIEAAGIAIHHIDFGGGLGIDYNGDTPPAADALWSSLLAKLDA 273

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESAT 280
                  + +EPG ++V N     T VL +    +     VD+++       +     A 
Sbjct: 274 RGYGDRLLMIEPGRSLVGNAGVCLTQVLYLKPGEQKNFCVVDAAMNDLPRPAMYQAYHAI 333

Query: 281 IYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
           +  +           V G  C +GD  G+      V  GD ++      Y  +  + +N 
Sbjct: 334 VPLDAAAKAPEQVYDVVGPICESGDWLGKDRSLA-VAAGDMLAVLSTGAYCSSMGSTYNT 392

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364
              P   + +             +D + 
Sbjct: 393 RARPAEVLVDGAQAHLIRAREGISDIFR 420


>gi|150397736|ref|YP_001328203.1| diaminopimelate decarboxylase [Sinorhizobium medicae WSM419]
 gi|150029251|gb|ABR61368.1| diaminopimelate decarboxylase [Sinorhizobium medicae WSM419]
          Length = 422

 Score =  230 bits (585), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 60/388 (15%), Positives = 109/388 (28%), Gaps = 26/388 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +         +    +  A+K  +   +  TL +   G    S  
Sbjct: 25  VGTPFYCYSTATLERHYKVFSQAFADVDAMVCYAMKANSNQAVLKTLGRLGAGLDVVSEG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E+              ++   K       A+ +        +  +L     +  +     
Sbjct: 85  ELRRALAAGIPPSRIMFSGVGKTAREMDFALEAGIYCFNVESEPELEVLNQRGVRAGKRA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
            +  RINP V           +  ++ G   +                V G+  H   + 
Sbjct: 145 PVSFRINPDVDARTHAKISTGKKENKFGISWERARSVYAHAATLPGIEVTGIDMHIGSQI 204

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221
                F    K +             IE + LGGG+    ++          +   +K  
Sbjct: 205 TELQPFDDAFKLLRELVDTLRSDGHVIEHVDLGGGLGIPYREDNNPPPLPDAYADVVKNQ 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
            +    +I  EPG  IV N   L T V+ + +   K  VIVD ++   +   L       
Sbjct: 265 LKGLDCKIVTEPGRLIVGNAGILVTEVVYVKDGGDKTFVIVDGAMNDLIRPTLYEAYHEI 324

Query: 281 IYPN-----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                         A V G  C  GD           + GD ++      Y   +   +N
Sbjct: 325 RPVRISAASAPRIKADVVGPVCETGDYLALDREMAMPRAGDLLAIGSAGAYGAVQAGTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY 363
              +    +   D          Y++  
Sbjct: 385 SRLLVPEVLVKGDRFHVIRPRKDYDELI 412


>gi|33151309|ref|NP_872662.1| diaminopimelate decarboxylase [Haemophilus ducreyi 35000HP]
 gi|33147529|gb|AAP95051.1| diaminopimelate decarboxylase [Haemophilus ducreyi 35000HP]
          Length = 417

 Score =  230 bits (585), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 57/387 (14%), Positives = 115/387 (29%), Gaps = 25/387 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K      + + + +   G    S  E
Sbjct: 26  GTPAYIYSRATLEQHWRAFDEAFGDRPHLICFAVKSNPNLAVLNVMAKLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +              ++   K       A+          +V++L++    A +L K   
Sbjct: 86  LERVLAAGGDPAKIVFSGVAKSHIEIRRALAVGIHCFNVESVAELHRINQIAGELGKIAT 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G   +                V GL  H   +  
Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGISVQQARAVYQLASRLPHIQVVGLDCHIGSQLT 205

Query: 171 SFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
               F      +            ++  + LGGG+             + ++    K++ 
Sbjct: 206 ELQPFLDAADRLIVLLEQLYRDGIRLSHLDLGGGLGVVYHTETPPQPAEYVRALLAKFAH 265

Query: 228 ----QIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
               +I LEPG AI  +   L T V  +     ++  IVD+ +   +   L         
Sbjct: 266 YPELEIILEPGRAITADAGILVTKVEYLKSNEDRHFAIVDTGMNDLLRPALYDAYMHISE 325

Query: 283 PNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +           V G  C   D  G+      +  GD ++      Y  +  + +N   
Sbjct: 326 VDQSLKRVEQQYEVVGPICETADFLGKARTLA-IAEGDLLAVYSAGAYGASMSSTYNSRP 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYNN 365
                + +   +    +   + + + N
Sbjct: 385 QAVEIMVDGATSHLIKKRSDFAELWRN 411


>gi|306842881|ref|ZP_07475518.1| diaminopimelate decarboxylase [Brucella sp. BO2]
 gi|306286968|gb|EFM58485.1| diaminopimelate decarboxylase [Brucella sp. BO2]
          Length = 421

 Score =  230 bits (585), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 63/389 (16%), Positives = 118/389 (30%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+  +  +  +         +    +  ALK  +   +   L +   G  + S  
Sbjct: 25  VGTPFYVYSRATIERHFRVFHDAFADMDTLVTYALKANSNQAVLTALAKLGAGADTVSQG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHK 116
           E+              ++   K       A+ +        +  +L     +  A     
Sbjct: 85  EIRRALAAGIPANRIVFSGVGKTPREMDFALEAGIYCFNVESEPELEILSARAVAAGKVA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            + LRINP V           +  ++ G        +  +       NV G+  H   + 
Sbjct: 145 PVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARAAYARAASLPGLNVVGIDMHIGSQI 204

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221
                F      +    KE       I  + +GGG+            P   + + + + 
Sbjct: 205 IDLEPFDNAFALMAELVKELQADGHNIRHVDVGGGLGIPYRTDNTPPPPPVAYAEIVAKH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278
            +   ++   EPG  IV N   L T V+ + E + KN VIVD+++   +   L       
Sbjct: 265 IKPLGLKTVFEPGRLIVGNAGLLVTEVIFVKEGDAKNFVIVDAAMNDLIRPTLYDAFHDI 324

Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                   N     A   G  C  GD  G          GD I+      Y     + +N
Sbjct: 325 RPVIVPNDNAPRIRADFVGPVCETGDYLGLDREVAKPAPGDLIAICTTGAYGAVLSSTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    + + +         +Y +   
Sbjct: 385 SRLLIPEVLVDGERYHVVRPRRTYEELLA 413


>gi|126730019|ref|ZP_01745831.1| diaminopimelate decarboxylase [Sagittula stellata E-37]
 gi|126709399|gb|EBA08453.1| diaminopimelate decarboxylase [Sagittula stellata E-37]
          Length = 426

 Score =  230 bits (585), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 59/390 (15%), Positives = 118/390 (30%), Gaps = 26/390 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TP+YL     L+ +              +  A+K  +   +   L     G    S  
Sbjct: 30  VETPFYLYSHATLVRHFRLFDEALAWGPHMVCYAVKAASNQAILTALAAEGAGMDVVSGG 89

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E          G    ++   K       A+          +  ++    + A  +    
Sbjct: 90  EYARAKAAGVPGARIVFSGVGKTRSEIRAALDGGIRQFNVESEPEMQVISEVATSMGVVA 149

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            I +R+NP V           +  ++ G       E   +        V G+  H   + 
Sbjct: 150 PIAVRVNPDVDAKTHAKIATGKSENKFGIPIARAREVYAEAAALPGLKVVGIDVHIGSQL 209

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221
                F    + + +           IE + LGGG+               D+   ++  
Sbjct: 210 TQLEPFEMAYRKVAELTEVLRAEGHAIERLDLGGGLGIPYARSNEAPPLPTDYGAMVQRT 269

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280
                V++ +EPG  I  N   L + V+ +     ++ +I+D+++   +   +       
Sbjct: 270 VGHLGVEVEIEPGRLIAGNAGILVSRVIYVKNGEGRDFLILDAAMNDLIRPAMYDAYHDI 329

Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +               V G  C  GD F +     P+  GD ++F     Y     + +N
Sbjct: 330 VPVAEAEPGIEQVAYDVVGPVCETGDTFAKGRVMPPLAAGDLVAFRSAGAYGAVMSSEYN 389

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              +    +   D         S++D  N 
Sbjct: 390 TRPLVPEIMAKNDQFAVIRARPSFDDMINR 419


>gi|52426139|ref|YP_089276.1| LysA protein [Mannheimia succiniciproducens MBEL55E]
 gi|52308191|gb|AAU38691.1| LysA protein [Mannheimia succiniciproducens MBEL55E]
          Length = 416

 Score =  230 bits (585), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 65/378 (17%), Positives = 123/378 (32%), Gaps = 25/378 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K      +   + +   G    S  E
Sbjct: 26  GTPLYIYSRATLERHWKAFDSALGDHPHLVCFAVKSNPNIAILQVMAKLGAGFDIVSQGE 85

Query: 63  V-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQK--LHKK 117
           +  +           ++   K+ +  A     D       ++++L +  + A K      
Sbjct: 86  LERVIAAGGDPHKVVFSGVAKNEKEIARALELDIRCFNVESLAELQRINEVAGKSGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNC--- 167
           I LR+NP V              ++ G    +  E            V G+  H      
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVDEAREVYRLASRLPNIKVTGMDCHIGSQLT 205

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
           E + FL  +  L  + ++      ++E + LGGG+  T       +P +     L +  +
Sbjct: 206 EIQPFLDATDRLILLLEQLREDGIELEHLDLGGGLGVTYSDETPPHPSEYATALLNKLKQ 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIY 282
             +++I +EPG AI  N+  L T V  +  N  +   IVD+ +   +   L       I 
Sbjct: 266 YTNLEIIMEPGRAISANSGILVTKVEYLKSNETHNFAIVDAGMNDMIRPALYQAYMNIIE 325

Query: 283 P----NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
                N       V G  C   D  G+      +  GD +       Y  +  + +N   
Sbjct: 326 ADRTLNRESKIYDVVGPICETSDFLGKQRRLA-IAPGDYLVQRSAGAYGASMSSTYNSRP 384

Query: 339 MPTIAVKNVDGTIKAIRE 356
           +    + +        R 
Sbjct: 385 LTAEVMVDGSQAHLIRRR 402


>gi|169831365|ref|YP_001717347.1| diaminopimelate decarboxylase [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169638209|gb|ACA59715.1| diaminopimelate decarboxylase [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 440

 Score =  230 bits (585), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 65/399 (16%), Positives = 121/399 (30%), Gaps = 36/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+     N           G  +L A K      +   + +   G    S  E
Sbjct: 30  GTPLYVLDEALFRENCRLYRVAFARGGGGVLYAGKALLTLAVCRLVEEEGLGLDVVSGGE 89

Query: 63  VMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       F  +   ++   K  D    A+ +     + ++  +L+     A +L     
Sbjct: 90  LYTAVQAGFPMDRVYFHGNNKTADEVRMALSAGVHRFVCDSFDELDLLSRLALELGKECN 149

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
           + LR+ P +           +  S+ G         E  +  +E     + GL  H   +
Sbjct: 150 LLLRLTPGIEAHTHDYIRTGQIDSKFGLAIPNGQALEAVRRCLERPALKLRGLHCHIGSQ 209

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 +      +++   +        IE + LGGG+             + L E    
Sbjct: 210 IFELEPYADAARILMEFARQVRDVTGWVIEELDLGGGLGIYYSPGDDPPAVETLAETIFG 269

Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271
                         ++ +EPG +I     T   TV  + E       V     +  +   
Sbjct: 270 AVAQAAASEGLPIPKVLVEPGRSIAGPAGTTLYTVGTVKEIPGVRTYVAVDGGMGDNPRP 329

Query: 272 YLLYQESATIYPNTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
            L          N            + GR C +GD+        PV++GD ++      Y
Sbjct: 330 ALYGARYEACLANRMNGRLDTLAVSLAGRCCESGDLLIRQADLPPVRVGDVVAVSCTGAY 389

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
             +  + +N    P + +         +R  SY D   N
Sbjct: 390 TYSMASNYNRFPRPAMVLVRDGSAELIVRRESYADLIRN 428


>gi|257453688|ref|ZP_05618975.1| diaminopimelate decarboxylase [Enhydrobacter aerosaccus SK60]
 gi|257448922|gb|EEV23878.1| diaminopimelate decarboxylase [Enhydrobacter aerosaccus SK60]
          Length = 435

 Score =  230 bits (585), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 69/386 (17%), Positives = 122/386 (31%), Gaps = 24/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +Q +L               ++  A+K  +   + + L +   G    +  E
Sbjct: 46  GTPTYVYSQQAILAAYKAYDDSFAEIEHQICYAVKANSNLAVLNALAKAGAGFDIVTGGE 105

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKK-- 117
           +          +   ++   K  E    A+          + ++L +    A KL ++  
Sbjct: 106 LARVLAAGGDPKKIVFSGLGKTAEDIRSALEVGIACFNVESEAELYRINAVAGKLQQQAP 165

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP+V              ++ G   +D               V G+  H   +  
Sbjct: 166 ISLRVNPNVDAQTHPYISTGLKENKFGITHEDAPRIYQIAHDLPHLKVVGIDCHIGSQLT 225

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYP---VKDFCQRLKEFSEK 224
               F   L     +          +E I LGGG+     D     ++ F Q L    + 
Sbjct: 226 QVQPFMDALDKVIEMIHALAKQGIALEHIDLGGGLGVQYIDEDVASIQQFAQLLLPKLKT 285

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + +YLEPG +IV N   L T V +      KN  IVD+++   +   L   E A I  
Sbjct: 286 LGLTLYLEPGRSIVANAGVLLTRVDILKPTEHKNFAIVDAAMNDLIRPALYQSEMAVIPT 345

Query: 284 N----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                  P    + G  C  GD   +      +   D ++      Y     + +N    
Sbjct: 346 QLNSPVEPKVWDIVGAICETGDFLAKNRVLA-LADNDILAITGAGAYGFVMSSNYNSRPR 404

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365
               +             +    + N
Sbjct: 405 ACEVLVKDGHAHVIRERETVESLWQN 430


>gi|209693748|ref|YP_002261676.1| diaminopimelate decarboxylase [Aliivibrio salmonicida LFI1238]
 gi|208007699|emb|CAQ77810.1| diaminopimelate decarboxylase [Aliivibrio salmonicida LFI1238]
          Length = 417

 Score =  229 bits (584), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 57/378 (15%), Positives = 114/378 (30%), Gaps = 24/378 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  + +            +  A+K  +  G+ + L     G    S  E
Sbjct: 27  GTPLYVYSRATLERHWNAFDSSVGEQPHLVCYAVKANSNIGVLNALACLGSGFDIVSQGE 86

Query: 63  V-MLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +  +           ++   K       A+  N       +  +L +    A+++     
Sbjct: 87  LERVVAAGGDPTKVVFSGVGKTAKEMRRALELNIKCFNVESEPELERLNAVAEEMGVIAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCE-- 168
           I LRINP V              ++ G       E           N+ G+  H   +  
Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAPEVYKFAQTLPNLNIQGIDCHIGSQLT 206

Query: 169 -NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F+  +  L  +  +       I  + +GGG+           P +     L   + 
Sbjct: 207 DITPFIDATDRLLALIDDLKAQGVNIRHLDVGGGLGVVYRDELPPQPSEYATALLSRLTG 266

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---A 279
           +  +++  EPG AI  N   L T V  +         I+D+++   +   L         
Sbjct: 267 REDLELIFEPGRAIAANAGILVTKVEFLKHTEHKNFAIIDAAMNDLMRPALYQAWQDIVP 326

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            +       +  + G  C  GD  G+      ++  D ++      Y     + +N    
Sbjct: 327 VVPREGEAQSYDLVGPICETGDFLGKDRDLV-LEANDLLAVRSSGAYGFVMSSNYNTRTR 385

Query: 340 PTIAVKNVDGTIKAIREF 357
               + + D      +  
Sbjct: 386 AAEIMVDGDQVHLVRKRE 403


>gi|256370385|ref|YP_003107896.1| diaminopimelate decarboxylase [Brucella microti CCM 4915]
 gi|256000548|gb|ACU48947.1| diaminopimelate decarboxylase [Brucella microti CCM 4915]
          Length = 421

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 64/389 (16%), Positives = 118/389 (30%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+  +  +  +         +    +  ALK  +   +   L +   G  + S  
Sbjct: 25  VGTPFYVYSRATIERHFRVFHDAFADMDTLVTYALKANSNQAVLTALAKLGAGADTVSHG 84

Query: 62  EVMLGHE-KFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHK 116
           E+              ++   K       A+ +        +  +L     +  A     
Sbjct: 85  EIRRALAAGIPANRIVFSGVGKTPREMDFALEAGIYCFNVESEPELEILSARAVAAGKVA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            + LRINP V           +  ++ G        +  +       NV G+  H   + 
Sbjct: 145 PVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARAAYARAASLPGLNVVGIDMHIGSQI 204

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221
                F      +    KE       I  + +GGG+            P   + Q + + 
Sbjct: 205 IDLEPFDNAFALMAELVKELQADGHNIRHVDVGGGLGIPYRTDNTPPPPPVAYAQIVAKH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278
            +   ++   EPG  IV N   L T V+ + E + KN VIVD+++   +   L       
Sbjct: 265 IKPLGLKTVFEPGRLIVGNAGLLVTEVIFVKEGDAKNFVIVDAAMNDLIRPTLYDAFHDI 324

Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                   N     A   G  C  GD  G          GD I+      Y     + +N
Sbjct: 325 RPVIMPNDNAPRIRADFVGPVCETGDYLGLDREVAKPAPGDLIAICTTGAYGAVLSSTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    + + +         +Y +   
Sbjct: 385 SRLLIPEVLVDGERYHVVRPRRTYEELLA 413


>gi|257459021|ref|ZP_05624140.1| diaminopimelate decarboxylase [Campylobacter gracilis RM3268]
 gi|257443406|gb|EEV18530.1| diaminopimelate decarboxylase [Campylobacter gracilis RM3268]
          Length = 437

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 64/421 (15%), Positives = 123/421 (29%), Gaps = 59/421 (14%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D  ++  N      +       +  A+K  +   +   L+    G    S+ E
Sbjct: 11  GTPLYVYDFNEIQKNFIALKEVFAARKSLVCFAIKANSNLSVLKFLSDLGSGFDCVSIGE 70

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++   K           D   I   + +++ + +  AQKL+K   
Sbjct: 71  LRRALYVGAKSYKIIFSGVGKQDGELEFALKSDILLINLESEAEMLRLERIAQKLNKPAR 130

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCE-- 168
             +R+NP+V              ++ G   +   +  I        N  G+ FH   +  
Sbjct: 131 ISIRVNPNVDAKTHPYISTGLNENKFGVNIETARKMYIYAKKSKFLNPVGIHFHIGSQLT 190

Query: 169 -NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224
                   + ++ ++ +E       I++  +GGGI    +D       D+ Q + +    
Sbjct: 191 DISPICDAAKIVSDLLRELRALEIDIKFFDVGGGIGIRYEDEKQIVLYDYAQGILKSLSG 250

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             V I  EPG  I        T VL       K  VIVD ++   +   L     A    
Sbjct: 251 LDVTIVCEPGRFIAGAAGVFLTRVLYEKQNCGKRFVIVDGAMNDLIRPSLYGAHHAIEII 310

Query: 284 NTGP----------------------------------------YTAMVCGRSCLAGDIF 303
                                                           V G  C +GD  
Sbjct: 311 GASEGINLNEPDASEVNLGSRGEDQTSGSDADQKNLGGVNLAETSLCDVVGPICESGDFL 370

Query: 304 GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
            +      ++ GD ++ +    Y  +  + +N                   +  S+++  
Sbjct: 371 AKGVSLPSLQSGDLLAIKSAGAYGFSMSSNYNTRCRAAEVAVYDGQDRLIRKRESFDELI 430

Query: 364 N 364
            
Sbjct: 431 A 431


>gi|325123129|gb|ADY82652.1| diaminopimelate decarboxylase [Acinetobacter calcoaceticus PHEA-2]
          Length = 415

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 65/389 (16%), Positives = 123/389 (31%), Gaps = 27/389 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  K     N             ++  A+K  +   + + L +   G    S  E
Sbjct: 25  GTPLYVYSKAAFEKNYLDMDRAFDFIDHQICFAVKSNSNIAVLNVLAKLG-GFDIVSGGE 83

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++   K      +  N         + ++L++ +  A +L     
Sbjct: 84  LARVLKAGGDASKVVFSGLGKTEADIEISLNVGIACFNVESYAELDRLQKVAARLGKKAP 143

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNC--- 167
           I LR+NP V              ++ G                    + G+  H      
Sbjct: 144 ISLRVNPDVDAKTHPYISTGLKENKFGIPSDTVYETYQYAASLPNLEIIGIDCHIGSQLT 203

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224
           E K F+     +  + +E       ++ I +GGG+    KD       ++   +K   EK
Sbjct: 204 ETKPFVDALDRVMLMIEELKKLGITLKHIDIGGGLGVCYKDETPPSVEEYANSMKPALEK 263

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQES----A 279
             +++Y+EPG +I  N   L T V L    + +N  I+D+++   +   L          
Sbjct: 264 LGLKVYMEPGRSISANAGVLLTKVDLLKPTSHRNFAIIDAAMNDLIRPALYEAWMDIQPV 323

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
               +T   T  + G  C  GD  G+      +K  D ++      Y     + +N    
Sbjct: 324 VPSSDTEEKTWDLVGAICETGDFIGKDRSLA-LKENDLLAVLGAGAYGFVMSSNYNTRGR 382

Query: 340 PTIAVKNVDGTIKAIREFSYNDY--YNNL 366
               + + D         +         L
Sbjct: 383 AAEVMVSGDKAHLIRERETVESLWEKERL 411


>gi|312622915|ref|YP_004024528.1| diaminopimelate decarboxylase [Caldicellulosiruptor kronotskyensis
           2002]
 gi|312203382|gb|ADQ46709.1| diaminopimelate decarboxylase [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 433

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 61/402 (15%), Positives = 124/402 (30%), Gaps = 37/402 (9%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKN---AGVKLLLALKCFAAWGMFDTLNQYMDGTTS 57
           M  TP Y++++  +  N++               ++ A K F    M     +   G   
Sbjct: 28  MYGTPLYVMNETMIRENINIFKSSLNKYFGENGLIIYASKAFCTKAMCQIAKEEGIGLDV 87

Query: 58  SSLYEVMLGHEK-FGGETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDKAQKLH 115
            S  E+       F  +   ++   K  +   + +     I+ +   +L       +  +
Sbjct: 88  VSGGELYTALSVNFDPDKIFFHGNNKTYDELEMAVEKGVKIVLDNFDELEMLSLICRTKN 147

Query: 116 K--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFH 164
           K   + +RI P +           +  S+ G   ++          ++ E  N+ GL  H
Sbjct: 148 KKADVLIRIKPGIEAHTHEFIRTGQIDSKFGVALENGEAFSIVQKVLQKEELNLVGLHCH 207

Query: 165 NNCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
              +      F      ML+ + K       +I+ + LGGG       +      ++  E
Sbjct: 208 IGSQIFETAPFKLAARVMLEFMLKIKNELGYEIKILDLGGGFGIKYTAHDEPPRVEKFIE 267

Query: 221 FSEK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI------VDS 263
              +               I LEPG +IV        T+ ++ E             +  
Sbjct: 268 VITEEVEEFCSLKGLKKPFIVLEPGRSIVGEAGITLYTIGNVKEIPNVRNYVSVDGGMTD 327

Query: 264 SVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323
           +    +                      + GR C +GDI  +      +K G  ++    
Sbjct: 328 NPRYALYQARYDAYVVENPLGQRTKVYTIAGRCCESGDILIKDIKLPELKTGQHLAILAT 387

Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
             YN +  + +N    P + +         ++  +Y D   N
Sbjct: 388 GAYNYSMSSNYNRFPRPAVVLLKNGQARVIVKRETYEDLVRN 429


>gi|254292613|ref|YP_003058636.1| diaminopimelate decarboxylase [Hirschia baltica ATCC 49814]
 gi|254041144|gb|ACT57939.1| diaminopimelate decarboxylase [Hirschia baltica ATCC 49814]
          Length = 421

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 63/388 (16%), Positives = 117/388 (30%), Gaps = 25/388 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+     L  + +      + +   +  ++K     G+  TL +   G    S  
Sbjct: 25  VGTPTYVYSTATLERHYNVLAEAFEGSKYLIAYSVKACGNIGVIATLAKLGAGADVVSGG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116
           E+          E   ++   K         N         +  ++ +  + A  L K  
Sbjct: 85  ELAKALHAGIPAEKIVFSGVGKTHAELTAALNAGIHQFNVESFPEMERLNEIAIGLGKVA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCEN 169
            I  R+NP V               + G    +  +        E  N  G+  H   + 
Sbjct: 145 PIAFRVNPHVDAGGHANISTGGAEHKFGIAWHEAADMYAKAAAMEGINPIGVDVHIGSQI 204

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKD----FCQRLKEFS 222
                     + +    +E      +I+ + LGGG+          D    + Q ++E  
Sbjct: 205 MDIEPMRIAFEKVVALVRELRAQGIEIKRMDLGGGLGIPYAPEDNPDSPAKYAQMIREVK 264

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATI 281
           +   V++ LEPG  I  N   +   V  + E      ++ D+ +       L        
Sbjct: 265 QGVDVELILEPGRMIAGNAGVMLANVEYVKERDGRTFVILDAGMNDLARPALYDSIHEVQ 324

Query: 282 YPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                          + G  C   D F +     P+K  D+I+F     Y     + +N 
Sbjct: 325 PLIEPASDAPIAPVDLVGPVCETTDRFQKARPMHPLKQDDKIAFMSAGAYGAVLSSQYNA 384

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +    + N D         SY+D   
Sbjct: 385 RPLAAEVLVNGDSFSVIRPRPSYDDIIA 412


>gi|323497704|ref|ZP_08102719.1| carboxynorspermidine decarboxylase [Vibrio sinaloensis DSM 21326]
 gi|323317180|gb|EGA70176.1| carboxynorspermidine decarboxylase [Vibrio sinaloensis DSM 21326]
          Length = 379

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 170/368 (46%), Positives = 244/368 (66%), Gaps = 3/368 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPY++I++ KL+ NL+ A  +++ +GVKL+LALKCF+ WG+FD +  Y+DGTTSS  +
Sbjct: 8   LKTPYFMINEDKLIENLEKAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPF 67

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LGHE FGGETHAY+V Y + ++  V   CD +IFN+ SQL  ++   +     IGLR
Sbjct: 68  EVKLGHETFGGETHAYSVGYSEDDVREVADICDKMIFNSQSQLAAYRHIIEGKA-SIGLR 126

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP VSY+   LA+P R FSRLG +           ++G+MFH NCENK    F  +L +
Sbjct: 127 LNPGVSYAGQDLANPARQFSRLGVQADHIDAEVFDEIDGVMFHMNCENKDVDAFIGLLDS 186

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I ++FG ++ +++W+S+GGG+ FT   Y ++     LK FSEK+ VQ+YLEPGEAI+T T
Sbjct: 187 ISEQFGEYLDKLDWVSMGGGVFFTWPGYDIEKLGLALKAFSEKHGVQMYLEPGEAIITKT 246

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299
           T L  TV+D+ EN+K   IVDS+ EAH  D L+Y E A+I      G +  ++   SCLA
Sbjct: 247 TDLVVTVVDVVENVKKTAIVDSATEAHRLDTLIYDEPASILEASEEGEHEYVIGSCSCLA 306

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F E  FE+P+KIG R+   D AGY + + NWFNG+ MP++  +  +G I+ + EF Y
Sbjct: 307 GDQFCEAKFEQPIKIGQRLHILDSAGYTMVKLNWFNGLRMPSVYCERSNGEIQKLNEFDY 366

Query: 360 NDYYNNLS 367
           +D+  +LS
Sbjct: 367 SDFKRSLS 374


>gi|148244272|ref|YP_001218966.1| diaminopimelate decarboxylase [Candidatus Vesicomyosocius okutanii
           HA]
 gi|146326099|dbj|BAF61242.1| diaminopimelate decarboxylase [Candidatus Vesicomyosocius okutanii
           HA]
          Length = 413

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 57/384 (14%), Positives = 111/384 (28%), Gaps = 22/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+  +  +  N     +        +  A+K  +   +   L +   G    S  E
Sbjct: 25  GSPLYVYSRTDIEYNWHLFSHAFGIHPHLVCYAVKANSNLAVLSVLAKIGSGFDVVSNGE 84

Query: 63  VMLG-HEKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +              ++   K       A+          +++++ + +  A    +   
Sbjct: 85  LERILLAGADASRCVFSGVAKTNIEIKRALEVGIFCFNVESMAEMIRIEQVAKEMSMQAP 144

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G    D I        S    V G+  H   +  
Sbjct: 145 ISLRVNPDVDAKTHPYISTGLKENKFGVDIDDAIPIYKMAYNSPYLKVKGIDCHIGSQLT 204

Query: 171 SFLCFSAMLKNIEKEFGHFI---TQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
               F   L  + +           +  + LGGG+     +    D    +    +K   
Sbjct: 205 KISPFLDALDKVLELVAKLGKLNIHVTHLDLGGGVGIKYDNEQTIDINAYISSILDKVGS 264

Query: 228 -QIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIYPNT 285
            +I LEPG AIV N     T V  + +N      I+D ++   +           +  + 
Sbjct: 265 LKIILEPGRAIVGNAGIFVTKVEFLKQNSDKSFAIIDGAMNDLLRPSFYQAYHQVLPIDE 324

Query: 286 GPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                     + G  C  GD   +      +  GD ++      Y     + +N      
Sbjct: 325 NAEGIDAHWDLVGPICETGDFLAKNRRLS-LSEGDYLALMSAGAYGSTMSSNYNSRPRVA 383

Query: 342 IAVKNVDGTIKAIREFSYNDYYNN 365
             +             +  D +N 
Sbjct: 384 EVMVLGSQYTLVRERETIQDLFNK 407


>gi|219871605|ref|YP_002475980.1| diaminopimelate decarboxylase [Haemophilus parasuis SH0165]
 gi|219691809|gb|ACL33032.1| diaminopimelate decarboxylase [Haemophilus parasuis SH0165]
          Length = 419

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 68/386 (17%), Positives = 121/386 (31%), Gaps = 25/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  +   + + + +   G    S  E
Sbjct: 26  GTPAYIYSRATLERHWHAFDKAFGDHPHLICFAVKSNSNLALLNVMARLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +              ++   K     A             +VS+L +  + A +L K   
Sbjct: 86  LERVLAAGGDASKVVFSGVAKTHREIARALEVGIRCFNVESVSELKRINEVAGQLGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G   K+  E            + G+  H   +  
Sbjct: 146 ISLRVNPDVDAKTHPYISTGLKENKFGVSVKEAREVYRFATTLPHVKITGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F      +    ++      ++  + LGGG+  T       +P++     L +   
Sbjct: 206 ELQPFLDATDRVIVLMEQLKQDGIELHHLDLGGGLGVTYTDETPPHPMEYAAALLNKLRA 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIY 282
             +++I LEPG AI  N   L T V  I +N      IVD+ +   +   L       I 
Sbjct: 266 YPNLEIILEPGRAITANAGILVTKVEYIKQNEDRRFAIVDTGMNDMIRPALYEAYMQIIE 325

Query: 283 PNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            N           V G  C   D  G+      +  GD I+      Y     + +N   
Sbjct: 326 VNQSLVREKAIYDVVGPICETSDFLGKQRELA-IAEGDLIAMRSAGAYGATMSSTYNSRP 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364
                + + D         S+ D + 
Sbjct: 385 QAIEVMVDGDKAHLIKARASFEDLWR 410


>gi|125973201|ref|YP_001037111.1| diaminopimelate decarboxylase [Clostridium thermocellum ATCC 27405]
 gi|256004005|ref|ZP_05428991.1| diaminopimelate decarboxylase [Clostridium thermocellum DSM 2360]
 gi|281417400|ref|ZP_06248420.1| diaminopimelate decarboxylase [Clostridium thermocellum JW20]
 gi|125713426|gb|ABN51918.1| diaminopimelate decarboxylase [Clostridium thermocellum ATCC 27405]
 gi|255992133|gb|EEU02229.1| diaminopimelate decarboxylase [Clostridium thermocellum DSM 2360]
 gi|281408802|gb|EFB39060.1| diaminopimelate decarboxylase [Clostridium thermocellum JW20]
 gi|316940568|gb|ADU74602.1| diaminopimelate decarboxylase [Clostridium thermocellum DSM 1313]
          Length = 437

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 65/401 (16%), Positives = 122/401 (30%), Gaps = 38/401 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP Y++D+  +  N                 +L A K F    M   + Q   G    S
Sbjct: 30  GTPLYVMDESLIRENCRIYKNALDKYYNGNGLVLYASKAFCTMAMCKIVQQEGLGLDVVS 89

Query: 60  LYEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
             E+       F  E   ++   K  D    A+ +N   I+ +   +L      A +  K
Sbjct: 90  GGELYTAIKAGFPMEKVYFHGNNKTIDELELAIDNNVRRIVVDNRQELLHVNRIAAEKGK 149

Query: 117 KIGL--RINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHN 165
            + +  RI P +           +  S+ G   +         + ++     V GL  H 
Sbjct: 150 TVNISFRIKPGIDAHTHDFIRTGQIDSKFGVALENGEAMEIIGEAVKLSNVKVVGLHCHI 209

Query: 166 NCENKSFLCFSAMLKNIEKEFGHFITQIEWI----SLGGGIHFTDKDYPVKDF------- 214
             +      F    + +         ++       +LGGG                    
Sbjct: 210 GSQIFELAPFEEAARVMLTFIAKIKEELGIEIEELNLGGGFGIKYTQDDDPIEYDRYIKS 269

Query: 215 -CQRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268
             + +K   E        I +EPG +IV +       +  I +       +     +  +
Sbjct: 270 VSEVVKSVCEDKGIKLPFIVIEPGRSIVASAGITLYRIGTIKDIKGVRKYIAVDGGMTDN 329

Query: 269 VPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
               L   +   +  N           + G+ C +GD+ G+       + GD ++     
Sbjct: 330 PRYALYQSKYEGVIANKADAAKTEKVTIAGKCCESGDLLGKDVLLPEAEEGDILAILATG 389

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            YN +  + +N I  P + +         ++   YND   N
Sbjct: 390 AYNYSMSSNYNRIPRPAVVLVKDGKARVIVKREDYNDIIRN 430


>gi|75674910|ref|YP_317331.1| diaminopimelate decarboxylase [Nitrobacter winogradskyi Nb-255]
 gi|74419780|gb|ABA03979.1| diaminopimelate decarboxylase [Nitrobacter winogradskyi Nb-255]
          Length = 421

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 55/389 (14%), Positives = 110/389 (28%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +              +  A+K  +   +  T+ +   G    S  
Sbjct: 25  VGTPFYCYSTATLERHYRVFAEAFAGTDHLICYAVKANSNQSVLRTMARLGAGADVVSGG 84

Query: 62  EVMLGHEK-FGGETHAYNV-AYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKI 118
           E+              ++     + E+ A L+     I   +  +L+     A +  +  
Sbjct: 85  ELKRALAANIPASKILFSGVGKTESELRAALAADVLCINVESEPELDLLSRVAVETGRTA 144

Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            +  R+NP V           R  ++ G           +        V G   H   + 
Sbjct: 145 RISVRVNPDVDSGTHAKISTGRLENKFGIPITQARAVYARAAKLPGIKVTGADMHIGSQI 204

Query: 170 KSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEF 221
                     + +             I  +  GGG+     +          + + ++  
Sbjct: 205 TDLGPMETAFRLLADFVGTLRADGHVISHVDFGGGLGIPYYEDRSAPPEPLAYAEMVRRV 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
           +      +  EPG  IV N   L T V+ +   N +N VI+D+++   +   L       
Sbjct: 265 TRDLDCTLMFEPGRMIVGNAGVLVTRVIYVKHGNARNFVIIDAAMNDLIRPTLYEAYHQI 324

Query: 281 IYPNTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +     P       A V G  C  GD           + GD ++      Y   +   +N
Sbjct: 325 MPVRAAPRDAAVMVADVVGPVCETGDYLALGRNLPEPQAGDLLAIMTAGAYGAVQSGTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    +   +           +    
Sbjct: 385 TRALVPEVLVRGNQYATVRPRIEVDQLIA 413


>gi|312128102|ref|YP_003992976.1| diaminopimelate decarboxylase [Caldicellulosiruptor hydrothermalis
           108]
 gi|311778121|gb|ADQ07607.1| diaminopimelate decarboxylase [Caldicellulosiruptor hydrothermalis
           108]
          Length = 433

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 60/402 (14%), Positives = 125/402 (31%), Gaps = 37/402 (9%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKN---AGVKLLLALKCFAAWGMFDTLNQYMDGTTS 57
           M  TP Y++++  +  N++      +        ++ A K F    M     +   G   
Sbjct: 28  MYGTPLYVMNETMIRENINRFKSSLQKYFGENGLIIYASKAFCTKAMCKIAKEEGIGLDV 87

Query: 58  SSLYEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLH 115
            S  E+       F  +   ++   K  +   +  +    I+ +   +L       +  +
Sbjct: 88  VSGGELYTALSVNFDPDKIFFHGNNKTYDELEMAVDRGVKIVLDNFDELEMLSLICKTKN 147

Query: 116 K--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFH 164
           K   + +RI P +           +  S+ G   ++          ++ +  ++ GL  H
Sbjct: 148 KKADVLIRIKPGIEAHTHEFIRTGQIDSKFGVALENGEAFSMVQKVLQRQELSLVGLHCH 207

Query: 165 NNCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
              +      F      ML+ + K       +IE + LGGG       +      ++  E
Sbjct: 208 IGSQIFETAPFKLAARVMLEFMLKIKNELGYEIEMLDLGGGFGIKYTAHDEPPRIEKFIE 267

Query: 221 FSEK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI------VDS 263
              +               I LEPG +IV        T+  + E             +  
Sbjct: 268 AIAEEVEEFCSLRGLKKPFIVLEPGRSIVGEAGITLYTIGSVKEIPNVRNYASVDGGMTD 327

Query: 264 SVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323
           +    +                      + GR C +GDI  +      +K G  ++    
Sbjct: 328 NPRYALYQARYDAYVVENPLGQRTKVYTIAGRCCESGDILIKDIKLPELKTGQHLAILAT 387

Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
             YN +  + +N    P + +     +   ++  +Y D   N
Sbjct: 388 GAYNYSMSSNYNRFPRPAVVLLKNGQSRVIVKRETYEDLVRN 429


>gi|294501127|ref|YP_003564827.1| diaminopimelate decarboxylase [Bacillus megaterium QM B1551]
 gi|294351064|gb|ADE71393.1| diaminopimelate decarboxylase [Bacillus megaterium QM B1551]
          Length = 439

 Score =  229 bits (583), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 55/400 (13%), Positives = 127/400 (31%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   +           +  GVK  +  A K F+   M   +++        S 
Sbjct: 30  GTPLYVYDVALIRQRARGFKETFEKHGVKAQVAYASKAFSTIAMVQVVHEEGLSLDVVSG 89

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKA--QKLH 115
            E+       F  E   ++   K      +    D   I+ +   ++   ++     +  
Sbjct: 90  GELYTALAADFPKERIHFHGNNKSRAELEMAIKEDVGCIVVDNFYEIALLQEITEQYQKK 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             + LR+ P +           +  S+ G         E  +    S+   + G+  H  
Sbjct: 150 MPVLLRLTPGIEAHTHDYILTGQEDSKFGFDLQNGQADEAVRLVQNSKGLELLGIHCHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWI----SLGGGIHFTDKDYPVKDF-------- 214
            +      F    + +  +   +  +IE++    +LGGG      +              
Sbjct: 210 SQIFETTGFIMATQKLFAKMKEWKQRIEFVPQVLNLGGGFGIRYTEEDQPIPVSQYVEVI 269

Query: 215 CQRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269
            + +K+ S++      +I++EPG ++V +  T   ++              +D  +  ++
Sbjct: 270 IEEVKKQSKQLEVEIPEIWIEPGRSLVGDAGTTLYSIGSRKHVPNVREYVAIDGGMNDNI 329

Query: 270 PDYLLYQESATI----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   +      +       + G+ C +GD+             D ++      
Sbjct: 330 RPALYQAKYEAVIANRMNDESDELVSIAGKCCESGDMLMWDVHLPKANPDDLLAMFCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  + +N +  P +           ++  +Y D   N
Sbjct: 390 YGYSMASHYNRLPKPAVVFVEDGEAQLVVKRETYEDIVKN 429


>gi|224438189|ref|ZP_03659124.1| carboxynorspermidine decarboxylase NspC [Helicobacter cinaedi CCUG
           18818]
 gi|313144634|ref|ZP_07806827.1| carboxynorspermidine decarboxylase NspC [Helicobacter cinaedi CCUG
           18818]
 gi|313129665|gb|EFR47282.1| carboxynorspermidine decarboxylase NspC [Helicobacter cinaedi CCUG
           18818]
          Length = 418

 Score =  229 bits (583), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 133/409 (32%), Positives = 210/409 (51%), Gaps = 46/409 (11%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y++++++L +NL     I+K +G K+LLALK +A W  FDTL   + G+T+S LY
Sbjct: 10  IPTPAYVLEEERLNHNLKILESIQKQSGAKILLALKGYAFWRRFDTLKHTLSGSTASGLY 69

Query: 62  EVMLGHEKFGG-----------------ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL 104
           E  LG+E+ GG                 E   ++ AYK  E +++L     IIFN+ +Q 
Sbjct: 70  EARLGYEEIGGRANQDKDNTQDSSVQHKEICVFSPAYKASEFESILEYATHIIFNSFNQW 129

Query: 105 NKFKDKAQKLHK----------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE 154
            KFK      ++          ++GLR+N   S  +  + +P  P SRLG    +  +  
Sbjct: 130 QKFKPLIDSKNQTLLTQNLSPIEVGLRVNLLYSEVEPPIYNPCVPLSRLGITPSEFTKGV 189

Query: 155 IK----NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
            +     ++GL FH +CE  S       L + EK FG ++   +W++ GGG H T  DY 
Sbjct: 190 QQYGLQGIDGLHFHTHCEQDSAALSRT-LPHFEKHFGIYLKNKKWVNFGGGHHITRADYD 248

Query: 211 VKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV 269
            +     +K+F ++++  +++LEPGEA+      L   V+DI EN   + I+D S  AH+
Sbjct: 249 CELLINLIKDFKQRHNDIEVFLEPGEAVGWQVGFLIGEVVDIVENQGKVAILDVSAAAHM 308

Query: 270 PDYLLYQESATIYPNTGP-------------YTAMVCGRSCLAGDIFGEFHFEKPVKIGD 316
           PD L      T+   +               YT  + G +CLAGD+ G++ F+ P+ +GD
Sbjct: 309 PDCLEMPYRPTLCKLSKDGNIESDKGINIAQYTYRLGGPTCLAGDVIGDYSFDTPLLVGD 368

Query: 317 RISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           RI FED+  Y I + N FNGI +P + V + +G  + ++ F Y DY   
Sbjct: 369 RIIFEDMLHYTIVKNNTFNGIPLPFLGVIDTNGKFEILKRFDYTDYKQR 417


>gi|73748375|ref|YP_307614.1| diaminopimelate decarboxylase [Dehalococcoides sp. CBDB1]
 gi|73660091|emb|CAI82698.1| diaminopimelate decarboxylase [Dehalococcoides sp. CBDB1]
          Length = 434

 Score =  229 bits (583), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 61/399 (15%), Positives = 122/399 (30%), Gaps = 36/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D+  +  N            A   +  A K F    +   L +        S 
Sbjct: 34  GTPLYIFDELTIRQNCRDFKREFSRRYADSSISYASKAFLHPALLKILAEEGMSLDVVSG 93

Query: 61  YEVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115
            E+ + +   F  +    +   K  +    A+  +   I+ ++  ++      A +    
Sbjct: 94  GELSVANNAGFPMDMVYLHGNNKSAEELRLALRLHVGRIVVDSFDEIKLLSKLADESGHI 153

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCE 168
             I LRI P V           +  S+ G       E+          N+ G  FH   +
Sbjct: 154 PDILLRITPGVDAHTHQHITTGKLDSKFGFPLFQAAEAVGLAMAQASLNLVGFHFHIGSQ 213

Query: 169 NK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRL-- 218
                        +L    +    +   IE + +GGG     +      P+  + + +  
Sbjct: 214 IFETQPFLDAIDLVLDFAAQVQERYGFDIEELDIGGGYGVQYEVDKPAPPISAYAEAIGA 273

Query: 219 -----KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271
                    +     + +EPG AI+        TV  I +     +       +  ++  
Sbjct: 274 KVVSKCRSLKLTPPSLNIEPGRAIIAQAGVALYTVGVIKDIPGIRLYASVDGGMGDNIRP 333

Query: 272 YLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
            L   +   +  N           + G+ C +GDI         ++ GD ++      Y 
Sbjct: 334 ALYEAKYEAVVANNVQSAEKEKVTIAGKFCESGDILIRDIELPSLRTGDILAVPCCGAYC 393

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366
           +   + +NG + P + +          R  +  D  + L
Sbjct: 394 LPMSSNYNGYHRPAVVMLKNGEDRLIRRRETVEDL-SRL 431


>gi|262373159|ref|ZP_06066438.1| diaminopimelate decarboxylase [Acinetobacter junii SH205]
 gi|262313184|gb|EEY94269.1| diaminopimelate decarboxylase [Acinetobacter junii SH205]
          Length = 416

 Score =  229 bits (583), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 62/389 (15%), Positives = 120/389 (30%), Gaps = 26/389 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  K  L  +             ++  A+K  +   + + L +   G    +  E
Sbjct: 25  GTPLYVYSKATLEKHYLDMDRAFDFIDHQICFAVKSNSNLAVLNVLAKLGAGFDIVTGGE 84

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++   K                   + ++L++ +  A KL     
Sbjct: 85  LARVLAAGGNPAKIVFSGLGKSEADIEKALDVGIACFNVESYAELDRIQKVAAKLGKKAP 144

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNC--- 167
           I LR+NP V              ++ G                    + G+  H      
Sbjct: 145 ISLRVNPDVDAKTHPYISTGLKENKFGIPSDTVYETYQYAASLPNLEIVGIDCHIGSQLT 204

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224
           E K F+     +  + +E       ++ I +GGG+    KD       ++   ++   EK
Sbjct: 205 ETKPFVDALDRVVLMIEELKKLGINLKHIDIGGGLGVRYKDETPPTVAEYANAMRPVLEK 264

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++Y+EPG +I  N   L T V L    N +N  I+D+++   +   L          
Sbjct: 265 LGLKVYMEPGRSISANAGALLTKVDLLKPTNHRNFAIIDAAMNDLIRPALYEAWMDIQSV 324

Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                    T  + G  C  GD  G+      ++  D ++      Y     + +N    
Sbjct: 325 APHSDVEVKTWDLVGAICETGDFLGKQRDLA-LQENDVLAVLGAGAYGFVMSSNYNTRGR 383

Query: 340 PTIAVKNVDGTIKAIREFSYNDY--YNNL 366
               + + D         +         L
Sbjct: 384 AAEVMVSGDQAYLIRERETIESLWEKERL 412


>gi|289192693|ref|YP_003458634.1| diaminopimelate decarboxylase [Methanocaldococcus sp. FS406-22]
 gi|288939143|gb|ADC69898.1| diaminopimelate decarboxylase [Methanocaldococcus sp. FS406-22]
          Length = 435

 Score =  229 bits (583), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 71/398 (17%), Positives = 136/398 (34%), Gaps = 35/398 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG------VKLLLALKCFAAWGMFDTLNQYMDGTT 56
            TP Y++ ++++  N +  +   K           +  A K  A   +   L +   G  
Sbjct: 30  GTPLYVMSEEQIKINYNRYVEAFKRYEEETGKEFIVAYAYKANANLAITRLLAKLGCGAD 89

Query: 57  SSSLYEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQK 113
             S  E+ +        +   +N   K  E   +           +++S+L    + A++
Sbjct: 90  VVSGGELYIAKLSGVPSDKIVFNGNCKTKEEIIMGIEAKIRAFNVDSISELILINETAKE 149

Query: 114 LHK--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLM 162
           + +   +  RINP+V              ++ G   +           +E E   V G+ 
Sbjct: 150 IGEIANVAFRINPNVDPKTHPKISTGLKKNKFGLDVESGIAMKAIKMALEMENVKVVGVH 209

Query: 163 FHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFC 215
            H   +      F+  +  + +   E      +IE ++LGGG+        +    KD  
Sbjct: 210 CHIGSQLTDISPFVEETRKVMDFVVELKKEGIEIEDVNLGGGLGIPYYKDKEIPTQKDLA 269

Query: 216 QRLKEFSEKY-----SVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHV 269
             +     +Y        + LEPG ++V     L   V  I E      V++D+ +   +
Sbjct: 270 DAIINTMLQYQDKVEMPNLILEPGRSLVATAGYLLGKVHHIKETPVTKWVMIDAGMNDMM 329

Query: 270 PDYLLYQESATIYPNTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
              +       I            V G  C + D+FG       V++GD ++  DV  Y 
Sbjct: 330 RPAMYEAYHHIINCKVKDEKEVVSVAGGLCESSDVFGRDRELDKVEVGDILAIFDVGAYG 389

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           I+  N +N    P + + +  G        +Y D    
Sbjct: 390 ISMANNYNARGRPRMVLTSKKGVFLIRERETYADLIAK 427


>gi|170761245|ref|YP_001788652.1| diaminopimelate decarboxilase [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169408234|gb|ACA56645.1| diaminopimelate decarboxilase [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 422

 Score =  229 bits (583), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 71/398 (17%), Positives = 130/398 (32%), Gaps = 35/398 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP Y++D+  + +N    +        K+  A K F    M + + +        S  E
Sbjct: 23  KTPLYVMDETLIRDNCKRYVTSFNKGKNKVAYAGKAFLTKAMCNLIKEEGLSLDVVSGGE 82

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSN--CDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +       F  +   ++   K  E   +  N    T + +   +L+K  +  +  + K  
Sbjct: 83  IFTAYRSGFPMDKVYFHGNNKTIEEIEMAINLGVGTFVADNFQELDKINNICKNKNIKQR 142

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168
             LRI P +           +  S+ G    D           + E     G   H   +
Sbjct: 143 VILRIIPGIEAHTHEYIRTGQIDSKFGFTLIDDGAIKAVKKAYKLENIQFVGFHCHIGSQ 202

Query: 169 NK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                        ML+ I++        IE + LGGG     K+       +   +    
Sbjct: 203 IFETKPYEEEIEIMLRLIKRTNEELNIDIEELDLGGGFGIYYKEGDEPKKIEEFCKIILD 262

Query: 225 YSVQI-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271
            +               +EPG +IV N+     +V  I E       +  +  +  ++  
Sbjct: 263 KTRSYSKEIGVKEPILVIEPGRSIVGNSGVTLYSVGSIKEIPNIAKYIAVNGGMTDNIRP 322

Query: 272 YLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
            L   E   +  N           V G+ C +GDI  +      V+  D ++  +   Y 
Sbjct: 323 ALYKSEYECVVCNKALDNLLEEVKVVGKCCESGDILIDNVKLPIVETDDLLAILNTGAYG 382

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            +  + +N   +P++   N D T    R  SY +   N
Sbjct: 383 YSMASNYNKALLPSVVFVNNDKTKLVCRRQSYENLIQN 420


>gi|147669155|ref|YP_001213973.1| diaminopimelate decarboxylase [Dehalococcoides sp. BAV1]
 gi|146270103|gb|ABQ17095.1| diaminopimelate decarboxylase [Dehalococcoides sp. BAV1]
          Length = 434

 Score =  229 bits (583), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 61/399 (15%), Positives = 122/399 (30%), Gaps = 36/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D+  +  N            A   +  A K F    +   L +        S 
Sbjct: 34  GTPLYIFDELTIRQNCRDFKREFSRRYADSSVSYASKAFLHPALLKILAEEGMSLDVVSG 93

Query: 61  YEVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115
            E+ + +   F  +    +   K  +    A+  +   I+ ++  ++      A +    
Sbjct: 94  GELSVANNAGFPMDMVYLHGNNKSAEELRLALRLHVGRIVVDSFDEIKLLSKLADESGHI 153

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCE 168
             I LRI P V           +  S+ G       E+          N+ G  FH   +
Sbjct: 154 PDILLRITPGVDAHTHHYITTGKLDSKFGFPLFQAAEAVGLAMAQASLNLVGFHFHIGSQ 213

Query: 169 NK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRL-- 218
                        +L    +    +   IE + +GGG     +      P+  + + +  
Sbjct: 214 IFETQPFLDAIDLVLDFAAQVQERYGFDIEELDIGGGYGVQYEVDKPAPPISAYAEAIGA 273

Query: 219 -----KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271
                    +     + +EPG AI+        TV  I +     +       +  ++  
Sbjct: 274 KVVSKCRSLKLTPPSLNIEPGRAIIAQAGVALYTVGVIKDIPGIRLYASVDGGMGDNIRP 333

Query: 272 YLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
            L   +   +  N           + G+ C +GDI         ++ GD ++      Y 
Sbjct: 334 ALYEAKYEAVVANNVQSAEKEKVTIAGKFCESGDILIRDIELPSLRTGDILAVPCCGAYC 393

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366
           +   + +NG + P + +          R  +  D  + L
Sbjct: 394 LPMSSNYNGYHRPAVVMLKNGEDRLIRRRETVEDL-SRL 431


>gi|303241562|ref|ZP_07328062.1| diaminopimelate decarboxylase [Acetivibrio cellulolyticus CD2]
 gi|302590880|gb|EFL60628.1| diaminopimelate decarboxylase [Acetivibrio cellulolyticus CD2]
          Length = 437

 Score =  229 bits (583), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 63/401 (15%), Positives = 127/401 (31%), Gaps = 38/401 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP Y++D+  +  N                 +L A K  +   +   + Q   G    S
Sbjct: 30  GTPVYVLDESLIRENCRLYKNAMDKYYDGNGMVLYASKALSTMAVCKIVEQEGLGLDVVS 89

Query: 60  LYEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
             E+          +   ++      +    A+ +N   I+ +   +L +  D A K  K
Sbjct: 90  GGELYTAMKAGVPMDRIYFHGNNKTCEELELAISNNIRRIVVDNREELKRVNDIASKQGK 149

Query: 117 KIGL--RINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHN 165
            + +  RI P +           +  S+ G   +         +  + +   V G+  H 
Sbjct: 150 VVNISFRIKPGIDAHTHDFVQTGQIDSKFGVALENGEAIEIIGEAAKMKNVKVAGVHCHI 209

Query: 166 NCENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF------- 214
             +      F      ML+ I K       +IE ++LGGG                    
Sbjct: 210 GSQIFDLEPFKLAAKVMLEFIAKIKNEIGLEIEELNLGGGFGIKYTMNDDPIEYDHYIES 269

Query: 215 -CQRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVL------DISENIKNLVIVDSS 264
             + ++   E+       I +EPG +IV +       V       D+   +     +  +
Sbjct: 270 VSKVVRSVCEEKGIKLPFIVMEPGRSIVASAGITLYKVGAVKDIKDVRTYVSVDGGMTDN 329

Query: 265 VEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
               +         A            + G+ C +GD+  +      ++ GD ++     
Sbjct: 330 PRYALYQSRYDALIANRADAPKVQDVTIAGKCCESGDLLAKDIKMPEIQAGDILAVLATG 389

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            YN +  + +N I  P I +     +   ++   ++D   N
Sbjct: 390 AYNYSMSSNYNRIPKPPIVLVKNGKSRVIVKREDFDDIIRN 430


>gi|261495167|ref|ZP_05991630.1| diaminopimelate decarboxylase [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261309143|gb|EEY10383.1| diaminopimelate decarboxylase [Mannheimia haemolytica serotype A2
           str. OVINE]
          Length = 416

 Score =  229 bits (583), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 61/386 (15%), Positives = 119/386 (30%), Gaps = 25/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +L        +    +  A+K  +   + + + +   G    S  E
Sbjct: 26  GTPAYVYSRSTLERHLHAFNNAFGSHPHLVCFAVKSNSNIALLNVMARLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +              ++   K       A+          +VS+L++    A +L K   
Sbjct: 86  LERVLAAGGEASKVVFSGVAKSHSEIKRALEVGIRCFNIESVSELHRINQVAGELGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G       E            + G+  H   +  
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVTQAREVYRLAKTLPNVKITGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F         + ++      ++  + LGGG+          +P +     L++   
Sbjct: 206 ELQPFLDATDRLIILMEQLREDGIELHHLDLGGGLGVPYNGEEPPHPTEYAKALLEKLKG 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIY 282
             +++I +EPG AI  N   L T V  + +N      IVD+ +   +   L         
Sbjct: 266 YENLEIIIEPGRAITANAGILVTKVEYLKQNEDRNFAIVDTGMNDMIRPALYEAYMQITE 325

Query: 283 PNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +           V G  C   D  G+      +  GD I+      Y     + +N   
Sbjct: 326 VDKTLNRDKAVYDVVGPICETSDFLGKQRELA-ISEGDLIAIRSAGAYGAAMSSTYNSRP 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364
                + + +         ++ D + 
Sbjct: 385 QAAEIMVDGNQAHLIKARATFADLWR 410


>gi|225871912|ref|YP_002753366.1| diaminopimelate decarboxylase [Acidobacterium capsulatum ATCC
           51196]
 gi|225794282|gb|ACO34372.1| diaminopimelate decarboxylase [Acidobacterium capsulatum ATCC
           51196]
          Length = 436

 Score =  229 bits (583), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 66/394 (16%), Positives = 122/394 (30%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+     +    D            +  A+K  +A  +   L +   G    S  E
Sbjct: 39  GTPLYVYSADHIAQRFDLFARAFAPVSHLICFAVKANSALAILQLLEKRGAGFDIVSGGE 98

Query: 63  VMLGHE--KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           +       K   E   ++   K       A+ S        +  +L    ++A KL K+ 
Sbjct: 99  LERVLAVNKKAAERVVFSGVGKTAPEMDLALRSGILLFHVESEGELELLAERASKLRKRA 158

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCEN 169
              LR+NP V               + G +              +     G+  H   + 
Sbjct: 159 AVSLRVNPDVFAETHPYISTGLREHKFGIEMARARKVYRAVARHKYLEARGVSVHIGSQI 218

Query: 170 KSFLCF---SAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------DYP-----VKDFC 215
           +    F   +  +  +  +       I ++  GGG+    +       +       +   
Sbjct: 219 RMAEPFGAAAERVAALIGQLRKDGHGIRFLDAGGGLGIEYQAGLEDASFDPAERVQQYAA 278

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLL 274
             L   +    + + LEPG  +V     L T VL   +N  K+ VIVD+++   +   L 
Sbjct: 279 ALLHAVATVPEITLLLEPGRFLVAQAGALVTRVLYRKQNGAKHFVIVDAAMNDLIRPALY 338

Query: 275 YQESATI----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                 +            A + G  C  GD F        V+ G+ ++  D   Y ++ 
Sbjct: 339 QAHHEVVPVLPRRGARSMVADIVGPVCETGDFFARDRAMAAVREGELLAILDAGAYGMSL 398

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            + +N    P   + +        R  + ND   
Sbjct: 399 SSNYNSRVRPAEVLVSGKRARLIRRRETINDLLA 432


>gi|15966402|ref|NP_386755.1| diaminopimelate DAP decarboxylase protein [Sinorhizobium meliloti
           1021]
 gi|307315801|ref|ZP_07595314.1| diaminopimelate decarboxylase [Sinorhizobium meliloti BL225C]
 gi|307321017|ref|ZP_07600423.1| diaminopimelate decarboxylase [Sinorhizobium meliloti AK83]
 gi|15075673|emb|CAC47228.1| Probable diaminopimelate DAP decarboxylase [Sinorhizobium meliloti
           1021]
 gi|306893292|gb|EFN24072.1| diaminopimelate decarboxylase [Sinorhizobium meliloti AK83]
 gi|306898547|gb|EFN29221.1| diaminopimelate decarboxylase [Sinorhizobium meliloti BL225C]
          Length = 422

 Score =  229 bits (583), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 61/388 (15%), Positives = 109/388 (28%), Gaps = 26/388 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +         +    +  A+K  +   +  TL +   G    S  
Sbjct: 25  VGTPFYCYSTATLERHYKVFSQAFADVDAMVCYAMKANSNQAVLKTLGRLGAGLDVVSEG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E+              ++   K       A+ +        +  +L     +A +     
Sbjct: 85  ELRRALAAGIPAGRIMFSGVGKTAREMDFALEAGIYCFNVESEPELEVLNQRAVRAGRRA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
            +  RINP V           +  ++ G   +                V G+  H   + 
Sbjct: 145 PVSFRINPDVDARTHAKISTGKKENKFGISWERARGVYAHAAELPGIEVTGIDMHIGSQI 204

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221
                F    K +             IE + +GGG+    ++          +   +K  
Sbjct: 205 TELQPFDDAFKLLRELVDTLRSDGHVIEHVDIGGGLGIPYREDNNPPPLPDAYADIVKNQ 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
            +    +I  EPG  IV N   L T V+ + +   K  VIVD ++   +   L       
Sbjct: 265 LKGLDCKIVTEPGRLIVGNAGILVTEVVYVKDGGDKTFVIVDGAMNDLIRPTLYEAYHEI 324

Query: 281 IYPN-----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                         A V G  C  GD           K GD  +      Y   +   +N
Sbjct: 325 RPVKISAASAPRIKADVVGPVCETGDYLALDREMAMPKPGDLFAIGSAGAYGAVQAGTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY 363
              +    +   D          Y++  
Sbjct: 385 SRLLVPEVLVKGDRFHVIRPRRDYDELI 412


>gi|256112311|ref|ZP_05453232.1| diaminopimelate decarboxylase [Brucella melitensis bv. 3 str.
           Ether]
 gi|265993744|ref|ZP_06106301.1| diaminopimelate decarboxylase [Brucella melitensis bv. 3 str.
           Ether]
 gi|262764725|gb|EEZ10646.1| diaminopimelate decarboxylase [Brucella melitensis bv. 3 str.
           Ether]
          Length = 421

 Score =  229 bits (583), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 64/389 (16%), Positives = 118/389 (30%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+  +  +  +         +    +  ALK  +   +   L +   G  + S  
Sbjct: 25  VGTPFYVYSRATIERHFRVFHDAFADMDTLVTYALKANSNQAVLTALAKLGAGADTVSQG 84

Query: 62  EVMLGHEK-FGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHK 116
           E+              ++   K       A+ +        +  +L     +  A     
Sbjct: 85  EIRRALAASIPANRIVFSGVGKTPREMDFALEAGIYCFNVESEPELEILSARAVAAGKVA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            + LRINP V           +  ++ G        +  +       NV G+  H   + 
Sbjct: 145 PVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARAAYARAASLPGLNVVGIDMHIGSQI 204

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221
                F      +    KE       I  + +GGG+            P   + Q + + 
Sbjct: 205 IDLEPFDNAFALMAELVKELQADGHNIRHVDVGGGLGIPYRTDNTPPPPPVAYAQIVAKH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278
            +   ++   EPG  IV N   L T V+ + E + KN VIVD+++   +   L       
Sbjct: 265 IKPLGLKTVFEPGRLIVGNAGLLVTEVIFVKEGDAKNFVIVDAAMNDLIRPTLYDAFHDI 324

Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                   N     A   G  C  GD  G          GD I+      Y     + +N
Sbjct: 325 RPVIMPNDNAPRIRADFVGPVCETGDYLGLDREVAKPAPGDLIAICTTGAYGAVLSSTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    + + +         +Y +   
Sbjct: 385 SRLLIPEVLVDGERYHVVRPRRTYEELLA 413


>gi|323143200|ref|ZP_08077896.1| diaminopimelate decarboxylase [Succinatimonas hippei YIT 12066]
 gi|322417041|gb|EFY07679.1| diaminopimelate decarboxylase [Succinatimonas hippei YIT 12066]
          Length = 416

 Score =  229 bits (583), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 59/388 (15%), Positives = 128/388 (32%), Gaps = 24/388 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+  K  L+ +++            +  A+K  ++  +   +     G    S  E
Sbjct: 26  GSPLYIYSKATLVRHMNAFKEALAKKRHLICYAVKANSSLSILALMASLGAGFDVVSEGE 85

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +          +   ++   K     A       D     +V ++N     A+ L KK  
Sbjct: 86  LRRVIKAGGDPKKVVFSGVGKTAHEIAFALEQGIDCFNIESVPEINAISSVAKSLGKKAR 145

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
             +R+NP+V              ++ G    + +    +        + G+  H   +  
Sbjct: 146 VSVRVNPNVDAKTHPSISTGLKSNKFGIAYDEALAVYRQMAADPNLEICGIDCHIGSQMT 205

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
           S        +   ++ KE      +I+ I +GGG+  T  D       ++   +    + 
Sbjct: 206 SGAPILEATERLLDLYKELTECGIKIDHIDIGGGLGVTYGDETPPSPYEYMSAVINRLKD 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP 283
             + IY+EPG A+V N   L T  L + +       + D+ +   +   L       +  
Sbjct: 266 LDISIYVEPGRAMVANAGILVTKALYLKKGSVKNFCIVDAGMNDLIRPALYNSWMNIVEV 325

Query: 284 NTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       V G  C + D  G+      V  G+ ++      Y  +  + +N   +
Sbjct: 326 KKHQDAKVDLYDVVGPVCESDDFLGKERKLA-VSAGEYLAVRGAGAYGSSMSSNYNSRLL 384

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNNLS 367
               + + + +    +   ++  + N S
Sbjct: 385 CAEILVDKNKSYVIRKRQDFSQLWENES 412


>gi|289641898|ref|ZP_06474054.1| diaminopimelate decarboxylase [Frankia symbiont of Datisca
           glomerata]
 gi|289508307|gb|EFD29250.1| diaminopimelate decarboxylase [Frankia symbiont of Datisca
           glomerata]
          Length = 445

 Score =  229 bits (583), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 51/402 (12%), Positives = 110/402 (27%), Gaps = 40/402 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+     L+ +L        +    +  ++K  +   +   L     G    S  E
Sbjct: 26  GTPVYVYSHGTLVTHLRQVADAFADLAPLICFSVKALSNIHLLRGLAAAGAGVDVVSGGE 85

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +          +   +       +    AV S    +   +  ++      A +     G
Sbjct: 86  LYRALLAGVPAQRIVFAGVGKSDEELRYAVRSGIRCVNVESEGEMRALARAAAECRMPAG 145

Query: 120 LRINPSVS----YSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168
             +  +                R   + G             ++ E     GL FH    
Sbjct: 146 AAVRVNPDVAVGSRTPAKTTTGRRGGKFGIDLDRVHEVYRLAVDDEWLRPEGLHFHLGSP 205

Query: 169 NKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFS 222
                 +   +  +             +  I++GGG     +        DF   +    
Sbjct: 206 VFHPRAYGDAVDKVLTVTEKLTADGAPVPTINIGGGFPADYEGSGVPGWSDFAAVIAPKL 265

Query: 223 EKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA 279
             +      + +EPG +I  N   L  +V  +  +    V++  +  +H+     Y    
Sbjct: 266 RSFVAAGGTVVMEPGRSIAANAGVLLASVRYLKTSGSRNVVITDTGMSHLIRTAFYDTFH 325

Query: 280 TIYPNTGPY-----------------TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFED 322
            ++P                         V G  C + D   +      ++ GD ++   
Sbjct: 326 FLWPARPRNGLSPVGRTGEHDQPDLARYDVAGPLCESSDYLAKDRLLPSLRPGDVLAIFT 385

Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              Y +   + +N +  P   + +        R  +Y D  +
Sbjct: 386 AGAYGMTMASHYNSLPRPAEVLVDGGDVRLIRRRETYEDLVS 427


>gi|90409168|ref|ZP_01217284.1| putative carboxynorspermidine decarboxylase [Psychromonas sp.
           CNPT3]
 gi|90309728|gb|EAS37897.1| putative carboxynorspermidine decarboxylase [Psychromonas sp.
           CNPT3]
          Length = 376

 Score =  229 bits (583), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 173/367 (47%), Positives = 240/367 (65%), Gaps = 3/367 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TPY++ID+ KL+ NL+ A  +++ +GVKL+LALKCF+ +G F+T+  Y+DGTTSS  Y
Sbjct: 8   LNTPYFMIDESKLIENLEKAKRLKEISGVKLVLALKCFSTFGTFETIKPYLDGTTSSGPY 67

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG+E FGGETHAY+V Y   +I+ V    D IIFN++SQL+   D   K    +GLR
Sbjct: 68  EVKLGYETFGGETHAYSVGYSKNDIENVKHMADKIIFNSLSQLDAHYDN-TKQSASLGLR 126

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP  S +   LADP RP+SRLG K      S    V+G MFH NCENK    F A+L +
Sbjct: 127 INPERSQAGQDLADPARPYSRLGVKQSLLDLSVTDKVDGFMFHMNCENKDVDAFIAILDH 186

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I   F  ++ +++W+SLGGGI FT  +YP++     LK F++K+ +Q+YLEPGEAI+T T
Sbjct: 187 ISTTFSEYLDKLKWLSLGGGIFFTYPNYPIEKLGMALKNFAQKHQLQLYLEPGEAIITRT 246

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP--YTAMVCGRSCLA 299
           T L  +V+DI EN K   IVDS+ EAH  D L+Y E A++   +    Y  ++   SCLA
Sbjct: 247 TDLVVSVIDIVENDKKTAIVDSATEAHRLDTLIYNEPASVKEASANGIYPYVIGSCSCLA 306

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD F E  F+ P++IG ++   D AGY + + NWFNG+ MP+I  K VDG+I+ +  FSY
Sbjct: 307 GDQFCETQFDAPLQIGQKLHLLDSAGYTMVKLNWFNGLKMPSIYFKRVDGSIETLNSFSY 366

Query: 360 NDYYNNL 366
           +D+   L
Sbjct: 367 DDFKATL 373


>gi|326315781|ref|YP_004233453.1| diaminopimelate decarboxylase [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323372617|gb|ADX44886.1| diaminopimelate decarboxylase [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 427

 Score =  229 bits (583), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 57/390 (14%), Positives = 113/390 (28%), Gaps = 28/390 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+  +  +L+ L+          V++  A+K  ++  +     +   G    S  
Sbjct: 33  LGTPLYVYSRASMLSALEAYQRGFAGRKVQICYAMKANSSLAVLQLFARAGCGFDIVSAG 92

Query: 62  EVMLGHEKFG--GETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E+       G  G+     V     E+     +        +  +L    + A       
Sbjct: 93  ELRRVLAAGGEAGKVIFSGVGKTRQEMREALEAGIGCFNVESEPELEVLSEVAMACGRRA 152

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCEN 169
            + +R+NP+V              ++ G   +                V G+  H   + 
Sbjct: 153 PVSIRVNPNVDPKTHPYISTGLKGNKFGVAHERTVATYQRAAALPGLQVVGIDCHIGSQI 212

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY- 225
                +   +  +     +       I  I  GGG+                 +   +  
Sbjct: 213 TEATPYLDAVDRMLDLVAQIESAGIPIHHIDFGGGLGIDYNGDTPPAADALWTQLLARLD 272

Query: 226 -----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES- 278
                  Q  +EPG ++V N     T VL +    +    + D+++       +      
Sbjct: 273 ARGYGDRQFMIEPGRSLVGNAGVCLTEVLYVKPGEQKNFCIVDAAMNDLPRPAMYQAFHG 332

Query: 279 ----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
               A   P   P    V G  C +GD  G       V+ GDR++      Y  +  + +
Sbjct: 333 IVPVAAPAPGAAPAVYDVVGPVCESGDWIGRDRTLA-VRSGDRLAVLSAGAYCSSMGSNY 391

Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           N    P   + +              D + 
Sbjct: 392 NTRARPAEVLVDGGQAHLIRVREPLEDTFR 421


>gi|289432423|ref|YP_003462296.1| diaminopimelate decarboxylase [Dehalococcoides sp. GT]
 gi|288946143|gb|ADC73840.1| diaminopimelate decarboxylase [Dehalococcoides sp. GT]
          Length = 434

 Score =  229 bits (583), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 61/399 (15%), Positives = 122/399 (30%), Gaps = 36/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D+  +  N            A   +  A K F    +   L +        S 
Sbjct: 34  GTPLYIFDELTIRQNCRDFKREFSRRYADSSVSYASKAFLHPALLKILAEEGMSLDVVSG 93

Query: 61  YEVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115
            E+ + +   F  +    +   K  +    A+  +   I+ ++  ++      A +    
Sbjct: 94  GELSVANNAGFPMDMVYLHGNNKSAEELRLALRLHVGRIVVDSFDEIKLLSKLADESGHI 153

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCE 168
             I LRI P V           +  S+ G       E+          N+ G  FH   +
Sbjct: 154 PDILLRITPGVDAHTHQHITTGKLDSKFGFPLFQAAEAVGLAMAQASLNLVGFHFHIGSQ 213

Query: 169 NK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRL-- 218
                        +L    +    +   IE + +GGG     +      P+  + + +  
Sbjct: 214 IFETQPFLDAIDLVLDFAAQVQERYGFDIEELDIGGGYGVQYEVDKLAPPISAYAEAIGA 273

Query: 219 -----KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271
                    +     + +EPG AI+        TV  I +     +       +  ++  
Sbjct: 274 KVVSKCRSLKLTPPSLNIEPGRAIIAQAGVALYTVGVIKDIPGIRLYASVDGGMGDNIRP 333

Query: 272 YLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
            L   +   +  N           + G+ C +GDI         ++ GD ++      Y 
Sbjct: 334 ALYEAKYEAVVANNVQSAEKEKVTIAGKFCESGDILIRDIELPSLRTGDILAVPCCGAYC 393

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366
           +   + +NG + P + +          R  +  D  + L
Sbjct: 394 LPMSSNYNGYHRPAVVMLKNGEDRLIRRRETVEDL-SRL 431


>gi|254713605|ref|ZP_05175416.1| diaminopimelate decarboxylase [Brucella ceti M644/93/1]
 gi|254716041|ref|ZP_05177852.1| diaminopimelate decarboxylase [Brucella ceti M13/05/1]
 gi|261217809|ref|ZP_05932090.1| diaminopimelate decarboxylase [Brucella ceti M13/05/1]
 gi|261321343|ref|ZP_05960540.1| diaminopimelate decarboxylase [Brucella ceti M644/93/1]
 gi|260922898|gb|EEX89466.1| diaminopimelate decarboxylase [Brucella ceti M13/05/1]
 gi|261294033|gb|EEX97529.1| diaminopimelate decarboxylase [Brucella ceti M644/93/1]
          Length = 420

 Score =  228 bits (582), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 65/388 (16%), Positives = 117/388 (30%), Gaps = 25/388 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+  +  +  +         +    +  ALK  +   +   L +   G  + S  
Sbjct: 25  VGTPFYVYSRATIERHFRVFHDAFADMDTLVTYALKANSNQAVLTALAKLGAGADTVSQG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK----FKDKAQKLHK 116
           E+              ++   K               FN  S+        +  A     
Sbjct: 85  EIRRALAAGIPANRIVFSGVGKTPREMDFALEAGIYCFNVESEPELKILSARAVAAGKVA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            + LRINP V           +  ++ G        +  +       NV G+  H   + 
Sbjct: 145 PVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARAAYARAASLPGLNVVGIDMHIGSQI 204

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFS 222
                F      +    KE       I  + +GGG+    +      P   + Q + +  
Sbjct: 205 IDLEPFDNAFALMAELVKELQADGHNIRHVDVGGGLGIPYRTDNTPPPPVAYAQIVAKHI 264

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES--- 278
           +   ++   EPG  IV N   L T V+ + E + KN VIVD+++   +   L        
Sbjct: 265 KPLGLKTVFEPGRLIVGNAGLLVTEVIFVKEGDAKNFVIVDAAMNDLIRPTLYDAFHDIR 324

Query: 279 --ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                  N     A   G  C  GD  G          GD I+      Y     + +N 
Sbjct: 325 PVIMPNDNAPRIRADFVGPVCETGDYLGLDREVAKPAPGDLIAICTTGAYGAVLSSTYNS 384

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +    + + +         +Y +   
Sbjct: 385 RLLIPEVLVDGERYHVVRPRRTYEELLA 412


>gi|260220221|emb|CBA27542.1| Diaminopimelate decarboxylase [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 464

 Score =  228 bits (582), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 58/390 (14%), Positives = 117/390 (30%), Gaps = 29/390 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++  K  +L+ L            ++  A+K  ++  +     +   G    S  E
Sbjct: 71  GTPLFVYSKASMLDALAAYQRGFAGRNARICYAMKANSSLAILQLFAKAGCGFDIVSEGE 130

Query: 63  VMLGHEKF--GGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +          G+     V   +     A+          + ++++   + A        
Sbjct: 131 LARVLAAGADAGKVIFSGVGKTRAEMARALEVGIGCFNVESEAEIDVLNEVALGMGKQAP 190

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENK 170
           I +R+NP+V              ++ G   +                V G+  H   +  
Sbjct: 191 ISIRVNPNVDPKTHPYISTGLKGNKFGIAHERTLLTYQRAAALPGLKVVGIDCHIGSQIT 250

Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               +   +  +             I  I  GGG+                 +   K   
Sbjct: 251 EETPYLDAMDRMLDLVESIEAAGIGIHHIDFGGGLGINYNGDTPPAADALWHKLLAKLDA 310

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
                 Q+ +EPG ++V N     T VL +    +    +  +    +P   +YQ   TI
Sbjct: 311 RGFGQRQLMIEPGRSLVGNAGVCVTEVLYMKPGEQKNFCIVDAAMNDLPRPAMYQAFHTI 370

Query: 282 YPNT-------GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
            P         G     V G  C +GD  G     + V+ GD+++      Y ++  + +
Sbjct: 371 VPVKQAASQSSGAEVFDVVGPVCESGDWIGHDRTLQ-VQSGDKLAVLSAGAYCMSMSSNY 429

Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           N        + +   +    +  S+ D   
Sbjct: 430 NSRPKAAEVLVDGAHSHLIRQRDSFADQIR 459


>gi|255320350|ref|ZP_05361534.1| diaminopimelate decarboxylase [Acinetobacter radioresistens SK82]
 gi|262379367|ref|ZP_06072523.1| diaminopimelate decarboxylase [Acinetobacter radioresistens SH164]
 gi|255302545|gb|EET81778.1| diaminopimelate decarboxylase [Acinetobacter radioresistens SK82]
 gi|262298824|gb|EEY86737.1| diaminopimelate decarboxylase [Acinetobacter radioresistens SH164]
          Length = 416

 Score =  228 bits (582), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 65/386 (16%), Positives = 130/386 (33%), Gaps = 24/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  KQ    +             ++  A+K  +   +   L +   G    +  E
Sbjct: 25  GTPLYVYSKQAFEKHYTDMDRAFNFIDHQICFAVKSNSNLAVLGVLAKLGAGFDIVTGGE 84

Query: 63  VMLGH-EKFGGETHAYNV-AYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +              ++     + +I+ A+          + ++L++ +  A+KL +   
Sbjct: 85  LARVLAAGGDPAKVVFSGLGKTEIDIEKALNVGIACFNVESHAELDRIQKVAKKLGQKAP 144

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNC--- 167
           + LR+NP V              ++ G       E+          N+ G+  H      
Sbjct: 145 VSLRVNPDVDAKTHPYISTGLKENKFGIPSDSVFETYQYAASLPNLNIVGIDCHIGSQLT 204

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
           E K F+     +  + ++      Q++ I +GGG+  T KD     V+++   LK   +K
Sbjct: 205 ETKPFVDALERVMLMIEQLNELGIQLKHIDIGGGLGVTYKDEVPPTVQEYADALKPALQK 264

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++Y+EPG +I  N   L T V L    N +N  I+D+++   +   L          
Sbjct: 265 LGLKVYMEPGRSISANAGILLTRVDLLKPTNHRNFAIIDAAMNDLIRPALYEAWMDIQPV 324

Query: 284 NTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       + G  C  GD  G+      +   D ++      Y     + +N    
Sbjct: 325 EPHQDIQEKEWDIVGAICETGDFLGKERKLA-LAENDLLAVLGAGAYGFVMSSNYNTRAR 383

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365
               + N           +    +  
Sbjct: 384 AAEVMVNNHQAYLVRERETIESLWER 409


>gi|85711583|ref|ZP_01042641.1| Diaminopimelate decarboxylase [Idiomarina baltica OS145]
 gi|85694735|gb|EAQ32675.1| Diaminopimelate decarboxylase [Idiomarina baltica OS145]
          Length = 417

 Score =  228 bits (582), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 68/386 (17%), Positives = 118/386 (30%), Gaps = 26/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  K ++L N          +  KL  A+K  +   +   L Q+       S  E
Sbjct: 26  GTPLYVYSKSQILANWQKFR-AFWPSQHKLCYAVKANSNLAILQLLAQHGAWFDIVSGGE 84

Query: 63  VMLGHEKFGG--ETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +       G   +     VA  + EI  A+          + ++L + +  A+ L     
Sbjct: 85  LKRVLAAGGSANQVVFSGVAKSEAEIRFALEKGIACFNVESAAELERIEQVARALKTRAP 144

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D +             + G   H   +  
Sbjct: 145 VSLRVNPDVDAKTHPYISTGLKANKFGIAINDAMAVFRRAHTLNHIELLGADCHIGSQIM 204

Query: 171 SFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
           S   F    K + K          ++  + LGGG     + +   D    L+   +    
Sbjct: 205 SDAPFLDAAKRMFKLLERLQEEAIELSHLDLGGGFGVDYEGHATLDLENYLQGVIDLAHD 264

Query: 228 ----QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATIY 282
                + LEPG AIV +   L + V  I  +     + VD+ +   +   L       + 
Sbjct: 265 YPKLTLMLEPGRAIVGDAGVLISKVEYIKRSDDKQFVLVDAGMNDLMRPSLYQAWHDIVP 324

Query: 283 PNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
                        V G  C  G   G       V   D I+ +    Y     + +N   
Sbjct: 325 VRELTGVADGIVDVVGPVCETGCFLGHARHL-NVNADDLIAIKHAGAYGFTMASNYNTRV 383

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364
            P   +   D         +++D   
Sbjct: 384 RPAEVLVENDRAWLIRERETFDDLIR 409


>gi|195952897|ref|YP_002121187.1| diaminopimelate decarboxylase [Hydrogenobaculum sp. Y04AAS1]
 gi|195932509|gb|ACG57209.1| diaminopimelate decarboxylase [Hydrogenobaculum sp. Y04AAS1]
          Length = 420

 Score =  228 bits (582), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 62/386 (16%), Positives = 115/386 (29%), Gaps = 27/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+     + +         K+       ALK      +   L     G    S  E
Sbjct: 31  GTPLYVYSASYIKDKAKAYKEAFKDTDF--HYALKANGNLSIIKLLKDEGFGADIVSGGE 88

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117
           +              Y    K  E        +       +  +L+   D A+ L     
Sbjct: 89  LRKAIKAGIEASKIVYAGVGKTMEELKAAVEAEIKMFNVESSIELDILNDIAKNLGKKAN 148

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCENK 170
           + +R+NP V              S+ G   K            +  NV G+  H   +  
Sbjct: 149 VAIRVNPDVDPKTHPYISTGMKKSKFGVDIKTAYKEYQYAKSLKHLNVIGIHCHIGSQLL 208

Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDF----CQRLKEFSE 223
               +    + + + +         I++I +GGG+    K    +       + L    +
Sbjct: 209 DVSPYIEASEKVRELYDKLVKDGFDIKYIDMGGGLGIKYKPEEQEPHPKDLKEALYPAFK 268

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIY 282
               ++ LEPG ++V N   L T V  + +   K+ VIVD+ +   +   +       + 
Sbjct: 269 DIKARLCLEPGRSMVGNAGILITEVQFLKDKGHKHFVIVDAGMNDLIRPSIYGAYHHIVP 328

Query: 283 PNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +           + G  C  GD   +      V  GD ++      Y  +  + +N   
Sbjct: 329 THNKYKEDFIKTDIVGPICETGDFLAQDREIHKVDRGDYLAVLSAGAYGFSMSSHYNIRP 388

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364
                +             +Y DY +
Sbjct: 389 RAAEVLIENGKYRLIRSRETY-DYID 413


>gi|56476690|ref|YP_158279.1| diaminopimelate decarboxylase [Aromatoleum aromaticum EbN1]
 gi|56312733|emb|CAI07378.1| Diaminopimelate decarboxylase [Aromatoleum aromaticum EbN1]
          Length = 420

 Score =  228 bits (581), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 59/387 (15%), Positives = 117/387 (30%), Gaps = 23/387 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L    D            +  A+K  +  G+     +   G    S  E
Sbjct: 32  GTPTYVYSRAALEQAFDAYRDALAGRRALVCYAVKANSNLGVLAVFAKLGAGFDIVSGGE 91

Query: 63  V--MLGHEKFGGETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +  +L      G+     V     E+  A+ +        + ++L +    A +L     
Sbjct: 92  LSRVLAAGGDPGKVVFSGVGKSAGEMRQALAAGIRCFNVESEAELERLDMLAGELGTRAP 151

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCE-- 168
           I LR+NP V              ++ G          +         ++G+  H   +  
Sbjct: 152 IALRVNPDVDPKTHPYISTGLKNNKFGVAFDTALALYRRAAGMANVRISGIACHIGSQLL 211

Query: 169 -NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE---FSEK 224
            +      +  +  +  E       ++ I LGGG+    +D         L       + 
Sbjct: 212 DSGPIAEAAEKVLGLVDELAAEGIHLDHIDLGGGLGIRYRDEAPPSVAAYLAPLLRLLDG 271

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
            S ++  EPG +++ N   L T +  +     +N  IVD+++       L       +  
Sbjct: 272 RSEELCFEPGRSLIGNAGLLLTRIEYLKPGAERNFAIVDAAMNDLARPALYDAYHEAVAV 331

Query: 284 NTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                      + G  C +GD          V  GD ++      Y +   + +N     
Sbjct: 332 APRDVPERNYEIVGPICESGDFLAHDRPLA-VAAGDLVALLSAGAYGMAMSSNYNTRPRA 390

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNNLS 367
              + +        +  +    Y   S
Sbjct: 391 AEVIVDGSRMHLVRQRETVESLYALES 417


>gi|167854915|ref|ZP_02477691.1| diaminopimelate decarboxylase [Haemophilus parasuis 29755]
 gi|167853982|gb|EDS25220.1| diaminopimelate decarboxylase [Haemophilus parasuis 29755]
          Length = 419

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 68/386 (17%), Positives = 121/386 (31%), Gaps = 25/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  +   + + + +   G    S  E
Sbjct: 26  GTPAYIYSRATLERHWHAFDKAFGDHPHLICFAVKSNSNLALLNVIARLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +              ++   K     A             +VS+L +  + A +L K   
Sbjct: 86  LERVLAAGGDASKVVFSGVAKSHREIARALEVGIRCFNVESVSELKRINEVAGQLGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G   K+  E            + G+  H   +  
Sbjct: 146 ISLRVNPDVDAKTHPYISTGLKENKFGVSVKEAREVYRFATTLPHVKITGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F      +    ++      ++  + LGGG+  T       +P++     L +   
Sbjct: 206 ELQPFLDATDRVIVLMEQLKQDGIELHHLDLGGGLGVTYTDETPPHPMEYAAALLHKLRT 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIY 282
             +++I LEPG AI  N   L T V  I +N      IVD+ +   +   L       I 
Sbjct: 266 YPNLEIILEPGRAITANAGILVTKVEYIKQNEDRRFAIVDTGMNDMIRPALYEAYMQIIE 325

Query: 283 PNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            N           V G  C   D  G+      +  GD I+      Y     + +N   
Sbjct: 326 VNQSLVREKAIYDVVGPICETSDFLGKQREL-TITEGDLIAMRSAGAYGATMSSTYNSRP 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364
                + + D         S+ D + 
Sbjct: 385 QAIEVMVDGDKAHLIKARASFEDLWR 410


>gi|71905849|ref|YP_283436.1| diaminopimelate decarboxylase [Dechloromonas aromatica RCB]
 gi|71845470|gb|AAZ44966.1| diaminopimelate decarboxylase [Dechloromonas aromatica RCB]
          Length = 420

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 62/389 (15%), Positives = 121/389 (31%), Gaps = 28/389 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR----KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
            TP Y+  +  L  +L     +        G  +  A+K  +   + +   +   G    
Sbjct: 26  GTPAYVYSRAALEASLREFHDVLGGHVAGQGALVCYAVKANSNLAILNVFARLGAGFDIV 85

Query: 59  SLYEVMLGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QK 113
           S  E+          +   ++   K  D    A+          + ++L +  + A    
Sbjct: 86  SGGELQRVLAAGADPKKVVFSGVGKTADEMKLALDVGIFCFNVESAAELERLNEVASQCG 145

Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNN 166
               I LR+NP+V              ++ G    + ++   +        V G+  H  
Sbjct: 146 KKAPISLRVNPNVDPKTHPYISTGLKGAKFGVAYDNALDLYRRAAALPSIEVTGIDCHIG 205

Query: 167 CENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR----LK 219
            +      F   L  I     +       I  + LGGG+         +         L 
Sbjct: 206 SQLLDPSPFVEALDRILALVDQMAAEGIHIHHLDLGGGLGIKYNAEQAQPTVASYLTPLL 265

Query: 220 EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES 278
           +      +Q+ LEPG  +V N   L T +  + +   KN  I+D+++   +   L     
Sbjct: 266 DKLAGRGLQVVLEPGRRLVGNAGLLLTRIEYLKQGEAKNFAIIDAAMNDLMRPALYEAWH 325

Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                +  +       V G  C  GD  G+      V+ GD ++      Y +   + +N
Sbjct: 326 DINPVVPRSGVATEYDVVGPVCETGDFLGQARPLV-VEAGDLLAVMSAGAYGMAMASNYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
                   + + D      +  +    Y 
Sbjct: 385 TRPRAVEVMVDGDKIHVIRQRETVEQLYA 413


>gi|149912175|ref|ZP_01900758.1| carboxynorspermidine decarboxylase [Moritella sp. PE36]
 gi|149804745|gb|EDM64791.1| carboxynorspermidine decarboxylase [Moritella sp. PE36]
          Length = 397

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 176/377 (46%), Positives = 245/377 (64%), Gaps = 13/377 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPY++I + KLL NL+    ++  +GVKL+LALKCF+ WG F+T+++Y+DGTTSS  Y
Sbjct: 19  LKTPYFMIHEDKLLRNLEICKQLKDLSGVKLVLALKCFSTWGTFNTISKYLDGTTSSGPY 78

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LGHE F GETHAY+V Y + ++ AV    D IIFN+VSQL + +         +GLR
Sbjct: 79  EVQLGHETFPGETHAYSVGYSEDDVIAVRDIADKIIFNSVSQLERMQPL-LPASSSVGLR 137

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP VSY+   LADP R +SRLG K        +  ++GLMFH NCENK F+ ++ +L  
Sbjct: 138 INPEVSYAGQDLADPARAYSRLGVKQAGLTAETVAKLDGLMFHMNCENKDFVAYNKILTT 197

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I ++F   + Q+ W+SLGGG+ FT   YPV +    LK F+EK+ VQ+YLEPGEA++T+T
Sbjct: 198 ISEQFSAHLDQVSWVSLGGGLFFTYPGYPVAELALALKAFAEKHQVQLYLEPGEAVITDT 257

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAMVCGRSCLA 299
           T L  +VLDI EN K   IVDS+ EAH  D L+Y E A+       G +  ++   SCLA
Sbjct: 258 TDLVVSVLDIVENDKKTAIVDSATEAHRLDTLIYNEPASFAEATEDGQHPYIIGSCSCLA 317

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD----------G 349
           GDIFGE +F +P+++GDR++ +D AGY + + NWFNG+ MP+I  K V           G
Sbjct: 318 GDIFGEANFPQPLQVGDRLTIKDSAGYTMVKLNWFNGLKMPSIYYKRVGSGGVDGERVEG 377

Query: 350 TIKAIREFSYNDYYNNL 366
            I+ + +F+Y D+   L
Sbjct: 378 KIETLNQFNYQDFKATL 394


>gi|330507768|ref|YP_004384196.1| diaminopimelate decarboxylase [Methanosaeta concilii GP-6]
 gi|328928576|gb|AEB68378.1| diaminopimelate decarboxylase [Methanosaeta concilii GP-6]
          Length = 427

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 67/384 (17%), Positives = 118/384 (30%), Gaps = 30/384 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +++L  N+            +   A+K      +     Q   G    S  E
Sbjct: 30  GTPLYVTSERRLRENIRRYHRAF--PDAEKYFAVKANGNLAILQVAAQEGMGADIFSAGE 87

Query: 63  VMLGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--I 118
           + L        +   +N     + +  A L     I  ++  +L      A+ L  +  I
Sbjct: 88  LSLVRLAGIPRDMILFNGNSKSEKDHIAALQAGVRISVDSNEELEHLARTARNLDSEAEI 147

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCENKS 171
             R+NP+VS             S+ G   +    +  + +        GL  H   +   
Sbjct: 148 LFRVNPNVSPKTHPKIATGLRSSKFGIPAEQVAGTYKRAMELEGIKPVGLHCHIGSQILD 207

Query: 172 FLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYP----VKDFCQRLKEFSEK 224
              F+     +             +E I LGGG+    +         D  + +    + 
Sbjct: 208 TAPFAEAAGRMMDITRAVVAEGGNVERIDLGGGLGIQYQPDSTAPLPSDLAKAVLPVIQD 267

Query: 225 YSVQI------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
               +       LEPG +IV ++T + T V  +     N V VD+         L     
Sbjct: 268 SCRDMGIFPQLILEPGRSIVADSTIMLTGVNVVKRAHVNFVAVDAGFNVLARPMLYDSYH 327

Query: 279 A----TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                      G  T  + G  C  GD+         +  GD ++F D   Y  +  + +
Sbjct: 328 HVLAANRAEEQGEETYTIVGPICETGDVLARDRRLPRLVRGDTLAFLDAGAYGFSMASQY 387

Query: 335 NGINMPTIAVKNVDGTIKAIREFS 358
           NG   P   + + D          
Sbjct: 388 NGQPRPAEVLVSEDRWELIRHRED 411


>gi|317128511|ref|YP_004094793.1| diaminopimelate decarboxylase [Bacillus cellulosilyticus DSM 2522]
 gi|315473459|gb|ADU30062.1| diaminopimelate decarboxylase [Bacillus cellulosilyticus DSM 2522]
          Length = 444

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 61/400 (15%), Positives = 133/400 (33%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP ++ D + ++N         +      ++  A K F++  MF  +++        S 
Sbjct: 30  GTPLFVYDVKDIVNRAQAFKSAFEEENIEYQVAYASKAFSSIAMFQLIDELGLSLDVVSG 89

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    +  F  E   ++   K  +   +        I+ +  ++L+      Q L K+
Sbjct: 90  GELYTALKSNFPVERIHFHGNNKSPDEIEMAVKEGIGCIVVDNFTELSWLMAITQSLKKE 149

Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEK-----CKDKIESEIKN----VNGLMFHNN 166
           +   +RI P V           +  S+ G        +  I    ++    + G+  H  
Sbjct: 150 MKVLIRITPGVEAHTHEYISTGQEDSKFGFDIQSGQAEKAIMMIQEHQYVQLEGVHSHIG 209

Query: 167 CENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK--------DF 214
            +      F     A+  ++         +   ++LGGG                     
Sbjct: 210 SQIFETDGFTSAVEAIYNHLLTWKNKLGYEPNVLNLGGGFGIKYTIEDEPLPLEEYVQAM 269

Query: 215 CQRLKEFSEKYSV---QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            + +K +++K+++   ++++EPG ++V    T   ++    E       V     +  ++
Sbjct: 270 VKAVKHYAQKFNMTLPEVWIEPGRSLVGEAGTTIYSIGSRKEIPGIRTYVSVDGGMTDNI 329

Query: 270 PDYLLYQESA----TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   + A                + G+ C +GD+          + GD ++      
Sbjct: 330 RPALYQAKYAAQIANKMDGKSEELVSIAGKCCESGDMLIWDIELPKTEAGDLLAVFSTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +           I+  SY D   N
Sbjct: 390 YGYSMANNYNRILRPAVIFVEDGQEQCVIKRESYEDLVKN 429


>gi|171462912|ref|YP_001797025.1| diaminopimelate decarboxylase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171192450|gb|ACB43411.1| diaminopimelate decarboxylase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 432

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 64/391 (16%), Positives = 125/391 (31%), Gaps = 30/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG----VKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
            TP Y+  K+ L            +A      ++  A+K  +   + D   +   G    
Sbjct: 36  GTPLYVYSKKALTEAYQAYDKACVDANGKRRARVHYAMKANSNLAVIDCFKKLSSGFDLV 95

Query: 59  SLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKL- 114
           S  E+          ++  +    K     A         I   ++++L+K    A +L 
Sbjct: 96  SGGELARALAIGADPKSLVFAGVGKSAAEIAAALKAGVKCINAESIAELHKINQVATELK 155

Query: 115 -HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNN 166
               I LR+NP V              ++ G    + +++          +V G+  H  
Sbjct: 156 LRAPISLRVNPDVDAQTHPYISTGLKGNKFGIVYHEVLKTYREASLLSQIDVVGIDCHIG 215

Query: 167 CENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223
            +  +   +   L  +     +       I  + LGGG+  +  D    D  +       
Sbjct: 216 SQITTIAPYLDALDKVLDLVAQLKKEGIAIHHLDLGGGLGISYSDETPPDITEFTNTLLN 275

Query: 224 KY------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQ 276
           +        + + LEPG ++V N   L TTV  +    +    + D+S+   +   L   
Sbjct: 276 RVAERGFGHLDVVLEPGRSLVGNAGVLLTTVEYLKPGAEKNFCIVDASMTELMRPALYEA 335

Query: 277 ESATIYPNTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
               +     P    T  + G  C +GD  G       V+ GD ++      Y     + 
Sbjct: 336 HHGIVPVKNKPAEALTYDIVGPVCESGDWLGRNRHLA-VEEGDLLAILSAGAYGFVMASN 394

Query: 334 FNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +N    P   + +           +  D ++
Sbjct: 395 YNTRPKPAEIMVDGKNIYIIRARENTADLFS 425


>gi|294499104|ref|YP_003562804.1| diaminopimelate decarboxylase [Bacillus megaterium QM B1551]
 gi|294349041|gb|ADE69370.1| diaminopimelate decarboxylase [Bacillus megaterium QM B1551]
          Length = 442

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 61/400 (15%), Positives = 128/400 (32%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           + +G   ++  A K F    M + L +        S 
Sbjct: 30  GTPLYIYDQELIETKCKAFHSAFQRSGFSYQIAYAGKAFLCMEMANLLTKLDMSLDVVSG 89

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+    E  +  E   ++   K  E   +   +N    + +  ++L      A  +K  
Sbjct: 90  GELFTALEAGYPAERIHFHGNNKTIEEIEMALDANIGCFVVDNFTELEVLHALAAERKQK 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
             I LR+ P +           +  S+ G    +          +E    N+ G+  H  
Sbjct: 150 ASILLRVTPGIEAHTHEYIMTGQEDSKFGFGLSNDQAMKAVSSALEKPYYNLLGIHCHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            +      FS  +  +             +++ +++GGG      +       +   +  
Sbjct: 210 SQIFEVDGFSRAIDILTDFLFNIRDKMDFEVKVLNVGGGFGIRYTESDSPLPVEYYVDAL 269

Query: 223 EKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269
            +              ++++EPG +IV    T   T+    E         +D  +  ++
Sbjct: 270 TEKLSRTLTEQNYTLPEVWIEPGRSIVGEAGTTLYTIGSTKEIPGVRKYVGIDGGMTDNI 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   +      +    T  + G+ C +GD+         V  GD ++      
Sbjct: 330 RPALYDAKHEAVLANRVTDKKDETVSIAGKCCESGDMLIWDIDLPRVNQGDLLAVSSTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           YN +  + +N I  P +          A+   +Y D    
Sbjct: 390 YNYSMASNYNRIPRPAVVFVKNGEARLAVERETYEDLVRK 429


>gi|315636623|ref|ZP_07891857.1| diaminopimelate decarboxylase [Arcobacter butzleri JV22]
 gi|315479132|gb|EFU69831.1| diaminopimelate decarboxylase [Arcobacter butzleri JV22]
          Length = 407

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 66/383 (17%), Positives = 126/383 (32%), Gaps = 21/383 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TPYY+ D   + N  +      +     +  A+K  +   +   L     G    S+ E
Sbjct: 18  QTPYYVYDFNYITNQYEELKSAFRARKSLIAYAVKANSNLSVIKHLANLGAGADCVSIGE 77

Query: 63  VMLGHE-KFGGETHAYNV-AYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIG 119
           V    +         ++     D EI   L      I   + ++L++ +  A++L+K   
Sbjct: 78  VKRALKVGIPSYKIIFSGVGKIDDEIRQALELDILMINVESSAELDRVEIIAKELNKIAR 137

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNC--- 167
           +  R+NP++              ++ G          I+          G+  H      
Sbjct: 138 ISIRVNPNIDPKTHPYISTGLHENKFGVDIDSAKRMYIQCKNSENLDPVGIHCHIGSQLT 197

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
           E +       ++ ++ K       ++ +I +GGG+    KD       ++ Q + E    
Sbjct: 198 ELQPIKEAVKIIADLVKNLKAIKIELSFIDIGGGLGIIYKDEKLIDTYEYAQSILETMFG 257

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLL--YQESATI 281
             + I  EPG  IV N+    T VL       K  VIVD ++   +   L   Y     +
Sbjct: 258 LDITIICEPGRFIVGNSGIFVTKVLYEKINGNKRFVIVDGAMNDLIRPALYNAYHRIEVL 317

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
             N       + G  C +GD F +       +  D ++      Y     + +N      
Sbjct: 318 NDNQDFSDCNLVGPVCESGDFFAKNIQLPKTEHNDLVAIYSAGAYGFTMSSNYNTRGKVA 377

Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364
                        +  ++ D   
Sbjct: 378 EIAIEDGKDRLIRKRETFEDLIA 400


>gi|170695718|ref|ZP_02886860.1| diaminopimelate decarboxylase [Burkholderia graminis C4D1M]
 gi|170139323|gb|EDT07509.1| diaminopimelate decarboxylase [Burkholderia graminis C4D1M]
          Length = 420

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 56/387 (14%), Positives = 120/387 (31%), Gaps = 26/387 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L    +            + +A+K  +   + +   +   G    S  E
Sbjct: 28  GTPLYVYSRAALTAAWNAYAGACAGRRASVHVAVKANSNLAVLNVFARLGAGFDIVSGGE 87

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +          E   ++    + +   +A+ +        ++ +L++    A ++     
Sbjct: 88  LARVLAAGGKAENTVFSGVGKHANEMREALAAGVKCFNVESIPELDRLNQVAAQMGKKAP 147

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G   +D               V G+  H   +  
Sbjct: 148 VSLRVNPDVDAKTHPYISTGLKSNKFGVAFEDARATYQAAAAMTNLEVVGIDCHIGSQIT 207

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               +   +  +    ++       I  I +GGG+  T  D    D  + ++   ++   
Sbjct: 208 EIAPYLDAVDKVLELVEQIEQDGVTIRHIDVGGGLGITYDDETPPDIGEFVRTVLDRIEA 267

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                 ++Y EPG ++V N   L T V  +     KN  IVD+++       +     A 
Sbjct: 268 RGHGHREVYFEPGRSLVGNAGVLLTRVEFLKPGAEKNFAIVDAAMNDLARPAMYDAYHAI 327

Query: 281 IYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                     +   + G  C +GD  G       V+ GD ++      Y     + +N  
Sbjct: 328 DAAVKRDVPAHVYDIVGPVCESGDWLGRERLLS-VEPGDLLAIRSAGAYGFVMSSNYNTR 386

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
                 + +                + 
Sbjct: 387 PRAAEVMVDGTQAHVVRAREEVQQLFA 413


>gi|90408777|ref|ZP_01216922.1| diaminopimelate decarboxylase [Psychromonas sp. CNPT3]
 gi|90310121|gb|EAS38261.1| diaminopimelate decarboxylase [Psychromonas sp. CNPT3]
          Length = 420

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 59/382 (15%), Positives = 123/382 (32%), Gaps = 28/382 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +  +              +  A+K  +  G+ + + +   G    S  E
Sbjct: 27  GTPAYVYSRATIERHWKGLDKAASAYPHMICYAVKANSNLGVLNIMARLGSGFDIVSAGE 86

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--K 117
           ++         +   ++   K     A             ++S+L +    AQ L+    
Sbjct: 87  LLRVIQAGGDPKKVVFSGVGKTEIEIATALQASIFCFNIESISELYRINSVAQSLNIKAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I +RINP++              ++ G + +  +             + G+  H   +  
Sbjct: 147 ISIRINPNIDAGTHPYISTGLKENKFGIEIEQALNVYLLAERLEFIEIKGVDCHIGSQIT 206

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
           +   F   L     +  E       I  + LGGG+    ++    +    ++E  +K   
Sbjct: 207 TLAPFLEALDKLLVLIDELEEVGITITHLDLGGGLGVPYQNETPPEPEDYMREIIKKMGS 266

Query: 226 -SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIYP 283
            ++++  EPG +I+ N   L T V  +  N +    IVD+++   +   L       I  
Sbjct: 267 RNLKLLFEPGRSIMANAGVLITKVEYLKINEQKNFAIVDAAMNDLLRPALYNAWQEIIPI 326

Query: 284 NTG--------PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           N               + G  C + D  G+      V  GD ++      Y     + +N
Sbjct: 327 NNKLQTSTIRPERNYDIVGPICESADFLGKDRTLS-VAEGDYLAVRSSGAYGSTMSSNYN 385

Query: 336 GINMPTIAVKNVDGTIKAIREF 357
               P   + + +         
Sbjct: 386 SRCRPVEVMVDSEKAFIVRERE 407


>gi|153953245|ref|YP_001394010.1| hypothetical protein CKL_0608 [Clostridium kluyveri DSM 555]
 gi|219853879|ref|YP_002471001.1| hypothetical protein CKR_0536 [Clostridium kluyveri NBRC 12016]
 gi|146346126|gb|EDK32662.1| LysA [Clostridium kluyveri DSM 555]
 gi|219567603|dbj|BAH05587.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 431

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 64/399 (16%), Positives = 128/399 (32%), Gaps = 36/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP Y+ID++ + +         K     K+  A K F    M   +N         S  
Sbjct: 29  GTPLYVIDEKLVRDKCRRYYKAFKAHKNNKVTYAGKAFLNLAMCQIINSEGLYLDVVSEG 88

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSN--CDTIIFNTVSQLNKFKDKAQKL--HK 116
           E+    +  F  E   ++   K  E   +  +      + + + +++K    A++    +
Sbjct: 89  ELYTALKSGFPMEKIYFHGNNKTLEEIEMGIDLEVGRFVVDNLYEMDKINSLAKEKGKIQ 148

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNNC 167
           K+ LRI P +           +  S+ G            K  I      + G+  H   
Sbjct: 149 KVLLRITPGIEAHTHEYIKTGQIDSKFGFTMINGEIIDVVKKAISLSNIKLTGIHCHIGS 208

Query: 168 ENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223
           +             MLK + K       ++E + LGGG              +       
Sbjct: 209 QIFETKPYEDEVEIMLKLVRKIKDETGYEVEELDLGGGFGIYYTPEDKPKTVEDFCSIIL 268

Query: 224 KYSVQ-----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVP 270
           + +             + +EPG +I+ N  T   T+  I E       V     +  ++ 
Sbjct: 269 ERAEMKSKELGIRVPSLVIEPGRSIIGNAGTTLYTIGAIKEIPGVRKYVSVDGGMVDNIR 328

Query: 271 DYLLYQESAT----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
             L              +       + G+ C +GD+  +      V+ GD ++      Y
Sbjct: 329 PALYNAPYECTVANRVEDDSKEVVTIAGKCCESGDVLIKNVQLPKVQSGDILAVFTTGAY 388

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
             +  + +N I +P + +     +    +  S+++   N
Sbjct: 389 GYSMASNYNKIPIPAVVLVKNGQSRLISKRQSFDNMIEN 427


>gi|218530082|ref|YP_002420898.1| diaminopimelate decarboxylase [Methylobacterium chloromethanicum
           CM4]
 gi|218522385|gb|ACK82970.1| diaminopimelate decarboxylase [Methylobacterium chloromethanicum
           CM4]
          Length = 422

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 60/389 (15%), Positives = 113/389 (29%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +              +  A+K  +   +  TL     G    S  
Sbjct: 25  VGTPFYCYSTATLERHYRVFAEAFAGDDALVCFAMKANSNQAVLATLAHQGAGMDIVSEG 84

Query: 62  EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116
           E+         GE   ++     ++    A+ +N       +  +L    + A  +    
Sbjct: 85  ELRRALAAGVQGERIVFSGVGKTREEMAAALDANILCFNVESEPELAALSEVAVARGRKA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
            + +R+NP V           +  ++ G                    + G+  H   + 
Sbjct: 145 PVSIRVNPDVDALTHAKISTGKSDNKFGIPISRARAVYAGAARLPGLEIVGVDAHIGSQI 204

Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221
              + F    + + +          ++  +  GGG+                    L+  
Sbjct: 205 TDLIPFDNAARLLCELARDLLADGHRLHHVDFGGGLGIPYRDDNAPPPDPAALAAILRPH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESAT 280
            +   ++   E G  I  N   L T V+ +   + K  VIVD ++   +   L     A 
Sbjct: 265 FKPLGLRPVFEIGRMIAGNAGILVTRVIYVKPTDEKTFVIVDGAMNDLIRPTLYEAFHAL 324

Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                        TA V G  C +GD          V  GD I+      Y   +   +N
Sbjct: 325 RPVREPAPDTPRLTADVVGPVCESGDYLALGREMPMVAPGDLIAVMSAGAYGAVQACTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    +   D +       SY+D   
Sbjct: 385 SRRLVPEVLVTGDRSAVVRPRPSYDDLIR 413


>gi|282878501|ref|ZP_06287284.1| carboxynorspermidine decarboxylase [Prevotella buccalis ATCC 35310]
 gi|281299389|gb|EFA91775.1| carboxynorspermidine decarboxylase [Prevotella buccalis ATCC 35310]
          Length = 398

 Score =  228 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 120/376 (31%), Positives = 186/376 (49%), Gaps = 15/376 (3%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y++++ KL  NL     + + A V+++LA K +A W  F    +Y+  TT+SSL E +
Sbjct: 23  PIYILEETKLRRNLQLISSVAERADVEIILAFKAYALWKTFPVFREYIHSTTASSLNEAL 82

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIGLRI 122
           LG   F   TH Y+ AY++ EI+ +      + FN++SQL +F    K       +GLRI
Sbjct: 83  LGFHIFSAPTHTYSPAYEEDEIEEIARLSSHLTFNSLSQLERFGQTVKCVNPSVNVGLRI 142

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           NP  S     L +P  P +R G             V G   H +CE+     F   L +I
Sbjct: 143 NPEYSEVGTDLYNPCAPGTRFGVTANKLPCELPSVVTGFHCHCHCESG-ADVFQRTLAHI 201

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNT 241
           E++F  + +QI+WI+ GGG   T KDY +    Q L +F +KY   ++ LEPG A    T
Sbjct: 202 EEKFSPWFSQIKWINFGGGHLMTRKDYDINLLVQTLLDFKKKYPHLKVILEPGSAFAWQT 261

Query: 242 TTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP----------NTGPYTA 290
             L   V+D+ E+      + + S   H+PD L      T+             T  +  
Sbjct: 262 GPLVAQVVDVVEDHSIRTAILNVSFTCHMPDCLEMPYVPTVRFADIVEEENHLPTKEHIY 321

Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGT 350
            + G SCL+GD  G +HF   ++IG+ I FED+  Y   + N FNG+  P I     DG 
Sbjct: 322 RLGGNSCLSGDFMGSWHFNHELQIGENIIFEDMMHYTTVKTNMFNGVGHPAIGFLRQDGE 381

Query: 351 IKAIREFSYNDYYNNL 366
           ++ +R+++++DY   +
Sbjct: 382 LEMLRKYTFDDYAARM 397


>gi|299132212|ref|ZP_07025407.1| diaminopimelate decarboxylase [Afipia sp. 1NLS2]
 gi|298592349|gb|EFI52549.1| diaminopimelate decarboxylase [Afipia sp. 1NLS2]
          Length = 421

 Score =  228 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 58/381 (15%), Positives = 109/381 (28%), Gaps = 26/381 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +              +  A+K  +   +  TL +   G    S  
Sbjct: 25  VGTPFYCYSTATLERHYRVFAEAFAGLDTLVCYAMKANSNQSVLRTLARLGAGADVVSGG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+M         +   ++   K       A+  N   I   +  +L+     A +     
Sbjct: 85  ELMRARAAGIPADRIVFSGVGKTESELRQALAENILCINVESEPELDLLSRIAHETGNTA 144

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCEN 169
              LR+NP +           +  ++ G   +          +     V G+  H   + 
Sbjct: 145 RISLRLNPDIGAGGHAKISTGKSENKFGIPLEGARAVYARAAKLPGIRVTGVDMHIGSQI 204

Query: 170 KSFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEF 221
                  +         +        I+ I  GGG+    +           +   +K  
Sbjct: 205 TDLGPMESAFTLLVDFVRTLRADGHAIDHIDFGGGLGIPYESDLPVPPAPDAYADVVKRV 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
           +      +  EPG  IV N   L + V+ +     +N VI+D+++   +   L       
Sbjct: 265 TRGLDCTLMFEPGRMIVGNAGILVSRVIYVKHGEARNFVIIDAAMNDLIRPTLYEAHHDI 324

Query: 281 IYPNTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           I             A V G  C  GD          +K GD ++      Y   +   +N
Sbjct: 325 IPVREVSSPGDGIVADVVGPVCETGDYLALGRHLPALKAGDLVAVMSSGAYGAVQAGTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIRE 356
              +    +   D        
Sbjct: 385 TRGLVPEVLVKGDQYAVVRPR 405


>gi|254419909|ref|ZP_05033633.1| diaminopimelate decarboxylase [Brevundimonas sp. BAL3]
 gi|196186086|gb|EDX81062.1| diaminopimelate decarboxylase [Brevundimonas sp. BAL3]
          Length = 424

 Score =  228 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 54/393 (13%), Positives = 118/393 (30%), Gaps = 29/393 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAG-----VKLLLALKCFAAWGMFDTLNQYMDGTT 56
           + TP Y+     L  +                   +  A+K  +   +  TL +   G  
Sbjct: 25  VGTPVYVYSTATLKRHYGLLRAAADAHREALGEALIAFAVKANSNLSVLATLAKLGSGAD 84

Query: 57  SSSLYEVMLGHE-KFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKA-- 111
           + S  E+          +   ++   K     + A+      I   + ++L++    A  
Sbjct: 85  TVSEGEIRRALAAGIPADRIIFSGVGKTDVEMVFAIGVGVRQINIESGAELDRLIAVAAL 144

Query: 112 QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFH 164
            +    + +R+NP+V               + G   ++ +    +          GL  H
Sbjct: 145 MQASPAVAVRVNPNVGAGGHAKITTGGKGDKFGVPVEEAMALYARASASPYVTPVGLACH 204

Query: 165 NNCENKSFLCFSAML---KNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQR 217
              +        A       + ++       +  + LGGG+        +     D+   
Sbjct: 205 IGSQINDLAPLEAAFTVLAQMTRDLRAQGHAVTRLDLGGGLGVPYSGGVEPPSPADYVAM 264

Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDYLLY 275
                    V+   EPG  +  N   L + V+ ++E    +  +++D+++   +   L  
Sbjct: 265 AARVLSGLDVEAAFEPGRLLAANAGVLLSQVIQVNERSDGRRFLVLDAAMNDLMRPALYD 324

Query: 276 QES---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                           +  V G  C  GD F       P++  D + F     Y     +
Sbjct: 325 AFHDIKPVNPRPGAALSHDVVGPVCETGDTFARDRSLPPLEAEDLVVFTGAGAYGAVMAS 384

Query: 333 WFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            +N   +    + + D         +Y D  + 
Sbjct: 385 EYNSRPLVPEVLVDGDQWAVIRPRPTYEDMLDR 417


>gi|296159586|ref|ZP_06842410.1| diaminopimelate decarboxylase [Burkholderia sp. Ch1-1]
 gi|295890294|gb|EFG70088.1| diaminopimelate decarboxylase [Burkholderia sp. Ch1-1]
          Length = 420

 Score =  228 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 55/380 (14%), Positives = 120/380 (31%), Gaps = 26/380 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L    +            + +A+K  +   + +   +   G    S  E
Sbjct: 28  GTPLYVYSRAALTEAWNAYAGACAGRRASVHVAVKANSNLAVLNVFARLGAGFDIVSGGE 87

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +          E   ++      +   +A+ +        ++ +L++    A        
Sbjct: 88  LARVLAAGGKAENTVFSGVGKNANEMREALAAGVKCFNVESIPELDRLNAVAAEMGKKAP 147

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           + LR+NP V              ++ G   +D   +           V G+  H   +  
Sbjct: 148 VSLRVNPDVDAKTHPYISTGLKSNKFGVAFEDARATYQAAAGMANLEVVGIDCHIGSQIT 207

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               +   +  +    ++      +I  I +GGG+  T  D    +  + ++   ++   
Sbjct: 208 EVAPYLDAVDKVLELVEQIEQDGLKIRHIDVGGGLGITYDDETPPEIGEFVRTVLDRIEA 267

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278
                 ++Y EPG ++V N   L T V  +     KN  IVD+++       +       
Sbjct: 268 RGHGHREVYFEPGRSLVGNAGVLLTRVEFLKPGAEKNFAIVDAAMNDLARPAMYEAYHAI 327

Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
              +  +   +   V G  C +GD  G       ++ GD ++      Y     + +N  
Sbjct: 328 DPVVKHDVPAHVYDVVGPVCESGDWLGRERLLA-IEPGDLLAIRSAGAYGFVMSSNYNTR 386

Query: 338 NMPTIAVKNVDGTIKAIREF 357
                 + +   T       
Sbjct: 387 PRAAEVMVDGTQTHVIRARE 406


>gi|21674193|ref|NP_662258.1| diaminopimelate decarboxylase [Chlorobium tepidum TLS]
 gi|21647356|gb|AAM72600.1| diaminopimelate decarboxylase [Chlorobium tepidum TLS]
          Length = 416

 Score =  228 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 68/386 (17%), Positives = 124/386 (32%), Gaps = 23/386 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++  +Q L++   +      +       ++K      +  TL +   G   +S  E
Sbjct: 29  GTPLFVTSRQSLVSQYRSFEEAFASLPHFTCYSVKANFNLAVIRTLAEEGCGCDVNSGGE 88

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +                   K          S    I   ++S+L      A+ L K  +
Sbjct: 89  LYRALTAGVPANKIIMAGVGKSEAEIKYGLTSGVMMIKAESISELKAINSVAEHLGKVAQ 148

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCENK 170
           +G+RINP+V+              + G          +         ++GL  H   +  
Sbjct: 149 VGVRINPNVTAETHPYITTGDSKEKFGIDEAGLGEVFELFKTLPNLELHGLDMHIGSQIF 208

Query: 171 SFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               + A  + + +      H    I+W+ LGGG   T        P+  F ++L    +
Sbjct: 209 DPEYYVAATQKLLEVLESARHLGFDIKWLDLGGGFPVTYDPQKPAPPITKFAEKLIPMLQ 268

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDYLLYQESATI 281
              V +  EPG  I  N + + T +L   +N   K   IVD+ +   +   L       +
Sbjct: 269 DKGVTVIFEPGRFIAANASVIVTKILYRKKNQIGKEFFIVDAGMTELIRPALYQSHHEVL 328

Query: 282 YPNTGPYTA--MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                  +    V G  C + D F           G+ ++      Y     + +NG   
Sbjct: 329 SVKQHDRSVVADVVGPICESSDFFARHRTIDDAPEGELLAVLSSGAYGAVMSSNYNGRLR 388

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365
           P   + + D      R  +Y     N
Sbjct: 389 PAEVMVDGDEVTLTRRRETYEQLVQN 414


>gi|222528796|ref|YP_002572678.1| diaminopimelate decarboxylase [Caldicellulosiruptor bescii DSM
           6725]
 gi|222455643|gb|ACM59905.1| diaminopimelate decarboxylase [Caldicellulosiruptor bescii DSM
           6725]
          Length = 433

 Score =  228 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 61/402 (15%), Positives = 124/402 (30%), Gaps = 37/402 (9%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKN---AGVKLLLALKCFAAWGMFDTLNQYMDGTTS 57
           M  TP Y++++  +  N++               ++ A K F    M     +   G   
Sbjct: 28  MYGTPLYVMNETMIRENINIFKTSLNKYFGENGLIIYASKAFCTKAMCQIAKEEGIGLDV 87

Query: 58  SSLYEVMLGHEK-FGGETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDKAQKLH 115
            S  E+       F  +   ++   K  +   + +     I+ +   +L       +  +
Sbjct: 88  VSGGELYTALSVNFDPDKIFFHGNNKTYDELEMAVEKGVKIVLDNFDELEMLSLICRTKN 147

Query: 116 K--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFH 164
           K   + +RI P +           +  S+ G   ++          ++ E  N+ GL  H
Sbjct: 148 KKADVLIRIKPGIEAHTHEFIRTGQIDSKFGVALENGEAFSIVQKVLQKEELNLVGLHCH 207

Query: 165 NNCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
              +      F      ML+ + K       +I+ + LGGG       +      ++  E
Sbjct: 208 IGSQIFETAPFKLAARVMLEFMLKIKNELGYEIKILDLGGGFGIKYTAHDEPPRVEKFIE 267

Query: 221 FSEK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI------VDS 263
              +               I LEPG +IV        T+ ++ E             +  
Sbjct: 268 VITEEVEEFCSLKGLKKPFIVLEPGRSIVGEAGITLYTIGNVKEIPNVRNYVSVDGGMTD 327

Query: 264 SVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323
           +    +                      + GR C +GDI  +      +K G  ++    
Sbjct: 328 NPRYALYQARYDAYVVENPLGQRTKVYTIAGRCCESGDILIKDIKLPELKTGQHLAILAT 387

Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
             YN +  + +N    P + +         ++  +Y D   N
Sbjct: 388 GAYNYSMSSNYNRFPRPAVVLLKNGQARVIVKRETYEDLVKN 429


>gi|254360888|ref|ZP_04977034.1| diaminopimelate decarboxylase [Mannheimia haemolytica PHL213]
 gi|261493013|ref|ZP_05989555.1| diaminopimelate decarboxylase [Mannheimia haemolytica serotype A2
           str. BOVINE]
 gi|153092367|gb|EDN73430.1| diaminopimelate decarboxylase [Mannheimia haemolytica PHL213]
 gi|261311357|gb|EEY12518.1| diaminopimelate decarboxylase [Mannheimia haemolytica serotype A2
           str. BOVINE]
          Length = 416

 Score =  228 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 60/386 (15%), Positives = 118/386 (30%), Gaps = 25/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  +   + + + +   G    S  E
Sbjct: 26  GTPAYVYSRSTLERHWHAFNNAFGSHPHLVCFAVKSNSNIALLNVMARLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +              ++   K       A+          +VS+L++    A +L K   
Sbjct: 86  LERVLAAGGEASKVVFSGVAKSHSEIKRALEVGIRCFNIESVSELHRINQVAGELGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G       E            + G+  H   +  
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVTQAREVYRLAKTLPNVKITGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F         + ++      ++  + LGGG+          +P +     L++   
Sbjct: 206 ELQPFLDATDRLIILMEQLREDGIELHHLDLGGGLGVPYNGEEPPHPTEYAKALLEKLKG 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIY 282
             +++I +EPG AI  N   L T V  + +N      IVD+ +   +   L         
Sbjct: 266 YENLEIIIEPGRAITANAGILVTKVEYLKQNEDRNFAIVDTGMNDMIRPALYEAYMQITE 325

Query: 283 PNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +           V G  C   D  G+      +  GD I+      Y     + +N   
Sbjct: 326 VDKTLNRDKAVYDVVGPICETSDFLGKQRELA-ISEGDLIAIRSAGAYGAAMSSTYNSRP 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364
                + + +         ++ D + 
Sbjct: 385 QAAEIMVDGNQAHLIKARATFADLWR 410


>gi|114566946|ref|YP_754100.1| diaminopimelate decarboxylase [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114337881|gb|ABI68729.1| diaminopimelate decarboxylase [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 441

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 63/399 (15%), Positives = 123/399 (30%), Gaps = 36/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP ++ID++    N           G  ++L A K  A   ++  + Q   G    S  
Sbjct: 33  GTPLWIIDEEGFRRNCRNIKKAFSLYGDSQVLYASKTLATMAIYRIVEQEGLGLDVVSGG 92

Query: 62  EVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+       F  +   ++     ++    A+ +    I+ +   +L        + + + 
Sbjct: 93  ELYTALKAGFPMQKVYFHGNNKSREELRMAICAGVARIVVDNFYELELLNQLCTEENCQQ 152

Query: 119 --GLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNC 167
              LR+ P V           +  S+ G    D          +      + GL  H   
Sbjct: 153 EILLRVTPGVEAHTHEYIQTGQIDSKFGFTLSDGQAMEGVKKALSMPGIKLVGLHCHIGS 212

Query: 168 ENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223
           +  +   F      M+    +       Q+E ++LGGG+             +   +   
Sbjct: 213 QIFAMQSFQYTSSIMMDFWAEIKRTSGCQLEELNLGGGLGIYYVAGDEPRKAEEWAKAVM 272

Query: 224 K-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVP 270
                          +I +EPG AI         T+    E       V     +  +  
Sbjct: 273 PVVQEKARQHGLKVPRIIVEPGRAIAGPAGLTLYTLGSSKEVKGIRKYVAVDGGMTDNPR 332

Query: 271 DYLLYQESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
             L   +   +  N        T  + G+ C +GD+         V+ GD ++      Y
Sbjct: 333 PALYAAKYQALLANKAEEKPVETVSIAGKCCESGDMLIWDLELPWVEAGDILAVLATGAY 392

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           N +  + +N +  P + +         I+  +Y D   N
Sbjct: 393 NYSMSSNYNRLPRPAMVLVKQGQADLIIKRENYEDLLRN 431


>gi|312794090|ref|YP_004027013.1| diaminopimelate decarboxylase [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312181230|gb|ADQ41400.1| diaminopimelate decarboxylase [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 433

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 59/402 (14%), Positives = 124/402 (30%), Gaps = 37/402 (9%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKN---AGVKLLLALKCFAAWGMFDTLNQYMDGTTS 57
           M  TP Y++++  +  N++      +        ++ A K F    M     +   G   
Sbjct: 28  MYGTPLYVMNETMIRENINRFKSSLQKYFGENGLIIYASKAFCTKAMCQIAKEEGIGLDV 87

Query: 58  SSLYEVMLGHEK-FGGETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDKAQKLH 115
            S  E+       F  +   ++   K  +   + +     I+ +   +L       +  +
Sbjct: 88  VSGGELYTALSVNFDPDKIFFHGNNKTYDELEMAVEKGVKIVLDNFDELEMLSLICKTKN 147

Query: 116 K--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFH 164
           K   + +RI P +           +  S+ G   ++          ++ +  ++ GL  H
Sbjct: 148 KKADVLIRIKPGIEAHTHEFIRTGQIDSKFGVALENGEAFSMVQKVLQRQELSLVGLHCH 207

Query: 165 NNCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
              +      F      ML+ + K       Q++ + LGGG       +      ++  E
Sbjct: 208 IGSQIFETAPFKLAARVMLEFMLKIKNELGWQVDILDLGGGFGIKYTAHDEPPKIEKFIE 267

Query: 221 FSEK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI------VDS 263
              +               + LEPG +IV        T+  I E             +  
Sbjct: 268 AIAEEVEEFCSLRGLKKPFVVLEPGRSIVGEAGITLYTIGSIKEIPNVRNYASVDGGMTD 327

Query: 264 SVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323
           +    +                      + GR C +GDI  +      +K G  ++    
Sbjct: 328 NPRYALYQARYDAYVVENPLGQRTKVYTIAGRCCESGDILIKDIKLPELKTGQHLAILAT 387

Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
             YN +  + +N    P + +         ++  +Y D   N
Sbjct: 388 GAYNYSMSSNYNRFPRPAVVLLKNGQARVIVKRETYEDLVRN 429


>gi|205372423|ref|ZP_03225236.1| diaminopimelate decarboxylase [Bacillus coahuilensis m4-4]
          Length = 444

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 58/400 (14%), Positives = 122/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + ++  +  N          +G   ++  A K F    M   + +        S 
Sbjct: 31  GTPLMVYNETVIRQNCREFKQTFDQSGLTYQVAYAGKAFLCMDMVRLVKEEGMSLDVVSG 90

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F  E   ++   K  E   +   +     + +   +L    + A  ++  
Sbjct: 91  GELYTALQAGFPVERIHFHGNNKSVEELEMGIDAGIGCFVVDNFIELELLHELAAEREQK 150

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
             I LR+ P V           +  S+ G    +          ++    ++ G+  H  
Sbjct: 151 VNILLRVTPGVEAHTHDYIMTGQEDSKFGFDVGNGQGKLGVQLALQKPYFHLLGVHSHIG 210

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFC------- 215
            +      F   ++ + +       +    +  +++GGG      +              
Sbjct: 211 SQIFETEGFQYAIEVLARFLQEVHEESDVVMSVLNVGGGFGVRYTEEDEPLPIREYVKSI 270

Query: 216 -QRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269
            + +K    +       I++EPG +IV    T    +              +D  +  ++
Sbjct: 271 TEAVKFSFGQLCYPTPEIWVEPGRSIVAEAGTTLYKIGTQKNLPGIRKYVAIDGGMTDNL 330

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L         A            + G++C +GD+        PV++GD ++      
Sbjct: 331 RPALYKARYDALLANRANEERTEVVSIAGKACESGDMLIWDIALPPVRMGDTLAVFSTGA 390

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N    P +       +   IR  SY D   N
Sbjct: 391 YGYSMANNYNRTPRPAVVFVKEGESRLVIRRESYRDLVRN 430


>gi|300856974|ref|YP_003781958.1| diaminopimelate decarboxylase [Clostridium ljungdahlii DSM 13528]
 gi|300437089|gb|ADK16856.1| diaminopimelate decarboxylase [Clostridium ljungdahlii DSM 13528]
          Length = 428

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 61/399 (15%), Positives = 125/399 (31%), Gaps = 36/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV-KLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           KTP Y++D++ + +         +     K+  A K F    M   +N         S  
Sbjct: 26  KTPLYVMDEELVRDRCRRYYKSFEADKANKVTYAGKAFLTLAMCQIINSEGLYLDVVSDG 85

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLHK 116
           E+    +  F  E   ++   K  +   +         + +   ++ K    A      +
Sbjct: 86  ELYTALKSGFPMEKVYFHGNNKTLDEIDMGVKLGVGKFVVDNFYEMEKINSAAKKYGKIQ 145

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNNC 167
           +I LR+ P +           +  S+ G            K  ++       G+  H   
Sbjct: 146 EILLRVTPGIEAHTHDYIKTGQIDSKFGFTMLNNEVMNIIKSAVDFPNLKFVGIHCHIGS 205

Query: 168 ENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK----------- 212
           +             ML  ++K       ++E + LGGG      +               
Sbjct: 206 QIFETKPYEDEVEIMLNLVKKIKDELGREVEELDLGGGFGIYYTEGDKPKSVEDFCSIIL 265

Query: 213 DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVP 270
              +   +  +     + +EPG +I+ N  T   TV  I         V     +  ++ 
Sbjct: 266 QKAKEKAKELDLKLPILVIEPGRSIIGNAGTTLYTVGSIKNIPGVRKYVSVDGGMADNIR 325

Query: 271 DYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
             L   +   +      ++   T  + G+SC +GDI  +       + GD ++      Y
Sbjct: 326 PALYGAKYECVLANRVNDSVKETVTIAGKSCESGDILIKDVELPESRSGDILAVFTTGAY 385

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
             +  + +N I  P   +          +  +++D   N
Sbjct: 386 GYSMSSNYNKIPKPAAVLVKEGKARLIAKRQTFDDLIEN 424


>gi|303244558|ref|ZP_07330892.1| diaminopimelate decarboxylase [Methanothermococcus okinawensis IH1]
 gi|302485106|gb|EFL48036.1| diaminopimelate decarboxylase [Methanothermococcus okinawensis IH1]
          Length = 438

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 68/400 (17%), Positives = 140/400 (35%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK------LLLALKCFAAWGMFDTLNQYMDGTT 56
            TP Y++ + +++ N    +   K    K      +  A K  +   +   L++   G  
Sbjct: 31  GTPLYVMSESQIVKNFTRYVEAFKEYTEKTGKEFIVGYAYKANSNLAITRLLSKLGCGAD 90

Query: 57  SSSLYEVMLG-HEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQK 113
             S  E+          E   +N   K  +   +    N  +   +++S+L    + A++
Sbjct: 91  VVSGGELYTAKLSNVPSEKIVFNGNCKTKDEIIMGIEANIRSFNVDSISELILINETAKE 150

Query: 114 LHK--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLM 162
           + K   +  RINP+V+             ++ G   +            + E  N+ G+ 
Sbjct: 151 MGKVANVAFRINPNVNPKTHPKISTGLKKNKFGLDVESGIAMKAIKMAKDMENVNIVGVH 210

Query: 163 FHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFC 215
            H   +      F+  +  + +   E      +I+ ++LGGG+        +    KD  
Sbjct: 211 CHIGSQLTDITPFIEETRKVMDFVVELKKEGIKIKDVNLGGGLGIPYDKNTEIPTQKDLA 270

Query: 216 QRLKEFSEKYS-----VQIYLEPGEAIVTNTTTLNTTVLDISENIK-NLVIVDSSVEAHV 269
             +     +Y        + LEPG ++V     L   V  I E      ++VD+ +   +
Sbjct: 271 NAIINTMMEYKDKIELPNLILEPGRSLVATAGVLLGKVHHIKETPVAKWIMVDAGMNDMM 330

Query: 270 PDYLLYQESAT----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              +           I          + G  C + D+FG+      +++ D ++  DV  
Sbjct: 331 RPAMYDAYHEITPCIIRNENKKEVVNIAGGLCESSDVFGKDRELPKIEVNDIVAILDVGA 390

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y I+  N +N    P + + +  G        +Y D  + 
Sbjct: 391 YGISMANNYNARGRPRMILTSEKGVYIIRERETYADLLSK 430


>gi|268680756|ref|YP_003305187.1| carboxynorspermidine decarboxylase [Sulfurospirillum deleyianum DSM
           6946]
 gi|268618787|gb|ACZ13152.1| carboxynorspermidine decarboxylase [Sulfurospirillum deleyianum DSM
           6946]
          Length = 380

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 133/369 (36%), Positives = 204/369 (55%), Gaps = 7/369 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y+ ++  L  NL     + + +G  +LLALK FA   +   ++ Y+ G T S L+
Sbjct: 13  INTPAYVCEEALLEENLKLLKEVSERSGATILLALKGFAFKALAPLVDTYLSGCTCSGLH 72

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E     E F G    Y+ AYK+ +ID V++  + +IFN+ +Q  K+K KA       GLR
Sbjct: 73  EAKFAKEFFKGSVCTYSPAYKEEDIDEVIALSEHLIFNSFNQWEKYKHKAMGKTS-CGLR 131

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP VS S   L +P   +SRLG   ++    +++ + GL FH  CE        A+LK 
Sbjct: 132 LNPEVSSSPVDLYNPCGLYSRLGITKENMQYDKLEGIEGLHFHALCEQD-ADALEAVLKG 190

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTN 240
            E+ FG  I++++WI+ GGG H T + Y V+ F   +++F E+++   +YLEPGEA+   
Sbjct: 191 FEERFGELISRMKWINFGGGHHITREGYDVEKFITLIRDFRERHNDITVYLEPGEAVGWQ 250

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296
           T  L  +VLDI  N  ++ I+D S EAH+PD L     A I         P+   + G +
Sbjct: 251 TGPLVASVLDIVHNGMDIAILDISAEAHMPDTLAMPYRAQIRGAGELGEKPHVYRLGGPT 310

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           CLAGDI G++ F+ P+ IGD++ FED+  Y I +   FNG+ +P +AV   DG  + +  
Sbjct: 311 CLAGDIMGDYTFDAPLHIGDKLIFEDMIHYTIVKNTTFNGVKLPDLAVLRKDGAYEVVSH 370

Query: 357 FSYNDYYNN 365
           F Y++Y   
Sbjct: 371 FGYDEYKRR 379


>gi|193212450|ref|YP_001998403.1| diaminopimelate decarboxylase [Chlorobaculum parvum NCIB 8327]
 gi|193085927|gb|ACF11203.1| diaminopimelate decarboxylase [Chlorobaculum parvum NCIB 8327]
          Length = 431

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 69/386 (17%), Positives = 121/386 (31%), Gaps = 23/386 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++  +Q L++                  ++K      +  TL     G   +S  E
Sbjct: 44  GTPLFVTSRQSLISQYRAFEEAFAALPHFTCYSVKANFNLEVIRTLAAEGCGCDVNSGGE 103

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHK--K 117
           +          E        K  E      N     I   + ++L      A +L K  +
Sbjct: 104 LYRALKAGVPAEKIIMAGVGKTEEEIEYGLNSGVMMIKAESTAELKAINRVAARLGKVAQ 163

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCENK 170
           +G+R+ P+V+              + G                    ++GL  H   +  
Sbjct: 164 VGVRVTPNVTAETHPYITTGDSKEKFGIDEAGLAEVFDLFKALTNLELHGLDMHIGSQIF 223

Query: 171 SFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               + A  + + +      H    I+W+ LGGG   T        P+  F ++L    +
Sbjct: 224 DPEYYVAATQKLLEVLESARHLGFDIKWLDLGGGFPATYDPQKPATPITKFAEKLIPMLD 283

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDYLLYQESA-- 279
              V +  EPG  I  N++ L T +L   +N   K   IVD+ +   +   L        
Sbjct: 284 DKGVTVIFEPGRFIAANSSVLVTKILYRKKNHAGKEFFIVDAGMTELIRPALYQSHHEVL 343

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
           T+  +     A V G  C + D F           G+ ++      Y       +NG   
Sbjct: 344 TVKQHDKSVVADVVGPVCESSDFFVRHRTIGDAPEGELLAVLSSGAYGAVMGTNYNGRRR 403

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365
           P   + +        R  +Y     N
Sbjct: 404 PAEVMVDGSEAKLIRRRETYEQLVQN 429


>gi|157738336|ref|YP_001491020.1| diaminopimelate decarboxylase [Arcobacter butzleri RM4018]
 gi|157700190|gb|ABV68350.1| diaminopimelate decarboxylase [Arcobacter butzleri RM4018]
          Length = 402

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 64/383 (16%), Positives = 124/383 (32%), Gaps = 21/383 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TPYY+ D   + N  +      +     +  A+K  +   +   L     G    S+ E
Sbjct: 13  QTPYYVYDFNYITNQYEELKSAFRARKSLIAYAVKANSNLSVIKHLANLGAGADCVSIGE 72

Query: 63  VMLGHE-KFGGETHAYNV-AYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIG 119
           V    +         ++     D EI   L      I   + ++L + +  A++L K   
Sbjct: 73  VKRALKVGIPSYKIIFSGVGKIDDEIRQALELDILMINVESDAELQRVEIIAKELGKVAR 132

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNC--- 167
           +  R+NP++              ++ G          I+          G+  H      
Sbjct: 133 ISIRVNPNIDPKTHPYISTGLHENKFGVDIDTAKRMYIQCKNSDFLDPVGIHCHIGSQLT 192

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
           E +       ++ ++ +       ++ +I +GGG+    KD       ++ Q + E    
Sbjct: 193 ELQPIKEAVKIVADLVRNLKAIKIELSFIDIGGGLGIIYKDEKLIDTYEYAQSILETMFG 252

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLL--YQESATI 281
             + I  EPG  I+ N+    T VL       K  VIVD ++   +   L   Y     +
Sbjct: 253 LDITIICEPGRFIIGNSGIFVTKVLYEKINGNKRFVIVDGAMNDLIRPALYNAYHRIEVL 312

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
             N       + G  C +GD F +       +  D ++      Y     + +N      
Sbjct: 313 NDNQDFSDCNLVGPVCESGDFFAKNIQLPKTEHNDLVAIYSAGAYGFTMSSNYNTRGKVA 372

Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364
                        +  ++ D   
Sbjct: 373 EIAIEDGKDRLIRKRETFEDLIA 395


>gi|222099950|ref|YP_002534518.1| Diaminopimelate decarboxylase [Thermotoga neapolitana DSM 4359]
 gi|221572340|gb|ACM23152.1| Diaminopimelate decarboxylase [Thermotoga neapolitana DSM 4359]
          Length = 395

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 59/375 (15%), Positives = 118/375 (31%), Gaps = 17/375 (4%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  ++ +         +     +    A+K      +   L +   G    +  E
Sbjct: 21  GTPLYVYFEETIRERARRVKEVFHGINLLPTFAVKANNNPNLLAILKEEGFGMDVVTKGE 80

Query: 63  VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +              +N   K  +  +  +     TI  ++  ++  ++  + +      
Sbjct: 81  LFAARLAGVDPFLIVWNGNGKSKEEMLHFLKEGVRTINVDSFEEMEMWESLSPE-DVNFF 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFHNNCENKSFLCF 175
           +R+NP V               + G                N+ GL  H   +      F
Sbjct: 140 VRVNPEVDARTHPHISTGLKKHKFGIPLNMLDSFMKRFKGMNIKGLHVHIGSQITKVDPF 199

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE-FSEKYSVQIYLEPG 234
               + + +    +    E I++GGG     +   +     R K         ++++E G
Sbjct: 200 LEAYEKVVEASRRYG--FEEINIGGGWGIDYQGEELNVQEYREKVVPLLDGFKRVFVEIG 257

Query: 235 EAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP---YTA 290
             I+     L   V+ +     K  V+VD  +   +    LY     I+        + A
Sbjct: 258 RYIIAPAGFLVLKVILVKRGENKVFVVVDGGMNTLIRPA-LYSAHHRIFVYGKEGSDFKA 316

Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGT 350
            V G  C +GD+         V+ GD +  E+   Y     N +N  + P   +   DG 
Sbjct: 317 DVVGPLCESGDVIAYDRNLPAVEPGDFLFVENAGAYGYTMANNYNSTSKPAEVLVKKDGE 376

Query: 351 -IKAIREFSYNDYYN 364
            +   R  +  D + 
Sbjct: 377 LVLIRRRENIMDIFK 391


>gi|134096284|ref|YP_001101359.1| diaminopimelate decarboxylase [Herminiimonas arsenicoxydans]
 gi|133740187|emb|CAL63238.1| Diaminopimelate decarboxylase (DAP decarboxylase) [Herminiimonas
           arsenicoxydans]
          Length = 427

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 59/397 (14%), Positives = 124/397 (31%), Gaps = 36/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG-----VKLLLALKCFAAWGMFDTLNQYMDGTTS 57
            +P Y+  K  L+ N  +     K  G       +  ++K  +   +   L +   G   
Sbjct: 26  GSPTYIYSKAALVENFSSYADACKKHGRTDDTALVCYSVKSNSNLAVLQLLGKLGSGFDI 85

Query: 58  SSLYEVMLGHE--KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--Q 112
            S  E++          +     V   ++    A+  +       ++ +L++  + A   
Sbjct: 86  VSGGELLRVLAAGGSPRKVIFSGVGKSREEMQLALSHDILCFNVESIPELHRLNEVAGEM 145

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHN 165
                + LR+NP+V              ++ G   +D + +           V G+  H 
Sbjct: 146 GKRASVSLRVNPNVDAKTHPYISTGLKDNKFGVAYEDALTTYRVASALPNISVVGIDCHI 205

Query: 166 NCENKSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKD--------YPVKDF 214
             +          +  +             I  + +GGGI     +        Y  + F
Sbjct: 206 GSQLLDDAPLLEAVDKLIELIDALAAEGIVIHHLDIGGGIGINYDNDKPVAVGDYLARVF 265

Query: 215 CQRLKEFSEKYSVQIY---LEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVP 270
            +     ++ ++        EPG +IV N   L T V  I     KN  IVD+++   + 
Sbjct: 266 AKVDAWRAKNHAGAPIKVLFEPGRSIVGNAGILLTEVQYIKHGETKNFAIVDAAMNDLMR 325

Query: 271 DYLLYQES---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
             +          +  +    T  V G  C +GD          ++ GD ++      Y 
Sbjct: 326 PAMYEAWHGVQPVLQRHVAAQTYDVVGPVCESGDWLARSRELA-IQEGDLLAIMSAGAYG 384

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +   + +N        + +        +    +D + 
Sbjct: 385 MTMSSNYNTRGRAAEVMVDGATVHLIRKRELASDLFA 421


>gi|51247766|pdb|1TWI|A Chain A, Crystal Structure Of Diaminopimelate Decarboxylase From M.
           Jannaschii In Co-Complex With L-Lysine
 gi|51247767|pdb|1TWI|B Chain B, Crystal Structure Of Diaminopimelate Decarboxylase From M.
           Jannaschii In Co-Complex With L-Lysine
 gi|51247768|pdb|1TWI|C Chain C, Crystal Structure Of Diaminopimelate Decarboxylase From M.
           Jannaschii In Co-Complex With L-Lysine
 gi|51247769|pdb|1TWI|D Chain D, Crystal Structure Of Diaminopimelate Decarboxylase From M.
           Jannaschii In Co-Complex With L-Lysine
          Length = 434

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 72/398 (18%), Positives = 136/398 (34%), Gaps = 35/398 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN------AGVKLLLALKCFAAWGMFDTLNQYMDGTT 56
            TP Y++ ++++  N +  +   K           +  A K  A   +   L +   G  
Sbjct: 29  GTPLYVMSEEQIKINYNRYIEAFKRWEEETGKEFIVAYAYKANANLAITRLLAKLGCGAD 88

Query: 57  SSSLYEVMLG-HEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQK 113
             S  E+ +        +   +N   K  E   +    N      +++S+L    + A++
Sbjct: 89  VVSGGELYIAKLSNVPSKKIVFNGNCKTKEEIIMGIEANIRAFNVDSISELILINETAKE 148

Query: 114 L--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLM 162
           L     +  RINP+V+             ++ G   +           +E E  NV G+ 
Sbjct: 149 LGETANVAFRINPNVNPKTHPKISTGLKKNKFGLDVESGIAMKAIKMALEMEYVNVVGVH 208

Query: 163 FHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ--- 216
            H   +      F+  +  + +   E      +IE ++LGGG+             +   
Sbjct: 209 CHIGSQLTDISPFIEETRKVMDFVVELKEEGIEIEDVNLGGGLGIPYYKDKQIPTQKDLA 268

Query: 217 ------RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHV 269
                  LK   +     + LEPG ++V     L   V  I E      V++D+ +   +
Sbjct: 269 DAIINTMLKYKDKVEMPNLILEPGRSLVATAGYLLGKVHHIKETPVTKWVMIDAGMNDMM 328

Query: 270 PDYLLYQESATIYPNTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
              +       I            + G  C + D+FG       V++GD ++  DV  Y 
Sbjct: 329 RPAMYEAYHHIINCKVKNEKEVVSIAGGLCESSDVFGRDRELDKVEVGDVLAIFDVGAYG 388

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           I+  N +N    P + + +  G        +Y D    
Sbjct: 389 ISMANNYNARGRPRMVLTSKKGVFLIRERETYADLIAK 426


>gi|154151636|ref|YP_001405254.1| diaminopimelate decarboxylase [Candidatus Methanoregula boonei 6A8]
 gi|154000188|gb|ABS56611.1| diaminopimelate decarboxylase [Methanoregula boonei 6A8]
          Length = 430

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 62/391 (15%), Positives = 126/391 (32%), Gaps = 31/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+  + ++  +            A V++L A K      +   L +   G    S 
Sbjct: 29  GTPLYVTSEDRICEHFTAYQSALSRRYAKVQVLFAAKANGNLAVMRALARLGAGADVFSS 88

Query: 61  YEVMLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116
            E+ L  E         +N  +    ++   + +   +  +++ +L++    A    K  
Sbjct: 89  GELALALEAGMPASKLLFNGSSKTPADLALAVKHGVKVSLDSLDELHQLDAIAANAGKVA 148

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV-------NGLMFHNNCEN 169
           +I  R+NP++              S+ G   +    +  + +        G+  H   + 
Sbjct: 149 EISFRVNPALEVPTHPKIATGLATSKFGIPHEQIPAAYKEALACKNVKPVGIHCHIGSQI 208

Query: 170 KSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVK-----DFCQRLKEF 221
              + F+   + +    KE      ++E++ LGGG+               D+   +   
Sbjct: 209 LDVVPFARAAEVMVRIAKEISDIGVKLEFLDLGGGLGIPYHHDTDPAPTPEDYAAAVMPV 268

Query: 222 SEK------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY 275
             +       +  +++EPG  +V ++T L T V       K    VD+     +   +  
Sbjct: 269 FLEGIEKAGITPSLWVEPGRFLVADSTVLLTRVNSTKAAHKRFANVDAGFNLLIRPAMYD 328

Query: 276 QESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                I  N           + G  C  GDI         +  GD I+  D   Y     
Sbjct: 329 SYHEIIVANRADAPHTTEYTITGPICETGDILAADRKLPELAAGDLIAVLDAGAYGYAMS 388

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
           + +NG       + +        R  +  D 
Sbjct: 389 SQYNGRPRCPEILIHGKEETLMRRPETLADL 419


>gi|256810722|ref|YP_003128091.1| diaminopimelate decarboxylase [Methanocaldococcus fervens AG86]
 gi|256793922|gb|ACV24591.1| diaminopimelate decarboxylase [Methanocaldococcus fervens AG86]
          Length = 436

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 72/398 (18%), Positives = 133/398 (33%), Gaps = 35/398 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN------AGVKLLLALKCFAAWGMFDTLNQYMDGTT 56
            TP Y++ ++++  N +  +   K           +  A K  A   +   L++   G  
Sbjct: 31  GTPLYVMSEEQIKINYNKYIEAFKRWEEETGKEFIVAYAYKANANLAITKLLSKLGCGAD 90

Query: 57  SSSLYEVMLG-HEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQK 113
             S  E+ +        E   +N   K  E   +    N      +++S+L    + A++
Sbjct: 91  VVSGGELYIAKLSNVPSEKIVFNGNCKTKEEIIMGIEANIRAFNVDSISELILINETAKE 150

Query: 114 LHK--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLM 162
           L K   +  RINP+V              ++ G   +           +E +  NV G+ 
Sbjct: 151 LGKVANVAFRINPNVDPKTHPKISTGLKKNKFGLDVESGIALKAIKMALEMDNVNVVGVH 210

Query: 163 FHNNCENKSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKDYPVKDFCQ--- 216
            H   +      F    + +            +I  ++LGGG+    +        +   
Sbjct: 211 CHIGSQLTDVSPFIEATEKVMDFVVKLKEEGIEIRDVNLGGGLGIPYEKDKKVPTQKDLA 270

Query: 217 ------RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHV 269
                  LK   +     + LEPG ++V     L   V  I E      V+VD+ +   +
Sbjct: 271 DAIINTMLKYKDKVEMPNLILEPGRSLVATAGYLLGRVHHIKETPITKWVMVDAGMNDMM 330

Query: 270 PDYLLYQESATIYPNTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
              +       I            + G  C + D+FG        ++GD ++  DV  Y 
Sbjct: 331 RPAMYDAYHHIINCKVKDEKEVVSIAGGLCESSDVFGRDREIDKPEVGDVLAIFDVGAYG 390

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           I+  N +N    P + + +  G        SY D    
Sbjct: 391 ISMANNYNARGRPRMVLTSKKGVFLIRERESYADLIAK 428


>gi|194334306|ref|YP_002016166.1| diaminopimelate decarboxylase [Prosthecochloris aestuarii DSM 271]
 gi|194312124|gb|ACF46519.1| diaminopimelate decarboxylase [Prosthecochloris aestuarii DSM 271]
          Length = 416

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 67/385 (17%), Positives = 126/385 (32%), Gaps = 23/385 (5%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP +++ +  L+           +       ++K      +   L+    G   +S  E+
Sbjct: 30  TPLFVVSRNALVEQYRAFEEAFSSLSHFTCYSVKANFNIHVIKALSDQGCGCDVNSGGEL 89

Query: 64  MLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIF--NTVSQLNKFKDKAQKL--HKKI 118
                     +        K  +           +    ++S+L   +  A++L     +
Sbjct: 90  FRALKAGVDPQKIIMAGVGKSDQDIEYALQSGIFMLKAESLSELRHIEAVARRLGVTASV 149

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK-----IESEIKNVNGLMFHNNCENKSFL 173
           G+RINP+V+              + G           +   +K+VN +    +  ++ F 
Sbjct: 150 GVRINPNVTAETHPYITTGDSKEKFGIDEGSLDEMFDLFKSMKHVNFMCLDMHIGSQIFD 209

Query: 174 CFSAMLK-----NIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK 224
                       ++          I+++ +GGG   T +      P++ F   L    +K
Sbjct: 210 TEFYHAATEKLLDVLDAARAKGFSIDYLDIGGGFPVTYEPQKPATPIEQFASVLIPVLKK 269

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDYLL--YQESAT 280
               I  EPG  I  N+  + T VL    N   K  VIVD+ +   +   L   Y E   
Sbjct: 270 TGTTIIFEPGRFIAANSGVMVTKVLYRKRNHIGKEFVIVDAGMTELIRPALYQSYHEIIG 329

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
           +        A V G  C +GD F        V  G+ ++      Y     N +NG   P
Sbjct: 330 VKQQEATIVADVVGPVCESGDFFARGRTIDAVGEGEYLAILSAGAYGAVMSNNYNGRLRP 389

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + +   T    +  ++     N
Sbjct: 390 AEVMVDNGRTSLIRKRDTFEQLIEN 414


>gi|182418166|ref|ZP_02949466.1| diaminopimelate decarboxylase [Clostridium butyricum 5521]
 gi|237666166|ref|ZP_04526153.1| diaminopimelate decarboxylase [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182377984|gb|EDT75524.1| diaminopimelate decarboxylase [Clostridium butyricum 5521]
 gi|237658256|gb|EEP55809.1| diaminopimelate decarboxylase [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 431

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 65/400 (16%), Positives = 122/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P Y+ D++ +             +    ++  A K F    M   L +        S 
Sbjct: 29  GSPLYVFDEELIREYCRDYRNYFRCEENNNRVAFAGKAFLTVQMCKLLKEENMSLDVVSG 88

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F  E   ++   K  +     V       + +   ++    D A      
Sbjct: 89  GELYTAYKAGFPLERVMFHGNNKTLDEIELGVKLGVGNFVVDNHYEMEVLNDIAKSYGKT 148

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           + I LRI P +           +  S+ G         +  +  I  E  N+ G+  H  
Sbjct: 149 QNIYLRITPGIEAHTHDYIKTGQIDSKFGFAPVGTVIEDAVEKAINLENINLAGIHCHIG 208

Query: 167 CENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---------- 212
            +      +      ML  ++K   +    I+ +  GGG                     
Sbjct: 209 SQIFELQPYEDAVEVMLALVKKIQENHGYFIKEVDFGGGFGIYYNKGDKPRTTREYCETI 268

Query: 213 -DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            +    +   + +    + +EPG +IV N  +   TV  + E       V     +  ++
Sbjct: 269 INKVDEVCRRTGQERPILTIEPGRSIVANAGSTLYTVGSVKEIPGVRTYVAVDGGMTDNI 328

Query: 270 PDYLLYQESATI----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      + G  T  + G+ C +GDI  E      V  GD ++      
Sbjct: 329 RPALYNSAYECVIANRVNSEGGQTVTIAGKCCESGDILLENVELPEVTSGDILAILTTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  + +N I  P + +          +  SY D   N
Sbjct: 389 YGYSMSSNYNRIPKPAVVMIRDGQARLVCKRESYEDIIRN 428


>gi|254780371|ref|YP_003064784.1| diaminopimelate decarboxylase protein [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040048|gb|ACT56844.1| diaminopimelate decarboxylase protein [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 431

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 63/389 (16%), Positives = 119/389 (30%), Gaps = 25/389 (6%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           +++TP+Y      +  N  T           +  ALK  +   +  TL     G    S 
Sbjct: 24  VVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVSE 83

Query: 61  YEVMLGHEK-FGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+          E   ++   K  D    A+ S        + S+L     +A  L   
Sbjct: 84  GELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKK 143

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCE 168
             I  R+NP ++ +        +   + G                    ++G+  H   +
Sbjct: 144 APIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQ 203

Query: 169 NKSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKD----FCQRLKEF 221
                 F    K +    ++       I+ I +GGG+               +   + ++
Sbjct: 204 IDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHRPPSSSDYASLIHQY 263

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL--YQES 278
                 +I LEPG  +V +   L T V+ I ++     ++ D ++   +   L   Y E 
Sbjct: 264 FGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYDAYHEI 323

Query: 279 ATIYPNTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
             I    G      A + G  C  GD           + GD +  E    Y   +   +N
Sbjct: 324 NYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQSGTYN 383

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    + N           ++ +   
Sbjct: 384 SRLLIPEIMVNGSQFHIIRPRMTFQELIE 412


>gi|154245684|ref|YP_001416642.1| diaminopimelate decarboxylase [Xanthobacter autotrophicus Py2]
 gi|154159769|gb|ABS66985.1| diaminopimelate decarboxylase [Xanthobacter autotrophicus Py2]
          Length = 422

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 59/389 (15%), Positives = 115/389 (29%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TP+Y      L  +    +       V L  ALK  +   +  TL +   G    S  
Sbjct: 25  VRTPFYCYSSATLERHYQVFMEAFSGRDVLLCYALKANSNQSVIATLARLGAGADIVSAG 84

Query: 62  EVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E+          E   ++     ++    A+          +  +L    + A  +    
Sbjct: 85  ELARARAAGVPAERIVFSGVGKTREEMAAALDGGILCFNVESEPELAALSEVATAMGVSA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            + +R+NP V           +  ++ G       E            + G+  H   + 
Sbjct: 145 PVSIRVNPDVDAKTHKKISTGKSATKFGIPISRAREVYDYAARLPGLAITGVDMHIGSQI 204

Query: 170 K---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK-----DYPVKDFCQRLKEF 221
                F     +L  + ++      ++  + LGGG+            P   + + +   
Sbjct: 205 TDMAPFDNAVTLLAELARDLLAAGHRLHHMDLGGGLGVPYAASDPVPPPPSAYAEVVSRA 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                + +  E G  +V N   L T V+ + E   K  V+VD+++   +   L       
Sbjct: 265 LGDLKLPLVFEMGRMLVANAGILVTRVIYVKEGEGKTFVVVDAAMNDLIRPTLYEAHHDI 324

Query: 281 IYPNTGPYTAM-----VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           I        A      V G  C  GD          +K GD ++      Y   + + +N
Sbjct: 325 IPVVEPAADAPLVVADVVGPVCETGDFLALDRPLPRLKAGDLLAVMTAGAYGAVQASTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    +                D   
Sbjct: 385 TRPLVPEVLVRGAAAAVVRPRLEVADLIA 413


>gi|312129772|ref|YP_003997112.1| diaminopimelate decarboxylase [Leadbetterella byssophila DSM 17132]
 gi|311906318|gb|ADQ16759.1| diaminopimelate decarboxylase [Leadbetterella byssophila DSM 17132]
          Length = 419

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 57/386 (14%), Positives = 118/386 (30%), Gaps = 26/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D   +   ++      K   +K+  A K      +   + +        S  E
Sbjct: 31  GTPLYVYDGDVIAAKVERLRAAFKEVNMKIKYACKANTNISVLALMKKLGVDIDVVSPQE 90

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           + L     F  E   +  +    +      N    +  + +S L KF  K         +
Sbjct: 91  MKLALSAGFSPEQITFTSSGVGFDEIEACVNEGVLVNIDNLSTLEKFGQKYGSSLPVF-I 149

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKSFLC 174
           RI P+V+             S+ G   +        +      + GL  H   + K    
Sbjct: 150 RIRPNVAGGGNEKISTGHGNSKFGIPIEQKGEILKLVNKYQLRIVGLHQHTGSDIKDGST 209

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF--------CQRLKEFSEKYS 226
           F    + +  E       ++++  GGG     K+  V+            R K F   Y 
Sbjct: 210 FVQAAEVM-FELAKDFDNLQYLDFGGGFKVPYKEGDVETDMEDLGVQLSARFKAFCASYG 268

Query: 227 VQI--YLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP 283
            ++  + EPG+ +V+ +  L  +V  +  N    ++  ++ +   +   +          
Sbjct: 269 RELELWFEPGKYLVSESGLLLASVNVVKNNPNGTLLGLNTGLNHLIRPMMYDAYHGVYNI 328

Query: 284 NTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
           +           + G  C   D   +       + GD ++  +   Y     + +N    
Sbjct: 329 SKAKEEASKRYNIVGYMCETDD-IAKDRTLPETEEGDIMAIRNAGAYGFTMASNYNSRFR 387

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365
           P   +     +    +  +  D   N
Sbjct: 388 PAEVLYYQGKSHLVRKRETMEDILKN 413


>gi|302389700|ref|YP_003825521.1| diaminopimelate decarboxylase [Thermosediminibacter oceani DSM
           16646]
 gi|302200328|gb|ADL07898.1| diaminopimelate decarboxylase [Thermosediminibacter oceani DSM
           16646]
          Length = 442

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 65/400 (16%), Positives = 125/400 (31%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++D+  +  N         +      ++ A K F    M   + Q        S 
Sbjct: 29  GTPLYVMDESHIRQNCRLYRETLNSLHPDSGVIYAGKAFLTMNMCRIVEQEGLYLDVVSG 88

Query: 61  YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK- 116
            E+ +     F  E   ++   K  +    A+  N   I+ +   ++    D  +KL   
Sbjct: 89  GELYVAIKAGFPAEKIYFHGNNKSYEELKMAIDYNVGHIVVDNFHEMEMLNDLTKKLRHR 148

Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I LRI+P +           +  S+ G               +  +   + G   H  
Sbjct: 149 VNILLRISPGIEAHTHDYIKTGQLDSKFGFGLENGQAMMAVDRALGIKGVRLVGFHCHIG 208

Query: 167 CENKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F    + + K        F   I  +  GGG      +              
Sbjct: 209 SQIFETEPFELAAELMMKFVKSVKSRFGHGIRQLDFGGGFGVKYTEEDKPLHPREYLMTL 268

Query: 215 CQRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            + +K ++ + +    +I +EPG AIV        T+  I +       V     +  ++
Sbjct: 269 VESVKRWARELNVAVPRILVEPGRAIVGPAGITLYTIGAIKDIPGVRKYVSVDGGISDNI 328

Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L     + +  N        T  + G+ C +GD+         V  GD ++      
Sbjct: 329 RPALYGARYSAVLANKAGMPVEETVSIAGKCCESGDMLIWDIKLPRVSTGDILAVFCTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y+ +  + +N I  P +           ++  +Y D   N
Sbjct: 389 YHYSMASNYNMIPRPAVVFVRDGIARLVVKRETYKDLLRN 428


>gi|154252052|ref|YP_001412876.1| diaminopimelate decarboxylase [Parvibaculum lavamentivorans DS-1]
 gi|154156002|gb|ABS63219.1| diaminopimelate decarboxylase [Parvibaculum lavamentivorans DS-1]
          Length = 422

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 61/385 (15%), Positives = 121/385 (31%), Gaps = 26/385 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP+Y      L  + +      K    ++  ++K  +   +  TL +   G    S  
Sbjct: 25  IGTPFYCYSSATLERHYEVFAGAFKGQPARVCYSVKANSNLAVIATLARLGAGADVVSEG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK--LHK 116
           E+          E   ++   K     A    +  D     +  +L    + A    L  
Sbjct: 85  ELRRALAAGIPAEKIVFSGVGKTEAEMAFALETGIDQFNVESEPELELLAELAAARGLTA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCEN 169
           ++ +R+NP V           +  ++ G   K          E +     G+  H   + 
Sbjct: 145 QVAIRVNPDVDAKTHEKIATGKAENKFGISWKRAPAVYARARELKGVKACGIDVHIGSQL 204

Query: 170 KSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221
            +   F+A  + +            +I  I LGGG+    +          ++   +K  
Sbjct: 205 TALEPFAAAFERVAGMVEALRAEGHEITHIDLGGGLGIPYRGDNDVPPHPDEYAAMVKRT 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESAT 280
                 ++  EPG  I  N   L + V+   +      +IVD+++   +   L       
Sbjct: 265 IGHLGCELTFEPGRLIAGNAGILVSRVIYEKQGDDRAFLIVDAAMNDLIRPTLYDAFHDI 324

Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                        +  V G  C  GD F +      +K GD ++      Y+  + + +N
Sbjct: 325 RPVTEPAEGAARVSYDVVGPVCETGDFFAKARELPRLKSGDLVAIMSAGAYSAVQASTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYN 360
              +    +       +     SY+
Sbjct: 385 TRPLVPEVMVKGATFQEVRARPSYD 409


>gi|302871382|ref|YP_003840018.1| diaminopimelate decarboxylase [Caldicellulosiruptor obsidiansis
           OB47]
 gi|302574241|gb|ADL42032.1| diaminopimelate decarboxylase [Caldicellulosiruptor obsidiansis
           OB47]
          Length = 433

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 63/402 (15%), Positives = 125/402 (31%), Gaps = 37/402 (9%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKN---AGVKLLLALKCFAAWGMFDTLNQYMDGTTS 57
           M  TP Y++++  +  N++      +        ++ A K F    M     +   G   
Sbjct: 28  MYGTPLYVMNETMIRENINRFKSSLQKYFGENGLIIYASKAFCTKAMCRIAKEEGIGLDV 87

Query: 58  SSLYEVMLGHEK-FGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            S  E+       F  +   ++       E++  +     I+ +   +L+      +  +
Sbjct: 88  VSGGELYTALSVNFEPDKIFFHGNNKVYDELEMAVDKGVKIVLDNFDELDMLSLICKTKN 147

Query: 116 K--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFH 164
           K   + +RI P +           +  S+ G   ++          ++ E  N+ GL  H
Sbjct: 148 KKADVLIRIKPGIEAHTHEFIRTGQIDSKFGVALENGEAFSMVQKVLQKEELNLIGLHCH 207

Query: 165 NNCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
              +      F      ML+ + K       +IE + LGGG       +      ++  E
Sbjct: 208 IGSQIFETAPFKLAARVMLEFMLKLKNELGCEIEILDLGGGFGIKYTAHDEPPKIEKFIE 267

Query: 221 FSEK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI------VDS 263
              +               I LEPG +IV        T+  I E             +  
Sbjct: 268 AIAEEVEEFCSLRGLKKPFIVLEPGRSIVGEAGITLYTIGSIKEIPNVRNYASVDGGMTD 327

Query: 264 SVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323
           +    +                      + GR C +GDI  +      +K G  ++    
Sbjct: 328 NPRYALYQARYDAYVVENPLGERTKVYTIAGRCCESGDILIKDIKLPELKTGQHLAILAT 387

Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
             YN +  + +N    P + +         ++  +Y D   N
Sbjct: 388 GAYNYSMSSNYNRFPRPAVVLLKNGQAKVIVKRETYEDLVRN 429


>gi|15669285|ref|NP_248090.1| diaminopimelate decarboxylase LysA [Methanocaldococcus jannaschii
           DSM 2661]
 gi|2499349|sp|Q58497|DCDA_METJA RecName: Full=Diaminopimelate decarboxylase; Short=DAP
           decarboxylase
 gi|1591741|gb|AAB99100.1| diaminopimelate decarboxylase (lysA) [Methanocaldococcus jannaschii
           DSM 2661]
          Length = 438

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 72/398 (18%), Positives = 136/398 (34%), Gaps = 35/398 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN------AGVKLLLALKCFAAWGMFDTLNQYMDGTT 56
            TP Y++ ++++  N +  +   K           +  A K  A   +   L +   G  
Sbjct: 33  GTPLYVMSEEQIKINYNRYIEAFKRWEEETGKEFIVAYAYKANANLAITRLLAKLGCGAD 92

Query: 57  SSSLYEVMLG-HEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQK 113
             S  E+ +        +   +N   K  E   +    N      +++S+L    + A++
Sbjct: 93  VVSGGELYIAKLSNVPSKKIVFNGNCKTKEEIIMGIEANIRAFNVDSISELILINETAKE 152

Query: 114 L--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLM 162
           L     +  RINP+V+             ++ G   +           +E E  NV G+ 
Sbjct: 153 LGETANVAFRINPNVNPKTHPKISTGLKKNKFGLDVESGIAMKAIKMALEMEYVNVVGVH 212

Query: 163 FHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ--- 216
            H   +      F+  +  + +   E      +IE ++LGGG+             +   
Sbjct: 213 CHIGSQLTDISPFIEETRKVMDFVVELKEEGIEIEDVNLGGGLGIPYYKDKQIPTQKDLA 272

Query: 217 ------RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHV 269
                  LK   +     + LEPG ++V     L   V  I E      V++D+ +   +
Sbjct: 273 DAIINTMLKYKDKVEMPNLILEPGRSLVATAGYLLGKVHHIKETPVTKWVMIDAGMNDMM 332

Query: 270 PDYLLYQESATIYPNTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
              +       I            + G  C + D+FG       V++GD ++  DV  Y 
Sbjct: 333 RPAMYEAYHHIINCKVKNEKEVVSIAGGLCESSDVFGRDRELDKVEVGDVLAIFDVGAYG 392

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           I+  N +N    P + + +  G        +Y D    
Sbjct: 393 ISMANNYNARGRPRMVLTSKKGVFLIRERETYADLIAK 430


>gi|298293363|ref|YP_003695302.1| diaminopimelate decarboxylase [Starkeya novella DSM 506]
 gi|296929874|gb|ADH90683.1| diaminopimelate decarboxylase [Starkeya novella DSM 506]
          Length = 422

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 58/381 (15%), Positives = 115/381 (30%), Gaps = 26/381 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +         +A   L  ALK  +   +  T  +   G    S  
Sbjct: 25  VGTPFYAYSTATLERHYKVFTEAFADARATLCYALKANSNQAVIATFAKLGAGADIVSGG 84

Query: 62  EVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116
           E+              ++     ++    A+ +        +  +L    + A    +  
Sbjct: 85  ELKRALAAGIAPHKIVFSGVGKTREEMAAALDAGVMCFNVESEPELLTLSEVAVSHGVAA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            I +R+NP V           +  ++ G       E            + G+  H   + 
Sbjct: 145 PISVRVNPDVDAKTHHKISTGKSENKFGIPISRAREVYRHAAALPGIRITGVDMHIGSQI 204

Query: 170 KSFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVK-----DFCQRLKEF 221
                F         + ++      ++  + LGGG+         +      + + +K  
Sbjct: 205 TDLTPFDNATALLVELARDLMADGHRLTHLDLGGGLGVPYVAGDPEPPLPLHYAELVKRH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
           +    + +  E G  +V N   L T VL + E   K  VIVD+++   +   L       
Sbjct: 265 THNLGLGLVFEIGRMLVANAGILVTRVLYVKEGEGKRFVIVDAAMNDLIRPTLYDAHHEI 324

Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +             A V G  C +GD         P+K GD ++      Y   + + +N
Sbjct: 325 LPVREAKSGEGQIVADVVGPVCESGDFLALGRRLPPLKAGDLVAVMTTGAYGAVQASTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIRE 356
              +    +   +        
Sbjct: 385 TRPLVPEVLVKGEQFALVRPR 405


>gi|312134674|ref|YP_004002012.1| diaminopimelate decarboxylase [Caldicellulosiruptor owensensis OL]
 gi|311774725|gb|ADQ04212.1| diaminopimelate decarboxylase [Caldicellulosiruptor owensensis OL]
          Length = 433

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 63/402 (15%), Positives = 125/402 (31%), Gaps = 37/402 (9%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKN---AGVKLLLALKCFAAWGMFDTLNQYMDGTTS 57
           +  TP Y++++  +  N++      +        ++ A K F    M     +   G   
Sbjct: 28  VYGTPLYVMNETMIRENINRFKSSLQKYFGENGLIIYASKAFCTKAMCRIAKEEGIGLDV 87

Query: 58  SSLYEVMLGHEK-FGGETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDKAQKLH 115
            S  E+       F      ++   K  +   + +     I+ +   +L+      +  +
Sbjct: 88  VSGGELYTALSVNFEPNKIFFHGNNKTYDELEMAVDKGVKIVLDNFDELDMLSLICKTKN 147

Query: 116 K--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFH 164
           K   + +RI P +           +  S+ G   ++          ++ E  N+ GL  H
Sbjct: 148 KKADVLIRIKPGIEAHTHEFIRTGQIDSKFGVALENGEAFSMVQKVLQKEELNLVGLHCH 207

Query: 165 NNCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
              +      F      ML+ + K       +IE + LGGG       +      ++  E
Sbjct: 208 IGSQIFETAPFKLAARVMLEFMLKLKNELGCEIEILDLGGGFGIKYTAHDEPPRIEKFIE 267

Query: 221 FSEK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI------VDS 263
              +               I LEPG +IV        T+  I E  K          +  
Sbjct: 268 AIAEEVEEFCSLRGLKKPFIVLEPGRSIVGEAGITLYTIGSIKEIPKVRNYASVDGGMTD 327

Query: 264 SVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323
           +    +                      + GR C +GDI  +      +K G  ++    
Sbjct: 328 NPRYALYQARYDAYVVENPLGERTKVYTIAGRCCESGDILIKDIKLPELKTGQHLAILAT 387

Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
             YN +  + +N    P + +         ++  +Y D   N
Sbjct: 388 GAYNYSMSSNYNRFPRPAVVLLKNGQAKVIVKRETYEDLVRN 429


>gi|89901687|ref|YP_524158.1| diaminopimelate decarboxylase [Rhodoferax ferrireducens T118]
 gi|89346424|gb|ABD70627.1| diaminopimelate decarboxylase [Rhodoferax ferrireducens T118]
          Length = 433

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 57/384 (14%), Positives = 119/384 (30%), Gaps = 26/384 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++  K  +L  L           V++  A+K   A G+     +   G    S  +
Sbjct: 34  GTPLFVYSKSAMLAALAAYQRGFAGRNVQICYAMKANPALGVIQVFAEAGCGFDIVSGGD 93

Query: 63  VMLGHEKFG-GETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +       G  E   ++   K       A+ +        + ++L    + A    +   
Sbjct: 94  MDRVLAAGGRAEKIIFSGVGKTRAEMRRALRAGIGCFNVESEAELEVLSEVALSMGVAAP 153

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCENK 170
           + +R+NP+V              S+ G   +  + +  + V        G+  H   +  
Sbjct: 154 VSIRVNPNVDPKTHPYISTGLKDSKFGVAHERVLPTYQRAVKLAGVRVVGIDCHIGSQIT 213

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               +   +  +    +        +  I  GGG+          D     ++   +   
Sbjct: 214 QEGPYLDAVDRMLDLVEAIEAAGIPLHHIDFGGGLGIDYHGETPPDAGLLWQKLLARLDA 273

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278
                  + +EPG ++V N     + VL +     KN  I+D+++       +       
Sbjct: 274 RGFGQRHLMIEPGRSLVGNAGVCLSEVLYLKPGEQKNFCIIDAAMNDLPRPAMYQAFHQI 333

Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                    P T  V G  C +GD  G       V+ GD ++      Y ++  + +N  
Sbjct: 334 VPLNRRPGAPDTYDVVGPICESGDWIGHDRSLA-VQPGDLLAVLSAGAYCMSMASNYNSR 392

Query: 338 NMPTIAVKNVDGTIKAIREFSYND 361
                 + +        +  +  D
Sbjct: 393 GRAAEILVDGAQAYVIRQRETIAD 416


>gi|261403462|ref|YP_003247686.1| diaminopimelate decarboxylase [Methanocaldococcus vulcanius M7]
 gi|261370455|gb|ACX73204.1| diaminopimelate decarboxylase [Methanocaldococcus vulcanius M7]
          Length = 438

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 71/398 (17%), Positives = 136/398 (34%), Gaps = 35/398 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN------AGVKLLLALKCFAAWGMFDTLNQYMDGTT 56
            TP Y++ ++++  N +  +   K           +  A K  A   +   L++   G  
Sbjct: 33  GTPLYVMSEEQIKINYNKYIEAFKRWEEETGKEFVVAYAYKANANLAITRLLSKLGCGAD 92

Query: 57  SSSLYEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQK 113
             S  E+ +            +N   K  E   +           +++S+L    + A++
Sbjct: 93  VVSGGELYIAKLSNVPSRKIVFNGNCKTKEEIIMGIETKIRSFNVDSISELILINETAKE 152

Query: 114 LHKKIGL--RINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLM 162
           L +   +  RINP+V+             ++ G   +            E E  NV G+ 
Sbjct: 153 LGETANIAFRINPNVNPKTHPKISTGLKKNKFGLDVESGVALKAIKMATEMEHVNVVGVH 212

Query: 163 FHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFC 215
            H   +      F+  +  + +   E      +IE ++LGGG+    +        KD  
Sbjct: 213 CHIGSQLTDISPFIEEARKVMDFVVELKKEGIEIEDVNLGGGLGIPYEKDKQIPTQKDLA 272

Query: 216 QRLKEFSEKY-----SVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHV 269
             +     +Y        + LEPG ++V     L   V  I E      V++D+ +   +
Sbjct: 273 DAIINTLLEYKDKVEMPNLILEPGRSLVATAGYLLGRVHHIKETPITKWVMIDAGMNDMM 332

Query: 270 PDYLLYQESATIYPN--TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
              +       I            + G  C + D+FG        ++GD ++  DV  Y 
Sbjct: 333 RPAMYEAYHHIINCKVKDEKEKVSIAGGLCESSDVFGRDRELDKPEVGDILAIFDVGAYG 392

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           I+  N +N    P + + +  G        +Y D    
Sbjct: 393 ISMANNYNARGRPRMILTSKKGVFLIRERETYADLIAK 430


>gi|256045584|ref|ZP_05448464.1| diaminopimelate decarboxylase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|260562895|ref|ZP_05833381.1| diaminopimelate decarboxylase [Brucella melitensis bv. 1 str. 16M]
 gi|265992008|ref|ZP_06104565.1| diaminopimelate decarboxylase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|260152911|gb|EEW88003.1| diaminopimelate decarboxylase [Brucella melitensis bv. 1 str. 16M]
 gi|263003074|gb|EEZ15367.1| diaminopimelate decarboxylase [Brucella melitensis bv. 1 str.
           Rev.1]
          Length = 421

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 64/389 (16%), Positives = 118/389 (30%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+  +  +  +         +    +  ALK  +   +   L +   G  + S  
Sbjct: 25  VGTPFYVYSRATIERHFRVFHDAFADMDTLVTYALKANSNQAVLTALAKLGAGADTVSQG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHK 116
           E+              ++   K       A+ +        +  +L     +  A     
Sbjct: 85  EIRRALAAGIPANRIVFSGVGKTPREMDFALEAGIYCFNVESEPELEILSARAVAAGKVA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            + LRINP V           +  ++ G        +  +       NV G+  H   + 
Sbjct: 145 PVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARAAYARAASLPGLNVVGIDMHIGSQI 204

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221
                F      +    KE       I  + +GGG+            P   + Q + + 
Sbjct: 205 IDLEPFDNAFALMAELVKELQADGHNIRHVDVGGGLGIPYRTDNTPPPPPVAYAQIVAKH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278
            +   ++   EPG  IV N   L T V+ + E + KN VIVD+++   +   L       
Sbjct: 265 IKPLGLKTVFEPGRLIVGNAGLLVTEVIFVKEGDAKNFVIVDAAMNDLIRPTLYDAFHDI 324

Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                   N     A   G  C  GD  G          GD I+      Y     + +N
Sbjct: 325 RPVIMPNDNAPRIRADFVGPVCETGDYLGLDREVAKPAPGDLIAICTTGAYGAVLSSTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    + + +         +Y +   
Sbjct: 385 SRLLIPEVLGDGERYHVVRPRRTYEELLA 413


>gi|257458921|ref|ZP_05624041.1| carboxynorspermidine decarboxylase [Campylobacter gracilis RM3268]
 gi|257443625|gb|EEV18748.1| carboxynorspermidine decarboxylase [Campylobacter gracilis RM3268]
          Length = 384

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 130/379 (34%), Positives = 207/379 (54%), Gaps = 16/379 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y+ ++QKL+ NL+    + + +G K+L ALK FA       +++Y+ G T S L+
Sbjct: 6   ISTPAYVCEEQKLVKNLEILRGVGERSGAKILCALKGFAFSFAMPYVDRYLWGATCSGLH 65

Query: 62  EVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           E     E    GE H Y+ A+K+ ++D +L   + ++FN+ +Q  K++ KA       GL
Sbjct: 66  EAKFAAEFIKNGEIHTYSPAFKEDDLDEILKISNHVVFNSAAQWQKYRAKALAAGASCGL 125

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCENKSFLC 174
           R+NP  S++     +P   FSRLG   +    + ++       ++GL FH  CE +S   
Sbjct: 126 RLNPQTSFAPKDAYNPCGSFSRLGMSLEALQRAILQDGEFLRGISGLHFHALCE-ESAQS 184

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
              +L+  E +FG +   ++W++ GGG H T   Y V+     +K+F EKY V+IYLEPG
Sbjct: 185 LERVLEVFEAKFGKYFRALKWLNFGGGHHITRAGYDVELLIDLIKKFREKYEVEIYLEPG 244

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY--PNTGPYTAMV 292
           EA+      L  +VLDI EN   + I+D+S EAH+PD +L     T+     +G ++   
Sbjct: 245 EAVGWECGYLVASVLDIVENGAKIAILDASSEAHMPDTVLMPYRPTVRGESESGKFSYRF 304

Query: 293 CGRSCLAGDIFG------EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
            G +CLAGD+ G      E+ F+ P+ IGDR+ FED   Y I +   FNGI +P + + +
Sbjct: 305 GGNTCLAGDVAGLESGQPEYKFDAPLNIGDRVIFEDQIHYTIVKNTTFNGIKLPDLVLAD 364

Query: 347 VDGTIKAIREFSYNDYYNN 365
             G +  I++F Y++Y   
Sbjct: 365 ERGEVLMIKKFGYDEYARR 383


>gi|182677052|ref|YP_001831198.1| diaminopimelate decarboxylase [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182632935|gb|ACB93709.1| diaminopimelate decarboxylase [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 423

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 63/389 (16%), Positives = 114/389 (29%), Gaps = 27/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP+Y      +  + +            +  A+K  +   +  TL +   G    S  
Sbjct: 25  IGTPFYCYSTATITRHYEVFKAAFAGQDSLVCYAMKANSNQAVLQTLARLGAGMDVVSEG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD----KAQKLHK 116
           E+          +   ++   K     A+  +     FN  S+           A+    
Sbjct: 85  ELRRARAAGVPADRVTFSGVGKTEREIALALDEGIFCFNVESEPELAAISALAVARNKTA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            I LR+NP V           +  ++ G       E            + G+  H   + 
Sbjct: 145 HIALRVNPDVDAKTHAKIATGKSENKFGIPISRAREVYRMAKNLPGIAITGVDLHIGSQI 204

Query: 170 KSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKE 220
                F        +           I+ + LGGG+          + Y    +   +K+
Sbjct: 205 TDLTPFDHAFARAAEFVALLRADGHAIDHVDLGGGLGIPYHSGDDPETYHPDLYAGIIKK 264

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESA 279
                 +++ LEPG  IV N   L T VL + +   K  VIVD+++   V   L      
Sbjct: 265 RLGGLGLKLVLEPGRLIVGNAGVLVTRVLYVKQGENKTFVIVDAAMNDLVRPTLYEAHHE 324

Query: 280 -----TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                    +     A + G  C  GD           + GD ++      Y   +   +
Sbjct: 325 IAPLRPPLQDAPGVVADIVGPVCETGDYLALARRMPEPRPGDYLAILSAGAYGAVQACTY 384

Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYY 363
           N   +    +             +Y +  
Sbjct: 385 NTRLLVPEVLVKGAAYAVVRPRGTYEELI 413


>gi|127511256|ref|YP_001092453.1| diaminopimelate decarboxylase [Shewanella loihica PV-4]
 gi|126636551|gb|ABO22194.1| diaminopimelate decarboxylase [Shewanella loihica PV-4]
          Length = 414

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 56/382 (14%), Positives = 110/382 (28%), Gaps = 23/382 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  +   + + L +   G    S  E
Sbjct: 26  GTPLYVYSRATLERHWHAFDNAVADHPHMICYAVKANSNLAVLNVLARLGSGFDIVSGGE 85

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +    E         ++   K      +   +        + ++L +    A +L K   
Sbjct: 86  LARVLEAGGEASKVVFSGVGKTVAEMEMALEAGIYCFNVESAAELEQLNLVALRLGKVAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G   ++         E     V G   H   +  
Sbjct: 146 VSLRVNPDVDAGTHPYISTGLKENKFGIAMEEAEAIFLRANELPGLAVKGADCHIGSQLT 205

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
               F   +  +            +I  + +GGG+  T       +   +   L      
Sbjct: 206 ELQPFLDAMDRMLALIDRLAEQGVKIAHLDVGGGLGVTYDGEQPPEPSAYASALLGKLAG 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQE---SAT 280
             +++  EPG AI  N     T VL + EN +     VD ++   +   L          
Sbjct: 266 RDLKLIFEPGRAIAANAGIFVTQVLYLKENAEKNFALVDGAMNDLIRPSLYSAWQKIIPV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
           +          V G  C  GD  G+      ++  D ++      Y     + +N     
Sbjct: 326 VPRPGETRQYDVVGPVCETGDFLGKDRAL-NIRANDLLAVRSSGAYGFTMASNYNSRPRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDY 362
              + + +              
Sbjct: 385 AEVMVDGERHYLVREREKVAQL 406


>gi|157692836|ref|YP_001487298.1| diaminopimelate decarboxylase [Bacillus pumilus SAFR-032]
 gi|157681594|gb|ABV62738.1| diaminopimelate decarboxylase [Bacillus pumilus SAFR-032]
          Length = 443

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 68/399 (17%), Positives = 129/399 (32%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   +     +       +    ++  A K F++  MF    +        S 
Sbjct: 32  GTPLYVYDVALIRERAKSFQKAFIEEELTAQVAYASKAFSSIAMFQLAKEEGLSLDVVSG 91

Query: 61  YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E   ++     +D    A+ +    I+ +   ++   ++  Q+L K+
Sbjct: 92  GELHTAICAGFPVEKIHFHGNNKSRDELKMALENEIGCIVVDNFYEMKLLEELGQELSKQ 151

Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           +   LRI P V           +  S+ G         E  K  +ESE+  + G+  H  
Sbjct: 152 VKVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQADEAVKRVLESEVIELLGVHCHIG 211

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWI----SLGGGIHFTDKDYPVKDFC------- 215
            +      F      I  +   +     +I    +LGGG      +              
Sbjct: 212 SQIFDTAGFVLAADKIFLKLNEWRESFGFISTVLNLGGGFGIRYTEEDEPLPATEYVEKI 271

Query: 216 -QRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            Q +KE   +Y   +   ++EPG ++V +  T   T+            V     +  ++
Sbjct: 272 IQAVKENVARYEFDMPEIWIEPGRSLVGDAGTTLYTIGSSKHVPGIRDYVAVDGGMSDNI 331

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +     A     +   T  + G+ C +GD+         +  GD ++      
Sbjct: 332 RPALYQAKYEAASANKMSQSHDQTVSIAGKCCESGDMLIWDIDLPELSQGDLLAVFCTGA 391

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  N +N I  P +           +   SY D   
Sbjct: 392 YGYSMSNNYNRIPRPAVVFVEDGEAQLVVERESYADMVK 430


>gi|317176826|dbj|BAJ54615.1| carboxynorspermidine decarboxylase [Helicobacter pylori F16]
          Length = 405

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 138/400 (34%), Positives = 211/400 (52%), Gaps = 38/400 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y+++ ++L  N      +R+ +G K+LLALK +A W  F  L Q +DG  +S LY
Sbjct: 7   IPTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLDGCCASGLY 66

Query: 62  EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112
           E  L  E+FGG     E   Y+ A+K+ E+ A+L    +IIFN+  Q     ++  DK +
Sbjct: 67  EAKLAFEEFGGRESQKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNK 126

Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162
           +L        KIGLRINP  S    ++ +P    SRLG    +  +   ++    V+GL 
Sbjct: 127 QLENLGLSPIKIGLRINPLYSEVTPVIYNPCSKVSRLGITPSEFEKGVKEHGLEGVSGLH 186

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
           FH +CE          L+++E+ F  ++  + W++ GGG H T  DY V    Q +K+F 
Sbjct: 187 FHTHCEQN-ADALCRTLEHVERHFKPYLENMAWVNFGGGHHITRNDYDVNLLIQTIKDFK 245

Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
           E+Y   ++ LEPGEAI      L  +V+DI +N + + I+D+S  AH+PD L      +I
Sbjct: 246 ERYHNIEVVLEPGEAIGWQCGFLIASVIDIVQNDQEIAILDASFSAHMPDCLEMPYRPSI 305

Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
                             N G ++  + G +CLAGD  G F F+ P+K GD+I F+D+  
Sbjct: 306 LKVSVENDEELVEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFDAPLKRGDKIVFQDMLH 365

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y I + N FNG+ +P++A  +  G  K ++ FSY DY N 
Sbjct: 366 YTIVKNNSFNGVPLPSLARLDQQG-FKILKSFSYEDYKNR 404


>gi|114770083|ref|ZP_01447621.1| diaminopimelate decarboxylase [alpha proteobacterium HTCC2255]
 gi|114548920|gb|EAU51803.1| diaminopimelate decarboxylase [alpha proteobacterium HTCC2255]
          Length = 421

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 59/390 (15%), Positives = 119/390 (30%), Gaps = 26/390 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+  +  L+ +              +  A+K  +   +   L     G    S  
Sbjct: 25  VGTPFYVYSQATLMRHFRVFDEALNGMKHLICYAMKANSNIAILKILGNLGAGMDVVSGG 84

Query: 62  EVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E +        G+   ++     ++    A+ +        + ++L    + A  L    
Sbjct: 85  EYLRAKAAGISGDKIVFSGVGKTREEMALAIKNGIRQFNVESEAELKVLNEVALSLGAIA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCEN 169
            I LR+NP V           +  ++ G                E  +V G+  H   + 
Sbjct: 145 PITLRVNPDVDAKTHAKIATGKSENKFGIPISKAQEVYSIAASMEAIDVVGIDVHIGSQL 204

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221
                F    K +    K        I  + LGGG+    ++          + + + E 
Sbjct: 205 TDLEPFRLAYKKVAELTKMLRQDGHNIRRLDLGGGLGIPYENSNQIPPTPEDYAKVIHET 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESAT 280
                 +I +EPG  +  N   + ++V+   S   ++ +IVD+++   +   +       
Sbjct: 265 VGDLDCEIEIEPGRLLAGNAGLMVSSVIYNKSGEGRDFMIVDAAMNDLIRPAMYEAYHEI 324

Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           I               + G  C  GD F       PV  G+ ++F     Y     + +N
Sbjct: 325 IPVIETTGSPEIRDYDIVGPVCETGDTFANKRALTPVADGEMVAFRSAGAYGAVMASEYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              +    +   D         S       
Sbjct: 385 TRPLIPEVLVYGDQFSIIRNRPSIEAIIKR 414


>gi|304394204|ref|ZP_07376127.1| diaminopimelate decarboxylase [Ahrensia sp. R2A130]
 gi|303293644|gb|EFL88021.1| diaminopimelate decarboxylase [Ahrensia sp. R2A130]
          Length = 423

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 60/389 (15%), Positives = 117/389 (30%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+     L  +              +  A+K  +   + +TL +   G    S  
Sbjct: 25  VGTPFYVYSSATLTRHYTVFADAFSELDALVCYAMKANSNQAVLETLARLGSGADVVSGG 84

Query: 62  EVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDK--AQKLHK 116
           E+              ++   K      +    +       +  +L     +  A     
Sbjct: 85  ELTRARRAGIPASKIMFSGVGKTVAEMDLALGEEILCFNIESEPELEMLSARAAAMGKTA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCEN 169
            +  RINP V           +   + G   ++         E     V G+  H   + 
Sbjct: 145 HVSFRINPDVDAKTIEKISTGKKTDKFGIPHEEASRIYARAAELPGIKVTGIDMHIGSQI 204

Query: 170 K---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK-----DYPVKDFCQRLKEF 221
                F      L ++          I+ + +GGG+               D+   +K+ 
Sbjct: 205 TDLAPFDTAFGKLADLVGHLRGEGHDIQHVDVGGGLGIPYHDDNNPPPNPDDYAAVVKKH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                 ++  EPG  I  N     T V+ + E + ++ VIVD ++   +   L       
Sbjct: 265 VTGLDAKVIFEPGRLIAGNAGLFVTKVIYVKEGDARSFVIVDGAMNDLIRPTLYEAYHEV 324

Query: 281 I-----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                   N   +TA V G  C +GD   +    +  + GD I+      Y   +   +N
Sbjct: 325 RSVDVNRGNGPRFTADVVGPVCESGDYLAKEREMQKPRPGDLIALGSAGAYGAVQAGTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    +   D         S ++  +
Sbjct: 385 TRALVPEVMVKGDQYHVIRPRLSLDELID 413


>gi|307731218|ref|YP_003908442.1| diaminopimelate decarboxylase [Burkholderia sp. CCGE1003]
 gi|307585753|gb|ADN59151.1| diaminopimelate decarboxylase [Burkholderia sp. CCGE1003]
          Length = 420

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 56/387 (14%), Positives = 120/387 (31%), Gaps = 26/387 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L    +            + +A+K  +   + +   +   G    S  E
Sbjct: 28  GTPLYVYSRAALTEAWNAYASACAGRRASVHVAVKANSNLAVLNVFARLGAGFDIVSGGE 87

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +          E   ++    + +   +A+ +        ++ +L++    A ++     
Sbjct: 88  LARVLAAGGKAENTVFSGVGKHANEMREALAAGVKCFNVESIPELDRLNAVAAQMGKKAP 147

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LR+NP V              ++ G    +   +           V G+  H   +  
Sbjct: 148 VSLRVNPDVDAKTHPYISTGLKSNKFGVAFDEARATYQAAAAMANLEVVGIDCHIGSQIT 207

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               +   +     + ++       I  I +GGG+  T  D    D    ++   ++   
Sbjct: 208 EVAPYLDAVDKLLELVEQIEQDGMTIRHIDVGGGLGITYDDETPPDISDFVRTVLDRIEA 267

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                 ++Y EPG ++V N   L T V  +     KN  IVD+++       +     A 
Sbjct: 268 RGHGHREVYFEPGRSLVGNAGVLLTRVEFLKPGAEKNFAIVDAAMNDLARPAMYEAYHAI 327

Query: 281 ---IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
              +      +   V G  C +GD  G       V+ GD ++      Y     + +N  
Sbjct: 328 DAVVQRELPAHVYDVVGPVCESGDWLGRERLLA-VEPGDLLAIRSAGAYGFVMSSNYNTR 386

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
                 + +                + 
Sbjct: 387 PRAAEVMVDGTQAHVVRAREEVQQLFA 413


>gi|149370483|ref|ZP_01890172.1| diaminopimelate decarboxylase [unidentified eubacterium SCB49]
 gi|149356034|gb|EDM44591.1| diaminopimelate decarboxylase [unidentified eubacterium SCB49]
          Length = 414

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 69/386 (17%), Positives = 121/386 (31%), Gaps = 27/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            +P Y+ D   + N         K    VK+  A+K  +   +   +  +  G  + S+ 
Sbjct: 14  GSPVYVYDATTIENQYKRLTSAFKKVKQVKVHYAVKALSNISILKLIKSFGAGLDTVSIQ 73

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           EV LG    F  +   +       +    +      I  +++S L +F  +    +  + 
Sbjct: 74  EVQLGLTAGFEPQDIIFTPNGVSLDEIEKVAKLGVQINIDSLSVLEEFGTR--NKNVPVC 131

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFL 173
           +RINP V              S+ G                  NVNG+  H   +     
Sbjct: 132 IRINPHVMAGGNTNISVGHIDSKFGISIHQIPHILRIVENTKMNVNGIHMHTGSDILDID 191

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY--- 230
            F    + I  E       +E+I  G G     K   ++   +   E   +         
Sbjct: 192 VFLYASE-ILFETAKNFKNLEFIDFGSGFKVPYKKDDIETNIEEFGEKLSQRFNDFCKNY 250

Query: 231 -------LEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLY--QESAT 280
                   EPG+ +V+        V +I +        VDS     +   L     E   
Sbjct: 251 GKELTLAFEPGKFLVSEAGQFLVQVNNIKQTTSTVFAQVDSGFNHLIRPMLYGSQHEIVN 310

Query: 281 IYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
           I    G      V G  C   D F        +  GD +SF++   Y  +  + FN    
Sbjct: 311 ISNPEGRERFYSVVGYICET-DTFANNRRISEINQGDILSFKNAGAYCYSMSSNFNSRYR 369

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365
           P   +   +      +  +++D  +N
Sbjct: 370 PAEVLWYNEKAHLIRKRETFDDIIHN 395


>gi|323339443|ref|ZP_08079725.1| diaminopimelate decarboxylase [Lactobacillus ruminis ATCC 25644]
 gi|323093154|gb|EFZ35744.1| diaminopimelate decarboxylase [Lactobacillus ruminis ATCC 25644]
          Length = 435

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 66/397 (16%), Positives = 131/397 (32%), Gaps = 37/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP    D +K+   +       ++AGVK  +  A K F+A  M+  +N+Y  G    S 
Sbjct: 30  GTPLIAYDVKKIKKQIRGFKQAFEDAGVKYMVSYASKAFSALAMYQLINKYGLGCDIVSG 89

Query: 61  YEVMLGHEK-FGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    +     E   ++     +D    AV     T++ +   ++       ++ H  
Sbjct: 90  GELYAALKGGMPPERIEFHGNNKLQDELEMAVDEKIGTVVVDNFREIKLLDHVLRRKHAS 149

Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           IG  LR+ P +           +  S+ G         E  +  +++   N+ G+  H  
Sbjct: 150 IGVVLRVTPGIEAETHQYIMTGQSNSKFGFDIRSGQAEEALQQLMKNPRMNLMGIHCHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            +  +   F    + + +    +      + + ++LGGG      D+      +      
Sbjct: 210 SQIFAVNGFLMAAEKLVEVLADWKKRFGYEADVLNLGGGFGIRYNDFDQPLPAEEFVSAI 269

Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269
            +              +I +EPG A+V    T   T+    +         VD  +  ++
Sbjct: 270 VERVKELVAKYELKMPEIIIEPGRAMVGEAATTLYTIGSRKDVDGVCHFLAVDGGMGDNI 329

Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L          +           V G+ C +GD+          K GD ++      
Sbjct: 330 RPALYDAHYEAYLADRPNALREQMVTVVGKYCESGDVLVHDCALPNTKPGDILAMPSTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
           Y     + +N    P +       +   +R  +Y D 
Sbjct: 390 YGYTMASNYNRNPRPAVVFCEDGKSRLVVRRETYADM 426


>gi|120609686|ref|YP_969364.1| diaminopimelate decarboxylase [Acidovorax citrulli AAC00-1]
 gi|120588150|gb|ABM31590.1| diaminopimelate decarboxylase [Acidovorax citrulli AAC00-1]
          Length = 427

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 61/389 (15%), Positives = 114/389 (29%), Gaps = 28/389 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  K  +L+ L+          V++  A+K  ++ G+     +   G    S  E
Sbjct: 34  GTPLYVYSKASMLSALEAYQRGFAGRKVQICYAMKANSSLGVLQLFARAGCGFDIVSAGE 93

Query: 63  VMLGHEKFG--GETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G   +     V     E+     +        +  +L    + A        
Sbjct: 94  LRRVLAAGGEAAKVIFSGVGKTRQEMREALEAGIGCFNVESEPELEVLNEVAMACGRRAP 153

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENK 170
           + +R+NP+V              ++ G   +                V G+  H   +  
Sbjct: 154 VSIRVNPNVDPKTHPYISTGLKGNKFGVAHERTVATYQRAAALPGLQVVGIDCHIGSQIT 213

Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               +   +  +     +       I  I  GGG+                K+   +   
Sbjct: 214 EATPYLDAVDRMLDLVAQIESAGIPIHHIDFGGGLGIDYNGDTPPAADALWKQLLARLDA 273

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
                 Q  +EPG ++V N     T VL +    +    +  +    +P   +YQ    I
Sbjct: 274 RGYGDRQFMIEPGRSLVGNAGVCLTEVLYVKPGEQKNFCIVDAAMNDLPRPAMYQAFHGI 333

Query: 282 YPNTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
            P   P          V G  C +GD  G       V+ GDR++      Y  +  + +N
Sbjct: 334 VPVAAPARDAATAVYDVVGPVCESGDWIGRDRTLA-VRAGDRLAVLSAGAYCSSMGSTYN 392

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
               P   + +              D + 
Sbjct: 393 TRARPAEVLVDGTHAHLIRTREPLEDTFR 421


>gi|119945950|ref|YP_943630.1| carboxynorspermidine decarboxylase [Psychromonas ingrahamii 37]
 gi|119864554|gb|ABM04031.1| carboxynorspermidine decarboxylase [Psychromonas ingrahamii 37]
          Length = 376

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 172/365 (47%), Positives = 235/365 (64%), Gaps = 3/365 (0%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TPY+++D++KL+ NL+ A  ++K +G KL+LALKCF+ WG FDT+  Y+DGTTSS  +EV
Sbjct: 10  TPYFMVDEKKLIENLEKAKQLKKISGAKLVLALKCFSTWGTFDTIKPYLDGTTSSGPFEV 69

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
            LGHE FGGETHAY+V Y   +I+ V    D IIFN+++QL     +A      +GLRIN
Sbjct: 70  QLGHETFGGETHAYSVGYSSHDINTVAPLSDKIIFNSLTQLAT-HFEAANPFASLGLRIN 128

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
           P  S +   LA+P RP+SRLG K      S +  V+G MFH NCENK    F  +L  I 
Sbjct: 129 PERSVAGQDLANPTRPYSRLGVKQDLLDLSIVDKVDGFMFHMNCENKDADAFIEILDYIS 188

Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243
             F  ++T ++W+SLGGGI FT  DYP++     LK FSEK+ +Q+YLEPGEAI+T T  
Sbjct: 189 NTFAEYLTHLKWLSLGGGIFFTAPDYPIEKLALALKAFSEKHQLQLYLEPGEAIITRTAD 248

Query: 244 LNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAMVCGRSCLAGD 301
           L  +V+DI +N K   IVDS+ EAH  D L+Y E A+I      G +  ++   SCLAGD
Sbjct: 249 LVVSVIDIVDNNKKTAIVDSATEAHRLDTLIYNEPASIGEASADGAFPYIIGSCSCLAGD 308

Query: 302 IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361
            F E  F++ ++IG ++   D AGY + + NWFNG+ MP+I  K VDG I+ +  F Y D
Sbjct: 309 QFCETQFDEALQIGQKLHILDSAGYTMVKLNWFNGLKMPSIYYKRVDGEIELLNSFDYQD 368

Query: 362 YYNNL 366
           Y ++L
Sbjct: 369 YKDSL 373


>gi|78187207|ref|YP_375250.1| diaminopimelate decarboxylase [Chlorobium luteolum DSM 273]
 gi|78167109|gb|ABB24207.1| diaminopimelate decarboxylase [Chlorobium luteolum DSM 273]
          Length = 416

 Score =  226 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 61/386 (15%), Positives = 115/386 (29%), Gaps = 23/386 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  K  + +                  ++K      +  TL     G   +S  E
Sbjct: 29  GTPLYVTSKHSIEDRYREFEAAFSGLEHFTCYSVKANFNLSVIKTLGDLGCGCDVNSAGE 88

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIF--NTVSQLNKFKDKA--QKLHKK 117
           +         G    +    K  +  +       ++    ++S+L      A  + L   
Sbjct: 89  LFRALKAGVPGSRIIFAGVGKRPDEISYALLSGVLMLKAESLSELRAIDAIAAERGLTAP 148

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           + LRINP+V+              + G    +  E        +   + GL  H   +  
Sbjct: 149 VALRINPNVTAETHPYITTGDSKEKFGIDEAELPEVFSLLGELQHVRLVGLDMHIGSQIF 208

Query: 171 SFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               + A +  +   F         +E++ +GGG   T      + P+  F  ++    +
Sbjct: 209 DPEFYVAAITKLLDIFNYSRSKGFGVEFLDIGGGFPATYDPMKPETPLDRFADKIIPMLK 268

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLYQESATI 281
              V++  EPG  ++ N + L T +L    N            +   +   L       +
Sbjct: 269 PTGVKVIFEPGRFLLANASVLLTRILYRKRNHTGKEFFVVDGGMTELIRPALYQSHHEVL 328

Query: 282 YPNTGPYTA--MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                  T    V G  C + D F           G+ ++   V  Y     + +NG   
Sbjct: 329 SVTRHDETVVADVVGPICESSDFFARQRAIGDAPEGELLAVMTVGAYGAVMSSNYNGRLR 388

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365
           P   +          R  S+     N
Sbjct: 389 PAEVMVEGSDVQVIRRRESFEQLIQN 414


>gi|187925578|ref|YP_001897220.1| diaminopimelate decarboxylase [Burkholderia phytofirmans PsJN]
 gi|187716772|gb|ACD17996.1| diaminopimelate decarboxylase [Burkholderia phytofirmans PsJN]
          Length = 420

 Score =  226 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 58/387 (14%), Positives = 122/387 (31%), Gaps = 26/387 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L    +            + +A+K  +   + +   +   G    S  E
Sbjct: 28  GTPLYVYSRAALTEAWNAYAGACAGRRASVHVAVKANSNLAVLNVFARLGAGFDIVSGGE 87

Query: 63  VMLGHEKFG-GETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKK 117
           +       G  E   ++    + D   DA+ +        ++ +L++      A      
Sbjct: 88  LARVLAAGGRAENTVFSGVGKHADEMRDALAAGVKCFNVESIPELDRLNAVAAAMGKKAP 147

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LR+NP V              ++ G   +D   +           V G+  H   +  
Sbjct: 148 VSLRVNPDVDAKTHPYISTGLKSNKFGVAFEDARATYQAAAAMANLEVVGIDCHIGSQIT 207

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               +   +  +    ++      +I  I +GGG+  T  D    +  + ++   ++   
Sbjct: 208 EVAPYLDAVDKVLELVEQIEQDGVKIRHIDVGGGLGITYDDETPPEIGEFVRTVLDRIEA 267

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278
                 ++Y EPG ++V N   L T V  +     KN  IVD+++       +       
Sbjct: 268 RGHGHREVYFEPGRSLVGNAGMLLTRVEFLKPGAEKNFAIVDAAMTDLARPAMYEAYHAI 327

Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
              +  +   +   V G  C +GD  G       V+ GD ++      Y     + +N  
Sbjct: 328 DPVVKRDVPAHVYDVVGPVCESGDWLGRERLLS-VEPGDLLAIRSAGAYGFVMSSNYNTR 386

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
                 + +                + 
Sbjct: 387 PRAAEVMVDGTQVHVVRAREEVKQLFA 413


>gi|88705498|ref|ZP_01103208.1| Diaminopimelate decarboxylase [Congregibacter litoralis KT71]
 gi|88700011|gb|EAQ97120.1| Diaminopimelate decarboxylase [Congregibacter litoralis KT71]
          Length = 414

 Score =  226 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 59/384 (15%), Positives = 111/384 (28%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP YL  +  +   L             +  A+K  +   + DTL +   G    S+ E
Sbjct: 25  GTPCYLYSRAAMEAALAEYHDALSGCEHLVCYAVKANSNLAVLDTLARQGAGFDIVSVGE 84

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++     ++    A+          + ++L   ++ A  L     
Sbjct: 85  LERVLAAGGDPGKVVFSGVVKRREEMHRALELGIRCFNVESEAELEVLQEVAAALGKRAP 144

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           + +R+NP V              ++ G      ++            V GL  H   +  
Sbjct: 145 VSVRVNPDVDAGTHPYISTGLRENKFGVATDVAMKLLRHGKTLPNIDVIGLDCHIGSQLT 204

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---KEFSEK 224
                   L+    +         +I  + LGGGI    KD         +   ++    
Sbjct: 205 DMAPLLESLRQLLVMVDTLEAEGIRIHHLDLGGGIGVRYKDEEPPAIADYIAAVRKALGD 264

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATIYP 283
             + +  EPG +IV N   L T V    E   +    VD+++   +   L          
Sbjct: 265 RKLCLVFEPGRSIVANAGVLLTRVHYTKETDAHSFALVDAAMNDFIRPALYQAWVDIQTT 324

Query: 284 NTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                   T  + G  C  GD  G+      +  G  ++      Y     + +N     
Sbjct: 325 APSEEPIRTWNIVGPVCETGDFLGKDRDLA-LAPGTLLAIHGAGAYGFVMSSNYNTRPRA 383

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + +   +       S  D   
Sbjct: 384 AEVMIDGSSSQLVRERESIGDLLR 407


>gi|170718155|ref|YP_001785183.1| diaminopimelate decarboxylase [Haemophilus somnus 2336]
 gi|168826284|gb|ACA31655.1| diaminopimelate decarboxylase [Haemophilus somnus 2336]
          Length = 417

 Score =  226 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 63/384 (16%), Positives = 120/384 (31%), Gaps = 25/384 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K      + + + +   G    S  E
Sbjct: 26  GTPAYIYSRATLERHWHAFDNALGDHPHLICFAVKSNPNIAILNIMARLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +          +   ++   K  +  A             + ++L K    A+K+ K   
Sbjct: 86  LERVLFAGGDPKKVVFSGVAKSEQEIARALEVGIRCFNVESAAELTKINQVARKMGKIAS 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           I LR+NP V              ++ G   +   E   +        + G+  H   +  
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVEQAREVYRQASQLENIKIVGIDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFSE 223
               F         + ++       +E + LGGG+  T       +P +     L++   
Sbjct: 206 ELQPFLDATDRLIVLMEQLKKDGITLEHVDLGGGLGVTYSDEKAPHPSEYATALLEKLKN 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
             +++I LEPG AI  N   L T V  I     ++  IVD+ +   +   L       I 
Sbjct: 266 YQNLEIILEPGRAITANAGILLTRVEYIKSNESRHFAIVDTGMNDMIRPALYQAYMNIIE 325

Query: 283 PNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +           V G  C   D  G+      +  GD I       Y  +  + +N   
Sbjct: 326 VDRTLSRETKVYDVVGPICETSDFLGKQRSLA-IAQGDFIVQRSAGAYGASMASTYNSRP 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362
                + + +      R   + + 
Sbjct: 385 RAIEIMVDGEQVHLIKRREEFAEL 408


>gi|146295969|ref|YP_001179740.1| diaminopimelate decarboxylase [Caldicellulosiruptor saccharolyticus
           DSM 8903]
 gi|145409545|gb|ABP66549.1| diaminopimelate decarboxylase [Caldicellulosiruptor saccharolyticus
           DSM 8903]
          Length = 433

 Score =  226 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 63/402 (15%), Positives = 123/402 (30%), Gaps = 37/402 (9%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTS 57
           M  TP Y+++++ +  N++      +        ++ A K F    M     Q   G   
Sbjct: 28  MYGTPLYVMNERMIRENINRFKNALEKYFGQNGLVIYASKAFCTKAMCQIAKQEEIGLDV 87

Query: 58  SSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDKAQKLH 115
            S  E+       F  +   ++   K  +   + + N   I+ +   +L       +   
Sbjct: 88  VSGGELFTALSVDFPTDKIFFHGNNKTYDELEMAVENGVKIVIDNFDELEMLSVICKTKS 147

Query: 116 K--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFH 164
           K   + +R+ P +           +  S+ G   ++          +E +   + GL  H
Sbjct: 148 KKANVLIRVKPGIEAHTHEFIRTGQIDSKFGVALENGEAFSMVKKILEMDELKLIGLHCH 207

Query: 165 NNCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ---- 216
              +      F      ML+ I K       +I+ + LGGG       +      +    
Sbjct: 208 IGSQIFETAPFKLAARVMLEFILKIKRELNYEIDILDLGGGFGIKYTAFDQPPQIEKFIE 267

Query: 217 -------RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI------VDS 263
                     +  E     I LEPG +IV        T+  I E             +  
Sbjct: 268 AISEEIEEFCQQKELKKPFIVLEPGRSIVGEAGITLYTIGSIKEIPNVRNYASVDGGMTD 327

Query: 264 SVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323
           +    +                      + GR C +GDI  +      +K G  ++    
Sbjct: 328 NPRYALYQAKYDAYVVENPIGEKVKVYTIAGRCCESGDILIKDIKLPELKTGQHLAILAT 387

Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
             YN +  + +N    P + +         ++  +Y D   N
Sbjct: 388 GAYNYSMSSNYNRFPRPAVVLLKDSQVRVIVKRETYEDIVRN 429


>gi|312130133|ref|YP_003997473.1| carboxynorspermidine decarboxylase [Leadbetterella byssophila DSM
           17132]
 gi|311906679|gb|ADQ17120.1| carboxynorspermidine decarboxylase [Leadbetterella byssophila DSM
           17132]
          Length = 379

 Score =  226 bits (575), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 118/373 (31%), Positives = 197/373 (52%), Gaps = 9/373 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I +P ++++++ L NNL+    ++  +G ++++ALK F+ +  F  + QY+ G T+SSL 
Sbjct: 8   IPSPAFVLEEKLLKNNLELLKSVQDRSGAEIIVALKGFSFYSKFPLVKQYLSGATASSLN 67

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIG 119
           E  L  E+ G   H Y  AYK+ E D ++     I FN+++Q  K+KDK  A      +G
Sbjct: 68  EARLIVEEMGVLAHTYCPAYKEEEFDQMMEYSSHITFNSLNQYEKYKDKVKAFPRKISMG 127

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           LRINP  +  +  + +P    SRLG       ++  + + GL  H  CEN S+      L
Sbjct: 128 LRINPEYAEVEVDMYNPAIKGSRLGITRNLLGDTLPEGIEGLHSHTLCENDSY-VLERTL 186

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
            +IE +FGH + Q +W++LGGG   T K Y  +     ++    KY++++ LEPG AI  
Sbjct: 187 VHIEGKFGHLLHQAKWLNLGGGHLMTRKGYDHEHLIGLIQNLKAKYNIEVILEPGSAIGW 246

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEA-HVPDYLLYQESATIYP-----NTGPYTAMVC 293
            T  L + VLDI +++   + +     A H+PD L       ++        G +   + 
Sbjct: 247 ETGFLRSKVLDIVDSLGVKIAILDVSFAAHMPDTLEMPYKPKVWGAESEAVEGKFVYRLG 306

Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353
           G +CLAGD   E+ F++ +K GD I F D+  Y + +   FNG+ +P+I V   DG+ + 
Sbjct: 307 GMTCLAGDYMSEYSFDQELKEGDTIVFNDMIHYTMVKTTTFNGVGLPSIGVLREDGSFEL 366

Query: 354 IREFSYNDYYNNL 366
           ++ F Y  + + L
Sbjct: 367 LKSFGYETFKDRL 379


>gi|299821617|ref|ZP_07053505.1| diaminopimelate decarboxylase [Listeria grayi DSM 20601]
 gi|299817282|gb|EFI84518.1| diaminopimelate decarboxylase [Listeria grayi DSM 20601]
          Length = 488

 Score =  226 bits (575), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 57/404 (14%), Positives = 129/404 (31%), Gaps = 39/404 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   + +         +  G   ++  A K F+A  ++  + +        S 
Sbjct: 83  GTPLYVYDVALIRDRARGFKRTFEEMGITAQVAYASKAFSAIAIYQLMAEEGLSVDVVSG 142

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F  E   ++   K  E   +        I+ +   +++  K     ++  
Sbjct: 143 GELYTAIKAGFPAELIHFHGNNKTREEIEMALDYEIGCIVVDNFYEIDLLKTILSERQQK 202

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHN 165
             + +R+ P +           +  S+ G    +            +S   +V GL  H 
Sbjct: 203 VSVLVRVTPGIEAHTHDYILTGQEDSKFGFGLDNGQAEKALQLLLQDSAYFDVKGLHCHI 262

Query: 166 NCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-DFCQRLKE 220
             +      F      ++  + +    F  +   ++LGGG            +  + +++
Sbjct: 263 GSQIFETTGFKVAAHRVMDKLVEWRDAFGFKASVLNLGGGFGVRYTADDEPLEPAEYVRQ 322

Query: 221 FSEKYS----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268
              +             +I++EPG A+V    T   ++    E       +     +  +
Sbjct: 323 IILEVKEVAQQNELAVPEIWIEPGRALVGEAGTTLYSIGSRKEVPGIRDYIAVDGGMNDN 382

Query: 269 VPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
           +   L   +   +  N        T  + G+ C +GD+         ++ G+ ++     
Sbjct: 383 IRPALYDAKYEAVIANHPEKAAEETVSIAGKCCESGDMLIWDIPLPNMQSGEILAVFCTG 442

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367
            Y     + +N I  P +           +   +Y+D   N LS
Sbjct: 443 AYGYAMASNYNRICRPAVVFVENGIDKLVVARETYDDLIQNDLS 486


>gi|168185565|ref|ZP_02620200.1| diaminopimelate decarboxylase [Clostridium botulinum C str. Eklund]
 gi|169296355|gb|EDS78488.1| diaminopimelate decarboxylase [Clostridium botulinum C str. Eklund]
          Length = 432

 Score =  225 bits (574), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 67/399 (16%), Positives = 120/399 (30%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           KTP Y++D++ +  N        K      K+  A K F    M   +N+        S 
Sbjct: 29  KTPLYVMDEELIRENCRRYRKNFKGNNEANKVAYAGKAFLTIAMCQLINEEGMCLDVVSG 88

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F  E   ++   K  E   +         + +   ++      A      
Sbjct: 89  GELYTAYKSNFPMEKIYFHGNNKTFEEIDMAIKLGVGRFVADNFYEIQNINKIAKKYNKV 148

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
           +KI LRI P +           +  S+ G                +       G   H  
Sbjct: 149 QKILLRITPGIEAHTHDYIKTGQIDSKFGFTLLQDQTLKAVEMANDFSNIEFVGFHCHIG 208

Query: 167 CENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            +      +      ML  I++        I+ + LGGG              +      
Sbjct: 209 SQIFEIEPYRDEVRIMLSLIKEVNEKLGCTIKELDLGGGFGIYYGKGDSPKKIEDFCSAI 268

Query: 223 EKYSVQI-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            + ++++            +EPG +IV N  T   TV  I E  +    V     +  ++
Sbjct: 269 LEEAIKVSKELNIQLPSLVIEPGRSIVGNAGTTLYTVGSIKEIPEIRKYVSVDGGMTDNI 328

Query: 270 PDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +  N           + G+ C +GDI  E       + GD ++      
Sbjct: 329 RPALYRASYECLVANKVKAASKEKVTISGKCCESGDILLEDVKVSHAESGDILAVLTTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  + +N I    +   N   +    +  SY D  +
Sbjct: 389 YGYSMASNYNKIPRSAVVFVNKGRSKLICKRQSYEDLIS 427


>gi|297616725|ref|YP_003701884.1| diaminopimelate decarboxylase [Syntrophothermus lipocalidus DSM
           12680]
 gi|297144562|gb|ADI01319.1| diaminopimelate decarboxylase [Syntrophothermus lipocalidus DSM
           12680]
          Length = 443

 Score =  225 bits (574), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 61/399 (15%), Positives = 124/399 (31%), Gaps = 36/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV-KLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP Y++D++    N           G   ++ A K  +       + +   G    S  
Sbjct: 24  GTPLYVLDEEGFRANCRAFRDAFAKYGHSLVIYASKTLSCLAACIIVEEEGLGLDVVSGG 83

Query: 62  EVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E+       F  E   ++   K  D  + AV S    ++ +   ++   ++  ++L   +
Sbjct: 84  ELYTALRASFPPERIFFHGNNKTLDELVMAVESRVGRVVVDNFYEIELLENVCERLGRTQ 143

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCK--DKIES-------EIKNVNGLMFHNNC 167
            I LRI P V           +  S+ G      D +++       +   + GL  H   
Sbjct: 144 NILLRITPGVEAHTHEYIKTGQIDSKFGFTLANGDALKAVDTVCRTKNLRLMGLHCHIGS 203

Query: 168 ENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223
           +      ++   + +          F  ++E +++GGG              +   +   
Sbjct: 204 QIFEMDAYAHATEIMVDLLAEIKNRFGLELEELNMGGGFGIYYHSGDEPRQPEEWAKAVM 263

Query: 224 K-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVP 270
                          ++ +EPG AI         T+    E       V     +  +  
Sbjct: 264 STLRSKTEANALRMPKVIVEPGRAIAGPAGITLYTLGSYKEIPGVRKYVAVDGGMTDNPR 323

Query: 271 DYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
             L   +   +              V GR C +GD+          + GD ++      Y
Sbjct: 324 PALYGSKYEAVIANRADREPDELVSVAGRCCESGDMLIWDIKLSHPQPGDILAVFATGAY 383

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           N +  + +N +  P + +         ++  SY D   N
Sbjct: 384 NYSMSSNYNRVGRPAMVLVRDGQADLIVKRESYEDLIRN 422


>gi|212638853|ref|YP_002315373.1| diaminopimelate decarboxylase [Anoxybacillus flavithermus WK1]
 gi|212560333|gb|ACJ33388.1| Diaminopimelate decarboxylase [Anoxybacillus flavithermus WK1]
          Length = 460

 Score =  225 bits (574), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 55/401 (13%), Positives = 119/401 (29%), Gaps = 37/401 (9%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSS 58
           +  TP Y+ D   +         +     V+  +  A K F+   +   + Q        
Sbjct: 49  LYGTPLYIYDVALIRERARAFKRMFDKHRVRAQVAYASKAFSTIAIVQLMEQEGLSLDVV 108

Query: 59  SLYEVMLGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           S  E+       F  E   ++   K  +    A+ +    ++ +   +L   +       
Sbjct: 109 SGGELYTALAAGFPVERIHFHGNNKSKEELQMAIEAKIGCVVVDNFYELELLQQLCLMHE 168

Query: 116 KKI--GLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFH 164
             +   LR+ P +           +  S+ G         E  +  + S   +V G+  H
Sbjct: 169 YTMPILLRVTPGIEAHTHDYILTGQEDSKFGFDLHNGQADEALQRALASSHIHVLGIHCH 228

Query: 165 NNCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-------- 212
              +      F      + + +           + ++LGGG                   
Sbjct: 229 IGSQIFDATGFVLATKKLFEKLAIWRDTHHFTAQVVNLGGGFGIRYTKEDDPLAPEQYVE 288

Query: 213 DFCQRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEA 267
              + +K     +     +I++EPG ++V +  T   T+    E       V     +  
Sbjct: 289 QIIEEVKRNVASFHLPFPEIWIEPGRSLVGDAGTTIYTIGSRKEVPNVRQYVAVDGGMSD 348

Query: 268 HVPDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323
           ++   L   +   +      +       + G+ C +GD+          + GD ++    
Sbjct: 349 NIRPALYEAKYEAVLANRMHDHCEEVVAIAGKCCESGDMLIWDLPLPKAQPGDYLAVFCT 408

Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             Y     N +N I  P +           ++  +Y D   
Sbjct: 409 GAYGYAMANNYNRIPRPAVVFVEDGEAQLVVKRETYEDLIR 449


>gi|296536745|ref|ZP_06898801.1| diaminopimelate decarboxylase [Roseomonas cervicalis ATCC 49957]
 gi|296262912|gb|EFH09481.1| diaminopimelate decarboxylase [Roseomonas cervicalis ATCC 49957]
          Length = 447

 Score =  225 bits (574), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 54/394 (13%), Positives = 117/394 (29%), Gaps = 29/394 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           + TP ++     L           + AG    +  A K      +   L     G    S
Sbjct: 48  VGTPTWVYSANTLRRRYRALRDALRGAGLDASIHYATKANDNQAVLRVLGAEGAGADIVS 107

Query: 60  LYEVMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL-- 114
           + E+              ++      +    A+      +   +V +++     A +L  
Sbjct: 108 MGELRATMAAGIPAGATVFSGVGKKPEEIRFALAQGIFQLNAESVEEIDMIAAIAAELGV 167

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-----ESEIKNVNGLMFHNNCEN 169
              + LR+NP V           +  ++ G   +D +      + +  +  +    +  +
Sbjct: 168 RAPVALRVNPDVDAKTHAKITTGKAENKFGIAYEDALPLYARMAALPAIRPIGIATHIGS 227

Query: 170 KSFLCFSAMLKNIEK------EFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKE 220
           +     +       +              IE +  GGG+    +D    P +     ++ 
Sbjct: 228 QITEGVAPFRAAYARLAEMVRAIRAQGLPIERVDCGGGLGIPYRDEVAPPPEALAGAIQA 287

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTT-VLDISENIKNLVIVDSSVEAHVPDYLLYQESA 279
                 + + LEPG  I      L  + VL      +  ++ D+++   V   +      
Sbjct: 288 TLGGLGLPVMLEPGRWIAGPAGVLLASIVLQKQGRGRRFLVADAAMNDLVRPAMYEAWHG 347

Query: 280 TIYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
            +  +   +      A + G  C +GD F        +  GD I+F D   Y     + +
Sbjct: 348 ILPLDPKRHAAPLAPADIVGPVCESGDTFARGRAMPDMAPGDFIAFLDAGAYGAVMSSTY 407

Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYY--NNL 366
           N   +    + +           +  D      L
Sbjct: 408 NARPLAAEVLVDGHRHAVVRPRQTPEDLLAHQRL 441


>gi|295704431|ref|YP_003597506.1| diaminopimelate decarboxylase [Bacillus megaterium DSM 319]
 gi|294802090|gb|ADF39156.1| diaminopimelate decarboxylase [Bacillus megaterium DSM 319]
          Length = 442

 Score =  225 bits (574), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 60/400 (15%), Positives = 128/400 (32%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           + +G   ++  A K F    M   L +        S 
Sbjct: 30  GTPLYIYDQELIETKCKAFHSAFRRSGFSYQIAYAGKAFLCMEMASLLTKLDMSLDVVSG 89

Query: 61  YEVMLGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+    E  +  E   ++   K  +    A+ +N    + +  ++L      A  +K  
Sbjct: 90  GELFTALEAGYPAERIHFHGNNKTIEEMEMALDANIGCFVVDNFTELEVLHALAAERKQK 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
             I LR+ P +           +  S+ G    +          +E    ++ G+  H  
Sbjct: 150 ASILLRVTPGIEAHTHEYIMTGQEDSKFGFGLSNDQAMKAVSSALEKPYYDLLGIHCHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            +      FS  +  +             +++ +++GGG      +       +   +  
Sbjct: 210 SQIFEVDGFSRAIDILTDFLFSIRDKMEFEVKVLNVGGGFGIRYTESDSPLPVEYYVDAL 269

Query: 223 EKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269
            +              ++++EPG +IV    T   T+    E         +D  +  ++
Sbjct: 270 TEKLSRTLTEQNYTLPEVWIEPGRSIVGEAGTTLYTIGSTKEIPGVRKYVGIDGGMTDNI 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   +      +    T  + G+ C +GD+         V  GD ++      
Sbjct: 330 RPALYDAKHEAVLANRVTDKKDETVSIAGKCCESGDMLIWDIDLPRVNQGDLLAVSSTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           YN +  + +N I  P +          A+   +Y D    
Sbjct: 390 YNYSMASNYNRIPRPAVVFVKNGEARLAVERETYEDLVRK 429


>gi|113461849|ref|YP_719918.1| diaminopimelate decarboxylase [Haemophilus somnus 129PT]
 gi|112823892|gb|ABI25981.1| diaminopimelate decarboxylase [Haemophilus somnus 129PT]
          Length = 417

 Score =  225 bits (574), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 62/384 (16%), Positives = 120/384 (31%), Gaps = 25/384 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K      + + + +   G    S  E
Sbjct: 26  GTPAYIYSRATLERHWYAFDNALGDHPHLICFAVKSNPNIAILNIMAKLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +          +   ++   K  +  A             + ++L +    A+K+ K   
Sbjct: 86  LERVLFAGGDPKKVVFSGVAKSEQEIARALEVGIRCFNVESAAELIRINQVARKMGKIAS 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           I LR+NP V              ++ G   +   E   +        + G+  H   +  
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVEQAREVYRQASQLENIKIVGIDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFSE 223
               F         + ++       +E + LGGG+  T       +P +     L++   
Sbjct: 206 ELQPFLDATDRLIVLMEQLKKDGITLEHVDLGGGLGVTYSDEKAPHPSEYATALLEKLKN 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
             +++I LEPG AI  N   L T V  I     ++  IVD+ +   +   L       I 
Sbjct: 266 YQNLEIILEPGRAITANAGILLTRVEYIKSNESRHFAIVDTGMNDMIRPALYQAYMNIIE 325

Query: 283 PNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +           V G  C   D  G+      +  GD I       Y  +  + +N   
Sbjct: 326 VDRTLSRETKVYDVVGPICETSDFLGKQRSLA-IAQGDFIVQRSAGAYGASMASTYNSRP 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362
                + + +      R   + + 
Sbjct: 385 RAIEIMVDGEQVHLIKRREEFAEL 408


>gi|332300309|ref|YP_004442230.1| carboxynorspermidine decarboxylase [Porphyromonas asaccharolytica
           DSM 20707]
 gi|332177372|gb|AEE13062.1| carboxynorspermidine decarboxylase [Porphyromonas asaccharolytica
           DSM 20707]
          Length = 388

 Score =  225 bits (574), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 110/378 (29%), Positives = 193/378 (51%), Gaps = 16/378 (4%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TPYYL+++  L  NL+    + + AGV+++LA K +A W  F    +Y+  +T+SS +E 
Sbjct: 11  TPYYLLEESLLRRNLELIRSVAERAGVEIILAFKAYALWRTFPIFKEYIHASTASSPWEA 70

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IGLR 121
            LG+E+ G   HAY  AY +  I   +     I  N+ +Q  +F   +    ++   GLR
Sbjct: 71  RLGYEEMGAPVHAYTPAYSEDNITDFVHYSSHITLNSPTQWQRFGPASPYAAEQISYGLR 130

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLMFHNNCENKSFLCFSA 177
           +N + S  K  + +P  P +R G   +   + E +     + G+  H  CE         
Sbjct: 131 LNLAYSPVKTEIYNPALPGTRFGVSAETLRQMEQEGALTGLEGVHLHVLCE-GDDEQLEL 189

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEA 236
           +L+ +E+ FG  + +++W++LGGG   T ++Y  +     L+ F E++   ++ +EPG A
Sbjct: 190 VLERLEERFGFILDKVQWLNLGGGHLMTHREYDTEHLVALLRAFRERHPNLRVIMEPGSA 249

Query: 237 IVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESA-------TIYPNTGPY 288
               T  L   V+DI  N      I++ S   H+PD L                P  G +
Sbjct: 250 FAWQTGDLYAQVVDIVTNDGIKTAIMNVSFACHMPDCLEMPYHPVVEGATQCDTPEAGTH 309

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348
           +  + G SCL+GD  G + F+ P++IG+ +  +D+  Y   + N FNG+  P IA++++D
Sbjct: 310 SYRLGGNSCLSGDYMGYWTFDHPLEIGETLVLKDMLHYTTVKTNMFNGVQHPAIALRHLD 369

Query: 349 GTIKAIREFSYNDYYNNL 366
           G+++ +R F Y+DY + +
Sbjct: 370 GSVEMLRSFDYSDYKSRM 387


>gi|296109111|ref|YP_003616060.1| diaminopimelate decarboxylase [Methanocaldococcus infernus ME]
 gi|295433925|gb|ADG13096.1| diaminopimelate decarboxylase [Methanocaldococcus infernus ME]
          Length = 431

 Score =  225 bits (574), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 70/396 (17%), Positives = 131/396 (33%), Gaps = 33/396 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG------VKLLLALKCFAAWGMFDTLNQYMDGTT 56
            TP Y++ ++++  N +  +   K           L  A K  +   +   L +   G  
Sbjct: 28  GTPLYIMSEEQIKINFNRYVEAFKRYEEETGKEFILAYAYKANSNLAITKLLAKLGSGAD 87

Query: 57  SSSLYEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQK 113
             S  E+ +    +   E   +N   K  E   +    +      +++S+L    + A++
Sbjct: 88  VVSGGELYIAKLSQVPSEKIVFNGNCKIREEIIMGIESEIRAFNVDSISELIMINEIAKE 147

Query: 114 L--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFH 164
           L     +  RINP V              ++ G   K  +++    +        GL  H
Sbjct: 148 LGKEANVAFRINPDVDPKTHPKISTGLKKNKFGLDTKTALKAIDMALKMENINFVGLHCH 207

Query: 165 NNCENKSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTD---------KDYPVK 212
              +      F    K + +          ++  ++LGGG+             KDY   
Sbjct: 208 IGSQLTDVSPFVEATKKMMEFILKLKEKNIEVRDLNLGGGLGIPYHKDKEIPTVKDYANS 267

Query: 213 DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPD 271
                LK   +     + +EPG +IV     L   V  I E      V++D+ +   +  
Sbjct: 268 IIETILKFKDKVEMPNLIIEPGRSIVATAGYLVGKVWHIKETEVTKWVMIDAGMNDLMRP 327

Query: 272 YLLYQESATIYPNTG--PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
            +                    V G  C + D+FG       V++GD I   D   Y I+
Sbjct: 328 AMYDAYHHMENAKVKGEKEKVSVAGGLCESSDVFGRDREIDKVEVGDYIVIFDAGAYGIS 387

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
             N +N    P + + +  G        +++D    
Sbjct: 388 MSNNYNSRGRPRMILTSKKGVYIIRERETFSDLIAK 423


>gi|189499930|ref|YP_001959400.1| diaminopimelate decarboxylase [Chlorobium phaeobacteroides BS1]
 gi|189495371|gb|ACE03919.1| diaminopimelate decarboxylase [Chlorobium phaeobacteroides BS1]
          Length = 416

 Score =  225 bits (574), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 70/386 (18%), Positives = 121/386 (31%), Gaps = 23/386 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++  +  L+N   +              ++K      +  TL     G   +S  E
Sbjct: 29  GTPLFVTSRNSLVNQYRSFEKAFALLDHLTCYSVKANFNLHIIRTLAAEGCGFDVNSGGE 88

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIF--NTVSQLNKFKDKAQKL--HKK 117
           +                   K         +   ++    ++S+L    + A +L     
Sbjct: 89  LYRALQAGADPAKIIMAGVGKSAAEIEYAISSGILMLKTESLSELRLIDEIAGRLGVQAS 148

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           +G+R+NP+V+              + G    D  +        +  N+  L  H   +  
Sbjct: 149 VGIRVNPNVTAETHPYITTGDSKEKFGIDETDLAQVFSLIGAMDHVNLTALDMHIGSQIF 208

Query: 171 SFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               + A  + +             I +  +GGG   T        P+  F ++L    E
Sbjct: 209 DTEFYHAASEKLLDVLAVARSAGFAIRYFDIGGGFPVTYDPQKPATPIGHFAEKLIPLLE 268

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDYLLYQESATI 281
           K    I  EPG  I  N+T L T VL    N   K  VIVD+ +   +   L       +
Sbjct: 269 KAGTTILFEPGRFIAANSTVLVTRVLYRKRNHAGKEFVIVDAGMTELIRPALYQSHHEIV 328

Query: 282 YPNTGP--YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                     A V G  C +GD F        V  G+ ++      Y     N +NG   
Sbjct: 329 AVKPHDSMMVADVVGPVCESGDFFARARTIDAVGEGELLAVLSSGAYGSVMGNNYNGRLR 388

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365
           P   + + D      +  ++     N
Sbjct: 389 PAEVMVDGDDATLIRKRDTFEQLIQN 414


>gi|115445929|ref|NP_001046744.1| Os02g0440000 [Oryza sativa Japonica Group]
 gi|75294265|sp|Q6ZG77|DCDA_ORYSJ RecName: Full=Probable diaminopimelate decarboxylase,
           chloroplastic; Short=DAP decarboxylase; Flags: Precursor
 gi|46805542|dbj|BAD16980.1| putative diaminopimelate decarboxylase [Oryza sativa Japonica
           Group]
 gi|113536275|dbj|BAF08658.1| Os02g0440000 [Oryza sativa Japonica Group]
 gi|215695077|dbj|BAG90268.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 490

 Score =  225 bits (574), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 67/393 (17%), Positives = 124/393 (31%), Gaps = 29/393 (7%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+YL  K +++ N        +     +  A+K      +   L +   G    S  E+
Sbjct: 97  TPFYLYSKPQVVRNFTAYRDALEGLRSIVGYAVKANNNLRVLQLLRELGCGAVLVSGNEL 156

Query: 64  MLG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIG 119
            L     F      +N       ++     +   +  ++   L      A+       + 
Sbjct: 157 RLALRAGFDPTRCIFNGNGKTLEDLVLAAESGVFVNIDSEFDLENIVTAARVAGKKVPVL 216

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLMFHNNCENKS 171
           LRINP V              S+ G + +            S    + G+  H       
Sbjct: 217 LRINPDVDPQVHPYVATGNKTSKFGIRNEKLQWFLDSIKSYSNDITLVGVHCHLGSTITK 276

Query: 172 FLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEFSE 223
              F      +            ++E++++GGG+               D    ++E   
Sbjct: 277 VDIFRDAAGLMVNYVDEIRAQGFELEYLNIGGGLGIDYHHTDAVLPTPMDLINTVRELVL 336

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-HVPDYLLYQESATIY 282
              + + +EPG +++ NT      V  +  N     IV     A  +   L         
Sbjct: 337 SRDLTLIIEPGRSLIANTCCFVNRVTGVKSNGTKNFIVVDGSMAELIRPSLYGAYQHIEL 396

Query: 283 PNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +  P     T  + G  C + D  G+         G  +   D   Y ++  + +N   
Sbjct: 397 VSPSPDAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDAGAYCMSMASTYNLKL 456

Query: 339 MPTIAVKNVDGTIKAIRE-FSYND---YYNNLS 367
            P       DG+I  IR   S++D   +++NLS
Sbjct: 457 RPPEYWVEDDGSIAKIRRGESFDDYMKFFDNLS 489


>gi|15611345|ref|NP_222996.1| diaminopimelate decarboxylase [Helicobacter pylori J99]
 gi|8134398|sp|Q9ZME5|DCDA_HELPJ RecName: Full=Diaminopimelate decarboxylase; Short=DAP
           decarboxylase
 gi|4154810|gb|AAD05866.1| DIAMINOPIMELATE DECARBOXYLASE [Helicobacter pylori J99]
          Length = 405

 Score =  225 bits (574), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 73/385 (18%), Positives = 128/385 (33%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP+YL D  K+           K     +  ALK  +   +   L     G    S+ E
Sbjct: 12  KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLANLGSGADCVSIGE 71

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++   K        +  N   +   +  +L   +  AQ L  K  
Sbjct: 72  IQRALKAGIKPYKIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIETIAQSLGIKAR 131

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           +  RINP++              ++ G + K+ +E       S       + FH   +  
Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVEEKEALEMFLWAKKSAFLEPVSVHFHIGSQLL 191

Query: 171 SFLCF---SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224
                   S  +  I K        + +  +GGGI  + ++       D+ Q +    + 
Sbjct: 192 DLDPITEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILNSLQG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESAT--I 281
             + I  EPG +IV  +  L T VL       K  VIVD+ +   +   L + + A   I
Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVI 311

Query: 282 YPNTGPY--TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            P  G       V G  C + D F +      ++ GD+++ E V  Y  +  + +N    
Sbjct: 312 TPCGGREISPCDVVGPVCESSDTFLKDANLPELEPGDKLAIEKVGAYGSSMASQYNSRPK 371

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
                          +  +  D + 
Sbjct: 372 LLELALEDHKIRVIRKREALEDLWR 396


>gi|167838175|ref|ZP_02465034.1| diaminopimelate decarboxylase [Burkholderia thailandensis MSMB43]
          Length = 423

 Score =  225 bits (574), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 57/389 (14%), Positives = 120/389 (30%), Gaps = 27/389 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++  +  L    +            + +A+K  +  G+ +   +   G    S  E
Sbjct: 28  GTPLFVYSRAALTAAYEAYAKACAGRRASIHVAVKANSNLGVLNVFARLGAGFDIVSGGE 87

Query: 63  VMLGHEKFG-GETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G  +   ++      D    A+ +        ++ +L++    A  L     
Sbjct: 88  LARVLAAGGRAQNVVFSGVGKNADEMRIALEAGVKCFNVESIPELDRLNAVAASLGKRAP 147

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D   +           V G+  H   +  
Sbjct: 148 VSLRVNPDVDPKTHPYISTGLKANKFGIAFDDARATYRAAAALPNLEVVGIDCHIGSQIT 207

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               +   +    ++ ++      +I  + +GGG+  T  D    D    ++   E+   
Sbjct: 208 ELSPYLDAIDKLLDLVEQIEADGVKIGHVDVGGGLGITYDDETPPDIGAYVRAVLERIDA 267

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                 +I+ EPG ++  N   L T V  + +   KN  IVD+++       +     A 
Sbjct: 268 RGHGHREIWFEPGRSLTGNAGILLTRVEFLKQGEEKNFAIVDAAMNDLARPAMYQAFHAI 327

Query: 281 ----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                  +       V G  C +GD  G       +  GD ++      Y     + +N 
Sbjct: 328 EPVTPRMDVAAAVYDVVGPVCESGDWLGRGRSLA-IAPGDLLAIRSAGAYGFTMSSNYNT 386

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYNN 365
                  + +           +    +  
Sbjct: 387 RPRAAEVIVDGANAHLVRPRETVESLFER 415


>gi|78776669|ref|YP_392984.1| diaminopimelate decarboxylase [Sulfurimonas denitrificans DSM 1251]
 gi|78497209|gb|ABB43749.1| diaminopimelate decarboxylase [Sulfurimonas denitrificans DSM 1251]
          Length = 403

 Score =  225 bits (573), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 62/384 (16%), Positives = 121/384 (31%), Gaps = 22/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP Y+ D   +    +      K     +  A+K  +   +         G    S+ E
Sbjct: 12  KTPLYVYDLDYMSAQYEELKSAFKGRKSIMAFAIKSNSNLSVIKHFATLGSGADCVSIGE 71

Query: 63  V-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
           V              ++   K  +        D   I   + ++L + +  A++L  K  
Sbjct: 72  VYRAVLAGVPNYKIIFSGVGKSDDEITQAIKLDILYINVESEAELGRVELIAKELGAKCR 131

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNC--- 167
           +  R+NP++              ++ G +             SE  +  G+ FH      
Sbjct: 132 ISIRVNPNIDPQTHPYISTGLHDNKFGVEIDTAKRMYIKANNSEYLDPVGIHFHIGSQLT 191

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP---VKDFCQRLKEFSEK 224
           E K     + ++ ++ +   +   ++++  +GGG+    KD       D+ Q +    + 
Sbjct: 192 ELKPIYESAEIVADLVRSLQNIKIELKFFDIGGGLGVKYKDETTITPYDYAQAILSTLKG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES---AT 280
             + +  EPG  +  N     T VL       K  V+VD  +   +   L        A 
Sbjct: 252 LDLTVICEPGRFLTANGGYFLTKVLYEKRNGDKRFVVVDGGMNDLLRPSLYKAYHKIEAI 311

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
               T    A V G  C +GD F + +    ++  D +       Y     + +N     
Sbjct: 312 TESLTKLSEADVVGPVCESGDFFAKGYLLPTLEHNDLLVIHSAGAYGFGMGSNYNTRGRS 371

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
                         +   + D   
Sbjct: 372 AEVAIKGKEVKLIRKREEFEDLIA 395


>gi|323527565|ref|YP_004229718.1| diaminopimelate decarboxylase [Burkholderia sp. CCGE1001]
 gi|323384567|gb|ADX56658.1| diaminopimelate decarboxylase [Burkholderia sp. CCGE1001]
          Length = 420

 Score =  225 bits (573), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 58/387 (14%), Positives = 122/387 (31%), Gaps = 26/387 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L +  +            + +A+K  +   + +   +   G    S  E
Sbjct: 28  GTPLYVYSRAALTDAWNAYAGACAGRRASVHVAVKANSNLAVLNVFARLGAGFDIVSGGE 87

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +          E   ++    + D   +A+ +        ++ +L++    A ++ +   
Sbjct: 88  LARVLAAGGKAENTVFSGVGKHADEMREALAAGVKCFNVESIPELDRLNAVAAQMDRKAP 147

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LR+NP V              ++ G   +D   +           V G+  H   +  
Sbjct: 148 VSLRVNPDVDAKTHPYISTGLKSNKFGVAFEDARATYQAAAAMANLEVVGIDCHIGSQIT 207

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               +   +     + ++       I  I +GGG+  T  D    D    +    ++   
Sbjct: 208 EVAPYLDAVDKLLELVEQIEQDGLTIRHIDVGGGLGITYDDETPPDIGDFVSTVLDRIEA 267

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278
                 ++Y EPG ++V N   L T V  +     KN  IVD+++       +       
Sbjct: 268 RGHGHREVYFEPGRSLVGNAGVLLTRVEFLKPGAEKNFAIVDAAMNDLARPAMYEAYHVI 327

Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
            A +      +   V G  C +GD  G       V+ GD ++      Y     + +N  
Sbjct: 328 DAAVQREVPAHVYDVVGPVCESGDWLGRERLLS-VEPGDLLAIRSAGAYGFVMSSNYNTR 386

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
                 + +                + 
Sbjct: 387 PRAAEVMVDGTQAHVVRAREEVQQLFA 413


>gi|239814143|ref|YP_002943053.1| diaminopimelate decarboxylase [Variovorax paradoxus S110]
 gi|239800720|gb|ACS17787.1| diaminopimelate decarboxylase [Variovorax paradoxus S110]
          Length = 427

 Score =  225 bits (573), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 54/387 (13%), Positives = 113/387 (29%), Gaps = 26/387 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++  KQ +L+ L       +     +  A+K  ++ G+     +   G    S  E
Sbjct: 36  GTPLFVYSKQWMLDALAAYQRGFEGRSALICYAMKANSSLGVLRVFAEAGCGFDIVSGGE 95

Query: 63  VMLGHE-KFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKK 117
           +              ++   K       A+ +        + ++L+   +   A+     
Sbjct: 96  LARVLAVGADPARIIFSGVGKTRAEMRQALAAGIACFNVESEAELDVLNEVALAEGRRAP 155

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           I +RINP+V              ++ G      +E+           V G+  H   +  
Sbjct: 156 ISIRINPNVDPKTHPYISTGLKGNKFGIAHDRAVEAYRHAARLPGLEVVGIDCHIGSQIT 215

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               +        ++ +        I  +  GGG+                ++   +   
Sbjct: 216 EASPYLDACDRVLDLVEAIEAAGVPIHHLDFGGGLGIDYNGEVPPKADALWQQLLARLDA 275

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES-- 278
                 ++ +EPG ++V N     T VL           + D+++       +       
Sbjct: 276 RGFGQRKLVIEPGRSLVGNAGVCLTEVLYTKPGEDKNFCIVDAAMNDLPRPAMYQAFQKI 335

Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                      T  V G  C +GD  G       V  GD ++      Y ++  + +N  
Sbjct: 336 VPLRIRAGDAPTYDVVGPVCESGDWIGRDRALNVVS-GDLLAVLSAGAYCMSMASNYNTR 394

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
                 + +        R  +  D   
Sbjct: 395 GRAAEVLVSGRSATLIRRRETMEDQLR 421


>gi|159041106|ref|YP_001540358.1| diaminopimelate decarboxylase [Caldivirga maquilingensis IC-167]
 gi|157919941|gb|ABW01368.1| diaminopimelate decarboxylase [Caldivirga maquilingensis IC-167]
          Length = 402

 Score =  225 bits (573), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 65/373 (17%), Positives = 116/373 (31%), Gaps = 19/373 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP  + D   +  N  +          K+L ++K      +   L +   G  ++S  E
Sbjct: 20  DTPLIVYDLNLIEGNYRSIKDSL---NAKVLYSIKANPNLAILAFLRRLGSGADAASPGE 76

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           V L     F      Y  AY         + +   + F++V    +      +       
Sbjct: 77  VFLALKAGFKPSEVLYTGAYLSNNDIKYGIDSRVVLNFDSVRAFERAMALGYRPRLVF-F 135

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVN--GLMFHNNCENKSFLC 174
           RI+                 S+ G    D I++        V   G+         +   
Sbjct: 136 RIDLGYGEGFTPGVTLAGEESKFGMFLNDAIKAYRLAKSNGVKEFGIHAMMGSNVLNPDY 195

Query: 175 FSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY 230
           F  + + ++++     G    +I +  +GGG     K         RL      +  +++
Sbjct: 196 FLKIAELLKEQAKVIEGEVGIKISYFDMGGGFGIPYKPGEKPLDLNRLSALRGFFPGELW 255

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATIYPNTGP-- 287
           +EPG  IV N   L T V ++ +      I VD  +   +   L       I  N G   
Sbjct: 256 VEPGRFIVGNAGYLLTRVTEVKKKGNRTYIGVDVGMNVLIRPMLYNAYHHIITCNEGEGS 315

Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
               V G  C   D          VK GD +   +   Y  +  + +NG   P   V   
Sbjct: 316 EIVDVVGPICENTDKLAINRELPRVKEGDLLVILNAGAYVYSMSSNYNGRLRPAEVVVYN 375

Query: 348 DGTIKAIREFSYN 360
           +    +    + +
Sbjct: 376 NEHAVSRFRETLD 388


>gi|329847898|ref|ZP_08262926.1| diaminopimelate decarboxylase [Asticcacaulis biprosthecum C19]
 gi|328842961|gb|EGF92530.1| diaminopimelate decarboxylase [Asticcacaulis biprosthecum C19]
          Length = 458

 Score =  225 bits (573), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 60/400 (15%), Positives = 118/400 (29%), Gaps = 37/400 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVK---------LLLALKCFAAWGMFDTLNQYM 52
           + TP Y+     L  + +        +            +  A+K  +   +  TL    
Sbjct: 25  VGTPVYVYSSATLERHYNVFAGALNASPALRSPKGEAPLVAYAMKANSNLAVLRTLALQG 84

Query: 53  DGTTSSSLYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKD 109
            G  + S  E+          E   ++   K     A         +   +  +L++   
Sbjct: 85  CGADTVSEGEIRKAMTAGVPAEKIVFSGVGKTDAEMAFALKAGIYQLNVESRPELDRLAR 144

Query: 110 KAQ--KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-----SEIKNV--NG 160
            A    +     +RINP V               + G   ++ ++     +  +N+   G
Sbjct: 145 VAASLNMIAPFVIRINPGVGSGGHAKITTGGARDKFGISAEEALKLYADAAAHRNLAPVG 204

Query: 161 LMFHNNCENKSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKDYPVKDF--- 214
           +  H   +        A    ++            +E + LGGG+     + P       
Sbjct: 205 IACHIGSQITDLTPLQAAFSRMKGWVEALRAEGLSVERLDLGGGLGVPYFNQPAPPHPVD 264

Query: 215 -CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV---DSSVEAHVP 270
             +          ++   EPG  I  N   L + V+ + E I +       D+++   + 
Sbjct: 265 FAEMAALTVGHLGLRYTFEPGRVIAANAGVLVSRVVHVHERIDSGQKFLVLDAAMNDLIR 324

Query: 271 DYLLYQESATIYPNTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              LY     I P   P         V G  C  GD F        ++ G+ ++F     
Sbjct: 325 PA-LYDAYHDIRPVAAPTNDDSDIYDVVGPVCETGDTFTRNRELPRLRAGELVAFMSAGA 383

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y     + +N   +    +    G        SY++    
Sbjct: 384 YGAVMGSEYNSRPLAPEVLVRDGGFAVVRPRPSYDEMMAR 423


>gi|57168450|ref|ZP_00367584.1| diaminopimelate decarboxylase [Campylobacter coli RM2228]
 gi|305432869|ref|ZP_07402027.1| diaminopimelate decarboxylase [Campylobacter coli JV20]
 gi|57020258|gb|EAL56932.1| diaminopimelate decarboxylase [Campylobacter coli RM2228]
 gi|304444023|gb|EFM36678.1| diaminopimelate decarboxylase [Campylobacter coli JV20]
          Length = 402

 Score =  225 bits (573), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 63/384 (16%), Positives = 129/384 (33%), Gaps = 22/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+Y+ D   +           K    ++  A+K  +   +   L +   G    S+ E
Sbjct: 11  QTPFYIYDFDFIKERFLKLKNAFKARKSQIFYAVKANSNLSLLQMLVKLDSGFDCVSIGE 70

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
           V              ++   K  E   +    D   I   + +++   +  A++L+ K  
Sbjct: 71  VKRALKAGAKSYKIIFSGVGKTQEELRLALEYDILYINLESEAEMMLLESVAKELNLKAR 130

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCE-- 168
           +  R+NP+V+             ++ G +     +              G+ FH   +  
Sbjct: 131 ISIRVNPNVNAKTHPYISTGLNENKFGVEIDLARKMYLYAKNSPHLEPIGVHFHIGSQLL 190

Query: 169 -NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV----KDFCQRLKEFSE 223
                   +A++  + +E      ++++  +GGG+    +   V     D+ Q +     
Sbjct: 191 DISPIHEAAAIVAKLVRELKALQIELKFFDIGGGLGVRYEKEDVEPDLYDYAQGILAQLH 250

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
              V I +EPG  +V N+     +VL       K  VIVD ++   +   L       + 
Sbjct: 251 GLDVTIGMEPGRFLVANSGEFVCSVLYEKHNKTKRFVIVDGAMNDLIRPSLYEAYHEILL 310

Query: 283 PNTGPY--TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
           P          V G  C +GD F +       + GD +  ++   Y  +  + +N  N  
Sbjct: 311 PYNQGEESPCDVVGGICESGDFFAKARSLPSTQSGDIMVIKNTGAYGFSMSSNYNTRNKV 370

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
                         +  ++ D   
Sbjct: 371 CELALEEGQVRLIRQRENFEDQIA 394


>gi|313886522|ref|ZP_07820238.1| carboxynorspermidine decarboxylase [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|312924068|gb|EFR34861.1| carboxynorspermidine decarboxylase [Porphyromonas asaccharolytica
           PR426713P-I]
          Length = 388

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 110/378 (29%), Positives = 192/378 (50%), Gaps = 16/378 (4%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TPYYL+++  L  NL+    + + AGV+++LA K +A W  F    +Y+  +T+SS +E 
Sbjct: 11  TPYYLLEESLLRRNLELIRSVAERAGVEIILAFKAYALWRTFPIFKEYIHASTASSPWEA 70

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IGLR 121
            LG+E+ G   HAY  AY +  I   +     I  N+ +Q  +F   +    +    GLR
Sbjct: 71  RLGYEEMGAPVHAYTPAYSEDNITDFVRYSSHITLNSPTQWQRFGPASPYAAEHISYGLR 130

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLMFHNNCENKSFLCFSA 177
           +N + S  K  + +P  P +R G   +   + E +     + G+  H  CE         
Sbjct: 131 LNLAYSPVKTEIYNPALPGTRFGVSAETLRQMEQEGTLTGLEGVHLHVLCE-GDDEQLEL 189

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEA 236
           +L+ +E+ FG  + +++W++LGGG   T ++Y  +     L+ F E++   ++ +EPG A
Sbjct: 190 VLERLEERFGFILDKVQWLNLGGGHLMTHREYDTEHLVALLRAFRERHPNLRVIMEPGSA 249

Query: 237 IVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESA-------TIYPNTGPY 288
               T  L   V+DI  N      I++ S   H+PD L                P  G +
Sbjct: 250 FAWQTGDLYAQVVDIVTNDDIKTAIMNVSFACHMPDCLEMPYHPVVEGATQCDTPEAGTH 309

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348
           +  + G SCL+GD  G + F+ P++IG+ +  +D+  Y   + N FNG+  P IA++++D
Sbjct: 310 SYRLGGNSCLSGDYMGYWTFDHPLEIGETLVLKDMLHYTTVKTNMFNGVQHPAIALRHLD 369

Query: 349 GTIKAIREFSYNDYYNNL 366
           G+++ +R F Y+DY + +
Sbjct: 370 GSVEMLRSFDYSDYKSRM 387


>gi|167582586|ref|ZP_02375460.1| diaminopimelate decarboxylase [Burkholderia thailandensis TXDOH]
          Length = 423

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 58/389 (14%), Positives = 121/389 (31%), Gaps = 27/389 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++  +  L    +            + +A+K  +  G+ +   +   G    S  E
Sbjct: 28  GTPLFVYSRAALTAAYEAYAKACAGRRASIHVAVKANSNLGVLNVFARLGAGFDIVSGGE 87

Query: 63  VMLGHEKFG-GETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G  +   ++   K  D    A+ +        ++ +L++    A  L     
Sbjct: 88  LARVLAAGGRAQNVVFSGVGKSADEMRIALEAGVKCFNVESIPELDRLNAVAASLGKRAP 147

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D   +           V G+  H   +  
Sbjct: 148 VSLRVNPDVDPKTHPYISTGLKANKFGIAFDDARATYRAAAALPNLEVVGIDCHIGSQIT 207

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               +   +    ++ ++      +I  + +GGG+  T  D    D    ++   E+   
Sbjct: 208 ELSPYLDAIDKLLDLVEQIEADGVKIHHVDVGGGLGITYDDETPPDIGAYVRAVLERIDA 267

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                 +I+ EPG ++  N   L T V  + +   KN  IVD+++       +     A 
Sbjct: 268 RGHGHREIWFEPGRSLTGNAGILLTRVEFLKQGEEKNFAIVDAAMNDLARPAMYQAFHAI 327

Query: 281 ----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                  +       V G  C +GD  G       +  GD ++      Y     + +N 
Sbjct: 328 EPVTPRTDVAAAVYDVVGPVCESGDWLGRDRSLA-IAPGDLLAIRSAGAYGFTMSSNYNT 386

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYNN 365
                  + +           +    +  
Sbjct: 387 RPRAAEVIVDGASAYLVRPRETVESLFER 415


>gi|294791044|ref|ZP_06756202.1| diaminopimelate decarboxylase [Scardovia inopinata F0304]
 gi|294458941|gb|EFG27294.1| diaminopimelate decarboxylase [Scardovia inopinata F0304]
          Length = 444

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 58/406 (14%), Positives = 118/406 (29%), Gaps = 44/406 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP    D  ++  N        + A ++  +  A K F+   +++ ++Q        S 
Sbjct: 28  GTPVIAYDVSRIRRNYRAFRQAFEKAKIRSVISYASKAFSCKAVYNLIDQEGGHVDVVSG 87

Query: 61  YEVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--- 114
            E+       F  E  +++     ++    A+ S    II +   ++   ++        
Sbjct: 88  GELATALAAGFPPERISFHGNNKSQEELTFALKSKVGLIIIDNFHEIELLQNMLPSPRSA 147

Query: 115 ------HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVN 159
                    I LRI P VS          +  S+ G               +      + 
Sbjct: 148 HRDQVEPAHIMLRITPGVSAHTHDYISTGQTDSKFGFDLASGQADRALQKVLADSRFCME 207

Query: 160 GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWI----SLGGGIHFTDKDYPVKDFC 215
           G+  H   +      F A+ + +      +     +     +LGGG           D  
Sbjct: 208 GIHAHIGSQIFDPYAFQALARIMINLAARWRRDFGYCAQSVNLGGGFGIAYNQEDDPDDV 267

Query: 216 QRLKEFSEKYSVQ-----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS 264
           +   +       Q           +++EPG ++V +      TV    +       +   
Sbjct: 268 EDFVQSLSSSIRQAAADLSFPLPTVWIEPGRSLVGSAACTLYTVGSRKDIPGYNSYIFVD 327

Query: 265 --VEAHVPDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRI 318
             +  ++   L                   T  + G+ C +GD+          + GD +
Sbjct: 328 GGMGDNIRPALYRARYQAFLAKNPVGRPAETVRIAGKYCESGDVLCWDQALPQTQPGDIL 387

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +      Y  +  + +N    P +           IR  SY D   
Sbjct: 388 AIPATGAYGYSMASNYNRNPRPAVVFVEDGHPQLVIRRESYEDLIR 433


>gi|332290670|ref|YP_004429279.1| diaminopimelate decarboxylase [Krokinobacter diaphorus 4H-3-7-5]
 gi|332168756|gb|AEE18011.1| diaminopimelate decarboxylase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 401

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 66/386 (17%), Positives = 120/386 (31%), Gaps = 27/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            +P Y+ D + +    +      K+   ++L  A+K  +   +   L     G  + S+ 
Sbjct: 14  GSPVYVYDAETITAQYNRLTNAFKDVKQLRLNYAVKALSNISILQHLKSLGSGLDTVSIQ 73

Query: 62  EVMLGH-EKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           EV LG    F  +   +        EI+ V      I  + +S L +F  K       + 
Sbjct: 74  EVQLGLLAGFTPDRIIFTPNGVSLAEIEEVAQMGVQINIDNLSILEQFGTK--HPQIPVC 131

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFL 173
           +R+NP V              S+ G                  N+NG+  H   +     
Sbjct: 132 IRVNPHVMAGGNTNISVGHIDSKFGISIHQLPHVLRIVENTGMNINGIHMHTGSDILDID 191

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY--- 230
            F    + I  +     + + +I  G G     K+  ++   + L E   K         
Sbjct: 192 VFVYATE-ILFDAAQKFSDLTFIDFGSGFKVPYKEGDIETNIEELGEKLGKRFNAFAKSY 250

Query: 231 -------LEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESA--T 280
                   EPG+ +V+        V  + +        VDS     +   L   +     
Sbjct: 251 GKPLTLTFEPGKFLVSEAGKFLVQVNVVKQTTSTVFAQVDSGFNHLIRPMLYGSQHEIRN 310

Query: 281 IYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
           I    G      V G  C   D F        +  GD ++F++   Y     + +N    
Sbjct: 311 ISNPKGRERFYSVVGYICET-DTFANNRRISEISEGDILAFDNAGAYCFTMASNYNSRYR 369

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365
           P   +          +  ++ D  +N
Sbjct: 370 PAEVLIKNGEAHLIRKRETFEDLISN 395


>gi|315150595|gb|EFT94611.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0012]
          Length = 436

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 60/397 (15%), Positives = 129/397 (32%), Gaps = 37/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP ++ D   +              G+K  ++ A K F+   ++  L +        S 
Sbjct: 35  GTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYASKAFSCLAIYQVLKEEDIACDVVSG 94

Query: 61  YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDK--AQKLH 115
            E+    +      E   +       E+   L N   TI+ +   +++  ++    +   
Sbjct: 95  GELFTALKGGMEPAEIEFHGNNKTPEELRYALDNKIGTIVIDNFYEIDLLEELLATRNQT 154

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           +K+  R++P V           +  S+ G         E     + +   +V G+  H  
Sbjct: 155 QKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASGQATEALVRLLSNPSFDVQGVHCHIG 214

Query: 167 CENKSFLCFSAMLKNIEKEFGHFI----TQIEWISLGGGIHFTDKDYPVK----DFCQRL 218
            +  +   F A ++ +      +          +++GGG                F +++
Sbjct: 215 SQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLNMGGGFGVQYTQQDEPLAPATFVEKI 274

Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
               + +         ++++EPG +++    T   TV    E    ++ V VD  +  ++
Sbjct: 275 VYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIYTVGAQKEVPGVRHFVSVDGGMGDNI 334

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L         A    +       V G+ C +GD+         VK GD ++      
Sbjct: 335 RPALYQAVYDGFLANRDGHDSVKKVTVVGKYCESGDVLLRDVLLPEVKAGDLLAISSTGA 394

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
           Y  +  + +N    P +            R  +Y D 
Sbjct: 395 YGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYEDM 431


>gi|162453832|ref|YP_001616199.1| hypothetical protein sce5556 [Sorangium cellulosum 'So ce 56']
 gi|161164414|emb|CAN95719.1| unnamed protein product [Sorangium cellulosum 'So ce 56']
          Length = 435

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 56/392 (14%), Positives = 118/392 (30%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y  D +++  N        +     V +  A+K      +   L     G  ++S 
Sbjct: 21  GTPLYAYDAERIRENFRRLTRALRGNYPEVSVFYAIKACNNLEIAKLLVDEGSGVDAASP 80

Query: 61  YEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E+ L       GE   Y      D ++ A L        +    L +     +      
Sbjct: 81  NEIRLAQALGLSGERIIYTGNSLSDEDLAAGLRAGVNFNVDDHGILKRLFSIGKPRCMSF 140

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSF 172
            +  +         L     P ++ G   +   E+    +       G+    + +    
Sbjct: 141 RINPSGEDIA-TPDLKPFAGPSAKFGIHPRHVEEAYRTALENGVERLGVHMMPHSQAHKP 199

Query: 173 LCFSAML----KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF--------CQRLKE 220
             F+ +       I          + ++ +GGG+    +                  +++
Sbjct: 200 ENFAHVTGKLLDLIGPVARKLGFDLAFVDIGGGLGIPYRREQPPLDVEAVARGIAAMVRK 259

Query: 221 FSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
              ++     ++ +EPG   V +   +   V+ I +  K ++  D S+       +    
Sbjct: 260 KCAEHGLKEPRLVMEPGRYFVGDAGYVLGRVISIKQGYKTIIGTDISMNTMARPVMYGAY 319

Query: 278 SATIYPNTGPYTAMVC--GRSCLAGDIFGEFH-FEKPVKIGDRISFEDVAGYNINRKNWF 334
                   G  TA +   G+ C   D++     F   V  GD +   D   Y       +
Sbjct: 320 HEVRINGRGGQTAPMAMTGQVCENTDMWIPEREFPADVAEGDVVVLMDAGAYGHVMSYDY 379

Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366
           NG   P   + +   +    R  ++ D  + +
Sbjct: 380 NGRLRPAEVLIDGGKSRLIRRRDTFEDMVSRM 411


>gi|294779094|ref|ZP_06744505.1| diaminopimelate decarboxylase [Enterococcus faecalis PC1.1]
 gi|294453819|gb|EFG22210.1| diaminopimelate decarboxylase [Enterococcus faecalis PC1.1]
 gi|323480667|gb|ADX80106.1| diaminopimelate decarboxylase [Enterococcus faecalis 62]
          Length = 430

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 60/397 (15%), Positives = 129/397 (32%), Gaps = 37/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP ++ D   +              G+K  ++ A K F+   ++  L +        S 
Sbjct: 29  GTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYASKAFSCLAIYQVLKEEDIACDVVSG 88

Query: 61  YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDK--AQKLH 115
            E+    +      E   +       E+   L N   TI+ +   +++  ++    +   
Sbjct: 89  GELFTALKGGMEPAEIEFHGNNKTPEELRYALDNKIGTIVIDNFYEIDLLEELLTTRNQT 148

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           +K+  R++P V           +  S+ G         E     + +   +V G+  H  
Sbjct: 149 QKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASGQATEALVRLLSNPSFDVQGVHCHIG 208

Query: 167 CENKSFLCFSAMLKNIEKEFGHFI----TQIEWISLGGGIHFTDKDYPVK----DFCQRL 218
            +  +   F A ++ +      +          +++GGG                F +++
Sbjct: 209 SQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLNMGGGFGVQYTQQDEPLAPATFVEKI 268

Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
               + +         ++++EPG +++    T   TV    E    ++ V VD  +  ++
Sbjct: 269 VYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIYTVGAQKEVPGVRHFVSVDGGMGDNI 328

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L         A    +       V G+ C +GD+         VK GD ++      
Sbjct: 329 RPALYQAVYDGFLANREGHDSVKKVTVVGKYCESGDVLLRDILLPEVKAGDLLAISSTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
           Y  +  + +N    P +            R  +Y D 
Sbjct: 389 YGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYEDM 425


>gi|257416043|ref|ZP_05593037.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis AR01/DG]
 gi|257157871|gb|EEU87831.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis ARO1/DG]
          Length = 436

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 60/397 (15%), Positives = 129/397 (32%), Gaps = 37/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP ++ D   +              G+K  ++ A K F+   ++  L +        S 
Sbjct: 35  GTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYASKAFSCLAIYQVLKEEDIACDVVSG 94

Query: 61  YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDK--AQKLH 115
            E+    +      E   +       E+   L N   TI+ +   +++  ++    +   
Sbjct: 95  GELFTALKGGMEPAEIEFHGNNKTPEELRYALDNKIGTIVIDNFYEIDLLEELLATRNQT 154

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           +K+  R++P V           +  S+ G         E     + +   +V G+  H  
Sbjct: 155 QKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASGQATEALVRLLSNPSFDVQGVHCHIG 214

Query: 167 CENKSFLCFSAMLKNIEKEFGHFI----TQIEWISLGGGIHFTDKDYPVK----DFCQRL 218
            +  +   F A ++ +      +          +++GGG                F +++
Sbjct: 215 SQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLNMGGGFGVQYTQQDEPLAPATFVEKI 274

Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
               + +         ++++EPG +++    T   TV    E    ++ V VD  +  ++
Sbjct: 275 VYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIYTVGAQKEVPGVRHFVSVDGGMGDNI 334

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L         A    +       V G+ C +GD+         VK GD ++      
Sbjct: 335 RPALYQAVYDGFLANREGHDSVKKVTVVGKYCESGDVLLRDILLPEVKAGDLLAISSTGA 394

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
           Y  +  + +N    P +            R  +Y D 
Sbjct: 395 YGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYEDM 431


>gi|300861365|ref|ZP_07107452.1| diaminopimelate decarboxylase [Enterococcus faecalis TUSoD Ef11]
 gi|295112942|emb|CBL31579.1| diaminopimelate decarboxylase [Enterococcus sp. 7L76]
 gi|300850404|gb|EFK78154.1| diaminopimelate decarboxylase [Enterococcus faecalis TUSoD Ef11]
          Length = 430

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 60/397 (15%), Positives = 129/397 (32%), Gaps = 37/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP ++ D   +              G+K  ++ A K F+   ++  L +        S 
Sbjct: 29  GTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYASKAFSCLAIYQVLKEEDIACDVVSG 88

Query: 61  YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDK--AQKLH 115
            E+    +      E   +       E+   L N   TI+ +   +++  ++    +   
Sbjct: 89  GELFTALKGGMEPAEIEFHGNNKTPEELRYALDNKIGTIVIDNFYEIDLLEELLATRNQT 148

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           +K+  R++P V           +  S+ G         E     + +   +V G+  H  
Sbjct: 149 QKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASGQATEALVRLLSNPSFDVQGVHCHIG 208

Query: 167 CENKSFLCFSAMLKNIEKEFGHFI----TQIEWISLGGGIHFTDKDYPVK----DFCQRL 218
            +  +   F A ++ +      +          +++GGG                F +++
Sbjct: 209 SQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLNMGGGFGVQYTQQDEPLAPATFVEKI 268

Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
               + +         ++++EPG +++    T   TV    E    ++ V VD  +  ++
Sbjct: 269 VYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIYTVGAQKEVPGVRHFVSVDGGMGDNI 328

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L         A    +       V G+ C +GD+         VK GD ++      
Sbjct: 329 RPALYQAVYDGFLANREGHDSVKKVTVVGKYCESGDVLLRDILLPEVKAGDLLAISSTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
           Y  +  + +N    P +            R  +Y D 
Sbjct: 389 YGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYEDM 425


>gi|229545884|ref|ZP_04434609.1| diaminopimelate decarboxylase [Enterococcus faecalis TX1322]
 gi|255975909|ref|ZP_05426495.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis T2]
 gi|256853066|ref|ZP_05558436.1| diaminopimelate decarboxylase [Enterococcus faecalis T8]
 gi|256965181|ref|ZP_05569352.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis HIP11704]
 gi|257082601|ref|ZP_05576962.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis E1Sol]
 gi|257419240|ref|ZP_05596234.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis T11]
 gi|307273284|ref|ZP_07554530.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0855]
 gi|307278506|ref|ZP_07559580.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0860]
 gi|307291495|ref|ZP_07571378.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0411]
 gi|229308952|gb|EEN74939.1| diaminopimelate decarboxylase [Enterococcus faecalis TX1322]
 gi|255968781|gb|EET99403.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis T2]
 gi|256711525|gb|EEU26563.1| diaminopimelate decarboxylase [Enterococcus faecalis T8]
 gi|256955677|gb|EEU72309.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis HIP11704]
 gi|256990631|gb|EEU77933.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis E1Sol]
 gi|257161068|gb|EEU91028.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis T11]
 gi|306497455|gb|EFM66989.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0411]
 gi|306504849|gb|EFM74045.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0860]
 gi|306510269|gb|EFM79293.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0855]
 gi|315029577|gb|EFT41509.1| diaminopimelate decarboxylase [Enterococcus faecalis TX4000]
 gi|315144475|gb|EFT88491.1| diaminopimelate decarboxylase [Enterococcus faecalis TX2141]
 gi|315147212|gb|EFT91228.1| diaminopimelate decarboxylase [Enterococcus faecalis TX4244]
 gi|315160504|gb|EFU04521.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0645]
          Length = 436

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 60/397 (15%), Positives = 129/397 (32%), Gaps = 37/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP ++ D   +              G+K  ++ A K F+   ++  L +        S 
Sbjct: 35  GTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYASKAFSCLAIYQVLKEEDIACDVVSG 94

Query: 61  YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDK--AQKLH 115
            E+    +      E   +       E+   L N   TI+ +   +++  ++    +   
Sbjct: 95  GELFTALKGGMEPAEIEFHGNNKTPEELRYALDNKIGTIVIDNFYEIDLLEELLATRNQT 154

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           +K+  R++P V           +  S+ G         E     + +   +V G+  H  
Sbjct: 155 QKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASGQATEALVRLLSNPSFDVQGVHCHIG 214

Query: 167 CENKSFLCFSAMLKNIEKEFGHFI----TQIEWISLGGGIHFTDKDYPVK----DFCQRL 218
            +  +   F A ++ +      +          +++GGG                F +++
Sbjct: 215 SQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLNMGGGFGVQYTQQDEPLAPATFVEKI 274

Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
               + +         ++++EPG +++    T   TV    E    ++ V VD  +  ++
Sbjct: 275 VYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIYTVGAQKEVPGVRHFVSVDGGMGDNI 334

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L         A    +       V G+ C +GD+         VK GD ++      
Sbjct: 335 RPALYQAVYDGFLANREGHDSVKKVTVVGKYCESGDVLLRDILLPEVKAGDLLAISSTGA 394

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
           Y  +  + +N    P +            R  +Y D 
Sbjct: 395 YGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYEDM 431


>gi|229550075|ref|ZP_04438800.1| diaminopimelate decarboxylase [Enterococcus faecalis ATCC 29200]
 gi|255972853|ref|ZP_05423439.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis T1]
 gi|256619013|ref|ZP_05475859.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis ATCC
           4200]
 gi|256958924|ref|ZP_05563095.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis DS5]
 gi|257078955|ref|ZP_05573316.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis JH1]
 gi|257422677|ref|ZP_05599667.1| diaminopimelate decarboxylase [Enterococcus faecalis X98]
 gi|307271076|ref|ZP_07552359.1| diaminopimelate decarboxylase [Enterococcus faecalis TX4248]
 gi|307275020|ref|ZP_07556183.1| diaminopimelate decarboxylase [Enterococcus faecalis TX2134]
 gi|312900700|ref|ZP_07759997.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0470]
 gi|312951434|ref|ZP_07770331.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0102]
 gi|229304779|gb|EEN70775.1| diaminopimelate decarboxylase [Enterococcus faecalis ATCC 29200]
 gi|255963871|gb|EET96347.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis T1]
 gi|256598540|gb|EEU17716.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis ATCC
           4200]
 gi|256949420|gb|EEU66052.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis DS5]
 gi|256986985|gb|EEU74287.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis JH1]
 gi|257164501|gb|EEU94461.1| diaminopimelate decarboxylase [Enterococcus faecalis X98]
 gi|306508468|gb|EFM77575.1| diaminopimelate decarboxylase [Enterococcus faecalis TX2134]
 gi|306512574|gb|EFM81223.1| diaminopimelate decarboxylase [Enterococcus faecalis TX4248]
 gi|310630590|gb|EFQ13873.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0102]
 gi|311292181|gb|EFQ70737.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0470]
 gi|315033910|gb|EFT45842.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0017]
 gi|315036920|gb|EFT48852.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0027]
 gi|315152542|gb|EFT96558.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0031]
 gi|315155821|gb|EFT99837.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0043]
 gi|315158012|gb|EFU02029.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0312]
 gi|315166786|gb|EFU10803.1| diaminopimelate decarboxylase [Enterococcus faecalis TX1341]
 gi|327535074|gb|AEA93908.1| diaminopimelate decarboxylase [Enterococcus faecalis OG1RF]
          Length = 436

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 60/397 (15%), Positives = 129/397 (32%), Gaps = 37/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP ++ D   +              G+K  ++ A K F+   ++  L +        S 
Sbjct: 35  GTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYASKAFSCLAIYQVLKEEDIACDVVSG 94

Query: 61  YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDK--AQKLH 115
            E+    +      E   +       E+   L N   TI+ +   +++  ++    +   
Sbjct: 95  GELFTALKGGMEPAEIEFHGNNKTPEELRYALDNKIGTIVIDNFYEIDLLEELLTTRNQT 154

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           +K+  R++P V           +  S+ G         E     + +   +V G+  H  
Sbjct: 155 QKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASGQATEALVRLLSNPSFDVQGVHCHIG 214

Query: 167 CENKSFLCFSAMLKNIEKEFGHFI----TQIEWISLGGGIHFTDKDYPVK----DFCQRL 218
            +  +   F A ++ +      +          +++GGG                F +++
Sbjct: 215 SQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLNMGGGFGVQYTQQDEPLAPATFVEKI 274

Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
               + +         ++++EPG +++    T   TV    E    ++ V VD  +  ++
Sbjct: 275 VYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIYTVGAQKEVPGVRHFVSVDGGMGDNI 334

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L         A    +       V G+ C +GD+         VK GD ++      
Sbjct: 335 RPALYQAVYDGFLANREGHDSVKKVTVVGKYCESGDVLLRDILLPEVKAGDLLAISSTGA 394

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
           Y  +  + +N    P +            R  +Y D 
Sbjct: 395 YGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYEDM 431


>gi|83721058|ref|YP_443535.1| diaminopimelate decarboxylase [Burkholderia thailandensis E264]
 gi|167620699|ref|ZP_02389330.1| diaminopimelate decarboxylase [Burkholderia thailandensis Bt4]
 gi|257137679|ref|ZP_05585941.1| diaminopimelate decarboxylase [Burkholderia thailandensis E264]
 gi|83654883|gb|ABC38946.1| diaminopimelate decarboxylase [Burkholderia thailandensis E264]
          Length = 423

 Score =  225 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 58/389 (14%), Positives = 121/389 (31%), Gaps = 27/389 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++  +  L    +            + +A+K  +  G+ +   +   G    S  E
Sbjct: 28  GTPLFVYSRAALTAAYEAYAKACAGRRASIHVAVKANSNLGVLNVFARLGAGFDIVSGGE 87

Query: 63  VMLGHEKFG-GETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G  +   ++   K  D    A+ +        ++ +L++    A  L     
Sbjct: 88  LARVLAAGGRAQNVVFSGVGKSADEMRIALEAGVKCFNVESIPELDRLNAVAASLGKRAP 147

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D   +           V G+  H   +  
Sbjct: 148 VSLRVNPDVDPKTHPYISTGLKANKFGIAFDDARATYRAAAALPNLEVVGIDCHIGSQIT 207

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               +   +    ++ ++      +I  + +GGG+  T  D    D    ++   E+   
Sbjct: 208 ELSPYLDAIDKLLDLVEQIEADGVKIHHVDVGGGLGITYDDETPPDIGAYVRAVLERIDA 267

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                 +I+ EPG ++  N   L T V  + +   KN  IVD+++       +     A 
Sbjct: 268 RGHGHREIWFEPGRSLTGNAGILLTRVEFLKQGEEKNFAIVDAAMNDLARPAMYQAFHAI 327

Query: 281 ----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                  +       V G  C +GD  G       +  GD ++      Y     + +N 
Sbjct: 328 EPVTPRTDVAAAVYDVVGPVCESGDWLGRDRSLA-IAPGDLLAIRSAGAYGFTMSSNYNA 386

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYNN 365
                  + +           +    +  
Sbjct: 387 RPRAAEVIVDGASAYLVRPRETVESLFER 415


>gi|227518697|ref|ZP_03948746.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0104]
 gi|227553306|ref|ZP_03983355.1| diaminopimelate decarboxylase [Enterococcus faecalis HH22]
 gi|227073877|gb|EEI11840.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0104]
 gi|227177561|gb|EEI58533.1| diaminopimelate decarboxylase [Enterococcus faecalis HH22]
 gi|315575921|gb|EFU88112.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0309B]
 gi|315580574|gb|EFU92765.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0309A]
          Length = 436

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 60/397 (15%), Positives = 129/397 (32%), Gaps = 37/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP ++ D   +              G+K  ++ A K F+   ++  L +        S 
Sbjct: 35  GTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYASKAFSCLAIYQVLKEEDIACDVVSG 94

Query: 61  YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDK--AQKLH 115
            E+    +      E   +       E+   L N   TI+ +   +++  ++    +   
Sbjct: 95  GELFTALKGGMEPAEIEFHGNNKTPEELRYALDNKIGTIVIDNFYEIDLLEELLATRNQT 154

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           +K+  R++P V           +  S+ G         E     + +   +V G+  H  
Sbjct: 155 QKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASGQATEALVRLLSNPSFDVQGVHCHIG 214

Query: 167 CENKSFLCFSAMLKNIEKEFGHFI----TQIEWISLGGGIHFTDKDYPVK----DFCQRL 218
            +  +   F A ++ +      +          +++GGG                F +++
Sbjct: 215 SQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLNMGGGFGVQYTQQDEPLAPATFVEKI 274

Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
               + +         ++++EPG +++    T   TV    E    ++ V VD  +  ++
Sbjct: 275 VYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIYTVGAQKEVPGVRHFVSVDGGMGDNI 334

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L         A    +       V G+ C +GD+         VK GD ++      
Sbjct: 335 RPALYQAVYDGFLANRDGHDSVKEVTVVGKYCESGDVLLRDILLPEVKAGDLLAISSTGA 394

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
           Y  +  + +N    P +            R  +Y D 
Sbjct: 395 YGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYEDM 431


>gi|29376071|ref|NP_815225.1| diaminopimelate decarboxylase [Enterococcus faecalis V583]
 gi|29343533|gb|AAO81295.1| diaminopimelate decarboxylase [Enterococcus faecalis V583]
          Length = 430

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 60/397 (15%), Positives = 129/397 (32%), Gaps = 37/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP ++ D   +              G+K  ++ A K F+   ++  L +        S 
Sbjct: 29  GTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYASKAFSCLAIYQVLKEEDIACDVVSG 88

Query: 61  YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDK--AQKLH 115
            E+    +      E   +       E+   L N   TI+ +   +++  ++    +   
Sbjct: 89  GELFTALKGGMEPAEIEFHGNNKTPEELRYALDNKIGTIVIDNFYEIDLLEELLATRNQT 148

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           +K+  R++P V           +  S+ G         E     + +   +V G+  H  
Sbjct: 149 QKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASGQATEALVRLLSNPSFDVQGVHCHIG 208

Query: 167 CENKSFLCFSAMLKNIEKEFGHFI----TQIEWISLGGGIHFTDKDYPVK----DFCQRL 218
            +  +   F A ++ +      +          +++GGG                F +++
Sbjct: 209 SQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLNMGGGFGVQYTQQDEPLAPATFVEKI 268

Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
               + +         ++++EPG +++    T   TV    E    ++ V VD  +  ++
Sbjct: 269 VYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIYTVGAQKEVPGVRHFVSVDGGMGDNI 328

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L         A    +       V G+ C +GD+         VK GD ++      
Sbjct: 329 RPALYQAVYDGFLANRDGHDSVKEVTVVGKYCESGDVLLRDILLPEVKAGDLLAISSTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
           Y  +  + +N    P +            R  +Y D 
Sbjct: 389 YGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYEDM 425


>gi|297172094|gb|ADI23076.1| diaminopimelate decarboxylase [uncultured gamma proteobacterium
           HF0770_07M15]
          Length = 432

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 65/396 (16%), Positives = 117/396 (29%), Gaps = 36/396 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+   + L ++              +  A+K  +  G+  TL     G  + S  E
Sbjct: 26  GTPLYVYSSKTLTDHFTKLSNALAPLDHLICFAMKSNSNLGVLRTLADLGSGFDTVSGGE 85

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +          +   +    K  +  A             + ++L +    A KL K   
Sbjct: 86  IQRAIAAGGNPKKCVFAGVGKTADEIAFALRKGIYCFNVESEAELERINRIAGKLKKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I +R+NP+V              ++ G   +                + G+  H   +  
Sbjct: 146 IAIRVNPNVDAKTHKKITTGTYENKFGIAIEKIPALYARGAKLKHIRLRGVQMHIGSQLT 205

Query: 171 SFLCFSAMLKNIEKEFGH--FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEF------- 221
               F+  ++ I            IE+IS+GGG+    +D  V       K         
Sbjct: 206 QVKPFADAVRKIAPLAAKLKAKHGIEFISIGGGLGIMYEDALVSGNADWWKRKEAKNILT 265

Query: 222 -----------SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHV 269
                       +   +++ LEPG  I  N   L T V  +     K   IVD+++   +
Sbjct: 266 PAKYAATLVPLLQPLGLKVLLEPGRFISGNAGILVTRVEYVKRTGKKYFAIVDAAMNDLL 325

Query: 270 PDYLLYQESATIYPNTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
                      +        P    V G  C  GD F +      V  GD ++      Y
Sbjct: 326 RPAFYESYHEIVPVKQSKARPVNTDVVGGICETGDTFCKDRPIPRVAEGDLVAILSAGAY 385

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
                  +N   +P   +     +    +     + 
Sbjct: 386 GFVMAGTYNTRPLPAEVLVKGKKSAIVRKRQKVKEI 421


>gi|120435107|ref|YP_860793.1| diaminopimelate decarboxylase [Gramella forsetii KT0803]
 gi|117577257|emb|CAL65726.1| diaminopimelate decarboxylase [Gramella forsetii KT0803]
          Length = 411

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 72/383 (18%), Positives = 129/383 (33%), Gaps = 26/383 (6%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           +P Y+ D  K+++         K   +++  A+K  +   +   L     G  + S+ EV
Sbjct: 15  SPVYVYDADKIISQYQRLTDAFKVNELRIHYAVKALSNISILKLLGSLGCGLDTVSVQEV 74

Query: 64  MLGH-EKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            LG           Y        EI+ V+     I  + +S L +F  K       + +R
Sbjct: 75  RLGLKAGVDPSKIIYTPNGVSLEEIEEVVQLGVQINIDNLSVLEQFGTK--HPKIPVCIR 132

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKSFLCF 175
           INP V              S+ G            +E+   ++NG+  H   +      F
Sbjct: 133 INPHVMAGGNSKISVGHIDSKFGISIHQMPHLLRIVENTEMHINGIHMHTGSDILDIGVF 192

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL--------KEFSEKYSV 227
               + I  E      ++E+I  G G     ++  ++   + L        K+F ++Y  
Sbjct: 193 LYASE-ILFEAAKNFKELEFIDFGSGFKVPYREGDIETDIEDLGVQLTQKFKKFCKEYGR 251

Query: 228 QIYL--EPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQES---ATI 281
           ++ L  EPG+ +V+ +      V  I +        +DS     +               
Sbjct: 252 ELALAFEPGKFLVSESGKFLAKVNVIKQTTSTVFAGIDSGFNHLIRPMFYGSHHDITNIS 311

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
            PN  P    V G  C   D FG       ++ GD +SF +   Y  +  + FN    P 
Sbjct: 312 NPNAKPRFYSVVGYICET-DTFGNNRRISEIREGDILSFSNAGAYCFSMASNFNSRYRPP 370

Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364
             +             ++ D   
Sbjct: 371 EVMWYNGKAHLIRERETFEDLTR 393


>gi|121997989|ref|YP_001002776.1| diaminopimelate decarboxylase [Halorhodospira halophila SL1]
 gi|121589394|gb|ABM61974.1| diaminopimelate decarboxylase [Halorhodospira halophila SL1]
          Length = 418

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 58/382 (15%), Positives = 110/382 (28%), Gaps = 24/382 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +             AG  +  A+K      +   L ++  G    S  E
Sbjct: 29  GTPCYVYSRAAIEERWALYRSALGVAG-DVCYAVKANGNLALLQLLARHGAGFDIVSGGE 87

Query: 63  VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +              ++   K  D    A+ +        + ++L +    A  +     
Sbjct: 88  LERVLHAGGDAARVVFSGVGKGTDEIRRALQAGIRCFNVESAAELERIASVAATENTPAP 147

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENK 170
           + LR+NP V+             S+ G   +                V G+  H   +  
Sbjct: 148 VALRVNPDVNPETHPYIATGLAQSKFGIALEEAEALYLQAANDPRLEVRGIACHIGSQLL 207

Query: 171 SFLC---FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE---FSEK 224
           S       +  L  + +        ++ I  GGG+     D       + ++        
Sbjct: 208 SVAPLTEAAERLAALARRLQEQGISLDHIDAGGGLGVHYIDEQPPTPAEHIEAISAPLRD 267

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESATIYP 283
             V + +EPG AIV     L T +  +  N  K   IVD+ +  ++   L          
Sbjct: 268 LGVSVLVEPGRAIVAEAGILLTRIEYLKHNGGKEFAIVDAGMNDYLRPALYDAAHTLEAV 327

Query: 284 NTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                      V G  C + D F           G  ++      Y     + +N    P
Sbjct: 328 TPSEAELRPVDVVGPVCESADTFARDCTLP-AAAGGLLAIRSAGAYGAVMASQYNARPRP 386

Query: 341 TIAVKNVDGTIKAIREFSYNDY 362
              + +        R  + ++ 
Sbjct: 387 PEVLVDGTQAHLIRRRETIDEL 408


>gi|307299389|ref|ZP_07579190.1| diaminopimelate decarboxylase [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306915185|gb|EFN45571.1| diaminopimelate decarboxylase [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 375

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 64/367 (17%), Positives = 123/367 (33%), Gaps = 10/367 (2%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D +K+   +  A  + +    +++ ALK      +   + +   G    S  E
Sbjct: 12  GTPLYVYDAEKIRKRIKKAKTVFEGLDAEIVFALKANNNPALLKIMAEEEIGADVVSRGE 71

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
           + L  +  G +   +N   K  E      N    I    S           ++    LR+
Sbjct: 72  L-LASKMAGMKRILWNGNGKTHEDITHFVNQGLNIVCIDSLQEL--PLWDGVNVIKLLRV 128

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           NP V               + G    +K+      ++G+  H   +      F       
Sbjct: 129 NPDVDARTHPHISTGLRAHKFGVPI-EKVSEVADRIDGIHLHIGSQITDVEPFFDAYSKA 187

Query: 183 EKEFGHFITQIEWISLGGGIHFTDK--DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
                 +    ++I LGGG     +  +  ++   + +      +  ++  E G  I+  
Sbjct: 188 LDCAKQYG--FKYIDLGGGWGIDYEGKELDIERLQKGISGIFAGFDGKLIAELGRFIIGP 245

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES--ATIYPNTGPYTAMVCGRSCL 298
              L T V+ +  + K  ++ D+ + A +   L         +       TA V G  C 
Sbjct: 246 AGYLVTKVVSVKPSEKIFIVTDAGMNALIRPVLYDAHHRIQVLASTKKTVTADVVGPLCE 305

Query: 299 AGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFS 358
           +GDI       +    G  I  E+   Y  +  N +NG+  P   + + +      R  S
Sbjct: 306 SGDILARGRKLEVPIPGTAIVLENAGAYGFSMANNYNGMPFPAEVLVDGEEVKLIRRRQS 365

Query: 359 YNDYYNN 365
             + + N
Sbjct: 366 IEELFTN 372


>gi|256961983|ref|ZP_05566154.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis Merz96]
 gi|293382282|ref|ZP_06628221.1| diaminopimelate decarboxylase [Enterococcus faecalis R712]
 gi|293389458|ref|ZP_06633915.1| diaminopimelate decarboxylase [Enterococcus faecalis S613]
 gi|307289045|ref|ZP_07569001.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0109]
 gi|312907476|ref|ZP_07766467.1| diaminopimelate decarboxylase [Enterococcus faecalis DAPTO 512]
 gi|312910094|ref|ZP_07768941.1| diaminopimelate decarboxylase [Enterococcus faecalis DAPTO 516]
 gi|256952479|gb|EEU69111.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis Merz96]
 gi|291080227|gb|EFE17591.1| diaminopimelate decarboxylase [Enterococcus faecalis R712]
 gi|291081075|gb|EFE18038.1| diaminopimelate decarboxylase [Enterococcus faecalis S613]
 gi|306499754|gb|EFM69115.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0109]
 gi|310626504|gb|EFQ09787.1| diaminopimelate decarboxylase [Enterococcus faecalis DAPTO 512]
 gi|311289367|gb|EFQ67923.1| diaminopimelate decarboxylase [Enterococcus faecalis DAPTO 516]
 gi|315163956|gb|EFU07973.1| diaminopimelate decarboxylase [Enterococcus faecalis TX1302]
          Length = 436

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 60/397 (15%), Positives = 129/397 (32%), Gaps = 37/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP ++ D   +              G+K  ++ A K F+   ++  L +        S 
Sbjct: 35  GTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYASKAFSCLAIYQVLKEEDIACDVVSG 94

Query: 61  YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDK--AQKLH 115
            E+    +      E   +       E+   L N   TI+ +   +++  ++    +   
Sbjct: 95  GELFTALKGGMEPAEIEFHGNNKTPEELRYALDNKIGTIVIDNFYEIDLLEELLATRNQT 154

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           +K+  R++P V           +  S+ G         E     + +   +V G+  H  
Sbjct: 155 QKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASGQATEALVRLLSNPSFDVQGVHCHIG 214

Query: 167 CENKSFLCFSAMLKNIEKEFGHFI----TQIEWISLGGGIHFTDKDYPVK----DFCQRL 218
            +  +   F A ++ +      +          +++GGG                F +++
Sbjct: 215 SQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLNMGGGFGVQYTQQDEPLAPATFVEKI 274

Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
               + +         ++++EPG +++    T   TV    E    ++ V VD  +  ++
Sbjct: 275 VYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIYTVGAQKEVPGVRHFVSVDGGMGDNI 334

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L         A    +       V G+ C +GD+         VK GD ++      
Sbjct: 335 RPALYQAVYDGFLANRDGHDSVKKVTVVGKYCESGDVLLRDILLPEVKAGDLLAISSTGA 394

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
           Y  +  + +N    P +            R  +Y D 
Sbjct: 395 YGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYEDM 431


>gi|256762439|ref|ZP_05503019.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis T3]
 gi|256683690|gb|EEU23385.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis T3]
          Length = 436

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 60/397 (15%), Positives = 129/397 (32%), Gaps = 37/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP ++ D   +              G+K  ++ A K F+   ++  L +        S 
Sbjct: 35  GTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYASKAFSCLAIYQVLKEEDIACDVVSG 94

Query: 61  YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDK--AQKLH 115
            E+    +      E   +       E+   L N   TI+ +   +++  ++    +   
Sbjct: 95  GELFTALKGGMEPAEIEFHGNNKTPEELRYALDNKIGTIVIDNFYEIDLLEELLTTRNQT 154

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           +K+  R++P V           +  S+ G         E     + +   +V G+  H  
Sbjct: 155 QKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASGQATEALVRLLSNPSFDVQGVHCHIG 214

Query: 167 CENKSFLCFSAMLKNIEKEFGHFI----TQIEWISLGGGIHFTDKDYPVK----DFCQRL 218
            +  +   F A ++ +      +          +++GGG                F +++
Sbjct: 215 SQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLNMGGGFGVQYTQQDEPLAPATFVEKI 274

Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
               + +         ++++EPG +++    T   TV    E    ++ V VD  +  ++
Sbjct: 275 VYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIYTVGAQKEVPGVRHFVSVDGGMGDNI 334

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L         A    +       V G+ C +GD+         VK GD ++      
Sbjct: 335 RPALYQAVYDGFLANRDGHDSVKKVTVVGKYCESGDVLLRDILLPEVKAGDLLAISSTGA 394

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
           Y  +  + +N    P +            R  +Y D 
Sbjct: 395 YGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYEDM 431


>gi|257089826|ref|ZP_05584187.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis CH188]
 gi|312903248|ref|ZP_07762428.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0635]
 gi|256998638|gb|EEU85158.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis CH188]
 gi|310633124|gb|EFQ16407.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0635]
 gi|315577593|gb|EFU89784.1| diaminopimelate decarboxylase [Enterococcus faecalis TX0630]
          Length = 436

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 60/397 (15%), Positives = 128/397 (32%), Gaps = 37/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP ++ D   +              G+K  ++ A K F+   ++  L +        S 
Sbjct: 35  GTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYASKAFSCLAIYQVLKEEDIACDVVSG 94

Query: 61  YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDK--AQKLH 115
            E+    +      E   +       E+   L N   TI+ +   +++  ++    +   
Sbjct: 95  GELFTALKGGMEPAEIEFHGNNKTPEELRYALDNKIGTIVIDNFYEIDLLEELLATRNQT 154

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           +K+  R++P V           +  S+ G         E     + +   +V G+  H  
Sbjct: 155 QKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASGQATEALVRLLSNPSFDVQGVHCHIG 214

Query: 167 CENKSFLCFSAMLKNIEKEFGHFI----TQIEWISLGGGIHFTDKDYPVK----DFCQRL 218
            +  +   F A ++ +      +          +++GGG                F +++
Sbjct: 215 SQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLNMGGGFGVQYTQQDEPLAPATFVEKI 274

Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
               + +         ++++EPG +++    T   TV    E    ++ V VD  +  ++
Sbjct: 275 VYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIYTVGAQKEVPGVRHFVSVDGGMGDNI 334

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L         A            V G+ C +GD+         VK GD ++      
Sbjct: 335 RPALYQAVYDGFLANREGYDSVKKVTVVGKYCESGDVLLRDILLPEVKAGDLLAISSTGA 394

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
           Y  +  + +N    P +            R  +Y D 
Sbjct: 395 YGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYEDM 431


>gi|257086803|ref|ZP_05581164.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis D6]
 gi|256994833|gb|EEU82135.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis D6]
 gi|315027325|gb|EFT39257.1| diaminopimelate decarboxylase [Enterococcus faecalis TX2137]
          Length = 436

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 60/397 (15%), Positives = 128/397 (32%), Gaps = 37/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP ++ D   +              G+K  ++ A K F+   ++  L +        S 
Sbjct: 35  GTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYASKAFSCLAIYQVLKEEDIACDVVSG 94

Query: 61  YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDK--AQKLH 115
            E+    +      E   +       E+   L N   TI+ +   +++  ++    +   
Sbjct: 95  GELFTALKGGMEPAEIEFHGNNKTPEELRYALDNKIGTIVIDNFYEIDLLEELLATRNQT 154

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           +K+  R++P V           +  S+ G         E     + +   +V G+  H  
Sbjct: 155 QKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASGQATEALVRLLSNPSFDVQGVHCHIG 214

Query: 167 CENKSFLCFSAMLKNIEKEFGHFI----TQIEWISLGGGIHFTDKDYPVK----DFCQRL 218
            +  +   F A ++ +      +          +++GGG                F +++
Sbjct: 215 SQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLNMGGGFGVQYTQQDEPLAPATFVEKI 274

Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
               + +         ++++EPG +++    T   TV    E    ++ V VD  +  ++
Sbjct: 275 VYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIYTVGAQKEVPGVRHFVSVDGGMGDNI 334

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L         A            V G+ C +GD+         VK GD ++      
Sbjct: 335 RPALYQAVYDGFLANREGYDSVKKVTVVGKYCESGDVLLRDILLPEVKAGDLLAISSTGA 394

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
           Y  +  + +N    P +            R  +Y D 
Sbjct: 395 YGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYEDM 431


>gi|167564379|ref|ZP_02357295.1| diaminopimelate decarboxylase [Burkholderia oklahomensis EO147]
 gi|167571526|ref|ZP_02364400.1| diaminopimelate decarboxylase [Burkholderia oklahomensis C6786]
          Length = 423

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 59/391 (15%), Positives = 123/391 (31%), Gaps = 27/391 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++  +  L    D            + +A+K  +  G+ +   +   G    S  E
Sbjct: 28  GTPLFVYSRAALTAAYDAYAKACAGRRASVHVAVKANSNLGVLNVFARLGAGFDIVSGGE 87

Query: 63  VMLGHEKFG-GETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G  +   ++   K  D    A+ +        +  +L++    A  L     
Sbjct: 88  LARVLAAGGRAQNVVFSGVGKSADEMRAALEAGVKCFNVESTPELDRLNAVAASLGKRAP 147

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LR+NP V              ++ G    +   +          +V G+  H   +  
Sbjct: 148 VSLRVNPDVDPKTHPYISTGLKANKFGIAFDEARATYRAAAALPNLDVVGIDCHIGSQIT 207

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               +   +    ++ ++      +I  + +GGG+  T  D    D    ++   E+   
Sbjct: 208 ELSPYLDAIDKLLDLVEQIEADGVKIHHVDVGGGLGITYDDETPPDIGAYVRAVLERIDA 267

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                 +I+ EPG ++  N   L T V  + + + KN  IVD+++       +     A 
Sbjct: 268 RGHGHREIWFEPGRSLTGNAGILLTRVEFLKQGDEKNFAIVDAAMNDLARPAMYEAFHAI 327

Query: 281 ----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                  +       V G  C +GD  G       +  GD ++      Y     + +N 
Sbjct: 328 EPVKPRTDIATAVYDVVGPVCESGDWLGRERSLA-IAPGDLLAIRSAGAYGFTMSSNYNT 386

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367
                  + +           +    +   S
Sbjct: 387 RPRAAEVIVDGANAYLVRPRETVESLFERES 417


>gi|126650126|ref|ZP_01722359.1| diaminopimelate decarboxylase [Bacillus sp. B14905]
 gi|126593298|gb|EAZ87260.1| diaminopimelate decarboxylase [Bacillus sp. B14905]
          Length = 449

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 62/400 (15%), Positives = 124/400 (31%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP ++ D   +     + +   K  GVK  +  A K FA   ++    +        S 
Sbjct: 40  GTPLFVYDTALIRKRARSFIDTFKKLGVKAEVAYASKAFACVAVYQLAAEENLSLDVVSG 99

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E   ++   K          S    I+ +   ++   K+ +++  +K
Sbjct: 100 GELFTAIKAGFPAERIHFHGNNKSISELELAFDSKIGCIVVDNFYEIQLLKEISERRQQK 159

Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEK-----CKDKIESEIKN----VNGLMFHNN 166
           +   LR+ P V           +  S+ G         +  +    +    + GL  H  
Sbjct: 160 MRILLRVTPGVEAHTHDFITTGQADSKFGFDLNNGQADEAFQQTFNHEFLELLGLHCHIG 219

Query: 167 CENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD-----------KDYPV 211
            +      F      ++  I             ++LGGG                    +
Sbjct: 220 SQIFDTAGFGLAGEKLIDKISDWNKAHGFTCTVLNLGGGFGIRYTEEDAPLEPQVYVEDM 279

Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHV 269
               +           +I++EPG ++V +      T+       +++  + VD  +  ++
Sbjct: 280 ITVVKNKATVLGLKMPEIWIEPGRSLVGDAGISLYTIGSQKTVPDVRKYIAVDGGMSDNI 339

Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   I  +           V G+ C +GD        +    GD ++      
Sbjct: 340 RPALYDAKYEAIIASKANEPKNEIYTVAGKLCESGDKLIIDAKLQDAASGDILAIFCTGA 399

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  + +N +  P +          AIR  SY D   N
Sbjct: 400 YGYSMASNYNRVPRPAVVFVENGQHQLAIRRESYEDIVQN 439


>gi|254472266|ref|ZP_05085666.1| diaminopimelate decarboxylase [Pseudovibrio sp. JE062]
 gi|211958549|gb|EEA93749.1| diaminopimelate decarboxylase [Pseudovibrio sp. JE062]
          Length = 423

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 62/388 (15%), Positives = 117/388 (30%), Gaps = 25/388 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y   +     +                 A+K  +   +   L +   G    S  
Sbjct: 25  VGTPFYCYSRATFERHFKVFDGAFDGIDHLTCYAMKANSNIAILTVLAKLGAGADVVSEG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HK 116
           E+              ++   K  +      N         +  +L +  + A ++    
Sbjct: 85  ELRRALKAGIPANKIVFSGVGKTRQEMRFALNAGILCFNVESEPELKRLSEVASEMGKTA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCEN 169
            I LRINP V              ++ G           +  +     V G+  H   + 
Sbjct: 145 PISLRINPDVDAKTHAKISTGLAANKFGIAWDRARAVYNEAAQLPGLKVTGMDMHIGSQI 204

Query: 170 K---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFS 222
                F      L  +         +IE + +GGG+        +     ++ + +++  
Sbjct: 205 TELGPFDDALERLGVLIGMLKEDGIEIEHLDVGGGLGIPYGGGIEAPLPTEYAKIVRKHI 264

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATI 281
           E+  V +  EPG  I  N   L T  +   E   KN VIVD+++   +   L        
Sbjct: 265 ERLGVTLITEPGRLIAGNAGILVTETIYRKEGEPKNFVIVDAAMNDLIRPTLYEAHHDIG 324

Query: 282 YPNTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
             +          A V G  C  GD           + GD ++      Y   +   +N 
Sbjct: 325 AVSEERQNGEQMLADVVGPVCETGDYIARDRELPKFEEGDLLAVYSCGAYGATQSGTYNT 384

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +    + + D      +  SY++  N
Sbjct: 385 RLLVPEVLVDGDKFAIIRQRPSYDELLN 412


>gi|187776745|ref|ZP_02993218.1| hypothetical protein CLOSPO_00260 [Clostridium sporogenes ATCC
           15579]
 gi|187775404|gb|EDU39206.1| hypothetical protein CLOSPO_00260 [Clostridium sporogenes ATCC
           15579]
          Length = 428

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 71/398 (17%), Positives = 124/398 (31%), Gaps = 35/398 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+  + +N    +        K+  A K F    M + + +        S  E
Sbjct: 29  GTPLYVMDETLIRDNCRRYVTSFNKEKNKVAYAGKAFLTKAMCNLIKEEGLYLDVVSGGE 88

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSN--CDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +       F  E   ++   K  E   +  N    T + +   +L+   +  +  + K  
Sbjct: 89  IFTAYKSGFPMEKVYFHGNNKTIEEIEMAINLGVGTFVADNFQELDIIDNACKNKNIKQR 148

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168
             LRI P +           +  S+ G    D           E E     G   H   +
Sbjct: 149 VILRIIPGIEAHTHEYIKTGQIDSKFGFTLIDNGAIKAVKKAYELENIQFVGFHCHIGSQ 208

Query: 169 NK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                        MLK I++        IE + LGGG     KD       +   +    
Sbjct: 209 IFETKPYEEEIEIMLKLIKRTNKELNIDIEELDLGGGFGIYYKDGDKPKEIEEFCKIILD 268

Query: 225 YSVQI-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271
                            +EPG +IV N+     +V  I E       V  +  +  ++  
Sbjct: 269 KVKNYSKEIGVREPVLIIEPGRSIVGNSGVTLYSVGSIKEIPNVAKYVAVNGGMTDNIRP 328

Query: 272 YLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
            L   E   +  N           + G+ C +GD+         V+  D  +  +   Y 
Sbjct: 329 ALYKSEYECVVCNKALDNLLEEVKIVGKCCESGDVLINNVKLPIVETNDLFAILNTGAYG 388

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            +  + +N   +P++   N D      R  SY +   N
Sbjct: 389 YSMASNYNKALLPSVVFVNNDKVKLVCRRQSYENLIQN 426


>gi|297584485|ref|YP_003700265.1| diaminopimelate decarboxylase [Bacillus selenitireducens MLS10]
 gi|297142942|gb|ADH99699.1| diaminopimelate decarboxylase [Bacillus selenitireducens MLS10]
          Length = 444

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 67/402 (16%), Positives = 128/402 (31%), Gaps = 37/402 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D + + +  +      + A V+  +  A K F+   MF   ++        S 
Sbjct: 30  GTPLYVYDVKDIRDRAEAFKSAFERASVQYQVAYASKAFSCVAMFQLADELGLSLDVCSG 89

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDK--AQKLH 115
            E+    E  F  +   ++   K  +   +  N     I+ +  ++L        A++L 
Sbjct: 90  GELYTALEADFPVDRIHFHGNNKTADELEMAVNERIGCIVVDNFTELTWLMAITEAKELP 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
             + +RI P V           +  S+ G               +  +  ++ G+  H  
Sbjct: 150 MDVLIRITPGVEAHTHEYISTGQEDSKFGFDLNSGQATKAIDMIMNHDHLHLLGVHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK---------- 212
            +      F   +K I K    +      + E +++GGG      ++             
Sbjct: 210 SQIFKTEGFEHAVKEIYKSLEKWKDDLGYEPEVLNVGGGFGIRYSEHDEPLPIGDYIDKT 269

Query: 213 -DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269
               +   +       +I++EPG A+V    T   T+    E         VD  +  ++
Sbjct: 270 VQAARSEADKRGMNVPEIWIEPGRAMVGEAGTTLYTIGSRKEIPTLRTYLSVDGGMTDNI 329

Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   E   +  N G         V GR C +GD+            GD ++      
Sbjct: 330 RPALYQAEYEAVVANKGHAPEEELVSVAGRCCESGDMLIWDLKIPETAPGDLLAVSSTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367
           Y     + +N +  P +           I   +Y D     S
Sbjct: 390 YGYAMASNYNRMLRPAVVFVEDGEYECVIERENYADLVRKES 431


>gi|121602458|ref|YP_988394.1| diaminopimelate decarboxylase [Bartonella bacilliformis KC583]
 gi|120614635|gb|ABM45236.1| diaminopimelate decarboxylase [Bartonella bacilliformis KC583]
          Length = 424

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 64/387 (16%), Positives = 112/387 (28%), Gaps = 26/387 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L+ +         +    +  A+K  +   +   L     G    S  
Sbjct: 25  VGTPFYCYSSGALVAHFKEYQEAFHDMPSLIAYAVKANSNQAVLRILAAKGAGADVVSEG 84

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118
           E+          +   Y+   K         + D       +  +L +   +A  L K  
Sbjct: 85  ELRRALAVGITPQRIVYSGVGKTVREIDFALSQDIFCFNVESEPELEQLSARAVALSKTA 144

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCEN 169
              LRINP V           R  ++ G          K   +     V G+  H   + 
Sbjct: 145 RISLRINPDVDAKTHKKITTGRFDNKFGIPLSLACSAYKKAAQLPGLQVRGMDMHIGSQI 204

Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVK-----DFCQRLKEF 221
                F            H       I  I +GGG+  +            D+   +++ 
Sbjct: 205 CDLKPFEDAFLIAADFVRHLWREGYAITHIDIGGGLGISYHPEQNMVPSPADYAALVRKH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                + I LEPG +I  +   L T+V+ +     +N V+VD ++   +   L       
Sbjct: 265 IAPLGINIILEPGRSIAGHAGVLVTSVIYLKRGEGRNFVVVDGAMNDFLRPTLYDAWQTV 324

Query: 281 IYPNTGPYTAM-----VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +     P  A      + G  C  GD  G       V  GD ++      Y     + +N
Sbjct: 325 VPVKKAPEDAPLIMADIVGPVCETGDYLGLNRSLPMVAAGDLLAITGAGAYGAVMASTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDY 362
              +    +              Y   
Sbjct: 385 SRLLVPEILVQNTRYDVIRPRLDYEQL 411


>gi|163786031|ref|ZP_02180479.1| diaminopimelate decarboxylase [Flavobacteriales bacterium ALC-1]
 gi|159877891|gb|EDP71947.1| diaminopimelate decarboxylase [Flavobacteriales bacterium ALC-1]
          Length = 401

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 70/386 (18%), Positives = 122/386 (31%), Gaps = 27/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            +P Y+ D + +                +K+  A+K  +   +    N    G  + S+ 
Sbjct: 14  GSPVYVYDAEIITAQYKRLTKAFDKVKQLKINYAVKALSNISILKLFNTLGSGIDTVSIQ 73

Query: 62  EVMLGH-EKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           EV LG    F  E   +        EI+ V      I  + +S L +F  K       + 
Sbjct: 74  EVQLGLKAGFKAEDIIFTPNGVSLEEIEEVSKLGVQINIDNLSVLEQFGTK--HPTIPVC 131

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173
           +RINP V              S+ G            +E+    +NG+  H   +     
Sbjct: 132 IRINPHVMAGGNTNISVGHIDSKFGISIHQIPLLLRIVENTNMTINGIHMHTGSDILDID 191

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY--- 230
            F    + I  E       +++I  G G     K   ++   + L E   K   +     
Sbjct: 192 VFLYASE-ILFETAKNFKNLDFIDFGSGFKVPYKVDDIETNIEELGEKLSKRFNEFCKDY 250

Query: 231 -------LEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLY--QESAT 280
                   EPG+ +V+        V  + +        VDS     +   L     E   
Sbjct: 251 GKELTLAFEPGKFLVSEAGVFLVKVNVVKQTTSTVFAQVDSGFNHLIRPMLYGSQHEILN 310

Query: 281 IYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
           I    G      V G  C   D F        +  GD + F++   Y  +  + +N    
Sbjct: 311 ISNPKGRERFYSVVGYICET-DTFANNRRISEINQGDILCFKNAGAYCYSMASNYNSRYR 369

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365
           P   + + D      +  +++D  +N
Sbjct: 370 PAEVLIHKDKAHLIRKRETFDDIISN 395


>gi|296188475|ref|ZP_06856863.1| diaminopimelate decarboxylase [Clostridium carboxidivorans P7]
 gi|296046739|gb|EFG86185.1| diaminopimelate decarboxylase [Clostridium carboxidivorans P7]
          Length = 433

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 68/400 (17%), Positives = 129/400 (32%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++D+  + +         +  G++  ++ A K F    +   + +        S 
Sbjct: 30  GTPLYVVDEDLVRSTCREFKDNFEIEGIESEVIYASKAFLNLAIAKVICEEGLSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHK- 116
            E+       F       +   K       A+ +    I+ +  ++L   +   + L+K 
Sbjct: 90  GELYTALKANFPVSRIYMHGNNKTEGELSMAIEAGIGRIVVDNRNELEVIEYLCKSLNKK 149

Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
             + LR+NP +          ++  S+ GE   D            SE  N  G   H  
Sbjct: 150 VDVLLRVNPGIEAHTHEYIQTSKNDSKFGESIFDEDMCKIINRFQNSESVNFKGFHCHIG 209

Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF-CQRLKEF 221
            +       +   S M+K +EK         E ++LGGG      +          LK  
Sbjct: 210 SQIFEEKSFYSEVSDMIKFLEKIKNQCGFSTEELNLGGGFGVYYSEGDKPVNLKSCLKNM 269

Query: 222 SEK----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI------VDSSV 265
                           ++ +EPG +I+ N  T    V    +             +  + 
Sbjct: 270 LSILKEESQKSGLNIKKVMIEPGRSIIANAGTTLYNVGGTKKTYGGKQYIFIDGGMADNP 329

Query: 266 EAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              + D       A    +       + G+ C +GDI  +      V+ GD ++      
Sbjct: 330 RTALYDAKYEAVVANKVNSENSEIYTIAGKCCESGDIIIKEIELPEVERGDIMAVLTTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           YN +  + +N I  P +          A++  +Y D   N
Sbjct: 390 YNYSMSSNYNRIPKPAVVFVKEGEAKIAVKRETYEDIIRN 429


>gi|310780443|ref|YP_003968775.1| diaminopimelate decarboxylase [Ilyobacter polytropus DSM 2926]
 gi|309749766|gb|ADO84427.1| diaminopimelate decarboxylase [Ilyobacter polytropus DSM 2926]
          Length = 433

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 79/400 (19%), Positives = 144/400 (36%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P Y++D+  +  N++T     K      +++ A K F   GM   ++++       S 
Sbjct: 29  GSPLYVMDEALISKNMETFKAAFKSDRFQTEVVYASKAFLTTGMCQIVDRHGLSMDVVSG 88

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+       F  E    +   K  E   +        II +   +L+K +   ++    
Sbjct: 89  GELFTVKSAGFPMEKVHMHGNNKTWEELEMCLDYGIGEIIVDNRDELDKLERVCREKGKK 148

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
             + LR+NP +          +   S+ GE   D          I +E   + G   H  
Sbjct: 149 INVLLRVNPGIEAHTHEYIQTSTYSSKFGESIFDENIKDIIKKFIAAEHVELKGFHCHIG 208

Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP--------VKDF 214
            +       F     MLK I++           ++LGGG      D           K+ 
Sbjct: 209 SQIFDEKPFFAAMDTMLKFIKQMKDEAGLDTTVLNLGGGFGVYYFDGDDAVDFEKFCKEM 268

Query: 215 CQRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHV 269
            + L+   ++Y +    + +EPG +IV N  T   TV    ++ + K  V VD  +  ++
Sbjct: 269 IKDLESKLDEYEIDLDKVIIEPGRSIVANAGTTLYTVGGTKVTYSGKKYVFVDGGMTDNI 328

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   E   +              V G+ C +GD+     + +  K GD ++      
Sbjct: 329 RPALYQAEYEGVIANRINEKTEDLVTVAGKCCESGDLLLRDVYLQEAKEGDILAISTTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           YN +  + +N I  P +       +  A++  SY D   N
Sbjct: 389 YNYSMASNYNRIRKPAVVFVKDGESKVAVKRESYEDLIRN 428


>gi|160901955|ref|YP_001567536.1| diaminopimelate decarboxylase [Petrotoga mobilis SJ95]
 gi|160359599|gb|ABX31213.1| diaminopimelate decarboxylase [Petrotoga mobilis SJ95]
          Length = 430

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 69/399 (17%), Positives = 127/399 (31%), Gaps = 36/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK---NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP  ++D+ ++  N+       +       ++  A K F    +   L          S
Sbjct: 24  GTPLLVLDEAQIRENIKRLKSAFESADYTNYEIAYASKAFLNTELCRILQSENVSLDVVS 83

Query: 60  LYEVMLG-HEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
             E+ +  H  F      +N      +  + A+ ++   II +   +    +  +++L K
Sbjct: 84  GGELYIAFHSSFPANKIFFNGNSKTNEELVMALENDVGHIIVDNEDEFRNIERISKRLRK 143

Query: 117 K--IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNC 167
           K  I  R+ P+++          +  S+ G    D          SE   + G+  H   
Sbjct: 144 KAKIYFRVIPNITPDTHKYISTGQKDSKFGMSFDDMLKLIKSIKNSENLEIKGIHAHIGS 203

Query: 168 ENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR------ 217
           +      +          + K        +  I +GGG       +      Q       
Sbjct: 204 QINEAEPYVELVKTFFDLLNKIREETGAVLPEIDIGGGFGVAHSTFEKAIDIQEAIKGVI 263

Query: 218 -----LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPD 271
                L       S +I +EPG  I+++  T   TV  I        +V D  +  ++  
Sbjct: 264 QEVRFLSSKFHYPSPKIIVEPGRYIISSAGTTLYTVGTIKRTENKKYVVVDGGMADNIRP 323

Query: 272 YLLYQESATIYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
            L   +      N            + GR+C +GDI  E      +K GD ++      Y
Sbjct: 324 ALYGAKYEVFIANRPKDTINLEKVTIAGRACESGDILIEETCLPEIKPGDLLAIPSTGDY 383

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
             +  N +NG   P I +          R   Y+D    
Sbjct: 384 TNSMSNNYNGFLKPAIVLVKNGKHKLITRREVYDDLIKR 422


>gi|319404864|emb|CBI78465.1| Diaminopimelate decarboxylase [Bartonella rochalimae ATCC BAA-1498]
          Length = 424

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 64/388 (16%), Positives = 119/388 (30%), Gaps = 26/388 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y    + L+ N +      ++    +  A+K  +   +   L +   G    S  
Sbjct: 25  VGTPFYCYSARTLITNFENYQQAFQDMPYLIAYAVKANSNQAILRLLARSGAGADVVSEG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+              Y+   K  +    A+  N       +  +L +   +A  L    
Sbjct: 85  ELRRALAAGIPAHRIVYSGVGKTMKEIDFALTQNIHCFNVESEPELEQLSARAVALSTTA 144

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
              LRINP V           +  ++ G       E   K        + G+  H   + 
Sbjct: 145 RISLRINPDVDAKTHKKITTGKSENKFGIPLSSAREVYKKAAQLPGLYICGVDIHIGSQI 204

Query: 170 ---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV-----KDFCQRLKEF 221
              K F     +  +   +  +    I  + +GGG+               ++   +++ 
Sbjct: 205 CNLKPFEDAFLITADFICQLWNDGYTITHVDIGGGLGIPYGSEHHSVPSPFEYAALVRKH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                + I LEPG +IV     L T+V+ +     +N VIVD+++   +   L       
Sbjct: 265 IAPLGINIILEPGRSIVGEAGILVTSVIHLKRGKERNFVIVDAAMNDFIRPTLYEAWQNV 324

Query: 281 IYPNTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +     P       A + G  C  GD  G       +  GD +       Y     N +N
Sbjct: 325 LLVKEKPIDTPLINADIVGPVCETGDYLGLNRSLALLSQGDLLVVTGAGAYGAVMSNTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY 363
              +    +              Y    
Sbjct: 385 SRLLIPEVLVQDMRYAVIRPRLDYEQLI 412


>gi|312876367|ref|ZP_07736352.1| diaminopimelate decarboxylase [Caldicellulosiruptor lactoaceticus
           6A]
 gi|311796861|gb|EFR13205.1| diaminopimelate decarboxylase [Caldicellulosiruptor lactoaceticus
           6A]
          Length = 433

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 60/402 (14%), Positives = 124/402 (30%), Gaps = 37/402 (9%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKN---AGVKLLLALKCFAAWGMFDTLNQYMDGTTS 57
           M  TP Y++++  +  N++      +        ++ A K F    M     +   G   
Sbjct: 28  MYGTPLYVMNETMIRENINRFKSSLQKYFGENGLIIYASKAFCTKAMCQIAKEEGIGLDV 87

Query: 58  SSLYEVMLGHEK-FGGETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDKAQKLH 115
            S  E+       F  +   ++   K  +   + +     I+ +   +L       +  +
Sbjct: 88  VSGGELYTALSVNFDPDKIFFHGNNKTYDELEMAVEKGVKIVLDNFDELEMLSLICKTKN 147

Query: 116 K--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFH 164
           K   + +RI P +           +  S+ G   ++          ++ +  ++ GL  H
Sbjct: 148 KKADVLIRIKPGIEAHTHEFIRTGQIDSKFGVALENGEAFSMVQKVLQRQELSLVGLHCH 207

Query: 165 NNCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
              +      F      ML+ + K       Q++ + LGGG       +      ++  E
Sbjct: 208 IGSQIFETAPFKLAARVMLEFMLKIKNELGWQVDILDLGGGFGIKYTAHDEPPKIEKFIE 267

Query: 221 FSEK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI------VDS 263
              +               I LEPG +IV        T+  I E             +  
Sbjct: 268 AIAEEVEEFCSLRGLKKPFIVLEPGRSIVGEAGITLYTIGSIKEIPNVRNYASVDGGMTD 327

Query: 264 SVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323
           +    +                      + GR C +GDI  +      +K G  ++    
Sbjct: 328 NPRYALYQARYDAYVVENPLGQRTKVYTIAGRCCESGDILIKDIKLPELKTGQHLAILAT 387

Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
             YN +  + +N    P + +         ++  +Y D   N
Sbjct: 388 GAYNYSMSSNYNRFPRPAVVLLKNGQARVIVKRETYGDLVRN 429


>gi|307250800|ref|ZP_07532729.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306857159|gb|EFM89286.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
          Length = 416

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 62/386 (16%), Positives = 116/386 (30%), Gaps = 25/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  +   + + + +   G    S  E
Sbjct: 26  GTPAYIYSRATLERHWHAFDKAFGSHPHLICFAVKSNSNIALLNVMARLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +              ++   K       A+          ++++L++  + A +L K   
Sbjct: 86  LERVLAAGGKPSKVVFSGVAKSHSEIQRALEVGIRCFNIESIAELHRINEVAGQLGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G       E            + G+  H   +  
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVTQAREVYRLAKTLPNVKITGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
               F         + ++      ++  + LGGG+             +  K   EK   
Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGIELHHLDLGGGLGVPYNGEEPPHPTEYAKALLEKLKG 265

Query: 228 ----QIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
               +I LEPG AI  N   L T V  +     +N  IVD+ +   +   L         
Sbjct: 266 YADLEIILEPGRAITANAGILVTKVEYLKANEDRNFAIVDTGMNDMIRPALYEAYMQITE 325

Query: 283 PNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +           V G  C   D  G+      ++ GD I+      Y     + +N   
Sbjct: 326 VDQSLSREKAVYDVVGPICETSDFLGKDRELA-IEQGDLIAMRSAGAYGAAMSSTYNSRP 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364
                + + D         S+ D + 
Sbjct: 385 QAVEIMVDGDQAYLIKARASFADLWR 410


>gi|217969261|ref|YP_002354495.1| diaminopimelate decarboxylase [Thauera sp. MZ1T]
 gi|217506588|gb|ACK53599.1| diaminopimelate decarboxylase [Thauera sp. MZ1T]
          Length = 423

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 61/385 (15%), Positives = 119/385 (30%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L                 +  A+K  +  G+     +   G    S  E
Sbjct: 35  GTPTYVYSRAALAAAFAAWQDALAGRRALVCYAVKANSNLGILSVFARLGAGFDIVSGGE 94

Query: 63  VMLGHEKFG-GETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G  +   ++   K       A+L+        + ++L      A +L     
Sbjct: 95  LARVLAAGGRADKVVFSGVGKTRAEMRQALLAGIRCFNVESAAELEHLDAVAGELGVRAP 154

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D      +       ++ G+  H   +  
Sbjct: 155 VSLRVNPDVDPKTHPYISTGLKGNKFGVAFADAPAIYRRAAALPNLHITGVACHIGSQLL 214

Query: 171 ---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
                   +  L+++ +        +E I LGGG+    +D       + L    E +  
Sbjct: 215 DRAPIAEAAQKLRDLVEHLAADGMALEHIDLGGGLGIRYRDETPPPVAEYLAPLLEVFAG 274

Query: 226 -SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIY- 282
            + ++  EPG ++V N   L T +  +     KN  IVD+++       L       +  
Sbjct: 275 RAEELCFEPGRSLVGNAGLLLTRIEYLKPGETKNFAIVDAAMNDLARPALYDAWHEVVEV 334

Query: 283 --PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                 P T  V G  C +GD          V  GD ++      Y +   + +N     
Sbjct: 335 AARTHAPSTYDVVGPICESGDFLARERSLA-VAEGDLLAILSAGAYGMTMASNYNTRPRA 393

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + +           +  + +  
Sbjct: 394 AEILVDGASAHVVRERETVEELFAR 418


>gi|299538364|ref|ZP_07051647.1| diaminopimelate decarboxylase [Lysinibacillus fusiformis ZC1]
 gi|298725951|gb|EFI66543.1| diaminopimelate decarboxylase [Lysinibacillus fusiformis ZC1]
          Length = 439

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 63/400 (15%), Positives = 125/400 (31%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP ++ D   +     + +   K  GVK  +  A K FA   ++    +        S 
Sbjct: 30  GTPLFVYDTALIRKRARSFIDTFKKLGVKAEVAYASKAFACVAVYQLAAEENLSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E   ++   K          S    I+ +   ++   KD +++  +K
Sbjct: 90  GELFTALKAGFPAERIHFHGNNKSIAEIELAFDSKIGCIVVDNFYEIQLLKDISERRQQK 149

Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEK-----CKDKIESEIKN----VNGLMFHNN 166
           +   LR+ P V           +  S+ G         +  +    +    + GL  H  
Sbjct: 150 MRILLRVTPGVEAHTHDFITTGQADSKFGFDLNNGQADEAFQQTFNHEFLELLGLHCHIG 209

Query: 167 CENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD-----------KDYPV 211
            +      F      ++  I             ++LGGG                    +
Sbjct: 210 SQIFDTAGFGLAGEKLIDKISDWNKTHGFTCTVLNLGGGFGIRYTEEDAPLEPQVYVEDM 269

Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHV 269
               +           +I++EPG ++V +  T   T+       +++  + VD  +  ++
Sbjct: 270 ITVVKNKATVLGLKMPEIWIEPGRSLVGDAGTSLYTIGSQKTVPDVRKYIAVDGGMSDNI 329

Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   +  +           V G+ C +GD        +    GD ++      
Sbjct: 330 RPALYDAKYEAVIASKANEPKDELYTVAGKLCESGDKLIIDAKLQDAASGDVLAIFCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  + +N +  P +          AIR  SY D   N
Sbjct: 390 YGYSMASNYNRVPRPAVVFVEDGQHQLAIRRESYEDIVQN 429


>gi|307636984|gb|ADN79434.1| diaminopimelate decarboxylase [Helicobacter pylori 908]
 gi|325995576|gb|ADZ50981.1| Diaminopimelate decarboxylase [Helicobacter pylori 2018]
 gi|325997172|gb|ADZ49380.1| Diaminopimelate decarboxylase [Helicobacter pylori 2017]
          Length = 405

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 68/385 (17%), Positives = 122/385 (31%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP+YL D  K+           +     +  ALK  +   +   L     G    S+ E
Sbjct: 12  KTPFYLYDFDKIKQAFLNYKEAFRGRKSLICYALKANSNLSILSLLANLGSGADCVSIGE 71

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++   K        +  N   +   +  +L   +  AQ L  K  
Sbjct: 72  IQRALKAGIKPYKIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIETIAQSLGIKAR 131

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           +  RINP++              ++ G   K+ +E       S       + FH   +  
Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHFHIGSQLL 191

Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224
                      +  I K        + +   GGGI  + ++       D+ Q +    + 
Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDAGGGIGVSYENEETIKLYDYAQGILNSLQG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I  EPG +IV  +  L T VL       K  VIVD+ +   +   L + + A    
Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVI 311

Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       V G  C + D F +      ++ GD+++ E V  Y  +  + +N    
Sbjct: 312 TPCRGREISPCDVVGPVCESSDTFLKDANLPELEPGDKLAIEKVGAYGSSMASQYNSRPK 371

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
                          +  +  D + 
Sbjct: 372 LLELALEDHKIRVIRKREALEDLWR 396


>gi|52080853|ref|YP_079644.1| diaminopimelate decarboxylase [Bacillus licheniformis ATCC 14580]
 gi|52786225|ref|YP_092054.1| hypothetical protein BLi02486 [Bacillus licheniformis ATCC 14580]
 gi|319645190|ref|ZP_07999423.1| diaminopimelate decarboxylase [Bacillus sp. BT1B_CT2]
 gi|52004064|gb|AAU24006.1| diaminopimelate decarboxylase [Bacillus licheniformis ATCC 14580]
 gi|52348727|gb|AAU41361.1| LysA [Bacillus licheniformis ATCC 14580]
 gi|317392999|gb|EFV73793.1| diaminopimelate decarboxylase [Bacillus sp. BT1B_CT2]
          Length = 439

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 68/399 (17%), Positives = 127/399 (31%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   +           K AG   ++  A K F++  M     Q        S 
Sbjct: 30  GTPLYVYDVALIRERARKFQKAFKEAGLKAQVAYASKAFSSVAMIQLAEQEGLSLDVVSG 89

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK--LH 115
            E+       F  E   ++   K  E  A+        I+ +   ++   +D  ++    
Sbjct: 90  GELFTAIKAGFPAERIHFHGNNKSPEELAMALEHQIGCIVLDNFHEIAITEDLCKRSGQT 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             + LRI P V           +  S+ G         +  +  + S    + G+  H  
Sbjct: 150 VDVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQVEQAIEQVLRSSAFKLLGVHCHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFC------- 215
            +      F      I ++   +        E ++LGGG                     
Sbjct: 210 SQIFDTAGFVLAADKIFEKLAEWRETYSFIPEVLNLGGGFGIRYTKDDEPLAADVYVEKI 269

Query: 216 -QRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269
            + +K  +E +   I   ++EPG ++V +  T   T+    E         +D  +  ++
Sbjct: 270 IEAVKANAEHFGFDIPEIWIEPGRSLVGDAGTTLYTIGSQKEVPGIRKYVAIDGGMSDNI 329

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +     A    +    TA + G+ C +GD+         V+ GD ++      
Sbjct: 330 RPALYEAKYEAAVANRMNDACHDTASIAGKCCESGDMLIWDLEIPEVRDGDVLAVFCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  N +N I  P +           I+  +Y D   
Sbjct: 390 YGYSMANNYNRIPRPAVVFVEDGEAQLVIQRETYEDIVK 428


>gi|322381769|ref|ZP_08055723.1| diaminopimelate decarboxylase-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
 gi|321154157|gb|EFX46479.1| diaminopimelate decarboxylase-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
          Length = 445

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 67/400 (16%), Positives = 123/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++D+  +       +   +++G   ++  A K F    M     +        S 
Sbjct: 30  GTPLYVVDETLVRQRCQEFVSAFRDSGLKFQVAYASKAFCVKAMCRVAVEEGMSLDVVSD 89

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+M   E  F  E   ++   K  +   +   +     + +   ++      A  Q L 
Sbjct: 90  GELMTALESGFPPERIHFHGNNKTPQEIEMALRAGIGCFVVDNFVEMQLLHSMAAEQGLR 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNN 166
             + LRI P V           +  S+ G   +         +    E  ++ G+  H  
Sbjct: 150 VNVLLRITPGVEAHTHEYISTGQTDSKFGFDLENGSAFQAVQEASRLESFHLLGIHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFC------- 215
            +      F   ++ +               + I+LGGG                     
Sbjct: 210 SQIFEVEGFQIAVEKVAAFAVQVRDEMGISFQVINLGGGFGIRYTAEDTPLPVSQYVQAI 269

Query: 216 -QRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
              +K     Y   I   ++EPG +IV +  T   TV  I +       V     +  + 
Sbjct: 270 TNSIKTCFASYKYPIPEIWVEPGRSIVGDAGTTLYTVGTIKDIPGVRKYVSVDGGMTDNP 329

Query: 270 PDYLLYQESATIYPNTGPYTA----MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       I  N     A     V G+ C +GD+         V+ GD ++      
Sbjct: 330 RPALYQSVYEAILANRAKEEAAEVISVAGKCCESGDMLIWDVKLPKVQTGDILAVFCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           YN +  + +N I  P +           ++  S+     N
Sbjct: 390 YNYSMASNYNRIRRPAVVFVQNGQADIVVKRESFEYLLGN 429


>gi|169827284|ref|YP_001697442.1| diaminopimelate decarboxylase [Lysinibacillus sphaericus C3-41]
 gi|168991772|gb|ACA39312.1| Diaminopimelate decarboxylase [Lysinibacillus sphaericus C3-41]
          Length = 449

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 63/400 (15%), Positives = 125/400 (31%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP ++ D   +     + +   K  GVK  +  A K FA   ++    +        S 
Sbjct: 40  GTPLFVYDTALIRKRARSFIDTFKKLGVKAEVAYASKAFACVAVYQLAAEENLSLDVVSG 99

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E   ++   K          S    I+ +   ++   K+ +++  +K
Sbjct: 100 GELFTAIKAGFPAERIHFHGNNKSIAELELAFDSKIGCIVVDNFYEIQLLKEISERRQQK 159

Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEK-----CKDKIESEIKN----VNGLMFHNN 166
           +   LR+ P V           +  S+ G         +  +    +    + GL  H  
Sbjct: 160 MRILLRVTPGVEAHTHDFITTGQADSKFGFDLNNGQADEAFQQTFNHEFLELLGLHCHIG 219

Query: 167 CENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD-----------KDYPV 211
            +      F      ++  I             ++LGGG                    +
Sbjct: 220 SQIFDTAGFGLAGEKLIDKISDWNKAHGFTCTVLNLGGGFGIRYTEEDAPLEPQVYVEDM 279

Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHV 269
               +           +I++EPG ++V +  T   T+       +++  + VD  +  ++
Sbjct: 280 ITVVKNKATVLGLKMPEIWIEPGRSLVGDAGTSLYTIGSQKTVPDVRKYIAVDGGMSDNI 339

Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   I  +           V G+ C +GD        +    GD ++      
Sbjct: 340 RPALYDAKYEAIIASKANEPKNEIYTVAGKLCESGDKLIIDAKLQDAASGDVLAIFCTGA 399

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  + +N +  P +          AIR  SY D   N
Sbjct: 400 YGYSMASNYNRVPRPAVVFVENGQHQLAIRRESYEDIVQN 439


>gi|326803676|ref|YP_004321494.1| diaminopimelate decarboxylase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650651|gb|AEA00834.1| diaminopimelate decarboxylase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 438

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 72/401 (17%), Positives = 137/401 (34%), Gaps = 38/401 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ + +   T +     K     ++ A K F    +   +N+      + S 
Sbjct: 29  GTPLYIYDQKGIKDQAKTFINGFHSKKFTTHIIYASKAFLNLYIAQLINEQGCYLDAVSG 88

Query: 61  YEVM-LGHEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+  L      GE   ++   K       A+     T + ++ +   K +   + L+K+
Sbjct: 89  GEIYTLLAAGVPGEKIYFHGNNKTESEIILALEQGIGTFVIDSQTDFYKVEKIVKSLNKQ 148

Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNN 166
             + LRINP +  S       +R  S+ G            K+ ++S+  +  G   H  
Sbjct: 149 AKVLLRINPGIEASTHKYIQTSRDDSKFGMSSHDEDTVALVKEMVKSDWFDFAGFHCHIG 208

Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF-------- 214
            +       F     ML    +       Q+  I+LGGG                     
Sbjct: 209 SQILEERFFFEEADLMLGFCRQMEEETGCQVREINLGGGFGVYYSQADRPFDYEKFLQSY 268

Query: 215 ----CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN--IKNLVIVDSSVEAH 268
                  + ++  ++   + +EPG A++ +  T   +V  +      K  V VD  +  +
Sbjct: 269 IQVIEAAINQYGLEHIDTVSIEPGRALINDFGTALYSVGGVKHTLAGKPFVFVDGGMSDN 328

Query: 269 VPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
           +   L   +     A    +       V G+ C  GD   +       +IGD +    V 
Sbjct: 329 IRPALYQAKYEAALANRMNDEVEGEYRVAGKLCETGDQLVQDAPLPEARIGDLLVIPRVG 388

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            Y     + +N +  P +       +  A++  SY D   N
Sbjct: 389 AYTYTMSSNYNRLGRPALVFVEDGQSYLAVKRESYQDLLRN 429


>gi|91762456|ref|ZP_01264421.1| Diaminopimelate decarboxylase [Candidatus Pelagibacter ubique
           HTCC1002]
 gi|91718258|gb|EAS84908.1| Diaminopimelate decarboxylase [Candidatus Pelagibacter ubique
           HTCC1002]
          Length = 404

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 68/382 (17%), Positives = 132/382 (34%), Gaps = 21/382 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y    ++L  N+        +    +  A+K      +   + +   G    S+ E
Sbjct: 23  GTPTYCYSHKRLTENIKKFKKNFSSFSPLICFAVKSNTNVNLIREIRKLGLGADVVSMGE 82

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--K 117
           +M+        +   ++   K  +  +   +     I   + S++ + +  A+   K   
Sbjct: 83  LMMAIKAGIDPKKIVFSGVGKTSKEISYAIDKKILLINAESKSEIIEIEKIAKSKKKIVN 142

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170
           IG+R+NP+            +  ++ G   K           S+  N+  L  H   +  
Sbjct: 143 IGIRLNPNTDAKTLKQISTGKKENKFGVDEKTFFELVNFTNHSKNINLKCLSVHIGSQIL 202

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSEKYS 226
               +  ML  + K         E+I LGGG+  + +        + +   +++F +   
Sbjct: 203 DHKPYEKMLNVVNKIIKKSGHIFEFIDLGGGMGISYEKNSKKLNYQKYNIAIQKFLKGQK 262

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT 285
            +I  EPG +IV N   L + V+ I EN K   I+ D+++   +   L      TI    
Sbjct: 263 TKIIFEPGRSIVGNIGFLISQVIYIKENTKKDFIILDAAMNDLMRPALYGANHQTIPVVK 322

Query: 286 GP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                  T    G  C + D F      + +K  D +   DV  Y ++  + +N    P 
Sbjct: 323 NNRISNKTYEFVGPICESTDKFTTIKGFQKLKEKDLVIMCDVGAYGMSLSSNYNVRPKPA 382

Query: 342 IAVKNVDGTIKAIREFSYNDYY 363
             +          +     D  
Sbjct: 383 ELIIKGSKINIIKKRQKLKDLI 404


>gi|17986368|ref|NP_539002.1| diaminopimelate decarboxylase [Brucella melitensis bv. 1 str. 16M]
 gi|17981958|gb|AAL51266.1| diaminopimelate decarboxylase [Brucella melitensis bv. 1 str. 16M]
          Length = 421

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 63/389 (16%), Positives = 118/389 (30%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+  +  +  +         +    +  ALK  +   +   L +   G  + S  
Sbjct: 25  VGTPFYVYSRATIERHFRVFHDAFADMDTLVTYALKANSNQAVLTALAKLGAGADTVSQG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHK 116
           E+              ++   K       A+ +        +  +L     +  A     
Sbjct: 85  EIRRALAAGIPANRIVFSGVGKTPREMDFALEAGIYCFNVESEPELEILSARAVAAGKVA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            + LRINP V           +  ++ G        +  +       NV G+  H   + 
Sbjct: 145 PVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARAAYARAASLPGLNVVGIDMHIGSQI 204

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221
                F      +    KE       I  + +GGG+    +           + Q + + 
Sbjct: 205 IDLEPFDNAFALMAELVKELQADGHNIRHVDVGGGLGIPYRTPNTPPPPPVAYAQIVAKH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278
            +   ++   EPG  IV N   L T V+ + E + KN VIVD+++   +   L       
Sbjct: 265 IKPLGLKTVFEPGRLIVGNAGLLVTEVIFVKEGDAKNFVIVDAAMNDLIRPTLYDAFHDI 324

Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                   N     A   G  C  GD  G          GD I+      Y     + +N
Sbjct: 325 RPVIMPNDNAPRIRADFVGPVCETGDYLGLDREVAKPAPGDLIAICTTGAYGAVLSSTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    + + +         +Y +   
Sbjct: 385 SRLLIPEVLGDGERYHVVRPRRTYEELLA 413


>gi|238025969|ref|YP_002910200.1| Diaminopimelate decarboxylase [Burkholderia glumae BGR1]
 gi|237875163|gb|ACR27496.1| Diaminopimelate decarboxylase [Burkholderia glumae BGR1]
          Length = 423

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 63/389 (16%), Positives = 115/389 (29%), Gaps = 27/389 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L           +     L +A+K  +  G+ +   +   G    S  E
Sbjct: 28  DTPLYVYSRAALTAAYQAYAKACEGRRASLHVAVKANSNLGVLNVFARLGAGFDIVSGGE 87

Query: 63  VMLGHEKFGGETHAYNVAY---KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G   H          D    A+ +        +V +L++    A  L     
Sbjct: 88  LARVLAAGGKAEHVVFSGVAKSADEMRLALEAGVKCFNVESVPELDRLNAVAGSLGKRAP 147

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D   +           V G+  H   +  
Sbjct: 148 VSLRVNPDVDPKTHPYISTGLKANKFGVAFADARATYRAADALPNLQVAGIDCHIGSQIT 207

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               +   L    ++ ++       I  + +GGG+  T  D    D    ++    K   
Sbjct: 208 ELSPYLDALDKVLDLVEQIEADGIAIHHVDVGGGLGITYADETPPDIGAFVQALFAKLDA 267

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                 ++  EPG ++  N   L T V  +     KN  IVD+ +       +     A 
Sbjct: 268 RGHGHRELCFEPGRSLTGNAGILLTRVEFLKPGEEKNFAIVDAGMNDLARPAMYEAYHAI 327

Query: 281 IYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
           +              V G  C +GD  G       +  GD ++      Y     + +N 
Sbjct: 328 VPVRQTSAHASAVYDVVGPVCESGDWLGRERTLA-IAAGDLLAIRSAGAYGFAMSSNYNT 386

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYNN 365
                  + +        +  +    Y N
Sbjct: 387 RPRAAEVLVDGQNAYLVRQRETIASLYEN 415


>gi|256420454|ref|YP_003121107.1| diaminopimelate decarboxylase [Chitinophaga pinensis DSM 2588]
 gi|256035362|gb|ACU58906.1| diaminopimelate decarboxylase [Chitinophaga pinensis DSM 2588]
          Length = 406

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 67/385 (17%), Positives = 117/385 (30%), Gaps = 25/385 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+   +K+    +      +    +   A K      +   +N    G  + S+ E
Sbjct: 21  GTPVYIYHAEKIKIQYEKLQTAFQKTDARFFYACKALTNINILKYINSLGCGLDTVSIQE 80

Query: 63  VMLGH-EKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           V LG    F      +     D  EI A       I  + +S L +F ++       I +
Sbjct: 81  VHLGLKAGFAPNNIIFTPNCVDLDEIIAAKELGVNINIDNISILEQFGNR-FGDSYPICI 139

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIE------SEIKNVNGLMFHNNCENKSFLC 174
           R+NP +              S+ G              S    V GL  H   E K    
Sbjct: 140 RLNPHIMAGGNYKISTGHVDSKFGISIHQLRHIERIVKSTKLKVTGLHMHTGSEIKDVDV 199

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK---------- 224
           F   ++ + ++       +E+I LG G     +    +     L     +          
Sbjct: 200 FLRGVEIMFEQ-AVHFPDLEFIDLGSGFKVAYQAGDPETDINLLGRKLSEAFNKFAATYK 258

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATIYP 283
             +Q++ EPG+ +V+ +         I +    + + V+S     +              
Sbjct: 259 RPLQVWFEPGKFLVSQSGYFVVKANVIKQTTATVFVGVNSGFNHLIRPMFYDAFHLIKNI 318

Query: 284 NTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
           +    T     + G  C   D FG       VK GD + F +   Y     + FN    P
Sbjct: 319 SNPKGTERIYTIVGNICET-DTFGWDRKLNEVKEGDFLVFYNAGAYGFEMSSNFNSRLKP 377

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              +          +  +  D   N
Sbjct: 378 AEVLVKDGKAQLIRKRDTLEDLLRN 402


>gi|126661847|ref|ZP_01732846.1| diaminopimelate decarboxylase [Flavobacteria bacterium BAL38]
 gi|126625226|gb|EAZ95915.1| diaminopimelate decarboxylase [Flavobacteria bacterium BAL38]
          Length = 401

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 65/386 (16%), Positives = 117/386 (30%), Gaps = 27/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            +P Y+ D +K+    +      K     K+  A+K  +   + + L     G  + S+ 
Sbjct: 14  GSPLYVYDAEKIAFQYNRLQNAFKKVERFKVHYAVKALSNISVLNYLKSLGSGLDTVSIQ 73

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLHKKIG 119
           EV+LG    F      Y       E    ++N    I  + +S L +F  K    +  + 
Sbjct: 74  EVLLGLHAGFDPRDIIYTPNGVSMEEIETVANFGVQINIDNLSILEQFGTK--HPNVPVC 131

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFL 173
           +RINP V              S+ G                  ++NG+  H   +     
Sbjct: 132 IRINPHVMAGGNANISVGHIDSKFGISIHQLPHILRIIENTKMHINGIHMHTGSDILDVE 191

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI---- 229
            F    + I  E       +++I  G G     K   ++   +       K  +      
Sbjct: 192 VFLYAAE-ILFETAKNFKDLDFIDFGSGFKVPYKKDDIETNVEEFGTKLTKRFLAFEKEY 250

Query: 230 ------YLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESA--T 280
                   EPG+ +V+        V  + +        +DS     +   L   +     
Sbjct: 251 GRPLTLAFEPGKFLVSEAGYFLAKVNVVKQTTSTVFAGIDSGFNHLIRPMLYGSQHHIEN 310

Query: 281 IYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
           I    G      V G  C   D F        +  GD + F +   Y  +  + +N    
Sbjct: 311 ISNPKGKERYYSVVGYICET-DTFASNRRISEIHEGDILCFRNAGAYCFSMASNYNSRLK 369

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365
           P   +             +++D   N
Sbjct: 370 PAEVLWKDGKGHLIRERETFDDILKN 395


>gi|119899943|ref|YP_935156.1| LysA2 protein [Azoarcus sp. BH72]
 gi|119672356|emb|CAL96270.1| LysA2 protein [Azoarcus sp. BH72]
          Length = 424

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 57/380 (15%), Positives = 111/380 (29%), Gaps = 23/380 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L                 +  A+K  A  G+     Q   G    S  E
Sbjct: 36  GTPTYVYSRAALTAAFRDWQAALAGRRSLVCYAVKANANLGVLSVFAQLGAGFDIVSGGE 95

Query: 63  -VMLGHEKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
              +       +   ++   K       A+ +        +  +L +  + A +L +   
Sbjct: 96  LARVIAAGGRADRVVFSGVGKSRAEMRQALAAGIRCFNVESAPELERLNEVAGELGQRAP 155

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G    + +E            ++G+  H   +  
Sbjct: 156 IALRVNPDVDPKTHPYISTGLKSNKFGVAFGEALELYRRAATLPHLRISGIACHIGSQLL 215

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224
                +     +     +       ++ I LGGG+    +D        +   L      
Sbjct: 216 DPAPVAEAAAKVLGLVDQLSAEGIVLDHIDLGGGLGIRYRDETPPSVAAYLAPLLAAFGD 275

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
              +I  EPG ++V N   L T V  +     KN  IVD+++       L       +  
Sbjct: 276 RREEICFEPGRSLVGNAGLLLTRVEYLKHGEEKNFAIVDAAMNDLARPALYDAYHEAVAV 335

Query: 284 NTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                      + G  C +GD          ++ GD ++      Y +   + +N     
Sbjct: 336 CRSDAPRQRYEIVGPICESGDFLAHDRELA-LRDGDLVALLSAGAYGMTMSSNYNTRPRA 394

Query: 341 TIAVKNVDGTIKAIREFSYN 360
              + +           +  
Sbjct: 395 AEVMVDGGQVHLVRERETVE 414


>gi|308182206|ref|YP_003926333.1| carboxynorspermidine decarboxylase [Helicobacter pylori PeCan4]
 gi|308064391|gb|ADO06283.1| carboxynorspermidine decarboxylase [Helicobacter pylori PeCan4]
          Length = 406

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 139/401 (34%), Positives = 210/401 (52%), Gaps = 39/401 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y+++ ++L  N      +R+ +G K+LLALK +A W  F  L Q ++G  +S LY
Sbjct: 7   IPTPCYVLESERLEKNAKILEIVRQQSGAKILLALKGYAFWREFGILRQKLNGCCASGLY 66

Query: 62  EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112
           E  L  E+FGG     E   Y+ A+K+ E+ A+L    +IIFN+  Q     ++  DK +
Sbjct: 67  EAKLAFEEFGGRESQKEICVYSPAFKEAEMSAILPLATSIIFNSFHQYATYKDRILDKNK 126

Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162
           +L        K+GLRINP  S    ++ +P    SRLG    +  +   ++    V+GL 
Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPVIYNPCSKVSRLGITPSEFEKGAKEHGLEGVSGLH 186

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
           FH +CE          L+++EK F  ++  + W++ GGG H T  DY V    Q +K+F 
Sbjct: 187 FHTHCEQN-ADALCRTLEHVEKHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQTIKDFK 245

Query: 223 EKYSVQI--YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280
           E+Y   I   LEPGEAI      L  +V+DI +N + + I+D+S  AH+PD L      +
Sbjct: 246 ERYHNNIEVILEPGEAIGWQCGFLIASVIDIVKNDQEIAILDASFSAHMPDCLEMPYRPS 305

Query: 281 IYP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
           I                  N G ++  + G +CLAGD  G F FE P+K GD+I F+D+ 
Sbjct: 306 ILKVSVENDEELIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFEAPLKRGDKIVFQDML 365

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            Y I + N FNG+ +P++A  +  G  K ++ FSY DY N 
Sbjct: 366 HYTIVKNNSFNGVPLPSLAKLDQQG-FKILKNFSYEDYKNR 405


>gi|150019596|ref|YP_001311850.1| diaminopimelate decarboxylase [Clostridium beijerinckii NCIMB 8052]
 gi|149906061|gb|ABR36894.1| diaminopimelate decarboxylase [Clostridium beijerinckii NCIMB 8052]
          Length = 431

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 70/400 (17%), Positives = 122/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P Y+ D+  +           K      ++  A K F    M   L +        S 
Sbjct: 29  GSPLYVFDEDLIREYCRDYRKYFKCEENNNRVAFAGKAFLTLQMCKLLKEENMCLDVVSG 88

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+      +F  E   ++   K        V       + +   +++   D A      
Sbjct: 89  GELYTAYKSEFPLEKVMFHGNNKTLSEIELGVRLGVGNFVVDNYYEIDALNDIAKEYNKV 148

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           + I LRI P +           +  S+ G         +  K  I  E  N+ G+  H  
Sbjct: 149 QNIYLRITPGIEAHTHDYIKTGQIDSKFGFAPVGTVIEDAIKKAISLENINLAGIHCHIG 208

Query: 167 CENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            +      +      ML+ +     +    I  +  GGG      +       +      
Sbjct: 209 SQIFDLEPYEDAVEIMLELVRNTKENLGYLINEVDFGGGFGIYYTEGDEPRSTEEYCSTI 268

Query: 223 EKYSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
                ++            +EPG +IV N  T   TV  + E       V     +  ++
Sbjct: 269 INKVDEVCARTGQERPILTIEPGRSIVANAGTTLYTVGSVKEIPSVRKYVSVDGGMTDNI 328

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   E   I           T  + G+ C +GDI  E      VK GD ++      
Sbjct: 329 RPALYNAEYECILASGVEGDREETVTISGKCCESGDILLENIKIPEVKSGDILAIMTTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  + +N I  P + +   + T    +  SY+D   N
Sbjct: 389 YGYSMSSNYNRIPKPAVVMVKDNETRLICKRESYDDLLKN 428


>gi|291612946|ref|YP_003523103.1| diaminopimelate decarboxylase [Sideroxydans lithotrophicus ES-1]
 gi|291583058|gb|ADE10716.1| diaminopimelate decarboxylase [Sideroxydans lithotrophicus ES-1]
          Length = 433

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 63/402 (15%), Positives = 119/402 (29%), Gaps = 41/402 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L ++        K+    +  A+K  +   + +   +   G    S  E
Sbjct: 27  GTPCYVYSRAALTDSYRQFAEALKSRDHLICYAVKANSNLAILNLFARLGAGFDIVSGGE 86

Query: 63  VMLGHEKFGG--ETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKA--QKLHKK 117
           +       G   +     V   + E+   L          +  +L++    A        
Sbjct: 87  LQRVLAAGGAASKVVFSGVGKSEAEMRQALEAEILCFNVESAPELDRLNALAGSMGKVAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LR+NP V              ++ G    + +E   K        V G+  H   +  
Sbjct: 147 VSLRVNPDVDAKTHPYISTGLKQNKFGVAYTEALELYRKAAAMPNLRVTGMDCHIGSQLT 206

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK---EFSEK 224
               F A  + +     +       +E + LGGG+     D       +  K      + 
Sbjct: 207 ETSPFIAAAEKVLALVDKLAAAGITLEHLDLGGGLGIRYDDETPPSIAEYGKALLAVLQG 266

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
            S ++ +EPG  +V N   L T +  +     KN  IVD+++   +   L     A +  
Sbjct: 267 RSEKLIVEPGRVLVGNAGVLLTRIEYLKHGEEKNFAIVDAAMNDLMRPALYDAWHAILPV 326

Query: 284 N---------------------TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFED 322
                                 +      V G  C  GD  G       V  GD ++   
Sbjct: 327 QRRQNAPLSNSLPQAGERTSEKSNSQIYEVVGPICETGDFIGHAREMA-VDKGDALAVMS 385

Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              Y ++  + +N        + +           +    Y 
Sbjct: 386 AGAYGMSMSSNYNTRPRAAEVMVDGAVVHLVRERETVRQLYA 427


>gi|86132344|ref|ZP_01050939.1| Diaminopimelate decarboxylase [Dokdonia donghaensis MED134]
 gi|85817263|gb|EAQ38446.1| Diaminopimelate decarboxylase [Dokdonia donghaensis MED134]
          Length = 401

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 66/386 (17%), Positives = 118/386 (30%), Gaps = 27/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            +P Y+ D   +    +      K+   ++L  A+K  +   +   L     G  + S+ 
Sbjct: 14  GSPVYVYDADTITAQYNRLTNAFKSVKQLRLNYAVKALSNLSILQHLKGLGSGLDTVSIQ 73

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLHKKIG 119
           EV LG    F  +   +            ++     I  + +S L +F  K       + 
Sbjct: 74  EVQLGLKAGFTPDRIIFTPNGVSLGEIEEVAAMGVQINIDNLSILEQFGTK--HPETPVC 131

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFL 173
           +RINP V              S+ G                  N+NG+  H   +     
Sbjct: 132 IRINPHVMAGGNTNISVGHIDSKFGISIHQLPHVLRIVENTGMNINGIHMHTGSDILDID 191

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY--- 230
            F    + I  E     + + +I  G G     K+  ++   + L E   K         
Sbjct: 192 VFVYATE-ILFETAKQFSDLTFIDFGSGFKVPYKEGDIETNIEELGEKLGKRFNAFAKAY 250

Query: 231 -------LEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLY--QESAT 280
                   EPG+ +V+ +      V  + +        VDS     +   L     E   
Sbjct: 251 KKPLTLTFEPGKFLVSESGKFLVQVNVVKQTTSTVFAQVDSGFNHLIRPMLYGSQHEINN 310

Query: 281 IYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
           I    G      V G  C   D F        +  GD ++F++   Y     + +N    
Sbjct: 311 ISNPNGRERFYSVVGYICET-DTFANNRRIAEISEGDILAFDNAGAYCFTMASNYNSRYR 369

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365
           P   +          +  +++D   N
Sbjct: 370 PAEVLIKGGKAHLIRKRETFDDLIAN 395


>gi|110639661|ref|YP_679871.1| diaminopimelate decarboxylase [Cytophaga hutchinsonii ATCC 33406]
 gi|110282342|gb|ABG60528.1| diaminopimelate decarboxylase [Cytophaga hutchinsonii ATCC 33406]
          Length = 410

 Score =  223 bits (568), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 62/385 (16%), Positives = 118/385 (30%), Gaps = 25/385 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ + +K+L+             V++  A K      +   L     G    S+ E
Sbjct: 23  GTPLYVYNSEKILSQYKRLHDAFSGVNVRIKYAAKALTNQAILKLLKGAGAGVDVVSIQE 82

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           + L     F  +   +     D             I  + +  L +F            +
Sbjct: 83  LQLALKAGFDKKDIMFTPNCVDFSEIEEAVGYGVQINIDNIPFLKQFGQV-YGSSVPCCV 141

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174
           RINP +     +        S+ G   +        ++     VNG+  H+  + KS   
Sbjct: 142 RINPHIDAGGNVKIMTGHKGSKFGISIEQVNEIYEVVDEYEILVNGVHVHSGSDFKSADA 201

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI----- 229
           F    + +         ++ ++  G G   + K+       + L +              
Sbjct: 202 FVRAAEVV-YSVAMQFDKLTFLDFGSGFKVSYKEGDYVTDIEELGKKMTDSFNAFCLNYG 260

Query: 230 -----YLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATIYP 283
                + EPG+ +V+ +  L  T   I E      I V+S +   +   +       +  
Sbjct: 261 KKLDIWFEPGKFLVSESGMLLVTCTVIKETPACNFIGVNSGLNHLIRPMMYGSHHDIVNV 320

Query: 284 NTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
           +          V G  C   D FG   F +  K GD I  ++   Y  +  + +N    P
Sbjct: 321 SNPDGDKKMYTVVGYICET-DTFGSDLFIEETKAGDIIGLKNAGAYGFSMSSNYNSRFRP 379

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + +        +  +  D   N
Sbjct: 380 AEVLVHKGKHQLIRKRETMEDLLKN 404


>gi|165976954|ref|YP_001652547.1| diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|303253397|ref|ZP_07339540.1| diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|307246442|ref|ZP_07528515.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307248567|ref|ZP_07530582.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|307255425|ref|ZP_07537232.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307259877|ref|ZP_07541591.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|165877055|gb|ABY70103.1| diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|302647742|gb|EFL77955.1| diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|306852646|gb|EFM84878.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306854917|gb|EFM87105.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306861609|gb|EFM93596.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306866047|gb|EFM97921.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
          Length = 416

 Score =  223 bits (568), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 62/386 (16%), Positives = 115/386 (29%), Gaps = 25/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +   + + + +   G    S  E
Sbjct: 26  GTPAYIYSRATLERHWHAFDKAFGAHPHLICFAVKSNSNIALLNVMARLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +              ++   K       A+          ++++L++  + A +L K   
Sbjct: 86  LERVLAAGGEPSKVVFSGVAKSHSEIQRALEVGIRCFNIESIAELHRINEVAGQLGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G       E            + G+  H   +  
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVTQAREVYRLAKTLPNVKITGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
               F         + ++      ++  + LGGG+             +  K   EK   
Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGIELHHLDLGGGLGVPYNGEEPPHPTEYAKALLEKLKG 265

Query: 228 ----QIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
               +I LEPG AI  N   L T V  +     +N  IVD+ +   +   L         
Sbjct: 266 YADLEIILEPGRAITANAGILVTKVEYLKANEDRNFAIVDTGMNDMIRPALYEAYMQITE 325

Query: 283 PNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +           V G  C   D  G+      ++ GD I+      Y     + +N   
Sbjct: 326 VDQSLSREKAVYDVVGPICETSDFLGKDRELA-IEQGDLIAMRSAGAYGAAMSSTYNSRP 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364
                + + D         S+ D + 
Sbjct: 385 QAVEIMVDGDQAYLIKARASFADLWR 410


>gi|190150854|ref|YP_001969379.1| diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|307264204|ref|ZP_07545795.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|189915985|gb|ACE62237.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|306870450|gb|EFN02203.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 416

 Score =  223 bits (568), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 62/386 (16%), Positives = 115/386 (29%), Gaps = 25/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +   + + + +   G    S  E
Sbjct: 26  GTPAYIYSRATLERHWHAFDKAFGAHPHLICFAVKSNSNIALLNVMARLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +              ++   K       A+          ++++L++  + A +L K   
Sbjct: 86  LERVLAAGGEPSKVVFSGVAKSHSEIQRALEVGIRCFNIESIAELHRINEVAGQLGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G       E            + G+  H   +  
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVTQAREVYRLAKSLPNVKITGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
               F         + ++      ++  + LGGG+             +  K   EK   
Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGIELHHLDLGGGLGVPYNGEEPPHPTEYAKALLEKLKG 265

Query: 228 ----QIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
               +I LEPG AI  N   L T V  +     +N  IVD+ +   +   L         
Sbjct: 266 YADLEIILEPGRAITANAGILVTKVEYLKANEDRNFAIVDTGMNDMIRPALYEAYMQITE 325

Query: 283 PNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +           V G  C   D  G+      ++ GD I+      Y     + +N   
Sbjct: 326 VDQSLSREKAVYDVVGPICETSDFLGKDRELA-IEQGDLIAMRSAGAYGAAMSSTYNSRP 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364
                + + D         S+ D + 
Sbjct: 385 QAVEIMVDGDQAYLIKARASFADLWR 410


>gi|49476269|ref|YP_034310.1| diaminopimelate decarboxylase [Bartonella henselae str. Houston-1]
 gi|49239077|emb|CAF28380.1| Diaminopimelate decarboxylase [Bartonella henselae str. Houston-1]
          Length = 421

 Score =  223 bits (568), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 63/388 (16%), Positives = 117/388 (30%), Gaps = 26/388 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      ++ N         +    +  A+K  +   +   L     G    S  
Sbjct: 25  VGTPFYCYSASAVVTNFKDYQNAFLDMPSLIAYAVKANSNQAVLRLLAANGAGADVVSEG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK----FKDKAQKLHK 116
           E+              Y+   K  +        D   FN  S+           A     
Sbjct: 85  ELRRALAAGIPAHRIVYSGVGKTVKEIDFALAHDIYCFNVESEPELEQLSVCAVALSKTA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCEN 169
           ++ LRINP V           +  ++ G          K   +     V G+  H   + 
Sbjct: 145 RVSLRINPDVDARTHRKITTGKSENKFGIPLSLAWDVYKKAAQLPGIQVCGVDMHIGSQI 204

Query: 170 ---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV-----KDFCQRLKEF 221
              K F     ++ +  ++       +  I +GGG+     +         D+   +++ 
Sbjct: 205 CDLKPFEDAFLIVADFVRQLRSHGYALTHIDIGGGLGIDYGNEHHSVPSLSDYAALVRKH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                + I LEPG +IV +   L T+VL +   N +N VIVD+++   +   L       
Sbjct: 265 IAPLGIHIILEPGRSIVGDAGVLVTSVLYLKRGNGRNFVIVDAAMNDLMRPTLYDAWQNV 324

Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +             A + G  C  GD          +  GD ++  +   Y     + +N
Sbjct: 325 LLVEQASKDALLMKADIVGAVCETGDYLALDRRVPTLATGDLLAIMEAGAYGAVMASTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY 363
              +    +              Y    
Sbjct: 385 SRLLVPEVLVQDTRYAVIRPRLDYAQLI 412


>gi|108562717|ref|YP_627033.1| diaminopimelate decarboxylase [Helicobacter pylori HPAG1]
 gi|107836490|gb|ABF84359.1| diaminopimelate decarboxylase [Helicobacter pylori HPAG1]
          Length = 405

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 69/385 (17%), Positives = 123/385 (31%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP+YL D  K+           K     +  ALK  +   +   L     G    S+ E
Sbjct: 12  KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLGSGADCVSIGE 71

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++   K        +  N   +   +  +L   +  AQ L  K  
Sbjct: 72  IYRALKAGIKPYRIVFSGVGKSGFEIEQALKLNILFLNVESFMELTTIEKIAQSLGIKAR 131

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           +  RINP++              ++ G   K+ +E       S       + FH   +  
Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHFHIGSQLL 191

Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224
                      +  I K        + +  +GGGI  + ++       D+ Q++    + 
Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQKILNALQG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I  EPG +IV  +  L T VL       K  V+VD+ +   +   L + + A    
Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVVVDAGMNDFLRPSLYHAKHAIRVI 311

Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       V G  C + D F +      +  GD+I+ E V  Y  +  + +N    
Sbjct: 312 TPSKGREISPCDVVGPVCESSDTFLKDVHLPELDPGDKIAIEKVGAYGSSMASQYNSRPK 371

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
                          +  +  D + 
Sbjct: 372 LLELALEDHKIRVIRKREALEDLWR 396


>gi|91785428|ref|YP_560634.1| diaminopimelate decarboxylase [Burkholderia xenovorans LB400]
 gi|91689382|gb|ABE32582.1| diaminopimelate decarboxylase [Burkholderia xenovorans LB400]
          Length = 420

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 56/386 (14%), Positives = 121/386 (31%), Gaps = 26/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L    +            + +A+K  +   + +   +   G    S  E
Sbjct: 28  GTPLYVYSRAALTAAWNAYAGACAGRRASVHVAVKANSNLAVLNVFARLGAGFDIVSGGE 87

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +          E   ++      +   +A+ +        ++ +L++    A        
Sbjct: 88  LARVLAAGGKAENTVFSGVGKNANEMREALAAGVKCFNVESIPELDRLNAVAAEMGKKAP 147

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           + LR+NP V              ++ G   +D   +           V G+  H   +  
Sbjct: 148 VSLRVNPDVDAKTHPYISTGLKSNKFGVAFEDARATYQAAAGMANLEVVGIDCHIGSQIT 207

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               +   +  +    ++      +I  I +GGG+  T  D    +  + ++   ++   
Sbjct: 208 EAAPYLDAVDKVLELVEQIEQDGLKIRHIDVGGGLGITYDDETPPEIGEFVRTVLDRIEA 267

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278
                 ++Y EPG ++V N   L T V  +     KN  IVD+++       +       
Sbjct: 268 RGHGHREVYFEPGRSLVGNAGVLLTRVEFLKPGAEKNFAIVDAAMNDLARPAMYEAYHAI 327

Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
              +  +   +   V G  C +GD  G       V+ GD ++      Y     + +N  
Sbjct: 328 DPVVKRDVPAHVYDVVGPVCESGDWLGRERLLA-VEPGDLLAIRSAGAYGFVMSSNYNTR 386

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYY 363
                 + +      A         +
Sbjct: 387 PRAAEVMVDGTQVHVARAREEVRQLF 412


>gi|255020055|ref|ZP_05292127.1| Diaminopimelate decarboxylase [Acidithiobacillus caldus ATCC 51756]
 gi|254970482|gb|EET27972.1| Diaminopimelate decarboxylase [Acidithiobacillus caldus ATCC 51756]
          Length = 421

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 59/382 (15%), Positives = 116/382 (30%), Gaps = 24/382 (6%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP Y+  +  L        +        L  A+K  A   + + L ++  G    S  E+
Sbjct: 33  TPTYVYSESYLRQRFHAFTHAL-GPQTTLCYAVKANANLSILNRLARWGAGFDIVSGGEL 91

Query: 64  MLG-HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--KI 118
                         ++     +D    A+ +    +   + ++L + +  A +L     I
Sbjct: 92  ARVLRAGGDPTRVVFSGVGKSRDEIRRALEAEIYCLNVESPAELARIEQVAAELGCRAPI 151

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCENKS 171
            +R+NP V  S           ++ G    +          S    V G+  H   +   
Sbjct: 152 AMRVNPDVEASTHPYIATGLRETKFGIPMAEAPLLYERAARSRHLEVLGVACHIGSQLLD 211

Query: 172 FLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYP---VKDFCQRLKEFSEKY 225
               +   + +    +  G     ++ + LGGG+     D       D+   L       
Sbjct: 212 LAPIAEAARRVVQLYEALGRQGIHLQHLDLGGGVGIRYHDEQAPTPADYAAILDAALGDL 271

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATI--- 281
            V+  +E G A+V N   L T V     N      V D+++   +   L           
Sbjct: 272 PVRRVVELGRALVGNAGALLTRVEYRKYNGNRAFCVVDAAMNDLLRPSLYGAWHEIWPLE 331

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                     V G  C +GD F +       ++ G+ ++      Y     + +N     
Sbjct: 332 RRAAAQAPMDVVGPVCESGDFFAKARPLPADLREGEVLAILGAGAYGFAMSSQYNSRPRA 391

Query: 341 TIAVKNVDGTIKAIREFSYNDY 362
              + +        R  +  + 
Sbjct: 392 AEILVHGTDARVIRRRETLGEL 413


>gi|332982022|ref|YP_004463463.1| diaminopimelate decarboxylase [Mahella australiensis 50-1 BON]
 gi|332699700|gb|AEE96641.1| diaminopimelate decarboxylase [Mahella australiensis 50-1 BON]
          Length = 429

 Score =  223 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 62/398 (15%), Positives = 127/398 (31%), Gaps = 36/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV-KLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP Y++D  ++ +     +   +  G   +L A K F    M   + Q   G    S  
Sbjct: 24  GTPLYVMDDTQIRDACRRYVSAIRQYGNGMVLYAGKAFTNIAMCKLIQQEGLGLDVVSGG 83

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+      +F  E    +   K  E   +      + ++ ++  ++   +  A+   K I
Sbjct: 84  ELYTAMKAEFPPERIYMHGNNKSYEELRMAVEYGIERVVIDSFHEVELLEQLARNYDKNI 143

Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNC 167
           G+  R+ P +           +  S+ G   +D          +      + GL  H   
Sbjct: 144 GVSVRVKPGIDAHTHHYIKTGQQDSKFGFGIEDGQIYRIIEYILTQPHLELKGLHCHIGS 203

Query: 168 ENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF--------- 214
           +             ML+ +          ++ I  GGG      +               
Sbjct: 204 QIFETDPYIETAQIMLELMWDINDTHGLNMDEIDFGGGFGIRYVEEDNPLAPEDYIDALT 263

Query: 215 --CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVP 270
              +   + + +   +I +EPG +I          V  I         V     +  +  
Sbjct: 264 DGIKAYCDNNARQYPRILIEPGRSIAGPAGITLYMVGAIKHIPDVRTYVSVDGGMADNPR 323

Query: 271 DYLLYQESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
             L   + + +  N        T  + G+ C +GD+         V+ GD ++  D   Y
Sbjct: 324 PALYQAKYSAMIANKADKPAECTVSIAGKCCESGDMLIWDIDLPKVEAGDILAVFDTGAY 383

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           N +  + +N + +P + +         +   SY+D  +
Sbjct: 384 NYSMASNYNRLPIPAVVLVKDGRAELMVSRQSYDDLIS 421


>gi|315169667|gb|EFU13684.1| diaminopimelate decarboxylase [Enterococcus faecalis TX1342]
          Length = 436

 Score =  223 bits (567), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 60/397 (15%), Positives = 129/397 (32%), Gaps = 37/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP ++ D   +              G+K  ++ A K F+   ++  L +        S 
Sbjct: 35  GTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYASKAFSCLAIYQVLKEEDIACDVVSG 94

Query: 61  YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDK--AQKLH 115
            E+    +      E   +       E+   L N   TI+ +   +++  ++    +   
Sbjct: 95  GELFTALKGGMESAEIEFHGNNKTPEELRYALDNKIGTIVIDNFYEIDLLEELLATRNQT 154

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           +K+  R++P V           +  S+ G         E     + +   +V G+  H  
Sbjct: 155 QKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASGQATEALVRLLSNPSFDVQGVHCHIG 214

Query: 167 CENKSFLCFSAMLKNIEKEFGHFI----TQIEWISLGGGIHFTDKDYPVK----DFCQRL 218
            +  +   F A ++ +      +          +++GGG                F +++
Sbjct: 215 SQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLNMGGGFGVQYTQQDEPLAPATFVEKI 274

Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
               + +         ++++EPG +++    T   TV    E    ++ V VD  +  ++
Sbjct: 275 VYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIYTVGAQKEVPGVRHFVSVDGGMGDNI 334

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L         A    +       V G+ C +GD+         VK GD ++      
Sbjct: 335 RPALYQAVYDGFLANRDGHDSVKKVTVVGKYCESGDVLLRDILLPEVKAGDLLAISSTGA 394

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
           Y  +  + +N    P +            R  +Y D 
Sbjct: 395 YGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYEDM 431


>gi|254198509|ref|ZP_04904930.1| diaminopimelate decarboxylase [Burkholderia pseudomallei S13]
 gi|169655249|gb|EDS87942.1| diaminopimelate decarboxylase [Burkholderia pseudomallei S13]
          Length = 423

 Score =  223 bits (567), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 57/388 (14%), Positives = 119/388 (30%), Gaps = 27/388 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++  +  L    +            + +A+K  +  G+ +   +   G    S  E
Sbjct: 28  GTPLFVYSRAALTAAYEAYAKACAGRRASIHVAVKANSNLGVLNVFARLGAGFDIVSGGE 87

Query: 63  VMLGHEKFG-GETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G      ++   K  D    A+ +        ++ +L++    A  L     
Sbjct: 88  LARVLAAGGRARDVVFSGVGKSADEMRVALEAGVKCFNVESIPELDRLNAVAASLGKRAP 147

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D   +           V G+  H   +  
Sbjct: 148 VSLRVNPDVDPKTHPYISTGLKANKFGIAFDDARATYRAAAALPNLEVVGIDCHIGSQIT 207

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               +   +    ++ +       QI  + +GGG+  T  D    D    ++    +   
Sbjct: 208 ELSPYLDAIDKLLDLVERIEADGVQIHHVDVGGGLGITYDDETPPDIGAYVRAVLARIDA 267

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                 +I+ EPG ++  N   L T V  + +   KN  IVD+++       +     A 
Sbjct: 268 RGHGQREIWFEPGRSLTGNAGILLTRVEFLKQGEEKNFAIVDAAMNDLARPAMYQAFHAI 327

Query: 281 I----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
           +      +       + G  C +GD  G       +  GD ++      Y     + +N 
Sbjct: 328 VPVAPRTDVAAAVYDIVGPVCESGDWLGRERLLA-IAPGDLLAIRSAGAYGFTMSSNYNT 386

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364
                  + +           +    + 
Sbjct: 387 RPRAAEVIVDGANAHLVRPRETVESLFE 414


>gi|332521816|ref|ZP_08398267.1| diaminopimelate decarboxylase [Lacinutrix algicola 5H-3-7-4]
 gi|332042646|gb|EGI78847.1| diaminopimelate decarboxylase [Lacinutrix algicola 5H-3-7-4]
          Length = 408

 Score =  223 bits (567), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 64/386 (16%), Positives = 115/386 (29%), Gaps = 27/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++P Y+ D Q + N              VK+  A+K  +   +   +     G  + S+ 
Sbjct: 14  ESPVYVYDSQTITNQYKRLTSAFNKVKNVKINYAVKALSNISILKLMRSLGAGLDTVSIQ 73

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIG 119
           EV LG    F  E   +            ++     I  + +S L +F  K       + 
Sbjct: 74  EVQLGLAAGFKAEDIIFTPNGVSLLEIETVAKLGCQINIDNLSILEQFGTK--HPKIPVC 131

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE------IKNVNGLMFHNNCENKSFL 173
           +RINP V              S+ G                   +NG+  H   +     
Sbjct: 132 IRINPHVMAGGNTNISVGHIDSKFGISIHQIPHILRIVENTNMTINGIHMHTGSDILDID 191

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY--- 230
            F    + I  E       +E+I  G G     K   ++   +   +             
Sbjct: 192 VFLYASE-ILFETAKNFKNLEFIDFGSGFKVPYKTGDIETNIEEFGDKLSARFNTFCKNY 250

Query: 231 -------LEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLY--QESAT 280
                   EPG+ +V+        V  + +        VDS     +   L     E   
Sbjct: 251 GKALTLAFEPGKFLVSEAGQFLAKVNVVKQTTSTVFAQVDSGFNHLIRPMLYGSQHEIEN 310

Query: 281 IYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
           I    G      V G  C   D F        ++  D ++F++   Y  +  + +N    
Sbjct: 311 ISNPNGRERFYSVVGYICET-DTFANNRRIAEIRENDILAFKNAGAYCYSMASNYNSRYR 369

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365
           P   + +        +  +++D   N
Sbjct: 370 PAEVLWHNGEAHLIRKRETFDDILRN 395


>gi|228470071|ref|ZP_04054980.1| carboxynorspermidine decarboxylase [Porphyromonas uenonis 60-3]
 gi|228308209|gb|EEK17064.1| carboxynorspermidine decarboxylase [Porphyromonas uenonis 60-3]
          Length = 388

 Score =  222 bits (566), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 113/380 (29%), Positives = 194/380 (51%), Gaps = 16/380 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TPYYL+++  L  NL+    + + AGV+++LA K +A W  F    +Y+  +T+SS +
Sbjct: 9   ITTPYYLLEESLLRRNLELIRSVAERAGVEIILAFKAYALWRTFPIFKEYIHASTASSPW 68

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IG 119
           E  LG+E+ G   HAY  AY +  I   +     I  N+ +Q  +F   +    +    G
Sbjct: 69  EARLGYEEMGAPVHAYTPAYSEENIADFVRYSSHITLNSPTQWQRFGPASPYAAEHISYG 128

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLMFHNNCENKSFLCF 175
           LR+N + S  K  + +P  P +R G   +   + E +     + G+  H  CE       
Sbjct: 129 LRLNLAYSPVKTEIYNPALPGTRFGVSAETLQQMEQEGALIGLEGVHLHVLCE-GDDEQL 187

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPG 234
             +L+ +E+ FG  + +++W++LGGG   T ++Y  +     L+ F E++S  +I +EPG
Sbjct: 188 ELVLERLEERFGFILDKVQWLNLGGGHLMTHREYDTEHLVVLLRAFRERHSNLRIIMEPG 247

Query: 235 EAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESA-------TIYPNTG 286
            A    T  L   V+DI  N      I++ S   H+PD L                P  G
Sbjct: 248 SAFAWQTGDLYAQVVDIVTNDGIKTAIMNVSFACHMPDCLEMPYHPVVEGATQCDTPEPG 307

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
            ++  + G SCL+GD  G + F+ P++IG+ +  +D+  Y   + N FNG+  P IA+++
Sbjct: 308 THSYRLGGNSCLSGDYMGYWTFDHPLEIGETLVLKDMLHYTTVKTNMFNGVQHPAIALRH 367

Query: 347 VDGTIKAIREFSYNDYYNNL 366
           +DG+++ +R F Y+DY + +
Sbjct: 368 LDGSVETLRSFDYSDYKSRM 387


>gi|163793816|ref|ZP_02187790.1| D-3-phosphoglycerate dehydrogenase [alpha proteobacterium BAL199]
 gi|159180927|gb|EDP65444.1| D-3-phosphoglycerate dehydrogenase [alpha proteobacterium BAL199]
          Length = 420

 Score =  222 bits (566), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 52/386 (13%), Positives = 114/386 (29%), Gaps = 23/386 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+     +              G+ +  A+K  +   +   L     G    S  
Sbjct: 25  VGTPAYVYSAGAIRTRYRALAAALDPLGIAIHYAVKANSNQAIITLLRGLGAGADVVSGG 84

Query: 62  EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E+          +   +      +D    A+ +        +  +L    + A+      
Sbjct: 85  ELARALAAGIPADRIVFAGVGKTRDEMAAALDAGIHLFNIESEPELETLAEVARSKGTTA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCEN 169
           ++GLR+NP+V           +  ++ G   +          E       GL  H   + 
Sbjct: 145 RVGLRVNPNVDAKTHAKITTGKAENKFGVPIERAPAFFARAGELSGVEAVGLSVHIGSQI 204

Query: 170 KSFLCFSAMLKNIEKEF------GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223
                +      + +        G+ +  ++     G  +  ++    +     +KE   
Sbjct: 205 LDLEPYRQTYVRVREMALTLRAQGYGLRNLDLGGGLGIGYRGEEGPDPQGLAAIIKEQLG 264

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES---- 278
               ++ +EPG  +V     L   V+ + +   K  V+VD+++   +   L         
Sbjct: 265 DLDFELAVEPGRWLVGAAGVLLARVILVKQGETKRHVVVDAAMNDLIRPTLYEGFHRIEP 324

Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
                      A + G  C +GD   +      V  G+ +   D   Y     + +N   
Sbjct: 325 VVGRDRADAGMADIVGPICESGDYLAKDRPLPAVAAGELLVVRDAGAYGAVMSSTYNARP 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364
           +    + + D         S +    
Sbjct: 385 LAPEVLVDGDRWTVIRPRQSVDALIA 410


>gi|254387531|ref|ZP_05002770.1| diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC
           27064]
 gi|294815081|ref|ZP_06773724.1| Diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC
           27064]
 gi|326443444|ref|ZP_08218178.1| diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC
           27064]
 gi|197701257|gb|EDY47069.1| diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC
           27064]
 gi|294327680|gb|EFG09323.1| Diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC
           27064]
          Length = 463

 Score =  222 bits (566), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 62/398 (15%), Positives = 124/398 (31%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+                 G  +  A K F +  +   L++        S  E
Sbjct: 63  GTPAYILDEDDFRARCRAWADAF-GPGADVFYAGKAFLSRAVVRWLHEEGLNLDVCSGGE 121

Query: 63  VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           ++         +  A++   K  +    AV +    I+ ++  ++ +    AQ L   ++
Sbjct: 122 LLTALDAGMPADRIAFHGNNKSLEEIERAVRAGVGRIVLDSFQEIARVAHVAQGLGVRQR 181

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + +RI   V               + G            +  +  +   + GL  H   +
Sbjct: 182 VLIRITVGVEAHTHEFIATAHEDQKFGLPLAGGQAAEGVRRALGLDGLELIGLHSHIGSQ 241

Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F          +++       ++  I LGGG+             + + +   +
Sbjct: 242 IFDTSGFEVAAHRVVGLLQQVRDEHGVELPEIDLGGGLGIAYTPDDDPREPRHIAKALHE 301

Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271
                         +I +EPG AIV  T      V  I      +  V VD  +  ++  
Sbjct: 302 IVTRECENAGLRPPRISVEPGRAIVGPTAFTLYEVGTIKPLPGLRTYVSVDGGMSDNIRT 361

Query: 272 YLLYQESAT----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326
            L   E +        +  P  + V G+ C +GDI  +  F    +  GD ++      Y
Sbjct: 362 ALYDAEYSVSLVSRVSDAAPMLSRVVGKHCESGDIVVKDAFLPADLAPGDLLAVPATGAY 421

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N    P +           +R  +  D   
Sbjct: 422 CRSMASNYNHALRPPVVAVRDGAARVIVRRETEEDLLR 459


>gi|170742956|ref|YP_001771611.1| diaminopimelate decarboxylase [Methylobacterium sp. 4-46]
 gi|168197230|gb|ACA19177.1| diaminopimelate decarboxylase [Methylobacterium sp. 4-46]
          Length = 423

 Score =  222 bits (566), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 57/388 (14%), Positives = 111/388 (28%), Gaps = 26/388 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +              +  A+K  +   +  +L +   G    S  
Sbjct: 25  VGTPFYCYASATLERHFRVFAEAFAGDDPLVCFAVKANSNQAVLASLARLGAGMDIVSEG 84

Query: 62  EVMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHK 116
           E+         GE   ++     +     A+ +        +  +L    + A+      
Sbjct: 85  ELRRALAAGVPGERIVFSGVAKTRAEMAVALDAGILCFNVESEPELEALSEVARARGQTA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
            + +R+NP V           +  ++ G       E   +        V G+  H   + 
Sbjct: 145 PVSIRVNPDVDARTHAKISTGKSENKFGIPISRAREVYARAAALPGLAVAGVDMHIGSQI 204

Query: 170 KSFLCFSAML---KNIEKEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221
                +         + ++      ++  I  GGG+                F   ++  
Sbjct: 205 TDLAPYDNAASLLAELARDLMAAGHRLHHIDFGGGLGIPYRDDNAPPPDPAAFAAVIRPH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280
                ++   E G  I  N   L T V+ + E   ++ VIVD+ +   +   L     A 
Sbjct: 265 FRPLGLRPVFEIGRMIAGNAGILVTRVVYVKEGEGRSFVIVDAGMNDLIRPTLYEAYHAL 324

Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                        TA V G  C +GD          V  GD ++      Y   +   +N
Sbjct: 325 RPVRQPDPEAPRLTADVVGPVCESGDYLALGREMPAVAPGDLLAVMSAGAYGAVQAGTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY 363
              +    +             SY +  
Sbjct: 385 TRRLVPEVLVRGAAHAVVRPRQSYEELI 412


>gi|307352865|ref|YP_003893916.1| diaminopimelate decarboxylase [Methanoplanus petrolearius DSM
           11571]
 gi|307156098|gb|ADN35478.1| diaminopimelate decarboxylase [Methanoplanus petrolearius DSM
           11571]
          Length = 431

 Score =  222 bits (566), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 66/395 (16%), Positives = 132/395 (33%), Gaps = 31/395 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++++  N        +     V+LL A K      +   L +   G    S 
Sbjct: 29  GTPCYVSDEERIRQNFLRYNSALREYYNDVQLLYAAKANGNLSVMRVLAKMGAGADVFSS 88

Query: 61  YEVMLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
            E+ L        E   +N  +    +++  +     +  ++  +L +  + A++     
Sbjct: 89  GELHLALLAGMPPEKLLFNGSSKTTEDLELAVDKGVRVSLDSFDELRQLSEVAKRKGKEV 148

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCEN 169
           ++  RINP++              S+ G      +++    +        G+  H   + 
Sbjct: 149 EVSFRINPALEVPTHPKIATGLATSKFGIPAGQILDAYKAAMEADNVTPVGMHCHIGSQI 208

Query: 170 KSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221
                F    + +    G       ++ +I +GGG+         K      + + +   
Sbjct: 209 LDVAPFGKAAEVMVDLAGKITDLGVRLAFIDIGGGLGIPYNRETDKMPTPEEYAKAVMPV 268

Query: 222 SEK------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY 275
             K         Q+++EPG  +V ++T L T V  + +  KN V VD+     +   +  
Sbjct: 269 FLKGIEKLGIKAQLWVEPGRYLVGDSTILLTKVNSVKKAHKNFVNVDAGFNLLIRPAMYD 328

Query: 276 QESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                +  N        T  V G  C  GDI         V   D ++  D   Y  +  
Sbjct: 329 AYHEVVVANRADEAPVETYTVTGPICETGDILAADRKLPVVADSDIMAVLDAGAYGYSMA 388

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366
           + +N        +   + +    R  S  D  N +
Sbjct: 389 SQYNSRPRCMEVMVKGEKSAPMRRRESIIDIINTM 423


>gi|307243459|ref|ZP_07525615.1| diaminopimelate decarboxylase [Peptostreptococcus stomatis DSM
           17678]
 gi|306493183|gb|EFM65180.1| diaminopimelate decarboxylase [Peptostreptococcus stomatis DSM
           17678]
          Length = 431

 Score =  222 bits (566), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 63/400 (15%), Positives = 127/400 (31%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P ++ D+  + +       +   +G    +  A K F    +   + +   G    S+
Sbjct: 30  GSPLFVYDEGLIRDQCRRFHKVLSKSGLDYHISYASKAFICKELVRIMKEEDMGLDVVSV 89

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F  +    +   K       A+ SN    + ++++++ +    A      
Sbjct: 90  GELYNALSVDFDSQKIHLHGNNKTEYEIGYALESNIGCFVVDSLAEVERIDRIAGEMGKR 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
            K  LR+ P V              S+ G    +          + +E  ++ GL FH  
Sbjct: 150 AKALLRVTPGVEAHTHEFITTGNTDSKFGLNIDNGQAREGVEAILRAENIDLIGLHFHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEW----ISLGGGIHFTDKDYPVKDFCQ----RL 218
            +        A +K +          +++    +++GGG      D  V    +     +
Sbjct: 210 SQIFGTEGSQAAIKKVFVWLKDLKEDLDFEAKILNIGGGFGIRYTDEDVSYPIEDALEEI 269

Query: 219 KEFSEKY-------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               ++          Q++LEPG +IV         V  I E       V     +  H+
Sbjct: 270 IACLKESARSQGLAIPQLWLEPGRSIVGEAGYTLYRVGTIKEIPGVRTYVSIDGGMTDHI 329

Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +      N           + G+ C +GD+  +       KIGD +       
Sbjct: 330 RTALYGAKYEVALANRMNEEDASLVTIAGKCCESGDLIAKDVRIPEAKIGDILVVACTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y+ +  + +N +  P +           I+  S  D   N
Sbjct: 390 YHYSMASNYNLMQKPAVVFVGDGKDKIVIKRESLEDLIKN 429


>gi|158312466|ref|YP_001504974.1| diaminopimelate decarboxylase [Frankia sp. EAN1pec]
 gi|158107871|gb|ABW10068.1| diaminopimelate decarboxylase [Frankia sp. EAN1pec]
          Length = 437

 Score =  222 bits (566), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 53/401 (13%), Positives = 104/401 (25%), Gaps = 39/401 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+     L+++        ++    +  + K  +   +   L     G  + S  E
Sbjct: 26  GTPTYVYSAATLVDHYVRFAKAFESINPLICFSAKALSNVHLLRLLAGQGAGIDTVSGGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +          E        K  D    AV  +   I   + +++      A++  ++  
Sbjct: 86  LHRALVAGVDPERIVLAGVGKSVDELRAAVRHDIRCINVESEAEVELLARVAREEDRRPR 145

Query: 120 LRINPSVS----YSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCE 168
           L I  +                   ++ G   +            E     G   H    
Sbjct: 146 LAIRVNPDIAPDMRTPARTTTAIRGAKFGVDIERAAALFRAASTDEFLRAEGFHVHIGSP 205

Query: 169 NKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLK 219
                 ++  L  I             +  +++GGG                 +      
Sbjct: 206 IFDPRVYATALDRILALTAGLEADGHSVTTLNVGGGFPAEYTEGSAPGWDDFAEAICPRL 265

Query: 220 EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA 279
           +       Q+  EPG  I  N   L  TV          ++V  +   H+    +Y    
Sbjct: 266 QGFVDRGGQVVFEPGRTIAANAGILLATVRYRKRAGDRELVVIDAGMTHIVRAAMYDSYH 325

Query: 280 TIYP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323
            ++P                        V G  C + D   +      +  GD I+    
Sbjct: 326 FMWPVTPVNGTVPRSRDQQSIDDLVDYDVVGPICESSDYLAKGRALPAMVSGDLIAIFSA 385

Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             Y +   + +N    P   +          R  +Y+D   
Sbjct: 386 GAYGMTMTSNYNSQLRPAEVLVRGGRADLIRRRETYDDLVA 426


>gi|319409426|emb|CBI83072.1| Diaminopimelate decarboxylase [Bartonella schoenbuchensis R1]
          Length = 424

 Score =  222 bits (566), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 63/388 (16%), Positives = 113/388 (29%), Gaps = 26/388 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L+ +         +    +  A+K  +   +   L     G    S  
Sbjct: 25  VGTPFYCYSANALVTHFQDYQNAFHDIASLIAYAVKANSNQAILRLLAHNGAGADVVSEG 84

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118
           E+              Y    K           D       +  +L +   +A  L K  
Sbjct: 85  ELRRALAVGIPAHRIVYAGVGKTVREIDFALAHDICCFNVESEQELEQLSARAVALSKNA 144

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCEN 169
              LR+ P V           +  ++ G          K   +     V G+  H   + 
Sbjct: 145 RISLRLTPDVDAKTHQKITTGKSENKFGIPLALAYDAYKKAAQLPGLQVCGVAMHIGSQI 204

Query: 170 ---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV-----KDFCQRLKEF 221
              K F     +  +  +   +    I  + +GGG+  +            D+   +K+ 
Sbjct: 205 CDLKPFEEAFIIAADFVRHLRNDGYAITHVDIGGGLGVSYGRESCLVPSPFDYAALVKKH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                + + LEPG +IV N   L T+V+       +N VIVD+++   +   L       
Sbjct: 265 IAPLGITVILEPGRSIVGNAGVLITSVVYFKRGKGRNFVIVDAAMNDFMRPTLYDAWHDV 324

Query: 281 IYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           I     P       A + G  C  GD          ++ GD ++      Y     N +N
Sbjct: 325 IPVKKTPLNGMMINADIVGPVCETGDYLALDRCLPVLEAGDLLAITGAGAYGAVMANTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY 363
              +    +              Y    
Sbjct: 385 SRLLAPEVLVQDTRYAVVRPRLDYAQLI 412


>gi|69244870|ref|ZP_00603094.1| Diaminopimelate decarboxylase [Enterococcus faecium DO]
 gi|257879077|ref|ZP_05658730.1| diaminopimelate decarboxylase [Enterococcus faecium 1,230,933]
 gi|257882115|ref|ZP_05661768.1| diaminopimelate decarboxylase [Enterococcus faecium 1,231,502]
 gi|257889908|ref|ZP_05669561.1| diaminopimelate decarboxylase [Enterococcus faecium 1,231,410]
 gi|258615457|ref|ZP_05713227.1| diaminopimelate decarboxylase [Enterococcus faecium DO]
 gi|260562743|ref|ZP_05833238.1| diaminopimelate decarboxylase [Enterococcus faecium C68]
 gi|293556549|ref|ZP_06675119.1| diaminopimelate decarboxylase [Enterococcus faecium E1039]
 gi|293563574|ref|ZP_06678022.1| diaminopimelate decarboxylase [Enterococcus faecium E1162]
 gi|293567982|ref|ZP_06679321.1| diaminopimelate decarboxylase [Enterococcus faecium E1071]
 gi|294622605|ref|ZP_06701602.1| diaminopimelate decarboxylase [Enterococcus faecium U0317]
 gi|314947848|ref|ZP_07851255.1| diaminopimelate decarboxylase [Enterococcus faecium TX0082]
 gi|68196224|gb|EAN10654.1| Diaminopimelate decarboxylase [Enterococcus faecium DO]
 gi|257813305|gb|EEV42063.1| diaminopimelate decarboxylase [Enterococcus faecium 1,230,933]
 gi|257817773|gb|EEV45101.1| diaminopimelate decarboxylase [Enterococcus faecium 1,231,502]
 gi|257826268|gb|EEV52894.1| diaminopimelate decarboxylase [Enterococcus faecium 1,231,410]
 gi|260072902|gb|EEW61262.1| diaminopimelate decarboxylase [Enterococcus faecium C68]
 gi|291589305|gb|EFF21114.1| diaminopimelate decarboxylase [Enterococcus faecium E1071]
 gi|291597910|gb|EFF29035.1| diaminopimelate decarboxylase [Enterococcus faecium U0317]
 gi|291601294|gb|EFF31576.1| diaminopimelate decarboxylase [Enterococcus faecium E1039]
 gi|291604576|gb|EFF34062.1| diaminopimelate decarboxylase [Enterococcus faecium E1162]
 gi|313645828|gb|EFS10408.1| diaminopimelate decarboxylase [Enterococcus faecium TX0082]
          Length = 419

 Score =  222 bits (566), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 66/394 (16%), Positives = 131/394 (33%), Gaps = 33/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           KTP Y+ D++K+   + +       K    K+L A K F    M   + +Y  G    S 
Sbjct: 19  KTPLYVYDEEKMRQTMLSFKRGFVSKRFDTKVLYASKAFQTIEMLHLVREYGFGLDVVSG 78

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKK 117
            E+    +  F  +T  ++   K  E        D   I+ + + ++    + +Q+  KK
Sbjct: 79  GEIYTALQADFPRDTIYFHGNNKTPEELIYALENDLLHIVADNLMEVELLAELSQRYLKK 138

Query: 118 IGLRINPSVS--YSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
           I + +  +V                S+ G   +            ES    + G   H  
Sbjct: 139 ICIMLRLNVGVEAHTHEYIVTAHIDSKFGMSYESKECQQALQLIKESSYLELEGFHAHIG 198

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226
            +      + A +  +      F   +  ++LGGG              +   +   +Y+
Sbjct: 199 SQIFDVTAWLAEIDKLTNYLTDFDQPLS-LNLGGGFGIRYTQNDQPIPVEEALKKLIEYT 257

Query: 227 -----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL 274
                       Q+ +EPG +IV    T   T+  I +         D  +  ++   L 
Sbjct: 258 EEALEKRKLTIRQLLIEPGRSIVGEAGTTLYTIGFIKKTPHKKYYFVDGGMTDNIRPALY 317

Query: 275 YQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
             E     A            + G+ C +GD+  +  +    + GD ++      Y  + 
Sbjct: 318 QAEYDCDLAAKLSEEKTEKVTIAGKMCESGDVVIKEAYLPKAESGDLLAVYSTGAYGYSM 377

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            + +N    P +   N   +   +R  +++D   
Sbjct: 378 SSNYNRATRPAVVFVNNGQSRLIVRRQAFSDLLR 411


>gi|317010302|gb|ADU84049.1| carboxynorspermidine decarboxylase [Helicobacter pylori
           SouthAfrica7]
          Length = 405

 Score =  222 bits (566), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 137/400 (34%), Positives = 213/400 (53%), Gaps = 38/400 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y+++ ++L  N +    +R+ +G K+LLALK +A W  F  L + ++G  +S LY
Sbjct: 7   IPTPCYVLESERLEKNANILEIVRQQSGAKILLALKGYAFWREFGILRKKLNGCCASGLY 66

Query: 62  EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112
           E  L  E+FGG     E   Y+ A+K+ EI+A+L    ++IFN+  Q     ++  DK +
Sbjct: 67  EAKLAFEEFGGRESQKEICVYSPAFKEAEINAILPLATSVIFNSFYQYTTYKDRILDKNK 126

Query: 113 KL------HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162
           +L        K+GLRINP  S     + +P    SRLG    +  +   ++    VNGL 
Sbjct: 127 QLEKLGLSPIKMGLRINPLYSEVTPAIYNPCTKTSRLGIAPSEFEKGVKEHGLEGVNGLH 186

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
           FH +CE          L+++E+ F  ++  +EW++ GGG H T  DY V    Q +K+F 
Sbjct: 187 FHTHCEQN-ADALCRTLEHVERHFKPYLEGMEWVNFGGGHHITRSDYDVNLLIQTIKDFK 245

Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
           E+Y   ++ LEPGEAI      L  +V+DI +N + + I+D+S  AH+PD L      +I
Sbjct: 246 ERYHNIEVVLEPGEAIGWQCGFLIASVIDIVKNGQEIAILDASFSAHMPDCLEMPYRPSI 305

Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
                             N G ++  + G +CLAGD  G F F+ P+K GD+I F+D+  
Sbjct: 306 LKISIENDEELIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFDTPLKRGDKILFKDMLH 365

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y I + N FNG+ +P++A  +  G  K ++ FSY DY N 
Sbjct: 366 YTIVKNNSFNGVPLPSLAKIDEQG-FKILKNFSYEDYKNR 404


>gi|317178327|dbj|BAJ56115.1| carboxynorspermidine decarboxylase [Helicobacter pylori F30]
          Length = 405

 Score =  222 bits (566), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 139/400 (34%), Positives = 211/400 (52%), Gaps = 38/400 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y+++ ++L  N      +R+ +G K+LLALK +A W  F  L Q ++G  +S LY
Sbjct: 7   IPTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66

Query: 62  EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112
           E  L  E+FGG     E   Y  A+K+ E+ A+L    +IIFN+  Q     ++  DK +
Sbjct: 67  EAKLAFEEFGGRESHKEICVYGPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNK 126

Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162
           +L        K+GLRINP  S     + +P    SRLG    +  +   ++    V+GL 
Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKVSRLGIVPSEFEKGVKEHGLEGVSGLH 186

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
           FH +CE          L+++EK F  ++  +EW++ GGG H T  DY V    Q +K+F 
Sbjct: 187 FHTHCEQN-ADALCRTLEHVEKHFKPYLENMEWVNFGGGHHITRSDYDVNLLIQTIKDFK 245

Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
           E+Y   ++ LEPGEAI      L T+V+DI +N + + I+D+S  AH+PD L      +I
Sbjct: 246 ERYHNIEVILEPGEAIGWQCGFLITSVIDIVKNDQEIAILDASFSAHMPDCLEMPYRPSI 305

Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
                             N G ++  + G +CLAGD  G F F+ P+K GD+I F+D+  
Sbjct: 306 LKISVENDEELVEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFDVPLKRGDKIVFQDMLH 365

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y I + N FNG+ +P++A  +  G  K ++ FSY DY N 
Sbjct: 366 YTIVKNNSFNGVPLPSLARLDQQG-FKILKNFSYEDYKNR 404


>gi|71083118|ref|YP_265837.1| diaminopimelate decarboxylase [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|71062231|gb|AAZ21234.1| Diaminopimelate decarboxylase [Candidatus Pelagibacter ubique
           HTCC1062]
          Length = 404

 Score =  222 bits (566), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 68/382 (17%), Positives = 132/382 (34%), Gaps = 21/382 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y    ++L  N+        +    +  A+K      +   + +   G    S+ E
Sbjct: 23  GTPTYCYSHKRLTENIKNFKKNFSSFSPLICFAVKSNTNVNLIREIRKLGLGADVVSMGE 82

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--K 117
           +M+        +   ++   K  +  +   +     I   + S++ + +  A+   K   
Sbjct: 83  LMMALKAGIDPKKIVFSGVGKTSKEISYAIDKKILLINAESKSEIIEIEKIAKSKKKIVN 142

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170
           IG+R+NP+            +  ++ G   K           S+  N+  L  H   +  
Sbjct: 143 IGIRLNPNTDAKTLKQISTGKKENKFGVDEKTFFELVNFTNHSKNINLKCLSVHIGSQIL 202

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSEKYS 226
               +  ML  + K         E+I LGGG+  + +        + +   +++F +   
Sbjct: 203 DHKPYEKMLSVVNKIIKKSGHIFEFIDLGGGMGISYEKNSKKLNYQKYNTAIQKFLKGQK 262

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT 285
            +I  EPG +IV N   L + V+ I EN K   I+ D+++   +   L      TI    
Sbjct: 263 TKIIFEPGRSIVGNIGFLISQVIYIKENTKKDFIILDAAMNDLMRPALYGANHQTIPVVK 322

Query: 286 GP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                  T    G  C + D F      + +K  D +   DV  Y ++  + +N    P 
Sbjct: 323 NNRISNKTYEFVGPICESTDKFTTIKGFQKLKEKDLVLMCDVGAYGMSLSSNYNVRPKPA 382

Query: 342 IAVKNVDGTIKAIREFSYNDYY 363
             +          +     D  
Sbjct: 383 ELIIKGSKINIIKKRQKLKDLI 404


>gi|304320595|ref|YP_003854238.1| Orn/DAP/Arg decarboxylase, family 2 [Parvularcula bermudensis
           HTCC2503]
 gi|303299497|gb|ADM09096.1| Orn/DAP/Arg decarboxylase, family 2 [Parvularcula bermudensis
           HTCC2503]
          Length = 419

 Score =  222 bits (566), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 65/387 (16%), Positives = 116/387 (29%), Gaps = 24/387 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+     L  + D      KN    +  A+K  +   +   L +   G    S  
Sbjct: 25  VGTPLYIYSAATLRRHYDILADEFKNRDALIAFAVKALSNIAVLALLGRRGAGADIVSGG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK----LHK 116
           E+          E   ++   K         N   + FN  S+       A         
Sbjct: 85  ELYRALKAGIPAERVVFSGVAKSRGEMEAALNAGILQFNVESEAELAHLSAVASALGKTA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            + LR+NP V           R   + G    D                 GL  H   + 
Sbjct: 145 PVALRVNPDVDAGTDTRISTGRKDDKFGVPFADAGRLYRLAAALPGLRPQGLTVHIGSQI 204

Query: 170 KSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221
            S   F      +            ++  + LGGG+    +          D+   L   
Sbjct: 205 TSVAPFERAAARVGGLVTSLRAEGHEVTHLDLGGGLGIPYERAAAAPPLPVDYAATLNRA 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTT-VLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280
           +   +V++ LEPG  I  N     T  VL  ++   +  +VD ++   +   L       
Sbjct: 265 TADLNVRLILEPGRLIAGNAGLFVTRIVLTKNQEGTHYALVDGAMNDLIRPALYGARHEV 324

Query: 281 IYPNTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
           +        P    + G  C + D+F +      V  G  ++F     Y   + + +N  
Sbjct: 325 MEDTPPTGVPVHHHIAGPVCESTDLFAKDVPLHEVSAGALLAFRTAGAYGAVQASQYNTR 384

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
            +    + + D      R  +Y +  +
Sbjct: 385 PLVPEVLVDGDRFTVIRRRPTYEEMLS 411


>gi|223939745|ref|ZP_03631617.1| diaminopimelate decarboxylase [bacterium Ellin514]
 gi|223891616|gb|EEF58105.1| diaminopimelate decarboxylase [bacterium Ellin514]
          Length = 432

 Score =  222 bits (566), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 60/396 (15%), Positives = 119/396 (30%), Gaps = 36/396 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+  ++ L  +              +  ALK  +   +  TL     G    S  E
Sbjct: 26  GSPLYIYSQRTLTEHFQKLDQALAPVDHLICFALKSNSNQAVLRTLADLGGGFDIVSSGE 85

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +              +    K              +    +  +L +    A +L K   
Sbjct: 86  LQRAIAAGADPRKCVFAGVGKTESEIEFALKKGVYSFNVESEPELQRINRIAGRLKKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170
           I +R+NP+V              ++ G   ++         + +   + GL  H   +  
Sbjct: 146 IAVRVNPNVDAHTHAKITTGTYDNKFGIAIENIEGVYARASKLKNIKLRGLQMHIGSQLT 205

Query: 171 SFLCFSAMLKNIEKEFG--HFITQIEWISLGGGIHFTDKD------------------YP 210
           S   F   +K +            +E+ S+GGG+                          
Sbjct: 206 SVEPFEQAVKKVSPLVERLKKKHGLEFFSIGGGLGIVYDPALESSNPEWWRTTKGKKILT 265

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHV 269
              +  RL    +   ++I +EPG  I  N   L T +  +     KN +IVD+++   +
Sbjct: 266 PTLYATRLVPLLKPLGLRILMEPGRFISGNAGILVTRIEYVKRTGKKNFLIVDAAMNDLI 325

Query: 270 PDYLLYQESATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
                      +          ++ V G  C +GD F +      +  GD ++      Y
Sbjct: 326 RPAFYDAYHEIVPLTRKNGQLISSDVVGPICESGDFFAKDRPLPKLGEGDHLALLSAGAY 385

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
                + +N  +M    + N + +          + 
Sbjct: 386 GFVMASNYNTRSMAAEVLVNGNKSALVRERQPVEEI 421


>gi|114799974|ref|YP_762135.1| diaminopimelate decarboxylase [Hyphomonas neptunium ATCC 15444]
 gi|114740148|gb|ABI78273.1| diaminopimelate decarboxylase [Hyphomonas neptunium ATCC 15444]
          Length = 424

 Score =  222 bits (566), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 59/386 (15%), Positives = 109/386 (28%), Gaps = 25/386 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+     L  +         +  V +  ++K      +  TL     G    S  
Sbjct: 25  VGTPVYVYSTATLERHARVIAEAFSSQKVLIAYSVKANGNLAVLATLAAEGCGADVVSGG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E+              ++   K       A+ +        +  +L      A  L    
Sbjct: 85  EMQRAMKAGIPAARIVFSGVGKTAAEMKLALEAGIHQFNVESAGELRLLSRVASGLGLKA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCEN 169
            I LR+NP V+          +   + G           +  +     V G+  H   + 
Sbjct: 145 PIALRVNPDVAAGGHPNISTGKSGDKFGVPWGEAEALYAEAGKLPGIQVVGVDVHIGSQI 204

Query: 170 KSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-- 224
                  A  + +             I  I +GGG+    ++               +  
Sbjct: 205 GELGPMRAAFEKVVALALRLRGQGHDIRRIDVGGGLGIPYRETDAPAPPSAYAAMIAEVT 264

Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
             +  ++ LEPG  I  N   L TT L       +  +I+D+ +   +   L        
Sbjct: 265 AGHGFEVILEPGRVIAGNAGVLLTTALYEKEAPDRTFLIIDAGMNDLIRPALYGAHHDIR 324

Query: 282 YPNT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
             +            V G  C + D F        V  GDR++F     Y     + +N 
Sbjct: 325 PLDEPAQDAAEKVYDVVGPICESTDKFATARTLPKVTPGDRLAFMSAGAYGAVLSSAYNA 384

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDY 362
             +    + + D      R   + + 
Sbjct: 385 RPLVPEVLVSGDRYSIVRRRPDFEEM 410


>gi|315172370|gb|EFU16387.1| diaminopimelate decarboxylase [Enterococcus faecalis TX1346]
          Length = 436

 Score =  222 bits (565), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 60/397 (15%), Positives = 129/397 (32%), Gaps = 37/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP ++ D   +              G+K  ++ A K F+   ++  L +        S 
Sbjct: 35  GTPLFVYDVAHIRVQARGFKQTLNQLGIKNKVVYASKAFSCLAIYQVLKEEDIACDVVSG 94

Query: 61  YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDK--AQKLH 115
            E+    +      E   +       E+   L N   TI+ +   +++  ++    +   
Sbjct: 95  GELFTALKGGMEPAEIEFHGNNKTPEELRYALDNKIGTIVIDNFYEIDLLEELLATRNQT 154

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           +K+  R++P V           +  S+ G         E     + +   +V G+  H  
Sbjct: 155 QKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASGQATEALVRLLSNPSFDVQGVHCHIG 214

Query: 167 CENKSFLCFSAMLKNIEKEFGHFI----TQIEWISLGGGIHFTDKDYPVK----DFCQRL 218
            +  +   F A ++ +      +          +++GGG                F +++
Sbjct: 215 SQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLNMGGGFGVQYTQQDEPLAPATFVEKI 274

Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
               + +         ++++EPG +++    T   TV    E    ++ V VD  +  ++
Sbjct: 275 VYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIYTVGAQKEVPGVRHFVSVDGGMGDNI 334

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L         A    +       V G+ C +GD+         VK GD ++      
Sbjct: 335 RPALYQAVYDGFLANREGHDSVKKVTVVGKYCESGDVLLRDILLPEVKAGDLLAISSTGA 394

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
           Y  +  + +N    P +            R  +Y D 
Sbjct: 395 YGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYEDM 431


>gi|289422579|ref|ZP_06424422.1| diaminopimelate decarboxylase [Peptostreptococcus anaerobius 653-L]
 gi|289157151|gb|EFD05773.1| diaminopimelate decarboxylase [Peptostreptococcus anaerobius 653-L]
          Length = 431

 Score =  222 bits (565), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 61/399 (15%), Positives = 124/399 (31%), Gaps = 37/399 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +P ++ D+  + N       + + +G    +  A K F    +   + +   G    S  
Sbjct: 31  SPLFVYDEDLVTNQCRRFHSVLEGSGLDYHISYASKAFICKYLVGIMAEENMGLDVVSAG 90

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKA--QKLHK 116
           E+       F  +    +   K           D    + ++  ++ +    A       
Sbjct: 91  ELYNALSAGFDPQKIHLHGNNKTDFEIEYALKEDIGCFVIDSFDEVKRLNQIAGQMSKKP 150

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNC 167
           +  LR+ P V              S+ G             D +++E  ++ G+ FH   
Sbjct: 151 RCLLRVTPGVEAHTHEYISTGSTDSKFGLNIDNGQAFKGVADILQAENLDLIGIHFHIGS 210

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEW----ISLGGGIHFTDKDYPVKDFCQ----RLK 219
           +          +  +   F      +++    +++GGG      D  +    +     + 
Sbjct: 211 QIFGTEGTRMAVDKVFGWFAKLKKDLDYTPSVLNIGGGFGIRYTDEDLSYPIETALDEII 270

Query: 220 EFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVP 270
              +  S        Q++LEPG +IV    T    +  I E       V     +  H+ 
Sbjct: 271 SCLKDSSKSNNLPIPQLWLEPGRSIVGEACTTLYRIGTIKEIPDVRTYVSVDGGMSDHIR 330

Query: 271 DYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
             L   +      N           + G+ C +GDI          +IGD  +      Y
Sbjct: 331 TALYQAKYEVALANKMTAPIFGLYTLAGKCCESGDIIAYDVKLPMPEIGDIAAVSCTGAY 390

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + +  + +N +  P +       +  AI+  S  D   N
Sbjct: 391 HYSMASNYNQMPRPAVVFVKNGTSKLAIKRESMEDLIKN 429


>gi|315224163|ref|ZP_07866003.1| diaminopimelate decarboxylase [Capnocytophaga ochracea F0287]
 gi|314945896|gb|EFS97905.1| diaminopimelate decarboxylase [Capnocytophaga ochracea F0287]
          Length = 398

 Score =  222 bits (565), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 58/385 (15%), Positives = 111/385 (28%), Gaps = 27/385 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            +P Y+ D QK+ +  +       +   +++  A+K  +   +   +     G  + S+ 
Sbjct: 14  GSPVYVYDAQKIASQYNRLTNAFASVPKLRINYAMKALSNISILKLMKDLGAGLDTVSIQ 73

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           EV LG    F  +   +       +  +  +     +  + +S L +F    Q     + 
Sbjct: 74  EVQLGLLAGFDPQQIIFTPNGVSMDEIEEAMRLGVQLNIDNLSFLEQFGT--QHPEIPVC 131

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFL 173
           +RINP V              S+ G                  ++NG+  H   +     
Sbjct: 132 IRINPHVMAGGNSNISVGHIDSKFGISIHQIPHILRIVENTKMHINGIHMHTGSDILDID 191

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
            F    + I  E       +++I  G G     K+  ++   + L E           E 
Sbjct: 192 VFLYAAE-ILFETAKHFKDLQFIDFGSGFKVPYKEGDIQTNIEELGERLSSRFADFCKEY 250

Query: 234 GE----------AIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLY--QESAT 280
           G            +V+        V  + +        VDS     +             
Sbjct: 251 GRNLTLAFEPGKFLVSEAGYFLVKVNVVKQTTSTVFAGVDSGFNHLIRPMFYGANHYIEN 310

Query: 281 IYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
           I    G      V G  C   D F        +  GD + F +   Y     + +N    
Sbjct: 311 ISNPEGKKRFYSVVGYICET-DTFASNRQIAEITEGDILCFHNAGAYCYTMASNYNSRLR 369

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
           P   +          +  ++ D   
Sbjct: 370 PAEVLWQNGEAKLIRKAETFEDLLR 394


>gi|300309533|ref|YP_003773625.1| diaminopimelate decarboxylase [Herbaspirillum seropedicae SmR1]
 gi|300072318|gb|ADJ61717.1| diaminopimelate decarboxylase protein [Herbaspirillum seropedicae
           SmR1]
          Length = 430

 Score =  222 bits (565), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 60/400 (15%), Positives = 120/400 (30%), Gaps = 39/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--------VKLLLALKCFAAWGMFDTLNQYMDG 54
            TP Y+  K  L+ N        + AG          +  ++K  +   + + L +   G
Sbjct: 26  GTPLYVYSKAALVENFSAYANACQQAGRADGGKGGALVCYSVKSNSNLAVLNLLGRLGSG 85

Query: 55  TTSSSLYEV-MLGHEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA 111
               S  E+  +           ++     +D    A+  +       ++ ++ +  + A
Sbjct: 86  FDIVSGGELLRVVAAGGDARKVIFSGVGKGRDEMKLALEHDILCFNVESIPEVARLNEVA 145

Query: 112 QKLHKKIG--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLM 162
             L K+    LR+NP+V              ++ G   +D +             V G+ 
Sbjct: 146 GALGKRARISLRVNPNVDAKTHPYISTGLKENKFGVAYEDALNCYRAAAALPHIEVVGID 205

Query: 163 FHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK 219
            H   +          L    ++          I  + +GGGI     D         L 
Sbjct: 206 CHIGSQLLDDSPLLEALDKIIDMVDALEAEGIPIHHLDIGGGIGIRYDDEQPVAIGDYLA 265

Query: 220 EFSEK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEA 267
               +             +Q+  EPG ++V N   L T V  +     KN  +VD+++  
Sbjct: 266 RVFARVDAWRASKYQGRPIQVMFEPGRSVVGNAGLLLTEVQYLKHGEGKNFAVVDAAMND 325

Query: 268 HVPDYLLYQESATIYPNTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
            +   +                P    V G  C +GD          +  GD ++     
Sbjct: 326 LMRPAMYEAWHGVKTVKENAGQPRIYDVVGPVCESGDWLARSRELA-IGEGDLLALMSAG 384

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            Y +   + +N        + + +         +  D + 
Sbjct: 385 AYGMTMASNYNTRGRAAEVLVDGERAHLIRARENPADLFA 424


>gi|217034692|ref|ZP_03440095.1| hypothetical protein HP9810_880g3 [Helicobacter pylori 98-10]
 gi|216942832|gb|EEC22327.1| hypothetical protein HP9810_880g3 [Helicobacter pylori 98-10]
          Length = 405

 Score =  222 bits (565), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 138/400 (34%), Positives = 210/400 (52%), Gaps = 38/400 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y+++ ++L  N      +R+ +G K+LLALK +A W  F  L Q ++G  +S LY
Sbjct: 7   IPTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66

Query: 62  EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112
           E  L  E+FGG     E   Y+ A+K+ E+ A+L    +IIFN+  Q     ++  DK +
Sbjct: 67  EAKLAFEEFGGRESQKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNK 126

Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162
           +L        K+GLRINP  S     + +P    SRLG    +  +   ++    V+GL 
Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKVSRLGIVPSEFEKGVKEHGLEGVSGLH 186

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
           FH +CE          L+++EK F  ++  +EW++ GGG H T  DY V    Q +K+F 
Sbjct: 187 FHTHCEQN-ADALCRTLEHVEKHFKPYLENMEWVNFGGGHHITRSDYDVNLLIQTIKDFK 245

Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
           E+Y   ++ LEPGEAI      L  +V+DI +N + + I+D+S   H+PD L      +I
Sbjct: 246 ERYHNIEVVLEPGEAIGWQCGFLIASVIDIVQNDQEIAILDASFSVHMPDCLEMPYRPSI 305

Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
                             N G ++  + G +CLAGD  G F FE P+K GD+I F+D+  
Sbjct: 306 LKISVENGEELVEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFEAPLKRGDKIVFQDMLH 365

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y I + N FNG+ +P++A  +  G  K ++ FSY DY N 
Sbjct: 366 YTIVKNNSFNGVPLPSLARLDQQG-FKILKNFSYEDYKNR 404


>gi|313903676|ref|ZP_07837065.1| diaminopimelate decarboxylase [Thermaerobacter subterraneus DSM
           13965]
 gi|313465864|gb|EFR61389.1| diaminopimelate decarboxylase [Thermaerobacter subterraneus DSM
           13965]
          Length = 445

 Score =  222 bits (565), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 58/397 (14%), Positives = 120/397 (30%), Gaps = 36/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+  +             AGV +  A K      +   ++Q      + S  E
Sbjct: 38  GTPLYVLDEAVIRQRCRAYREAMGGAGV-IAYAAKALCTTAILRIMDQEGLWVDAVSAGE 96

Query: 63  VMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHKK 117
           +       F       +      +    A+ +    ++ +   +L++     +A      
Sbjct: 97  LHTALAAGFPAGRILLHGNNKSDEELRLAIETGVGRVVVDNFHELDRLAAMARAAGRSVP 156

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK--DKIESEIKNVN-------GLMFHNNCE 168
           + LR+ P V           +  S+ G        +E+  + ++       G   H   +
Sbjct: 157 VLLRVAPGVEAHTHEFIRTGQQESKFGFDLATGQVLEALDRVLDEPALDWHGFHCHIGSQ 216

Query: 169 NKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKE 220
             +   +      M+    +        +  + LGGG+                  R++ 
Sbjct: 217 ILAVEPWEQAARIMMDLAAEAHRRTGRFVRELDLGGGLGIRYVPGDEPPSIAETVTRIRT 276

Query: 221 FSEK-------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271
             E+          ++ LEPG +IV        TV  +      +  V     +  +   
Sbjct: 277 AVERAAGERGLPVPRLILEPGRSIVGEAGVTLYTVGSVKRVPGLMPYVAVDGGMADNPRY 336

Query: 272 YLLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
            L       +  N           + GR C +GDI         V+ GD ++      YN
Sbjct: 337 ALYRALYTAVLANRPLDEPAERVCLVGRYCESGDILIPEIELPRVEPGDVVAVFSTGAYN 396

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            +  + +N    P + +         +   +Y+D   
Sbjct: 397 YSMSSQYNRFPRPAMVLVREGEAAVIVERETYDDLLR 433


>gi|317181308|dbj|BAJ59092.1| carboxynorspermidine decarboxylase [Helicobacter pylori F57]
          Length = 405

 Score =  222 bits (565), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 138/400 (34%), Positives = 210/400 (52%), Gaps = 38/400 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y+++ ++L  N      +R+ +G K+LLALK +A W  F  L Q ++G  +S LY
Sbjct: 7   IPTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66

Query: 62  EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112
           E  L  E+FGG     E   Y+ A+K+ E+ A+L    +IIFN+  Q     ++  DK +
Sbjct: 67  EAKLAFEEFGGRESQKEICVYSPAFKETEMSAILPLATSIIFNSFYQYATYKDRILDKNK 126

Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162
           +L        K+GLRINP  S    ++ +P    SRLG       +   ++    V+GL 
Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPVIYNPCSKVSRLGITPSGFEKGVKEHGLEGVSGLH 186

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
           FH +CE          L+++EK F  ++  +EW++ GGG H T  DY V    Q +K+F 
Sbjct: 187 FHTHCEQN-ADALCRTLEHVEKHFKPYLENMEWVNFGGGHHITRSDYDVNLLIQTIKDFK 245

Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
           E+Y   ++ LEPGEAI      L  +V+DI +N + + I+D+S  AH+PD L       I
Sbjct: 246 ERYHNIEVVLEPGEAIGWQCGFLIASVIDIVKNDQEIAILDASFSAHMPDCLEMPYRPNI 305

Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
                             N G ++  + G +CLAGD  G F F+ P+K GD+I F+D+  
Sbjct: 306 LKISVENDEELVEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFDTPLKRGDKIVFQDMLH 365

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y I + N FNG+ +P++A  +  G  K ++ FSY DY N 
Sbjct: 366 YTIVKNNSFNGVPLPSLARLDQQG-FKILKNFSYEDYKNR 404


>gi|78357706|ref|YP_389155.1| diaminopimelate decarboxylase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78220111|gb|ABB39460.1| diaminopimelate decarboxylase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 434

 Score =  222 bits (565), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 55/390 (14%), Positives = 116/390 (29%), Gaps = 31/390 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+ ++  L         +  + G ++  + K  A   +   +        + S  E
Sbjct: 28  GSPLYVYNENVLRRRCRELKGLSSHPGFRVNYSAKANANLSLLRIIRSEGLVVDAMSPGE 87

Query: 63  -VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTII-FNTVSQLNKFKDKAQKLHKKIGL 120
             M     F  +   Y       E      +   ++  +++ QL+           K+ +
Sbjct: 88  IAMHLAAGFTPDEITYVCNNVSAEELRNAVDHGLLVSVDSLPQLDLLGQV--NPGGKVMI 145

Query: 121 RINPSVSYSKFILADPNRPFSRLGE------KCKDKIESEIKNVNGLMFHNNCENKSFLC 174
           RINP +              ++ G         +  ++     + GL  H          
Sbjct: 146 RINPGIGAGHHKKVVTGGKETKFGIGPDDGDAVRRILKRHNLTLAGLNQHIGSLFMEPDS 205

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEK---- 224
           +   ++ + +E   +   +E I  GGG     + Y       ++   + L +   +    
Sbjct: 206 YMEAVEFLLREAEQW-DSLEVIDFGGGFGIPYRKYEKQPRLDMEATGRMLDDCIGRWAER 264

Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATI 281
             Y+ +  +EPG  +      +  TV  +  N  +     D          +        
Sbjct: 265 TGYNGRFMIEPGRYVTAECGVVLGTVHAVKNNGERRFAGTDLGFNVLQRPVMYDAFHDVE 324

Query: 282 YPNTGPYTAM------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                           + G  C +GDI         ++ GD I+  D   Y     + +N
Sbjct: 325 IYREDGVPQQETMQQTIVGNICESGDIMAAARELPEIQEGDIIAMLDAGAYGFAMSSSYN 384

Query: 336 GINMPTIAVKNVDGT-IKAIREFSYNDYYN 364
               P   + + DG      R  + +D   
Sbjct: 385 QRLRPAEVLVDKDGRDRLIRRRETLDDLLA 414


>gi|254468165|ref|ZP_05081571.1| diaminopimelate decarboxylase [beta proteobacterium KB13]
 gi|207086975|gb|EDZ64258.1| diaminopimelate decarboxylase [beta proteobacterium KB13]
          Length = 417

 Score =  222 bits (565), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 62/384 (16%), Positives = 130/384 (33%), Gaps = 23/384 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  K+ +L+ ++       +    +  A+K  +   +     +   G    S  E
Sbjct: 28  GTPAYVYSKKHILDQINFLQNALSDIDHLICFAVKANSNLSILKLFKECGCGFDIVSGGE 87

Query: 63  VMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--K 117
           +              ++   K      +  N +       +  +L +  D +Q+L K  K
Sbjct: 88  LQRVLTVDSLNSKIVFSGVGKSVSEIEMALNNNILAFNVESEEELFRINDISQRLSKIAK 147

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCENK 170
           + +R+NP+V              ++ G          K   + +   + G+  H   +  
Sbjct: 148 VSIRVNPNVDAKTHPYISTGLKDNKFGIDETSAIKLYKKAAKLDHIKITGIDCHIGSQLT 207

Query: 171 ---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP---VKDFCQRLKEFSEK 224
               F      L ++  E       +E I +GGGI  +  +     +  + Q +K++  K
Sbjct: 208 DLSPFEDAFIKLASLIDELESNQIAVEHIDIGGGIGISYNNEDISPIDFYVQMIKKYLLK 267

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATI-- 281
           Y+ +I LEPG  ++     + T V  I ++     + VD+++   +   L       I  
Sbjct: 268 YNKKIILEPGRFLIGKAGLMLTNVEYIKKSEHKNFVLVDAAMNDLMRPSLYNAFHEVINL 327

Query: 282 -YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                      + G  C  GD   +         GD ++  D   Y  +  + +N     
Sbjct: 328 SNTQDSNDIFDIVGPICETGDFLAKDRNI-KANQGDILAIMDAGAYGFSMSSNYNSRPRV 386

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + + D         +++D   
Sbjct: 387 PEIIVDKDEFYLIRERENFSDLIA 410


>gi|261837735|gb|ACX97501.1| diaminopimelate decarboxylase [Helicobacter pylori 51]
          Length = 404

 Score =  222 bits (565), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 70/385 (18%), Positives = 124/385 (32%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP+YL D  K+           K     +  ALK  +   +   L +   G    S+ E
Sbjct: 12  KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAKLESGADCVSIGE 71

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++   K        +  N   +   +  +L   +  AQ L  K  
Sbjct: 72  IYRALKAGIKPYRIVFSGVGKSEFEIEQALKLNILFLNVESFMELQTIEKIAQSLGIKAR 131

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           +  RINP++              ++ G   K+ +E       S       + FH   +  
Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHFHIGSQLL 191

Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224
                      +  I K        + +  +GGGI  + ++       D+ QR+    + 
Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQRILNALQG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I  EPG +IV  +  L T VL       K  VIVD+ +   +   L + + A    
Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVI 311

Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       V G  C + D F +      ++ GD++  E V  Y  +  + +N    
Sbjct: 312 TPSKGRKISPCDVVGPVCESSDTFLKGVHLPELEPGDKLVIEKVGAYGSSMASQYNSRPK 371

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
                          +  +  D + 
Sbjct: 372 LLELALEDHQIRVIRKREALEDLWR 396


>gi|46143532|ref|ZP_00204500.1| COG0019: Diaminopimelate decarboxylase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126208989|ref|YP_001054214.1| diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae L20]
 gi|126097781|gb|ABN74609.1| diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
          Length = 416

 Score =  222 bits (565), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 62/386 (16%), Positives = 115/386 (29%), Gaps = 25/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +   + + + +   G    S  E
Sbjct: 26  GTPAYIYSRATLERHWHAFDKAFGAHPHLICFAVKSNSNIALLNVMARLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +              ++   K       A+          ++++L++  + A +L K   
Sbjct: 86  LERVLAAGGEPSKVVFSGVAKSHSEIQRALEVGIRCFNIESIAELHRINEVAGQLGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G       E            + G+  H   +  
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVTQAREVYRLAKTLPNVKITGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
               F         + ++      ++  + LGGG+             +  K   EK   
Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGIELHHLDLGGGLGVPYNGEEPPHPTEYAKALLEKLKG 265

Query: 228 ----QIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
               +I LEPG AI  N   L T V  +     +N  IVD+ +   +   L         
Sbjct: 266 YADLEIILEPGRAITANAGILVTKVEYLKANEDRNFAIVDTGMNDMIRPALYEAYMRITE 325

Query: 283 PNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +           V G  C   D  G+      ++ GD I+      Y     + +N   
Sbjct: 326 VDQSLSREKAVYDVVGPICETSDFLGKDRELA-IEQGDLIAMRSAGAYGAAMSSTYNSRP 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364
                + + D         S+ D + 
Sbjct: 385 QAVEIMVDGDQAYLIKARASFADLWR 410


>gi|51247744|pdb|1TUF|A Chain A, Crystal Structure Of Diaminopimelate Decarboxylase From M.
           Jannaschi
 gi|51247745|pdb|1TUF|B Chain B, Crystal Structure Of Diaminopimelate Decarboxylase From M.
           Jannaschi
          Length = 434

 Score =  221 bits (564), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 71/398 (17%), Positives = 135/398 (33%), Gaps = 35/398 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN------AGVKLLLALKCFAAWGMFDTLNQYMDGTT 56
            TP Y++ ++++  N +  +   K           +  A    A   +   L +   G  
Sbjct: 29  GTPLYVMSEEQIKINYNRYIEAFKRWEEETGKEFIVAYAYXANANLAITRLLAKLGCGAD 88

Query: 57  SSSLYEVMLG-HEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQK 113
             S  E+ +        +   +N   K  E   +    N      +++S+L    + A++
Sbjct: 89  VVSGGELYIAKLSNVPSKKIVFNGNCKTKEEIIMGIEANIRAFNVDSISELILINETAKE 148

Query: 114 L--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLM 162
           L     +  RINP+V+             ++ G   +           +E E  NV G+ 
Sbjct: 149 LGETANVAFRINPNVNPKTHPKISTGLKKNKFGLDVESGIAMKAIKMALEMEYVNVVGVH 208

Query: 163 FHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ--- 216
            H   +      F+  +  + +   E      +IE ++LGGG+             +   
Sbjct: 209 CHIGSQLTDISPFIEETRKVMDFVVELKEEGIEIEDVNLGGGLGIPYYKDKQIPTQKDLA 268

Query: 217 ------RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHV 269
                  LK   +     + LEPG ++V     L   V  I E      V++D+ +   +
Sbjct: 269 DAIINTMLKYKDKVEMPNLILEPGRSLVATAGYLLGKVHHIKETPVTKWVMIDAGMNDMM 328

Query: 270 PDYLLYQESATIYPNTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
              +       I            + G  C + D+FG       V++GD ++  DV  Y 
Sbjct: 329 RPAMYEAYHHIINCKVKNEKEVVSIAGGLCESSDVFGRDRELDKVEVGDVLAIFDVGAYG 388

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           I+  N +N    P + + +  G        +Y D    
Sbjct: 389 ISMANNYNARGRPRMVLTSKKGVFLIRERETYADLIAK 426


>gi|332524336|ref|ZP_08400557.1| diaminopimelate decarboxylase [Rubrivivax benzoatilyticus JA2]
 gi|332107666|gb|EGJ08890.1| diaminopimelate decarboxylase [Rubrivivax benzoatilyticus JA2]
          Length = 424

 Score =  221 bits (564), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 55/382 (14%), Positives = 113/382 (29%), Gaps = 27/382 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +L+ L       +     +  A+K  +   +  T  +   G    S  E
Sbjct: 32  GTPLYVYSRTAMLDALAGYQRALEGLPHLICYAIKANSNLAVLQTFARAGCGFDIVSGGE 91

Query: 63  VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++   K       A+          ++ +L +  + A  +     
Sbjct: 92  LERVLAAGAEPSKIVFSGVGKTAAEMRRALEVGVHCFNVESLGELERLAEVAAAMGRRAP 151

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LR+NP V              ++ G    + +    +        V G+  H   +  
Sbjct: 152 VSLRVNPDVDAGTHPYISTGLKDNKFGIPHDEALAVYRRAAALPSLQVVGIDCHIGSQIT 211

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE---- 223
               +   L    ++ +        +  + +GGG+  T  D         ++  ++    
Sbjct: 212 QLEPYLDALGRVLDLVEAVEAEGIALAHVDVGGGLGITYTDEAPPSPETLVRGLADLMRA 271

Query: 224 --KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280
                 Q+ +EPG ++V N   L   V  +         + D+++   V   +     A 
Sbjct: 272 RGHGHRQLLVEPGRSLVGNAGVLLAEVQYLKPGETKNFCIVDAAMNDLVRPAMYEAWMAI 331

Query: 281 IYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                G      T  V G  C +GD  G       V  GD ++      Y +     +N 
Sbjct: 332 EPCRPGADTVAATWDVVGPVCESGDWLGRDRRLA-VAPGDIVAVLSAGAYGMAMAGNYNS 390

Query: 337 INMPTIAVKNVDGTIKAIREFS 358
                  + + D          
Sbjct: 391 RPRAAEILLDGDAVHVVRERED 412


>gi|332799321|ref|YP_004460820.1| diaminopimelate decarboxylase [Tepidanaerobacter sp. Re1]
 gi|332697056|gb|AEE91513.1| diaminopimelate decarboxylase [Tepidanaerobacter sp. Re1]
          Length = 444

 Score =  221 bits (564), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 64/401 (15%), Positives = 128/401 (31%), Gaps = 38/401 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++D+  +  N         N     +++ A K F    M   + +        S 
Sbjct: 29  GTPLYVMDENHIRENCRLYRDSLNNLHENSEVIYAGKAFLTMEMCKLIEEEGLSLDVVSG 88

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLH-- 115
            E+       F  +   ++   K      +        I+ +   +L   +D A+K    
Sbjct: 89  GELYTAIKSGFPSKRIYFHGNNKSYAELEMAAEYGVGRIVVDNFYELELLRDVAKKYQGK 148

Query: 116 -KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHN 165
             KI LR+ P +           +  S+ G            ++ +  +   + G   H 
Sbjct: 149 KIKILLRLTPGIEAHTHDYIKTGQLDSKFGFGMENGHAFMAVENALSIKGLKLMGFHCHI 208

Query: 166 NCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK--------D 213
             +      F      M++  +     +  +   I  GGG      +             
Sbjct: 209 GSQIFEDEPFKDAAKIMIQFAKIVNERYDFRTREIDFGGGFGIRYTEKDKPLAVKNYIEV 268

Query: 214 FCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268
             + +KE  +K+++ I    +EPG AIV    T   T+  I         V     +  +
Sbjct: 269 LVESVKEACKKHNMPIPKILIEPGRAIVGEAGTTLYTIGSIKNIPGVRKYVSVDGGMSDN 328

Query: 269 VPDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
           +   L   E + +  N           + G+ C +GD+         +  GD ++     
Sbjct: 329 IRPALYGAEYSAVIANKAGCPREEIVSIAGKCCESGDMLIWDINLPKIMPGDILAVFTTG 388

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            Y+ +  + +N +  P +           +R  +Y D  +N
Sbjct: 389 AYHYSMASNYNMMPKPAVVFVKNKTARLVVRRQTYEDLLSN 429


>gi|213964250|ref|ZP_03392482.1| diaminopimelate decarboxylase [Capnocytophaga sputigena Capno]
 gi|213953111|gb|EEB64461.1| diaminopimelate decarboxylase [Capnocytophaga sputigena Capno]
          Length = 398

 Score =  221 bits (564), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 59/384 (15%), Positives = 112/384 (29%), Gaps = 27/384 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           P Y+ D +K+ +          +   +++  A+K  +   +   +     G  + S+ EV
Sbjct: 16  PVYVYDAEKISSQYQRLTNAFASVPKLRINYAMKALSNIAVLKLMKSLGAGLDTVSIQEV 75

Query: 64  MLGH-EKFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            LG    F  E   +        EI+  +     +  + +S L +F    Q     + +R
Sbjct: 76  QLGLLAGFAPEQIIFTPNGVSISEIEEAMRLGVQLNIDNLSFLEQFGT--QHPEVPVCIR 133

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFLCF 175
           INP V              S+ G                  ++NG+  H   +      F
Sbjct: 134 INPHVMAGGNSNISVGHIDSKFGISIHQIPHILRIVENTKMHINGIHMHTGSDILDIDVF 193

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
               + I  E       +++I  G G     K+  ++   + L E       +   E G 
Sbjct: 194 LYAAE-ILFETAKNFKDLQFIDFGSGFKVPYKEGDIQTNIEELGERLSTRFAEFCQEYGR 252

Query: 236 ----------AIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLY--QESATIY 282
                      +V+        V  + +        +DS     +             + 
Sbjct: 253 DLTLAFEPGKFLVSEAGCFLVKVNVVKQTTSTVFAGIDSGFNHLIRPMFYGATHYIENLS 312

Query: 283 PNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
              G      V G  C   D F        +  GD + F +   Y     + +N    P 
Sbjct: 313 NPEGKKRFYSVVGYICET-DTFASNRQIAEITEGDILCFHNAGAYCYTMASNYNSRLRPA 371

Query: 342 IAVKNVDGTIKAIREFSYNDYYNN 365
             +          +  ++ D   N
Sbjct: 372 EVLWQNGEAKLIRKAETFEDLVRN 395


>gi|147677570|ref|YP_001211785.1| diaminopimelate decarboxylase [Pelotomaculum thermopropionicum SI]
 gi|146273667|dbj|BAF59416.1| diaminopimelate decarboxylase [Pelotomaculum thermopropionicum SI]
          Length = 440

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 59/398 (14%), Positives = 116/398 (29%), Gaps = 36/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP Y++D+     N            G + + A K      +   + +   G    S  
Sbjct: 30  GTPLYVLDEALFRQNCRDYYTHFTVRYGAEAVYAGKALLNLAVCRIVEEEGLGLDVVSGG 89

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+       F  E   ++   K     A+   +    I+ + + +L      A ++ KK 
Sbjct: 90  ELYTALKANFPAEKIFFHGNNKSSAELAMALETGVGRIVVDNMFELELLNRMAGEVGKKA 149

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNC 167
              LR+ P +           +  S+ G   +           +E +   + G+  H   
Sbjct: 150 AVILRLTPGIEAHTHEYIKTGQIDSKFGLVIENGQAMAGVRRALEMDGIELKGVHCHIGS 209

Query: 168 ENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223
           +      +      M+  +   +      +  + +GGG+     +       Q   +   
Sbjct: 210 QIFELDSYSQAAKIMMSFVYLVYRETGCLLGELDMGGGLGVYYAEGDKPRPIQEYADVLM 269

Query: 224 KYSVQ-----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVP 270
           K  ++           + +EPG +I     T   TV  I         V     +  +  
Sbjct: 270 KAVMEKASEYGIPVPKVIVEPGRSICGPAGTTLYTVGAIKNIPGIRKYVAVDGGMGDNPR 329

Query: 271 DYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
             L          N           V G+ C +GD+          + GD ++      Y
Sbjct: 330 PALYQARYEACLANKAGRQPEEVVSVAGKCCESGDMLIWDISLPAAEPGDILAVSCTGAY 389

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           N      +N +  P + +          R  +Y D   
Sbjct: 390 NYTMSMNYNRLPRPAMVLVGNGRAELINRRETYEDLIR 427


>gi|188586528|ref|YP_001918073.1| diaminopimelate decarboxylase [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179351215|gb|ACB85485.1| diaminopimelate decarboxylase [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 438

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 65/401 (16%), Positives = 128/401 (31%), Gaps = 38/401 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  ++D++ + N       I +      +L  A K F +  +   + +        S 
Sbjct: 28  DTPLNILDEEHIRNKCRKYRRILEQYYPTTELAYAGKAFLSTTICKIVEEEGLFLDVVSE 87

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK- 116
            E+       F G+   ++   K           N   I+ ++  +L   +  AQK    
Sbjct: 88  GELFTAVQAGFPGDKLLFHGNNKTSRELEYALDCNVGRIVVDSFLELELIEKLAQKKSTR 147

Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
            +I  R+ P +           +  S+ G   +           I+S   ++ GL  H  
Sbjct: 148 VQIYFRVKPGIEAHTHKYILTGQEDSKFGFSLRQDDIMKAVNFAIKSSYIDLQGLHCHIG 207

Query: 167 CENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            +      +      M++ +      +   I  + LGGG+    +    K     L    
Sbjct: 208 SQINESKPYRLAAKTMMELLISIQKIYNYSISELDLGGGMGIKYRSDDSKLDIDSLMNEI 267

Query: 223 EKYSVQI-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            +  + +             EPG +I+     +   V  I E       V     +  ++
Sbjct: 268 SQLILDMAKDSKIELPKLIFEPGRSIIGEAGVMLYRVGVIKEIPGIRNYVSVDGGMSDNI 327

Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVA 324
              L   E + +  N   Y       V G+ C +GD+  +       +  GD ++     
Sbjct: 328 RPALYGAEYSAVVANKANYPHNNSYTVVGKICESGDVLLQNIDLVDNLTPGDLLTVFSCG 387

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            Y  +  + +N +  P + + N       +R  S  D   N
Sbjct: 388 AYTYSMSSNYNRLPKPAVVLVNQGQADLIVRRESLEDVIQN 428


>gi|237751705|ref|ZP_04582185.1| diaminopimelate decarboxylase [Helicobacter bilis ATCC 43879]
 gi|229373071|gb|EEO23462.1| diaminopimelate decarboxylase [Helicobacter bilis ATCC 43879]
          Length = 448

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 61/410 (14%), Positives = 119/410 (29%), Gaps = 52/410 (12%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D + L                 +  ALK  +   + +TL +   G    SL E
Sbjct: 18  GTPLYIYDIESLQQQYLKIKDSFGGFKSLVCYALKANSNLSILNTLAKLGSGADCVSLNE 77

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDK--------- 110
           V              ++   K+              I   +  +L + +           
Sbjct: 78  VKRAILAGIPPYKIIFSGVGKEDYEIEEAIKLGILFINVESKMELYRIEAITKRLYGDSI 137

Query: 111 ----------------------AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCK 148
                                 + +   +I +R+NP V              ++ G   +
Sbjct: 138 AKKSSHTTETSQADSLPLTTPESMQYQTRISIRVNPDVDAKTHPYISTGLHENKFGLDIE 197

Query: 149 DKIE-------SEIKNVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISL 198
              E       SE  N  G+ +H   +           +   ++ K        +++  +
Sbjct: 198 SAKELYIYAHKSEFLNPIGIHYHIGSQILDKAPLLESTQKILDLAKSLKALQIPLKFFDI 257

Query: 199 GGGIHFTDKDYP---VKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD-ISEN 254
           GGG   +  +     ++D+   +    +        EPG  I+ N+  L T V+      
Sbjct: 258 GGGFGISYNNEESFVIQDYIHEIIRKIDALDFTAICEPGRFIMGNSGALLTRVIGEKQTA 317

Query: 255 IKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEK 310
            K  VIVD ++   +   L +      +             V G  C +GD  G+     
Sbjct: 318 NKRFVIVDCAMNDLLRPSLYHAYHHISHITQKETDSTQICDVVGAICESGDYVGKDIKLP 377

Query: 311 PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
             + GD +  E    Y  +  + +N    P         +       +++
Sbjct: 378 HCESGDLLLIESAGAYGYSMSSNYNSRMRPAEIAIYNGESYLIKERENFD 427


>gi|257883703|ref|ZP_05663356.1| diaminopimelate decarboxylase [Enterococcus faecium 1,231,501]
 gi|257819541|gb|EEV46689.1| diaminopimelate decarboxylase [Enterococcus faecium 1,231,501]
          Length = 419

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 66/394 (16%), Positives = 131/394 (33%), Gaps = 33/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           KTP Y+ D++K+   + +       K    K+L A K F    M   + +Y  G    S 
Sbjct: 19  KTPLYVYDEEKMRQTMLSFKRGFVSKRFDTKVLYASKAFQTIEMLHLVREYGFGLDVVSG 78

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKK 117
            E+    +  F  +T  ++   K  E        D   I+ + + ++    + +Q+  KK
Sbjct: 79  GEIYTALQADFPRDTIYFHGNNKTPEELIYALENDLLHIVADNLMEVELLAELSQRYLKK 138

Query: 118 IGLRINPSVS--YSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
           I + +  +V                S+ G   +            ES    + G   H  
Sbjct: 139 ICIMLRLNVGVEAHTHEYIVTAHIDSKFGMSYESKECQQALQLIKESSYLELEGFHAHIG 198

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226
            +      + A +  +      F   +  ++LGGG              +   +   +Y+
Sbjct: 199 SQIFDVTAWLAEIDKLTNYLTDFDQPLS-LNLGGGFGIRYTQNDQPIPVEEALKKLIEYT 257

Query: 227 -----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL 274
                       Q+ +EPG +IV    T   T+  I +         D  +  ++   L 
Sbjct: 258 EEALEKRKLTIRQLLIEPGRSIVGEAGTTLYTIGFIKKTPHKKYYFVDGGMTDNIRPALY 317

Query: 275 YQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
             E     A            + G+ C +GD+  +  +    + GD ++      Y  + 
Sbjct: 318 QAEYDCDLAAKLSEEKTEKVTIAGKMCESGDVVIKEAYLPKAESGDLLAVYSTGAYGYSM 377

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            + +N    P +   N   +   +R  +++D   
Sbjct: 378 SSNYNRATRPAVVFVNNGQSRLVVRRQAFSDLLR 411


>gi|294618664|ref|ZP_06698199.1| diaminopimelate decarboxylase [Enterococcus faecium E1679]
 gi|314939328|ref|ZP_07846574.1| diaminopimelate decarboxylase [Enterococcus faecium TX0133a04]
 gi|314941268|ref|ZP_07848162.1| diaminopimelate decarboxylase [Enterococcus faecium TX0133C]
 gi|314950672|ref|ZP_07853750.1| diaminopimelate decarboxylase [Enterococcus faecium TX0133A]
 gi|314992037|ref|ZP_07857488.1| diaminopimelate decarboxylase [Enterococcus faecium TX0133B]
 gi|314998019|ref|ZP_07862912.1| diaminopimelate decarboxylase [Enterococcus faecium TX0133a01]
 gi|291595093|gb|EFF26435.1| diaminopimelate decarboxylase [Enterococcus faecium E1679]
 gi|313587978|gb|EFR66823.1| diaminopimelate decarboxylase [Enterococcus faecium TX0133a01]
 gi|313593358|gb|EFR72203.1| diaminopimelate decarboxylase [Enterococcus faecium TX0133B]
 gi|313597094|gb|EFR75939.1| diaminopimelate decarboxylase [Enterococcus faecium TX0133A]
 gi|313599869|gb|EFR78712.1| diaminopimelate decarboxylase [Enterococcus faecium TX0133C]
 gi|313641419|gb|EFS05999.1| diaminopimelate decarboxylase [Enterococcus faecium TX0133a04]
          Length = 419

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 65/394 (16%), Positives = 130/394 (32%), Gaps = 33/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           KTP Y+ D++K+   + +       K    K+L A K F    M   + +Y  G    S 
Sbjct: 19  KTPLYVYDEEKMRQTMLSFKRGFVSKRFDTKVLYASKAFQTIEMLHLVREYGFGLDVVSG 78

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKK 117
            E+    +  F  +T  ++   K  E        D   I+ + + ++    + +Q+  KK
Sbjct: 79  GEIYTALQADFPRDTIYFHGNNKTPEELIYALENDLLHIVADNLMEVELLAELSQRYLKK 138

Query: 118 IGLRINPSVS--YSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
           I + +  +V                S+ G   +            E     + G   H  
Sbjct: 139 ICIMLRLNVGVEAHTHEYIVTAHIDSKFGMSYESKECQQALQLIKERSYLELEGFHAHIG 198

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226
            +      + A +  +      F   +  ++LGGG              +   +   +Y+
Sbjct: 199 SQIFDVTAWLAEIDKLTNYLTDFDQPLS-LNLGGGFGIRYTQNDQPIPVEEALKKLIEYT 257

Query: 227 -----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL 274
                       Q+ +EPG +IV    T   T+  I +         D  +  ++   L 
Sbjct: 258 EEALEKRKLTIRQLLIEPGRSIVGEAGTTLYTIGFIKKTPHKKYYFVDGGMTDNIRPALY 317

Query: 275 YQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
             E     A            + G+ C +GD+  +  +    + GD ++      Y  + 
Sbjct: 318 QAEYDCDLAAKLSEEKTEKVTIAGKMCESGDVVIKEAYLPKAESGDLLAVYSTGAYGYSM 377

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            + +N    P +   N   +   +R  +++D   
Sbjct: 378 SSNYNRATRPAVVFVNNGQSRLIVRRQAFSDLLR 411


>gi|160902683|ref|YP_001568264.1| Orn/DAP/Arg decarboxylase 2 [Petrotoga mobilis SJ95]
 gi|160360327|gb|ABX31941.1| Orn/DAP/Arg decarboxylase 2 [Petrotoga mobilis SJ95]
          Length = 413

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 71/391 (18%), Positives = 123/391 (31%), Gaps = 31/391 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TP+YL D++ + N + T       A  K   A+K      +     +   G   SS+ 
Sbjct: 22  VQTPFYLYDEKGIRNRIKTLKDAFSWADFKEFFAVKATPNPNILKITKEEGCGVDCSSMA 81

Query: 62  EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E++      F      +        E +  LS    +  + VS ++  K+K +       
Sbjct: 82  ELVAAEKSGFVNNEILFTSNDTPLQEYEKALSLNAILNLDDVSHIDLLKEKYKLPD---L 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVNGLMFHNN------CEN 169
           + I  +           N   S+ G   KD I      +   V     H           
Sbjct: 139 VSIRYNPGGDFGNEIIGNLKESKFGVPKKDLINGFARLKDYGVKRFGLHAMLISNELNPQ 198

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK----- 224
                   + +   +     +   E+I+LGGG     K    +     +    +K     
Sbjct: 199 NIIKVAQFLFETAVEVNKKLVIDFEFINLGGGFGIPYKPEETELDIYYISRQIKKLYENV 258

Query: 225 ------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                    +IY+E G  I      L T VL I E+ K    +D++    +   +     
Sbjct: 259 LLENGLKPPKIYMEHGRYITGPNGYLITKVLHIKESYKKYAGIDANSANLLRPAMYKAYH 318

Query: 279 ATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                    +       V G  C   D          +K GD + F DV  +  +    +
Sbjct: 319 HITVLNKNSDEKTELYDVVGSLCENNDKLATDRLLPELKRGDVLVFHDVGAHGYSMGYNY 378

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   D   K IR   + +DY+ 
Sbjct: 379 NGKLRSAEYLFTKDRAFKMIRRAETLDDYFA 409


>gi|86142671|ref|ZP_01061110.1| diaminopimelate decarboxylase [Leeuwenhoekiella blandensis MED217]
 gi|85830703|gb|EAQ49161.1| diaminopimelate decarboxylase [Leeuwenhoekiella blandensis MED217]
          Length = 405

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 63/386 (16%), Positives = 116/386 (30%), Gaps = 27/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            +P Y+ D +K+ +              +++  A+K  +   +   ++ +  G  + S+ 
Sbjct: 14  GSPVYVYDAEKIESQYKRLTGAFNKVKNLRINYAVKALSNLAVLQLIHGFGAGMDTVSIQ 73

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           EV L            +        E++AV      I  + +S L +F  K       + 
Sbjct: 74  EVRLALAAGIDPSKIMFTPNGVSLDELEAVAKMGVQINIDNLSILEQFGTK--HPKTPVC 131

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFL 173
           +RINP V              S+ G                  N+NG+  H   +     
Sbjct: 132 VRINPHVMAGGNTNISVGHIDSKFGISIHQIPHLLRIVKNTGMNINGIHMHTGSDILDID 191

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI---- 229
            F    + I  +       +E++  G G     K+  ++   + L E   K         
Sbjct: 192 VFLHAAE-ILFDTAKDFKDLEFLDFGSGFKVPYKEGDIETNIEELGEKLSKRFNAFEKNY 250

Query: 230 ------YLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESA--T 280
                   EPG+ +V+        V  I +        VDS     +             
Sbjct: 251 GKPLTLVFEPGKFLVSEAGKFLVQVNVIKQTTSTVFAQVDSGFNHLIRPMFYGSRHEITN 310

Query: 281 IYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
           I    G      V G  C   D F        +  GD ++F +   Y  +  + +N    
Sbjct: 311 ISNPKGRERFYSVVGYICET-DTFATNRRIAEIAEGDILAFSNSGAYCFSMASNYNSRYR 369

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365
           P   +             +++D   N
Sbjct: 370 PAEVLFLDGKAHLIRERETFDDLIKN 395


>gi|308062890|gb|ADO04777.1| carboxynorspermidine decarboxylase [Helicobacter pylori Sat464]
          Length = 405

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 137/400 (34%), Positives = 209/400 (52%), Gaps = 38/400 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y+++ ++L  N      +R+ +G K+LLALK +A W  F  L Q ++G  +S LY
Sbjct: 7   IPTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66

Query: 62  EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112
           E  L  E+FGG     E   Y+ A+K+ E+ A+L    +IIFN+  Q     ++  DK +
Sbjct: 67  EAKLAFEEFGGRESQKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNK 126

Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162
           +L        K+GLRINP  S     + +P    SRLG    +  +   ++    V+GL 
Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKVSRLGITPSEFEKGVKEHGLERVSGLH 186

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
           FH +CE          L+++E+ F  ++  + W++ GGG H T  DY V    Q +K+F 
Sbjct: 187 FHTHCEQN-ADALCRTLEHVERHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQTIKDFK 245

Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
           E+Y   ++ LEPGEAI      L  +V+DI +N + + I+D+S  AH+PD L       I
Sbjct: 246 ERYRNIEVVLEPGEAIGWQCGFLIASVIDIVQNDQEIAILDASFSAHMPDCLEMPYRPGI 305

Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
                             N G ++  + G +CLAGD  G F FE P+K GD+I F+D+  
Sbjct: 306 LKVSVENDEELIEVERGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGDKIVFQDMLH 365

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y I + N FNG+ +P++A  +  G  K ++ FSY DY N 
Sbjct: 366 YTIVKNNSFNGVPLPSLAKLDQQG-FKILKNFSYEDYKNR 404


>gi|307257594|ref|ZP_07539354.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|306863897|gb|EFM95820.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
          Length = 416

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 62/386 (16%), Positives = 115/386 (29%), Gaps = 25/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +   + + + +   G    S  E
Sbjct: 26  GTPAYIYSRATLERHWHAFDKAFGAHPHLICFAVKSNSNIALLNVMVRLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +              ++   K       A+          ++++L++  + A +L K   
Sbjct: 86  LERVLAAGGEPSKVVFSGVAKSHSEIQRALEVGIRCFNIESIAELHRINEVAGQLGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G       E            + G+  H   +  
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVTQAREVYRLAKTLPNVKITGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
               F         + ++      ++  + LGGG+             +  K   EK   
Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGIELHHLDLGGGLGVPYNGEEPPHPTEYAKALLEKLKG 265

Query: 228 ----QIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
               +I LEPG AI  N   L T V  +     +N  IVD+ +   +   L         
Sbjct: 266 YADLEIILEPGRAITANAGILVTKVEYLKANEDRNFAIVDTGMNDMIRPALYEAYMQITE 325

Query: 283 PNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +           V G  C   D  G+      ++ GD I+      Y     + +N   
Sbjct: 326 VDQSLSREKAVYDVVGPICETSDFLGKDRELA-IEQGDLIAMRSAGAYGAAMSSTYNSRP 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364
                + + D         S+ D + 
Sbjct: 385 QAVEIMVDGDQAYLIKARASFADLWR 410


>gi|303250943|ref|ZP_07337133.1| diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|302650215|gb|EFL80381.1| diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 416

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 62/386 (16%), Positives = 115/386 (29%), Gaps = 25/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +   + + + +   G    S  E
Sbjct: 26  GTPAYIYSRATLERHWHAFDKAFGAHPHLICFAVKSNSNIALLNVMVRLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +              ++   K       A+          ++++L++  + A +L K   
Sbjct: 86  LERVLAAGGEPSKVVFSGVAKSHSEIQRALEVGIRCFNIESIAELHRINEVAGQLGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G       E            + G+  H   +  
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVTQAREVYRLAKTLPNVKITGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
               F         + ++      ++  + LGGG+             +  K   EK   
Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGIELHHLDLGGGLGVPYNGEEPPHPTEYAKALLEKLKG 265

Query: 228 ----QIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
               +I LEPG AI  N   L T V  +     +N  IVD+ +   +   L         
Sbjct: 266 YADLEIILEPGRAITANAGILVTKVEYLKANEDRNFAIVDTGMNDMIRPALYEAYMQITE 325

Query: 283 PNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +           V G  C   D  G+      ++ GD I+      Y     + +N   
Sbjct: 326 VDQSLSREKAVYDVVGPICETSDFLGKDRELA-IEQGDLIAMRSAGAYGAAMSSTYNSRP 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364
                + + D         S+ D + 
Sbjct: 385 QAVEIMVDGDQAYLIKARASFADLWR 410


>gi|237814107|ref|YP_002898558.1| diaminopimelate decarboxylase [Burkholderia pseudomallei MSHR346]
 gi|237505838|gb|ACQ98156.1| diaminopimelate decarboxylase [Burkholderia pseudomallei MSHR346]
          Length = 423

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 57/388 (14%), Positives = 118/388 (30%), Gaps = 27/388 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++  +  L    +            + +A+K  +  G+ +   +   G    S  E
Sbjct: 28  GTPLFVYSRAALTAAYEAYAKACAGRRASIHVAVKANSNLGVLNVFARLGAGFDIVSGGE 87

Query: 63  VMLGHEKFG-GETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G      ++   K  D    A+ +        ++ +L++    A  L     
Sbjct: 88  LARVLAAGGRARDVVFSGVGKSADEMRVALEAGVKCFNVESIPELDRLNAVAASLGKRAP 147

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D               V G+  H   +  
Sbjct: 148 VSLRVNPDVDPKTHPYISTGLKANKFGIAFDDARATYRAAAAQPNLEVVGIDCHIGSQIT 207

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               +   +    ++ +       QI  + +GGG+  T  D    D    ++    +   
Sbjct: 208 ELSPYLDAIDKLLDLVERIEADGVQIHHVDVGGGLGITYDDETPPDIGAYVRAVLARIDA 267

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                 +I+ EPG ++  N   L T V  + +   KN  IVD+++       +     A 
Sbjct: 268 RGHGQREIWFEPGRSLTGNAGILLTRVEFLKQGEEKNFAIVDAAMNDLARPAMYQAFHAI 327

Query: 281 I----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
           +      +       + G  C +GD  G       +  GD ++      Y     + +N 
Sbjct: 328 VPVAPRTDVAAAVYDIVGPVCESGDWLGRERSLA-IAPGDLLAIRSAGAYGFTMSSNYNT 386

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364
                  + +           +    + 
Sbjct: 387 RPRAAEVIVDGANAHLVRPRETVESLFE 414


>gi|242084786|ref|XP_002442818.1| hypothetical protein SORBIDRAFT_08g003330 [Sorghum bicolor]
 gi|241943511|gb|EES16656.1| hypothetical protein SORBIDRAFT_08g003330 [Sorghum bicolor]
          Length = 489

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 63/386 (16%), Positives = 117/386 (30%), Gaps = 27/386 (6%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           +P+YL  K ++L N        +     +  A+K      +   L +   G    S  E+
Sbjct: 95  SPFYLYSKPQILRNFAAYRDALQGLRSIVGYAVKANNNLPVLRVLRELGCGAVLVSGNEL 154

Query: 64  MLGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIG 119
            L     F      +N       ++     +   +  ++   L       +A      + 
Sbjct: 155 RLALQAGFDPARCIFNGNGKTFEDLKLAAESGVFVNVDSEFDLENIVRAARATGKKVPVL 214

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCENKS 171
           LRINP V              S+ G + +                 + G+  H       
Sbjct: 215 LRINPDVDPQVHPYVATGNKTSKFGIRNEKLQWFLDSIKSYPDEIKLVGVHCHLGSTITK 274

Query: 172 FLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEFSE 223
              F      +            ++E++++GGG+               D    ++E   
Sbjct: 275 VDIFRDAAVLMVNYVDEIRAQGFKLEYLNIGGGLGIDYHHTDAVLPTPMDLINTVRELVL 334

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-HVPDYLLYQESATIY 282
              + + +EPG +++ NT      V  +  N     IV     A  +   L         
Sbjct: 335 SQDLTLIIEPGRSLIANTCCFVNRVTGVKSNGTKNFIVVDGSMAELIRPSLYGAYQHIEL 394

Query: 283 PNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
            +         T  + G  C + D  G+         G  +   D   Y ++  + +N  
Sbjct: 395 VSPPTPGAEVATFDIVGPVCESADFLGKDRELPKPDEGAGLVVHDAGAYCMSMASTYNLK 454

Query: 338 NMPTIAVKNVDGTIKAIR-EFSYNDY 362
             P       DG+I  IR E  ++DY
Sbjct: 455 LRPPEYWVEEDGSIVKIRHEEKFDDY 480


>gi|126453755|ref|YP_001067996.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 1106a]
 gi|167847626|ref|ZP_02473134.1| diaminopimelate decarboxylase [Burkholderia pseudomallei B7210]
 gi|242316004|ref|ZP_04815020.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 1106b]
 gi|126227397|gb|ABN90937.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 1106a]
 gi|242139243|gb|EES25645.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 1106b]
          Length = 423

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 57/388 (14%), Positives = 119/388 (30%), Gaps = 27/388 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++  +  L    +            + +A+K  +  G+ +   +   G    S  E
Sbjct: 28  GTPLFVYSRAALTAAYEAYAKACAGRRASIHVAVKANSNLGVLNVFARLGAGFDIVSGGE 87

Query: 63  VMLGHEKFG-GETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G      ++   K  D    A+ +        ++ +L++    A  L     
Sbjct: 88  LARVLAAGGRARDVVFSGVGKSADEMRVALEAGVKCFNVESIPELDRLNAVAASLGKRAP 147

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D   +           V G+  H   +  
Sbjct: 148 VSLRVNPDVDPKTHPYISTGLKANKFGIAFDDARATYRAAAALPNLEVVGIDCHIGSQIT 207

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               +   +    ++ +       QI  + +GGG+  T  D    D    ++    +   
Sbjct: 208 ELSPYLDAIDKLLDLVERIEADGVQIHHVDVGGGLGITYDDETPPDIGAYVRAVLARIDA 267

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                 +I+ EPG ++  N   L T V  + +   KN  IVD+++       +     A 
Sbjct: 268 RGHGQREIWFEPGRSLTGNAGILLTRVEFLKQGEEKNFAIVDAAMNDLARPAMYQAFHAI 327

Query: 281 I----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
           +      +       + G  C +GD  G       +  GD ++      Y     + +N 
Sbjct: 328 VPVAPRTDVAAAVYDIVGPVCESGDWLGRERSLA-IAPGDLLAIRSAGAYGFTMSSNYNT 386

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364
                  + +           +    + 
Sbjct: 387 RPRAAEVIVDGANAHLVRPRETVESLFE 414


>gi|76810164|ref|YP_335101.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 1710b]
 gi|167740511|ref|ZP_02413285.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 14]
 gi|167904581|ref|ZP_02491786.1| diaminopimelate decarboxylase [Burkholderia pseudomallei NCTC
           13177]
 gi|167912845|ref|ZP_02499936.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 112]
 gi|254190340|ref|ZP_04896848.1| diaminopimelate decarboxylase [Burkholderia pseudomallei Pasteur
           52237]
 gi|254258974|ref|ZP_04950028.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 1710a]
 gi|76579617|gb|ABA49092.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 1710b]
 gi|157938016|gb|EDO93686.1| diaminopimelate decarboxylase [Burkholderia pseudomallei Pasteur
           52237]
 gi|254217663|gb|EET07047.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 1710a]
          Length = 423

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 57/388 (14%), Positives = 119/388 (30%), Gaps = 27/388 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++  +  L    +            + +A+K  +  G+ +   +   G    S  E
Sbjct: 28  GTPLFVYSRAALTAAYEAYAKACAGRRASIHVAVKANSNLGVLNVFARLGAGFDIVSGGE 87

Query: 63  VMLGHEKFG-GETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G      ++   K  D    A+ +        ++ +L++    A  L     
Sbjct: 88  LARVLAAGGRARDVVFSGVGKSADEMRVALEAGVKCFNVESIPELDRLNAVAASLGKRAP 147

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D   +           V G+  H   +  
Sbjct: 148 VSLRVNPDVDPKTHPYISTGLKANKFGIAFDDARATYRAAAALPNLEVVGIDCHIGSQIT 207

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               +   +    ++ +       QI  + +GGG+  T  D    D    ++    +   
Sbjct: 208 ELSPYLDAIDKLLDLVERIEADGVQIHHVDVGGGLGITYDDETPPDIGAYVRAVLARIDA 267

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                 +I+ EPG ++  N   L T V  + +   KN  IVD+++       +     A 
Sbjct: 268 RGHGQREIWFEPGRSLTGNAGILLTRVEFLKQGEEKNFAIVDAAMNDLARPAMYQAFHAI 327

Query: 281 I----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
           +      +       + G  C +GD  G       +  GD ++      Y     + +N 
Sbjct: 328 VPVAPRTDVAAAVYDIVGPVCESGDWLGRERSLA-IAPGDLLAIRSAGAYGFTMSSNYNT 386

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364
                  + +           +    + 
Sbjct: 387 RPRAAEVIVDGANAHLVRPRETVESLFE 414


>gi|53720784|ref|YP_109770.1| diaminopimelate decarboxylase [Burkholderia pseudomallei K96243]
 gi|53723888|ref|YP_104274.1| diaminopimelate decarboxylase [Burkholderia mallei ATCC 23344]
 gi|67641896|ref|ZP_00440661.1| diaminopimelate decarboxylase [Burkholderia mallei GB8 horse 4]
 gi|121598495|ref|YP_994480.1| diaminopimelate decarboxylase [Burkholderia mallei SAVP1]
 gi|124383764|ref|YP_001027872.1| diaminopimelate decarboxylase [Burkholderia mallei NCTC 10229]
 gi|126440111|ref|YP_001060712.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 668]
 gi|126450624|ref|YP_001082967.1| diaminopimelate decarboxylase [Burkholderia mallei NCTC 10247]
 gi|134283137|ref|ZP_01769838.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 305]
 gi|167004384|ref|ZP_02270142.1| diaminopimelate decarboxylase [Burkholderia mallei PRL-20]
 gi|167721539|ref|ZP_02404775.1| diaminopimelate decarboxylase [Burkholderia pseudomallei DM98]
 gi|167817718|ref|ZP_02449398.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 91]
 gi|167826115|ref|ZP_02457586.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 9]
 gi|167896199|ref|ZP_02483601.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 7894]
 gi|167920804|ref|ZP_02507895.1| diaminopimelate decarboxylase [Burkholderia pseudomallei BCC215]
 gi|217424773|ref|ZP_03456270.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 576]
 gi|226198282|ref|ZP_03793853.1| diaminopimelate decarboxylase [Burkholderia pseudomallei Pakistan
           9]
 gi|254174722|ref|ZP_04881383.1| diaminopimelate decarboxylase [Burkholderia mallei ATCC 10399]
 gi|254180377|ref|ZP_04886975.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 1655]
 gi|254201350|ref|ZP_04907714.1| diaminopimelate decarboxylase [Burkholderia mallei FMH]
 gi|254206692|ref|ZP_04913043.1| diaminopimelate decarboxylase [Burkholderia mallei JHU]
 gi|52211198|emb|CAH37187.1| diaminopimelate decarboxylase [Burkholderia pseudomallei K96243]
 gi|52427311|gb|AAU47904.1| diaminopimelate decarboxylase [Burkholderia mallei ATCC 23344]
 gi|121227305|gb|ABM49823.1| diaminopimelate decarboxylase [Burkholderia mallei SAVP1]
 gi|124291784|gb|ABN01053.1| diaminopimelate decarboxylase [Burkholderia mallei NCTC 10229]
 gi|126219604|gb|ABN83110.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 668]
 gi|126243494|gb|ABO06587.1| diaminopimelate decarboxylase [Burkholderia mallei NCTC 10247]
 gi|134245332|gb|EBA45425.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 305]
 gi|147747244|gb|EDK54320.1| diaminopimelate decarboxylase [Burkholderia mallei FMH]
 gi|147752234|gb|EDK59300.1| diaminopimelate decarboxylase [Burkholderia mallei JHU]
 gi|160695767|gb|EDP85737.1| diaminopimelate decarboxylase [Burkholderia mallei ATCC 10399]
 gi|184210916|gb|EDU07959.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 1655]
 gi|217392229|gb|EEC32254.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 576]
 gi|225929802|gb|EEH25818.1| diaminopimelate decarboxylase [Burkholderia pseudomallei Pakistan
           9]
 gi|238522908|gb|EEP86350.1| diaminopimelate decarboxylase [Burkholderia mallei GB8 horse 4]
 gi|243060289|gb|EES42475.1| diaminopimelate decarboxylase [Burkholderia mallei PRL-20]
          Length = 423

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 57/388 (14%), Positives = 119/388 (30%), Gaps = 27/388 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++  +  L    +            + +A+K  +  G+ +   +   G    S  E
Sbjct: 28  GTPLFVYSRAALTAAYEAYAKACAGRRASIHVAVKANSNLGVLNVFARLGAGFDIVSGGE 87

Query: 63  VMLGHEKFG-GETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G      ++   K  D    A+ +        ++ +L++    A  L     
Sbjct: 88  LARVLAAGGRARDVVFSGVGKSADEMRVALEAGVKCFNVESIPELDRLNAVAASLGKRAP 147

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D   +           V G+  H   +  
Sbjct: 148 VSLRVNPDVDPKTHPYISTGLKANKFGIAFDDARATYRAAAALPNLEVVGIDCHIGSQIT 207

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               +   +    ++ +       QI  + +GGG+  T  D    D    ++    +   
Sbjct: 208 ELSPYLDAIDKLLDLVERIEADGVQIHHVDVGGGLGITYDDETPPDIGAYVRAVLARIDA 267

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                 +I+ EPG ++  N   L T V  + +   KN  IVD+++       +     A 
Sbjct: 268 RGHGQREIWFEPGRSLTGNAGILLTRVEFLKQGEEKNFAIVDAAMNDLARPAMYQAFHAI 327

Query: 281 I----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
           +      +       + G  C +GD  G       +  GD ++      Y     + +N 
Sbjct: 328 VPVAPRTDVAAAVYDIVGPVCESGDWLGRERSLA-IAPGDLLAIRSAGAYGFTMSSNYNT 386

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364
                  + +           +    + 
Sbjct: 387 RPRAAEVIVDGANAHLVRPRETVESLFE 414


>gi|109948161|ref|YP_665389.1| carboxynorspermidine decarboxylase [Helicobacter acinonychis str.
           Sheeba]
 gi|109715382|emb|CAK00390.1| carboxynorspermidine decarboxylase [Helicobacter acinonychis str.
           Sheeba]
          Length = 405

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 137/400 (34%), Positives = 212/400 (53%), Gaps = 38/400 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y+++ ++L  N +    + + +G K+LLALK +A W  F  L + ++G  +S LY
Sbjct: 7   IPTPCYVLESERLEKNANILEIVHQQSGAKILLALKGYAFWREFGILRKKLNGCCASGLY 66

Query: 62  EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112
           E  L  E+FGG     E   Y+ A+K+ EI+A+L    +IIFN+  Q     ++  +K +
Sbjct: 67  EAKLAFEEFGGRESQKEICVYSPAFKEAEINAILPLATSIIFNSFYQYTTYKDRILEKNK 126

Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162
           +L        K+GLRINP  S     + +P    SRLG    +  +   ++    VNGL 
Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKASRLGIVPSEFEKGVKEHGLEGVNGLH 186

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
           FH +CE          L+++E+ F  ++  +EW++ GGG H T  DY V    Q +K+F 
Sbjct: 187 FHTHCEQN-ADALCRTLEHVERHFKPYLEGMEWVNFGGGHHITRSDYDVDLLIQTIKDFK 245

Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
           E+Y   ++ LEPGEAI      L  +V+DI +N + + I+D+S  AH+PD L      +I
Sbjct: 246 ERYCNIEVILEPGEAIGWQCGFLLASVIDIIKNDQEIAILDTSFSAHMPDCLEMPYRPSI 305

Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
                             N G ++  + G +CLAGD  G F F+ P+K GD+I F+D+  
Sbjct: 306 LKISIENDGELIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFDTPLKRGDKILFKDMLH 365

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y I + N FNGI +P++A  +  G  K ++ FSY DY N 
Sbjct: 366 YTIVKNNSFNGIPLPSLAKIDEQG-FKILKNFSYEDYKNR 404


>gi|317180096|dbj|BAJ57882.1| diaminopimelate decarboxylase [Helicobacter pylori F32]
          Length = 405

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 70/385 (18%), Positives = 124/385 (32%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP+YL D  K+           K     +  ALK  +   +   L +   G    S+ E
Sbjct: 12  KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAKLESGADCVSIGE 71

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++   K        +  N   +   +  +L   +  AQ L  K  
Sbjct: 72  IYRALKAGIKPYRIVFSGVGKSEFEIEQALKLNILFLNVESFMELQTIEKIAQSLGIKAR 131

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           +  RINP++              ++ G   K+ +E       S       + FH   +  
Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPISVHFHIGSQLL 191

Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224
                      +  I K        + +  +GGGI  + ++       D+ QR+    + 
Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQRILNALQG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I  EPG +IV  +  L T VL       K  VIVD+ +   +   L + + A    
Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVI 311

Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       V G  C + D F +      ++ GD++  E V  Y  +  + +N    
Sbjct: 312 TPSKGRKISPCDVVGPVCESSDTFLKGVHLPELEPGDKLVIEKVGAYGSSMASQYNSRPK 371

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
                          +  +  D + 
Sbjct: 372 LLELALEDHQIRVIRKREALEDLWR 396


>gi|307262007|ref|ZP_07543662.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|306868290|gb|EFN00112.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
          Length = 416

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 60/386 (15%), Positives = 113/386 (29%), Gaps = 25/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +   + + + +   G    S  E
Sbjct: 26  GTPAYIYSRATLERHWHAFDKAFGAHPHLICFAVKSNSNIALLNVMVRLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117
           +              ++   K       A+          ++++L++  + A +      
Sbjct: 86  LERVLAAGGEPSKVVFSGVAKSHSEIQRALEVGIRCFNIESIAELHRINEVAGQSGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G       E            + G+  H   +  
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVTQAREVYRLAKTLPNVKITGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
               F         + ++      ++  + LGGG+             +  K   EK   
Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGIELHHLDLGGGLGVPYNGEEPPHPTEYAKALLEKLKG 265

Query: 228 ----QIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
               +I LEPG AI  N   L T V  +     +N  IVD+ +   +   L         
Sbjct: 266 YADLEIILEPGRAITANAGILVTKVEYLKANEDRNFAIVDTGMNDMIRPALYEAYMQITE 325

Query: 283 PNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +           V G  C   D  G+      ++ GD I+      Y     + +N   
Sbjct: 326 VDQSLSREKAVYDVVGPICETSDFLGKDRELA-IEQGDLIAMRSAGAYGAAMSSTYNSRP 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364
                + + D         S+ D + 
Sbjct: 385 QAVEIMVDGDQAYLIKARASFADLWR 410


>gi|256820962|ref|YP_003142241.1| diaminopimelate decarboxylase [Capnocytophaga ochracea DSM 7271]
 gi|256582545|gb|ACU93680.1| diaminopimelate decarboxylase [Capnocytophaga ochracea DSM 7271]
          Length = 398

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 57/385 (14%), Positives = 111/385 (28%), Gaps = 27/385 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            +P Y+ D QK+ +  +       +   +++  A+K  +   +   +     G  + S+ 
Sbjct: 14  GSPVYVYDAQKIASQYNRLTNAFASVPKLRINYAMKALSNISILKLMKDLGAGLDTVSIQ 73

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           EV LG    F  +   +       +  +  +     +  + +S L +F    Q     + 
Sbjct: 74  EVQLGLLAGFDPQQIIFTPNGVSMDEIEEAMRLGVQLNIDNLSFLEQFGT--QHPEIPVC 131

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFL 173
           +RINP V              S+ G                  ++NG+  H   +     
Sbjct: 132 IRINPHVMAGGNSNISVGHIDSKFGISIHQIPHILRIVENTKMHINGIHMHTGSDILDID 191

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
            F    + I  E       +++I  G G     K+  ++   + L E           E 
Sbjct: 192 VFLYAAE-ILFETAKHFKDLQFIDFGSGFKVPYKEGDIQTNIEELGERLSSRFADFCKEY 250

Query: 234 GE----------AIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLY--QESAT 280
           G            +V+        V  + +        +DS     +             
Sbjct: 251 GRNLTLAFEPGKFLVSEAGYFLVKVNVVKQTTSTVFAGIDSGFNHLIRPMFYGANHYIEN 310

Query: 281 IYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
           I    G      V G  C   D F        +  GD + F +   Y     + +N    
Sbjct: 311 ISNPEGKNRFYSVVGYICET-DTFASNRQIAEITEGDILCFHNAGAYCYTMASNYNSRLR 369

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
           P   +          +  ++ D   
Sbjct: 370 PAEVLWQNGEAKLIRKAETFEDLLR 394


>gi|189347052|ref|YP_001943581.1| diaminopimelate decarboxylase [Chlorobium limicola DSM 245]
 gi|189341199|gb|ACD90602.1| diaminopimelate decarboxylase [Chlorobium limicola DSM 245]
          Length = 417

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 66/386 (17%), Positives = 121/386 (31%), Gaps = 23/386 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++  K+ L  +L        +       ++K      +  TL     G   +S  E
Sbjct: 29  GTPLFVTSKRSLEGSLREFEAAFASLPHITCYSVKANFNLSVISTLAGMGCGCDVNSGGE 88

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +          E   +       +    A+ +    +   ++S+L   +  A  + L   
Sbjct: 89  LFRALKAGVSPEKIIFAGVGKKPEEIAFALEAGVLMLKVESLSELEAIERIAAEKGLTAP 148

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG-------EKCKDKIESEIKNVNGLMFHNNCENK 170
           + LRINP+V+              + G       E        +   +  L  H   +  
Sbjct: 149 VALRINPNVTAETHPYITTGDSKEKFGIDEAGLEEAFSLLRRMKHVRLVCLDMHIGSQIF 208

Query: 171 SFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               + A    +   F         IE++ +GGG   T        P+  F ++L     
Sbjct: 209 DPEYYVAATAVLLDIFETARSLGFSIEYLDIGGGFPVTYDARKPATPITYFAEKLMPLLA 268

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
              V +  EPG  +V N + L + +L    +   K   IVD+ +   +   L        
Sbjct: 269 AAGVPVIFEPGRFLVANASVLLSRILYKKTNHTGKQFYIVDAGMTELIRPALYQSHHEVL 328

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
           T+  +     A V G  C + D F           G+ ++      Y     + +NG   
Sbjct: 329 TVIRHEKTVVADVVGPVCESSDFFARQRTIDDAAEGELLAVMSSGAYAAVMSSNYNGRLR 388

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365
           P   + +        R  +Y     N
Sbjct: 389 PAEVMVDGQEVTVIRRRETYEQLIAN 414


>gi|72162824|ref|YP_290481.1| diaminopimelate decarboxylase [Thermobifida fusca YX]
 gi|71916556|gb|AAZ56458.1| diaminopimelate decarboxylase [Thermobifida fusca YX]
          Length = 461

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 56/398 (14%), Positives = 116/398 (29%), Gaps = 38/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ID+              ++A   +  A K      +   + +        +  E
Sbjct: 62  GTPLYVIDEADFRARARDYRLAFEDAD--VYYAGKALLTKAVARWVAEEGLKLDVCTGGE 119

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           + +     F  E    +   K       AV      II ++  ++++ +  A  +    +
Sbjct: 120 LAVALAAGFPPERIGMHGNNKSAAELARAVEVGVGRIIIDSFDEIDRLERIAAERGRVPE 179

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G         E  +  + S    + GL  H   +
Sbjct: 180 VLIRVTTGVEAHTHEFVATAHDDQKFGLSLSNGAAAEAVRRLLTSPHLRLVGLHSHIGSQ 239

Query: 169 NKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKE 220
                 F    + +              +  + LGGG+             K     L+ 
Sbjct: 240 IFDTAGFEVAARRLSTFLTQIYAEHGISLPELDLGGGLGIAYLPDDDPLDPKSIADSLRS 299

Query: 221 FSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271
             E           +I +EPG AI          V  + +       V     +  ++  
Sbjct: 300 IVEHECAAQNLPVPRIAVEPGRAIAGPAGITLYEVGTVKDVEGIRTYVSVDGGMSDNIRT 359

Query: 272 YLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326
            L   E   +  +      P  + + G+ C +GDI     +    ++ GD ++      Y
Sbjct: 360 ALYGAEYTCVLASRHSDAEPMLSRLVGKHCESGDIVVRDLYLPADLRPGDLVAVAATGAY 419

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N +  P +           +R  +  D   
Sbjct: 420 CYSMASNYNHVPRPAVVAVREKNARVLVRRETEEDLLR 457


>gi|332286107|ref|YP_004418018.1| diaminopimelate decarboxylase [Pusillimonas sp. T7-7]
 gi|330430060|gb|AEC21394.1| diaminopimelate decarboxylase [Pusillimonas sp. T7-7]
          Length = 420

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 63/387 (16%), Positives = 117/387 (30%), Gaps = 26/387 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +Q L +  +      +   V +   +K  +   + +       G    S  E
Sbjct: 29  GTPLYVYSRQALHDAWEAYRIASEGRDVLVCYGMKANSNLAVLNEFKNLGTGFDIVSGGE 88

Query: 63  VMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +              ++   K       A+ +        + ++L +    AQ + K   
Sbjct: 89  LARVLAVGADPAKVVFSGVGKQVWEMQAALEAGVKCFNVESEAELTRLAQVAQDMGKVAP 148

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           + LR+NP V              ++ G   +  IE   +        + G+  H   +  
Sbjct: 149 VSLRVNPDVDAQTHPYISTGLKENKFGIAIEKAIEVYQRAATLPSLSIVGVDCHIGSQIT 208

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
               +   L     + +        ++ + LGGGI     D         L +  +    
Sbjct: 209 EVSPYLDALDKLIVLIQTLASHNIHLKHLDLGGGIGIRYTDEQPLTPSDLLDKVFQTLGR 268

Query: 228 Q------IYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQES-- 278
                  I LEPG ++V N   L T V  +  +  KN  IVD+++   V   L       
Sbjct: 269 HQLDHLQIVLEPGRSLVGNAGVLLTQVEYLKHSEAKNFAIVDAAMNDLVRPTLYDAWHSV 328

Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
            A      G     + G  C +GD          ++ GD ++      Y     + +N  
Sbjct: 329 EAVKPRQQGDTLYDIVGPICESGDWLARDRKL-TLQQGDLLAIMSAGAYAFTMASQYNTR 387

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
                 + + D              Y 
Sbjct: 388 PRAAEVMVDGDTAHLVRPREPLESLYA 414


>gi|319651413|ref|ZP_08005542.1| diaminopimelate decarboxylase [Bacillus sp. 2_A_57_CT2]
 gi|317396944|gb|EFV77653.1| diaminopimelate decarboxylase [Bacillus sp. 2_A_57_CT2]
          Length = 439

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 62/399 (15%), Positives = 125/399 (31%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   +              G+K  +  A K F+   M   +++        S 
Sbjct: 30  GTPLYVYDVALIRERARGFKQTFDKLGIKAQVAYASKAFSTVAMVQLVDEEGLSLDVVSG 89

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+       F  E   ++   K  E   +   +    I+ +   +L   ++  + L   
Sbjct: 90  GELYTALAADFPPERIHFHGNNKSREELEMALKNQVGCIVVDNFYELELLEEICESLAAR 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
            KI LR+ P +           +  S+ G   ++          + S      GL  H  
Sbjct: 150 TKILLRVTPGIEAHTHDYILTGQEDSKFGFDLQNGQAETALQKALNSSWIETLGLHCHIG 209

Query: 167 CEN----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ------ 216
            +        L    + + + +       +   ++LGGG      +              
Sbjct: 210 SQIFDTTGFILAAKKIFEKMAEWKEKHAYEPIVLNLGGGFGIRYTEDDDPIHASQYVEEI 269

Query: 217 --RLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269
              +K+ +E YS+++   ++EPG ++V +  T         E         VD  +  ++
Sbjct: 270 IGEVKKQAEHYSMKMPEIWIEPGRSLVGDAGTTLYQTGSRKEVPNVRNYLAVDGGMSDNI 329

Query: 270 PDYLLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   +  N        T  + G+ C +GD+             D ++      
Sbjct: 330 RPALYQAKYEAVLANRVLDKPEETVSIAGKCCESGDMLIWDLPLPKAGDQDLLAVFCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  N +N I  P +           ++  +Y D   
Sbjct: 390 YGYSMANNYNRIPRPPVVFIENGEAKLVVKRETYEDILR 428


>gi|332672809|gb|AEE69626.1| carboxynorspermidine decarboxylase [Helicobacter pylori 83]
          Length = 405

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 138/400 (34%), Positives = 210/400 (52%), Gaps = 38/400 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y+++ ++L  N      +R+ +G K+LLALK +A W  F  L Q ++G  +S LY
Sbjct: 7   IPTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66

Query: 62  EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112
           E  L  E+FGG     E   Y+ A+K+ E+ A+L    +IIFN+  Q     ++  DK +
Sbjct: 67  EAKLAFEEFGGRESQKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNK 126

Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162
           +L        K+GLRINP  S     + +P    SRLG    +  +   ++    V+GL 
Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKVSRLGIVPSEFEKGVKEHGLEGVSGLH 186

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
           FH +CE          L+++EK F  ++  + W++ GGG H T  DY V    Q +K+F 
Sbjct: 187 FHTHCEQN-ADALCRTLEHVEKHFKPYLENVAWVNFGGGHHITRSDYDVNLLIQTIKDFK 245

Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
           E+Y   ++ LEPGEAI      L  +V+DI +N + + I+D+S  AH+PD L      +I
Sbjct: 246 ERYHNIEVILEPGEAIGWQCGFLIASVIDIVKNDQEIAILDASFSAHMPDCLEMPYRPSI 305

Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
                             N G ++  + G +CLAGD  G F FE P+K GD+I F+D+  
Sbjct: 306 LKISVENDEELIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFEAPLKRGDKIVFQDMLH 365

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y I + N FNG+ +P++A  +  G  K ++ FSY DY N 
Sbjct: 366 YTIVKNNSFNGVPLPSLARLDQQG-FKILKNFSYEDYKNR 404


>gi|20089611|ref|NP_615686.1| diaminopimelate decarboxylase [Methanosarcina acetivorans C2A]
 gi|19914530|gb|AAM04166.1| diaminopimelate decarboxylase [Methanosarcina acetivorans C2A]
          Length = 420

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 67/392 (17%), Positives = 121/392 (30%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+++ D++ +  N        K+  G K   A+K      +   L +   G   SSL 
Sbjct: 21  PTPFHIYDEKAIRENARRMKSAFKDVPGFKEFFAVKALPNPFILKILKEEGFGADCSSLP 80

Query: 62  EVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           E++L       G+   ++      E  A        I         + +KA  L + +  
Sbjct: 81  ELILAEKAGMTGDDIMFSSNDTPAEEFAKAKELGGFINLDDISHIHYLEKAAGLPEIVCF 140

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFHNNCENK------ 170
           R NP        +       ++ G   +   E       K V     H    +       
Sbjct: 141 RYNPGPLKEGNAIIGKP-EEAKYGFTREQMFEGYRVLRDKGVKRFGMHTMVASNELNSDY 199

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY 230
                  + + I +       Q E+++LGGGI    +        + + +  ++      
Sbjct: 200 FVETARILFELIVEISKELGIQFEFVNLGGGIGIPYRPEQEPVSLEAVAKGVKEAYNATI 259

Query: 231 -----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA 279
                      LE G  I      L + V  +    K+ V +DS +   +   +      
Sbjct: 260 TANGLAPLKVYLECGRIITGPYGYLVSQVRHLKSTYKDYVGMDSCMSNLMRPGMYGAYHH 319

Query: 280 TIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                       +   V G  C   D F        V++GD +   D   +       +N
Sbjct: 320 ITVLGKENKPPVHKYDVTGSLCENNDKFAIDRMLPEVEVGDILVIHDTGAHGHAMGFNYN 379

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           G       +   DG++  IR   +  DY+  L
Sbjct: 380 GKLRSAELLLREDGSVVQIRRAETIEDYFATL 411


>gi|319407825|emb|CBI81478.1| Diaminopimelate decarboxylase [Bartonella sp. 1-1C]
          Length = 423

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 65/387 (16%), Positives = 115/387 (29%), Gaps = 25/387 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y    + L+ N +      ++    +  A+K  +   +   L +   G    S  
Sbjct: 25  VGTPFYCYSARTLITNFENYQQAFQDMPSLIAYAVKANSNQAILRLLARSGAGADVVSEG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116
           E+              Y+   K  +    A+  N       +  +L +   +A  L    
Sbjct: 85  ELRRALAAGIPAHRIIYSGVGKTVKEIDFALTQNIHCFNVESEPELEQLSARAAALSTTA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
            I LRINP V           +  ++ G       E   K        + G+  H   + 
Sbjct: 145 PISLRINPDVDAKTHKKITTGKSENKFGIPLSSAREVYKKAAQLPSLYICGVDIHIGSQI 204

Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPV-----KDFCQRLKEF 221
                F                    I  + +GGG+               D+   +++ 
Sbjct: 205 CDLKPFEDAFLITADFVRQLWNDGYTITHVDIGGGLGIPYGSEHHSVPSPFDYAALVRKH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                + I LEPG +IV     L T+V+ +     +N VIVD+++   +   L       
Sbjct: 265 IAPLGINIILEPGRSIVGEAGILVTSVIHLKRGKERNFVIVDAAMNDFIRPTLYEAWQNV 324

Query: 281 IYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
           +       T    A + G  C  GD  G       +  GD +       Y     N +N 
Sbjct: 325 LLVKEKIDTPLINADIVGPVCETGDYLGLNRSLPLLSKGDLLVVTGAGAYGAVMSNTYNS 384

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYY 363
             +    +              Y    
Sbjct: 385 RLLIPEVLVQDMRYAIIRPRLDYAQLI 411


>gi|332673135|gb|AEE69952.1| diaminopimelate decarboxylase [Helicobacter pylori 83]
          Length = 405

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 70/385 (18%), Positives = 124/385 (32%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP+YL D  K+           K     +  ALK  +   +   L +   G    S+ E
Sbjct: 12  KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAKLESGADCVSIGE 71

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++   K        +  N   +   +  +L   +  AQ L  K  
Sbjct: 72  IYRALKAGIKPYRIVFSGVGKSGFEIEQALKLNILFLNVESFMELQTIEKIAQSLGIKAR 131

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           +  RINP++              ++ G   K+ +E       S       + FH   +  
Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPISVHFHIGSQLL 191

Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224
                      +  I K        + +  +GGGI  + ++       D+ QR+    + 
Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQRILNALQG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I  EPG +IV  +  L T VL       K  VIVD+ +   +   L + + A    
Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVI 311

Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       V G  C + D F +      ++ GD++  E V  Y  +  + +N    
Sbjct: 312 TPSKGRKISPCDVVGPVCESSDTFLKGVHLPELEPGDKLVIEKVGAYGSSMASQYNSRPK 371

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
                          +  +  D + 
Sbjct: 372 LLELALEDHQIRVIRKREALEDLWR 396


>gi|319406349|emb|CBI79988.1| Diaminopimelate decarboxylase [Bartonella sp. AR 15-3]
          Length = 424

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 67/388 (17%), Positives = 115/388 (29%), Gaps = 26/388 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y    + L+ N +      +N    +  A+K  +   +   L Q   G    S  
Sbjct: 25  VGTPFYCYSARTLITNFENYQQAFQNMPYLIAYAVKANSNQAILRLLAQSGAGADVVSEG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+              Y+   K  +    A+  N       +  +L +   +A  L    
Sbjct: 85  ELRRALAAGIPTHRIVYSGVGKTVKEIDFALTQNIHCFNVESEPELEQLSARAVALSTTA 144

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
              LRINP V           +  ++ G       E   K        V G+  H   + 
Sbjct: 145 RISLRINPDVDAKTHKKITTGKSENKFGIPLSSAREVYKKAAQLPGLYVCGVDIHIGSQI 204

Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPV-----KDFCQRLKEF 221
                F                    I  + +GGG+  +            D+   +++ 
Sbjct: 205 CDLTPFEDAFLITADFVRQLWNDGYAITHVDIGGGLGISYGSEHYSVPSPFDYAALVRKH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                + I LEPG +IV     L T+V+ +     +N VIVD+++   +   L       
Sbjct: 265 IAPLGINIILEPGRSIVGEAGILVTSVIHLKRGKERNFVIVDAAMNDFIRPTLYEAWQNV 324

Query: 281 IYPNTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +     P       A + G  C  GD  G       +  GD +       Y     N +N
Sbjct: 325 LLVKEKPIDTLLINADIVGPVCETGDYLGLNRSLPILSTGDLLVITGAGAYGAVMSNTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY 363
              +    +              Y    
Sbjct: 385 SRLLIPEVLVQDAHYAVIRPRLDYGQLI 412


>gi|116754057|ref|YP_843175.1| diaminopimelate decarboxylase [Methanosaeta thermophila PT]
 gi|116665508|gb|ABK14535.1| diaminopimelate decarboxylase [Methanosaeta thermophila PT]
          Length = 440

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 74/383 (19%), Positives = 126/383 (32%), Gaps = 32/383 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  + +L  N+                A+K      +   L Q   G    S  E
Sbjct: 43  GTPVYVTSEDRLRENIRRYHRAF--PDADKYFAVKANGNISIIRILAQEGAGADVFSAGE 100

Query: 63  VMLGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKI 118
           + L        E   +N    +D E+   +++   +  ++  +L      A  +  + +I
Sbjct: 101 LYLARLAGVPRERILFNGNSKRDEELRMAVTSGVRVSIDSEEELESLSRIASEESKNVEI 160

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCENKS 171
             R+NP +S +           S+ G          +  +  +     GL  H   +   
Sbjct: 161 LFRVNPDISVNTHPKIATGLKSSKFGIPAQSVRSICEKAMHMDGIKPIGLHCHIGSQILD 220

Query: 172 FLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDF-----CQRLKEFSE 223
              FS     +    G        +E + LGGG+                    +    E
Sbjct: 221 VSSFSEAAARMMDLVGEIVDIGGDMELLDLGGGLGIQYDPAAPPAPSPEDLANAVLPVIE 280

Query: 224 KYSVQI------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
           + S ++       LEPG +IV +TT L T V  +       V VD+         L    
Sbjct: 281 RRSEELGVRLKLILEPGRSIVADTTILLTGVNVVKRAHVTFVGVDAGFNVLARPMLYDAY 340

Query: 278 SATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
              +  N           V G  C +GD+         VK GD ++F D   Y  +  + 
Sbjct: 341 HYIVVANRADAEISERYTVVGPICESGDVLARNRALPVVKKGDILAFLDAGAYGFSMSSQ 400

Query: 334 FNGINMPTIAVKNVDGTIKAIRE 356
           +NG   P   +   DG ++ IR+
Sbjct: 401 YNGQPRPAEVLVR-DGEVELIRK 422


>gi|294339197|emb|CAZ87551.1| Diaminopimelate decarboxylase (DAP decarboxylase ) [Thiomonas sp.
           3As]
          Length = 430

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 64/389 (16%), Positives = 120/389 (30%), Gaps = 28/389 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLL--LALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+  +  +           + + V +    A+K  +   +   L +   G    S 
Sbjct: 37  GTPTYVYSRASIEEAAQRYSQAAQASSVHVALRYAVKANSNLAVLQLLARLGWGFDIVSA 96

Query: 61  YEVMLGHEKFG--GETHAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       G  G+     V    D    A+    +     + S+L      AQ   K 
Sbjct: 97  GELKRVLAAGGEAGKVVFSGVGKSADDMRFALDVGVECFNVESPSELAALNRVAQAAGKV 156

Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCE 168
               LR+NP V              ++ G       +        E   + G+  H   +
Sbjct: 157 ARVALRVNPDVDAGTHPYISTGLKTNKFGISQDQAAQLALQTAQLEQVQLVGIACHIGSQ 216

Query: 169 NKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
             +   +   L    ++ ++  H   +IE I LGGG+     D       + L     + 
Sbjct: 217 ITTVEPYLDALDKVLDLVEQMEHKGAKIEHIDLGGGLGIRYTDETPPTPQEWLSPLLARI 276

Query: 226 ------SVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQES 278
                    + +EPG +IV N   L T  L +    +K+  +VD+ +   +   L   E 
Sbjct: 277 SARGFGHRTVVIEPGRSIVGNAGVLLTRTLFLKSTPVKHFAVVDAGMNDLIRPALYSAEQ 336

Query: 279 ATIYPNTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           A +             + G  C + D          ++ GD ++      Y +   + +N
Sbjct: 337 AVVLAEQREGSALKYDIVGPVCESADWLARDRALV-LEEGDLLAILSSGAYGMVMASNYN 395

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
               P   + +           +    Y 
Sbjct: 396 SRGRPAEVMIDGATATLIRPRETPEQLYA 424


>gi|317181634|dbj|BAJ59418.1| diaminopimelate decarboxylase [Helicobacter pylori F57]
          Length = 405

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 69/385 (17%), Positives = 123/385 (31%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP+YL D  K+           K     +  ALK  +   +   L +   G    S+ E
Sbjct: 12  KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAKLESGADCVSIGE 71

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++   K        +  N   +   +  +L   +  AQ L  K  
Sbjct: 72  IYRALKAGIKPYRIVFSGVGKSGFEIEQALKLNILFLNVESFMELQTIEKIAQSLGIKAR 131

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           +  RINP++              ++ G   K+ +E       S       + FH   +  
Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPISVHFHIGSQLL 191

Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP---VKDFCQRLKEFSEK 224
                      +  I K        + +  +GGGI  + ++       D+ QR+    + 
Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKFYDYAQRILNALQG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I  EPG +IV  +  L   VL       K  VIVD+ +   +   L + + A    
Sbjct: 252 LDLTIICEPGRSIVAESGELIMQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVI 311

Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       V G  C + D F +      ++ GD++  E V  Y  +  + +N    
Sbjct: 312 TPSKGRKISPCDVVGPVCESSDTFLKGVHLPELEAGDKLVIEKVGAYGSSMASQYNSRPK 371

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
                          +  +  D + 
Sbjct: 372 LLELALEDHQIRVIRKREALEDLWR 396


>gi|317177106|dbj|BAJ54895.1| diaminopimelate decarboxylase [Helicobacter pylori F16]
          Length = 405

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 69/385 (17%), Positives = 123/385 (31%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP+YL D  K+           K     +  ALK  +   +   L +   G    S+ E
Sbjct: 12  KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAKLESGADCVSIGE 71

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++   K        +  N   +   +  +L   +  AQ L  K  
Sbjct: 72  IHRALKAGIKPYRIVFSGVGKSGFEIEQALKLNILFLNVESFMELTTIEKIAQSLGIKAR 131

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           +  RINP++              ++ G   K+ +E       S       + FH   +  
Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPISVHFHIGSQLL 191

Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224
                      +  I K        + +  +GGGI  + ++       D+ QR+    + 
Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQRILNALQG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I  EPG +IV  +  L   VL       K  VIVD+ +   +   L + + A    
Sbjct: 252 LDLTIICEPGRSIVAESGELIMQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVI 311

Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       V G  C + D F +      ++ GD++  E V  Y  +  + +N    
Sbjct: 312 TPSKGRKISPCDVVGPVCESSDTFLKGVHLPELEPGDKLVIEKVGAYGSSMASQYNSRPK 371

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
                          +  +  D + 
Sbjct: 372 LLELALEDHQIRVIRKREALEDLWR 396


>gi|311030741|ref|ZP_07708831.1| diaminopimelate decarboxylase [Bacillus sp. m3-13]
          Length = 441

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 58/399 (14%), Positives = 120/399 (30%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   +           KN GVK  +  A K F++  MF  + +        S 
Sbjct: 30  GTPLYVYDVALIRERSRDFQTTFKNLGVKAQVAYASKAFSSVAMFQLIKEEGLSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F  +   ++   K  E   +        ++ +   +L   +D        
Sbjct: 90  GELYTALVADFPVDRIHFHGNNKSVEELEMAVEKKIGCVVVDNFLELTLLQDICKKHGYT 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
             I LR+ P ++          +  S+ G   +             +   ++ G+  H  
Sbjct: 150 MPILLRVTPGINAHTHDYILTGQEDSKFGFDLQSGQAHEAMKIASNATHLDLLGIHCHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFCQR----- 217
            +      F      +      +      +   ++LGGG      +              
Sbjct: 210 SQIFETTGFKLAAGKLFDTLKEWNEQEGFEARVVNLGGGFGIRYTEEDNPLPASVYVEEI 269

Query: 218 ---LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269
              ++ F + +     +I++EPG ++V +  T   +V    E         +D  +  ++
Sbjct: 270 ITDVQSFVKDHGLKMPEIWIEPGRSLVGDAGTTIYSVGSKKEIPNIRHYLAIDGGMTDNI 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   +      +       + G+ C +GD+             D ++      
Sbjct: 330 RPALYQAKYEAVLANRVEDEADDKVSIAGKCCESGDMLIWDLPLPKANHEDYLAVFCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y     N +N I  P +           IR  ++ D   
Sbjct: 390 YGYAMANNYNRITKPAVVFVEDGEVQLVIRRETFEDLVR 428


>gi|310823824|ref|YP_003956182.1| diaminopimelate decarboxylase [Stigmatella aurantiaca DW4/3-1]
 gi|309396896|gb|ADO74355.1| Diaminopimelate decarboxylase [Stigmatella aurantiaca DW4/3-1]
          Length = 413

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 55/386 (14%), Positives = 115/386 (29%), Gaps = 22/386 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+  +  L  +          +   +  ++K  +   +         G    S  
Sbjct: 25  VGTPTYVYSQAALTGHFQVLDKAFGESPHLICYSVKANSTLAVLGLFAGMGSGFDIVSGG 84

Query: 62  EV---MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E+          G    A     ++    A+ +        +  +L       ++     
Sbjct: 85  ELARVRQARGDMGKTVFAGVGKTQEEMARALAAGILLFNVESAEELEALDAVGRQAGRRA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCEN 169
             GLR+NP V              S+ G   ++ +    +          G+  H   + 
Sbjct: 145 PFGLRVNPDVDARTHRYISTGLKTSKFGVPFEEAVALYARARKMKGVRALGVDCHIGSQL 204

Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSE 223
                  A L  +   +         +E++ +GGG+  T  D      +++ + + E  +
Sbjct: 205 TRTAPVKAALSKVAGLYAELKAQGHPLEYLDIGGGLGITYADETPPSPQEYARTVLEVVK 264

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES---A 279
               ++ LEPG ++V N   L T VL   +   K  V+VD+ +   +   L         
Sbjct: 265 GTGARLILEPGRSLVGNAGVLLTRVLYRKQAPAKTFVVVDAGMNDLIRPALYEAHHALLP 324

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            +          V G  C + D+          + G   +      Y ++  + +N    
Sbjct: 325 VVKQRGKAVEVDVVGPVCESTDVLARARPLVLPRQGALFAVMSAGAYGMSMASTYNSRPR 384

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365
           P   +                D +  
Sbjct: 385 PAEVLVEGTAWRVVRERERDEDLWRR 410


>gi|115372602|ref|ZP_01459909.1| diaminopimelate decarboxylase [Stigmatella aurantiaca DW4/3-1]
 gi|115370323|gb|EAU69251.1| diaminopimelate decarboxylase [Stigmatella aurantiaca DW4/3-1]
          Length = 457

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 55/386 (14%), Positives = 115/386 (29%), Gaps = 22/386 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+  +  L  +          +   +  ++K  +   +         G    S  
Sbjct: 69  VGTPTYVYSQAALTGHFQVLDKAFGESPHLICYSVKANSTLAVLGLFAGMGSGFDIVSGG 128

Query: 62  EV---MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E+          G    A     ++    A+ +        +  +L       ++     
Sbjct: 129 ELARVRQARGDMGKTVFAGVGKTQEEMARALAAGILLFNVESAEELEALDAVGRQAGRRA 188

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCEN 169
             GLR+NP V              S+ G   ++ +    +          G+  H   + 
Sbjct: 189 PFGLRVNPDVDARTHRYISTGLKTSKFGVPFEEAVALYARARKMKGVRALGVDCHIGSQL 248

Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSE 223
                  A L  +   +         +E++ +GGG+  T  D      +++ + + E  +
Sbjct: 249 TRTAPVKAALSKVAGLYAELKAQGHPLEYLDIGGGLGITYADETPPSPQEYARTVLEVVK 308

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES---A 279
               ++ LEPG ++V N   L T VL   +   K  V+VD+ +   +   L         
Sbjct: 309 GTGARLILEPGRSLVGNAGVLLTRVLYRKQAPAKTFVVVDAGMNDLIRPALYEAHHALLP 368

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            +          V G  C + D+          + G   +      Y ++  + +N    
Sbjct: 369 VVKQRGKAVEVDVVGPVCESTDVLARARPLVLPRQGALFAVMSAGAYGMSMASTYNSRPR 428

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365
           P   +                D +  
Sbjct: 429 PAEVLVEGTAWRVVRERERDEDLWRR 454


>gi|120601731|ref|YP_966131.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris DP4]
 gi|120561960|gb|ABM27704.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris DP4]
          Length = 421

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 53/388 (13%), Positives = 107/388 (27%), Gaps = 29/388 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+  +  L         +  + G ++  + K  +   +   + +      + S  E
Sbjct: 28  GSPLYVYSEAILRQRCREMKALSSHPGFRVNYSAKANSNLALLHIIREEGLVVDAMSPGE 87

Query: 63  V-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTII-FNTVSQLNKFKDKAQKLHKKIGL 120
           + M     F  +   Y       E      +   ++  +++SQL+ + +       ++ +
Sbjct: 88  LFMNLRAGFSPDQILYVCNNVSAEELGNAVSHGLLVSVDSLSQLDLYGEV--NPGGRVMV 145

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVNGLMFHNNCENKSFLCFS 176
           R NP +              ++ G       E        N+     + +  +      S
Sbjct: 146 RFNPGIGAGHHKKVVTAGKETKFGVDPASIDEVRTILARHNLTLAGINQHIGSLFLEPES 205

Query: 177 A-MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE------------FSE 223
                            +E I  GGG       Y  +                       
Sbjct: 206 YVEAARFLLTLAERFDDVEVIDFGGGFGIPYHKYDSQRRLDLAAMGAQFDDLISGWAHRR 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
            Y  +  +EPG  +V     L  +V  +        V  D          +         
Sbjct: 266 GYRGRFLVEPGRYVVAECGLLLGSVHSVKSNGANRYVGTDLGFNVLARPVMYDAHHDIEV 325

Query: 283 PNTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                          V G  C +GDI  +     PV+ GD +   D   Y     + +N 
Sbjct: 326 YREDGEPSGLLLPQTVVGNICESGDIIAKNRPLPPVEEGDILGVLDAGAYGYVMSSSYNQ 385

Query: 337 INMPTIAVKNVDGT-IKAIREFSYNDYY 363
              P   + +++G      R  + +D  
Sbjct: 386 RMRPAEVLIDLEGRPRLVRRRETLDDLV 413


>gi|295133498|ref|YP_003584174.1| diaminopimelate decarboxylase [Zunongwangia profunda SM-A87]
 gi|294981513|gb|ADF51978.1| diaminopimelate decarboxylase [Zunongwangia profunda SM-A87]
          Length = 407

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 56/385 (14%), Positives = 115/385 (29%), Gaps = 27/385 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            +P Y+ D +K+            +   +++  A+K  +   +   +++   G  + S+ 
Sbjct: 14  GSPVYVYDAEKIEAQYKRLTSAFSSIKKLRIHYAVKALSNISILKFIDKLGSGLDTVSIQ 73

Query: 62  EVMLG-HEKFGGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           EV LG           +       E    +      I  + +S L +F   ++     + 
Sbjct: 74  EVQLGIKAGVDPSKIIFTPNGVSLEEIEKVAKLGVQINIDNLSILEQFG--SRHPKTPVC 131

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKSFL 173
           +RINP V              S+ G            +E+    +NG+  H   +     
Sbjct: 132 IRINPHVMAGGNSKISVGHIDSKFGISIHQMPLLKRIVENTGMTINGIHMHTGSDILDIQ 191

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY--- 230
            F    + I  +       +E+I  G G     K+  ++   + L     +         
Sbjct: 192 VFIQASE-ILFDAAKNFKNLEFIDFGSGFKVPYKEGDIETDIEELGTKLSEKFKAFCTEY 250

Query: 231 -------LEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIY 282
                   EPG+ +V+ +      V  I +        +D+     +             
Sbjct: 251 GKELTLAFEPGKYLVSESGKFLAKVNVIKQTTSTVFAGIDTGFNHLIRPMFYGSHHEINN 310

Query: 283 PNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            +          V G  C   D F        +  GD ++F +   Y  +  + FN    
Sbjct: 311 ISNSNGKQRFYSVVGYICET-DTFASNRRITEITEGDILAFSNAGAYCYSMSSNFNSRFR 369

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
           P   +             +++D   
Sbjct: 370 PAEVLWYKGEAHLIRERETFDDLLR 394


>gi|322513198|ref|ZP_08066326.1| diaminopimelate decarboxylase [Actinobacillus ureae ATCC 25976]
 gi|322121029|gb|EFX92862.1| diaminopimelate decarboxylase [Actinobacillus ureae ATCC 25976]
          Length = 416

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 63/390 (16%), Positives = 115/390 (29%), Gaps = 27/390 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  +   + + + +   G    S  E
Sbjct: 26  GTPAYIYSRATLERHWHAFDKAFGSHPHLICFAVKSNSNIALLNVMARLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +              ++   K       A+          ++++L++  + A +L K   
Sbjct: 86  LERVLAAGGDPSKVVFSGVAKSHSEIQRALEVGIRCFNIESIAELHRINEVAGQLGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G       E            + G+  H   +  
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVNQAREVYLLAKSLPNVKITGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
               F         +  +      ++  + LGGG+             +  K   EK   
Sbjct: 206 ELQPFLDATDRLIVLMDQLKEDGIELHHLDLGGGLGVPYNGEEPPHPTEYAKALLEKLKG 265

Query: 228 ----QIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
               +I LEPG AI  N   L T V  +     +N  IVD+ +   +   L         
Sbjct: 266 YADLEIILEPGRAITANAGILVTKVEYLKANEDRNFAIVDTGMNDMIRPALYEAYMQITE 325

Query: 283 PNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +           V G  C   D  G+      ++ GD I+      Y     + +N   
Sbjct: 326 VDQSLVREKTVYDVVGPICETSDFLGKGRELA-IEQGDLIAMRSAGAYGAAMSSTYNSRP 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDY--YNNL 366
                + + D         S+ D      L
Sbjct: 385 QAVEIMVDSDLAHLIKARASFADLWRLERL 414


>gi|257085239|ref|ZP_05579600.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis Fly1]
 gi|256993269|gb|EEU80571.1| diaminopimelate decarboxylase lysA [Enterococcus faecalis Fly1]
          Length = 436

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 59/397 (14%), Positives = 129/397 (32%), Gaps = 37/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP ++ D   +              G+K  ++ A K F+   ++  L +        S 
Sbjct: 35  GTPLFVYDVAHIRAQARGFKQTLNQLGIKNKVVYASKAFSCLAIYQVLKEEDIACDVVSG 94

Query: 61  YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDK--AQKLH 115
            E+    +      E   +       E+   L N   TI+ +   +++  ++    +   
Sbjct: 95  GELFTALKGGMEPAEIEFHGNNKTPEELRYALDNKIGTIVIDNFYEIDLLEELLATRNQT 154

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           +K+  R++P V           +  S+ G         E     + +   +V G+  H  
Sbjct: 155 QKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASGQATEALVRLLSNPSFDVQGVHCHIG 214

Query: 167 CENKSFLCFSAMLKNIEKEFGHFI----TQIEWISLGGGIHFTDKDYPVK----DFCQRL 218
            +  +   F A ++ +      +          +++GGG                F +++
Sbjct: 215 SQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLNMGGGFGVQYTQQDEPLAPATFVEKI 274

Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
               + +         ++++EPG +++    T   TV    E    ++ V VD  +  ++
Sbjct: 275 VYSLKDHCEQLGYPLPELWIEPGRSLIAEAGTTIYTVGAQKEVPGVRHFVSVDGGMGDNI 334

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L         A    +       V G+ C +GD+         VK GD ++      
Sbjct: 335 RPALYQAVYDGFLANRDGHDSIKKVTVVGKYCESGDVLLRDILLPEVKAGDLLAISSTGA 394

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
           Y  +  + +N    P +            R  ++ D 
Sbjct: 395 YGYSMASNYNRNPRPAVVFVEDGQAKLVARRETHEDM 431


>gi|240947851|ref|ZP_04752291.1| Diaminopimelate decarboxylase [Actinobacillus minor NM305]
 gi|240297813|gb|EER48249.1| Diaminopimelate decarboxylase [Actinobacillus minor NM305]
          Length = 416

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 60/386 (15%), Positives = 116/386 (30%), Gaps = 25/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  +   + + + +   G    S  E
Sbjct: 26  GTPAYIYSRATLERHWHAFDNAFGDHPHLICFAVKSNSNIALLNIMARLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +              ++   K     A             ++S+L++  + A +L K   
Sbjct: 86  LERVLAAGGDPSKVVFSGVAKSHAEIARALEVGIRCFNVESISELHRINEVAGQLGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G   +                + G+  H   +  
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVQQAREVYRLASHLPNVKITGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F         + ++      ++  + LGGG+          +P +     L++  +
Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGIRLHHLDLGGGLGVPYHGEEPPHPTEYAKALLEKLKD 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESATIY 282
              ++I LEPG AI  N   L T V  +  N      IVD+ +   +   L         
Sbjct: 266 YQDLEIILEPGRAITANAGILVTKVEYLKTNEDRRFAIVDTGMNDMIRPALYEAYMELTE 325

Query: 283 PN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +           V G  C   D  G+      +  GD I+      Y     + +N   
Sbjct: 326 VDRSLSREKAVYDVVGPICETSDFLGKQRELA-IAEGDLIAMRSAGAYGATMSSTYNSRP 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364
                + +           S+ D + 
Sbjct: 385 QAVEIMVDSANYYLIKARASFEDLWR 410


>gi|209883910|ref|YP_002287767.1| diaminopimelate decarboxylase [Oligotropha carboxidovorans OM5]
 gi|209872106|gb|ACI91902.1| diaminopimelate decarboxylase [Oligotropha carboxidovorans OM5]
          Length = 422

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 58/383 (15%), Positives = 112/383 (29%), Gaps = 29/383 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +              +  A+K  +   +  TL +   G    S  
Sbjct: 25  LGTPFYCYSTATLERHYRVFTEAFAGVDTLVCYAMKANSNQSVLRTLARLGAGADVVSGG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+M         +   ++   K       A+  N   I   +  +L+     A +  +  
Sbjct: 85  ELMRARAAGIPADKIVFSGVGKTEGELRQALAENILCINVESEPELDLLSRVADETGQVA 144

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
              LR+NP +           +  ++ G           +        + G+  H   + 
Sbjct: 145 RVSLRLNPDIGAGGHAKISTGKSENKFGIPLSRARGVYARAAKLPGIRLTGVDMHIGSQI 204

Query: 170 KSFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEF 221
                  A         +        I+ I  GGG+    +           + + +K  
Sbjct: 205 TDLAPLEAAFALLVDFVRTLRADGHAIDHIDFGGGLGIPYESDLPVPPTPAAYAEVVKRV 264

Query: 222 SEKY-SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESA 279
           +      ++  EPG  IV N   L + V+ +     +N VI+D+++   +    LY+   
Sbjct: 265 TRGLDDCRLLFEPGRMIVGNAGILVSRVIYVKHGEGRNFVIIDAAMNDLIRPT-LYEAHH 323

Query: 280 TIYPNTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
            I P            A V G  C  GD          +  GD ++      Y   +   
Sbjct: 324 DILPVREAAPNDPSLVADVVGPVCETGDYLALGRRLPALAAGDLVAVMSSGAYGAVQAGT 383

Query: 334 FNGINMPTIAVKNVDGTIKAIRE 356
           +N   +    +            
Sbjct: 384 YNTRPLVPEVLVKGGDYAVVRPR 406


>gi|317008940|gb|ADU79520.1| diaminopimelate decarboxylase [Helicobacter pylori India7]
          Length = 405

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 68/385 (17%), Positives = 123/385 (31%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP+YL D  K+           K     +  ALK  +   +   L     G    S+ E
Sbjct: 12  KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGE 71

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++   K        +  N   +   +  +L   +  AQ L  K  
Sbjct: 72  IHRALKAGIKPYRIVFSGVGKSESEIEQALKLNILFLNVESFMELQTIEKIAQSLGIKAR 131

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           +  RINP++              ++ G   K+ +E       S       + FH   +  
Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPISVHFHIGSQLL 191

Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224
                      +  I K        + +  +GGGI  + ++       D+ Q +    + 
Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILNALQG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I  EPG +IV  +  L T VL       K  V+VD+ +   +   L + + A    
Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVVVDAGMNDFLRPSLYHAKHAIRVI 311

Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       V G  C + D F +      ++ GD+++ E V  Y  +  + +N    
Sbjct: 312 TPSKGRKISPCDVVGPVCESSDTFLKDVHLPELEPGDKLAIEKVGAYGSSMASQYNSRPK 371

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
                          +  +  D + 
Sbjct: 372 LLELALEDHKIRVIRKREALEDLWR 396


>gi|228472782|ref|ZP_04057540.1| diaminopimelate decarboxylase [Capnocytophaga gingivalis ATCC
           33624]
 gi|228275833|gb|EEK14599.1| diaminopimelate decarboxylase [Capnocytophaga gingivalis ATCC
           33624]
          Length = 401

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 61/384 (15%), Positives = 119/384 (30%), Gaps = 27/384 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           P Y+ D  K+ +  +  +        +++  A+K  +   +   + +   G  + S+ EV
Sbjct: 16  PVYVYDAYKIRSQYERLIKAFAAVPSLRINYAMKALSNGSILKLMRKLGAGLDTVSIQEV 75

Query: 64  MLGH-EKFGGETHAYNVAYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            LG    F  E   +       E  +   S    +  + +S L +F  K       + +R
Sbjct: 76  KLGLHAGFAPEQIIFTPNGVSMEEIEEAASLGVQLNIDNLSILEQFGSK--HPQVPVCIR 133

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKSFLCF 175
           INP V              S+ G            +E+   ++NG+  H   +      F
Sbjct: 134 INPHVMAGGNSKISVGHIDSKFGISIHQVPHILRIVENTKMHINGIHMHTGSDILDIDVF 193

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY----- 230
               + I  +      ++++I  G G     K+  ++   + L E   +  ++       
Sbjct: 194 LYAAE-ILFDAAKHFRELKFIDFGSGFKVPYKEGDIQTDIEELGEKLSQRFLEFCKLYGK 252

Query: 231 -----LEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQES--ATIY 282
                 EPG+ +V+        V  + +        +DS     +             I 
Sbjct: 253 DLTLAFEPGKFLVSEAGFFLVKVNVVKQTTSTVFAGIDSGFNHLIRPMFYGATHFIENIS 312

Query: 283 PNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
              G      V G  C   D F        +  GD + F +   Y     + +N    P 
Sbjct: 313 NPEGKKRFYSVVGYICET-DTFASNRQIAEISEGDILCFRNAGAYCYTMASNYNSRPRPA 371

Query: 342 IAVKNVDGTIKAIREFSYNDYYNN 365
             +          +  +  D   N
Sbjct: 372 EVLWIDGQAKLIRKAETLEDLLRN 395


>gi|159039562|ref|YP_001538815.1| diaminopimelate decarboxylase [Salinispora arenicola CNS-205]
 gi|157918397|gb|ABV99824.1| diaminopimelate decarboxylase [Salinispora arenicola CNS-205]
          Length = 470

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 61/407 (14%), Positives = 124/407 (30%), Gaps = 47/407 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D++ L                 +  A K F    +   + +        S  E
Sbjct: 62  GTPVYVLDEEDLRTRCRDFRAAFPTED--VYYAGKAFLCRAVVRMIAEEGLHLDVCSGGE 119

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117
           +          E   ++   K       A+ +    II ++  ++++    A++  +  +
Sbjct: 120 LATALAAGMPPERIGFHGNNKSVAELSRALDAGVGRIIVDSSHEIDRLTGLARERGVRPR 179

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G               ++ ++  + GL  H   +
Sbjct: 180 VLVRVTVGVEAHTHEFIATAHEDQKFGFSLAGGAAIAAVLRILDEDVLELRGLHSHIGSQ 239

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF----CQRLKE 220
                 F      +L    +       Q+  + LGGG                  +RL++
Sbjct: 240 IFDASGFEVSARRVLALQAQIRDARGVQLPELDLGGGFGIAYTTQDDPATPADLAKRLRK 299

Query: 221 FSEKYS-------VQIYLEPGEAIVTNTTTLNTTVL-----------DISENIKNLVIVD 262
             +            + +EPG AIV         V            D ++  +  V VD
Sbjct: 300 IVDGECAAERLAVPHLSIEPGRAIVGPAMFTLYEVGTVKSVPVGAGGDTADGHRCYVSVD 359

Query: 263 SSVEAHVP----DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDR 317
             +  ++     D       A+      P  A V G+ C +GDI  +  F    V+ GD 
Sbjct: 360 GGMSDNIRTALYDASYSATVASRASGAAPVLARVVGKHCESGDIVVKDEFLPADVQPGDL 419

Query: 318 ISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           ++      Y  +  + +N +  P +           +R  +  D   
Sbjct: 420 VAVPGTGAYCRSMASNYNHVLRPPVVAVRDGQARLIVRRETEEDLLA 466


>gi|326336124|ref|ZP_08202296.1| diaminopimelate decarboxylase [Capnocytophaga sp. oral taxon 338
           str. F0234]
 gi|325691633|gb|EGD33600.1| diaminopimelate decarboxylase [Capnocytophaga sp. oral taxon 338
           str. F0234]
          Length = 401

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 61/384 (15%), Positives = 118/384 (30%), Gaps = 27/384 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           P Y+ D  K+ +          +   +++  A+K  +   +   + +   G  + S+ EV
Sbjct: 16  PVYVYDADKITSQYKRLTKAFDHVPSLRINYAMKALSNVSILKLMRKLGAGLDTVSIQEV 75

Query: 64  MLGH-EKFGGETHAYNVAYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            LG    F  E   +       E  +   S    +  + +S L +F  K    +  + +R
Sbjct: 76  KLGLHAGFTPEQIIFTPNGVSIEEIEEAASLGVQLNIDNLSILEQFGSK--HPNIPVCIR 133

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFLCF 175
           INP V              S+ G                  ++NG+  H   +      F
Sbjct: 134 INPHVMAGGNSKISVGHIDSKFGISIHQIPHILRIVENTKMHINGIHMHTGSDILDIDVF 193

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY----- 230
               + I  +   +  ++++I  G G     K+  V+   + L E      ++       
Sbjct: 194 LYAAE-ILFDTAKYFRELQFIDFGSGFKIPYKEGDVQTNIEELGEKLSNRFLEFCKLYGR 252

Query: 231 -----LEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLY--QESATIY 282
                 EPG+ +V+        V  I +        +DS     +             + 
Sbjct: 253 NLTLAFEPGKFLVSEAGFFLVKVNVIKQTTSTVFAEIDSGFNHLIRPMFYGAIHFIENLS 312

Query: 283 PNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
              G      V G  C   D F        +  GD + F +   Y     + +N    P 
Sbjct: 313 NPEGKKRFYSVVGYICET-DTFASNRQIAEISEGDILCFRNAGAYCYTMASNYNSRPRPA 371

Query: 342 IAVKNVDGTIKAIREFSYNDYYNN 365
             +          +  ++ D  +N
Sbjct: 372 EVLWIGGQAKLIRKAETFEDLLHN 395


>gi|187935097|ref|YP_001887472.1| diaminopimelate decarboxylase [Clostridium botulinum B str. Eklund
           17B]
 gi|187723250|gb|ACD24471.1| diaminopimelate decarboxylase [Clostridium botulinum B str. Eklund
           17B]
          Length = 431

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 68/400 (17%), Positives = 131/400 (32%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++D+  +  N +      K  N+  ++  A K F    M   +N+        S 
Sbjct: 29  GTPLYVMDEGLIRQNCNEYYKYFKCDNSSNRVAYAGKAFLTLEMCKIINEENLSLDVVSG 88

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+ + H+  F  +   ++   K  +     V       + +   ++ +    A      
Sbjct: 89  GELFIAHKSGFPLDKVMFHGNNKTLDEIELGVKLGVGRFVVDNYYEMEELNRIAASYNKI 148

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG-----EKCKDKIES----EIKNVNGLMFHNN 166
           +K+ LRI P +           +  S+ G        +D I          ++GL  H  
Sbjct: 149 QKVFLRITPGIEAHTHEYIKTGQVDSKFGFAPVGNMIEDAINKSINLPNIELSGLHCHIG 208

Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKD----FCQRL 218
            +      +   ++ +              I+ + LGGG                +C+ +
Sbjct: 209 SQIFEIEPYEDAVEIMLGLIKKIKQNTGYLIKELDLGGGFGIYYNRGDKPKTTKEYCEAI 268

Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               ++           + +EPG +IV N+     TV  I +       V     +  ++
Sbjct: 269 LNKVDEVCSRTGLSKPSLIIEPGRSIVGNSGITLYTVGSIKDIPGVRKYVSVDGGMSDNI 328

Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L + E   +  N        T  +CG+ C +GDI          +  D +S      
Sbjct: 329 RPALYHAEYECMLANKVEKDLKETVTICGKCCESGDILLNDVNISTPQSNDILSVMTTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P + +   +      R  +Y D   N
Sbjct: 389 YGYSMSNNYNKIPRPPVVMVKDNKERLICRRETYEDLIQN 428


>gi|158523325|gb|ABW70801.1| diaminopimelate decarboxylase [Helicobacter pylori]
          Length = 405

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 70/385 (18%), Positives = 123/385 (31%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP+YL D  K+           K     +  ALK  +   +   L     G    S+ E
Sbjct: 12  KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGE 71

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++   K        +  N   +   +  +L   +  AQ L  K  
Sbjct: 72  IQRALKAGIKPYRIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIETIAQSLGIKAR 131

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           +  RINP++              ++ G   K+ +E       S       + FH   +  
Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHFHIGSQLL 191

Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224
                      +  I K        + +  +GGGI  + ++       D+ Q +    + 
Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILNALQG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I  EPG +IV  +  L T VL       K  VIVD+ +   +   L + + A    
Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVI 311

Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       V G  C + D F +      ++ GD+I+ E V  Y  +  + +N    
Sbjct: 312 TPSKGREISPCDVVGPVCESSDTFLKDAHLPELEPGDKIAIEKVGAYGSSMASQYNSRPK 371

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
                          +  +  D + 
Sbjct: 372 LLELALEDHKIRVIRKREALEDLWR 396


>gi|261208139|ref|ZP_05922814.1| diaminopimelate decarboxylase [Enterococcus faecium TC 6]
 gi|289566337|ref|ZP_06446766.1| diaminopimelate decarboxylase [Enterococcus faecium D344SRF]
 gi|294614568|ref|ZP_06694473.1| diaminopimelate decarboxylase [Enterococcus faecium E1636]
 gi|260077723|gb|EEW65439.1| diaminopimelate decarboxylase [Enterococcus faecium TC 6]
 gi|289161846|gb|EFD09717.1| diaminopimelate decarboxylase [Enterococcus faecium D344SRF]
 gi|291592549|gb|EFF24153.1| diaminopimelate decarboxylase [Enterococcus faecium E1636]
          Length = 419

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 66/394 (16%), Positives = 131/394 (33%), Gaps = 33/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           KTP Y+ D++K+   + +       K    K+L A K F    M   + +Y  G    S 
Sbjct: 19  KTPLYVYDEEKMRQTMLSFKRGFVSKRFDTKVLYASKAFQTIEMLYLVREYGFGLDVVSG 78

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKK 117
            E+    +  F  +T  ++   K  E        D   I+ + + ++    + +Q+  KK
Sbjct: 79  GEIYTALQADFPRDTIYFHGNNKTPEELIYALENDLLHIVADNLMEVELLAELSQRYLKK 138

Query: 118 IGLRINPSVS--YSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
           I + +  +V                S+ G   +            ES    + G   H  
Sbjct: 139 ICIMLRLNVGVEAHTHEYIVTAHIDSKFGMSYESKECQQALQLIKESSYLELEGFHAHIG 198

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226
            +      + A +  +      F   +  ++LGGG              +   +   +Y+
Sbjct: 199 SQIFDVTAWLAEIDKLTNYLTDFDQPLS-LNLGGGFGIRYTQNDQPIPVEEALKKLIEYT 257

Query: 227 -----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL 274
                       Q+ +EPG +IV    T   T+  I +         D  +  ++   L 
Sbjct: 258 EEALEKRKLTIRQLLIEPGRSIVGEAGTTLYTIGFIKKTPHKKYYFVDGGMTDNIRPALY 317

Query: 275 YQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
             E     A            + G+ C +GD+  +  +    + GD ++      Y  + 
Sbjct: 318 QAEYDCDLAAKLSEEKTEKVTIAGKMCESGDVVIKEAYLPKAESGDLLAVYSTGAYGYSM 377

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            + +N    P +   N   +   +R  +++D   
Sbjct: 378 SSNYNRATRPAVVFVNNGQSRLIVRRQAFSDLLR 411


>gi|284043252|ref|YP_003393592.1| diaminopimelate decarboxylase [Conexibacter woesei DSM 14684]
 gi|283947473|gb|ADB50217.1| diaminopimelate decarboxylase [Conexibacter woesei DSM 14684]
          Length = 423

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 60/389 (15%), Positives = 130/389 (33%), Gaps = 31/389 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP +++ +  +       +   +       +L A K F    ++  L +       +S 
Sbjct: 38  GTPAFVVAEDDICARARAYVEALRARHDDFDVLFASKAFPCTAVYRVLAEEGLVCDVASG 97

Query: 61  YEVMLG-HEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+ L     F  +    +   K       A+ +    I+ ++   +++ +  A  + + 
Sbjct: 98  GELHLALRGGFDAKRIYLHGNAKSLAELEQAIDAGVGHIVLDSFMDVDRVEQVAAARGVT 157

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCE 168
           + + +R+ P V+          +  S+ G    D   +  +       ++ GL  H   +
Sbjct: 158 QAVLIRVTPGVAGRTHAKISTGQADSKFGFGLDDARLAIERLRGSDSLDLVGLHMHIGSQ 217

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
             S   +   ++ +       +      + GGG+             +   E   +   +
Sbjct: 218 LLSLDAYRPAVEALAA-----LGDFSTYNFGGGLGVAYTAGQQPPAIEEYVEEKVRALHE 272

Query: 229 IY-------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
           +        +EPG ++V N+T    +V  +  N+   V VD  +  ++   L        
Sbjct: 273 LIGTGKRLLIEPGRSLVANSTVTLYSVETVKRNVSTWVGVDGGMSDNLRPMLYGSVYEAF 332

Query: 282 YPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
           + +         TA V G+ C +GD+          K GD +       Y     N +NG
Sbjct: 333 FADRPELAGSGETAHVAGKHCESGDVIVRDVPLADPKPGDILVTPATGAYGHAMANNYNG 392

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           I  P +           +R  +Y+D    
Sbjct: 393 IPRPPVIFCKDGDARVVVRRETYDDLARR 421


>gi|317179814|dbj|BAJ57600.1| carboxynorspermidine decarboxylase [Helicobacter pylori F32]
          Length = 405

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 137/400 (34%), Positives = 211/400 (52%), Gaps = 38/400 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y+++ ++L  N      +R+ +G K+LLALK +A W  F  L Q ++G  +S LY
Sbjct: 7   IPTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66

Query: 62  EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112
           E  L  E+FGG     E   Y+ A+K+ E+ A+L    +IIFN+  Q     ++  DK +
Sbjct: 67  EAKLAFEEFGGRESQKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNK 126

Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162
           +L        K+GLRINP  S    ++ +P    SRLG    +  +   ++    V+GL 
Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPVIYNPCSKVSRLGIVPSEFEKGVKEHGLEGVSGLH 186

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
           FH +CE          L+++E+ F  ++  + W++ GGG H T  DY V    Q +K+F 
Sbjct: 187 FHTHCEQN-ADALCRTLEHVERHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQTIKDFK 245

Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
           E+Y   ++ LEPGEAI      L  +V+DI +N + + I+D+S  AH+PD L      +I
Sbjct: 246 ERYHNIEVVLEPGEAIGWQCGFLIASVIDIVQNDQEIAILDASFSAHMPDCLEMPYRPSI 305

Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
                             N G ++  + G +CLAGD  G F FE P+K GD+I F+D+  
Sbjct: 306 LKISVENDEELVEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGDKIVFQDMLH 365

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y I + N FNG+ +P++A  +  G  K ++ FSY DY N 
Sbjct: 366 YTIVKNNSFNGVPLPSLARLDQQG-FKILKNFSYEDYKNR 404


>gi|295696434|ref|YP_003589672.1| diaminopimelate decarboxylase [Bacillus tusciae DSM 2912]
 gi|295412036|gb|ADG06528.1| diaminopimelate decarboxylase [Bacillus tusciae DSM 2912]
          Length = 444

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 57/399 (14%), Positives = 110/399 (27%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D+  L           + AG   ++  A K F    M   + +        S 
Sbjct: 30  GTPLYVFDEVLLRETCREFHAAFRKAGLRYQVAYAGKAFCTQAMCRLVEEEGLHLDVVSA 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKA--QKLH 115
            E+       F  E    +   K  +             + +   +L+   + A  Q   
Sbjct: 90  GELHTALTAGFPPEKIHLHGNNKSRDELIYGLRAGIGGFVVDNFYELDLLAELAERQGKR 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNN 166
             I LR+ P V           +  ++ G                 +   N+ GL  H  
Sbjct: 150 PNILLRVTPGVEAHTHEYIQTGQQDTKFGFDLASGQAEAAVRRAQRARGVNLVGLHCHIG 209

Query: 167 CENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            +      F      M++   +    +   +  +++GGG      +       +      
Sbjct: 210 SQIFETEGFVLAVERMMEFYARAVNEWGASLRILNVGGGFGIRYVEEDRPLPVEAYIAAI 269

Query: 223 EKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
                           ++++EPG  I     T   TV    E    +  + VD  +  + 
Sbjct: 270 ADAVKGEALRRGVAVPEVWVEPGRRIAGPAGTTLYTVGARKEIPGVRRYIAVDGGMADNP 329

Query: 270 PDYLLYQESATIYPNTGPYTAM----VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              +       +  N           V G+ C  GD+            GD ++      
Sbjct: 330 RPIIYQARYEAVVANRAGEPVEELAAVAGKFCETGDMLIWDTPLARAVPGDILAVFGTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  + +N    P +           +R  + +D   
Sbjct: 390 YTYSMASNYNRAPRPAVVFVRDGRADVVVRRETLDDLIR 428


>gi|110597928|ref|ZP_01386210.1| diaminopimelate decarboxylase [Chlorobium ferrooxidans DSM 13031]
 gi|110340505|gb|EAT58991.1| diaminopimelate decarboxylase [Chlorobium ferrooxidans DSM 13031]
          Length = 409

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 61/386 (15%), Positives = 121/386 (31%), Gaps = 23/386 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++   + L  +     +   +       ++K      +  T  +   G   +S  E
Sbjct: 21  GTPLFVTSAKSLAGSHRAFEHAFADLPHFTCYSVKANYNLSVIRTFAELGCGCDVNSGGE 80

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH--KK 117
           +          E   +       +    A+ S    +   ++S+L      A +L     
Sbjct: 81  LFRALTAGVAAEKIIFAGVGKKPEEIAYALKSGVLMLKAESLSELRAINRIAGELELIAN 140

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170
           + +RINP+V+              + G    +         +     + GL  H   +  
Sbjct: 141 VAIRINPNVTAETHPYITTGDSKEKFGIDEAELPAVFALLPQLRNLCLLGLDMHIGSQIF 200

Query: 171 SFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               + A    +   F         +E++ +GGG   T        P+  F ++L    +
Sbjct: 201 DPEYYVAATTKLLDIFSASKEMGFGVEFLDIGGGFPVTYDPLKPATPIAHFAEKLIPMLK 260

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
              V +  EPG + V N + L T +L    +   K   +VD+ +   +   L       +
Sbjct: 261 PAGVTVIFEPGRSFVANASVLLTRILYKKRNHTGKEFFVVDAGMTELIRPALYQAHHEIL 320

Query: 282 YPNTGPYTA--MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
              +   +    V G  C + D F         + G+ ++      Y     + +NG   
Sbjct: 321 AVTSHEQSVVADVVGPVCESSDFFARHREIDAAEEGELLAVMSAGAYAAVMGSNYNGRLR 380

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365
           P   + N        +  SY     N
Sbjct: 381 PAEVLVNGSDVKLIRKRESYEQLIQN 406


>gi|329571373|gb|EGG53060.1| diaminopimelate decarboxylase [Enterococcus faecalis TX1467]
          Length = 436

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 60/397 (15%), Positives = 129/397 (32%), Gaps = 37/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP ++ D   +              G+K  ++ A K F+   ++  L +        S 
Sbjct: 35  GTPLFVYDVAHICAQARGFKQTLNQLGIKNKVVYASKAFSCLAIYQVLKEEDIACDVVSG 94

Query: 61  YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDK--AQKLH 115
            E+    +      E   +       E+   L N   TI+ +   +++  ++    +   
Sbjct: 95  GELFTALKGGMEPAEIEFHGNNKTPEELRYALDNKIGTIVIDNFYEIDLLEELLTTRNQT 154

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           +K+  R++P V           +  S+ G         E     + +   +V G+  H  
Sbjct: 155 QKVLFRVSPGVDAETHDYILTGQEDSKFGFDVASGQATEALVRLLSNPSFDVQGVHCHIG 214

Query: 167 CENKSFLCFSAMLKNIEKEFGHFI----TQIEWISLGGGIHFTDKDYPVK----DFCQRL 218
            +  +   F A ++ +      +          +++GGG                F +++
Sbjct: 215 SQIFAVEGFLAAVEKMFTILEDWRQVHQFTARVLNMGGGFGVQYTQQDEPLAPATFVEKI 274

Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
               + +         ++++EPG +++    T   TV    E    ++ V VD  +  ++
Sbjct: 275 VYSLKGHCEQLGYPLPELWIEPGRSLIAEAGTTIYTVGAQKEVPGVRHFVSVDGGMGDNI 334

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L         A    +       V G+ C +GD+         VK GD ++      
Sbjct: 335 RPALYQAVYDGFLANREGHDSVKKVTVVGKYCESGDVLLRDILLPEVKAGDLLAISSTGA 394

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
           Y  +  + +N    P +            R  +Y D 
Sbjct: 395 YGYSMASNYNRNPRPAVVFVEDGQAKLVARRETYEDM 431


>gi|117924389|ref|YP_865006.1| Orn/DAP/Arg decarboxylase 2 [Magnetococcus sp. MC-1]
 gi|117608145|gb|ABK43600.1| carboxynorspermidine decarboxylase [Magnetococcus sp. MC-1]
          Length = 390

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 117/345 (33%), Positives = 176/345 (51%), Gaps = 7/345 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTP +++D   L  N +    +   +G  LLLALK FA    F  L  ++ G  +SSL+
Sbjct: 40  VKTPCHILDGATLTKNGEILADVAARSGATLLLALKAFAQPECFKFLKGHLHGVAASSLH 99

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  LG E FGGE H Y  AY   E+D +  +   I+FN+ +Q  ++K + Q     +G+R
Sbjct: 100 EARLGQEHFGGELHTYAPAYLPDEMDYIAQHATHIVFNSFNQWRRYKGQLQGSQASVGMR 159

Query: 122 INPSVSYSK--FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           INP  S     F   DP +P SR+G          ++ + GL FH  C        +  L
Sbjct: 160 INPERSTRGGDFDSCDPCQPGSRMGVPLALFEADAMEGIEGLHFHTLCMQG-PAALARTL 218

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
           + +E  FGH   +++WI+ GGG   T  +Y  +   Q +K+F  K+ + + LEPG  +V 
Sbjct: 219 EAVEARFGHVFHKLKWINFGGGHLITHPNYDRERLIQLIKDFRAKHGLAVTLEPGAGVVF 278

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGR 295
           NT  +   V DI       VI+D S  AHV D L      TI+         +T  + G 
Sbjct: 279 NTDVVVAQVQDIIHTATPNVILDLSAAAHVTDVLDLGWRPTIWGAGREGEYAHTYRLGGH 338

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
           SCL+GD FG + F +P++IG ++ F D+A Y + +   FNG+ +P
Sbjct: 339 SCLSGDYFGLYSFPEPLQIGQKLVFLDMAHYTLVKMTTFNGLALP 383


>gi|163869282|ref|YP_001610538.1| hypothetical protein Btr_2591 [Bartonella tribocorum CIP 105476]
 gi|161018985|emb|CAK02543.1| Diaminopimelate decarboxylase [Bartonella tribocorum CIP 105476]
          Length = 424

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 65/387 (16%), Positives = 111/387 (28%), Gaps = 26/387 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L+          +     +  A+K  +   +   L     G    S  
Sbjct: 25  VGTPFYCYSANALVTRFKDYQKAFQGMPTLIAYAVKANSNQAILRLLAANGAGADVVSEG 84

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+              Y+   K       A+  N       +  +L +   +A  L K  
Sbjct: 85  ELRRALAVGIPAHRIVYSGVGKTVREIDFALSQNIYCFNVESEPELEQLSQRAVALSKTA 144

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
              LRINP V           +  ++ G       E+  K        V G+  H   + 
Sbjct: 145 RVSLRINPDVDAKTHKKITTGKSENKFGIPLFLAREAYKKAASLPGLQVCGIDMHIGSQI 204

Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPV-----KDFCQRLKEF 221
                F      I             I  I +GGG+               D+   +K+ 
Sbjct: 205 CDLKPFEEAFLLIADCVRQLWSDGCAITHIDIGGGLGIAYGCEQHTLPSPFDYAALVKKH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                + I +EPG +IV     L T+VL + +   +N VIVD+++   +   L       
Sbjct: 265 IAPLGIDIVVEPGRSIVGQAGVLVTSVLYLKKGQGRNFVIVDAAMNDLMRPTLYDAWQNV 324

Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +             A + G  C  GD          +  GD ++      Y     + +N
Sbjct: 325 VLVKQAAKDAPLIRADIVGSVCETGDYLALDRCLPILAPGDLLAITQAGAYGAVMASTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDY 362
              +    +              Y   
Sbjct: 385 SRLLIPEVLVQDTRYAVIRPRLDYAQL 411


>gi|307594424|ref|YP_003900741.1| diaminopimelate decarboxylase [Vulcanisaeta distributa DSM 14429]
 gi|307549625|gb|ADN49690.1| diaminopimelate decarboxylase [Vulcanisaeta distributa DSM 14429]
          Length = 400

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 59/377 (15%), Positives = 110/377 (29%), Gaps = 19/377 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP  + D  ++  N           G ++L ++K      +   L +   G  ++S  E
Sbjct: 20  GTPLIVYDLGRVEENYRVIKEA---TGARVLYSIKANPNLAILTFLRKLGSGADAASPGE 76

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           + L     F      Y  A++        +       F++  +  +      K       
Sbjct: 77  IFLALKAGFEPGNILYTGAFRSINDIKYGIDAGVIFNFDSRREFERALSLGYKPKTAF-F 135

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSFLC 174
           R++                 S+ G    D +E+     +      G+             
Sbjct: 136 RVDLGYGRGFAPGVVLAGEESKFGMFLDDAVEAYRLARDVGVGEFGIHAMMGSNVLDADY 195

Query: 175 FSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY 230
           F  + + +++           +I +  +GGG     +         RL      +  +++
Sbjct: 196 FIKIAELLKEYAEAIEDRVGIRIRYFDMGGGFGIPYRPDEKPLDLGRLGVLRNFFPGELW 255

Query: 231 LEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESATIYP--NTGP 287
           +EPG  IV N   L T V ++     +  V VD  +   +   L       I    N   
Sbjct: 256 VEPGRFIVGNAGYLVTRVTEVKRKGGRTFVGVDVGMNVLIRPMLYGAYHHIITCSNNEER 315

Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
               V G  C   D          V+ GD +   +   Y  +    +NG   P   V   
Sbjct: 316 EVVDVVGPICENTDKLAIGRELPRVREGDLLIILNAGAYVYSMSGNYNGRPRPAEVVVYG 375

Query: 348 DGTIKAIREFSYNDYYN 364
           +    A    S      
Sbjct: 376 NEYGIARFRESLESLVA 392


>gi|300812246|ref|ZP_07092684.1| diaminopimelate decarboxylase [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300496760|gb|EFK31844.1| diaminopimelate decarboxylase [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|325686042|gb|EGD28100.1| diaminopimelate decarboxylase [Lactobacillus delbrueckii subsp.
           lactis DSM 20072]
          Length = 436

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 58/400 (14%), Positives = 127/400 (31%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           +TP  + D  K+   +     + +  GV  ++  A K F+   ++  +N+    T   S 
Sbjct: 31  QTPLQVFDVGKIRQAIRAFKRVFEEEGVDYEVSYASKAFSCLAIYQVINEEGGHTDVVSG 90

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F  +  +++   K      +        II +   +++        +   
Sbjct: 91  GELWTAMKAGFPMDKVSFHGNNKSRAELEMAVDQGVGVIILDNFHEIDLLSQILEEKDAS 150

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNN 166
            K+ LR+ P +S          +  S+ G            +  + +    + G+  H  
Sbjct: 151 SKVMLRVTPGISAHTNEYIQTGQVDSKFGFDMESGQADRALELVLANPRMKMAGIHAHIG 210

Query: 167 CENKSFLCFSAM----LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR----- 217
            +      F        +        +  + + +++GGG      D       +      
Sbjct: 211 SQIFDVRGFVGCADKLCQLASAWKEKYGYETDILNVGGGFGIHYTDQDQPLPAEEFVRAI 270

Query: 218 ---LKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
              +K   ++ +     I++EPG +IV        TV    +       V     +  ++
Sbjct: 271 VKEVKSKCQENNLKLPAIWIEPGRSIVGPAGFSLYTVGSRKDLPGYPSYVALDGGMGDNI 330

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   E + +              + G+ C +GDI  +       + GD ++      
Sbjct: 331 RPALYQAEYSAVVADRPQAEDEERVNLVGKYCESGDILIKSCPLPKTEPGDVVALLSTGA 390

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  + +N    P +           I+  SY+D   N
Sbjct: 391 YGYSMASNYNRNPRPAVVFAEDGVDQLVIKRESYDDLIAN 430


>gi|222151302|ref|YP_002560458.1| diaminopimelate decarboxylase [Macrococcus caseolyticus JCSC5402]
 gi|222120427|dbj|BAH17762.1| diaminopimelate decarboxylase [Macrococcus caseolyticus JCSC5402]
          Length = 423

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 68/396 (17%), Positives = 133/396 (33%), Gaps = 33/396 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP ++ D+ ++ N         K +G    +  A K F +  +F+ +++   G    S 
Sbjct: 25  GTPLFIYDEDEIRNQCRRFHRALKASGLNYTISYASKAFTSVQLFNLMHEEDMGLDVVSE 84

Query: 61  YEVMLGHEK--FGGETHAYNVAYKDCEIDAVLS-NCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    +      + H +     D EI   +    +  + +++ ++ +  D A  L + 
Sbjct: 85  GELYTALKSKVSASKMHFHGNNKTDREIKYAIESGVEYFVIDSLDEIERINDIAHSLGQT 144

Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           +   LRINP V           +  S+ G         E  +    +      G+ FH  
Sbjct: 145 VKAVLRINPGVEAHTHEFIQTGQEDSKFGLSIRHGLAIEGVRQIEAASHIEFKGVHFHIG 204

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF--------CQRL 218
            +          ++ +          I+ +++GGG         +            + L
Sbjct: 205 SQIFESTGTIKTIELVINWLTQHKIDIDILNIGGGFSIKYTSEDISYPIEEGIKRIAETL 264

Query: 219 KEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYL 273
           K   +K+S     I LEPG +IV         V  + E       V     +  H+   L
Sbjct: 265 KNECKKHSYPVPEISLEPGRSIVGEAGITVYEVGTVKEIPDTNCYVSIDGGMSDHIRTAL 324

Query: 274 LYQESATIYPNT---GPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNIN 329
              +   +  +          V G+ C +GDI          +K GD +  +    Y+ +
Sbjct: 325 YNAKYELLLADRYEIHDKEVTVAGKLCESGDIIMRNIMLPSSIKRGDLLVVKATGAYHYS 384

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
             + +N +  P +     D   + I+  S      N
Sbjct: 385 MSSNYNQMLKPAVVFVTKDNVREVIKRQSLEHLIAN 420


>gi|315586009|gb|ADU40390.1| carboxynorspermidine decarboxylase [Helicobacter pylori 35A]
          Length = 405

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 133/400 (33%), Positives = 206/400 (51%), Gaps = 38/400 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y+++ ++L  N      + + +G K+LLALK +A W  F  L Q ++G  +S LY
Sbjct: 7   IPTPCYVLESERLEKNAKILEIVCQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66

Query: 62  EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
           E  L  E+FGG     E   Y+ A+K+ E+  +L    +IIFN+  Q   +KD     +K
Sbjct: 67  EAKLAFEEFGGRESQKEICVYSPAFKEAEMSTILPLATSIIFNSFYQYATYKDMVLGKNK 126

Query: 117 K----------IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162
           +          +GLRINP  S     + +P    SRLG    +  +   ++    V+GL 
Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKVSRLGITPSEFEKGVREHGLEGVSGLH 186

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
           FH +CE          L+++E+ F  ++  + W++ GGG H T  DY V    Q +K+F 
Sbjct: 187 FHTHCEQN-ADALCRTLEHVERHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQTIKDFK 245

Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
           E+Y   ++ LEPGEAI      L  +V+DI +N + + I+D+S  AH+PD L      +I
Sbjct: 246 ERYHNIEVVLEPGEAIGWQCGFLIASVIDIVKNDREIAILDASFSAHMPDCLEMPYRPSI 305

Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
                             N G ++  + G +CLAGD  G F F+ P+K GD+I F+D+  
Sbjct: 306 LKISVENDEELVEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFDAPLKRGDKIVFQDMLH 365

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y I + N FNG+ +P++A  +  G  K ++ FSY DY N 
Sbjct: 366 YTIVKNNSFNGVPLPSLARLDQQG-FKILKNFSYEDYKNR 404


>gi|189095960|pdb|2QGH|A Chain A, Crystal Structure Of Diaminopimelate Decarboxylase From
           Helicobacter Pylori Complexed With L-Lysine
          Length = 396

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 71/381 (18%), Positives = 125/381 (32%), Gaps = 21/381 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP+YL D  K+           K     +  ALK  +   +   L     G    S+ E
Sbjct: 10  KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGE 69

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++   K        +  N   +   +  +L   +  AQ L  K  
Sbjct: 70  IQRALKAGIKPYRIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIETIAQSLGIKAR 129

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           +  RINP++              ++ G   K+ +E       S       + FH   +  
Sbjct: 130 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHFHIGSQLL 189

Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224
                      +  I K        + +  +GGGI  + ++       D+ Q +    + 
Sbjct: 190 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILNALQG 249

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
             + I  EPG +IV  +  L T VL   +  K  VIVD+ +   +   L + + A     
Sbjct: 250 LDLTIICEPGRSIVAESGELITQVLY-EKKNKRFVIVDAGMNDFLRPSLYHAKHAIRVIT 308

Query: 285 TGPY-TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343
                   V G  C + D F +      ++ GD+I+ E V  Y  +  + +N        
Sbjct: 309 PSEISPCDVVGPVCESSDTFLKDAHLPELEPGDKIAIEKVGAYGSSMASQYNSRPKLLEL 368

Query: 344 VKNVDGTIKAIREFSYNDYYN 364
               D      +  +  D + 
Sbjct: 369 AL-EDKIRVIRKREALEDLWR 388


>gi|317013735|gb|ADU81171.1| diaminopimelate decarboxylase [Helicobacter pylori Gambia94/24]
          Length = 405

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 69/385 (17%), Positives = 124/385 (32%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP+YL D  K+           K     +  ALK  +   +   L     G    S+ E
Sbjct: 12  KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLANLESGADCVSIGE 71

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++   K        +  N   +   +  +L   +  AQ L  K  
Sbjct: 72  IYRALKAGIKPYKIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIETIAQSLGIKAR 131

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           +  RINP++              ++ G   K+ +E       S       + FH   +  
Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLSAKKSAFLEPVSVHFHIGSQLL 191

Query: 171 SFLCF---SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224
                   S  +  I K        + +  +GGGI  + ++       D+ Q +    + 
Sbjct: 192 DLDPITEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILNALQG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I  EPG +IV  +  L T VL       K  V+VD+ +   +   L + + A    
Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVVVDAGMNDFLRPSLYHAKHAIRVI 311

Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       V G  C + D F +      ++ GD+++ E V  Y  +  + +N    
Sbjct: 312 TPSKGRKISPCDVVGPVCESSDTFLKDANLPELEPGDKLAIEKVGAYGSSMASQYNSRPK 371

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
                          +  +  D + 
Sbjct: 372 LLELALEDHKIRVIRKREALEDLWR 396


>gi|313507304|pdb|3C5Q|A Chain A, Crystal Structure Of Diaminopimelate Decarboxylase (I148l
           Mutant) From Helicobacter Pylori Complexed With L-Lysine
          Length = 425

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 70/385 (18%), Positives = 123/385 (31%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP+YL D  K+           K     +  ALK  +   +   L     G    S+ E
Sbjct: 32  KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGE 91

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++   K        +  N   +   +  +L   +  AQ L  K  
Sbjct: 92  IQRALKAGIKPYRIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIETIAQSLGIKAR 151

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           +  RINP++              ++ G   K+ +E       S       + FH   +  
Sbjct: 152 ISIRINPNIDAKTHPYLSTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHFHIGSQLL 211

Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224
                      +  I K        + +  +GGGI  + ++       D+ Q +    + 
Sbjct: 212 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILNALQG 271

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I  EPG +IV  +  L T VL       K  VIVD+ +   +   L + + A    
Sbjct: 272 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVI 331

Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       V G  C + D F +      ++ GD+I+ E V  Y  +  + +N    
Sbjct: 332 TPSKGREISPCDVVGPVCESSDTFLKDAHLPELEPGDKIAIEKVGAYGSSMASQYNSRPK 391

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
                          +  +  D + 
Sbjct: 392 LLELALEDHKIRVIRKREALEDLWR 416


>gi|288555982|ref|YP_003427917.1| diaminopimelate decarboxylase [Bacillus pseudofirmus OF4]
 gi|288547142|gb|ADC51025.1| diaminopimelate decarboxylase [Bacillus pseudofirmus OF4]
          Length = 440

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 64/399 (16%), Positives = 122/399 (30%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP ++ D   +    +      +  GV  ++  A K F+   MF   ++        S 
Sbjct: 30  GTPLFVYDVALIKERAEQFQEAFREEGVNYQVAYASKAFSCIAMFQLADELGLSLDVVSG 89

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+          E   ++   K      +   S    ++ +   +L +         + 
Sbjct: 90  GELYTAIQAGVPMERIHFHGNNKSLAELEMAVESGIGCVVVDNFYELKQLGHICARHDVK 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK-----DKIE----SEIKNVNGLMFHNN 166
             I LRI P V           +  S+ G   +       I+        N+ G+  H  
Sbjct: 150 MDILLRITPGVEAHTHDYISTGQEDSKFGFDLESGQVDQAIQLSLLDPHINLLGIHSHIG 209

Query: 167 CEN----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK--------DF 214
            +        +    + + IEK           ++LGGG      +              
Sbjct: 210 SQIFETSGFVMAVEKIFEFIEKWREELGFTPSVLNLGGGFGIRYIEGDTPLPVGEYVRKM 269

Query: 215 CQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269
              +KE +  + ++I   ++EPG ++V +  T   ++    E         VD  +  ++
Sbjct: 270 VHVIKEKAAAHQMEIPEIWIEPGRSLVGDAGTTLYSIGSRKEIPNVRHYLSVDGGMSDNL 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   E   I           T  + G+ C +GD+             D ++      
Sbjct: 330 RPALYQAEYEGILANRADEETTETFSIAGKCCESGDMLIWDLPLPKASHEDVLAVFCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  N +N I  P +           I+  SY D   
Sbjct: 390 YGYSMANNYNRIPRPPVVFVEKGEAQLVIQRESYEDLVR 428


>gi|226311991|ref|YP_002771885.1| diaminopimelate decarboxylase [Brevibacillus brevis NBRC 100599]
 gi|226094939|dbj|BAH43381.1| diaminopimelate decarboxylase [Brevibacillus brevis NBRC 100599]
          Length = 440

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 64/400 (16%), Positives = 129/400 (32%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D+Q++       +    N G   ++  A K F    M   + +        S 
Sbjct: 30  GTPLYVYDEQQIRTKCREFVNAFHNTGFSFQVAYASKAFCTMAMCKLVEEEGLSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E   ++   K  D  I A+ +     + +   +L+     A++ ++K
Sbjct: 90  GELYTALQAGFPVERIHFHGNNKSYDELIMALDAKIGCFVVDNFYELHMLAQLAEERNEK 149

Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEK-----CKDKIE----SEIKNVNGLMFHNN 166
             I LR+ P V           +  S+ G         + I+    S   ++ G+  H  
Sbjct: 150 VAILLRVTPGVEAHTHEYISTGQIDSKFGFDVQNGQALEAIQFSHESNHLHLLGVHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQI----EWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            +      F   +K + +  G    ++    E +++GGG      +       +   +  
Sbjct: 210 SQIFETEGFLVAVKRLTELLGEAKEKLGFLPEVLNVGGGFGIRYVEGDTPQPAETYIKAI 269

Query: 223 EKYSVQ-----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
                Q           I++EPG +I+ +  T    +            +     +  ++
Sbjct: 270 TDIVRQELTALAIPLPEIWIEPGRSIIGDAGTTLYRIGSHKNIPNVRKYIAVDGGMTDNL 329

Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   E      N           + G+ C +GD+          + GD ++      
Sbjct: 330 RPALYDAEYEAAIANKMNAPATEVVSIAGKCCESGDMLIWDVKLPEAQAGDILAVPSTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +           +R  +Y +   N
Sbjct: 390 YGYSMANNYNRIARPAVIFVKDGEAEVVVRRETYAEVVGN 429


>gi|46580970|ref|YP_011778.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46450390|gb|AAS97038.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311234658|gb|ADP87512.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris RCH1]
          Length = 421

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 53/389 (13%), Positives = 107/389 (27%), Gaps = 29/389 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+  +  L         +  + G ++  + K  +   +   + +      + S  E
Sbjct: 28  GSPLYVYSEAILRQRCREMKALSSHPGFRVNYSAKANSNLALLHIIREEGLVVDAMSPGE 87

Query: 63  V-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTII-FNTVSQLNKFKDKAQKLHKKIGL 120
           + M     F  +   Y       E      +   ++  +++SQL+ + +       ++ +
Sbjct: 88  LFMNLRAGFSPDKILYVCNNVSAEELGNAVSHGLLVSVDSLSQLDLYGEV--NPGGRVMV 145

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVNGLMFHNNCENKSFLCFS 176
           R NP +              ++ G       E        N+     + +  +      S
Sbjct: 146 RFNPGIGAGHHKKVVTAGKETKFGVDPASIDEVRTILARHNLTLAGINQHIGSLFLEPES 205

Query: 177 A-MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE------------FSE 223
                            +E I  GGG       Y  +                       
Sbjct: 206 YVEAARFLLTLAERFDDVEVIDFGGGFGIPYHKYDNQPRLDLTAMGAQFDDLISGWAQRR 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
            Y  +  +EPG  +V     L  +V  +        V  D          +         
Sbjct: 266 GYRGRFLVEPGRYVVAECGLLLGSVHSVKSNGANRYVGTDLGFNVLARPVMYDAHHDIEV 325

Query: 283 PNTGPYTAM------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                  +       V G  C +GDI        PV+ GD +   D   Y     + +N 
Sbjct: 326 YREDGAPSDLLLPQTVVGNICESGDIIARNRPLPPVEEGDILGVLDAGAYGYVMSSSYNQ 385

Query: 337 INMPTIAVKNVDGT-IKAIREFSYNDYYN 364
              P   + +++G      R  + +D   
Sbjct: 386 RMRPAEVLIDLEGRPRLVRRRETLDDLVA 414


>gi|15614107|ref|NP_242410.1| diaminopimelate decarboxylase [Bacillus halodurans C-125]
 gi|13431434|sp|Q9KCM5|DCDA_BACHD RecName: Full=Diaminopimelate decarboxylase; Short=DAP
           decarboxylase
 gi|10174161|dbj|BAB05263.1| diaminopimelate decarboxylase [Bacillus halodurans C-125]
          Length = 439

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 58/401 (14%), Positives = 120/401 (29%), Gaps = 37/401 (9%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSS 58
           +  TP ++ D   +            + GV+  +  A K F+   MF    +        
Sbjct: 28  LYGTPLFVYDVALIRERAKDFKQAFADEGVQAQVAYASKAFSCIAMFQLAEELGLSLDVV 87

Query: 59  SLYEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK-- 113
           S  E+          E   ++   K      +   +     + +   +L+   D  ++  
Sbjct: 88  SGGELYTAQQAGVSMERIHFHGNNKSRAEIEMAVEAGIGCFVVDNFYELDLLADICEQKR 147

Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFH 164
               I LRI P V           +  S+ G            K  +  +  ++ G+  H
Sbjct: 148 ATANILLRITPGVEAHTHDYISTGQEDSKFGFDLVSGQATLAVKKALAVDSIHLLGVHSH 207

Query: 165 NNCEN----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD------- 213
              +        +    + +++         +   ++LGGG      +            
Sbjct: 208 IGSQIFETTGFVMAVEKIFEHLVTWREDHGFEPSVLNLGGGFGIRYIEGDTPRPVGDYVK 267

Query: 214 -FCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEA 267
              + +K+   ++ + +   ++EPG ++V +  T   T+    E         VD  +  
Sbjct: 268 EMIRAVKQQIAEHEMSMPEIWIEPGRSLVGDAGTTLYTIGSRKEIPNVRHYLSVDGGMSD 327

Query: 268 HVPDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323
           ++   L   E      N           V G+ C +GD+             D ++    
Sbjct: 328 NLRPALYQAEYEGALANRVNEQPVGMFSVAGKCCESGDMLIWDLPLPEANHEDILAVFCT 387

Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             Y  +  N +N I  P +           I+   Y D   
Sbjct: 388 GAYGYSMANNYNRIPRPPVVFVEDGDAQLVIQRERYEDLVR 428


>gi|315121839|ref|YP_004062328.1| diaminopimelate decarboxylase protein [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495241|gb|ADR51840.1| diaminopimelate decarboxylase protein [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 422

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 58/392 (14%), Positives = 117/392 (29%), Gaps = 26/392 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TP+Y      +  N  T           +  A+K  +   +  TL +   G    S  
Sbjct: 25  VQTPFYCYATAAIEQNYLTFSRALDGMNTMICYAVKANSNQAVIQTLARLGSGLDIVSEG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF----KDKAQKLHK 116
           E+      +   E   ++   K      +        FN  S+        +  +     
Sbjct: 85  ELHRALSAQVPAEKIVFSGVGKTISEMDLALQTGIYCFNIESESELITLNQRAISLGKIA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            I  R+NP V+ +        +   + G                    ++G+  H   + 
Sbjct: 145 PISFRVNPDVNANTHKKISTGKKEDKFGIPIHQIHSLYDYAKDLPGIKISGIDMHIGSQI 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEF 221
                F    K + +   +       I+ I +GGG+  T            D+   + ++
Sbjct: 205 NQIESFCQAFKLLRETTLKLRSDGHNIQHIDVGGGLGITYCHSNPPPPSPSDYASLIHKY 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280
                 +I LEPG  +V +   L + V+ + ++   + I+ D ++   +   L       
Sbjct: 265 FGDLQCKIILEPGRFLVADAGILVSKVISVKKSTDKIFIILDVAMNDFMRPTLYDAYHEI 324

Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
            Y ++         A + G  C  GD           + GD +  E    Y   +   +N
Sbjct: 325 KYISSPEEGRLHVQADIVGPICETGDFIALNRTIPLPQAGDILYIEKAGAYGAVQSGTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367
              +    +             S+       S
Sbjct: 385 SRRLIPEVMVKDSQFHIIRPRMSFQKLIEMDS 416


>gi|299142703|ref|ZP_07035833.1| carboxynorspermidine decarboxylase [Prevotella oris C735]
 gi|298575918|gb|EFI47794.1| carboxynorspermidine decarboxylase [Prevotella oris C735]
          Length = 365

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 109/365 (29%), Positives = 182/365 (49%), Gaps = 13/365 (3%)

Query: 14  LLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGGE 73
           +  NL+    + + A V+++LA K +A W  F    +Y+  TT+SSL E  L  E+FG +
Sbjct: 1   MRRNLNLIANVAREADVEIILAFKAYALWKTFPIFREYIHATTASSLSEARLALEEFGSK 60

Query: 74  THAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ--KLHKKIGLRINPSVSYSKF 131
            H ++ AY D EID +      + FN+++Q  ++ ++ +        GLR+NP  S    
Sbjct: 61  AHTFSPAYTDDEIDEIARCSSHLQFNSLTQYARYHERVRKVNPTISYGLRVNPEYSEVGT 120

Query: 132 ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFIT 191
            L +P  P +R G       E    ++ G   H +CE+     F   LK+IE +F  +  
Sbjct: 121 DLYNPCAPGTRFGISADKMPEMLPDDIEGFHCHCHCESG-ADVFERTLKHIENKFSRWFP 179

Query: 192 QIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNTTTLNTTVLD 250
           Q++WI+ GGG   T  DY        L++F  +Y   ++ LEPG A    T  L + V+D
Sbjct: 180 QLKWINFGGGHLMTRHDYDTLLLVDTLQKFHMRYPWLKVILEPGSAFAWQTGPLVSQVVD 239

Query: 251 ISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT--------GPYTAMVCGRSCLAGD 301
           + E+      + + S   H+PD L    +  +  +          PY   + G SCL+GD
Sbjct: 240 VVEDHGIKTAILNVSFTCHMPDCLEMPYNPVVRGSKYIEADDKSSPYIYRLGGNSCLSGD 299

Query: 302 IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361
             G + F+  + +G+ + FED+  Y   + N FNGI+ P I +  +DGT++ +R++ Y D
Sbjct: 300 FMGYWKFDHALLVGENVIFEDMLHYTTVKTNMFNGISHPAIGLAKLDGTLEVLRKYGYED 359

Query: 362 YYNNL 366
           Y + +
Sbjct: 360 YRDRM 364


>gi|210134488|ref|YP_002300927.1| diaminopimelate decarboxylase [Helicobacter pylori P12]
 gi|210132456|gb|ACJ07447.1| diaminopimelate decarboxylase [Helicobacter pylori P12]
          Length = 405

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 69/385 (17%), Positives = 124/385 (32%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP+YL D  K+           K     +  ALK  +   +   L     G    S+ E
Sbjct: 12  KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGE 71

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++   K        +  N   +   +  +L   +  AQ L  K  
Sbjct: 72  IYRALKAGIKPYRIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIETIAQSLGIKAR 131

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           +  RINP++              ++ G   K+ +E       S   +   + FH   +  
Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLDPVSVHFHIGSQLL 191

Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224
                      +  I K        + +  +GGGI  + ++       D+ Q +    + 
Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILNSLQG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I  EPG +IV  +  L T VL       K  V+VD+ +   +   L + + A    
Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVVVDAGMNDFLRPSLYHAKHAIRVI 311

Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       V G  C + D F +      ++ GD+I+ E V  Y  +  + +N    
Sbjct: 312 TPSKGRKVSPCDVVGPVCESSDTFLKDAHLPELEPGDKIAIEKVGAYGSSMASQYNSRPK 371

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
                          +  +  D + 
Sbjct: 372 LLELALEDHKIRVIRKREALEDLWR 396


>gi|319899468|ref|YP_004159565.1| Diaminopimelate decarboxylase [Bartonella clarridgeiae 73]
 gi|319403436|emb|CBI77004.1| Diaminopimelate decarboxylase [Bartonella clarridgeiae 73]
          Length = 424

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 66/389 (16%), Positives = 116/389 (29%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP+Y    + L+ N +      ++    +  A+K  +   +   L +   G    S  
Sbjct: 25  IGTPFYCYSARALITNFENYQNAFRDMPYLIAYAVKANSNQAILRLLARSGAGADIVSEG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118
           E+              Y+   K  +        D       +  +L +   +A  L    
Sbjct: 85  ELRRALSAGIPAHKIVYSGVGKTIKEIDFALAQDIRCFNVESEPELEQLSARAVALSTTA 144

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
              LRINP V           +  ++ G       E   K        V G+  H   + 
Sbjct: 145 RISLRINPDVDAKTHKKITTGKSENKFGIPLSSAREVYKKAAQLPGLYVCGVDIHIGSQI 204

Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPV-----KDFCQRLKEF 221
            +   F                    I  + +GGG+  +            D+   +++ 
Sbjct: 205 CNLKPFENAFIITADFVRQLWGDGCAITHVDIGGGLGISYGAEHYSLPSPFDYAALVRKH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                + I LEPG +IV     L T+V+++     +N  IVD+++   +   L       
Sbjct: 265 IAPLGINIILEPGRSIVGEAGILVTSVINLKRGKERNFFIVDAAMNDFIRPTLYEAWQNV 324

Query: 281 IYPNTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +     P       A V G  C  GD  G       +  GD ++      Y     N +N
Sbjct: 325 LLVKEAPMDALLINADVVGPICETGDYLGLNRSLPILSAGDLLAVTGAGAYGAVMSNTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    +              Y    N
Sbjct: 385 SRLLIPEVLVQGARYAVVRPRLDYAQLIN 413


>gi|296135146|ref|YP_003642388.1| diaminopimelate decarboxylase [Thiomonas intermedia K12]
 gi|295795268|gb|ADG30058.1| diaminopimelate decarboxylase [Thiomonas intermedia K12]
          Length = 430

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 64/389 (16%), Positives = 118/389 (30%), Gaps = 28/389 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLL--LALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+  +  +           + + V +    A+K  +   +   L +   G    S 
Sbjct: 37  GTPTYVYSRASIEEAAQRYSQAAQASPVHVALRYAVKANSNLAVLQLLARLGWGFDIVSA 96

Query: 61  YEVMLGHEKFG--GETHAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       G  G+     V    D    A+    +     + S+L      AQ   K 
Sbjct: 97  GELKRVLAAGGEAGKVVFSGVGKSADDMRFALDVGVECFNVESPSELAALNRVAQAAGKV 156

Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCE 168
               LR+NP V              ++ G       +        E   + G+  H   +
Sbjct: 157 ARVALRVNPDVDAGTHPYISTGLKTNKFGISQDQAAQLALQTAQFEQVQLVGIACHIGSQ 216

Query: 169 NKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
             +   +   L    ++ ++      +IE I LGGG+     D       + L     + 
Sbjct: 217 ITTVEPYLDALDKVLDLVEQMERKGAKIEHIDLGGGLGIRYTDETPPTPQEWLSPLLARI 276

Query: 226 ------SVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQES 278
                    I +EPG +IV N   L T  L +    +K+  +VD+ +   +   L   E 
Sbjct: 277 SARGFGHRTIVIEPGRSIVGNAGVLLTRTLFLKSTPVKHFAVVDAGMNDLIRPALYSAEQ 336

Query: 279 ATIYPNTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           A +             + G  C + D          +  GD ++      Y +   + +N
Sbjct: 337 AVVPAEQREGSALKYDIVGPVCESADWLARDRALV-LAEGDLLAILSSGAYGMVMASNYN 395

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
               P   + +           +    Y 
Sbjct: 396 SRGRPAEVMVDGATATLIRPRETPEQLYA 424


>gi|325125935|gb|ADY85265.1| Diaminopimelate decarboxylase [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 436

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 59/400 (14%), Positives = 127/400 (31%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           +TP  + D  K+   +     + +  GV  ++  A K F+   ++  +N+    T   S 
Sbjct: 31  QTPLQVFDVGKIRQAIRAFKRVFEEEGVDYEVSYASKAFSCLAIYQVINEEGGHTDVVSG 90

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F  +  +++   K        V      II +   +++        +   
Sbjct: 91  GELWTAMKAGFPMDKVSFHGNNKSRAELELAVDQGVGVIILDNFHEIDLLSQILEEKDAS 150

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNN 166
            K+ LR+ P +S          +  S+ G            +  + +    + G+  H  
Sbjct: 151 SKVMLRVTPGISAHTNEYIQTGQVDSKFGFDMESGQADRALELVLSNPRMKMAGIHAHIG 210

Query: 167 CENKSFLCFSAM----LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR----- 217
            +      F        +        +  + + +++GGG      D       +      
Sbjct: 211 SQIFDVRGFVGCADKLCQLASAWKEKYGYETDILNVGGGFGIHYTDQDQPLPAEEFVRAI 270

Query: 218 ---LKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
              +K   ++ +     I++EPG +IV        TV    +       V     +  ++
Sbjct: 271 VKEVKSKCQENNLKLPAIWIEPGRSIVGPAGFSLYTVGSRKDLPDYPSYVALDGGMGDNI 330

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   E + +              + G+ C +GDI  +       + GD ++      
Sbjct: 331 RPALYQAEYSAVVADRPQAEDEERVNLVGKYCESGDILIKSCPLPKTEPGDVVALLSTGA 390

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  + +N    P +           I+  SY+D   N
Sbjct: 391 YGYSMASNYNRNPRPAVVFAEDGVDQLVIKRESYDDLIAN 430


>gi|121603580|ref|YP_980909.1| diaminopimelate decarboxylase [Polaromonas naphthalenivorans CJ2]
 gi|120592549|gb|ABM35988.1| diaminopimelate decarboxylase [Polaromonas naphthalenivorans CJ2]
          Length = 428

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 57/390 (14%), Positives = 120/390 (30%), Gaps = 29/390 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++  K  +L+ L +     +    ++  A+K  ++  +     +   G    S  E
Sbjct: 34  GTPLFIYSKTAMLSALASYQRGFEGRDAQICYAMKANSSLAVLQVFARADCGFDIVSGGE 93

Query: 63  VMLGHEKFG--GETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKK 117
           +       G   +     V   +     A+ +        + ++L+   +   A KL   
Sbjct: 94  LERVQAAGGDLKKVIFSGVGKTRAEMCQALAAGIGCFNVESEAELDVLSEVAVAMKLRAP 153

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + +R+NP+V              ++ G   +D +             V G+  H   +  
Sbjct: 154 VSIRVNPNVDPKTHPYISTGLKGNKFGVAHEDALRIYQHAASLEGLKVVGIDCHIGSQIT 213

Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
               +   +  +             +  I  GGG+        +      L         
Sbjct: 214 EVTPYLDAMDRVLDLVAAIEAAGIALAHIDFGGGLGINYSADDMPPEADALWRQLLAKLD 273

Query: 228 -------QIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESA 279
                  ++ +EPG ++V N     T VL +     KN  I+D+++       +     A
Sbjct: 274 ARGYGGKKLMIEPGRSLVGNAGICITEVLYLKPGEQKNFCIIDAAMNDLPRPAMYQAFHA 333

Query: 280 TIYPNTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
            +               V G  C +GD  G       V  GD+++      Y ++  + +
Sbjct: 334 IVPVERAATETAGVIYDVVGPVCESGDWIGRDRIL-DVAAGDQLAVMSAGAYCMSMASNY 392

Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           N        + + D         +  D + 
Sbjct: 393 NTRGRAAELLVDGDLARLIRARETAADTFR 422


>gi|308184093|ref|YP_003928226.1| diaminopimelate decarboxylase [Helicobacter pylori SJM180]
 gi|308060013|gb|ADO01909.1| diaminopimelate decarboxylase [Helicobacter pylori SJM180]
          Length = 405

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 70/385 (18%), Positives = 123/385 (31%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP+YL D  K+           K     +  ALK  +   +   L     G    S+ E
Sbjct: 12  KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGE 71

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++   K        +  N   +   +  +L   +  AQ L  K  
Sbjct: 72  IYRALKAGIKPYRIVFSGVGKSGFEIEQALKLNILFLNVESFMELQTIEKIAQSLGIKAR 131

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           +  RINP++              ++ G   K+ +E       S       + FH   +  
Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHFHIGSQLL 191

Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224
                      +  I K        + +  +GGGI  + ++       D+ Q +    + 
Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILNALQG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I  EPG +IV  +  L T VL       K  VIVD+ +   +   L + + A    
Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVI 311

Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       V G  C + D F +      ++ GD+I+ E V  Y  +  + +N    
Sbjct: 312 TPSKGRKVSPCDVVGPVCESSDTFLKDAHLPELEPGDKIAIEKVGAYGSSMASQYNSRPK 371

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
                          +  +  D + 
Sbjct: 372 LLELALEDHKIRVIRKREALEDLWR 396


>gi|315023548|gb|EFT36552.1| diaminopimelate decarboxylase [Riemerella anatipestifer RA-YM]
          Length = 400

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 68/385 (17%), Positives = 118/385 (30%), Gaps = 26/385 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D + +    +           +   A K      +   + +        S+ E
Sbjct: 15  GTPVYVYDAESIKQQYEKLTSSFSE-KTRFFYAAKALTNINILKYVEKLGASLDCVSINE 73

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           V LG    F  +   +     D    +  +     I  + +S L +F  K       I +
Sbjct: 74  VKLGLKAGFSKDRILFTPNSVDISEVEEAVELGVHINIDNISILEQFGTK-FGGSYPIFV 132

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCENKSFLC 174
           R+NP +              S+ G         E        NV GL  H   E K    
Sbjct: 133 RVNPHIFAGGNYKISTGHIDSKFGISIHQMRHIERVAKTTGLNVEGLHMHTGSEIKDPDV 192

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK---------- 224
           F   L+ +  E       +++I +G G     ++  ++   + L +  EK          
Sbjct: 193 FLQGLEIM-FELAEHFPNLKYIDMGSGFKIPYQEGDMETDVKSLGKKVEKALAKFNEEQG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLL--YQESATI 281
             +Q++ EPG+ +V  +         I +      V V+S     +       Y +   +
Sbjct: 252 KELQLWFEPGKFLVGKSGHFLVKSNVIKQTTATVFVGVNSGFNHLIRPMFYDSYHKIENL 311

Query: 282 YPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
               GP     V G  C   D F        V+ GD + F +   Y     + FN    P
Sbjct: 312 SNPNGPERIYTVVGNICET-DTFAWDRKINEVREGDVLVFRNAGAYGFEMSSNFNSRLKP 370

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              +          +   + D   N
Sbjct: 371 AEVLWLDGKAHLIRKRDEFEDLLRN 395


>gi|315586283|gb|ADU40664.1| diaminopimelate decarboxylase [Helicobacter pylori 35A]
          Length = 405

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 70/385 (18%), Positives = 123/385 (31%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP+YL D  K+           K     +  ALK  +   +   L     G    S+ E
Sbjct: 12  KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGE 71

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++   K        +  N   +   +  +L   +  AQ L  K  
Sbjct: 72  IYRALKAGIKPYRIVFSGVGKSEFEIEQALKLNILFLNVESFMELQTIEKIAQSLGIKAR 131

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           +  RINP++              ++ G   K+ +E       S       + FH   +  
Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHFHIGSQLL 191

Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224
                      +  I K        + +  +GGGI  + ++       D+ QR+    + 
Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQRILNALQG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I  EPG +IV  +  L T VL       K  VIVD+ +   +   L + + A    
Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVI 311

Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       V G  C + D F +      ++ GD++  E V  Y  +  + +N    
Sbjct: 312 TPSKGRKISPCDVVGPVCESSDTFLKGVHLPELEPGDKLVIEKVGAYGSSMASQYNSRPK 371

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
                          +  +  D + 
Sbjct: 372 LLELALEDHQIRVIRKREALEDLWR 396


>gi|182435976|ref|YP_001823695.1| putative diaminopimelate decarboxylase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326776601|ref|ZP_08235866.1| diaminopimelate decarboxylase [Streptomyces cf. griseus XylebKG-1]
 gi|178464492|dbj|BAG19012.1| putative diaminopimelate decarboxylase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326656934|gb|EGE41780.1| diaminopimelate decarboxylase [Streptomyces cf. griseus XylebKG-1]
          Length = 463

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 59/398 (14%), Positives = 116/398 (29%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y +D+                    +  A K F +  +   L +        S  E
Sbjct: 63  GTPAYFLDESDFRARCRAWSDAF-GPDADVFYAGKAFLSRAVVRWLKEEGLNLDVCSGGE 121

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +          E  A++   K          +    I+ ++  ++ +    AQ+   +  
Sbjct: 122 LTTALDAGMPAERIAFHGNNKTVAEIERAVEAGVGRIVLDSFQEIVRVAHIAQRHGVRQR 181

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168
             +R+   V               + G    D          +  +  ++ G+  H   +
Sbjct: 182 VQIRVTVGVEAHTHEFIATAHEDQKFGIALADGQAAEAVRRALSLDGLDLIGVHSHIGSQ 241

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F      +++ + +       ++  I LGGG+               + +    
Sbjct: 242 IFDMAGFEVSARRVVQLLAEIRDEHGVELPEIDLGGGLGIAYTSEDDPREPHEIAKALSD 301

Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271
                       + +I +EPG AIV  T      V  I      +  V VD  +  ++  
Sbjct: 302 IVTRECEAAKLRTPRISVEPGRAIVGPTAFTLYEVGTIKPLEGLRTYVSVDGGMSDNIRT 361

Query: 272 YLLYQESATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326
            L   E +        +  P    V G+ C +GDI  +  F    +  GD I+      Y
Sbjct: 362 ALYDAEYSVALVSRTSDAEPMLVRVVGKHCESGDIVVKDAFLPADLAPGDLIAVPATGAY 421

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N    P +           +R  +  D   
Sbjct: 422 CRSMASNYNHALRPPVVAVRDGEARVIVRRETEEDLLR 459


>gi|116514245|ref|YP_813151.1| diaminopimelate decarboxylase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|116093560|gb|ABJ58713.1| diaminopimelate decarboxylase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
          Length = 436

 Score =  220 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 59/400 (14%), Positives = 127/400 (31%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           +TP  + D  K+   +     + +  GV  ++  A K F+   ++  +N+    T   S 
Sbjct: 31  QTPLQVFDVGKIRQAIRAFKRVFEEEGVDYEVSYASKAFSCLAIYQVINEEGGHTDVVSG 90

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F  +  +++   K        V      II +   +++        +   
Sbjct: 91  GELWTAMKAGFPMDKVSFHGNNKSRAELELAVDQGVGVIILDNFHEIDLLSQILEEKDAS 150

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNN 166
            K+ LR+ P +S          +  S+ G            +  + +    + G+  H  
Sbjct: 151 SKVMLRVTPGISAHTNEYIQTGQVDSKFGFDMESGQADRALELVLSNPRMKMAGIHAHIG 210

Query: 167 CENKSFLCFSAM----LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR----- 217
            +      F        +        +  + + +++GGG      D       +      
Sbjct: 211 SQIFDVRGFVGCADKLCQLASAWKEKYGYETDILNVGGGFGIHYTDQDQPLPAEEFVRAI 270

Query: 218 ---LKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
              +K   ++ +     I++EPG +IV        TV    +       V     +  ++
Sbjct: 271 VKEVKSKCQENNLKLPAIWIEPGRSIVGPAGFSLYTVGSRKDLPGYPSYVALDGGMGDNI 330

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   E + +              + G+ C +GDI  +       + GD ++      
Sbjct: 331 RPALYQAEYSAVVADRPQAEDEERVNLVGKYCESGDILIKSCPLPKTEPGDVVALLSTGA 390

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  + +N    P +           I+  SY+D   N
Sbjct: 391 YGYSMASNYNRNPRPAVVFAEDGVDQLVIKRESYDDLIAN 430


>gi|217033418|ref|ZP_03438848.1| hypothetical protein HP9810_1g32 [Helicobacter pylori 98-10]
 gi|216944123|gb|EEC23551.1| hypothetical protein HP9810_1g32 [Helicobacter pylori 98-10]
          Length = 405

 Score =  220 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 70/385 (18%), Positives = 124/385 (32%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP+YL D  K+           K     +  ALK  +   +   L     G    S+ E
Sbjct: 12  KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGE 71

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++   K        +  N   +   +  +L   +  AQ L  K  
Sbjct: 72  IHRALKAGIKPYRIVFSGVGKSGFEIEQALKLNILFLNVESFMELQTIEKIAQSLGIKAR 131

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           +  RINP++              ++ G   K+ +E       S       + FH   +  
Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPISVHFHIGSQLL 191

Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP---VKDFCQRLKEFSEK 224
                      +  I K        + +  +GGGI  + ++     + D+ QR+    + 
Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKIYDYAQRILNALQG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I  EPG +IV  +  L T VL       K  VIVD+ +   +   L + + A    
Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVI 311

Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       V G  C + D F +      ++ GD++  E V  Y  +  + +N    
Sbjct: 312 TPSKGRKISPCDVVGPVCESSDTFLKGVHLPELEPGDKLVIEKVGAYGSSMASQYNSRPK 371

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
                          +  +  D + 
Sbjct: 372 LLELALEDHQIRVIRKREALEDLWR 396


>gi|297379243|gb|ADI34130.1| carboxynorspermidine decarboxylase [Helicobacter pylori v225d]
          Length = 405

 Score =  220 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 137/400 (34%), Positives = 210/400 (52%), Gaps = 38/400 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y+++ ++L  N      +R+ +G K+LLALK +A W  F  L Q ++G  +S LY
Sbjct: 7   IPTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCTSGLY 66

Query: 62  EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112
           E  L  E+FGG     E   Y+ A+K+ E++A+L    ++IFN+  Q     ++  DK +
Sbjct: 67  EAKLAFEEFGGRESQKEVCVYSPAFKEAEMNAILPLATSVIFNSFYQYATYKDRILDKNK 126

Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162
           +L        K+GLRINP  S     + +P    SRLG    +  +   ++    V+GL 
Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKVSRLGITPSEFEKGVKEHGLEGVSGLH 186

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
           FH +CE          L+++E+ F  ++  +EW++ GGG H T  DY V    Q +K+F 
Sbjct: 187 FHTHCEQN-ADALCRTLEHVERHFKPYLENMEWVNFGGGHHITRSDYDVNLLIQTIKDFK 245

Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
           E+Y   ++ LEPGEAI      L  +V+DI +N + + I+D+S  AH+PD L       I
Sbjct: 246 ERYHNIEVILEPGEAIGWQCGFLIASVIDIVKNDQEIAILDASFSAHMPDCLEMPYRPNI 305

Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
                             N G  +  + G +CLAGD  G F FE P+K GD+I F+D+  
Sbjct: 306 LKISVENDEELIEVERGENQGALSYFLGGPTCLAGDFMGSFSFETPLKRGDKIVFQDMLH 365

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y I + N FNG+ +P++A  +  G  K ++ FSY DY N 
Sbjct: 366 YTIVKNNSFNGVPLPSLAKLDQQG-FKILKNFSYEDYKNR 404


>gi|194336708|ref|YP_002018502.1| diaminopimelate decarboxylase [Pelodictyon phaeoclathratiforme
           BU-1]
 gi|194309185|gb|ACF43885.1| diaminopimelate decarboxylase [Pelodictyon phaeoclathratiforme
           BU-1]
          Length = 417

 Score =  220 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 63/386 (16%), Positives = 128/386 (33%), Gaps = 23/386 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++  ++ ++ +        +        ++K      +  TL +   G   +S  E
Sbjct: 29  GTPLFVTSRRSVIESYKAFECAFEALPHFTCYSVKANYNLSVIRTLAELGCGCDVNSAGE 88

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +    +     +   +    K  +    A+ S    +   ++S+L      A +L     
Sbjct: 89  LYRALQSGVSPDKIIFAGVGKREDEIVYALQSGVLMLKAESLSELRAIDRIAGELGLTAS 148

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-----IESEIKNVN--GLMFHNNCENK 170
           + +RINP+V+              + G    +      + S + N+   GL  H   +  
Sbjct: 149 VAIRINPNVTAETHPYITTGDSKEKFGIDEAELSTVFSLLSRLPNIKLVGLDMHIGSQIF 208

Query: 171 SFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               + A    +   F         IE++ +GGG   T        P++ F ++L     
Sbjct: 209 DPEYYVAATVKLLAIFKASRELGFAIEFLDIGGGFPVTYDPLKPATPIEHFAEKLVPMLL 268

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDI--SENIKNLVIVDSSVEAHVPDYLLYQESAT- 280
              V++  EPG  +V N + L T +L    +   K   +VD+ +   +   L        
Sbjct: 269 PLDVKVIFEPGRYLVANASVLLTRILYKKSNHTGKQFFVVDAGMTELIRPALYQSHHEVQ 328

Query: 281 -IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            +  +     A V G  C + D F         + G+ ++      Y     + +NG   
Sbjct: 329 SVTFHEEEVIADVVGPICESSDFFARHRAIGAAEEGELLAVMSAGAYAAVMSSNYNGRLR 388

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365
           P   + N        +  +      N
Sbjct: 389 PAEVLVNGSEVKLVRKRETLEQLVQN 414


>gi|327440840|dbj|BAK17205.1| diaminopimelate decarboxylase [Solibacillus silvestris StLB046]
          Length = 439

 Score =  220 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 69/400 (17%), Positives = 135/400 (33%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP ++ D   +       +   +  GVK  +  A K FA    +    Q        S 
Sbjct: 30  GTPLFVYDTALIRKRSRGFIDTFEQLGVKAQVAYASKAFACVAAYQLAAQENLSLDVVSG 89

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  +   ++   K          +    I+ +   +++  K+ AQ+ ++K
Sbjct: 90  GELYTAIKAGFPADRIHFHGNNKSIAELELAFETGIGCIVVDNFYEISLIKEIAQQKNQK 149

Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           +   LR+ P V           +  S+ G         E  K  +  E   + GL  H  
Sbjct: 150 MKILLRVTPGVEAHTHDFITTGQADSKFGFDLNNGQADEAFKQVVNDEHIELLGLHCHIG 209

Query: 167 CENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQR 217
            +      FS     +++ +           + ++LGGG             P +     
Sbjct: 210 SQIFETEGFSLAAGKVMQKMGAWKEQHGFVAQVLNLGGGFGIRYTEEDKPLEPHEYVADM 269

Query: 218 LKEFSEKY------SVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHV 269
           ++   ++         +I++EPG ++V +  T   T+       N+++ + VD  +  ++
Sbjct: 270 IRTVQDESKKLNLAMPEIWIEPGRSLVGDAGTSLYTIGSQKTVPNVRDYIAVDGGMSDNI 329

Query: 270 PDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   I  N        T  V G+ C +GD        +    GD ++      
Sbjct: 330 RPALYDAKYEAIIANKANDPKTSTYTVAGKLCESGDKLIIDASLQNAHTGDILAMFCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  + +N +  P +          AI+  SY D   N
Sbjct: 390 YGYSMASNYNRVPRPAVVFVENGEHQLAIKRESYEDLVVN 429


>gi|49474787|ref|YP_032829.1| diaminopimelate decarboxylase [Bartonella quintana str. Toulouse]
 gi|49240291|emb|CAF26766.1| Diaminopimelate decarboxylase [Bartonella quintana str. Toulouse]
          Length = 424

 Score =  220 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 58/388 (14%), Positives = 116/388 (29%), Gaps = 26/388 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L+          ++    +  A+K  +   +   L     G    S  
Sbjct: 25  VGTPFYCYSANALVTRFKDYQNAFRDMPSLIAYAVKANSNQAVLQLLAANGAGADVVSEG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKF--KDKAQKLHK 116
           E+              Y+   K  +        D       +  +L +   +  A     
Sbjct: 85  ELRRALAAGIPAHCIVYSGVGKTVKEIDFALAHDICCFNVESEPELEQLSARAVAFSKTA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCEN 169
           +I LRINP V           +  ++ G          K   +    +V G+  H   + 
Sbjct: 145 RISLRINPDVDAKTHKKITTGKYENKFGIPLSLAWDVYKKAAQLPGIHVCGVDMHIGSQI 204

Query: 170 ---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV-----KDFCQRLKEF 221
              K F     ++ +  +        +  + +GGG+               D+   +K  
Sbjct: 205 CDLKPFEDAFLIVADFVRHLSSSGYALTHVDIGGGLGIAYGHEQHSVPSLFDYAALVKRH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                ++I +EPG +I+     L T+V+ +     +N V+VD+++   +   L       
Sbjct: 265 IAPLGLKIIVEPGRSIIGEAGVLVTSVIYLKRGEGRNFVVVDAAMNDLIRPTLYDAWQNV 324

Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +     P       A + G  C  GD          +  GD ++      Y+    + +N
Sbjct: 325 LLVKQAPEDASFIRADIVGSVCETGDYLALDRRVPILAAGDLLAITGAGAYSAVMASTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYY 363
              +    +              Y    
Sbjct: 385 SRLLVPEVLVQDTRYAIIRPRLDYAQLI 412


>gi|239944279|ref|ZP_04696216.1| putative diaminopimelate decarboxylase [Streptomyces roseosporus
           NRRL 15998]
 gi|239990734|ref|ZP_04711398.1| putative diaminopimelate decarboxylase [Streptomyces roseosporus
           NRRL 11379]
 gi|291447747|ref|ZP_06587137.1| diaminopimelate decarboxylase [Streptomyces roseosporus NRRL 15998]
 gi|291350694|gb|EFE77598.1| diaminopimelate decarboxylase [Streptomyces roseosporus NRRL 15998]
          Length = 463

 Score =  220 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 59/398 (14%), Positives = 115/398 (28%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y +D+                    +  A K F +  +   L +        S  E
Sbjct: 63  GTPAYFLDESDFRARCRAWADAF-GPDADVFYAGKAFLSRAVVRWLKEEGLNLDVCSGGE 121

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +          E  A++   K          +    I+ ++  ++ +    AQ+   +  
Sbjct: 122 LTTALDAGMPAERIAFHGNNKTVAEIERAVEAGVGRIVLDSFQEIVRVAHIAQRHGVRQR 181

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168
             +R+   V               + G    D          +  +   + G+  H   +
Sbjct: 182 VQIRVTVGVEAHTHEFIATAHEDQKFGIALADGQAAEAVRRALSLDGLELIGVHSHIGSQ 241

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F      +++ + +       ++  I LGGG+               + +    
Sbjct: 242 IFDMAGFEVSARRVVQLLAEIRDEHGVELPEIDLGGGLGIAYTSDDDPREPHEIAKALSD 301

Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271
                       + +I +EPG AIV  T      V  I      +  V VD  +  ++  
Sbjct: 302 IVTRECEAAKLRTPRISVEPGRAIVGPTAFTLYEVGTIKPLEGLRTYVSVDGGMSDNIRT 361

Query: 272 YLLYQESATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326
            L   E +        +  P    V G+ C +GDI  +  F    +  GD I+      Y
Sbjct: 362 ALYDAEYSVALVSRTSDAEPMLVRVVGKHCESGDIVVKDAFLPADLAPGDLIAVPATGAY 421

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N    P +           +R  +  D   
Sbjct: 422 CRSMASNYNHALRPPVVAVRDGEARVIVRRETEEDLLR 459


>gi|332879997|ref|ZP_08447681.1| diaminopimelate decarboxylase [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|332681993|gb|EGJ54906.1| diaminopimelate decarboxylase [Capnocytophaga sp. oral taxon 329
           str. F0087]
          Length = 401

 Score =  220 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 58/385 (15%), Positives = 112/385 (29%), Gaps = 27/385 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            +P Y+ D  K+ +          +   +++  A+K  +   +   + +   G  + S+ 
Sbjct: 14  GSPVYVYDADKISSQYQRLTAAFSSVPHLRINYAMKALSNISVLKLMKKLGAGLDTVSIQ 73

Query: 62  EVMLG-HEKFGGETHAYNVAYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           EV LG    F  +   +       +  +  +     +  + +S L +F  K       + 
Sbjct: 74  EVQLGLRAGFAPQQIIFTPNGVSIDEIEEAMRLGVQLNIDNLSVLEQFGSK--HPEVPVC 131

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFL 173
           +RINP V              S+ G                  ++NG+  H   +     
Sbjct: 132 IRINPHVMAGGNSNISVGHIDSKFGISIHQIPHILRIVENTKMHINGIHIHTGSDILDID 191

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
            F    + I  E       +++I  G G     K+  ++   + L E      +    E 
Sbjct: 192 VFLYAAE-ILFEMAKNFKNLQFIDFGSGFKVPYKEGDIQTNIEELGERLSARFLAFCQEY 250

Query: 234 GE----------AIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQES--AT 280
           G            +V+        V  + +        VDS     +             
Sbjct: 251 GRDLTLAFEPGKFLVSQAGYFLVKVNVVKQTTSTVFAGVDSGFNHLIRPMFYGATHFIEN 310

Query: 281 IYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
           I    G      V G  C   D F        +  GD + F +   Y     + +N    
Sbjct: 311 ISNPEGRKRFYSVVGYVCET-DTFASNRQIAEITEGDILCFHNAGAYCYTMSSNYNSRLR 369

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
           P   +          R  +++D   
Sbjct: 370 PAEVLWYKGEAHLIRRAETFDDLVR 394


>gi|207091832|ref|ZP_03239619.1| diaminopimelate decarboxylase [Helicobacter pylori HPKX_438_AG0C1]
          Length = 405

 Score =  220 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 69/385 (17%), Positives = 123/385 (31%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP+YL D  K+           K     +  ALK  +   +   L     G    S+ E
Sbjct: 12  KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGE 71

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++   K        +  N   +   +  +L   +  AQ L  K  
Sbjct: 72  IYRALKAGIKPYRIVFSGVGKSGFEIEQALKLNILFLNVESFMELTTIEKIAQSLGVKAR 131

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           +  RINP++              ++ G   K+ +E       S       + FH   +  
Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHFHIGSQLL 191

Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224
                      +  I K        + +  +GGGI  + ++       D+ Q +    + 
Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILNALQG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I  EPG +IV  +  L T VL       K  V+VD+ +   +   L + + A    
Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVVVDAGMNDFLRPSLYHAKHAIRVI 311

Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       V G  C + D F +      ++ GD+I+ E V  Y  +  + +N    
Sbjct: 312 TPSKGRKISPCDVVGPVCESSDTFLKDVHLPELEPGDKIAIEKVGAYGSSMASQYNSRPK 371

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
                          +  +  D + 
Sbjct: 372 LLELALEDHKIRVIRKREALEDLWR 396


>gi|330446227|ref|ZP_08309879.1| carboxynorspermidine decarboxylase [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328490418|dbj|GAA04376.1| carboxynorspermidine decarboxylase [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 369

 Score =  220 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 171/361 (47%), Positives = 239/361 (66%), Gaps = 3/361 (0%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE 68
           ID+QKL+NNL+ A  +++ +GVKL+LALKCF+ WG+FD +  Y+DGTTSS  +EV LG E
Sbjct: 2   IDEQKLINNLEQAKKLKQLSGVKLVLALKCFSTWGVFDVMKPYLDGTTSSGPFEVRLGAE 61

Query: 69  KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY 128
           KFGGETHAY+V Y   +++ VL  C+ IIFN++SQL   +  A      +GLR+NP +S 
Sbjct: 62  KFGGETHAYSVGYSQEDVEDVLQYCNKIIFNSISQLQAHRHLADGKAS-VGLRLNPGISC 120

Query: 129 SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH 188
           +   LADP R FSRLG +     +     ++G MFH NCENKS   F  +L +I + FG 
Sbjct: 121 AGQDLADPARQFSRLGVQENLLTDELFDALDGAMFHMNCENKSADAFITLLDSIAERFGR 180

Query: 189 FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248
           ++++++W+SLGGG+ FT  DY ++     LK F+E++SVQ+YLEPGEAI+T TT L  TV
Sbjct: 181 YLSKLDWVSLGGGVFFTWPDYELEKLATALKAFAERFSVQLYLEPGEAIITQTTDLVVTV 240

Query: 249 LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLAGDIFGEF 306
           +DI EN     IVDS+ EAH  D L+Y E ATI      G +  ++   SCLAGD F   
Sbjct: 241 VDIVENEMKTAIVDSATEAHRLDTLIYNEPATITESSEEGSHEYVIGSCSCLAGDQFCVT 300

Query: 307 HFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366
            FE+P+ IG ++   D AGY + + NWFNG+ MP+I  +  +G I+ + EFSY+D+  +L
Sbjct: 301 SFEQPLTIGQKLHIADSAGYTMVKLNWFNGLRMPSIYCRRSNGNIEKLNEFSYDDFAASL 360

Query: 367 S 367
           S
Sbjct: 361 S 361


>gi|113869390|ref|YP_727879.1| diaminopimelate decarboxylase [Ralstonia eutropha H16]
 gi|113528166|emb|CAJ94511.1| diaminopimelate decarboxylase [Ralstonia eutropha H16]
          Length = 419

 Score =  220 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 56/387 (14%), Positives = 117/387 (30%), Gaps = 26/387 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L           +    ++  A+K  +   +     +   G    S  E
Sbjct: 27  GTPTYVYSRAALTAAYQAYAAACQGRKAQVQYAMKANSNLAVLQVFAKLGAGFDIVSGGE 86

Query: 63  VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++   K       A+  +       ++ +L++  + A ++ K+  
Sbjct: 87  LKRVLAAGGDPRKVVFSGVGKSAAEMELALAHDVRCFNVESIPELDRLNEVAGRVGKRAR 146

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
             LRINP V              ++ G   +D + +           V G+  H   +  
Sbjct: 147 VSLRINPDVDAKTHPYISTGLKGNKFGIAFEDVLPTYRAAAALPHLEVTGIDCHIGSQIT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               +   L    ++ +       ++E I +GGG+  T  D    D         E+   
Sbjct: 207 EVEPYLEALDKVLDVVEALERDGIRLEHIDVGGGLGITYTDETPPDITGFATTLLERVAA 266

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES-- 278
                 ++  EPG ++V N   L T V  +         + D+++       +       
Sbjct: 267 RGHGHREVLFEPGRSLVGNAGVLLTQVEFLKPGAAKNFCIVDAAMNDLARPAMYEAYHRI 326

Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
              +  +    T  + G  C +GD  G       V+ GD ++      Y     + +N  
Sbjct: 327 EPVVLRDAQAATYDIVGPVCESGDWLGRDRALA-VQPGDLLAVMSAGAYGFTMSSNYNTR 385

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
                 + +              D + 
Sbjct: 386 PRAAEVMVDGASVHLVRERELVEDLFR 412


>gi|331268703|ref|YP_004395195.1| diaminopimelate decarboxylase [Clostridium botulinum BKT015925]
 gi|329125253|gb|AEB75198.1| diaminopimelate decarboxylase [Clostridium botulinum BKT015925]
          Length = 437

 Score =  220 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 62/398 (15%), Positives = 119/398 (29%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           KTP Y++D++ + +N    +   K      K+  A K F    M   + +        S 
Sbjct: 34  KTPLYVMDEELIRDNCRRYIKGFKAHQGINKVAYAGKAFLTLAMCQLIKEEGMCLDVVSG 93

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+   ++  F  E   ++   K  E   +         + +   ++      A      
Sbjct: 94  GELYTAYKGNFPMEKVYFHGNNKTLEEIDMGVKFGVGRFVADNFYEIENINKIAKKHNKI 153

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
           +KI LRI P +           +  S+ G                +       G   H  
Sbjct: 154 QKIILRITPGIEAHTHDYIKTGQIDSKFGFTLLQNQTLKAVEMANDFSNIEFVGFHCHIG 213

Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFCQRLK--- 219
            +      +   +K +             +I+ + LGGG              +      
Sbjct: 214 SQIFEIEPYKDEVKIMLSLIKEVNDKLGCKIKELDLGGGFGIYYGKGDCPKKIEEFCEAI 273

Query: 220 --------EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
                   +  +     + +EPG +IV N  T   T+  I E  +    V     +  ++
Sbjct: 274 LQEADKVSKELDIEVPALVIEPGRSIVGNAGTTLYTIGSIKEIPEIRKYVSVDGGMTDNI 333

Query: 270 PDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +  N           + G+ C +GDI  E       + GD ++      
Sbjct: 334 RPALYRANYECLVANNVNANSKEKVTISGKCCESGDILLENVKVSHAESGDILAVLSTGA 393

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
           Y  +  + +N I    +       +    +  SY+D  
Sbjct: 394 YGYSMSSNYNKIPRSAVVFVKNGKSKLICKRQSYDDLI 431


>gi|313206511|ref|YP_004045688.1| diaminopimelate decarboxylase [Riemerella anatipestifer DSM 15868]
 gi|312445827|gb|ADQ82182.1| diaminopimelate decarboxylase [Riemerella anatipestifer DSM 15868]
 gi|325336041|gb|ADZ12315.1| Diaminopimelate decarboxylase [Riemerella anatipestifer RA-GD]
          Length = 400

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 68/385 (17%), Positives = 117/385 (30%), Gaps = 26/385 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D + +    +           +   A K      +   + +        S+ E
Sbjct: 15  GTPVYVYDAESIKQQYEKLTSSFSE-KTRFFYAAKALTNINILKYVEKLGASLDCVSINE 73

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           V LG    F  +   +     D    +  +     I  + +S L +F  K       I +
Sbjct: 74  VKLGLKAGFSKDRILFTPNSVDISEVEEAVELGVHINIDNISILEQFGTK-FGGSYPIFV 132

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCENKSFLC 174
           R+NP +              S+ G         E        NV GL  H   E K    
Sbjct: 133 RVNPHIFAGGNYKISTGHIDSKFGISIHQMRHIERVAKTTGLNVEGLHMHTGSEIKDPDV 192

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK---------- 224
           F   L+ +  E       +++I +G G     ++  ++   + L +  EK          
Sbjct: 193 FLQGLEIM-FELAEHFPNLKYIDMGSGFKIPYQEGDMETDVKSLGKKVEKALAKFNEEQG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLL--YQESATI 281
             +Q++ EPG+ +V  +         I +      V V+S     +       Y +   +
Sbjct: 252 KELQLWFEPGKFLVGKSGHFLVKSNVIKQTTATVFVGVNSGFNHLIRPMFYDSYHKIENL 311

Query: 282 YPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
               GP     V G  C   D F        V+ GD + F +   Y     + FN    P
Sbjct: 312 SNPNGPERIYTVVGNICET-DTFAWDRKINEVREGDILVFRNAGAYGFEMSSNFNSRLKP 370

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
                         +   + D   N
Sbjct: 371 AEVFWLDGKAHLIRKRDEFEDLLRN 395


>gi|251780918|ref|ZP_04823838.1| diaminopimelate decarboxylase [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
 gi|243085233|gb|EES51123.1| diaminopimelate decarboxylase [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
          Length = 431

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 65/400 (16%), Positives = 122/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++D+  +  N +      K      ++  A K F    M   +N+        S 
Sbjct: 29  GTPLYVMDEGLIRQNCNDYYRYFKCNNSLNRVAYAGKAFLTLEMCKIINEENLSLDVVSG 88

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F  +   ++   K  +     V       + +   ++      A      
Sbjct: 89  GELFTAYKSGFPLDKVMFHGNNKTLDEIELGVKLGVGRFVVDNYYEMEALNRMAASYNKV 148

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG-----EKCKDKIES----EIKNVNGLMFHNN 166
           +KI LRI P +           +  S+ G        +D I          ++GL  H  
Sbjct: 149 QKIFLRITPGIEAHTHEYIKTGQVDSKFGFAPVGNMIEDAINKSIDLPNIELSGLHCHIG 208

Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK---------- 212
            +      +   ++ +              I+ + LGGG                     
Sbjct: 209 SQIFEIEPYEDAVEIMLGLIKKIQENTGYLIKELDLGGGFGIYYNRGDKPKTTKEYCEAI 268

Query: 213 -DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            +    +   + +    + +EPG +IV N+     T+  I +       V     +  ++
Sbjct: 269 LNKVDEVCSRTGQSKPSLIIEPGRSIVGNSGITLYTIGSIKDIPGVRKYVSVDGGMSDNI 328

Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   E   +  N        T  +CG+ C +GDI          +  D +S      
Sbjct: 329 RPALYNAEYECMLANKVEKDLKETVTICGKCCESGDILLNNVNLSEPQSNDILSVMTTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P + +   +      R  +Y D   N
Sbjct: 389 YGYSMSNNYNKIPRPPVVMVKDNKERLICRRETYEDLIQN 428


>gi|325996891|gb|ADZ49099.1| putative carboxynorspermidine decarboxylase [Helicobacter pylori
           2017]
          Length = 405

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 136/400 (34%), Positives = 208/400 (52%), Gaps = 38/400 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y ++ ++L  N      +R+ +G K+LLALK +A W  F  L Q ++G  +S LY
Sbjct: 7   IPTPCYALESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66

Query: 62  EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112
           E  L  E+FGG     E   Y+ A+K+ E+ A+L    +IIFN+  Q     ++  DK +
Sbjct: 67  EAKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFHQYATYKDRILDKNK 126

Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162
           +L        K+GLRINP  S     + +P    SRLG    +  +   ++    V+GL 
Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSEFEKGVKEHGLEGVSGLH 186

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
           FH +CE          L+++E+ F  ++  + W++ GGG H T  DY V    Q +K+F 
Sbjct: 187 FHTHCEQN-ADSLCRTLEHVERHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQTIKDFK 245

Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
           ++Y   ++ LEPGEAI      L  +V+DI +N +   I+D+S  AH+PD L      +I
Sbjct: 246 KRYHDIEVILEPGEAIGWQCGFLIASVIDIVQNDQESAILDASFSAHMPDCLEMPYRPSI 305

Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
                             N G ++  + G +CLAGD  G F FE P+K GD+I F+D+  
Sbjct: 306 LKISVENDEEIIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGDKIVFQDMLH 365

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y I + N FNG+ +P++A  +  G  K ++ FSY DY N 
Sbjct: 366 YTIVKNNSFNGVPLPSLAKIDSQG-FKILKSFSYEDYKNR 404


>gi|308061323|gb|ADO03211.1| carboxynorspermidine decarboxylase [Helicobacter pylori Cuz20]
          Length = 405

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 135/400 (33%), Positives = 209/400 (52%), Gaps = 38/400 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y+++ ++L  N      + + +G K+LLALK +A W  F  L Q ++G  +S LY
Sbjct: 7   IPTPCYVLESERLEKNAKILEIVCQQSGAKILLALKGYAFWREFGILRQKLNGCCASGLY 66

Query: 62  EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112
           E  L  E+FGG     E   Y+ A+K+ E+ A+L    +IIFN+  Q     ++  DK +
Sbjct: 67  EAKLAFEEFGGRESQKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNK 126

Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162
           +L        K+GLRINP  S     + +P    SRLG    +  +   ++    V+GL 
Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKVSRLGITPSEFEKGVKEHGLEGVSGLH 186

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
           FH +CE          L+++E+ F  ++  + W++ GGG H T  DY V    Q +K+F 
Sbjct: 187 FHTHCEQN-ADALCRTLEHVERHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQTIKDFK 245

Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
           E+Y   ++ LEPGEAI      L  +V+DI +N + + I+D+S   H+PD L      +I
Sbjct: 246 ERYHDIEVILEPGEAIGWQCGFLIASVIDIVQNDQEIAILDASFSTHMPDCLEMPYRPSI 305

Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
           +                 N G ++  + G +CLAGD  G F FE P+K GD+I F+D+  
Sbjct: 306 FKISVENDEEIVEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGDKIVFQDMLH 365

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y I + N FNG+ +P++A  +  G  K ++ FSY DY N 
Sbjct: 366 YTIVKNNSFNGVPLPSLARLDQQG-FKILKNFSYEDYKNR 404


>gi|209521076|ref|ZP_03269807.1| diaminopimelate decarboxylase [Burkholderia sp. H160]
 gi|209498495|gb|EDZ98619.1| diaminopimelate decarboxylase [Burkholderia sp. H160]
          Length = 420

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 56/387 (14%), Positives = 116/387 (29%), Gaps = 26/387 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L    +              +A+K  +   + +   +   G    S  E
Sbjct: 28  GTPLYVYSRAALTAAWNAYAGACAGRRASAHVAVKANSNLAVLNVFARLGAGFDIVSGGE 87

Query: 63  VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +          E   ++   K      DA+ +        ++ +L++    A        
Sbjct: 88  LARVLAAGGKAENTVFSGVGKQASEMRDALAAGVKCFNVESIPELDRLNAVAGEMGKKAP 147

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D               V G+  H   +  
Sbjct: 148 VSLRVNPDVDAKTHPYISTGLKSNKFGVAFDDARATYQAAAAMANLEVVGIDCHIGSQIT 207

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               +   +  +    ++       I  I +GGG+  T  D    +  + ++   ++   
Sbjct: 208 EVAPYLDAIDKVLELVEQIEQDGVTIRHIDVGGGLGITYDDETPPEIGEFVRTVLDRIEA 267

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278
                 ++Y EPG ++V N   L T +  +     KN  IVD+++       +       
Sbjct: 268 RGHAHREVYFEPGRSLVGNAGVLLTRLEFLKPGEDKNFAIVDAAMNDLARPAMYDAYHAI 327

Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
              +  +   +   V G  C +GD  G       V+ GD ++      Y     + +N  
Sbjct: 328 EPVVKRDVPAHVYDVVGPVCESGDWLGRERLLA-VEPGDLLAIRSAGAYGFVMSSNYNTR 386

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
                 + +                + 
Sbjct: 387 ARAAEVMVDGTQAHVVRAREEVEQLFA 413


>gi|307636706|gb|ADN79156.1| putative carboxynorspermidine decarboxylase [Helicobacter pylori
           908]
 gi|325995291|gb|ADZ50696.1| putative Carboxynorspermidine decarboxylase [Helicobacter pylori
           2018]
          Length = 405

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 136/400 (34%), Positives = 209/400 (52%), Gaps = 38/400 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y ++ ++L  N      +R+ +G K+LLALK +A W  F  L Q ++G  +S LY
Sbjct: 7   IPTPCYALESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66

Query: 62  EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112
           E  L  E+FGG     E   Y+ A+K+ E+ A+L    +IIFN+  Q     ++  DK +
Sbjct: 67  EAKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFHQYATYKDRILDKNK 126

Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162
           +L        K+GLRINP  S     + +P    SRLG    +  +   ++    V+GL 
Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSEFEKGVKEHGLEGVSGLH 186

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
           FH +CE          L+++E+ F  ++  + W++ GGG H T  DY V    Q +K+F 
Sbjct: 187 FHTHCEQN-ADSLCRTLEHVERHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQTIKDFK 245

Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
           ++Y   ++ LEPGEAI      L  +V+DI +N + + I+D+S  AH+PD L      +I
Sbjct: 246 KRYHDIEVILEPGEAIGWQCGFLIASVIDIVQNDQEIAILDASFSAHMPDCLEMPYRPSI 305

Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
                             N G ++  + G +CLAGD  G F FE P+K GD+I F+D+  
Sbjct: 306 LKISVENDEEIIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGDKIVFQDMLH 365

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y I + N FNG+ +P++A  +  G  K ++ FSY DY N 
Sbjct: 366 YTIVKNNSFNGVPLPSLAKIDSQG-FKILKSFSYEDYKNR 404


>gi|261838891|gb|ACX98656.1| carboxynorspermidine decarboxylase (nspC) [Helicobacter pylori 52]
          Length = 405

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 136/400 (34%), Positives = 210/400 (52%), Gaps = 38/400 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y+++ ++L  N      +R+ +G K+LLALK +A W  F  L Q ++G  +S LY
Sbjct: 7   IPTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66

Query: 62  EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112
           E  L  E+FGG     E   Y+ A+K+ E+ A+L    +IIFN+  Q     ++  DK +
Sbjct: 67  EAKLAFEEFGGRESQKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNK 126

Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162
           +L        K+GLRINP  S    ++ +P    SRLG       +   ++    V+GL 
Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPVIYNPCSKVSRLGITPSGFEKGVKEHGLEGVSGLH 186

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
           FH +CE          L+++E+ F  ++  + W++ GGG H T  DY V    Q +K+F 
Sbjct: 187 FHTHCEQN-ADALCRTLEHVERHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQTIKDFK 245

Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
           E+Y   ++ LEPGEAI      L  +V+DI +N + + I+D+S  AH+PD L      +I
Sbjct: 246 ERYHNIEVVLEPGEAIGWQCGFLIASVIDIVKNDQEIAILDASFSAHMPDCLEMPYRPSI 305

Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
                             N G ++  + G +CLAGD  G F F+ P+K GD+I F+D+  
Sbjct: 306 LKISVENDEELIEIEKGENQGAFSYFLGGPTCLAGDFMGSFSFDVPLKRGDKIVFQDMLH 365

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y I + N FNG+ +P++A  +  G  K ++ FSY DY N 
Sbjct: 366 YTIVKNNSFNGVPLPSLARLDQQG-FKILKNFSYEDYKNR 404


>gi|323702566|ref|ZP_08114229.1| diaminopimelate decarboxylase [Desulfotomaculum nigrificans DSM
           574]
 gi|323532540|gb|EGB22416.1| diaminopimelate decarboxylase [Desulfotomaculum nigrificans DSM
           574]
          Length = 446

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 62/399 (15%), Positives = 122/399 (30%), Gaps = 36/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR-KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP Y+ID+     N         +  G +++ A K      +   + Q   G    S  
Sbjct: 30  GTPLYVIDEALFRQNCRDYYRAFTEEYGAEVIYASKTLTNLAVCTIVEQEGLGLDVVSGG 89

Query: 62  EVM-LGHEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+      +F      ++      +    A+      I+ + + +L      A +L  + 
Sbjct: 90  ELYTAAMARFPMHRVYFHGNNKSPEELRQALEYKVGRIVVDNLYELELLNQIAGELATRA 149

Query: 119 GLRIN--PSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNC 167
            + I   P V           +  S+ G   +           +E     + G   H   
Sbjct: 150 KIIIRLSPGVEAHTHEYIKTGQIDSKFGLAIENGMAMAAVKRCLELNNVELKGFHCHIGS 209

Query: 168 ENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ------- 216
           +      ++     M+  ++  +       E + LGGG+             +       
Sbjct: 210 QIFELQSYAHAAEVMMDFVQDVYRATGYLTEELDLGGGLGIYYCQGDEPRPVKEYADIMM 269

Query: 217 -RLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVP 270
             LK  + +Y+    +I +EPG +I     T   TV  I +       V     +  +  
Sbjct: 270 GALKARAARYNLPLPKIIVEPGRSISGPAGTTLYTVGAIKDIPGIRKYVSVDGGMGDNPR 329

Query: 271 DYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
             L   +     A            + G+ C +GD+         ++ GD ++      Y
Sbjct: 330 PALYQAKYEACAANRMTEANTEKVSIAGKCCESGDMLIWDIELPALQAGDILAVASTGAY 389

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           N +    +N +  P + +         +R   Y D   N
Sbjct: 390 NYSMSMNYNRLPRPAMVLVGGGKADLIVRREDYADLIRN 428


>gi|283955739|ref|ZP_06373230.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni
           1336]
 gi|283792694|gb|EFC31472.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni
           1336]
          Length = 402

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 55/383 (14%), Positives = 122/383 (31%), Gaps = 22/383 (5%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+Y+ +   +           K    ++  A+K  +   +         G    S+ EV
Sbjct: 12  TPFYIYNFDFIKERFLNLKEAFKARKSQIFYAVKANSNLSLLQMFANLDSGFDCVSIGEV 71

Query: 64  MLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
                         ++   K  +    A+  +   I   + +++   +  A++L+ K  +
Sbjct: 72  KRALKAGAKAYKIIFSGVGKTKEELRQALEYDILYINLESEAEMMLLESVAKELNLKARI 131

Query: 121 --RINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCE--- 168
             R+NP+V              ++ G +     +              G+ FH   +   
Sbjct: 132 SIRVNPNVDAKTHPYISTGLNENKFGVEIDTARKMYLYAKNSSFLEPVGVHFHIGSQLLD 191

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK 224
                  + ++  + +E       +++  +GGG+    +       +  + Q +      
Sbjct: 192 ISPIHEAAGIVAKLVRELKALQIDLKFFDIGGGLGVAYEKDECEVDLYSYAQGVLAQLHG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I +EPG  +V  +     +VL       K  V+VD ++   +   L       I P
Sbjct: 252 LDLTIGMEPGRYLVAKSGEFVCSVLYEKQNKTKRFVVVDGAMNDLIRPSLYEAYHEIILP 311

Query: 284 NTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                     V G  C +GD F +       + GD +  ++   Y  +  + +N  N   
Sbjct: 312 YNQAQESLCDVVGGICESGDFFAKARSLPSTQSGDIMVIKNTGAYGFSMSSNYNTRNKVC 371

Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364
                        +  ++ D   
Sbjct: 372 ELALEEGQVRLIRQRENFEDQIA 394


>gi|208434236|ref|YP_002265902.1| diaminopimelate decarboxylase [Helicobacter pylori G27]
 gi|208432165|gb|ACI27036.1| diaminopimelate decarboxylase [Helicobacter pylori G27]
          Length = 405

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 68/385 (17%), Positives = 122/385 (31%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP+YL D  K+           K     +  ALK  +   +   L     G    S+ E
Sbjct: 12  KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGE 71

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++   K        +  N   +   +  +L   +  AQ L  K  
Sbjct: 72  IHRALKAGIKPYRIVFSGVGKSAFEIEQALKLNILFLNVESFMELTTIETIAQSLGIKAR 131

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           +  RINP++              ++ G   K+ +E       S       + FH   +  
Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHFHIGSQLL 191

Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224
                      +  I K        + +  +GGGI  + ++       D+ Q +    + 
Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILNALQG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I  EPG +IV  +  L T VL       K  V+VD+ +   +   L + + A    
Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVVVDAGMNDFLRPSLYHAKHAIRVI 311

Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       V G  C + D F +      ++ GD++  E V  Y  +  + +N    
Sbjct: 312 TPSKGREISPCDVVGPVCESSDTFLKDAHLPELEPGDKLVIEKVGAYGSSMASQYNSRPK 371

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
                          +  +  D + 
Sbjct: 372 LLELALEDHKIRVIRKREALEDLWR 396


>gi|188527096|ref|YP_001909783.1| diaminopimelate decarboxylase [Helicobacter pylori Shi470]
 gi|188143336|gb|ACD47753.1| diaminopimelate decarboxylase [Helicobacter pylori Shi470]
 gi|308063152|gb|ADO05039.1| diaminopimelate decarboxylase [Helicobacter pylori Sat464]
          Length = 405

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 70/385 (18%), Positives = 123/385 (31%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP+YL D  K+           K     +  ALK  +   +   L     G    S+ E
Sbjct: 12  KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGE 71

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++   K        +  N   +   +  +L   +  AQ L  K  
Sbjct: 72  IYRALKAGIKPYRIVFSGVGKSEFEIEQALKLNILFLNVESFMELQTIEKIAQSLGIKAR 131

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           +  RINP++              ++ G   K+ +E       S       + FH   +  
Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPISVHFHIGSQLL 191

Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224
                      +  I K        + +  +GGGI  + ++       D+ QR+    + 
Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQRILNALQG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I  EPG +IV  +  L T VL       K  VIVD+ +   +   L + + A    
Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVI 311

Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       V G  C + D F +      ++ GD++  E V  Y  +  + +N    
Sbjct: 312 TPSKGRKISPCDVVGPVCESSDTFLKGVNLPELEPGDKLVIEKVGAYGSSMASQYNSRPK 371

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
                          +  +  D + 
Sbjct: 372 LLELALEDHQIRVIRKREALEDLWR 396


>gi|254778993|ref|YP_003057098.1| Diaminopimelate decarboxylas (DAP decarboxylase) [Helicobacter
           pylori B38]
 gi|254000904|emb|CAX28840.1| Diaminopimelate decarboxylas (DAP decarboxylase) [Helicobacter
           pylori B38]
          Length = 405

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 69/385 (17%), Positives = 123/385 (31%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP+YL D  K+           K     +  ALK  +   +   L     G    S+ E
Sbjct: 12  KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGE 71

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++   K        +  N   +   +  +L   +  AQ L  K  
Sbjct: 72  IHRALKAGIKPYRIVFSGVGKSVFEIEQALKLNILFLNVESFMELKTIETIAQSLEIKAR 131

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           +  RINP++              ++ G   K+ +E       S       + FH   +  
Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHFHIGSQLL 191

Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224
                      +  I K        + +  +GGGI  + ++       D+ Q +    + 
Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILNALQG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I  EPG +IV  +  L T VL       K  VIVD+ +   +   L + + A    
Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVI 311

Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       V G  C + D F +      ++ GD+++ E V  Y  +  + +N    
Sbjct: 312 TPSKGRKISPCDVVGPVCESSDTFLKDAHFPELEPGDKLAIEKVGAYGSSMASQYNSRPK 371

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
                          +  +  D + 
Sbjct: 372 LLELALEDHKIRVIRKREALEDLWR 396


>gi|295836505|ref|ZP_06823438.1| diaminopimelate decarboxylase [Streptomyces sp. SPB74]
 gi|295826063|gb|EFG64650.1| diaminopimelate decarboxylase [Streptomyces sp. SPB74]
          Length = 465

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 60/398 (15%), Positives = 113/398 (28%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y +D++                G  +  A K F +  +   L++        S  E
Sbjct: 65  GTPAYFLDEEDFRARCRDWRSAFGE-GADVFYAGKAFLSRAVVRWLHEEGLNLDVCSGGE 123

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           ++            A++   K               I+ ++  +L +    AQ   +   
Sbjct: 124 LLTALDAGMPAARIAFHGNNKTAAEIERAVSAGVGRIVVDSFQELARVAHTAQAHGRVQR 183

Query: 120 --LRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
             +R+   V               + G         E  +  +  +   + G+  H   +
Sbjct: 184 VQIRVTVGVEAHTHEFIATAHEDQKFGLALAGGQAAEAVRRALTLDGIELVGIHSHIGSQ 243

Query: 169 NKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F    + +             ++  I LGGG+               + +    
Sbjct: 244 IFDMAGFEVSARRVVGLLAEIRDEHGVELPEIDLGGGLGIAYTSEDDPREPHEIAKALGD 303

Query: 225 YSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271
              +             +EPG AIV  T      V  I      +  V VD  +  ++  
Sbjct: 304 IVTRECESAGLAVPRISVEPGRAIVGPTAFTLYEVGTIKPLEGLRTYVSVDGGMSDNIRT 363

Query: 272 YLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326
            L   E     A+   +  P    V G+ C +GDI     F    +  GD ++      Y
Sbjct: 364 ALYDAEYSVALASRVSDAEPMLVRVVGKHCESGDIVVRDAFLPADLAPGDLLAVPATGAY 423

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N    P +      G    +R  +  D   
Sbjct: 424 CRSMASNYNHALRPPVVAVRDGGARVVVRRETEEDLLR 461


>gi|108562445|ref|YP_626761.1| carboxynorspermidine decarboxylase [Helicobacter pylori HPAG1]
 gi|107836218|gb|ABF84087.1| carboxynorspermidine decarboxylase [Helicobacter pylori HPAG1]
          Length = 405

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 138/400 (34%), Positives = 210/400 (52%), Gaps = 38/400 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y+++ ++L  N      +R+ +G K+LLALK +A W  F  L Q ++G  +S LY
Sbjct: 7   IPTPCYVLESERLEKNAKILEIVRQQSGAKILLALKGYAFWREFGILRQKLNGCCASGLY 66

Query: 62  EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112
           E  L  E+FGG     E   Y+ A+K+ E+ A+L    +IIFN+  Q     ++  DK +
Sbjct: 67  EAKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNK 126

Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162
           +L        K+GLRINP  S     + +P    SRLG       +   ++    V+GL 
Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSGFEKGVKEHGLEGVSGLH 186

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
           FH +CE          L+++EK F  ++  + W++ GGG H T  DY V    Q +K+F 
Sbjct: 187 FHTHCEQN-ADALCRTLEHVEKHFRPYLENMAWVNFGGGHHITRSDYDVNLLIQTIKDFK 245

Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
           E+Y   ++ LEPGEAI      L  +V+DI +N + + I+D+S  AH+PD L      +I
Sbjct: 246 ERYHNIEVVLEPGEAIGWQCGFLIASVIDIVQNDQEIAILDASFSAHMPDCLEMPYRPSI 305

Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
           +                 N G ++  + G +CLAGD  G F FE P+K GD+I F+D+  
Sbjct: 306 FKISVENDEELIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFEAPLKRGDKIVFQDMLH 365

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y I + N FNG+ +P++A  +  G  K ++ FSY DY N 
Sbjct: 366 YTIVKNNSFNGVPLPSLAKLDQQG-FKILKNFSYEDYKNR 404


>gi|305664829|ref|YP_003861116.1| diaminopimelate decarboxylase [Maribacter sp. HTCC2170]
 gi|88707951|gb|EAR00190.1| diaminopimelate decarboxylase [Maribacter sp. HTCC2170]
          Length = 413

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 70/384 (18%), Positives = 121/384 (31%), Gaps = 27/384 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           P Y+ D +K+++  +      K    +KL  A K  +   +   +N    G  + S+ EV
Sbjct: 16  PVYVYDSEKIISQFNRLTNAFKGVNQLKLNYAAKALSNIAILRLMNSLGSGLDTVSIQEV 75

Query: 64  MLGH-EKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            LG    F  E+  +        EI+        I  + +S L +F  K       + +R
Sbjct: 76  QLGLLAGFKPESIIFTPNGVSLEEIEEAAKLGVQINIDNLSVLEQFGGK--HPDIPVCIR 133

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFLCF 175
           INP V              S+ G                  N+NG+  H   +      F
Sbjct: 134 INPHVMAGGNSNISVGHIDSKFGISIHQIPHLLRIVELTKMNINGIHMHTGSDILDIDVF 193

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY----- 230
               + I  E       +++I  G G     K+  ++   + L +       +       
Sbjct: 194 LYASE-ILFETAKNFKNLDFIDFGSGFKVPYKEGDIETNIEELGKKLTGRFNEFCKEYGK 252

Query: 231 -----LEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQES--ATIY 282
                 EPG+ +V+        V  + +        VDS     +   L         I 
Sbjct: 253 ELTLAFEPGKFLVSEAGHFLAKVNVVKQTTSTVFASVDSGFNHLIRPMLYGASHTIENIS 312

Query: 283 PNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
              G      V G  C   D FG       +  GD + F++   Y     + +N    P 
Sbjct: 313 NPQGRERYYSVVGYICET-DTFGNNRRINEISEGDILCFKNAGAYCFTMASNYNSRYRPA 371

Query: 342 IAVKNVDGTIKAIREFSYNDYYNN 365
             + + D         +++D   N
Sbjct: 372 EVLWHDDKAHLIRERETFDDLIKN 395


>gi|228914093|ref|ZP_04077713.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|229090475|ref|ZP_04221713.1| Diaminopimelate decarboxylase [Bacillus cereus Rock3-42]
 gi|228692825|gb|EEL46546.1| Diaminopimelate decarboxylase [Bacillus cereus Rock3-42]
 gi|228845546|gb|EEM90577.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 449

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 59/400 (14%), Positives = 121/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 41  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 100

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F      ++   K  E    A+ +N    + +   +L    D A      
Sbjct: 101 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 160

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G         +  +  ++    NV G+  H  
Sbjct: 161 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 220

Query: 167 CENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F   ++ + +            ++ +++GGG      +              
Sbjct: 221 SQIFETAGFVRAIEVLHQFLEEVRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 280

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +           +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 281 TSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 340

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +    T  + G+ C +GD+         V   D ++      
Sbjct: 341 RPALYNARYEAMLANRGNDENEETVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 400

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 401 YGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGN 440


>gi|124008785|ref|ZP_01693474.1| diaminopimelate decarboxylase [Microscilla marina ATCC 23134]
 gi|123985698|gb|EAY25578.1| diaminopimelate decarboxylase [Microscilla marina ATCC 23134]
          Length = 418

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 73/386 (18%), Positives = 124/386 (32%), Gaps = 26/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D +K+   L+      K   +K+  A K      +   L     G    S+ E
Sbjct: 23  DTPLYVYDAEKMATKLNMLKDAFKGLNLKIKYAAKALTNVSVLKFLRTQGVGLDVVSIQE 82

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGL 120
             LG +  F  E   +       E   +       I  + +S L +F   A        +
Sbjct: 83  AHLGLKTGFKPEEILFTPNCVSLEEIKMAVELGLVINIDNISILEQFGH-AYGDSVPCCI 141

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESE------IKNVNGLMFHNNCENKSFLC 174
           RINP +              S+ G                   V GL  H   +      
Sbjct: 142 RINPHLMAGGNANISVGHIDSKFGVSILQARHLLRVIKTNNIKVTGLHMHTGSDILDAEV 201

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ--------RLKEFSEKYS 226
           F     +I  +    +  +E++  G G     K+  V             R KEF + Y 
Sbjct: 202 FLR-GADILFDLAQDLPDLEFVDFGSGFRVAYKEGDVTTDIVDLGKKLTVRFKEFCKDYG 260

Query: 227 VQ--IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
            +  I+ EPG+ +V+           I      + +   S   H+   ++Y    TI+  
Sbjct: 261 RELEIWFEPGKFLVSEAGHFLMKTNVIKTTPATVFVGVDSGFNHLIRPMMYDSHHTIFNV 320

Query: 285 TGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
           + P +       V G  C   D FG       V+ GD I+ ++   Y  +  + +N    
Sbjct: 321 SNPNSETTRVYTVVGYICET-DTFGWDRKLNEVREGDIIALKNAGAYGFSMASNYNSRFR 379

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365
           P   + +        +  + +D   N
Sbjct: 380 PAEVLVHNGKAHLIRKRETMDDILRN 405


>gi|228945117|ref|ZP_04107477.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|229121060|ref|ZP_04250300.1| Diaminopimelate decarboxylase [Bacillus cereus 95/8201]
 gi|228662389|gb|EEL17989.1| Diaminopimelate decarboxylase [Bacillus cereus 95/8201]
 gi|228814561|gb|EEM60822.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
          Length = 449

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 62/400 (15%), Positives = 127/400 (31%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 41  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 100

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F      ++   K  E    A+ +N    + +   +L    D A      
Sbjct: 101 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 160

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G         +  +  ++    NV G+  H  
Sbjct: 161 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 220

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTD---------KDYPVKD 213
            +      F   ++ + +       Q    ++ +++GGG              + Y    
Sbjct: 221 SQIFETAGFVRAIEVLHQFLEEVREQTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 280

Query: 214 FCQRLKEFSEKYSV--QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
                ++F+ +     +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 281 TSAVREQFTVRNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 340

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +    T  + G+ C +GD+         V   D ++      
Sbjct: 341 RPALYNARYEAMLANRGNDKNEETVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 400

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 401 YGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGN 440


>gi|240851353|ref|YP_002972756.1| diaminopimelate decarboxylase [Bartonella grahamii as4aup]
 gi|240268476|gb|ACS52064.1| diaminopimelate decarboxylase [Bartonella grahamii as4aup]
          Length = 424

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 65/387 (16%), Positives = 109/387 (28%), Gaps = 26/387 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L+          +     L  A+K  +   +   L     G    S  
Sbjct: 25  VGTPFYCYSANALVTRFKDYKKAFQGMPSLLAYAVKANSNQAVLRLLANNGAGADVVSEG 84

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118
           E+              Y+   K           D       +  +L +   +A  L K  
Sbjct: 85  ELRRALAVGIPAHRIVYSGVGKTMREIDFALAQDIYCFNVESEPELEQLSQRAVALSKIA 144

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
              LRINP V           +  ++ G       E+  K        V G+  H   + 
Sbjct: 145 RVSLRINPDVDAKTHKKITTGKSENKFGIPLLLAREAYKKADSLPGLQVCGIDMHIGSQI 204

Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPV-----KDFCQRLKEF 221
                F      I             I  I +GGG+               D+   +K++
Sbjct: 205 CDLKPFEEAFFLIADCVRQLWSDGYAITHIDIGGGLGIAYGCEQHTVPSPFDYAALVKKY 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                + I +EPG +IV     L T+VL +     +N VIVD+++   +   L       
Sbjct: 265 IAPLGINIVVEPGRSIVGQAGVLMTSVLYLKRGQGRNFVIVDAAMNDLMRPTLYDAWQNV 324

Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +             A + G  C  GD          +  GD ++      Y     + +N
Sbjct: 325 VLVKKAAKDAPLIRADIVGSVCETGDYLALDRCLPILAPGDLLAITQAGAYGAVMASTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDY 362
              +    +              Y   
Sbjct: 385 SRLLVPEVLVQDTCYAVVRPRLDYAQL 411


>gi|308182464|ref|YP_003926591.1| diaminopimelate decarboxylase [Helicobacter pylori PeCan4]
 gi|308064649|gb|ADO06541.1| diaminopimelate decarboxylase [Helicobacter pylori PeCan4]
          Length = 405

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 68/385 (17%), Positives = 122/385 (31%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP+YL D  K+           K     +  ALK  +   +   L     G    S+ E
Sbjct: 12  KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGE 71

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++   K        +  N   +   +  +L   +  AQ L  K  
Sbjct: 72  IHRALKAGIKPYRIVFSGVGKSGFEIEQALKLNILFLNVESFMELTTIETIAQSLGIKAR 131

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           +  RINP++              ++ G   K+ +E       S       + FH   +  
Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHFHIGSQLL 191

Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224
                      +  I K        + +  +GGGI  + ++       D+ Q +    + 
Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILNALQG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I  EPG +IV  +  L T VL       K  V+VD+ +   +   L + + A    
Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVVVDAGMNDFLRPSLYHAKHAIRVI 311

Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       V G  C + D F +      ++ GD++  E V  Y  +  + +N    
Sbjct: 312 TPSKGREISPCDVVGPVCESSDTFLKDANLPELEPGDKLVIEKVGAYGSSMASQYNSRPK 371

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
                          +  +  D + 
Sbjct: 372 LLELALEDHKIRVIRKREALEDLWR 396


>gi|317008698|gb|ADU79278.1| carboxynorspermidine decarboxylase [Helicobacter pylori India7]
          Length = 405

 Score =  219 bits (558), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 135/400 (33%), Positives = 209/400 (52%), Gaps = 38/400 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y+++ ++L  N      +R+ +G K+LLALK +A W  F  L Q ++G  +S LY
Sbjct: 7   IPTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66

Query: 62  EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
           E  L  E+FGG     E   Y+ A+K+ E+ A+L    +IIFN+  Q   +KD+    +K
Sbjct: 67  EAKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYAAYKDRILDKNK 126

Query: 117 K----------IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162
           +          +GLRINP  S     + +P    SRLG       +   ++    V+GL 
Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSGFEKGVKEHGLEGVSGLH 186

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
           FH +CE          L+++E+ F  ++  + W++ GGG H T  DY V    Q +K+F 
Sbjct: 187 FHTHCEQN-ADALCRTLEHVERHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQTIKDFK 245

Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
           E+Y   ++ LEPGEAI      L  +V+DI +N + + I+D+S  AH+PD L      +I
Sbjct: 246 ERYHNIEVILEPGEAIGWQCGFLIASVIDIVKNDQEIAILDASFSAHMPDCLEMPYRPSI 305

Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
           +                 N G ++  + G +CLAGD  G F F+ P+K GD+I F+D+  
Sbjct: 306 FKISVENDEELIEVERGENQGAFSYFLGGPTCLAGDFMGSFSFDTPLKRGDKIVFQDMLH 365

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y I + N FNG+ +P++A  +  G  K ++ FSY DY N 
Sbjct: 366 YTIVKNNSFNGVPLPSLAKLDQQG-FKILKNFSYEDYKNR 404


>gi|317012132|gb|ADU82740.1| diaminopimelate decarboxylase [Helicobacter pylori Lithuania75]
          Length = 405

 Score =  219 bits (558), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 70/385 (18%), Positives = 124/385 (32%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP+YL D  K+     +     K     +  ALK  +   +   L     G    S+ E
Sbjct: 12  KTPFYLYDFDKIKQAFLSYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGE 71

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++   K        +  N   +   +  +L   +  AQ L  K  
Sbjct: 72  IYRALKAGIKPYRIVFSGVGKSGFEIEQALKLNILFLNVESFMELTTIETIAQSLGIKAR 131

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           +  RINP++              ++ G   K+ +E       S       + FH   +  
Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHFHIGSQLL 191

Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224
                      +  I K        + +  +GGGI  + ++       D+ Q +    + 
Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILNALQG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I  EPG +IV  +  L T VL       K  VIVD+ +   +   L + + A    
Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVI 311

Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       V G  C + D F +      ++ GD+I+ E V  Y  +  + +N    
Sbjct: 312 TPSKGREISPCDVVGPVCESSDTFLKDAHLPELEPGDKIAIEKVGAYGSSMASQYNSRPK 371

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
                          +  +  D + 
Sbjct: 372 LLELALEDHKIRVIRKREALEDLWR 396


>gi|210134219|ref|YP_002300658.1| carboxynorspermidine decarboxylase [Helicobacter pylori P12]
 gi|210132187|gb|ACJ07178.1| carboxynorspermidine decarboxylase [Helicobacter pylori P12]
          Length = 405

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 136/400 (34%), Positives = 209/400 (52%), Gaps = 38/400 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y+++ ++L  N      + + +G K+LLALK +A W  F  L Q ++G  +S LY
Sbjct: 7   IPTPCYVLESERLEKNAKILEIVHQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66

Query: 62  EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112
           E  L  E+FGG     E   Y+ A+K+ E+ A+L    +IIFN+  Q     ++  DK +
Sbjct: 67  EARLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFHQYATYKDRILDKNK 126

Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162
           +L        K+GLRINP  S     + +P    SRLG       +   ++    V+GL 
Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSGFEKGVKEHGLEGVSGLH 186

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
           FH +CE          L+++E+ F  ++  +EW++ GGG H T  DY V    Q +K+F 
Sbjct: 187 FHTHCEQN-ADALCRTLEHVERHFRPYLENMEWVNFGGGHHITKSDYDVNLLIQTIKDFK 245

Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
           E+Y   ++ LEPGEAI      L  +V+DI +N + + I+D+S  AH+PD L      +I
Sbjct: 246 ERYHNIEVVLEPGEAIGWQCGFLIASVIDIVQNDQEIAILDASFSAHMPDCLEMPYRPSI 305

Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
                             N G ++  + G +CLAGD  G F F+ P+K GD+I F+D+  
Sbjct: 306 LKISVENDEELVEMEKGENQGAFSYFLGGPTCLAGDFMGSFSFDTPLKRGDKIVFQDMLH 365

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y I + N FNG+ +P++A  +  G  K ++ FSY DY N 
Sbjct: 366 YTIVKNNSFNGVPLPSLAKLDQQG-FKILKNFSYEDYKNR 404


>gi|260797946|ref|XP_002593961.1| hypothetical protein BRAFLDRAFT_118823 [Branchiostoma floridae]
 gi|229279194|gb|EEN49972.1| hypothetical protein BRAFLDRAFT_118823 [Branchiostoma floridae]
          Length = 447

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 64/392 (16%), Positives = 124/392 (31%), Gaps = 31/392 (7%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRK-NAGVKLL-LALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +P+YL    ++ +N+       K      +L  +LK      +  TL     G  + S  
Sbjct: 42  SPFYLYSLSQVRHNVSRYKEALKTLPNPHVLGYSLKANGNLEILKTLRAMGCGAVTVSGN 101

Query: 62  EVMLGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+ L     F  ++  YN    +D E++  +     I  ++   L   +  A  + ++  
Sbjct: 102 EIRLALTAGFSPDSIVYNGNGKQDWELELAVRVNCLINVDSDFDLRHVRSAADTVRQRAR 161

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDK--------IESEIKNVNGLMFHNNCEN 169
             +RINP +              S+ G +C                  + GL  H     
Sbjct: 162 VLIRINPDIDPRVHPYNSTGLASSKFGLECSQLPGLLEKVRRWPAQLQLVGLHCHLGSTI 221

Query: 170 KSFLCFSAML----KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF------CQRLK 219
                F  ++      +E         + ++++GGG+                     ++
Sbjct: 222 TDVSLFRDVVSVVSAEMESVRSQGFHDLRYLNMGGGLGIDYLRQQDSTNPSPADLVSSIR 281

Query: 220 EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQES 278
           +     ++ + LEPG +I+ +   L T V+ +     K  V+ D S+   +   L     
Sbjct: 282 DALTDKNICLILEPGRSIIGDAAILVTKVIGVKGNGKKRFVVTDGSMTEVIRPSLYSAYH 341

Query: 279 ATIYP------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                      +       V G  C  GD  G+         G  +   DV  Y  +  +
Sbjct: 342 HIQLTEPSQAEDPTEQEYDVVGPVCECGDFLGKDRTIPTPHEGCGLVVFDVGAYCSSMAS 401

Query: 333 WFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            +N    P   + +        R  +  D   
Sbjct: 402 NYNMRIRPAEVLVDGATWRFIRRPETLEDMTR 433


>gi|302869606|ref|YP_003838243.1| diaminopimelate decarboxylase [Micromonospora aurantiaca ATCC
           27029]
 gi|302572465|gb|ADL48667.1| diaminopimelate decarboxylase [Micromonospora aurantiaca ATCC
           27029]
          Length = 461

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 58/398 (14%), Positives = 122/398 (30%), Gaps = 38/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+  L                 +  A K F    +   + +        +  E
Sbjct: 62  GTPAYVLDEDDLRERCREFRAAF--PDADVYYAGKAFLCRAVVRMIAEEGMFLDVCTGGE 119

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117
           +          E   ++   K       AV +    II ++ +++++  + A++  +  K
Sbjct: 120 LATALSAGMPPERIGFHGNNKSVAELTRAVDAGVGRIIVDSFTEIDRLSELARERGVRPK 179

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G               ++ ++  + GL  H   +
Sbjct: 180 VLVRVTVGVEAHTHEFIATAHEDQKFGFSLAGGAAAAAAFKILDEDVLELRGLHSHIGSQ 239

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP----VKDFCQRLKE 220
                 F      +L    +       ++  + LGGG               D  +RL++
Sbjct: 240 IFDASGFEVSARRVLALQSQIRDARGVELPELDLGGGFGIAYTTQDDPASPHDLAKRLRK 299

Query: 221 FSEKYS-------VQIYLEPGEAIVTNTTTLNTT------VLDISENIKNLVIVDSSVEA 267
             +            + +EPG AIV               V  +   +     +  ++  
Sbjct: 300 IVDGECAAENLAVPHLSVEPGRAIVGPAVFTLYQAGTVKDVDGLRTYVSVDGGMSDNIRT 359

Query: 268 HVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326
            + D       A       P  A V G+ C +GDI  +  F    V+ GD ++      Y
Sbjct: 360 ALYDASYSATLANRTSTAQPMLARVVGKHCESGDIVVKDEFLPADVQPGDLVAVPGTGAY 419

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N +  P +           +R  + +D   
Sbjct: 420 CRSMASNYNHVPRPPVVAVREGRARLIVRRETEDDLLA 457


>gi|118476980|ref|YP_894131.1| diaminopimelate decarboxylase [Bacillus thuringiensis str. Al
           Hakam]
 gi|118416205|gb|ABK84624.1| diaminopimelate decarboxylase [Bacillus thuringiensis str. Al
           Hakam]
          Length = 449

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 59/400 (14%), Positives = 122/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 41  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 100

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115
            E+       F      ++   K  E    A+ +N    + +   +L    D A +    
Sbjct: 101 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFLELEILHDLAVQNGKF 160

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G         +  +  ++    NV G+  H  
Sbjct: 161 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 220

Query: 167 CENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F   ++ + +            ++ +++GGG      +              
Sbjct: 221 SQIFETAGFVRAIEVLHQFLEEVRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 280

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +           +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 281 TSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 340

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +    T  + G+ C +GD+         V   D ++      
Sbjct: 341 RPALYNARYEAMLANRGNDENEETVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 400

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 401 YGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGN 440


>gi|228926550|ref|ZP_04089621.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228833138|gb|EEM78704.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 449

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 59/400 (14%), Positives = 122/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 41  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 100

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115
            E+       F      ++   K  E    A+ +N    + +   +L    D A +    
Sbjct: 101 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFLELEILHDLAVQNGKF 160

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G         +  +  ++    NV G+  H  
Sbjct: 161 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 220

Query: 167 CENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F   ++ + +            ++ +++GGG      +              
Sbjct: 221 SQIFETAGFVRAIEVLHQFLEEVRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 280

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +           +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 281 TSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTIYTVGSVKDIPGIRKYVSVDGGMTDNL 340

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +    T  + G+ C +GD+         V   D ++      
Sbjct: 341 RPALYNARYEAMLANRGNDENEETVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 400

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 401 YGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGN 440


>gi|199598988|ref|ZP_03212396.1| Diaminopimelate decarboxylase [Lactobacillus rhamnosus HN001]
 gi|199590096|gb|EDY98194.1| Diaminopimelate decarboxylase [Lactobacillus rhamnosus HN001]
          Length = 447

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 64/399 (16%), Positives = 129/399 (32%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           +TP Y+ D   + + +     + + AGV   +  A K FA   M++            S 
Sbjct: 26  QTPLYVYDVGAIRHQIRAFKQVFETAGVAYAVSYASKAFATIAMYEVAKAEAIHVDVVSG 85

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKD--KAQKLH 115
            E+       F  +  +++   K       A+ +   TII +   +L+   +  KA    
Sbjct: 86  GELYTAQAASFPMDKVSFHGNNKSKAELEQALDAGVGTIIVDNFYELDLLDELLKAAVGK 145

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           + + +R+ P +S          +  S+ G         E  K  +  +  N+ G+  H  
Sbjct: 146 QNVLIRVAPGISAHTHAYDQTGQTDSKFGFDLESGQADEAAKRILADDHLNLLGIHAHIG 205

Query: 167 CENKSFLCFSAMLKNI----EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---- 218
            +      F A+ + +    +     F    + +++GGG              +      
Sbjct: 206 SQIFEVAGFEAVTQKLLTVLDHWHQQFGFTPKVLNVGGGFGIAYTKQDDPLPPEAFVQAI 265

Query: 219 -------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
                            +++EPG +IV        TV    +    +  V VD  +  ++
Sbjct: 266 VTTLKTQSHGFNWPLPAVWIEPGRSIVGPAGYSLYTVGSRKDVPGLRPYVAVDGGMGDNI 325

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +     A            + G+ C +GDI  +       + GD ++  D   
Sbjct: 326 RPALYQAQYTAVVANHPTAQPTEHVHLVGKYCESGDILIDDAPLPATQPGDVVAVFDTGA 385

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  + +N    P +           +   +Y D   
Sbjct: 386 YGYSMASNYNRNPRPAVVFVEDGQAQLVVTRETYADLIQ 424


>gi|315503932|ref|YP_004082819.1| diaminopimelate decarboxylase [Micromonospora sp. L5]
 gi|315410551|gb|ADU08668.1| diaminopimelate decarboxylase [Micromonospora sp. L5]
          Length = 461

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 58/398 (14%), Positives = 122/398 (30%), Gaps = 38/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+  L                 +  A K F    +   + +        +  E
Sbjct: 62  GTPAYVLDEDDLRERCREFRAAF--PDADVYYAGKAFLCRAVVRMIAEEGMFLDVCTGGE 119

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117
           +          E   ++   K       AV +    II ++ +++++  + A++  +  K
Sbjct: 120 LATALSAGMPPERIGFHGNNKSVAELTRAVDAGVGRIIVDSFTEIDRLSELARERGVRPK 179

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G               ++ ++  + GL  H   +
Sbjct: 180 VLVRVTVGVEAHTHEFIATAHEDQKFGFSLAGGAAAAAAFKILDEDVLELRGLHSHIGSQ 239

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP----VKDFCQRLKE 220
                 F      +L    +       ++  + LGGG               D  +RL++
Sbjct: 240 IFDASGFEVSARRVLALQSQIRDARGVELPELDLGGGFGIAYTTQDDPASPHDLAKRLRK 299

Query: 221 FSEKYS-------VQIYLEPGEAIVTNTTTLNTT------VLDISENIKNLVIVDSSVEA 267
             +            + +EPG AIV               V  +   +     +  ++  
Sbjct: 300 IVDGECAAENLAVPHLSVEPGRAIVGPAVFTLYQAGTVKDVDGLRTYVSVDGGMSDNIRT 359

Query: 268 HVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326
            + D       A       P  A V G+ C +GDI  +  F    V+ GD ++      Y
Sbjct: 360 ALYDASYSATLANRTSTAPPMLARVVGKHCESGDIVVKDEFLPADVQPGDLVAVPGTGAY 419

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N +  P +           +R  + +D   
Sbjct: 420 CRSMASNYNHVPRPPVVAVREGRARLIVRRETEDDLLA 457


>gi|228932803|ref|ZP_04095673.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228826853|gb|EEM72617.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 449

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 59/400 (14%), Positives = 122/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 41  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 100

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+       F      ++   K  E    A+ +N    + +   +L    D A +    
Sbjct: 101 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFLELEILHDLAVQHGEF 160

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G         +  +  ++    NV G+  H  
Sbjct: 161 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 220

Query: 167 CENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F   ++ + +            ++ +++GGG      +              
Sbjct: 221 SQIFETAGFVRAIEVLHQFLEEVRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 280

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +           +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 281 TSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 340

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +    T  + G+ C +GD+         V   D ++      
Sbjct: 341 RPALYNARYEAMLANRGNDENEETVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 400

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 401 YGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGN 440


>gi|237749545|ref|ZP_04580025.1| diaminopimelate decarboxylase [Oxalobacter formigenes OXCC13]
 gi|229380907|gb|EEO30998.1| diaminopimelate decarboxylase [Oxalobacter formigenes OXCC13]
          Length = 428

 Score =  219 bits (557), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 61/400 (15%), Positives = 126/400 (31%), Gaps = 36/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA-----GVKLLLALKCFAAWGMFDTLNQYMDGTTS 57
            TP Y+  K+ L+ N        K          +  ++K  +   + + L Q   G   
Sbjct: 27  GTPLYVYSKKALVENFRQYADTCKRFESDKIHSLVCYSVKSNSNLAILNILGQEGAGFDI 86

Query: 58  SSLYEV-MLGHEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL 114
            S  E+  +           ++   K       A+  +       + ++L++    AQ++
Sbjct: 87  VSGGELQRVIAAGCDPRKVIFSGVGKTANEIGLALKHDIHCFNIESFAELHRINQVAQEM 146

Query: 115 HKKIG--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHN 165
            K+     R+NP+V              ++ G   ++ +            +V G+  H 
Sbjct: 147 GKQARVSFRVNPNVDPKTHPYISTGLKENKFGIPYEEALACYKAAASMTNIDVTGIDCHI 206

Query: 166 NCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---- 218
             +          L    ++  +       ++ I +GGGI  T  D         L    
Sbjct: 207 GSQLLDDAPLLEALDKLLHLVDQLSEEGITLKHIDIGGGIGITYDDEKPVAISDYLTRLF 266

Query: 219 -------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVP 270
                  K+     S+ +  EPG +I  N   L T V  +   + KN  IVD+++   + 
Sbjct: 267 TRVENWRKQKHPDQSIGLMFEPGRSISGNAGLLLTQVQYLKTNSDKNFAIVDAAMNDLMR 326

Query: 271 DYLLYQES---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
             L                  +  + G  C +GD   +      ++  D ++      Y 
Sbjct: 327 PSLYEAWHKVLPVSNRKGEATSYDIVGPVCESGDWLAKQRELV-IQADDILAIMSAGAYG 385

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367
           +   + +N        + +        R  +  + +   S
Sbjct: 386 MAMASNYNTRGRAAEVLVDNGNAYLIRRRETPEELFALES 425


>gi|229016774|ref|ZP_04173704.1| Diaminopimelate decarboxylase [Bacillus cereus AH1273]
 gi|229022979|ref|ZP_04179496.1| Diaminopimelate decarboxylase [Bacillus cereus AH1272]
 gi|228738285|gb|EEL88764.1| Diaminopimelate decarboxylase [Bacillus cereus AH1272]
 gi|228744510|gb|EEL94582.1| Diaminopimelate decarboxylase [Bacillus cereus AH1273]
          Length = 449

 Score =  219 bits (557), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 60/400 (15%), Positives = 121/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 41  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 100

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F      ++   K  E    A+ +N    + +   +L    D A      
Sbjct: 101 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 160

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G         +  +  ++    NV G+  H  
Sbjct: 161 VNILIRVTPGVEAHTHEYITTGQEDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 220

Query: 167 CENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVK---------- 212
            +      F   ++ + +            ++ +++GGG      +              
Sbjct: 221 SQIFETAGFVRAIEVLRQFLEEVRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVHAV 280

Query: 213 -DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +      E    +I++EPG +IV +  T   TV  + E       V     +  ++
Sbjct: 281 TSTIREQFTVCEYPLPEIWIEPGRSIVGDAGTTIYTVGAVKEIPGIRKYVSVDGGMTDNL 340

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +       + G+ C +GD+         V   D ++      
Sbjct: 341 RPALYGARYEAMLANRGNDENEELVSIAGKCCESGDMLIWDINLPQVAPSDLLAISCTGA 400

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 401 YGYSMANNYNRIRRPAVVFAKGGTSQIVVERETYENIIGN 440


>gi|52143926|ref|YP_082902.1| diaminopimelate decarboxylase [Bacillus cereus E33L]
 gi|51977395|gb|AAU18945.1| diaminopimelate decarboxylase [Bacillus cereus E33L]
          Length = 438

 Score =  219 bits (557), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 59/400 (14%), Positives = 121/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 30  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F      ++   K  E    A+ +N    + +   +L    D A      
Sbjct: 90  GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G         +  +  ++    NV G+  H  
Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F   ++ + +            ++ +++GGG      +              
Sbjct: 210 SQIFETAGFVRAIEVLHQFLEELRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +           +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 270 TSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +    T  + G+ C +GD+         V   D ++      
Sbjct: 330 RPALYNARYEAMLANRGNDENEETVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 390 YGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGN 429


>gi|258538295|ref|YP_003172794.1| diaminopimelate decarboxylase [Lactobacillus rhamnosus Lc 705]
 gi|257149971|emb|CAR88943.1| Diaminopimelate decarboxylase [Lactobacillus rhamnosus Lc 705]
          Length = 447

 Score =  219 bits (557), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 64/399 (16%), Positives = 128/399 (32%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           +TP Y+ D   + + +     + + AGV   +  A K FA   M++            S 
Sbjct: 26  QTPLYVYDVGAIRHQIRAFKQVFETAGVAYAVSYASKAFATIAMYEVAKAEAIHVDVVSG 85

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKD--KAQKLH 115
            E+       F  +  +++   K       A+ +   TII +   +L+   +  KA    
Sbjct: 86  GELYTAQAAGFPMDKVSFHGNNKSKAELEQALDAGVGTIIVDNFHELDLLDELLKAAVGK 145

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           + + +R+ P +S          +  S+ G         E  K  +  +  N+ G+  H  
Sbjct: 146 QNVLIRVAPGISAHTHAYDQTGQTDSKFGFDLESGQADEAAKRILADDHLNLLGIHAHIG 205

Query: 167 CENKSFLCFSAMLKNI----EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---- 218
            +      F A+ + +    +     F    + +++GGG              +      
Sbjct: 206 SQIFEVAGFEAVTQKLLAVLDHWHQQFGFIPKVLNVGGGFGIAYTKQDDPLPPEAFVQAI 265

Query: 219 -------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
                            +++EPG +IV        TV    +    +  V VD  +  ++
Sbjct: 266 VTTLKIQSHGFNWPLPAVWIEPGRSIVGPAGYSLYTVGSRKDVPGLRPYVAVDGGMGDNI 325

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +     A            + G+ C +GDI  +         GD ++  D   
Sbjct: 326 RPALYQAQYTAVVADHPTAQPTERVHLVGKYCESGDILIDDAPLPATHPGDVVAVFDTGA 385

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  + +N    P +           +   +Y D   
Sbjct: 386 YGYSMASNYNRNPRPAVVFVENGQAQLVVTRETYADLIQ 424


>gi|223042044|ref|ZP_03612221.1| diaminopimelate decarboxylase [Actinobacillus minor 202]
 gi|223017161|gb|EEF15596.1| diaminopimelate decarboxylase [Actinobacillus minor 202]
          Length = 416

 Score =  219 bits (557), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 60/386 (15%), Positives = 115/386 (29%), Gaps = 25/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  +   + + + +   G    S  E
Sbjct: 26  GTPAYIYSRATLERHWHAFDNAFGDHPHLICFAVKSNSNIALLNIMARLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +              ++   K     A             ++S+L++  + A +L K   
Sbjct: 86  LERVLVAGGDASKVVFSGVAKSHTEIARALEVGIRCFNVESISELHRINEVAGQLGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G   +   E            + G+  H   +  
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVQQAREVYRLASRLPNVKITGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F         + ++       +  + LGGG+          +P +     L++  +
Sbjct: 206 ELQPFLDATDRLIILMEQLKEDGILLHHLDLGGGLGVPYHGEEPPHPTEYAKALLEKLKD 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESA--- 279
              ++I LEPG AI  N   L T V  +  N      IVD+ +   +   L         
Sbjct: 266 YQDLEIILEPGRAITANAGILVTKVEYLKTNEDRRFAIVDTGMNDMIRPALYEAYMELTE 325

Query: 280 -TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
                        V G  C   D  G+      +  GD ++      Y     + +N   
Sbjct: 326 VDRSLPREKAVYDVVGPICETSDFLGKERELA-IAEGDLVAMRSAGAYGATMSSTYNSRP 384

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364
                + +           S+ D + 
Sbjct: 385 QAVEIMVDGANCYLIKERASFEDLWR 410


>gi|229550994|ref|ZP_04439719.1| diaminopimelate decarboxylase [Lactobacillus rhamnosus LMS2-1]
 gi|229315589|gb|EEN81562.1| diaminopimelate decarboxylase [Lactobacillus rhamnosus LMS2-1]
          Length = 447

 Score =  219 bits (557), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 64/399 (16%), Positives = 128/399 (32%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           +TP Y+ D   + + +     + + AGV   +  A K FA   M++            S 
Sbjct: 26  QTPLYVYDVGAIRHQIRAFKQVFETAGVAYAVSYASKAFATIAMYEVAKAEAIHVDVVSG 85

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKD--KAQKLH 115
            E+       F  +  +++   K       A+ +   TII +   +L+   +  KA    
Sbjct: 86  GELYTAQAAGFPMDKVSFHGNNKSKAELEQALDAGVGTIIVDNFHELDLLDELLKAAVGK 145

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           + + +R+ P +S          +  S+ G         E  K  +  +  N+ G+  H  
Sbjct: 146 QNVLIRVAPGISAHTHAYDQTGQTDSKFGFDLESGQADEAAKRILADDHLNLLGIHAHIG 205

Query: 167 CENKSFLCFSAMLKNI----EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---- 218
            +      F A+ + +    +     F    + +++GGG              +      
Sbjct: 206 SQIFEVAGFEAVTQKLLAVLDHWHQQFGFIPKVLNVGGGFGIAYTKQDDPLPPEAFVQAI 265

Query: 219 -------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
                            +++EPG +IV        TV    +    +  V VD  +  ++
Sbjct: 266 VTTLKTQSHGFNWPLPAVWIEPGRSIVGPAGYSLYTVGSRKDVPGLRPYVAVDGGMGDNI 325

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +     A            + G+ C +GDI  +         GD ++  D   
Sbjct: 326 RPALYQAQYTAVVADHPTAQPTERVHLVGKYCESGDILIDDAPLPATHPGDVVAVFDTGA 385

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  + +N    P +           +   +Y D   
Sbjct: 386 YGYSMASNYNRNPRPAVVFVENGQAQLVVTRETYADLIQ 424


>gi|30261517|ref|NP_843894.1| diaminopimelate decarboxylase [Bacillus anthracis str. Ames]
 gi|47526713|ref|YP_018062.1| diaminopimelate decarboxylase [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49184346|ref|YP_027598.1| diaminopimelate decarboxylase [Bacillus anthracis str. Sterne]
 gi|165870390|ref|ZP_02215045.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0488]
 gi|167634404|ref|ZP_02392725.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0442]
 gi|167639222|ref|ZP_02397494.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0193]
 gi|170686644|ref|ZP_02877864.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0465]
 gi|170706359|ref|ZP_02896820.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0389]
 gi|177651559|ref|ZP_02934348.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0174]
 gi|190568073|ref|ZP_03020983.1| diaminopimelate decarboxylase [Bacillus anthracis Tsiankovskii-I]
 gi|218902627|ref|YP_002450461.1| diaminopimelate decarboxylase [Bacillus cereus AH820]
 gi|227815733|ref|YP_002815742.1| diaminopimelate decarboxylase [Bacillus anthracis str. CDC 684]
 gi|229600202|ref|YP_002865930.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0248]
 gi|254682418|ref|ZP_05146279.1| diaminopimelate decarboxylase [Bacillus anthracis str. CNEVA-9066]
 gi|254726082|ref|ZP_05187864.1| diaminopimelate decarboxylase [Bacillus anthracis str. A1055]
 gi|254733834|ref|ZP_05191548.1| diaminopimelate decarboxylase [Bacillus anthracis str. Western
           North America USA6153]
 gi|254740474|ref|ZP_05198165.1| diaminopimelate decarboxylase [Bacillus anthracis str. Kruger B]
 gi|254753865|ref|ZP_05205900.1| diaminopimelate decarboxylase [Bacillus anthracis str. Vollum]
 gi|254758960|ref|ZP_05210987.1| diaminopimelate decarboxylase [Bacillus anthracis str. Australia
           94]
 gi|300118533|ref|ZP_07056272.1| diaminopimelate decarboxylase [Bacillus cereus SJ1]
 gi|301053058|ref|YP_003791269.1| diaminopimelate decarboxylase [Bacillus anthracis CI]
 gi|30255371|gb|AAP25380.1| diaminopimelate decarboxylase [Bacillus anthracis str. Ames]
 gi|47501861|gb|AAT30537.1| diaminopimelate decarboxylase [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49178273|gb|AAT53649.1| diaminopimelate decarboxylase [Bacillus anthracis str. Sterne]
 gi|164713885|gb|EDR19407.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0488]
 gi|167512661|gb|EDR88035.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0193]
 gi|167530292|gb|EDR93018.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0442]
 gi|170128893|gb|EDS97759.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0389]
 gi|170669167|gb|EDT19910.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0465]
 gi|172082837|gb|EDT67900.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0174]
 gi|190560807|gb|EDV14782.1| diaminopimelate decarboxylase [Bacillus anthracis Tsiankovskii-I]
 gi|218537180|gb|ACK89578.1| diaminopimelate decarboxylase [Bacillus cereus AH820]
 gi|227003325|gb|ACP13068.1| diaminopimelate decarboxylase [Bacillus anthracis str. CDC 684]
 gi|229264610|gb|ACQ46247.1| diaminopimelate decarboxylase [Bacillus anthracis str. A0248]
 gi|298724057|gb|EFI64760.1| diaminopimelate decarboxylase [Bacillus cereus SJ1]
 gi|300375227|gb|ADK04131.1| diaminopimelate decarboxylase [Bacillus cereus biovar anthracis
           str. CI]
          Length = 438

 Score =  219 bits (557), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 59/400 (14%), Positives = 121/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 30  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F      ++   K  E    A+ +N    + +   +L    D A      
Sbjct: 90  GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G         +  +  ++    NV G+  H  
Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F   ++ + +            ++ +++GGG      +              
Sbjct: 210 SQIFETAGFVRAIEVLHQFLEEVRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +           +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 270 TSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +    T  + G+ C +GD+         V   D ++      
Sbjct: 330 RPALYNARYEAMLANRGNDENEETVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 390 YGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGN 429


>gi|268611237|ref|ZP_06144964.1| diaminopimelate decarboxylase [Ruminococcus flavefaciens FD-1]
          Length = 432

 Score =  219 bits (557), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 68/401 (16%), Positives = 129/401 (32%), Gaps = 38/401 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP Y++D++ + +N        K       ++  A K F+   M   +     G  + S
Sbjct: 30  GTPLYVMDEEMVRSNCSRFRDSMKKFYGEKGEVHYAGKAFSCMEMCRIVASEGIGLDAVS 89

Query: 60  LYEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK 116
           + E+       F  E   ++   K          +    II + +S+L++ +  A    K
Sbjct: 90  IGELYTALKAGFPMEKIGFHGNNKTDAELEFAVDNGVGHIIVDNISELHRLEAIAAAKGK 149

Query: 117 KIGLR--INPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHN 165
           K  +   I P +           +  S+ G   +         + +  E   + GL  H 
Sbjct: 150 KPAVMFRIKPGIDAHTHDFVKTGQIDSKFGFALETGEAFDAVKEALSCENLTLAGLHCHI 209

Query: 166 NCENKSFLCFSAMLKNIEKEFGHFITQIEW----ISLGGGIHFTDKDYPVKDF------- 214
             +      F    K +         ++ +    ++LGGG      +             
Sbjct: 210 GSQIFDIAPFEEAAKVMLGFIAKIKAELGYEVPGLNLGGGFGIKYMEKDDPQPFEVFLER 269

Query: 215 -CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLD------ISENIKNLVIVDSS 264
               +K   EK       +Y+EPG +I         TV        I   I     +  S
Sbjct: 270 VSAVVKGECEKLGLTQPFMYIEPGRSIAAPAGLTLYTVGARKEIPNIRTYISVDGGMADS 329

Query: 265 VEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
               +         A            + G+ C +GD+ GE    +  + GD I+     
Sbjct: 330 PRYILYKSEYEAIVANKANEERTEKVTIAGKCCESGDLIGENMSLQHAESGDIIAVCATG 389

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            YN +  + +N +  P +   N   +  A++  + +D   N
Sbjct: 390 AYNYSMSSNYNRLQKPAVVFVNKGTSRIAVKRETLDDIIRN 430


>gi|325283598|ref|YP_004256139.1| Diaminopimelate decarboxylase [Deinococcus proteolyticus MRP]
 gi|324315407|gb|ADY26522.1| Diaminopimelate decarboxylase [Deinococcus proteolyticus MRP]
          Length = 414

 Score =  219 bits (557), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 59/395 (14%), Positives = 120/395 (30%), Gaps = 29/395 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           + TP++L D++ +  N    +       G +   A+K      +   L +   G   SSL
Sbjct: 19  LPTPFHLYDERGMRENARAFMQAFAWAPGFRNYYAVKAAPTPALLQILAEEGFGADCSSL 78

Query: 61  YEVMLG-HEKFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E+ L       GE   +        E          I  + ++ +   ++       ++
Sbjct: 79  PELELAQRCGITGENIMFTSNDTPPEEFRRAAELGAVINLDDITHIAALEEALGGTLPEL 138

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVNGLMFHNNCENK---- 170
                             N   ++ G   +  ++    ++ K V     H    +     
Sbjct: 139 LSFRYNPGPERTGNAIIGNPVEAKYGVTSEQLLDCYRTAQDKGVGRFALHTMVASNELDA 198

Query: 171 --SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
                    +     +       ++E+++LGGGI    +        Q + +   +    
Sbjct: 199 SFIIETARMLFTLAVRLKEELGIELEFVNLGGGIGIPYRPEQQAMSYQEVSDGIRELYDS 258

Query: 229 IY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
           I             E G  +      L + V  ++   K+ V +D+ +   +   +    
Sbjct: 259 IIRPAGLDGLKLSFECGRVMTGPYGVLVSRVRHVTRKYKDYVGLDACMANLMRPAMYGSY 318

Query: 278 SATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                 N G      T  V G  C   D F        ++ GD +   D   +  +    
Sbjct: 319 HHITVLNKGEDAPRQTVDVTGSLCENNDKFAIDRELPVMQPGDVVVIHDAGAHGHSMGFN 378

Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNLS 367
           +NG       +   DG  + IR   + +D +  LS
Sbjct: 379 YNGKLRSAEYLLRADGRAEMIRRAETMDDLFATLS 413


>gi|313123902|ref|YP_004034161.1| diaminopimelate decarboxylase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312280465|gb|ADQ61184.1| Diaminopimelate decarboxylase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
          Length = 436

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 58/400 (14%), Positives = 127/400 (31%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           +TP  + D  K+   +     + +  GV  ++  A K F+   ++  +N+    T   S 
Sbjct: 31  QTPLQVFDVGKIRQAIRAFKRVFEEEGVDYEVSYASKAFSCLAIYQVINEEGGHTDVVSS 90

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F  +  +++   K      +        II +   +++        +   
Sbjct: 91  GELWTAMKAGFPMDKVSFHGNNKSRAELEMAVDQGVGVIILDNFHEIDLLSQILEEKDAS 150

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNN 166
            K+ LR+ P +S          +  S+ G            +  + +    + G+  H  
Sbjct: 151 SKVMLRVTPGISAHTNEYIQTGQVDSKFGFDMESGQADRALELVLANPRMKMAGIHAHIG 210

Query: 167 CENKSFLCFSAM----LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR----- 217
            +      F        +        +  + + +++GGG      D       +      
Sbjct: 211 SQIFDVRGFVGCADKLCQLASAWKEKYGYETDILNVGGGFGIHYTDQDQPLPAEEFVRAI 270

Query: 218 ---LKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
              +K   ++ +     I++EPG +IV        TV    +       V     +  ++
Sbjct: 271 VKEVKSKCQENNLKLPAIWIEPGRSIVGPAGFSLYTVGSRKDLPGYPSYVALDGGMGDNI 330

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   E + +              + G+ C +GDI  +       + GD ++      
Sbjct: 331 RPALYQAEYSAVVADRPQAEDEERVNLVGKYCESGDILIKSCPLPKTEPGDVVALLSTGA 390

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  + +N    P +           I+  SY+D   N
Sbjct: 391 YGYSMASNYNRNPRPAVVFAEDGVDQLVIKRESYDDLIAN 430


>gi|193213915|ref|YP_001995114.1| diaminopimelate decarboxylase [Chloroherpeton thalassium ATCC
           35110]
 gi|193087392|gb|ACF12667.1| diaminopimelate decarboxylase [Chloroherpeton thalassium ATCC
           35110]
          Length = 417

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 68/386 (17%), Positives = 123/386 (31%), Gaps = 23/386 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P ++  K  +L+         ++       ++K      +   L     G   +S  E
Sbjct: 29  GSPVFVTSKASILSQYHAFEEAFQSLNHLTCYSVKANYNLEVIKVLVDAGCGFDVNSGGE 88

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKA--QKLHKK 117
           +                   K  E      +     I   + S+L    + A    L   
Sbjct: 89  LFRALKAGAEPSKIIMAGVGKTAEEIEYALSTGIMMIKAESQSELILINEIAKKNNLVAP 148

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG-------EKCKDKIESEIKNVNGLMFHNNCENK 170
           +G+R+NP+V               + G       E        E  N+ GL  H   +  
Sbjct: 149 VGIRVNPNVLAETHPYITTGDSEEKFGIDETLAEETFSLIKRLENLNLIGLDMHIGSQIF 208

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSE 223
             L +         ++        +IE I +GGG   T        P+ +F ++L     
Sbjct: 209 DTLPYYEATLKLLGVKNIAESMGFEIEHIDIGGGFPVTYNAEKPATPIAEFAKKLVPILS 268

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDYLLYQESATI 281
             + ++  EPG  +V N + L T VL   +N K+ +   VDS++   +   L       +
Sbjct: 269 NLNAKVIFEPGRYMVANASVLLTKVLYRKQNYKDKIFLIVDSAMTELLRPSLYKSHHDVL 328

Query: 282 YPNTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                     A + G  C +GD F        V+ G+ ++      Y     + +N    
Sbjct: 329 AVAKKDNEILADIVGPVCESGDFFARARKVGDVQEGELLAVMSSGAYGSVMGSNYNARLK 388

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365
           P   + + D      +  SY     N
Sbjct: 389 PAEVLVSGDAHKLIRKRESYEQLIQN 414


>gi|269128137|ref|YP_003301507.1| diaminopimelate decarboxylase [Thermomonospora curvata DSM 43183]
 gi|268313095|gb|ACY99469.1| diaminopimelate decarboxylase [Thermomonospora curvata DSM 43183]
          Length = 461

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 57/398 (14%), Positives = 123/398 (30%), Gaps = 38/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D++ +           +     +  A K F    +   L++   G    +  E
Sbjct: 61  GTPLYVYDEEDVRQRAREYATAFQ--DGSVHYAGKAFLCTALLRWLDEEGLGLDVCTGGE 118

Query: 63  VMLGHE-KFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117
           + +     F  E    + + K       A+ +    ++ ++  ++ +    AQ+     K
Sbjct: 119 LAVALAAGFPPEKITMHGSNKSLAELERALEAGVGRVVIDSFEEIARLGYLAQEKGARPK 178

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G         E  +  ++     + GL  H   +
Sbjct: 179 VMIRVTTGVEAHTHEFIATAHDDQKFGFSRTTGAALEAVRRVLQLPQLELVGLHSHIGSQ 238

Query: 169 NKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F      + ++          ++  + LGGG              + + +  ++
Sbjct: 239 IFDTDGFEVAAHRLAEQLVAIRDEHGLELPELDLGGGYGIAYVPGDEPHDPKAIADSLKE 298

Query: 225 Y-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271
                         +I +EPG AIV         V  + +    +  V VD  +  ++  
Sbjct: 299 IVARECRAYGLAMPRITVEPGRAIVGPGGVTLYEVGTVKDVEGLRTYVSVDGGMSDNLRT 358

Query: 272 YLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326
            L   E   +         P  + + G+ C +GDI     +    V  GD ++      Y
Sbjct: 359 ALYGAEYTCVLASRSSRAEPMLSRLVGKHCESGDIVVRDLWLPRDVTAGDVVAVAATGAY 418

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N +  P +           IR  +  D   
Sbjct: 419 CRSMASNYNFVPRPAVVAVRDGKARVLIRRETEEDLLR 456


>gi|295677895|ref|YP_003606419.1| diaminopimelate decarboxylase [Burkholderia sp. CCGE1002]
 gi|295437738|gb|ADG16908.1| diaminopimelate decarboxylase [Burkholderia sp. CCGE1002]
          Length = 420

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 56/387 (14%), Positives = 119/387 (30%), Gaps = 26/387 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L    +            + +A+K  +   + +   +   G    S  E
Sbjct: 28  GTPLYVYSRAALTAAWNAYAGACAGRRASVHVAVKANSNLAVLNVFARLGAGFDIVSGGE 87

Query: 63  VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +          E   ++   K      DA+++        ++ +L++    A        
Sbjct: 88  LARVLAAGGKAENTVFSGVGKQASEMRDALVAGVKCFNVESIPELDRLNAVAGEMGKKAP 147

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G   +D               V G+  H   +  
Sbjct: 148 VSLRVNPDVDAKTHPYISTGLKTNKFGVAFEDARATYQAAAAMANLEVVGIDCHIGSQIT 207

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               +   +  +    ++       I  I +GGG+  T  D    +  + ++   ++   
Sbjct: 208 EVAPYLDAIDKVLELVEQIEQDGVSIRHIDVGGGLGITYDDETPPEIGEFVRTVLDRIEA 267

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278
                 ++Y EPG ++V N   L T +  +     KN  IVD+++       +       
Sbjct: 268 RGHGHREVYFEPGRSLVGNAGVLLTRLEFLKPGEDKNFAIVDAAMTDLARPAMYDAYHAI 327

Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
              +  +   +   V G  C +GD  G       V+ GD ++      Y     + +N  
Sbjct: 328 EPVVKRDVPAHVYDVVGPVCESGDWLGRERLLA-VEPGDLLAIRSAGAYGFVMSSNYNTR 386

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
                 + +                + 
Sbjct: 387 ARAAEVMVDGTQAHVVRAREEVKQLFA 413


>gi|196042182|ref|ZP_03109464.1| diaminopimelate decarboxylase [Bacillus cereus NVH0597-99]
 gi|196026955|gb|EDX65580.1| diaminopimelate decarboxylase [Bacillus cereus NVH0597-99]
          Length = 438

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 59/400 (14%), Positives = 122/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 30  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115
            E+       F      ++   K  E    A+ +N    + +   +L    D A +    
Sbjct: 90  GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFLELEILHDLAVQNGKF 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G         +  +  ++    NV G+  H  
Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F   ++ + +            ++ +++GGG      +              
Sbjct: 210 SQIFETAGFVRAIEVLHQFLEEVRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +           +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 270 TSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +    T  + G+ C +GD+         V   D ++      
Sbjct: 330 RPALYNARYEAMLANRGNDENEETVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 390 YGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGN 429


>gi|89073050|ref|ZP_01159597.1| carboxynorspermidine decarboxylase [Photobacterium sp. SKA34]
 gi|89051268|gb|EAR56724.1| carboxynorspermidine decarboxylase [Photobacterium sp. SKA34]
          Length = 366

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 171/361 (47%), Positives = 242/361 (67%), Gaps = 3/361 (0%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE 68
           ID+QKL+NNL+ A  +++ +GVKL+LALKCF+ WG+FD +  Y+DGTTSS  +EV LG E
Sbjct: 2   IDEQKLINNLEQAKKLKQLSGVKLVLALKCFSTWGVFDVMKPYLDGTTSSGPFEVRLGAE 61

Query: 69  KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY 128
           KFGGETHAY+V Y   +++ VL  C+ IIFN+VSQL   +  A      +GLR+NP +S 
Sbjct: 62  KFGGETHAYSVGYSQEDVEEVLQYCNKIIFNSVSQLQANRHLADGKAS-VGLRLNPGISC 120

Query: 129 SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH 188
           +   LADP R +SRLG +    I+    +++G MFH NCENKS   F A+L +I + FG 
Sbjct: 121 AGQDLADPARQYSRLGVQENLLIDELFDDLDGAMFHMNCENKSADAFIALLDSISERFGR 180

Query: 189 FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248
           ++ +++W+SLGGG+ FT  DY ++     LK F+E++ VQ+YLEPGEAI+T TT L  TV
Sbjct: 181 YLEKLDWVSLGGGVFFTWPDYELEKLAAALKIFAERFDVQLYLEPGEAIITQTTDLAVTV 240

Query: 249 LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLAGDIFGEF 306
           +DI EN     IVDS+ EAH  D L+Y E ATI      G +  ++   SCLAGD F   
Sbjct: 241 VDIVENGIKTAIVDSATEAHRLDTLIYNEPATISEASEKGNHQYVIGSCSCLAGDQFCVA 300

Query: 307 HFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366
           +FE+P+ IG ++   D AGY + + NWFNG+ MP+I  + +DG ++ + EF+Y D+ ++L
Sbjct: 301 NFEQPLAIGQKLHIADSAGYTMVKLNWFNGLRMPSIYCRRIDGAVEKLNEFTYQDFESSL 360

Query: 367 S 367
           S
Sbjct: 361 S 361


>gi|320008557|gb|ADW03407.1| diaminopimelate decarboxylase [Streptomyces flavogriseus ATCC
           33331]
          Length = 463

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 60/398 (15%), Positives = 116/398 (29%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y +D+          +         +  A K F +  +   L +        S  E
Sbjct: 63  GTPAYFLDESDFRARCRAWVDAF-GTDADVFYAGKAFLSRAVVRWLAEEGLNLDVCSGGE 121

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSN--CDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +          E  A++   K               I+ ++  ++ +    AQ+L  +  
Sbjct: 122 LATALDAGMPAERIAFHGNNKTVAEIERAVGAGVGRIVLDSFQEIARVSHIAQRLGTRQR 181

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168
             +R+   V               + G    D          +  +   + G+  H   +
Sbjct: 182 VQIRVTVGVEAHTHEFIATAHEDQKFGIALADGQAAEAVRRALTLDGLELIGIHSHIGSQ 241

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F      +++ + +       ++  I LGGG+               + +    
Sbjct: 242 IFDMAGFEVSARRVVQLLAEVRDEHGVELPEIDLGGGLGIAYTSDDDPREPHEIAKALGD 301

Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271
                       + +I +EPG AIV  T      V  I      +  V VD  +  ++  
Sbjct: 302 IVTRECESAGLRTPRISVEPGRAIVGPTAFTLYEVGTIKPLEGLRTYVSVDGGMSDNIRT 361

Query: 272 YLLYQESATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326
            L   E +        +  P    V G+ C +GDI  +  F    +  GD I+      Y
Sbjct: 362 ALYDAEYSVALVSRSSDAEPMLVRVVGKHCESGDIVVKDAFLPSDLAPGDLIAVPATGAY 421

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N    P +           +R  +  D   
Sbjct: 422 CRSMASNYNHALRPPVVAVRDGQARVIVRRETEEDLLR 459


>gi|217031512|ref|ZP_03437017.1| hypothetical protein HPB128_21g70 [Helicobacter pylori B128]
 gi|298736763|ref|YP_003729293.1| diaminopimelate decarboxylase [Helicobacter pylori B8]
 gi|216946712|gb|EEC25308.1| hypothetical protein HPB128_21g70 [Helicobacter pylori B128]
 gi|298355957|emb|CBI66829.1| diaminopimelate decarboxylase [Helicobacter pylori B8]
          Length = 405

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 69/385 (17%), Positives = 123/385 (31%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP+YL D  K+           K     +  ALK  +   +   L     G    S+ E
Sbjct: 12  KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGE 71

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++   K        +  N   +   +  +L   +  AQ L  K  
Sbjct: 72  IYRALKAGIKPYRIVFSGVGKSGFEIEQALKLNILFLNVESFMELTTIEKIAQSLGIKAR 131

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           +  RINP++              ++ G   K+ +E       S       + FH   +  
Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHFHIGSQLL 191

Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224
                      +  I K        + +  +GGGI  + ++       D+ Q +    + 
Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILNSLQG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I  EPG +IV  +  L T VL       K  V+VD+ +   +   L + + A    
Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVVVDAGMNDFLRPSLYHAKHAIRVI 311

Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       V G  C + D F +      ++ GD+I+ E V  Y  +  + +N    
Sbjct: 312 TPSKGRKISPCDVVGPVCESSDTFLKDARLPELEPGDKIAIEKVGAYGSSMASQYNSRPK 371

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
                          +  +  D + 
Sbjct: 372 LLELALEDHKIRVIRKREALEDLWR 396


>gi|238021782|ref|ZP_04602208.1| hypothetical protein GCWU000324_01685 [Kingella oralis ATCC 51147]
 gi|237866396|gb|EEP67438.1| hypothetical protein GCWU000324_01685 [Kingella oralis ATCC 51147]
          Length = 403

 Score =  218 bits (556), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 66/385 (17%), Positives = 124/385 (32%), Gaps = 24/385 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L                 +  A+K      +     Q   G  + S  E
Sbjct: 14  GTPLYVYHQAALTAAFAAYQTAFSGCQPLVCYAVKANGNLSVIRHFAQLGSGFDTVSAGE 73

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--K 117
           +              ++   K         N         ++ +L +  D A +L K   
Sbjct: 74  IARVLAAGGDASKIIFSGVGKTEAEMEYALNAGIKCFNVESLPELERLNDVAGRLGKIAP 133

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I  RINP V              ++ G   +D  ++           + G+  H   +  
Sbjct: 134 ISFRINPDVDAKTHPYISTGLKANKFGIAMRDAEQAYQRAASLPHIKIIGVDCHIGSQLT 193

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                 A  +    +  +       ++ + LGGG+    KD     +  + Q ++   + 
Sbjct: 194 DLSPLIAACERLIALIDKLSAQGIALQHLDLGGGVGIVYKDEHTPDLHAYAQAVEPLLKA 253

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESA---T 280
             + + LEPG ++V N   L T V  +     KN V+VD+++   +   L     A    
Sbjct: 254 RGLSLVLEPGRSLVGNAGVLLTRVEYVKHGEEKNFVVVDAAMNDLMRPALYQAYHAVENV 313

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
             P+    TA + G  C  GD  G+       + GD ++      Y  +  + +N     
Sbjct: 314 SRPDAPQITADIVGPICETGDFIGKERQIGAAQ-GDILAIRSAGAYASSMASNYNARCRA 372

Query: 341 TIAVKNVDG-TIKAIREFSYNDYYN 364
              + +  G +    R  + +D   
Sbjct: 373 AEVMIDEQGNSRLVRRRETMDDLLA 397


>gi|330469869|ref|YP_004407612.1| diaminopimelate decarboxylase [Verrucosispora maris AB-18-032]
 gi|328812840|gb|AEB47012.1| diaminopimelate decarboxylase [Verrucosispora maris AB-18-032]
          Length = 461

 Score =  218 bits (556), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 58/398 (14%), Positives = 119/398 (29%), Gaps = 38/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+  L +               +  A K F    +   + +        S  E
Sbjct: 62  GTPVYVLDEGDLRSRCRDFRAAFPTED--VYYAGKAFLCRAVVRMIAEEGMFLDVCSGGE 119

Query: 63  VMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117
           + +        E   ++   K       A+ +    II ++ +++++    A++  +  +
Sbjct: 120 LAVALAAGMPPERIGFHGNNKSEAELRRALDAGVGRIIVDSFAEIDRLTALARERAVRPR 179

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK---------NVNGLMFHNNCE 168
           + +R+   V               + G                      + GL  H   +
Sbjct: 180 VLIRVTVGVEAHTHEFIATAHEDQKFGFSLAGGAAIAAALRILDEGVLELRGLHSHIGSQ 239

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP----VKDFCQRLKE 220
                 F      +L    +       ++  + LGGG               D  +RL++
Sbjct: 240 IFDTSGFEVSARRVLALQAQIRDARGVELPELDLGGGFGIAYTSQDDPAAPHDLAKRLRK 299

Query: 221 FSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271
             +            + +EPG AIV         V  + +       V     +  ++  
Sbjct: 300 IVDSECAAEQLAVPHLSIEPGRAIVGPAVFTLYEVGTVKDVDGIRTYVSVDGGMSDNIRT 359

Query: 272 YLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326
            L         A+      P  A V G+ C +GDI  +  F    V+ GD ++      Y
Sbjct: 360 ALYDASYSATLASRASTAEPMLARVVGKHCESGDIVVKDEFLPADVQPGDLVAVPGTGAY 419

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N +  P +           +R  +  D   
Sbjct: 420 CRSMASNYNHVPRPPVVAVRDGQARLIVRRETEADLLA 457


>gi|114326793|ref|YP_743950.1| diaminopimelate decarboxylase [Granulibacter bethesdensis CGDNIH1]
 gi|114314967|gb|ABI61027.1| diaminopimelate decarboxylase [Granulibacter bethesdensis CGDNIH1]
          Length = 448

 Score =  218 bits (556), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 56/384 (14%), Positives = 112/384 (29%), Gaps = 26/384 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP ++                   AG    +  A+K      +   L     G    S 
Sbjct: 49  GTPCWVYSAGTFRRRYRLLRDALAEAGIAPHIHFAVKANDHLAVLRLLGNEGAGADVVSG 108

Query: 61  YEVMLGHE-KFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+         GE   ++   K       A+      I   +  +L      A  + + 
Sbjct: 109 GELSRARAAGIPGERIVFSGVGKTAAELTLALSEGIAQINVESAEELEMLSAIACGMGRT 168

Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEKCKD-----KIESEIKNVN--GLMFHNNCE 168
               LR+NP V              ++ G +  D        + +  +   GL  H   +
Sbjct: 169 ARIALRVNPDVDAGTHPKITTGLADNKFGIQAGDVPALYARAASLPGIEPVGLAMHIGSQ 228

Query: 169 NKSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFS 222
                 F A  + +    +        +  +  GGG+    +             +K   
Sbjct: 229 INVMTPFLAAFRRMAILVQALRDQGLTVRLVDCGGGLGIDYRGDVTSTPAALAGAMKAEL 288

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES--- 278
               VQ+ LEPG  +      L ++V+ + ++     +V D+++   +   L        
Sbjct: 289 GGLDVQLVLEPGRWLAGPAGVLLSSVVLVKQSRPRPFVVLDAAMNDLLRPSLYEAWHGIV 348

Query: 279 --ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
             + +     P    V G  C  GD F       P++ G R++  +   Y     + +N 
Sbjct: 349 PLSAVEAAHMPIDCDVVGPVCETGDTFARSRSLPPLQGGSRVAILEAGAYGAVMSSTYNA 408

Query: 337 INMPTIAVKNVDGTIKAIREFSYN 360
             +    + +           + +
Sbjct: 409 RPLAAQVLVDDGHWAVIRPRQTVD 432


>gi|255523462|ref|ZP_05390431.1| diaminopimelate decarboxylase [Clostridium carboxidivorans P7]
 gi|296184745|ref|ZP_06853156.1| diaminopimelate decarboxylase [Clostridium carboxidivorans P7]
 gi|255512920|gb|EET89191.1| diaminopimelate decarboxylase [Clostridium carboxidivorans P7]
 gi|296050527|gb|EFG89950.1| diaminopimelate decarboxylase [Clostridium carboxidivorans P7]
          Length = 432

 Score =  218 bits (556), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 62/400 (15%), Positives = 127/400 (31%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ID+  +             +    ++  A K F    M   +N         S 
Sbjct: 29  GTPLYVIDEALVREQCKRYYKAFNVEQGENRVAYAGKAFLTLAMCQMINSEGLYLDVVSG 88

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLH-- 115
            E+    +  F  E   ++   K  E   +         + +   +++K    A++ +  
Sbjct: 89  GELYTALKSDFPMEKVYFHGNNKTLEEIEMGISLGVGRFVVDNFDEIDKINAVAKEKNKV 148

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK---------IESEIKNVNGLMFHNN 166
           + I LRI P +           +  S+ G    +          IE     + GL  H  
Sbjct: 149 QSILLRITPGIEAHTHDYIKTGQIDSKFGFTMLEHNTMNAVKKSIELTNIELKGLHCHIG 208

Query: 167 CENKSFLCFSAMLKNI----EKEFGHFITQIEWISLGGGIHFTDKDYPVKDF-------- 214
            +      +   ++ +    +        +++ + LGGG     K+              
Sbjct: 209 SQIFDIKPYEDEVEIMLSIVKSIKDEMGYELKELDLGGGFGIYYKEGDTPQKIEDFCEII 268

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               + + +       ++ +EPG +I+ N  +   TV  I E       +     +  ++
Sbjct: 269 LSKAESVGKELGIKLPKLVIEPGRSIIGNAGSTLYTVGSIKEIPGIRKYISVDGGMTDNI 328

Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   E   +  +           V G+ C +GDI          K+GD +   +   
Sbjct: 329 RPALYNAEYECVVADKVESEFTERVSVAGKCCESGDILLNGIEIPEAKVGDIMVVLNTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P + +   +      R  +++    N
Sbjct: 389 YGYSMSNNYNKIPKPAVVLVKDEEVKVICRRQNFDQILEN 428


>gi|119357521|ref|YP_912165.1| diaminopimelate decarboxylase [Chlorobium phaeobacteroides DSM 266]
 gi|119354870|gb|ABL65741.1| diaminopimelate decarboxylase [Chlorobium phaeobacteroides DSM 266]
          Length = 435

 Score =  218 bits (556), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 63/386 (16%), Positives = 117/386 (30%), Gaps = 23/386 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++  K+ L+   +               ++K      +  T  +   G   +S  E
Sbjct: 47  GTPLFVTSKKNLITRYNEFEEAFSGLPHFTCYSVKANFNLSVIKTFGELGCGCDVNSGGE 106

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +          E   +       +    A+ S    +   ++S+L      A +      
Sbjct: 107 LYRALQAGVSPEKIIFAGVGKKAEEIAYALRSGVLMLKAESLSELAVIDRIAAESGNVAL 166

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170
             +RINP+V+              + G    +         E +   + GL  H   +  
Sbjct: 167 VAIRINPNVTAETHPYITTGDSKEKFGIDEGELDAVLMLLSELKHVRLAGLDMHIGSQIF 226

Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSE 223
               + A    +             IE+  +GGG   T        P+  F ++L     
Sbjct: 227 DPEYYVAATIKLLAILERVKAQGFAIEYFDIGGGFPVTYDPAKQATPIAQFAEKLIPLLR 286

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDYLLYQESAT- 280
              V++  EPG  +V N + L T +L   +N   K   IVD+ +   +   L        
Sbjct: 287 PAGVKVIFEPGRFLVANASVLLTRILYRKQNHTGKQFFIVDAGMTELIRPALYQSHHEVL 346

Query: 281 -IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            +  +     A V G  C + D F           G+ ++      Y     + +NG   
Sbjct: 347 AVTRHKESVEADVVGPVCESSDFFARHRTIDDAAEGELLAVMSSGAYAAVMSSNYNGRLR 406

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365
           P   + +           +Y     N
Sbjct: 407 PAEVLVDGQDVRLVRTRETYEQLIQN 432


>gi|15644918|ref|NP_207088.1| diaminopimelate decarboxylase (dap decarboxylase) (lysA)
           [Helicobacter pylori 26695]
 gi|2499346|sp|P56129|DCDA_HELPY RecName: Full=Diaminopimelate decarboxylase; Short=DAP
           decarboxylase
 gi|2313384|gb|AAD07356.1| diaminopimelate decarboxylase (dap decarboxylase) (lysA)
           [Helicobacter pylori 26695]
          Length = 405

 Score =  218 bits (556), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 68/385 (17%), Positives = 122/385 (31%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP+YL D  K+           K     +  ALK  +   +   L     G    S+ E
Sbjct: 12  KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGE 71

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++   K        +  N   +   +  +L   +  AQ L  K  
Sbjct: 72  IYRALKAGIKPYRIVFSGVGKSGFEIEQALKLNILFLNVESFMELTTIETIAQSLGIKAR 131

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           +  RINP++              ++ G   K+ +E       S       + FH   +  
Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHFHIGSQLS 191

Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224
                      +  I K        + +  +GGGI  + ++       D+ Q +    + 
Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILNSLQG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I  EPG +IV  +  L T VL       K  V+VD+ +   +   L + + A    
Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVVVDAGMNDFLRPSLYHAKHAIRVI 311

Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       V G  C + D F +      ++ GD++  E V  Y  +  + +N    
Sbjct: 312 TPSKGREISPCDVVGPVCESSDTFLKDAHLPELEPGDKLVIEKVGAYGSSMASQYNSRPK 371

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
                          +  +  D + 
Sbjct: 372 LLELALEDHKIRVIRKREALEDLWR 396


>gi|319778683|ref|YP_004129596.1| Diaminopimelate decarboxylase [Taylorella equigenitalis MCE9]
 gi|317108707|gb|ADU91453.1| Diaminopimelate decarboxylase [Taylorella equigenitalis MCE9]
          Length = 428

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 54/388 (13%), Positives = 114/388 (29%), Gaps = 27/388 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR-KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++P+ L  K+ + +  D    I  K     +  A+K  +   +         G    S  
Sbjct: 35  ESPFVLYSKKAIESAWDGYKNILGKYPNSLICYAVKANSNLSLLKLFVSLGAGFDIVSGG 94

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+    E         ++   K       A+ S        +  +L      A++L  K 
Sbjct: 95  ELKRCLEVGADTNKIIFSGVGKQSWEIKLALESGIKCFNVESEFELENIATIARELGLKA 154

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
              LR+NP +              ++ G      ++  +         + G+  H   + 
Sbjct: 155 RISLRVNPDIDARTHPYISTGLKENKFGIDFSRALDVYLYAASIDALEIVGIDCHIGSQI 214

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY- 225
                +      +    ++       +  + +GGG+     +    D          K  
Sbjct: 215 LEIEPYLDAADRVIELIRQIRSHGIYLSHLDIGGGVGIRYSNENPIDIVCLRASIDAKLR 274

Query: 226 -----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES- 278
                 + + +EPG ++V N+  L   VL I +       I+++ +   +   L      
Sbjct: 275 SAGLEHMLVIMEPGRSLVGNSAILVAQVLGIKKTDYKNFAIINAGMNDLIRPSLYEAYHG 334

Query: 279 --ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                          + G  C  GD   +      ++ GD I  E V  Y  +  + +N 
Sbjct: 335 VLPVQIRKGEATKYDIVGPICETGDWLAKDRKLV-LQAGDLIVIESVGAYGTSMASNYNS 393

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364
                  + +        +     D + 
Sbjct: 394 RPFLAEYLVDDAELCMIRKAQGLEDIWR 421


>gi|255534252|ref|YP_003094623.1| Diaminopimelate decarboxylase [Flavobacteriaceae bacterium 3519-10]
 gi|255340448|gb|ACU06561.1| Diaminopimelate decarboxylase [Flavobacteriaceae bacterium 3519-10]
          Length = 399

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 67/385 (17%), Positives = 120/385 (31%), Gaps = 26/385 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D + +    +        +  +   A K  +   +   +          S+ E
Sbjct: 14  GTPTYVYDAESIKEQYEKLTSSFHKS-TRFFYACKALSNINILKYVKNLGGSLDCVSINE 72

Query: 63  VMLGH-EKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           V LG    F  +   +     D  EI+  ++    I  + +S L +F +K       I +
Sbjct: 73  VKLGLKAGFEAKKILFTPNCVDLAEIEEAMALNVHINIDNISILEQFGNKYGG-SYPIFV 131

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESE------IKNVNGLMFHNNCENKSFLC 174
           RINP +              S+ G         E        NV GL  H   E K    
Sbjct: 132 RINPHIFAGGNYKISTGHIDSKFGISIHQLRHIERVMKTTNLNVEGLHMHTGSEIKDPDV 191

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK---------- 224
           F   L  +  E       ++++ +G G     ++  ++   + L +  EK          
Sbjct: 192 FLQGLDIM-FELAEHFPNLKYLDMGSGFKVPYQEGDIETDVKTLGKKVEKALSEFSKSSG 250

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLL--YQESATI 281
              +++ EPG+ +V+ +  L      I +        ++S     +       Y +   +
Sbjct: 251 KKFELWFEPGKYLVSKSGNLLVKTNVIKQTTATVFAGINSGFNHLIRPMFYDSYHKIDNL 310

Query: 282 YPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
               G      V G  C   D F         + GD + F +   Y     + FN    P
Sbjct: 311 SNPKGAQRIYTVVGNICET-DTFAWDRKLNETREGDVLVFRNAGAYGFEMSSNFNSRLKP 369

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              +          R   + D   N
Sbjct: 370 AEVLFLDGAAHLIRRRDEFEDLLKN 394


>gi|317011876|gb|ADU82484.1| carboxynorspermidine decarboxylase [Helicobacter pylori
           Lithuania75]
          Length = 405

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 138/400 (34%), Positives = 210/400 (52%), Gaps = 38/400 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y+++ ++L  N      +R+ +GVK+LLALK +A W  F  L Q ++G  +S LY
Sbjct: 7   IPTPCYVLESERLEKNAKILEIVRQQSGVKVLLALKGYAFWREFGILRQRLNGCCASGLY 66

Query: 62  EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112
           E  L  E+FGG     E   Y+ A+K+ E+ A+L    +IIFN+  Q     ++  DK +
Sbjct: 67  EAKLAFEEFGGRESQKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNK 126

Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162
           +L        K+GLRINP  S     + +P    SRLG       +   ++    V+GL 
Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKVSRLGITPSGFEKGVKEHGLEGVSGLH 186

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
           FH +CE          L+++EK F  ++  + W++ GGG H T  DY V    Q +++F 
Sbjct: 187 FHTHCEQN-ADALCRTLEHVEKHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQTIRDFK 245

Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
           E+Y   ++ LEPGEAI      L  +V+DI +N + + I+D+S  AH+PD L      +I
Sbjct: 246 ERYHNIEVILEPGEAIGWQCGFLIASVIDIVKNDQEIAILDASFSAHMPDCLEMPYRPSI 305

Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
                             N G ++  + G +CLAGD  G F FE P+K GD+I F+D+  
Sbjct: 306 LKISVENDEELIEIEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGDKIVFQDMLH 365

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y I + N FNG+ +P++A  +  G  K ++ FSY DY N 
Sbjct: 366 YTIVKNNSFNGVPLPSLAKLDQQG-FKILKNFSYEDYKNR 404


>gi|282861110|ref|ZP_06270175.1| diaminopimelate decarboxylase [Streptomyces sp. ACTE]
 gi|282563768|gb|EFB69305.1| diaminopimelate decarboxylase [Streptomyces sp. ACTE]
          Length = 463

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 59/398 (14%), Positives = 115/398 (28%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+                A   +  A K F +  +   L +        S  E
Sbjct: 63  GTPAYILDESDFRARCRAWADAF-GADADVFYAGKAFLSRAVVRWLTEEGLNLDVCSGGE 121

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +          E  A++   K               I+ ++  ++ +    AQ L K+  
Sbjct: 122 LATALDAGMPVERIAFHGNNKTAAEIERAVSAGVGRIVLDSFQEIVRVAHIAQSLGKRQR 181

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
             +R+   V               + G            +  +  +   + G+  H   +
Sbjct: 182 VQIRVTVGVEAHTHEFIATAHEDQKFGIALAGGQAAEAVRRALTLDGLELIGIHSHIGSQ 241

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F      +++ + +       ++  I LGGG+               + +    
Sbjct: 242 IFDMAGFEVSARRVVQLLAEIRDEHGVELPEIDLGGGLGIAYTSEDDPREPHEIAKALGD 301

Query: 225 YSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271
              +             +EPG A+V  T      V  I      +  V VD  +  ++  
Sbjct: 302 IVTRECESAGLATPRISVEPGRAVVGPTAFTLYEVGTIKPLEGLRTYVSVDGGMSDNIRT 361

Query: 272 YLLYQESAT----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326
            L   E +        +  P    V G+ C +GDI  +  F    +  GD I+      Y
Sbjct: 362 ALYDAEYSVSLVSRTSDAEPMLVRVVGKHCESGDIVVKDAFLPADLAPGDLIAVPATGAY 421

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N    P +           +R  +  D   
Sbjct: 422 CRSMASNYNHALRPPVVAVRDGQARVIVRRETEEDLLR 459


>gi|78189076|ref|YP_379414.1| diaminopimelate decarboxylase [Chlorobium chlorochromatii CaD3]
 gi|78171275|gb|ABB28371.1| diaminopimelate decarboxylase [Chlorobium chlorochromatii CaD3]
          Length = 418

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 66/387 (17%), Positives = 117/387 (30%), Gaps = 24/387 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  ++ L+ + +      +        ++K      +  T      G   +S  E
Sbjct: 29  GTPLYVTSERSLIESYEAFERAFQPLHHFTCYSVKANYNLSVIKTFAALGCGCDVNSGGE 88

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIF--NTVSQLNKFKDKA--QKLHKK 117
           +          +   +    K  E  A       ++    +VS+L+     A  Q     
Sbjct: 89  LYRSLQAGVAPDQIIFAGVGKKYEEIAYALESGVLMLKAESVSELHVINRIAAEQGKIAS 148

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCENK 170
           I LRINP+V+              + G    D         +     + GL  H   +  
Sbjct: 149 IALRINPNVTAETHPYITTGDSKEKFGIDEADLADLFALIRQLPHVRLIGLDMHIGSQIF 208

Query: 171 SFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               + A    +   F         +E++ +GGG   T        P++ F ++L    +
Sbjct: 209 DPEYYVAATTKLLALFNLSKSMGFALEYLDIGGGFPVTYTDTKHATPIERFAEKLVPLLQ 268

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSV--EAHVPDYLLYQESAT- 280
              V +  EPG  +V N + L T +L    N                +   L        
Sbjct: 269 PLGVTVIFEPGRYLVANASVLLTRILYRKRNHVGKEFFVVDAGLTELIRPALYQSHHEVQ 328

Query: 281 -IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            +        A V G  C + D F        V  G  ++      Y     + +NG   
Sbjct: 329 AVQRQEASVIADVVGPVCESSDFFARQRELDAVPEGGLLAVMSCGAYASVMGSNYNGRLR 388

Query: 340 PTIAVKNVDGTIKA-IREFSYNDYYNN 365
           P   +   +G +    R  S+     N
Sbjct: 389 PAEVMVRRNGEVVLTRRRESFEQLIQN 415


>gi|65318785|ref|ZP_00391744.1| COG0019: Diaminopimelate decarboxylase [Bacillus anthracis str.
           A2012]
          Length = 438

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 59/400 (14%), Positives = 121/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 30  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F      ++   K  E    A+ +N    + +   +L    D A      
Sbjct: 90  GELYTALQAGFPASRIHFHGNNKXEEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G         +  +  ++    NV G+  H  
Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F   ++ + +            ++ +++GGG      +              
Sbjct: 210 SQIFETAGFVRAIEVLHQFLEEVRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +           +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 270 TSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +    T  + G+ C +GD+         V   D ++      
Sbjct: 330 RPALYNARYEAMLANRGNDENEETVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 390 YGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGN 429


>gi|149911628|ref|ZP_01900239.1| probable diaminopimelate decarboxylase protein [Moritella sp. PE36]
 gi|149805298|gb|EDM65312.1| probable diaminopimelate decarboxylase protein [Moritella sp. PE36]
          Length = 441

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 68/400 (17%), Positives = 135/400 (33%), Gaps = 38/400 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y   K  LLNN+       +   + +  A+K  +   +   + +   G    S+ 
Sbjct: 33  VATPFYCYSKAALLNNIHACKAAFEAENIHIHYAMKANSNLSLLRIVAEQGLGVDIVSIG 92

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116
           E+       F  +   ++   K       AVL+        +  +L      A K  +  
Sbjct: 93  EMHRALSAGFDAQDIVFSGVGKTTAELTAAVLAGVGQFNLESKEELAVLITIANKHQQLL 152

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCEN 169
              +R+NP V+             ++ G          +    S    +NGL  H   + 
Sbjct: 153 SALIRVNPEVTVDTHKNITTGAKGNKFGVNFDAVLPMLETAKHSPFIQINGLAMHIGSQI 212

Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPV--------------- 211
            +   +   +  I+            +  + LGGG     KD+ +               
Sbjct: 213 HTTAPYLDAIAKIQTLISELKTQGYPLTELDLGGGFGVQYKDHQMLTSNTGGSGSDSLAF 272

Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVP 270
            DF Q ++     +  +I +EPG ++V +   + + +  I E+     +V D+++   + 
Sbjct: 273 SDFSQAIRSALPHWQGRISIEPGRSLVADIGVMVSEITYIKESQPTSFVVLDAAMNDLMR 332

Query: 271 DYLLYQESATIYPNTGPYT-----AMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVA 324
              LYQ +  + P   P+T       V G  C + D F +       +  GD + F    
Sbjct: 333 PA-LYQATHALIPVKSPFTSRLTEYDVVGPICESTDTFAKSAQLPNDLAAGDLMCFLYTG 391

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            Y     N +N   +    + + D      +  +  +   
Sbjct: 392 AYCAVMSNSYNSRPIAAEVLVDDDQAYVIRQAITQENLIA 431


>gi|317179313|dbj|BAJ57101.1| diaminopimelate decarboxylase [Helicobacter pylori F30]
          Length = 405

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 69/385 (17%), Positives = 123/385 (31%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP+YL D  K+           K     +  ALK  +   +   L +   G    S+ E
Sbjct: 12  KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLARLESGADCVSIGE 71

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++   K        +  N   +   +  +L   +  AQ L  K  
Sbjct: 72  IYRALKAGIKPYKIVFSGVGKSELEIEQALKLNILFLNVESFMELQTIEKIAQSLGIKAR 131

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           +  RINP++              ++ G   K+ +E       S       + FH   +  
Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSTFLEPISVHFHIGSQLL 191

Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224
                      +  I K        + +  +GGGI  + ++       D+ Q +    + 
Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILNALQG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I  EPG +IV  +  L T VL       K  VIVD+ +   +   L + + A    
Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVI 311

Query: 284 NT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       V G  C + D F +      ++ GD++  E V  Y  +  + +N    
Sbjct: 312 TPCGGCKISPCDVVGPVCESSDTFLKGVHLPELEPGDKLVIEKVGAYGSSMASQYNSRPK 371

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
                          +  +  D + 
Sbjct: 372 LLELALEDHQIRVIRKREALEDLWR 396


>gi|225019949|ref|ZP_03709141.1| hypothetical protein CLOSTMETH_03903 [Clostridium methylpentosum
           DSM 5476]
 gi|224947313|gb|EEG28522.1| hypothetical protein CLOSTMETH_03903 [Clostridium methylpentosum
           DSM 5476]
          Length = 432

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 65/401 (16%), Positives = 118/401 (29%), Gaps = 38/401 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP Y++D+  +  N                 +  A K F    ++  +     G    S
Sbjct: 30  GTPLYVVDEDLVRENCRLFKDSIDRYYGGRGLVCYASKAFCCKEIYRVMEDEQIGVDVVS 89

Query: 60  LYEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKL 114
           + E+       F  E   ++   K          +    II + +++L +    A  Q  
Sbjct: 90  IGEIYTALAAGFPAEKMCFHGNNKTAGELYYALENGVGRIIVDNLNELERLNALAAEQGK 149

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHN 165
              I LR+ P +           +  S+ G         E  K+    E  N+ G   H 
Sbjct: 150 RPNILLRVKPGIDAHTHSFIRTGQIDSKFGFAIETGEALEAAKEASAMEHVNLVGAHCHI 209

Query: 166 NCENKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEF 221
             +      F    + +             ++  ++LGGG      D        R  E 
Sbjct: 210 GSQIFDIDPFVLAAEVMMGYIAAVKKETGVELTDLNLGGGFGIKYTDEDHPVPYDRYMEQ 269

Query: 222 SEKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAH 268
                             I LEPG +I+        TV    E         +D  +  +
Sbjct: 270 VSAKVKEEAARLGLKVPFILLEPGRSIIGPAGITLYTVGARKEIPDIRTYLSIDGGMTDN 329

Query: 269 VPDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
               L   +   +  N           + G+ C +GD+ GE    +    GD ++     
Sbjct: 330 PRYALYQSKYDVVLANKANQPKDDIITLAGKCCESGDLIGEGLKIQRGDAGDIVAVLATG 389

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            YN    + +N +  P +       +   ++  +  D   N
Sbjct: 390 AYNYAMSSNYNRVTKPAVVFVRNGQSRLVVKRETLEDLVRN 430


>gi|256785194|ref|ZP_05523625.1| diaminopimelate decarboxylase [Streptomyces lividans TK24]
 gi|289769087|ref|ZP_06528465.1| diaminopimelate decarboxylase [Streptomyces lividans TK24]
 gi|289699286|gb|EFD66715.1| diaminopimelate decarboxylase [Streptomyces lividans TK24]
          Length = 463

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 63/398 (15%), Positives = 119/398 (29%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP YL+D+               +    +  A K F +  +   L++        S  E
Sbjct: 63  GTPAYLLDEADFRERARAWRTAFGD-DADVFYAGKAFLSRAVVRWLDEEGLNLDVCSGGE 121

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +          E  A++      +    AV +    I+ ++  ++ +    AQ L K+  
Sbjct: 122 LATALSAGMPAERIAFHGNNKSPEEIERAVRAGVGRIVLDSFQEIVRVAHIAQSLGKRQR 181

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
             +RI   V               + G            +  ++ +   V G+  H   +
Sbjct: 182 VQIRITVGVEAHTHEFIATAHEDQKFGIPLAGGQAAEAVRRALKLDGLEVIGIHSHIGSQ 241

Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F          ++        ++  I LGGG+               + +   +
Sbjct: 242 IFDMSGFEVAAHRVVGLLKDIRDEHGVELPEIDLGGGLGIAYTSDDDPREPHEIAKALTE 301

Query: 225 YSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271
              +             +EPG AIV  T      V  +      +  V VD  +  ++  
Sbjct: 302 IVTRECEAARLATPRISVEPGRAIVGPTAFTLYEVGTVKPLEGLRTYVSVDGGMSDNIRT 361

Query: 272 YLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGY 326
            L   E     A+   +  P    V G+ C +GDI  +  F    +  GD I+      Y
Sbjct: 362 ALYDAEYSVALASRTSDAEPMLVRVVGKHCESGDIVVKDAFLPEDLAPGDLIAVPATGAY 421

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N    P +           +R  +  D   
Sbjct: 422 CRSMASNYNHALRPPVVAVRDGAARVVVRRETEEDLLR 459


>gi|188526831|ref|YP_001909518.1| carboxynorspermidine decarboxylase (nspC) [Helicobacter pylori
           Shi470]
 gi|188143071|gb|ACD47488.1| carboxynorspermidine decarboxylase (nspC) [Helicobacter pylori
           Shi470]
          Length = 405

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 135/400 (33%), Positives = 210/400 (52%), Gaps = 38/400 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y+++ ++L  N      + + +G K+LLALK +A W  F  L Q ++G  +S LY
Sbjct: 7   IPTPCYVLESERLEKNAKILEIVHQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66

Query: 62  EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112
           E  L  E+FGG     E   Y+ A+K+ E+ A+L    ++IFN+  Q     ++  DK +
Sbjct: 67  EAKLAFEEFGGRESQKEICVYSPAFKEAEMSAILPLATSVIFNSFYQYATYKDRILDKNK 126

Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162
           +L        K+GLRINP  S    ++ +P    SRLG    +  +   ++    V+GL 
Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPVIYNPCSKVSRLGITPSEFEKGVKEHGLEGVSGLH 186

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
           FH +CE          L+++E+ F  ++  + W++ GGG H T  DY V    Q +K+F 
Sbjct: 187 FHTHCEQN-ADALCRTLEHVERHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQTIKDFK 245

Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
           E+Y   ++ LEPGEAI      L  +V+DI +N + + I+D+S  AH+PD L      +I
Sbjct: 246 ERYRNIEVVLEPGEAIGWQCGFLIASVIDIVKNDQEIAILDASFSAHMPDCLEMPYRPSI 305

Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
                             N G ++  + G +CLAGD  G F FE P+K GD+I F+D+  
Sbjct: 306 LKISVENDEELVEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGDKIVFQDMLH 365

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y I + N FNG+ +P++A  +  G  K ++ FSY DY N 
Sbjct: 366 YTIVKNNSFNGVPLPSLARLDQQG-FKILKNFSYEDYKNR 404


>gi|189485646|ref|YP_001956587.1| diaminopimelate decarboxylase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170287605|dbj|BAG14126.1| diaminopimelate decarboxylase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 410

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 66/385 (17%), Positives = 120/385 (31%), Gaps = 22/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KT  Y+  K K++ N +       +    +  A K  +   +   L +   G  ++S  E
Sbjct: 24  KTSTYVYSKSKIVTNFENYKKALGSREGLICFACKTNSNGTILKLLAKLGAGADTTSGGE 83

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG-- 119
           +       F      Y    K  E           +FN  S              KI   
Sbjct: 84  IYRCLKADFDPSKIVYAGVGKTAEEIEYALKSRIFMFNVESFEELDAIDKIAAKIKIKAK 143

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
              RINP V           +  ++ G   ++ +++           + G+  H   +  
Sbjct: 144 IAFRINPHVDPDTHSYIITGKKGTKFGIPYEEAVKAYLAAKQKKNIEILGIHSHIGSQIL 203

Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK---EFSEK 224
               F      +K I         ++E+++ GGG+    K        ++L         
Sbjct: 204 DIDSFRLAAQKIKKIVNIVEKNGIKLEYVNFGGGLGVEYKKDQKAPSPKQLISELFPVFD 263

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQES---AT 280
            + +   EPG +I+ N   L   V+    +  K+ +I D+ +   +   L          
Sbjct: 264 ENKKFIFEPGRSIIANAGHLLVKVIYRKISGGKSFLITDAGMNDLIRPTLYEAYHEILPV 323

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              N       V G  C +GD  G+      V+ G  +       Y     + +N   + 
Sbjct: 324 KMTNDKKVKTDVVGPICESGDFMGKDRMLPFVEQGGYLLITCAGAYGFAMSSEYNSRPLL 383

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              + N D T+   +   Y D   N
Sbjct: 384 AEVLVNGDKTMLIRKRAKYEDLLLN 408


>gi|196035356|ref|ZP_03102761.1| diaminopimelate decarboxylase [Bacillus cereus W]
 gi|195992033|gb|EDX55996.1| diaminopimelate decarboxylase [Bacillus cereus W]
          Length = 438

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 62/400 (15%), Positives = 127/400 (31%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 30  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F      ++   K  E    A+ +N    + +   +L    D A      
Sbjct: 90  GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFLELEVLHDLAVQHGKF 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G         +  +  ++    NV G+  H  
Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTD---------KDYPVKD 213
            +      F   ++ + +       Q    ++ +++GGG              + Y    
Sbjct: 210 SQIFETAGFVRAIEVLHQFLEEVREQTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269

Query: 214 FCQRLKEFSEKYSV--QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
                ++F+ +     +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 270 TSAVREQFTVRNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +    T  + G+ C +GD+         V   D ++      
Sbjct: 330 RPALYNARYEAMLANRGNDKNEETVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 390 YGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGN 429


>gi|116873394|ref|YP_850175.1| diaminopimelate decarboxylase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|116742272|emb|CAK21396.1| diaminopimelate decarboxylase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 436

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 56/404 (13%), Positives = 127/404 (31%), Gaps = 39/404 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   + +         +  GVK  +  A K F+A  ++  + +        S 
Sbjct: 32  GTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSG 91

Query: 61  YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E   ++   K  +    A+       + +   +++  ++   + ++K
Sbjct: 92  GELYTAIKADFPPERIHFHGNNKSVEEIHMALDYGIGCFVIDNYYEIDLLENILIERNEK 151

Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHN 165
             + +R+ P +           +  S+ G    +             S   ++ GL  H 
Sbjct: 152 ASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHI 211

Query: 166 NCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-DFCQRLKE 220
             +      F      ++  + +  G      + ++LGGG            +  + +++
Sbjct: 212 GSQIFETTGFKLAARRIMDKLVEWHGTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQ 271

Query: 221 FSEKYS----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268
             E+             +I++EPG ++V    T    V    E       +     +  +
Sbjct: 272 IMEEVRDVANSNAIAIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDN 331

Query: 269 VPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
           +   L       +           T  + G+ C +GD+            G+ ++     
Sbjct: 332 IRPALYDAHYDAVLAANPEKVAEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTG 391

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367
            Y     + +N I  P +           +   +Y +   N LS
Sbjct: 392 AYGYAMASNYNRIPRPPVVFVENGVDKLIVARETYENLVQNDLS 435


>gi|258507107|ref|YP_003169858.1| diaminopimelate decarboxylase [Lactobacillus rhamnosus GG]
 gi|257147034|emb|CAR86007.1| Diaminopimelate decarboxylase [Lactobacillus rhamnosus GG]
 gi|259648477|dbj|BAI40639.1| diaminopimelate decarboxylase [Lactobacillus rhamnosus GG]
          Length = 447

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 66/399 (16%), Positives = 130/399 (32%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           +TP Y+ D   + + +     + + AGV   +  A K FA   M++            S 
Sbjct: 26  QTPLYVYDVGAIRHQIRAFKQVFETAGVAYAVSYASKAFATIAMYEVAKAEAIHVDVVSG 85

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKD--KAQKLH 115
            E+       F  E  +++   K       A+ +   TII +   +L+   +  KA    
Sbjct: 86  GELYTAQAADFPMEKVSFHGNNKSKAELEQALDAGVGTIIVDNFHELDLLDELLKAAVGK 145

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           + + +R+ P +S          +  S+ G         E  K  +  +  N+ G+  H  
Sbjct: 146 QNVLIRVAPGISAHTHAYDQTGQTDSKFGFDLESGQADEAAKRILADDHLNLLGIHAHIG 205

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQI----EWISLGGGIHFTDKDYPVKDFCQRL---- 218
            +      F A+ + +     H+  Q     + +++GGG              +      
Sbjct: 206 SQIFEVAGFEAVTQKLLAVLDHWHQQFSFTPKVLNVGGGFGIAYTKQDDPLPPEAFVQAI 265

Query: 219 -------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
                            +++EPG +IV        TV    +    +  V VD  +  ++
Sbjct: 266 VTTLKTQSHGFNWPLPAVWIEPGRSIVGPAGYSLYTVGSRKDVPGLRPYVAVDGGMGDNI 325

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +     A            + G+ C +GDI  +       + GD ++  D   
Sbjct: 326 RPALYQAQYTAVVADHPTAQPTEHVHLVGKYCESGDILIDDAPLPATQPGDVVAVFDTGA 385

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  + +N    P +           +   +Y D   
Sbjct: 386 YGYSMASNYNRNPRPAVVFVEDGQAQLVVTRETYADLIQ 424


>gi|21227987|ref|NP_633909.1| diaminopimelate decarboxylase [Methanosarcina mazei Go1]
 gi|20906414|gb|AAM31581.1| Diaminopimelate decarboxylase [Methanosarcina mazei Go1]
          Length = 420

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 63/393 (16%), Positives = 117/393 (29%), Gaps = 31/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+++ D++ +  N        K+  G K   A+K      +   L +   G   SSL 
Sbjct: 21  PTPFHIYDEKAIRENARRMKSAFKDIPGFKEFFAVKALPNPFILKILKEEGFGADCSSLP 80

Query: 62  EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E++L       G+   ++       E          I  + +S +   +  A        
Sbjct: 81  ELILAEKAGMTGDDIMFSSNDTPAEEFIKAKELGGFINLDDISHIPYLEKSAGLPEIVC- 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFHNNCENK----- 170
                     +          ++ G   +   E       K V     H    +      
Sbjct: 140 -FRYNPGPLKEGNAIIGKPEEAKYGFTREQMFEGYRILRDKGVKRFGMHTMVASNELNSD 198

Query: 171 -SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
                   + + I +       Q E+++LGGGI    +        + + +  ++     
Sbjct: 199 YFVETARILFELIVEISKELGIQFEFVNLGGGIGIPYRPEQEPVSLEAVAKGVKEAYDAT 258

Query: 230 Y-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                       LE G  I      L + V  +    K+ V +DS +   +   +     
Sbjct: 259 ITANGLAPLKIYLECGRVITGPYGYLISQVRHLKSTYKDYVGLDSCMANLMRPGMYGAYH 318

Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        V+IGD ++  D   +       +
Sbjct: 319 HITVFGKEKKAPAHKYDVTGSLCENNDKFAIDRMLPEVEIGDILAIHDAGAHGHAMGFNY 378

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       +   DG++  IR   +  DY+  L
Sbjct: 379 NGKLRSAELLLREDGSVVQIRRAETIEDYFATL 411


>gi|258545703|ref|ZP_05705937.1| diaminopimelate decarboxylase [Cardiobacterium hominis ATCC 15826]
 gi|258519073|gb|EEV87932.1| diaminopimelate decarboxylase [Cardiobacterium hominis ATCC 15826]
          Length = 425

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 62/384 (16%), Positives = 127/384 (33%), Gaps = 26/384 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+ D   +       L       ++L  A+K  +   +   L     G    S  E
Sbjct: 38  GSPLYVYDGDAIRGQFRAYLAHGLPRELQLHFAMKANSNLAILRLLAAEGAGFDIVSGGE 97

Query: 63  VMLGH-EKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +              ++   K       A+ +        + ++L    + A        
Sbjct: 98  LARVLQAGGDAAQVVFSGVAKSDAEMQAALAAGIGCFNVESAAELQCLAEVASAMGKVAP 157

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNCENK 170
           + LR+NP V              ++ G   +D               V G+  H   + +
Sbjct: 158 VALRVNPDVDAKTHPYISTGMRENKFGVALEDAPALYRWAAVQPSLRVVGVGCHIGSQIR 217

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVK----DFCQRLKEFSE 223
           S   F     ++             +  + LGGG+     D  +     D  + L E   
Sbjct: 218 SLAPFLQAADSVLTLADALVAEGIALGHVDLGGGLGIETADDFMALTPADLSRALLERVG 277

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
           +  ++++L+PG ++V N   L + V+    ++ ++ +++D+++  +V    LYQ   ++ 
Sbjct: 278 ERPLRLHLQPGRSLVGNAGLLLSQVVFRKSQSGRDFLMLDAAMNDYVRPA-LYQVRPSLV 336

Query: 283 PNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
             + PY       V G  C + D F    F    + GD +       Y  +  + +N   
Sbjct: 337 NVSRPYDGVSRMDVVGPVCESSDTFARD-FPICGERGDVVVIPGTGAYGFSMASNYNSRP 395

Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362
            P   +          R  ++ D 
Sbjct: 396 RPAEVLIEGGQARLIRRRETFADL 419


>gi|153951269|ref|YP_001398641.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. doylei
           269.97]
 gi|152938715|gb|ABS43456.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 402

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 57/383 (14%), Positives = 124/383 (32%), Gaps = 22/383 (5%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+Y+ +   +           K    ++  A+K  +   +   L     G    S+ EV
Sbjct: 12  TPFYIYNFDFIKERFLNLKEAFKARKSQIFYAVKANSNLSLLQMLANLDSGFDCVSIGEV 71

Query: 64  MLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
                 +       ++   K  +    A+  +   I   + +++   +  A++L+ K  +
Sbjct: 72  KRALKAEAKAYKIIFSGVGKTKEELRQALEYDILYINLESEAEMMLLESVAKELNLKARI 131

Query: 121 --RINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCE--- 168
             R+NP+V              ++ G +             S      G+ FH   +   
Sbjct: 132 SIRVNPNVDAKTHPYISTGLNENKFGVEIDIAKKMYLYAKNSSFLEPVGVHFHIGSQLLD 191

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK 224
                  + ++  + +E       +++  +GGG+    +       +  + Q +      
Sbjct: 192 ISPIYEAAGIVAKLVRELKALQIDLKFFDIGGGLGVAYEKDECEPDLYHYAQGILAQLHG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I +EPG  +V  +     +VL       K  V+VD ++   +   L       I P
Sbjct: 252 LDLTIGMEPGRYLVAKSGEFVCSVLYEKQNKTKRFVVVDGAMNDLIRPSLYEAYHEIILP 311

Query: 284 NTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                     V G  C +GD F +       + GD +  ++   Y  +  + +N  N   
Sbjct: 312 YNQAQESLCDVVGGICESGDFFAKARSLPSTQSGDIMVIKNTGAYGFSMSSNYNTRNKVC 371

Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364
                        +  ++ D   
Sbjct: 372 ELALEEGQVRLIRQRENFEDQIA 394


>gi|325285021|ref|YP_004260811.1| diaminopimelate decarboxylase [Cellulophaga lytica DSM 7489]
 gi|324320475|gb|ADY27940.1| diaminopimelate decarboxylase [Cellulophaga lytica DSM 7489]
          Length = 416

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 69/384 (17%), Positives = 118/384 (30%), Gaps = 27/384 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           P Y+ D +K+++         K    +KL  A K  +   +   +N    G  + S+ EV
Sbjct: 16  PVYVYDSEKIVSQYQRLTNAFKGVKKLKLNYAAKALSNISILRLMNSLGSGLDTVSIQEV 75

Query: 64  MLGH-EKFGGETHAYNVAYKDCEIDAVLS-NCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            LG    F  E+  Y       E     +     I  + +S L +F  K    +  + +R
Sbjct: 76  ELGLLAGFKPESIIYTPNGVSLEEIEKAAALGVRINIDNLSVLEQFGSK--HPNIPVCIR 133

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFLCF 175
           INP V              S+ G                  N+NG+  H   +      F
Sbjct: 134 INPHVMAGGNSNISVGHIDSKFGISIHQIPHLLRIVDLTKMNINGIHMHTGSDILDIDVF 193

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY----- 230
               + I  E       +++I  G G     K   ++   + L +               
Sbjct: 194 LYASE-ILFETAKNFKNLDFIDFGSGFKVPYKTGDIETNVEELGQKLSAKFNDFCKEYGK 252

Query: 231 -----LEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLY--QESATIY 282
                 EPG+ +V+ +      V  + +        +DS     +   L     E   I 
Sbjct: 253 ELTLAFEPGKFLVSESGFFLAKVNVVKQTTSTVFASIDSGFNHLIRPMLYGSSHEILNIS 312

Query: 283 PNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
              G      V G  C   D F        +  GD + F +   Y     + +N    P 
Sbjct: 313 NPEGRERYYSVVGYICET-DTFASNRRINEISEGDILCFRNAGAYCFTMASNYNSRFRPP 371

Query: 342 IAVKNVDGTIKAIREFSYNDYYNN 365
             + +    I      +++D   N
Sbjct: 372 EVLWHNGEAILIRERETFDDLIKN 395


>gi|297379512|gb|ADI34399.1| diaminopimelate decarboxylase [Helicobacter pylori v225d]
          Length = 405

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 69/385 (17%), Positives = 122/385 (31%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP+YL D  K+           K     +  ALK  +   +   L     G    S+ E
Sbjct: 12  KTPFYLYDFDKIKQAFLNYKKAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGE 71

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++   K        +  N   +   +  +L   +  AQ L  K  
Sbjct: 72  IYRALKAGIKPYRIVFSGVGKSEFEIEQALKLNILFLNVESFMELQTIEKIAQSLGIKAR 131

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           +  RINP++              ++ G   K+ +E       S       + FH   +  
Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPISVHFHIGSQLL 191

Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224
                      +  I K        + +  +GGGI  + ++       D+ Q +    + 
Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILNALQG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I  EPG +IV  +  L T VL       K  VIVD+ +   +   L + + A    
Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVI 311

Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       V G  C + D F +      ++ GD++  E V  Y  +  + +N    
Sbjct: 312 TPSKGRKISPCDVVGPVCESSDTFLKGVHLPELEPGDKLVIEKVGAYGSSMASQYNSRPK 371

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
                          +  +  D + 
Sbjct: 372 LLELALEDRQIRVIRKREALEDLWR 396


>gi|194290982|ref|YP_002006889.1| diaminopimelate decarboxylase protein [Cupriavidus taiwanensis LMG
           19424]
 gi|193224817|emb|CAQ70828.1| DIAMINOPIMELATE DECARBOXYLASE PROTEIN [Cupriavidus taiwanensis LMG
           19424]
          Length = 419

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 56/387 (14%), Positives = 114/387 (29%), Gaps = 26/387 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L                ++  A+K  +   +     +   G    S  E
Sbjct: 27  GTPTYVYSRAALTAAYQAYAAACAGRKAQVQYAMKANSNLAVLQVFARLGAGFDIVSGGE 86

Query: 63  VMLGH-EKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++   K       A+  +       ++ +L++  + A ++ K+  
Sbjct: 87  LKRVLAAGGDPRKVVFSGVGKSAAEMELALAQDVRCFNVESIPELDRLNEVAGRVGKRAR 146

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
             LRINP V              ++ G   +D + +           V G+  H   +  
Sbjct: 147 VSLRINPDVDARTHPYISTGLKGNKFGIAFEDVLPTYRAAAALPHLAVTGIDCHIGSQIT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               +   L    ++ +        +E I +GGG+  T  D    D         E+   
Sbjct: 207 EVEPYLEALDKVLDVVEALEREGISLEHIDVGGGLGITYTDETPPDITGFATTLLERVAA 266

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES-- 278
                 ++  EPG ++V N   L T V  +         + D+++       +       
Sbjct: 267 RGHGHREVLFEPGRSLVGNAGVLLTQVEFLKPGAAKNFCIVDAAMNDLARPAMYEAYHRI 326

Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                 +    T  + G  C +GD  G       V+ GD ++      Y     + +N  
Sbjct: 327 EPVALRDGAAVTYDIVGPVCESGDWLGRDRALA-VQPGDLLAVMSAGAYGFTMSSNYNTR 385

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
                 + +              D + 
Sbjct: 386 PRAAEVMVDGARVHLVRERELVEDLFR 412


>gi|206977595|ref|ZP_03238488.1| diaminopimelate decarboxylase [Bacillus cereus H3081.97]
 gi|222095152|ref|YP_002529212.1| diaminopimelate decarboxylase [Bacillus cereus Q1]
 gi|206744168|gb|EDZ55582.1| diaminopimelate decarboxylase [Bacillus cereus H3081.97]
 gi|221239210|gb|ACM11920.1| diaminopimelate decarboxylase [Bacillus cereus Q1]
          Length = 438

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 59/400 (14%), Positives = 121/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 30  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F      ++   K  E    A+ +N    + +   +L    D A      
Sbjct: 90  GELYTALQAGFPASRIHFHGNNKTDEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G         +  +  ++    NV G+  H  
Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F   ++ + +            ++ +++GGG      +              
Sbjct: 210 SQIFETAGFVRAIEVLHQFLEELRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +      E    +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 270 TSAVREQFTVCEYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +       + G+ C +GD+         V   D ++      
Sbjct: 330 RPALYNARYEAMLANRGNDENEEVVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 390 YGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGN 429


>gi|23099288|ref|NP_692754.1| diaminopimelate decarboxylase [Oceanobacillus iheyensis HTE831]
 gi|22777517|dbj|BAC13789.1| diaminopimelate decarboxylase (dap decarboxylase) [Oceanobacillus
           iheyensis HTE831]
          Length = 435

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 61/403 (15%), Positives = 123/403 (30%), Gaps = 38/403 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   + NN    +      GVK  +  A K F++  M     Q        S 
Sbjct: 31  GTPLYVYDVALIRNNARAFVQAFTEKGVKGKVAYASKAFSSIAMLQVAKQEGLCLDVISE 90

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+      +F  E    +   K  E   +        I+ +    ++  +   ++  K+
Sbjct: 91  GELYTALQAEFPTERIHMHGNNKSIEEIRMAVDYEIGCIVIDNFHDIDLLEKVLEEKQKQ 150

Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
           +   +R+ P V              S+ G            K     +     GL  H  
Sbjct: 151 MDVLIRVTPGVESKTHQYIMTGNEDSKFGFDLQNGQAEQAFKRLHNHQQIRFQGLHCHIG 210

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEW----ISLGGGIHFTDKDYPVK--------DF 214
            +      F      +  E   +  + ++    ++LGGG                     
Sbjct: 211 SQIFETSGFQVATDLLFSELEKWNNKYDYQPNVLNLGGGFGIRYTKDDQPLPLDKYIKSM 270

Query: 215 CQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
              ++   ++ S+++   ++EPG +IV N      T+    +             +  ++
Sbjct: 271 ADAVQTHVKQLSMEMPEIWIEPGRSIVGNAGITLYTIGSNKQIPGIREYYSIDGGMTDNI 330

Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +  N           + G+ C +GD+         +  GD ++      
Sbjct: 331 RPALYNAAYEAVIANHPKNPIEKEVSIAGKCCESGDMLIWDLPVPEINSGDVLAVFSTGA 390

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367
           Y+ +  + +N +    +           +R  +Y D   N LS
Sbjct: 391 YSYSMASHYNRLPNAAVVFVENGRDQLVVRRETYQDVVRNDLS 433


>gi|21223714|ref|NP_629493.1| diaminopimelate decarboxylase [Streptomyces coelicolor A3(2)]
 gi|13276798|emb|CAC33917.1| diaminopimelate decarboxylase [Streptomyces coelicolor A3(2)]
          Length = 463

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 63/398 (15%), Positives = 119/398 (29%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP YL+D+               +    +  A K F +  +   L++        S  E
Sbjct: 63  GTPAYLLDEADFRERARAWRTAFGD-DADVFYAGKAFLSRAVVRWLDEEGLNLDVCSGGE 121

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +          E  A++      +    AV +    I+ ++  ++ +    AQ L K+  
Sbjct: 122 LATALSAGMPAERIAFHGNNKSPEEIERAVRAGVGRIVLDSFQEIVRVAHIAQSLGKRQR 181

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
             +RI   V               + G            +  ++ +   V G+  H   +
Sbjct: 182 VQIRITVGVEAHTHEFIATAHEDQKFGIPLAGGQAAEAVRRALKLDGLEVIGIHSHIGSQ 241

Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F          ++        ++  I LGGG+               + +   +
Sbjct: 242 IFDMSGFEVAAHRVVGLLKDIRDEHGVELPEIDLGGGLGIAYTSDDDPREPHEIAKALTE 301

Query: 225 YSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271
              +             +EPG AIV  T      V  +      +  V VD  +  ++  
Sbjct: 302 IVTRECEAARLATPRISVEPGRAIVGPTAFTLYEVGTVKPLEGLRTYVSVDGGMSDNIRT 361

Query: 272 YLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326
            L   E     A+   +  P    V G+ C +GDI  +  F    +  GD I+      Y
Sbjct: 362 ALYDAEYSVALASRTSDAEPMLVRVVGKHCESGDIVVKDAFLPGDLAPGDLIAVPATGAY 421

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N    P +           +R  +  D   
Sbjct: 422 CRSMASNYNHALRPPVVAVRDGAARVVVRRETEEDLLR 459


>gi|217031766|ref|ZP_03437270.1| hypothetical protein HPB128_155g79 [Helicobacter pylori B128]
 gi|298737096|ref|YP_003729626.1| carboxynorspermidine decarboxylase NspC [Helicobacter pylori B8]
 gi|216946613|gb|EEC25213.1| hypothetical protein HPB128_155g79 [Helicobacter pylori B128]
 gi|298356290|emb|CBI67162.1| carboxynorspermidine decarboxylase (NspC) [Helicobacter pylori B8]
          Length = 405

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 138/400 (34%), Positives = 210/400 (52%), Gaps = 38/400 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y+++ ++L  N      +R+ +G K+LLALK +A W  F  L Q ++G  +S LY
Sbjct: 7   IPTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66

Query: 62  EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112
           E  L  E+FGG     E   Y+ A+K+ E+ A+L    +IIFN+  Q     ++  DK +
Sbjct: 67  EAKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNK 126

Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162
           +L        K+GLRINP  S     + +P    SRLG       +   ++    V+GL 
Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSGFEKGVKEHGLEGVSGLH 186

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
           FH +CE          L+++EK F  ++  + W++ GGG H T  DY V    Q +K+F 
Sbjct: 187 FHTHCEQN-ADALCRTLEHVEKHFRPYLENMAWVNFGGGHHITKSDYDVNLLIQTIKDFK 245

Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
           E+Y   ++ LEPGEAI      L  +V+DI +N + + I+D+S  AH+PD L      +I
Sbjct: 246 ERYHNVEVILEPGEAIGWQCGFLIASVIDIVQNDQEIAILDASFSAHMPDCLEMPYRPSI 305

Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
           +                 N G ++  + G +CLAGD  G F FE P+K GD+I F+D+  
Sbjct: 306 FKISVENDEELIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGDKIVFQDMLH 365

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y I + N FNG+ +P++A  +  G  K ++ FSY DY N 
Sbjct: 366 YTIVKNNSFNGVPLPSLARLDQQG-FKILKNFSYEDYKNR 404


>gi|315453325|ref|YP_004073595.1| diaminopimelate decarboxylase [Helicobacter felis ATCC 49179]
 gi|315132377|emb|CBY83005.1| diaminopimelate decarboxylase [Helicobacter felis ATCC 49179]
          Length = 640

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 67/380 (17%), Positives = 132/380 (34%), Gaps = 21/380 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP+YL D  ++             A   +  ALK  +   +   L +   G    S+YE
Sbjct: 14  PTPFYLYDFDQIKEAFLEFKNAFSGAKSLICYALKANSNLSLLAHLARLGAGGDCVSIYE 73

Query: 63  VMLG-HEKFGGETHAYNV-AYKDCEIDAVLSNCDTI-IFNTVSQLNKFKDKAQKLHKKIG 119
           V              ++     + EI   L +        +  +L   +  A  L+    
Sbjct: 74  VRRALLAGIPSYKIIFSGVGKLESEIQEALESKILFLNVESFEELQLIERIATDLNTPAR 133

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           +  R+NP+++             ++ G + K+ ++  +           GL  H   +  
Sbjct: 134 ISVRVNPNINAQTHPYISTGLWENKFGVEEKEAVQMFMFAKQSPFLEPVGLHCHIGSQLI 193

Query: 171 SFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVK--DFCQRLKEFSEKY 225
                    + +    +       +++++ +GGG+   +    +   D+ + LK  ++K 
Sbjct: 194 ELEPIKEAGEKMHALARFLMASGVELKFLDMGGGLGVDEGKGAISIADYTKPLKSIAQKL 253

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
            + +  EPG  IV ++  L + V  +     KN +IVD+ +   +   L     +    N
Sbjct: 254 DLTLICEPGRRIVADSGVLVSRVQYVKPGARKNFIIVDAGMNDLMRPALYGARHSVEVLN 313

Query: 285 TGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
           T   T     + G  C + D F +    K V  GD + F+ V  Y  +  + +N      
Sbjct: 314 TQEGTEAIYDIVGPVCESADCFLKEVPLKGVTRGDLLLFKQVGAYGASMASHYNSRPKIL 373

Query: 342 IAVKNVDGTIKAIREFSYND 361
                 D         S+ D
Sbjct: 374 ELGVEQDRVRILRDRESFFD 393


>gi|229084515|ref|ZP_04216790.1| Diaminopimelate decarboxylase [Bacillus cereus Rock3-44]
 gi|228698805|gb|EEL51515.1| Diaminopimelate decarboxylase [Bacillus cereus Rock3-44]
          Length = 449

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 63/400 (15%), Positives = 123/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D+  +           + +G   ++  A K F    M     +        S 
Sbjct: 41  GTPLYVYDETAIREKCRAFHRAFQESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 100

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F      ++   K  E    A+ +N    + +   ++    D A     +
Sbjct: 101 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFFEMEILHDLAEQYGKN 160

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G               +E    NV G+  H  
Sbjct: 161 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGISTGQAMQAIQIALEKSNYNVLGIHSHIG 220

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWI----SLGGGIHFTDKDYPV--------KDF 214
            +      F   ++ +         Q  ++    ++GGG      +              
Sbjct: 221 SQIFETAGFVRAIEVLHHFLEEIREQTSYVATVLNVGGGFGIRYTEADTPLTLETYVHAV 280

Query: 215 CQRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            + ++E   K +     I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 281 TEVVREQFTKNNYPLPEIWIEPGRSIVGDAGTTIYTVGAVKDIPSIRKYVSVDGGMTDNL 340

Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +  N G         + G+ C +GD+         V  GD ++      
Sbjct: 341 RPALYGARYEAMLANRGRENAKEVVSIAGKCCESGDMLIWDIELPQVISGDLLAISCTGA 400

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 401 YGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGN 440


>gi|327398433|ref|YP_004339302.1| diaminopimelate decarboxylase [Hippea maritima DSM 10411]
 gi|327181062|gb|AEA33243.1| diaminopimelate decarboxylase [Hippea maritima DSM 10411]
          Length = 412

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 64/387 (16%), Positives = 125/387 (32%), Gaps = 25/387 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P Y+  K       +          V +  A+K  +   +  T      G    S  
Sbjct: 23  VGSPVYVYSKGHFKAQFEKFNKAFSREHV-IAFAIKSNSNLAVIKTFASLGAGADIVSKG 81

Query: 62  EV-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118
           E+              ++   K  +        D   I   +  +L      A+KL+KK 
Sbjct: 82  ELFRAIKAGVDTSKIVFSGVAKRDDEIEYALENDIMMINVESEDELYNVNRVAEKLNKKA 141

Query: 119 GL--RINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCE- 168
            +  R+NP V              ++ G   ++         E +  +V G+ FH   + 
Sbjct: 142 RIAFRVNPDVDPKTHPYISTGLKKNKFGVPYEEAYDLYLKAKELKNIDVYGIQFHIGSQL 201

Query: 169 --NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221
                    S  + ++ +       +   + +GGG+         K+  V  + ++++E 
Sbjct: 202 LDTTPIYDASVRVADLMRRLTDKGVEFRVVDVGGGVGIVYDEKTDKEPDVNLYARQIEEA 261

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES-- 278
              + V++ LEPG  +V N   L + V+   +   KN +I+D+ +   +   L       
Sbjct: 262 FRDFDVKLVLEPGRFLVGNGGILVSKVIYHKTNGQKNFLIIDAGMNDLLRPSLYKAYHKI 321

Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                  +      + G  C  GD F   +  + V  G+ I       Y     + +N  
Sbjct: 322 APMKKTGSKAIKCDIVGPICETGDFFARDYEIEDVPNGNFIVVFSAGAYGFTMASNYNSR 381

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
             P   + + D         S  D   
Sbjct: 382 PRPAEVLVSGDSYRVVRERESLEDLIK 408


>gi|227877371|ref|ZP_03995442.1| diaminopimelate decarboxylase [Lactobacillus crispatus JV-V01]
 gi|256848696|ref|ZP_05554130.1| diaminopimelate decarboxylase [Lactobacillus crispatus MV-1A-US]
 gi|262045896|ref|ZP_06018860.1| diaminopimelate decarboxylase [Lactobacillus crispatus MV-3A-US]
 gi|293381825|ref|ZP_06627797.1| diaminopimelate decarboxylase [Lactobacillus crispatus 214-1]
 gi|312978255|ref|ZP_07789998.1| diaminopimelate decarboxylase [Lactobacillus crispatus CTV-05]
 gi|227863039|gb|EEJ70487.1| diaminopimelate decarboxylase [Lactobacillus crispatus JV-V01]
 gi|256714235|gb|EEU29222.1| diaminopimelate decarboxylase [Lactobacillus crispatus MV-1A-US]
 gi|260573855|gb|EEX30411.1| diaminopimelate decarboxylase [Lactobacillus crispatus MV-3A-US]
 gi|290921611|gb|EFD98641.1| diaminopimelate decarboxylase [Lactobacillus crispatus 214-1]
 gi|310894774|gb|EFQ43845.1| diaminopimelate decarboxylase [Lactobacillus crispatus CTV-05]
          Length = 436

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 61/398 (15%), Positives = 121/398 (30%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D  ++   +     + +       +  A K FAA  M+  + +    T   S 
Sbjct: 31  GTPLVVYDVDQIRRQIRAFKKVFEEENMAYAVSYASKAFAAIAMYQVIAEEGAYTDVVSA 90

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F  E  +++   K      +   ++   II +   ++             
Sbjct: 91  GELFTAIKANFPMERVSFHGNNKSLTELEMAVKNHVGKIIIDNFHEIQLLAQVLKKYDAT 150

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNN 166
             + LRI P +S          +  S+ G   +           + +    + G+  H  
Sbjct: 151 ISVMLRIAPGISAHTHEYDQTGQIDSKFGFDLESGQAEKALKQVLANPRMKMLGIHAHIG 210

Query: 167 CENKSFLCFSAMLKNIE----KEFGHFITQIEWISLGGGIHFTDKDYPVK--------DF 214
            +  +   F    + +          +    + I++GGG                     
Sbjct: 211 SQIFALNGFEMGAQKLMVVAQDWREKYGYLAQVINVGGGFGIKYTQEDHPLRPEEFVKTI 270

Query: 215 CQRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            + +K  +EK +     I +EPG +IV        TV    +       +     +  ++
Sbjct: 271 VKVIKTEAEKMNYPLPEIDIEPGRSIVGPAGYNLYTVGSRKDIPGYRSYITVDGGMGDNI 330

Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +  T+              + G+ C +GDI  E      VK GD ++  D   
Sbjct: 331 RPALYQAKYETVLATDPQAPLTEHVRIAGKYCESGDILAEDQALPQVKAGDLLAMLDTGA 390

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
           Y  +  + +N    P +           I+  S  D  
Sbjct: 391 YGYSMASNYNRNPRPAVVFAENGKAKLVIKRESLEDLV 428


>gi|261837475|gb|ACX97241.1| carboxynorspermidine decarboxylase [Helicobacter pylori 51]
          Length = 405

 Score =  218 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 138/400 (34%), Positives = 210/400 (52%), Gaps = 38/400 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y+++ ++L  N      +R+ +G K+LLALK +A W  F+ L Q ++G  +S LY
Sbjct: 7   IPTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFEVLRQKLNGCCASGLY 66

Query: 62  EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112
           E  L  E+FGG     E   Y+ A+K+ E+ A+L    +IIFN+  Q     ++  DK +
Sbjct: 67  EAKLAFEEFGGRESQKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNK 126

Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162
           +L        K+GLRINP  S     + +P    SRLG       +   ++    V+GL 
Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKVSRLGIVPSGFEKGVKEHGLEGVSGLH 186

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
           FH +CE          L+++EK F  ++  + W++ GGG H T  DY V    Q +K+F 
Sbjct: 187 FHTHCEQN-ADALCRTLEHVEKHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQTIKDFK 245

Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
           E+Y   ++ LEPGEAI      L  +V+DI +N + + I+D+S  AH+PD L      +I
Sbjct: 246 ERYHNIEVVLEPGEAIGWQCGFLIASVIDIVKNDQEIAILDASFSAHMPDCLEMPYRPSI 305

Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
                             N G ++  + G +CLAGD  G F FE P+K GD+I F+D+  
Sbjct: 306 LKISVENDEELIEVEKGENQGVFSYFLGGPTCLAGDFMGSFSFEAPLKRGDKIVFQDMLH 365

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y I + N FNG+ +P++A  +  G  K ++ FSY DY N 
Sbjct: 366 YTIVKNNSFNGVPLPSLARLDQQG-FKILKNFSYEDYKNR 404


>gi|229010823|ref|ZP_04168020.1| Diaminopimelate decarboxylase [Bacillus mycoides DSM 2048]
 gi|228750497|gb|EEM00326.1| Diaminopimelate decarboxylase [Bacillus mycoides DSM 2048]
          Length = 449

 Score =  218 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 60/400 (15%), Positives = 124/400 (31%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 41  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 100

Query: 61  YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+       F      ++     ++  I A+ +N    + +   +L    D A +    
Sbjct: 101 GELYTALQAGFPASRIHFHGNNKTEEEMIMALQANIGCFVVDNFLELEILHDLAMQHGKF 160

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G         +  +  ++    NV G+  H  
Sbjct: 161 VNILIRVTPGVEAHTHEYITTGQEDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 220

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVK---------- 212
            +      F   ++ + +       +    ++ +++GGG      D              
Sbjct: 221 SQIFETAGFVRAIEVLRQFLEEVRERTHYVMKVLNVGGGFGIRYTDSDTPLTLETYVHAV 280

Query: 213 -DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +      E    +I++EPG +IV +  T   TV  + E       V     +  ++
Sbjct: 281 TSTIREQFTLCEYPLPEIWIEPGRSIVGDAGTTLYTVGAVKEIPGIRKYVSVDGGMTDNL 340

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +       + G+ C +GD+         V   D ++      
Sbjct: 341 RPALYGARYEAMLANRGNDENEELVSIAGKCCESGDMLIWDINLPQVASSDLLAISCTGA 400

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 401 YGYSMANNYNRIRRPAVVFAKGGTSQIVVERETYENIIGN 440


>gi|256420790|ref|YP_003121443.1| diaminopimelate decarboxylase [Chitinophaga pinensis DSM 2588]
 gi|256035698|gb|ACU59242.1| diaminopimelate decarboxylase [Chitinophaga pinensis DSM 2588]
          Length = 435

 Score =  218 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 60/405 (14%), Positives = 129/405 (31%), Gaps = 40/405 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+YL     L  +        +     +  ++K      + + L     G    S  
Sbjct: 26  LPTPFYLYSANTLRLHYKKIYGAFEKLDPVICFSVKSSNNVHLLNELAALGAGMDIVSGG 85

Query: 62  EVMLGHEKFG--GETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+ +  +      +     V   D E  DA+LS    I   +  +L + ++ A  L +++
Sbjct: 86  ELFVVKQSNADLSKVVFAGVGKSDEEITDAILSEVGYINIESEQELARVQELAGDLKREV 145

Query: 119 GLRINPSVS---YSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE 168
            + I                     ++ G          ++  +     + GL  H    
Sbjct: 146 SVLIRIQPDITDEKTNEKTRTGYKGAKFGIDYANVEALIEENADHPFVKIKGLHCHIGSP 205

Query: 169 NKSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKDF-------CQRL 218
             S+  +   ++ +    +        ++ +++GGG      D     +        + L
Sbjct: 206 ISSYTFYEECIRKMVGLTESLKQKNIILKVLNIGGGFPANYMDNDNFSWESFAGPIIELL 265

Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQE 277
           + + +K   +I LEPG +I  NT  L T VL + ++    + + D+ +   +   +    
Sbjct: 266 EPYVKKEGFKIILEPGRSISANTAVLVTRVLYVKKSGDKNIAILDAGMTELIRPAMYNAF 325

Query: 278 SATI----------------YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321
                                   G     V G  C + D   +     P++ GD ++  
Sbjct: 326 HFIWPVKPEAQHLLTNRNYPVEQEGLTNYDVVGPICESSDYLAKERALPPLQQGDYVAVF 385

Query: 322 DVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366
            V  Y +   + +N    P   + + D         +  D    +
Sbjct: 386 TVGAYGMVMASNYNLHVRPAEVMIDKDKIYIIRERETQQDLVRKM 430


>gi|91214570|ref|ZP_01251543.1| diaminopimelate decarboxylase [Psychroflexus torquis ATCC 700755]
 gi|91186997|gb|EAS73367.1| diaminopimelate decarboxylase [Psychroflexus torquis ATCC 700755]
          Length = 401

 Score =  218 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 61/386 (15%), Positives = 119/386 (30%), Gaps = 27/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV-KLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            +P Y+ D + ++N         K     +L  A+K  +   +    NQ   G  + S+ 
Sbjct: 14  GSPVYVYDSETIINQYKRLTEAFKKVKHLRLHYAVKALSNLSILRLFNQLGSGLDTVSIQ 73

Query: 62  EVMLG-HEKFGGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           EV LG       +   +                   I  + +  L +F  K       + 
Sbjct: 74  EVKLGIAAGVNPKKIIFTPNGVSIGELEEAVGLGVQINIDNLLILEQFGTK--HPKVPVC 131

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKSFL 173
           +RINP V              S+ G            +E+    +NG+  H   +     
Sbjct: 132 IRINPHVMAGGNTNISVGHIDSKFGISIHQMPHVLRIVENTGMTINGIHMHTGSDILDIG 191

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY--- 230
            F    + +      F   +E++  G G      +  ++   + L     K   +     
Sbjct: 192 VFLYAAEILFDVAAKF-QNLEFLDFGSGFKVPYHEGDIETDVEELGTKLTKRFNEFCKSY 250

Query: 231 -------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
                   EPG+ +V+        V  + +    +     S   H+   + Y  +  I  
Sbjct: 251 GKDLTLAFEPGKFLVSEAGFFLAKVNVVKQTTSTVFAQIDSGFNHLVRPMFYGSNHDIIN 310

Query: 284 NTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            + P        V G  C   D F        +  GD ++F++   Y  +  + +N    
Sbjct: 311 ISHPKRNKRFYSVVGYICET-DTFANNKMITEISEGDILAFKNAGAYCYSMASNYNSRFR 369

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365
           P   + +        +  +++D   N
Sbjct: 370 PPEVLWHKGKAHLIRQRETFDDIVRN 395


>gi|15644653|ref|NP_206822.1| carboxynorspermidine decarboxylase (nspC) [Helicobacter pylori
           26695]
 gi|2313093|gb|AAD07088.1| carboxynorspermidine decarboxylase (nspC) [Helicobacter pylori
           26695]
          Length = 405

 Score =  218 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 138/400 (34%), Positives = 210/400 (52%), Gaps = 38/400 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y+++ ++L  N      +R+ +G K+LLALK +A W  F  L Q ++G  +S LY
Sbjct: 7   IPTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66

Query: 62  EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112
           E  L  E+FGG     E   Y+ A+K+ E+ A+L    +IIFN+  Q     ++  DK +
Sbjct: 67  EAKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNK 126

Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162
           +L        K+GLRINP  S     + +P    SRLG       +   ++    V+GL 
Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKVSRLGITPSGFEKGVKEHGLEGVSGLH 186

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
           FH +CE          L+++EK F  ++  + W++ GGG H T  DY V    Q +K+F 
Sbjct: 187 FHTHCEQN-ADALCRTLEHVEKHFRPYLENMAWVNFGGGHHITKSDYDVNLLIQTIKDFK 245

Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
           E+Y   ++ LEPGEAI      L  +V+DI +N + + I+D+S  AH+PD L      +I
Sbjct: 246 ERYHNIEVILEPGEAIGWQCGFLIASVIDIVQNDQEIAILDASFSAHMPDCLEMPYRPSI 305

Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
           +                 N G ++  + G +CLAGD  G F FE P+K GD+I F+D+  
Sbjct: 306 FKVSVENDEELIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGDKIVFQDMLH 365

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y I + N FNG+ +P++A  +  G  K ++ FSY DY N 
Sbjct: 366 YTIVKNNSFNGVPLPSLARLDQQG-FKILKNFSYEDYKNR 404


>gi|319951908|ref|YP_004163175.1| diaminopimelate decarboxylase [Cellulophaga algicola DSM 14237]
 gi|319420568|gb|ADV47677.1| diaminopimelate decarboxylase [Cellulophaga algicola DSM 14237]
          Length = 412

 Score =  218 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 66/384 (17%), Positives = 118/384 (30%), Gaps = 27/384 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           P Y+ D +K++   +           +KL  A K  +   +   +N    G  + S+ EV
Sbjct: 16  PVYVYDSEKIIAQFNRLTNAFSGVKKLKLNYAAKALSNITILKLMNSLGSGLDTVSIQEV 75

Query: 64  MLGH-EKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            LG    F  E   +        EI+        I  + +S L +F  K       + +R
Sbjct: 76  QLGLLAGFKPENIIFTPNGVSLEEIEEAAKLGVRINIDNLSILEQFGSK--FPKVPVCIR 133

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESE------IKNVNGLMFHNNCENKSFLCF 175
           INP V              S+ G                  ++NG+  H   +      F
Sbjct: 134 INPHVMAGGNSNISVGHIDSKFGISIHQIPHLLRIVELTQMHINGIHMHTGSDILDIDVF 193

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY----- 230
               + I  E      ++++I  G G     K+  ++   + L     +           
Sbjct: 194 LYASE-ILFETAKNFKELDFIDFGSGFKVPYKEGDIETNIEELGSKLTEKFNAFCKEYGK 252

Query: 231 -----LEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLL--YQESATIY 282
                 EPG+ +V+        V  + +        +DS     +   L   Y +   I 
Sbjct: 253 ELTLAFEPGKFLVSEAGQFLAKVNVVKQTTSTVFASIDSGFNHLIRPMLYGSYHQIENIS 312

Query: 283 PNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
              G      V G  C   D F        +  GD ++F++   Y     + +N    P 
Sbjct: 313 NPEGRERYYSVVGYICET-DTFASNRRITEISEGDILTFKNAGAYCFTMASNYNSRFRPA 371

Query: 342 IAVKNVDGTIKAIREFSYNDYYNN 365
             + +    +      +  D   N
Sbjct: 372 EVLWHKGEAVLIRERETLEDIIKN 395


>gi|226509744|ref|NP_001141045.1| hypothetical protein LOC100273126 [Zea mays]
 gi|194702382|gb|ACF85275.1| unknown [Zea mays]
          Length = 488

 Score =  218 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 63/386 (16%), Positives = 114/386 (29%), Gaps = 27/386 (6%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           +P+YL  K ++L N        +     +  A+K      +   L +   G    S  E+
Sbjct: 94  SPFYLYSKPQILRNFAAYRDALQGLRSIIGYAVKANNNLPVLRVLRELGCGAVLVSGNEL 153

Query: 64  MLGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIG 119
            L     F      +N        +     +   +  ++   L       +A      + 
Sbjct: 154 RLALQAGFDPARCIFNGNGKTLEHLKLAAESGVFVNVDSEFDLENIVRAARATGKKVPVL 213

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCENKS 171
           LRINP V              S+ G + +                 + G+  H       
Sbjct: 214 LRINPDVDPQVHPYVATGNKTSKFGIRNEKLQWFLDSIKSYPNEIKLVGVHCHLGSTITK 273

Query: 172 FLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEFSE 223
              F      +            ++E++++GGG+               D    ++E   
Sbjct: 274 VDIFRDAAVLMLNYVDEIRAQGFKLEYLNIGGGLGIDYHHTDAVLPTPMDLINTVRELVL 333

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-HVPDYLLYQESA--- 279
              + + +EPG +++ NT      V  +  N     IV     A  +   L         
Sbjct: 334 SQDLTLIIEPGRSLIANTCCFVNRVTGVKSNGTKNFIVVDGSMAELIRPSLYGAYQHIEL 393

Query: 280 --TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                P     T  + G  C + D  G+         G  +   D   Y ++  + +N  
Sbjct: 394 VSPPTPGAEAATFDIVGPVCESADFLGKDRELPTPDEGAGLVVHDAGAYCMSMASTYNLK 453

Query: 338 NMPTIAVKNVDGTIKAIRE-FSYNDY 362
             P       DG+I  IR     +DY
Sbjct: 454 LRPPEYWVEADGSIVKIRHGEKLDDY 479


>gi|78044590|ref|YP_360770.1| diaminopimelate decarboxylase [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77996705|gb|ABB15604.1| diaminopimelate decarboxylase [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 517

 Score =  218 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 61/399 (15%), Positives = 125/399 (31%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++D+++   N          K+ G   + A K      +   + +   G    S 
Sbjct: 102 GTPLYILDEEEFRKNCREYYQNFTQKHPGSLAIYAGKTLLTTAICRLVEEEGLGLDVVSG 161

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F      ++   K  E     V +     + + + +L    D A   K+ 
Sbjct: 162 GELYTAIKADFPLHKVYFHGNNKSPEEIRLGVEAGVGRFVVDNLYELYLLNDIAKSYKVR 221

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNN 166
           + I LR++P +           +  S+ G   +           +E +   + G   H  
Sbjct: 222 QPILLRVSPGIEAHTHEYIKTGQIDSKFGFPIETGQAMDAAQRALELDGIELKGFHCHIG 281

Query: 167 CENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---- 218
            +      F+     M   + + F       E + LGGG+     +         +    
Sbjct: 282 SQIFELESFAHTVEVMTAFMAEVFKATGFMTEELDLGGGLGIYYAEGDNPPTVAAMAETI 341

Query: 219 -------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
                   +       ++ +EPG +I     +   T+  I +       V     +  + 
Sbjct: 342 FTTLESQCQKLGLKVPKVIVEPGRSIAGPAGSTLYTIGAIKDIPGIRTYVAVDGGMGDNP 401

Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   I  N           + G+ C +GD+         +K GD +   +   
Sbjct: 402 RPALYQAKYEAIVANKANDQPVKLVSIAGKCCESGDMLIWDIELAEIKPGDLLLVSNTGA 461

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           YN +    +N +  P + +         +R  +Y+D  +
Sbjct: 462 YNYSMAMNYNRLPRPAMVLVGGGKAELIVRRETYDDLLS 500


>gi|302537812|ref|ZP_07290154.1| diaminopimelate decarboxylase [Streptomyces sp. C]
 gi|302446707|gb|EFL18523.1| diaminopimelate decarboxylase [Streptomyces sp. C]
          Length = 445

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 69/397 (17%), Positives = 124/397 (31%), Gaps = 36/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+ ++     T       A   +  A K F +  M   +++   G    S  E
Sbjct: 47  GTPVYVLDEGEVRGRCRTYKEAFPAAD--VYYAAKAFLSRAMVRWVHEEGLGLDVCSAGE 104

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQK-LHKKI 118
           + L     F  E    +   K       A+      I+ ++ S++ +          +K+
Sbjct: 105 LELAVTAGFPPERIVLHGNAKSPRDLGSALRLGVGRIVIDSPSEIARIAAAVGPGDRQKV 164

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCEN 169
            +R+ P VS              + G    D          +      + GL  H   + 
Sbjct: 165 MVRVVPGVSAGGHDKIRTGTDGQKFGLSAADGSAARAVARVLAQPQLELTGLHCHIGSQI 224

Query: 170 KSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK- 224
                +      M+  +        T +  + LGGG     +          L       
Sbjct: 225 TEAEPYLTALRRMVALMAGVRDAHGTVLPELDLGGGHGIAYRPGEPALDVAVLARGLRDG 284

Query: 225 ----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYL 273
                        ++ +EPG A+V         VL +        V VD  +  +    L
Sbjct: 285 LAEGCAAAGFPVPRLAVEPGRAVVGPAGVAVYRVLAVKHTGDTLFVAVDGGMSDNPRPAL 344

Query: 274 LYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNI 328
                A       P  GP TA V GR C AGD+          V+ GD ++      Y++
Sbjct: 345 YGVRYAPRLIGRAPTAGPRTATVVGRHCEAGDVLAAGVELPGDVRPGDLVAVPVAGAYHL 404

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           +  + +N +  P +   +       +R  ++ D    
Sbjct: 405 SMASGYNMVGRPPVVAVHEGTARLLVRRETFEDLRRR 441


>gi|317013444|gb|ADU80880.1| carboxynorspermidine decarboxylase [Helicobacter pylori
           Gambia94/24]
          Length = 405

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 136/400 (34%), Positives = 207/400 (51%), Gaps = 38/400 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y ++ ++L  N      +R+ +G K+LLALK +A W  F  L Q ++G  +S LY
Sbjct: 7   IPTPCYALESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66

Query: 62  EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112
           E  L  E+FGG     E   Y+ A+K+ E+  +L    +IIFN+  Q     ++  DK +
Sbjct: 67  EAKLAFEEFGGRESHKEICVYSPAFKEAEMSTILPLATSIIFNSFHQYATYKDRILDKNK 126

Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162
           +L        K+GLRINP  S     + +P    SRLG       +   ++    V+GL 
Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKTSRLGITPSGFEKGVKEHGLEGVSGLH 186

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
           FH +CE          L+++E+ F  ++  + W++ GGG H T  DY V    Q +K+F 
Sbjct: 187 FHTHCEQN-ADALCRTLEHVERHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQTIKDFK 245

Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
           E+Y   ++ LEPGEAI      L  +V+DI +N + + I+D+S  AH+PD L      +I
Sbjct: 246 ERYHNIEVILEPGEAIGWQCGFLIASVIDIVQNDQEIAILDASFSAHMPDCLEMPYRPSI 305

Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
                             N G ++  + G +CLAGD  G F FE P+K GD+I F+D+  
Sbjct: 306 LKVSVENDEELVEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGDKIVFQDMLH 365

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y I + N FNG+ +P++A  +  G  K ++ FSY DY N 
Sbjct: 366 YTIVKNNSFNGVPLPSLAKIDSQG-FKILKSFSYEDYKNR 404


>gi|326777094|ref|ZP_08236359.1| diaminopimelate decarboxylase [Streptomyces cf. griseus XylebKG-1]
 gi|326657427|gb|EGE42273.1| diaminopimelate decarboxylase [Streptomyces cf. griseus XylebKG-1]
          Length = 444

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 66/397 (16%), Positives = 121/397 (30%), Gaps = 36/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+ ++ +   T          ++L A K F +  M   +++   G    S+ E
Sbjct: 46  GTPVYVLDEDEVRSRCRTYRAAF--PDARVLYAAKAFLSRAMARWIDEEGLGLDVCSVGE 103

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL-HKKI 118
           + L H   F  E    +   K               I+ ++ S++ +          +K+
Sbjct: 104 LELAHAAGFPPERMVLHGNAKTPHDIETALRLGVGRIVVDSPSEIARIAALTGPGGRQKV 163

Query: 119 GLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCEN 169
            +R+ P VS              + G               +      + GL  H   + 
Sbjct: 164 MVRVVPGVSAGGHEKIRTGTDGQKFGLSLTDGSAQHAIARVLGQPQLELTGLHCHIGSQI 223

Query: 170 KSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
                +      ++  + +   +       + LGGG     +          L       
Sbjct: 224 TDAKPYAVAVRRLVGLMARIKDNHGVTFPELDLGGGHGVAHRPGDPALDLTALARRLGAE 283

Query: 226 -----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYL 273
                        +  +EPG AIV         VL +     N  V VD  +  +    L
Sbjct: 284 LATSCAAAGLPVPRTVIEPGRAIVAPAGVALYRVLAVKHTGPNLFVAVDGGMSDNPRPAL 343

Query: 274 LYQESATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNI 328
                A          GP  A V GR C AGD+          ++ GD ++      Y +
Sbjct: 344 YGARYAPRLIGRSTTAGPVAATVVGRHCEAGDVLANDVLLPGDIRSGDLLAVPVAGAYQV 403

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           +  + +N +  P +   +       IR  +  D    
Sbjct: 404 SMASSYNLVGRPPVVAVHDGTARLLIRRETQEDLRRR 440


>gi|182436473|ref|YP_001824192.1| putative diaminopimelate decarboxylase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|178464989|dbj|BAG19509.1| putative diaminopimelate decarboxylase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 458

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 66/397 (16%), Positives = 121/397 (30%), Gaps = 36/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+ ++ +   T          ++L A K F +  M   +++   G    S+ E
Sbjct: 60  GTPVYVLDEDEVRSRCRTYRAAF--PDARVLYAAKAFLSRAMARWIDEEGLGLDVCSVGE 117

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL-HKKI 118
           + L H   F  E    +   K               I+ ++ S++ +          +K+
Sbjct: 118 LELAHAAGFPPERMVLHGNAKTPHDIETALRLGVGRIVVDSPSEIARIAALTGPGGRQKV 177

Query: 119 GLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCEN 169
            +R+ P VS              + G               +      + GL  H   + 
Sbjct: 178 MVRVVPGVSAGGHEKIRTGTDGQKFGLSLTDGSAQHAIARVLGQPQLELTGLHCHIGSQI 237

Query: 170 KSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
                +      ++  + +   +       + LGGG     +          L       
Sbjct: 238 TDAKPYAVAVRRLVGLMARIKDNHGVTFPELDLGGGHGVAHRPGDPALDLTALARRLGAE 297

Query: 226 -----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYL 273
                        +  +EPG AIV         VL +     N  V VD  +  +    L
Sbjct: 298 LATSCAAAGLPVPRTVIEPGRAIVAPAGVALYRVLAVKHTGPNLFVAVDGGMSDNPRPAL 357

Query: 274 LYQESATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNI 328
                A          GP  A V GR C AGD+          ++ GD ++      Y +
Sbjct: 358 YGARYAPRLIGRSTTAGPVAATVVGRHCEAGDVLANDVLLPGDIRSGDLLAVPVAGAYQV 417

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           +  + +N +  P +   +       IR  +  D    
Sbjct: 418 SMASSYNLVGRPPVVAVHDGTARLLIRRETQEDLRRR 454


>gi|150392021|ref|YP_001322070.1| diaminopimelate decarboxylase [Alkaliphilus metalliredigens QYMF]
 gi|149951883|gb|ABR50411.1| diaminopimelate decarboxylase [Alkaliphilus metalliredigens QYMF]
          Length = 433

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 66/399 (16%), Positives = 120/399 (30%), Gaps = 36/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++ K+K+             K    K   A K F    M   +     G    S 
Sbjct: 26  GTPLYVLSKEKIQERCKEIRETFLQKYENTKAAYASKAFLTMAMCRIIESEGLGLDVVSG 85

Query: 61  YEVMLG-HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F  E   ++      +    AV      II + + +L   +  A  Q   
Sbjct: 86  GEIYTAVQAGFPMEKTMFHGNNKSFEELYLAVEHGVGRIIVDNLLELEMLQQIAKEQGKK 145

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
             +  R+ P V           +  S+ G            K  +ES    + G  FH  
Sbjct: 146 VDVLFRVTPGVEGKTHAYIVTGQKDSKFGIPLQPEIIESAVKQTMESPYIKLKGFHFHIG 205

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWI----SLGGGIHFTDKDYPVKD-------FC 215
            +      ++   + +     H    +E+I    + GGG      D   +          
Sbjct: 206 SQLFENDSYTDATQVLVNLMKHLKDHLEFITEELNTGGGFGIKYVDEAPRPLGYFTDAIM 265

Query: 216 QRLKEFSEK---YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSV--EAHVP 270
           + +K+  EK       I +EPG  IV         +  + E                +  
Sbjct: 266 ETIKDACEKVGLEVPTIIIEPGRWIVGEAGITLYRIGTVKEIPDVRTYASVDGGLPDNPR 325

Query: 271 DYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
             L   +     A            + G+ C +GDI         ++ GD ++      Y
Sbjct: 326 PALYNAKYDAVVANKIDEEKDQIVTIAGKCCESGDILIWDLQAPQIQTGDLLAVLSTGAY 385

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           N +  + +N +  P + + +       ++  +Y D  + 
Sbjct: 386 NFSMASNYNRLPRPAVVLVDQGKAEIMVQRETYGDLLSR 424


>gi|154148229|ref|YP_001405731.1| carboxynorspermidine decarboxylase [Campylobacter hominis ATCC
           BAA-381]
 gi|153804238|gb|ABS51245.1| carboxynorspermidine decarboxylase [Campylobacter hominis ATCC
           BAA-381]
          Length = 408

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 137/403 (33%), Positives = 208/403 (51%), Gaps = 40/403 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           IKTP Y+ +K  LL NL+    + + +G K+L ALK FA       + +++ G T S L+
Sbjct: 6   IKTPAYVCEKDALLRNLELLKSVGEESGAKVLCALKGFAFSLAMPYIGEFLRGATCSGLF 65

Query: 62  EVMLGHEKFGG-----------------ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL 104
           E    ++   G                 E H Y+ A+KD ++D +L   + ++FN+ SQ 
Sbjct: 66  EAKYANDLIKGGLSENMQKMGNKNYKNIEIHTYSPAFKDDDMDEILQISNHVVFNSFSQW 125

Query: 105 NKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNV 158
            KF+ KA     K GLR+NP  S+S     +P   FSRLG   ++   +          +
Sbjct: 126 KKFRQKAIISGVKCGLRVNPQTSFSPVENYNPCGKFSRLGITIENFKNALNVENSLLDGI 185

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL 218
           +GL  H  CE +S      +++  E +FG FI +++WI+ GGG H T K Y V+   + L
Sbjct: 186 SGLHLHALCE-ESSEHLQTVVREFEMQFGEFIPRMKWINFGGGHHITKKGYNVELLVKIL 244

Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
           K+FS+K+ V++Y+EPGEA+      L  +VLDI EN   + I+D+S EAH+PD +L    
Sbjct: 245 KDFSQKWGVEVYIEPGEAVGWQCGYLVASVLDIVENGVKIAILDTSAEAHMPDTVLMPYR 304

Query: 279 ATIYP----------NTGPYTAMVCGRSCLAGDIFGE------FHFEKPVKIGDRISFED 322
             +            N   ++    G +CLAGDI G       + FEKP+KIGDRI FED
Sbjct: 305 PAVRDEISSCDKKLKNGEIFSYRFGGNTCLAGDIIGLESGEPLYCFEKPLKIGDRIIFED 364

Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              Y I +   FNGI +P + + + +G I   + F Y++Y   
Sbjct: 365 QIHYTIVKNTTFNGIKLPDLYLIDKNGEILDSKIFGYDEYKRR 407


>gi|229166360|ref|ZP_04294117.1| Diaminopimelate decarboxylase [Bacillus cereus AH621]
 gi|228617102|gb|EEK74170.1| Diaminopimelate decarboxylase [Bacillus cereus AH621]
          Length = 438

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 60/400 (15%), Positives = 124/400 (31%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 30  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+       F      ++     ++  I A+ +N    + +   +L    D A +    
Sbjct: 90  GELYTALQAGFPASRIHFHGNNKTEEEMIMALQANIGCFVVDNFLELEILHDLAMQHGKF 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G         +  +  ++    NV G+  H  
Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQEDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVK---------- 212
            +      F   ++ + +       +    ++ +++GGG      D              
Sbjct: 210 SQIFETAGFVRAIEVLRQFLEEVRERTHYVMKVLNVGGGFGIRYTDSDTPLTLETYVHAV 269

Query: 213 -DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +      E    +I++EPG +IV +  T   TV  + E       V     +  ++
Sbjct: 270 TSTIREQFTLCEYPLPEIWIEPGRSIVGDAGTTLYTVGAVKEIPGIRKYVSVDGGMTDNL 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +       + G+ C +GD+         V   D ++      
Sbjct: 330 RPALYGARYEAMLANRGNDKNEELVSIAGKCCESGDMLIWDINLPQVASSDLLAISCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQIVVERETYENIIGN 429


>gi|328885052|emb|CCA58291.1| Diaminopimelate decarboxylase [Streptomyces venezuelae ATCC 10712]
          Length = 463

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 60/398 (15%), Positives = 118/398 (29%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y +D+                    +  A K F +  +   L +        S  E
Sbjct: 63  GTPAYFLDETDFRARCRAWAEAFGK-DADVFYAGKAFLSRAVVRWLKEEGLNLDVCSGGE 121

Query: 63  VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +          E  A++   K       AV +    I+ ++  ++ +    AQ L K+  
Sbjct: 122 LATALSAGMPAERIAFHGNNKSEAEIRRAVEAGVGRIVLDSFQEIVRVAHIAQSLGKRQR 181

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
             +R+   V               + G            +  ++ +   + G+  H   +
Sbjct: 182 VQIRVTVGVEAHTHEFIATAHEDQKFGIALAGGQAAEAVRRALKLDGLELIGIHSHIGSQ 241

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F      +++ + +       ++  I LGGG+               + +   +
Sbjct: 242 IFDMAGFEVSARRVVQLLAEVRDEHGVELPEIDLGGGLGIAYTSEDDPREPHEIAKALGE 301

Query: 225 YSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271
              +             +EPG AIV  T      V  +      +  V VD  +  ++  
Sbjct: 302 IVTRECESAGLATPRISVEPGRAIVGPTAFTLYEVGTVKPLEGLRTYVSVDGGMSDNIRT 361

Query: 272 YLLYQESAT----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326
            L   E +        +  P  + V G+ C +GDI     F    +  GD I+      Y
Sbjct: 362 ALYDAEYSVSLVSRTSDAAPMLSRVVGKHCESGDIVVRDAFLPSDLAPGDLIAVPATGAY 421

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N    P +           +R  +  D   
Sbjct: 422 CRSMASNYNHAQRPPVVAVRDGEARVIVRRETEEDLLR 459


>gi|195624020|gb|ACG33840.1| diaminopimelate decarboxylase [Zea mays]
 gi|224030925|gb|ACN34538.1| unknown [Zea mays]
          Length = 486

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 64/386 (16%), Positives = 117/386 (30%), Gaps = 27/386 (6%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           +P+YL  K ++L N        +     +  A+K      +   L +   G    S  E+
Sbjct: 92  SPFYLYSKLQILRNFAAYRDALQGLRSIVGYAVKANNNLPVLRVLRELGCGAVLVSGNEL 151

Query: 64  MLGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIG 119
            L     F      +N       ++     +   +  ++   L       +A      + 
Sbjct: 152 RLALQAGFDPARCIFNGNGKTLEDLKLAAESGVFVNVDSEFDLENIVRAARATGKKVPVL 211

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLMFHNNCENKS 171
           LRINP V              S+ G + +            S    + G+  H       
Sbjct: 212 LRINPDVDPQVHPYVATGNKTSKFGIRNEKLQWFLNSIKSYSNEIKLVGVHCHLGSTITK 271

Query: 172 FLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEFSE 223
              F      +            ++E++++GGG+               D    ++E   
Sbjct: 272 VDIFRDAAVLMVNYVDEIRAQGFKLEYLNIGGGLGIDYHHTDAVLPTPMDLINTVRELVL 331

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-HVPDYLLYQESATIY 282
              + + +EPG +++ NT      V  +  N     IV     A  +   L         
Sbjct: 332 SQDLTLIIEPGRSLIANTCCFVNRVTGVKSNGTKNFIVVDGSMAELIRPSLYGAYQHIEL 391

Query: 283 PNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
            +         T  + G  C + D  G+         G  +   D   Y ++  + +N  
Sbjct: 392 VSPPTPGAEVATFDIVGPVCESADFLGKDRELPTPDEGAGLVVHDAGAYCMSMASTYNLK 451

Query: 338 NMPTIAVKNVDGTIKAIR-EFSYNDY 362
             P       DG+I  IR E   +DY
Sbjct: 452 LRPPEYWVEEDGSIVKIRHEEKLDDY 477


>gi|49477226|ref|YP_035636.1| diaminopimelate decarboxylase [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|49328782|gb|AAT59428.1| diaminopimelate decarboxylase [Bacillus thuringiensis serovar
           konkukian str. 97-27]
          Length = 438

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 58/400 (14%), Positives = 120/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 30  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F      ++   K  E    A+ +N    + +   +L    D A      
Sbjct: 90  GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G         +  +  ++    NV G+  H  
Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F   ++ + +            ++ +++GGG      +              
Sbjct: 210 SQIFETAGFVRAIEVLHQFLEELRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +           +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 270 TSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +       + G+ C +GD+         V   D ++      
Sbjct: 330 RPALYNARYEAMLANRGNDENEEVVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 390 YGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGN 429


>gi|83590211|ref|YP_430220.1| diaminopimelate decarboxylase [Moorella thermoacetica ATCC 39073]
 gi|83573125|gb|ABC19677.1| diaminopimelate decarboxylase [Moorella thermoacetica ATCC 39073]
          Length = 434

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 61/400 (15%), Positives = 114/400 (28%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D+  + +N           +   +++ A K F    M   +     G    S 
Sbjct: 24  GTPLYIFDEDCIRDNCRQFYRAFNAGSGQAEVIYAGKAFLTTAMCRIIASEGLGLDVVSG 83

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK- 116
            E+       F  E   ++   K        + +     + +  ++L      A +  + 
Sbjct: 84  GELYTALAAGFPVERIYFHGNNKSYAELCQGLEAGIGRFMVDNFTELELLSRLAVERGQV 143

Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNN 166
            K+ LR+ P +           +  S+ G            +   E       GL  H  
Sbjct: 144 AKVILRVTPGIEAHTHDYIRTGQVDSKFGFTLPGGQALAAARRAGELPGIEFMGLHCHIG 203

Query: 167 CENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK--- 219
            +      ++     M++               + LGGG              +      
Sbjct: 204 SQIFELEPYNEAVAVMMELAAAVKEATGLVTAELDLGGGFGIYYTTGDEPRPIRAYAETI 263

Query: 220 --------EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
                           ++ +EPG +IV    +   TV  I E       V     +  ++
Sbjct: 264 LARVREEARRLNLPQPRVLVEPGRSIVGPAGSTAYTVGSIKEIPGVRKYVAVDGGMADNI 323

Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   I  N           V G+ C +GD+        PV+ GD +       
Sbjct: 324 RPALYGAKYEAILANKAGMPATEKVTVTGKCCESGDMLIWEAELPPVERGDILLMPCTGA 383

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y     + +N +  P   +         I+   Y+D   N
Sbjct: 384 YGYTMASNYNRLGRPAAVLVRDGVADLIIKREDYSDLIRN 423


>gi|229138209|ref|ZP_04266805.1| Diaminopimelate decarboxylase [Bacillus cereus BDRD-ST26]
 gi|228645241|gb|EEL01477.1| Diaminopimelate decarboxylase [Bacillus cereus BDRD-ST26]
          Length = 449

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 58/400 (14%), Positives = 120/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 41  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 100

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F      ++   K  E    A+ +N    + +   +L    D A      
Sbjct: 101 GELYTALQAGFPASRIHFHGNNKTDEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 160

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G         +  +  ++    NV G+  H  
Sbjct: 161 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 220

Query: 167 CENKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F   ++ + +            ++ +++GGG      +              
Sbjct: 221 SQIFETAGFVRAIEVLRQFLEAVRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 280

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +           +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 281 TSAVREQFTLCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 340

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +       + G+ C +GD+         V   D ++      
Sbjct: 341 RPALYNARYEAMLANRGNDENEEVVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 400

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 401 YGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGN 440


>gi|195619652|gb|ACG31656.1| diaminopimelate decarboxylase [Zea mays]
          Length = 488

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 62/386 (16%), Positives = 115/386 (29%), Gaps = 27/386 (6%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           +P+YL  K ++L N        +     +  A+K      +   L +   G    S  E+
Sbjct: 94  SPFYLYSKPQILRNFAAYRDALQGLRSIIGYAVKANNNLPVLRVLRELGCGAVLVSGNEL 153

Query: 64  MLGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIG 119
            L     F      +N       ++     +   +  ++   L       +A      + 
Sbjct: 154 RLALQAGFDPARCIFNGNGKTLEDLKLAAESGVFVNVDSEFDLENIVRAARATGKKVPVL 213

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCENKS 171
           LRINP V              S+ G + +                 + G+  H       
Sbjct: 214 LRINPDVDPQVHPYVATGNKTSKFGIRNEKLQWFLDSIKSYPNEIKLVGVHCHLGSTITK 273

Query: 172 FLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEFSE 223
              F      +            ++E++++GGG+               D    ++E   
Sbjct: 274 VDIFRDAAVLMVNYVDEIRAQGFKLEYLNIGGGLGIDYHHTDAVLPTPMDLINTVRELVL 333

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-HVPDYLLYQESATIY 282
              + + +EPG +++ NT      V  +  N     IV     A  +   L         
Sbjct: 334 SQDLTLIIEPGRSLIANTCCFVNRVTGVKSNGTKNFIVVDGSMAELIRPSLYGAYQHIEL 393

Query: 283 PNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
            +         T  + G  C + D  G+         G  +   D   Y ++  + +N  
Sbjct: 394 VSPPTPGAEVATFDIVGPVCESADFLGKDRELPTPDEGAGLVVHDAGAYCMSMASTYNLK 453

Query: 338 NMPTIAVKNVDGTIKAIRE-FSYNDY 362
             P       DG+I  IR     +DY
Sbjct: 454 LRPPEYWVEADGSIVKIRHGEKLDDY 479


>gi|229195717|ref|ZP_04322479.1| Diaminopimelate decarboxylase [Bacillus cereus m1293]
 gi|228587723|gb|EEK45779.1| Diaminopimelate decarboxylase [Bacillus cereus m1293]
          Length = 449

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 58/400 (14%), Positives = 120/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 41  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 100

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F      ++   K  E    A+ +N    + +   +L    D A      
Sbjct: 101 GELYTALQAGFPASRIHFHGNNKTDEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 160

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G         +  +  ++    NV G+  H  
Sbjct: 161 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 220

Query: 167 CENKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F   ++ + +            ++ +++GGG      +              
Sbjct: 221 SQIFETAGFVRAIEVLRQFLEAVRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 280

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +           +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 281 TSAVREQFTLCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 340

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +       + G+ C +GD+         V   D ++      
Sbjct: 341 RPALYNARYEAMLANRGNDENEEVVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 400

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 401 YGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGN 440


>gi|317122541|ref|YP_004102544.1| diaminopimelate decarboxylase [Thermaerobacter marianensis DSM
           12885]
 gi|315592521|gb|ADU51817.1| diaminopimelate decarboxylase [Thermaerobacter marianensis DSM
           12885]
          Length = 445

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 60/397 (15%), Positives = 118/397 (29%), Gaps = 36/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+  +            +AGV +  A K      +   ++Q      + S  E
Sbjct: 38  GTPLYVLDEVAIRQRCRAYRDAMGDAGV-IAYAAKALCTTAILRIMDQEGLWMDAVSGGE 96

Query: 63  VMLGHE-KFG-GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKF--KDKAQKLHKK 117
           +       F  G    +     D E+  A+ +    ++ +   +L +     +A      
Sbjct: 97  LHTALAAGFPAGRVLLHGNNKSDEELRLAIETGVGRVVIDNFYELERLAAMARAAGRKVP 156

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK--DKIESEIKNVN-------GLMFHNNCE 168
           + LR+ P V           +  S+ G        + +  + ++       G   H   +
Sbjct: 157 VLLRVAPGVEAHTHEFIRTGQQESKFGFDLATGQALAALERVLDEPALDWYGFHCHIGSQ 216

Query: 169 NKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
             +   +      M+    +        +  + LGGG+                      
Sbjct: 217 ILAVEPWEQAARIMMDLAAEAHRRTGRVMRELDLGGGLGIRYLPQDEPPSIAETVGRIRA 276

Query: 225 YS-----------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271
                         ++ LEPG +IV        TV  +         V VD  +  +   
Sbjct: 277 AVAAAAEERGLPVPRLILEPGRSIVGEAGVTLYTVGAVKRVPGLAPYVAVDGGMADNPRY 336

Query: 272 YLLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
            L       +  N           + GR C +GDI         V+ GD ++      YN
Sbjct: 337 ALYRALYTAVLANRPLDEPAERVCLVGRYCESGDILIPQIDLPRVEPGDVVAVFSTGAYN 396

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            +  + +N    P + +         +   +Y+D   
Sbjct: 397 YSMSSQYNRFPRPAMVLVRDGEAEVIVERETYDDLLR 433


>gi|321471945|gb|EFX82917.1| hypothetical protein DAPPUDRAFT_316211 [Daphnia pulex]
          Length = 489

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 63/400 (15%), Positives = 131/400 (32%), Gaps = 37/400 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGV----KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           TP Y+  + +L  N+ +     ++AG+     +  A+K      + + + +   G  + S
Sbjct: 87  TPLYIYSQAQLHRNIQSYKDAIQSAGMSGRMHIFYAVKANPNLHLMELVRKQNCGAVTVS 146

Query: 60  LYEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            YE+       F  E    N    +  EI   L N   +  ++          A++L K 
Sbjct: 147 GYELKAALNTGFVPEMILLNGNGKQMWEIRLALKNGCMLNVDSYFDAENIISVARQLQKT 206

Query: 118 IGLRINPSV-----SYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHN 165
             + I  +      S             S+ G       +            V GL  H 
Sbjct: 207 ARVLIRVNPGLEQSSTPVHSYLSTALKNSKFGIPLHQFDQVLELLRAEHFIQVVGLHCHV 266

Query: 166 NCENKSF----LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFC 215
               +           +L   +K        ++++ +GGG+          +  P+    
Sbjct: 267 GSTIRDAFIYSDVTRILLDIRQKLITQGYAHLKYLDIGGGLGIDYYHGTNQEQSPLSSTG 326

Query: 216 QRLKEF--SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK---NLVIVDSSVEAHVP 270
           + ++         V++ +EPG ++V NT  L T VL   ++     N V+VD+++   + 
Sbjct: 327 ELIQAIASLLPPDVEVIIEPGRSLVANTGILVTKVLGSKKSPDGGKNFVVVDAAMNDLIR 386

Query: 271 DYLLYQESATIYPNTG---PYTAMVCGRSCLAGDIFGEFHFE-KPVKIGDRISFEDVAGY 326
                     +          T  + G  C +GD         +    GD ++  D+  Y
Sbjct: 387 PSFYQAYHHVLPVRKSISSEGTYDIVGPICESGDFLAVDRRLAQEPVKGDLMAIMDIGAY 446

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366
            +   + +N        + + +      R  ++      +
Sbjct: 447 GMAMASNYNMRARAAEVLVDGNSWKIIRRRENFESLVRTM 486


>gi|254778756|ref|YP_003056861.1| Carboxynorspermidine decarboxylase [Helicobacter pylori B38]
 gi|254000667|emb|CAX28576.1| Carboxynorspermidine decarboxylase [Helicobacter pylori B38]
          Length = 405

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 136/400 (34%), Positives = 208/400 (52%), Gaps = 38/400 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y+++ ++L  N      +R+ +G K+LLALK +A W  F  L Q ++G  +S LY
Sbjct: 7   IPTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66

Query: 62  EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112
           E  L  E+FGG     E   Y+ A+K+ E+ A+L    +IIFN+  Q     ++  DK +
Sbjct: 67  EAKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNK 126

Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162
           +L        K+GLRINP  S     + +P    SRLG           ++    V+GL 
Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSGFERGVKEHGLEGVSGLH 186

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
           FH +CE          L+++E+ F  ++  + W++ GGG H T  DY V    Q +K+F 
Sbjct: 187 FHTHCEQN-ADALCRTLEHVERHFKPYLENMAWVNFGGGHHITKSDYDVNLLIQTIKDFK 245

Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
           E+Y   ++ LEPGEAI      L  +V+DI +N + + I+D+S   H+PD L      +I
Sbjct: 246 ERYHDIEVILEPGEAIGWQCGFLIASVIDIVQNDQEIAILDASFSTHMPDCLEMPYRPSI 305

Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
           +                 N G ++  + G +CLAGD  G F FE P+K GD+I F+D+  
Sbjct: 306 FKISVENDEELIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGDKIVFQDMLH 365

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y I + N FNG+ +P++A  +  G  K ++ FSY DY N 
Sbjct: 366 YTIVKNNSFNGVPLPSLAKLDQQG-FKILKNFSYEDYKNR 404


>gi|229183714|ref|ZP_04310934.1| Diaminopimelate decarboxylase [Bacillus cereus BGSC 6E1]
 gi|228599757|gb|EEK57357.1| Diaminopimelate decarboxylase [Bacillus cereus BGSC 6E1]
          Length = 449

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 58/400 (14%), Positives = 121/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 41  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 100

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F      ++   K  E    A+ +N    + +   +L    D A      
Sbjct: 101 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 160

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G         +  +  ++    N+ G+  H  
Sbjct: 161 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNMLGIHSHIG 220

Query: 167 CENKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F   ++ + +            ++ +++GGG      +              
Sbjct: 221 SQIFETAGFVRAIEVLHQFLEGVRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 280

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +           +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 281 TSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 340

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +    T  + G+ C +GD+         V   D ++      
Sbjct: 341 RPALYNARYEAMLANRGNDENEETVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 400

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 401 YGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGN 440


>gi|15611089|ref|NP_222740.1| putative carboxynorspermidine decarboxylase [Helicobacter pylori
           J99]
 gi|4154520|gb|AAD05600.1| putative carboxynorspermidine decarboxylase [Helicobacter pylori
           J99]
          Length = 405

 Score =  217 bits (552), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 137/400 (34%), Positives = 208/400 (52%), Gaps = 38/400 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y ++ ++L  N      +R+ +G K+LLALK +A W  F  L Q ++G  +S LY
Sbjct: 7   IPTPCYALESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66

Query: 62  EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112
           E  L  E+FGG     E   Y+ A+K+ E+ A+L    +IIFN+  Q     ++  DK +
Sbjct: 67  EAKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFHQYATYKDRILDKNK 126

Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162
           +L        K+GLRINP  S     + +P    SRLG       +   ++    V+GL 
Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSGFEKGVKEHGLEGVSGLH 186

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
           FH +CE          L+++E+ F  ++  + W++ GGG H T  DY V    Q +K+F 
Sbjct: 187 FHTHCEQN-ADALCRTLEHVERHFKPYLENMAWVNFGGGHHITRSDYDVNLLIQTIKDFK 245

Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
           E+Y   ++ LEPGEAI      L  +V+DI +N + + I+D+S  AH+PD L      +I
Sbjct: 246 ERYHNTEVILEPGEAIGWQCGFLIASVIDIVQNDQEIAILDASFSAHMPDCLEMPYRPSI 305

Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
                             N G ++  + G +CLAGD  G F FE P+K GD+I F+D+  
Sbjct: 306 LKVSVENDEEIIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGDKIVFQDMLH 365

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y I + N FNG+ +P++A  +  G  K ++ FSY DY N 
Sbjct: 366 YTIVKNNSFNGVPLPSLAKIDSQG-FKILKSFSYEDYKNR 404


>gi|124268300|ref|YP_001022304.1| diaminopimelate decarboxylase [Methylibium petroleiphilum PM1]
 gi|124261075|gb|ABM96069.1| diaminopimelate decarboxylase [Methylibium petroleiphilum PM1]
          Length = 424

 Score =  217 bits (552), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 55/387 (14%), Positives = 115/387 (29%), Gaps = 26/387 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  ++ +L  L             +  A+K  ++  +  T  Q   G    S  E
Sbjct: 31  GTPLYVYSRRAMLAALAPYQRALAGREHLICYAMKASSSLAVLQTFAQAGCGFDIVSGGE 90

Query: 63  VMLGH-EKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +              ++   K       A+          + ++L+   + A  L +   
Sbjct: 91  LDRVLAAGGDPGKVVFSGLGKTRAEMRRALEIGVRCFNVESEAELDVLSEVALSLGRVAP 150

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + LR+NP V              ++ G      + +  +        V G+  H   +  
Sbjct: 151 VSLRVNPDVDAKTHPYISTGLKGNKFGIAHDRAVAAYRRAAQLPGLKVVGIDCHIGSQIT 210

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS- 226
               +        ++ +       +I  + LGGG+     D         +     +   
Sbjct: 211 EIAPYLDAADRVLDLVEAIESSGLRIHHLDLGGGLGIQYTDERPPAADALIGALLARLDA 270

Query: 227 -----VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLL---YQE 277
                  +  EPG ++V N   L + VL +          VD+++   +   L       
Sbjct: 271 RGHGARTLVFEPGRSLVGNAGVLLSEVLYLKPGTHKNFCVVDAAMNDLMRPALYEATMSI 330

Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                 +  P    V G  C +GD  G       ++ GD ++      Y ++  + +N  
Sbjct: 331 VPCRLRDGVPVVYDVVGPVCESGDWLGRDRALA-LQPGDAVAVLSAGAYGMSMASNYNSR 389

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
                 + + D            + + 
Sbjct: 390 PRAAEVMVDGDVATLIREREPVAELFR 416


>gi|238060800|ref|ZP_04605509.1| diaminopimelate decarboxylase [Micromonospora sp. ATCC 39149]
 gi|237882611|gb|EEP71439.1| diaminopimelate decarboxylase [Micromonospora sp. ATCC 39149]
          Length = 462

 Score =  217 bits (552), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 57/398 (14%), Positives = 122/398 (30%), Gaps = 38/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+  L +               +  A K F    +   + +        +  E
Sbjct: 63  GTPVYVLDEDDLRSRCRDFRAAF--PDADVYYAGKAFLCRAVVRMIAEEGMFLDVCTGGE 120

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +          E   ++   K       A+ +    I+ ++ +++++    A++   + G
Sbjct: 121 LATALSAGMPAERIGFHGNNKSVAELTRALDAGVGRIVLDSFTEIDRLTALARERGVRPG 180

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168
             +R+   V               + G               I+  + ++ GL  H   +
Sbjct: 181 VLIRVTVGVEAHTHEFIATAHEDQKFGFSLAGGAAAAAAFKVIDEGVLDLLGLHSHIGSQ 240

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP----VKDFCQRLKE 220
                 F      ++    +       ++  + LGGG              +D  +RL++
Sbjct: 241 IFDASGFEVSARRVIALQAQIRDARGVELPELDLGGGFGIAYTTQDDPAAPQDLAKRLRK 300

Query: 221 FSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271
             +           ++ +EPG AIV         V  +         V     +  ++  
Sbjct: 301 IVDGECAAERLAVPRLSIEPGRAIVGPAVFTLYEVGTVKNVDGIRTYVSVDGGMSDNIRT 360

Query: 272 YLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326
            L         A+      P  A V G+ C +GDI  +  F    V+ GD ++      Y
Sbjct: 361 ALYDASYSATLASRASAAEPLLARVVGKHCESGDIVVKDEFLPADVQAGDLVAVPGTGAY 420

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N +  P +           +R  +  D   
Sbjct: 421 CRSMASNYNHVPRPAVVAVCDGQARLIVRRETEEDLLA 458


>gi|315057735|gb|ADT72064.1| Diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni
           S3]
          Length = 402

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 58/379 (15%), Positives = 125/379 (32%), Gaps = 22/379 (5%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+Y+ +   +           K    ++  A+K  +   +   L     G    S+ EV
Sbjct: 12  TPFYIYNFDFIKERFLNLKEAFKARKSQIFYAVKANSNLSLLQMLANLDSGFDCVSIGEV 71

Query: 64  MLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
                         ++   K  +    A+  +   I   + +++   +  A++L+ K  +
Sbjct: 72  KRALKAGAKAYKIIFSGVGKTKEELRQALEYDILYINLESEAEMMLLESVAKELNLKARI 131

Query: 121 --RINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCE--- 168
             R+NP+V              ++ G +             S      G+ FH   +   
Sbjct: 132 SIRVNPNVDAKTHPYISTGLNENKFGVEIDIARKMYLYAKNSSFLEPVGVHFHIGSQLLD 191

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK 224
                  +A++  + +E       +++  +GGG+    +       + ++ Q +      
Sbjct: 192 ISPIHEAAAIVAKLARELKALQIDLKFFDIGGGLGVAYEKDECEPDLYNYAQGILAQLHG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I +EPG  +V  +     +VL       K  V+VD ++   +   L       I P
Sbjct: 252 LDLTIGMEPGRYLVAKSGEFVCSVLYEKQNKTKRFVVVDGAMNDLIRPSLYEAYHEIILP 311

Query: 284 NTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
            T        V G  C +GD F +       + GD +  ++   Y  +  + +N  N   
Sbjct: 312 YTQAQESLCDVVGGICESGDFFAKARSLPSTQSGDIMVIKNTGAYGFSMSSNYNTRNKVC 371

Query: 342 IAVKNVDGTIKAIREFSYN 360
                        +  ++ 
Sbjct: 372 ELALEEGQVRLIRQRENFE 390


>gi|283955208|ref|ZP_06372709.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni
           414]
 gi|283793245|gb|EFC32013.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni
           414]
          Length = 402

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 56/383 (14%), Positives = 122/383 (31%), Gaps = 22/383 (5%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+Y+ +   +           K    ++  A+K  +   +   L     G    S+ EV
Sbjct: 12  TPFYIYNFDSIKERFLNLKDAFKARKSQIFYAVKANSNLSLLQMLANLDSGFDCVSIGEV 71

Query: 64  MLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIGL 120
                         ++   K  E   +    D   I   + +++   +  A++L  K  +
Sbjct: 72  KRVLKAGAKAYKIIFSGVGKTKEELKLALEYDILYINLESEAEMMLLESVAKELRLKARI 131

Query: 121 --RINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCE--- 168
             R+NP+V              ++ G +             S      G+ FH   +   
Sbjct: 132 SIRVNPNVDAKTHPYISTGLNENKFGVEIDIARKMYLYAKNSSFLEPVGVHFHIGSQLLD 191

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK 224
                  + ++  + +E       +++  +GGG+    +       + ++ Q +      
Sbjct: 192 ISPIHEAAGIVAKLVRELKALQIDLKFFDIGGGLGVAYEKDECEPDLYNYAQGILAQLHG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I +EPG  +V  +     +VL       K  ++VD ++   +   L       + P
Sbjct: 252 LDLTIGMEPGRYLVAKSGEFVCSVLYEKQNKTKRFIVVDGAMNDLIRPSLYEAYHEIVLP 311

Query: 284 NTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                     V G  C +GD F +       + GD +  ++   Y  +  + +N  N   
Sbjct: 312 YNQSEENLCDVVGGICESGDFFAKARSLPSTQSGDIMVVKNTGAYGFSMSSNYNTRNKVC 371

Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364
                        +  ++ D   
Sbjct: 372 ELALEEGQVRLIRQRENFQDQIA 394


>gi|150400645|ref|YP_001324411.1| diaminopimelate decarboxylase [Methanococcus aeolicus Nankai-3]
 gi|150013348|gb|ABR55799.1| diaminopimelate decarboxylase [Methanococcus aeolicus Nankai-3]
          Length = 435

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 68/398 (17%), Positives = 134/398 (33%), Gaps = 35/398 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK------LLLALKCFAAWGMFDTLNQYMDGTT 56
            TP Y++ + +++ N        K    K      +  A K  +   +   L     G  
Sbjct: 30  GTPLYVMSESQIVKNFTRYTEAFKEYSEKTGKEFIVSYAYKANSNLAVLKILTNLGCGAD 89

Query: 57  SSSLYEVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
             S  E+              +N     ++  I  + +N      +++S+L    + A K
Sbjct: 90  VVSGGELYTAKMVSVDSSKIVFNGNCKLEEEIIMGIETNIRAFNVDSISELELINEVAGK 149

Query: 114 LHK--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLM 162
           L K   +  RINP+V+             ++ G   +            E +   + G+ 
Sbjct: 150 LGKVANVAFRINPNVNPKTHPKISTGLKSNKFGLDVEAGIALKAIKMAKEMKNVKIVGIH 209

Query: 163 FHNNCENKSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKDYP----VKDFC 215
            H   +      F    K +            +IE +++GGG+             KD  
Sbjct: 210 CHIGSQLTDISPFVEETKKVMDFVVSLKEQGIKIEDVNIGGGLGVPYDKNTEIPVQKDLA 269

Query: 216 QRLKEFSEKYS-----VQIYLEPGEAIVTNTTTLNTTVLDISENIK-NLVIVDSSVEAHV 269
             +     +Y+       + +EPG ++V     L   V  I E      +++D+ +   +
Sbjct: 270 NAVINTMLEYADKVELPNLIIEPGRSLVATAGVLLGKVHHIKETPSAKWIMIDAGMNDMM 329

Query: 270 PDYLL--YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
              +   Y E              + G  C + D+FG+      +++ D I+  DV  Y 
Sbjct: 330 RPAIYEAYHEITPCTIRDEKEVVNIAGGLCESSDVFGKERELPKIEVKDTIAILDVGAYG 389

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           I+  N +N   +  + + + DG        +Y D  + 
Sbjct: 390 ISMANNYNARGISKMILTSEDGAYTIRERETYADLLSK 427


>gi|332529506|ref|ZP_08405464.1| diaminopimelate decarboxylase [Hylemonella gracilis ATCC 19624]
 gi|332041026|gb|EGI77394.1| diaminopimelate decarboxylase [Hylemonella gracilis ATCC 19624]
          Length = 440

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 59/400 (14%), Positives = 119/400 (29%), Gaps = 40/400 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA----GVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
            TP ++  +Q +L+ L        +       ++  ALK  ++  +     +   G    
Sbjct: 38  GTPLFVYSQQAMLDALAAYQRGLASRLAQGKARICYALKANSSLAILQLFARAGCGFDIV 97

Query: 59  SLYEVMLGHE--KFGGETHAYNVAYKDCEIDAVLS-----NCDTIIFNTVSQLNKFKDKA 111
           S  E+                 V     E+   L+             + ++L+   + A
Sbjct: 98  SGGELERVLAAGGDPARVIFSGVGKTRAEMRQALNAGQGAGIGCFNVESEAELDVLNEVA 157

Query: 112 QKLHK--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLM 162
             L K   + +R+NP V              ++ G   +  +             V G+ 
Sbjct: 158 TALGKVAPVSIRVNPDVDAKTHPYISTGLKGNKFGIAHERAVAVYQHAARLPGLKVVGID 217

Query: 163 FHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK 219
            H   +      +   L+   ++ +        +  I LGGG+               L 
Sbjct: 218 CHIGSQITEERPYLDALERVLDLVEAIEAAGIPLHHIDLGGGLGIDYHG-DTPPAADALW 276

Query: 220 EFS-------EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPD 271
                           I++EPG ++V N     T VL +    +    + D+++      
Sbjct: 277 HKLLARVDARGHADKAIFIEPGRSLVGNAGVCLTEVLYLKPGEQKNFCIVDAAMNDLPRP 336

Query: 272 YLLYQESATI-------YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
            +       +           G     V G  C +GD  G       V+ GD+++     
Sbjct: 337 AMYEAYHQIVPLAPREPAQAGGAVNYEVVGPICESGDWLGHDRALS-VQAGDQLAVLSAG 395

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            Y ++  + +N        +   D  I   +  S  D + 
Sbjct: 396 AYCMSMASNYNTRGRAAEVLVQGDQAILIRQRESAADSFR 435


>gi|217958996|ref|YP_002337544.1| diaminopimelate decarboxylase [Bacillus cereus AH187]
 gi|217065258|gb|ACJ79508.1| diaminopimelate decarboxylase [Bacillus cereus AH187]
          Length = 438

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 58/400 (14%), Positives = 120/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 30  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F      ++   K  E    A+ +N    + +   +L    D A      
Sbjct: 90  GELYTALQAGFPASRIHFHGNNKTDEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G         +  +  ++    NV G+  H  
Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F   ++ + +            ++ +++GGG      +              
Sbjct: 210 SQIFETAGFVRAIEVLRQFLEAVRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +           +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 270 TSAVREQFTLCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +       + G+ C +GD+         V   D ++      
Sbjct: 330 RPALYNARYEAMLANRGNDENEEVVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 390 YGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGN 429


>gi|163939333|ref|YP_001644217.1| diaminopimelate decarboxylase [Bacillus weihenstephanensis KBAB4]
 gi|229132325|ref|ZP_04261179.1| Diaminopimelate decarboxylase [Bacillus cereus BDRD-ST196]
 gi|163861530|gb|ABY42589.1| diaminopimelate decarboxylase [Bacillus weihenstephanensis KBAB4]
 gi|228651031|gb|EEL07012.1| Diaminopimelate decarboxylase [Bacillus cereus BDRD-ST196]
          Length = 438

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 60/400 (15%), Positives = 124/400 (31%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 30  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+       F      ++     ++  I A+ +N    + +   +L    D A +    
Sbjct: 90  GELYTALQAGFPASRIHFHGNNKTEEEMIMALQANIGCFVVDNFLELEILHDLAMQHGKF 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G         +  +  ++    NV G+  H  
Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQEDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVK---------- 212
            +      F   ++ + +       +    ++ +++GGG      D              
Sbjct: 210 SQIFETAGFVRAIEVLRQFLEEVRERTHYVMKVLNVGGGFGIRYTDSDTPLTLETYVHAV 269

Query: 213 -DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +      E    +I++EPG +IV +  T   TV  + E       V     +  ++
Sbjct: 270 TSTIREQFTLCEYPLPEIWVEPGRSIVGDAGTTLYTVGAVKEIPGIRKYVSVDGGMTDNL 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +       + G+ C +GD+         V   D ++      
Sbjct: 330 RPALYGARYEAMLANRGNDENEELVSIAGKCCESGDMLIWDINLPQVASSDLLAISCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQIVVERETYENIIGN 429


>gi|196047333|ref|ZP_03114547.1| diaminopimelate decarboxylase [Bacillus cereus 03BB108]
 gi|225863382|ref|YP_002748760.1| diaminopimelate decarboxylase [Bacillus cereus 03BB102]
 gi|196021844|gb|EDX60537.1| diaminopimelate decarboxylase [Bacillus cereus 03BB108]
 gi|225788611|gb|ACO28828.1| diaminopimelate decarboxylase [Bacillus cereus 03BB102]
          Length = 438

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 58/400 (14%), Positives = 121/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 30  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F      ++   K  E    A+ +N    + +   +L    D A      
Sbjct: 90  GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G         +  +  ++    N+ G+  H  
Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNMLGIHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F   ++ + +            ++ +++GGG      +              
Sbjct: 210 SQIFETAGFVRAIEVLHQFLEGVRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +           +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 270 TSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +    T  + G+ C +GD+         V   D ++      
Sbjct: 330 RPALYNARYEAMLANRGNDENEETVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 390 YGYSMANNYNRIRRPAVVFVKGGTSQIVVERETYENIIGN 429


>gi|108757300|ref|YP_634066.1| diaminopimelate decarboxylase [Myxococcus xanthus DK 1622]
 gi|108461180|gb|ABF86365.1| diaminopimelate decarboxylase [Myxococcus xanthus DK 1622]
          Length = 413

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 50/368 (13%), Positives = 114/368 (30%), Gaps = 22/368 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+     L  ++        +    +  ++K  +   +   + +   G    S  
Sbjct: 25  VGTPTYVYSTATLTRHIRVVTEAFGDRPHLICYSVKANSNLAILRLIAERGGGFDIVSGG 84

Query: 62  EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E+              +      ++    A+ +        +  +L       ++L    
Sbjct: 85  ELARVRHVGGDAGKTVFAGVGKTQEEMEAALAAGILLFNVESAEELEALDAVGRRLGRRA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCEN 169
              LR+NP V              S+ G   ++ +    +          GL  H   + 
Sbjct: 145 PFALRVNPDVDARTHRYISTGLKTSKFGVPFEEAVALYARAKKMKGLLAAGLDCHIGSQL 204

Query: 170 KSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSE 223
                     + +  +          + ++ +GGG+  T  D       ++ + +   + 
Sbjct: 205 TQTAPIRAALSKVAGLYSALKEKGHPLAYLDVGGGLGITYLDETPPSPEEYARTVLAAAG 264

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQES---A 279
                + LEPG A+V N   L T VL   +   ++ V+VD+ +   +   L         
Sbjct: 265 ATGATLILEPGRALVGNAGVLLTRVLYRKKTPARHFVVVDAGMNDLLRPALYEAHHGLQP 324

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            +          V G  C + D+  +       + G+  +F     Y ++  + +N    
Sbjct: 325 LVKRRGKAVEVDVVGPVCESTDVLAKARPLVLPQAGELFAFMSAGAYGMSMSSTYNSRPR 384

Query: 340 PTIAVKNV 347
           P   + + 
Sbjct: 385 PAEVLVDG 392


>gi|227890997|ref|ZP_04008802.1| diaminopimelate decarboxylase [Lactobacillus salivarius ATCC 11741]
 gi|227867406|gb|EEJ74827.1| diaminopimelate decarboxylase [Lactobacillus salivarius ATCC 11741]
          Length = 430

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 65/400 (16%), Positives = 129/400 (32%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D  K+   +       +   VK  +  A K F++  M+D + +   G+   S 
Sbjct: 28  GTPTIVYDVAKIKEQIAKFKAGFEEENVKYHISYASKAFSSLAMYDLVAKSGIGSDVVSG 87

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK- 116
            E+    +     +   ++   K      +   SN   II +   +++   +   + +K 
Sbjct: 88  GELYAALKGGMDPQELEFHGNNKSRAELEMAVDSNVGYIIVDNFYEIDLLNEVLTEKNKT 147

Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I LR+ P +           +  S+ G         E  +  + +    V G+  H  
Sbjct: 148 ANILLRLAPGIHAETHEYISTGQAKSKFGFDLQSGQASEALEKTLANPRFKVLGVHSHIG 207

Query: 167 CEN----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK--------DF 214
            +             ++  +      +    E ++LGGG      D              
Sbjct: 208 SQIFATAGFVEAAKKLMDFLSAWREKYNFTAEVLNLGGGFGIRYTDQDEPLDVKDFVKII 267

Query: 215 CQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            + +KE S++    +   ++EPG ++V        TV    +       V     +  ++
Sbjct: 268 VEAVKEKSKELDYPMPAIWIEPGRSVVGEAGVSLYTVGSRKDVEDVGSFVAVDGGMGDNI 327

Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   E   +            A + G+ C +GDI  + +     + GD I+      
Sbjct: 328 RPALYGAEYDAVLAKDPNAPIAQNASIVGKFCESGDILIKDYDFPKTEPGDVIAMLSTGA 387

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y     + +N    P I           ++  SY D   N
Sbjct: 388 YGYVMASNYNRNPRPAIVFVEDGKARLVVKRESYEDMIRN 427


>gi|148926410|ref|ZP_01810093.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|145844573|gb|EDK21679.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni
           CG8486]
          Length = 402

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 57/383 (14%), Positives = 123/383 (32%), Gaps = 22/383 (5%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+Y+ +   +           K    ++  A+K  +   +   L     G    S+ EV
Sbjct: 12  TPFYIYNFDFIKERFLNLKEAFKARKSQIFYAVKANSNLSLLQMLANLDSGFDCVSIGEV 71

Query: 64  MLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
                         ++   K  +    A+  +   I   + +++   +  A++L+ K  +
Sbjct: 72  KRALKAGAKAYKIIFSGVGKTKEELRQALEYDILYINLESEAEMMLLESVAKELNLKARI 131

Query: 121 --RINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCE--- 168
             R+NP+V              ++ G +             S      G+ FH   +   
Sbjct: 132 SIRVNPNVDAKTHPYISTGLNENKFGIEIDIARKMYLYAKNSSFLEPVGVHFHIGSQLLD 191

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK 224
                  + ++  + +E       +++  +GGG+    +       + D+ Q +      
Sbjct: 192 ISPIHEAAGIVAKLVRELKALQIDLKFFDIGGGLGVAYEKDECESDLYDYAQGILAQLHG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I +EPG  +V  +     +VL       K  V+VD ++   +   L       I P
Sbjct: 252 LDLTIGMEPGRYLVAKSGEFVCSVLYEKQNKTKRFVVVDGAMNDLIRPSLYEAYHEIILP 311

Query: 284 NTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                     V G  C +GD F +       +  D +  ++   Y  +  + +N  N   
Sbjct: 312 YNQGEESLCDVVGGICESGDFFAKARSLPSTQSDDIMVIKNTGAYGFSMSSNYNTRNKVC 371

Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364
                        +  ++ D   
Sbjct: 372 ELALEEGQVRLIRQRENFEDQIA 394


>gi|89897723|ref|YP_521210.1| hypothetical protein DSY4977 [Desulfitobacterium hafniense Y51]
 gi|219670871|ref|YP_002461306.1| diaminopimelate decarboxylase [Desulfitobacterium hafniense DCB-2]
 gi|89337171|dbj|BAE86766.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219541131|gb|ACL22870.1| diaminopimelate decarboxylase [Desulfitobacterium hafniense DCB-2]
          Length = 416

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 65/393 (16%), Positives = 115/393 (29%), Gaps = 31/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+++ D++ +  N            G K   A+K      +   L +   G   SSL 
Sbjct: 21  GTPFHIYDEEAIRKNAQRLQAAFAWAPGFKEYFAVKALPNPYILKILGEEGFGADCSSLA 80

Query: 62  EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E++L        E            E          I  + ++ ++  +         + 
Sbjct: 81  ELILAEKAGITEENIMLTSNNTPAEEFQKAKDLWAIINLDDITHIDYLEKHTGLPE--VL 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE----IKNVNGLMFHNNCENK----- 170
                  S         N   S+ G   +   ++      K V     H    +      
Sbjct: 139 SFRYNPGSLRAGNAIIGNPEESKYGLTKEQLFQAYEIVRDKGVKRFGLHTMIISNELNPD 198

Query: 171 -SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
                   M     +       ++E+++ GGGI    +        + + E   K   + 
Sbjct: 199 FFIETAEMMFDLAIELKEKLGIRLEFVNFGGGIGIPYRPEQEPVNLETIGEGVRKVYEEK 258

Query: 230 Y-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                       LE G  I      L T VL   +  KN + VD+S+   +   +     
Sbjct: 259 IVAKGLDPLRICLECGRMITGPYGYLVTKVLHRKDTYKNYIGVDASMSDLMRPGIYGAYH 318

Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        ++IGD +   D   +       +
Sbjct: 319 HITVMGKEDLPEDHIYDVTGSLCENNDKFAVDRELPRIEIGDTLVIHDTGAHGHAMGFNY 378

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       +   DG++K IR   +  DY+  L
Sbjct: 379 NGKLRHAELLLQADGSVKLIRRAETLEDYFATL 411


>gi|302343308|ref|YP_003807837.1| diaminopimelate decarboxylase [Desulfarculus baarsii DSM 2075]
 gi|301639921|gb|ADK85243.1| diaminopimelate decarboxylase [Desulfarculus baarsii DSM 2075]
          Length = 420

 Score =  216 bits (551), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 63/385 (16%), Positives = 112/385 (29%), Gaps = 24/385 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+  +  +                 +  A+K  +   +  +      G    S  
Sbjct: 25  VGTPTYVYAQSAMRAEFAAFQEAFAGLDHLICYAMKANSNKAVLGSFAAMGGGADIVSGG 84

Query: 62  EVMLGHE-KFGGETHAYNV-AYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E+          E   Y+     D E++A   +        +  +L      A +L    
Sbjct: 85  ELARALAAGVPAERIVYSGVGKLDWELEAALKAGILMFNVESAQELTVLDQIAGRLGLKA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCEN 169
            + LR+NP V              ++ G                    V G+  H   + 
Sbjct: 145 PVSLRVNPDVDAKTHPKITTGLAKNKFGLDMGLAFAQYLHAARLPNLVVKGVSCHIGSQL 204

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSE 223
                F   L+ +    +       ++E I LGGGI             ++  RL+   E
Sbjct: 205 TEVAPFVDALERLADLVQRLRREGLRLEIIDLGGGIGIRYNQETPPTPREYAARLRPVLE 264

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
              +++ LEPG  +V     L T V    +   K+ V+VD+++   +         A   
Sbjct: 265 GLGLKLVLEPGRRLVGEAGVLLTRVHYAKTTPAKHFVVVDAAMNDLIRPAFYDSFHAVRP 324

Query: 283 PNTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                       A V G  C  GD          ++ GD ++      Y     + +N  
Sbjct: 325 VAQNAGNGQRLVADVVGGICETGDFLVRERDLPVLRRGDLLAIMSAGAYGFAMSSQYNSR 384

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDY 362
                 +          R  S  D 
Sbjct: 385 PRAAEVLVCGQEWAVVRRRESIEDL 409


>gi|258541957|ref|YP_003187390.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO
           3283-01]
 gi|256633035|dbj|BAH99010.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO
           3283-01]
 gi|256636092|dbj|BAI02061.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO
           3283-03]
 gi|256639147|dbj|BAI05109.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO
           3283-07]
 gi|256642201|dbj|BAI08156.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO
           3283-22]
 gi|256645256|dbj|BAI11204.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO
           3283-26]
 gi|256648311|dbj|BAI14252.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO
           3283-32]
 gi|256651364|dbj|BAI17298.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256654355|dbj|BAI20282.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO
           3283-12]
          Length = 447

 Score =  216 bits (551), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 57/388 (14%), Positives = 116/388 (29%), Gaps = 27/388 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           + TP +++    L   +       +NAG  V +  A+K      +   + Q   G    S
Sbjct: 46  VGTPCWVLGAGTLRARMRRMHTAMRNAGLDVSIHYAVKANDHLAILTLIGQEGFGADIVS 105

Query: 60  LYEVMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKL-- 114
             E+          +   ++   K       A+      I   +  +L      A KL  
Sbjct: 106 GGELARALKAGIPADRIVFSGVGKTDAELEQAISHGIGQINVESAEELEAISAIATKLGK 165

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNC 167
              I LR+NP V              ++ G   +D                 G   H   
Sbjct: 166 QATITLRVNPDVDAKTHAKITTGLAANKFGIPFQDAAALYAHAFTLPGVRPVGFATHIGS 225

Query: 168 ENKSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEF 221
           +  +   + A    +    +        +  +  GGG+    ++            +K  
Sbjct: 226 QILTTTPYRAAYARVAELVRTVRAAGNAVSVVDCGGGLGICYRNETEGQPEALAGAIKAE 285

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV--DSSVEAHVPDYLLYQESA 279
                V++ +EPG   +     L ++V+   E   ++  +  D+++   +   +      
Sbjct: 286 LGGLGVKLAIEPGRWPIGPAGVLLSSVILRKEQGMDVPFLVLDAAMNELLRPSMYDAWHG 345

Query: 280 TIYPNTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
            +      ++     A V G  C +GD F       P+    RI+  D   Y     + +
Sbjct: 346 ILPLAPQAFSQPVSLAHVVGPVCESGDTFARDRLLPPLARNARIALLDTGAYGAVMSSTY 405

Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDY 362
           N   +    +          +  S  + 
Sbjct: 406 NSRPLAAEVLVEDGQWQVIRQRQSVEEL 433


>gi|331702338|ref|YP_004399297.1| diaminopimelate decarboxylase [Lactobacillus buchneri NRRL B-30929]
 gi|329129681|gb|AEB74234.1| diaminopimelate decarboxylase [Lactobacillus buchneri NRRL B-30929]
          Length = 435

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 67/399 (16%), Positives = 132/399 (33%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           KTP  + D + + + +     + ++ GV   +  A K FA   MF  +NQ        S 
Sbjct: 31  KTPLVVYDVKSIRDQIHHFQKVFQDNGVDFAVSYASKAFACIAMFQLINQEKGHIDVVSG 90

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E  +++   K  E   +        II +   +++  K+  +     
Sbjct: 91  GELYTAIKAGFPMERVSFHGNDKSREELEMAVEHQIGVIILDNFHEIDLLKEVLEDKQSH 150

Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
           I   LR+ P VS          +  S+ G   +           +E E  N+ G+  H  
Sbjct: 151 INVMLRVTPGVSAHTHEYDQTGQVDSKFGFDIQSGQARKALGLVLEDERMNMLGIHCHIG 210

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQI----EWISLGGGIHFTDKDYPVKD--------F 214
            +      F      +      +  +I    + +++GGG      +              
Sbjct: 211 SQIFEVNGFEMAAVKLIDTLADWNKEIGYVAKVVNVGGGFGIKYTEDDDPIAPEMFVDAI 270

Query: 215 CQRLKEFSEK---YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            + +K+ +E+       +++EPG +I         TV    +       V     +  ++
Sbjct: 271 VKAIKKRTEEVNLPMPAVWIEPGRSIAGPAGYNLYTVGSRKDVPGIRSYVTVDGGMGDNI 330

Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   +           T  + G+ C +GDI  +       + GD ++  D   
Sbjct: 331 RPALYQAKYEAVLAKDPSAPIKETVRIAGKYCESGDILIQKQDLPATQPGDVLAMLDTGA 390

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y     + +N    P +       +  AIR  ++ D   
Sbjct: 391 YGYAMASNYNRNPRPAVVFVENGKSQVAIRRETFEDLVA 429


>gi|304412536|ref|ZP_07394142.1| diaminopimelate decarboxylase [Shewanella baltica OS183]
 gi|307307195|ref|ZP_07586933.1| diaminopimelate decarboxylase [Shewanella baltica BA175]
 gi|304349178|gb|EFM13590.1| diaminopimelate decarboxylase [Shewanella baltica OS183]
 gi|306910434|gb|EFN40865.1| diaminopimelate decarboxylase [Shewanella baltica BA175]
          Length = 414

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 61/382 (15%), Positives = 111/382 (29%), Gaps = 23/382 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  A   + + L +   G    S  E
Sbjct: 26  GTPLYIYSRATLERHWHAFNNAVADHPHLICYAVKANANLAVLNVLARLGSGFDIVSGGE 85

Query: 63  VMLGHE-KFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +    E         ++   K       A+          + ++L +    A +L K   
Sbjct: 86  LARVMEAGGDPAKVVFSGVGKTAAEMEQALNLGIYCFNVESSAELEQLNLVAGRLGKVAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNC--- 167
           + LRINP V              ++ G    +              NV G+  H      
Sbjct: 146 VSLRINPDVDAGTHPYISTGLKENKFGIAMDEAEIVFARAHALPHLNVKGVDCHIGSQLT 205

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
           E K FL     +  +          IE   +GGG+  T           +   +      
Sbjct: 206 EIKPFLDAMDRMLALIDRLAEQGIVIEHFDVGGGLGVTYDAETPPHPDVYAAAILARLGD 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQE---SAT 280
             +++  EPG AI  N     T VL +   + K   IVD ++   +   L          
Sbjct: 266 RQLKLIFEPGRAIAANAGIFVTQVLYLKENSDKRFAIVDGAMNDLIRPALYSAWQNIIPV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
           +  ++  Y   + G  C  GD  G+            ++      Y     + +N     
Sbjct: 326 VPRDSEAYEFDIVGPVCETGDFLGKNRQLALAAGD-LLAVRSSGAYGFAMASNYNTRPRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDY 362
              + + +           +  
Sbjct: 385 AEVMVDGEQAFLVREREKLSQL 406


>gi|302536936|ref|ZP_07289278.1| diaminopimelate decarboxylase [Streptomyces sp. C]
 gi|302445831|gb|EFL17647.1| diaminopimelate decarboxylase [Streptomyces sp. C]
          Length = 463

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 62/398 (15%), Positives = 122/398 (30%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y +D++          +        +  A K F +  +   L +        S  E
Sbjct: 63  GTPAYFLDEEDFRARCRAWAHAFGK-DADVFYAGKAFLSKAVVKWLKEEGLNLDVCSGGE 121

Query: 63  VMLGHEK-FGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +          E  A++   K       A+ +    I+ ++  ++ +    A++L   + 
Sbjct: 122 LATALAAEMPAERIAFHGNNKSESEIRRAITAGVGRIVLDSFQEIARVAHIARELGVRQP 181

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G    D          +  +   + G+  H   +
Sbjct: 182 VQIRVTVGVEAHTHEFIATAHEDQKFGIAVADGSAAEAVRRALGHDSLELLGVHSHIGSQ 241

Query: 169 NKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLK 219
                 F    K + +           ++  I LGGG+            P +      +
Sbjct: 242 IFDMAGFEVSAKRVVRLLAAVRDEHGVELPEIDLGGGLGIAYTSADDPREPHEIAKALTE 301

Query: 220 EFSEKYS------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271
             + +         +I +EPG AIV  T      V  I      +  V VD  +  ++  
Sbjct: 302 IVARECESAGLKAPRISVEPGRAIVGPTAFTLYEVGTIKPLEGLRTYVSVDGGMSDNIRT 361

Query: 272 YLLYQESATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326
            L   E A        +  P    V G+ C +GDI  +  F    +  GD ++      Y
Sbjct: 362 ALYDAEYAVTLVSRVSDAEPMLVRVVGKHCESGDIVVKDAFLPADLAPGDLLAVPATGAY 421

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N    P +           +R  +  D  +
Sbjct: 422 CRSMASNYNHALRPPVVAVRDGAARVIVRRETEEDLLS 459


>gi|205356036|ref|ZP_03222804.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|205346160|gb|EDZ32795.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni
           CG8421]
          Length = 402

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 57/383 (14%), Positives = 123/383 (32%), Gaps = 22/383 (5%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+Y+ +   +           K    ++  A+K  +   +   L     G    S+ EV
Sbjct: 12  TPFYIYNFDFIKERFLNLKEAFKARKSQIFYAVKANSNLSLLQMLANLDSGFDCVSIGEV 71

Query: 64  MLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
                         ++   K  +    A+  +   I   + +++   +  A++L+ K  +
Sbjct: 72  KRALKAGAKAYKIIFSGVGKTKEELRQALEYDILYINLESEAEMMLLESVAKELNLKARI 131

Query: 121 --RINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCE--- 168
             R+NP+V              ++ G +             S      G+ FH   +   
Sbjct: 132 SIRVNPNVDAKTHPYISTGLNENKFGVEIDIARKMYLYAKNSSFLEPVGVHFHIGSQLLD 191

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK 224
                  + ++  + +E       +++  +GGG+    +       + D+ Q +      
Sbjct: 192 ISPIHEAAGIVAKLVRELKALQIDLKFFDIGGGLGVAYEKDECESDLYDYAQGILAQLHG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I +EPG  +V  +     +VL       K  V+VD ++   +   L       I P
Sbjct: 252 LDLTIGMEPGRYLVAKSGEFVCSVLYEKQNKTKRFVVVDGAMNDLIRPSLYEAYHEIILP 311

Query: 284 NTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                     V G  C +GD F +       +  D +  ++   Y  +  + +N  N   
Sbjct: 312 YNQGEESLCDVVGGICESGDFFAKARSLPSTQSDDIMVIKNTGAYGFSMSSNYNTRNKVC 371

Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364
                        +  ++ D   
Sbjct: 372 ELALEEGQVRLIRQRENFEDQIA 394


>gi|300775431|ref|ZP_07085293.1| diaminopimelate decarboxylase [Chryseobacterium gleum ATCC 35910]
 gi|300506171|gb|EFK37307.1| diaminopimelate decarboxylase [Chryseobacterium gleum ATCC 35910]
          Length = 400

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 71/385 (18%), Positives = 119/385 (30%), Gaps = 26/385 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D + +    +           K   A K      +   +          S+ E
Sbjct: 14  GTPVYVYDAESIKIQYEKLTSSF-LKHTKFFYAAKALTNINILKYVKNLGASLDCVSINE 72

Query: 63  VMLGH-EKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           V LG    F  E   +     D  EI+  ++    I  + +S L +F +K       I +
Sbjct: 73  VKLGLKAGFPKEKILFTPNCVDLAEIEEAMTFGVHINIDNISILEQFGNKYGN-SYPILV 131

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIE------SEIKNVNGLMFHNNCENKSFLC 174
           RINP +              S+ G              S   NV GL  H   E K    
Sbjct: 132 RINPHIFAGGNYKISTGHIDSKFGISIHQVRHIERVMKSTNLNVEGLHMHTGSEIKDPDV 191

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK---------- 224
           F   L  +  E       ++++ +G G     +D   +   + L +  EK          
Sbjct: 192 FLQALDIML-ELSEHFPNLKYLDMGSGFKIPYQDSEEETDVKTLGKKVEKVISEFSKSTG 250

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLL--YQESATI 281
              +++ EPG+ +V  +  L      I +    + + V+S     +       Y     +
Sbjct: 251 KKFELWFEPGKFLVGKSGYLLVKANVIKQTTATVFVGVNSGFNHLIRPMFYDSYHMIENL 310

Query: 282 YPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
               G      V G  C   D F        V+ GD ++F +   Y     + FN    P
Sbjct: 311 SNPKGAERIYTVVGNICET-DTFAWDRKLNEVREGDILAFHNAGAYGFEMSSNFNSRLKP 369

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              +          +   + D   N
Sbjct: 370 AEVLFLDGKAHLIRKRDEFEDLLRN 394


>gi|225012701|ref|ZP_03703136.1| diaminopimelate decarboxylase [Flavobacteria bacterium MS024-2A]
 gi|225003234|gb|EEG41209.1| diaminopimelate decarboxylase [Flavobacteria bacterium MS024-2A]
          Length = 408

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 59/384 (15%), Positives = 115/384 (29%), Gaps = 27/384 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           P Y+ D  K+           K    +++  A K  +   +   + +   G  + S+ EV
Sbjct: 16  PVYVYDANKIEQQFTRLQNAFKGVEKLRINYACKALSNLSILGLMKKMGSGLDTVSIQEV 75

Query: 64  MLG-HEKFGGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            +G    F  +   +       E           I  + +S L +F  K    +  + +R
Sbjct: 76  QMGIKAGFKPKDIIFTPNGVSLEEIEKAAKIGVQINIDNLSILEQFGTK--HPNIPVCIR 133

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFLCF 175
           INP V              S+ G                  ++NG+  H   +      F
Sbjct: 134 INPHVMAGGNSNISVGHIDSKFGISIHQIPHVLRIVENTKMHINGVHMHTGSDILDIEVF 193

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY----- 230
               + I  +       +E++  G G     ++  ++   + L E   +   +       
Sbjct: 194 LYASE-ILFDTALQFKNLEFLDFGSGFKVPYREGDIETNIEELGEKLTERFHRFCETYGS 252

Query: 231 -----LEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIYPN 284
                 EPG+ +V+        V  + +        VDS     +   L          +
Sbjct: 253 TLELAFEPGKFLVSQAGYFLVQVNAVKQTTSTVFAQVDSGFNHLIRPMLYGSHHEIKNIS 312

Query: 285 T---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                     V G  C   D FG       +  GD ++F++   Y     + +N    P 
Sbjct: 313 KPNGKERFYTVVGYICET-DTFGSNRKIAEISEGDILAFQNAGAYCFTMASNYNSRFRPA 371

Query: 342 IAVKNVDGTIKAIREFSYNDYYNN 365
             +   +      +  ++ D   N
Sbjct: 372 EILWYNNQAHVIRKRETFEDLVYN 395


>gi|121612594|ref|YP_001000024.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|167004982|ref|ZP_02270740.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|87250310|gb|EAQ73268.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 402

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 57/379 (15%), Positives = 123/379 (32%), Gaps = 22/379 (5%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+Y+ +   +           K    ++  A+K  +   +   L     G    S+ EV
Sbjct: 12  TPFYIYNFDFIKERFLNLKEAFKARKSQIFYAVKANSNLSLLQMLANLDSGFDCVSIGEV 71

Query: 64  MLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
                         ++   K  +    A+  +   I   + +++   +  A++L+ K  +
Sbjct: 72  KRALKAGAKAYKIIFSGVGKTKEELRQALEYDILYINLESEAEMMLLESVAKELNLKARI 131

Query: 121 --RINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCE--- 168
             R+NP+V              ++ G +             S      G+ FH   +   
Sbjct: 132 SIRVNPNVDAKTHPYISTGLNENKFGVEIDIARKMYLYAKNSSFLEPVGVHFHIGSQLLD 191

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK 224
                  + ++  + +E       +++  +GGG+    +       + D+ Q +      
Sbjct: 192 ISPIHEAAGIVAKLVRELKALQIDLKFFDIGGGLGVAYEKDECESDLYDYAQGILAQLHG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I +EPG  +V  +     +VL       K  V+VD ++   +   L       I P
Sbjct: 252 LDLTIGMEPGRYLVAKSGEFVCSVLYEKQNKTKRFVVVDGAMNDLIRPSLYEAYHEIILP 311

Query: 284 NTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                     V G  C +GD F +       + GD +  ++   Y  +  + +N  N   
Sbjct: 312 YNQAQESLCDVVGGICESGDFFAKARSLPSTQSGDIMVIKNTGAYGFSMSSNYNTRNKVC 371

Query: 342 IAVKNVDGTIKAIREFSYN 360
                        +  ++ 
Sbjct: 372 ELALEEGQVRLIRQRENFE 390


>gi|86151380|ref|ZP_01069595.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|86153859|ref|ZP_01072062.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|157414611|ref|YP_001481867.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni
           81116]
 gi|315123882|ref|YP_004065886.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|85841727|gb|EAQ58974.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|85842820|gb|EAQ60032.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|157385575|gb|ABV51890.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni
           81116]
 gi|307747251|gb|ADN90521.1| Diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni
           M1]
 gi|315017604|gb|ADT65697.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315931609|gb|EFV10575.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni
           327]
          Length = 402

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 56/379 (14%), Positives = 123/379 (32%), Gaps = 22/379 (5%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+Y+ +   +           K    ++  A+K  +   +   L     G    S+ EV
Sbjct: 12  TPFYIYNFDFIKERFLNLKEAFKARKSQIFYAVKANSNLSLLQMLANLDSGFDCVSIGEV 71

Query: 64  MLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
                         ++   K  +    A+  +   I   + +++   +  A++L+ K  +
Sbjct: 72  KRALKAGAKAYKIIFSGVGKTKEELRQALEYDILYINLESEAEMMLLESVAKELNLKARI 131

Query: 121 --RINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCE--- 168
             R+NP+V              ++ G +             S      G+ FH   +   
Sbjct: 132 SIRVNPNVDAKTHPYISTGLNENKFGVEIDIARKMYLYAKNSSFLEPVGVHFHIGSQLLD 191

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK 224
                  + ++  + +E       +++  +GGG+    +       + ++ Q +      
Sbjct: 192 ISPIHEAAGIVAKLVRELKALQIDLKFFDIGGGLGVAYEKDECEPDLYNYAQGILAQLHG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I +EPG  +V  +     +VL       K  V+VD ++   +   L       I P
Sbjct: 252 LDLTIGMEPGRYLVAKSGEFVCSVLYEKQNKTKRFVVVDGAMNDLIRPSLYEAYHEIILP 311

Query: 284 NTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                     V G  C +GD F +       + GD +  ++   Y  +  + +N  N   
Sbjct: 312 YNQAQESLCDVVGGICESGDFFAKARSLPSTQSGDIMVIKNTGAYGFSMSSNYNTRNKVC 371

Query: 342 IAVKNVDGTIKAIREFSYN 360
                        +  ++ 
Sbjct: 372 ELALEEGQVRLIRQRENFE 390


>gi|306819981|ref|ZP_07453632.1| diaminopimelate decarboxylase [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
 gi|304552017|gb|EFM39957.1| diaminopimelate decarboxylase [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
          Length = 427

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 73/397 (18%), Positives = 137/397 (34%), Gaps = 34/397 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+     ++  +++     K     V++  A K F    M   L ++       S 
Sbjct: 25  GTPLYVYSYDSIVAEMNSLKKDFKQKYENVRIAYASKAFNCIAMCQILKKHSLCLDVVSG 84

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKF--KDKAQKLH 115
            E+       F  E   +N   K  E   +        II + + +++      KA+   
Sbjct: 85  GELYTAIKANFPAEHIEFNGNNKSTEELEMAIDYGVGRIIIDGLFEIDIIEEICKAKDKK 144

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
             +  RINP V           +  S+ G    +          ++SE  N  GL FH  
Sbjct: 145 VNVLFRINPGVDSHTNEKISTGKIDSKFGIPTDEDVFFPLVQRALKSEYINFLGLHFHVG 204

Query: 167 CE----NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIH--------FTDKDYPVKDF 214
            +    +   L    +L+  EK    F  +++ I+LGGG               +     
Sbjct: 205 SQLFDNSSHILATDVVLELAEKIREKFDFELKEINLGGGFGVVYTDEKKMPYSYFLDPLM 264

Query: 215 CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDY 272
            +  + +  K    + +EPG +++  +      V  I +       V     +  ++   
Sbjct: 265 EKIEQYYKGKKRPAVVIEPGRSLIGESGFQLYKVGQIKDIKDVRKYVSVDGGMTDNIRPT 324

Query: 273 LLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
           L   + + +  N        +  +CG+ C +GDI  +      V+  D I+      Y  
Sbjct: 325 LYDAKYSAMIVNKADKVKEESVTICGKCCESGDILIKDISLPKVEKDDIIAIFTTGAYGY 384

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              N +N   +P + +   +   + IR  SY+D   N
Sbjct: 385 AMANNYNKTRIPAVVMIKDNDVFEIIRRQSYDDIIKN 421


>gi|329929809|ref|ZP_08283485.1| diaminopimelate decarboxylase [Paenibacillus sp. HGF5]
 gi|328935787|gb|EGG32248.1| diaminopimelate decarboxylase [Paenibacillus sp. HGF5]
          Length = 444

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 65/400 (16%), Positives = 133/400 (33%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++D+Q + N     +   K +G   ++  A K F    M    ++        S 
Sbjct: 30  GTPLYIVDEQSVRNRCREYIEAFKASGLKFQVAYASKAFCVMAMCRLADEEGMSLDVVSD 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK- 116
            E+       F  +   ++   K  E   +   +     + + V +L+  +  A + ++ 
Sbjct: 90  GELYTALQAGFPADRIHFHGNNKTPEEIEMALDAEIGCFVVDNVIELHMLQAIAAEKNRK 149

Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I LR+ P V           +  S+ G         E  +        ++ G+  H  
Sbjct: 150 VNILLRVTPGVEAHTHEYISTGQTDSKFGFDIGNGSAYEAVQLAEAQANIHLMGIHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK----DFCQRL 218
            +      F   ++ + +             + ++LGGG      D         + + +
Sbjct: 210 SQIFEVEGFQMAVQRVAEFAASVKEGLGVVFKVVNLGGGFGIRYVDGDTPLQVSQYVKAI 269

Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            +  + +         +I++EPG +IV +  T   TV    +       V     +  + 
Sbjct: 270 TDAVKNHFAGLGSELPEIWVEPGRSIVGDAGTTLYTVGTSKDIPGVRKYVAVDGGMTDNP 329

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +     A         T  + G+ C +GD+         V+ GD ++      
Sbjct: 330 RPALYESKYEALLANRAKEEPEETVSIAGKCCESGDMLIWDLELPKVETGDLLAVSCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           YN +  + +N I  P +       +   +R  S  D  +N
Sbjct: 390 YNYSMASNYNRIRKPAVVFVKDGQSNLVVRRESLADIISN 429


>gi|261405994|ref|YP_003242235.1| diaminopimelate decarboxylase [Paenibacillus sp. Y412MC10]
 gi|261282457|gb|ACX64428.1| diaminopimelate decarboxylase [Paenibacillus sp. Y412MC10]
          Length = 444

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 65/400 (16%), Positives = 133/400 (33%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++D+Q + N     +   K +G   ++  A K F    M    ++        S 
Sbjct: 30  GTPLYIVDEQSVRNRCREYIEAFKASGLKFQVAYASKAFCVMAMCRLADEEGMSLDVVSD 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK- 116
            E+       F  +   ++   K  E   +   +     + + V +L+  +  A + ++ 
Sbjct: 90  GELYTALQAGFPADRIHFHGNNKTPEEIEMALDAEIGCFVVDNVIELHMLQAIAAEKNRK 149

Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I LR+ P V           +  S+ G         E  +        ++ G+  H  
Sbjct: 150 VNILLRVTPGVEAHTHEYISTGQTDSKFGFDIGNGSAYEAVQLAEAQANIHLMGIHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK----DFCQRL 218
            +      F   ++ + +             + ++LGGG      D         + + +
Sbjct: 210 SQIFEVEGFQMAVQRVAEFAASVKEGLGVVFKVVNLGGGFGIRYVDGDTPLQVSQYVKAI 269

Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            +  + +         +I++EPG +IV +  T   TV    +       V     +  + 
Sbjct: 270 TDAVKNHFAGLGSELPEIWVEPGRSIVGDAGTTLYTVGTSKDIPGVRKYVAVDGGMTDNP 329

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +     A         T  + G+ C +GD+         V+ GD ++      
Sbjct: 330 RPALYESKYEALLANRAKEEPEETVSIAGKCCESGDMLIWDLELPKVETGDLLAVSCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           YN +  + +N I  P +       +   +R  S  D  +N
Sbjct: 390 YNYSMASNYNRIRKPAVVFVKDGQSNLVVRRESLADIISN 429


>gi|302521927|ref|ZP_07274269.1| diaminopimelate decarboxylase [Streptomyces sp. SPB78]
 gi|318060725|ref|ZP_07979448.1| diaminopimelate decarboxylase [Streptomyces sp. SA3_actG]
 gi|318075515|ref|ZP_07982847.1| diaminopimelate decarboxylase [Streptomyces sp. SA3_actF]
 gi|302430822|gb|EFL02638.1| diaminopimelate decarboxylase [Streptomyces sp. SPB78]
          Length = 465

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 60/398 (15%), Positives = 113/398 (28%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y +D++                G  +  A K F +  +   L++        S  E
Sbjct: 65  GTPAYFLDEEDFRARCRDWRSAFGE-GADVFYAGKAFLSRAVVRWLHEEGLNLDVCSGGE 123

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           ++            A++   K               I+ ++  +L +    AQ L +   
Sbjct: 124 LLTALDAGMPAARIAFHGNNKTAAEIERAVAAGVGRIVVDSFQELVRVAHTAQALGRVQR 183

Query: 120 --LRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
             +R+   V               + G         E  +  +  +   + G+  H   +
Sbjct: 184 VQIRVTVGVEAHTHEFIATAHEDQKFGLALAGGQAAEAVRRALTLDGIELVGIHSHIGSQ 243

Query: 169 NKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F    + +             ++  I LGGG+               + +    
Sbjct: 244 IFDMAGFEVSARRVVGLLAEIRDEHGVELPEIDLGGGLGIAYTSDDDPREPHEIAKALGD 303

Query: 225 YSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271
              +             +EPG AIV  T      V  I      +  V VD  +  ++  
Sbjct: 304 IVTRECESAGLAVPRISVEPGRAIVGPTAFTLYEVGTIKPLEGLRTYVSVDGGMSDNIRT 363

Query: 272 YLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326
            L   E     A+   +  P    V G+ C +GDI     F    +  GD ++      Y
Sbjct: 364 ALYDAEYSVALASRTSDAAPMLVRVVGKHCESGDIVVRDAFLPADLAPGDLLAVPATGAY 423

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N    P +           +R  +  D   
Sbjct: 424 CRSMASNYNHALRPPVVAVRDGQARVVVRRETEEDLLR 461


>gi|220929933|ref|YP_002506842.1| diaminopimelate decarboxylase [Clostridium cellulolyticum H10]
 gi|220000261|gb|ACL76862.1| diaminopimelate decarboxylase [Clostridium cellulolyticum H10]
          Length = 416

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 59/392 (15%), Positives = 112/392 (28%), Gaps = 32/392 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+ +++ L         + +        ++K  +   +   + +      + S  E
Sbjct: 25  GSPLYVYNEKILRQKCRDMKNLVEYKNFVPNYSIKANSNLSLIKIVKEEGLRADAMSAGE 84

Query: 63  V-MLGHEKFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           + +L H  F  E   +      + E+   + N   +  +++SQL            K  +
Sbjct: 85  IQLLLHAGFEPEELFFVPNNVSESELKYAVDNGVLVSVDSLSQLELLGKI--NTGGKAAV 142

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKC------KDKIESEIKNVNGLMFHNNCENKSFLC 174
           R NP V              ++ G         K+        + G+  H          
Sbjct: 143 RFNPGVGAGHHEKVVTAGKKTKFGVNIDCVDQVKEIAGKYNMKICGVNQHIGS-LFMEGD 201

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR----------LKEFSEK 224
                             I+++ +GGG          +               L+++++K
Sbjct: 202 SYIEGVKSLLSVAEQFEDIDFVDMGGGFGIPYNKQEGQKPLDLASFKEKLTQVLEQWTDK 261

Query: 225 YSVQIYL--EPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATI 281
           Y  +I    EPG  IV  +  +   V           V  D          +        
Sbjct: 262 YGKKILFKTEPGRYIVAESGVILGNVYTTKANYGNKYVGTDIGFNVLARPVMYDSHHDIE 321

Query: 282 YPNTGP-------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
               G            V G  C +GDI  +      +K GD +   D   Y     + +
Sbjct: 322 VYRNGKPLNEAETEEVTVVGNICESGDIIAKNRKLPVIKEGDILGIMDAGAYGFAMSSNY 381

Query: 335 NGINMPTIAVKNVDGT-IKAIREFSYNDYYNN 365
           N    P   +   DG      R  ++ D   N
Sbjct: 382 NMRLRPAEVLIKEDGEPTLIRRRDTFEDLIAN 413


>gi|146299915|ref|YP_001194506.1| diaminopimelate decarboxylase [Flavobacterium johnsoniae UW101]
 gi|146154333|gb|ABQ05187.1| diaminopimelate decarboxylase [Flavobacterium johnsoniae UW101]
          Length = 407

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 63/386 (16%), Positives = 119/386 (30%), Gaps = 27/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            +P Y+ D +K+ +  +           +++  A+K  +   +   L     G  + S+ 
Sbjct: 14  GSPLYVYDAEKIQSQYNRLTKAFSKVENLRVNYAMKALSNVAILQLLKNMGSGLDTVSIQ 73

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLHKKIG 119
           EV+LG    +  E   +       E    ++     I  + +S L +F  K    H  + 
Sbjct: 74  EVLLGLHAGYEPERIFFTPNGVSLEEIEEVAAMGVQINIDNLSILEQFGTK--HPHIPVC 131

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFL 173
           +RINP V              S+ G                  ++ G+  H   +     
Sbjct: 132 IRINPHVMAGGNANISVGHIDSKFGISVHQIPHILRIVENTKMSIVGIHMHTGSDILDIE 191

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI---- 229
            F    + I  +       ++++  G G     K   ++   + L +   K         
Sbjct: 192 VFLYAAE-ILFDTAKHFKDLQFLDFGSGFKVPYKKDDIETDIEELGKKLSKRFNAFCAEY 250

Query: 230 ------YLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLY--QESAT 280
                   EPG+ +V+        V  + +        VDS     +   L         
Sbjct: 251 GRDLTLIFEPGKFLVSEAGHFLVKVNVVKQTTSTVFAGVDSGFNHLIRPMLYGSSHHIEN 310

Query: 281 IYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
           I    G      V G  C   D F      + +  GD +SF +   Y  +  + +N    
Sbjct: 311 ISNPKGKERFYSVVGYICET-DTFANNRRIQEITEGDILSFRNAGAYCFSMSSNYNSRYK 369

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365
           P   +      I   +  ++ D   N
Sbjct: 370 PAEVLWMNGQGILIRQAETFEDLLKN 395


>gi|295692736|ref|YP_003601346.1| diaminopimelate decarboxylase [Lactobacillus crispatus ST1]
 gi|295030842|emb|CBL50321.1| Diaminopimelate decarboxylase [Lactobacillus crispatus ST1]
          Length = 436

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 60/398 (15%), Positives = 122/398 (30%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D  ++   +     + +       +  A K FAA  ++  + +    T   S 
Sbjct: 31  GTPLVVYDVDQIRRQIRAFKKVFEEENMAYAVSYASKAFAAIAIYQVIAEEGAYTDVVSA 90

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F  E  +++   K      +   ++   II +   ++             
Sbjct: 91  GELFTAIKANFPMERVSFHGNNKSLTELEMAVKNHVGKIIIDNFHEIQLLAQVLKKYDAT 150

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNN 166
             + LRI P +S          +  S+ G   +           + +    + G+  H  
Sbjct: 151 ISVMLRIAPGISAHTHEYDQTGQIDSKFGFDLESGQAEKALKQVLANPRMKMLGIHAHIG 210

Query: 167 CENKSFLCFSAMLKNIE----KEFGHFITQIEWISLGGGIHFTDKDYPVK--------DF 214
            +  +   F    + +          +    + I++GGG                     
Sbjct: 211 SQIFALNGFEMAAQKLMVVAQDWREKYGYLAQVINVGGGFGIKYTQEDHPLRPEEFVKTI 270

Query: 215 CQRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            + +K  +EK +     I +EPG +IV        TV    +       +     +  ++
Sbjct: 271 VKVIKTEAEKMNYPLPEIDIEPGRSIVGPAGYNLYTVGSRKDIPGYRSYITVDGGMGDNI 330

Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +  T+              + G+ C +GDI  E      VK GD ++  D   
Sbjct: 331 RPALYQAKYETVLATDPQAPLTEHVRIAGKYCESGDILAEDQALPQVKAGDLLAMLDTGA 390

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
           Y  +  + +N  + P +           I+  S  D  
Sbjct: 391 YGYSMASNYNRNSRPAVVFAENGKAKLVIKRESLEDLV 428


>gi|289435300|ref|YP_003465172.1| hypothetical protein lse_1939 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171544|emb|CBH28090.1| lysA [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 436

 Score =  216 bits (550), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 58/404 (14%), Positives = 126/404 (31%), Gaps = 39/404 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   + +         +  GVK  +  A K F+A  ++  + +        S 
Sbjct: 32  GTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSG 91

Query: 61  YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E   ++   K  +    A+       + +   +++  +D   + ++K
Sbjct: 92  GELYTAIKAGFPAERIHFHGNNKSVEEIHMALDYGIGCFVIDNYYEISLLEDILIERNEK 151

Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHN 165
             + +R+ P +           +  S+ G    +             S   ++ GL  H 
Sbjct: 152 ASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAESAIKQVLHASAAFDLIGLHCHI 211

Query: 166 NCENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK-DFCQRLKE 220
             +      F    + I  +   +        + ++LGGG            +  + +++
Sbjct: 212 GSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQ 271

Query: 221 FSEKYS----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268
             E+             +I++EPG ++V    T    V    E       V     +  +
Sbjct: 272 IMEEVRDVANTNDIAIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYVAVDGGMSDN 331

Query: 269 VPDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
           +   L       +           T  + G+ C +GD+            G+ ++     
Sbjct: 332 IRPALYDAHYDAVLAANPEKVPEETVAIAGKCCESGDMLIWDLPLPKSDAGEILAVFCTG 391

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367
            Y     + +N I  P +           +   +Y +   N LS
Sbjct: 392 AYGYAMASNYNRIPRPPVVFVEDGVDKLVVARETYENLVQNDLS 435


>gi|167769427|ref|ZP_02441480.1| hypothetical protein ANACOL_00757 [Anaerotruncus colihominis DSM
           17241]
 gi|167668395|gb|EDS12525.1| hypothetical protein ANACOL_00757 [Anaerotruncus colihominis DSM
           17241]
          Length = 435

 Score =  216 bits (550), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 59/401 (14%), Positives = 114/401 (28%), Gaps = 38/401 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP Y++D+ ++     +     +        +  A K F          +   G    S
Sbjct: 32  GTPLYVMDEDEIRRACASYRGSIERYYGGRGLVTYASKAFCCKAACKIAAEEGLGLDVVS 91

Query: 60  LYEVMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKA--QKL 114
             E+       F  E   ++   K  +   +A+      I+ +   +L      A  +  
Sbjct: 92  GGELYTAISANFPAERIFFHGNNKTVQELTEALAYGVGQIVVDNFDELETLNQLALSRGE 151

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHN 165
              I  RI P +           +  S+ G   +           +  +   + G+  H 
Sbjct: 152 PANILFRIKPGIDAHTHDFVRTGQIDSKFGLALETGEAMRAVQTALSMQGVRLRGVHCHI 211

Query: 166 NCENKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEF 221
             +      F    + +             ++E + LGGG               R  + 
Sbjct: 212 GSQIFDIEPFEHAAEVMLGFIADVRDQTGCELEILDLGGGFGIKYLPEHDPVEYDRYMQR 271

Query: 222 SEK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI------VDSS 264
             +            +  I +EPG +I         T   + E             +  +
Sbjct: 272 VARTVQRVSAARGVKTPFIVIEPGRSIAGPAGVTLYTAGAVKEIPGVRTYVSIDGGMCDN 331

Query: 265 VEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
               +         A         T  + G+ C +GD+ GE    + V  GD I+     
Sbjct: 332 PRYILYRSEYEAMVANKASQPKTRTVTLAGKCCESGDLIGEGMQIQDVHPGDIIAVLATG 391

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            YN    + +N I  P + +         ++  +Y D   N
Sbjct: 392 AYNYAMSSNYNRIPRPPVVMLRGGQARVVVKRETYEDLVRN 432


>gi|228996629|ref|ZP_04156268.1| Diaminopimelate decarboxylase [Bacillus mycoides Rock3-17]
 gi|229004278|ref|ZP_04162079.1| Diaminopimelate decarboxylase [Bacillus mycoides Rock1-4]
 gi|228757139|gb|EEM06383.1| Diaminopimelate decarboxylase [Bacillus mycoides Rock1-4]
 gi|228763261|gb|EEM12169.1| Diaminopimelate decarboxylase [Bacillus mycoides Rock3-17]
          Length = 449

 Score =  216 bits (550), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 60/400 (15%), Positives = 123/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D+  +           + +G   ++  A K F    M     +        S 
Sbjct: 41  GTPLYVYDEASIREKCRAFHRAFQESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 100

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115
            E+       F      ++   K  E    A+ ++    + +   ++    D AQ+    
Sbjct: 101 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQADVGCFVVDNFFEMEILHDLAQQYGKI 160

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G         +  +  +E    NV G+  H  
Sbjct: 161 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSAGQAMQAIRIALEKSNYNVLGIHSHIG 220

Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPV--------KDF 214
            +      F   ++ +              +  +++GGG      +              
Sbjct: 221 SQIFETAGFVRAVEVLHNFLEEIREQTGYVVTVLNVGGGFGIRYTEADTPLTLETYVHAV 280

Query: 215 CQRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
              ++E   + +     I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 281 TDAVREQFTRNNYPLPEIWIEPGRSIVGDAGTTIYTVGAVKDIPGIRKYVSVDGGMTDNL 340

Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +  N G         + G+ C +GD+         V   D ++      
Sbjct: 341 RPALYGARYEAMLANRGKEEAEEVVSIAGKCCESGDMLIWDIELPQVATADLLAISCTGA 400

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 401 YGYSMANNYNRIRRPAVVFAKGGASQIVVERETYENIIGN 440


>gi|194689552|gb|ACF78860.1| unknown [Zea mays]
          Length = 439

 Score =  216 bits (550), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 64/386 (16%), Positives = 117/386 (30%), Gaps = 27/386 (6%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           +P+YL  K ++L N        +     +  A+K      +   L +   G    S  E+
Sbjct: 45  SPFYLYSKLQILRNFAAYRDALQGLRSIVGYAVKANNNLPVLRVLRELGCGAVLVSGNEL 104

Query: 64  MLGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIG 119
            L     F      +N       ++     +   +  ++   L       +A      + 
Sbjct: 105 RLALQAGFDPARCIFNGNGKTLEDLKLAAESGVFVNVDSEFDLENIVRAARATGKKVPVL 164

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLMFHNNCENKS 171
           LRINP V              S+ G + +            S    + G+  H       
Sbjct: 165 LRINPDVDPQVHPYVATGNKTSKFGIRNEKLQWFLNSIKSYSNEIKLVGVHCHLGSTITK 224

Query: 172 FLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEFSE 223
              F      +            ++E++++GGG+               D    ++E   
Sbjct: 225 VDIFRDAAVLMVNYVDEIRAQGFKLEYLNIGGGLGIDYHHTDAVLPTPMDLINTVRELVL 284

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-HVPDYLLYQESATIY 282
              + + +EPG +++ NT      V  +  N     IV     A  +   L         
Sbjct: 285 SQDLTLIIEPGRSLIANTCCFVNRVTGVKSNGTKNFIVVDGSMAELIRPSLYGAYQHIEL 344

Query: 283 PNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
            +         T  + G  C + D  G+         G  +   D   Y ++  + +N  
Sbjct: 345 VSPPTPGAEVATFDIVGPVCESADFLGKDRELPTPDEGAGLVVHDAGAYCMSMASTYNLK 404

Query: 338 NMPTIAVKNVDGTIKAIR-EFSYNDY 362
             P       DG+I  IR E   +DY
Sbjct: 405 LRPPEYWVEEDGSIVKIRHEEKLDDY 430


>gi|308183818|ref|YP_003927951.1| carboxynorspermidine decarboxylase [Helicobacter pylori SJM180]
 gi|308059738|gb|ADO01634.1| carboxynorspermidine decarboxylase [Helicobacter pylori SJM180]
          Length = 405

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 137/400 (34%), Positives = 209/400 (52%), Gaps = 38/400 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y+++ ++L  N      + + +G K+LLALK +A W  F  L Q ++G  +S LY
Sbjct: 7   IPTPCYVLESERLEKNAKILEIVCQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66

Query: 62  EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112
           E  L  E+FGG     E   Y+ A+K+ E+ A+L    +IIFN+  Q     ++  DK +
Sbjct: 67  EAKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNK 126

Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162
           +L        K+GLRINP  S     + +P    SRLG       +   ++    V+GL 
Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSGFEKGVKEHGLEGVSGLH 186

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
           FH +CE          L+++E+ F  ++  + W++ GGG H T  DY V    Q +K+F 
Sbjct: 187 FHTHCEQN-ADALCRTLEHVERHFKPYLENMAWVNFGGGHHITKSDYDVNLLIQTIKDFK 245

Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
           E+Y   ++ LEPGEAI      L  +V+DI +N + + I+D+S  AH+PD L      +I
Sbjct: 246 ERYHNIEVVLEPGEAIGWQCGFLIASVIDIVQNDQEIAILDASFSAHMPDCLEMPYRPSI 305

Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
                             N G ++  + G +CLAGD  G F FEKP+K GD+I F+D+  
Sbjct: 306 LKVSVENDEEIIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFEKPLKRGDKIVFQDMLH 365

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y I + N FNG+ +P++A  +  G  K ++ FSY DY N 
Sbjct: 366 YTIVKNNSFNGVPLPSLAKLDQQG-FKILKNFSYEDYKNR 404


>gi|228990529|ref|ZP_04150494.1| Diaminopimelate decarboxylase [Bacillus pseudomycoides DSM 12442]
 gi|228769055|gb|EEM17653.1| Diaminopimelate decarboxylase [Bacillus pseudomycoides DSM 12442]
          Length = 449

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 60/400 (15%), Positives = 123/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D+  +           + +G   ++  A K F    M     +        S 
Sbjct: 41  GTPLYVYDEASIREKCRAFHRAFQESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 100

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115
            E+       F      ++   K  E    A+ ++    + +   ++    D AQ+    
Sbjct: 101 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQADVGCFVVDNFFEMEILHDLAQQYGKI 160

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G         +  +  +E    NV G+  H  
Sbjct: 161 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSAGQAMQAIRIALEKSNYNVLGIHSHIG 220

Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPV--------KDF 214
            +      F   ++ +              +  +++GGG      +              
Sbjct: 221 SQIFETAGFVRAVEVLHNFLEEIREQTGYVVTVLNVGGGFGIRYTEADRPLTLETYVHAV 280

Query: 215 CQRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
              ++E   + +     I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 281 TDAVREQFTRNNYPLPEIWIEPGRSIVGDAGTTIYTVGAVKDIPGIRKYVSVDGGMTDNL 340

Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +  N G         + G+ C +GD+         V   D ++      
Sbjct: 341 RPALYGARYEAMLANRGKEEAEEVVSIAGKCCESGDMLIWDIELPQVATADLLAISCTGA 400

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 401 YGYSMANNYNRIRRPAVVFAKGGASQIVVERETYENIIGN 440


>gi|228475964|ref|ZP_04060672.1| diaminopimelate decarboxylase [Staphylococcus hominis SK119]
 gi|228269787|gb|EEK11267.1| diaminopimelate decarboxylase [Staphylococcus hominis SK119]
          Length = 421

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 65/394 (16%), Positives = 127/394 (32%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D+ ++ N +       + +G+K  +  A K F    M   + +        S 
Sbjct: 26  GTPTIVYDEDEIRNQMRRFHNAFQKSGLKYNISYASKAFTCIQMVKLVQEENLQLDVVSE 85

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    E  F      ++   K          S     + +++ ++      A      
Sbjct: 86  GELYTALEAKFDPSRIHFHGNNKTKREIQYALESGVGYFVIDSLEEIELIDRYASDTVNV 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168
           + +R+NP V           +  S+ G   +             S+  ++ G+ FH   +
Sbjct: 146 V-IRVNPGVEAHTHEFIQTGQEDSKFGLSIRHGLAIQAVEKVKASKHLHLKGIHFHVGSQ 204

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ--------RLKE 220
            +         K +         Q+E ++LGGG      +  V    +         +K 
Sbjct: 205 IEGTEAMIETAKIVLNWLNEHHIQVELLNLGGGFGIKYVEGDVSFPIEEGIAEITDAIKS 264

Query: 221 FSEKYSVQIY---LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLY 275
            SEK +  +    +EPG +IV         V  I +  +    V     +  H+   L  
Sbjct: 265 ESEKLNYDVPEIGIEPGRSIVGEAGITLYEVGTIKDIPEVNKYVSIDGGMSDHIRTALYG 324

Query: 276 QESATI---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331
            +   +          T  + G+ C +GDI          VK GD ++      Y+ +  
Sbjct: 325 AKYQALLVNRHEEADETVTIAGKLCESGDIIIRDAMLPSSVKRGDYLAILSTGAYHYSMA 384

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + +N +  P +         + I+  S      N
Sbjct: 385 SNYNQMQKPPVFFLKDGKAREVIKRQSLRQLIIN 418


>gi|257892663|ref|ZP_05672316.1| diaminopimelate decarboxylase [Enterococcus faecium 1,231,408]
 gi|257829042|gb|EEV55649.1| diaminopimelate decarboxylase [Enterococcus faecium 1,231,408]
          Length = 419

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 62/394 (15%), Positives = 130/394 (32%), Gaps = 33/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           KTP Y+ D++K+   + +       K+   K+L A K F    M   +++Y  G    S 
Sbjct: 19  KTPLYVYDEEKMRQTMLSFKRGFVSKHFDTKVLYASKAFQTIEMLRLVHEYGFGLDVVSG 78

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKA--QKLH 115
            E+    +  F  +   ++   K  E  +     +   ++ + + ++   ++ +      
Sbjct: 79  GEIYTALQADFPKDAIYFHGNNKTPEELSYALENELLHVVADNLMEVELLEELSQRYSKK 138

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
             + LR+N  V              S+ G   +            ES    + G   H  
Sbjct: 139 VDVMLRLNVGVEAHTHEYIVTAHIDSKFGMSYESKECQQALQLIKESSYLELEGFHAHIG 198

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226
            +      + A +  +      F   +  ++LGGG              +   +   +Y+
Sbjct: 199 SQIFDVTAWLAEIDKLTSYLTDFDQPLS-LNLGGGFGIRYTQNDQPIPIEEALKKLIEYT 257

Query: 227 -----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL 274
                       Q+ +EPG +IV    T   T+  I +         D  +  ++   L 
Sbjct: 258 EESLDKRKLTIRQLLIEPGRSIVGEAGTTLYTIGFIKKTPHKKYYFVDGGMTDNIRPALY 317

Query: 275 YQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                   A            + G+ C +GD+  +  +    K GD ++      Y  + 
Sbjct: 318 QAAYDCDLAEKLSEEKTEKVTIAGKMCESGDVVIKETYLPKAKSGDLLAVYSTGAYGYSM 377

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            + +N    P +   N   +   +R  +++D   
Sbjct: 378 SSNYNRATRPAVVFVNNGQSRLVVRRQAFSDLLR 411


>gi|15893897|ref|NP_347246.1| diaminopimelate decarboxilase, lisA [Clostridium acetobutylicum
           ATCC 824]
 gi|15023479|gb|AAK78586.1|AE007576_2 Diaminopimelate decarboxilase, lisA [Clostridium acetobutylicum
           ATCC 824]
 gi|325508024|gb|ADZ19660.1| Diaminopimelate decarboxilase, lisA [Clostridium acetobutylicum EA
           2018]
          Length = 431

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 67/399 (16%), Positives = 127/399 (31%), Gaps = 36/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ID++ +  N        K      ++  A K F    M   + +        S 
Sbjct: 29  GTPLYVIDEKLVRQNCKEYYENFKVKEKKNRVAYAGKAFLPIAMCQIIKEEGLSLDVVSG 88

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+       F  E   ++   K  +   +    N    + +   ++ K  + A+K+   
Sbjct: 89  GELYTAYKAGFNMENVLFHGNNKTIDEMEMGVRLNVGRFVADNFYEIEKVNEIAKKMGKV 148

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
           +K+ LRI P +           +  S+ G            K+ +  +   ++GL  H  
Sbjct: 149 QKVFLRITPGIEAHTHEYIKTGQIDSKFGFTLSNGDALKAVKEVLNFQNVELSGLHCHIG 208

Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            +             ML  I++       +I+ + LGGG      +       +      
Sbjct: 209 SQIFDIAPYLEETRVMLAFIKEIQKETNYEIKELDLGGGFGIYYTEVDKPRGAEEFCSAI 268

Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            K              ++ +EPG +I+ N  +   TV  I E       V     +  ++
Sbjct: 269 LKEAEESSKKLGVKLPKLIIEPGRSIIGNAGSTLYTVGSIKEIQHMRKYVSVDGGMTDNI 328

Query: 270 PDYLLYQESATIYPNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
              L   E      N          + G+ C +GDI         V+ GD +       Y
Sbjct: 329 RPSLYNAEYECEIANKFNASKEKVTISGKCCESGDILINDVNISEVESGDILVVSTTGAY 388

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
             +  N +N I    + + +        +  +Y    +N
Sbjct: 389 GYSMSNNYNKIPKAAVVLVSDGKERLICKRETYEHMLSN 427


>gi|313632593|gb|EFR99586.1| diaminopimelate decarboxylase [Listeria seeligeri FSL N1-067]
          Length = 436

 Score =  216 bits (549), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 58/404 (14%), Positives = 126/404 (31%), Gaps = 39/404 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   + +         +  GVK  +  A K F+A  ++  + +        S 
Sbjct: 32  GTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSG 91

Query: 61  YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E   ++   K  +    A+       + +   +++  +D   + ++K
Sbjct: 92  GELYTAIKAGFPAERIHFHGNNKSVEEIHMALDYGIGCFVIDNYYEISLLEDILIERNEK 151

Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHN 165
             + +R+ P +           +  S+ G    +             S   ++ GL  H 
Sbjct: 152 ASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEAAIKQVLHASAAFDLIGLHCHI 211

Query: 166 NCENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK-DFCQRLKE 220
             +      F    + I  +   +        + ++LGGG            +  + +++
Sbjct: 212 GSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQ 271

Query: 221 FSEKYS----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268
             E+             +I++EPG ++V    T    V    E       V     +  +
Sbjct: 272 IMEEVRDVANANDIAIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYVAVDGGMSDN 331

Query: 269 VPDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
           +   L       +           T  + G+ C +GD+            G+ ++     
Sbjct: 332 IRPALYDAHYDAVLAANPEKVPEETVAIAGKCCESGDMLIWDLPLPKSDAGEILAVFCTG 391

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367
            Y     + +N I  P +           +   +Y +   N LS
Sbjct: 392 AYGYAMASNYNRIPRPPVVFVEDGVDKLVVARETYENLVQNDLS 435


>gi|254300613|ref|ZP_04968058.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 406e]
 gi|157810592|gb|EDO87762.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 406e]
          Length = 423

 Score =  216 bits (549), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 56/388 (14%), Positives = 118/388 (30%), Gaps = 27/388 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++  +  L    +            + +A+K  +  G+ +   +   G    S  E
Sbjct: 28  GTPLFVYSRAALTAAYEAYAKACAGRRASIHVAVKANSNLGVLNVFARLGAGFDIVSGGE 87

Query: 63  VMLGHEKFG-GETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +       G      ++   K  D    A+ +        ++ +L++    A  L     
Sbjct: 88  LARVLAAGGRARDVVFSGVGKSADEMRVALEAGVKCFNVESIPELDRLNAVAASLGKRAP 147

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D   +           V G+  H   +  
Sbjct: 148 VSLRVNPDVDPKTHPYISTGLKANKFGIAFDDARATYRAAAALPNLEVVGIDCHIGSQIT 207

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               +   +    ++ +       QI  + +GGG+  T  D    D    ++    +   
Sbjct: 208 ELSPYLDAIDKLLDLVERIEADGVQIHHVDVGGGLGITYDDETPPDIGAYVRAVLARIDA 267

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                 +I+ EPG ++  N   L T V  + +   KN  IVD+++       +     A 
Sbjct: 268 RGHGQREIWFEPGRSLTGNAGILLTRVEFLKQGEEKNFAIVDAAMNDLARPAMYQAFHAI 327

Query: 281 I----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
           +      +       + G  C +GD  G       +  G  ++      Y     + +N 
Sbjct: 328 VPVAPRTDVAAAVYDIVGPVCESGDWLGRERSLA-IAPGGLLAIRSAGAYGFTMSSNYNT 386

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364
                  + +           +    + 
Sbjct: 387 RPRAAEVIVDGANAHLVRPRETVESLFE 414


>gi|328880398|emb|CCA53637.1| Diaminopimelate decarboxylase [Streptomyces venezuelae ATCC 10712]
          Length = 489

 Score =  216 bits (549), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 60/397 (15%), Positives = 124/397 (31%), Gaps = 36/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+ ++     T          ++  A K F    +   + +   G    S  E
Sbjct: 91  GTPAYVLDEAEVRERCRTYRNAF--PDAEIHYAAKAFLCRALVHWVEEEGLGLDVCSAGE 148

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL-HKKI 118
           + L     F  E    +   K  +    A+      I+ +T +++ +         H+K+
Sbjct: 149 LELAVTTGFPAERILLHGNAKSPQDLGTALRLGVGRIVIDTPAEIARIAAAVGSGGHQKV 208

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCEN 169
            +R+ P +S              + G   +D          ++     + G+  H   + 
Sbjct: 209 MVRVTPGISAGGHRKIRTGSDDQKFGLSLRDGHAQHAIARVLDQPQLELTGIHCHLGSQI 268

Query: 170 KSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEF 221
                +      ++  + +        +  + LGGG             +    ++++  
Sbjct: 269 TDVKPYLVAVRRLVGLMARVRDTHGVTLPELDLGGGHGIAHRPGEPALDLTTLARKVRAE 328

Query: 222 SEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYL 273
             +          ++ +EPG A+          VL +     +  V VD  +  +    L
Sbjct: 329 LAESCAAAGLPVPRLVIEPGRAVTGPAGVAVYRVLAVKRTPGRTFVAVDGGMSDNPRPAL 388

Query: 274 LYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNI 328
                A          GP    V GR C AGDI  E          GD ++      Y++
Sbjct: 389 YGVRYAPRLIGRHSLAGPERVTVVGRHCEAGDILAEDVPLPADTHPGDLLAVPVAGAYHL 448

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           +  + +N +  P +           +R  +  D    
Sbjct: 449 SMASSYNLVGRPPVVAVRDGRARLLVRRETLEDLRAR 485


>gi|257886456|ref|ZP_05666109.1| diaminopimelate decarboxylase [Enterococcus faecium 1,141,733]
 gi|257822510|gb|EEV49442.1| diaminopimelate decarboxylase [Enterococcus faecium 1,141,733]
          Length = 419

 Score =  216 bits (549), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 62/394 (15%), Positives = 129/394 (32%), Gaps = 33/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           KTP Y+ D++K+   + +       K+   K+L A K F    M   +++Y  G    S 
Sbjct: 19  KTPLYVYDEEKMRQTMLSFKRGFVSKHFDTKVLYASKAFQTIEMLRLVHEYGFGLDVVSG 78

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKA--QKLH 115
            E+    +  F  +   ++   K  E  +     +   ++ + + ++   ++ +      
Sbjct: 79  GEIYTALQADFPRDAIYFHGNNKTPEELSYAFENELLHVVADNLMEVELLEELSQRYSKK 138

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
             + LR+N  V              S+ G   +            ES    + G   H  
Sbjct: 139 VDVMLRLNVGVEAHTHEYIVTAHIDSKFGMSYESKECQQALQLIKESSYLELEGFHAHIG 198

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226
            +      + A +  +      F   +  ++LGGG              +   +   +Y+
Sbjct: 199 SQIFDVTAWLAEIDKLTSYLTDFDQPLS-LNLGGGFGIRYTQNDQPIPIEEALKKLIEYT 257

Query: 227 -----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL 274
                       Q+ +EPG +IV    T   T+  I +         D  +  ++   L 
Sbjct: 258 EESLDKRKLTIRQLLIEPGRSIVGEAGTTLYTIGFIKKTPHKKYYFVDGGMTDNIRPALY 317

Query: 275 YQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                   A            + G+ C +GD+  +  +    K GD ++      Y  + 
Sbjct: 318 QAAYDCDLAEKMSEEKTEKVTIAGKMCESGDVVIKETYLPKAKSGDLLAVYSTGAYGYSM 377

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            + +N    P +   N   +   +R   ++D   
Sbjct: 378 SSNYNRATRPAVVFVNNGQSRLVVRRQVFSDLLR 411


>gi|229144119|ref|ZP_04272534.1| Diaminopimelate decarboxylase [Bacillus cereus BDRD-ST24]
 gi|228639338|gb|EEK95753.1| Diaminopimelate decarboxylase [Bacillus cereus BDRD-ST24]
          Length = 438

 Score =  216 bits (549), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 60/400 (15%), Positives = 122/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 30  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+       F      ++   K  E    A+ +N    + +   +L    D A +    
Sbjct: 90  GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFFELEVLHDLAMQHGKF 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G    +          ++    NV G+  H  
Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIGLALQKSNYNVLGIHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F   ++ + +       Q    ++ +++GGG      +              
Sbjct: 210 SQIFETAGFVRAIEVLRQFLEEVREQTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +      E    +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 270 TSAVREQFTVCEYPLPEIWIEPGRSIVGDAGTTIYTVGSVKDIPGIRKYVSVDGGMTDNL 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +       + G+ C +GD+         V   D ++      
Sbjct: 330 RPALYNARYEAMLANRANDENEELVSIAGKCCESGDMLIWDIHLPKVAASDLLAVSCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGN 429


>gi|301065233|ref|YP_003787256.1| diaminopimelate decarboxylase [Lactobacillus casei str. Zhang]
 gi|300437640|gb|ADK17406.1| Diaminopimelate decarboxylase [Lactobacillus casei str. Zhang]
          Length = 448

 Score =  216 bits (549), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 64/400 (16%), Positives = 122/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           +TP Y+ D   +   +     + + A V   +  A K FA   M++            S 
Sbjct: 26  QTPLYVYDVGAIRQQIRAFKRVFEEADVSYAVSYASKAFATIAMYEVAKSEGAHVDVVSG 85

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDK--AQKLH 115
            E+       F     +++   K       A+ +   TII +   +L+   D   A    
Sbjct: 86  GELYTAQAADFPMAAVSFHGNNKSKAELTQALDAGVGTIIVDNFHELDLLDDLLGATVGQ 145

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           + + +R+ P +S          +  S+ G         E  K  +  +  N+ G+  H  
Sbjct: 146 QDVLIRVAPGISAHTHAYDQTGQTDSKFGFDLASGQADEAAKRILADDHLNLLGIHAHIG 205

Query: 167 CENKSFLCFSAMLKNIEK----EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---- 218
            +      F A+ + +          F    + +++GGG              +      
Sbjct: 206 SQIFEVAGFEAVTQKLLHVLNNWHQQFGFIPKVLNVGGGFGIAYTKQDDPLPPEAFVKAI 265

Query: 219 -------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
                   +        I++EPG +IV        TV    +    +  V VD  +  ++
Sbjct: 266 LATLKSQSQTLNWPLPAIWIEPGRSIVGPAGYSLYTVGSRKDVPGLRPYVAVDGGMGDNI 325

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       I              + G+ C +GDI  +         GD +   D   
Sbjct: 326 RPALYQATYTAILADQPNAAPAEHVHLVGKYCESGDILIDDAPLPTTTPGDVVVVFDTGA 385

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  + +N    P +           +   +  D   N
Sbjct: 386 YGYSMASNYNRNPRPAVVFVENGQAQLVVTRETDADLIKN 425


>gi|188588479|ref|YP_001922416.1| diaminopimelate decarboxylase [Clostridium botulinum E3 str. Alaska
           E43]
 gi|188498760|gb|ACD51896.1| diaminopimelate decarboxylase [Clostridium botulinum E3 str. Alaska
           E43]
          Length = 431

 Score =  216 bits (549), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 65/400 (16%), Positives = 124/400 (31%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++D+  +  N +      K      ++  A K F    M   +N+        S 
Sbjct: 29  GTPLYVMDEGLIRQNCNDYYRYFKCNNSLNRVAYAGKAFLTLEMCKIINEENLSLDVVSG 88

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F  +   ++   K  +     V       + +   +++     A      
Sbjct: 89  GELFTAYKSGFPLDKVMFHGNNKTLDEIELGVKLGVGRFVVDNYYEMDALNRIAASYNKV 148

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG-----EKCKDKIES----EIKNVNGLMFHNN 166
           +KI LRI P +           +  S+ G        +D I          ++GL  H  
Sbjct: 149 QKIFLRITPGIEAHTHEYIKTGQVDSKFGFAPVENMIEDAINKSIDLPNIELSGLHCHIG 208

Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK---------- 212
            +      +   ++ +              I+ + LGGG                     
Sbjct: 209 SQIFEIEPYEDAVEIMLGLIKKIQENTGYLIKELDLGGGFGIYYNRGDKPKTTKEYCEAI 268

Query: 213 -DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            +    +   + +    + +EPG +IV N+     T+  I +       V     +  ++
Sbjct: 269 LNKVDEVCSRTGQSKPSLIIEPGRSIVGNSGITLYTIGSIKDIPGVRKYVSVDGGMSDNI 328

Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L + E   +  N        T  +CG+ C +GDI          +  D +S      
Sbjct: 329 RPALYHAEYECMLANKVEKDLKETVTICGKCCESGDILLNNVNISAPQSNDILSVMTTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P + +   +      R  +Y D   N
Sbjct: 389 YGYSMSNNYNKIPKPPVVMVKDNKERLICRRETYEDLIQN 428


>gi|229074708|ref|ZP_04207729.1| Diaminopimelate decarboxylase [Bacillus cereus Rock4-18]
 gi|229096010|ref|ZP_04226985.1| Diaminopimelate decarboxylase [Bacillus cereus Rock3-29]
 gi|229102122|ref|ZP_04232833.1| Diaminopimelate decarboxylase [Bacillus cereus Rock3-28]
 gi|229114964|ref|ZP_04244376.1| Diaminopimelate decarboxylase [Bacillus cereus Rock1-3]
 gi|228668476|gb|EEL23906.1| Diaminopimelate decarboxylase [Bacillus cereus Rock1-3]
 gi|228681322|gb|EEL35488.1| Diaminopimelate decarboxylase [Bacillus cereus Rock3-28]
 gi|228687395|gb|EEL41298.1| Diaminopimelate decarboxylase [Bacillus cereus Rock3-29]
 gi|228708451|gb|EEL60603.1| Diaminopimelate decarboxylase [Bacillus cereus Rock4-18]
          Length = 449

 Score =  216 bits (549), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 62/400 (15%), Positives = 122/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 41  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 100

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+       F      ++   K  E    A+ +N    + +   +L    D A +    
Sbjct: 101 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFLELEVLHDLAMQHGKF 160

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G    +          ++    NV G+  H  
Sbjct: 161 VNILIRVTPGVEAHTHEYITTGQEDSKFGFGVSNGQAMQAIGLALQKSNYNVLGIHSHIG 220

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F   ++ + K       Q    ++ +++GGG      +              
Sbjct: 221 SQIFETAGFVRAIEVLRKFLEEVREQTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 280

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +      E    +I++EPG +IV +  T   TV  + E       V     +  ++
Sbjct: 281 TSAVREQFTVCEYPLPEIWVEPGRSIVGDAGTTIYTVGSVKEIPGIRKYVSVDGGMTDNL 340

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +       + G+ C +GD+         V   D ++      
Sbjct: 341 RPALYSARYEAMLANRGNDENEELVSIAGKCCESGDMLIWDINLPKVASSDLLAISCTGA 400

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 401 YGYSMANNYNRIRRPAVVFAKGGTSQIVVERETYENIIGN 440


>gi|86149204|ref|ZP_01067436.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88597409|ref|ZP_01100644.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|218561973|ref|YP_002343752.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|13124081|sp|Q9PII5|DCDA_CAMJE RecName: Full=Diaminopimelate decarboxylase; Short=DAP
           decarboxylase
 gi|85840562|gb|EAQ57819.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88190470|gb|EAQ94444.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|112359679|emb|CAL34465.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|284925586|gb|ADC27938.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni
           IA3902]
 gi|315928385|gb|EFV07699.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni
           DFVF1099]
 gi|315930531|gb|EFV09574.1| diaminopimelate decarboxylase [Campylobacter jejuni subsp. jejuni
           305]
          Length = 402

 Score =  216 bits (549), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 58/383 (15%), Positives = 124/383 (32%), Gaps = 22/383 (5%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+Y+ +   +           K    ++  A+K  +   +   L     G    S+ EV
Sbjct: 12  TPFYIYNFDFIKERFLNLKEAFKARKSQIFYAVKANSNLSLLQMLANLDSGFDCVSIGEV 71

Query: 64  MLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
                         ++   K  +    A+  +   I   + +++   +  A++L+ K  +
Sbjct: 72  KRALKAGAKAYKIIFSGVGKTKEELRQALEYDILYINLESEAEMMLLESVAKELNLKARI 131

Query: 121 --RINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCE--- 168
             R+NP+V              ++ G +             S      G+ FH   +   
Sbjct: 132 SIRVNPNVDAKTHPYISTGLNENKFGVEIDIARKMYLYAKNSSFLEPVGVHFHIGSQLLD 191

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSEK 224
                  +A++  + +E       +++  +GGG+    +       + D+ Q +      
Sbjct: 192 ISPIHEAAAIVAKLVRELKALQIDLKFFDIGGGLGVAYEKNECEPDLYDYAQGILAQLHG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I +EPG  +V  +     +VL       K  V+VD ++   +   L       I P
Sbjct: 252 LDLTIGMEPGRYLVAKSGEFVCSVLYEKQNKTKRFVVVDGAMNDLIRPSLYEAYHEIILP 311

Query: 284 NTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                     V G  C +GD F +       +  D +  ++   Y  +  + +N  N   
Sbjct: 312 YNQGEESLCDVVGGICESGDFFAKARSLPSTQSDDIMVIKNTGAYGFSMSSNYNTRNKVC 371

Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364
                        +  ++ D   
Sbjct: 372 ELALEEGQVRLIRQRENFEDQIA 394


>gi|239630911|ref|ZP_04673942.1| diaminopimelate decarboxylase [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|239527194|gb|EEQ66195.1| diaminopimelate decarboxylase [Lactobacillus paracasei subsp.
           paracasei 8700:2]
          Length = 448

 Score =  215 bits (548), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 64/400 (16%), Positives = 122/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           +TP Y+ D   +   +     + + A V   +  A K FA   M++            S 
Sbjct: 26  QTPLYVYDVGAIRQQIRAFKRVFEEADVSYAVSYASKAFATIAMYEVAKSEGAHVDVVSG 85

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDK--AQKLH 115
            E+       F     +++   K       A+ +   TII +   +L+   D   A    
Sbjct: 86  GELYTAQAADFPMAAVSFHGNNKSKAELTQALDAGVGTIIVDNFHELDLLDDLLGATVGQ 145

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           + + +R+ P +S          +  S+ G         E  K  +  +  N+ G+  H  
Sbjct: 146 QDVLIRVAPGISAHTHAYDQTGQTDSKFGFDLASGQSDEAAKRILADDHLNLLGIHAHIG 205

Query: 167 CENKSFLCFSAMLKNIEK----EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---- 218
            +      F A+ + +          F    + +++GGG              +      
Sbjct: 206 SQIFEVAGFEAVTQKLLHVLNNWHQQFGFIPKVLNVGGGFGIAYTKQDDPLPPEAFVKAI 265

Query: 219 -------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
                   +        I++EPG +IV        TV    +    +  V VD  +  ++
Sbjct: 266 LATLKSQSQTLNWPLPAIWIEPGRSIVGPAGYSLYTVGSRKDVPGLRPYVAVDGGMGDNI 325

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       I              + G+ C +GDI  +         GD +   D   
Sbjct: 326 RPALYQATYTAILADQPNAAPAEHVHLVGKYCESGDILIDDAPLPTTTPGDVVVVFDTGA 385

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  + +N    P +           +   +  D   N
Sbjct: 386 YGYSMASNYNRNPRPAVVFVENGQAQLVVTRETDADLIKN 425


>gi|208433995|ref|YP_002265661.1| carboxynorspermidine decarboxylase [Helicobacter pylori G27]
 gi|208431924|gb|ACI26795.1| carboxynorspermidine decarboxylase [Helicobacter pylori G27]
          Length = 405

 Score =  215 bits (548), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 136/400 (34%), Positives = 208/400 (52%), Gaps = 38/400 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y+++ ++L  N      + + +G K+LLALK +A W  F  L Q ++G  +S LY
Sbjct: 7   IPTPCYVLESERLEKNAKILEIVHQQSGAKVLLALKGYAFWREFGILRQRLNGCCASGLY 66

Query: 62  EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112
           E  L  E+FGG     E   Y+ A+K+ E+ A+L    +IIFN+  Q     ++  DK +
Sbjct: 67  EAKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNK 126

Query: 113 KLHK------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLM 162
           +L        K+GLRINP  S     + +P    SRLG       +   ++    V+GL 
Sbjct: 127 QLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSGFEKGVKEHGLEGVSGLH 186

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
           FH +CE          L+++E+ F  ++  + W++ GGG H T  DY V    Q +K+F 
Sbjct: 187 FHTHCEQN-ADALCRTLEHVERHFKPYLENMAWVNFGGGHHITKSDYDVNLLIQTIKDFK 245

Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
           E+Y   ++ LEPGEAI      L  +V+DI +N + + I+D+S  AH+PD L      +I
Sbjct: 246 ERYHNIEVILEPGEAIGWQCGFLIASVIDIVQNDQEIAILDASFSAHMPDCLEMPYRPSI 305

Query: 282 YP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
                             N G ++  + G +CLAGD  G F FE P+K GD+I F+D+  
Sbjct: 306 LKVSVENDKELIEVERGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGDKIVFQDMLH 365

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y I + N FNG+ +P++A  +  G  K ++ FSY DY N 
Sbjct: 366 YTIVKNNSFNGVPLPSLAKLDQQG-FKILKNFSYEDYKNR 404


>gi|298208274|ref|YP_003716453.1| diaminopimelate decarboxylase [Croceibacter atlanticus HTCC2559]
 gi|83848195|gb|EAP86065.1| diaminopimelate decarboxylase [Croceibacter atlanticus HTCC2559]
          Length = 406

 Score =  215 bits (548), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 63/385 (16%), Positives = 122/385 (31%), Gaps = 27/385 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            +P Y+ + + + +         K    V++  A+K  +   +   + +   G  + S+ 
Sbjct: 14  GSPVYVYNAETIESQYKRLTSAFKKVKQVRINYAVKALSNLAILQLMKRMGAGLDTVSIQ 73

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLS-NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           EV LG       +   Y       E    ++     I  + +S L +F  K       + 
Sbjct: 74  EVKLGLAAGVDPKKIIYTPNGVSMEEIEEVAALGVQINIDNLSVLEQFGTK--HPKIPVC 131

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFL 173
           +RINP V              S+ G                  N+NG+  H   +     
Sbjct: 132 IRINPHVMAGGNTNISVGHIDSKFGISIHQIPHILRIVELTRMNINGVHMHTGSDILDID 191

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ--------RLKEFSEKY 225
            F    + I  +       +E+I  G G     K+  ++   +        R KEF ++Y
Sbjct: 192 VFLYASE-ILFDTAKNFKDLEFIDFGSGFKVPYKEGDIETNIEEFGDKLSTRFKEFCKEY 250

Query: 226 SVQIYL--EPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIY 282
              + L  EPG+ +V+        V  + +        +DS     +   L   +   + 
Sbjct: 251 GKDLTLAFEPGKFLVSEAGKFLAKVNVVKQTTSTVFAQIDSGFNHLIRPMLYGSQHEIMN 310

Query: 283 PNTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            +          V G  C   D F        +K  D ++F +   Y  +  + +N    
Sbjct: 311 ISNPNGRQRFYSVVGYICET-DTFANNRRINEIKENDILAFSNAGAYCFSMASNYNSRFR 369

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
           P   +             +++D   
Sbjct: 370 PPEVLWYQGKAHLIRERETFDDLLK 394


>gi|186686026|ref|YP_001869222.1| diaminopimelate decarboxylase [Nostoc punctiforme PCC 73102]
 gi|186468478|gb|ACC84279.1| diaminopimelate decarboxylase [Nostoc punctiforme PCC 73102]
          Length = 465

 Score =  215 bits (548), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 58/398 (14%), Positives = 119/398 (29%), Gaps = 33/398 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P Y++D++ L +         K       ++L A K +    +         G    S
Sbjct: 61  GSPLYILDEETLRSACQQYRDAFKQYYKGESQVLYASKAWNCLAVCAIAASEGLGIDVVS 120

Query: 60  LYEVMLGH-EKFGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK-LHK 116
             E+          E    +       E+   + +  TI+ +   +L    + AQ     
Sbjct: 121 GGELYTALQAGVSPEKIYLHGNNKSREELILAIESGVTIVADNWYELRTLVEIAQPGQSI 180

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCEN 169
           +I LR+ P +              S+ G    D         +    +  G+  H   + 
Sbjct: 181 RIMLRLTPGIECHTHEYIRTGHLDSKFGFDPNDLDEVFTFVSQQSTLDCVGVHAHIGSQI 240

Query: 170 KSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTD-KDYPVKDFCQRLKEFSEKY 225
                   +   + +       +   I  +++GGG+     +        + +K   E  
Sbjct: 241 FERQPHQDLAAVMVQWLRDAGKYGLNITELNVGGGLGIKYTESDDPPSIEEWVKAICEVV 300

Query: 226 SVQIYLE----------PGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDYL 273
                +E          PG +++        TV    +   I+  V +D  +  +     
Sbjct: 301 QEACAVENLPLPKLLSEPGRSLIATACVTAYTVGSSKVIPEIRTYVAIDGGMSDNPRPIT 360

Query: 274 LYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
                  +  N        T  + G+ C +GDI  +       + GD +       YN +
Sbjct: 361 YQSVYRAVVANKMSSPVTQTVTIAGKHCESGDILIKNALLPKTEPGDILVVMGTGAYNYS 420

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367
             + +N +  P   V         ++  +Y D     S
Sbjct: 421 MASNYNRLPRPAAVVVANGEANLILQRETYQDLIRQDS 458


>gi|229043260|ref|ZP_04190982.1| Diaminopimelate decarboxylase [Bacillus cereus AH676]
 gi|228726121|gb|EEL77356.1| Diaminopimelate decarboxylase [Bacillus cereus AH676]
          Length = 438

 Score =  215 bits (548), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 60/400 (15%), Positives = 122/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 30  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+       F      ++   K  E    A+ +N    + +   +L    D A +    
Sbjct: 90  GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFFELEVLHDLAMQHGKF 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G    +          ++    NV G+  H  
Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIGLALQKSNYNVLGIHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F   ++ + +       Q    ++ +++GGG      +              
Sbjct: 210 SQIFETAGFVLAIEVLRQFLEEVREQTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +      E    +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 270 TSAVREQFTVCEYPLPEIWIEPGRSIVGDAGTTIYTVGSVKDIPGIRKYVSVDGGMTDNL 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +       + G+ C +GD+         V   D ++      
Sbjct: 330 RPALYNARYEAMLANRANDENEELVSIAGKCCESGDMLIWDIHLPKVAASDLLAVSCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGN 429


>gi|73669151|ref|YP_305166.1| diaminopimelate decarboxylase [Methanosarcina barkeri str. Fusaro]
 gi|72396313|gb|AAZ70586.1| diaminopimelate decarboxylase [Methanosarcina barkeri str. Fusaro]
          Length = 420

 Score =  215 bits (548), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 63/393 (16%), Positives = 125/393 (31%), Gaps = 31/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+++ D++ +L N +    + +   G K   A+K      +   L +   G   SSL 
Sbjct: 21  PTPFHIYDEKAILENAEKMKAVFREVPGFKEFFAVKALPNPFILKILREKGFGADCSSLP 80

Query: 62  EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E++L       GE   ++       E          I  + +S ++  +  A        
Sbjct: 81  ELILAEKAGITGEDIMFSSNDTPAEEFLKAKELGAYINLDDISHIDYLEKYAGLPDIVC- 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFHNNCENK----- 170
                     +          ++ G       E       + V     H    +      
Sbjct: 140 -FRYNPGPLKEGNAIIGRPEEAKYGFTRDQLFEGYRILRDRGVKRFGMHTMVASNELKAD 198

Query: 171 -SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK----- 224
                   + + I +       + E+++LGGGI    +        + + +  ++     
Sbjct: 199 YFVETARILFELIVEISKELNIKFEFVNLGGGIGIPYRPEEEPVSFEAVAKGVKEAYEAT 258

Query: 225 ------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                 Y ++++LE G  I      L T V  +    K+ V +DS +   +   +     
Sbjct: 259 ITASGLYPLKVFLECGRVITGPYGYLITQVRHLKHTYKDYVGMDSCMANLMRPGIYGAYH 318

Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        ++IGD ++  D   +  +    +
Sbjct: 319 HITVLGKENEAPVHKYDVTGSLCENNDKFAIDRHLPEIEIGDILAIHDTGAHGHSMGFNY 378

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       +   DG++  IR   +  DY+  L
Sbjct: 379 NGKLRSAELLLRKDGSVVQIRRAETIEDYFATL 411


>gi|229108976|ref|ZP_04238577.1| Diaminopimelate decarboxylase [Bacillus cereus Rock1-15]
 gi|296502092|ref|YP_003663792.1| diaminopimelate decarboxylase [Bacillus thuringiensis BMB171]
 gi|228674445|gb|EEL29688.1| Diaminopimelate decarboxylase [Bacillus cereus Rock1-15]
 gi|296323144|gb|ADH06072.1| diaminopimelate decarboxylase [Bacillus thuringiensis BMB171]
          Length = 438

 Score =  215 bits (548), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 60/400 (15%), Positives = 122/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 30  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+       F      ++   K  E    A+ +N    + +   +L    D A +    
Sbjct: 90  GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFFELEVLHDLAMQHGKF 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G    +          ++    NV G+  H  
Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIGFALQKSNYNVLGIHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F   ++ + +       Q    ++ +++GGG      +              
Sbjct: 210 SQIFETAGFVRAIEVLRQFLEEVREQTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +      E    +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 270 TSAVREQFTVCEYPLPEIWIEPGRSIVGDAGTTIYTVGSVKDIPGIRKYVSVDGGMTDNL 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +       + G+ C +GD+         V   D ++      
Sbjct: 330 RPALYNARYEAMLANRANDENEELVSIAGKCCESGDMLIWDIHLPKVAASDLLAVSCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGN 429


>gi|332312393|gb|EGJ25488.1| Diaminopimelate decarboxylase [Listeria monocytogenes str. Scott A]
          Length = 436

 Score =  215 bits (548), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 56/404 (13%), Positives = 126/404 (31%), Gaps = 39/404 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   + +         +  GVK  +  A K F+A  ++  + +        S 
Sbjct: 32  GTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSG 91

Query: 61  YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E   ++   K  +    A+       + +   +++  +D   + ++K
Sbjct: 92  GELYTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVIDNYYEISLLEDILIERNEK 151

Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHN 165
           +   +R+ P +           +  S+ G    +             S   ++ GL  H 
Sbjct: 152 VSVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHI 211

Query: 166 NCENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK-DFCQRLKE 220
             +      F    + I  +   +        + ++LGGG            +  + +++
Sbjct: 212 GSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQ 271

Query: 221 FSEK----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268
             ++             +I++EPG ++V    T    V    E       +     +  +
Sbjct: 272 IMDEVRDVANNNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDN 331

Query: 269 VPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
           +   L       +           T  + G+ C +GD+            G+ ++     
Sbjct: 332 IRPALYDAHYDAVLAANPEKVAEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTG 391

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367
            Y     + +N I  P +           +   +Y +   N LS
Sbjct: 392 AYGYAMASNYNRIPRPPVVFVENGVDKLIVARETYENLVQNDLS 435


>gi|300087798|ref|YP_003758320.1| diaminopimelate decarboxylase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527531|gb|ADJ25999.1| diaminopimelate decarboxylase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 437

 Score =  215 bits (548), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 59/398 (14%), Positives = 128/398 (32%), Gaps = 36/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK---NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP Y+  +Q   +       + K   ++ +K+L A K +    +   + +   G    S
Sbjct: 35  GTPLYIFSEQDFRDRCREYNRVFKADFSSDLKVLFAGKAWLNLSILKIIAEEGIGLDVVS 94

Query: 60  LYEVMLG-HEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
             E+ +     F  +    +   K        V      I+ +  S +++ +  A +   
Sbjct: 95  EGELGIASAAGFPLDRIYMHGNNKSDRELELAVEKGIGRIVVDNQSDISRLEAIASEKKD 154

Query: 117 KIGLRI--NPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNC 167
           +  + +  NP +              S+ G   ++        I+S++ ++ G  +H   
Sbjct: 155 RPAILVRINPGIDPHTHAKISTGNIDSKFGMGLEEARDVIDHIIKSDVLDLKGFHYHIGS 214

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEW----ISLGGGIHFTDKDYPVKD----FCQRLK 219
           +      F   L          +T +++    + +GGG                + + + 
Sbjct: 215 QIFEIQPFLDALTTALAFISDLMTDLDYATRELDIGGGYAIPYLSEQNPPGIGEYAKAIS 274

Query: 220 EFSEKYSV-------QIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVP 270
           +  +            + +EPG +++ ++T    TV  I      ++ V VD  +  ++ 
Sbjct: 275 DHFDSECQRLKLQKPCVTIEPGRSLIASSTVALYTVGVIKRISGIRDYVCVDGGMADNIR 334

Query: 271 DYLLYQESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
             L   +      N           V GR C +GDI          K GD +       Y
Sbjct: 335 PTLYGAQYEPSLANRMNDSNVGKYTVAGRYCESGDILATDVSLPEPKTGDLLVMPGAGAY 394

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            +   + +N    P +   +        R  +  D   
Sbjct: 395 CLPMASNYNASFRPAVVKVHQGKATLIRRRETMEDLIR 432


>gi|328466300|gb|EGF37457.1| diaminopimelate decarboxylase [Listeria monocytogenes 1816]
          Length = 436

 Score =  215 bits (548), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 56/404 (13%), Positives = 127/404 (31%), Gaps = 39/404 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   + +         +  GVK  +  A K F+A  ++  + +        S 
Sbjct: 32  GTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSG 91

Query: 61  YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E   ++   K  +    A+       + +   +++  +D   + ++K
Sbjct: 92  GELYTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVIDNYYEISLLEDILIERNEK 151

Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHN 165
             + +R+ P +           +  S+ G    +             S   ++ GL  H 
Sbjct: 152 ASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHI 211

Query: 166 NCENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK-DFCQRLKE 220
             +      F    + I  +   +        + ++LGGG            +  + +++
Sbjct: 212 GSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQ 271

Query: 221 FSEK----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268
             ++             +I++EPG ++V    T    V    E       +     +  +
Sbjct: 272 IMDEVRDVANNNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDN 331

Query: 269 VPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
           +   L       +           T  + G+ C +GD+            G+ ++     
Sbjct: 332 IRPALYDAHYDAVLAANPEKVAEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTG 391

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367
            Y     + +N I  P++           +   +Y +   N LS
Sbjct: 392 AYGYAMASNYNRIPRPSVVFVENGVDKLIVARETYENLVQNDLS 435


>gi|315282993|ref|ZP_07871276.1| diaminopimelate decarboxylase [Listeria marthii FSL S4-120]
 gi|313613364|gb|EFR87225.1| diaminopimelate decarboxylase [Listeria marthii FSL S4-120]
          Length = 436

 Score =  215 bits (548), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 58/404 (14%), Positives = 128/404 (31%), Gaps = 39/404 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   + +         +  GVK  +  A K F+A  ++  + +        S 
Sbjct: 32  GTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSG 91

Query: 61  YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E   ++   K  +    A+       + +   +++  +D   + ++K
Sbjct: 92  GELYTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVIDNYYEISLLEDILIERNEK 151

Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHN 165
             + +R+ P +           +  S+ G    +             S   ++ GL  H 
Sbjct: 152 ASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHI 211

Query: 166 NCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-DFCQRLKE 220
             +      F      ++  + +  G      + ++LGGG            +  + +++
Sbjct: 212 GSQIFETTGFKLAARRIMDKLVEWHGTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQ 271

Query: 221 FSEKYS----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAH 268
             ++             +I++EPG ++V    T    V    E         VD  +  +
Sbjct: 272 IMDEVRDVADSNDIAIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYLAVDGGMSDN 331

Query: 269 VPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
           +   L       +           T  + G+ C +GD+            G+ ++     
Sbjct: 332 IRPALYDAHYDAVLAANPEKVAEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTG 391

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367
            Y     + +N I  P +           +   +Y +   N LS
Sbjct: 392 AYGYAMASNYNRIPRPPVVFVENGIDKLVVARETYENLVQNDLS 435


>gi|46908186|ref|YP_014575.1| diaminopimelate decarboxylase [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|226224557|ref|YP_002758664.1| diaminopimelate decarboxylase [Listeria monocytogenes Clip81459]
 gi|254825552|ref|ZP_05230553.1| diaminopimelate decarboxylase [Listeria monocytogenes FSL J1-194]
 gi|254852854|ref|ZP_05242202.1| diaminopimelate decarboxylase [Listeria monocytogenes FSL R2-503]
 gi|254931876|ref|ZP_05265235.1| diaminopimelate decarboxylase [Listeria monocytogenes HPB2262]
 gi|255520093|ref|ZP_05387330.1| diaminopimelate decarboxylase [Listeria monocytogenes FSL J1-175]
 gi|300763736|ref|ZP_07073733.1| diaminopimelate decarboxylase [Listeria monocytogenes FSL N1-017]
 gi|46881456|gb|AAT04752.1| diaminopimelate decarboxylase [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|225877019|emb|CAS05728.1| Putative diaminopimelate decarboxylase [Listeria monocytogenes
           serotype 4b str. CLIP 80459]
 gi|258606187|gb|EEW18795.1| diaminopimelate decarboxylase [Listeria monocytogenes FSL R2-503]
 gi|293583427|gb|EFF95459.1| diaminopimelate decarboxylase [Listeria monocytogenes HPB2262]
 gi|293594793|gb|EFG02554.1| diaminopimelate decarboxylase [Listeria monocytogenes FSL J1-194]
 gi|300515472|gb|EFK42522.1| diaminopimelate decarboxylase [Listeria monocytogenes FSL N1-017]
 gi|328472794|gb|EGF43643.1| diaminopimelate decarboxylase [Listeria monocytogenes 220]
          Length = 436

 Score =  215 bits (548), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 56/404 (13%), Positives = 126/404 (31%), Gaps = 39/404 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   + +         +  GVK  +  A K F+A  ++  + +        S 
Sbjct: 32  GTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSG 91

Query: 61  YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E   ++   K  +    A+       + +   +++  +D   + ++K
Sbjct: 92  GELYTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVIDNYYEISLLEDILIERNEK 151

Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHN 165
             + +R+ P +           +  S+ G    +             S   ++ GL  H 
Sbjct: 152 ASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHI 211

Query: 166 NCENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK-DFCQRLKE 220
             +      F    + I  +   +        + ++LGGG            +  + +++
Sbjct: 212 GSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQ 271

Query: 221 FSEK----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268
             ++             +I++EPG ++V    T    V    E       +     +  +
Sbjct: 272 IMDEVRDVANNNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDN 331

Query: 269 VPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
           +   L       +           T  + G+ C +GD+            G+ ++     
Sbjct: 332 IRPALYDAHYDAVLAANPEKVAEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTG 391

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367
            Y     + +N I  P +           +   +Y +   N LS
Sbjct: 392 AYGYAMASNYNRIPRPPVVFVENGVDKLIVARETYENLVQNDLS 435


>gi|254827163|ref|ZP_05231850.1| lysA [Listeria monocytogenes FSL N3-165]
 gi|254831447|ref|ZP_05236102.1| hypothetical protein Lmon1_08838 [Listeria monocytogenes 10403S]
 gi|254899351|ref|ZP_05259275.1| hypothetical protein LmonJ_06044 [Listeria monocytogenes J0161]
 gi|254912510|ref|ZP_05262522.1| diaminopimelate decarboxylase [Listeria monocytogenes J2818]
 gi|254936837|ref|ZP_05268534.1| lysA [Listeria monocytogenes F6900]
 gi|255026088|ref|ZP_05298074.1| hypothetical protein LmonocytFSL_06525 [Listeria monocytogenes FSL
           J2-003]
 gi|284802397|ref|YP_003414262.1| diaminopimelate decarboxylase [Listeria monocytogenes 08-5578]
 gi|284995539|ref|YP_003417307.1| diaminopimelate decarboxylase [Listeria monocytogenes 08-5923]
 gi|258599545|gb|EEW12870.1| lysA [Listeria monocytogenes FSL N3-165]
 gi|258609433|gb|EEW22041.1| lysA [Listeria monocytogenes F6900]
 gi|284057959|gb|ADB68900.1| diaminopimelate decarboxylase [Listeria monocytogenes 08-5578]
 gi|284061006|gb|ADB71945.1| diaminopimelate decarboxylase [Listeria monocytogenes 08-5923]
 gi|293590495|gb|EFF98829.1| diaminopimelate decarboxylase [Listeria monocytogenes J2818]
          Length = 436

 Score =  215 bits (548), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 56/404 (13%), Positives = 126/404 (31%), Gaps = 39/404 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   + +         +  GVK  +  A K F+A  ++  + +        S 
Sbjct: 32  GTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSG 91

Query: 61  YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E   ++   K  +    A+       + +   +++  +D   + ++K
Sbjct: 92  GELYTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVIDNYYEISLLEDILIERNEK 151

Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHN 165
             + +R+ P +           +  S+ G    +             S   ++ GL  H 
Sbjct: 152 ASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHI 211

Query: 166 NCENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK-DFCQRLKE 220
             +      F    + I  +   +        + ++LGGG            +  + +++
Sbjct: 212 GSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQ 271

Query: 221 FSEK----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268
             ++             +I++EPG ++V    T    V    E       +     +  +
Sbjct: 272 IMDEVRDVAESNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDN 331

Query: 269 VPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
           +   L       +           T  + G+ C +GD+            G+ ++     
Sbjct: 332 IRPALYDAHYDAVLAANPEKVAEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTG 391

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367
            Y     + +N I  P +           +   +Y +   N LS
Sbjct: 392 AYGYAMASNYNRIPRPPVVFVENGVDKLIVARETYENLVQNDLS 435


>gi|302337975|ref|YP_003803181.1| Orn/DAP/Arg decarboxylase 2 [Spirochaeta smaragdinae DSM 11293]
 gi|301635160|gb|ADK80587.1| Orn/DAP/Arg decarboxylase 2 [Spirochaeta smaragdinae DSM 11293]
          Length = 420

 Score =  215 bits (548), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 66/394 (16%), Positives = 124/394 (31%), Gaps = 31/394 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           + TP++L D+  +L N            G K   A+K      + D L++   GT  SSL
Sbjct: 20  LPTPFHLYDEAAILENARYIKKAFAWAPGFKNYFAVKACPNPTILDLLHKEGFGTDCSSL 79

Query: 61  YEVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E++L       GE   +        E          I  + +S ++  +  A       
Sbjct: 80  PELILSEKSGIAGEEVMFTSNDTPAEEFKEAKRLGAIINLDDISHIDFLEKAAGIPELIC 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSF 172
                         +       ++ G      +++            GL         + 
Sbjct: 140 --FRYNPGDARSGNVIIGEPKEAKYGITRDQILDAYRMAKEKGAKRFGLHTMVASNELNP 197

Query: 173 LCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK 224
             F      + +   K       ++E+++LGGGI        +   +    + +K + +K
Sbjct: 198 EYFIETGRMLFELAVKIKEELGIKLEFVNLGGGIGIPYRLDQEPVDLVRVSEGIKGWYDK 257

Query: 225 YSVQ-------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
             V        I +E G  +      L T V  I++  K  V +D+S+   +   +    
Sbjct: 258 MIVPAGLDPLKIVMECGRVVTGPYGYLITRVRHIAKKYKTYVGLDASMANLMRPAIYGAY 317

Query: 278 SATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                             V G  C   D F        +++GD I+  D   +       
Sbjct: 318 HHITVLGKENEPPAMVCDVTGSLCENNDKFAIDRNLPEIEVGDLIAIHDAGAHGYAMGFN 377

Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           +NG       +     T++ IR   + +D +  L
Sbjct: 378 YNGKLRSAEVLIKDPETVELIRRAETMDDLFATL 411


>gi|333024412|ref|ZP_08452476.1| putative diaminopimelate decarboxylase [Streptomyces sp. Tu6071]
 gi|332744264|gb|EGJ74705.1| putative diaminopimelate decarboxylase [Streptomyces sp. Tu6071]
          Length = 465

 Score =  215 bits (548), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 60/398 (15%), Positives = 113/398 (28%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y +D++                G  +  A K F +  +   L++        S  E
Sbjct: 65  GTPAYFLDEEDFRTRCRDWRSAFGE-GADVFYAGKAFLSRAVVRWLHEEGLNLDVCSGGE 123

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           ++            A++   K               I+ ++  +L +    AQ L +   
Sbjct: 124 LLTALDAGMPAARIAFHGNNKTAAEIERAVAAGVGRIVVDSFQELVRVAHTAQALGRVQR 183

Query: 120 --LRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
             +R+   V               + G         E  +  +  +   + G+  H   +
Sbjct: 184 VQIRVTVGVEAHTHEFIATAHEDQKFGLALAGGQAAEAVRRALTLDGIELVGIHSHIGSQ 243

Query: 169 NKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F    + +             ++  I LGGG+               + +    
Sbjct: 244 IFDMAGFEVSARRVVGLLAEIRDEHGVELPEIDLGGGLGIAYTSDDDPREPHEIAKALGD 303

Query: 225 YSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271
              +             +EPG AIV  T      V  I      +  V VD  +  ++  
Sbjct: 304 IVTRECESAGLAVPRISVEPGRAIVGPTAFTLYEVGTIKPLEGLRTYVSVDGGMSDNIRT 363

Query: 272 YLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326
            L   E     A+   +  P    V G+ C +GDI     F    +  GD ++      Y
Sbjct: 364 ALYDAEYSVALASRTSDAAPMLVRVVGKHCESGDIVVRDAFLPADLAPGDLLAVPATGAY 423

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N    P +           +R  +  D   
Sbjct: 424 CRSMASNYNHALRPPVVAVRDGQARVVVRRETEEDLLR 461


>gi|315646372|ref|ZP_07899490.1| diaminopimelate decarboxylase [Paenibacillus vortex V453]
 gi|315278015|gb|EFU41335.1| diaminopimelate decarboxylase [Paenibacillus vortex V453]
          Length = 443

 Score =  215 bits (548), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 66/400 (16%), Positives = 134/400 (33%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++D+Q + N     +     +G   ++  A K F    M    ++        S 
Sbjct: 30  GTPLYIVDEQSVRNRCREYIEAFNASGLKFQVAYASKAFCVMAMCRLADEEGMSLDVVSD 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK- 116
            E+       F  E   ++   K  E   +   ++    + + V +L+  +  A + ++ 
Sbjct: 90  GELYTALQAGFPAERIHFHGNNKTPEEIEMALDAHIGCFVVDNVIELHMLQAIAAEKNRT 149

Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I LR+ P V           +  S+ G         E  K        N+ G+  H  
Sbjct: 150 VNILLRVTPGVEAHTHEYISTGQTDSKFGFDIGNGSAYEAVKLAEAQGNINLMGIHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK----DFCQRL 218
            +      F   ++ + +             + ++LGGG      D         + + +
Sbjct: 210 SQIFEVEGFQMAVQRVAEFASSVKEGLGVVFKVVNLGGGFGIRYVDGDTPLQVSQYVKAI 269

Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            +  + +         +I++EPG +IV +  T   TV    +       V     +  + 
Sbjct: 270 TDAVKTHFAGLGSELPEIWVEPGRSIVGDAGTTLYTVGTSKDIPGVRKYVAVDGGMTDNP 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   +      +    T  + G+ C +GD+         V+ GD ++      
Sbjct: 330 RPALYESKYEAVLANRANDKVEETVSIAGKCCESGDMLIWDLDLPKVETGDLLAVSCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           YN +  + +N I  P +       +   +R  S  D  +N
Sbjct: 390 YNYSMASNYNRIRKPAVVFVKDGQSNLVVRRESLADIISN 429


>gi|260893164|ref|YP_003239261.1| diaminopimelate decarboxylase [Ammonifex degensii KC4]
 gi|260865305|gb|ACX52411.1| diaminopimelate decarboxylase [Ammonifex degensii KC4]
          Length = 435

 Score =  215 bits (547), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 63/397 (15%), Positives = 118/397 (29%), Gaps = 36/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D++    N    L      G +   A K      +     +        S  E
Sbjct: 30  GTPLYVLDEEVFRANCRRYLCSL-GPGNRAAYAGKALLTLAICRICQEEGLYLDVVSAGE 88

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKI- 118
           +       F  E   ++   K  +   +         + +   +L   +++A+ L KK  
Sbjct: 89  LYTAVKAGFPPERLYFHGNNKSLQEIEMGLELGVGRFVVDNFYELELLEERARALGKKPA 148

Query: 119 -GLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
             LR+ P +           +  S+ G         E  +  + S    + GL  H   +
Sbjct: 149 ILLRLTPGIEAHTHEYIRTGQLDSKFGFPLATGVAEEAVRRALSSPHLELVGLHCHIGSQ 208

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ-------- 216
                 F      M+             +E + LGGG+             +        
Sbjct: 209 ILRLEPFQEAARVMVAFAASIRRKTGWVMEELDLGGGLGIRYTAEDDPPAIEDYVQAILR 268

Query: 217 RLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271
            ++E  ++      +I +EPG +IV        TV  I E       V     +  +   
Sbjct: 269 AVEEACQEEGLPLPRIVVEPGRSIVGPAGITLYTVGAIKEIPGVRTYVAVDGGMADNPRP 328

Query: 272 YLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
            L       +  N           V G+ C +GDI          + GD ++      YN
Sbjct: 329 ALYQARYEAVLANRMLEPPAVEVAVAGKCCESGDILIPAIKLPRPQPGDILAVFATGAYN 388

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            +    +N +  P + +         +   +  D  +
Sbjct: 389 YSMSMNYNRLPRPAMVLVRGGEVDLIVARETLEDLIS 425


>gi|301301010|ref|ZP_07207171.1| diaminopimelate decarboxylase [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|300851367|gb|EFK79090.1| diaminopimelate decarboxylase [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 430

 Score =  215 bits (547), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 65/400 (16%), Positives = 130/400 (32%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D  K+   +       +   VK  +  A K F++  M+D + +   G+   S 
Sbjct: 28  GTPTIVYDVAKIKEQIAKFKAGFEEENVKYHISYASKAFSSLAMYDLVAKSGIGSDVVSG 87

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK- 116
            E+    +     +   ++   K      +   SN   II +   +++   +   + +K 
Sbjct: 88  GELYAALKGGMDPQELEFHGNNKSRAELEMAVDSNVGYIIVDNFYEIDLLNEVLTEKNKT 147

Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I LR+ P +           +  S+ G         E  +  + +    V G+  H  
Sbjct: 148 ADILLRLAPGIHAETHEYISTGQAKSKFGFDLQSGQASEALEKTLANPRFKVLGVHSHIG 207

Query: 167 CEN----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK--------DF 214
            +             ++  +      +    E ++LGGG      D              
Sbjct: 208 SQIFATAGFVEAAKKLMDFLSAWKEKYDFTAEVLNLGGGFGIRYTDQDEPLDVKDFVKII 267

Query: 215 CQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            + +KE S++ +  +   ++EPG ++V        TV    +       V     +  ++
Sbjct: 268 VEAVKEKSKELNYPMPAIWIEPGRSVVGEAGVSLYTVGSRKDVEGVGSFVAVDGGMGDNI 327

Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   E   +            A + G+ C +GDI  + +     + GD I+      
Sbjct: 328 RPALYGAEYDAVLAKDPNAPIAQNASIVGKYCESGDILIKDYDFPKTEPGDVIAMLSTGA 387

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y     + +N    P I           ++  SY D   N
Sbjct: 388 YGYVMASNYNRNPRPAIVFVEDGKARLVVKRESYEDMIRN 427


>gi|90961979|ref|YP_535895.1| diaminopimelate decarboxylase [Lactobacillus salivarius UCC118]
 gi|90821173|gb|ABD99812.1| Diaminopimelate decarboxylase [Lactobacillus salivarius UCC118]
          Length = 430

 Score =  215 bits (547), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 65/400 (16%), Positives = 130/400 (32%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D  K+   +       +   VK  +  A K F++  M+D + +   G+   S 
Sbjct: 28  GTPTIVYDVAKIKEQIAKFKAGFEEENVKYHISYASKAFSSLAMYDLVAKSGIGSDVVSG 87

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK- 116
            E+    +     +   ++   K      +   SN   II +   +++   +   + +K 
Sbjct: 88  GELYAALKGGMDPQELEFHGNNKSRAELEMAVDSNVGYIIVDNFYEIDLLNEVLTEKNKT 147

Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I LR+ P +           +  S+ G         E  +  + +    V G+  H  
Sbjct: 148 ADILLRLAPGIHAETHEYISTGQAKSKFGFDLQSGQASEALEKTLANPRFKVLGVHSHIG 207

Query: 167 CEN----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK--------DF 214
            +             ++  +      +    E ++LGGG      D              
Sbjct: 208 SQIFATAGFVEAAKKLMDFLSAWKEKYDFTAEVLNLGGGFGIRYTDQDEPLDVKDFVKII 267

Query: 215 CQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            + +KE S++ +  +   ++EPG ++V        TV    +       V     +  ++
Sbjct: 268 VEAVKEKSKELNYPMPAIWIEPGRSVVGEAGVSLYTVGSRKDVEGVGSFVAVDGGMGDNI 327

Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   E   +            A + G+ C +GDI  + +     + GD I+      
Sbjct: 328 RPALYGAEYDAVLAKDPNAPIAQNASIVGKYCESGDILIKDYDFPKTEPGDVIAMLSTGA 387

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y     + +N    P I           ++  SY D   N
Sbjct: 388 YGYVMASNYNRNPRPAIVFVEDGKARLVVKRESYEDMIRN 427


>gi|16803991|ref|NP_465476.1| hypothetical protein lmo1952 [Listeria monocytogenes EGD-e]
 gi|224498598|ref|ZP_03666947.1| hypothetical protein LmonF1_02429 [Listeria monocytogenes Finland
           1988]
 gi|224501248|ref|ZP_03669555.1| hypothetical protein LmonFR_01785 [Listeria monocytogenes FSL
           R2-561]
 gi|16411405|emb|CAD00030.1| lysA [Listeria monocytogenes EGD-e]
          Length = 436

 Score =  215 bits (547), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 56/404 (13%), Positives = 126/404 (31%), Gaps = 39/404 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   + +         +  GVK  +  A K F+A  ++  + +        S 
Sbjct: 32  GTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSG 91

Query: 61  YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E   ++   K  +    A+       + +   +++  +D   + ++K
Sbjct: 92  GELFTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVIDNYYEISLLEDILIERNEK 151

Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHN 165
             + +R+ P +           +  S+ G    +             S   ++ GL  H 
Sbjct: 152 ASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHI 211

Query: 166 NCENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK-DFCQRLKE 220
             +      F    + I  +   +        + ++LGGG            +  + +++
Sbjct: 212 GSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQ 271

Query: 221 FSEK----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268
             ++             +I++EPG ++V    T    V    E       +     +  +
Sbjct: 272 IMDEVRDVAESNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDN 331

Query: 269 VPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
           +   L       +           T  + G+ C +GD+            G+ ++     
Sbjct: 332 IRPALYDAHYDAVLAANPEKVAEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTG 391

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367
            Y     + +N I  P +           +   +Y +   N LS
Sbjct: 392 AYGYAMASNYNRIPRPPVVFVENGVDKLIVARETYENLVQNDLS 435


>gi|228907150|ref|ZP_04071012.1| Diaminopimelate decarboxylase [Bacillus thuringiensis IBL 200]
 gi|228852482|gb|EEM97274.1| Diaminopimelate decarboxylase [Bacillus thuringiensis IBL 200]
          Length = 438

 Score =  215 bits (547), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 60/400 (15%), Positives = 123/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 30  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+       F      ++   K  E    A+ +N    + +   +L    D A +    
Sbjct: 90  GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFFELEVLHDLAMQHGKF 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G    +          ++    NV G+  H  
Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIGFALQKSNYNVLGIHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDF-------- 214
            +    + F   ++ + +       Q    ++ +++GGG      +              
Sbjct: 210 SQIFETVGFVRAIEVLRQFLEKVREQTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +      E    +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 270 TSAVREQFTVCEYPLPEIWIEPGRSIVGDAGTTIYTVGSVKDIPGIRKYVSVDGGMTDNL 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +       + G+ C +GD+         V   D ++      
Sbjct: 330 RPALYSARYEAMLANRGNDENEELVSIAGKCCESGDMLIWDIHLPKVAASDLLAVSCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGN 429


>gi|227552372|ref|ZP_03982421.1| diaminopimelate decarboxylase [Enterococcus faecium TX1330]
 gi|257895054|ref|ZP_05674707.1| diaminopimelate decarboxylase [Enterococcus faecium Com12]
 gi|293377961|ref|ZP_06624142.1| diaminopimelate decarboxylase [Enterococcus faecium PC4.1]
 gi|227178493|gb|EEI59465.1| diaminopimelate decarboxylase [Enterococcus faecium TX1330]
 gi|257831619|gb|EEV58040.1| diaminopimelate decarboxylase [Enterococcus faecium Com12]
 gi|292643508|gb|EFF61637.1| diaminopimelate decarboxylase [Enterococcus faecium PC4.1]
          Length = 419

 Score =  215 bits (547), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 62/394 (15%), Positives = 129/394 (32%), Gaps = 33/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           KTP Y+ D++K+   + +       K+   K+L A K F    M   +++Y  G    S 
Sbjct: 19  KTPLYVYDEEKMRQTMLSFKRGFVSKHFDTKVLYASKAFQTIEMLRLVHEYGFGLDVVSG 78

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKA--QKLH 115
            E+    +  F  +   ++   K  E  +     +   ++ + + ++   ++ +      
Sbjct: 79  GEIYTALQADFPRDAIYFHGNNKTPEELSYALENELLHVVADNLMEVELLEELSQRYSKK 138

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
             + LR+N  V              S+ G   +            ES    + G   H  
Sbjct: 139 VDVMLRLNVGVEAHTHEYIVTAHIDSKFGMSYESKECQQALQLIKESSYLELEGFHAHIG 198

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226
            +      + A +  +      F   +  ++LGGG              +   +   +Y+
Sbjct: 199 SQIFDVTAWLAEIDKLTSYLIDFDQPLS-LNLGGGFGIRYTQNDQPIPIEEALKKLIEYT 257

Query: 227 -----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL 274
                       Q+ +EPG +IV    T   T+  I +         D  +  ++   L 
Sbjct: 258 EESLDKRKLTIRQLLIEPGRSIVGEAGTTLYTIGFIKKTPHKKYYFVDGGMTDNIRPALY 317

Query: 275 YQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                   A            + G+ C +GD+  +  +    K GD ++      Y  + 
Sbjct: 318 QAAYDCDLAEKLSEEKTEKVTIAGKMCESGDVVIKETYLPKAKSGDLLAVYSTGAYGYSM 377

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            + +N    P +   N   +   +R   ++D   
Sbjct: 378 SSNYNRATRPAVVFVNNGQSRLVVRRQVFSDLLR 411


>gi|313607903|gb|EFR84055.1| diaminopimelate decarboxylase [Listeria monocytogenes FSL F2-208]
          Length = 436

 Score =  215 bits (547), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 56/404 (13%), Positives = 126/404 (31%), Gaps = 39/404 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   + +         +  GVK  +  A K F+A  ++  + +        S 
Sbjct: 32  GTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSG 91

Query: 61  YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E   ++   K  +    A+       + +   +++  +D   + ++K
Sbjct: 92  GELYTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVIDNYYEISLLEDILIERNEK 151

Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHN 165
             + +R+ P +           +  S+ G    +             S   ++ GL  H 
Sbjct: 152 ASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHI 211

Query: 166 NCENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK-DFCQRLKE 220
             +      F    + I  +   +        + ++LGGG            +  + +++
Sbjct: 212 GSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPGEYVRQ 271

Query: 221 FSEK----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268
             ++             +I++EPG ++V    T    V    E       +     +  +
Sbjct: 272 IMDEVRDVANSNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDN 331

Query: 269 VPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
           +   L       +           T  + G+ C +GD+            G+ ++     
Sbjct: 332 IRPALYDAHYDAVLAANPEKVAEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTG 391

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367
            Y     + +N I  P +           +   +Y +   N LS
Sbjct: 392 AYGYAMASNYNRIPRPPVVFVENGVDKLIVARETYENLVQNDLS 435


>gi|288918854|ref|ZP_06413198.1| diaminopimelate decarboxylase [Frankia sp. EUN1f]
 gi|288349706|gb|EFC83939.1| diaminopimelate decarboxylase [Frankia sp. EUN1f]
          Length = 439

 Score =  215 bits (547), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 53/401 (13%), Positives = 108/401 (26%), Gaps = 39/401 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+     L+++        ++    +  + K  +   +   L     G  + S  E
Sbjct: 26  GTPTYVYSASTLVDHYVRFAKAFESIDPLICFSAKALSNVHLLRILGDQGAGIDTVSGGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +          E        K  D   +AV  +   I   +  ++      A++   +  
Sbjct: 86  LHRALLAGVDPERIVLAGVGKSADELREAVRRDIRCINVESEEEVALLARIAREEGGRPR 145

Query: 120 LRINPSVSY----SKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCE 168
           L I  +                    + G   +                  G+  H    
Sbjct: 146 LAIRVNPDIAPDLRTPARTTTAVRGVKFGVDIERAAALFSRAAGDGFLRPEGIHVHIGSP 205

Query: 169 NKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFS 222
                 ++  ++ +     +       +  I+LGGG              +F   +    
Sbjct: 206 IFDPQVYAMAIERVLALVADIEAAGNPVTTINLGGGFPAEYTEGSAPGWDEFADAICPRL 265

Query: 223 EKYSV---QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA 279
           E +     QI  EPG  I  N   L   V    +  +  ++V  +   H+    +Y    
Sbjct: 266 EGFVHRGGQIIFEPGRTIAANAGVLLAAVRYRKQAGERELVVIDAGMTHIARAAMYDSYH 325

Query: 280 TIYPN----------------TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323
            ++P                        V G  C + D   +      +  GD ++    
Sbjct: 326 FMWPVSPVNGAIPRSRDQKSVDDLVAYDVVGPICESSDYLAKGRALPAMVAGDLVAIFTA 385

Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             Y +   + +N    P   +          R  +Y+D   
Sbjct: 386 GAYGMTMTSNYNSQLRPAEVLVRGAEAKLVRRRETYDDLVA 426


>gi|30019568|ref|NP_831199.1| diaminopimelate decarboxylase [Bacillus cereus ATCC 14579]
 gi|229126834|ref|ZP_04255846.1| Diaminopimelate decarboxylase [Bacillus cereus BDRD-Cer4]
 gi|29895112|gb|AAP08400.1| Diaminopimelate decarboxylase [Bacillus cereus ATCC 14579]
 gi|228656774|gb|EEL12600.1| Diaminopimelate decarboxylase [Bacillus cereus BDRD-Cer4]
          Length = 438

 Score =  215 bits (547), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 60/400 (15%), Positives = 121/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D+  +           K +G   ++  A K F    M     +        S 
Sbjct: 30  GTPLYVYDEGSIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+       F      ++   K  E    A+ +N    + +   +L    D A +    
Sbjct: 90  GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFFELEVLHDLAMQHGKF 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G    +          ++    NV G+  H  
Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIGLALQKSNYNVLGIHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F   ++ + +       Q    ++ +++GGG      +              
Sbjct: 210 SQIFETAGFVRAIEVLRQFLEEVREQTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +      E    +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 270 TSAVREQFTVCEYPLPEIWIEPGRSIVGDAGTTIYTVGSVKDIPGIRKYVSVDGGMTDNL 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +       + G+ C +GD+         V   D ++      
Sbjct: 330 RPALYNARYEAMLANRANDENEELVSIAGKCCESGDMLIWDIHLPKVAASDLLAVSCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGN 429


>gi|290892112|ref|ZP_06555108.1| diaminopimelate decarboxylase [Listeria monocytogenes FSL J2-071]
 gi|290558235|gb|EFD91753.1| diaminopimelate decarboxylase [Listeria monocytogenes FSL J2-071]
          Length = 436

 Score =  215 bits (547), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 56/404 (13%), Positives = 126/404 (31%), Gaps = 39/404 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   + +         +  GVK  +  A K F+A  ++  + +        S 
Sbjct: 32  GTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSG 91

Query: 61  YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E   ++   K  +    A+       + +   +++  +D   + ++K
Sbjct: 92  GELYTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVIDNYYEISLLEDILIERNEK 151

Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHN 165
             + +R+ P +           +  S+ G    +             S   ++ GL  H 
Sbjct: 152 ASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHI 211

Query: 166 NCENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK-DFCQRLKE 220
             +      F    + I  +   +        + ++LGGG            +  + +++
Sbjct: 212 GSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPGEYVRQ 271

Query: 221 FSEK----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268
             ++             +I++EPG ++V    T    V    E       +     +  +
Sbjct: 272 IMDEVRDVANSNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDN 331

Query: 269 VPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
           +   L       +           T  + G+ C +GD+            G+ ++     
Sbjct: 332 IRPALYDAHYDAVLAANPEKVAEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTG 391

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367
            Y     + +N I  P +           +   +Y +   N LS
Sbjct: 392 AYGYAMASNYNRIPRPPVVFVENGIDKLIVARETYENLVQNDLS 435


>gi|16801132|ref|NP_471400.1| hypothetical protein lin2066 [Listeria innocua Clip11262]
 gi|16414567|emb|CAC97296.1| lysA [Listeria innocua Clip11262]
 gi|313618118|gb|EFR90219.1| diaminopimelate decarboxylase [Listeria innocua FSL S4-378]
          Length = 436

 Score =  215 bits (547), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 56/404 (13%), Positives = 127/404 (31%), Gaps = 39/404 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   + +         +  GVK  +  A K F+A  ++  + +        S 
Sbjct: 32  GTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSG 91

Query: 61  YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E   ++   K  +    A+       + +   +++  +D   + ++K
Sbjct: 92  GELYTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVIDNYYEISLLEDILIERNEK 151

Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHN 165
             + +R+ P +           +  S+ G    +             S   ++ GL  H 
Sbjct: 152 AAVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHI 211

Query: 166 NCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-DFCQRLKE 220
             +      F      ++  + +  G      + ++LGGG            +  + +++
Sbjct: 212 GSQIFETTGFKLAARRIMDKLVEWHGTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQ 271

Query: 221 FSEKYS----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268
             ++             +I++EPG ++V    T    V    E       +     +  +
Sbjct: 272 IMDEVRDVANSNDIAIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDN 331

Query: 269 VPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
           +   L       +           T  + G+ C +GD+            G+ ++     
Sbjct: 332 IRPALYDAHYDAVLAANPEKVAEETVAIAGKCCESGDMLIWDLPLPKSDAGEILAVFCTG 391

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367
            Y     + +N I  P +           +   +Y +   N LS
Sbjct: 392 AYGYAMASNYNRIPRPPVVFVENGMDKLIVARETYENLVQNDLS 435


>gi|228984597|ref|ZP_04144772.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228775124|gb|EEM23515.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 449

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 59/400 (14%), Positives = 122/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 41  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 100

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+    +  F      ++   K  E    A+ +N    + +   +L    D A      
Sbjct: 101 GELYTALQSGFPASRIHFHGNNKTDEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 160

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G         +  +  ++    NV G+  H  
Sbjct: 161 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 220

Query: 167 CENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F   ++ + +            ++ +++GGG      +              
Sbjct: 221 SQIFETAGFVRAIEVLRQFLEEVRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 280

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +      E    +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 281 TSAVREQFTVCEYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 340

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +       + G+ C +GD+         V   D ++      
Sbjct: 341 RPALYNARYEAMLANRGNDENEEVVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 400

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 401 YGYSMANNYNRIRRPAVVFAKGGTSQIVVERETYENIIGN 440


>gi|260062189|ref|YP_003195269.1| diaminopimelate decarboxylase [Robiginitalea biformata HTCC2501]
 gi|88783751|gb|EAR14922.1| diaminopimelate decarboxylase [Robiginitalea biformata HTCC2501]
          Length = 420

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 65/384 (16%), Positives = 111/384 (28%), Gaps = 27/384 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           P Y+ D  K+ +      +  +    +KL  A K  +   +   LN    G  + S+ EV
Sbjct: 16  PVYVYDAGKIQSQFKRLTHAFRVVPKLKLNYAAKALSNLSILRLLNNLGSGLDTVSIQEV 75

Query: 64  MLGH-EKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            LG    +  E   Y        EI+   S    I  + +S L +F  K       + +R
Sbjct: 76  QLGLLAGYRPEDIIYTPNGVSLEEIEEAASLGVQINIDNLSILEQFGSK--HPDIPVCIR 133

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFLCF 175
           INP V              S+ G                   +NG+  H   +      F
Sbjct: 134 INPHVMAGGNSKISVGHIDSKFGISIHQIPHLLRIVELTKMKINGIHMHTGSDILDIDVF 193

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
               + I  +       +E+I  G G     K+  ++   + L E       +     G 
Sbjct: 194 LYASE-ILFDTAMHFKDLEFIDFGSGFKVPYKEGDIETNVEELGEKLGGRFREFCDAYGR 252

Query: 236 ----------AIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIYPN 284
                      +V+        V  + +        VDS     +   L          +
Sbjct: 253 ELTLAFEPGKFLVSEAGYFLARVNVVKQTTSTVFAGVDSGFNHLIRPMLYGANHHIENLS 312

Query: 285 T---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                     V G  C   D F      + +  GD + F +   Y     + +N    P 
Sbjct: 313 NPGGKERYYSVVGYICET-DTFASNRRIREISEGDILCFRNAGAYCFTMASNYNSRFRPA 371

Query: 342 IAVKNVDGTIKAIREFSYNDYYNN 365
             +          +  ++ D   N
Sbjct: 372 EVLWMDGKAHLIRKRENFEDLIRN 395


>gi|217963896|ref|YP_002349574.1| diaminopimelate decarboxylase [Listeria monocytogenes HCC23]
 gi|217333166|gb|ACK38960.1| diaminopimelate decarboxylase [Listeria monocytogenes HCC23]
 gi|307571534|emb|CAR84713.1| lysA [Listeria monocytogenes L99]
          Length = 436

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 55/404 (13%), Positives = 126/404 (31%), Gaps = 39/404 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   + +         +  GVK  +  A K F+A  ++  + +        S 
Sbjct: 32  GTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSG 91

Query: 61  YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E   ++   K  +    A+       + +   +++  ++   + ++K
Sbjct: 92  GELYTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVIDNYYEISLLEEILIERNEK 151

Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHN 165
             + +R+ P +           +  S+ G    +             S   ++ GL  H 
Sbjct: 152 ASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHI 211

Query: 166 NCENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK-DFCQRLKE 220
             +      F    + I  +   +        + ++LGGG            +  + +++
Sbjct: 212 GSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPGEYVRQ 271

Query: 221 FSEK----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268
             ++             +I++EPG ++V    T    V    E       +     +  +
Sbjct: 272 IMDEVRDVANSNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDN 331

Query: 269 VPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
           +   L       +           T  + G+ C +GD+            G+ ++     
Sbjct: 332 IRPALYDAHYDAVLAANPEKVAEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTG 391

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367
            Y     + +N I  P +           +   +Y +   N LS
Sbjct: 392 AYGYAMASNYNRIPRPPVVFVENGIDKLIVARETYENLVQNDLS 435


>gi|302381729|ref|YP_003817552.1| diaminopimelate decarboxylase [Brevundimonas subvibrioides ATCC
           15264]
 gi|302192357|gb|ADK99928.1| diaminopimelate decarboxylase [Brevundimonas subvibrioides ATCC
           15264]
          Length = 424

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 56/393 (14%), Positives = 113/393 (28%), Gaps = 29/393 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYI-----RKNAGVKLLLALKCFAAWGMFDTLNQYMDGTT 56
           + TP Y+     L  +                   +  A+K  +   +  TL +   G  
Sbjct: 25  VGTPAYVYSTATLSRHYGVLREAVDAHPAAFGDALIAFAVKANSNLSVLATLARLGSGAD 84

Query: 57  SSSLYEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA-- 111
           + S  E+              ++   K     A         I   + ++L++    A  
Sbjct: 85  TVSEGEIRRALKAGIPAARIIFSGVGKTDAELAYALDVGVRQINVESPAELDRLIAVAAE 144

Query: 112 QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFH 164
           +     I +R+NP +               + G    + +        S      GL  H
Sbjct: 145 KGACPDIAIRVNPKIGAGGHAKITTGGEGDKFGIPADEALALYARAAASPHVTPVGLACH 204

Query: 165 NNCENKSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTD----KDYPVKDFCQR 217
              +        A  + + +           +  + LGGG+        +   V D+   
Sbjct: 205 IGSQIIDLTPLEAAFRLLREMTLTLRGQGLSVTRLDLGGGLGVPYSGGAETASVADYAAM 264

Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDYLLY 275
                E   V+   EPG  +  N   L   V+ I+E    +  +++D+++   V   +  
Sbjct: 265 AAGVLEGLEVEAAFEPGRLLAANAGVLLARVIQITERADGRRFLVLDAAMNDLVRPAMYD 324

Query: 276 QESATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                              + G  C  GD F       P++ GD + F     Y     +
Sbjct: 325 AFHEVKPVTPRDGDLIAYDIVGPVCETGDTFARGRDLPPLQAGDLVVFTGAGAYGAVMSS 384

Query: 333 WFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            +N   +    + +           +Y++    
Sbjct: 385 EYNSRPLVPEVLVDEARWAVVRGRPTYDEMLTR 417


>gi|218232998|ref|YP_002366201.1| diaminopimelate decarboxylase [Bacillus cereus B4264]
 gi|218160955|gb|ACK60947.1| diaminopimelate decarboxylase [Bacillus cereus B4264]
          Length = 438

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 60/400 (15%), Positives = 122/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 30  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQIAYASKAFLCMEMCRVAREESMSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+       F      ++   K  E    A+ +N    + +   +L    D A +    
Sbjct: 90  GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFFELEVLHDLAMQHGKF 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G    +          ++    NV G+  H  
Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIGFALQKSNYNVLGIHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F   ++ + +       Q    ++ +++GGG      +              
Sbjct: 210 SQIFETAGFVRAIEVLRQFLEEVREQTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +      E    +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 270 TSAVREQFTVCEYPLPEIWIEPGRSIVGDAGTTIYTVGSVKDIPGIRKYVSVDGGMTDNL 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +       + G+ C +GD+         V   D ++      
Sbjct: 330 RPALYNARYEAMLANRANDENEELVSIAGKCCESGDMLIWDIHLPKVAASDLLAVSCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGN 429


>gi|302542535|ref|ZP_07294877.1| diaminopimelate decarboxylase [Streptomyces hygroscopicus ATCC
           53653]
 gi|302460153|gb|EFL23246.1| diaminopimelate decarboxylase [Streptomyces himastatinicus ATCC
           53653]
          Length = 463

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 60/398 (15%), Positives = 119/398 (29%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y +D+                    +  A K F +  +   L++        S  E
Sbjct: 63  GTPAYFLDEDDFRARCRAWREAFGE-DADVFYAGKAFLSRAVVRWLHEEGLNLDVCSEGE 121

Query: 63  VMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           ++         E  A +   K  +    AV +    I+ ++  ++ +    AQ L K+  
Sbjct: 122 LVTALAAGIPAERIALHGNNKSAKEIHRAVEAGVGRIVLDSFQEIVRVAHIAQGLGKRQK 181

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
             +R+   V               + G            +  ++ +   + G+  H   +
Sbjct: 182 VQIRVTVGVEAHTHEFIATAHEDQKFGIPLAGGQAAEAVRRALKLDGLELIGVHSHIGSQ 241

Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F          +++       ++  I LGGG+               + +   +
Sbjct: 242 IFDTSGFEVAAHRVVGLLKEVRDEHGVELPEIDLGGGLGIAYTPDDDPSEPHDIAKALRE 301

Query: 225 YSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271
              +             +EPG AIV  T      V  + E    +  V VD  +  ++  
Sbjct: 302 IVTRECAGAGLSVPRLSVEPGRAIVGPTAFTLYEVGTVKELPGLRTYVSVDGGMSDNIRT 361

Query: 272 YLLYQESATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326
            L   E +           P  + V G+ C +GDI     F    +  GD ++      Y
Sbjct: 362 ALYDAEYSVALVSRSSTAEPMVSRVVGKHCESGDIVVRDAFLPADLAPGDLLAVPATGAY 421

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N    P +         + +R  +  D   
Sbjct: 422 CRSMASNYNHALRPPVVAVRGGEAREIVRRETEEDLLR 459


>gi|256842929|ref|ZP_05548417.1| diaminopimelate decarboxylase [Lactobacillus crispatus 125-2-CHN]
 gi|256614349|gb|EEU19550.1| diaminopimelate decarboxylase [Lactobacillus crispatus 125-2-CHN]
          Length = 436

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 61/398 (15%), Positives = 121/398 (30%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D  ++   +     + +       +  A K FAA  M+  + +    T   S 
Sbjct: 31  GTPLVVYDVDQIRRQIRAFKKVFEEENMAYAVSYASKAFAAIAMYQVIAEEGAYTDVVSA 90

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F  E  +++   K      +   ++   II +   ++             
Sbjct: 91  GELFTAIKANFPMERVSFHGNNKSLTELEMAVKNHVGKIIIDNFHEIQLLAQVLKKYDAT 150

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNN 166
             + LRI P +S          +  S+ G   +           + +    + G+  H  
Sbjct: 151 ISVMLRIAPGISAHTHEYDQTGQIDSKFGFDLESGQAEKALKQVLANPRMKMLGIHAHIG 210

Query: 167 CENKSFLCFSAMLKNIE----KEFGHFITQIEWISLGGGIHFTDKDYPVK--------DF 214
            +  +   F    + +          +    + I++GGG                     
Sbjct: 211 SQIFALNGFEMGAQKLMVVAQDWREKYGYLAQVINVGGGFGIKYTQEDHPLRPEEFVKTI 270

Query: 215 CQRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            + +K  +EK +     I +EPG +IV        TV    +       +     +  ++
Sbjct: 271 VKVIKTEAEKMNYPLPEIDIEPGRSIVGPAGYNLYTVGSRKDIPGYRSYITVDGGMGDNI 330

Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +  T+              + G+ C +GDI  E      VK GD ++  D   
Sbjct: 331 RPALYQAKYETVLATDPQAPLTEHVRIAGKYCESGDILAEDQALPQVKAGDLLAMLDTGA 390

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
           Y  +  + +N    P +           I+  S  D  
Sbjct: 391 YGYSMASNYNRNPRPVVVFAENGKAKLVIKRESLEDLV 428


>gi|294495567|ref|YP_003542060.1| diaminopimelate decarboxylase [Methanohalophilus mahii DSM 5219]
 gi|292666566|gb|ADE36415.1| diaminopimelate decarboxylase [Methanohalophilus mahii DSM 5219]
          Length = 420

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 65/393 (16%), Positives = 120/393 (30%), Gaps = 31/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +L N++          G +   A+K      +   L     G   SSL 
Sbjct: 21  PTPFHLYDEKGILENVEKLKEAFGILEGFQEYYAVKALPNPYILKILKNKGFGADCSSLP 80

Query: 62  EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E++L       GE   ++       E          I  + +S ++  +  A        
Sbjct: 81  ELVLAEKAGIVGENIMFSSNDTPAEEFVKAKELGAIINLDDISHIDYLEKHASLPEMIC- 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVNGLMFHNNCENK----- 170
                  +  K      N   ++ G   +   E       K V     H    +      
Sbjct: 140 -FRYNPGALKKGNKFIGNPEDAKYGFTREQLFEGYKKLADKGVKRFGIHTMVASNELDPT 198

Query: 171 -SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
                   + + I         + E+ +LGGGI    +          + +  ++   +I
Sbjct: 199 YFIETARILFEVIADISKELGIKFEFANLGGGIGIPYEPDQEPVPYDVIAKGVKEEYDKI 258

Query: 230 Y-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                       LE G  I      L + V  +    K+   +D+++   +   +     
Sbjct: 259 ISANGLDPLKIYLECGRVITGPYGYLISKVRHLKHTYKDFAGMDATMANLMRPGVYGAYH 318

Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
               P        +T  V G  C   D F        ++IGD ++  D   +       +
Sbjct: 319 HITVPGKENQPHDHTYDVTGSLCENNDKFAIDRKLPEIEIGDILAMHDTGAHGHAMGFNY 378

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       +   DG+   IR   +  DY+  L
Sbjct: 379 NGKLRSAEILLREDGSTVQIRRAETMEDYFATL 411


>gi|317485778|ref|ZP_07944644.1| diaminopimelate decarboxylase [Bilophila wadsworthia 3_1_6]
 gi|316922972|gb|EFV44192.1| diaminopimelate decarboxylase [Bilophila wadsworthia 3_1_6]
          Length = 424

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 62/394 (15%), Positives = 123/394 (31%), Gaps = 34/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ ++  L       L +    G  +  + K      +   + +      + S  E
Sbjct: 28  GTPLYVYNEDVLRRRCRELLSLSSLPGFHVNYSAKANTNLALLRIVREEGCHADAMSPGE 87

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTII-FNTVSQLNKFKDKAQKLHKKIGL 120
           + +     F  +   Y       E     ++   I+  +++SQL+++         K+ +
Sbjct: 88  LHINKLAGFTPDRLLYVCNNVSAEEMKNAADNGLIVSVDSLSQLDQYGKV--NPGGKVMI 145

Query: 121 RINPSVSYSKFILADPNRPFSRLGE------KCKDKIESEIKNVNGLMFHNNCENKSFLC 174
           RINP +              ++ G       + +  ++     + G+  H          
Sbjct: 146 RINPGIGAGHHKKVITAGKETKFGIDPTSLDEVRALLKKHSLTLAGVNQHIGSLFMEPDN 205

Query: 175 FSAMLKNIEKE----FGHFITQIEWISLGGGIHFTDKDYPVKDF----------CQRLKE 220
           +   ++ +           +  IE I  GGG+    + Y  +               L  
Sbjct: 206 YLNAIEFLLHFVQSDLADLLPGIEIIDFGGGLGIPYRKYEEEPRLDMAELGRRLHALLSA 265

Query: 221 FSEK--YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQE 277
           + E+  Y  + ++EPG  +V     L  TV     N +N  +  D      V   +    
Sbjct: 266 WVEETGYKGKFFIEPGRYVVAECGVLLGTVHATKFNGENRYVGTDLGFNVLVRPAMYDSF 325

Query: 278 SATIYPNTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                   G           + G  C +GDI  +      +K GD ++  D   Y     
Sbjct: 326 HDIEIFRDGGEPDTDLVEQSIVGNICESGDILAKKRMLPLIKEGDIVAALDAGAYGFVMS 385

Query: 332 NWFNGINMPTIAVKNVDGT-IKAIREFSYNDYYN 364
           + +N        +   DGT     R  + +D   
Sbjct: 386 SSYNQRPRAAEVLITSDGTPKLIRRRETLDDLTR 419


>gi|254382308|ref|ZP_04997668.1| diaminopimelate decarboxylase [Streptomyces sp. Mg1]
 gi|194341213|gb|EDX22179.1| diaminopimelate decarboxylase [Streptomyces sp. Mg1]
          Length = 463

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 59/398 (14%), Positives = 119/398 (29%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP + +D++          +        +  A K F +  +   L +        S  E
Sbjct: 63  GTPAFFLDEEDFRARCRAWAHAF-GPDADVFYAGKAFLSKAVVKWLKEEGLNLDVCSGGE 121

Query: 63  VMLGHE-KFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117
           +             A++   K       AV +    I+ ++  ++ +    A++  + + 
Sbjct: 122 LTTALAAGMPAARIAFHGNNKSVAEVTRAVEAGVGRIVLDSFQEIARVAHIARERGVRQP 181

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G    D          +  +   + G+  H   +
Sbjct: 182 VQIRVTVGVEAHTHEFIATAHEDQKFGIAVADGSAAEAVRRALGHDSLELLGVHSHIGSQ 241

Query: 169 NKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F    K + +           ++  I LGGG+               + +   +
Sbjct: 242 IFDMAGFEVSAKRVVRLLAAVRDEHGVELPEIDLGGGLGIAYTSADDPREPHEIAKALHE 301

Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271
                       + +I +EPG AIV  T      V  I      +  V VD  +  ++  
Sbjct: 302 IVARECEAAGLRAPRISVEPGRAIVGPTAFTLYEVGTIKPLEGLRTYVSVDGGMSDNIRT 361

Query: 272 YLLYQESATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326
            L   E A        +  P    V G+ C +GDI  +  F    +  GD ++      Y
Sbjct: 362 ALYDAEYAVTLVSRTSDAEPMLVRVVGKHCESGDIVVKDAFLPADLAPGDLLAVPATGAY 421

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N    P +           +R  +  D   
Sbjct: 422 CRSMASNYNHALRPPVVAVRDGQGRVIVRRETEEDLLR 459


>gi|294633676|ref|ZP_06712234.1| diaminopimelate decarboxylase [Streptomyces sp. e14]
 gi|292830318|gb|EFF88669.1| diaminopimelate decarboxylase [Streptomyces sp. e14]
          Length = 444

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 65/397 (16%), Positives = 121/397 (30%), Gaps = 36/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+ ++                ++L A K F    M   +++   G    S  E
Sbjct: 46  GTPVYVLDEAEVRTRCRAYRDAF--PDAEILYAAKAFLCRAMIHWMDEEGLGLDVCSAGE 103

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL-HKKI 118
           + L     F  E    +   K               I+ ++ S++ +         H+K+
Sbjct: 104 LELAVTTGFPAERIVLHGNAKSPRDLESALRLGVGRIVIDSPSEIARLAAAVGPRGHQKV 163

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCEN 169
            +R+ P +S              + G    D          +E     + GL  H   + 
Sbjct: 164 MVRVAPGISAGGHEKIRTGTEDQKFGLSISDGCAQHAITRTLEQPQLELTGLHCHLGSQI 223

Query: 170 KSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEF 221
            S   +      +   +    G     +  + LGGG                  + ++  
Sbjct: 224 TSVEPYLSAVRRIAALMAGLHGQHGLVLPELDLGGGHGIAYRPGEPALDPTTLAREVRTE 283

Query: 222 SEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYL 273
                        ++ +EPG AI          VL +     +  V VD  +  +    L
Sbjct: 284 LTGACAAAGLPVPRLIIEPGRAIAGPAGIALYRVLAVKRTGERTYVAVDGGMSDNPRPAL 343

Query: 274 LYQESATI----YPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNI 328
                A           P    V GR C AGD+          V+ GD ++      Y++
Sbjct: 344 YGVRYAPCLIGRRTTAEPALVTVVGRHCEAGDVLAADVELPADVRPGDLLAVPAAGAYHL 403

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           +  + +N +  P +A          +R  S +D  + 
Sbjct: 404 SMASGYNLVGRPPVAAVRDGRARLLVRRESLDDIRSR 440


>gi|228957795|ref|ZP_04119536.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228801877|gb|EEM48753.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 438

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 60/400 (15%), Positives = 122/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 30  GTPLYVYDEESIRGKCQAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+       F      ++   K  E    A+ +N    + +   +L    D A +    
Sbjct: 90  GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFFELEVLHDLAMQHGKF 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G    +          ++    NV G+  H  
Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIGFALQKSNYNVLGIHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F   ++ + +       Q    ++ +++GGG      +              
Sbjct: 210 SQIFETAGFVRAIEVLRQFLEEVREQTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +      E    +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 270 TSAVREQFTLCEYPLPEIWIEPGRSIVGDAGTTIYTVGSVKDIPGIRKYVSVDGGMTDNL 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +       + G+ C +GD+         V   D ++      
Sbjct: 330 RPALYNARYEAMLANRANDENEELVSIAGKCCESGDMLIWDIHLPKVAASDLLAVSCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGN 429


>gi|300214689|gb|ADJ79105.1| Diaminopimelate decarboxylase [Lactobacillus salivarius CECT 5713]
          Length = 430

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 66/400 (16%), Positives = 130/400 (32%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D  K+   +       +   VK  +  A K F++  M+D + +   G+   S 
Sbjct: 28  GTPTIVYDVAKIKEQIAKFKAGFEEENVKYHISYASKAFSSLAMYDLVAKSGIGSDVVSG 87

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK- 116
            E+    +     +   ++   K      +   SN   II +   +++   +   + +K 
Sbjct: 88  GELYAALKGGMDPQELEFHGNNKSRAELEMAVDSNIGYIIVDNFYEIDLLNEVLTEKNKT 147

Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I LR+ P +           +  S+ G         E  +  + +    V G+  H  
Sbjct: 148 ADILLRLAPGIHAETHEYISTGQAKSKFGFDLQSGQASEALEKTLANPRFKVLGVHSHIG 207

Query: 167 CEN----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK--------DF 214
            +             ++  +      +    E ++LGGG      D              
Sbjct: 208 SQIFATTGFVEAAKKLMDFLSAWKEKYDFTAEVLNLGGGFGIRYTDQDEPLDVKDFVKII 267

Query: 215 CQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            + +KE S++ +  I   ++EPG ++V        TV    +       V     +  ++
Sbjct: 268 VEAVKEKSKELNYPIPAIWIEPGRSVVGEAGVSLYTVGSRKDVEGVGSFVAVDGGMGDNI 327

Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   E   +            A + G+ C +GDI  + +     + GD I+      
Sbjct: 328 RPALYGAEYDAVLAKDPNAPIAQNASIVGKFCESGDILIKDYDFPKTEPGDVIAMLSTGA 387

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y     + +N    P I           ++  SY D   N
Sbjct: 388 YGYVMASNYNRNPRPAIVFVEDGKARLVVKRESYEDMIRN 427


>gi|293571376|ref|ZP_06682406.1| diaminopimelate decarboxylase [Enterococcus faecium E980]
 gi|291608515|gb|EFF37807.1| diaminopimelate decarboxylase [Enterococcus faecium E980]
          Length = 419

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 61/394 (15%), Positives = 129/394 (32%), Gaps = 33/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           +TP Y+ D++K+   + +       K+   K+L A K F    M   +++Y  G    S 
Sbjct: 19  QTPLYVYDEEKMRQTMLSFKRGFVSKHFDTKVLYASKAFQTIEMLRLVHEYGFGLDVVSG 78

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKA--QKLH 115
            E+    +  F  +   ++   K  E        +   ++ + + ++   ++ +      
Sbjct: 79  GEIYTALQADFPRDAIYFHGNNKTPEELIYALENELLHVVADNLMEVELLEELSQRYSKK 138

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
             + LR+N  V              S+ G   +            ES    + G   H  
Sbjct: 139 VDVMLRLNVGVEAHTHEYIVTAHIDSKFGMSYESKECQQALQLIKESSYLELEGFHAHIG 198

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226
            +      + A +  +      F   +  ++LGGG              +   +   +Y+
Sbjct: 199 SQIFDVTAWLAEIDKLTSYLTDFEQPLS-LNLGGGFGIRYTQNDQPIPIEEALKKLIEYT 257

Query: 227 -----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL 274
                       Q+ +EPG +IV    T   T+  I +         D  +  ++   L 
Sbjct: 258 EEALDKRKLTIRQLLIEPGRSIVGEAGTTLYTIGFIKKTPHKKYYFVDGGMTDNIRPALY 317

Query: 275 YQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                   A            + G+ C +GD+  +  +    K GD ++      Y  + 
Sbjct: 318 QAAYDCDLAEKLSEEKTEKVTIAGKMCESGDVVIKETYLPKAKSGDLLAVYSTGAYGYSM 377

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            + +N    P +   N   +   +R  +++D   
Sbjct: 378 SSNYNRATRPAVVFVNNGQSRLVVRRQAFSDLLR 411


>gi|47093381|ref|ZP_00231148.1| diaminopimelate decarboxylase [Listeria monocytogenes str. 4b
           H7858]
 gi|47018252|gb|EAL09018.1| diaminopimelate decarboxylase [Listeria monocytogenes str. 4b
           H7858]
          Length = 428

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 56/404 (13%), Positives = 127/404 (31%), Gaps = 39/404 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   + +         +  GVK  +  A K F+A  ++  + +        S 
Sbjct: 24  GTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSG 83

Query: 61  YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E   ++   K  +    A+       + +   +++  +D   + ++K
Sbjct: 84  GELYTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVIDNYYEISLLEDILIERNEK 143

Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHN 165
             + +R+ P +           +  S+ G    +             S   ++ GL  H 
Sbjct: 144 ASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHI 203

Query: 166 NCENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK-DFCQRLKE 220
             +      F    + I  +   +        + ++LGGG            +  + +++
Sbjct: 204 GSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQ 263

Query: 221 FSEK----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268
             ++             +I++EPG ++V    T    V    E       +     +  +
Sbjct: 264 IMDEVRDVANNNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDN 323

Query: 269 VPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
           +   L       +           T  + G+ C +GD+            G+ ++     
Sbjct: 324 IRPALYDAHYDAVLAANPEKVAEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTG 383

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367
            Y     + +N I  P++           +   +Y +   N LS
Sbjct: 384 AYGYAMASNYNRIPRPSVVFVENGVDKLIVARETYENLVQNDLS 427


>gi|227893383|ref|ZP_04011188.1| diaminopimelate decarboxylase [Lactobacillus ultunensis DSM 16047]
 gi|227864798|gb|EEJ72219.1| diaminopimelate decarboxylase [Lactobacillus ultunensis DSM 16047]
          Length = 437

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 65/398 (16%), Positives = 126/398 (31%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D +++ + +     + +  GVK  +  A K F+   M+    Q    T   S 
Sbjct: 31  GTPLIVYDVEQIRHQIRAFKKVFEEEGVKYAVSYASKAFSCVAMYQVAEQEGAYTDVVSA 90

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+    +  F  E  +++   K      +    +   II +   ++         Q   
Sbjct: 91  GELYTALKTNFPVEHISFHGNNKSLAELEMAVKHHVGKIIIDNFHEIKLLDQVLKEQNAK 150

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             + LRI P +S          +  S+ G            +  + +   N+ G+  H  
Sbjct: 151 IDVMLRITPGISADTHEYDQTGQVDSKFGFDLESGQADLALEQVLNNSRMNLVGIHAHIG 210

Query: 167 CENKSFLCFSAM----LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F       ++  E     +    + I++GGG                     
Sbjct: 211 SQIFELNGFEMAAKKLMEVAENWRNQYGYTAKVINVGGGFGIKYTAEDNPLRPEKFVQAI 270

Query: 215 CQRLKEFSEKYSVQIY---LEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHV 269
            + +K  +E+ S  +    +EPG +IV        T     +    +  V VD  +  ++
Sbjct: 271 VETIKTEAERASFPVPEIDIEPGRSIVGPAGYNLYTTGSRKVIPGHRPYVAVDGGMGDNI 330

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +  ++              + G+ C +GDI  E       K G  I+  D   
Sbjct: 331 RPALYQAKYESVLASDPQAPSTEHVRIAGKYCESGDILAEDQALPVTKAGSLIAMLDTGA 390

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
           Y  +  + +N    P +           I+  S  D  
Sbjct: 391 YGYSMASNYNRNPRPAVVFAEKGKAKVVIKRESLEDLV 428


>gi|47097095|ref|ZP_00234665.1| diaminopimelate decarboxylase [Listeria monocytogenes str. 1/2a
           F6854]
 gi|47014540|gb|EAL05503.1| diaminopimelate decarboxylase [Listeria monocytogenes str. 1/2a
           F6854]
          Length = 428

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 55/404 (13%), Positives = 126/404 (31%), Gaps = 39/404 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   + +         +  GVK  +  A K F+A  ++  + +        S 
Sbjct: 24  GTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSG 83

Query: 61  YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E   ++   K  +    A+       + +   +++  +D   + ++K
Sbjct: 84  GELYTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVIDNYYEISLLEDILIERNEK 143

Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHN 165
             + +R+ P +           +  S+ G    +             S   ++ GL  H 
Sbjct: 144 ASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHI 203

Query: 166 NCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-DFCQRLKE 220
             +      F      ++  + +         + ++LGGG            +  + +++
Sbjct: 204 GSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQ 263

Query: 221 FSEK----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268
             ++             +I++EPG ++V    T    V    E       +     +  +
Sbjct: 264 IMDEVRDVAESNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDN 323

Query: 269 VPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
           +   L       +           T  + G+ C +GD+            G+ ++     
Sbjct: 324 IRPALYDAHYDAVLAANPEKVAEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTG 383

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367
            Y     + +N I  P +           +   +Y +   N LS
Sbjct: 384 AYGYAMASNYNRIPRPPVVFVENGVDKLIVARETYENLVQNDLS 427


>gi|167629948|ref|YP_001680447.1| diaminopimelate decarboxylase [Heliobacterium modesticaldum Ice1]
 gi|167592688|gb|ABZ84436.1| diaminopimelate decarboxylase [Heliobacterium modesticaldum Ice1]
          Length = 437

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 64/399 (16%), Positives = 115/399 (28%), Gaps = 36/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV-KLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            +P Y++D+  L  N          +G  ++L A K F    M   + Q   G    S  
Sbjct: 30  GSPLYVMDEAHLRENCRKYYQAFSASGAGEVLFASKAFMTMAMCRLVEQEGLGLDVVSGG 89

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116
           E+       F  E   ++   K       A+      I+ + + + +     A       
Sbjct: 90  ELYTARRAGFPMEKVYFHGNNKTPAELRQAIEYGVGHIVVDNLYEADLLNAIAGETGALV 149

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCK--DKIESEIKNVN-------GLMFHNNC 167
           ++ LRI P +           +  S+ G        +      +        GL  H   
Sbjct: 150 RVLLRITPGIDCHTHEFVRTGQIDSKFGFTLPTGQALAGVKAVLERGNLIYDGLHCHIGS 209

Query: 168 ENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS- 222
           +      F    + +             +   ++LGGG      +               
Sbjct: 210 QIFELESFGYAAEVMMTFIDEIRRETGVETAILNLGGGFGIRYTEADTPGDVAEYARIVL 269

Query: 223 ----------EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVP 270
                        + ++ +EPG +IV    T   TV  + E I     V     +  +  
Sbjct: 270 SAVALEAEKRGLPTPKVLVEPGRSIVATAGTTLYTVGSVKEIIGVRKYVAVDGGMTDNPR 329

Query: 271 DYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
             L      ++  N           V G+ C +GD+         V+ GD ++      Y
Sbjct: 330 PALYGSRYESMLANKATQEPEEVVSVTGKCCESGDMLLWDVSLPKVESGDILAVSCTGAY 389

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           N      +N I  P +           +   S +D   N
Sbjct: 390 NYTMSMNYNRIGRPAVVFVRDGKAAVVVERESLDDLIRN 428


>gi|29829461|ref|NP_824095.1| diaminopimelate decarboxylase [Streptomyces avermitilis MA-4680]
 gi|29606569|dbj|BAC70630.1| putative diaminopimelate decarboxylase [Streptomyces avermitilis
           MA-4680]
          Length = 463

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 64/398 (16%), Positives = 122/398 (30%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y +D+                    +  A K F +  +   L++        S  E
Sbjct: 63  GTPGYFLDEADFRERARAWRTAF-GHDADVFYAGKAFLSRAVVRWLHEEGLNLDVCSGGE 121

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +          +  A++   K  E    AV +    I+ ++  ++ +    AQ L K+  
Sbjct: 122 LATALSAGMPADRIAFHGNNKSEEEIRTAVEAGVGRIVLDSFQEIVRVAHIAQSLGKRQR 181

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168
             +R+   V               + G    D          +  +   + G+  H   +
Sbjct: 182 AQIRVTVGVEAHTHEFIATAHEDQKFGIGLADGQAAEAVRRALALDGLELVGIHSHIGSQ 241

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F      ++K + +       ++  I LGGG+               + +   +
Sbjct: 242 IFDMAGFEVAARRVVKLLAEVRDEHGVELPEIDLGGGLGIAYTSEDDPREPHEIAKALSE 301

Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271
                       + +I +EPG AIV  T      V  I      +  V VD  +  ++  
Sbjct: 302 IVTRECEAAKLRTPRISVEPGRAIVGPTAFTLYEVGTIKPLDGLRTYVSVDGGMSDNIRT 361

Query: 272 YLLYQESATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326
            L   E +        +  P    V G+ C +GDI  +  F    +  GD I+      Y
Sbjct: 362 ALYDAEYSVALVSRASDAEPMLVRVVGKHCESGDIVVKDAFLPADLAPGDLIAVPATGAY 421

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N    P +   +       +R  +  D   
Sbjct: 422 CRSMASNYNHALRPPVVAVHDGEARVIVRRETEEDILR 459


>gi|126176184|ref|YP_001052333.1| diaminopimelate decarboxylase [Shewanella baltica OS155]
 gi|160877194|ref|YP_001556510.1| diaminopimelate decarboxylase [Shewanella baltica OS195]
 gi|125999389|gb|ABN63464.1| diaminopimelate decarboxylase [Shewanella baltica OS155]
 gi|160862716|gb|ABX51250.1| diaminopimelate decarboxylase [Shewanella baltica OS195]
 gi|315269398|gb|ADT96251.1| diaminopimelate decarboxylase [Shewanella baltica OS678]
          Length = 414

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 60/382 (15%), Positives = 109/382 (28%), Gaps = 23/382 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  A   + + L +   G    S  E
Sbjct: 26  GTPLYIYSRATLERHWHAFNNAVADHPHLICYAVKANANLAVLNVLARLGSGFDIVSGGE 85

Query: 63  VMLGHE-KFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +    E         ++   K       A+          + ++L      A +L K   
Sbjct: 86  LARVMEAGGDPAKVVFSGVGKTAAEMEQALNLGIYCFNVESSAELELLNLVAGRLGKVAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNC--- 167
           + LRINP V              ++ G    +               V G+  H      
Sbjct: 146 VSLRINPDVDAGTHPYISTGLKENKFGIAMDEAEIVFARAHALPHLKVKGVDCHIGSQLT 205

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
           E K FL     +  +          IE   +GGG+  T           +   +      
Sbjct: 206 EIKPFLDAMDRMLALIDRLAEQGIVIEHFDVGGGLGVTYDAETPPHPDVYAAAILARLGD 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQE---SAT 280
             +++  EPG AI  N     T VL +   + K   IVD ++   +   L          
Sbjct: 266 RQLKLIFEPGRAIAANAGIFVTQVLYLKENSDKRFAIVDGAMNDLIRPALYSAWQNIIPV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
           +  ++  Y   + G  C  GD  G+            ++      Y     + +N     
Sbjct: 326 VPRDSEAYEFDIVGPVCETGDFLGKNRQLALAAGD-LLAVRSSGAYGFAMASNYNTRPRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDY 362
              + + +           +  
Sbjct: 385 AEVMVDGEQAFLVREREKLSQL 406


>gi|229149719|ref|ZP_04277949.1| Diaminopimelate decarboxylase [Bacillus cereus m1550]
 gi|228633750|gb|EEK90349.1| Diaminopimelate decarboxylase [Bacillus cereus m1550]
          Length = 438

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 60/400 (15%), Positives = 122/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 30  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREESMSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+       F      ++   K  E    A+ +N    + +   +L    D A +    
Sbjct: 90  GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFFELEVLHDLAMQHGKF 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G    +          ++    NV G+  H  
Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIGFALQKSNYNVLGIHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F   ++ + +       Q    ++ +++GGG      +              
Sbjct: 210 SQIFETAGFVRAIEVLRQFLEEVREQTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +      E    +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 270 TSAVREQFTVCEYPLPEIWIEPGRSIVGDAGTTIYTVGSVKDIPGIRKYVSVDGGMTDNL 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +       + G+ C +GD+         V   D ++      
Sbjct: 330 RPALYNARYEAMLANRANDENEELVSIAGKCCESGDMLIWDIHLPKVAASDLLAVSCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGN 429


>gi|329114281|ref|ZP_08243043.1| Diaminopimelate decarboxylase [Acetobacter pomorum DM001]
 gi|326696357|gb|EGE48036.1| Diaminopimelate decarboxylase [Acetobacter pomorum DM001]
          Length = 447

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 57/388 (14%), Positives = 115/388 (29%), Gaps = 27/388 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           + TP +++    L   +       ++AG  V +  A+K      +   + Q   G    S
Sbjct: 46  VGTPCWVLGAGTLRTRMRRMHAAMRDAGLDVSIHYAVKANDHLAILTLIGQEGFGADIVS 105

Query: 60  LYEVMLG-HEKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKL-- 114
             E+              ++   K       A+      I   +  +L      A KL  
Sbjct: 106 GGELARAIKAGIPASRIVFSGVGKTDAELEQAISHGIGQINVESAEELEAISAIATKLGK 165

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNC 167
              I LRINP V              ++ G   +D                 G   H   
Sbjct: 166 QATITLRINPDVDAKTHAKITTGLAANKFGIPFQDAAALYAHAFTLSGVRPVGFATHIGS 225

Query: 168 ENKSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEF 221
           +  +   + A    +    +        +  +  GGG+    ++            +K  
Sbjct: 226 QILTTTPYRAAYARVAELVRSVRAAGNAVSVVDCGGGLGICYRNETEGQPEALAGAIKAE 285

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV--DSSVEAHVPDYLLYQESA 279
                V++ +EPG   +     L ++V+   E   ++  +  D+++   +   +      
Sbjct: 286 LGDLGVKLAIEPGRWPIGPAGVLLSSVILRKEQGMDVPFLVLDTAMNELLRPSMYDAWHG 345

Query: 280 TIYPNTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
            +      ++     A V G  C +GD F       P+    RI+  D   Y     + +
Sbjct: 346 ILPLAPQAFSQPVSLAHVVGPVCESGDTFARDRLLPPLARNARIALLDTGAYGAVMSSTY 405

Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDY 362
           N   +    +          +  S  + 
Sbjct: 406 NSRPLAAEVLVEDGQWQVIRQRQSVEEL 433


>gi|53803251|ref|YP_114999.1| carboxynorspermidine decarboxylase [Methylococcus capsulatus str.
           Bath]
 gi|53757012|gb|AAU91303.1| carboxynorspermidine decarboxylase [Methylococcus capsulatus str.
           Bath]
          Length = 375

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 104/371 (28%), Positives = 183/371 (49%), Gaps = 12/371 (3%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           M +TP ++ D+  +   L T       +G +LL ++K F    +   +   +DG ++SSL
Sbjct: 1   MPETPAFVYDQTAIDRTLSTFEEAAAGSGPRLLYSVKSFPFLPLLRRIAPRVDGLSASSL 60

Query: 61  YEVMLGHEKFGGE--THAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           +E  L  E   G    H     ++  EID +   CD + FN++ Q +++  +  +    +
Sbjct: 61  FEARLCAEALAGRGGLHITTPGFRPGEIDEIGRLCDFVSFNSLEQFDRWSAR-MEGTASV 119

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI---KNVNGLMFHNNCENKSFLCF 175
           GLR+NP +S++     DP RP S+LG      + +E+   + + G+ FH   +  SF   
Sbjct: 120 GLRVNPQLSFAPDPRYDPCRPHSKLGVPLDRLVPAEVGRLERLEGIHFHTVFDCASFEPL 179

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
           + +L  +E + G  + ++ W++LGGG      +  +             Y +++Y EPG+
Sbjct: 180 AEILAKLENKLGERLKRLRWLNLGGGY---RLEGDLGRLAGFSTRLQRDYGLEVYFEPGK 236

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAMVC 293
           A++ +   L  +V+D+  +    V V  S   H P+   YQ S  +      G  TA++ 
Sbjct: 237 AVIGSAGYLVASVIDVFNSGGKTVAVLDSSINHHPEVFEYQRSPRLAEVCEEGRETAILA 296

Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353
           G +CLAGD+FGE+      +IGDR+ FEDV  Y + + N FNG N+P+I   + +  +  
Sbjct: 297 GGTCLAGDLFGEYALPTRPRIGDRLVFEDVGAYTLVKANRFNGHNLPSIYRWDGE-ALHL 355

Query: 354 IREFSYNDYYN 364
            + + Y DY  
Sbjct: 356 EQSYGYEDYRR 366


>gi|134301078|ref|YP_001114574.1| Orn/DAP/Arg decarboxylase 2 [Desulfotomaculum reducens MI-1]
 gi|134053778|gb|ABO51749.1| diaminopimelate decarboxylase [Desulfotomaculum reducens MI-1]
          Length = 421

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 68/393 (17%), Positives = 121/393 (30%), Gaps = 30/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +  N        + N G K   A+K      + + L +   G   SSL 
Sbjct: 19  PTPFHLYDERGIRENARRLKKAFQWNKGFKEYFAVKATPNPAILNILKEEGCGADCSSLT 78

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+ML     F GE   ++       +          I F+ ++ ++ FK  A+     I 
Sbjct: 79  ELMLAEAVGFAGEEIMFSSNVTPAEDFICANKLQAIINFDDITHIDFFKQIAEMPET-IS 137

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFH------NNCEN 169
           LR NP   +            ++ G       E+        V     H           
Sbjct: 138 LRYNPGGDFKISNAIMDKPGEAKYGLTRSQLTEAIKKLQLYGVKHFGLHAFLASNTTTNE 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                   + K   +        I +I+L GG+    +          + E  ++   + 
Sbjct: 198 YYPELAKILFKTAVELNDETGAHISFINLSGGVGIPYQPEQQPADIMAIGEGVKQAYAEV 257

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     IY E G  ++     L  T L      K+ + +D+     +   +     
Sbjct: 258 LLPAGMDDVAIYTELGRFMLGPYGCLVATALHEKHIHKDYIGLDACAANLMRPAMYGSYH 317

Query: 279 ATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   + G  C   D F        + IGD +   D   +       +
Sbjct: 318 HITVMGKENQPCDHKYDITGGLCENNDKFAIDRMLPKIDIGDLLVIHDTGAHGFAMGYNY 377

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       +   DG+ + IR   +  DY+  L
Sbjct: 378 NGKLRSAEILLKEDGSTQLIRRAETPADYFATL 410


>gi|217975044|ref|YP_002359795.1| diaminopimelate decarboxylase [Shewanella baltica OS223]
 gi|217500179|gb|ACK48372.1| diaminopimelate decarboxylase [Shewanella baltica OS223]
          Length = 414

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 60/382 (15%), Positives = 110/382 (28%), Gaps = 23/382 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  A   + + L +   G    S  E
Sbjct: 26  GTPLYIYSRATLERHWHAFNNAVADHPHLICYAVKANANLAVLNVLARLGSGFDIVSGGE 85

Query: 63  VMLGHE-KFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +    E         ++   K       A+          + ++L +    A +L K   
Sbjct: 86  LARVMEAGGDPAKVVFSGVGKTAAEMEQALNLGIYCFNVESSAELEQLNLVAGRLGKVAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNC--- 167
           + LRINP V              ++ G    +               V G+  H      
Sbjct: 146 VSLRINPDVDAGTHPYISTGLKENKFGIAMDEAEIVFARAHALPHLKVKGVDCHIGSQLT 205

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
           E K FL     +  +          IE   +GGG+  T           +   +      
Sbjct: 206 EIKPFLDAMDRMLALIDRLAEQGIVIEHFDVGGGLGVTYDAETPPHPDVYAAAILARLGD 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQE---SAT 280
             +++  EPG AI  N     T VL +   + K   IVD ++   +   L          
Sbjct: 266 RQLKLIFEPGRAIAANAGIFVTQVLYLKENSDKRFAIVDGAMNDLIRPALYSAWQNIIPV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
           +  ++  Y   + G  C  GD  G+            ++      Y     + +N     
Sbjct: 326 VPRDSEAYEFDIVGPVCETGDFLGKNRQLALAAGD-LLAVRSSGAYGFAMASNYNTRPRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDY 362
              + + +           +  
Sbjct: 385 AEVMVDGEQAFLVREREKLSQL 406


>gi|229160470|ref|ZP_04288465.1| Diaminopimelate decarboxylase [Bacillus cereus R309803]
 gi|228622880|gb|EEK79711.1| Diaminopimelate decarboxylase [Bacillus cereus R309803]
          Length = 438

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 62/400 (15%), Positives = 124/400 (31%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 30  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F      ++   K  E    A+ +N    + +   +L    D A +  K 
Sbjct: 90  GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 149

Query: 118 IGL--RINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           + +  R+ P V           +  S+ G         +  +  ++    NV G+  H  
Sbjct: 150 VNIIIRVTPGVEAHTHEYITTGQEDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F   ++ + +       Q    ++ +++GGG      D              
Sbjct: 210 SQIFETAGFVRAIEVLRQFLEEVREQTNYVVKVLNVGGGFGIRYTDSDTPLTLETYVRAV 269

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +           +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 270 TSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 329

Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +  N G         + G+ C +GD+         V   D ++      
Sbjct: 330 RPALYNARYEAMLANRGDDANEELVSIAGKCCESGDMLIWDIHLPKVASSDLLAISCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQIVVERETYENIIGN 429


>gi|152974944|ref|YP_001374461.1| diaminopimelate decarboxylase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152023696|gb|ABS21466.1| diaminopimelate decarboxylase [Bacillus cytotoxicus NVH 391-98]
          Length = 438

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 63/400 (15%), Positives = 121/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D+  +  N     +  + +G   ++  A K F    M     +        S 
Sbjct: 30  GTPLYVYDETAIRENCRAFHHAFQKSGFSYQVAYASKAFLCMEMCRVALEENMSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F      ++     ++    A+ +N    + +   +L    D A   K  
Sbjct: 90  GELYTALQAGFPASRIHFHGNNKTEEEMRMALEANIGCFVVDNFFELEVLHDLAEQYKKM 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G            +  +E    NV G+  H  
Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQALHAMERALEKTNYNVLGIHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEF- 221
            +      F   ++ +              I  +++GGG      +       +   +  
Sbjct: 210 SQIFETAGFIRAIEVLHHFLEGVKTKTGYTISVLNVGGGFGIRYTESDTPLTLEAYVQAV 269

Query: 222 ----------SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
                      E    +I++EPG +IV +  T   TV  I         V     +  ++
Sbjct: 270 TDAVRERFTACEYPLPEIWIEPGRSIVGDAGTTIYTVGAIKNIPGIRKYVSVDGGMTDNL 329

Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +  N           + G+ C +GD+     +   V   D ++      
Sbjct: 330 RPALYGARYEAMLANRANVANEEVVSIAGKCCESGDMLIWDVYLPQVVSSDLLAVSCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   SY +   N
Sbjct: 390 YGYSMANNYNRIRRPAVVFAKDGTSQVVVERESYENIIGN 429


>gi|75760421|ref|ZP_00740464.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|218896450|ref|YP_002444861.1| diaminopimelate decarboxylase [Bacillus cereus G9842]
 gi|228900100|ref|ZP_04064333.1| Diaminopimelate decarboxylase [Bacillus thuringiensis IBL 4222]
 gi|228964487|ref|ZP_04125599.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|74492100|gb|EAO55273.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|218544631|gb|ACK97025.1| diaminopimelate decarboxylase [Bacillus cereus G9842]
 gi|228795189|gb|EEM42683.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228859506|gb|EEN03933.1| Diaminopimelate decarboxylase [Bacillus thuringiensis IBL 4222]
          Length = 438

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 60/400 (15%), Positives = 122/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 30  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+       F      ++   K  E    A+ +N    + +   +L    D A +    
Sbjct: 90  GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFFELEILHDLAMQHGKF 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G    +          ++    NV G+  H  
Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIGFALQKSNYNVLGIHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F   ++ + +       Q    ++ +++GGG      +              
Sbjct: 210 SQIFETAGFVRAIEVLRQFLEEVREQTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +      E    +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 270 TSAVREQFTVCEYPLPEIWIEPGRSIVGDAGTTIYTVGSVKDIPGIRKYVSVDGGMTDNL 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +       + G+ C +GD+         V   D ++      
Sbjct: 330 RPALYSARYEAMLANRGNDENEELVSIAGKCCESGDMLIWDIHLPKVASADLLAVSCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGN 429


>gi|229029197|ref|ZP_04185290.1| Diaminopimelate decarboxylase [Bacillus cereus AH1271]
 gi|228732105|gb|EEL82994.1| Diaminopimelate decarboxylase [Bacillus cereus AH1271]
          Length = 449

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 58/400 (14%), Positives = 120/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 41  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 100

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F      ++   K  E    A+ +N    + +   +L    D A      
Sbjct: 101 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFLELEILHDLAGQHGKF 160

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G         +  +  ++    NV G+  H  
Sbjct: 161 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 220

Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F   ++ + +            ++ +++GGG      +              
Sbjct: 221 SQIFETAGFVRAIEVLHQFLEEVRERANYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 280

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +           +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 281 TSAVREQFTACNYPLPEIWVEPGRSIVGDAGTTIYTVGSVKDIPGIRKYVSVDGGMTDNL 340

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +       + G+ C +GD+         V   D ++      
Sbjct: 341 RPALYNARYEAMLANRGNDENEEVVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 400

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 401 YGYSMANNYNRIRRPAVVFAKGGTSQIVVERETYENIIGN 440


>gi|257897662|ref|ZP_05677315.1| diaminopimelate decarboxylase [Enterococcus faecium Com15]
 gi|257835574|gb|EEV60648.1| diaminopimelate decarboxylase [Enterococcus faecium Com15]
          Length = 419

 Score =  215 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 62/394 (15%), Positives = 130/394 (32%), Gaps = 33/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           +TP Y+ D++K+   + +       K+   K+L A K F    M   +++Y  G    S 
Sbjct: 19  QTPLYVYDEEKMRQTMLSFKRGFVSKHFDTKVLYASKAFQTIEMLRLVHEYGFGLDVVSG 78

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKA--QKLH 115
            E+    +  F  +   ++   K  E        +   ++ + + ++   ++ +      
Sbjct: 79  GEIYTALQADFPRDAIYFHGNNKTPEELIYALENELLHVVADNLMEVELLEELSQRYSKK 138

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
             + LR+N  V           R  S+ G   +            ES    + G   H  
Sbjct: 139 VDVMLRLNVGVEAHTHEYIVTARIDSKFGMSYESKECQQALQLIKESSYLELEGFHAHIG 198

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226
            +      + A +  +      F   +  ++LGGG              +   +   +Y+
Sbjct: 199 SQIFDVTAWLAEIDKLTSYLTDFEQPLS-LNLGGGFGIRYTQNDQPIPIEEALKKLIEYT 257

Query: 227 -----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL 274
                       Q+ +EPG +IV    T   T+  I +         D  +  ++   L 
Sbjct: 258 EEALDKRKLTIRQLLIEPGRSIVGEAGTTLYTIGFIKKTPHKKYYFVDGGMTDNIRPALY 317

Query: 275 YQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                   A            + G+ C +GD+  +  +    K GD ++      Y  + 
Sbjct: 318 QAAYDCDLAEKLSEEKTEKVTIAGKMCESGDVVIKETYLPKAKSGDLLAVYSTGAYGYSM 377

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            + +N    P +   N   +   +R  +++D   
Sbjct: 378 SSNYNRATRPAVVFVNNGQSRLVVRRQAFSDLLR 411


>gi|326202543|ref|ZP_08192411.1| diaminopimelate decarboxylase [Clostridium papyrosolvens DSM 2782]
 gi|325987127|gb|EGD47955.1| diaminopimelate decarboxylase [Clostridium papyrosolvens DSM 2782]
          Length = 416

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 60/392 (15%), Positives = 114/392 (29%), Gaps = 32/392 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+ +++ L         +          ++K  +   +   + +      + S  E
Sbjct: 25  GSPLYVYNEKILRQKCRDMKNLVDYKNFIPNYSIKANSNLTVLKIVKEEGLRADAMSAGE 84

Query: 63  V-MLGHEKFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           + +L H  F  E   +      + E+   + N   +  +++SQL            K  +
Sbjct: 85  IQLLLHAGFKPENLFFVPNNVSEAELKYAVENGVLVSVDSLSQLEILGKI--NQGGKAAV 142

Query: 121 RINPSVSYSKFILADPNRPFSRLGE------KCKDKIESEIKNVNGLMFHNNCENKSFLC 174
           R NP V              ++ G       + K   +     + G+  H          
Sbjct: 143 RFNPGVGAGHHEKVVTAGKKTKFGVNIDCVNEVKAIAKKYNMKICGVNQHIGS-LFMEGD 201

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR----------LKEFSEK 224
                             I+++ +GGG     K    ++              L+++++K
Sbjct: 202 SYIEGVKSLLAVAEQFEDIDFVDMGGGFGIPYKKQEGQEPLDLASFKEKLTQVLEQWTDK 261

Query: 225 YSVQIYL--EPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATI 281
           Y  +I    EPG  IV  +  L   V           V  D          +        
Sbjct: 262 YGKKILFKTEPGRYIVAESGVLLGNVYATKANYGNKYVGTDIGFNVLARPVMYDSHHDIE 321

Query: 282 YPNTGP-------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
               G            V G  C +GDI  +      +  GD +   D   Y     + +
Sbjct: 322 VYRNGNPLNDSEVEEVTVVGNICESGDIIAKNRELPVINQGDILGIMDAGAYGFAMSSNY 381

Query: 335 NGINMPTIAVKNVDGT-IKAIREFSYNDYYNN 365
           N    P   +   DG  +   R  ++ D   N
Sbjct: 382 NMRLRPAEVLIKEDGEPVLIRRRDTFEDLIAN 413


>gi|255280715|ref|ZP_05345270.1| diaminopimelate decarboxylase [Bryantella formatexigens DSM 14469]
 gi|255268652|gb|EET61857.1| diaminopimelate decarboxylase [Bryantella formatexigens DSM 14469]
          Length = 422

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 56/392 (14%), Positives = 111/392 (28%), Gaps = 31/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP Y+ +++ L         +       +  + K  +       +        + S  E
Sbjct: 28  QTPLYVYNERILRQRCRDLKNMVTYPKFVVDYSAKANSNLAFLQVVKSEGLEVDAMSPGE 87

Query: 63  VMLGHE-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           + +     F  E   Y        E+   +     +  +++SQL +F   A     ++ +
Sbjct: 88  IYVERAAGFAPEEIFYIGNNVSAEEMQYAIDAGVRVSVDSLSQLEQFGQLA--PGGEVAI 145

Query: 121 RINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSFLC 174
           R NP V              ++ G +       ++ +E     + G+  H          
Sbjct: 146 RFNPGVGAGHHEKVITAGKKTKFGIEPKYIPQIRELLEKYHLKLVGINQHIGS-LFMTGE 204

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF-----------CQRLKEFSE 223
                     E      ++E+I +GGG     K    +                 K   E
Sbjct: 205 AFTASIAALLEIAKQFPELEFIDMGGGFGIPYKKEEDQAPLDLKGLGAAIDEALWKFTRE 264

Query: 224 KYSVQIY-LEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATI 281
                 + +EPG  I    + + + V  +  N     +  D          +        
Sbjct: 265 YGREVTFRIEPGRYISAECSVILSEVHSVKHNNDKKFVGCDCGFNVLQRPIMYDSYHGIE 324

Query: 282 YPN------TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                           V G  C +GDI  +      +  GD +   D   Y     + +N
Sbjct: 325 VYRGSEVKSEKTEPVTVVGNICESGDILAKDRVLPEIFKGDILGILDAGAYGFTMASNYN 384

Query: 336 GINMPTIAVKNVDGTIKAIR-EFSYNDYYNNL 366
               P   +   +G +  IR      D   ++
Sbjct: 385 NRLRPAEVMLRENGEVVLIREREELEDLLRHM 416


>gi|42780616|ref|NP_977863.1| diaminopimelate decarboxylase [Bacillus cereus ATCC 10987]
 gi|42736536|gb|AAS40471.1| diaminopimelate decarboxylase [Bacillus cereus ATCC 10987]
          Length = 438

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 58/400 (14%), Positives = 120/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 30  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F      ++   K  E    A+ +N    + +   +L    D A      
Sbjct: 90  GELYTALQAGFPASRIHFHGNNKTDEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G         +  +  ++    NV G+  H  
Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F   ++ + +            ++ +++GGG      +              
Sbjct: 210 SQIFETAGFVRAIEVLHQFLEEVRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +           +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 270 TSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +       + G+ C +GD+         V   D ++      
Sbjct: 330 RPALYNARYEAMLANRGNDENEEVVSIAGKCCESGDMLIWDINLPKVASADLLAISCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQIVVERETYENIIGN 429


>gi|241896460|ref|ZP_04783756.1| diaminopimelate decarboxylase [Weissella paramesenteroides ATCC
           33313]
 gi|241870440|gb|EER74191.1| diaminopimelate decarboxylase [Weissella paramesenteroides ATCC
           33313]
          Length = 438

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 63/395 (15%), Positives = 119/395 (30%), Gaps = 33/395 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           +TP Y+ D   +   + +   +   +     +  A K FA   M++   Q        S 
Sbjct: 38  QTPLYVYDVNHIRQQMRSFKEVFMNRQIDYVVSYASKAFATIAMYEVAAQEGIHLDVVSG 97

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       +     ++N   K  E   +   +   TII +   +L+   D    +   
Sbjct: 98  GEIQTALAANYPMSQVSFNGNNKSIEELEMAIDNGLGTIILDNFYELSVLHDLLSERDKT 157

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNN 166
           + + LRI P V           +  S+ G            +  I     NV G+  H  
Sbjct: 158 QDVLLRITPGVEAHTHDYISTGQTDSKFGFDVNSGQAYAALQKAIADPYLNVLGVSAHIG 217

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC----QRLKEFS 222
            +      F    + +      +    + I+ GGG                  + + +  
Sbjct: 218 SQIFDVTGFKMAAEKLVDLVHEWGFDPQVINTGGGFGIRYTADDKPLPATEFVEAIIDTI 277

Query: 223 EKY-------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDYL 273
            +           I++EPG AIV        T+    +         VD  +  ++   L
Sbjct: 278 TEKTTLYGMTMPAIWIEPGRAIVGPAGYNLYTIGSRKDVPGIRTYLSVDGGMGDNIRPAL 337

Query: 274 LYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
              +   I  N           V G+ C +GD+          K GD ++      Y  +
Sbjct: 338 YEAKYEAILANNPQAPTEEVVRVAGKYCESGDVLVWQQALPKTKPGDVLAVLATGAYGYS 397

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             + +N    P +       +   +   +Y D   
Sbjct: 398 MASNYNRNPRPAVVFVEGGQSQLVVERETYADMLR 432


>gi|297157206|gb|ADI06918.1| diaminopimelate decarboxylase [Streptomyces bingchenggensis BCW-1]
          Length = 463

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 61/398 (15%), Positives = 118/398 (29%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y +D+                A   +  A K F    +   LN+        S  E
Sbjct: 63  GTPGYFLDENDFRARCRAWREAF-GADADVFYAGKAFLCRAVVRWLNEEGLNLDVCSAGE 121

Query: 63  VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +          E  A +   K       AV +    I+ ++  ++ +    A++L K+  
Sbjct: 122 LATALGAGMPAERIALHGNNKSEAEIRRAVEAGVGRIVLDSFQEIVRVAHIAERLGKRQR 181

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
             +R+   V               + G            +  ++ +   + G+  H   +
Sbjct: 182 VQIRVTVGVEAHTHEFIATAHEDQKFGIPLAGGLAAEAVRRALKLDGLELIGVHSHIGSQ 241

Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYP----VKDFCQRLKE 220
                 F          +++       ++  I LGGG+                 + L++
Sbjct: 242 IFDTSGFEVAAHRVVGLLKEIRDEHGIELPEIDLGGGLGIAYTSEDDPSEPHQIAKALRD 301

Query: 221 FSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271
              +          ++ +EPG AI   TT     V  + E       V     +  ++  
Sbjct: 302 IVHRECEAAGLEVPRLSVEPGRAIAGPTTFTLYEVGTVKELPALRTYVSVDGGMSDNIRT 361

Query: 272 YLLYQESAT----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326
            L   E +           P  + V G+ C +GDI     F    +  GD I+      Y
Sbjct: 362 ALYDAEYSVALVSRISTAEPMLSRVVGKHCESGDIVVRDAFLPADLAPGDLIAVPATGAY 421

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N    P +         + +R  +  D   
Sbjct: 422 CRSMASNYNHALRPPVVAVKDGQAREIVRRETEEDLLR 459


>gi|329733442|gb|EGG69774.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           21193]
          Length = 421

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 63/394 (15%), Positives = 124/394 (31%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D+ ++   +       K++G+K  +  A K F    M   + +        S 
Sbjct: 26  GTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTCIQMVKLVAEEDLQLDVVSE 85

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    E  F      ++   K          +N    + +++ ++      A    + 
Sbjct: 86  GELYTALEAGFEPNRIHFHGNNKTKHEIRYALENNIGYFVIDSLEEIELIDRYANDTVQV 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + LR+NP V           +  S+ G                +S+   + G+  H   +
Sbjct: 146 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAKKAIDKVQQSKHLKLKGVHCHIGSQ 204

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
            +    F    K + +       Q+E ++LGGG      +       +   +        
Sbjct: 205 IEGTEAFIETAKIVLRWLKEQGIQVELLNLGGGFGIKYVEDDKSFPIESGIKDITDTIKS 264

Query: 229 IY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274
                        +EPG +IV         V  I E  +    V     +  H+   L  
Sbjct: 265 EIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKEIPEINKYVSIDGGMSDHIRTALYD 324

Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331
             YQ            +  + G+ C +GDI  +       VK GD ++      Y+ +  
Sbjct: 325 AKYQALLVNRNEEADDSVTIAGKLCESGDIIIKDAKLPSSVKRGDYLAILSTGAYHYSMA 384

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + +N +  P++         + I+  S      N
Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418


>gi|297154267|gb|ADI03979.1| diaminopimelate decarboxylase [Streptomyces bingchenggensis BCW-1]
          Length = 448

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 61/397 (15%), Positives = 130/397 (32%), Gaps = 36/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+ ++ +   T          ++L A K F    +   +++   G    S  E
Sbjct: 50  GTPVYVLDEAEVRDRCRTYRDAF--PDAEILYAAKAFLCQALVHWVDEEGLGLDVCSAGE 107

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA-QKLHKKI 118
           + L     F  E    +   K               I+ ++ S++ +         H+K+
Sbjct: 108 LELAVTAGFPPERIVLHGNAKSPRDLETALRLGVGRIVIDSPSEIARLAAAVGPDGHQKV 167

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCEN 169
            +R+ P +S              + G    D          ++     + GL  H   + 
Sbjct: 168 MVRVVPGISAGGHEKIRTGTDDQKFGLSISDGYAQHAIARILDQPQLELTGLQCHLGSQI 227

Query: 170 KSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEF 221
            S   +      M+  + +        +  + LGGG         +   +    ++++  
Sbjct: 228 TSVKPYLSAVRRMVGLMARLHEQHGLVLPELDLGGGHGIAYRPGEEALDLTTLARKVRME 287

Query: 222 SEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYL 273
             +          ++++EPG A+V         VL +    ++  + +D  +  +    L
Sbjct: 288 LVEACGAAGLTVPRLFIEPGRAVVGPAGVAVYRVLSVKHTGEHTYVAIDGGMSDNPRPSL 347

Query: 274 LYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNI 328
                            P    V GR C AGDI          +++GD ++      Y++
Sbjct: 348 YGVRYTPRLVGRHSTAEPTRVTVVGRHCEAGDILATAVELPGDIRLGDLLAVPVAGAYHL 407

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           +  + +N +  P +A          +R  S+ D    
Sbjct: 408 SMASAYNMVGRPPVAAVRDGRARLLVRRESFEDIRRR 444


>gi|229172157|ref|ZP_04299722.1| Diaminopimelate decarboxylase [Bacillus cereus MM3]
 gi|228611500|gb|EEK68757.1| Diaminopimelate decarboxylase [Bacillus cereus MM3]
          Length = 449

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 58/400 (14%), Positives = 119/400 (29%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 41  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 100

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F      ++   K  E    A+ +N    + +   +L    D A      
Sbjct: 101 GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 160

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G    +          ++    NV G+  H  
Sbjct: 161 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQVIEIALQKSNYNVLGIHSHIG 220

Query: 167 CEN----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF-------- 214
            +             + + +E+        ++ +++GGG      +              
Sbjct: 221 SQIFETAGFVRAIEVLRQFLEQVRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 280

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +           +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 281 TSAVREQFTVCNYPLPEIWVEPGRSIVGDAGTTIYTVGSVKDIPGIRKYVSVDGGMTDNL 340

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +       + G+ C +GD+         V   D ++      
Sbjct: 341 RPALYNARYEAMLANRGNDENEELVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 400

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 401 YGYSMANNYNRIRRPAVVFAKGGTSQIVVERETYENIIGN 440


>gi|170290535|ref|YP_001737351.1| diaminopimelate decarboxylase [Candidatus Korarchaeum cryptofilum
           OPF8]
 gi|170174615|gb|ACB07668.1| diaminopimelate decarboxylase [Candidatus Korarchaeum cryptofilum
           OPF8]
          Length = 383

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 68/368 (18%), Positives = 130/368 (35%), Gaps = 17/368 (4%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ID  ++  N        K   V +  A K      +   L +   G T  S + 
Sbjct: 16  GTPTYVIDLDRVKENYLRLDKAIKCPHV-IAYAYKANHEPELVKLLAKLGSGATVPSAFG 74

Query: 63  VMLGH-EKFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           V+L        E       +    ++   +     I   + SQ N  +         + +
Sbjct: 75  VILARISGVPPEKTVLVGPSPSRGDLIEAMDFGAIISIESHSQANALRSI---GRANVMV 131

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-----SEIKNVNGLMFHNNCENKSFLCF 175
           R+NP V    +         S+ G   ++ +       +     G   H   +  S   F
Sbjct: 132 RVNPGVGAGAYPGLVTGGKRSKFGLPPEEALSLFNSLKKDMRALGFHTHIGSQIFSTDPF 191

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKYSVQIYLE 232
            A L  I+         +E + LGGG+         +P++++ + + E   +   +++LE
Sbjct: 192 RAALDVIKGLAERVG-GVEIVDLGGGLGVPYSNESPFPLEEYAELVCERVREMGTKLFLE 250

Query: 233 PGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAM 291
            G  IV +   L + V  + E   +  +++D+ +   +   L       I    G    +
Sbjct: 251 TGRYIVADAGYLLSRVNYVKEVGGEKWLLIDAGMNDLIRPALYGARHEIICEGEGRERVL 310

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
           V G  C + D FGE+     +K GD I+F++   Y  +  + +N   +P +         
Sbjct: 311 VAGPVCESSDFFGEY-ELPKLKEGDLIAFKNAGAYGFSMASRYNLRPLPAVVGIEGGRFR 369

Query: 352 KAIREFSY 359
                  +
Sbjct: 370 LLRPREDF 377


>gi|332662084|ref|YP_004444872.1| diaminopimelate decarboxylase [Haliscomenobacter hydrossis DSM
           1100]
 gi|332330898|gb|AEE47999.1| diaminopimelate decarboxylase [Haliscomenobacter hydrossis DSM
           1100]
          Length = 409

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 59/384 (15%), Positives = 112/384 (29%), Gaps = 26/384 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+ + + +           +   +K+  A K      +   + Q        S+ E
Sbjct: 24  GSPLYVYEAETIERQYQRLKAAFQVEKLKISYACKALTNISILKFIKQLGSTIDCVSIQE 83

Query: 63  VMLG-HEKFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           V +     F      Y  +     EI+  ++    I  + +  + KF +     H  I +
Sbjct: 84  VQMALRAGFAPVDVLYTPSGVHFSEIEEAVALGVRINLDNIPAIEKFGEIY--PHIPICV 141

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKSFLC 174
           RINP +     +        S+ G   +        +E+    + GL  H   +  +   
Sbjct: 142 RINPHIMAGGNLKTSVGHIDSKFGISYQQMPLVQGILETTGMKLEGLHMHTGSDILNPDA 201

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
           F A   ++          +++I  G G     K   ++   + L E           E G
Sbjct: 202 FIA-GADVMLNLAKDYPDLDYIDFGSGFKVPYKPNDLETNIEELGEKLSAKFNTFCQEYG 260

Query: 235 EAIVT----------NTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL--YQESATI 281
            AI               +   TV  +          VDS +   +       Y   + +
Sbjct: 261 RAITMVFEPGKFLVSEAGSFLVTVNVVKHGVTTVFAGVDSGLNHLIRPMFYDAYHRISNL 320

Query: 282 YPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
               G   T  V G  C   D F        +  GD +   +   Y  +  + +N    P
Sbjct: 321 SNPEGKTQTYNVVGYICET-DTFATKREIPEIAPGDVLCMHNAGAYCYSMASNYNSRLRP 379

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              +             +  D + 
Sbjct: 380 AEVLIYQGKDFLIRERETIEDLFK 403


>gi|227903734|ref|ZP_04021539.1| diaminopimelate decarboxylase [Lactobacillus acidophilus ATCC 4796]
 gi|227868621|gb|EEJ76042.1| diaminopimelate decarboxylase [Lactobacillus acidophilus ATCC 4796]
          Length = 456

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 65/398 (16%), Positives = 125/398 (31%), Gaps = 38/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D  ++ N +     + +  GV   +  A K FA   M+   N+    T   S 
Sbjct: 52  GTPLVVYDVNRIRNQIRAFKKVFEEEGVSYAVSYASKAFACIAMYQVANEEGAYTDVVSA 111

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E  +++   K      +   ++   II +   ++        +   +
Sbjct: 112 GELYTALKAGFPAEKISFHGNNKSLAEIEMAVKNHVGKIIIDNFHEIELLDQVLHQYDTQ 171

Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           I   LRI P +S          +  S+ G            +  + +   N+ G+  H  
Sbjct: 172 INVMLRITPGISAHTHEYDQTGQIDSKFGFDLESGQADLALERVLANSRMNMLGIHAHIG 231

Query: 167 CENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            +      F      +++  E     +    + I++GGG              +      
Sbjct: 232 SQIFELNGFELAAKKLMEVAENWRSQYGYTAKIINVGGGFGIKYTADDNPLKPEEFVRTI 291

Query: 223 EKY-----------SVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHV 269
            +            + +I +EPG +IV        TV       +    V VD  +  ++
Sbjct: 292 IETIKKGSADAAFPTPEIDIEPGRSIVGPAGYNLYTVGSCKTIPSYSPYVAVDGGMGDNI 351

Query: 270 PDYLLYQESATIYPNTGPYTA----MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   +  N           + G+ C +GDI         VK GD ++  D   
Sbjct: 352 RPALYQAKYDVVLANNPKAPVVNRVRIAGKYCESGDILATES-LPEVKSGDVLAMLDTGA 410

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
           Y  +  + +N    P +           ++  S  D  
Sbjct: 411 YGYSMASNYNRNPRPAVVFAENRKAHLVVKRESLEDLV 448


>gi|160933534|ref|ZP_02080922.1| hypothetical protein CLOLEP_02380 [Clostridium leptum DSM 753]
 gi|156867411|gb|EDO60783.1| hypothetical protein CLOLEP_02380 [Clostridium leptum DSM 753]
          Length = 432

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 59/401 (14%), Positives = 122/401 (30%), Gaps = 38/401 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP Y++D+  +           +           A K      +   + +   G    S
Sbjct: 30  GTPLYVMDEMTIRQACRLYQKSFQENYDGHGMAFYASKALNCKELCRIVAEEGLGLDVVS 89

Query: 60  LYEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKL 114
             E+       F  E   ++     +D    A+ +    I+ + + ++ +    A  + +
Sbjct: 90  GGELYTALKAGFDPEKIHFHGNNKTQDELNMALDNGVGVIVMDNLDEMKRLDQLAAEKGV 149

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHN 165
             ++ +RI P +           +  S+ G   +           I S+  N+  +  H 
Sbjct: 150 TAQVSMRIKPGIDAHTHSFIRTGQIDSKFGFALETGEALEAAKAAIASKNLNLKEIHCHI 209

Query: 166 NCENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFCQRLK-- 219
             +      F    + +              +E ++LGGG      D             
Sbjct: 210 GSQIFDIDPFVLAAEVMMGFRKQIKDVTGVTVECMNLGGGFGIKYTDRDHPQPYNAYMST 269

Query: 220 ---------EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268
                    +  +     I LEPG +IV  +     TV  +    K    V     +  +
Sbjct: 270 VAKAVKAKAKEYDMPVPFICLEPGRSIVGESGITLYTVGSVKVIPKIRTYVSIDGGMTDN 329

Query: 269 VPDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
               L       +  +           + G+ C +GD+  E    +    GD ++     
Sbjct: 330 PRYALYKSSYLAVIADKAGQPAVEKVTIAGKCCESGDLIQEDAMIQEAAPGDTLAVFSTG 389

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            YN +  + +N I  P I +     +   ++  +Y+D   N
Sbjct: 390 AYNYSMSSNYNRIPKPPIVMVKAGSSRVIVKRETYDDLIKN 430


>gi|227544852|ref|ZP_03974901.1| diaminopimelate decarboxylase [Lactobacillus reuteri CF48-3A]
 gi|300909927|ref|ZP_07127387.1| diaminopimelate decarboxylase [Lactobacillus reuteri SD2112]
 gi|227185172|gb|EEI65243.1| diaminopimelate decarboxylase [Lactobacillus reuteri CF48-3A]
 gi|300892575|gb|EFK85935.1| diaminopimelate decarboxylase [Lactobacillus reuteri SD2112]
          Length = 441

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 70/398 (17%), Positives = 129/398 (32%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D Q++   +     + +   V   +  A K F+A  M+  +          S 
Sbjct: 36  GTPLVVYDVQQIRQQIRAFKRVFEENNVDYAVSYASKAFSAIAMYQVVAAEGAHVDVVSG 95

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F     +++   K  E   +    +  TI+ +   ++    D  +KL   
Sbjct: 96  GELYTAIKAGFPMADVSFHGNNKSREELEMAIDHHVGTIMIDNFHEIELLADVLEKLDAH 155

Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           +   LRI P +S          +  S+ G         E     +E+    + GL  H  
Sbjct: 156 VDVMLRITPGISAHTNKYIQTGQVDSKFGFDLQSGQADEALAKVLENPRMQMKGLHAHIG 215

Query: 167 CENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK--------DF 214
            +      F      +++        F  Q   I++GGG                     
Sbjct: 216 SQIFELAGFEGVAKKLVEVAAHWQEKFNYQAAVINVGGGFGIRYVKDDTPLAPEEFVAAI 275

Query: 215 CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
            + +K   ++       I++EPG +I         TV    +    K  V VD  +  ++
Sbjct: 276 IKAIKAEIKETNLAMPAIWIEPGRSIAGPAGYNLYTVGSRKDVPGLKPYVTVDGGMGDNI 335

Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +  T+  N           V G+ C +GDI  +       K GD ++  D   
Sbjct: 336 RPALYEAQYETVLANNPRAELVEHVRVAGKYCESGDILSQNQVLPATKPGDVLAMLDTGA 395

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
           Y  +  + +N    P +           I+  +Y+D  
Sbjct: 396 YGYSMASNYNRNPRPAVVFAEKGTAQVVIKRETYDDLV 433


>gi|317131446|ref|YP_004090760.1| diaminopimelate decarboxylase [Ethanoligenens harbinense YUAN-3]
 gi|315469425|gb|ADU26029.1| diaminopimelate decarboxylase [Ethanoligenens harbinense YUAN-3]
          Length = 432

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 67/401 (16%), Positives = 125/401 (31%), Gaps = 38/401 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK---NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP Y++D+  +  N    +       N+  ++  A K F    +   +     G    S
Sbjct: 30  GTPLYVMDEATITQNCRKYVESIGTYYNSRGRVYYASKAFCCKEICRIMENAGMGLDVVS 89

Query: 60  LYEVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNT--VSQLNKFKDKAQKL 114
             E+       F  +   ++   K       A+       + +      L      A+  
Sbjct: 90  GGELYTAMSVGFPADRICFHGNNKTPGEINYALDCGVGRFVVDNLTELALLNTLALARNK 149

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHN 165
              +  RI P +           +  S+ G         E  +  +     ++ G+  H 
Sbjct: 150 KPSVLFRIKPGIDAHTHNFIRTGQIDSKFGLALETGEAEEAVRQAVALPGVSLTGMHCHI 209

Query: 166 NCENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKD------YPVKDFC 215
             +      F      M+  +          +  ++LGGG             Y      
Sbjct: 210 GSQIFDIAPFELAAEVMVNFMADMRDRHGADLTELNLGGGFGIQYVPGQNPVPYDRYMQA 269

Query: 216 --QRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268
             + +K+  E   ++   I LEPG +IV +      TV  + +       V     +  +
Sbjct: 270 VSETVKKTCEARDMETPFIMLEPGRSIVASAGITLYTVGAVKDIPGVRTYVSVDGGMGDN 329

Query: 269 VPDYLLYQESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
               L   E A +           T  + G+ C +GD+  E    +PV+ GD ++     
Sbjct: 330 PRYALYQAEYAAVVAGKAAEKPTETVTIAGKCCESGDLIQEHTAIQPVQAGDILAVFATG 389

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            YN +  + +N I  P   +         IR  S+ D   N
Sbjct: 390 AYNYSMASNYNRIPRPATVMIRDRQPRVIIRRESFEDLVRN 430


>gi|229155087|ref|ZP_04283200.1| Diaminopimelate decarboxylase [Bacillus cereus ATCC 4342]
 gi|228628372|gb|EEK85086.1| Diaminopimelate decarboxylase [Bacillus cereus ATCC 4342]
          Length = 449

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 59/400 (14%), Positives = 123/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 41  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 100

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+    +  F      ++   K  E    A+ +N    + +   +L    D A      
Sbjct: 101 GELYTALQSGFPASRIHFHGNNKTDEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 160

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G         +  +  ++    NV G+  H  
Sbjct: 161 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 220

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F   ++ + +       +    ++ +++GGG      +              
Sbjct: 221 SQIFETAGFVRAIEVLRQFLEEVRERTHYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 280

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +      E    +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 281 TSAVREQFTVCEYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 340

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +       + G+ C +GD+         V   D ++      
Sbjct: 341 RPALYNARYEAMLANRGNDENEEVVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 400

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 401 YGYSMANNYNRIRRPAVVFAKGGTSQIVVERETYENIIGN 440


>gi|291458446|ref|ZP_06597836.1| diaminopimelate decarboxylase [Oribacterium sp. oral taxon 078 str.
           F0262]
 gi|291418979|gb|EFE92698.1| diaminopimelate decarboxylase [Oribacterium sp. oral taxon 078 str.
           F0262]
          Length = 484

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 67/393 (17%), Positives = 124/393 (31%), Gaps = 29/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+YL D++ +  N          N G +   A+K      +   L +   GT  SSL 
Sbjct: 77  PTPFYLYDEEGIRENARRLKQAFSWNPGFREYFAVKATPNPEILRILREEGCGTDCSSLA 136

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+ +     F G+   ++       E          I  +  S + + ++      + + 
Sbjct: 137 ELEMSEACGFRGQEIMFSSNDTPLSEYRFAEKLGAIINLDDFSNIEELRETLGGFPETLC 196

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVNGLMFH------NNCEN 169
           LR NP   +        N   ++ G   +  +E     +   V     H           
Sbjct: 197 LRYNPGGYFKIANTIMDNPQDAKFGMTEEQILEGFRILKAGGVKHFGIHAFLASNTVSNE 256

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK----- 224
                   +     +       ++ +I+L GG+    +     +    + E   +     
Sbjct: 257 YYPTLARQLFTLAVRVKEDCGIRLSFINLSGGVGIAYRPEEKPNDILAIGEGVHRVYDEI 316

Query: 225 ------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                   V+I+ E G  ++     L T V+   E  K+   VD+     +   +     
Sbjct: 317 LGKNGLSDVRIFTELGRFMLAPYGALITRVIHFKETYKHYAGVDACAANLMRPAVYGAYH 376

Query: 279 ATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                      G  +  V G  C   D F        ++ GD +   D   +       +
Sbjct: 377 HITVLGKEKEEGTESYDVVGSLCENNDKFAVDRRLPRLEKGDLLFIHDAGAHGFAMGYNY 436

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       +K  DG++K IR   +  DY+  L
Sbjct: 437 NGKLWCAELLKKRDGSVKLIRRAETPRDYFATL 469


>gi|253576361|ref|ZP_04853691.1| diaminopimelate decarboxylase [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251844254|gb|EES72272.1| diaminopimelate decarboxylase [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 442

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 60/398 (15%), Positives = 124/398 (31%), Gaps = 36/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++D+  +       +   + +G   ++  A K F    M     +        S 
Sbjct: 30  GTPLYIVDEALVRQRCREYMDAFRASGLSFQVAYASKAFCVMAMCRLAEEEGLSLDVVSE 89

Query: 61  YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F  +   ++      D    A+ +     + +  ++L+  +  A  + + 
Sbjct: 90  GELYTALQAGFPAQRIHFHGNNKTPDELEMAISAGIGCFVADNFTELHMLQALAAEKGVT 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             + LR+ P V           +  S+ G         E       S   ++ G+  H  
Sbjct: 150 VNVLLRVTPGVEAHTHEYISTGQTDSKFGFDIGNGSALEAVDLANRSLNLHLLGVHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQI----EWISLGGGIHFTDKDYPVKDFC------- 215
            +      F   ++ +         Q+    + ++LGGG      +              
Sbjct: 210 SQIFEVEGFQLAVERVAAFAMQVKDQLGVIFKVVNLGGGFGIRYTEGDTPLKVSDYVGAI 269

Query: 216 -QRLKEFSEKYSV--QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVP 270
              +K     Y    +I++EPG +IV +  T   TV    +       V     +  +  
Sbjct: 270 TDAVKREFADYPQLPEIWVEPGRSIVGDAGTTLYTVGTSKDIPGVRKYVAVDGGMTDNPR 329

Query: 271 DYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
             L   +   +      +    T  + G+ C +GD+         V  GD ++      Y
Sbjct: 330 PALYGSKYEAMLANRANDANEETVSIAGKCCESGDMLIWDVELPKVNSGDLLAVSCTGAY 389

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           N    + +N I  P +       +   ++  S  D   
Sbjct: 390 NYAMASNYNRIRRPAVVFVQDGRSDLVVKRESLQDLVA 427


>gi|206968100|ref|ZP_03229056.1| diaminopimelate decarboxylase [Bacillus cereus AH1134]
 gi|206737020|gb|EDZ54167.1| diaminopimelate decarboxylase [Bacillus cereus AH1134]
          Length = 438

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 60/400 (15%), Positives = 122/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 30  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREESMSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+       F      ++   K  E    A+ +N    + +   +L    D A +    
Sbjct: 90  GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFFELEVLHDLAMQHGKF 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G    +          ++    NV G+  H  
Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIGFALQKSNYNVLGIHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F   ++ + +       Q    ++ +++GGG      +              
Sbjct: 210 SQIFETAGFVRAIEVLRQFLEEVREQTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +      E    +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 270 TSAVREQFTVCEYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +       + G+ C +GD+         V   D ++      
Sbjct: 330 RPALYSARYEAMLANRGNDENEELVSIAGKCCESGDMLIWDIHLPKVAASDLLAVSCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGN 429


>gi|729299|sp|P41023|DCDA_BACMT RecName: Full=Diaminopimelate decarboxylase; Short=DAP
           decarboxylase
 gi|304155|gb|AAC36985.1| diaminopimelate decarboxylase [Bacillus methanolicus MGA3]
          Length = 432

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 55/391 (14%), Positives = 118/391 (30%), Gaps = 37/391 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   +              G+K  +  A K F+   M     +        S 
Sbjct: 30  GTPLYVYDVALIRERARGFKNTFDELGIKAQVAYASKAFSTVAMIQLAEEEGLSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F      ++   K      +        I+ +   +L+        + + 
Sbjct: 90  GELYTALVAGFPVHKIHFHGNNKSRAELEMALEHQIGCIVVDNFHELDLIDSICSEKNVK 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
             I LR+ P +           +  S+ G   ++          + S    V G+  H  
Sbjct: 150 TNILLRVTPGIEAHTHDYILTGQEDSKFGFDLQNGQAEKALQIALNSNFVEVLGVHCHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEW----ISLGGGIHFTDKDYPVKDFC-QRLKEF 221
            +      F    + I ++   +  ++ +    ++LGGG      +        Q +KE 
Sbjct: 210 SQIFDTTGFVLAARKIFEKLKEWKDRLSYEPKVLNLGGGFGIRYTEEDDPIPASQYVKEI 269

Query: 222 SEK----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
             +             +I++EPG ++V +  T    +    +       V     +  ++
Sbjct: 270 INEVKKQVSAYSMKMPEIWIEPGRSLVGDAGTTLYQIGSRKDVPNVRHYVAVDGGMSDNI 329

Query: 270 PDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   +  N        T  + G+ C +GD+             D ++      
Sbjct: 330 RPALYNAKYEAVLANKPLAKADETVSIAGKCCESGDMLIWDLPLPKADSDDILAVFCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           Y  +  N +N I  P +       ++  ++ 
Sbjct: 390 YGYSMANNYNRIPRPAVVFVENGESMLVVKR 420


>gi|153002477|ref|YP_001368158.1| diaminopimelate decarboxylase [Shewanella baltica OS185]
 gi|151367095|gb|ABS10095.1| diaminopimelate decarboxylase [Shewanella baltica OS185]
          Length = 414

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 60/382 (15%), Positives = 110/382 (28%), Gaps = 23/382 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  A   + + L +   G    S  E
Sbjct: 26  GTPLYIYSRATLERHWHAFNNAVADHPHLICYAVKANANLAVLNVLARLGSGFDIVSGGE 85

Query: 63  VMLGHE-KFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +    E         ++   K       A+          + ++L +    A +L K   
Sbjct: 86  LARVMEAGGDPAKVVFSGVGKTAAEMEQALNLGIYCFNVESSAELEQLNLVAGRLGKVAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNC--- 167
           + LRINP V              ++ G    +               V G+  H      
Sbjct: 146 VSLRINPDVDAGTHPYISTGLKENKFGIAMDEAEIVFARAHALPHLKVKGVDCHIGSQLT 205

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
           E K FL     +  +          IE   +GGG+  T           +   +      
Sbjct: 206 EIKPFLDAMDRMLALIDRLAEQGIVIEHFDVGGGLGVTYDAETPPHPDVYAAAILARLGD 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQE---SAT 280
             +++  EPG AI  N     T VL +   + K   IVD ++   +   L          
Sbjct: 266 RQLKLIFEPGRAIAANAGIFVTQVLYLKENSDKRFAIVDGAMNDLIRPALYSAWQNIIPV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
           +  ++  Y   + G  C  GD  G+            ++      Y     + +N     
Sbjct: 326 VPRDSEAYEFDIVGPVCETGDFLGKNRQLALAAGD-LLAVRSSGAYGFAMASNYNTRPRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDY 362
              + + +           +  
Sbjct: 385 AEVMVDGEQAFLVREREKLSQL 406


>gi|324325535|gb|ADY20795.1| diaminopimelate decarboxylase [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 438

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 58/400 (14%), Positives = 120/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 30  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F      ++   K  E    A+ +N    + +   +L    D A      
Sbjct: 90  GELYTALQAGFPASRIHFHGNNKTDEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G         +  +  ++    NV G+  H  
Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F   ++ + +            ++ +++GGG      +              
Sbjct: 210 SQIFETAGFVRAIEVLRQFLEAVRERTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +           +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 270 TSAVREQFTLCNYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +       + G+ C +GD+         V   D ++      
Sbjct: 330 RPALYNARYEAMLANRGNDENEEVVSIAGKCCESGDMLIWDINLPKVASADLLAISCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQIVVERETYENIIGN 429


>gi|228920229|ref|ZP_04083577.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228938632|ref|ZP_04101237.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228971513|ref|ZP_04132137.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228978124|ref|ZP_04138502.1| Diaminopimelate decarboxylase [Bacillus thuringiensis Bt407]
 gi|228781596|gb|EEM29796.1| Diaminopimelate decarboxylase [Bacillus thuringiensis Bt407]
 gi|228788172|gb|EEM36127.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228821008|gb|EEM67028.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228839428|gb|EEM84721.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|326939140|gb|AEA15036.1| diaminopimelate decarboxylase [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 438

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 60/400 (15%), Positives = 122/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 30  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+       F      ++   K  E    A+ +N    + +   +L    D A +    
Sbjct: 90  GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFFELEVLHDLAMQHGKF 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G    +          ++    NV G+  H  
Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIGFALQKSNYNVLGIHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F   ++ + +       Q    ++ +++GGG      +              
Sbjct: 210 SQIFETAGFVRAIEVLRQFLEEVREQTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +      E    +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 270 TSAVREQFTVCEYPLPEIWIEPGRSIVGDAGTTIYTVGSVKDIPGIRKYVSVDGGMTDNL 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +       + G+ C +GD+         V   D ++      
Sbjct: 330 RPALYSARYEAMLANRGNDENEELVSIAGKCCESGDMLIWDIHLPKVASADLLAVSCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGN 429


>gi|295106272|emb|CBL03815.1| diaminopimelate decarboxylase [Gordonibacter pamelaeae 7-10-1-b]
          Length = 458

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 60/400 (15%), Positives = 128/400 (32%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            T  Y++D++ +   ++T L   +       ++ A K F        +N+       S  
Sbjct: 57  GTALYVMDERDMRTRMETYLEAFRSRYGNADVVYASKAFLNKEAARIVNEEGLCLDVSGG 116

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+       F  E    +   K  +   +A+ +    I+ ++  +L +  + A +L   
Sbjct: 117 GELACALATGFPAERIFMHGNNKTPQELREAIQAGVGRIVIDSRIELRRISEIAGELGVE 176

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNN 166
           + + +RI P V              S+ G            KD + +    + GL  H  
Sbjct: 177 QPVYMRITPGVEADTHQYIRTGCEDSKFGFTMREDFAFKCVKDVLAAPNVRLAGLHCHIG 236

Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC------- 215
            +             M+  + +    +  ++  + +GGG+                    
Sbjct: 237 SQIFALHSYPEAVEVMVDLMARIREAYGIELSELDMGGGLGVAYTADDKPASIDEFAETI 296

Query: 216 -QRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
              ++    K+ +    + +EPG ++V        TV  I         V     +  ++
Sbjct: 297 TAAVRTACAKHGMPEPRLLVEPGRSLVATAGVTLYTVGIIKTLPNIRKYVAVDGGMSDNI 356

Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L + +   +  N           + G+ C +GD        +   +GD ++      
Sbjct: 357 RTALYHADYEPVVANKAAQPRTEIVTIAGKHCESGDAVVIDMPMQRPDLGDVVAVFGTGA 416

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           YN    + +NG   P +            R  +Y D Y+ 
Sbjct: 417 YNHTMSSNYNGQPRPAVVFVKDGEARVTTRRETYEDLYSR 456


>gi|291542677|emb|CBL15787.1| diaminopimelate decarboxylase [Ruminococcus bromii L2-63]
          Length = 432

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 70/401 (17%), Positives = 128/401 (31%), Gaps = 38/401 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP Y++D+  + N     +   +         L A K  +   +     +   G    S
Sbjct: 30  GTPLYVLDETTIRNVCKAYVKSFEKYYHGNGMPLYASKALSCKELCRIAKEEGLGLDVVS 89

Query: 60  LYEVMLG-HEKFGGET-HAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
             E+       F  E  H +       EI  A+ SN    + + + +L    +   ++ K
Sbjct: 90  GGEIYTAVQAGFPMEKVHFHGNNKTADEIRFALESNVGKFVVDNLYELELLNEICGEMGK 149

Query: 117 KIGL--RINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHN 165
           K  +  RI P V           +  S+ G         E  K     +  N+  L  H 
Sbjct: 150 KANISFRIKPGVDAHTHNFIRTGQIDSKFGFALETGEAFEAVKKAQMYDNVNLTELHCHI 209

Query: 166 NCENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYP--------VKD 213
             +      F    + +    G         I  ++LGGG                 ++ 
Sbjct: 210 GSQIFDIDPFVTAAEIMLDFMGKIHDELGIVISELNLGGGFGIMYTKDDEPVPYENYMEK 269

Query: 214 FCQRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268
             + +K  ++++ +    I++EPG +IV         V    E       V     +  +
Sbjct: 270 VSEAVKAKAKEHGLPVPYIFIEPGRSIVGEAGITLYKVGGKKEIPNVRTYVSVDGGMTDN 329

Query: 269 VPDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
           +   L       +              V G+ C +GD+  E      V++GD ++     
Sbjct: 330 IRYALYQSAYTVVNAGKADKEPDEIVTVAGKCCESGDLVQEHTKVAKVEVGDTLAVLSTG 389

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            YN +  + +N I  P I +         ++  SY D   N
Sbjct: 390 AYNYSMASNYNRIPRPAIVMVKDGKARVVVKRESYEDIVKN 430


>gi|228951897|ref|ZP_04113995.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228807820|gb|EEM54341.1| Diaminopimelate decarboxylase [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 438

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 59/400 (14%), Positives = 121/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 30  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+       F      ++   K  E    A+ +N    + +   +L    D A +    
Sbjct: 90  GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFFELEVLHDLAMQHGKF 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G    +          ++    NV G+  H  
Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAITFALQKSNYNVLGIHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F   ++ + +            ++ +++GGG      +              
Sbjct: 210 SQIFETAGFVRAIEVLRQFLVEVREQTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +      E    +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 270 TSAVREQFTVCEYPLPEIWIEPGRSIVGDAGTTIYTVGSVKDIPGIRKYVSVDGGMTDNL 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +       + G+ C +GD+         V   D ++      
Sbjct: 330 RPALYSARYEAMLANRGNDENEELVSIAGKCCESGDMLIWDIHLPKVASSDLLAVSCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGN 429


>gi|330684722|gb|EGG96420.1| diaminopimelate decarboxylase [Staphylococcus epidermidis VCU121]
          Length = 421

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 64/394 (16%), Positives = 135/394 (34%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D++++ N +       + +G+K  +  A K F    M   + +        S 
Sbjct: 26  GTPTIVYDEEQIRNQMRRYHKAFQQSGLKYNISYASKAFTCIQMVKLVQEEDLQLDVVSE 85

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    E  F      ++   K          ++    + +++ +++     A +  + 
Sbjct: 86  GELYTALEAGFDPSRIHFHGNNKTKHEIRYALDNHIGYFVIDSLEEIDLIDRYASETVQV 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
           + LR+NP V           +  S+ G         E      +++  N+ G+  H   +
Sbjct: 146 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIRYGLANEAVDKIKQAKHLNLKGVHIHIGSQ 204

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ--------RLKE 220
            +    F    K +         Q++ ++LGGG      +  V    +         +K 
Sbjct: 205 IEGTEAFIETAKIVMNWLNDQQIQVDLLNLGGGFGIKYVEGDVSFPIESGIAEITDAIKN 264

Query: 221 FSEKYSVQIY---LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274
            + + +++     +EPG +IV         V  I E  +    V     +  H+   L  
Sbjct: 265 EANQLNMETPEIGIEPGRSIVGEAGITLYEVGTIKEIPEINKYVSIDGGMSDHIRTALYD 324

Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331
             YQ            T  + G+ C +GDI  +       V+ GD ++      Y+ +  
Sbjct: 325 AKYQALLVNRHEEANDTVTIAGKLCESGDIIIKNAKLPSSVQRGDYLAILSTGAYHYSMA 384

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + +N +  P++         + I+  S      N
Sbjct: 385 SNYNQMQKPSVFFIKDGKAREVIKRQSLRQLIIN 418


>gi|269121588|ref|YP_003309765.1| diaminopimelate decarboxylase [Sebaldella termitidis ATCC 33386]
 gi|268615466|gb|ACZ09834.1| diaminopimelate decarboxylase [Sebaldella termitidis ATCC 33386]
          Length = 435

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 69/400 (17%), Positives = 134/400 (33%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++D++ + + +D        +    ++  A K F   GM + +N+        S 
Sbjct: 30  GTPLYVMDQKLIEDTIDIMKEAFVSERFNTQIAYAGKAFLTTGMVNLVNKKGLDLDVVSA 89

Query: 61  YEVMLG-HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E    +      +    A+      I+ +   ++ K +   ++ +KK
Sbjct: 90  GELYTAVKAGFPMERIHMHGNNKSDEELNMAIEYGIKEIVIDNEDEIEKIERICREKNKK 149

Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
               LRI+P +          +   S+ G            K   +SE     G   H  
Sbjct: 150 QAVLLRIDPGIEAHTHEYIKTSGLTSKFGVSLFQENLFDIVKRLDDSEFIEFKGFHTHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKD--------- 213
            +      F   L  I K            +E +++GGG      +              
Sbjct: 210 SQIFQSAFFIFALDEIFKYLSKLKEELGIAVETVNMGGGFGVYYAEGDQPPKLDELLKEV 269

Query: 214 --FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
             + + ++         +Y+EPG +IV N  T   TV  I E +  K  V VD  +  ++
Sbjct: 270 ITYTEAMEIKYRIGFKNLYIEPGRSIVANAGTTLYTVGGIKETVGGKTYVFVDGGMADNI 329

Query: 270 PDYLLYQESA----TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +          +       + G+ C +GD+       +  ++GD I+      
Sbjct: 330 RPALYQAKYEAGIINKLKDEDRKEITLAGKFCESGDVLIGNAKLQNAEVGDIIAVPTTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  + +N    P +          A++  + +D   N
Sbjct: 390 YCYSMSSNYNRFAKPALVFVKDGQAKLAVKRETLDDLVRN 429


>gi|47566309|ref|ZP_00237337.1| diaminopimelate decarboxylase [Bacillus cereus G9241]
 gi|47556862|gb|EAL15193.1| diaminopimelate decarboxylase [Bacillus cereus G9241]
          Length = 438

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 59/400 (14%), Positives = 123/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 30  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+    +  F      ++   K  E    A+ +N    + +   +L    D A      
Sbjct: 90  GELYTALQSGFPASRIHFHGNNKTDEEIVMALQANIGCFVVDNFLELEILHDLAVQHGKF 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G         +  +  ++    NV G+  H  
Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIELALQKSNYNVLGIHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F   ++ + +       +    ++ +++GGG      +              
Sbjct: 210 SQIFETAGFVRAIEVLRQFLEEVRERTHYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +      E    +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 270 TSAVREQFTVCEYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +       + G+ C +GD+         V   D ++      
Sbjct: 330 RPALYNARYEAMLANRGNDENEEVVSIAGKCCESGDMLIWDITLPKVASADLLAISCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQIVVERETYENIIGN 429


>gi|319944763|ref|ZP_08019027.1| exopolyphosphatase [Lautropia mirabilis ATCC 51599]
 gi|319742012|gb|EFV94435.1| exopolyphosphatase [Lautropia mirabilis ATCC 51599]
          Length = 430

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 56/388 (14%), Positives = 115/388 (29%), Gaps = 27/388 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +Q +                ++  A+K  +   +     Q   G    S  E
Sbjct: 38  GTPLYVYSRQAIEATWQRFAQALTGRDARICFAVKASSNLAILGLFAQLGAGFDVVSGGE 97

Query: 63  -VMLGHEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
              +           ++   K  D    A+ ++       ++ +L +    A        
Sbjct: 98  LARVIAAGGDPRKVVFSGVGKSGDEIRQALAADIACFNVESLPELERINQIAGEMGKRAP 157

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           + LRINP V  +           ++ G      + +           ++G+  H   +  
Sbjct: 158 VSLRINPDVDAATHPYISTGLKENKFGIPHSQALAAYRQAAALPHLQIHGIDCHIGSQIT 217

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
               F A L  +     +       I  + LGGG+     +         ++   ++ + 
Sbjct: 218 EASPFLAALDRVLALVDQLEAEGIAIGHLDLGGGLGIRYDNETPPTPEALMQALFDRLTQ 277

Query: 228 -------QIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESA 279
                   +  E G A+V N   L T +  + +N  ++  +VD+++   +   L      
Sbjct: 278 WRPDGLPGVTFEFGRALVGNAGLLLTCLEYLKDNEGQHFAVVDAAMNDLMRPALYQAYHR 337

Query: 280 TIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
               N G     TA V G  C +GD          +     ++      Y     + +N 
Sbjct: 338 VEVVNPGNAPVVTADVVGPVCESGDWLARKRPLA-LPPDAVLAILSAGAYGSTMASNYNS 396

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364
              P   + +           +  D   
Sbjct: 397 RPRPAEVLIDGKHVHLIRERETMADLLR 424


>gi|229189600|ref|ZP_04316615.1| Diaminopimelate decarboxylase [Bacillus cereus ATCC 10876]
 gi|228593864|gb|EEK51668.1| Diaminopimelate decarboxylase [Bacillus cereus ATCC 10876]
          Length = 438

 Score =  214 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 60/400 (15%), Positives = 122/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 30  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREESMSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+       F      ++   K  E    A+ +N    + +   +L    D A +    
Sbjct: 90  GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFFELEVLHDLAMQHGKF 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G    +          ++    NV G+  H  
Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIRFAVQKSNYNVLGIHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F   ++ + +       Q    ++ +++GGG      +              
Sbjct: 210 SQIFETAGFVRAIEVLRQFLEEVREQTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +      E    +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 270 TSAVREQFTVCEYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +       + G+ C +GD+         V   D ++      
Sbjct: 330 RPALYSARYEAMLANRGNDENEELVSIAGKCCESGDMLIWDIHLPKVAASDLLAVSCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGN 429


>gi|330994277|ref|ZP_08318205.1| Diaminopimelate decarboxylase [Gluconacetobacter sp. SXCC-1]
 gi|329758744|gb|EGG75260.1| Diaminopimelate decarboxylase [Gluconacetobacter sp. SXCC-1]
          Length = 460

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 54/384 (14%), Positives = 106/384 (27%), Gaps = 28/384 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           + TP +++    L           +  G  V +  A+K      +   L     G    S
Sbjct: 51  LGTPTWVMSAGTLRARYQRLATAFRATGRPVSIHFAVKANDHLAVLRVLAAQGAGADVVS 110

Query: 60  LYEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--L 114
             E+              ++           A+ +    I   +  +L      AQ   L
Sbjct: 111 GGELQRALMAGIPAARIVFSGVGKTMPEMQAALRAGIAQINVESAEELELLSTVAQAEGL 170

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNC 167
              + LRINP V              ++ G      ++              GL  H   
Sbjct: 171 EAPVALRINPDVDAGTHAKITTGLATNKFGIPYNRAVDLYAHAATLPGIRPVGLAMHIGS 230

Query: 168 ENKSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEF 221
           +      +      +    +        IE +  GGG+  + +D      +     +   
Sbjct: 231 QIVRMQPYRTAYARLADLVRAIRARGLHIEALDCGGGLGISYRDETEGAPEALAAAIHGE 290

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV---DSSVEAHVPDYLLYQES 278
                 ++ +EPG  +      L +TV+      + +      D+++   +   L     
Sbjct: 291 LGGLGTRLAIEPGRWLAGPAGLLLSTVILRKRGYEGMPPFLVLDAAMNDLMRPSLYDAWH 350

Query: 279 ATIY-----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
             I               V G  C +GD FG       +  G R++  D   Y +   + 
Sbjct: 351 GIIPLSARDAVAPAEQVHVVGPVCESGDTFGHDRTLPHMDAGARLALLDCGAYGMVMSST 410

Query: 334 FNGINMPTIAVKNVDGTIKAIREF 357
           +N   +    + +           
Sbjct: 411 YNARPLAAQVMVDGGHWAVIRERQ 434


>gi|145596164|ref|YP_001160461.1| diaminopimelate decarboxylase [Salinispora tropica CNB-440]
 gi|145305501|gb|ABP56083.1| diaminopimelate decarboxylase [Salinispora tropica CNB-440]
          Length = 470

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 60/407 (14%), Positives = 123/407 (30%), Gaps = 47/407 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            T  YL+D++ L +               +  A K F    +   + +        S  E
Sbjct: 62  GTSVYLLDEEDLRSRCRDFRAAFPTED--VYYAGKAFLCRAVARMVAEEGLHLDVCSGGE 119

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117
           +          E   ++   K       A+      II ++  ++++    A++  +  +
Sbjct: 120 LATALAAGVPPERIGFHGNNKSIAELSRALDVGVGRIIVDSSHEIDRLTALARERGVRPR 179

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G    +          ++ ++  + GL  H   +
Sbjct: 180 VLVRVTVGVEAHTHEFIATAHEDQKFGFSLAEGAAIAAVLRILDEDVLELRGLHSHIGSQ 239

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF----CQRLKE 220
                 F      +L    +       Q+  + LGGG                  +RL++
Sbjct: 240 IFDASGFEVSARRVLALQAQIRDARGVQLPELDLGGGFGIAYTSQDDPATPADLAKRLRK 299

Query: 221 FSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDIS-----------ENIKNLVIVD 262
             +            + +EPG AIV         V  +            +  +  V VD
Sbjct: 300 IVDGECAAERLAVPHLSIEPGRAIVGPAMFTLYEVGTVKSVPVGTGGDAVDGRRCYVSVD 359

Query: 263 SSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDR 317
             +  ++   L         A+      P  A V G+ C +GDI  +  F    V+ GD 
Sbjct: 360 GGMSDNIRTALYDASYSATLASRASVAEPVLARVVGKHCESGDIVVKDEFLPADVQPGDL 419

Query: 318 ISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           ++      Y  +  + +N +  P +           +R  +  D   
Sbjct: 420 VAVPGTGAYCRSMASNYNHVPRPPVVAVRDGRARLIVRRETEEDLLA 466


>gi|229078703|ref|ZP_04211257.1| Diaminopimelate decarboxylase [Bacillus cereus Rock4-2]
 gi|228704576|gb|EEL57008.1| Diaminopimelate decarboxylase [Bacillus cereus Rock4-2]
          Length = 438

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 59/400 (14%), Positives = 121/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 30  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+       F      ++   K  E    A+ +N    + +   +L    D A +    
Sbjct: 90  GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFFELEVLHDLAMQHGKF 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G    +          ++    NV G+  H  
Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIRFALQKSNYNVLGIHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F   ++ + +            ++ +++GGG      +              
Sbjct: 210 SQIFETAGFVRAIEVLRQFLVEVREQTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +      E    +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 270 TSAVREQFTVCEYPLPEIWIEPGRSIVGDAGTTIYTVGSVKDIPGIRKYVSVDGGMTDNL 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +       + G+ C +GD+         V   D ++      
Sbjct: 330 RPALYSARYEAMLANRGNDENEELVSIAGKCCESGDMLIWDIHLPKVASSDLLAVSCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGN 429


>gi|157364120|ref|YP_001470887.1| diaminopimelate decarboxylase [Thermotoga lettingae TMO]
 gi|157314724|gb|ABV33823.1| diaminopimelate decarboxylase [Thermotoga lettingae TMO]
          Length = 382

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 56/368 (15%), Positives = 124/368 (33%), Gaps = 19/368 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D   ++  + +   +  +   ++  A+K      +  TLN +       S  E
Sbjct: 14  GTPLYVYDLPFIIKRITSLKDLFFDLDFRIAYAMKANFNRDLLKTLNNFGLMIDVVSYGE 73

Query: 63  VMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            +      F  +    N      D     V +   +I  ++  +L + +         I 
Sbjct: 74  YLHARSIGFAPDRIIVNGNCKKVDQLKTYVNNGVFSINLDSYEELLRLEKI-IDSQTNIS 132

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCENKSF 172
           +R+NP V              ++ G          +   +++   + G   H   +    
Sbjct: 133 IRVNPDVDAKTHPHISTGLKENKFGVDFDTAAAMIRRIEKNKYLKLIGFHCHIGSQITEI 192

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKYSVQI 229
             +   + ++         +IE ++LGGG        K   + ++  ++    +K    +
Sbjct: 193 QPYLEAITSLIDFIEKTGIEIEILNLGGGWGIDYGDGKFLDLNEYRNKILPLLKKTMKTV 252

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATI----YPN 284
             E G  I      L + V  + +    + +V D+ +   +   L   +   I      +
Sbjct: 253 IFELGRWITAPAGYLISKVEYVKKTRYKIFVVVDTGMTHLIRPALYGAKHKIIPLYPSND 312

Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344
                A + G +C + D+  + +       G+ I+  DV  Y     + +N I  P   +
Sbjct: 313 RKMIVADIVGPACESSDVLRKEYKLPEPAEGELITICDVGAYGFAMASEYNLIPKPIEVI 372

Query: 345 KNVDGTIK 352
            + +  IK
Sbjct: 373 WDGEKFIK 380


>gi|268319541|ref|YP_003293197.1| hypothetical protein FI9785_1064 [Lactobacillus johnsonii FI9785]
 gi|262397916|emb|CAX66930.1| lysA [Lactobacillus johnsonii FI9785]
          Length = 434

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 66/398 (16%), Positives = 132/398 (33%), Gaps = 38/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D  ++ N +     + +       +  A K FA+  M+   N+    T   S 
Sbjct: 30  GTPLVVYDVSQIRNQIRAFKKVFEEEQVNYVVSYASKAFASIAMYQVANEEGAYTDVVSA 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F  E  +++   K  E   +   ++   II +   +++  +     Q   
Sbjct: 90  GELYTAMKANFPMERISFHGNNKSKEELEMGVKNHVGKIIIDNFYEIDLLRQVLEEQDSK 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNN 166
             + LRI P +S          +  S+ G   K         + ++++  ++ G+  H  
Sbjct: 150 INVMLRITPGISAHTHEYDQTGQVDSKFGFDLKSGQADKALQEVLKNKRMHMLGIHAHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEW----ISLGGGIHFTDKDYPVK--------DF 214
            +      F      +      +  + ++    I++GGG                     
Sbjct: 210 SQIFELNGFEMAAAKLVDVAASWKEKYDYTAQIINVGGGFGIKYVQEDHPLKPEEFVKAI 269

Query: 215 CQRLKEFSEKYSVQIY---LEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
            + +K+ + K++  I    +EPG +IV         V  + E       V VD  +  ++
Sbjct: 270 VKAIKDEATKHNFPIPEIDIEPGRSIVGPAGYNLYKVGSMKEIPGLVPYVAVDGGMGDNI 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +  T+              V G+ C +GDI         +K GD ++  D   
Sbjct: 330 RPALYQAKYETVLANNPQRRASQEFHVAGKYCESGDILA-DAKLPSLKAGDILAMLDTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
           Y  +  + +N    P +           I+  S  D  
Sbjct: 389 YGYSMASNYNRNPRPAVVFAENGKAQVVIKRESLEDLI 426


>gi|170017508|ref|YP_001728427.1| diaminopimelate decarboxylase [Leuconostoc citreum KM20]
 gi|169804365|gb|ACA82983.1| Diaminopimelate decarboxylase [Leuconostoc citreum KM20]
          Length = 433

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 64/391 (16%), Positives = 122/391 (31%), Gaps = 33/391 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D  K+   +     I +   V   +  A K FA   ++    Q        S 
Sbjct: 26  GTPLYVYDVTKIRQTMRAFKAIFEKENVPYIVSYASKAFATKAIYQVAQQEGIHADVVSG 85

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F  +  ++N   K  +  + AV     T+I +   +L    + A   ++ 
Sbjct: 86  GELYTAIQAGFNPKHLSFNGNNKSWDELMMAVQQGIGTVIVDNFLELQLLSEIAEKCQVV 145

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
           + I LRI+P +S          +  S+ G                +    ++ GL  H  
Sbjct: 146 QDILLRISPGISAHTHEFISTGQQDSKFGFDLLTGQAKAAYDIASQDSHFHLRGLHAHIG 205

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF--------CQRL 218
            +      F      +      +  Q + I++GGG      D               + L
Sbjct: 206 SQIFDVTGFEKNAALLADTAQSWGWQPDIINVGGGFGIRYTDDDEPLPESDYVSAIIRTL 265

Query: 219 KEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYL 273
           K  + +Y  ++   ++EPG ++V        TV    +       +     +  ++   L
Sbjct: 266 KGKAAEYDWKMPEIWIEPGRSVVGPAGQTLYTVGARKDIPDMRHYIAVDGGMGDNIRPAL 325

Query: 274 LYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
                  +  N           V G+ C +GD+          + GD +S      Y   
Sbjct: 326 YEANYEAVLANQPNIPAQEVVRVAGKYCESGDVLVWQQKLPKTQAGDILSVLATGAYGYA 385

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
             + +N    P +           +   +Y 
Sbjct: 386 MASNYNRNPRPAVVFVENGQHQLVVARETYE 416


>gi|56963566|ref|YP_175297.1| diaminopimelate decarboxylase [Bacillus clausii KSM-K16]
 gi|56909809|dbj|BAD64336.1| diaminopimelate decarboxylase [Bacillus clausii KSM-K16]
          Length = 443

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 60/397 (15%), Positives = 125/397 (31%), Gaps = 37/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP ++ D   +           +  GV  ++  A K F+   M+             S 
Sbjct: 30  DTPLFVYDTALIKERARAFKQAFEAEGVSYQVAYASKAFSCIAMYQLAASLDLSIDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+              ++   K      +        I+ +   +L   ++ A  + + 
Sbjct: 90  GELYTALKAGVEPGKIHFHGNNKSHGELEMAIKAGIGCIVADNFYELELLEELAANMEQT 149

Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
           +   LR+ P V           +  S+ G                 S+  ++ G+  H  
Sbjct: 150 VSVLLRLTPGVEAHTHEFIATGQEDSKFGFDIASGQADKAAQIAERSKFIDLLGVHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWI----SLGGGIHFTD-----KDYPVKDFCQR 217
            +      F   ++ +  +   +  + +++    + GGG             P     + 
Sbjct: 210 SQIFETEGFVLAIEKVFNQLQAWQEEFDFVPRVLNFGGGFGIRYVEGDKPLEPETYIREI 269

Query: 218 LKEFSEKYS------VQIYLEPGEAIVTNTTTLNTTVLDISENIK--NLVIVDSSVEAHV 269
           +KE  +          +I++EPG ++V +  T   T+    +       + VD  +  ++
Sbjct: 270 VKETKKHADRLGLAIPEIWIEPGRSLVGDAATTLYTIGSTKDIPNVRRYLSVDGGMSDNL 329

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +     A    +    T  V G+ C +GD+         V+ GD ++      
Sbjct: 330 RPALYDAKYEGLLANRAHDKAEETFSVAGKCCESGDMLVWDMPLPEVQHGDVLAMFCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
           Y  +  N +N I  P +           I+  SY D 
Sbjct: 390 YGYSMANNYNRIPRPAVVFAEDGADQLVIQRESYEDL 426


>gi|258515316|ref|YP_003191538.1| diaminopimelate decarboxylase [Desulfotomaculum acetoxidans DSM
           771]
 gi|257779021|gb|ACV62915.1| diaminopimelate decarboxylase [Desulfotomaculum acetoxidans DSM
           771]
          Length = 447

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 58/398 (14%), Positives = 117/398 (29%), Gaps = 36/398 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIR-KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           TP Y++D++   +N               ++ A K      +   + +        S  E
Sbjct: 31  TPLYVLDEKYFRSNCREYYRAFSDRFNSDVIYASKTLLNTAVCRMIEEEGLCLDIVSGGE 90

Query: 63  VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +       F      ++   K  D    A+ +     I + + +L    + A K +    
Sbjct: 91  LYTALKAGFPASRMYFHGNNKTTDELKLALEAGVGRYIVDNLYELELLNNMAGKANITAD 150

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168
           I LRI P V           +  S+ G   +           +      ++G   H   +
Sbjct: 151 ILLRITPGVEAHTHEYIKTGQIDSKFGLAIETGQAMEGTKKALNLANVRLHGFHCHIGSQ 210

Query: 169 NKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDF--------CQ 216
                 F+     +                 + LGGG+     +                
Sbjct: 211 IFELESFAHAANIMMSFINNVRTETAFTAAELDLGGGLGIYYFEGDEPKPVKELADIIIN 270

Query: 217 RLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271
            +++ +++Y     +I +EPG +I         TV  + +       V     +  +   
Sbjct: 271 EVRKQADEYCLPVPKIMVEPGRSISGPAGITLYTVGSVKDIPGIRKYVAVDGGMNDNPRP 330

Query: 272 YLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
            L          N           + G+ C +GD+  +     P + GD +       YN
Sbjct: 331 ALYQSRYEAALANKMNEKETELVSIAGKCCESGDMLIKDTKLPPAEPGDVLVVTSTGAYN 390

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
                 +N I  P + + N       ++  ++ D   N
Sbjct: 391 YAMSMNYNRITRPAMILVNEGAAEVIVQRETFEDLIRN 428


>gi|184155330|ref|YP_001843670.1| diaminopimelate decarboxylase [Lactobacillus fermentum IFO 3956]
 gi|227515201|ref|ZP_03945250.1| diaminopimelate decarboxylase [Lactobacillus fermentum ATCC 14931]
 gi|260662157|ref|ZP_05863053.1| diaminopimelate decarboxylase [Lactobacillus fermentum 28-3-CHN]
 gi|183226674|dbj|BAG27190.1| diaminopimelate decarboxylase [Lactobacillus fermentum IFO 3956]
 gi|227086533|gb|EEI21845.1| diaminopimelate decarboxylase [Lactobacillus fermentum ATCC 14931]
 gi|260553540|gb|EEX26432.1| diaminopimelate decarboxylase [Lactobacillus fermentum 28-3-CHN]
 gi|299783176|gb|ADJ41174.1| Diaminopimelate decarboxylase [Lactobacillus fermentum CECT 5716]
          Length = 439

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 65/396 (16%), Positives = 121/396 (30%), Gaps = 37/396 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           +TP  + D   + + +     +     V  ++  A K F+A  ++  + Q        S 
Sbjct: 31  QTPLVVYDVAAIRHQIRAFKKVFAKNQVAAEVSYASKAFSAIAIYQVVAQEDGHIDVVSG 90

Query: 61  YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F  E  +++   K  +    AV +    II +   +++   +    Q   
Sbjct: 91  GELTTAIKAHFPMEKVSFHGNNKSKEELELAVQNGVGMIIIDNFHEIDLLGEVLDEQDAT 150

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNN 166
             + LRI P ++          +  S+ G   +         + + +    V GL  H  
Sbjct: 151 ATVSLRITPGIAAHTNEYIQTGQVDSKFGFDLESGQADRALEEVLANPRLKVVGLHAHIG 210

Query: 167 CENKSFLCFSAMLKN----IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---- 218
            +    + F  + K      E     F  Q   +++GGG              +      
Sbjct: 211 SQIFEVVGFEGVAKKLVDVAEHWHEEFGFQTRVLNVGGGFGIRYVQEDQPLPPEEFVDAI 270

Query: 219 -------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
                            I++EPG +IV        TV    +       V     +  ++
Sbjct: 271 IKAVKKEVAKKGLSMPAIWIEPGRSIVGPAGYSLYTVGSRKDLPGYQPFVTVDGGMGDNI 330

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L      T+Y          T  + G+ C +GDI          K GD +   D   
Sbjct: 331 RPALYQAAYETVYAKDPRQKPEETVRIAGKYCESGDILARDQALPKTKPGDLLVMLDTGA 390

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361
           Y     + +N    P +           I+  S+ D
Sbjct: 391 YGYAMASNYNRNPRPAVVFVENGHAQLVIQRESWAD 426


>gi|319942204|ref|ZP_08016520.1| diaminopimelate decarboxylase [Sutterella wadsworthensis 3_1_45B]
 gi|319804257|gb|EFW01149.1| diaminopimelate decarboxylase [Sutterella wadsworthensis 3_1_45B]
          Length = 467

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 57/391 (14%), Positives = 126/391 (32%), Gaps = 30/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +    +        A  ++  A+K  +  G+ + L     G    S  E
Sbjct: 41  GTPTYVYSRAAITERWNAYETAFGTAPHQICYAVKAASTKGILEVLAALGAGFDCVSGGE 100

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117
           ++         +   ++   K     A    +        + ++L++  + A+   L   
Sbjct: 101 ILRVLAAGGDPKKIVFSGVAKTPADIAFALTAGIKCFNIESPAELDRIANTARNLGLKAH 160

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           I +R+NP++              S+ G K  D I    K        + G+  H     +
Sbjct: 161 ISVRVNPNIDAHVDHHVATGLGDSKFGVKLTDVIALYQKAAELKEIEIEGISCHIGSLVE 220

Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTD--------KDYPVKDFCQRLK 219
           S + + + ++ +             ++   +GGG                 +     +++
Sbjct: 221 STVPYMSEIEVLSVFVNELLDRGIALKHFDIGGGAGVAYKADEKTLEPSELIPAVVAQIR 280

Query: 220 EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV--DSSVEAHVPDYLLYQE 277
              +   ++I +EPG +I+     L T V  +   +        D+S+   V   +    
Sbjct: 281 SLVKIPDIEILIEPGRSIIAQAGVLLTRVEYLKSGLFERNFCVVDASMTELVRPAMYGSH 340

Query: 278 SAT----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                     +  P    + G  C + DI G       V  GD ++      Y ++  + 
Sbjct: 341 HEIEPVSPRSDIEPERLNIVGGVCESSDILGSDRELA-VAPGDLLAIRTAGAYGMSMAST 399

Query: 334 FNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +N   +P   + +        R  +  D  +
Sbjct: 400 YNSRPLPMEVLVDGAAIRPLRRRMTALDLLS 430


>gi|329767990|ref|ZP_08259501.1| diaminopimelate decarboxylase [Gemella haemolysans M341]
 gi|328838475|gb|EGF88083.1| diaminopimelate decarboxylase [Gemella haemolysans M341]
          Length = 430

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 61/399 (15%), Positives = 130/399 (32%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D+  L+N   T +   K++    ++L A K F+   +    ++   G    SL
Sbjct: 29  GTPLYIYDENMLVNQCRTFINNFKSSKFNTEVLFASKAFSCLEVLRIASREGLGVDVVSL 88

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       +  +   ++   K  E           TI+ +   +     +  ++   +
Sbjct: 89  GEIHTAYKAGYNMKKAYFHGNNKTREELQYALEVGVGTIVIDNDYEYEMINEIVRESGNR 148

Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           +   LRIN  +           +  S+ G         E   D       N  G   H  
Sbjct: 149 VDVLLRINTGIDAHTHEYIKTAKDDSKFGYSVYDETIYELIADINNQSNLNFVGFHSHIG 208

Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD--------F 214
            +       F     +++  +K        I  ++LGGG      +             +
Sbjct: 209 SQIFEKTSFFEAVKVVMEFTKKVQERLGLTISVLNLGGGFGVYYTEEDRPFELAEFLREY 268

Query: 215 CQRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
            + ++  S+ +     ++ +EPG ++  N  +   +V  +      +  V VD  +  + 
Sbjct: 269 IEVVERESDNFGLDLTKVVIEPGRSLTCNAGSTLYSVGGVKNTFAGREYVFVDGGMADNP 328

Query: 270 PDYLLYQESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   +  N        T  V G+ C +GD+          + GD +       
Sbjct: 329 RYALYKAKYEAMLANKMNEEADTTYTVAGKCCESGDMLVMDAKLPKAEQGDLLLVSSTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           YN +  + +N +    +       +   ++  +  D   
Sbjct: 389 YNYSMSSNYNRLPKLPVVFVKDGTSRLVVKGETLEDLIR 427


>gi|227533417|ref|ZP_03963466.1| diaminopimelate decarboxylase [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|227188983|gb|EEI69050.1| diaminopimelate decarboxylase [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
          Length = 448

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 63/400 (15%), Positives = 122/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           +TP Y+ D   +   +     + + A V   +  A K FA   M++            S 
Sbjct: 26  QTPLYVYDVGAIRQQIRAFKRVFEEADVSYAVSYASKAFATIAMYEVAKSEGAHVDVVSG 85

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDK--AQKLH 115
            E+       F     +++   K       A+ +   TII +   +L+   D   A    
Sbjct: 86  GELYTAQAADFPTAAVSFHGNNKSKAELTQALDAGVGTIIVDNFHELDLLDDLLGATVGQ 145

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           + + +R+ P +S          +  S+ G         E  K  +  +  N+ G+  H  
Sbjct: 146 QDVLIRVAPGISAHTHAYDQTGQTDSKFGFDLASGQADEAAKRILADDHLNLLGIHAHIG 205

Query: 167 CENKSFLCFSAMLKNIEK----EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---- 218
            +      F A+ + +          F    + +++GGG              +      
Sbjct: 206 SQIFEVAGFEAVTQKLLHVLNNWHQQFGFIPKVLNVGGGFGIAYTKQDDPLPPEAFVKAI 265

Query: 219 -------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
                   +        I++EPG +IV        TV    +    +  V VD  +  ++
Sbjct: 266 LATLKSQSQTLNWPLPAIWIEPGRSIVGPAGYSLYTVGSRKDVPGLRPYVAVDGGMGDNI 325

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +              + G+ C +GDI  +         GD +   D   
Sbjct: 326 RPALYQATYTAVLADQPNAAPAEHVHLVGKYCESGDILIDDAPLPTTTSGDVVVVFDTGA 385

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  + +N    P +           +   +  D   N
Sbjct: 386 YGYSMASNYNRNPRPAVVFVENGQAQLVVTRETDADLIKN 425


>gi|116490819|ref|YP_810363.1| diaminopimelate decarboxylase [Oenococcus oeni PSU-1]
 gi|290890264|ref|ZP_06553343.1| hypothetical protein AWRIB429_0733 [Oenococcus oeni AWRIB429]
 gi|116091544|gb|ABJ56698.1| diaminopimelate decarboxylase [Oenococcus oeni PSU-1]
 gi|290480050|gb|EFD88695.1| hypothetical protein AWRIB429_0733 [Oenococcus oeni AWRIB429]
          Length = 427

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 63/393 (16%), Positives = 131/393 (33%), Gaps = 33/393 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D  ++ + +         +    ++  A K F+   ++D L   +    + S 
Sbjct: 23  GTPVYVYDVGQIRSIISDMKEAFDAEKLNYQISYASKAFSTVAIYDVLKHEIIHCDAVSG 82

Query: 61  YEVM-LGHEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+  +    F  +  ++N   K  D  + A+     TII +   +L+   +    +K+ 
Sbjct: 83  GEIATIAKAGFPMKNVSFNGNNKSADELMMAIDYKIGTIIVDNFHELDLLNEILSERKIS 142

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNN 166
           + + +RI+P +S          +  S+ G                 SE  N+ GL  H  
Sbjct: 143 QNVLMRISPGISAHTHKFISTGQQDSKFGFDLASGQAKKAFDKIQASEYLNLLGLHAHIG 202

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-KDYPVKDFCQRLKEFS--- 222
            +      +S ++  + K    +  Q E I +GGG               + +       
Sbjct: 203 SQIFESSGYSKLVDLLIKTASKWHFQAEIIDVGGGFGIKYTDADDPIPNAEFIHLICQTA 262

Query: 223 -------EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDYL 273
                       +I++EPG +IV        T+    +         VD  +  ++   L
Sbjct: 263 KASSRKYHAKLPEIWVEPGRSIVGPAGYSLYTIGGRKDIPGIRSYLSVDGGMGDNIRPAL 322

Query: 274 LYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
              E   +  +           + G+ C +GD+  +         GD ++      Y  +
Sbjct: 323 YQAEYKAVLVDQVDLPSEQVVRIAGKYCESGDVLIQKQELPKTYPGDLLAVLATGAYGYS 382

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
             + +N    P +           ++  +Y D 
Sbjct: 383 MASNYNRNPRPAVVFAEKGKAKLVVKRETYEDI 415


>gi|163791505|ref|ZP_02185911.1| lysA [Carnobacterium sp. AT7]
 gi|159873228|gb|EDP67326.1| lysA [Carnobacterium sp. AT7]
          Length = 437

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 60/399 (15%), Positives = 129/399 (32%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D  ++     T       +N   ++  A K F+   ++  + +        S 
Sbjct: 33  GTPLYVYDVSQIKYKARTFKKAFLDRNIKAQVAYASKAFSCLAIYQLMAKEELSLDVVSG 92

Query: 61  YEVMLGHE--KFGGETHAYNVAYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    +      + H +     D EI  A+  +    + +   +L K  +   +  +K
Sbjct: 93  GELYTAIQSNYPSKKIHFHGNNKSDAEIVAALDYDIGCFVVDNFYELKKLNEYTAQRKQK 152

Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
           +   LR+ P V           +  S+ G    +          +E    +V GL  H  
Sbjct: 153 MAILLRVTPGVEAHTHEYITTGQTDSKFGFDLDNGQAQQALELALEMPYIDVMGLHCHIG 212

Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFCQ------ 216
            +      FS  +  +  +   +       +  +++GGG              +      
Sbjct: 213 SQIFETTGFSLAIDKLLIQSKEWQELFGFHLRVLNVGGGFGIRYTAEDEPLPIEDYVNNL 272

Query: 217 -----RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHV 269
                 +    +    +I++EPG ++V +       V    +  +++N + +D  +  ++
Sbjct: 273 IDEVQSVSAKVQLPMPEIWIEPGRSLVGDAGITLYQVGSQKVIPDVRNYLAIDGGMTDNI 332

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +     A    +    T  + G+ C +GD+             D ++      
Sbjct: 333 RPALYDAKYTGVLANRVEDKVEETYSIAGKCCESGDMLIWDLPLPKADDKDILAVFSTGA 392

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y     + +N I  P +          AI+  SY D   
Sbjct: 393 YGYAMASNYNRIPRPPVVFVENGKDFLAIKRESYADLMR 431


>gi|58337158|ref|YP_193743.1| diaminopimelate decarboxylase [Lactobacillus acidophilus NCFM]
 gi|58254475|gb|AAV42712.1| diaminopimelate decarboxylase [Lactobacillus acidophilus NCFM]
          Length = 435

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 65/398 (16%), Positives = 125/398 (31%), Gaps = 38/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D  ++ N +     + +  GV   +  A K FA   M+   N+    T   S 
Sbjct: 31  GTPLVVYDVNRIRNQIRAFKKVFEEEGVSYAVSYASKAFACIAMYQVANEEGAYTDVVSA 90

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E  +++   K      +   ++   II +   ++        +   +
Sbjct: 91  GELYTALKAGFPAEKISFHGNNKSLAEIEMAVKNHVGKIIIDNFHEIELLDQVLHQYDTQ 150

Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           I   LRI P +S          +  S+ G            +  + +   N+ G+  H  
Sbjct: 151 INVMLRITPGISAHTHEYDQTGQIDSKFGFDLESGQADLALERVLANSRMNMLGIHAHIG 210

Query: 167 CENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            +      F      +++  E     +    + I++GGG              +      
Sbjct: 211 SQIFELNGFELAAKKLMEVAENWRSQYGYTAKIINVGGGFGIKYTADDNPLKPEEFVRTI 270

Query: 223 EKY-----------SVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHV 269
            +            + +I +EPG +IV        TV       +    V VD  +  ++
Sbjct: 271 IETIKKGSADAAFPTPEIDIEPGRSIVGPAGYNLYTVGSCKTIPSYSPYVAVDGGMGDNI 330

Query: 270 PDYLLYQESATIYPNTGPYTA----MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   +  N           + G+ C +GDI         VK GD ++  D   
Sbjct: 331 RPALYQAKYDVVLANNPKAPVVNRVRIAGKYCESGDILATES-LPEVKSGDVLAMLDTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
           Y  +  + +N    P +           ++  S  D  
Sbjct: 390 YGYSMASNYNRNPRPAVVFAENRKAHLVVKRESLEDLV 427


>gi|73662659|ref|YP_301440.1| diaminopimelate decarboxylase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|72495174|dbj|BAE18495.1| diaminopimelate decarboxylase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 421

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 65/394 (16%), Positives = 132/394 (33%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP ++ D+ ++ N +       K +G    +  A K F    M   + +        S 
Sbjct: 26  GTPTFVYDEVQIRNQMRRYHEAFKQSGLAYNISYASKAFTCLQMVKLVQEEGLELDVVSE 85

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    E  F  +   ++   K          S    I+ +++ ++   +  A +    
Sbjct: 86  GELYTALEAGFDPKHIHFHGNNKTKHEIQYALESKVGYIVIDSLEEIVLIERYASEEIDV 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168
           + LR+NP V           +  S+ G   K            +++  N+ G+ FH   +
Sbjct: 146 V-LRLNPGVEAHTHEFIQTGQEDSKFGLSIKHGLAIQGIEKVRDTQKLNLKGVHFHVGSQ 204

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR----------- 217
            +           +         +++ I+LGGG      +  V    +            
Sbjct: 205 IEGTEAMIETANIVINWLKANDIKVDLINLGGGFSIKYVEGDVSFPIEEGIAEITAAIKS 264

Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLY 275
           + E ++    +I +EPG +IV         V  I E  +    V     +  H+   L  
Sbjct: 265 IAEDADYPVPEIGIEPGRSIVGEAGITLYEVGTIKEIPQVNKYVSIDGGMSDHIRTALYD 324

Query: 276 QESATI---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331
            +   +     +    T  + G+ C +GDI  +       VK GD ++      Y+ +  
Sbjct: 325 AKYEALLVNRNDPKDETVTIAGKLCESGDIIIKDAQLPSTVKRGDYLAILSTGAYHYSMA 384

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + +N +  P++         + I+  S      N
Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418


>gi|315038094|ref|YP_004031662.1| diaminopimelate decarboxylase [Lactobacillus amylovorus GRL 1112]
 gi|325956547|ref|YP_004291959.1| diaminopimelate decarboxylase [Lactobacillus acidophilus 30SC]
 gi|312276227|gb|ADQ58867.1| diaminopimelate decarboxylase [Lactobacillus amylovorus GRL 1112]
 gi|325333112|gb|ADZ07020.1| diaminopimelate decarboxylase [Lactobacillus acidophilus 30SC]
          Length = 436

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 62/398 (15%), Positives = 126/398 (31%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D +++ N +     + +   V   +  A K FA   M+   N+        S 
Sbjct: 31  GTPLVVYDVEQIRNQIRAFKKVFEKEKVAYAVSYASKAFACIAMYQVANEEGAYIDVVSA 90

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+    +  F  E  +++   K      +   ++   II +   ++         Q   
Sbjct: 91  GELYTALKANFPTERISFHGNNKSLFEIEMAVKNHVGKIIIDNFHEIKLLDKVLREQDAK 150

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             + LRI P +S          +  S+ G            +  + +   N+ G+  H  
Sbjct: 151 INVMLRITPGISAHTHEYDQTGQVDSKFGFDLESGQADLALEQVLANSRMNMVGIHAHIG 210

Query: 167 CENKSFLCFSAM----LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK--------DF 214
            +      F       ++  E     +    + I++GGG                     
Sbjct: 211 SQIFELNGFEMAAKKLMEVAENWRSQYGYTAKVINVGGGFGIKYTAEDNPLKPEEFVQAI 270

Query: 215 CQRLKEFSEKYSVQIY---LEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHV 269
            + +K+ +++ +  +    +EPG +IV        T     +    +  V VD  +  ++
Sbjct: 271 VETIKKEAKEAAFPVPEIDIEPGRSIVGPAGYNLYTTGSRKVVPGYRPYVTVDGGMGDNI 330

Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +  T+              + G+ C +GDI  E       K G  ++  D   
Sbjct: 331 RPALYGAKYETVLATDPKAPLTEHVRIAGKYCESGDILAEDQALPATKSGSLLAMLDAGA 390

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
           Y  +  + +N    P +           I+  S  D  
Sbjct: 391 YGYSMASNYNRNPRPAVVFVENCKAKLVIKRESLEDLV 428


>gi|70726512|ref|YP_253426.1| diaminopimelate decarboxylase [Staphylococcus haemolyticus
           JCSC1435]
 gi|68447236|dbj|BAE04820.1| diaminopimelate decarboxylase [Staphylococcus haemolyticus
           JCSC1435]
          Length = 421

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 63/394 (15%), Positives = 130/394 (32%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D+ ++ N +       + +G+K  +  A K F    M   + +        S 
Sbjct: 26  GTPTIVYDEDEIRNQMRRYHSAFQKSGLKYNISYASKAFTCIQMVKLVQEEDLQLDVVSE 85

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    E  F      ++   K          S     + +++ +++     A      
Sbjct: 86  GELYTALEAKFDPSKIHFHGNNKTKREIQYALESGVGYFVIDSLEEIDLIDRYASDTVNV 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168
           + LR+NP V           +  S+ G   +            +S+  ++ G+ FH   +
Sbjct: 146 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIRHGLAIEAVNKVRDSKRLHLKGIHFHIGSQ 204

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ--------RLKE 220
            +         K +         ++E ++LGGG      +  V    +         +K 
Sbjct: 205 IEGTEAMIETAKIVLNWLSENDIKVELLNLGGGFGIKYVEGDVSFPIEEGIAEITDAIKA 264

Query: 221 FSEKYSVQIY---LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLY 275
            +E+ + ++    +EPG +IV         V  I E  +    V     +  H+   L  
Sbjct: 265 ETERLNYEVPEIGIEPGRSIVGEAGITLYEVGTIKEIPEVNKYVSIDGGMSDHIRTALYG 324

Query: 276 QESATI---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331
            +   +          T  + G+ C +GDI          V+ GD ++      Y+ +  
Sbjct: 325 AKYQALLVNRHEEADETVTIAGKLCESGDIIIRDAKLPSSVQRGDYLAILSTGAYHYSMA 384

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + +N +  P +         + I+  S      N
Sbjct: 385 SNYNQMQKPPVFFLKDGKAREVIKRQSLRQLIIN 418


>gi|327183372|gb|AEA31819.1| diaminopimelate decarboxylase [Lactobacillus amylovorus GRL 1118]
          Length = 436

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 63/398 (15%), Positives = 126/398 (31%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D +++ N +     + +   V   +  A K FA   M+   N+    T   S 
Sbjct: 31  GTPLVVYDVEQIRNQIRAFKKVFEKEKVAYAVSYASKAFACIAMYQVANEEGAYTDVVSA 90

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F  E  +++   K      +   ++   II +   ++         Q   
Sbjct: 91  GELYTALKANFPTERISFHGNNKSLFEIEMAVKNHVGKIIIDNFHEIKLLDKVLREQDAK 150

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             + LRI P +S          +  S+ G            +  + +   N+ G+  H  
Sbjct: 151 INVMLRITPGISAHTHEYDQTGQVDSKFGFDLESGQADLALEQVLANSRMNMVGIHAHIG 210

Query: 167 CENKSFLCFSAM----LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK--------DF 214
            +      F       ++  E     +    + I++GGG                     
Sbjct: 211 SQIFELNGFEMAAKKLMEVAENWRSQYGYTAKVINVGGGFGIKYTAEDNPLKPEEFVQAI 270

Query: 215 CQRLKEFSEKYSVQIY---LEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHV 269
            + +K+ +++ +  +    +EPG +IV        T     +    +  V VD  +  ++
Sbjct: 271 VETIKKEAKEAAFPVPEIDIEPGRSIVGPAGYNLYTTGSRKVVLGYRPYVTVDGGMGDNI 330

Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +  T+              + G+ C +GDI  E       K G  ++  D   
Sbjct: 331 RPALYGAKYETVLATDPKAPLTEHVRIAGKYCESGDILAEDQALPATKSGSLLAMLDTGA 390

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
           Y  +  + +N    P +           I+  S  D  
Sbjct: 391 YGYSMASNYNRNPRPAVVFVENCKAKLVIKRESLEDLV 428


>gi|225428408|ref|XP_002283712.1| PREDICTED: hypothetical protein isoform 1 [Vitis vinifera]
          Length = 485

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 65/387 (16%), Positives = 124/387 (32%), Gaps = 27/387 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+YL  K ++  N +      +     +  A+K      + + L +   G    S  E+ 
Sbjct: 94  PFYLYSKPQITRNFEAYKEALEGLRSIIGYAIKANNNLKILEHLRELGCGAVLVSGNELR 153

Query: 65  LG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGL 120
           L     F      +N       ++         +  ++   L+     A+       + L
Sbjct: 154 LALRAGFDPTRCIFNGNGKLLEDLVLAAQEGVFVNVDSEFDLDNIISAARIAGKKVNVLL 213

Query: 121 RINPSVSYSKFILADPNRPFSRLGE------KCKDKIESEIKNVN--GLMFHNNCENKSF 172
           RINP V              S+ G          D +++    +   G   H        
Sbjct: 214 RINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKV 273

Query: 173 LCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSEK 224
             F      +            +I ++++GGG+              +D    ++E    
Sbjct: 274 DIFRDAAVLMVNYIDEIRAQGFEISYLNIGGGLGIDYYHAGAVLPTPRDLIDTVRELVLS 333

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + + +EPG +++ NT  L   V  +  N  KN V++D S+   +   L          
Sbjct: 334 RDLNLIIEPGRSLIANTCCLVNRVTGVKTNGTKNFVVIDGSMAELIRPSLYDAYQHIELV 393

Query: 284 NTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
           +  P      T  V G  C + D  G+         G  +   D   Y ++  + +N   
Sbjct: 394 SPPPSDAQISTFDVVGPVCESADFLGKDRELPTPPRGAGLVVHDAGAYCMSMASTYNLKM 453

Query: 339 MPTIAVKNVDGTIKAIRE-FSYNDYYN 364
            P       DG++  IR   ++ D+  
Sbjct: 454 RPPEYWVEDDGSMSKIRHGETFEDHVR 480


>gi|82750991|ref|YP_416732.1| diaminopimelate decarboxylase [Staphylococcus aureus RF122]
 gi|82656522|emb|CAI80944.1| diaminopimelate decarboxylase [Staphylococcus aureus RF122]
          Length = 421

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 63/394 (15%), Positives = 126/394 (31%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D+ ++   +       K++G+K  +  A K F    M   + +        S 
Sbjct: 26  GTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTCIQMVKLVAEEDLQLDVVSE 85

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    E  F      ++   K          +N    + +++ ++      A    + 
Sbjct: 86  GELYRALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVIDSLEEIELIDRYANDTVQV 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168
           + LR+NP V           +  S+ G   +         +  +S+   + G+  H   +
Sbjct: 146 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAKKAINNVQQSKYLKLKGVHCHIGSQ 204

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
            +    F    K + +       Q+E ++LGGG      +       +   +        
Sbjct: 205 IEGTEAFIETAKIVLRWLKEQGIQVELLNLGGGFGIKYVEGDESFPIESGIKDITDAIKS 264

Query: 229 IY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274
                        +EPG +IV         V  I E  +    V     +  H+   L  
Sbjct: 265 EIKFLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKEIPEINKYVSIDGGMSDHIRTALYD 324

Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331
             YQ            +  + G+ C +GDI  +       VK GD ++      Y+ +  
Sbjct: 325 AKYQALLVNRNEEADDSVTIAGKLCESGDIIIKDAKLPSSVKRGDYLAILSTGAYHYSMA 384

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + +N +  P++         + I+  S      N
Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418


>gi|314936454|ref|ZP_07843801.1| diaminopimelate decarboxylase [Staphylococcus hominis subsp.
           hominis C80]
 gi|313655073|gb|EFS18818.1| diaminopimelate decarboxylase [Staphylococcus hominis subsp.
           hominis C80]
          Length = 421

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 64/394 (16%), Positives = 127/394 (32%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + ++ ++ N +       + +G+K  +  A K F    M   + +        S 
Sbjct: 26  GTPTIVYNEDEIRNQMRRFHNAFQKSGLKYNISYASKAFTCIQMVKLVQEENLQLDVVSE 85

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    E  F      ++   K          S     + +++ ++      A      
Sbjct: 86  GELYTALEAKFDPSRIHFHGNNKTKREIQYALESGVGYFVIDSLEEIELIDRYASDTVNV 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168
           + +R+NP V           +  S+ G   +             S+  ++ G+ FH   +
Sbjct: 146 V-IRVNPGVEAHTHEFIQTGQEDSKFGLSIRHGLAIQAVEKVKASKHLHLKGIHFHVGSQ 204

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ--------RLKE 220
            +         K +         Q+E ++LGGG      +  V    +         +K 
Sbjct: 205 IEGTEAMIETAKIVLNWLNEHHIQVELLNLGGGFGIKYVEGDVSFPIEEGIAEITDAIKS 264

Query: 221 FSEKYSVQIY---LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLY 275
            SEK +  +    +EPG +IV         V  I +  +    V     +  H+   L  
Sbjct: 265 ESEKLNYDVPEIGIEPGRSIVGEAGITLYEVGTIKDIPEVNKYVSIDGGMSDHIRTALYG 324

Query: 276 QESATI---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331
            +   +          T  + G+ C +GDI          VK GD ++      Y+ +  
Sbjct: 325 AKYQALLVNRHEEADETVTIAGKLCESGDIIIRDAMLPSSVKRGDYLAILSTGAYHYSMA 384

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + +N +  P +         + I+  S      N
Sbjct: 385 SNYNQMQKPPVFFLKDGKAREVIKRQSLRQLIIN 418


>gi|118587069|ref|ZP_01544499.1| lysine biosynthesis diaminopimelate decarboxylase [Oenococcus oeni
           ATCC BAA-1163]
 gi|118432479|gb|EAV39215.1| lysine biosynthesis diaminopimelate decarboxylase [Oenococcus oeni
           ATCC BAA-1163]
          Length = 427

 Score =  213 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 63/393 (16%), Positives = 130/393 (33%), Gaps = 33/393 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D  ++ + +         +    ++  A K F+   ++D L   +    + S 
Sbjct: 23  GTPVYVYDVGQIRSIISDMKEAFDAEKLNYQISYASKAFSTVAIYDVLKHEIIHCDAVSG 82

Query: 61  YEVM-LGHEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+  +    F  +  ++N   K  D    A+     TII +   +L+   +    +K+ 
Sbjct: 83  GEIATIAKAGFPMKNVSFNGNNKSADELRMAIDYKIGTIIVDNFHELDLLNEILSERKIS 142

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNN 166
           + + +RI+P +S          +  S+ G                 SE  N+ GL  H  
Sbjct: 143 QNVLMRISPGISAHTHKFISTGQQDSKFGFDLASGQAKKAFDKIQASEYLNLLGLHAHIG 202

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-KDYPVKDFCQRLKEFS--- 222
            +      +S ++  + K    +  Q E I +GGG               + +       
Sbjct: 203 SQIFESSGYSKLVDLLIKTASKWHFQAEIIDVGGGFGIKYTDADDPIPNAEFIHLICQTA 262

Query: 223 -------EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDYL 273
                       +I++EPG +IV        T+    +         VD  +  ++   L
Sbjct: 263 KASSRKYHAKLPEIWVEPGRSIVGPAGYSLYTIGGRKDIPGIRSYLSVDGGMGDNIRPAL 322

Query: 274 LYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
              E   +  +           + G+ C +GD+  +         GD ++      Y  +
Sbjct: 323 YQAEYKAVLVDQVDLPSEQVVRIAGKYCESGDVLIQKQELPKTYPGDLLAVLATGAYGYS 382

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
             + +N    P +           ++  +Y D 
Sbjct: 383 MASNYNRNPRPAVVFAEKGKAKLVVKRETYEDI 415


>gi|229177926|ref|ZP_04305298.1| Diaminopimelate decarboxylase [Bacillus cereus 172560W]
 gi|228605414|gb|EEK62863.1| Diaminopimelate decarboxylase [Bacillus cereus 172560W]
          Length = 438

 Score =  213 bits (541), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 59/400 (14%), Positives = 121/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 30  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+       F      ++   K  E    A+ +N    + +   +L    D A +    
Sbjct: 90  GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFFELEVLHDLAMQHGKF 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G    +          ++    NV G+  H  
Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIGFALQKSNYNVLGIHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F   ++ + +            ++ +++GGG      +              
Sbjct: 210 SQIFETAGFVRAIEVLRQFLVEVREQTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +      E    +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 270 TSAVREQFTVCEYPLPEIWVEPGRSIVGDAGTTLYTVGSVKDIPGIRKYVSVDGGMTDNL 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +       + G+ C +GD+         V   D ++      
Sbjct: 330 RPALYSARYEAMLANRGNDENEELVSIAGKCCESGDMLIWDIHLPKVVASDLLAVSCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGN 429


>gi|169628525|ref|YP_001702174.1| diaminopimelate decarboxylase [Mycobacterium abscessus ATCC 19977]
 gi|169240492|emb|CAM61520.1| Probable diaminopimelate decarboxylase [Mycobacterium abscessus]
          Length = 470

 Score =  213 bits (541), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 60/405 (14%), Positives = 120/405 (29%), Gaps = 44/405 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ID+    +           A  ++  A K F    +   +     G    S  E
Sbjct: 62  GTPLFVIDEDDFRSRCRDMAAAFGGA-ARVHYASKAFLCTEVARWIKDEGLGLDVCSAGE 120

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +    +F  E  A +   K       AV +    I+ +++ ++++    A +    + 
Sbjct: 121 LAVALRAEFPPERIALHGNNKSEAELAQAVQAGVGHIVVDSMIEIDRLDAIAGRAGVVQD 180

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G         E  +    ++   + GL  H   +
Sbjct: 181 VLVRVTVGVEAHTHEFISTAHEDQKFGLSLAGGQALEAVRRVFATDNLRLVGLHSHIGSQ 240

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEW--------ISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F      +       + +           I LGGG+  +          + L  
Sbjct: 241 IFDVDGFEVAAHRVIGLLRDVVAEFGTDKTAQLNIIDLGGGLGISYVPSDDPPPIEDLAA 300

Query: 221 FSEKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDIS-----ENIKNLVIVDSS 264
                             ++ +EPG AI    T     V            +  V VD  
Sbjct: 301 KLGVIVRTESALAGLPGPRLVIEPGRAIAGPGTVTLYRVGTTKDVILSNGQRRYVSVDGG 360

Query: 265 VEAHVPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRIS 319
           +  ++   L   E      +      P  + V G+ C +GDI     +    V  GD ++
Sbjct: 361 MSDNIRTSLYQAEYHPQLVSRDSDVAPVLSRVVGKHCESGDIVVRDAWLPEDVAPGDLLA 420

Query: 320 FEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
                 Y  +  + +N +  P +           +R  +  D  +
Sbjct: 421 VAATGAYCYSMSSRYNLLTRPAVIAVKDGRARLILRRETVEDLVS 465


>gi|90578911|ref|ZP_01234721.1| Diaminopimelate decarboxylase [Vibrio angustum S14]
 gi|90439744|gb|EAS64925.1| Diaminopimelate decarboxylase [Vibrio angustum S14]
          Length = 366

 Score =  213 bits (541), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 168/361 (46%), Positives = 241/361 (66%), Gaps = 3/361 (0%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE 68
           ID+QKL+NNL+ A  +++ +GVKL+LALKCF+ WG+FD +  Y+DGTTSS  +EV LG E
Sbjct: 2   IDEQKLINNLEQAKKLKQLSGVKLVLALKCFSTWGVFDVMKPYLDGTTSSGPFEVRLGAE 61

Query: 69  KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY 128
           KFGGETHAY+V Y   +++ VL +C+ IIFN+VSQL   +  A      +GLR+NP +S 
Sbjct: 62  KFGGETHAYSVGYSQEDVEEVLEHCNKIIFNSVSQLQAHRHLADGKA-SVGLRLNPGISC 120

Query: 129 SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH 188
           +   LADP R +SRLG +     +    +++G MFH NCENKS   F A+L +I + FG 
Sbjct: 121 AGQDLADPARQYSRLGVQENLLTDELFDDLDGAMFHMNCENKSADAFIALLDSISERFGR 180

Query: 189 FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248
           ++ +++W+SLGGG+ +T  DY ++     LK F+ +++VQ+YLEPGEAI+T T  L  TV
Sbjct: 181 YLEKLDWVSLGGGVFYTWPDYELEKLSLALKAFASRFNVQLYLEPGEAIITQTADLVVTV 240

Query: 249 LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLAGDIFGEF 306
           +DI EN     IVDS+ EAH  D L+Y E ATI      G Y  ++   SCLAGD F   
Sbjct: 241 VDIVENGMKTAIVDSATEAHRLDTLIYNEPATISEASEKGSYQYVIGSCSCLAGDQFCVA 300

Query: 307 HFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366
           +FE+P+ IG ++   D AGY + + NWFNG+ MP+I  + +DG ++ + EF+Y D+ ++L
Sbjct: 301 NFEQPLVIGQKLHIADSAGYTMVKLNWFNGLRMPSIYCRRIDGGVEKLNEFTYQDFESSL 360

Query: 367 S 367
           S
Sbjct: 361 S 361


>gi|227364750|ref|ZP_03848799.1| diaminopimelate decarboxylase [Lactobacillus reuteri MM2-3]
 gi|325682623|ref|ZP_08162140.1| diaminopimelate decarboxylase [Lactobacillus reuteri MM4-1A]
 gi|227070209|gb|EEI08583.1| diaminopimelate decarboxylase [Lactobacillus reuteri MM2-3]
 gi|324978462|gb|EGC15412.1| diaminopimelate decarboxylase [Lactobacillus reuteri MM4-1A]
          Length = 441

 Score =  213 bits (541), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 70/398 (17%), Positives = 128/398 (32%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D Q++ N +     + +   V   +  A K F+A  M+  +          S 
Sbjct: 36  GTPLVVYDVQQIRNQIRAFKQVFEENSVDYAVSYASKAFSAIAMYQVVAAEGAHVDVVSG 95

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F     +++   K  E   +    +  TI+ +   ++    D       H
Sbjct: 96  GELYTAIKAGFPMANVSFHGNNKSREELEMAIDHHVGTIMIDNFHEIELLADVLEEHDAH 155

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             + LRI P +S          +  S+ G         E     +E+    + GL  H  
Sbjct: 156 VDVMLRITPGISAHTNKYIQTGQVDSKFGFDLQSGQADEALTKVLENPRMQMKGLHAHIG 215

Query: 167 CENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK--------DF 214
            +      F      +++        F  Q   I++GGG                     
Sbjct: 216 SQIFELAGFEGVAKKLVEVAAHWQEKFNYQAAVINVGGGFGIRYVKDDTPLAPEEFVAAI 275

Query: 215 CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
            + +K   ++       I++EPG +I         TV    +    K  V VD  +  ++
Sbjct: 276 IKAIKTEIKETNLAMPAIWIEPGRSIAGPAGYNLYTVGSRKDVPGLKPYVTVDGGMGDNI 335

Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +  T+  N           V G+ C +GDI  +       K GD ++  D   
Sbjct: 336 RPALYEAQYETVLANNPRAELVEHVRVAGKYCESGDILSQNQALPATKPGDVLAMLDTGA 395

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
           Y  +  + +N    P +           I+  +Y+D  
Sbjct: 396 YGYSMASNYNRNPRPAVVFAEKGTAQVVIKRETYDDLI 433


>gi|148543846|ref|YP_001271216.1| diaminopimelate decarboxylase [Lactobacillus reuteri DSM 20016]
 gi|184153247|ref|YP_001841588.1| diaminopimelate decarboxylase [Lactobacillus reuteri JCM 1112]
 gi|148530880|gb|ABQ82879.1| diaminopimelate decarboxylase [Lactobacillus reuteri DSM 20016]
 gi|183224591|dbj|BAG25108.1| diaminopimelate decarboxylase [Lactobacillus reuteri JCM 1112]
          Length = 436

 Score =  213 bits (541), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 70/398 (17%), Positives = 128/398 (32%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D Q++ N +     + +   V   +  A K F+A  M+  +          S 
Sbjct: 31  GTPLVVYDVQQIRNQIRAFKQVFEENSVDYAVSYASKAFSAIAMYQVVAAEGAHVDVVSG 90

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F     +++   K  E   +    +  TI+ +   ++    D       H
Sbjct: 91  GELYTAIKAGFPMANVSFHGNNKSREELEMAIDHHVGTIMIDNFHEIELLADVLEEHDAH 150

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             + LRI P +S          +  S+ G         E     +E+    + GL  H  
Sbjct: 151 VDVMLRITPGISAHTNKYIQTGQVDSKFGFDLQSGQADEALTKVLENPRMQMKGLHAHIG 210

Query: 167 CENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK--------DF 214
            +      F      +++        F  Q   I++GGG                     
Sbjct: 211 SQIFELAGFEGVAKKLVEVAAHWQEKFNYQAAVINVGGGFGIRYVKDDTPLAPEEFVAAI 270

Query: 215 CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
            + +K   ++       I++EPG +I         TV    +    K  V VD  +  ++
Sbjct: 271 IKAIKTEIKETNLAMPAIWIEPGRSIAGPAGYNLYTVGSRKDVPGLKPYVTVDGGMGDNI 330

Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +  T+  N           V G+ C +GDI  +       K GD ++  D   
Sbjct: 331 RPALYEAQYETVLANNPRAELVEHVRVAGKYCESGDILSQNQALPATKPGDVLAMLDTGA 390

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
           Y  +  + +N    P +           I+  +Y+D  
Sbjct: 391 YGYSMASNYNRNPRPAVVFAEKGTAQVVIKRETYDDLI 428


>gi|241888591|ref|ZP_04775898.1| diaminopimelate decarboxylase [Gemella haemolysans ATCC 10379]
 gi|241864614|gb|EER68989.1| diaminopimelate decarboxylase [Gemella haemolysans ATCC 10379]
          Length = 430

 Score =  213 bits (541), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 60/399 (15%), Positives = 127/399 (31%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D+  L+N   T +   K++    ++L A K F+   +    N+   G    SL
Sbjct: 29  GTPLYVYDENMLVNQCRTFINNFKSSRFSTEVLFASKAFSCLEVLRIANREGLGVDVVSL 88

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK- 116
            E+       +      ++   K  E           TI+ +   +        ++    
Sbjct: 89  GEIHTAYKAGYDMRRAYFHGNNKTREELQYALEVGVGTIVIDNNYEYEMINKIVRESGNT 148

Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             + LRIN  +           +  S+ G         +   D       N  G   H  
Sbjct: 149 VDVLLRINTGIDAHTHEYIKTAKDDSKFGYSVYDETIYDLIADINNQSNLNFVGFHSHIG 208

Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD--------F 214
            +       F     +++   +        I  ++LGGG      +             +
Sbjct: 209 SQIFEKTSFFEAVKVVMEFTRRVQERLGLTISVLNLGGGFGVYYTEEDRPFELAEFLREY 268

Query: 215 CQRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
            + ++  S+ +     ++ +EPG ++  N  +   +V  + +    +  V VD  +  + 
Sbjct: 269 IEVVERESDNFGLDLTKVVIEPGRSLTCNAGSTLYSVGGVKKTFAGREYVFVDGGMADNP 328

Query: 270 PDYLLYQESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   +  N        T  V G+ C +GD+          + GD +       
Sbjct: 329 RYALYKAKYEAMLANKMNEEADATYTVAGKCCESGDMLVMDAKLPRAEQGDLLLVSSTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           YN +  + +N +    +       +   ++  +  D   
Sbjct: 389 YNYSMSSNYNRLPKLPVVFVKDGTSRLVVKGETLEDLIR 427


>gi|239982304|ref|ZP_04704828.1| putative diaminopimelate decarboxylase [Streptomyces albus J1074]
 gi|291454149|ref|ZP_06593539.1| diaminopimelate decarboxylase [Streptomyces albus J1074]
 gi|291357098|gb|EFE84000.1| diaminopimelate decarboxylase [Streptomyces albus J1074]
          Length = 463

 Score =  213 bits (541), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 58/398 (14%), Positives = 121/398 (30%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP + +D+                A   +  A K F +  +   L++        S  E
Sbjct: 63  GTPAFFLDETDFRARCRAWRDAF-GADADVFYAGKAFLSRAVVRWLHEEGLNLDVCSGGE 121

Query: 63  VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +             A++   K       AV +    I+ ++  ++ +    A +L   + 
Sbjct: 122 LATALDAGMPAARIAFHGNNKTTAEIRRAVEAGVGRIVLDSFEEIVRVAHVADELGVRQP 181

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G         E  +  ++ +   + G+  H   +
Sbjct: 182 VQIRVTVGVEAHTHEFIATAHEDQKFGLALAGGQAAEAVRRALKLDGLELIGIHSHIGSQ 241

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F      +++ + +       ++  I LGGG+               + +   +
Sbjct: 242 IFDMAGFEVSARRVVQLLAEVRDEHGVELPEIDLGGGLGIAYTSDDDPREPHEIAKALGE 301

Query: 225 YSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271
              +             +EPG AIV  T      V  +      +  V VD  +  ++  
Sbjct: 302 IVTRECESAGLATPRISVEPGRAIVGPTAFTLYEVGTVKPLEGLRTYVSVDGGMSDNIRT 361

Query: 272 YLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326
            L   E     A+   +  P    V G+ C +GDI     F    +  GD ++      Y
Sbjct: 362 ALYDAEYTVTLASRTSDAEPMLVRVVGKHCESGDIVVRDAFLPADLAPGDLLAVPATGAY 421

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N    P +   +       +R  +  D   
Sbjct: 422 CRSMASNYNHALRPPVVAVDEGAARVVVRRETEEDLLR 459


>gi|225465560|ref|XP_002275012.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 564

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 65/387 (16%), Positives = 125/387 (32%), Gaps = 27/387 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+YL  K ++  N +      +     +  A+K      + + L +   G    S  E+ 
Sbjct: 173 PFYLYSKPQIARNFEAYREALEGLRSIIGYAIKANNNLKILEHLRELGCGAVLVSGNELR 232

Query: 65  LG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGL 120
           L     F      +N       ++         +  ++   L+     A+       + L
Sbjct: 233 LALRAGFDPTRCIFNGNGKLLEDLVLAAQEGVFVNVDSEFDLDNIISAARIAGKKVNVLL 292

Query: 121 RINPSVSYSKFILADPNRPFSRLGE------KCKDKIESEIKNVN--GLMFHNNCENKSF 172
           RINP V              S+ G          D +++    +   G   H        
Sbjct: 293 RINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKV 352

Query: 173 LCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSEK 224
             F      +            +I ++++GGG+              +D    ++E    
Sbjct: 353 DIFRDAAVLMVNYIDEIRAQGFEISYLNIGGGLGIDYYHAGAVLPTPRDLIDTVRELVLS 412

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + + +EPG +++ NT  L   V+ +  N  KN V++D S+   +   L          
Sbjct: 413 RDLNLIIEPGRSLIANTCCLVNRVIGVKTNGTKNFVVIDGSMAELIRPSLYDAYQHIELV 472

Query: 284 NTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
           +  P      T  V G  C + D  G+         G  +   D   Y ++  + +N   
Sbjct: 473 SPPPSDAQISTFDVVGPVCESADFLGKDRELPTPPRGAGLVVHDAGAYCMSMASSYNLKM 532

Query: 339 MPTIAVKNVDGTIKAIRE-FSYNDYYN 364
            P       DG++  IR   ++ D+  
Sbjct: 533 RPPEYWVEDDGSVSKIRHGETFEDHVR 559


>gi|57237365|ref|YP_178378.1| diaminopimelate decarboxylase [Campylobacter jejuni RM1221]
 gi|57166169|gb|AAW34948.1| diaminopimelate decarboxylase [Campylobacter jejuni RM1221]
          Length = 402

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 57/379 (15%), Positives = 123/379 (32%), Gaps = 22/379 (5%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+Y+ +   +           K    ++  A+K  +   +   L     G    S+ EV
Sbjct: 12  TPFYIYNFDFIKECFLNLKEAFKARKSQIFYAVKANSNLSLLQMLANLDSGFDCVSIGEV 71

Query: 64  MLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
                         ++   K  +    A+  +   I   + +++   +  A++L+ K  +
Sbjct: 72  KRALKAGAKAYKIIFSGVGKTKEELRQALEYDILYINLESEAEMMLLESVAKELNLKARI 131

Query: 121 --RINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCE--- 168
             R+NP+V              ++ G +             S      G+ FH   +   
Sbjct: 132 SIRVNPNVDAKTHPYISTGLNENKFGVEIDIARKMYLYAKNSSFLEPVGVHFHIGSQLLD 191

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK 224
                  + ++  + +E       +++  +GGG+    +       + D+ Q +      
Sbjct: 192 ISPIHEAAGIVAKLVRELKALQIDLKFFDIGGGLGVAYEKDECESDLYDYAQGILAQLHG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I +EPG  +V  +     +VL       K  V+VD ++   +   L       I P
Sbjct: 252 LDLTIGMEPGRYLVAKSGEFVCSVLYEKQNKTKRFVVVDGAMNDLIRPSLYEAYHEIILP 311

Query: 284 NTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                     V G  C +GD F +       + GD +  ++   Y  +  + +N  N   
Sbjct: 312 YNQAQESLCDVVGGICESGDFFAKARSLPSTQSGDIMVIKNTGAYGFSMSSNYNTRNKVC 371

Query: 342 IAVKNVDGTIKAIREFSYN 360
                        +  ++ 
Sbjct: 372 ELALEEGQVRLIRQRENFE 390


>gi|145219513|ref|YP_001130222.1| diaminopimelate decarboxylase [Prosthecochloris vibrioformis DSM
           265]
 gi|145205677|gb|ABP36720.1| diaminopimelate decarboxylase [Chlorobium phaeovibrioides DSM 265]
          Length = 422

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 60/383 (15%), Positives = 120/383 (31%), Gaps = 23/383 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  ++ L+ +         +       ++K      +     +   G   +S  E
Sbjct: 29  GTPLYVTSRRSLVESYREFEAAFASLPHLTCYSVKANFNLNVIREFGELGAGCDVNSGGE 88

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117
           +          E        K  +  A    S    +   ++S+L      A +  +   
Sbjct: 89  LYRALQAGVPSERIIVAGVGKRPDEIAYALKSGVLLLKVESLSELRAIDRIAGEEGVVAS 148

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENK 170
           + LR+NP+V+              + G    +               + GL  H   +  
Sbjct: 149 VALRVNPNVTAETHPYITTGDSKEKFGIDEAELPGIFSLLGSLHNVRLIGLDMHIGSQIF 208

Query: 171 SFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSE 223
               + A L  +   F +       IE++ +GGG   T         ++ F ++L    +
Sbjct: 209 DTEFYVAALTKLLDVFSYARGAGFAIEYLDIGGGFPVTYDPMKPATAIERFAEKLVPMLK 268

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDI--SENIKNLVIVDSSVEAHVPDYLLYQESAT- 280
           +   ++ LEPG  +V N+T L + +L    +   K   +VD+ +   +   L        
Sbjct: 269 ETGAKVILEPGRFLVANSTVLLSKILYKKSNHTGKKFFVVDAGMTELIRPALYQSHHEVL 328

Query: 281 -IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            +  +     A V G  C + D F           G  ++      Y     + +NG   
Sbjct: 329 SVRQHDQRVVADVVGPVCESSDFFARGREIDDAPEGGLLAVMSCGAYAAVMASNYNGRLR 388

Query: 340 PTIAVKNVDGTIKAIREFSYNDY 362
           P   + +        R  +    
Sbjct: 389 PAEVMVDGGEPRLMRRRETLEQL 411


>gi|323489651|ref|ZP_08094878.1| diaminopimelate decarboxylase [Planococcus donghaensis MPA1U2]
 gi|323396782|gb|EGA89601.1| diaminopimelate decarboxylase [Planococcus donghaensis MPA1U2]
          Length = 440

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 60/399 (15%), Positives = 127/399 (31%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D Q   +         + AG   ++  A K F+   ++    +        S 
Sbjct: 30  GTPLYVYDIQLFRDRAKAFQETFEKAGIGYQVAYASKAFSTIAIYQVAAEEKLSLDVVSA 89

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E   ++   K  E   +        I+ +   ++   K  ++KL + 
Sbjct: 90  GELYTAVKAGFPVEKIHFHGNNKSMEELQMAFEVGIGCIVVDNFYEIELLKKLSEKLKQP 149

Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
           +   LR+ P +           +  S+ G            +   +    N+ GL  H  
Sbjct: 150 MNILLRVTPGIEAHTHDYITTGQEDSKFGFDLKNGQADRAFEQTFDHNYLNLLGLHCHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWIS----LGGGIHFTDKDYPVK--------DF 214
            +      F    + + ++   +  Q  +      LGGG      +              
Sbjct: 210 SQIFDTGAFQLASEKLMQKMASWKEQFNYTCPVLNLGGGFGIRYTEEDTPLEPAVYVEQM 269

Query: 215 CQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269
            + +K+ +      I   ++EPG +++ +  T   T+    E         VD  +  ++
Sbjct: 270 IETVKQTANASGYPIPEIWIEPGRSLIGDAGTTLYTIGSTKEVPGTRKYAAVDGGMSDNI 329

Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   + +++  N           + G+ C +GD   E      V  GD +       
Sbjct: 330 RPALYGAKYSSVIANNANAQLTEQYTIAGKCCESGDKLIEQAELPAVAAGDILGIFCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  + +N I  P +       +   ++  + +D   
Sbjct: 390 YGYSMASNYNRIARPAVVFVENGVSQLVVKRETNDDLIK 428


>gi|224103381|ref|XP_002313033.1| predicted protein [Populus trichocarpa]
 gi|222849441|gb|EEE86988.1| predicted protein [Populus trichocarpa]
          Length = 482

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 63/387 (16%), Positives = 124/387 (32%), Gaps = 27/387 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+YL  K ++  N++      +     +  A+K      + + L     G    S  E+ 
Sbjct: 91  PFYLYSKPQITRNVEAYKDALQGLSSIIGYAIKANNNLKILEHLRGLGCGAVLVSGNELR 150

Query: 65  LG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGL 120
           L     F      +N       ++         +  ++   L      A+       + L
Sbjct: 151 LALRAGFDPTRCIFNGNGKLLDDLVLAAQEGVFVNVDSEFDLENIVAAARIAGKKVNVLL 210

Query: 121 RINPSVSYSKFILADPNRPFSRLGE------KCKDKIESEIKNVN--GLMFHNNCENKSF 172
           RINP V              S+ G          D +++    +   G   H        
Sbjct: 211 RINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKV 270

Query: 173 LCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSEK 224
             F      +            +++++++GGG+              +D    ++E    
Sbjct: 271 DIFRDAAALMVNYIDEIRAQGFEVDYLNIGGGLGIDYYHSGAVLPTPRDLIDTVRELVLS 330

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + + +EPG +++ NT  L   V  +  N  KN V++D S+   +   L          
Sbjct: 331 RDLNLIIEPGRSLIANTCCLVNRVTGVKTNGTKNFVVIDGSMAELIRPSLYDAYQHIELV 390

Query: 284 NTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
           +         T  V G  C + D  G+         G  +   D   Y ++  + +N   
Sbjct: 391 SPASPSAEVSTFDVVGPVCESADFLGKDRELPTPAKGAGLVVHDAGAYCMSMASTYNLKM 450

Query: 339 MPTIAVKNVDGTIKAIRE-FSYNDYYN 364
            P       DG++  IR+  ++ D+  
Sbjct: 451 RPPEYWVEDDGSVSKIRQGETFEDHIR 477


>gi|315641453|ref|ZP_07896525.1| diaminopimelate decarboxylase [Enterococcus italicus DSM 15952]
 gi|315482741|gb|EFU73265.1| diaminopimelate decarboxylase [Enterococcus italicus DSM 15952]
          Length = 430

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 62/400 (15%), Positives = 128/400 (32%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALY--IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+  +  +           I+K   V++  A K F    M   + +        S 
Sbjct: 23  GTPLYVFSESMIEQACRELQRDFIQKYERVRVAYASKAFNVLAMLKLVEKEGLCLDVVSG 82

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKLHK- 116
            E+       F  E   +N   K      +A+       I +++ +L+  +   ++  + 
Sbjct: 83  GELYTAIAADFEPEKIEFNGNNKSVAELEEALDYGVGRFIIDSMQELDLIQHICREKKQT 142

Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
            K+  RI P ++          +  S+ G            K  I++   +  G+ FH  
Sbjct: 143 AKVLFRITPEITVQTHRYISTGQKDSKFGIPLDEKVLFPLIKQAIDAPEIDFYGIHFHIG 202

Query: 167 CE----NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            +           +  L  +++    F  +++ ++ GGG         V+       +  
Sbjct: 203 SQLADNQTHLAAANVALNLVKQIKERFDYEVKELNYGGGFGVRYTKADVRQPYAYFLDPL 262

Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269
            +           Y   I +EPG +IV        T+  I +         +D  +  ++
Sbjct: 263 MEATITFCEEHQLYRPTIVIEPGRSIVAEAGITLHTIGSIKQLPGIRTYASIDGGMTDNI 322

Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +      N           + G+ C + DI  +      V  GD ++      
Sbjct: 323 RPGLYQAQYEVAIANKQTDQDLEPVTISGKICESTDILVKDALLPKVATGDILATYTTGA 382

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  + +N I +P +         + ++  SY     N
Sbjct: 383 YGYSMASNYNKIAIPAVIFVKEGRAEEVVKRQSYQQMIQN 422


>gi|297618779|ref|YP_003706884.1| diaminopimelate decarboxylase [Methanococcus voltae A3]
 gi|297377756|gb|ADI35911.1| diaminopimelate decarboxylase [Methanococcus voltae A3]
          Length = 444

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 64/399 (16%), Positives = 126/399 (31%), Gaps = 36/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR----KNAGVKLLL--ALKCFAAWGMFDTLNQYMDGTT 56
            TP Y++ + ++ NN +          +  G +++   A K      +   LN+   G  
Sbjct: 38  GTPLYIMSETQIKNNFEKYTQAFNRYTEETGKEVIFSFAYKANTNLAITTLLNKMGCGAD 97

Query: 57  SSSLYEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF----KDKA 111
             S  E+ +    K       +N   K  E   +    D   FN     +        K 
Sbjct: 98  VVSSGELYIAKLSKVPSNKIVFNGNCKLVEEIKMGIETDIRAFNVDGISDLILINETAKE 157

Query: 112 QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLM 162
                 +  R+NP+V              ++ G   +D          +E E  NV G+ 
Sbjct: 158 MGKIANVSFRVNPNVDPKTHPKISTGLKKNKFGLDIEDGTALKAIKMALEMENVNVVGIH 217

Query: 163 FHNNCENKSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK 219
            H   +      F      + +          ++  +++GGG+               L 
Sbjct: 218 CHIGSQLTQIDPFIEEANKLMEFIVSLSEEGIKMRDLNIGGGLGIPYDKNTKIPVQDDLA 277

Query: 220 EFSEKYSVQI---------YLEPGEAIVTNTTTLNTTVLDISENIK-NLVIVDSSVEAHV 269
           +      +            +EPG +IV  +  L    +   E    N +++D+ +   +
Sbjct: 278 KAVIDTIMTYSDKIELPNLIIEPGRSIVGTSGILVGKTIHRKETKVANWIMIDAGMNDMM 337

Query: 270 PDYLLYQES---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
              +                     + G  C + D+FG+      +++GD ++  DV  Y
Sbjct: 338 RPAIYEAYHEITPCTIREGTEEVLNIAGGLCESSDVFGKDRKIPTIQVGDYVAVLDVGAY 397

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            I+  N +N    P + + N +         S +D    
Sbjct: 398 GISMANNYNSRGKPAMVLTNENEISLIRERESLSDLIAK 436


>gi|325289969|ref|YP_004266150.1| diaminopimelate decarboxylase [Syntrophobotulus glycolicus DSM
           8271]
 gi|324965370|gb|ADY56149.1| diaminopimelate decarboxylase [Syntrophobotulus glycolicus DSM
           8271]
          Length = 417

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 77/393 (19%), Positives = 123/393 (31%), Gaps = 30/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +  N    L     N G K   A+K      +   L +   G   SSL 
Sbjct: 21  GTPFHLYDEKAIRENARRFLKAFSWNPGFKEYYAVKAAPNPYLLKILAEEGIGADCSSLS 80

Query: 62  EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E++L       GE   +        E          I  + +S ++        + + I 
Sbjct: 81  ELILAEKTGITGENIVFTSNDTPANEFVKAKELGALINLDDISHIDFIHQH-IGMPEMIC 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSFL 173
            R NP    S       N   ++ G   +   E   K  +      G+         +  
Sbjct: 140 FRYNPGPLRSGGNAIIGNPEEAKYGVTREQLFECYAKARSLGAKRFGIHTMIISNELNPD 199

Query: 174 CF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
            F      M + + +        IE++ LGGGI    +        + L     K    +
Sbjct: 200 FFIETARMMFQLVAEIKEKLDINIEFVDLGGGIGIPYRPEDTAVDLEYLGREIHKVYDDM 259

Query: 230 Y-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                       +E G  I      L   VL   E  KN + +D+ +   +   L     
Sbjct: 260 IAAKHLHPLKLAVECGRMITGPYGYLVAKVLHKKEIYKNYIGLDACMADLMRPALYGSYH 319

Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
               P         T  V G  C   D F       P+  GD I   D   +       +
Sbjct: 320 HLTVPGKQDLPYDQTYDVTGSLCENNDKFAVDRSLPPLDPGDLIIIHDAGAHGHAMGFNY 379

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       +   DG+I+ IR   + +DY+  L
Sbjct: 380 NGKLRSQELLLKEDGSIQLIRRAETIDDYFATL 412


>gi|83591736|ref|YP_425488.1| diaminopimelate decarboxylase [Rhodospirillum rubrum ATCC 11170]
 gi|83574650|gb|ABC21201.1| diaminopimelate decarboxylase [Rhodospirillum rubrum ATCC 11170]
          Length = 425

 Score =  212 bits (540), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 62/387 (16%), Positives = 112/387 (28%), Gaps = 26/387 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+     L  +            + L  A K      +   L     G    S  
Sbjct: 25  VGTPFYVYSAATLERHFRVFSDAFAGQPITLCFATKTNGNKAVLALLAGLGAGADVVSQG 84

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HK 116
           E+              ++   K     A         I   +  +L    + AQ L    
Sbjct: 85  EMEHALAAGVPAGRIVFSGVAKTKAEMAAALEAGIFQINVESEPELEALSEVAQALGKTA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCEN 169
            + LRINP V+ +        R  ++ G                    V G+  H   + 
Sbjct: 145 PVALRINPDVAAATHDKIATGRKENKFGIDWTVAPAIFAKAAGLPGIAVKGVAVHIGSQI 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVK-----DFCQRLKEF 221
                F    + + +           +E + LGGG+               ++    +  
Sbjct: 205 LDLDPFRRAFERLRELVLALRADGIALERVDLGGGLGIPYHRDDPASPPPAEYAALARRI 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                V +  EPG  I  N   L + V+   +   +  +I+D+     +   +       
Sbjct: 265 FGDLGVHLVAEPGRLIAGNAGMLVSRVVYRKQGETRTFLILDAGFNDLIRPAMYDAFHDI 324

Query: 281 IYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +               V G  C +GDIF       P+  GD ++F     Y  +  + +N
Sbjct: 325 LPVTAAAENAVLTPVDVVGPICESGDIFARQRPLPPIAAGDLVAFATAGAYGASMSSTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDY 362
           G  +    + + D      R  S  + 
Sbjct: 385 GRPLVPEVMVSGDRFAVVRRRPSVAEM 411


>gi|289550807|ref|YP_003471711.1| Diaminopimelate decarboxylase [Staphylococcus lugdunensis HKU09-01]
 gi|289180339|gb|ADC87584.1| Diaminopimelate decarboxylase [Staphylococcus lugdunensis HKU09-01]
          Length = 421

 Score =  212 bits (540), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 59/394 (14%), Positives = 119/394 (30%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D+ ++ + +       K +G    +  A K F    M   + +        S 
Sbjct: 26  GTPTIVYDEDQIRHQMRRYHSAFKQSGLTYNISYASKAFTCLQMVKLVQEEGLQLDVVSE 85

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  +   ++   K          +     + + + ++      A      
Sbjct: 86  GELYTALSAGFDPKQIHFHGNNKTKREIQYGLENGIGYFVVDALEEIELIDKYASDTVNV 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168
           + LR+NP V           +  S+ G   K             S+   + G+ FH   +
Sbjct: 146 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIKYGLALEAINKIKASKHLYLKGIHFHVGSQ 204

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR----------- 217
            +         K +         Q+E ++LGGG      +       +            
Sbjct: 205 IEGTEAMIETAKIVLNWLSEQQIQVELLNLGGGFGIKYVEGDTSFPIEEGIAEITTAIKD 264

Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLY 275
           + +       +I +EPG +IV         V  I +       V     +  H+   L  
Sbjct: 265 ITKELNYSVPEIGIEPGRSIVGEAGITLYEVGTIKDIPGVNKYVSIDGGMSDHIRTALYD 324

Query: 276 QESATI---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331
            +   +      +   T  + G+ C +GDI          V  GD ++      Y+ +  
Sbjct: 325 AQYEALLVNRHESADETVTISGKLCESGDIIIRNAKLPSSVHRGDILAILSTGAYHYSMS 384

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + +N +  P++         + I+  S      N
Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418


>gi|326692740|ref|ZP_08229745.1| diaminopimelate decarboxylase [Leuconostoc argentinum KCTC 3773]
          Length = 434

 Score =  212 bits (539), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 69/395 (17%), Positives = 123/395 (31%), Gaps = 33/395 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D  K+   +     I +   V   +  A K F+   ++    Q        S 
Sbjct: 26  GTPLYVYDVSKIRQTMRAFKAIFEREDVPYVVSYASKAFSTKAIYQVAQQEGIHADIVSG 85

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F     ++N   K  +    AV +   TII +   +L    + A  Q++ 
Sbjct: 86  GELYTALAAGFPPAHLSFNGNNKSWDELTMAVRAGVGTIIVDNFLELQWLSEIAATQQVQ 145

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
           + I LRI+P +S          +  S+ G            +        N+ GL  H  
Sbjct: 146 QAILLRISPGISAHTHEFISTGQQDSKFGFDLLTGQAKRAYEIARLDANLNLRGLHAHIG 205

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF--------CQRL 218
            +      F      + +    +      I++GGG      D                 L
Sbjct: 206 SQIFDVTGFEKNAALLAETAHSWGWTPAVINVGGGFGIRYTDDDTPLPESDYAAAIIATL 265

Query: 219 KEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDYL 273
           K  +E ++  +   ++EPG +IV        T+    +         VD  +  ++   L
Sbjct: 266 KAKAEAFAWPMPEIWIEPGRSIVGPAGQTLYTIGSRKDIPDLRQYLAVDGGMGDNIRPAL 325

Query: 274 LYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
                  +  N           V G+ C +GD+          K GD +S +    Y   
Sbjct: 326 YQANYDAVLANDPNAPTTEVVRVAGKYCESGDVLVWEQALPQTKPGDILSVQATGAYGYA 385

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             + +N    P +           +   +Y D   
Sbjct: 386 MASNYNRNPRPAVVFVENGAHQVIVARETYADIVA 420


>gi|295424953|ref|ZP_06817665.1| diaminopimelate decarboxylase [Lactobacillus amylolyticus DSM
           11664]
 gi|295065392|gb|EFG56288.1| diaminopimelate decarboxylase [Lactobacillus amylolyticus DSM
           11664]
          Length = 437

 Score =  212 bits (539), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 63/399 (15%), Positives = 125/399 (31%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D  ++   +     + +       +  A K FA   M+    +    T   S 
Sbjct: 31  GTPLIVYDVGQIRQQIRKFKQVFEEEKTSYAVSYASKAFATIAMYQVAAEEGAYTDVVSA 90

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E  +++   K      +   ++   II +   ++   K+  Q+    
Sbjct: 91  GELYTALKASFPMERVSFHGNNKSRAELEMAVKNHVGKIIIDNFYEIKLLKEVLQENDSH 150

Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
           I   LR+ P +S          +  S+ G            ++ +     ++ G+  H  
Sbjct: 151 IKVMLRLTPGISAHTHEYDQTGQIDSKFGFDLNSGQAAKALQEVLAEPRMDMVGIHAHIG 210

Query: 167 CENKSFLCFSAMLKNIEK----EFGHFITQIEWISLGGGIHFTDKDYPVK--------DF 214
            +      F    + + +        +    + I++GGG                     
Sbjct: 211 SQIFELNGFEMAAQKLMQVASSWREKYGYTAKIINVGGGFGIKYVSSDHPLKPEAFVKAI 270

Query: 215 CQRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
            + +K+ + K       I +EPG +IV         V    +    K  V VD  +  ++
Sbjct: 271 VETIKQEAAKNDYPLPEIDIEPGRSIVGPAGYNLYQVGSRKDVPGLKPYVTVDGGMGDNI 330

Query: 270 PDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   E  T+  N           + G+ C +GD+     F    K GD ++  D   
Sbjct: 331 RPALYQAEYETVLANNLKAREEEHVRIAGKYCESGDLLSADAFLPKTKPGDILAMLDTGA 390

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  + +N    P +           ++  S  D   
Sbjct: 391 YGYSMASNYNRNPRPAVVFAENGHAQVVVKRESLEDLVR 429


>gi|168214784|ref|ZP_02640409.1| diaminopimelate decarboxylase [Clostridium perfringens CPE str.
           F4969]
 gi|182625725|ref|ZP_02953493.1| diaminopimelate decarboxylase [Clostridium perfringens D str.
           JGS1721]
 gi|170713766|gb|EDT25948.1| diaminopimelate decarboxylase [Clostridium perfringens CPE str.
           F4969]
 gi|177908987|gb|EDT71469.1| diaminopimelate decarboxylase [Clostridium perfringens D str.
           JGS1721]
          Length = 431

 Score =  212 bits (539), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 71/400 (17%), Positives = 125/400 (31%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ID++ + +N        K    G ++  A K F    M + +N+        S 
Sbjct: 29  GTPLYVIDEELVRSNCRRYYNAMKCEERGNRVTYAGKAFINMSMCNLVNEENLYLDVVSG 88

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+       F  E   ++   K        V       I + + +L      AQ+    
Sbjct: 89  GELYTAYKAGFPLERIYFHGNNKSDYEIDLGVRLGIGRFIVDNIHELEVLNSIAQEYGRV 148

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           +K+ LRI P V           +  S+ G         +  K  +E E   +NGL  H  
Sbjct: 149 QKVYLRITPGVEAHTHEYIKTGQLDSKFGFPVIGDTVYDAIKRAMELEYIELNGLHCHIG 208

Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK---------- 212
            +      F    + +             +I+ + LGGG      +              
Sbjct: 209 SQIFDLEPFEDTTEIMLNLINDIKETLGYEIKELDLGGGFGIYYTEGDKPKEIEEYCSVI 268

Query: 213 -DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            +    +          + +EPG +IV N      TV  I E       V     +  ++
Sbjct: 269 INKADEICRKLNMNVPILSIEPGRSIVGNAGLTLYTVGAIKEIPNIRKYVSVDGGMSDNI 328

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L         A    +       V G+ C +GD+         ++ GD ++      
Sbjct: 329 RPALYSANYESLIANRVFDNSKEIVTVAGKCCESGDVLLNSIEMPRMETGDILAIMSTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I    +   +   +    +  +Y D   N
Sbjct: 389 YGHSMANNYNRIPKAAVVSVSNGISKVMCKRETYEDLLRN 428


>gi|239637088|ref|ZP_04678082.1| diaminopimelate decarboxylase [Staphylococcus warneri L37603]
 gi|239597438|gb|EEQ79941.1| diaminopimelate decarboxylase [Staphylococcus warneri L37603]
          Length = 421

 Score =  212 bits (539), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 63/394 (15%), Positives = 136/394 (34%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D++++ N +       + +G+K  +  A K F    M   + +        S 
Sbjct: 26  GTPTIVYDEEQIRNQMRRYHKAFQQSGLKYNISYASKAFTCIQMVKLVQEEDLQLDVVSE 85

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    E  F      ++   K       A+ ++    + +++ +++     A +  + 
Sbjct: 86  GELYTALEAGFDPSRIHFHGNNKTKHEIKYALENHIGYFVIDSLEEIDLIDRYASETVQV 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
           + LR+NP V           +  S+ G         E      ++   ++ G+  H   +
Sbjct: 146 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIRYGLANEAIDKIKQTNHLHLKGVHIHIGSQ 204

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ--------RLKE 220
            +    F    K +          ++ ++LGGG      +  V    +         +K 
Sbjct: 205 IEGTEAFIETAKIVMNWLNDQQIHVDLLNLGGGFGIKYVEGDVSFPIESSIAEITDAIKN 264

Query: 221 FSEKYSVQIY---LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274
            +++ +++     +EPG +IV         V  I E  +    V     +  H+   L  
Sbjct: 265 EAQQLNMETPEIGIEPGRSIVGEAGITLYEVGTIKEIPEINKYVSIDGGMSDHIRTALYD 324

Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331
             YQ            T  + G+ C +GDI  +       V+ GD ++      Y+ +  
Sbjct: 325 AKYQALLVNRQEEADDTVTIAGKLCESGDIIIKNAKLPSSVQRGDYLAILSTGAYHYSMA 384

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + +N +  P++         + I+  S      N
Sbjct: 385 SNYNQMQKPSVFFIKDGKAREVIKRQSLRQLIIN 418


>gi|151221523|ref|YP_001332345.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|150374323|dbj|BAF67583.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           str. Newman]
          Length = 421

 Score =  212 bits (539), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 63/394 (15%), Positives = 124/394 (31%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D+ ++   +       K++G+K  +  A K F    M   + +        S 
Sbjct: 26  GTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTCIQMVKLVAEEDLQLDVVSE 85

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    E  F      ++   K          +N    + +++ ++      A    + 
Sbjct: 86  GELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVIDSLEEIELIDRYANDTVQV 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + LR+NP V           +  S+ G                +S+   + G+  H   +
Sbjct: 146 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAKKAIDKVQQSKHLKLKGVHCHIGSQ 204

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
            +    F    K + +       Q+E ++LGGG      +       +   +        
Sbjct: 205 IEGTEAFIETAKIVLRWLKEQGIQVELLNLGGGFGIKYVEGDESFPIESGIKDITDAIKS 264

Query: 229 IY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274
                        +EPG +IV         V  I E  +    V     +  H+   L  
Sbjct: 265 EIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKEIPEINKYVSIDGGMSDHIRTALYD 324

Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331
             YQ            +  + G+ C +GDI  +       VK GD ++      Y+ +  
Sbjct: 325 AKYQALLVNRNEEADDSVTIAGKLCESGDIIIKDAKLPSSVKRGDYLAILSTGAYHYSMA 384

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + +N +  P++         + I+  S      N
Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418


>gi|20302394|emb|CAB82467.2| diaminopimelate decarboxylase [Staphylococcus aureus]
          Length = 398

 Score =  212 bits (539), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 63/394 (15%), Positives = 124/394 (31%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D+ ++   +       K++G+K  +  A K F    M   + +        S 
Sbjct: 3   GTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTCIQMVKLVAEEDLQLDVVSE 62

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    E  F      ++   K          +N    + +++ ++      A    + 
Sbjct: 63  GELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVIDSLEEIELIDRYANDTVQV 122

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + LR+NP V           +  S+ G                +S+   + G+  H   +
Sbjct: 123 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAKKAIDKVQQSKHLKLKGVHCHIGSQ 181

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
            +    F    K + +       Q+E ++LGGG      +       +   +        
Sbjct: 182 IEGTEAFIETAKIVLRWLKEQGIQVELLNLGGGFGIKYVEGDESFPIESGIKDITDAIKS 241

Query: 229 IY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274
                        +EPG +IV         V  I E  +    V     +  H+   L  
Sbjct: 242 EIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKEIPEINKYVSIDGGMSDHIRTALYD 301

Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331
             YQ            +  + G+ C +GDI  +       VK GD ++      Y+ +  
Sbjct: 302 AKYQALLVNRNEEADDSVTIAGKLCESGDIIIKDAKLPSSVKRGDYLAILSTGAYHYSMA 361

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + +N +  P++         + I+  S      N
Sbjct: 362 SNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 395


>gi|15924390|ref|NP_371924.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15926980|ref|NP_374513.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           N315]
 gi|21283017|ref|NP_646105.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49486241|ref|YP_043462.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57651900|ref|YP_186287.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           COL]
 gi|87160810|ref|YP_493990.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88195127|ref|YP_499928.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|148267888|ref|YP_001246831.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           JH9]
 gi|150393951|ref|YP_001316626.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           JH1]
 gi|156979719|ref|YP_001441978.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|161509566|ref|YP_001575225.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221140627|ref|ZP_03565120.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           str. JKD6009]
 gi|253315275|ref|ZP_04838488.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           str. CF-Marseille]
 gi|253732037|ref|ZP_04866202.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253733353|ref|ZP_04867518.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|255006189|ref|ZP_05144790.2| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257795545|ref|ZP_05644524.1| diaminopimelate decarboxylase [Staphylococcus aureus A9781]
 gi|258413353|ref|ZP_05681629.1| diaminopimelate decarboxylase [Staphylococcus aureus A9763]
 gi|258420540|ref|ZP_05683482.1| diaminopimelate decarboxylase [Staphylococcus aureus A9719]
 gi|258434688|ref|ZP_05688762.1| diaminopimelate decarboxylase [Staphylococcus aureus A9299]
 gi|258444736|ref|ZP_05693065.1| diaminopimelate decarboxylase [Staphylococcus aureus A8115]
 gi|258447429|ref|ZP_05695573.1| diaminopimelate decarboxylase [Staphylococcus aureus A6300]
 gi|258449270|ref|ZP_05697373.1| diaminopimelate decarboxylase [Staphylococcus aureus A6224]
 gi|258452193|ref|ZP_05700208.1| diaminopimelate decarboxylase [Staphylococcus aureus A5948]
 gi|258454650|ref|ZP_05702614.1| diaminopimelate decarboxylase [Staphylococcus aureus A5937]
 gi|262050355|ref|ZP_06023198.1| diaminopimelate decarboxylase [Staphylococcus aureus D30]
 gi|262053092|ref|ZP_06025263.1| diaminopimelate decarboxylase [Staphylococcus aureus 930918-3]
 gi|282892893|ref|ZP_06301128.1| diaminopimelate decarboxylase [Staphylococcus aureus A8117]
 gi|282927787|ref|ZP_06335400.1| diaminopimelate decarboxylase [Staphylococcus aureus A9765]
 gi|284024400|ref|ZP_06378798.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           132]
 gi|294850735|ref|ZP_06791454.1| diaminopimelate decarboxylase [Staphylococcus aureus A9754]
 gi|295406347|ref|ZP_06816154.1| diaminopimelate decarboxylase [Staphylococcus aureus A8819]
 gi|296275260|ref|ZP_06857767.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           MR1]
 gi|297244576|ref|ZP_06928459.1| diaminopimelate decarboxylase [Staphylococcus aureus A8796]
 gi|300912029|ref|ZP_07129472.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|304381023|ref|ZP_07363678.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           ATCC BAA-39]
 gi|11991217|gb|AAG42251.1|AF306669_8 diaminopimelate decarboxylase [Staphylococcus aureus]
 gi|13701197|dbj|BAB42492.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           N315]
 gi|14247171|dbj|BAB57562.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|21204456|dbj|BAB95153.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49244684|emb|CAG43117.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57286086|gb|AAW38180.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           COL]
 gi|87126784|gb|ABD21298.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87202685|gb|ABD30495.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|147740957|gb|ABQ49255.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           JH9]
 gi|149946403|gb|ABR52339.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           JH1]
 gi|156721854|dbj|BAF78271.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|160368375|gb|ABX29346.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253724228|gb|EES92957.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253728621|gb|EES97350.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257789517|gb|EEV27857.1| diaminopimelate decarboxylase [Staphylococcus aureus A9781]
 gi|257839917|gb|EEV64385.1| diaminopimelate decarboxylase [Staphylococcus aureus A9763]
 gi|257843488|gb|EEV67895.1| diaminopimelate decarboxylase [Staphylococcus aureus A9719]
 gi|257849049|gb|EEV73031.1| diaminopimelate decarboxylase [Staphylococcus aureus A9299]
 gi|257850229|gb|EEV74182.1| diaminopimelate decarboxylase [Staphylococcus aureus A8115]
 gi|257853620|gb|EEV76579.1| diaminopimelate decarboxylase [Staphylococcus aureus A6300]
 gi|257857258|gb|EEV80156.1| diaminopimelate decarboxylase [Staphylococcus aureus A6224]
 gi|257860130|gb|EEV82963.1| diaminopimelate decarboxylase [Staphylococcus aureus A5948]
 gi|257863033|gb|EEV85797.1| diaminopimelate decarboxylase [Staphylococcus aureus A5937]
 gi|259159015|gb|EEW44088.1| diaminopimelate decarboxylase [Staphylococcus aureus 930918-3]
 gi|259161554|gb|EEW46153.1| diaminopimelate decarboxylase [Staphylococcus aureus D30]
 gi|269940895|emb|CBI49278.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           TW20]
 gi|282592041|gb|EFB97069.1| diaminopimelate decarboxylase [Staphylococcus aureus A9765]
 gi|282764890|gb|EFC05015.1| diaminopimelate decarboxylase [Staphylococcus aureus A8117]
 gi|285817078|gb|ADC37565.1| Diaminopimelate decarboxylase [Staphylococcus aureus 04-02981]
 gi|294822411|gb|EFG38861.1| diaminopimelate decarboxylase [Staphylococcus aureus A9754]
 gi|294968935|gb|EFG44957.1| diaminopimelate decarboxylase [Staphylococcus aureus A8819]
 gi|297178606|gb|EFH37852.1| diaminopimelate decarboxylase [Staphylococcus aureus A8796]
 gi|300886275|gb|EFK81477.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|302751229|gb|ADL65406.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           str. JKD6008]
 gi|304340439|gb|EFM06378.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           ATCC BAA-39]
 gi|312829795|emb|CBX34637.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|315131208|gb|EFT87192.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|315195912|gb|EFU26277.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320140792|gb|EFW32641.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320142184|gb|EFW34002.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329314076|gb|AEB88489.1| Diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329725312|gb|EGG61796.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           21189]
 gi|329727699|gb|EGG64155.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           21172]
          Length = 421

 Score =  212 bits (539), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 63/394 (15%), Positives = 124/394 (31%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D+ ++   +       K++G+K  +  A K F    M   + +        S 
Sbjct: 26  GTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTCIQMVKLVAEEDLQLDVVSE 85

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    E  F      ++   K          +N    + +++ ++      A    + 
Sbjct: 86  GELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVIDSLEEIELIDRYANDTVQV 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + LR+NP V           +  S+ G                +S+   + G+  H   +
Sbjct: 146 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAKKAIDKVQQSKHLKLKGVHCHIGSQ 204

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
            +    F    K + +       Q+E ++LGGG      +       +   +        
Sbjct: 205 IEGTEAFIETAKIVLRWLKEQGIQVELLNLGGGFGIKYVEGDESFPIESGIKDITDAIKS 264

Query: 229 IY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274
                        +EPG +IV         V  I E  +    V     +  H+   L  
Sbjct: 265 EIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKEIPEINKYVSIDGGMSDHIRTALYD 324

Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331
             YQ            +  + G+ C +GDI  +       VK GD ++      Y+ +  
Sbjct: 325 AKYQALLVNRNEEADDSVTIAGKLCESGDIIIKDAKLPSSVKRGDYLAILSTGAYHYSMA 384

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + +N +  P++         + I+  S      N
Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418


>gi|261749392|ref|YP_003257077.1| diaminopimelate decarboxylase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497484|gb|ACX83934.1| diaminopimelate decarboxylase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 409

 Score =  212 bits (539), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 64/386 (16%), Positives = 123/386 (31%), Gaps = 27/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP Y+ D +K+                +++  A K      +   L +   G  + S+ 
Sbjct: 22  GTPLYIYDSRKIERQYIKMKKAFSEVTRLRINYACKANTNLNVLKFLQKLGSGLDTVSIQ 81

Query: 62  EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           EV LG    F  +   +        E+   +     I  + +S L +F +  +     IG
Sbjct: 82  EVELGLRAGFSPKHIIFTPNCVSLQEVKKAVDFGVKINIDNLSLLEQFGN--ENPDYPIG 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGE------KCKDKIESEIKNVNGLMFHNNCENKSFL 173
           +RINP +              S+ G         K  +++    + G   H   +     
Sbjct: 140 IRINPHIMAGGNYKISVGHVDSKFGISYYQIPHLKRILKNTGLKIEGFHMHAGSDISDIE 199

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF--------CQRLKEFSEKY 225
            F      +  +       I++I  G G         +K           ++ + F + Y
Sbjct: 200 AFLQ-GAKVIFQIALDFPDIDYIDFGSGFKVPYTKNDIKTDLTFLSRSIIEKFESFCKVY 258

Query: 226 SVQI--YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             ++    EPG+ +V+ + +    V  I      +     S   H    + Y+    I  
Sbjct: 259 GKKVTLIWEPGKFLVSESGSFLVHVNVIKHTTSTVFAGVDSGFNHFIRPMFYEAYHCIEN 318

Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            + P        V G  C + D FG       ++ GD +  ++   Y  +  + +N    
Sbjct: 319 ISNPNGRSRFYTVVGYICES-DTFGFNRQIAEIREGDILCIKNAGAYCFSMSSNYNSRYR 377

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365
           P+  +          R  +  D   N
Sbjct: 378 PSEVMIVKGQDFLIRRRETMQDLLRN 403


>gi|296268863|ref|YP_003651495.1| diaminopimelate decarboxylase [Thermobispora bispora DSM 43833]
 gi|296091650|gb|ADG87602.1| diaminopimelate decarboxylase [Thermobispora bispora DSM 43833]
          Length = 465

 Score =  212 bits (539), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 53/398 (13%), Positives = 119/398 (29%), Gaps = 38/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D++   +               +  A K F    +   ++Q   G    +  E
Sbjct: 67  GTPLYIVDEEDFRSRCRDYRSAF--PDGDVHYAGKAFLCREVARWIDQEGLGLDVCTGGE 124

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           + +     F  E    +   K       AV +    I+ ++  ++++    A       K
Sbjct: 125 LAVALSVGFPPERITMHGNNKSVAELERAVTAGVGRIVIDSFEEIDRLGQIAARYGRRPK 184

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G         E  +  +      + GL  H   +
Sbjct: 185 VLIRVTVGVEAHTHEFIATAHDDQKFGLSLSSGAAAEAVRRVLARPQLELVGLHSHIGSQ 244

Query: 169 NKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F    + +              +  + LGGG      +       + + +   +
Sbjct: 245 ITDVGGFEVAARRLAGLLVGIRDEHGVVLPELDLGGGYGIPYVEGDEAPDIKVIADGLRE 304

Query: 225 YS-----------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271
            +            ++ +EPG +I          V  + +    +  V VD  +  ++  
Sbjct: 305 ITTTVCRSAGLPVPRLIVEPGRSIAGIAGITLYEVGTVKDVEGLRTYVSVDGGMSDNIRT 364

Query: 272 YLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326
            L       +      +  P  + + G+ C +GD+     +    V  GD I+      Y
Sbjct: 365 ALYGANYTAVVASRESDAAPMLSRLVGKHCESGDMVIRDLWLPSDVVPGDLIAVAGTGAY 424

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N +  P +   +       +R  +  D   
Sbjct: 425 CRSLSSNYNYLPRPAVVAVSKGAARVIVRRETEEDLLR 462


>gi|116493670|ref|YP_805404.1| diaminopimelate decarboxylase [Lactobacillus casei ATCC 334]
 gi|116103820|gb|ABJ68962.1| diaminopimelate decarboxylase [Lactobacillus casei ATCC 334]
          Length = 448

 Score =  212 bits (539), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 62/400 (15%), Positives = 121/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           +TP Y+ D   +   +     + + A V   +  A K FA   M++            S 
Sbjct: 26  QTPLYVYDIGAIRQQIRAFKRVFEEADVSYAVSYASKAFATIAMYEVAKSEGAHVDVVSG 85

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+       F     +++   K       A+ +   TII +   +L+   D        
Sbjct: 86  GELYTAQAADFPMAAVSFHGNNKSKAELTQALDAGVGTIIVDNFHELDLLDDLLGDTVGQ 145

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           + + +R+ P +S          +  S+ G         E  K  +  +  N+ G+  H  
Sbjct: 146 QDVLIRVAPGISAHTHAYDQTGQTDSKFGFDLASGQADEAAKRILADDHLNLLGIHAHIG 205

Query: 167 CENKSFLCFSAMLKNIEK----EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---- 218
            +      F A+ + +          F    + +++GGG              +      
Sbjct: 206 SQIFEVAGFEAVTQKLLHVLNNWHQQFGFIPKVLNVGGGFGIAYTKQDDPLPPEAFVKAI 265

Query: 219 -------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
                   +        I++EPG +IV        TV    +    +  V VD  +  ++
Sbjct: 266 LATLKSQSQTLNWPLPAIWIEPGRSIVGPAGYSLYTVGSRKDVPGLRPYVAVDGGMGDNI 325

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +              + G+ C +GDI  +         GD +   D   
Sbjct: 326 RPALYQATYTAVLADQPNAAPAEHVHLVGKYCESGDILIDDAPLPTTTSGDVVVVFDTGA 385

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  + +N    P +           +   +  D   N
Sbjct: 386 YGYSMASNYNRNPRPAVVFVENGQAQLVVTRETDADLIKN 425


>gi|325968867|ref|YP_004245059.1| diaminopimelate decarboxylase [Vulcanisaeta moutnovskia 768-28]
 gi|323708070|gb|ADY01557.1| diaminopimelate decarboxylase [Vulcanisaeta moutnovskia 768-28]
          Length = 401

 Score =  211 bits (538), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 57/377 (15%), Positives = 109/377 (28%), Gaps = 20/377 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP  + D  ++  N             K+L ++K      +   L +   G  ++S  E
Sbjct: 20  GTPLIVYDLGRVEENYRAIRDSI---NAKILYSIKANPNLAILTLLRKLGSGADAASPGE 76

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           + L     F      Y  AY+  +      N      F++  +  +      +       
Sbjct: 77  IFLATRAGFEPSNILYTGAYRSLDDIKYGINTGVLFNFDSRREFERALALGYRPRTIF-F 135

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSFLC 174
           R++                 S+ G    D I++     +      G+             
Sbjct: 136 RVDLGYGRGFAPGVTLAGEESKFGMFLNDAIDAYSLAKSIGTEEFGIHAMMGSNVLDSDY 195

Query: 175 FSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY 230
           F  + + + +           +I +  +GGG     +         +L      +  +++
Sbjct: 196 FIRIAELLREHAETIEDRVGIRISYFDMGGGFGIPYRPGEKSLDLSKLSVLRNFFPGELW 255

Query: 231 LEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT 289
           +EPG  IV N   L T V ++     +  V VD  +   +   L       I        
Sbjct: 256 VEPGRFIVGNAGYLVTRVTEVKRKGGRTFVGVDVGMNVLIRPMLYGAYHQMITCGNNTEV 315

Query: 290 AMVC---GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
             V    G  C   D          V+ GD +   +   Y  +  + +NG   P   V  
Sbjct: 316 TEVVDVVGPICENTDKLAINRELPRVREGDLLIILNAGAYVYSMSSNYNGRPRPAEIVVY 375

Query: 347 VDGTIKAIREFSYNDYY 363
            +    A      +   
Sbjct: 376 RNEYGIARFREPLDSLV 392


>gi|37519679|ref|NP_923056.1| diaminopimelate decarboxylase [Gloeobacter violaceus PCC 7421]
 gi|35210670|dbj|BAC88051.1| diaminopimelate decarboxylase [Gloeobacter violaceus PCC 7421]
          Length = 444

 Score =  211 bits (538), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 55/395 (13%), Positives = 117/395 (29%), Gaps = 33/395 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP Y++D+  L       +   K       ++L A K ++   +   +++   G  + S
Sbjct: 40  GTPLYILDEATLRAACTQYVEAFKRHYAGDFRVLYASKAWSNLAICAIVHRCGLGIDAVS 99

Query: 60  LYEVMLG-HEKFGGE-THAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             EV         GE  + +     + EI        T++ +    L      + +   +
Sbjct: 100 AGEVHTALRAGVPGELVYLHGNNKSEAEILLAAEVGATVVADNWLDLEILSAISAECPVR 159

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           + +R+ P +              S+ G    +                 GL  H   ++ 
Sbjct: 160 VMVRVAPGIDIHTHEYIRTGHLDSKFGFDPSELAAVLAYLARIPSLRAVGLHAHIGSQSF 219

Query: 171 SFLCFSAMLKNIEKEFGHFIT----QIEWISLGGGIHFTDKDYPVKD--------FCQRL 218
                    + + + +   +         +++GGG+     D              CQ +
Sbjct: 220 ELAPHGDAAQLLLEWYPKALALGLSDFNELNVGGGLGIRYTDDDDPPAIDEWVGTICQAV 279

Query: 219 KEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYL 273
                 Y+    ++  EPG ++V        TV                  +  +     
Sbjct: 280 TRTCNTYNLPLPKLLCEPGRSLVGPACATAYTVGSTKTIPSIRKYFSVDGGMSDNPRPIT 339

Query: 274 LYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
                  +  N           V G+ C +GD+        P++ GD +       YN +
Sbjct: 340 YKALYTAVVANKMHDGRREKVTVAGKHCESGDVLLRDVELPPLERGDCLVVFSTGAYNCS 399

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             + +N I  P   + +       ++  S +D   
Sbjct: 400 MASNYNRIPRPAAVLVSDGEATLIVKRESPDDLLR 434


>gi|110800409|ref|YP_695029.1| diaminopimelate decarboxylase [Clostridium perfringens ATCC 13124]
 gi|168206713|ref|ZP_02632718.1| diaminopimelate decarboxylase [Clostridium perfringens E str.
           JGS1987]
 gi|168211701|ref|ZP_02637326.1| diaminopimelate decarboxylase [Clostridium perfringens B str. ATCC
           3626]
 gi|168217954|ref|ZP_02643579.1| diaminopimelate decarboxylase [Clostridium perfringens NCTC 8239]
 gi|110675056|gb|ABG84043.1| diaminopimelate decarboxylase [Clostridium perfringens ATCC 13124]
 gi|170661848|gb|EDT14531.1| diaminopimelate decarboxylase [Clostridium perfringens E str.
           JGS1987]
 gi|170710345|gb|EDT22527.1| diaminopimelate decarboxylase [Clostridium perfringens B str. ATCC
           3626]
 gi|182379999|gb|EDT77478.1| diaminopimelate decarboxylase [Clostridium perfringens NCTC 8239]
          Length = 431

 Score =  211 bits (538), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 71/400 (17%), Positives = 125/400 (31%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ID++ + +N        K    G ++  A K F    M + +N+        S 
Sbjct: 29  GTPLYVIDEELVRSNCRRYYNAMKCEERGNRVTYAGKAFINMSMCNLVNEENLYLDVVSG 88

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+       F  E   ++   K        V       I + + +L      AQ+    
Sbjct: 89  GELYTAYKAGFPLERIYFHGNNKSDYEIDLGVRLGIGRFIVDNIHELEVLNSIAQEYGRV 148

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           +K+ LRI P V           +  S+ G         +  K  +E E   +NGL  H  
Sbjct: 149 QKVYLRITPGVEAHTHEYIKTGQLDSKFGFPVIGDTVYDAIKRAMELEYIELNGLHCHIG 208

Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK---------- 212
            +      F    + +             +I+ + LGGG      +              
Sbjct: 209 SQIFDLEPFEDTTEIMLNLINDIKETLGYEIKELDLGGGFGIYYTEGDKPKEIEEYCSVI 268

Query: 213 -DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            +    +          + +EPG +IV N      TV  I E       V     +  ++
Sbjct: 269 INKADEICRKLNMNVPILSIEPGRSIVGNAGLTLYTVGAIKEIPNIRKYVSVDGGMSDNI 328

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L         A    +       V G+ C +GD+         ++ GD ++      
Sbjct: 329 RPALYSANYESLIANRVFDNSKEIVTVAGKCCESGDVLLNSIEMPRMETGDILAIMSTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I    +   +   +    +  +Y D   N
Sbjct: 389 YGHSMANNYNRIPKAAVVSVSNGISKVMCKRETYEDLLRN 428


>gi|282929364|ref|ZP_06336929.1| diaminopimelate decarboxylase [Staphylococcus aureus A10102]
 gi|282589064|gb|EFB94166.1| diaminopimelate decarboxylase [Staphylococcus aureus A10102]
          Length = 421

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 62/394 (15%), Positives = 124/394 (31%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D+ ++   +       K++G+K  +  A K F    M   + +        S 
Sbjct: 26  GTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTCIQMVKLVAEEDLQLDVVSE 85

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    E  F      ++   K          +N    + +++ ++      A    + 
Sbjct: 86  GELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVIDSLEEIELIDRYANDTVQV 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + LR+NP V           +  S+ G                +S+   + G+  H   +
Sbjct: 146 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAKKAIDKVQQSKHLKLKGVHCHIGSQ 204

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
            +    F    K + +       Q++ ++LGGG      +       +   +        
Sbjct: 205 IEGTEAFIETAKIVLRWLKEQGIQVDLLNLGGGFGIKYVEGDESFPIESGIKDITDAIKS 264

Query: 229 IY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274
                        +EPG +IV         V  I E  +    V     +  H+   L  
Sbjct: 265 EIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKEIPEINKYVSIDGGMSDHIRTALYD 324

Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331
             YQ            +  + G+ C +GDI  +       VK GD ++      Y+ +  
Sbjct: 325 AKYQALLVNRNEEADDSVTIAGKLCESGDIIIKDAKLPSSVKRGDYLAILSTGAYHYSMA 384

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + +N +  P++         + I+  S      N
Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418


>gi|297207945|ref|ZP_06924377.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|296887413|gb|EFH26314.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           ATCC 51811]
          Length = 421

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 63/394 (15%), Positives = 125/394 (31%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D+ ++   +       K++G+K  +  A K F    M   + +        S 
Sbjct: 26  GTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTCIQMVKLVAEEDLQLDVVSE 85

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    E  F      ++   K          +N    + +++ ++      A    + 
Sbjct: 86  GELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVIDSLEEIELIDRYANDTVQV 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + LR+NP V     +     +  S+ G                +S+   + G+  H   +
Sbjct: 146 V-LRVNPGVEAHTHVFIQTGQEDSKFGLSIQYGLAKKAIDKVQQSKHLKLKGVHCHIGSQ 204

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
            +    F    K + +       Q+E ++LGGG      +       +   +        
Sbjct: 205 IEGTEAFIETAKIVLRWLKEQGIQVELLNLGGGFGIKYVEGDESFPIESGIKDITDAIKS 264

Query: 229 IY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274
                        +EPG +IV         V  I E  +    V     +  H+   L  
Sbjct: 265 EIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKEIPEINKYVSIDGGMSDHIRTALYD 324

Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331
             YQ            +  + G+ C +GDI  +       VK GD ++      Y+ +  
Sbjct: 325 AKYQALLVNRNEEADDSVTIAGKLCESGDIIIKDAKLPSSVKRGDYLAILSTGAYHYSMA 384

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + +N +  P++         + I+  S      N
Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418


>gi|323441184|gb|EGA98891.1| diaminopimelate decarboxylase [Staphylococcus aureus O11]
 gi|323444053|gb|EGB01664.1| diaminopimelate decarboxylase [Staphylococcus aureus O46]
          Length = 421

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 63/394 (15%), Positives = 125/394 (31%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D+ ++   +       K++G+K  +  A K F    M   + +        S 
Sbjct: 26  GTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTCIQMVKLVAEEDLQLDVVSE 85

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    E  F      ++   K          +N    + +++ ++   +  A    + 
Sbjct: 86  GELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVIDSLEEIELIERYANDTVQV 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + LR+NP V           +  S+ G                +S+   + G+  H   +
Sbjct: 146 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAKKAIDKVQQSKHLKLKGVHCHIGSQ 204

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
            +    F    K + +       Q+E ++LGGG      +       +   +        
Sbjct: 205 IEGTEAFIETAKIVLRWLKEQGIQVELLNLGGGFGIKYVEGDESFPIESGIKDITDAIKS 264

Query: 229 IY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274
                        +EPG +IV         V  I E  +    V     +  H+   L  
Sbjct: 265 EIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKEIPEINKYVSIDGGMSDHIRTALYD 324

Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331
             YQ            +  + G+ C +GDI  +       VK GD ++      Y+ +  
Sbjct: 325 AKYQALLVNRNEKADDSVTIAGKLCESGDIIIKDAKLPSSVKRGDYLAILSTGAYHYSMA 384

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + +N +  P++         + I+  S      N
Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418


>gi|48477088|ref|YP_022794.1| diaminopimelate decarboxylase [Picrophilus torridus DSM 9790]
 gi|48429736|gb|AAT42601.1| diaminopimelate decarboxylase [Picrophilus torridus DSM 9790]
          Length = 419

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 61/388 (15%), Positives = 122/388 (31%), Gaps = 28/388 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  ++ ++++ NN               K+  ALK  +   +   L +   G  +++ 
Sbjct: 27  GTPLIVLSEKRINNNYLKIKSAFSKHFRHFKVHYALKANSNPAVISILRRLGAGADAANP 86

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E  +        +                 L     I F+ V+Q+N  K+   +L   I
Sbjct: 87  NEAEIAMYSGISPDNIIMTGNNLSYNDLKRALEMNIKINFDDVNQMNILKN---ELPDII 143

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSF 172
             RINP     +F       P S+ G    + +      +N      G+       N   
Sbjct: 144 SFRINPGYGNGEFTGIKTAGPSSKFGIPVNEALNGYRTALNAGVKKFGIHMMAGSNNLDP 203

Query: 173 LCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEKY 225
             F  +                   ++I +GGG     K+     + +  + +    +  
Sbjct: 204 GYFYELSGIFAGIIKTINNELGISFDFIDIGGGFGVPYKNEAALDINETARLIAMALDGI 263

Query: 226 SV-----QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280
                  +I +EPG  +V +      TV D+    +++   D  +   +   L       
Sbjct: 264 MDSNPDAEIIIEPGRYLVADAGIALATVTDLKNYGRSIAGTDLGMNILIRPALYGAVHEI 323

Query: 281 IYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
           I  N      +   + G+ C   D  G       ++ GD +   +   Y  +  + +N +
Sbjct: 324 ICINKNDDKLFNYDITGQICENTDFTGLNVKLPGLEPGDILGIMNAGAYVSSMSSNYNSL 383

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           +     + + D      +     D  NN
Sbjct: 384 SRAAEVLISDDNVHLIKKRDDIRDIINN 411


>gi|301311439|ref|ZP_07217366.1| diaminopimelate decarboxylase [Bacteroides sp. 20_3]
 gi|300830525|gb|EFK61168.1| diaminopimelate decarboxylase [Bacteroides sp. 20_3]
          Length = 386

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 71/370 (19%), Positives = 120/370 (32%), Gaps = 25/370 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y  D + L + LD         G  +  A+K  A   +   +     G    S  
Sbjct: 14  LSTPFYYYDVKLLQDTLDVVKTESGKYGYHVHYAVKANANPRILSIIAANGLGADCVSGG 73

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHK-- 116
           EV       F  +   +    K      +  + D   FN  +  +L    + A   +K  
Sbjct: 74  EVQAALDAGFPADKIVFAGVGKADWEINLGLDNDIFCFNVESAVELEIINELAATKNKVA 133

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCEN 169
            I LRINP V              ++ G              E +   + G+  H   + 
Sbjct: 134 SIALRINPEVDAHTHAKITTGMKENKFGINLSQLGGVLDKLKEMKNVKLIGIHSHIGSQI 193

Query: 170 KS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226
                F         I++E       +E ++ GGG+                  F+  + 
Sbjct: 194 TDMSSFRNLVIRFNEIQEELEAHGVTVENLNFGGGLGIDYYHPNHLSIPAFDNYFAAIHK 253

Query: 227 -------VQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL--YQ 276
                   Q++ EPG +IV    TL + VL + E   K   I+D+     +   +   Y 
Sbjct: 254 LLQVRPGQQVHFEPGRSIVAQCGTLISKVLYVKEGETKKFAILDAGFTELIRPAMYDAYH 313

Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
               I  +    T  V G  C + D+FG+         GD I+      Y     + +N 
Sbjct: 314 RIENISSDEAVETYDVVGPICESSDVFGKDVELNKAHRGDLIALRSAGAYGEVMASQYNC 373

Query: 337 INMPTIAVKN 346
            ++P     +
Sbjct: 374 RHLPKAYYSD 383


>gi|229069071|ref|ZP_04202363.1| Diaminopimelate decarboxylase [Bacillus cereus F65185]
 gi|228714016|gb|EEL65899.1| Diaminopimelate decarboxylase [Bacillus cereus F65185]
          Length = 438

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 59/400 (14%), Positives = 121/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D++ +           K +G   ++  A K F    M     +        S 
Sbjct: 30  GTPLYVYDEESIRGKCRAFHRAFKESGFSYQVAYASKAFLCMEMCRVAREENMSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+       F      ++   K  E    A+ +N    + +   +L    D A +    
Sbjct: 90  GELYTALQAGFPASRIHFHGNNKTEEEIVMALQANIGCFVVDNFFELEVLHDLAMQHGKF 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
             I +R+ P V           +  S+ G    +          ++    NV G+  H  
Sbjct: 150 VNILIRVTPGVEAHTHEYITTGQDDSKFGFGVSNGQAMQAIRFALQKSNYNVLGIHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F   ++ + +            ++ +++GGG      +              
Sbjct: 210 SQIFETAGFVRAIEVLRQFLVEVREQTNYVVKVLNVGGGFGIRYTESDTPLTLETYVRAV 269

Query: 215 ---CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               +      E    +I++EPG +IV +  T   TV  + +       V     +  ++
Sbjct: 270 TSAVREQFTVCEYPLPEIWVEPGRSIVGDAGTTIYTVGSVKDIPGIRKYVSVDGGMTDNL 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +      +       + G+ C +GD+         V   D ++      
Sbjct: 330 RPALYSARYEAMLANRGNDENEELVSIAGKCCESGDMLIWDIHLPKVIASDLLAVSCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I  P +       +   +   +Y +   N
Sbjct: 390 YGYSMANNYNRIRRPAVVFAKGGTSQVVVERETYENIIGN 429


>gi|330836743|ref|YP_004411384.1| diaminopimelate decarboxylase [Spirochaeta coccoides DSM 17374]
 gi|329748646|gb|AEC02002.1| diaminopimelate decarboxylase [Spirochaeta coccoides DSM 17374]
          Length = 422

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 65/394 (16%), Positives = 117/394 (29%), Gaps = 29/394 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           + TP+YL D++ L +       +     G +   A+K      +   L  +  G   SSL
Sbjct: 20  LPTPFYLYDEKGLRDTARYFSEMFSWAPGFRNYYAVKACPNPVILKMLAGHGFGADCSSL 79

Query: 61  YEVMLGHE-KFGGETHAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E+ L       GE   +      D E          I  + ++ ++           ++
Sbjct: 80  PELRLSRAAGLSGEKLMFTSNDTADDEFREAYEMGAVINLDDITHIDALLRATDGKVPEL 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE--IKNVNGLMFHNNC--------E 168
                   +         N   ++ G      + +   +K +    F  +          
Sbjct: 140 ISFRYNPGAERTGNAIIGNPVEAKYGVTTDQIVGAYVRMKELGSKRFALHTMVASNELDG 199

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
           +        +     +       +IE+I +GGGI    K          +    E    +
Sbjct: 200 SYIVETARMLFALCIRLKKEADVRIEFIDMGGGIGIPYKPDQKPMDLGMVSREMEALYNE 259

Query: 229 IYL-----------EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
           + +           E G  I      L + V  ++   K+ V +D+ +   +   L    
Sbjct: 260 MIIPAGLAPLGIVFECGRCITGPHGYLVSRVRHVAHKYKDYVGLDACMADLMRPALYGAY 319

Query: 278 SATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                             V G  C   D F       PVK GD +   D   +       
Sbjct: 320 HHITVLGKEGVPADNVYDVTGSLCENNDKFAIDRRLPPVKPGDVVVIHDAGAHGHAMGFN 379

Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           +N    P   +   DGT+  IR   +Y+DY   L
Sbjct: 380 YNAKLRPAEYLLKADGTVVMIRRAQTYDDYVATL 413


>gi|283470614|emb|CAQ49825.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           ST398]
          Length = 421

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 63/394 (15%), Positives = 125/394 (31%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D+ ++   +       K++G+K  +  A K F    M   + +        S 
Sbjct: 26  GTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTCLQMVKLVAEEDLQLDVVSE 85

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    E  F      ++   K          +N    + +++ ++      A    + 
Sbjct: 86  GELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVIDSLEEIELIDRYANDTVQV 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168
           + LR+NP V           +  S+ G   +            +S+   + G+  H   +
Sbjct: 146 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAIKAINKVQQSKHLKLKGVHCHIGSQ 204

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
            +    F    K + +       Q+E ++LGGG      +       +   +        
Sbjct: 205 IEGTEAFIETAKIVLRWLKEQGIQVELLNLGGGFGIKYVEGDESFPIESGIKDITDAIKS 264

Query: 229 IY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274
                        +EPG +IV         V  I E  +    V     +  H+   L  
Sbjct: 265 EIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKEIPEINKYVSIDGGMSDHIRTALYD 324

Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331
             YQ            +  + G+ C +GDI  +       VK GD ++      Y+ +  
Sbjct: 325 AKYQALLVNRNEEADDSVTIAGKLCESGDIIIKDAKLPSSVKRGDYLAILSTGAYHYSMA 384

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + +N +  P++         + I+  S      N
Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418


>gi|262383506|ref|ZP_06076642.1| diaminopimelate decarboxylase [Bacteroides sp. 2_1_33B]
 gi|262294404|gb|EEY82336.1| diaminopimelate decarboxylase [Bacteroides sp. 2_1_33B]
          Length = 386

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 71/370 (19%), Positives = 120/370 (32%), Gaps = 25/370 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y  D + L + LD         G  +  A+K  A   +   +     G    S  
Sbjct: 14  LSTPFYYYDVKLLQDTLDVVKTESGKYGYHVHYAVKANANPRILSIIAANGLGADCVSGG 73

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHK-- 116
           EV       F  +   +    K      +  + D   FN  +  +L    + A   +K  
Sbjct: 74  EVQAALDAGFPADKIVFAGVGKADWEINLGLDNDIFCFNVESAVELEIINELAVAKNKVA 133

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCEN 169
            I LRINP V              ++ G              E +   + G+  H   + 
Sbjct: 134 SIALRINPEVDAHTHAKITTGMKENKFGINLSQLGGVLDKLKEMKNVKLIGIHSHIGSQI 193

Query: 170 KS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226
                F         I++E       +E ++ GGG+                  F+  + 
Sbjct: 194 TDMSSFRNLVIRFNEIQEELEAHGVTVENLNFGGGLGIDYYHPNHLSIPAFDNYFAAIHK 253

Query: 227 -------VQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL--YQ 276
                   Q++ EPG +IV    TL + VL + E   K   I+D+     +   +   Y 
Sbjct: 254 LLQVRPGQQVHFEPGRSIVAQCGTLISKVLYVKEGETKKFAILDAGFTELIRPAMYDAYH 313

Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
               I  +    T  V G  C + D+FG+         GD I+      Y     + +N 
Sbjct: 314 RIENISSDEAVETYDVVGPICESSDVFGKDVELNKAHRGDLIALRSAGAYGEVMASQYNC 373

Query: 337 INMPTIAVKN 346
            ++P     +
Sbjct: 374 RHLPKAYYSD 383


>gi|134102735|ref|YP_001108396.1| diaminopimelate decarboxylase [Saccharopolyspora erythraea NRRL
           2338]
 gi|291007808|ref|ZP_06565781.1| diaminopimelate decarboxylase [Saccharopolyspora erythraea NRRL
           2338]
 gi|133915358|emb|CAM05471.1| diaminopimelate decarboxylase [Saccharopolyspora erythraea NRRL
           2338]
          Length = 472

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 51/406 (12%), Positives = 120/406 (29%), Gaps = 45/406 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +++D+    +          +    +  A K F    +   + +        S  E
Sbjct: 65  GTPLFVLDEDDFRSRCADYAGAFGDP-ASVHYASKAFLCTEVARWVAEEGLSLDVCSGGE 123

Query: 63  VMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117
           + +    +F  E    +   K       AV +   +++ ++  ++ + +  A++  + + 
Sbjct: 124 LNVALRAEFPPERITLHGNNKSVPELTAAVEAGVGSVVLDSFHEIARLEHIARERGVRQD 183

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G         E     +++E   + GL  H   +
Sbjct: 184 VMIRVTVGVEAHTHEFIATAHEDQKFGFSLTSGQAAEAVGRVLKAESLRLVGLHSHIGSQ 243

Query: 169 NKSFLCFSAMLKNIEKEFGHF--------ITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F      + +             ++ +  + LGGG+               L  
Sbjct: 244 IFDDDGFELAAHRVIRLLAKMQEEHGAEALSTVSTVDLGGGLGIAYTAEDDPLPPAELAA 303

Query: 221 FSEKYSVQIY-----------LEPGEAIVTNTTTLNTTVLDISEN------IKNLVIVDS 263
              +   +             +EPG AI    T     V  I +        +  V VD 
Sbjct: 304 RLNEIVRKECENAGLAAPRIAVEPGRAIAGPGTVTVYEVGTIKDVALDGGLQRRYVSVDG 363

Query: 264 SVEAHVPDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318
            +  ++   L          +         + + G+ C +GD+     +    +  GD +
Sbjct: 364 GMSDNIRTSLYDAVYDCRLVSRRAEARAVLSRIVGKHCESGDVVVRDCWLPEDIAPGDLV 423

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +      Y     + +N +  P +           +R  + +D   
Sbjct: 424 AVAATGAYCYVMASNYNRLPKPAVVAVRDGQARLLLRRETEDDLLR 469


>gi|256841336|ref|ZP_05546843.1| diaminopimelate decarboxylase [Parabacteroides sp. D13]
 gi|256737179|gb|EEU50506.1| diaminopimelate decarboxylase [Parabacteroides sp. D13]
          Length = 386

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 70/370 (18%), Positives = 119/370 (32%), Gaps = 25/370 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y  D + L + LD         G  +  A+K  A   +   +     G    S  
Sbjct: 14  LSTPFYYYDVKLLQDTLDVVKTESGKYGYHVHYAVKANANPRILSIIAANGLGADCVSGG 73

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLHK 116
           EV       F  +   +    K      +  + D   FN  +  +L    + A  +    
Sbjct: 74  EVQAALDAGFPADKIVFAGVGKADWEINLGLDNDIFCFNVESAVELEIINELAAAKNKVA 133

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCEN 169
            I LRINP V              ++ G              E +   + G+  H   + 
Sbjct: 134 SIALRINPEVDAHTHAKITTGMKENKFGINLSQLGGVLDKLKEMKNVKLIGIHSHIGSQI 193

Query: 170 KS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226
                F         I++E       +E ++ GGG+                  F+  + 
Sbjct: 194 TDMSSFRNLVIRFNEIQEELEAHGVTVENLNFGGGLGIDYYHPNHLSIPAFDNYFAAIHK 253

Query: 227 -------VQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL--YQ 276
                   Q++ EPG +IV    TL + VL + E   K   I+D+     +   +   Y 
Sbjct: 254 LLQVRPGQQVHFEPGRSIVAQCGTLISKVLYVKEGETKKFAILDAGFTELIRPAMYDAYH 313

Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
               I  +    T  V G  C + D+FG+         GD I+      Y     + +N 
Sbjct: 314 RIENISSDEAVETYDVVGPICESSDVFGKDVELNKAHRGDLIALRSAGAYGEVMASQYNC 373

Query: 337 INMPTIAVKN 346
            ++P     +
Sbjct: 374 RHLPKAYYSD 383


>gi|237785874|ref|YP_002906579.1| Diaminopimelate decarboxylase [Corynebacterium kroppenstedtii DSM
           44385]
 gi|237758786|gb|ACR18036.1| Diaminopimelate decarboxylase [Corynebacterium kroppenstedtii DSM
           44385]
          Length = 481

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 64/416 (15%), Positives = 132/416 (31%), Gaps = 55/416 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP  ++D+                 G  +  A K F   G+   +         +S  E
Sbjct: 62  GTPLMVVDEDDFRARCRAMADAFDGPGH-VHYASKAFLTVGIARWVASEGLCLDVASDGE 120

Query: 63  VMLG-HEKFGGETH-AYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F  E    +     D     AV +    I+ ++  ++++    A+     ++
Sbjct: 121 LDVALRAGFPPERITVHGNNKLDSTLTKAVQAGVGHIVIDSRQEVDRLGKIARDAGVRQE 180

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEK-----CKDKIESEIK----NVNGLMFHNNCE 168
           + +R+ P V          +    + G        KD + + +      V GL  H   +
Sbjct: 181 VLIRVTPGVHADTHEFIATSHEDQKFGLSLACGAAKDAVLAAMDYDSLAVAGLHCHVGSQ 240

Query: 169 -------NKSFLCFSAMLKNIEKEFGHFITQ-----------IEWISLGGGIHFTDK--- 207
                  + +      ++ ++  + G + +            ++ + LGGG         
Sbjct: 241 VFDADGFSLAAERLLGLMADLHHQLGRYGSDGGVEKKDVKDSLDILDLGGGYGIAYSASD 300

Query: 208 -DYPVKDFCQRLKEFSEKYSVQIYL-------EPGEAIVTNTTTLNTTVLDISENI---- 255
               V+     LK    K +  ++        EPG AI   +T    TV  I +      
Sbjct: 301 SPLDVRSVADDLKARVHKAAHDLHFDPPTLMVEPGRAIAGPSTVTVYTVGTIKDVPTDER 360

Query: 256 --KNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEF-HF 308
             +  + VD  +  ++   L              +  P    + G  C +GDI  E   +
Sbjct: 361 STRRYLAVDGGMSDNIRPALYNAHYDGRVINRLMHGNPIPTRLVGSHCESGDILVEDGIY 420

Query: 309 EKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +++GDRI+      Y  +  + +N    P +           +R  + +D   
Sbjct: 421 PDDIEVGDRIALAGTGAYCFSMSSRYNMFCRPAVVAVRDGHERVMVRRETIDDLLA 476


>gi|161520274|ref|YP_001583701.1| diaminopimelate decarboxylase [Burkholderia multivorans ATCC 17616]
 gi|189353549|ref|YP_001949176.1| diaminopimelate decarboxylase [Burkholderia multivorans ATCC 17616]
 gi|29365470|dbj|BAC66455.1| Diaminopimelate decarboxylase [Burkholderia multivorans]
 gi|160344324|gb|ABX17409.1| diaminopimelate decarboxylase [Burkholderia multivorans ATCC 17616]
 gi|189337571|dbj|BAG46640.1| diaminopimelate decarboxylase [Burkholderia multivorans ATCC 17616]
          Length = 412

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 58/400 (14%), Positives = 119/400 (29%), Gaps = 46/400 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   + + +             +  A K  +   +   +        + SL E
Sbjct: 16  GTPLWVYDADVIRDRIAQLRQFDV-----IRYAQKANSNVHILKLMRDEGACVDAVSLGE 70

Query: 63  VMLGHEKF-----GGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHK 116
           +              E   +     D    A +  +  T+   ++  L +    A     
Sbjct: 71  IERSLAAGFSPAGEPEGVVFTADLVDRPTLAAVLKHGVTVNAGSLDMLERVGQHA--PGH 128

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170
           ++ LR+NP   +      +   P S+ G    D       +      + G+  H      
Sbjct: 129 RVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIALVRQYGLKLVGIHMHIGSGVD 188

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEF 221
            +   S +   +          I+ IS GGG+               Y  +    R +  
Sbjct: 189 -YGHLSQVCDAMVDLVASLGHDIDAISAGGGLSIPYRDGEPRVDVDHYFRQWDAARKRIE 247

Query: 222 SE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279
               ++V+I +EPG  +V    TL T V  ++   K+  + +D+     +   +     A
Sbjct: 248 RHLGHAVRIEIEPGRFLVAEAGTLVTEVQAVNRRPKHDFVLIDAGFNDLMRPAMYGSYHA 307

Query: 280 TIYPNT--------GPYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324
                               + G  C +GD+F +              +IGD +   D  
Sbjct: 308 VSVHAHDGALPEGRPQVDIAIAGPLCESGDVFTQDAGGVVTHRKLPQPQIGDLLFLHDAG 367

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            Y  +  + +N   +    + +        R  +  +   
Sbjct: 368 AYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIGELLA 407


>gi|191636924|ref|YP_001986090.1| Diaminopimelate decarboxylase [Lactobacillus casei BL23]
 gi|190711226|emb|CAQ65232.1| Diaminopimelate decarboxylase [Lactobacillus casei BL23]
 gi|327380949|gb|AEA52425.1| Diaminopimelate decarboxylase [Lactobacillus casei LC2W]
 gi|327384125|gb|AEA55599.1| Diaminopimelate decarboxylase [Lactobacillus casei BD-II]
          Length = 448

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 63/400 (15%), Positives = 122/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           +TP Y+ D   +   +     + + A V   +  A K FA   M++            S 
Sbjct: 26  QTPLYVYDVGAICQQIRAFKRVFEEADVSYAVSYASKAFATIAMYEVAKSEGAHVDVVSG 85

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDK--AQKLH 115
            E+       F     +++   K       A+ +   TII +   +L+   D   A    
Sbjct: 86  GELYTAQAADFPMAAVSFHGNNKSKAELTQALDAGVGTIIVDNFHELDLLDDLLGATVGQ 145

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           + + +R+ P +S          +  S+ G         E  K  +  +  N+ G+  H  
Sbjct: 146 QDVLIRVAPGISAHTHAYDQTGQTDSKFGFDLASGQADEAAKRILADDHLNLLGIHAHIG 205

Query: 167 CENKSFLCFSAMLKNIEK----EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---- 218
            +      F A+ + +          F    + +++GGG              +      
Sbjct: 206 SQIFEVAGFEAVTQKLLHVLNNWHQQFGFIPKVLNVGGGFGIAYTKQDDPLPPEAFVKAI 265

Query: 219 -------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
                   +        I++EPG +IV        TV    +    +  V VD  +  ++
Sbjct: 266 LATLKSQSQTLNWPLPAIWIEPGRSIVGPAGYSLYTVGSRKDVPGLRPYVAVDGGMGDNI 325

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       +              + G+ C +GDI  +         GD +   D   
Sbjct: 326 RPALYQATYTAVLADQPNAAPAEHVHLVGKYCESGDILIDDAPLPTTTPGDVVVVFDTGA 385

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  + +N    P +           +   +  D   N
Sbjct: 386 YGYSMASNYNRNPRPAVVFVENGQAQLVVTRETDADLIKN 425


>gi|88813059|ref|ZP_01128301.1| diaminopimelate decarboxylase [Nitrococcus mobilis Nb-231]
 gi|88789692|gb|EAR20817.1| diaminopimelate decarboxylase [Nitrococcus mobilis Nb-231]
          Length = 425

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 57/379 (15%), Positives = 116/379 (30%), Gaps = 25/379 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  ++ +                 +  A+K  +   + + L +   G    S  E
Sbjct: 30  GTPCYVYSRRAIEAAWRVFDDAFAGHDHLICYAVKANSNLAVLNLLARLGSGFDIVSGGE 89

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++     +     A+          +  +L +    AQ L+++  
Sbjct: 90  LERVLAAGGDPAKVVFSGVAKTEAEMRRALEVGILCFNVESEPELERLAAVAQSLNRRAR 149

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCENK 170
             LRINP V              ++ G          +   +    +V G+ FH   +  
Sbjct: 150 VSLRINPDVDPDTHPYIATGLSENKFGIDIHAVERVYRRAADLPGIDVTGVDFHIGSQLT 209

Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEK 224
                +  L+ +            +I  + +GGG+    +D        + ++L    E 
Sbjct: 210 RIEPITDALERVLALIDRLQGQGIEISHLDVGGGVAIRYRDETPPSIGTYARQLLARLES 269

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLL--YQESATI 281
             +++ LEPG AIV N   L T V  +     ++  IVD+++   +   L   +     +
Sbjct: 270 RPLRVLLEPGRAIVGNAGVLLTRVEYLKHTAQRHFAIVDAAMNDLLRPALYDAWMAIEAV 329

Query: 282 YPNTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            P  G        V G  C + D                ++      Y     + +N   
Sbjct: 330 VPREGDTPTRRYDVVGPVCESADFLARDRELALAAGD-LLAVRSAGAYGFVMSSNYNSRP 388

Query: 339 MPTIAVKNVDGTIKAIREF 357
            P   + + +         
Sbjct: 389 RPAELLADGEVIHLIRERE 407


>gi|224476531|ref|YP_002634137.1| putative diaminopimelate decarboxylase [Staphylococcus carnosus
           subsp. carnosus TM300]
 gi|222421138|emb|CAL27952.1| putative diaminopimelate decarboxylase [Staphylococcus carnosus
           subsp. carnosus TM300]
          Length = 420

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 63/394 (15%), Positives = 125/394 (31%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D+ ++ N +         +G    +  A K F    M   + +        S 
Sbjct: 25  GTPTIVYDEDQIRNQMRRYKEAFDKSGIDYNISYASKAFTCIQMVKLVQEEGLDLDVVSE 84

Query: 61  YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    E        H +       EI   L N     + +++ ++      A  +   
Sbjct: 85  GELYTALEAGYDSSHIHFHGNNKTKHEIQYALENKIGYFVIDSLEEIELINKYASDVVDV 144

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168
           + LR+NP V           +  S+ G   K         +   S+  N+ G+ FH   +
Sbjct: 145 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIKHGLADKAIQNINSSKRLNLKGIHFHIGSQ 203

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR----------- 217
            +           + +       +++ +++GGG      +  V    +            
Sbjct: 204 IEGTDAMIETSNIVIQWLKGLNLEVDLLNIGGGFGIHYVEGDVSFPIETGIKEITYALKD 263

Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLY 275
           + + ++     I +EPG +IV         V  I E       V     +  H+   L  
Sbjct: 264 VAKNNDYPLPTIGIEPGRSIVGEAGVTLYEVGTIKEIPGVNKYVSIDGGMSDHIRTALYG 323

Query: 276 QESATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331
            +   +  N       T  + G+ C +GDI          V  GD ++      Y+ +  
Sbjct: 324 AKYDALLVNREEPANDTVTISGKLCESGDIIARDVKLPESVHRGDYLAILSTGAYHYSMA 383

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + +N +  P++         + I+  S      N
Sbjct: 384 SNYNQMQKPSVFFIKDGKAREVIKRQSLRQLIIN 417


>gi|88802815|ref|ZP_01118342.1| diaminopimelate decarboxylase [Polaribacter irgensii 23-P]
 gi|88781673|gb|EAR12851.1| diaminopimelate decarboxylase [Polaribacter irgensii 23-P]
          Length = 422

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 63/386 (16%), Positives = 114/386 (29%), Gaps = 27/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            +P Y+ D  K+    +           +KL  A+K  +   +   L     G  + S+ 
Sbjct: 22  GSPLYVYDTDKIEAQYNRLTNAFSTVKNLKLNYAVKALSNINILKFLQGIGAGLDTVSIQ 81

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           EV LG       +   +        EI+ V      I  + +S L  F  K       + 
Sbjct: 82  EVQLGLTTGIDPKKIIFTPNGVSLTEIEEVAKLGVQINIDNLSILELFGQK--HPKIPVC 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFL 173
           +RINP +              S+ G         +        N+NG+  H   +     
Sbjct: 140 VRINPHIMAGGNSKISVGHIDSKFGISIHQVPHIKRVVENTGMNINGIHMHTGSDILDID 199

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI---- 229
            F    + I  +       I++I  G G     K+  +    ++L     +         
Sbjct: 200 TFLRATE-ILFDVAKQFENIDFIDFGSGFKVPYKEGDISTDIEQLGLQLSERFNDFCVEY 258

Query: 230 ------YLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIY 282
                   EPG+ +V+        V  + +        VDS     V   +         
Sbjct: 259 GKEITLMFEPGKFLVSEAGVFLAKVNVVKQTTSTVFAHVDSGFNHLVRPMMYDSYHHITN 318

Query: 283 PNTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            +          V G  C   D FG       +   D + F +   Y  +  + +N   +
Sbjct: 319 ISNTEGRDRYYSVVGYICET-DTFGSNRRISEISEEDVLCFHNAGAYCFSMASNYNSRYL 377

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365
           P   + +        +  +  D  +N
Sbjct: 378 PAEVMVHRGEDYLIRKRQTIQDILHN 403


>gi|307104892|gb|EFN53143.1| hypothetical protein CHLNCDRAFT_58576 [Chlorella variabilis]
          Length = 889

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 64/382 (16%), Positives = 120/382 (31%), Gaps = 24/382 (6%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           +P+YL  K+K+  N +      +     +  A+K    + +   L +   G    S  E+
Sbjct: 104 SPFYLYSKEKIRQNYNAYKEALEGLDSIVGYAVKANNNFKIMQCLRELGSGAVLVSGNEL 163

Query: 64  MLGH-EKFGGET-HAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG-- 119
            L     F               E++  + N   I  ++   L   +  A K+ K+    
Sbjct: 164 RLAMMAGFDPTRTIFNGNGKLPRELELAVENGVLINVDSEFDLANIQAAAAKVGKRARVL 223

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCENKSF 172
           +RINP V              S+ G +                  + G   H        
Sbjct: 224 IRINPDVDPQVHPYVSTGLAGSKFGIRNTHLQWFLDQIKADANLELVGAHCHLGSTITKV 283

Query: 173 LCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSEK 224
             F      +    K+       ++++++GGG+              KD    +++    
Sbjct: 284 NIFRDATILMVEFIKQIREQGFDLKFLNIGGGLGIDYARKGDVLPTPKDLIDTVRDLVSS 343

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-HVPDYLLYQESATIYP 283
             + + +EPG ++V N++    TV  +  N     IV     A  +   L          
Sbjct: 344 LGLVLVIEPGRSMVANSSAFVNTVTGVKTNGNKNFIVVDGSMAELIRPSLYDAYQHIELT 403

Query: 284 NTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                   T  V G  C + D  G+         GD +   D   Y ++  + +N    P
Sbjct: 404 APHASEVQTFDVVGPVCESADFLGKDRVLHTPVAGDGLVVMDAGAYCMSMASNYNMKLAP 463

Query: 341 TIAVKNVDGTIKAIREF-SYND 361
                     ++ IR   + +D
Sbjct: 464 EEWWVAERTQLQQIRRSVTLDD 485


>gi|169342342|ref|ZP_02628915.2| diaminopimelate decarboxylase [Clostridium perfringens C str.
           JGS1495]
 gi|169299567|gb|EDS81630.1| diaminopimelate decarboxylase [Clostridium perfringens C str.
           JGS1495]
          Length = 431

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 71/400 (17%), Positives = 126/400 (31%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ID++ + +N        K    G ++  A K F    M + +N+        S 
Sbjct: 29  GTPLYVIDEELVRSNCRRYYNAMKCEERGNRVTYAGKAFINMSMCNLVNEENLYLDVVSG 88

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+       F  E   ++   K        V       I + + +L      AQ+    
Sbjct: 89  GELYTAYKAGFPLERIYFHGNNKSDYEIDLGVRLGIGRFIVDNIHELEVLNSIAQEYGRV 148

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           +K+ LRI P V           +  S+ G         +  K  +E E   +NGL  H  
Sbjct: 149 QKVYLRITPGVEAHTHEYIKTGQLDSKFGFPVIGDTVYDAIKRAMELEYIELNGLHCHIG 208

Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK---------- 212
            +      F    + +             +I+ + LGGG      +              
Sbjct: 209 SQIFDLEPFEDTTEIMLNLINDIKETLGYEIKELDLGGGFGIYYTEGDKPKEIEEYCSVI 268

Query: 213 -DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            +    +          + +EPG +IV N      TV  I E       V     +  ++
Sbjct: 269 INKADEICRKLNMNVPILSIEPGRSIVGNAGLTLYTVGAIKEIPNIRKYVSVDGGMSDNI 328

Query: 270 PDYLLYQESATI----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L      +I      +       V G+ C +GD+         ++ GD ++      
Sbjct: 329 RPALYSANYESIIANRVFDNSKEIVTVAGKCCESGDVLLNSIEMPRMETGDILAIISTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I    +   +   +    +  +Y D   N
Sbjct: 389 YGHSMANNYNRIPKAAVVSVSNGISKVMCKRETYEDLLRN 428


>gi|218289328|ref|ZP_03493562.1| diaminopimelate decarboxylase [Alicyclobacillus acidocaldarius
           LAA1]
 gi|218240434|gb|EED07615.1| diaminopimelate decarboxylase [Alicyclobacillus acidocaldarius
           LAA1]
          Length = 443

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 54/400 (13%), Positives = 113/400 (28%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP    D+  + + +     + +  GV  ++  A K F    +   +++   G    S 
Sbjct: 40  GTPLIAYDEGLIRDTIRAFHRVFQEEGVPYQISYASKAFCTIAICQLVHEEGLGIDVVSG 99

Query: 61  YEVMLGHEKFGG--ETHAYNVAYKDCEIDAVLS-NCDTIIFNTVSQLNKFKDKAQKLHK- 116
            E+           + H +       E++  +      +I +   +++   D  ++    
Sbjct: 100 GELYTALAAGVPASKLHMHGNNKTPEELEYAIESGIGAVIVDNFDEIDLLADILEEKGCT 159

Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNN 166
             + +R+ P V           +  S+ G                + E   V G+  H  
Sbjct: 160 VDVLVRVAPGVEAHTHDYISTGQQDSKFGFDLASHQVEEAFLRLKQVERARVIGVHAHIG 219

Query: 167 CENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            +      F      M    E     F      ++LGGG      D         ++   
Sbjct: 220 SQIFDVEGFRLLADRMAGVYEDGLRRFGLPFSVLNLGGGFGIPYTDEDAPPVADLVRGVI 279

Query: 223 EKYS----------VQIYLEPGEAIVTNTTTLNTTVL------DISENIKNLVIVDSSVE 266
                           +++EPG +IV         V        +   +     +  +  
Sbjct: 280 RAAKAAFAARGMDVPVLWIEPGRSIVGPAGVTLYRVGSRKVIPGVRNYVAIDGGMTDNPR 339

Query: 267 AHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
             +     +   A    +       V G+ C +GD+          + GD ++      Y
Sbjct: 340 LALYGAKYHACYANRAADPPDRPWSVAGKCCESGDMLIWDLPLPDPQPGDILAVFATGAY 399

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366
                + +N I  P +            R  ++ D    L
Sbjct: 400 TYAMASHYNRIPKPAVVFCRDGEARLVARRETWAD-VARL 438


>gi|307327899|ref|ZP_07607081.1| diaminopimelate decarboxylase [Streptomyces violaceusniger Tu 4113]
 gi|306886417|gb|EFN17421.1| diaminopimelate decarboxylase [Streptomyces violaceusniger Tu 4113]
          Length = 463

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 61/398 (15%), Positives = 115/398 (28%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y +D+        +           +  A K F +  +   L +        S  E
Sbjct: 63  GTPGYFLDEDDFRARCRSWREAFGE-DADVFYAGKAFLSRAVVRWLTEEGLNLDVCSAGE 121

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           ++         E  A +   K          +    I+ ++  ++ +    AQ+L K+  
Sbjct: 122 LVTALAAGMPAERIALHGNNKSTGEIERAVEAGVGRIVLDSFQEIARVAHIAQRLGKRQR 181

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
             +RI   V               + G            +  ++ +   + G+  H   +
Sbjct: 182 VQIRITVGVEAHTHEFIATAHEDQKFGIPLAGGLAAEAVRRALKLDGLELIGIHSHIGSQ 241

Query: 169 NKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F      +    G        ++  I LGGG+               + +    
Sbjct: 242 IFDTSGFEVAAHRVVGLLGEIRDEHGVELPEIDLGGGLGIAYTSGDDPREPHEIAKALRD 301

Query: 225 YSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271
              +             +EPG AIV  T      V  + E    +  V VD  +  ++  
Sbjct: 302 IVHRECDAAGLAVPRLSVEPGRAIVGPTAFTLYEVGTVKELPGLRTYVSVDGGMSDNIRT 361

Query: 272 YLLYQESATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326
            L   E +           P  + V G+ C +GDI     F    +  GD I+      Y
Sbjct: 362 ALYDAEYSVALVSRSSTAEPMLSRVVGKHCESGDIVVRDAFLPADLAPGDLIAVPATGAY 421

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N    P +         + +R  +  D   
Sbjct: 422 CRSMASNYNHALRPPVVAVRDGQAREIVRRETEEDLLR 459


>gi|297744419|emb|CBI37681.3| unnamed protein product [Vitis vinifera]
          Length = 399

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 65/387 (16%), Positives = 124/387 (32%), Gaps = 27/387 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+YL  K ++  N +      +     +  A+K      + + L +   G    S  E+ 
Sbjct: 8   PFYLYSKPQITRNFEAYKEALEGLRSIIGYAIKANNNLKILEHLRELGCGAVLVSGNELR 67

Query: 65  LG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGL 120
           L     F      +N       ++         +  ++   L+     A+       + L
Sbjct: 68  LALRAGFDPTRCIFNGNGKLLEDLVLAAQEGVFVNVDSEFDLDNIISAARIAGKKVNVLL 127

Query: 121 RINPSVSYSKFILADPNRPFSRLGE------KCKDKIESEIKNVN--GLMFHNNCENKSF 172
           RINP V              S+ G          D +++    +   G   H        
Sbjct: 128 RINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKV 187

Query: 173 LCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSEK 224
             F      +            +I ++++GGG+              +D    ++E    
Sbjct: 188 DIFRDAAVLMVNYIDEIRAQGFEISYLNIGGGLGIDYYHAGAVLPTPRDLIDTVRELVLS 247

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + + +EPG +++ NT  L   V  +  N  KN V++D S+   +   L          
Sbjct: 248 RDLNLIIEPGRSLIANTCCLVNRVTGVKTNGTKNFVVIDGSMAELIRPSLYDAYQHIELV 307

Query: 284 NTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
           +  P      T  V G  C + D  G+         G  +   D   Y ++  + +N   
Sbjct: 308 SPPPSDAQISTFDVVGPVCESADFLGKDRELPTPPRGAGLVVHDAGAYCMSMASTYNLKM 367

Query: 339 MPTIAVKNVDGTIKAIRE-FSYNDYYN 364
            P       DG++  IR   ++ D+  
Sbjct: 368 RPPEYWVEDDGSMSKIRHGETFEDHVR 394


>gi|307128625|ref|YP_003880655.1| diaminopimelate decarboxylase [Candidatus Sulcia muelleri CARI]
 gi|306483087|gb|ADM89957.1| diaminopimelate decarboxylase [Candidatus Sulcia muelleri CARI]
          Length = 402

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 63/387 (16%), Positives = 116/387 (29%), Gaps = 27/387 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP Y+ D  K+                +K+  A K      +   L +   G  + S+ 
Sbjct: 15  GTPLYVYDANKIEYQYKLIKQSFSYIENLKINYACKANTNISILKFLKKLGSGLDTVSIQ 74

Query: 62  EVMLGH-EKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+ +G    F  +   Y        EI   +     I  + +S L +  +     +  IG
Sbjct: 75  EIEIGLKAGFKPKEIIYTPNSVSLSEIKKAIKAGVRINIDNLSLLEQIGN--DNPNYPIG 132

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCENKSFL 173
           +RINP +              S+ G         +         V G+  H   +     
Sbjct: 133 IRINPHILGGGNKKISVGHIDSKFGISYYQLPHIKKIVENTGIKVEGIHMHTGSDILDIG 192

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI---- 229
            F     +I      F  ++++I  G G     K    K     L    ++  +      
Sbjct: 193 VFLQ-GADILLNVASFFNELKYIDFGSGFKVPYKKNDTKTDIDMLGVSLKRKFLFFCEKY 251

Query: 230 ------YLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIY 282
                 + EPG+ +V+ + +    V  I          VDS     +             
Sbjct: 252 CKKLKLFFEPGKFLVSESGSFLVKVNVIKHTTSTVFAGVDSGFNHFIRPMFYDSYHHIDN 311

Query: 283 PNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            +          V G  C + D F        ++ GD + F +   Y  +  + +N    
Sbjct: 312 ISNPSGILRFYTVVGYICES-DTFCVNRKINEIREGDLLCFRNAGAYCFSMSSNYNSRYR 370

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNNL 366
           P+  +   +      +  +  D  NN+
Sbjct: 371 PSEVIIYNNKDFLIRKRENLQDLLNNM 397


>gi|18309577|ref|NP_561511.1| diaminopimelate decarboxylase [Clostridium perfringens str. 13]
 gi|18144254|dbj|BAB80301.1| diaminopimelate decarboxylase [Clostridium perfringens str. 13]
          Length = 466

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 71/400 (17%), Positives = 125/400 (31%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ID++ + +N        K    G ++  A K F    M + +N+        S 
Sbjct: 64  GTPLYVIDEELVRSNCRRYYNAMKCEEIGNRVTYAGKAFINMSMCNLVNEENLYLDVVSG 123

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+       F  E   ++   K        V       I + + +L      AQ+    
Sbjct: 124 GELYTAYKAGFPLERIYFHGNNKSDYEIDLGVRLGIGRFIVDNIHELEVLNSIAQEYGRV 183

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           +K+ LRI P V           +  S+ G         +  K  +E E   +NGL  H  
Sbjct: 184 QKVYLRITPGVEAHTHEYIKTGQLDSKFGFPVIGDTVYDAIKRAMELEYIELNGLHCHIG 243

Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK---------- 212
            +      F    + +             +I+ + LGGG      +              
Sbjct: 244 SQIFDLEPFEDTTEIMLNLINDIKETLGYEIKELDLGGGFGIYYTEGDKPKEIEEYCSVI 303

Query: 213 -DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            +    +          + +EPG +IV N      TV  I E       V     +  ++
Sbjct: 304 INKADEICRKLNMNVPILSIEPGRSIVGNAGLTLYTVGAIKEIPNIRKYVSVDGGMSDNI 363

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L         A    +       V G+ C +GD+         ++ GD ++      
Sbjct: 364 RPALYSANYESLIANRVFDNSKEIVTVAGKCCESGDVLLNSIEMPRMETGDILAIMSTGA 423

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I    +   +   +    +  +Y D   N
Sbjct: 424 YGHSMANNYNRIPKAAVVSVSNGISKVMCKRETYEDLLRN 463


>gi|300173043|ref|YP_003772209.1| diaminopimelate decarboxylase [Leuconostoc gasicomitatum LMG 18811]
 gi|299887422|emb|CBL91390.1| diaminopimelate decarboxylase [Leuconostoc gasicomitatum LMG 18811]
          Length = 431

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 70/395 (17%), Positives = 126/395 (31%), Gaps = 33/395 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D  K+   +     I +   V   +  A K FA+  ++    Q        S 
Sbjct: 26  GTPLYVYDVTKIRQTMRDFKAIFEKEDVPYVVSYASKAFASKAIYQVAQQEGIHADIVSG 85

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115
            E+       F  +  ++N   K  +    AV     TII +   +L    +   +  + 
Sbjct: 86  GELYTALAAGFDPKHLSFNGNNKSWDELTMAVTEGVGTIIVDNFLELQLLSEITTQNGVK 145

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
           + I LRI+P +S          +  S+ G                ++E  N+ GL  H  
Sbjct: 146 QDILLRISPGISAHTHEFISTGQQDSKFGFDLLTGQAKTAYDIARQNENFNLRGLHAHIG 205

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK----DFCQRLKEFS 222
            +      F      + +    +  Q E I++GGG               ++   +    
Sbjct: 206 SQIFDVTGFEKNAALLAETAKSWGFQPEVINVGGGFGIRYTSEDEPLPESEYADAIIRTL 265

Query: 223 -------EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDYL 273
                  +    +I++EPG +IV        T+    +    ++ + VD  +  ++   L
Sbjct: 266 KSKAAEYDWKMPEIWIEPGRSIVGPAGQTLYTIGSRKDIPDLRHYLAVDGGMGDNIRPAL 325

Query: 274 LYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
                  I  N    +      V G+ C +GD+          K GD +S      Y   
Sbjct: 326 YQANYDAILANNPNASTQEVVRVAGKYCESGDVLVWQQALPKTKPGDILSVLATGAYGYA 385

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             + +N    P +           I   SY     
Sbjct: 386 MASNYNRNPRPAVVFVENGKHQVVIARESYAHLIA 420


>gi|145525334|ref|XP_001448489.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124416033|emb|CAK81092.1| unnamed protein product [Paramecium tetraurelia]
          Length = 408

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 66/391 (16%), Positives = 126/391 (32%), Gaps = 34/391 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYM-DGTTSS 58
            +P Y+ D++ +     T     KN+   G K+L A K      +   +      G  + 
Sbjct: 20  GSPLYVYDEEIIKRQCQTITTALKNSFDQGAKVLYACKANTNPNVLKIMKSNGVHGIDAV 79

Query: 59  SLYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKAQKLH 115
           S  EV +     F      +   Y   E          I  +    +       KA+ + 
Sbjct: 80  SPNEVEVALQAGFLNNQITFTANYMTKEEIDYAIQKGVILNVGEIDTLKKLIAHKAEVI- 138

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---KDK--IESEIKNVNGLMFHNNCENK 170
               +R+N  V        +     S+ G      +    I+ +   + GL  H   +  
Sbjct: 139 ----IRLNLDVGIGHHNHVNTGGNDSKFGINLMWKEQLSEIQKQGVKIIGLHQHMGSKIM 194

Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFS 222
                S +L   +          +  +++I +GGG     +DY     +      +K+  
Sbjct: 195 KKDHDSYLLGIEKLFQAATQELELPYLKYIDIGGGFGVKYQDYEETSDLNLLFSEIKKLY 254

Query: 223 EKYS----VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLYQE 277
           +KY       +++EPG  ++  +  L  TV  I+ N     +   S   H +   L    
Sbjct: 255 DKYFINVKPMLFIEPGRYLIAESGYLLCTVQAINTNKSRTFVGTDSGMHHLIRPALYESY 314

Query: 278 SATIYPNTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
              I             VCG  C +GD+ G       V++ D +  ++   Y  +  + +
Sbjct: 315 HEIINSEEKQVESRLVTVCGNICESGDLLGVDRNL-KVEVNDVLVIQNGGAYGFSMSSNY 373

Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           N    P   +          +  + +    N
Sbjct: 374 NLRERPAEILVRDSKPYIIRKRETLDYLLAN 404


>gi|239928902|ref|ZP_04685855.1| diaminopimelate decarboxylase [Streptomyces ghanaensis ATCC 14672]
 gi|291437228|ref|ZP_06576618.1| diaminopimelate decarboxylase [Streptomyces ghanaensis ATCC 14672]
 gi|291340123|gb|EFE67079.1| diaminopimelate decarboxylase [Streptomyces ghanaensis ATCC 14672]
          Length = 463

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 61/398 (15%), Positives = 118/398 (29%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+                +   +  A K F +  +   L++        S  E
Sbjct: 63  GTPAYILDEADFRARARAWRTAF-GSDADVFYAGKAFLSRAVVRWLHEEGLNLDVCSGGE 121

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +          +  A++   K          +    I+ ++  ++ +    AQ L K+  
Sbjct: 122 LATALSAGMPADRIAFHGNNKSPAEIERAVRAGVGRIVLDSFQEIVRVAHIAQSLGKRQR 181

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
             +RI   V               + G            +  ++ +   V G+  H   +
Sbjct: 182 VQIRITVGVEAHTHEFIATAHEDQKFGIPLAGGQAAEAVRRALQLDGLEVIGIHSHIGSQ 241

Query: 169 NKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F      +             ++  I LGGG+               + +   +
Sbjct: 242 IFDMSGFEVAAHRVVGLLREIRDEHGIELPEIDLGGGLGIAYTSDDDPREPHEIAKALTE 301

Query: 225 YSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271
              +             +EPG AIV  T      V  +      +  V VD  +  ++  
Sbjct: 302 IVTRECEAARLSTPRISVEPGRAIVGPTAFTLYEVGTVKPLEGLRTYVSVDGGMSDNIRT 361

Query: 272 YLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326
            L   E     A+   +  P    V G+ C +GDI     F    +  GD I+      Y
Sbjct: 362 ALYDAEYSVALASRSSDAEPMLCRVVGKHCESGDIVVRDAFLPGDLAPGDLIAVPATGAY 421

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N +  P +   +  G    +R  +  D   
Sbjct: 422 CRSMASNYNHVLRPPVVAVDGGGARVIVRRETEEDLLR 459


>gi|89890668|ref|ZP_01202177.1| diaminopimelate decarboxylase [Flavobacteria bacterium BBFL7]
 gi|89516813|gb|EAS19471.1| diaminopimelate decarboxylase [Flavobacteria bacterium BBFL7]
          Length = 407

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 64/385 (16%), Positives = 115/385 (29%), Gaps = 27/385 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            +P Y+ D  ++++  +        A  +++  A+K  +   +     Q   G  + SL 
Sbjct: 14  GSPVYVYDAHRIVSQYERLTSAFAQAKSLRIHYAVKALSNLSILKLFKQLGAGLDTVSLQ 73

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           EV LG           Y        EI+ V +    I  + +S L +F  K       + 
Sbjct: 74  EVQLGLAAGVEPHKIIYTPNGVSLEEIEQVAAMGVQINIDNLSILEQFGSK--HPTIPVC 131

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE------IKNVNGLMFHNNCENKSFL 173
           +RINP V              S+ G                   VNG+  H   +     
Sbjct: 132 VRINPHVMAGGNANISVGHIDSKFGISIHQIPHLLRIVENTNMTVNGVHMHTGSDILDIG 191

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY--- 230
            F    + + +    F   +E+I  G G     K+  V    + L E   +   +     
Sbjct: 192 VFLYATEILFETAAKF-KDLEFIDFGSGFKVPYKEGDVSTDIEDLGEQLSERFNKFCKDY 250

Query: 231 -------LEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIY 282
                   EPG+ +V+        V  + +        +DS     +   L         
Sbjct: 251 GRDITLAFEPGKFLVSEAGYFLAKVNVVKQTTSTVFAGIDSGFNHLIRPMLYGSYHGIKN 310

Query: 283 PNTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            +          V G  C   D F +      +  GD ++F +   Y  +  + +N    
Sbjct: 311 ISNETGRNRFYSVVGYICET-DTFAQNRQISEITEGDILAFANAGAYCYSMTSNYNSRYR 369

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
           P   +             +  D   
Sbjct: 370 PAEVLWYNGEAHLIRERETMEDILK 394


>gi|255014433|ref|ZP_05286559.1| diaminopimelate decarboxylase [Bacteroides sp. 2_1_7]
          Length = 386

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 70/370 (18%), Positives = 119/370 (32%), Gaps = 25/370 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y  D + L + LD         G  +  A+K  A   +   +     G    S  
Sbjct: 14  LSTPFYYYDVKLLQDTLDVVKTESGKYGYHVHYAVKANANPRILSIIATNGLGADCVSGG 73

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLHK 116
           EV       F  +   +    K      +  + D   FN  +  +L    + A  +    
Sbjct: 74  EVQAALDAGFPADKIVFAGVGKADWEINLGLDNDIFCFNVESAVELEIINELAAAKNKVA 133

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCEN 169
            I LRINP V              ++ G              E +   + G+  H   + 
Sbjct: 134 SIALRINPEVDAHTHAKITTGMKENKFGINLSQLGGVLDKLKEMKHVKLIGIHSHIGSQI 193

Query: 170 KS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226
                F         I++E       +E ++ GGG+                  F+  + 
Sbjct: 194 TDMSSFRNLVIRFNEIQEELEAHGVTVENLNFGGGLGIDYYHPNHLSIPAFDNYFAAIHK 253

Query: 227 -------VQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL--YQ 276
                   Q++ EPG +IV    TL + VL + E   K   I+D+     +   +   Y 
Sbjct: 254 LLQVRPGQQVHFEPGRSIVAQCGTLISKVLYVKEGETKKFAILDAGFTELIRPAMYDAYH 313

Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
               I  +    T  V G  C + D+FG+         GD I+      Y     + +N 
Sbjct: 314 RIENISSDEAVETYDVVGPICESSDVFGKDVELNKAHRGDLIALRSAGAYGEVMASQYNC 373

Query: 337 INMPTIAVKN 346
            ++P     +
Sbjct: 374 RHLPKAYYSD 383


>gi|262277926|ref|ZP_06055719.1| diaminopimelate decarboxylase [alpha proteobacterium HIMB114]
 gi|262225029|gb|EEY75488.1| diaminopimelate decarboxylase [alpha proteobacterium HIMB114]
          Length = 410

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 63/385 (16%), Positives = 133/385 (34%), Gaps = 24/385 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP+Y+    ++  N+       K +   +  A+K  +   +   L +   G    S  E
Sbjct: 26  KTPFYIYSADQIKKNIKLVQSSLKKSNPLICYAVKANSNIQVIRELKKNNVGADVVSAGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--K 117
           + L        +   ++   K  +            I   + S++      ++KL+K  K
Sbjct: 86  LKLALKAGISPKKIVFSGVGKTEDEIKFAIQKGILSINAESESEILSINKISKKLNKIVK 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           IG+RINP +              ++ G    D  +        +   ++ L  H   + K
Sbjct: 146 IGIRINPDIKAKTNKKIATGTKVNKFGVSISDFFQILNSKKNLKNIKIHLLSVHIGSQIK 205

Query: 171 SFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               +  +LK I K          +++++ LGGG+        K++  K F + + +F +
Sbjct: 206 DIGAYKKVLKLISKLLLKLGKTNHEVDYVDLGGGMGIPYFKGDKNFDFKKFGKEVAKFYK 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
           K  V+I  E G  +  N   + + V+ + +  +   I+  +    +    +Y+    I P
Sbjct: 266 KQKVKIIFEIGRFLTGNAGIIISKVIYVKKTREKYFIIIDTGMNDMARSAIYEAFHEILP 325

Query: 284 NT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
                          G  C + D FG +     +K  D +   +   Y     + +N   
Sbjct: 326 IEKNFKKFNKKIEFVGPICESSDTFGIYKNYSILKEEDLVCITNCGAYGRTLSSNYNMRP 385

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYY 363
           +    + +        +     +  
Sbjct: 386 LIEEIIVDKKKLKSVRKRQKIENIV 410


>gi|194468402|ref|ZP_03074388.1| diaminopimelate decarboxylase [Lactobacillus reuteri 100-23]
 gi|194453255|gb|EDX42153.1| diaminopimelate decarboxylase [Lactobacillus reuteri 100-23]
          Length = 436

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 69/398 (17%), Positives = 128/398 (32%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D Q++ + +     + +   V   +  A K F+A  M+  +          S 
Sbjct: 31  GTPLVVYDVQQIRHQIRAFKQVFEENSVDYAVSYASKAFSAIAMYQVVAVEGAHVDVVSG 90

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F     +++   K  E   +    +  TI+ +   ++    D       H
Sbjct: 91  GELYTAIKAGFPMANVSFHGNNKSREELEMAIDHHVGTIMIDNFHEIELLADVLEEHDAH 150

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             + LRI P +S          +  S+ G         E     +E+    + GL  H  
Sbjct: 151 VDVMLRITPGISAHTNKYIQTGQVDSKFGFDLQSGQADEALTKVLENPRMQMKGLHAHIG 210

Query: 167 CENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK--------DF 214
            +      F      +++        F  Q   I++GGG                     
Sbjct: 211 SQIFELAGFEGVAKKLVEVAAHWQEKFNYQAAVINVGGGFGIRYVKDDTPLAPEEFVAAI 270

Query: 215 CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
            + +K   ++       I++EPG +I         TV    +    K  V VD  +  ++
Sbjct: 271 IKAIKTEIKETNLAMPAIWIEPGRSIAGPAGYNLYTVGSRKDVPGLKPYVTVDGGMGDNI 330

Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +  T+  N           V G+ C +GDI  +       K GD ++  D   
Sbjct: 331 RPALYEAQYETVLANNPRAEVVEHVRVAGKYCESGDILSQNQALPATKPGDVLAMLDTGA 390

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
           Y  +  + +N    P +           I+  +Y+D  
Sbjct: 391 YGYSMASNYNRNPRPAVVFAEKGTAQVVIKRETYDDLI 428


>gi|313899022|ref|ZP_07832549.1| diaminopimelate decarboxylase [Clostridium sp. HGF2]
 gi|312956221|gb|EFR37862.1| diaminopimelate decarboxylase [Clostridium sp. HGF2]
          Length = 457

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 57/397 (14%), Positives = 118/397 (29%), Gaps = 37/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D+ K+   +     +   +N   ++L A K F+   +      +       S 
Sbjct: 50  GTPLYVYDENKITQKMSQFHELFQSENFDTEVLYASKAFSCKAIVQMAAIHGLCLDVVSG 109

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    +  F  E   ++   K  +   +   +    I+ +   +       AQ++   
Sbjct: 110 GELYTAMQSGFPMEKIYFHGNNKTWDELIMALEAGVGCIVVDNAMECELLVKAAQRVGTT 169

Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHN 165
           +   +R+NP V              S+ G                         G   H 
Sbjct: 170 VRTLIRVNPGVEAHTHKYIVTAHLDSKFGISISRMEDIRDMIQTLTSIPNIAFEGFHSHI 229

Query: 166 NCENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL--- 218
             +             ++K ++     +    + ++LGGG              Q +   
Sbjct: 230 GSQIFDKDAYVAEIQTLMKFVDDMQKAYGITTKALNLGGGFAAYYTSEDHPIPLQEVCQT 289

Query: 219 -----KEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHV 269
                K   ++Y     ++ +EPG +IV    +    +    +      I  D  +  ++
Sbjct: 290 ILDTCKWERDRYQLPLEKLMIEPGRSIVAEAGSTLYRIGYQKQTENKKYIFVDGGMSDNI 349

Query: 270 PDYLLYQESAT----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L     A             T  V G+ C +GDI  E       +  D +       
Sbjct: 350 RPALYQAAYACDIANRMDEEKSETVTVAGKCCESGDILVENVRLPRAQTNDLLILYTTGA 409

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
           Y  +  + +N +  P +           ++  +Y D 
Sbjct: 410 YGYSMASNYNRLGRPAVVFVKDGKVRFVVKRETYEDM 446


>gi|168064981|ref|XP_001784435.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162664006|gb|EDQ50742.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 414

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 71/389 (18%), Positives = 130/389 (33%), Gaps = 29/389 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+YL  K++L  N +      K     +  A+K      +   L +   G    S  E+ 
Sbjct: 21  PFYLYSKRQLRRNYEAYQEALKGLNSIIGYAVKANNNLKIMRCLRELGSGAVLVSGTELR 80

Query: 65  LGHE--KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKIG 119
           L  E   F      +N       E++        I  ++   L +  + ++      K+ 
Sbjct: 81  LAVEHTGFDPARCVFNGNGKLLEELELAAQYGVLINVDSEFDLAQIIEASRNTGKRIKVL 140

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK--------IESEIKNVNGLMFHNNCENKS 171
           LRINP V              S+ G + +            SE   + G+  H       
Sbjct: 141 LRINPDVDPQVHPYVATGNKNSKFGIRNEKLGWFLEEVKKHSENLELVGVHCHLGSTITK 200

Query: 172 FLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSE 223
              F     ++ +  K+       I+++++GGG+               D    +++   
Sbjct: 201 VDVFRDAAVVMVDFVKKIRGENFTIKYLNIGGGLGIDYYHKGAILPTPTDLIDTVRDLVT 260

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIY 282
           K  + + +EPG ++V NT+   + V  +  N  K+ +++D S+   +   L        +
Sbjct: 261 KEGLTLIIEPGRSLVANTSAFVSHVTGVKTNGTKDFIVIDGSMSELIRPSLYGAYQHIEF 320

Query: 283 PNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                      T  V G  C + D  G+       K GD I   D   Y +   + +N  
Sbjct: 321 VAPPAEGAEVKTFDVVGPVCESADFLGKERELPTPKRGDGIVVHDAGAYCMAMASTYNLR 380

Query: 338 NMPTIAVKNVDGTI--KAIREFSYNDYYN 364
             P       DG    K       +D+  
Sbjct: 381 MRPPEYWVADDGKTVEKIRHAEQLDDHIR 409


>gi|255636652|gb|ACU18663.1| unknown [Glycine max]
          Length = 488

 Score =  210 bits (535), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 62/387 (16%), Positives = 127/387 (32%), Gaps = 27/387 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+YL  K ++  N++      +     +  A+K      + + L     G    S  E+ 
Sbjct: 97  PFYLYSKPQITRNVEAYKDALEGLSSIIGYAIKANNNLKILEHLRHLGCGAVLVSGNELR 156

Query: 65  LG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGL 120
           L     F      +N       ++         +  ++   L    + A++      + L
Sbjct: 157 LALRAGFDPTRCIFNGNGKILEDLVLAAQEGVFVNIDSEFDLENITEAAKRAGKKVNVLL 216

Query: 121 RINPSVSYSKFILADPNRPFSRLGE------KCKDKIESEIKNVN--GLMFHNNCENKSF 172
           RINP V              S+ G          D ++     +   G   H        
Sbjct: 217 RINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKELPNELKLVGAHCHLGSTITKV 276

Query: 173 LCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSEK 224
             F     ++ N   +      +++++++GGG+              +D    +++    
Sbjct: 277 DIFRDAATIMINYIDQIRDQGFEVDYLNIGGGLGIDYYHSGAILPTPRDLIDTVRDLVIS 336

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + + +EPG +++ NT  L   V  +     KN +++D S+   +   L          
Sbjct: 337 RGLNLIIEPGRSLIANTCCLVNRVTGVKSNGSKNFIVIDGSMAELIRPSLYDAYQHIELV 396

Query: 284 NTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
           +  P      T  V G  C + D  G+         G  +   D   Y ++  + +N   
Sbjct: 397 SPAPSNAETTTFDVVGPVCESADFLGKGRELPTPAKGTGLVVHDAGAYCMSMASTYNLKM 456

Query: 339 MPTIAVKNVDGTIKAIRE-FSYNDYYN 364
            P       DG++  IR   ++ D+  
Sbjct: 457 RPPEYWVEDDGSVSKIRHGETFEDHIR 483


>gi|302333012|gb|ADL23205.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           JKD6159]
          Length = 421

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 60/394 (15%), Positives = 124/394 (31%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D+ ++   +       K +G+K  +  A K F    M   + +        S 
Sbjct: 26  GTPTIVYDELQIREQMRRYHRAFKESGLKYNISYASKAFTCLQMVKLVAEEDLQLDVVSE 85

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    E  F      ++   K          +     + +++ +++     A    + 
Sbjct: 86  GELYTALEAGFEPSRIHFHGNNKTKHEIRYALENKIGYFVIDSLEEIDLIDRYANDTVQV 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + +R+NP V           +  S+ G            +  ++S+   + G+  H   +
Sbjct: 146 V-IRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAKTAIEKVLQSKHLKLKGVHCHIGSQ 204

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
            +    F    K +         Q++ ++LGGG      +       ++  +        
Sbjct: 205 IEGTEAFIETAKIVLHWLKEHNIQVDLLNLGGGFGIKYVEGDESFPIEKGIKEITDAIKS 264

Query: 229 IY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274
                        +EPG +IV         V  I E       V     +  H+   L  
Sbjct: 265 EVQLLGIETPELGIEPGRSIVGEAGVTLYEVGTIKEIPGVNKYVSIDGGMSDHIRTALYD 324

Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331
             YQ            T  + G+ C +GDI  +       VK GD ++      Y+ +  
Sbjct: 325 AKYQALLVNRNEDSDDTVTIAGKLCESGDIIIKDAKLPSSVKRGDYLAILSTGAYHYSMS 384

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + +N +  P++         + ++  S      N
Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVVKRQSLRQLIIN 418


>gi|227889926|ref|ZP_04007731.1| diaminopimelate decarboxylase [Lactobacillus johnsonii ATCC 33200]
 gi|227849370|gb|EEJ59456.1| diaminopimelate decarboxylase [Lactobacillus johnsonii ATCC 33200]
          Length = 434

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 66/398 (16%), Positives = 130/398 (32%), Gaps = 38/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D  ++ N +     + +       +  A K FA+  M+   N+    T   S 
Sbjct: 30  GTPLVVYDVSQIRNQIRAFKKVFEEEQLNYAVSYASKAFASIAMYQVANEEGAYTDVVSA 89

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+    +  F  E  +++   K  E   +   ++   I+ +   ++N        Q   
Sbjct: 90  GELYTAMKANFPMERVSFHGNNKSKEELEMAVKNHVGKIMIDNFYEINLLNQVLEEQDSE 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNN 166
             + LRI   +S          +  S+ G   K         + ++++  ++ G+  H  
Sbjct: 150 INVMLRITLGISAHTHEYDQTGQVDSKFGFDLKSGQADKALQEVLKNQRMHMLGIHAHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEW----ISLGGGIHFTDKDYPVK--------DF 214
            +      F      +      +    ++    I++GGG                     
Sbjct: 210 SQIFELNGFEMAAAKLVDVAASWRKNYDYTAQVINVGGGFGIKYVQEDHPLKPEEFVKAI 269

Query: 215 CQRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
            + +K+ + K++     I +EPG +IV         V  + E       V VD  +  ++
Sbjct: 270 VKTIKDEATKHNFPLPEIDIEPGRSIVGPAGYNLYKVGSMKEIPGLVPYVAVDGGMGDNI 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +  T+              V G+ C +GDI         +K GD ++  D   
Sbjct: 330 RPALYQAKYETVLANDPQRKASQEFHVAGKYCESGDILA-DAKLPSLKAGDILAMLDTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
           Y  +  + +N    P +           IR  S  D  
Sbjct: 389 YGYSMASNYNRNPRPAVVFAEDGKAQVVIRRESLEDLV 426


>gi|154249122|ref|YP_001409947.1| diaminopimelate decarboxylase [Fervidobacterium nodosum Rt17-B1]
 gi|154153058|gb|ABS60290.1| diaminopimelate decarboxylase [Fervidobacterium nodosum Rt17-B1]
          Length = 393

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 52/377 (13%), Positives = 120/377 (31%), Gaps = 20/377 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  ++++L  + T   +  +  +    A K      + +       G    S+ E
Sbjct: 19  GTPVYVYSREEILKRISTVKDVFSSVNLFPTFACKANNNPRIIEMFKDNGFGADIVSIGE 78

Query: 63  VMLG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
                      +   +N       EI+ +      +  ++  +   + +       +  L
Sbjct: 79  YHACKLADVDDKKIVWNGNGKTRKEIEILSKKVGYVNIDSEEEYEIWSEI--DSSAEFFL 136

Query: 121 RINPSVSYSKFILADPNRPFSRLGE---KCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
           R+NP V              S+ G    +    +  +  N++G   H   +      F  
Sbjct: 137 RVNPDVDAKTHPHISTGLKKSKFGIQTDEIDRILSKKRLNISGFHVHIGSQITDVEPFEE 196

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKD--YPVKDFCQRLKEFSEKYSVQIYLEPGE 235
            +  +      +      I++GGG     KD    + ++ +R+  + + + + + LE G 
Sbjct: 197 AISKVVDLSKKYG--FSKINIGGGWGIKYKDKELDILEYKERIVPYLKDFKM-VILELGR 253

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESA-TIYPNTGPYTAMV- 292
            ++     L   V  + +      +V D  +   +   +        +         ++ 
Sbjct: 254 YMIAPAGLLVLKVEYVKKTRHKTFVVLDGGMNVLMRPAMYNAYHEVNVLDPESSEKYIID 313

Query: 293 -CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG-- 349
             G  C +GDI       +  K+G  +   DV  Y  +  N +N +  P   +   +   
Sbjct: 314 VVGPLCESGDIIAFERNLEIPKVGSYVIVRDVGAYGYSMSNNYNSMPRPAEVIVYEENGK 373

Query: 350 --TIKAIREFSYNDYYN 364
                  R     + + 
Sbjct: 374 YDFRLIRRREEIEEMFK 390


>gi|258423663|ref|ZP_05686551.1| diaminopimelate decarboxylase [Staphylococcus aureus A9635]
 gi|257846161|gb|EEV70187.1| diaminopimelate decarboxylase [Staphylococcus aureus A9635]
          Length = 421

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 61/394 (15%), Positives = 129/394 (32%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D+ ++   +    +  K +G+K  +  A K F    M   + +        S 
Sbjct: 26  GTPTIVYDELQIREQMRRYHHAFKESGLKYNISYASKAFTCLQMVKLVAEEDLQLDVVSE 85

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    E  F      ++   K          +     + +++ +++     A    + 
Sbjct: 86  GELYTALEAGFEPSRIHFHGNNKTKHEIRYALENKIGYFVIDSLEEIDLIDRYANDTVQV 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + +R+NP V           +  S+ G            +  ++S+   + G+  H   +
Sbjct: 146 V-IRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAKTAIEKVLQSKHLKLKGVHCHIGSQ 204

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ--------RLK- 219
            +    F    K +         Q++ ++LGGG      +       +         +K 
Sbjct: 205 IEGTEAFIETAKIVLHWLKEHNIQVDLLNLGGGFGIKYVEGDESFPIEKGIKEITDAIKS 264

Query: 220 --EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274
             +  +    ++ +EPG +IV         V  I E       V     +  H+   L  
Sbjct: 265 EVQLLDIEPPELGIEPGRSIVGEAGVTLYEVGTIKEIPGVNKYVSIDGGMSDHIRTALYD 324

Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331
             YQ            T  + G+ C +GDI  +       VK GD ++      Y+ +  
Sbjct: 325 AKYQALLVNRNEDSDDTVTIAGKLCESGDIIIKDAKLPSSVKRGDYLAILSTGAYHYSMA 384

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + +N +  P++         + ++  S      N
Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVVKRQSLRQLIIN 418


>gi|57242052|ref|ZP_00369992.1| diaminopimelate decarboxylase [Campylobacter upsaliensis RM3195]
 gi|57017244|gb|EAL54025.1| diaminopimelate decarboxylase [Campylobacter upsaliensis RM3195]
          Length = 402

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 63/383 (16%), Positives = 126/383 (32%), Gaps = 21/383 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP+YL D   + +         K    ++  A+K  +   +   L +   G    S+ E
Sbjct: 11  KTPFYLYDFDLIKSRFLELKSAFKARKSQIFYAMKANSNLSLLQMLARLDSGFDCVSIGE 70

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ----KLHKK 117
           V              ++   K  E        D +  N  S+      ++      L  +
Sbjct: 71  VKRALRVGVKPYKIIFSGVGKSEEELKQALKFDILYINLESEEEMLLLESVAKKLDLKAR 130

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCE-- 168
           I +R+NP+V              ++ G + +   +  +           G+ FH   +  
Sbjct: 131 ISIRVNPNVDAKTHPYISTGLNENKFGVELEVARKMYLYAAKSEFLEPVGVHFHIGSQLL 190

Query: 169 -NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEK 224
                   + ++  + +E      ++++  +GGG+       K+  + D+ Q +      
Sbjct: 191 DISPIHDAALIVAKLLRELKALKIELKFFDVGGGLGVGYEGEKEPCLYDYAQGILANLSG 250

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP 283
             V I LEPG  +V  +  L  +VL      K   ++ D+++   +   L       + P
Sbjct: 251 LDVTIGLEPGRFLVAKSGVLVCSVLYEKITPKKRFMIVDAAMNDLIRPSLYDAYHEIVLP 310

Query: 284 NTGPY--TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
            T        V G  C +GD F +       K GD +  ++   Y  +  + +N      
Sbjct: 311 YTKGEVSPCDVVGGICESGDFFAKDRKLAKSKSGDIVLIKEAGAYGFSMSSNYNTRPRIC 370

Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364
                        +   + D   
Sbjct: 371 ELALENGAVKMVRKREKFEDLIA 393


>gi|221209571|ref|ZP_03582552.1| diaminopimelate decarboxylase [Burkholderia multivorans CGD1]
 gi|221170259|gb|EEE02725.1| diaminopimelate decarboxylase [Burkholderia multivorans CGD1]
          Length = 412

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 58/400 (14%), Positives = 119/400 (29%), Gaps = 46/400 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   + + +             +  A K  +   +   +        + SL E
Sbjct: 16  GTPLWVYDADVIRDRIAQLRQFDV-----IRYAQKANSNVHILKLMRDEGACVDAVSLGE 70

Query: 63  VMLGHEKF-----GGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHK 116
           +              E   +     D    A +  +  T+   ++  L +    A     
Sbjct: 71  IERSLAAGFSPAGEPEGVVFTADLVDRPTLAAVLKHGVTVNAGSLDMLERVGQHA--PGH 128

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170
           ++ LR+NP   +      +   P S+ G    D       +      + G+  H      
Sbjct: 129 RVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIALVRQYGLKLVGIHMHIGSGVD 188

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEF 221
            +   S +   +          I+ IS GGG+               Y  +    R +  
Sbjct: 189 -YGHLSQVCDAMVDLVTSLGHDIDAISAGGGLSIPYRDGEPRVDVDHYFRQWDAARKRIE 247

Query: 222 SE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279
               ++V+I +EPG  +V    TL T V  ++   K+  + +D+     +   +     A
Sbjct: 248 RHLGHAVRIEIEPGRFLVAEAGTLVTEVQAVNRRPKHDFVLIDAGFNDLMRPAMYGSYHA 307

Query: 280 TIYPNT--------GPYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324
                               + G  C +GD+F +              +IGD +   D  
Sbjct: 308 VSVHAHDGALPEGRPQVDIAIAGPLCESGDVFTQDAGGVVTHRKLPQPQIGDLLFLHDAG 367

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            Y  +  + +N   +    + +        R  +  +   
Sbjct: 368 AYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIGELLA 407


>gi|182412489|ref|YP_001817555.1| diaminopimelate decarboxylase [Opitutus terrae PB90-1]
 gi|177839703|gb|ACB73955.1| diaminopimelate decarboxylase [Opitutus terrae PB90-1]
          Length = 434

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 66/403 (16%), Positives = 121/403 (30%), Gaps = 38/403 (9%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           +  TP Y+     +  N            +++  A+K      +    +    G    S 
Sbjct: 24  LYGTPTYVYSATTITENYQRLQRSLSGLDLQVCYAMKANGNLALLRLFSNLGAGFDLVSG 83

Query: 61  YEVMLGHEKFGG--ETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKL--H 115
            E+       G   ++    V   + EI   L N        +  +L +    A  L   
Sbjct: 84  GEIRRVVAAGGNLRKSVFAGVGKSEAEIKLALENQVFAFHVESEPELARINHVAGTLGVK 143

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCE 168
             I +R+NP V           +  ++ G   +    +       +   V G+  H   +
Sbjct: 144 APIAIRVNPDVDAQTHAKITTGKSDNKFGIPLRQAGAAYEAAAKLKNIEVKGVQIHIGSQ 203

Query: 169 NKSFLCFSAMLKNIEKEFG--HFITQIEWISLGGGIHFTD-------------------K 207
             S   F   +K +            I + S+GGG+                        
Sbjct: 204 LTSVAPFVEAVKKLVPFVADLKANHGISYFSIGGGMGIVYRDALASGEQAWWSNQPAGQG 263

Query: 208 DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVE 266
               + + + L        ++I LE G  +V N   L T V  +     KN +IVD+++ 
Sbjct: 264 MITPESYGEALTPLLAPLGLKILLEHGRFMVGNAGVLLTRVEHLKRGASKNFLIVDAAMN 323

Query: 267 AHVPDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFED 322
             V   +       +  +         A + G  C + D F +    + V  G+ ++F  
Sbjct: 324 DLVRPAMYDSYHEIVPLHRDSSRRALVADIVGPVCESTDCFAKDRQLQEVGEGELLAFMS 383

Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              Y     N +N   MP   V             ++     N
Sbjct: 384 AGAYGYAMANRYNARLMPAEVVVRGSSFELVNARETFEQTIAN 426


>gi|325970952|ref|YP_004247143.1| diaminopimelate decarboxylase [Spirochaeta sp. Buddy]
 gi|324026190|gb|ADY12949.1| Diaminopimelate decarboxylase [Spirochaeta sp. Buddy]
          Length = 421

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 69/394 (17%), Positives = 124/394 (31%), Gaps = 30/394 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           + TP+YL D++ +++N      +     G     A+K      +   L+Q   G   SSL
Sbjct: 20  LPTPFYLYDEKAIVDNARNLKKLFSWAPGFCNYYAVKACPNPTILKLLSQEGFGADCSSL 79

Query: 61  YEVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E++L       G+            E  A       I  + ++ +   ++    + + I
Sbjct: 80  PELLLSKASGITGKKIMLTSNDTPADEFKAAYELGAIINLDDITHIQALEEAIGTVPETI 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFHNNC------E 168
             R NP            N   ++ G      ++       K V     H          
Sbjct: 140 CFRYNPGPD-RTGNAIIGNPVEAKYGVTSSQIVDCYRIMKEKGVKHFGLHTMVASNELDG 198

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV- 227
           +        +     +       +IE+I +GGGI    +          + +  +K    
Sbjct: 199 SYIVETARMLFDLCVRIQKEAGIRIEFIDMGGGIGIPYRLDQEAMDLAMVSKEMQKLYET 258

Query: 228 ----------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
                     QI  E G  I      L + VL ++   K+ V +D+S+   +   L    
Sbjct: 259 IVVPAGLDPLQIVFECGRVITGPYGYLVSKVLHVTNKYKDYVGLDASMANLMRPALYGSY 318

Query: 278 SATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                         +T  V G  C   D F        ++ GD +   D   +  +    
Sbjct: 319 HHITVLGKDKQPCDHTYDVTGSLCENNDKFAIDRKLPAMQKGDVVVLHDAGAHGHSMGFN 378

Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           +N        +   DG++  IR   +Y DY   L
Sbjct: 379 YNAKLRSAEYLLKRDGSVVMIRRAQTYEDYVETL 412


>gi|148654582|ref|YP_001274787.1| diaminopimelate decarboxylase [Roseiflexus sp. RS-1]
 gi|148566692|gb|ABQ88837.1| diaminopimelate decarboxylase [Roseiflexus sp. RS-1]
          Length = 445

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 57/398 (14%), Positives = 119/398 (29%), Gaps = 35/398 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG---VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP YL D+  +            +       +  A K      +   +     G    S
Sbjct: 45  GTPLYLFDEMTIRAACRACRTAFADHYRGTTAVHYAGKALLNIAIAQIIADEGLGLDVVS 104

Query: 60  LYEVMLG-HEKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKL-- 114
             E+ +     F  +    +   K       A+ +    II + + +L+  +        
Sbjct: 105 GGELYVALRAGFPTQRIHMHGNAKTHAELEQALAAGIGQIIVDNLDELDMLRRLTAHRSS 164

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNC 167
            + + LRI P+++             S+ G        +  K        + GL  H   
Sbjct: 165 PQPVALRIAPNIAADTHAHIQTGHATSKFGLPLDALDAAAEKLCAASGVRLTGLHAHLGS 224

Query: 168 ENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLK 219
           +             +L +  +    F   IE I+ GGGI            +  +   L 
Sbjct: 225 QLFDRAPYAAAVEVLLDSAARLRDRFGVLIEEINAGGGIGVPYTTDQPLPDIDAWAALLG 284

Query: 220 EFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPD 271
           +   +         +++ +EPG +I+        T++            +D  +  ++  
Sbjct: 285 DSLVRGCERRGLPLMRLVIEPGRSIIARAGVALYTIVATKPLPHMRFLHIDGGMGDNIRP 344

Query: 272 YLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
            L         A    +       + GR C +GD+          ++G+ ++      Y 
Sbjct: 345 ALYDARYTAALAERMRDPVEECVAIAGRYCESGDVLIRDLMLPRARVGEILAVPVAGAYT 404

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           ++  + +N    P + + N        R  +Y D    
Sbjct: 405 LSMASTYNLAPRPAVVLINEGEARLIQRRETYEDLIAR 442


>gi|94986995|ref|YP_594928.1| diaminopimelate decarboxylase [Lawsonia intracellularis PHE/MN1-00]
 gi|94731244|emb|CAJ54607.1| Diaminopimelate decarboxylase [Lawsonia intracellularis PHE/MN1-00]
          Length = 421

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 61/391 (15%), Positives = 113/391 (28%), Gaps = 33/391 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+ ++  +         +       +  + K      +   +        + S  E
Sbjct: 28  GSPLYVYNESIIRQRCKEIKSLSSYPNFFVSYSAKANTNPTLLSIIKDEGCLVDAMSPGE 87

Query: 63  VMLGHE-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           V L  +  F  +   Y        EI   + N   +  +++SQL  +         KI +
Sbjct: 88  VYLHKKVGFKSDEILYVCNNISAEEIQYAIDNKILLSIDSLSQLETYGKL--NPGGKIMV 145

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKSFLC 174
           RINP +              ++ G   +        +++    + G+  H          
Sbjct: 146 RINPGIGTGHHKKVITAGKETKFGINTEQFSDVKKIVDTYQLMLVGINQHIGSLFLDPQN 205

Query: 175 FSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-------- 223
           +   +  + +          Q+E I  GGG     K Y  +      K   +        
Sbjct: 206 YLDSIAFLLQFIDNNPWIFEQLEIIDFGGGFGIPYKKYEEQPRLDLKKMSEQFNTKIMDW 265

Query: 224 ----KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQES 278
                Y  + Y+EPG  I+  +  L  +V  +  N     I  D      +   L     
Sbjct: 266 VASTGYKGRFYIEPGRYIIAESGILLGSVHVVKYNGPIRYIGTDVGFNVLMRPVLYDAYH 325

Query: 279 ATIYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                              V G  C +GDI         ++ GD I   DV  Y     +
Sbjct: 326 EIEVYRKNGTPDLQLIPQTVVGNICESGDIIANKRPLPLIQEGDIIGILDVGAYGFVMSS 385

Query: 333 WFNGINMPTIAVKNVDGT-IKAIREFSYNDY 362
            +N    P   +   +G      +  +  D 
Sbjct: 386 NYNQRPRPAEVLIQQNGEPKLIRKRETIEDM 416


>gi|224284657|gb|ACN40061.1| unknown [Picea sitchensis]
          Length = 488

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 67/397 (16%), Positives = 131/397 (32%), Gaps = 35/397 (8%)

Query: 1   MIKT----PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTT 56
           +I T    P+YL  K ++  N +      K     +  A+K      + + L     G  
Sbjct: 89  VIDTMERRPFYLYSKPQITRNYEAYENALKGLDSIIGYAVKANNNLKILEHLRSLGSGAV 148

Query: 57  SSSLYEVMLGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114
             S  E+ L     F      +N       ++    +    +  ++   L    + A+  
Sbjct: 149 LVSGNELRLALNAGFDPSRCIFNGNGKLLDDLVLAANEGVLVNIDSEFDLENIVEAAKIA 208

Query: 115 HK--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFH 164
            K  ++ LRINP V              S+ G + +                N+ G   H
Sbjct: 209 KKKVQVLLRINPDVDPEVHPYVATGNKNSKFGIRNEKLQWFLDTVKAHPNELNLVGAHCH 268

Query: 165 NNCENKSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKD-----YPVKDFCQ 216
                     F      + +          +I+++++GGG+               D   
Sbjct: 269 LGSTITKVNIFKDAAVLMIQYIDQIRAQGFEIKYLNIGGGLGIDYHHKGEVLPTPMDLIN 328

Query: 217 RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLY 275
            +++     ++ + +EPG ++V N+  L + V+ +  N  KN +++D S+   +   L  
Sbjct: 329 SVRKLVISGNLTLIVEPGRSLVANSGVLVSRVVGVKTNGNKNFIVMDGSMAELIRPSLYG 388

Query: 276 QESATIYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVK--IGDRISFEDVAGYNI 328
                   +         T  V G  C + D  G+           G  +   D   Y +
Sbjct: 389 AYQHIELISPPAPKAKIQTFDVVGPVCESADFLGKDRELPTPAMWAG--MVVHDAGAYCM 446

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           +  + +N    P       DG++K IR   +  D+  
Sbjct: 447 SMASTYNLRMRPAEYWIQDDGSVKKIRHAETIEDHLR 483


>gi|297745130|emb|CBI38969.3| unnamed protein product [Vitis vinifera]
          Length = 399

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 65/387 (16%), Positives = 125/387 (32%), Gaps = 27/387 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+YL  K ++  N +      +     +  A+K      + + L +   G    S  E+ 
Sbjct: 8   PFYLYSKPQIARNFEAYREALEGLRSIIGYAIKANNNLKILEHLRELGCGAVLVSGNELR 67

Query: 65  LG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGL 120
           L     F      +N       ++         +  ++   L+     A+       + L
Sbjct: 68  LALRAGFDPTRCIFNGNGKLLEDLVLAAQEGVFVNVDSEFDLDNIISAARIAGKKVNVLL 127

Query: 121 RINPSVSYSKFILADPNRPFSRLGE------KCKDKIESEIKNVN--GLMFHNNCENKSF 172
           RINP V              S+ G          D +++    +   G   H        
Sbjct: 128 RINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKV 187

Query: 173 LCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSEK 224
             F      +            +I ++++GGG+              +D    ++E    
Sbjct: 188 DIFRDAAVLMVNYIDEIRAQGFEISYLNIGGGLGIDYYHAGAVLPTPRDLIDTVRELVLS 247

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + + +EPG +++ NT  L   V+ +  N  KN V++D S+   +   L          
Sbjct: 248 RDLNLIIEPGRSLIANTCCLVNRVIGVKTNGTKNFVVIDGSMAELIRPSLYDAYQHIELV 307

Query: 284 NTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
           +  P      T  V G  C + D  G+         G  +   D   Y ++  + +N   
Sbjct: 308 SPPPSDAQISTFDVVGPVCESADFLGKDRELPTPPRGAGLVVHDAGAYCMSMASSYNLKM 367

Query: 339 MPTIAVKNVDGTIKAIRE-FSYNDYYN 364
            P       DG++  IR   ++ D+  
Sbjct: 368 RPPEYWVEDDGSVSKIRHGETFEDHVR 394


>gi|221200534|ref|ZP_03573576.1| diaminopimelate decarboxylase [Burkholderia multivorans CGD2M]
 gi|221206215|ref|ZP_03579229.1| diaminopimelate decarboxylase [Burkholderia multivorans CGD2]
 gi|221174227|gb|EEE06660.1| diaminopimelate decarboxylase [Burkholderia multivorans CGD2]
 gi|221179875|gb|EEE12280.1| diaminopimelate decarboxylase [Burkholderia multivorans CGD2M]
          Length = 412

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 60/400 (15%), Positives = 120/400 (30%), Gaps = 46/400 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   + + +             +  A K  +   +   +        + SL E
Sbjct: 16  GTPLWVYDADIIRDRIAQLRQFDV-----IRYAQKANSNVHILKLMRDEGACVDAVSLGE 70

Query: 63  VMLGHEKF-----GGETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
           +              E   +     D     AVL +  T+   ++  L +    A     
Sbjct: 71  IERSLAAGFSPAGEPEGVVFTADLVDRPTLSAVLKHGVTVNAGSLDMLERVGQHA--PGH 128

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170
           ++ LR+NP   +      +   P S+ G    D       +      + G+  H      
Sbjct: 129 RVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIALVRQYGLKLVGIHMHIGSGVD 188

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEF 221
            +   S +   +          I+ IS GGG+               Y  +    R +  
Sbjct: 189 -YGHLSQVCDAMVDLVTSLGHDIDAISAGGGLSIPYRDGEPRVDVDHYFRQWDAARKRIE 247

Query: 222 SE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279
               ++V+I +EPG  +V    TL T V  ++   K+  + +D+     +   +     A
Sbjct: 248 RHLGHAVRIEIEPGRFLVAEAGTLVTEVQAVNRRPKHDFVLIDAGFNDLMRPAMYGSYHA 307

Query: 280 TIYPNT--------GPYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324
                               + G  C +GD+F +              +IGD +   D  
Sbjct: 308 VSVHAHDGALPAGRPQVDIAIAGPLCESGDVFTQDAGGVVTHRKLPQPQIGDLLFLHDAG 367

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            Y  +  + +N   +    + +        R  +  +   
Sbjct: 368 AYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIGELLA 407


>gi|148910718|gb|ABR18426.1| unknown [Picea sitchensis]
          Length = 488

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 67/397 (16%), Positives = 131/397 (32%), Gaps = 35/397 (8%)

Query: 1   MIKT----PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTT 56
           +I T    P+YL  K ++  N +      K     +  A+K      + + L     G  
Sbjct: 89  VIDTMERRPFYLYSKPQITRNYEAYENALKGLDSIIGYAVKANNNLKILEHLRSLGSGAV 148

Query: 57  SSSLYEVMLGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114
             S  E+ L     F      +N       ++    +    +  ++   L    + A+  
Sbjct: 149 LVSGNELRLALNAGFDPSRCIFNGNGKLLDDLVLAANEGVLVNIDSEFDLENIVEAAKIA 208

Query: 115 HK--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFH 164
            K  ++ LRINP V              S+ G + +                N+ G   H
Sbjct: 209 KKKVQVLLRINPDVDPEVHPYVATGNKNSKFGIRNEKLQWFLDTVKAHPNELNLVGAHCH 268

Query: 165 NNCENKSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKD-----YPVKDFCQ 216
                     F      + +          +I+++++GGG+               D   
Sbjct: 269 LGSTITKVNIFKDAAVLMIQYIDQIRAQGFEIKYLNIGGGLGIDYHHKGEVLPTPMDLIN 328

Query: 217 RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLY 275
            +++     ++ + +EPG ++V N+  L + V+ +  N  KN +++D S+   +   L  
Sbjct: 329 SVRKLVISGNLTLIVEPGRSLVANSGVLVSRVVGVKTNGNKNFIVMDGSMAELIRPSLYG 388

Query: 276 QESATIYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVK--IGDRISFEDVAGYNI 328
                   +         T  V G  C + D  G+           G  +   D   Y +
Sbjct: 389 AYQHIELISPPAPKAKIQTFDVVGPVCESADFLGKDRELPTPAMWAG--MVVHDAGAYCM 446

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           +  + +N    P       DG++K IR   +  D+  
Sbjct: 447 SMASTYNLRMRPAEYWIQDDGSVKKIRHAETIEDHLR 483


>gi|169351658|ref|ZP_02868596.1| hypothetical protein CLOSPI_02439 [Clostridium spiroforme DSM 1552]
 gi|169291880|gb|EDS74013.1| hypothetical protein CLOSPI_02439 [Clostridium spiroforme DSM 1552]
          Length = 435

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 59/398 (14%), Positives = 127/398 (31%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++ +  +    +T       K      L A K F+   ++    +Y  G    S 
Sbjct: 30  GTPLYVMSEGHIRQQFNTLKTKMLEKYENTLPLFASKSFSCLAIYKIAKEYGIGIDCVSA 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+ +     F  +   ++   K             + ++ +   ++   ++ A+KL+  
Sbjct: 90  GEISIALKAGFDPKKIYFHGNNKLPSEIEYALSHGVENLVIDNFYEIELVQEIAKKLNIV 149

Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNN 166
           +   +RI P V              ++ G            K  I++   N +G+  H  
Sbjct: 150 VNGVIRITPGVYAGGHDYIRVGAKDTKFGFSSHDNTYLKAIKKVIDASNINFDGIHCHVG 209

Query: 167 CENKSFLCFSAMLKNI----EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            + +    +   +        + +  F   I  ++ GGG              + + +  
Sbjct: 210 SQIEEIQAYVLAMNKFVDIAYEIYDIFGITINKLNAGGGFGICYTKADKPLEFELVVDTI 269

Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVL------DISENIKNLVIVDSSV 265
                            + +EPG   V N      TV       DI + I     +  ++
Sbjct: 270 MDIITKGFEARNLKRPMVLVEPGRYCVGNAGITLYTVGSYKNIKDIRDYISVDGGMTDNI 329

Query: 266 EAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
            + +         A            V G++C +GDI  +    +  K GD ++      
Sbjct: 330 RSSLYAAKYDAIIANKAEMPADRLVTVAGKNCESGDILIKDIMLQDPKPGDILAMFSTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
           Y+    + +N +  P +       + + IR  +++D  
Sbjct: 390 YHYTMSSNYNQLPKPAVVFTYKGKSREVIRRQTFDDLI 427


>gi|110802485|ref|YP_697889.1| diaminopimelate decarboxylase [Clostridium perfringens SM101]
 gi|110682986|gb|ABG86356.1| diaminopimelate decarboxylase [Clostridium perfringens SM101]
          Length = 431

 Score =  209 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 71/400 (17%), Positives = 125/400 (31%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ID++ +  N        K    G ++  A K F    M + +N+        S 
Sbjct: 29  GTPLYVIDEELVRGNCRRYYNAMKCEERGNRVTYAGKAFINMSMCNLVNEENLYLDVVSG 88

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+       F  E   ++   K        V       I + + +L      AQ+    
Sbjct: 89  GELYTAYKAGFPLERIYFHGNNKSDYEIDLGVRLGIGRFIVDNIHELEVLNSIAQEYGRV 148

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           +K+ LRI P V           +  S+ G         +  K  +E E   +NGL  H  
Sbjct: 149 QKVYLRITPGVEAHTHEYIKTGQLDSKFGFPVIGDTVYDAIKRAMELEYIELNGLHCHIG 208

Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK---------- 212
            +      F    + +             +I+ + LGGG      +              
Sbjct: 209 SQIFDLEPFEDTTEIMLNLINDIKETLGYEIKELDLGGGFGIYYTEGDKPKEIEEYCSVI 268

Query: 213 -DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            +    +          + +EPG +IV N      TV  I E       V     +  ++
Sbjct: 269 INKADEICRKLNMNVPILSIEPGRSIVGNAGLTLYTVGAIKEIPNIRKYVSVDGGMSDNI 328

Query: 270 PDYLLYQESATI----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L      +I      +       V G+ C +GD+         ++ GD ++      
Sbjct: 329 RPALYSANYESIIANRVFDNSKEIVTVAGKCCESGDVLLNSIEMPRMETGDILAIISTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N I    +   +   +    +  +Y D   N
Sbjct: 389 YGHSMANNYNRIPKAAVVSVSNGISKVMCKRETYEDLLRN 428


>gi|154494211|ref|ZP_02033531.1| hypothetical protein PARMER_03559 [Parabacteroides merdae ATCC
           43184]
 gi|154086073|gb|EDN85118.1| hypothetical protein PARMER_03559 [Parabacteroides merdae ATCC
           43184]
          Length = 386

 Score =  209 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 66/364 (18%), Positives = 115/364 (31%), Gaps = 25/364 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y  D   L   L+T        G  +  A+K  A   +   + +Y  G    S  
Sbjct: 15  LATPFYFYDITLLKETLNTVKTEAGKYGYHVHYAVKANANPRILSIIAEYGLGADCVSGG 74

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDK--AQKLHK 116
           E+       F      Y    K      +  + D   FN  + ++L   ++   A+    
Sbjct: 75  EIQAALDAGFPARKIVYAGVGKTDWEINLGLDNDIFCFNVESAAELEILEELAAAKNKVA 134

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCEN 169
            I LRINP V              ++ G                E   + G+  H   + 
Sbjct: 135 SIALRINPEVDAHTHAKITTGMKENKFGINLSQLGQVLDLVCRLEHIKLIGIHCHIGSQI 194

Query: 170 KS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEF----- 221
                F      +  I++E      ++E ++ GGG+                  F     
Sbjct: 195 TDMAAFRGLVIRVNEIQEELEARGIKVENLNFGGGLGIDYYHPNHLPIPAFDNYFAVFNK 254

Query: 222 --SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL--YQ 276
               +   Q++ EPG +IV    +L + VL +         + D+     +   +   Y 
Sbjct: 255 LLQLRPGQQVHFEPGRSIVAQCGSLISKVLYVKVGETKKFCILDAGFTELIRPAMYDAYH 314

Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
               I  +       V G  C + D+FG+         GD I+      Y     + +N 
Sbjct: 315 RMENITSDEEVEVYDVVGPICESSDVFGKDVELNRAHRGDLIALRSAGAYGEVMASQYNC 374

Query: 337 INMP 340
             +P
Sbjct: 375 RKLP 378


>gi|15806761|ref|NP_295481.1| diaminopimelate decarboxylase [Deinococcus radiodurans R1]
 gi|13124089|sp|Q9RTK2|DCDA_DEIRA RecName: Full=Diaminopimelate decarboxylase; Short=DAP
           decarboxylase
 gi|6459531|gb|AAF11313.1|AE002017_4 diaminopimelate decarboxylase [Deinococcus radiodurans R1]
          Length = 379

 Score =  209 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 59/370 (15%), Positives = 113/370 (30%), Gaps = 21/370 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP YL D ++L   L            ++  A+K      +         G    SL E
Sbjct: 16  GTPLYLYDAEELDAALWRVQRAFG--DARIFYAMKANPNLNLLRRYAAAGVGFECVSLGE 73

Query: 63  VMLG-HEKFGGET-HAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           ++       GGE       A  D E  A      TI+ +   ++            ++ +
Sbjct: 74  LLRAEAAGAGGERMILNGPAKSDAEYAAAARLGATIVVDREEEVVLL-----PPGSRVLV 128

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174
           R+NP+++ S           S+ G   +        +      V GL  H     +    
Sbjct: 129 RVNPAMTVSTHEHLATGTARSKFGLTPEQVPGTLAELRDAGHEVLGLHMHIGSAIEQAED 188

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
           F+A    + +   H    +  +++GGG         +                ++++EPG
Sbjct: 189 FTAAFARVTELRAHIG-GLSVLNVGGGWSLNADLEGIAYEAHEAARVFG---AELWVEPG 244

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG--PYTAMV 292
             +V +   L T V+      +N  +VD+ +   +   L                    V
Sbjct: 245 RYLVASAGWLLTRVVGTKRTGRNFCLVDAGMTEFLRPMLYGASHPLYPMWDALATEVWDV 304

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352
            G +C +GD+          + G  +   +   Y  +  + +     P   +        
Sbjct: 305 AGPACESGDLIARGVPLPTPQRGHLLLIGEAGAYGASMSSTYLSRPRPAEVLWTGHDWQL 364

Query: 353 AIREFSYNDY 362
             R  +  D 
Sbjct: 365 LRRRETPQDI 374


>gi|294101240|ref|YP_003553098.1| diaminopimelate decarboxylase [Aminobacterium colombiense DSM
           12261]
 gi|293616220|gb|ADE56374.1| diaminopimelate decarboxylase [Aminobacterium colombiense DSM
           12261]
          Length = 430

 Score =  209 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 63/400 (15%), Positives = 124/400 (31%), Gaps = 38/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++ +  +             K    + + A K F    M   +     G    S 
Sbjct: 22  GTPLYVLSETAVRERCREVKKDFLCKYPNTRAVYASKAFLTMAMVRIIASEGLGLDVVSG 81

Query: 61  YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115
            E+       F  E   ++   K  +    A+ +    I+ ++ S+L+  +D A++    
Sbjct: 82  GEIYTAYRAGFPMEKTIFHGNNKTLEELQLALETGVGRIVADSESELDIIEDAARRRGKR 141

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNN 166
             + LR+ P V  +           S+ G                 SE   + G  FH  
Sbjct: 142 ATLLLRVAPGVDAATHQYMATGHTASKFGFPLAGESISRTIQRIKGSENLVLKGFHFHVG 201

Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            + +S       +  + KE            E +++GGG    + +   +   +   E  
Sbjct: 202 SQLQSNRSHCLAVDALIKEMVLFSSDLGFVTEELNVGGGYGVPEHEGEERKPLKYFTEGI 261

Query: 223 EKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            +               I +EPG  IV+        V  I E    +  V     +  + 
Sbjct: 262 MERVIAGCEQAGIPVPAIIIEPGRWIVSEAGITLYKVGSIKEIPGVMTYVSVDGGMTDNP 321

Query: 270 PDYLLYQESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVA 324
              L   +   +  N           + G+ C +GD+  +       +   D ++  +  
Sbjct: 322 RPALYGAKYWGVVANRADELAGKKVTIVGKCCESGDVLMKDVMVTDQITRDDILAVFNTG 381

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            YN +  N +N +  P + +         +    Y D  +
Sbjct: 382 AYNFSMANNYNRLPRPAVVLVREGNAYVIVNRQDYEDLLS 421


>gi|314933578|ref|ZP_07840943.1| diaminopimelate decarboxylase [Staphylococcus caprae C87]
 gi|313653728|gb|EFS17485.1| diaminopimelate decarboxylase [Staphylococcus caprae C87]
          Length = 421

 Score =  209 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 65/394 (16%), Positives = 131/394 (33%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D+ ++ N +       + +G+K  +  A K F    M   + +        S 
Sbjct: 26  GTPTIVYDEDQIRNQMRRYHSAFEKSGLKYNISYASKAFTCIQMVKLVQEEDLQLDVVSE 85

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    E  F      ++   K          +N    + + + +++     A      
Sbjct: 86  GELYTALEAGFDANRIHFHGNNKTKREIQYALENNIGYFVIDALEEIDLIDKYASD-EVN 144

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168
           I LR+NP V           +  S+ G   K             S+   + G+ FH   +
Sbjct: 145 IVLRVNPGVEAHTHEFIQTGQEDSKFGLSIKHGLALEAINKVKASKHLQLKGVHFHVGSQ 204

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK 224
            +         K +         ++E ++LGGG         + +P+++    + +  ++
Sbjct: 205 IEGTEAMIETAKLVLHWLSENEIKVELLNLGGGFGIKYVEGDESFPIEEGIAEIADAIKE 264

Query: 225 YSVQIY-------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274
            +  +        +EPG +IV         V  I E  +    V     +  H+   L  
Sbjct: 265 TAHSLNYEVPEIGIEPGRSIVGEAGITLYEVGTIKEIPEVNKYVSVDGGMSDHIRTALYD 324

Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331
             YQ            T  + G+ C +GDI  +       +K GD ++      Y+ +  
Sbjct: 325 AKYQALLVNRNEEADDTVTIAGKLCESGDIIIKKAKLPSSIKRGDYLAILSTGAYHYSMA 384

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + +N +  P++         + I+  S      N
Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418


>gi|116621306|ref|YP_823462.1| diaminopimelate decarboxylase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116224468|gb|ABJ83177.1| diaminopimelate decarboxylase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 412

 Score =  209 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 59/386 (15%), Positives = 101/386 (26%), Gaps = 23/386 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+     +L N              +  A+K  ++  +   L +   G    S  
Sbjct: 23  VGTPVYVYSSAVILGNYRAYADAFAGLPNTICYAVKANSSLAILALLAKAGAGFDIVSGG 82

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK- 117
           E+              ++   K          S   +    + S+L      A +L K+ 
Sbjct: 83  ELYRVLAAGGDPSKVVFSGVGKTAGEVEYALSSGIRSFNCESESELALIDAMAARLGKQA 142

Query: 118 -IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
              +R+NP V               + G    D      +          G+  H   + 
Sbjct: 143 SFSIRVNPDVDAVTHPYISTGLSQHKFGIAIADAPAVYERARQFRHLVAEGVSCHIGSQI 202

Query: 170 KSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226
                    +  +             I  + LGGG+    +   +            K  
Sbjct: 203 LDLSPIQEAVDKVLALANALREQGHPIRHLDLGGGLGVPYRPTEIAPAIADFVCGLRKRV 262

Query: 227 VQ----IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES--- 278
                 + +EPG +IV     L T VL    N     +V D+++   +   L        
Sbjct: 263 TASNLAVTIEPGRSIVGAAGILLTRVLYRKRNGDKEFMVVDAAMNDLIRPSLYRAHHEIL 322

Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
                   P T  V G  C  GD             GD ++      Y     + +N   
Sbjct: 323 PLRRNALPPVTVDVVGPVCETGDFLARDREMANAMPGDYLAICTAGAYGFVLSSNYNSRP 382

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364
                +   D          Y D   
Sbjct: 383 RAPEVLVTGDTWRVIRERECYADLVR 408


>gi|227832874|ref|YP_002834581.1| Diaminopimelate decarboxylase [Corynebacterium aurimucosum ATCC
           700975]
 gi|262182638|ref|ZP_06042059.1| Diaminopimelate decarboxylase [Corynebacterium aurimucosum ATCC
           700975]
 gi|227453890|gb|ACP32643.1| Diaminopimelate decarboxylase [Corynebacterium aurimucosum ATCC
           700975]
          Length = 445

 Score =  209 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 63/404 (15%), Positives = 122/404 (30%), Gaps = 43/404 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D+Q   +               +  A K F    +   +++       +SL E
Sbjct: 39  GTPLYVFDEQDFRSRCRDMAQAFGGPDH-VHYASKAFITKRIVRWVDEEGLCLDVASLNE 97

Query: 63  VMLGHEK-FGGETHAYNVAYKDCEIDAVLSN--CDTIIFNTVSQLNKFKDKAQKL--HKK 117
             L     F  E    +   K+ E   +  N     ++ +   +L++    A      + 
Sbjct: 98  AKLALAADFPPERMTAHGNNKEDEYLELCVNEGIGHVVLDNAEELSRLNSIAAAAGRVQP 157

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNNCE 168
           + +R+ P V               + G            +  +ES    + GL  H    
Sbjct: 158 VMIRVKPGVDAHTHEFIATAHEDQKFGISLSTGAAFEVARTVLESANLKLVGLHCHVGSS 217

Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDY-----------PVKD 213
             +   F    +      ++        +E + LGGG      +Y            + D
Sbjct: 218 VFNADGFKLAAERVLSLYKRIHSELGVALEELDLGGGFGIPYMEYEEALDVATLAKDLLD 277

Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE--------NIKNLVIVDSSV 265
             +R           + +EPG ++V  +      V  + +         ++  + VD  +
Sbjct: 278 AVERTATELGIKPPFVLVEPGRSLVGASAVTVYRVGTVKDVETGKADLPMRRYLSVDGGM 337

Query: 266 EAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFG-EFHFEKPVKIGDRISF 320
             ++   L   E             P  + + G  C +GDI   E  F   +  GD ++F
Sbjct: 338 SDNIRPALYGSEYDVRVVNRRTQGEPVDSRIVGFHCESGDILVNERRFPSDITTGDLLAF 397

Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
                Y     + +NG   P +           +R  +  D   
Sbjct: 398 ATTGAYQYMMASRYNGALRPAVVSVRDGKASLMLRRETMEDLLA 441


>gi|256847134|ref|ZP_05552580.1| diaminopimelate decarboxylase [Lactobacillus coleohominis
           101-4-CHN]
 gi|256715798|gb|EEU30773.1| diaminopimelate decarboxylase [Lactobacillus coleohominis
           101-4-CHN]
          Length = 438

 Score =  209 bits (532), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 62/397 (15%), Positives = 129/397 (32%), Gaps = 37/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D  ++ N +     +     V+  +  A K F++  ++  + Q        S 
Sbjct: 31  GTPLLVYDVARIRNQMQRFRDVFNQEAVQYEVSYASKAFSSVAIYQVMKQEHAHIDVVSG 90

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+      KF     +++   K  +  A+       TI+ +   ++   K+    +   
Sbjct: 91  GELATAIKAKFPLAKVSFHGNNKSRDELAMALDHEVGTIVVDNFHEIELLKELLANRTQT 150

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNN 166
             + LRI P ++          +  S+ G   +           +     +V GL  H  
Sbjct: 151 VDVQLRITPGIAAHTNSYIATGQVDSKFGFDVESGQADKALQQLLAISQVHVTGLHAHIG 210

Query: 167 CENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F      +++        +    E +++GGG                     
Sbjct: 211 SQIFDVQGFEGVARKLVEIAADWHQKYDFTAEVLNVGGGFGIKYSSEDHPINPEDFVRAI 270

Query: 215 CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIK--NLVIVDSSVEAHV 269
            Q +K+   +       I++EPG +IV        T+    +     + V VD  +  ++
Sbjct: 271 VQVVKKSIHEQNLVMPAIWIEPGRSIVGPAGYTLYTIGSRKDIPGLLSYVSVDGGMGDNI 330

Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +  ++           T  + G+ C +GDI  E       + GD +   D   
Sbjct: 331 RPALYNAKYESVLARDPQAPTVETVKIAGKYCESGDILSEQQDLPATQPGDILVMLDTGA 390

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
           Y+    + +N    P +           I+  +Y+D 
Sbjct: 391 YDYAMASNYNRNPRPAVVFVENGHDQLVIKRETYDDL 427


>gi|87124750|ref|ZP_01080598.1| Diaminopimelate decarboxylase [Synechococcus sp. RS9917]
 gi|86167629|gb|EAQ68888.1| Diaminopimelate decarboxylase [Synechococcus sp. RS9917]
          Length = 453

 Score =  209 bits (532), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 56/405 (13%), Positives = 112/405 (27%), Gaps = 40/405 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLL-LALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP Y++D+  +           +    G  L   A K  ++  M   +     G  + S
Sbjct: 46  GTPLYVLDEASIRAACRAYREALQRHYPGPSLAVYASKANSSLAMTALVASEGLGLDAVS 105

Query: 60  LYEVMLGHEK-FGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115
             E++   E     E    +     D E+     +  T++ +    + +           
Sbjct: 106 AGELLTALEGGMPPERIVLHGNNKSDEELLLAYRSGVTVVADNHHDIERLAQLVPDGGAP 165

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCE 168
            ++ LR  P +              S+ G               +    V+GL  H   +
Sbjct: 166 VRLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQLESVLRSLKGAAWAEVSGLHAHIGSQ 225

Query: 169 NKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDF--------CQR 217
                    +   +             +E ++LGGG+     +                 
Sbjct: 226 IFELDPHRDLAAVMADALRLARGLGHPVEDLNLGGGLGIRYVESDDPPSIDTWVQVVASA 285

Query: 218 LKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDY 272
           + +  E+      ++  EPG ++V         +    E    +  + VD  +  +    
Sbjct: 286 VAKACEERQLSLPRLLCEPGRSLVAAAGVTLYRLGSRKEVPGLRTYLSVDGGMSDNPRPI 345

Query: 273 LLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
                     A         T  + G+ C +GD+  +         GD +       YN 
Sbjct: 346 TYQSLYTACLADRPQAAATETVTLAGKHCESGDVLLKDVALPASASGDVLVVLATGAYNA 405

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN------NLS 367
           +  + +N I  P   + +        R     D          LS
Sbjct: 406 SMSSNYNRIPRPAAVLVHDGEADLIQRRERPEDLLRYDEIPSRLS 450


>gi|134294044|ref|YP_001117780.1| diaminopimelate decarboxylase [Burkholderia vietnamiensis G4]
 gi|134137201|gb|ABO58315.1| diaminopimelate decarboxylase [Burkholderia vietnamiensis G4]
          Length = 412

 Score =  209 bits (532), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 57/400 (14%), Positives = 120/400 (30%), Gaps = 46/400 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   +   +             +  A K  +   +   + +      + SL E
Sbjct: 16  GTPLWVYDADVIRERIAQLRQFDV-----IRYAQKANSNLHILKLMREEGACVDAVSLGE 70

Query: 63  VMLGHEKF-----GGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHK 116
           +              E   +     D    A +  +  T+   ++  L +  + A     
Sbjct: 71  IERSLAAGFSPAGEPEGVVFTADLIDRPTLAAVLKHGVTVNAGSLDMLARVGEHA--PGH 128

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170
           ++ LR+NP   +      +   P S+ G    D       +      + G+  H      
Sbjct: 129 RVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVHRYGLKLVGIHMHIGSGVD 188

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEF 221
            +   S +   +          I+ IS GGG+               Y  +    R +  
Sbjct: 189 -YGHLSQVCDAMVDLVTSLGHDIDAISAGGGLSIPYRDGEPRVDVGHYFNQWDAARKRIE 247

Query: 222 SE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279
               ++V+I +EPG  +V    TL T V  ++   ++  + +D+     +   +     A
Sbjct: 248 RHLGHAVRIEIEPGRFLVAEAGTLVTEVQAVNRRPQHDFVLIDAGFNDLMRPSMYGSYHA 307

Query: 280 TIYPNTGP--------YTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324
                               + G  C +GD+F +              +IGD +   D  
Sbjct: 308 VSVHAPDGTLPAGRPLVDIAIAGPLCESGDVFTQDAGGVVTHRKLPQPQIGDLLFLHDAG 367

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            Y  +  + +N   +    + +        R  +  +   
Sbjct: 368 AYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIGELLA 407


>gi|223043171|ref|ZP_03613218.1| diaminopimelate decarboxylase [Staphylococcus capitis SK14]
 gi|222443382|gb|EEE49480.1| diaminopimelate decarboxylase [Staphylococcus capitis SK14]
          Length = 421

 Score =  209 bits (532), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 65/394 (16%), Positives = 123/394 (31%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D+ ++ N +       + +G+K  +  A K F    M   + +        S 
Sbjct: 26  GTPTIVYDEDQIRNQMRRYHSAFEKSGLKYNISYASKAFTCIQMVKLVQEEDLQLDVVSE 85

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    E  F      ++   K          +N    + + + +++     A      
Sbjct: 86  GELYTALEAGFDANRIHFHGNNKTKREIQYALENNIGYFVIDALEEIDLIDKYASD-EVN 144

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168
           I LR+NP V           +  S+ G   K             S+   + G+ FH   +
Sbjct: 145 IVLRVNPGVEAHTHEFIQTGQEDSKFGLSIKHGLALEAINKVKASKHLQLKGVHFHVGSQ 204

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR----------- 217
            +         K +         ++E ++LGGG      +       +            
Sbjct: 205 IEGTEAMIETAKLVLHWLSENEIKVELLNLGGGFGIKYVEGDESFPIEEGIAEITDAIKE 264

Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274
                     +I +EPG +IV         V  I E  +    V     +  H+   L  
Sbjct: 265 TAHSLNYEVPEIGIEPGRSIVGEAGITLYEVGTIKEIPEVNKYVSVDGGMSDHIRTALYD 324

Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331
             YQ            T  + G+ C +GDI  +       +K GD ++      Y+ +  
Sbjct: 325 AKYQALLVNRNEEADDTVTIAGKLCESGDIIIKKAKLPSSIKRGDYLAILSTGAYHYSMA 384

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + +N +  P++         + I+  S      N
Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418


>gi|170750439|ref|YP_001756699.1| diaminopimelate decarboxylase [Methylobacterium radiotolerans JCM
           2831]
 gi|170656961|gb|ACB26016.1| diaminopimelate decarboxylase [Methylobacterium radiotolerans JCM
           2831]
          Length = 422

 Score =  209 bits (532), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 61/389 (15%), Positives = 109/389 (28%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y      L  +              +  A+K  +   +  TL     G    S  
Sbjct: 25  VGTPFYCYSTATLERHYRVFAEAFAADDALVCFAMKANSNQAVLRTLAARGAGMDIVSGG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQ--KLHK 116
           E+              ++   K       A+ +        +  +L    + A    L  
Sbjct: 85  ELQRALAAGVDPGKIVFSGVGKSRAEMEAALTAGIFCFNVESEPELAVLSEVAVGLGLRA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            + +R+NP V           +  ++ G                    V+G+  H   + 
Sbjct: 145 PVSVRVNPDVDAGTHAKISTGKYENKFGIPITRAPAVYAAAAALPGIAVHGVDMHIGSQI 204

Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQR-----LKEF 221
                F+   + +             +  I  GGG+    +D              L+  
Sbjct: 205 TDLAPFADAARLLAGLARELLAAGHPLRHIDFGGGLGIPYRDDNAPPPDPAALAATLRPH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280
                ++   E G  IV N   L T VL +  +  +  VIVD+++   +   L       
Sbjct: 265 FAPLGLRPVFEIGRMIVGNAGILLTRVLYVKHSEGRTFVIVDAAMNDLIRPTLYEAYHGL 324

Query: 281 IYPNT-GPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                 GP T    A V G  C +GD          V+ GD I+      Y   +   +N
Sbjct: 325 RPVIEPGPETSRLVADVVGPVCESGDYLALNREMPEVRPGDLIAVMSAGAYGAVQSCTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    +   D           +    
Sbjct: 385 TRPLVPEVLVRGDRAAVVRPRLDVDALIA 413


>gi|94312207|ref|YP_585417.1| diaminopimelate decarboxylase [Cupriavidus metallidurans CH34]
 gi|93356059|gb|ABF10148.1| diaminopimelate decarboxylase (DAP decarboxylase) [Cupriavidus
           metallidurans CH34]
          Length = 419

 Score =  209 bits (532), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 58/388 (14%), Positives = 117/388 (30%), Gaps = 26/388 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P ++  +  L    +      K     +  A+K  +   +     Q   G    S  E
Sbjct: 27  GSPTFVYSRAALTAAYNAYAAACKGRNAHVQYAVKANSNLAVLQVFAQLGAGFDIVSGGE 86

Query: 63  VMLG-HEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           ++             ++           A+  +       ++ +L++    A +L K+  
Sbjct: 87  LLRVIAAGGDPRKVVFSGVAKNVADMELALSHDVRGFNVESIPELDRLNAVAGRLGKRAR 146

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
             LRINP V              ++ G   +D + +           V G+  H   +  
Sbjct: 147 VSLRINPDVDAKTHPYISTGLKANKFGVAFEDVLPTYRAAAALPNIEVTGIDCHIGSQIT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               +   L    ++ +       ++E I +GGG+  T  D    D  +      ++   
Sbjct: 207 EVAPYLEALDKVLDVVEALEAEGIKLEHIDVGGGLGITYNDETPPDITKFATTLIDRVAA 266

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES-- 278
                 ++  EPG ++V N   L T V  +         + D+++       +       
Sbjct: 267 RGHGHREVLFEPGRSLVGNAGVLLTRVEFLKPGAAKNFCIVDAAMNDLARPAMYEAFHRI 326

Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                 N       V G  C +GD  G       V+ GD ++      Y     + +N  
Sbjct: 327 EPVAPRNDAGVMYDVVGPVCESGDWLGRDRTLA-VQAGDLLAVMSAGAYGFVMSSNYNTR 385

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYNN 365
                 + + D            D + N
Sbjct: 386 GRAAEVMVDGDTVHLVRERELPADLFRN 413


>gi|28212040|ref|NP_782984.1| diaminopimelate decarboxylase [Clostridium tetani E88]
 gi|28204483|gb|AAO36921.1| diaminopimelate decarboxylase [Clostridium tetani E88]
          Length = 432

 Score =  209 bits (532), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 70/402 (17%), Positives = 126/402 (31%), Gaps = 38/402 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           TP Y+ID+  L             +  G K+  A K F    M   + +        S  
Sbjct: 30  TPLYIIDEDFLRGRCKEYYNNFGVEKHGNKVAYAGKSFLTIAMCQIIKEEGLFLDVVSSG 89

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E+       F      ++   K  +   +         + +   ++N   + A+K    +
Sbjct: 90  ELYTALKANFPMNKIYFHGNNKTLDEIEMGIELGVGKFVVDNFYEMNNINNMARKKGIKQ 149

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNNC 167
            I LRI P +           +  S+ G            +  +     N++G+  H   
Sbjct: 150 SILLRITPGIEAHTHDYIKTGQVDSKFGFSMVGEEVYKAVETALSLPNINLSGIHCHIGS 209

Query: 168 ENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-----DFCQRL 218
           +             M + +++    +  +I  + LGGG                     L
Sbjct: 210 QIFETTPYEEAVDIMFEILKEIKNRYDYEISEVDLGGGFGIYYTKEDKPKETKEYCEAIL 269

Query: 219 KEFSEKYSVQIY------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVP 270
           K+   K            +EPG +I+ N  TL  T+  I E       V     +  ++ 
Sbjct: 270 KKALNKSKELGIKLPMLGIEPGRSIIGNAATLIYTIGAIKEIPGIRKYVSIDGGMNNNIR 329

Query: 271 DYLLYQESAT----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
             L   +          +       + G+ C  GDI  E       K GD ++   V  Y
Sbjct: 330 PALYDAKYECEVANNMNSDDRELVTIAGKCCETGDIVIEDVEISKSKSGDILAIPSVGAY 389

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367
             +  + +N I  P I +     +    +  S++D   N LS
Sbjct: 390 GYSMSSNYNKIPKPAIVLVKDGESRVMCKRESFDDMLKNELS 431


>gi|159464022|ref|XP_001690241.1| diaminopimelate decarboxylase [Chlamydomonas reinhardtii]
 gi|158284229|gb|EDP09979.1| diaminopimelate decarboxylase [Chlamydomonas reinhardtii]
          Length = 473

 Score =  209 bits (532), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 64/381 (16%), Positives = 123/381 (32%), Gaps = 23/381 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           ++P+YL    ++ +N                 A+K      +   L     G    S  E
Sbjct: 84  ESPFYLYSWNRIAHNYAEYKKALAGLDNLPCYAVKANNNLVIMKQLAAAGAGAVLVSGNE 143

Query: 63  VMLGH-EKFGGET-HAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKI 118
           + L     F  +            E++        I  ++   L      A+K      +
Sbjct: 144 LKLAMKAGFDPKRTILNGNGKLPWELELAAEMGVNINIDSEFDLENIAAAARKTGKKVSV 203

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCENKS 171
            LRINP V              S+ G +         +  +  +  + G+  H       
Sbjct: 204 LLRINPDVDPQVHSYVSTGLASSKFGIRNSHIKWFLDEIRKEPLLELVGVHSHLGSTITK 263

Query: 172 FLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEFSE 223
              F     ++ +  K       Q++++++GGG+               D    +++  +
Sbjct: 264 VNIFRDAAVIMCDFVKMIRAEGFQLKYLNIGGGLGIDYSHQGQVLPTPTDLIDTVRDIVK 323

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIY 282
           +  + + +EPG ++V   + L  TV  +  N  KN +++D S+   +   L         
Sbjct: 324 ELGLTLVIEPGRSMVATGSALVNTVTGVKTNGNKNFIVIDGSMATLIRPSLYGAYQHIEL 383

Query: 283 PNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                    T  V G  C +GD  G+         GD I   D   Y ++  + +N    
Sbjct: 384 TKPHSTPVQTFDVVGPICESGDYLGKDRELATPSKGDGIVVHDAGAYCMSMASNYNLKMK 443

Query: 340 PTIAVKNVDGTIKAIREFSYN 360
           P   +    G  K   E + +
Sbjct: 444 PAEYMVENGGLRKIRHEETLD 464


>gi|269203022|ref|YP_003282291.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           ED98]
 gi|262075312|gb|ACY11285.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           ED98]
          Length = 421

 Score =  209 bits (532), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 63/394 (15%), Positives = 123/394 (31%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D+ ++   +       K++G+K  +  A K F    M   + +        S 
Sbjct: 26  GTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTCIQMVKLVAEEDLQLDVVSE 85

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    E  F      ++   K          +N    + +++ ++      A    + 
Sbjct: 86  GELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVIDSLEEIELIDRYANDTVQV 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + LR+NP V           +  S+ G                +S+   + G+  H   +
Sbjct: 146 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAKKAIDKVQQSKHLKLKGVHCHIGSQ 204

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
            +    F    K + +       Q+E ++LGGG      +       +   +        
Sbjct: 205 IEGTEAFIETAKIVLRWLKEQGIQVELLNLGGGFGIKYVEGDESFPIESGIKDITDAIKS 264

Query: 229 IY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274
                        +EPG +IV         V  I E  +    V     +  H+   L  
Sbjct: 265 EIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKEIPEINKYVSIDGGMSDHIRTALYD 324

Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331
             YQ            +  + G+ C +GDI  +       VK GD ++      Y+ +  
Sbjct: 325 AKYQALLVNRNEEADDSVTIAGKLCESGDIIIKDAKLPSSVKRGDYLAILSTGAYHYSMA 384

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + +N +  P +         + I+  S      N
Sbjct: 385 SNYNQMQKPYVFFLKDGKAREVIKRQSLRQLIIN 418


>gi|224080381|ref|XP_002306119.1| predicted protein [Populus trichocarpa]
 gi|222849083|gb|EEE86630.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  209 bits (532), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 60/386 (15%), Positives = 118/386 (30%), Gaps = 26/386 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+YL  K ++  N++      +     +  A+K      + + L     G    S  E+ 
Sbjct: 97  PFYLYSKPQITRNVEAYKDALQGLNSIIGYAIKANNNLKILEHLRGLGCGAVLVSGNELR 156

Query: 65  LG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGL 120
           L     F      +N       ++         +  ++   L      A+       + L
Sbjct: 157 LALRAGFDPTRCIFNGNGKLLDDLVLAAQEGVFVNVDSEFDLENIVAAARIAGKKVNVLL 216

Query: 121 RINPSVSYSKFILADPNRPFSRLGE------KCKDKIESEIKNVN--GLMFHNNCENKSF 172
           RINP V              S+ G          D +++    +   G   H        
Sbjct: 217 RINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHRDELKLVGAHCHLGSTITKV 276

Query: 173 LCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSEK 224
             F      +            +++++++GGG+              +D    ++E    
Sbjct: 277 DIFRDAAVLMVNYIDEIRAQGFEVDYLNIGGGLGIDYYHSGAVLPTPRDLIDTVRELVLS 336

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + + +EPG +++ NT  L   V  +  N  KN V++D S+   +   L          
Sbjct: 337 RDLNLIIEPGRSLIANTCCLVNRVTGVKTNGTKNFVVIDGSMAELIRPSLYDAYQHIELV 396

Query: 284 NTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
           +         T  V G  C + D  G+         G  +   D   Y ++  + +N   
Sbjct: 397 SPASPKAEVSTFDVVGPVCESADFLGKDRELPTPAKGAGLVVHDAGAYCMSMASTYNLKM 456

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364
            P           K     ++ D+  
Sbjct: 457 RPPEYWVEDGTVSKIRHGETFEDHIR 482


>gi|156741027|ref|YP_001431156.1| diaminopimelate decarboxylase [Roseiflexus castenholzii DSM 13941]
 gi|156232355|gb|ABU57138.1| diaminopimelate decarboxylase [Roseiflexus castenholzii DSM 13941]
          Length = 448

 Score =  209 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 56/398 (14%), Positives = 115/398 (28%), Gaps = 35/398 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK---NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP YL D++ + +   T              +  A K      +   +     G    S
Sbjct: 42  GTPLYLFDEETIRSACRTWRTALAACYRGETAVHYASKALLNTALTHLIADEGLGLDVVS 101

Query: 60  LYEVMLG-HEKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDK--AQKL 114
             E+ +     F  +    +   K       A+ S    II + + +L    +    +  
Sbjct: 102 GGELYVALRAGFPPQRIHMHGNAKTRAELEQALASGIGQIIVDNLDELAMLANLTAYRSP 161

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNC 167
            + I LRI P +  +           S+ G          +    +    + GL  H   
Sbjct: 162 PQPIALRIAPDIVTNTHAHIQTGHATSKFGLPLDALDAAAERLRTAPGLCLIGLHAHLGS 221

Query: 168 ENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223
           +      ++A +  +              I+ I++GGG                L     
Sbjct: 222 QLFDLEPYAAEIDTLLDSASRLRDRHGFIIQQINIGGGAGVPYTADQHPFDVHALAMRLG 281

Query: 224 KYSV-----------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPD 271
           +               + +EPG +I+        T++            +D  +  ++  
Sbjct: 282 EALTDECRRRGFPLLHLVIEPGRSIIARAGVALYTIIATKNLPHMRFLHIDGGMGDNIRP 341

Query: 272 YLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
            L     + +           +  + GR C +GD+           +GD ++      Y 
Sbjct: 342 ALYGARYSAVLAERANAPIEESVAITGRYCESGDVLIHAAPLPRASVGDILAVPVAGAYT 401

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           ++  + +N    P + + N        R  +Y D    
Sbjct: 402 LSMASTYNLTPRPAVVMVNGGSVRLIQRRETYEDMIAR 439


>gi|313672479|ref|YP_004050590.1| diaminopimelate decarboxylase [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312939235|gb|ADR18427.1| diaminopimelate decarboxylase [Calditerrivibrio nitroreducens DSM
           19672]
          Length = 417

 Score =  209 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 68/393 (17%), Positives = 123/393 (31%), Gaps = 30/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+++ D++ +  N      +   N G K   A+K      +   L +   G   SSL 
Sbjct: 21  PTPFHIYDEKGIRENARRLKNVFSWNKGFKEFFAVKACPNPYILKILKEEGFGADCSSLP 80

Query: 62  EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E++L       GE   +        E          I  + ++ ++  ++   KL + + 
Sbjct: 81  ELVLSEKVGIVGEEIMFTSNETPANEYKKAYELGAIINLDDITHISYLENTLGKLPELLC 140

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFHNNCENK----- 170
            R NP        +       ++ G       E       K V     H    +      
Sbjct: 141 FRYNPGPLREGNAIIGKP-EEAKYGFTKAQLFEGYKIIKEKGVKRFGLHTMVASNELNPD 199

Query: 171 -SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
                   +L+ + +       + E+I++GGGI    +        Q +    +     +
Sbjct: 200 YFIETVRMLLELVLEINKELGIKFEFINMGGGIGIPYRPGQKAVDLQYVSNGIKSLFETM 259

Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                      Y+E G  I      L T  +      KN + VD+ +   +   +     
Sbjct: 260 LKGSGMEDLKLYMENGRMITGPYGYLVTKAIHRKNIYKNYIGVDACMANLMRPGMYGAYH 319

Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                            V G  C   D F        ++IGD I   D   +       +
Sbjct: 320 HITVMGKENAKHDKVYDVVGSLCENNDKFAIDRNLPEIEIGDIIVIHDTGAHGYAMGFNY 379

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       +   DGT++ IR   + +DY+  L
Sbjct: 380 NGKLRSAELLLKEDGTVEQIRRAETIDDYFATL 412


>gi|220904861|ref|YP_002480173.1| diaminopimelate decarboxylase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869160|gb|ACL49495.1| diaminopimelate decarboxylase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 425

 Score =  209 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 57/394 (14%), Positives = 113/394 (28%), Gaps = 34/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ ++  L       + +  + G  +  ++K  +   +     +      + S  E
Sbjct: 28  GTPLYVYNENVLRQRCRDLMGLSSHPGFGVNYSVKANSNPVLLRMAREEGLVVDAMSPGE 87

Query: 63  VML-GHEKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGL 120
           + +     F      Y       E           I  ++V+QL+           K+ +
Sbjct: 88  LHMDLLAGFTPGQILYISNNNSVEELQNALKHGLLISVDSVAQLDDLGRI--NKGGKVMI 145

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNC----ENK 170
           R NP +              ++ G   +        ++     + G+  H          
Sbjct: 146 RFNPGIGAGHHAKVVTAGKETKFGVNPEQMDDVFALLQKHDMTLAGINQHIGSLFMEAGG 205

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF----------CQRLKE 220
                  +L+  E+     +  +E I  GGG     + Y  +               +  
Sbjct: 206 YLDAAEVLLRLAEQLPQGALQHLEIIDFGGGFGIPYRKYEGQPRLDTGELGSRLHALISA 265

Query: 221 FSEK--YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQE 277
           +++K  Y+ +  +EPG  +      L   V  +  N +      D      V   +    
Sbjct: 266 WAKKTGYTGRFLIEPGRYVAAECGVLLGRVHAVKNNSEKRYAGTDLGFNVLVRPAMYDSF 325

Query: 278 SATIYPNTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                     +         V G  C +GDI  +      +  GD +   D   Y     
Sbjct: 326 HDVEIYGENSHEKRETMVQTVVGNICESGDILAKDRELPEIVEGDVLGILDAGAYGFTMS 385

Query: 332 NWFNGINMPTIAVKNVDG-TIKAIREFSYNDYYN 364
           + +N    P   +   DG      R  S +D   
Sbjct: 386 SNYNQRLRPAEVLIQSDGTARLIRRRESPDDLAR 419


>gi|150008634|ref|YP_001303377.1| diaminopimelate decarboxylase [Parabacteroides distasonis ATCC
           8503]
 gi|298376070|ref|ZP_06986026.1| diaminopimelate decarboxylase [Bacteroides sp. 3_1_19]
 gi|149937058|gb|ABR43755.1| diaminopimelate decarboxylase [Parabacteroides distasonis ATCC
           8503]
 gi|298267107|gb|EFI08764.1| diaminopimelate decarboxylase [Bacteroides sp. 3_1_19]
          Length = 385

 Score =  209 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 70/370 (18%), Positives = 118/370 (31%), Gaps = 25/370 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y  D + L + LD         G  +  A+K  A   +   +     G    S  
Sbjct: 14  LSTPFYYYDVKLLQDTLDVVKTESGKYGYHVHYAVKANANPRILSIIAANGLGADCVSGG 73

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK--FKDKA--QKLHK 116
           EV       F  +   +    K      +  + D   FN  S +      + A  +    
Sbjct: 74  EVQAALDAGFPADKIVFAGVGKADWEINLGLDNDIFCFNVESAVELGIINELAAAKNKVA 133

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCEN 169
            I LRINP V              ++ G              E +   + G+  H   + 
Sbjct: 134 SIALRINPEVDAHTHAKITTGMKENKFGINLSQLGGVLDKLKEMKNVKLIGIHSHIGSQI 193

Query: 170 KS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226
                F         I++E       +E ++ GGG+                  F+  + 
Sbjct: 194 TDMSSFRNLVIRFNEIQEELEAHGVTVENLNFGGGLGIDYYHPNHLSIPAFDNYFAAIHK 253

Query: 227 -------VQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL--YQ 276
                   Q++ EPG +IV    TL + VL + E   K   I+D+     +   +   Y 
Sbjct: 254 LLQVRPGQQVHFEPGRSIVAQCGTLISKVLYVKEGETKKFAILDAGFTELIRPAMYDAYH 313

Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
               I  +    T  V G  C + D+FG+         GD I+      Y     + +N 
Sbjct: 314 RIENISSDEAVETYDVVGPICESSDVFGKDVELNKAHRGDLIALRSAGAYGEVMASQYNC 373

Query: 337 INMPTIAVKN 346
            ++P     +
Sbjct: 374 RHLPKAYYSD 383


>gi|291534314|emb|CBL07426.1| Diaminopimelate decarboxylase [Roseburia intestinalis M50/1]
 gi|291538057|emb|CBL11168.1| Diaminopimelate decarboxylase [Roseburia intestinalis XB6B4]
          Length = 427

 Score =  209 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 63/391 (16%), Positives = 128/391 (32%), Gaps = 29/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +  N          N G +   A+K      + D L +Y  G   +SL 
Sbjct: 20  PTPFHLYDEKGIRENAKAVKEAFSWNPGFREYFAVKATPNPYILDILKEYDCGCDCASLT 79

Query: 62  EVMLGH-EKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+ML   + F G+   ++       E          I  +  + ++  +    K+ + I 
Sbjct: 80  ELMLADSQGFDGKHIMFSSNDTPAEEFKFANELGAIINLDDFTHIDFLEKTIGKIPETIS 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE---------SEIKNVN-GLMFHNNCEN 169
            R NP   +        N   ++ G   +  IE         ++   V+  L  +     
Sbjct: 140 CRYNPGGVFKMSNGIMDNPGDAKYGFTHEQIIEGFKILKEKGAKHFGVHAFLASNTVTNE 199

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS--- 226
                   + + + +        I++I+L GG+          +  + + +  ++     
Sbjct: 200 YYPKLARQLFELVVELRDKTGCDIQFINLSGGVGVPYTPDQTPNDIRVIGQGVKEAFEEI 259

Query: 227 --------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                   + IY E G  ++     L T  +      K  + VD+     +   +     
Sbjct: 260 LVPAGLGNISIYTEMGRFMLAPYGCLVTKAIHEKHTYKEYIGVDACAVNLMRPAIYGAYH 319

Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        + +GD +   D   +  +    +
Sbjct: 320 HITVMGKEDEPCDHKYDVTGSLCENCDKFAIDRMLPKIDMGDLLVIHDAGAHGFSMGYNY 379

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   DG+ + IR   + +DY+ 
Sbjct: 380 NGKLRSAEVLLKEDGSTQLIRRAETPDDYFR 410


>gi|161507355|ref|YP_001577309.1| diaminopimelate decarboxylase [Lactobacillus helveticus DPC 4571]
 gi|160348344|gb|ABX27018.1| Diaminopimelate decarboxylase [Lactobacillus helveticus DPC 4571]
          Length = 438

 Score =  209 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 60/398 (15%), Positives = 120/398 (30%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D +++ + +     + +   VK  +  A K FA   M+         T   S 
Sbjct: 31  GTPLVVYDVEQIRHQIRAFKKVFEEENVKYVVSYASKAFACIAMYQVAAAEGAYTDVVSD 90

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+    +  F  +  +++   K      +   ++   II +   ++             
Sbjct: 91  GELYTALKVNFPVKKISFHGNNKSKSELEMAVKNHIGKIIIDNFHEIKLLDQVLRKHDAK 150

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             + LRI P +S          +  S+ G            +  + +   N+ G+  H  
Sbjct: 151 IDVMLRITPGISAHTHEYDQTGQVDSKFGFDLESGQADLALEQVLANSRMNMIGIHAHIG 210

Query: 167 CENKSFLCFSAM----LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-----DFCQR 217
            +      F       ++  E     +    + I++GGG                     
Sbjct: 211 SQIFELNGFEMAAKKLMEVAENWRSQYGYTAQVINVGGGFGIKYTAEDNPLRPEEFVRAI 270

Query: 218 LKEFSEKYSVQIY------LEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHV 269
           +K   ++     +      +EPG +IV        T     I       V VD  +  ++
Sbjct: 271 VKTIKKEAKNAAFPLPEIDIEPGRSIVGPAGYNLYTTGSRKIVPGHCPYVTVDGGMGDNI 330

Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +  T+              + G+ C +GDI  +       K G  ++  D   
Sbjct: 331 RPALYDAKYETVLATDPRADLTEHVRIAGKYCESGDILADDQALPATKSGSLLAMLDTGA 390

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
           Y  +  + +N    P +           I+  S  D  
Sbjct: 391 YGYSMASNYNRNARPAVVFAENGKAQLVIKRESLEDLV 428


>gi|168025185|ref|XP_001765115.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683702|gb|EDQ70110.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 515

 Score =  209 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 68/389 (17%), Positives = 127/389 (32%), Gaps = 29/389 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+YL  K++L  N +      +     +  A+K      +   L +   G    S  E+ 
Sbjct: 122 PFYLYSKKQLRRNYEAYQEALQGLNSIIGYAVKANNNLKIMQHLRELGSGAVLVSGTELR 181

Query: 65  LG--HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKIG 119
           L   H  F      +N       E++        I  ++   L +  + ++      K+ 
Sbjct: 182 LAVEHADFDPARCVFNGNGKLLEELELAAQYGVLINVDSEFDLAQIIEASRITGKKVKVL 241

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCENKS 171
           LRINP V              S+ G + +       +         + G+  H       
Sbjct: 242 LRINPDVDPQVHPYVATGNKNSKFGIRNEKLWWFLEQVKSHPDNLELVGVHCHLGSTITK 301

Query: 172 FLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSE 223
              F     ++ +   +       I+++++GGG+              KD    ++E   
Sbjct: 302 VDVFRDAAVVMVDFVNKIRSENFNIQYLNIGGGLGIDYYHKGAVLPTPKDLIDTVRELVT 361

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESA--- 279
           K  + + +EPG ++V NT+   + V  +  N  KN +++D S+   +   L         
Sbjct: 362 KEGLTLIIEPGRSLVANTSVFVSNVTGVKTNGTKNFIVIDGSMSELIRPSLYDAYQHIEF 421

Query: 280 --TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                      T  V G  C + D  G+       K GD +   D   Y +   + +N  
Sbjct: 422 VAPPAEGAEAKTYDVVGPVCESADFLGKERQLATPKRGDVLVVHDAGAYCMAMSSTYNLR 481

Query: 338 NMPTIAVKNVDGTI--KAIREFSYNDYYN 364
                     DG    K       +D+  
Sbjct: 482 MRAPEYWVLEDGKTVEKIRHAEQLDDHIR 510


>gi|323466762|gb|ADX70449.1| Diaminopimelate decarboxylase [Lactobacillus helveticus H10]
          Length = 438

 Score =  209 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 59/398 (14%), Positives = 118/398 (29%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D  ++ + +     + +   VK  +  A K FA   M+         T   S 
Sbjct: 31  GTPLVVYDVGQIRHQIRAFKKVFEEENVKYAVSYASKAFACIAMYQVAAAEGAYTDVVSD 90

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+    +  F  +  +++   K      +   ++   II +   ++             
Sbjct: 91  GELYTALKANFPVKKISFHGNNKSKSELEMAVKNHIGKIIIDNFHEIKLLDQVLRKHDAK 150

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             + LRI P +S          +  S+ G            +  + +   N+ G+  H  
Sbjct: 151 IDVMLRITPGISAHTHEYDQTGQVDSKFGFDLESGQADLALEQVLANSRMNMIGIHAHIG 210

Query: 167 CENKSFLCFSAM----LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-----DFCQR 217
            +      F       ++  E     +    + I++GGG                     
Sbjct: 211 SQIFELNGFEMAAKKLMEVAENWRSQYGYTAQVINVGGGFGIKYTAEDNPLRPEEFVRAI 270

Query: 218 LKEFSEKYSVQIY------LEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHV 269
           +K   ++     +      +EPG +IV        T     I       V VD  +  ++
Sbjct: 271 VKTIKKEAKNAAFPLPEIDIEPGRSIVGPAGYNLYTTGSRKIVPGHCPYVTVDGGMGDNI 330

Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   +              + G+ C +GDI  +       K G  ++  D   
Sbjct: 331 RPALYDAKYEIVLATDPRADLTEHVRIAGKYCESGDILADDQALPATKSGSLLAMLDTGA 390

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
           Y  +  + +N    P +           I+  S  D  
Sbjct: 391 YGYSMASNYNRNARPAVVFAENGKAQLVIKRESLEDLV 428


>gi|254431387|ref|ZP_05045090.1| diaminopimelate decarboxylase [Cyanobium sp. PCC 7001]
 gi|197625840|gb|EDY38399.1| diaminopimelate decarboxylase [Cyanobium sp. PCC 7001]
          Length = 472

 Score =  209 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 53/396 (13%), Positives = 110/396 (27%), Gaps = 34/396 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKL-LLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP Y++D+  L  +             G  L L A K  ++  +   + Q   G  + S
Sbjct: 65  GTPLYVLDEATLRASCRAYSRALSQAYPGPSLALYASKANSSVAITALVAQEGLGLDAVS 124

Query: 60  LYEVMLGHEK-FGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             E++         E    +       E+        T++ +    +    + A +L + 
Sbjct: 125 AGELLTALAGGMPPERIVLHGNNKSLEELALAADRGVTVVADNWRDIELLTELAPQLRQP 184

Query: 118 IGLRIN--PSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCE 168
           + L +   P +              S+ G                    + GL  H   +
Sbjct: 185 VRLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQLETVLQHLAACGWARLTGLHAHIGSQ 244

Query: 169 NKSFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL------- 218
                       ++ +  +        +  +++GGG+             +         
Sbjct: 245 IFELQPHRDLAGVMADGLQLARSLGHPVTDLNVGGGLGIRYVVSDDPPTIEDWVRTVAGA 304

Query: 219 ----KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDY 272
                        ++  EPG ++V        TV         +  + VD  +  +    
Sbjct: 305 VAQACRDRNLELPRLLCEPGRSLVATAGLTLYTVGSRKTIPGLRTYLAVDGGMSDNPRPI 364

Query: 273 LLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
                   +  +        T  V G+ C +GD+  +     P   GD ++      YN 
Sbjct: 365 TYQSPYTAVLADRPGAEASETVTVAGKHCESGDVLLKDIALPPATSGDLLAVFATGAYNA 424

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +  + +N I  P   + +        R     D   
Sbjct: 425 SMASNYNRIPRPAAVLVHDGMADLVQRREQPEDLLR 460


>gi|329769060|ref|ZP_08260482.1| diaminopimelate decarboxylase [Gemella sanguinis M325]
 gi|328839551|gb|EGF89127.1| diaminopimelate decarboxylase [Gemella sanguinis M325]
          Length = 430

 Score =  209 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 64/399 (16%), Positives = 129/399 (32%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D+  L N  DT +   K+   K  +L A K F+   +    N+   G    SL
Sbjct: 29  GTPLYVYDENMLENQCDTFISNFKSEKFKTEVLYASKAFSCLEVLRMANRAGLGVDVVSL 88

Query: 61  YEVMLG-HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115
            E+       +      ++     ++    A+     TI+ +   +     D A++    
Sbjct: 89  GEIHTAYKAGYDMSKAYFHGNNKTREELKYAIEVGLGTIVIDNDYEYEMINDLAKESKKT 148

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             + LRIN  +           +  S+ G         +   D       N  G   H  
Sbjct: 149 VDVLLRINTGIDAHTHEYIKTAKDDSKFGYSVYDETIFDLIADINGQSNLNFLGFHSHIG 208

Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD--------F 214
            +       +     +++   +        I+ ++LGGG      D             +
Sbjct: 209 SQIFEKSSFYEAAKVVMEFSRRVEEELRLTIKVLNLGGGFGVYYTDEDKPFELGEFLQEY 268

Query: 215 CQRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
            + ++  SE +     ++ +EPG ++  N  +   TV  + +    +  + VD  +  + 
Sbjct: 269 IKVIETESENFGLELEKVVIEPGRSLTCNAGSTLYTVGGVKKTFAGREYIFVDGGMADNP 328

Query: 270 PDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +      N           V G+ C +GD+          + GD +       
Sbjct: 329 RYALYKAKYEAALANKINADENTVYTVAGKCCESGDMLVMDTKLPKAEQGDLLIVPSTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           YN +  + +N +    +       +   I+  +  D   
Sbjct: 389 YNYSMSSNYNRLPKLPVVFVKDGTSRLVIKGETLEDLIR 427


>gi|258510731|ref|YP_003184165.1| diaminopimelate decarboxylase [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257477457|gb|ACV57776.1| diaminopimelate decarboxylase [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 443

 Score =  209 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 57/400 (14%), Positives = 114/400 (28%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP    D+  + + +     + ++ GV  ++  A K F    +    ++   G    S 
Sbjct: 40  GTPLIAYDEGLIRDTIRAFHRVFQDEGVPYQISYASKAFCTMAICQLAHEEGLGIDVVSG 99

Query: 61  YEVMLGHEKFGG--ETHAYNVAYKDCEIDAVLS-NCDTIIFNTVSQLNKFKDKAQK--LH 115
            E+           + H +       E++  +      +I +   +++   D  Q+    
Sbjct: 100 GELYTALAAGVPASKLHMHGNNKTPEELEYAIESGIGAVIVDNFDEIDLLADILQETGRT 159

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             + +R+ P V           +  S+ G         E      E E   V G+  H  
Sbjct: 160 VDVLVRVAPGVEAHTHDYISTGQQDSKFGFDLASHQVEEAFSRLKEVERARVIGVHAHIG 219

Query: 167 CENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            +      F      M    E     F      ++LGGG      D         ++   
Sbjct: 220 SQIFDVEGFRLLADRMAGVYEDGLRRFGLPFSVLNLGGGFGIPYTDEDAPPVADLVRGVI 279

Query: 223 EKYS----------VQIYLEPGEAIVTNTTTLNTTVL------DISENIKNLVIVDSSVE 266
                           +++EPG +IV         V        +   +     +  +  
Sbjct: 280 RAAKAAFAARGMDVPVLWIEPGRSIVGPAGVTLYRVGSRKVIPGVRNYVAIDGGMTDNPR 339

Query: 267 AHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
             +     +   A    +       V G+ C +GD+          + GD ++      Y
Sbjct: 340 LALYGAKYHACYANRAADPPDRPWSVAGKCCESGDMLIWDLPLPDPQPGDLLAVFATGAY 399

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366
                + +N I  P +            R  ++ D    L
Sbjct: 400 TYAMASHYNRIPKPAVVFCRDGEARLVARRETWAD-VARL 438


>gi|212702772|ref|ZP_03310900.1| hypothetical protein DESPIG_00802 [Desulfovibrio piger ATCC 29098]
 gi|212673829|gb|EEB34312.1| hypothetical protein DESPIG_00802 [Desulfovibrio piger ATCC 29098]
          Length = 426

 Score =  209 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 57/393 (14%), Positives = 118/393 (30%), Gaps = 35/393 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ ++  L         +    G  +  ++K      +   + +      + S  E
Sbjct: 28  GTPLYVYNETVLRQRCRELKALSSLPGFGVNYSVKANTNPVLLRIIREEGLVVDAMSPGE 87

Query: 63  VML-GHEKFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           + +     F  +   Y +    + E+   + +   I  +++SQ+            K+ +
Sbjct: 88  LYMDQLAGFTADEILYISNNISEDELRNAVRHGVLISVDSLSQVETLGRV--NPGGKVMV 145

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174
           R NP +              ++ G   +        ++    ++ G+  H          
Sbjct: 146 RFNPGIGAGHHAKVVTAGKETKFGVSPELLDDLFAVLKKYDLHLAGINQHIGSLFMEADG 205

Query: 175 FSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----------RLKE 220
           + A  +      E+     +  +E I  GGG       Y  +               +  
Sbjct: 206 YIAAAEVLLHLAERLPADVLKNLEVIDFGGGFGIPYHKYEDQPRLDMDDLGRRLHGLISG 265

Query: 221 FSEK--YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQE 277
           ++EK  Y+ +  +EPG  +V     L  +V     N  +     D      V   +    
Sbjct: 266 WAEKTGYTGRFLVEPGRYVVAECGVLLGSVNATKTNGDRRYAGTDLGFNVLVRPAMYDSF 325

Query: 278 SATIYPNTGPY-------TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                   G            V G  C +GDI  +      +  GD +   D   Y    
Sbjct: 326 HDVEVYRKGAQGPDTETVEQSVVGNICESGDILAKNRQLPLLHEGDVLGVLDAGAYGFVM 385

Query: 331 KNWFNGINMPTIAVKNVDGTIK-AIREFSYNDY 362
            + +N        +   DG+++   R  +  D 
Sbjct: 386 SSSYNQRCRAAEILIQADGSVRLIRRRETLEDL 418


>gi|242373699|ref|ZP_04819273.1| diaminopimelate decarboxylase [Staphylococcus epidermidis
           M23864:W1]
 gi|242348667|gb|EES40269.1| diaminopimelate decarboxylase [Staphylococcus epidermidis
           M23864:W1]
          Length = 421

 Score =  209 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 64/394 (16%), Positives = 127/394 (32%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D+ ++   +       K +G+K  +  A K F    M   + +        S 
Sbjct: 26  GTPTIVYDEDQIRTQMRRYHEAFKKSGLKYNISYASKAFTCIQMVKLVQEEDLQLDVVSE 85

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    E  F      ++   K          +     + + + +++     A      
Sbjct: 86  GELYTALEAGFDASRIHFHGNNKTKREIQYALENGIGYFVIDALEEIDLIDKYASN-DVN 144

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168
           + +R+NP V           +  S+ G   K             S+   + G+ FH   +
Sbjct: 145 VVIRVNPGVEAHTHEFIQTGQEDSKFGLSIKHGLALEAVNKVKTSKHLQLKGVHFHIGSQ 204

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ--------RLKE 220
            +         K +         Q++ ++LGGG      +  V    +         +KE
Sbjct: 205 IEGTEAMIETAKIVLNWLSDNDIQVDLLNLGGGFGIKYVEEDVSFPIEEGIAEITDAIKE 264

Query: 221 FSEKYSVQIY---LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274
             +  + ++    +EPG +IV         V  I E  +    V     +  H+   L  
Sbjct: 265 TVQSLNYELPEIGIEPGRSIVGEAGITLYEVGTIKEIPEVNKYVSVDGGMSDHIRTALYD 324

Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331
             YQ            T  + G+ C +GDI  +       V+ GD ++      Y+ +  
Sbjct: 325 AKYQALLVNRHEEADDTVTIAGKLCESGDIIIKNAKLPSSVQRGDYLAILSTGAYHYSMA 384

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + +N +  P++         + I+  S      N
Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418


>gi|148827915|ref|YP_001292668.1| diaminopimelate decarboxylase [Haemophilus influenzae PittGG]
 gi|148719157|gb|ABR00285.1| diaminopimelate decarboxylase [Haemophilus influenzae PittGG]
          Length = 450

 Score =  209 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 57/366 (15%), Positives = 109/366 (29%), Gaps = 25/366 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +  G+ + + +   G    S  E
Sbjct: 26  GTPLYVYSRATLERHWHAFDSAFGKRPHLICFAVKSCSNIGVLNIMAKLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +              ++     ++  + A+          +VS+L      A        
Sbjct: 86  LERVLAAGGNASKVVFSGVAKSREEIMRALEVGIRCFNVESVSELKHINQIAGEMGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G    +  E            + G+  H   +  
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVNEAREVYKLASTLPNIKITGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F         + ++       ++ + LGGG+  T       +P       L++  +
Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGLGVTYTDETPPHPSDYANALLEKLKD 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
              ++I LEPG AI  N   L   V  +     +N  I D+ +   +   L       + 
Sbjct: 266 YPELEIILEPGRAISANAGILVAKVQYLKSNESRNFAITDTGMNDMIRPALYEAYMNIVE 325

Query: 283 PNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +           V G  C   D  G+      +  GD I+      Y  +  + +N   
Sbjct: 326 IDRTLAREKAIYDVVGPVCETSDFLGKQRELS-IAEGDYIAQCSAGAYGASMSSNYNSRA 384

Query: 339 MPTIAV 344
                 
Sbjct: 385 RTAEVF 390


>gi|282910980|ref|ZP_06318782.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282324675|gb|EFB54985.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|312438200|gb|ADQ77271.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           TCH60]
          Length = 421

 Score =  209 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 63/394 (15%), Positives = 125/394 (31%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D+ ++   +       K++G+K  +  A K F    M   + +        S 
Sbjct: 26  GTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTCLQMVKLVAEEDLQLDVVSE 85

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    E  F      ++   K          +N    + +++ ++      A    + 
Sbjct: 86  GELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVIDSLEEIELIDRYANDTVQV 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168
           + LR+NP V           +  S+ G   +            +S+   + G+  H   +
Sbjct: 146 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAIKAINKVQQSKYLKLKGVHCHIGSQ 204

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
            +    F    K + +       Q+E ++LGGG      +       +   +        
Sbjct: 205 IEGTEAFIETAKIVLRWLKEQDIQVELLNLGGGFGIKYVEGDESFPIESGIKDITDAIKS 264

Query: 229 IY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274
                        +EPG +IV         V  I E  +    V     +  H+   L  
Sbjct: 265 EIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKEIPEINKYVSIDGGMSDHIRTALYD 324

Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331
             YQ            +  + G+ C +GDI  +       VK GD ++      Y+ +  
Sbjct: 325 AKYQALLVNRNEEADDSVTIAGKLCESGDIIIKDAKLPSSVKRGDYLAILSTGAYHYSMA 384

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + +N +  P++         + I+  S      N
Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418


>gi|49483590|ref|YP_040814.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257425464|ref|ZP_05601889.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257428124|ref|ZP_05604522.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257430755|ref|ZP_05607137.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433515|ref|ZP_05609873.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257436356|ref|ZP_05612403.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           M876]
 gi|282903980|ref|ZP_06311868.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           C160]
 gi|282905745|ref|ZP_06313600.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282908716|ref|ZP_06316534.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282914188|ref|ZP_06321975.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           M899]
 gi|282919110|ref|ZP_06326845.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           C427]
 gi|283958162|ref|ZP_06375613.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293501215|ref|ZP_06667066.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293510176|ref|ZP_06668884.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           M809]
 gi|295427913|ref|ZP_06820545.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297591126|ref|ZP_06949764.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           MN8]
 gi|49241719|emb|CAG40409.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257271921|gb|EEV04059.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257274965|gb|EEV06452.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278883|gb|EEV09502.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281608|gb|EEV11745.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284638|gb|EEV14758.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           M876]
 gi|282316920|gb|EFB47294.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           C427]
 gi|282322256|gb|EFB52580.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           M899]
 gi|282326980|gb|EFB57275.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331037|gb|EFB60551.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282595598|gb|EFC00562.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           C160]
 gi|283790311|gb|EFC29128.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|291096220|gb|EFE26481.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291467120|gb|EFF09638.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           M809]
 gi|295128271|gb|EFG57905.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297576012|gb|EFH94728.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           MN8]
 gi|315195292|gb|EFU25679.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           CGS00]
          Length = 421

 Score =  209 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 63/394 (15%), Positives = 125/394 (31%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D+ ++   +       K++G+K  +  A K F    M   + +        S 
Sbjct: 26  GTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTCLQMVKLVAEEDLQLDVVSE 85

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    E  F      ++   K          +N    + +++ ++      A    + 
Sbjct: 86  GELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVIDSLEEIELIDRYANDTVQV 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168
           + LR+NP V           +  S+ G   +            +S+   + G+  H   +
Sbjct: 146 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAIKAINKVQQSKYLKLKGVHCHIGSQ 204

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
            +    F    K + +       Q+E ++LGGG      +       +   +        
Sbjct: 205 IEGTEAFIETAKIVLRWLKEQDIQVELLNLGGGFGIKYVEGDESFPIESGIKDITDAIKS 264

Query: 229 IY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274
                        +EPG +IV         V  I E  +    V     +  H+   L  
Sbjct: 265 EIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKEIPEINKYVSIDGGMSDHIRTALYD 324

Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331
             YQ            +  + G+ C +GDI  +       VK GD ++      Y+ +  
Sbjct: 325 AKYQALLVNRNEEADDSVTIAGKLCESGDIIIKDAKLPSSVKRGDYLAILSTGAYHYSMA 384

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + +N +  P++         + I+  S      N
Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418


>gi|148826629|ref|YP_001291382.1| diaminopimelate decarboxylase [Haemophilus influenzae PittEE]
 gi|148716789|gb|ABQ98999.1| diaminopimelate decarboxylase [Haemophilus influenzae PittEE]
          Length = 450

 Score =  209 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 57/366 (15%), Positives = 108/366 (29%), Gaps = 25/366 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +  G+ + + +   G    S  E
Sbjct: 26  GTPLYVYSRATLERHWHAFDSAFGKHPHLICFAVKSCSNIGVLNIMAKLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +              ++     ++  + A+          +VS+L      A        
Sbjct: 86  LERVLAAGGDASKVVFSGVAKSREEIMRALEVGIRCFNVESVSELKHINQIAGEMGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G    +  E            + G+  H   +  
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVNEAREVYKLASTLPNIKITGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
               F         + ++       ++ + LGGG+  T       +P       L++   
Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGLGVTYTDETPPHPSDYANALLEKLKN 265

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
              ++I LEPG AI  N   L   V  +     +N  I D+ +   +   L       + 
Sbjct: 266 YPELEIILEPGRAISANAGILVAKVQYLKSNESRNFAITDTGMNDMIRPALYEAYMNIVE 325

Query: 283 PNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +           V G  C   D  G+      +  GD I+      Y  +  + +N   
Sbjct: 326 IDRTLEREKAIYDVVGPVCETSDFLGKQRELS-IAEGDYIAQCSAGAYGASMSSNYNSRA 384

Query: 339 MPTIAV 344
                 
Sbjct: 385 RTAEVF 390


>gi|315638230|ref|ZP_07893412.1| diaminopimelate decarboxylase [Campylobacter upsaliensis JV21]
 gi|315481766|gb|EFU72388.1| diaminopimelate decarboxylase [Campylobacter upsaliensis JV21]
          Length = 408

 Score =  209 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 61/383 (15%), Positives = 122/383 (31%), Gaps = 21/383 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP+YL D   + +         K    ++  A+K  +   +   L +   G    S+ E
Sbjct: 17  KTPFYLYDFDLIKSRFLQLKNAFKARKSQIFYAMKANSNLSLLQMLARLDSGFDCVSIGE 76

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK----LHKK 117
           V              ++   K  E        D +  N  S+      +       L  +
Sbjct: 77  VKRALRVGVKPYKIIFSGVGKSEEELEQALKFDILYINLESEEEMLLLENVAKRLGLKAR 136

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCE-- 168
           I +R+NP+V              ++ G + +   +  +           G+ FH   +  
Sbjct: 137 ISIRVNPNVDAKTHPYISTGLNENKFGVELEVARKMYLYAAKSEFLEPVGVHFHIGSQLL 196

Query: 169 -NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224
                   + ++  + +E      ++++  +GGG+    +         + Q +      
Sbjct: 197 DISPIHDAALIVAKLLRELKALKIELKFFDVGGGLGVGYEGEEEPCLYHYAQGILANLSG 256

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP 283
             V I LEPG  +V  +  L  +VL      K   ++ D+++   +   L       + P
Sbjct: 257 LDVTIGLEPGRFLVAKSGVLVCSVLYEKITPKKRFMIVDAAMNDLIRPSLYDAYHEIVLP 316

Query: 284 NTGPY--TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
            T        V G  C +GD F +       K GD +  ++   Y  +  + +N      
Sbjct: 317 YTKGEVSPCDVVGGICESGDFFAKDRRLTKSKSGDIVLIKEAGAYGFSMSSNYNTRPRIC 376

Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364
                        +   + D   
Sbjct: 377 ELALENGAVKMVRKREKFEDLIA 399


>gi|297811305|ref|XP_002873536.1| hypothetical protein ARALYDRAFT_488028 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319373|gb|EFH49795.1| hypothetical protein ARALYDRAFT_488028 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 492

 Score =  209 bits (531), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 62/387 (16%), Positives = 123/387 (31%), Gaps = 27/387 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+YL  K ++  NL+      +     +  A+K      + + L     G    S  E+ 
Sbjct: 101 PFYLYSKPQITRNLEAYKEALEGVRSVIGYAIKANNNLKILEHLRSLGCGAVLVSGNELR 160

Query: 65  LG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKIGL 120
           L     F      +N       ++         +  ++   LN   + ++       + L
Sbjct: 161 LALRAGFDPTKCIFNGNGKLLEDLVLAAQEGVFVNVDSEFDLNNIVEASRISGKQVNVLL 220

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCENKSF 172
           RINP V              S+ G + +       +         + G   H        
Sbjct: 221 RINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDEVKAHPKELKLVGAHCHLGSTITKV 280

Query: 173 LCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSEK 224
             F      + +          ++ ++++GGG+               D    ++E    
Sbjct: 281 DIFRDAAVLMIEYIDEIRRQGFEVSYLNIGGGLGIDYYHAGAVLPTPMDLINTVRELVLS 340

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + + +EPG +++ NT      V  +  N  KN +++D S+   +   L          
Sbjct: 341 RDLNLIIEPGRSLIANTCCFVNHVTGVKTNGTKNFIVIDGSMAELIRPSLYDAYQHIELV 400

Query: 284 NTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
           +  P         V G  C + D  G+         G  +   D   Y ++  + +N   
Sbjct: 401 SPTPPEAEVSKFDVVGPVCESADFLGKDRELPTPPQGACLVVHDAGAYCMSMASTYNLKM 460

Query: 339 MPTIAVKNVDGTIKAIRE-FSYNDYYN 364
            P       DG+I  IR   +++D+  
Sbjct: 461 RPPEYWVEEDGSITKIRHAETFDDHLR 487


>gi|218245017|ref|YP_002370388.1| diaminopimelate decarboxylase [Cyanothece sp. PCC 8801]
 gi|257058041|ref|YP_003135929.1| diaminopimelate decarboxylase [Cyanothece sp. PCC 8802]
 gi|218165495|gb|ACK64232.1| diaminopimelate decarboxylase [Cyanothece sp. PCC 8801]
 gi|256588207|gb|ACU99093.1| diaminopimelate decarboxylase [Cyanothece sp. PCC 8802]
          Length = 474

 Score =  209 bits (531), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 51/405 (12%), Positives = 117/405 (28%), Gaps = 43/405 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG---VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P Y++D+  L                   +++ A K ++   +   +     G    S
Sbjct: 60  GSPLYVLDEATLRTACRQYREAFNTYYQGTSQVIYASKAWSCLAIVSIVASEGLGFDVVS 119

Query: 60  LYEV---MLGHEKFGG-------ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLN---K 106
             E+   +   E  G        + + +       E+   +    TII +   +L    K
Sbjct: 120 GGELHTTIKALEAMGWSTEQIAQQIYFHGNNKSHQELIFAIEIGCTIIVDNWLELETLVK 179

Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVN 159
             ++   L   I LR+ P +              S+ G              +    +  
Sbjct: 180 LGNQTGTLSIPILLRLTPGIECHTHEYIRTGHLDSKFGFDPNQLDAVFTYVSQQPTLDCR 239

Query: 160 GLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQ 216
           GL  H   +         +   + +           ++ +++GGG+     +       +
Sbjct: 240 GLHAHIGSQIFERQPHQDLGLVMVEWLKKAQNHGLVLQELNIGGGLGIRYVESDDPPSIE 299

Query: 217 RLKEFSEKYSVQ-----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS- 264
           +  +   +  ++           +  EPG ++V        T+    E  +    +    
Sbjct: 300 QWVKTVSESVMKACEIHQLPLPKLIAEPGRSLVGPACVTAYTIGSRKEIPQLRTYIAVDG 359

Query: 265 -VEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319
            +  +              A         T  + G+ C +GDI  +       + GD + 
Sbjct: 360 GMSDNPRPITYQSRYRTVVANRMSEPCTETVTIAGKHCESGDILIKDAQLPQTQPGDILV 419

Query: 320 FEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
                 YN +  + +N +  P   +         ++  +Y D   
Sbjct: 420 VMATGAYNHSMASNYNRLPRPAAVLVQEGEANLIVQRETYEDLLR 464


>gi|269219843|ref|ZP_06163697.1| diaminopimelate decarboxylase [Actinomyces sp. oral taxon 848 str.
           F0332]
 gi|269210748|gb|EEZ77088.1| diaminopimelate decarboxylase [Actinomyces sp. oral taxon 848 str.
           F0332]
          Length = 461

 Score =  209 bits (531), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 54/406 (13%), Positives = 111/406 (27%), Gaps = 44/406 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA-----GVKLLLALKCFAAWGMFDTLNQYMDGTTS 57
            TP Y++D+  L             A     G  +  A K F    +   +        +
Sbjct: 45  GTPLYVLDEDVLRARARAWKEAMDEAFSRLRGADVYYAGKAFLCVAVAKAVAHEGLAVDA 104

Query: 58  SSLYEVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK- 113
            S  E+         G     +     ++    A+ +     + +++++L      A+  
Sbjct: 105 CSEGELRTALAAGVPGSRIGMHGNNKSREEVELALRAEVGHFVVDSLAELEFVDSIARDE 164

Query: 114 -LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMF 163
                + LR+   V               + G            +  + +    + GL  
Sbjct: 165 GAVASVMLRVTTGVHAGGHEYMSTAVEDQKFGLSIASGAAWQAVEKTVNTPNLRLLGLHS 224

Query: 164 HNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF----- 214
           H   +      F      +L    +       ++  +  GGG                  
Sbjct: 225 HIGSQILVVEAFEEAARAVLDLRARVHREIGLELREVDFGGGYGIRYTGGDSAPPSPAQL 284

Query: 215 CQRLKEFSEKY-------SVQIYLEPGEAIVTNTTTLNTTVLDIS-----ENIKNLVIVD 262
              L      +         ++ +EPG  IV        TV  +      +  +  V VD
Sbjct: 285 ASALASVVASHSAESGIEPPRVSIEPGRNIVGPAGVTLYTVGTVKTVELEDGPRRYVSVD 344

Query: 263 SSVEAHVPDYLLYQESATI---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318
             +  ++   L               G   + V G+ C +GDI          +  GD +
Sbjct: 345 GGMSDNIRPALYDAAYTAALASREGEGRARSRVVGKHCESGDIVVRDVSLPEDLAAGDIL 404

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +      Y  +  + +N +  P +       +   +R  +  D   
Sbjct: 405 AVPATGAYGRSMASNYNHVPRPGVVAVRGGASRWIVRRETVEDLLA 450


>gi|78061687|ref|YP_371595.1| diaminopimelate decarboxylase [Burkholderia sp. 383]
 gi|77969572|gb|ABB10951.1| diaminopimelate decarboxylase [Burkholderia sp. 383]
          Length = 412

 Score =  209 bits (531), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 57/400 (14%), Positives = 120/400 (30%), Gaps = 46/400 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   + + +             +  A K  +   +   + +      + SL E
Sbjct: 16  GTPLWVYDADVIRDRIAQLRQFDV-----IRYAQKANSNIHILKLMREEGACVDAVSLGE 70

Query: 63  VMLGHEKF-----GGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHK 116
           +              E   +     D    A +  +  T+   ++  L +  + A     
Sbjct: 71  IERSLAAGFSPASEPEGVVFTADLIDRPTLAAVLKHGVTVNAGSLDMLARIGEHA--PGH 128

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170
           ++ LR+NP   +      +   P S+ G    D       +      + G+  H      
Sbjct: 129 RVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVRQYGLKLVGIHMHIGSGVD 188

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEF 221
            +   S +   +          I+ IS GGG+               Y  +    R +  
Sbjct: 189 -YGHLSQVCDAMVALVTSLGHDIDAISAGGGLSIPYRDGEPRVDVGHYFSQWDAARKRIE 247

Query: 222 SE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279
               + V+I +EPG  +V    TL T V  ++   K+  + +D+     +   +      
Sbjct: 248 RHLGHPVRIEIEPGRFLVAEAGTLVTEVQAVNRRPKHDFVLIDAGFNDLMRPSMYGSYHE 307

Query: 280 TIYPNTGP--------YTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324
                               + G  C +GD+F +              +IGD +   D  
Sbjct: 308 VSVHTHEGALLAGRPLVDLAIAGPLCESGDVFTQDAGGVVTHRKLAQPQIGDLLFLHDAG 367

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            Y  +  + +N   +    + +        R  + ++   
Sbjct: 368 AYGASMSSNYNSRPLAPEVLVDRSAPRLIRRRQTIDELLA 407


>gi|134298993|ref|YP_001112489.1| diaminopimelate decarboxylase [Desulfotomaculum reducens MI-1]
 gi|134051693|gb|ABO49664.1| diaminopimelate decarboxylase [Desulfotomaculum reducens MI-1]
          Length = 447

 Score =  209 bits (531), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 60/399 (15%), Positives = 125/399 (31%), Gaps = 36/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR-KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP Y+ID+     N         +  G +++ A K  +   +   + Q   G    S  
Sbjct: 30  GTPLYVIDEALFRQNCQNYYRSFTEEYGTEVIYASKTLSNLAICTIVEQEGLGLDVVSGG 89

Query: 62  EVM-LGHEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+      +F  E   ++      D    A+      I+ + + +L      A +   K 
Sbjct: 90  ELFTAAKARFPMERVYFHGNNKSPDELRLALDYKVGRIVVDNLYELELLNAIAGEKDTKA 149

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNC 167
              LR++P V           +  S+ G   +           +E     + G+  H   
Sbjct: 150 SIILRLSPGVEAHTHEYIKTGQIDSKFGLAIENGMAMSAVMRSLELSNILLKGIHCHIGS 209

Query: 168 ENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEF-- 221
           +      ++     M+  ++K F       E ++LGGG+     +       +   +   
Sbjct: 210 QIFELASYAHAAEVMMNFVQKIFQETGYLAEELNLGGGLGIYYSEGDYPRSVKEYADILM 269

Query: 222 ---------SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVP 270
                     +  + ++ +EPG +I   + T    +  I +       V     +  +  
Sbjct: 270 SAVRAKAAEFDIPAPKVIVEPGRSISGPSGTTLYRIGAIKDIPGIRKYVSVDGGMSDNPR 329

Query: 271 DYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
             L   +     A            + G+ C +GD+         +  GD ++      Y
Sbjct: 330 PALYKSKYEACLANRVNEEPIEQVSIAGKCCESGDMLIWDIKLPVITTGDILAISCTGAY 389

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           N +    +N +  P + +         ++   Y D   N
Sbjct: 390 NYSMSMNYNRLPRPAMVLVCEGKADLIVKREDYADIIRN 428


>gi|325971325|ref|YP_004247516.1| carboxynorspermidine decarboxylase [Spirochaeta sp. Buddy]
 gi|324026563|gb|ADY13322.1| carboxynorspermidine decarboxylase [Spirochaeta sp. Buddy]
          Length = 371

 Score =  208 bits (530), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 120/368 (32%), Positives = 177/368 (48%), Gaps = 10/368 (2%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP ++++ + L  NL     ++    VK L ALK FA   +F  L     G T SSL E 
Sbjct: 10  TPAFVLEYEALQKNLALIKQLQDQVPVKFLFALKGFAMHSVFPELAASACGATISSLNEA 69

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +L    F  E HAY   Y+D E + +      I FN++++  K            GLRIN
Sbjct: 70  LLASPYF-SEVHAYAPVYQDREFETIARIAKHITFNSLNEYEKHTK--DCPRASKGLRIN 126

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
           P  S  +  L DP    SRLG      + +  + ++GL  HN CE+ +       L +IE
Sbjct: 127 PLYSAVETELYDPCAIGSRLGV-LPQALPTLPEGLSGLHSHNLCESTAHD-LEQTLVSIE 184

Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNTT 242
           K +GH +  I W++LGGG   T K Y ++ F   L  F  ++   Q+YLEPG A V  T 
Sbjct: 185 KHYGHLLPSISWLNLGGGHLVTKKGYDLELFKAVLSSFCMRHPHIQLYLEPGAAFVWETG 244

Query: 243 TLNTTVLDISENIKNLVIVDSSVEA-HVPDYLLYQESATIYPNTGPYT--AMVCGRSCLA 299
            L T +LDI +N     ++  +  A H+PD L    +  +            + G SCLA
Sbjct: 245 YLATRILDIVQNQGITTLMLDTSFATHMPDCLEMPYAPQVVGAEIVQEGGYRLGGCSCLA 304

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD  G + F+K  K+GD +   D+  Y + +   FNGI +  I +   DG  + ++ FS+
Sbjct: 305 GDWVGSYRFKKQPKVGDTLLLCDMMHYTMVKTTMFNGIALADIGMVR-DGLYQIVKTFSF 363

Query: 360 NDYYNNLS 367
           +DY   LS
Sbjct: 364 DDYQRRLS 371


>gi|310828105|ref|YP_003960462.1| hypothetical protein ELI_2517 [Eubacterium limosum KIST612]
 gi|308739839|gb|ADO37499.1| hypothetical protein ELI_2517 [Eubacterium limosum KIST612]
          Length = 425

 Score =  208 bits (530), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 63/398 (15%), Positives = 127/398 (31%), Gaps = 36/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++ +  L  N++      ++AG    +  A K F   GM   +         +S 
Sbjct: 20  GTPLYVMSEDILRANINRIKDAFESAGAVYDVNYAGKTFLNMGMCRIIESEGISLDVASG 79

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNC--DTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F      ++ + K+     +        I+ ++  +L + +   ++L + 
Sbjct: 80  GELYTAVKSGFNPARICFHGSNKNQAELEMALGYKVGRIVIDSEWELERLQLLTEELEQP 139

Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCE 168
           +    R++P +      L    +  S+ G       E              G+  H   +
Sbjct: 140 VKVLFRVSPGIEAHTHELIQTGKLDSKFGLPLSQAREIIGRTKEMNYVETAGIHCHIGSQ 199

Query: 169 NKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYP-----------VKDF 214
                 F    + +   +         +  I+LGGG                    + D 
Sbjct: 200 IADEKPFLLASEVMLDLYKALLSDGLNLTEINLGGGFGIPYLKEDPSFDVTSYIPKMVDH 259

Query: 215 CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDY 272
            + + E  E    +I +EPG ++         TV  + E    K  V VD  +  +    
Sbjct: 260 MREMAEQREVPMPKIVVEPGRSVAAPAGITLYTVGTVKEIPGLKKYVSVDGGMADNPRPA 319

Query: 273 LLYQESATIYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
           L   +   +  N            V G++C   D   +       + GD ++      YN
Sbjct: 320 LYGADYDAVICNKPQDEALMEEVTVSGKACET-DTLIKSIKLPSPQSGDTLAVLHTGAYN 378

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            +  + +N    P + +   D +   +   S+ D   N
Sbjct: 379 YSMASNYNRFRRPAVILLKGDQSAVLVERESFEDLVKN 416


>gi|154500726|ref|ZP_02038764.1| hypothetical protein BACCAP_04404 [Bacteroides capillosus ATCC
           29799]
 gi|150270615|gb|EDM97924.1| hypothetical protein BACCAP_04404 [Bacteroides capillosus ATCC
           29799]
          Length = 418

 Score =  208 bits (530), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 66/398 (16%), Positives = 121/398 (30%), Gaps = 34/398 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +  N          N G K   A+K      +   L++   GT  SSL 
Sbjct: 19  PTPFHLYDEKGIRENARKLKAAFAWNPGFKEYFAVKATPNPTILKILHEEGCGTDCSSLT 78

Query: 62  EVMLG-HEKFGGETHAYNVAYKDCEIDA-VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+M+     F G    ++      E  A       TI  +  + ++  K+    + + I 
Sbjct: 79  ELMMSDRCGFKGSEIMFSSNDTPAEEFALAAKLGATINLDDFTHIDFLKETIGYIPETIS 138

Query: 120 LRINPSV-----SYSKFILADPNRPFSRLGEKCKDKIE---------SEIKNVN-GLMFH 164
            R NP          +      N   ++ G   +   E         ++   ++  L  +
Sbjct: 139 CRFNPGGTFSIGESKEGFQVMDNPGEAKYGFTREQLFEGFKKLKAMGAKHFGIHAFLASN 198

Query: 165 NNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                        + +            I +I+L GG+    +     +    + E   K
Sbjct: 199 TLSNEYYPTLAGILFQLAVDLKKETGCDIRFINLSGGVGVPYRPEQPANDIAVIGEGVRK 258

Query: 225 YSVQI-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL 273
               I           + E G  ++     L T         K  V VD+     +   +
Sbjct: 259 QYEAILTPAGMGDVAIFTELGRFMLAPYGCLVTKATHFKHTYKEYVGVDACAANLMRPAM 318

Query: 274 LYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
                             +   V G  C   D F        + +GD +   D   +   
Sbjct: 319 YGAYHHITVMGKEDAPCDHKYDVTGSLCENNDKFAVDRMLPEIDLGDLLVIHDTGAHGFA 378

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
               +NG       +   DG+ + IR   + +DY+  L
Sbjct: 379 MGYNYNGRLRSAEVLLKEDGSTELIRRAETPDDYFATL 416


>gi|328957339|ref|YP_004374725.1| diaminopimelate decarboxylase [Carnobacterium sp. 17-4]
 gi|328673663|gb|AEB29709.1| diaminopimelate decarboxylase [Carnobacterium sp. 17-4]
          Length = 438

 Score =  208 bits (530), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 63/399 (15%), Positives = 134/399 (33%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D  ++     T     ++  +K  +  A K F+   ++  + +        S 
Sbjct: 33  GTPVYVYDISQIKYKARTFKKAFQDRNIKAQVAYASKAFSCLAVYQLMAKEEMSLDVVSG 92

Query: 61  YEVMLG--HEKFGGETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+      E    + H +     D EI A    +    + +   +L+K  +  ++  +K
Sbjct: 93  GELFTAIQAEYPNKKIHFHGNNKSDSEIIAALDYDIGCFVVDNFYELSKLNEYTKQRQQK 152

Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
           +   LR+ P V           +  S+ G   ++          +E    +V GL  H  
Sbjct: 153 VSVLLRVTPGVEAHTHEYITTGQTDSKFGFDLENGQAQQALEMSLEMPYIDVMGLHCHIG 212

Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFCQ------ 216
            +      FS  +  +  +   +      Q+  +++GGG              +      
Sbjct: 213 SQIFETDGFSLAIDKLMIQSKEWQVLFDFQLRVLNVGGGFGIRYTSEDEPLPIEDYVNNL 272

Query: 217 -----RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHV 269
                 + E  +    +I++EPG ++V +       V    +  +++N + +D  +  ++
Sbjct: 273 IDEVQSVSEKIQLPMPEIWIEPGRSLVGDAGITLYQVGSQKLIPDVRNYLAIDGGMTDNI 332

Query: 270 PDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +     A    +    T  + G+ C +GD+             D ++      
Sbjct: 333 RPALYDAKYTGVLANRVADAVEETYSIAGKCCESGDMLIWDLPLPKADATDILAVFSTGA 392

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y     + +N I  P +          AI+  SY D   
Sbjct: 393 YGYAMASNYNRIPRPPVVFVENGKDFLAIKRESYADLMR 431


>gi|326332897|ref|ZP_08199154.1| diaminopimelate decarboxylase [Nocardioidaceae bacterium Broad-1]
 gi|325949255|gb|EGD41338.1| diaminopimelate decarboxylase [Nocardioidaceae bacterium Broad-1]
          Length = 462

 Score =  208 bits (530), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 64/403 (15%), Positives = 119/403 (29%), Gaps = 42/403 (10%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y++D+                 G  +  A K F    +   + Q        S  
Sbjct: 58  INTPAYVLDEVDFRERARAFRDAF--TGYDVYYAGKAFLCTEVARWVAQEGLCLDVCSDG 115

Query: 62  EVMLG-HEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+ +    +       Y+   K       A+++    II ++  ++ +    A +     
Sbjct: 116 ELSVALRAEVDPAKIGYHGNNKTPMELRRAIVAGVGRIIVDSFVEVERVSAIAAETGITA 175

Query: 119 GLRINP--SVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNC 167
            + +     V               + G         E  +  + +    + GL  H   
Sbjct: 176 RVMVRVTAGVEAHTHEYIATAHEDQKFGFSISSGDAFEAVRRLLAAPNVELRGLHSHIGS 235

Query: 168 EN----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223
           +        +    +L    +      T++  + LGGG              + L E   
Sbjct: 236 QIFDSSGFEVAARRVLALQARIRDELGTELPEMDLGGGFGIAYTTQDDPSTPKALAEELT 295

Query: 224 KYSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI------KNLVIVDSSVE 266
                             +EPG AIV  +     TV  + E        +  V VD  + 
Sbjct: 296 AIVEHECRGFGLAVPHLSIEPGRAIVGPSMCTVYTVGTVKEVALDGGVARTYVSVDGGMS 355

Query: 267 AHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFE 321
            ++   L   +     A    + GP    V G+ C AGDI  +  F    +  GD I+  
Sbjct: 356 DNIRTALYDADYSATLAGRASSAGPVLGRVVGKHCEAGDIVVKHEFLPADIAPGDLIAVP 415

Query: 322 DVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
               Y  +  + +N    P +       +   +R  +  D + 
Sbjct: 416 GTGAYGRSMASNYNHALRPPVVAVRDGESRVIVRRETEADLFA 458


>gi|255543757|ref|XP_002512941.1| diaminopimelate decarboxylase, putative [Ricinus communis]
 gi|223547952|gb|EEF49444.1| diaminopimelate decarboxylase, putative [Ricinus communis]
          Length = 488

 Score =  208 bits (530), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 62/384 (16%), Positives = 126/384 (32%), Gaps = 27/384 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+YL  K ++  N++      +     +  A+K    + + + L Q   G    S  E+ 
Sbjct: 97  PFYLYSKPQITRNVEAYKSALEGLNSIIGYAIKANNNFKILEHLRQLGCGAVLVSGNELR 156

Query: 65  LG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGL 120
           L     +  +   +N       ++         +  ++   L      ++       + L
Sbjct: 157 LALRAGYDPKKCIFNGNGKLLEDLVLAAEEGVFVNVDSEFDLENIVAASRIAGEKINVLL 216

Query: 121 RINPSVSYSKFILADPNRPFSRLGE------KCKDKIESEIKNVN--GLMFHNNCENKSF 172
           RINP V              S+ G          D +++    +   G   H        
Sbjct: 217 RINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKV 276

Query: 173 LCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSEK 224
             F      +            +I+++++GGG+              +D    ++E    
Sbjct: 277 DIFRDAAVLMVNYIDEIRAQGFEIDYLNIGGGLGIDYYHAGAVLPTPRDLIDTVRELVLS 336

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283
            ++ + +EPG +++ NT  L   V  +  N  KN +++D S+   +   L          
Sbjct: 337 RNLNLIIEPGRSLIANTCCLVNRVTGVKTNGTKNFIVIDGSMAELIRPSLYDAYQHIELV 396

Query: 284 NTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
           +         T  V G  C + D  G+         G  +   D   Y ++  + +N   
Sbjct: 397 SPAQPIVEVSTFDVVGPVCESADFLGKGRELPTPSKGAGLVVHDAGAYCMSMASTYNLKM 456

Query: 339 MPTIAVKNVDGTIKAIRE-FSYND 361
            P       DG++  IR   ++ D
Sbjct: 457 RPPEYWIEEDGSVTKIRHGETFED 480


>gi|121535393|ref|ZP_01667204.1| Orn/DAP/Arg decarboxylase 2 [Thermosinus carboxydivorans Nor1]
 gi|121305992|gb|EAX46923.1| Orn/DAP/Arg decarboxylase 2 [Thermosinus carboxydivorans Nor1]
          Length = 428

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 68/393 (17%), Positives = 120/393 (30%), Gaps = 30/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           KTP+++ D++ +  N            G K   A+K      +   L +   G   SS+ 
Sbjct: 21  KTPFHIYDEKGIRENARKLTAAFAWAPGFKEYFAVKATPNPYILQILREEGFGADCSSMA 80

Query: 62  EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E++L       GE   ++       E          I  + +S +   +  A      I 
Sbjct: 81  ELVLAEMVGITGEEIIFSSNDTPAEEYVKAKQLGAIINLDDISHIEFLEKHAGLPEI-IS 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFHNN------CEN 169
            R NP     +          ++ G   +   ++      K V     H           
Sbjct: 140 FRYNPGPLLKQGNTIIGKPEEAKYGLTRQQIFDAYRIVQAKGVKRFGLHTMVISNELNPQ 199

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK----- 224
                 + M     + +     ++E+I LGGGI    +          + E   K     
Sbjct: 200 CFVETANMMFDLAIEIYQKLGIKVEFIDLGGGIGIPYRPEQQPVDLFYVGEEIRKAYEAK 259

Query: 225 ------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                 + +++ +E G  I      L   VL   E  KN V +D+ +   +   +     
Sbjct: 260 IVANGLHPIKLAMECGRMITGPYGYLVARVLHKKEIYKNYVGLDACMANLMRPGMYGAYH 319

Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                    +       V G  C   D F        + IGD +   D   +       +
Sbjct: 320 HITVAGKEDWPLDHIYDVTGSLCENNDKFAIDRPLPRIDIGDIVVIHDTGAHGHAMGFNY 379

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       +   DG++K IR   +  D +  L
Sbjct: 380 NGKLRSAELLLRPDGSVKLIRRAETLADLFATL 412


>gi|226360613|ref|YP_002778391.1| diaminopimelate decarboxylase [Rhodococcus opacus B4]
 gi|226239098|dbj|BAH49446.1| diaminopimelate decarboxylase [Rhodococcus opacus B4]
          Length = 473

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 58/406 (14%), Positives = 119/406 (29%), Gaps = 45/406 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +++D+    +              K+  A K F    +   +         +S  E
Sbjct: 64  GTPLFVVDEDDFRSRCRDMARAF-GPAAKVHYASKAFLCGEIARWVADEGLSLDVASGGE 122

Query: 63  VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F     A +   K       AV +    I+ ++ +++++    A +    + 
Sbjct: 123 LAVALHAGFPAGRIAMHGNNKSVAELNAAVSAGVGHIVLDSATEIDRLDKVAAEAGVVQD 182

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G         +  +    ++   + GL  H   +
Sbjct: 183 VLIRVTVGVEAHTHEFISTAHEDQKFGFSLAGGKAIDAVRRVFAADNLRLVGLHSHIGSQ 242

Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F          +      F       I  I LGGG+  +           +L  
Sbjct: 243 IFDVDGFEVAAHRVIGLLRDVVAEFGVDKTAQISIIDLGGGMGISYVPTDDPPPVDQLAA 302

Query: 221 FSEKYSVQ-----------IYLEPGEAIVTNTTTLNTTVLDIS------ENIKNLVIVDS 263
                              + +EPG AI    T     V  I          +  V VD 
Sbjct: 303 KLGDIVRHESALAGLPEPTLAVEPGRAIAGPGTVTLYEVGTIKDVTVGSNLTRRYVSVDG 362

Query: 264 SVEAHVPDYLLYQESA----TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318
            +  ++   L   E      +   +  P  + V G+ C +GDI     +    +  GD +
Sbjct: 363 GMSDNIRTALYQAEYEAKLVSRVSDAAPVVSRVVGKHCESGDIVIRDTWMPEDIDAGDLL 422

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +      Y  +  + +N +  P +       +   +R  +  D  +
Sbjct: 423 AVAATGAYCYSMSSRYNLLARPAVVAVRDGQSRVILRRETVEDLLS 468


>gi|227512608|ref|ZP_03942657.1| diaminopimelate decarboxylase [Lactobacillus buchneri ATCC 11577]
 gi|227084073|gb|EEI19385.1| diaminopimelate decarboxylase [Lactobacillus buchneri ATCC 11577]
          Length = 435

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 65/399 (16%), Positives = 125/399 (31%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           KTP  + D   + N +     + ++  V   +  A K FA   MF  +NQ        S 
Sbjct: 31  KTPLVVYDVSSIRNQIHHFQKVFEDNHVDYAVSYASKAFACIAMFQLVNQENAHIDVVSG 90

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK--LH 115
            E+       F  +  +++   K  E   +        II +   ++   K   +    H
Sbjct: 91  GELYTAIKAGFPMDHVSFHGNNKSVEELEMAVDHQIGVIILDNFHEIALLKQILKDKDAH 150

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
             + LR+ P VS          +  S+ G             + +  +   + G+  H  
Sbjct: 151 INVMLRVTPGVSAHTHEYDQTGQTDSKFGFDLQSGQARKALDEVLADQRMTMLGIHAHIG 210

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQI----EWISLGGGIHFTDKDYPVKD--------F 214
            +      F      +    G +  +I    + +++GGG      +              
Sbjct: 211 SQIFEVKGFELAATKLIDTLGQWHKEIGYVAKVVNVGGGFGIRYTEEDDPIAPEMFVDAI 270

Query: 215 CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            + +K+ + +       +++EPG +I         TV    +       V     +  ++
Sbjct: 271 VKAIKKRARELALPMPAVWIEPGRSIAGPAGYNLYTVGSRKDVPGIRSYVTVDGGMGDNI 330

Query: 270 PDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   E   +  N        T  V G+ C +GDI  +       K GD ++      
Sbjct: 331 RPALYQAEYDAVLANDPKAPAKETVRVAGKYCESGDILIQKQALPQTKPGDVLAMLATGA 390

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y     + +N    P +           IR  ++ D   
Sbjct: 391 YGYAMASNYNRNPRPAVIFAENGQDNLVIRRETFEDLIR 429


>gi|330718569|ref|ZP_08313169.1| diaminopimelate decarboxylase [Leuconostoc fallax KCTC 3537]
          Length = 435

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 66/398 (16%), Positives = 126/398 (31%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP    D  K+ + +     + +   V   +  A K F+A GM++ + Q    T   S 
Sbjct: 31  GTPLVAYDVSKIRSQIKAFKRVFEEKQVPYAVSYASKAFSAIGMYEVVAQEGGHTDVVSG 90

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDK--AQKLH 115
            E+    +  F  E  ++N   K  +   +  +     II +   +++  +     +   
Sbjct: 91  GELYTALQANFPVEDISFNGNNKSYDELVMAIDAGIGAIIVDNFHEIDLIEQILSTRSTS 150

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
             + LRI P +S          +  S+ G            +  +++   N+ G+  H  
Sbjct: 151 VNVLLRITPGISAHTHEFISTGQEDSKFGFDLKSGQARVAFERVMKNSKINMRGVHAHIG 210

Query: 167 CENKSFLCFSAMLKN----IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---- 218
            +      F A  +     +      F  ++E I++GGG              +      
Sbjct: 211 SQIFDVHGFVAAAEKLVDIVADWRESFGYEVEVINVGGGFGIRYTKDDTPIPAESFVAAI 270

Query: 219 -------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269
                   E       +I++EPG ++V        T+    +         VD  +  ++
Sbjct: 271 IDAVKAKTEALNMKMPEIWIEPGRSVVGPAGYSLYTIGSRKDIPGINAYLAVDGGMGDNI 330

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   E   +              + G+ C +GDI          K GD I+      
Sbjct: 331 RPALYQAEYEALLASNVNAKSEEVVRIAGKYCESGDILVWQQALPQTKPGDVIAILATGA 390

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
           Y     + +N    P +           I   SY+D  
Sbjct: 391 YGYAMASNYNRNPKPAVVFVEDGQAKLVIARESYDDLV 428


>gi|296111895|ref|YP_003622277.1| diaminopimelate decarboxylase [Leuconostoc kimchii IMSNU 11154]
 gi|295833427|gb|ADG41308.1| diaminopimelate decarboxylase [Leuconostoc kimchii IMSNU 11154]
          Length = 433

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 66/393 (16%), Positives = 120/393 (30%), Gaps = 33/393 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D  K+   +     I +  GV   +  A K FA   ++    Q        S 
Sbjct: 26  GTPLYVYDVTKIRQTMRAFKTIFEKEGVPYVVSYASKAFATQAIYQVAQQEGIHADIVSG 85

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F  +  ++N   K  +    A+ +    II +   +L    + A    + 
Sbjct: 86  GELFTALQAGFDPKHLSFNGNNKSWDELTMAIEAGVGMIIVDNFLELQLLSEIAAKHNMT 145

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
           + I LRI+P +S          +  S+ G                + +  N+ GL  H  
Sbjct: 146 QDILLRISPGISAHTHEFISTGQQDSKFGFDLLTGQGKQAYDIAKDDQNLNLLGLHAHIG 205

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK----DFCQRLKEFS 222
            +      F      +      +  Q   I++GGG      D        D+   +    
Sbjct: 206 SQIFDVTGFEKNAALLADTAQSWGWQPAIINVGGGFGIRYTDEDTPLPESDYADAIIRTL 265

Query: 223 -------EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDYL 273
                  +    +I++EPG ++V        TV    +         VD  +  ++   L
Sbjct: 266 KSKAAQYDWKMPEIWIEPGRSVVGPAGQTLYTVGSRKDIPDLRQYLAVDGGMGDNIRPAL 325

Query: 274 LYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
                    A            V G+ C +GD+          + GD +S      Y   
Sbjct: 326 YQANYDAVLANQPNAPTEEVVRVAGKYCESGDVLVWQQALPRTQPGDILSVLATGAYGYA 385

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
             + +N    P +           +   +Y + 
Sbjct: 386 MASNYNRNPRPGVVFVENGQHQLVVARETYANL 418


>gi|298694694|gb|ADI97916.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           ED133]
          Length = 421

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 63/394 (15%), Positives = 124/394 (31%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D+ ++   +       K++G+K  +  A K F    M   + +        S 
Sbjct: 26  GTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTCIQMVKLVAEEDLQLDIVSE 85

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    E  F      ++   K          +N    + +++ ++      A    + 
Sbjct: 86  GELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVIDSLEEIELIDRYANDTVQV 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + LR+NP V           +  S+ G                +S+   + G+  H   +
Sbjct: 146 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAKKAIDKVQQSKYLKLKGVHCHIGSQ 204

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
            +    F    K + +       Q+E ++LGGG      +       +   +        
Sbjct: 205 IEGTEAFIETAKIVLRWLKEQDIQVELLNLGGGFGIKYVEGDESFPIESGIKDITDAIKS 264

Query: 229 IY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274
                        +EPG +IV         V  I E  +    V     +  H+   L  
Sbjct: 265 EIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKEIPEINKYVSIDGGMSDHIRTALYD 324

Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331
             YQ            +  + G+ C +GDI  +       VK GD ++      Y+ +  
Sbjct: 325 AKYQALLVNRNEKADDSVTIAGKLCESGDIIIKDAKLPSSVKRGDYLAILSTGAYHYSMA 384

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + +N +  P++         + I+  S      N
Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418


>gi|17230489|ref|NP_487037.1| diaminopimelate decarboxylase [Nostoc sp. PCC 7120]
 gi|17132091|dbj|BAB74696.1| diaminopimelate decarboxylase [Nostoc sp. PCC 7120]
          Length = 464

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 54/395 (13%), Positives = 113/395 (28%), Gaps = 33/395 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P Y++D++ L           +       ++L A K +    +         G    S
Sbjct: 61  GSPLYILDEETLRTACQQYRDGFQKYYPGESQVLYASKAWNCLAVCAIAASEGLGIDVVS 120

Query: 60  LYEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             E+           + + +       E+   + +  TI+ +   +L      A      
Sbjct: 121 GGELYTALAAGVSPAKIYLHGNNKSREELVLAIESGVTIVADNWYELRILASLADSEEPI 180

Query: 118 IG-LRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCEN 169
              LR+ P +              S+ G    D         +    N  GL  H   + 
Sbjct: 181 RLMLRLTPGIECHTHEYIRTGHLDSKFGFDPNDLAEVFEFVSQQPNLNCVGLHAHIGSQI 240

Query: 170 KSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTD-KDYPVKDFCQRLKEFSEKY 225
                   +   + +       +   +  +++GGG+     +        + +K   E  
Sbjct: 241 FERQPHRDLAAVMVQWLRDANKYGLNVTELNVGGGLGIKYVESDDPPSIDEWVKAICEVV 300

Query: 226 SVQIYLE----------PGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDYL 273
                 E          PG +++  +     TV        I+  V +D  +  +     
Sbjct: 301 QAACAAENLPLPKLLSEPGRSLIATSCITAYTVGSSKTIPEIRTYVSIDGGMSDNPRPIT 360

Query: 274 LYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
                  +  N        T  + G+ C +GDI  +       + GD +       YN +
Sbjct: 361 YQSVYRAVIANKLSAPHTETVTIAGKHCESGDILIKNAQLPKTEPGDILVVMATGAYNYS 420

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             + +N +  P   V         ++  +Y D   
Sbjct: 421 MASNYNRLPRPAAVVVANGEANLILQRETYQDLIR 455


>gi|28378400|ref|NP_785292.1| diaminopimelate decarboxylase [Lactobacillus plantarum WCFS1]
 gi|300767341|ref|ZP_07077253.1| diaminopimelate decarboxylase [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|308180552|ref|YP_003924680.1| diaminopimelate decarboxylase [Lactobacillus plantarum subsp.
           plantarum ST-III]
 gi|28271235|emb|CAD64140.1| diaminopimelate decarboxylase [Lactobacillus plantarum WCFS1]
 gi|300495160|gb|EFK30316.1| diaminopimelate decarboxylase [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|308046043|gb|ADN98586.1| diaminopimelate decarboxylase [Lactobacillus plantarum subsp.
           plantarum ST-III]
          Length = 441

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 58/399 (14%), Positives = 129/399 (32%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           +TP Y+ D   +   +     + +      ++  A K FA   M+  + Q        S 
Sbjct: 31  QTPLYVYDTGAIRAEIAAFKQVFEENHVDYQISYASKAFATVAMYQLIAQEHIHCDVVSG 90

Query: 61  YEVMLGHEK-FGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    +  F     +++   K       A+ +   TI+ +   +L +      +  + 
Sbjct: 91  GELYTAQQADFPMAAVSFHGNNKSLAELTMALDAGVGTIVVDNFGELRQLTTLTTQRQQP 150

Query: 118 IGLR--INPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             +   I P +S          +  S+ G         +  K    +    + G+  H  
Sbjct: 151 TTIMLRIAPGISAHTHDYISTGQADSKFGFDLDSGQADQAIKAAQAAPYLKLVGIHCHIG 210

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEW----ISLGGGIHFTDKDYPVK-----DFCQR 217
            +      F  ++  +  EF  +  ++++    +++GGG                     
Sbjct: 211 SQIFEVNGFEMIVDKLVSEFARWQRELDFYPQIMNVGGGFGVKYTAEDHPLQPTDFVDAI 270

Query: 218 LKEFSEKY------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269
           +KE   +        ++I++EPG ++V        T+ D  +         VD  +  ++
Sbjct: 271 IKETRAQTAAQQVPMLEIWIEPGRSLVATAGMTLYTIGDEKDIPGIRKYLSVDGGMGDNI 330

Query: 270 PDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   +            A + G+ C +GD+            GD ++  D   
Sbjct: 331 RPALYQAKYEAVLAKNPALPAEQVASIAGKYCESGDMLIWNQQLPATAPGDVLAVLDTGA 390

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  + +N    P +       +   ++  SY D   
Sbjct: 391 YGYSMASNYNRNPRPAVVFCEQGHSQLVVQRESYADLTR 429


>gi|320012818|gb|ADW07668.1| diaminopimelate decarboxylase [Streptomyces flavogriseus ATCC
           33331]
          Length = 444

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 61/397 (15%), Positives = 118/397 (29%), Gaps = 36/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+ ++     T   +       +L A K F +  M   +++   G  + S  E
Sbjct: 46  DTPAYVLDEGEVRARCRTYRAVF--PDADVLYAAKAFLSRAMVRWIDEEGLGLDACSAGE 103

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL-HKKI 118
           + L     F       +   K               I+ ++ S++ +   +      +K+
Sbjct: 104 LELAVMAGFPAARIVLHGNAKSPRDIETALRLGVGRIVVDSPSEIARLAAQVGSGGRQKV 163

Query: 119 GLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCEN 169
            +R+ P VS              + G               +      + GL  H   + 
Sbjct: 164 MVRVVPGVSAGGHEKIRTGTDGQKFGLSLTDGSAQHAIARVLGQPQLELTGLHCHIGSQI 223

Query: 170 KSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEF 221
                +      M+  + +           + +GGG             +    +RL   
Sbjct: 224 TDVKPYLVAVRRMVGLMARIKESHGVTFPELDMGGGHGVAYRAGESALDLTALARRLNGE 283

Query: 222 SEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYL 273
                        ++ +EPG A+          VL +        V VD  +  +    L
Sbjct: 284 LSASCAAAGLPVPRLVIEPGRAVAAPAGVAVYRVLAVKPTGSTMFVAVDGGMSDNPRPAL 343

Query: 274 LYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNI 328
                A           P    V GR C AGDI          V+ GD ++      Y +
Sbjct: 344 YGARYAPRLVGRSTTAEPVATTVVGRHCEAGDILAADVLLPGDVRPGDLLAVPVSGAYQL 403

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           +  + +N +  P +   +       +R  +  D+   
Sbjct: 404 SMASDYNLVGRPPVVAVHDGSARLLVRRETQEDFRRR 440


>gi|303228963|ref|ZP_07315773.1| putative diaminopimelate decarboxylase [Veillonella atypica
           ACS-134-V-Col7a]
 gi|302516377|gb|EFL58309.1| putative diaminopimelate decarboxylase [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 418

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 66/393 (16%), Positives = 123/393 (31%), Gaps = 29/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+++ D++ ++NN+   +     N G K   A+K      +   L +   G   SSL 
Sbjct: 21  PTPFHIYDEEGIVNNMKRFISAFSWNKGFKQYFAVKATPNPYIMRVLQKLGVGADCSSLA 80

Query: 62  EVMLG-HEKFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E++L       G    +        E    L     I  + ++ +   +     L     
Sbjct: 81  ELLLCEKVGITGHDIMFTSNDTPYVEYKKALDMGAIINLDDITHIEYLEKHHGSLPDTFC 140

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVNGLMFHNNCENKSFLC- 174
           +R NP                ++ G   +   E+  +     V     H    +      
Sbjct: 141 VRYNPGPLKEGGNTIIGLPEEAKYGMTREQVFEAYKQLQAKGVKHFGLHTMVVSNELDID 200

Query: 175 -----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
                         +        +E+I LGGG+    K        ++L E   +   +I
Sbjct: 201 GLVGTAEICFNLAVEIKEKLGIDVEFIDLGGGVGVAYKPEQTPVDFEKLGERVHEAYDRI 260

Query: 230 Y-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                        E G  +      L +T +   +  ++ + +DS +   +   L     
Sbjct: 261 IKGNGLKDIALAYECGRMVTGPFGYLVSTAIHKKDIYRHYIGLDSCMANLMRPALYGSYH 320

Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        + IGDRI   D   +  +    +
Sbjct: 321 HITVMGKENAPKDHVYDVTGSLCENNDKFAIQRELPKIDIGDRIIIHDAGAHGHSMGFNY 380

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       + + DG++  IR   +Y+D +  L
Sbjct: 381 NGKLRSAELLLHKDGSVTQIRRAETYDDLFGTL 413


>gi|303232009|ref|ZP_07318715.1| putative diaminopimelate decarboxylase [Veillonella atypica
           ACS-049-V-Sch6]
 gi|302513339|gb|EFL55375.1| putative diaminopimelate decarboxylase [Veillonella atypica
           ACS-049-V-Sch6]
          Length = 418

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 66/393 (16%), Positives = 123/393 (31%), Gaps = 29/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+++ D++ ++NN+   +     N G K   A+K      +   L +   G   SSL 
Sbjct: 21  PTPFHIYDEEGIVNNMKRFISAFSWNKGFKQYFAVKATPNPYIMRVLQKLGVGADCSSLA 80

Query: 62  EVMLG-HEKFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E++L       G    +        E    L     I  + ++ +   +     L     
Sbjct: 81  ELLLCEKVGITGHDIMFTSNDTPYVEYKKALDMGAIINLDDITHIEYLEKHHGSLPDTFC 140

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVNGLMFHNNCENKSFLC- 174
           +R NP                ++ G   +   E+  +     V     H    +      
Sbjct: 141 VRYNPGPLKEGGNTIIGLPEEAKYGMTREQVFEAYKQLQVKGVKHFGLHTMVVSNELDID 200

Query: 175 -----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
                         +        +E+I LGGG+    K        ++L E   +   +I
Sbjct: 201 GLVGTAEICFNLAVEIKEKLGIDVEFIDLGGGVGVAYKPEQTPVDFEKLGERVHEAYDRI 260

Query: 230 Y-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                        E G  +      L +T +   +  ++ + +DS +   +   L     
Sbjct: 261 IKGNGLKDIALAYECGRMVTGPFGYLVSTAIHKKDIYRHYIGLDSCMANLMRPALYGSYH 320

Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        + IGDRI   D   +  +    +
Sbjct: 321 HITVMGKENAPKDHVYDVTGSLCENNDKFAIQRELPKIDIGDRIIIHDAGAHGHSMGFNY 380

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       + + DG++  IR   +Y+D +  L
Sbjct: 381 NGKLRSAELLLHKDGSVTQIRRAETYDDLFGTL 413


>gi|254556609|ref|YP_003063026.1| diaminopimelate decarboxylase [Lactobacillus plantarum JDM1]
 gi|254045536|gb|ACT62329.1| diaminopimelate decarboxylase [Lactobacillus plantarum JDM1]
          Length = 441

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 58/399 (14%), Positives = 128/399 (32%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           +TP Y+ D   +   +     + +      ++  A K FA   M+  + Q        S 
Sbjct: 31  QTPLYVYDTGAIRAEIAAFKQVFEENHVDYQISYASKAFATVAMYQLIAQEHIHCDVVSG 90

Query: 61  YEVMLGHEK-FGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    +  F     +++   K       A+ +   TI+ +   +L +      +  + 
Sbjct: 91  GELYTAQQADFPMAAVSFHGNNKSLAELTMALDAGVGTIVVDNFGELRQLTTLTTQRQQP 150

Query: 118 IGLR--INPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             +   I P +S          +  S+ G         +  K    +    + G+  H  
Sbjct: 151 TTIMLRIAPGISAHTHDYISTGQADSKFGFDLDSGQADQAIKAAQAAPYLKLVGIHCHIG 210

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEW----ISLGGGIHFTDKDYPVK-----DFCQR 217
            +      F  ++  +  EF  +  ++++    +++GGG                     
Sbjct: 211 SQIFEVNGFEMIVDKLVSEFARWQRELDFYPQIMNVGGGFGVKYTAEDHPLQPTDFVDAI 270

Query: 218 LKEFSEKY------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269
           +KE   +        ++I++EPG ++V        T+ D  +         VD  +  ++
Sbjct: 271 IKETRAQTAAQQVPMLEIWIEPGRSLVATAGMTLYTIGDEKDIPGIRKYLSVDGGMGDNI 330

Query: 270 PDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   +            A + G+ C +GD+            GD +   D   
Sbjct: 331 RPALYQAKYEAVLAKNPALPAEQVASIAGKYCESGDMLIWNQQLPATAPGDVLVVLDTGA 390

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  + +N    P +       +   ++  SY D   
Sbjct: 391 YGYSMASNYNRNPRPAVVFCEQGHSQLVVQRESYADLTR 429


>gi|254520637|ref|ZP_05132693.1| diaminopimelate decarboxylase [Clostridium sp. 7_2_43FAA]
 gi|226914386|gb|EEH99587.1| diaminopimelate decarboxylase [Clostridium sp. 7_2_43FAA]
          Length = 430

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 66/400 (16%), Positives = 127/400 (31%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++D+Q L++N    +   K  +   ++  A K F    M   +++        S 
Sbjct: 29  GTPLYVMDEQLLIDNCRDYVKYFKVNSENNRVAFAGKAFLTLEMCRLIDREGLYLDVVSG 88

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F  E   ++   K  E             I + + ++ K  + +      
Sbjct: 89  GELYTAYKANFPMEKIYFHGNNKTLEEIEFGIKLGVGRFIVDNLWEMIKINEISEKYNKV 148

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           +K+ LR+ P +           +  S+ G         +  K  +E E   + GL  H  
Sbjct: 149 QKVYLRLTPGIEAHTHEYIKTGQIDSKFGFAPVGNIIMDAIKKALELENIELVGLHCHIG 208

Query: 167 CENKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVK---------- 212
            +      F+   + +              IE + LGGG      +              
Sbjct: 209 SQIFETEPFADAAEVMINFINNIRQETGHMIEELDLGGGFGIYYSEGDKPKETKEYCDII 268

Query: 213 -DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269
            +    +          + +EPG +IV N  T   T+  I E         +D  +  ++
Sbjct: 269 LNRVNEVCNKLSLKKPILTIEPGRSIVANAGTTLYTIGSIKEIPGVRKYLAIDGGMTDNI 328

Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   +  N           V G+ C +GDI  +    +  + GD ++      
Sbjct: 329 RPALYEAKYEALIANKASGNIESKVTVAGKCCESGDILLQDINLQEAESGDILAVLSTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  + +N    P +            +  SY +   N
Sbjct: 389 YGFSMSSGYNKNLRPAVVFVRNGEAKVVCKRQSYEELLIN 428


>gi|282916666|ref|ZP_06324424.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           D139]
 gi|283770471|ref|ZP_06343363.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           H19]
 gi|282319153|gb|EFB49505.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           D139]
 gi|283460618|gb|EFC07708.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           H19]
          Length = 421

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 62/394 (15%), Positives = 124/394 (31%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D+ ++   +    +  K++G+K  +  A K F    M   + +        S 
Sbjct: 26  GTPTIVYDELQIREQMRRYHHAFKDSGLKYNISYASKAFTCIQMVKLVAEEDLQLDVVSE 85

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    E  F      ++   K          +N    + +++ ++      A    + 
Sbjct: 86  GELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVIDSLEEIELIDRYANDTVQV 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + LR+NP V           +  S+ G                +++   + G+  H   +
Sbjct: 146 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAKKAIDKVQQTKHLKLKGVHCHIGSQ 204

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
            +    F    K + +       Q+E ++LGGG      +       +   +        
Sbjct: 205 IEGTEAFIETAKIVLRWLKEQDIQVELLNLGGGFGIKYVEGDESFPIESGIKDITDAIKS 264

Query: 229 IY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274
                        +EPG +IV         V  I E       V     +  H+   L  
Sbjct: 265 EIKVLGVNAPEIGIEPGRSIVGEAGVTLYEVGTIKEIPGINKYVSIDGGMSDHIRTALYD 324

Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331
             YQ            +  + G+ C +GDI  +       VK GD ++      Y+ +  
Sbjct: 325 AKYQALLVNRNEEADDSVTIAGKLCESGDIIIKDAKLPSSVKRGDYLAILSTGAYHYSMA 384

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + +N +  P++         + I+  S      N
Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418


>gi|269836759|ref|YP_003318987.1| diaminopimelate decarboxylase [Sphaerobacter thermophilus DSM
           20745]
 gi|269786022|gb|ACZ38165.1| diaminopimelate decarboxylase [Sphaerobacter thermophilus DSM
           20745]
          Length = 441

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 58/401 (14%), Positives = 112/401 (27%), Gaps = 38/401 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D+  L    D      +      +++ A K + A  +   L++        S 
Sbjct: 30  GTPLYIYDEATLRQRADAYRQAFERHYPRARVVYAGKAYLATWLLPLLDEAGLWLDVVSG 89

Query: 61  YEVMLG-HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+ L     F  E   ++      +    A+      ++ +   ++         +++ 
Sbjct: 90  GELYLAVRGGFPAERIVFHGNNKTPEELALALELGVGEVVIDNHYEIELLAQLTAERQVA 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
             + LR+NP V              S+ G            +         + G   H  
Sbjct: 150 LDVLLRVNPGVDAHTHEYRKTGIVDSKFGLLIQSGDAARAVERIRAVPGLRLRGYHAHIG 209

Query: 167 CENKSFLCFSAM----LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK--- 219
            +      F+           +    F    + IS GGG     +        +      
Sbjct: 210 SQIAETEPFATTINVLFAFAAEMRDRFGVVPDQISPGGGWAIPYESDDPDAAIEPYAAAV 269

Query: 220 --------EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
                   E        + +EPG +IV         V  I +    +  V VD  +  ++
Sbjct: 270 AGSALQAAERWGFDPPVLTVEPGRSIVGPAGVAVYRVGAIKDIPGVRRYVCVDGGMADNI 329

Query: 270 PDYLLYQESATIYPN-----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
              L          N     +      + G+ C +GD+         V+ GD ++     
Sbjct: 330 RPPLYGARYTAALANRDGAGSDHAVVTIAGKYCESGDVLIRDVELPTVEPGDLLALPAAG 389

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            Y +   + +N    P +            R   Y D    
Sbjct: 390 AYCLAMASNYNLALRPAVVAVADGRARLVQRRERYEDLLAR 430


>gi|297564795|ref|YP_003683767.1| diaminopimelate decarboxylase [Meiothermus silvanus DSM 9946]
 gi|296849244|gb|ADH62259.1| diaminopimelate decarboxylase [Meiothermus silvanus DSM 9946]
          Length = 394

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 66/369 (17%), Positives = 128/369 (34%), Gaps = 19/369 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+Y  D  ++ + +            +LL A+K     G+   L  +  G  + SL E
Sbjct: 27  ETPFYAYDLTRIHSRVKALRQSFPR--ARLLYAMKANPRLGILRRLRGWGVGLEAVSLGE 84

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIG 119
           V+      +  E    N   K   +   L       +  ++++ L +          K+ 
Sbjct: 85  VLRAYRAGYTPEEVLLNGPVKTPAMLEELRGAGLPILGVDSMADLERIARL--LPGAKVI 142

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK----IESEIKNVN--GLMFHNNCENKSFL 173
           LR+NP +  +        R  S+ G    +       ++   +   GL  H     +S  
Sbjct: 143 LRVNPDLPIATHDHLATGRGESKFGILAAEVPASVRRAKQAGLEFLGLHLHLGSALESLE 202

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
            F    + +E  +       + ++LGGG       +      +  ++ ++ +  Q++LEP
Sbjct: 203 DFQEGYRVLEALYESIGPT-QVLNLGGGFGLN---FDPAQVSEAAQKLADTFGAQLWLEP 258

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY--TAM 291
           G  +V     L T V       +N ++VD+ +   +   L   +   I    GP      
Sbjct: 259 GRYLVAEAGVLLTRVWGTKRTRRNYLLVDAGMMTLLRPMLYGAQHPVIPLYEGPEVRAWD 318

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
           + G  C +GD+          K GD ++      Y  +  + +     P   + N     
Sbjct: 319 LAGPVCESGDVLARNVPLPTPKEGDALAILQAGAYGSSMSSNYLDHPRPLEILWNGAEWE 378

Query: 352 KAIREFSYN 360
              R  S  
Sbjct: 379 VLRRPQSLE 387


>gi|160916126|ref|ZP_02078333.1| hypothetical protein EUBDOL_02153 [Eubacterium dolichum DSM 3991]
 gi|158431850|gb|EDP10139.1| hypothetical protein EUBDOL_02153 [Eubacterium dolichum DSM 3991]
          Length = 428

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 63/397 (15%), Positives = 120/397 (30%), Gaps = 37/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           +TP Y+ D++K+   L     +        ++L A K F    + + + Q+       S 
Sbjct: 21  QTPLYIYDEEKISTKLAQFHDLFQSDALETEVLYASKAFTCKALLELVKQHGLSLDVVSG 80

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK--LH 115
            E+ +  +  F  E   ++   K  E   +       TI+ +   +       A++    
Sbjct: 81  GELYVAKQADFPMERVYFHGNNKSYEELQMALSYGIGTIVVDNAMECELLVQVAKQSGHS 140

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----------NVNGLMFHN 165
            K  LR+NP V              S+ G     K E              +  G   H 
Sbjct: 141 VKALLRVNPGVEAHTHKYIVTAHLDSKFGTSITHKEEIAHMVQTLSAIPNIHFEGFHSHI 200

Query: 166 NCENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEF 221
             +             ++K + +    +  Q + ++LGGG                +   
Sbjct: 201 GSQIFDANAYVAEIQTLMKFVYELQEEYQIQTKALNLGGGFAAYYTAEDKPIPLSEVCST 260

Query: 222 SEKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHV 269
                            ++ +EPG +IV    +    V    +   K  V VD  +  ++
Sbjct: 261 ILDTCSMEKERYQLPLCKVMIEPGRSIVAEAGSTLYRVGFTKQTANKKYVFVDGGMSDNI 320

Query: 270 PDYLLYQESAT----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L     A                + G+ C +GDI  E       +  D +       
Sbjct: 321 RPALYQAAYACDLANRMNEEKCEKVTIAGKCCESGDILIEDVMLPHAQRNDLLILYTTGA 380

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
           Y  +  + +N +  P +           ++  SY D 
Sbjct: 381 YGYSMASNYNRLGRPAVVFVKNGKARIVVKRESYEDM 417


>gi|293977852|ref|YP_003543282.1| diaminopimelate decarboxylase [Candidatus Sulcia muelleri DMIN]
 gi|292667783|gb|ADE35418.1| diaminopimelate decarboxylase [Candidatus Sulcia muelleri DMIN]
          Length = 404

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 64/383 (16%), Positives = 120/383 (31%), Gaps = 23/383 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP Y+ D  ++                +K+  A K      + +   +   G  + S+ 
Sbjct: 20  GTPLYVYDANQIEFQYKLIKKSFFYIENLKINYACKANPNISILNFFKKLGSGLDTVSIQ 79

Query: 62  EVMLGH-EKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           EV +G    F  +   Y        EI   +     I  + +S L +     +  +  IG
Sbjct: 80  EVEIGLKAGFKPKEIIYTPNGVSLSEIKKAIKAGVLINIDNLSLLEQIGH--ENPNYPIG 137

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSFL 173
           +RI P++              S+ G         K  +E+    V G+  H   +     
Sbjct: 138 IRITPNIIGGGNKKISVGHINSKFGISYYQLPNLKRIVENTGIKVEGIHMHTGSDIIDLE 197

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY------SV 227
            F      +      F  ++++I  G G          K     L  F +K       ++
Sbjct: 198 VFLQGADILLNVASSFN-ELKYIDFGSGFKVPYHKNDTKTDLDMLGVFFKKKISRVCKNI 256

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIY---P 283
           +I  EPG+ +V+ +      V  I          VDS     +                P
Sbjct: 257 KIVFEPGKFLVSESGYFIVKVNVIKHTTSTVFACVDSGFNHFIRPMFYDSYHQIDNLSNP 316

Query: 284 NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343
           +    +  V G  C + D F        ++ GD + F +   Y  +  + +N    P+  
Sbjct: 317 SGKLRSYTVVGYICES-DTFCVNIKINEIREGDILCFRNAGAYCFSMSSNYNSRYRPSEV 375

Query: 344 VKNVDGTIKAIREFSYNDYYNNL 366
           +   + +    R  +  D    +
Sbjct: 376 IIYNNKSFLIRRRENMQDLLKKM 398


>gi|120600508|ref|YP_965082.1| diaminopimelate decarboxylase [Shewanella sp. W3-18-1]
 gi|120560601|gb|ABM26528.1| diaminopimelate decarboxylase [Shewanella sp. W3-18-1]
          Length = 414

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 58/382 (15%), Positives = 109/382 (28%), Gaps = 23/382 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  A   + + L +   G    S  E
Sbjct: 26  GTPLYIYSRATLERHWHAFNNAVMDHPHLICYAVKANANLAVLNVLARLGSGFDIVSGGE 85

Query: 63  -VMLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
              +           ++   K       A+          + ++L +    A +L K   
Sbjct: 86  LARVIEAGGSPAKVVFSGVGKTVAEMEQALNLGIYCFNVESSAELEQLNLVAGRLGKVAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           + LRINP V              ++ G    +               V G+  H   +  
Sbjct: 146 VSLRINPDVDAGTHPYISTGLKENKFGIAMDEAEIVFARAHALPHLKVKGVDCHIGSQLT 205

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
               F   +  +             IE   +GGG+  T  D        +   L +    
Sbjct: 206 EIQPFLDAMDRMLALIDRLAEQGIVIEHFDVGGGLGVTYDDETPPHPDVYAAALLKRLGN 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQE---SAT 280
             +++  EPG AI  N     T VL +   + K   IVD ++   +   L          
Sbjct: 266 RKLKLIFEPGRAIAANAGIFVTQVLYLKENSDKRFAIVDGAMNDLIRPALYSAWQNIIPV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
           +  ++  Y   + G  C  GD  G+            ++      Y     + +N     
Sbjct: 326 VPRDSEAYEFDIVGPVCETGDFLGKERKLALAAGD-LLAVRSSGAYGFAMASNYNTRPRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDY 362
              + + +           +  
Sbjct: 385 AEVMVDGEHAFLVREREKISQL 406


>gi|15231844|ref|NP_188056.1| diaminopimelate decarboxylase, putative / DAP carboxylase, putative
           [Arabidopsis thaliana]
 gi|75306310|sp|Q949X7|DCDA1_ARATH RecName: Full=Diaminopimelate decarboxylase 1, chloroplastic;
           Short=DAP decarboxylase 1; Flags: Precursor
 gi|18026845|gb|AAL55653.1|AF227913_1 diaminopimelate decarboxylase [Arabidopsis thaliana]
 gi|15292779|gb|AAK92758.1| putative diaminopimelate decarboxylase [Arabidopsis thaliana]
 gi|21594037|gb|AAM65955.1| putative diaminopimelate decarboxylase [Arabidopsis thaliana]
 gi|21689775|gb|AAM67531.1| putative diaminopimelate decarboxylase [Arabidopsis thaliana]
 gi|332641990|gb|AEE75511.1| diaminopimelate decarboxylase 1 [Arabidopsis thaliana]
          Length = 484

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 62/387 (16%), Positives = 123/387 (31%), Gaps = 27/387 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+YL  K ++  NL+      +     +  A+K      + + L     G    S  E+ 
Sbjct: 93  PFYLYSKPQITRNLEAYKEALEGVSSVIGYAIKANNNLKILEHLRSLGCGAVLVSGNELR 152

Query: 65  LG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKIGL 120
           L     F      +N       ++         +  ++   LN   + ++       + L
Sbjct: 153 LALRAGFDPTKCIFNGNGKSLEDLVLAAQEGVFVNVDSEFDLNNIVEASRISGKQVNVLL 212

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCENKSF 172
           RINP V              S+ G + +       +         + G   H        
Sbjct: 213 RINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDQVKAHPKELKLVGAHCHLGSTITKV 272

Query: 173 LCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSEK 224
             F      + +          ++ ++++GGG+               D    ++E    
Sbjct: 273 DIFRDAAVLMIEYIDEIRRQGFEVSYLNIGGGLGIDYYHAGAVLPTPMDLINTVRELVLS 332

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + + +EPG +++ NT      V  +  N  KN +++D S+   +   L          
Sbjct: 333 RDLNLIIEPGRSLIANTCCFVNHVTGVKTNGTKNFIVIDGSMAELIRPSLYDAYQHIELV 392

Query: 284 NTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
           +  P         V G  C + D  G+         G  +   D   Y ++  + +N   
Sbjct: 393 SPPPAEAEVTKFDVVGPVCESADFLGKDRELPTPPQGAGLVVHDAGAYCMSMASTYNLKM 452

Query: 339 MPTIAVKNVDGTIKAIRE-FSYNDYYN 364
            P       DG+I  IR   +++D+  
Sbjct: 453 RPPEYWVEEDGSITKIRHAETFDDHLR 479


>gi|9279586|dbj|BAB01044.1| unnamed protein product [Arabidopsis thaliana]
          Length = 526

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 62/387 (16%), Positives = 123/387 (31%), Gaps = 27/387 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+YL  K ++  NL+      +     +  A+K      + + L     G    S  E+ 
Sbjct: 135 PFYLYSKPQITRNLEAYKEALEGVSSVIGYAIKANNNLKILEHLRSLGCGAVLVSGNELR 194

Query: 65  LG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKIGL 120
           L     F      +N       ++         +  ++   LN   + ++       + L
Sbjct: 195 LALRAGFDPTKCIFNGNGKSLEDLVLAAQEGVFVNVDSEFDLNNIVEASRISGKQVNVLL 254

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCENKSF 172
           RINP V              S+ G + +       +         + G   H        
Sbjct: 255 RINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDQVKAHPKELKLVGAHCHLGSTITKV 314

Query: 173 LCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSEK 224
             F      + +          ++ ++++GGG+               D    ++E    
Sbjct: 315 DIFRDAAVLMIEYIDEIRRQGFEVSYLNIGGGLGIDYYHAGAVLPTPMDLINTVRELVLS 374

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + + +EPG +++ NT      V  +  N  KN +++D S+   +   L          
Sbjct: 375 RDLNLIIEPGRSLIANTCCFVNHVTGVKTNGTKNFIVIDGSMAELIRPSLYDAYQHIELV 434

Query: 284 NTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
           +  P         V G  C + D  G+         G  +   D   Y ++  + +N   
Sbjct: 435 SPPPAEAEVTKFDVVGPVCESADFLGKDRELPTPPQGAGLVVHDAGAYCMSMASTYNLKM 494

Query: 339 MPTIAVKNVDGTIKAIRE-FSYNDYYN 364
            P       DG+I  IR   +++D+  
Sbjct: 495 RPPEYWVEEDGSITKIRHAETFDDHLR 521


>gi|239617262|ref|YP_002940584.1| diaminopimelate decarboxylase [Kosmotoga olearia TBF 19.5.1]
 gi|239506093|gb|ACR79580.1| diaminopimelate decarboxylase [Kosmotoga olearia TBF 19.5.1]
          Length = 395

 Score =  208 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 56/374 (14%), Positives = 123/374 (32%), Gaps = 15/374 (4%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           +  TP Y+  ++++ N +D  L + +   V    A+K      +   +     G    + 
Sbjct: 11  VYGTPVYVYFEKEIKNRIDNVLGVFEGINVFPTFAVKANNNPHLLKVIYNKGFGMDVITP 70

Query: 61  YEVMLG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E+          E   +N     + +I   + +   +  ++  ++  +K K  + + ++
Sbjct: 71  GELYAAKLAGASPEKLVWNGNGKTETDIKKFIGSVKYVNVDSFEEMEIWKKK--EANVEL 128

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE----IKNVNGLMFHNNCENKSFLC 174
            +R+NP++               + G       E         + GL  H   +  +   
Sbjct: 129 FIRVNPNIDARTHPHISTGLKKHKFGIPLDKLDEFLKKFPDNRIKGLHVHIGSQITTVAP 188

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE-FSEKYSVQIYLEP 233
           F    + + +    +    E I++GGG         +     R K     K   ++  E 
Sbjct: 189 FVEAFEKVSEVSKKYG--FEKINIGGGWGINYDGKELDLLEYRKKVVPLLKNFKEVICEI 246

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTGP--YTA 290
           G  I+  +  L   VL++ +      +V D  +   +   L                   
Sbjct: 247 GRYIIGPSGILLLKVLNLKKTDDKYFVVVDGGMNTLIRPALYGAHHGIKILEPTALSGKI 306

Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGT 350
            + G  C +GD        +  ++   +  E+   Y  +  N +N    P   +   +G 
Sbjct: 307 DIVGPLCESGDKLAWDIEIELPEVSSLLYVENAGAYGFSMSNNYNSTLRPAEVLVKENGE 366

Query: 351 I-KAIREFSYNDYY 363
           I    R  + ND +
Sbjct: 367 IVLIRRRETLNDLF 380


>gi|260101761|ref|ZP_05751998.1| diaminopimelate decarboxylase [Lactobacillus helveticus DSM 20075]
 gi|157272210|gb|ABV26736.1| diaminopimelate decarboxylase [Lactobacillus helveticus CNRZ32]
 gi|260084432|gb|EEW68552.1| diaminopimelate decarboxylase [Lactobacillus helveticus DSM 20075]
 gi|328468047|gb|EGF39055.1| diaminopimelate decarboxylase [Lactobacillus helveticus MTCC 5463]
          Length = 438

 Score =  208 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 58/398 (14%), Positives = 118/398 (29%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D +++ + +     + +   VK  +  A K FA   M+         T   S 
Sbjct: 31  GTPLVVYDVEQIRHQIRAFKKVFEEENVKYAVSYASKAFACIAMYQVAAAEGAYTDVVSD 90

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F  +  +++   K      +   ++   II +   ++             
Sbjct: 91  GELYTALKANFPVKKISFHGNNKSKSELEMAVKNHIGKIIIDNFHEIKLLDQVLRKHDAK 150

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             + LRI P +S          +  ++ G            +  + +   N+ G+  H  
Sbjct: 151 IDVMLRITPGISAHTHEYDQTGQVDNKFGFDLESGQADLALEQVLANSRMNMIGIHAHIG 210

Query: 167 CENKSFLCFSAM----LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-----DFCQR 217
            +      F       ++  E     +    + I++GGG                     
Sbjct: 211 SQIFELNGFEMAAKKLMEVAENWRSQYGYTAQVINVGGGFGIKYTAEDNPLRPEEFVRAI 270

Query: 218 LKEFSEKYSVQIY------LEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHV 269
           +K   ++     +      +EPG +IV              I       V VD  +  ++
Sbjct: 271 VKTIKKEAKNAAFPLPEIDIEPGRSIVGPAGYNLYITGSRKIVPGHCPYVTVDGGMGDNI 330

Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +  T+              + G+ C +GDI  +       K G  ++  D   
Sbjct: 331 RPALYDAKYETVLATDPRADLTEHVRIAGKYCESGDILADDQALPATKSGSLLAMLDTGA 390

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
           Y  +  + +N    P +           I+  S  D  
Sbjct: 391 YGYSMASNYNRNARPAVVFAENGKAQLVIKRESLEDLV 428


>gi|150399267|ref|YP_001323034.1| diaminopimelate decarboxylase [Methanococcus vannielii SB]
 gi|150011970|gb|ABR54422.1| diaminopimelate decarboxylase [Methanococcus vannielii SB]
          Length = 436

 Score =  208 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 67/400 (16%), Positives = 138/400 (34%), Gaps = 35/400 (8%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVK-----LL-LALKCFAAWGMFDTLNQYMDG 54
           M +TP Y++ + + + N +  +   K    K     +   A K      +   L++   G
Sbjct: 29  MYETPLYVMSETQTVKNFERYVESFKEYSEKTGKETIFSFAYKANTNLALTKLLSKLGCG 88

Query: 55  TTSSSLYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKA 111
               S  E+ +        E   +N   K  E   +           +++S L    + A
Sbjct: 89  ADIVSAGELYIAKISNVPSEKIVFNGNCKLKEEIKMGIETKIRAFNVDSISDLILINETA 148

Query: 112 QKLHK--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNG 160
           +++ K   +  R+NP+V              ++ G   +            + E   + G
Sbjct: 149 KEMGKIANVAFRVNPNVDPKTHPKISTGMKKNKFGLDIESGIALQTIKMAEKMENVKIVG 208

Query: 161 LMFHNNC---ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP----VKD 213
           +  H      E   F+  +  + +      +    I  ++LGGG+             KD
Sbjct: 209 IHCHIGSQLTEISPFVEETRKIMDFVVLLKNEGININDVNLGGGLGIPYDKQKVIPVQKD 268

Query: 214 FCQRLKEFSEKYS-----VQIYLEPGEAIVTNTTTLNTTVLDISENIK-NLVIVDSSVEA 267
             + +     +Y        + LEPG +IV  +  L  TV  I +      +++D+ +  
Sbjct: 269 LAKAILSVIYEYESKIELPNLILEPGRSIVATSGVLLGTVKHIKDTPVAKWIMIDAGMND 328

Query: 268 HVPDYLL--YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
            +   +   Y E  +    +      + G  C + D+FG+      +++ D I+  DV  
Sbjct: 329 MMRPAIYEAYHEITSCTLRSEKEVVSIAGGLCESSDVFGKDRELSKIEVNDTIAILDVGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y I+  N +N    P + + +           +  D  + 
Sbjct: 389 YGISMANNYNSRGKPAMVLTSEKEVSIIRERETLADLISK 428


>gi|18416698|ref|NP_568252.1| diaminopimelate decarboxylase, putative / DAP carboxylase, putative
           [Arabidopsis thaliana]
 gi|75306321|sp|Q94A94|DCDA2_ARATH RecName: Full=Diaminopimelate decarboxylase 2, chloroplastic;
           Short=DAP decarboxylase 2; Flags: Precursor
 gi|15146250|gb|AAK83608.1| AT5g11880/F14F18_50 [Arabidopsis thaliana]
 gi|22655428|gb|AAM98306.1| At5g11880/F14F18_50 [Arabidopsis thaliana]
 gi|332004351|gb|AED91734.1| diaminopimelate decarboxylase 2 [Arabidopsis thaliana]
          Length = 489

 Score =  208 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 62/387 (16%), Positives = 123/387 (31%), Gaps = 27/387 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+YL  K ++  NL+      +     +  A+K      + + L     G    S  E+ 
Sbjct: 98  PFYLYSKPQITRNLEAYKEALEGVRSVIGYAIKANNNLKILEHLRSLGCGAVLVSGNELR 157

Query: 65  LGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKIGL 120
           L     F      +N       ++         +  ++   LN   + ++       + L
Sbjct: 158 LALLAGFDPTKCIFNGNGKSLEDLVLAAQEGVFVNVDSEFDLNNIVEASRISGKQVNVLL 217

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCENKSF 172
           RINP V              S+ G + +       +         + G   H        
Sbjct: 218 RINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDEVKAHPKELKLVGAHCHLGSTITKV 277

Query: 173 LCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSEK 224
             F      + +          ++ ++++GGG+               D    ++E    
Sbjct: 278 DIFRDAAVLMIEYIDEIRRQGFEVSYLNIGGGLGIDYYHAGAVLPTPMDLINTVRELVLS 337

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + + +EPG +++ NT      V  +  N  KN +++D S+   +   L          
Sbjct: 338 RDLNLIIEPGRSLIANTCCFVNHVTGVKTNGTKNFIVIDGSMAELIRPSLYDAYQHIELV 397

Query: 284 NTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
           +  P         V G  C + D  G+         G  +   D   Y ++  + +N   
Sbjct: 398 SPTPPEAEVTKFDVVGPVCESADFLGKDRELPTPPQGAGLVVHDAGAYCMSMASTYNLKM 457

Query: 339 MPTIAVKNVDGTIKAIRE-FSYNDYYN 364
            P       DG+I  IR   +++D+  
Sbjct: 458 RPPEYWVEEDGSITKIRHAETFDDHLR 484


>gi|257790053|ref|YP_003180659.1| diaminopimelate decarboxylase [Eggerthella lenta DSM 2243]
 gi|317489497|ref|ZP_07948007.1| diaminopimelate decarboxylase [Eggerthella sp. 1_3_56FAA]
 gi|325830440|ref|ZP_08163897.1| diaminopimelate decarboxylase [Eggerthella sp. HGA1]
 gi|257473950|gb|ACV54270.1| diaminopimelate decarboxylase [Eggerthella lenta DSM 2243]
 gi|316911426|gb|EFV33025.1| diaminopimelate decarboxylase [Eggerthella sp. 1_3_56FAA]
 gi|325487907|gb|EGC90345.1| diaminopimelate decarboxylase [Eggerthella sp. HGA1]
          Length = 451

 Score =  208 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 65/400 (16%), Positives = 123/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            T  Y++D+  +   ++T L   +       ++ A K F        +         S  
Sbjct: 50  GTALYVMDEADMRTRMETYLAAFRSRYQNSDVVYASKAFLNKEAARIVADEGLCLDVSGG 109

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+ +     F  E    +   K      +A+ +    II ++  +L +  + A +L   
Sbjct: 110 GELAIALAAGFPTERIFMHGNNKTPRELREAIQAGVGRIIIDSRIELKRISEIAGELGVV 169

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNN 166
           + I +RI P V              S+ G            KD + +    + GL  H  
Sbjct: 170 QPIYMRITPGVEADTHQYIRTGCEDSKFGFTMRDDFAYGCVKDVLAAPNVRLAGLHCHIG 229

Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            +             M++ + +    +  +IE + +GGG+                 E  
Sbjct: 230 SQIFALHSYPEAVEVMVELMARIEEGYGYRIEELDVGGGLGIAYTADDKPASIDEFAETV 289

Query: 223 EKYSVQIY-----------LEPGEAIVTNTTTLNTTV--LDISENIKNLVIVDSSVEAHV 269
                               EPG ++V        TV  L     I+  V VD  +  ++
Sbjct: 290 TSAVHAACEKFGVPEPRLLTEPGRSLVATAGVTLYTVGILKTLPGIRKYVAVDGGMSDNI 349

Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L + +   +  N           + G+ C +GD        +   +GD ++      
Sbjct: 350 RTALYHADYEPVIANKAGQPRTEIVTIAGKHCESGDAVVIDMPMQHPDLGDIVAVFGTGA 409

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y     + +NG   P I            R  +Y D  + 
Sbjct: 410 YCYTMASNYNGQPRPAIVFVKDGQARVTTRRETYEDLMSR 449


>gi|257468497|ref|ZP_05632591.1| diaminopimelate decarboxylase [Fusobacterium ulcerans ATCC 49185]
 gi|317062756|ref|ZP_07927241.1| diaminopimelate decarboxylase [Fusobacterium ulcerans ATCC 49185]
 gi|313688432|gb|EFS25267.1| diaminopimelate decarboxylase [Fusobacterium ulcerans ATCC 49185]
          Length = 434

 Score =  208 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 63/400 (15%), Positives = 130/400 (32%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++D+  +  N+       K       ++ A K F +  +   + +Y     + S 
Sbjct: 29  GTPLYIMDQALIEENITKYKNNFKSTKFDTSIVYASKAFLSKAICQLVGKYDIDIDAVSG 88

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKK 117
            E+          +    +   K  E   +  + +   II +   ++ +     ++  K+
Sbjct: 89  GELYAIKASGLPMKKVHMHGNNKTNEELEMCLDYEIGSIIIDNEEEIGRLSKICKEKDKQ 148

Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
           +   +RIN  +          ++  S+ GE           +  ++ E     G   H  
Sbjct: 149 VKVMMRINIGIDAHTHEYIKTSKHSSKFGESIFDERITEIVEKIVKDENMEFLGFHCHIG 208

Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            +            +M+K  +K        I  I+LGGG      +       ++     
Sbjct: 209 SQIFDTKAFHEGIESMVKETKKISEALGIYIPEINLGGGFGVYYTEKDTAIDIEQFMRSM 268

Query: 223 EKYSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
            ++  +             +EPG +IV N  +   TV            + +D  +  ++
Sbjct: 269 IEHLEKSIEAEKLEIKKVTIEPGRSIVANAGSTLYTVGGTKTTYGGVKYIFIDGGMTDNI 328

Query: 270 PDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   E  +I  N           V G+ C +GD+  +       + GD +       
Sbjct: 329 RPALYQAEYESIVANKVDAPAEEIVTVAGKCCESGDLIIKDGKLAKAETGDLVLVATTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N    P +       +  +I+  S+ D   N
Sbjct: 389 YGHSMSNNYNKAPKPAVVFVKDGKSTLSIKRESFEDLIRN 428


>gi|126642667|ref|YP_001085651.1| diaminopimelate decarboxylase [Acinetobacter baumannii ATCC 17978]
          Length = 374

 Score =  208 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 58/371 (15%), Positives = 115/371 (30%), Gaps = 26/371 (7%)

Query: 21  ALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH-EKFGGETHAYNV 79
                     ++  A+K  +   + + L +   G    S  E+              ++ 
Sbjct: 1   MDRAFDFIDHQICFAVKSNSNIAVLNVLAKLGAGFDIVSGGELARVLKAGGDASKIVFSG 60

Query: 80  AYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKKIGLRINPSVSYSKFILAD 135
             K         N         + ++L++ +  A +L     I LR+NP V         
Sbjct: 61  LGKTEADIETSLNVGIACFNVESYAELDRIQKVAARLGKKAPISLRVNPDVDAKTHPYIS 120

Query: 136 PNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNC---ENKSFLCFSAMLKNIEKE 185
                ++ G                    + G+  H      E K F+     +  +  E
Sbjct: 121 TGLKENKFGIPSDAVYETYQYAASLPNLEIVGIDCHIGSQLTETKPFVDALDRVIVMIDE 180

Query: 186 FGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEKYSVQIYLEPGEAIVTNTT 242
                  ++ I +GGG+    KD       ++   +K   EK  +++Y+EPG +I  N  
Sbjct: 181 LKKLGINLKHIDIGGGLGVCYKDETPPSVEEYANSMKPALEKLGLKVYMEPGRSISANAG 240

Query: 243 TLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSC 297
            L T V L      +N  I+D+++   +   L              +T   T  + G  C
Sbjct: 241 VLLTKVDLLKPTTHRNFAIIDAAMNDLIRPALYEAWMDIQPVVPRTDTEEKTWDLVGAIC 300

Query: 298 LAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF 357
             GD  G+      ++  D ++      Y     + +N        + + + +       
Sbjct: 301 ETGDFIGKDRSLA-LQENDLLTVLGAGAYGFVMSSNYNTRGRAAEVMVSGEKSYLIRERE 359

Query: 358 SYNDY--YNNL 366
           +         L
Sbjct: 360 TVESLWEKERL 370


>gi|86133354|ref|ZP_01051936.1| Diaminopimelate decarboxylase [Polaribacter sp. MED152]
 gi|85820217|gb|EAQ41364.1| Diaminopimelate decarboxylase [Polaribacter sp. MED152]
          Length = 414

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 66/386 (17%), Positives = 113/386 (29%), Gaps = 27/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            +P Y+ D  K+ +  +       N   +KL  A+K  +   +         G  + S  
Sbjct: 14  GSPLYVYDTDKIASQYNRLTNAFSNVKNLKLNYAVKALSNVNILKFFKNLGAGLDTVSYQ 73

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           EV LG       +   Y        EI+ V      I  + +S L  F  K       + 
Sbjct: 74  EVQLGLTTGINPKNIIYTPNGVSLQEIEQVAKLGVQINIDNLSILEIFGQK--HPEIPVC 131

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFL 173
           +RINP +              S+ G         +        N+NG+  H   +     
Sbjct: 132 VRINPHIMAGGNSKISVGHIDSKFGISIHQVPHIKRVVENTGMNINGIHMHTGSDILDID 191

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI---- 229
            F      I  +       I++I  G G     K+  +    ++L     +   +     
Sbjct: 192 TFLRASD-ILFDVARQFKNIDFIDFGSGFKVPYKEGDISTDIEQLGIQLSERFNEFCSDY 250

Query: 230 ------YLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESA--T 280
                   EPG+ +V+        V  + +        VDS     V   +         
Sbjct: 251 GKDITLMFEPGKFLVSEAGVFLAKVNVVKQTTSTVFAHVDSGFNHLVRPMMYDSYHHITN 310

Query: 281 IYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
           I    G      V G  C   D F        +   D + F +   Y  +  + +N   +
Sbjct: 311 ISNPEGRDRYYSVVGYICET-DTFASNRRIAEISEEDVLCFHNAGAYCFSMASNYNSRYL 369

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365
           P   +          +  +  D  NN
Sbjct: 370 PAEVMLVDGKDYLIRKRQTIQDILNN 395


>gi|227522833|ref|ZP_03952882.1| diaminopimelate decarboxylase [Lactobacillus hilgardii ATCC 8290]
 gi|227090005|gb|EEI25317.1| diaminopimelate decarboxylase [Lactobacillus hilgardii ATCC 8290]
          Length = 435

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 66/399 (16%), Positives = 126/399 (31%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           KTP  + D   + N +     + ++  V   +  A K FA   MF  +NQ        S 
Sbjct: 31  KTPLVVYDVSSIRNQIHHFQKVFEDNHVDYAVSYASKAFACIAMFQLVNQENAHIDVVSG 90

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK--LH 115
            E+       F  +  +++   K  E   +        II +   ++   K   +    H
Sbjct: 91  GELYTAIKAGFPMDHVSFHGNNKSVEELEMAVDHQIGVIILDNFHEIALLKQILKDKDAH 150

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
             + LR+ P VS          +  S+ G             + +  +   + G+  H  
Sbjct: 151 INVMLRVTPGVSAHTHEYDQTGQTDSKFGFDLQSGQARKALDEVLADQRMTMLGIHAHIG 210

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQI----EWISLGGGIHFTDKDYPVKD--------F 214
            +      F      +    G +  +I    + +++GGG      +              
Sbjct: 211 SQIFEVKGFELAATKLIDTLGQWHKEIGYVAKVVNVGGGFGIRYTEKDDPIAPEMFVDAI 270

Query: 215 CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            + +K+ + +       +++EPG +I         TV    +       V     +  ++
Sbjct: 271 VKAIKKRARELALPMPAVWIEPGRSIAGPAGYNLYTVGSRKDVPGIRSYVTVDGGMGDNI 330

Query: 270 PDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   E   +  N        T  V G+ C +GDI  +       K GD ++      
Sbjct: 331 RPALYQAEYDAVLANDPKAPAKETVRVAGKYCESGDILIQKQALPQTKPGDVLAMLATGA 390

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y     + +N    P +          AIR  ++ D   
Sbjct: 391 YGYAMASNYNRNPRPAVIFVENGQDNLAIRRETFEDLIR 429


>gi|326382075|ref|ZP_08203768.1| diaminopimelate decarboxylase [Gordonia neofelifaecis NRRL B-59395]
 gi|326199501|gb|EGD56682.1| diaminopimelate decarboxylase [Gordonia neofelifaecis NRRL B-59395]
          Length = 473

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 58/406 (14%), Positives = 122/406 (30%), Gaps = 45/406 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D+    +            G ++  A K F +  +   +          S  E
Sbjct: 63  GTPLFVYDEADFRSRCADMQSAFGPYG-RVHYASKAFLSTQVAKWIESEGLSLDVCSGGE 121

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           + +     F  E  A +   K     A    +    I+ +++ ++ +    A  + +   
Sbjct: 122 LAIALRAGFPPERIALHGNNKAESELAAALDAGVGDIVLDSMVEIERLDRLAGERGVVAD 181

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
           + +R+ P V               + G         +  +    ++   + GL  H   +
Sbjct: 182 VLVRVTPGVEAHTHEFISTAHEDQKFGFALAGGVALDAVRAVFAADNLRLVGLHSHIGSQ 241

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F      ++  +      F  +    I+ + LGGG+  +  +         L E
Sbjct: 242 IFEIDGFELAARRVIGLLADVVAEFGVEKTKQIKVLDLGGGLGISYLESDDPPPVSVLAE 301

Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDIS------ENIKNLVIVDS 263
              +               I +EPG  I          V  +         ++  V VD 
Sbjct: 302 ALVEIVRRESESLNLPMPMIAVEPGRGIAGPAGVTLYRVGTVKDVALDGNTVRRYVSVDG 361

Query: 264 SVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318
            +  ++   L   E     A+           V G+ C +GDI     +    +  GD +
Sbjct: 362 GMSDNIRTVLYDAEYDVRLASRVSEAKAVVCRVVGKHCESGDIVIRDCWLPEDLAPGDLL 421

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
                  Y  +  + +N +    +A  N       +R  +  D+ +
Sbjct: 422 VVGATGAYCYSMSSRYNMVPRAAVATVNDGRARLMLRRETVEDFLS 467


>gi|302873537|ref|YP_003842170.1| diaminopimelate decarboxylase [Clostridium cellulovorans 743B]
 gi|307688283|ref|ZP_07630729.1| diaminopimelate decarboxylase [Clostridium cellulovorans 743B]
 gi|302576394|gb|ADL50406.1| diaminopimelate decarboxylase [Clostridium cellulovorans 743B]
          Length = 430

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 65/399 (16%), Positives = 122/399 (30%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ID++ + N   +     K      ++  A K F    M   +N+        S 
Sbjct: 29  GTPLYVIDEKLVRNTCKSYYDAFKVKEGKNRVAYAGKAFLPMEMCRIINEEGLCLDVVSG 88

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSN--CDTIIFNTVSQLNKFKDKAQKLH-- 115
            E+       F  E   ++   K  E   +  N    T + + + ++      A++ +  
Sbjct: 89  GELFTAYKAGFPLEKVFFHGNNKSHEEIKLGINLGVGTFVVDNLYEIELIDKYAKEKNVV 148

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
           + I  RI P +           +  S+ G            K   E E   + G+  H  
Sbjct: 149 QNIYFRITPGIEAHTHDYIQTGQIDSKFGFTIDSEALDFAIKTAKEKENIKLIGIHAHIG 208

Query: 167 CENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---------- 212
            +      +      M    ++    F   I  + LGGGI     D              
Sbjct: 209 SQIFDIEPYGDLVRLMFTLAKRIRDEFDIDITDVDLGGGIGVYYTDEDEPKSAQQFCETI 268

Query: 213 -DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            +  + + +       ++ +EPG +++ N  +   T+  I   +     V     +  ++
Sbjct: 269 VNKAEEIAKELRMEVPRLVIEPGRSVIGNAGSTLYTIGAIKSVLDIRKYVSIDGGMTDNI 328

Query: 270 PDYLLYQESAT----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L              +       V G+ C +GDI  +      V  GD +       
Sbjct: 329 RPALYNAAYECALANRMNDEEKEVVTVAGKCCESGDILLKDVEINKVNSGDILVVPTTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  N +N      +       T    R  SY +   
Sbjct: 389 YGYSMSNNYNKTPKAAVVSVMDGNTKVMCRRQSYEELIQ 427


>gi|51892948|ref|YP_075639.1| diaminopimelate decarboxylase [Symbiobacterium thermophilum IAM
           14863]
 gi|51856637|dbj|BAD40795.1| diaminopimelate decarboxylase [Symbiobacterium thermophilum IAM
           14863]
          Length = 443

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 61/398 (15%), Positives = 117/398 (29%), Gaps = 38/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++D++ +  N    +   +       +  A K F    M   + Q        S 
Sbjct: 30  GTPLYVMDEELIRQNCRAYVAAFRDHYPDFDVAYASKAFLCTAMAALVAQEGLSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  +   ++   K  +    A+ +     + +++ +L      A +    
Sbjct: 90  GEIATALQAGFPMDRTYFHGNNKTAEEIRLALEAGVGRFVVDSLHELELLNRLAGERGTT 149

Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNN 166
               LR+ P V           +  S+ G            +  ++++   + G   H  
Sbjct: 150 ARALLRVTPGVEAHTHEYISTGQLDSKFGIPIEGGQALDAARAALQADHVELLGFHCHIG 209

Query: 167 CENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            +      +      ML                +SLGGG+     +         L    
Sbjct: 210 SQIFDLTGYRVAADRMLAFAAAVREETGFTPSELSLGGGLGVRYVEGDRPLPPADLVACL 269

Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269
            +              ++ +EPG +IV    T   TV  I E         VD  +  ++
Sbjct: 270 AEAVRSGAAERALPLPKLIVEPGRSIVAEAGTTLYTVGTIKEIPGVRTYLSVDGGMGDNI 329

Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVK-IGDRISFEDVA 324
              L +        N           V GR C +GD+             GD ++     
Sbjct: 330 RPALYHARYECAVANKLDSERTRIVTVVGRYCESGDVLLTDAAVAADVAPGDLLAVFATG 389

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
            YN +  + +N    P +           +R  ++ D 
Sbjct: 390 AYNYSMASRYNRFPTPAVVFVRDGRADLVVRRETFADM 427


>gi|254414419|ref|ZP_05028185.1| diaminopimelate decarboxylase [Microcoleus chthonoplastes PCC 7420]
 gi|196178649|gb|EDX73647.1| diaminopimelate decarboxylase [Microcoleus chthonoplastes PCC 7420]
          Length = 469

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 55/398 (13%), Positives = 113/398 (28%), Gaps = 36/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P Y++D+  +                    +L A K +    +         G    S
Sbjct: 60  GSPLYILDEVTVRTACRQYRDAFARYYSGDTLVLYASKAWNCLAICAIAASEGLGVDVVS 119

Query: 60  LYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK- 116
             E+    E     +   ++   K      +       I+ +   +L    D AQK    
Sbjct: 120 GGELYTALEAGVPADKLYFHGNNKSIAELQLAIESHCTIVVDNQLELETLADLAQKTSPD 179

Query: 117 ---KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNN 166
              +I +RI P +              S+ G              ++ I +  GL  H  
Sbjct: 180 TQVRIMIRITPGIECHTHDYIRTGHLDSKFGFDPHTLDNVFAFISQNPILDCIGLHAHIG 239

Query: 167 CENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL----- 218
            +         +     +  ++   F   I+ +++GGG+     +               
Sbjct: 240 SQIFESQPHKDLGAVLVDYLQKAAQFNLSIQELNVGGGLGIRYTEDDDPPTIDAWVKGVC 299

Query: 219 ------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVP 270
                     +    ++  EPG +I+        T+    E  +      VD  +  +  
Sbjct: 300 EAVVNACNQQQLPLPRLLSEPGRSIIGPACVTAYTIGSRKEIPQTRTYLAVDGGMSDNPR 359

Query: 271 DYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
                     +  N        T  + G+ C +GDI  +       + GD +       Y
Sbjct: 360 PITYQSVYRPVVANRMSAPITETVTIAGKHCESGDILLKDAQLPETQPGDLLVIMGTGAY 419

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           N +  + +N +  P   +         ++  +Y D   
Sbjct: 420 NYSMASNYNRVPRPAAVLVKDGTAELIVQRETYQDLIR 457


>gi|111018490|ref|YP_701462.1| diaminopimelate decarboxylase [Rhodococcus jostii RHA1]
 gi|110818020|gb|ABG93304.1| diaminopimelate decarboxylase [Rhodococcus jostii RHA1]
          Length = 473

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 58/406 (14%), Positives = 120/406 (29%), Gaps = 45/406 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +++D+    +              K+  A K F    +   +         +S  E
Sbjct: 64  GTPLFVVDEDDFRSRCRDMARAF-GPTAKVHYASKAFLCGEIARWVADEGLSLDVASGGE 122

Query: 63  VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F  E  A +   K       AV +    I+ ++ +++++    A +    + 
Sbjct: 123 LAVALHAGFPAERIAMHGNNKSVAELNAAVSARVGHIVLDSATEIDRLDKVAAEAGVVQD 182

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G         +  +    +    + GL  H   +
Sbjct: 183 VLIRVTVGVEAHTHEFISTAHEDQKFGFSLAGGKAIDAVRRVFAAGNLRLVGLHSHIGSQ 242

Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F          +      F  +    I  I LGGG+  +           +L  
Sbjct: 243 IFDVDGFELAAHRVIGLLRDVVAEFGVEKTAQISIIDLGGGMGISYVPSDDPPPVDQLAA 302

Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDIS------ENIKNLVIVDS 263
                              + +EPG AI    T     V  I          +  V VD 
Sbjct: 303 KLGDIVRNESALAGLPEPTLAVEPGRAIAGPGTVTLYEVGTIKDVTVGANLTRRYVSVDG 362

Query: 264 SVEAHVPDYLLYQESA----TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318
            +  ++   L   E      +   +  P  + V G+ C +GD+     +    +  GD +
Sbjct: 363 GMSDNIRTALYQAEYEAKLVSRVSDAAPVVSRVVGKHCESGDVVIRDTWMPEDIDAGDLL 422

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +      Y  +  + +N +  P +       +   +R  +  D  +
Sbjct: 423 AVAATGAYCYSMSSRYNLLARPAVVAVRDGQSRVILRRETVEDLLS 468


>gi|330813484|ref|YP_004357723.1| diaminopimelate decarboxylase [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327486579|gb|AEA80984.1| diaminopimelate decarboxylase [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 411

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 65/385 (16%), Positives = 130/385 (33%), Gaps = 24/385 (6%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+YL   ++L  N +      K+    +  A+K          L +   G    S+ E+
Sbjct: 27  TPFYLYSFEQLEYNFNFFHKSFKSINPLICFAVKSNTNLFFLKKLKKLGSGADVVSIGEL 86

Query: 64  MLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--KI 118
            L        +   ++   K  E  +   +     I   + +++N+    A+   K   I
Sbjct: 87  QLALKAGINAQKIVFSGVGKTKEELSYAVSKKILLINTESENEINEIIKIARSKKKIVTI 146

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENKS 171
           G+R+NP++S          +   + G               ++   + GL  H   + K 
Sbjct: 147 GIRLNPNISAKTNKKISTGKKSDKFGISLDRCFKILKKNSNNKNIKIEGLSVHIGSQIKE 206

Query: 172 FLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFSEK 224
              F   L  I K      +    I ++ LGGG+         ++ +K +   +  F++ 
Sbjct: 207 LAPFKKTLDVINKFLLKLKNEGITISYLDLGGGMGIPYSALETEFDLKKYANLVHAFNKN 266

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP 283
           +  +I  EPG  +  NT  L + V  + E      ++ D+++   +   L   +   +  
Sbjct: 267 HKCKIIFEPGRYMSANTALLVSKVTYVKEIQDRNFVILDAAMNDLMRPALYGAKHDILPI 326

Query: 284 NTGPYTAM----VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                         G  C + D F  ++    +K G  + F +V  Y  +  + +N   +
Sbjct: 327 QKDKKKFNRKIEFVGPICESTDKFITYNNYPRLKEGGYVCFTNVGAYGRSLSSNYNVRPL 386

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
                 N              D   
Sbjct: 387 AAEIAINKKSYTIIRPRQKLKDLIK 411


>gi|313893288|ref|ZP_07826863.1| putative diaminopimelate decarboxylase [Veillonella sp. oral taxon
           158 str. F0412]
 gi|313442184|gb|EFR60601.1| putative diaminopimelate decarboxylase [Veillonella sp. oral taxon
           158 str. F0412]
          Length = 418

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 65/393 (16%), Positives = 122/393 (31%), Gaps = 29/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+++ D++ ++ N+ + +     N G K   A+K      +   L +   G   SSL 
Sbjct: 21  PTPFHIYDEEGIIENMKSFINAFSWNKGFKQYFAVKATPNPYIMRVLQKLGVGADCSSLA 80

Query: 62  EVMLG-HEKFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E++L       G    +        E    L     I  + ++ +   +     L     
Sbjct: 81  ELLLCEKVGITGHDIMFTSNDTPYVEYKKALDMGAIINLDDITHIEYLEKHHGSLPDTFC 140

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVNGLMFHNNCENKSFLC- 174
           +R NP                ++ G   +   E+  +     V     H    +      
Sbjct: 141 VRYNPGSLKEGGNTIIGLPEEAKYGMTREQIFEAYKQLQAKGVKHFGIHTMVVSNELDID 200

Query: 175 -----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK----- 224
                                  +E+I LGGG+    K        + L +  E+     
Sbjct: 201 GLVGTAELCFNLAVDIKNELGINVEFIDLGGGVGVAYKPEQTPVDFKALSKGVEEAYNRI 260

Query: 225 ------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                   V +  E G  +      L +T +   +  ++ + +DS +   +   L     
Sbjct: 261 LVANGLNDVALAYECGRMVTGPFGYLVSTAIHKKDIYRHYIGLDSCMANLMRPALYGSYH 320

Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        + IGDRI   D   +  +    +
Sbjct: 321 HITVMGKEDAPKDHVYDVTGSLCENNDKFAIQRELPKIDIGDRIIIHDAGAHGHSMGFNY 380

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       + + DG++  IR   +Y+D +  L
Sbjct: 381 NGKLRSAELLLHKDGSVTQIRRAETYDDLFGTL 413


>gi|222824355|ref|YP_002575929.1| diaminopimelate decarboxylase [Campylobacter lari RM2100]
 gi|222539576|gb|ACM64677.1| diaminopimelate decarboxylase [Campylobacter lari RM2100]
          Length = 401

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 65/382 (17%), Positives = 119/382 (31%), Gaps = 21/382 (5%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+Y+ D  K+           K    ++  A+K  +   +   L     G    S  E+
Sbjct: 12  TPFYIYDFDKIKERFLLLKEAFKARKSQIFYAVKANSNLSVLKLLVSLDSGFDCVSAGEI 71

Query: 64  MLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
                         ++   K  D    A+  N   +   +  ++   +  A++  K   +
Sbjct: 72  YRALKAGAKNYKIIFSGVGKSADELKYALEQNILYVNLESYEEMLLLEQIAKESQKIARI 131

Query: 121 --RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKS 171
             R+NP+V              ++ G   +   +  I        +   + FH   +   
Sbjct: 132 SIRVNPNVDAKTHPYISTGLHENKFGVDIESAKKMYIYAKNSQFLDPVSVHFHIGSQILD 191

Query: 172 FLCFSAMLKNIEKEFGHFI---TQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEKY 225
                     + K     +     I++  +GGG+    KD     + D+ Q +    +  
Sbjct: 192 ISSIHEASVIVAKLVKELLVLKINIKFFDIGGGLGVCYKDEQEPNLYDYAQGILASLQGL 251

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
            V I +EPG  +V N     T VL     + K  VIVD ++   +   L          +
Sbjct: 252 DVCIGMEPGRFLVANAGEFITKVLYEKFNDKKRFVIVDGAMNDLLRPSLYSAYHEVKLLS 311

Query: 285 TGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
                    + G  C +GD   +       K GD I  +    Y  +  + +N  N    
Sbjct: 312 ENKEESLCDIVGGVCESGDFLAKDRKLAKTKAGDLIIVKSAGAYGFSMSSNYNTRNRVCE 371

Query: 343 AVKNVDGTIKAIREFSYNDYYN 364
                       +  SY D   
Sbjct: 372 LACENGMVRMIRKRESYEDQIA 393


>gi|254718034|ref|ZP_05179845.1| diaminopimelate decarboxylase [Brucella sp. 83/13]
 gi|265982981|ref|ZP_06095716.1| diaminopimelate decarboxylase [Brucella sp. 83/13]
 gi|306837594|ref|ZP_07470465.1| diaminopimelate decarboxylase [Brucella sp. NF 2653]
 gi|264661573|gb|EEZ31834.1| diaminopimelate decarboxylase [Brucella sp. 83/13]
 gi|306407301|gb|EFM63509.1| diaminopimelate decarboxylase [Brucella sp. NF 2653]
          Length = 421

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 62/389 (15%), Positives = 115/389 (29%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+  +  +  +         +    +  ALK  +   +   L +   G  + S  
Sbjct: 25  VGTPFYVYSRATIERHFRVFHDAFADMDTLVTYALKANSNQAVLAALAKLGAGADTVSEG 84

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKF--KDKAQKLHK 116
           E+              ++   K                   +  +L     +  A     
Sbjct: 85  EIRRALAAGIPANRIVFSGVGKTPREMDFALEARIYCFNVESEPELEILSARAVAAGKVA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
            + LRINP V           +  ++ G        +  +       NV G+  H   + 
Sbjct: 145 PVSLRINPDVDAKTHAKISTGKSENKFGIPRDKARAAYARAASLPGLNVVGIDMHIGSQI 204

Query: 170 KSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEF 221
                F      +    KE       I  + +GGG+            P   + + + + 
Sbjct: 205 IDLEPFDNAFALMAELVKELQADGHNIRHVDVGGGLGIPYRTDNTPPPPPVAYAEIVAKH 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES-- 278
            +   ++   EPG  IV N   L T V+ + E + KN VIVD+++   +   L       
Sbjct: 265 IKPLGLKTVFEPGRLIVGNAGLLVTEVIFVKEGDAKNFVIVDAAMNDLIRPTLYDAFHDI 324

Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                   N     A   G  C  GD  G          GD I+      Y     + +N
Sbjct: 325 RPVIMPNDNAPRIRADFVGPVCETGDYLGLDREVAKPAPGDLIAICTTGAYGAVLSSTYN 384

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    + + +         +Y +   
Sbjct: 385 SRLLIPEVLVDGERYHVVRPRRTYEELLA 413


>gi|227509663|ref|ZP_03939712.1| diaminopimelate decarboxylase [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227190879|gb|EEI70946.1| diaminopimelate decarboxylase [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 435

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 66/399 (16%), Positives = 126/399 (31%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           KTP  + D   + N +     + ++  V   +  A K FA   MF  +NQ        S 
Sbjct: 31  KTPLVVYDVSAIRNQIHHFQKVFEDNHVDYAVSYASKAFACIAMFQLVNQENVHIDVVSG 90

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK--LH 115
            E+       F  +  +++   K  E   +        II +   ++   K   +    H
Sbjct: 91  GELYTAIKAGFPMDHVSFHGNNKSVEELEMAVDHQIGVIILDNFHEIALLKQILKDKDAH 150

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
             + LR+ P VS          +  S+ G             + +  +   + G+  H  
Sbjct: 151 INVMLRVTPGVSAHTHEYDQTGQTDSKFGFDLQSGQARKALDEVLADQRMTMLGIHAHIG 210

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQI----EWISLGGGIHFTDKDYPVKD--------F 214
            +      F      +    G +  +I    + +++GGG      +              
Sbjct: 211 SQIFEVKGFELAATKLIDTVGQWHKEIGYVAKVVNVGGGFGIRYTEEDDPIAPEMFVDAI 270

Query: 215 CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            + +K+ + +       +++EPG +I         TV    +       V     +  ++
Sbjct: 271 VKAIKKRAGELALPMPAVWIEPGRSIAGPAGYNLYTVGSRKDVPGIRSYVTVDGGMGDNI 330

Query: 270 PDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   E   +  N        T  V G+ C +GDI  +       K GD ++      
Sbjct: 331 RPALYQAEYDAVLANDPKAPAKETVRVAGKYCESGDILIQKQALPQTKPGDVLAMLATGA 390

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y     + +N    P +          AIR  ++ D   
Sbjct: 391 YGYAMASNYNRNPRPAVIFVENGQDNLAIRRETFEDLIR 429


>gi|302554157|ref|ZP_07306499.1| diaminopimelate decarboxylase [Streptomyces viridochromogenes DSM
           40736]
 gi|302471775|gb|EFL34868.1| diaminopimelate decarboxylase [Streptomyces viridochromogenes DSM
           40736]
          Length = 463

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 65/398 (16%), Positives = 123/398 (30%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+                    +  A K F +  +   L++        S  E
Sbjct: 63  GTPAYVLDEADFRARARAWRTAFGQ-DADVFYAGKAFLSRAVVRWLHEEGLNVDVCSGGE 121

Query: 63  VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +          E  A++   K  D    AV +    I+ ++  ++ +    AQ L   +K
Sbjct: 122 LATALSAGMPAERIAFHGNNKSVDEITRAVEAGVGHIVLDSFQEIVRVAHIAQGLGKRQK 181

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + +RI   V               + G            +  ++ +   + G+  H   +
Sbjct: 182 VLIRITVGVEAHTHEFIATAHEDQKFGIPLAGGQAAEAVRRALQLDGLELVGIHSHIGSQ 241

Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F          ++        ++  I LGGG+               + +   +
Sbjct: 242 IFDMSGFEVAAHRVVSLLKDVRDEHGVELPEIDLGGGLGIAYTSDDDPREPHEIAKSLTE 301

Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271
                       + +I +EPG AIV  T      V  I      +  V VD  +  ++  
Sbjct: 302 IVTRECEAAKLRTPRISVEPGRAIVGPTAFTLYEVGTIKPLDGLRTYVSVDGGMSDNIRT 361

Query: 272 YLLYQESATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326
            L   E +        +  P  A V G+ C +GDI  +  F    V  GD ++      Y
Sbjct: 362 ALYDAEYSVALVSRTSDAAPMLARVVGKHCESGDIVVKDAFLPADVAPGDLVAVPATGAY 421

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N +  P +           +R  +  D   
Sbjct: 422 CRSMASNYNHVLRPPVVAVQGGEARAIVRRETEEDLLR 459


>gi|311745312|ref|ZP_07719097.1| diaminopimelate decarboxylase [Algoriphagus sp. PR1]
 gi|126577845|gb|EAZ82065.1| diaminopimelate decarboxylase [Algoriphagus sp. PR1]
          Length = 410

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 66/385 (17%), Positives = 124/385 (32%), Gaps = 25/385 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D  K+ + + T         +K+  A K      +   +        + S+ E
Sbjct: 23  GTPVYVYDGDKITSQIKTLQQAFSKVPLKIKYATKALTNVNILKVVKLAGGEVDAVSVQE 82

Query: 63  VMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           V L  E  F  E   Y        EI  V+     I  + +  L  F          + +
Sbjct: 83  VRLCLEAGFKAEDIMYTPNGVSLEEIKEVVELGAMINLDNLPVLELFGQT-YGHEVPVCI 141

Query: 121 RINPSVSYSKFILADPNRPFSRLGE------KCKDKIESEIKNVNGLMFHNNCENKSFLC 174
           RINP +              S+ G       +  + ++     V GL  H   +      
Sbjct: 142 RINPHIMAGGNAKISVGHIASKFGVSIHQLDEILELVKKYNIQVTGLHLHTGSDILDAEV 201

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV--------KDFCQRLKEFSEKYS 226
           F      +  E      +++++  GGG     K+  V            +   +F EKY 
Sbjct: 202 FLKSGNVL-FEAALKFPELKFLDFGGGFKVGYKEGDVVTDMMEVGNRVSEAFLKFCEKYG 260

Query: 227 V--QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQES---AT 280
              +++LEPG+ +V+   +L      + +  +   + V+S +   +   +          
Sbjct: 261 KKLELWLEPGKFVVSEAGSLLVQANVVKKTPQITFVGVNSGLNHLIRPMMYDAYHDVYNL 320

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
             P        V G  C   D          V++GD ++ ++   Y I+  + +N    P
Sbjct: 321 SNPEGEEKKYNVVGYICET-DTIAAERDIAEVRMGDFLAIKNAGAYGISMASNYNSRLRP 379

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              +          +   + D   N
Sbjct: 380 AEVLIWEGKARLIRKREEFEDLLRN 404


>gi|313896962|ref|ZP_07830509.1| putative diaminopimelate decarboxylase [Selenomonas sp. oral taxon
           137 str. F0430]
 gi|312974409|gb|EFR39877.1| putative diaminopimelate decarboxylase [Selenomonas sp. oral taxon
           137 str. F0430]
          Length = 425

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 61/393 (15%), Positives = 116/393 (29%), Gaps = 31/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+++ D+ K+  N            G +   A+K      +   L++   GT  SS+ 
Sbjct: 21  PTPFHIYDEGKIRANCRRLREAFAWAPGFREHFAVKALPNPRIVQLLHEEGAGTDCSSIA 80

Query: 62  EVMLG-HEKFGGETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++       GE           +     +     I  + ++ L+     A      + 
Sbjct: 81  ELLISEAAGVTGEEIMLTSNDTPFDEFQKSIELGAVINLDDITHLDYMAKHAGLPE--VL 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKI----ESEIKNVNGLMFHNNCENKSFLCF 175
                     +          ++ G      +     +    V     H    +      
Sbjct: 139 SFRYNPGDTIEGNDIIGKPVEAKYGLTHAQMLEGYARAREMGVRRFGLHTMVISAELRTE 198

Query: 176 ------SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
                   M +   +        +E+++LGGG     +          +    E+   +I
Sbjct: 199 AFLLTARIMFELAVELKEKLGIHVEFVNLGGGFGIPYRPEEDPVDFAAVGAGIERLYHEI 258

Query: 230 Y-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                        E G A+  +   L +TVL      K  V +DS +   +   L     
Sbjct: 259 MRPAELGDVAIRTESGRAVTGDAGWLVSTVLHKKNTYKKYVGLDSCMANLMRPALYGAYH 318

Query: 279 ATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        + IGD +   D   +       +
Sbjct: 319 HITVLGKEHAPADHVYDVTGSLCENNDKFAVDRALPQIDIGDIVVIHDTGAHGSAMGFNY 378

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       + + DGT++ IR   + +DY+  L
Sbjct: 379 NGKLHCAELLLHEDGTVELIRRAQTLDDYFATL 411


>gi|225377000|ref|ZP_03754221.1| hypothetical protein ROSEINA2194_02644 [Roseburia inulinivorans DSM
           16841]
 gi|225211136|gb|EEG93490.1| hypothetical protein ROSEINA2194_02644 [Roseburia inulinivorans DSM
           16841]
          Length = 426

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 62/391 (15%), Positives = 129/391 (32%), Gaps = 29/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +  N +        N G +   A+K      + + L +Y  G   SSL 
Sbjct: 20  PTPFHLYDEKGIRENAEAVKEAFAWNPGFREYFAVKATPNPFILNILKEYDCGCDCSSLT 79

Query: 62  EVMLGH-EKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+ML   + F G+   ++       E          I  +  + ++  +     + + I 
Sbjct: 80  ELMLADSQGFDGQHIMFSSNDTPAEEFAFADELGAIINLDDFTHIDFLEQTIGHIPETIS 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE---------SEIKNVN-GLMFHNNCEN 169
            R NP   +        N   ++ G   +  IE         ++   ++  L  +     
Sbjct: 140 CRYNPGGVFKMSNGIMDNPGDAKYGFTHEQIIEGFKILKEKGAKYFGIHAFLASNTVTNE 199

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS--- 226
                   + + + +        I++I+L GG+    +   + +  + + E   +     
Sbjct: 200 YYPKLAHQLFELVVELRDKTGCDIKFINLSGGVGIPYRPDQIPNDIRVIGEGVREAFEEI 259

Query: 227 --------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                   + IY E G  ++     L T  +      K  + VD+     +   +     
Sbjct: 260 LVPAGLGDISIYSEMGRFMLGPYGCLVTKAIHEKHTYKEYIGVDACAANLMRPAIYGAYH 319

Query: 279 ATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        + +GD +   D   +  +    +
Sbjct: 320 HITVMGKENEPCDHKYDVTGSLCENCDKFAIDRMLPKIDMGDLLVIHDTGAHGFSMGYNY 379

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   DG+ + IR   + +DY+ 
Sbjct: 380 NGRLRSAEILLKEDGSTQLIRRAETPDDYFA 410


>gi|172036266|ref|YP_001802767.1| diaminopimelate decarboxylase [Cyanothece sp. ATCC 51142]
 gi|171697720|gb|ACB50701.1| diaminopimelate decarboxylase [Cyanothece sp. ATCC 51142]
          Length = 476

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 50/405 (12%), Positives = 116/405 (28%), Gaps = 43/405 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK---NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P Y++D+  L           +       +++ A K ++   +   + +   G    S
Sbjct: 62  GSPLYILDEMTLRTACRQYRDNFQTYYKGESQVIYASKAWSCLAVVGVIARENLGFDVVS 121

Query: 60  LYEV---MLGH-------EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109
             E+              ++   + + +     + E+   +    TII +   +L     
Sbjct: 122 GGELYTTQKALTQLGYSCQEIAKKIYFHGNNKSEAELKEAIKVGCTIIVDNWLELQTLAQ 181

Query: 110 K---AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVN 159
                  L   I +R+ P +              S+ G              +    +  
Sbjct: 182 LGNDTPNLTIPILIRLTPGIECHTHEYIRTGHLDSKFGFDPNQLEAVFTYISQQTSLDCR 241

Query: 160 GLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQ 216
           GL  H   +         +   + +       +   +  +++GGG+     +       +
Sbjct: 242 GLHAHIGSQIFERQPHQDLAGVLVEWLKIGREYGLNLSELNIGGGLGICYTEEDDPPSIE 301

Query: 217 RL-----------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS- 264
                         +  E    ++  EPG +++ +      TV    E  +    +    
Sbjct: 302 EWVKAVSEAVMKACQRCEIDLPKLIAEPGRSLIGSACVTAYTVGSRKEIPELRTYIAVDG 361

Query: 265 -VEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319
            +  +              A         T  + G+ C +GDI  +         GD + 
Sbjct: 362 GMSDNPRPITYQSLYRVALANRMSAEISETVTIAGKHCESGDIVIKDAQLPQTHPGDILV 421

Query: 320 FEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
                 YN +  + +N +  P   + N       +R  +Y+D   
Sbjct: 422 IMGTGAYNYSMASNYNRLPRPAAVMVNQGEANLIVRRETYDDLIR 466


>gi|260435338|ref|ZP_05789308.1| diaminopimelate decarboxylase [Synechococcus sp. WH 8109]
 gi|260413212|gb|EEX06508.1| diaminopimelate decarboxylase [Synechococcus sp. WH 8109]
          Length = 459

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 48/396 (12%), Positives = 112/396 (28%), Gaps = 34/396 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP Y++D+  +           +         + A K  ++  M         G  + S
Sbjct: 52  GTPLYVLDEATVRATCRAYRQALEKHYAGPSLPIYASKANSSLVMSSLAASEGLGLDAVS 111

Query: 60  LYEVMLGHEK-FGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLH 115
             E++        GE    +     D E+    +N  TI+ +    L++  +   A    
Sbjct: 112 AGELLTALHGGMPGERMVLHGNNKSDEELLLAYANKVTIVVDNQHDLDRLAELVPAGAEP 171

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168
            ++ LR  P +              S+ G             +      + GL  H   +
Sbjct: 172 ARLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQVEPVLRSLVGQPWSQLTGLHAHIGSQ 231

Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK- 224
                    +   +  +          +  +++GGG+     +       ++  +   + 
Sbjct: 232 IFELEPHQDLAAVMADKLKLARDLGHPVSDLNVGGGLGIRYVESDDPPSIEQWIQVVAEA 291

Query: 225 ----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDY 272
                        ++  EPG ++V        +V              +D  +  +    
Sbjct: 292 VTSACQERGLELPRLMCEPGRSLVATAGVTLYSVGSRKTIPNVRTYVAIDGGMSDNPRPI 351

Query: 273 LLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
                      +        +  + G+ C +GD+  +       + GD ++      YN 
Sbjct: 352 TYQSLYTCCLADRPLAKPDESVNLVGKHCESGDVLLKNLALPTTESGDIVAVFATGAYNA 411

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +  + +N I  P   + +        +    +D   
Sbjct: 412 SMSSNYNRIPRPAAVLVHDGAAELVQKREQPDDLLR 447


>gi|262341097|ref|YP_003283952.1| diaminopimelate decarboxylase [Blattabacterium sp. (Blattella
           germanica) str. Bge]
 gi|262272434|gb|ACY40342.1| diaminopimelate decarboxylase [Blattabacterium sp. (Blattella
           germanica) str. Bge]
          Length = 412

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 63/386 (16%), Positives = 109/386 (28%), Gaps = 27/386 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR-KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP Y+ D  K+            K     +  A K      +   L Q   G  + S+ 
Sbjct: 24  GTPLYIYDSCKIKKQYIKMKNAFGKIKNFIINYACKANTNLNILKFLQQLGSGLDTVSIQ 83

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLHKKIG 119
           EV LG    F  +   +       +      +    I  + +S L +F +     +  IG
Sbjct: 84  EVELGLKAGFHPKKIIFTPNCVSIQEIKKAVDFGVRINLDNLSILEQFGE--YYPNYSIG 141

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCENKSFL 173
           +RINP +              S+ G         +         + G   H   +     
Sbjct: 142 IRINPHIMAGGNSKISVGHIDSKFGISYYQIPHMKRILKNTGLKIEGFHMHTGSDISDIK 201

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI---- 229
            F      I  +       +++I  G G     K   +K     L     +         
Sbjct: 202 SFLE-GAKILFQTAIDFPNLDYIDFGSGFKVPYKKNDIKTNLTSLSHSITEKFKNFCQSY 260

Query: 230 ------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
                   EPG+ +V+ +      V  I      +     S   H    + Y     I  
Sbjct: 261 GSQIALIFEPGKFLVSESGYFLVHVNVIKHTTSTVFAGVDSGFNHFLRPMFYNAYHCIEN 320

Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            + P        V G  C + D FG     + ++ GD +  ++   Y  +  + +N    
Sbjct: 321 ISNPNGRFRFYTVVGYICES-DTFGLNRKIQEIREGDILCMKNAGAYCFSMSSNYNSRYR 379

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365
           P              +  +  D   N
Sbjct: 380 PAEVFIFQGKDFLIRKRETMQDLLRN 405


>gi|297202382|ref|ZP_06919779.1| diaminopimelate decarboxylase [Streptomyces sviceus ATCC 29083]
 gi|197710099|gb|EDY54133.1| diaminopimelate decarboxylase [Streptomyces sviceus ATCC 29083]
          Length = 463

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 64/398 (16%), Positives = 123/398 (30%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+                    +  A K F +  +   L++        S  E
Sbjct: 63  GTPAYVVDEADFRARARAWRTAF-GHDADVFYAGKAFLSRAVVRWLHEEGLNLDVCSGGE 121

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +          +  A++   K  +    AV S    I+ ++  ++ +    AQ L K+  
Sbjct: 122 LATALSAGMPADRIAFHGNNKSTQEITRAVESGVGRIVLDSFQEIVRVAHIAQSLGKRQR 181

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
             +RI   V               + G            +  ++ +   + G+  H   +
Sbjct: 182 VQIRITVGVEAHTHEFIATAHEDQKFGIPLAGGQAAEAVRRALKLDGIELIGIHSHIGSQ 241

Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F          ++        ++  I LGGG+               + +   +
Sbjct: 242 IFDMSGFEVAAHRVVGLLKDVRDEHGVELPEIDLGGGLGIAYTSDDDPREPHEIAKALTE 301

Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271
                       + +I +EPG AIV  T      V  I      +  V VD  +  ++  
Sbjct: 302 IVTRECEAARLRTPRISVEPGRAIVGPTAFTLYEVGTIKPLDGLRTYVSVDGGMSDNIRT 361

Query: 272 YLLYQESATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326
            L   E          +  P  A V G+ C +GDI  +  F    +  GD I+      Y
Sbjct: 362 ALYDAEYTVALVSRTSDAEPMLARVVGKHCESGDIVVKDAFLPADLAPGDLIAVPATGAY 421

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N +  P +   +   +   +R  +  D   
Sbjct: 422 CRSMASNYNHVLRPPVVAVHDGESRVIVRRETEEDLLR 459


>gi|260655042|ref|ZP_05860530.1| diaminopimelate decarboxylase [Jonquetella anthropi E3_33 E1]
 gi|260630153|gb|EEX48347.1| diaminopimelate decarboxylase [Jonquetella anthropi E3_33 E1]
          Length = 452

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 53/392 (13%), Positives = 115/392 (29%), Gaps = 30/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D+ +L       +   K     +  A K F    M   ++    G    SL E
Sbjct: 52  GTPLYVFDEAELRRRCRRLVESVKKYDADVYYAGKAFLPLAMAQLVSSEGMGLDVVSLGE 111

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI- 118
           + L             +     ++    A+      I+ ++  +L      A+       
Sbjct: 112 LALALSAGISAGRIELHGNAKTEELLSRALRLGVGRIVVDSADELELLGRLAKNEKTPPK 171

Query: 119 -GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENK- 170
             LR++P ++              + G      + +  +       + GL  H   +   
Sbjct: 172 ILLRVSPGIAAGAHHAIQTATDDCKFGFSPAQLVHAVKRAADLPVVLAGLHVHLGSQIDR 231

Query: 171 ---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP---------VKDFCQRL 218
               F     M+  +         + + + LGGG      + P         +    +  
Sbjct: 232 LEPFFEGVQTMVDLLASLKNACGFEADEMDLGGGFAVRSPEGPLDAGDFIEKICLRAKSA 291

Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLYQ 276
              +     ++  EPG  + +        V  + E     +       +  +    L   
Sbjct: 292 SSAAGLRLPRLSFEPGRWVSSPACVTVYRVQSVKETTSGRIYAALDGGMTDNPRPCLYGA 351

Query: 277 ESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
             + +  ++       T  + G  C +GD+         ++ GD ++  D   Y  +   
Sbjct: 352 PYSPVLVSSADERKEGTVTLAGCCCESGDVLVSDAVMPELRRGDLVALPDTGAYTYSMFM 411

Query: 333 WFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            +NG   P +   +       +R ++  D   
Sbjct: 412 TYNGAFRPAVVFVSSGTARLVVRRWNEGDLLK 443


>gi|325528845|gb|EGD05893.1| diaminopimelate decarboxylase [Burkholderia sp. TJI49]
          Length = 412

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 58/400 (14%), Positives = 123/400 (30%), Gaps = 46/400 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   + + +             +  A K  +   +   + +      + SL E
Sbjct: 16  GTPLWVYDADVIRDRIAQLRQFDV-----IRYAQKANSNLHILKLMREAGACVDAVSLGE 70

Query: 63  VMLGHEKF-----GGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHK 116
           +              E   +     D    A +  +  T+   ++  L +  ++A     
Sbjct: 71  IERSLAAGFSPAGEPEGVVFTADLIDRPTLAAVLKHGVTVNAGSLDMLARVGEQA--PGH 128

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170
           ++ LR+NP   +      +   P S+ G    D       +      + G+  H      
Sbjct: 129 RVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVRQYGLKLVGIHMHIGSGVD 188

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEF 221
            +   S +   +          I+ IS GGG+               Y  +    R +  
Sbjct: 189 -YGHLSQVCDAMVDLVTSLGHDIDAISAGGGLSIPYRDGEPRVDVDHYFKQWDAARKRIE 247

Query: 222 SE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279
               ++V+I +EPG  +V    TL T V  ++   K+  + +D+     +   +     A
Sbjct: 248 RHLGHAVRIEIEPGRFLVAEAGTLVTEVQAVNRRPKHDFVLIDAGFNDLMRPSMYGSYHA 307

Query: 280 TIYPNTGP--------YTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324
                               + G  C +GD+F +              +IGD +   D  
Sbjct: 308 VSVHAHDGALPEGRPLVDIAIAGPLCESGDVFTQDAGGVVTHRRLAQPQIGDLLFLHDAG 367

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            Y  +  + +N   +    + +        R  + ++   
Sbjct: 368 AYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIDELLA 407


>gi|257126124|ref|YP_003164238.1| diaminopimelate decarboxylase [Leptotrichia buccalis C-1013-b]
 gi|257050063|gb|ACV39247.1| diaminopimelate decarboxylase [Leptotrichia buccalis C-1013-b]
          Length = 436

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 73/401 (18%), Positives = 132/401 (32%), Gaps = 38/401 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           KTP Y++D++ +   +D      K      ++  A K F + GM   +          S 
Sbjct: 30  KTPLYVMDQEFIETTIDKMKKAFKSSRFNTRIAYAGKAFLSTGMIKLVESKGLDLDVVSG 89

Query: 61  YEVMLG-HEKFG-GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F   + H +       EI+ AV    DTI+ +   +++K +   ++  KK
Sbjct: 90  GELYTAYKAGFPMNKVHLHGNNKLVNEIEMAVDFGIDTIVVDNEDEIDKIERICREKGKK 149

Query: 118 IGLRINPSVS--YSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
             + +                +   S+ G            K   +SE     G   H  
Sbjct: 150 QAVLVRIDPGIEAHTHHYIKTSGLTSKFGISLFQDNLFDIIKRLNDSEWIEFKGFHTHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            +      F   L  I K            +  +++GGG     K+       + +    
Sbjct: 210 SQIFQSAFFIFALDEIFKYLDKLKKELGIVVHTVNMGGGFGVYYKEGDDPKPIEEVLSEI 269

Query: 223 EKYSVQI-----------YLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
             Y+  +            +EPG +IV N  T    V  I E +  K  V +D  +  ++
Sbjct: 270 ITYTEAMEIKYQIGFKELCIEPGRSIVGNAGTTLYEVGGIKETVGGKTYVFIDGGMSDNI 329

Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVA 324
              L   E      N    T      + G+ C +GDI  E        ++GD ++     
Sbjct: 330 RTALYQAEYEAGVVNKINDTDVKDVTLAGKLCESGDIIIEKGKLPKSTEVGDIVAVTTTG 389

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            Y     + +N +  P +          A++  + +D   N
Sbjct: 390 AYCYTMSSNYNRMMRPAVVFVKDGKAKVAVKRETLDDLIRN 430


>gi|226356218|ref|YP_002785958.1| diaminopimelate decarboxylase [Deinococcus deserti VCD115]
 gi|226318208|gb|ACO46204.1| putative Diaminopimelate decarboxylase (DAP decarboxylase)
           [Deinococcus deserti VCD115]
          Length = 379

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 60/369 (16%), Positives = 111/369 (30%), Gaps = 21/369 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D  +L   L            ++  A+K      +   L     G    S  E
Sbjct: 16  GTPLYVYDAAELDAALGRVRAAFG--DARVHYAMKANPNLHLLRRLQAAGVGFECVSPGE 73

Query: 63  VMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           +         G +      A  D E  A      T + +   ++            +  +
Sbjct: 74  IARAEHLGVAGEKLIINGPAKSDAEYAAGARLGATFVVDREEEVGLL-----PSGSRALV 128

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174
           R+NP++S S           S+ G   +        + +      GL  H     +    
Sbjct: 129 RVNPALSVSTHDHLATGSEGSKFGVTLEQAPRVLEALRTAGHTALGLHVHIGSAIRDAAD 188

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
           F+A    +          +  +  GGG         +    +     +  +  Q+++EPG
Sbjct: 189 FTAAFGRLSDLRSQTGP-LAVLDAGGGWGLGA---DLPGIAREAHAAAAVFGAQLWVEPG 244

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP--YTAMV 292
             +V    TL T V+      +  V+VD+ +   +   L   E        G       V
Sbjct: 245 RYLVAQAGTLLTRVVGTKRTGRPFVLVDAGMTELMRPMLYGAEHPVTPLWEGAGHSCWDV 304

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352
            G +C +GD+            GD ++  +   Y       +   + P   + N D    
Sbjct: 305 AGPACESGDLLARAVTLPTPSRGDLLAIGEAGAYGAAMSGTYLTRSRPAEVLWNGDEWHL 364

Query: 353 AIREFSYND 361
             +  +  D
Sbjct: 365 IRKRETPQD 373


>gi|289523768|ref|ZP_06440622.1| diaminopimelate decarboxylase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503460|gb|EFD24624.1| diaminopimelate decarboxylase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 425

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 60/399 (15%), Positives = 114/399 (28%), Gaps = 36/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++ K  + +           + A  +   A K F    M   + +   G    S 
Sbjct: 20  GTPLYVVSKSIIKDRCREIRDDFLNRYANSRAYYAGKAFLTIAMCRLIKKEGLGLDVVSG 79

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E  L  +  F       +   K  +            I+ +   +L+   + A      
Sbjct: 80  GEFHLALKANFPAANIVLHGNNKLRQEIETAIDRGVGRIVVDWEGELDLIDEIASSKGRR 139

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCE 168
             + LR+ P V              S+ G   +         +  E   + GL FH   +
Sbjct: 140 APVLLRVTPEVEALTHKYIQTGHRGSKFGIPLERVPYLAEKSLSMEHIALKGLHFHLGSQ 199

Query: 169 NKSFLCFSA----MLKNIEKEFGHFITQIEWISL-----------GGGIHFTDKDYPVKD 213
            +    +      + + +          +E + +                 +    PV +
Sbjct: 200 IEDHRPYVQAIDVVTELMANLESDKGFILEELDIGGGFGIGAHGDASSKPLSYFVDPVME 259

Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271
             +            + +EPG  +V        T+  I E   +   V     +  +   
Sbjct: 260 RLRARCSAFGVPLPSVAIEPGRWVVGEAGITLYTIGAIKEITGSTTYVSVDGGMADNPRP 319

Query: 272 YLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326
            L   +                  V GR C +GDI  E       VK GD ++  +   Y
Sbjct: 320 ALYGAKYDAEVVGKEGLPKDRIVTVAGRCCESGDILIENLSVPGDVKPGDLLAVFNTGAY 379

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           N +  + +N +  P +          A+   +Y+D    
Sbjct: 380 NYSMASNYNMLPKPAVVFVENGKDFLAVDRETYDDLLAK 418


>gi|34541757|ref|NP_906236.1| diaminopimelate decarboxylase [Porphyromonas gingivalis W83]
 gi|34398075|gb|AAQ67135.1| diaminopimelate decarboxylase [Porphyromonas gingivalis W83]
          Length = 382

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 72/381 (18%), Positives = 121/381 (31%), Gaps = 35/381 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTP+Y  D   L   L           V +  ALK      +  T+     G    S  
Sbjct: 1   MKTPFYFYDLTLLERTLSALARSAGRHDVAIHYALKANNHPRILQTVAAAGFGADCVSGG 60

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116
           E+    E  F      +    K  E   +         +  +V +L   +  A   +   
Sbjct: 61  EIEAAIEAGFPASDIFFAGVGKSDEEILLSLEARIGAFVVESVPELLNIERLAGSKNDIA 120

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV-------NGLMFHNNCEN 169
            I LR+NP V              ++ G   +D +      +        GL FH   + 
Sbjct: 121 PILLRLNPEVDAHTHSHITTGLAENKFGLLPEDALALMPHLLQSGSLVWRGLHFHIGSQI 180

Query: 170 KSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKE 220
           +S   F  + +   +    F       + I +GGG+                 + +R + 
Sbjct: 181 RSAKVFEKLCEKTNRILASFRTAGYSPDIIDMGGGLGINYDEPEAEPIPDFATYIERYRR 240

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESA 279
             E    ++++EPG ++V    +L T VL I E   K   IVD+ +   V   L      
Sbjct: 241 MIETGEARLHIEPGRSVVAQCGSLITQVLYIKEGKAKKFAIVDAGMTDLVRPALYEAHHQ 300

Query: 280 TIYPNTGPYT-------------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
                 G +T               V G  C + D+F        +K GD ++      Y
Sbjct: 301 IRLVQPGEWTMRATSPSAALTEKYDVVGPICESSDVFERELLMPELKRGDYLAIRSAGAY 360

Query: 327 NINRKNWFNGINMPTIAVKNV 347
                + +N   +P     + 
Sbjct: 361 GAVMASSYNMRPLPGSLFSDE 381


>gi|300869785|ref|YP_003784656.1| diaminopimelate decarboxylase [Brachyspira pilosicoli 95/1000]
 gi|300687484|gb|ADK30155.1| diaminopimelate decarboxylase [Brachyspira pilosicoli 95/1000]
          Length = 412

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 55/387 (14%), Positives = 120/387 (31%), Gaps = 23/387 (5%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           + KTP+Y+  K  +L  +     +  +     ++ A+K      +   + +   G    S
Sbjct: 22  VYKTPFYIYSKNDILQKIRFLKNVFSDIENHSIVYAIKAENNLSILKMMIEEGIGGDVVS 81

Query: 60  LYE-VMLGHEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHK 116
           + E +         E   ++   K  E        N       ++ +  +    A++L +
Sbjct: 82  IGETLKYIKAGGKAENIVFSGVAKTEEEIRKSIELNIKRFNIESIPEAIRINSIAKELKR 141

Query: 117 K--IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-----NVNGLMFHNNCEN 169
           +    +R+NP++              ++ G   K   E+        N+       +  +
Sbjct: 142 RVKCSIRVNPNIDAHTHEKITTGINGNKFGISIKTIRENANMLKSLDNIEIDSLSMHIGS 201

Query: 170 KSFLCFSAMLKNIEKE-----FGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKE 220
           +           +               I  I +GGG           +    F +    
Sbjct: 202 QMVDAEPFYKAILVMRDLIAEVNSLGFNITNIDIGGGFGVRYNRAHSGFDFDKFKKDSIS 261

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL--YQE 277
             +   + +  EPG   V  +  L   V  I E +     + D  +  +V   +   Y E
Sbjct: 262 LLKDMKLSVTTEPGRYFVAESGALIMRVEYIKEELSRKYAILDGGMNDYVRVAMYEAYNE 321

Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
              +            G  C + D+F      + +K GD ++  D   Y  +  + +N  
Sbjct: 322 IMPLVKTDKYSNYDFVGPICESSDVFANDRECETLKEGDYVALLDAGAYGFSMASNYNSR 381

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
            + +  + + D      +  S+ D   
Sbjct: 382 PLISQVMIDKDKHYIIRKRQSFEDMIK 408


>gi|294085433|ref|YP_003552193.1| diaminopimelate decarboxylase [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292665008|gb|ADE40109.1| diaminopimelate decarboxylase [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 419

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 53/389 (13%), Positives = 113/389 (29%), Gaps = 24/389 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+     + +              K+  A+K  +A G+   L     G    S  E
Sbjct: 27  DSPLYVYSGAGIRDAYRDFAAAIAPVNGKVHFAMKANSALGVLALLAHEGAGADIVSGGE 86

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +              ++   K        + +N   I   + +++      A+ +     
Sbjct: 87  LSRALAAGISASDIVFSGVGKSKAEIEQALAANIGQINAESPAEVAMISAVAKSMGVVAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170
           + LR+N  V+          +  ++ G            ++ +   ++       +  ++
Sbjct: 147 VALRVNVDVNAKTHAKISTGQRDTKFGISTDQNEAADLYRVMAADPHITPSGLAVHIGSQ 206

Query: 171 SFLCFSAMLKNIE-----KEFGHFITQIEWISLGGGIHFTDKD---YPVKDFCQRLKEFS 222
                                     ++  + LGGG+              + + +    
Sbjct: 207 LRDMAPFETAYTALLDLGMALRADGLEVPVLDLGGGVGVDYDHATPTDFTAYGEMVTRIF 266

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATI 281
            K   +   EPG AIV N   L T V+ I + + K  VIVD+++   +   L     + +
Sbjct: 267 NKSDFKFGFEPGRAIVANNGVLLTKVIFIKDGDNKRFVIVDAAMNDLLRPTLYEAHHSIV 326

Query: 282 YPNTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
                      A + G  C  GD  G       +   D ++      Y     + +N   
Sbjct: 327 PVLPAGSDIGLADIVGPVCETGDYIGRGRMMPALASDDLLAVLSAGAYGAVMASAYNTRP 386

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYNNLS 367
                +       +   + +   Y    S
Sbjct: 387 PAGEVLVLDGAIHELRAKRTVESYLAEES 415


>gi|260911755|ref|ZP_05918329.1| diaminopimelate decarboxylase [Prevotella sp. oral taxon 472 str.
           F0295]
 gi|260634127|gb|EEX52243.1| diaminopimelate decarboxylase [Prevotella sp. oral taxon 472 str.
           F0295]
          Length = 387

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 59/373 (15%), Positives = 133/373 (35%), Gaps = 27/373 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALY-IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           + TP+Y  D+  L   LD     + ++    +  A K  A   +   + +   G    S 
Sbjct: 12  LPTPFYYYDEGLLRATLDALNEQVARHPNFIVHYATKANANLRILQIIKEAGLGVDCVSG 71

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  +   +    K       A+ +N       ++ +L   +    +++++
Sbjct: 72  GEIETALRAGFKADNIVFAGVGKSDWEIKLALENNIFCFNVESIQELEVIEQLCSEMNQQ 131

Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE 168
             + LR+NP+V+             ++ G          +    ++  +  GL FH   +
Sbjct: 132 ADVCLRVNPNVNAHTHKNITTGLAENKFGIPVESVWEGIEKIQATKHVHFIGLHFHIGSQ 191

Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD---YPVKDFCQRLKEFS 222
                 F      + ++ +       + E I++GGG+     D   +P+ DF      ++
Sbjct: 192 IVNLNDFRELCTSVNSLLELLKQHNIEPEHINVGGGLGIDYDDPTSHPIPDFKAYFDMYA 251

Query: 223 EKYS----VQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQE 277
           +        +++ E G ++V     L + VL + +   K  +I+D+ +   +   L + +
Sbjct: 252 QHLQLNERQKVHFELGRSLVGQCGYLVSRVLYVKQGQSKRFLILDAGMNDLLRPALYHAK 311

Query: 278 SATIY---PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
              +    P+       V G  C + D+F           GD ++      Y     + +
Sbjct: 312 HQIVNLSNPSATSEVYDVVGPVCESSDVFSRDVLLPQSHRGDLMAICSAGAYGEVMASQY 371

Query: 335 NGINMPTIAVKNV 347
           N   +P   + + 
Sbjct: 372 NCRQLPKSYLSDD 384


>gi|146294666|ref|YP_001185090.1| diaminopimelate decarboxylase [Shewanella putrefaciens CN-32]
 gi|145566356|gb|ABP77291.1| diaminopimelate decarboxylase [Shewanella putrefaciens CN-32]
 gi|319427902|gb|ADV55976.1| diaminopimelate decarboxylase [Shewanella putrefaciens 200]
          Length = 414

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 58/382 (15%), Positives = 108/382 (28%), Gaps = 23/382 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  A   + + L +   G    S  E
Sbjct: 26  GTPLYIYSRATLERHWHAFNNAVMDHPHLICYAVKANANLAVLNVLARLGSGFDIVSGGE 85

Query: 63  -VMLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
              +           ++   K       A+          + ++L +    A +L K   
Sbjct: 86  LARVIEAGGSPAKVVFSGVGKTVAEMEQALNLGIYCFNVESSAELEQLNLVAGRLGKVAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           + LRINP V              ++ G    +               V G+  H   +  
Sbjct: 146 VSLRINPDVDAGTHPYISTGLKENKFGIAMDEAEIVFARAHALPHLKVKGVDCHIGSQLT 205

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
               F   +  +             IE   +GGG+  T  D        +   L +    
Sbjct: 206 EIQPFLDAMDRMLALIDRLAEQGIVIEHFDVGGGLGVTYDDETPPHPDVYAAALLKRLGN 265

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQE---SAT 280
             +++  EPG AI  N     T VL +   + K   IVD ++   +   L          
Sbjct: 266 RKLKLIFEPGRAIAANAGIFVTQVLYLKENSDKRFAIVDGAMNDLIRPALYSAWQNIIPV 325

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              ++  Y   + G  C  GD  G+            ++      Y     + +N     
Sbjct: 326 APRDSEAYEFDIVGPVCETGDFLGKERKLALAAGD-LLAVRSSGAYGFAMASNYNTRPRA 384

Query: 341 TIAVKNVDGTIKAIREFSYNDY 362
              + + +           +  
Sbjct: 385 AEVMVDGEHAFLVREREKISQL 406


>gi|254209204|ref|ZP_04915551.1| iron-sulfur cluster-binding protein, rieske family/putative
            carboxynorspermidine decarboxylase [Burkholderia mallei
            JHU]
 gi|147750427|gb|EDK57497.1| iron-sulfur cluster-binding protein, rieske family/putative
            carboxynorspermidine decarboxylase [Burkholderia mallei
            JHU]
          Length = 1083

 Score =  206 bits (525), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%)

Query: 2    IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            + TP ++ D++ L + L +   +  ++G +LL  LK F+  G  + +  ++DG  +SS +
Sbjct: 703  LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 762

Query: 62   EVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E           G  H    A +D ++  ++ NCD +  N++SQ  +  D A       G
Sbjct: 763  EAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 821

Query: 120  LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173
            LRINP  S       DP RP S+LG                +  + G+ FH NC++  F 
Sbjct: 822  LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 881

Query: 174  CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
              +  ++++EK     +  + WI+LGGG       Y  +      K   E + V +++EP
Sbjct: 882  RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 940

Query: 234  GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291
            G AIV    T+  +V+D+ ++    + V  +   H P+   YQ    +  +     +  +
Sbjct: 941  GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 1000

Query: 292  VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
            + G SCLAGD+FG + F+ P+++G R++F +   Y + + + FNGIN+P++  +  DG +
Sbjct: 1001 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1060

Query: 352  KAIREFSYNDYYN 364
             A++ FSY D+  
Sbjct: 1061 AAVQRFSYEDFLR 1073


>gi|296138956|ref|YP_003646199.1| diaminopimelate decarboxylase [Tsukamurella paurometabola DSM
           20162]
 gi|296027090|gb|ADG77860.1| diaminopimelate decarboxylase [Tsukamurella paurometabola DSM
           20162]
          Length = 453

 Score =  206 bits (525), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 58/415 (13%), Positives = 115/415 (27%), Gaps = 54/415 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ID+    +          +    +  A K F +  +   +          S  E
Sbjct: 36  GTPLFVIDEDDFRDRCRAMRDAFGD-DAAVHYASKAFLSMEIARWVRDEGLNLDVCSGGE 94

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           + +     F  +  A +   K               I+ +++S++ +    A  +   + 
Sbjct: 95  LAIALRAGFPADRIALHGNNKSVAELDYAVASGIGHIVIDSLSEIARLDAIAGERGSVQD 154

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK-------------DKIESEIKNVNGLMFH 164
           + +R+ P V               + G                    E++   + GL  H
Sbjct: 155 VLIRLTPGVEAHTHEFISTAHEDQKFGFSLASNEGDSPAMRAVTAVFEADNIRLVGLHSH 214

Query: 165 NNCENKSFLCFSAMLKNIEKEFGHFI--------TQIEWISLGGGIHFTDKDYPVKDFCQ 216
              +      F    + + +     +         Q+  I LGGG+              
Sbjct: 215 IGSQIFDVDGFEIAARRVLELLRDIVTRFGAEKTAQLNTIDLGGGLGIAYTAADDPPPVA 274

Query: 217 RLKEFSEK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDI-----------SEN 254
            L                  +  + +EPG AI          V  I              
Sbjct: 275 DLAAKLRNIVETESAALGLQTPHLAVEPGRAIAGPPGITLYEVGTIKDVVLDGKDERDPA 334

Query: 255 IKNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK 310
            +  V VD  +  ++   L   E     A   P   P  + + G+ C  GDI        
Sbjct: 335 FRRYVSVDGGMSDNIRPALYGAEYTVAIADRDPEGAPVPSRIVGKHCETGDILVRDTTTP 394

Query: 311 P-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  GD ++      Y  +  + +N    P +           +R  + +D  +
Sbjct: 395 DGLAEGDLLAVAATGAYCYSMSSRYNMQPRPAVVAVKDGAARLILRRETVDDLVS 449


>gi|75907135|ref|YP_321431.1| diaminopimelate decarboxylase [Anabaena variabilis ATCC 29413]
 gi|75700860|gb|ABA20536.1| diaminopimelate decarboxylase [Anabaena variabilis ATCC 29413]
          Length = 464

 Score =  206 bits (525), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 54/395 (13%), Positives = 114/395 (28%), Gaps = 33/395 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P Y++D++ L           +       ++L A K +    +         G    S
Sbjct: 61  GSPLYILDEETLRTACQQYRDGFQKYYPGESQVLYASKAWNCLAVCAIAGSEGLGIDVVS 120

Query: 60  LYEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ-KLHK 116
             E+           + + +       E+   + +  TI+ +   +L             
Sbjct: 121 GGELYTALAAGVSPAKIYLHGNNKSREELILAIESGVTIVADNWYELRTLASLTHTDQPV 180

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCEN 169
           +I LR+ P +              S+ G    D         +    N  GL  H   + 
Sbjct: 181 RIMLRLTPGIECHTHEYIRTGHLDSKFGFDPNDLAEVFEFVSQQPNLNCVGLHAHIGSQI 240

Query: 170 KSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTD-KDYPVKDFCQRLKEFSEKY 225
                   +   + +       +   +  +++GGG+     +        + +K   E  
Sbjct: 241 FERQPHRDLAAVMVQWLRDANKYGLNVTELNVGGGLGIKYVESDDPPSIDEWVKAICEVV 300

Query: 226 SVQIYLE----------PGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDYL 273
                 E          PG +++  +     TV        I+  V +D  +  +     
Sbjct: 301 QSACAAENLPLPKLLSEPGRSLIATSCVTAYTVGSSKTIPEIRTYVSIDGGMSDNPRPIT 360

Query: 274 LYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
                    A     +   T  + G+ C +GDI  +       + GD +       YN +
Sbjct: 361 YQSVYRAVIANKLSVSHTETVTIAGKHCESGDILIKNAQLPKTEPGDILVVMATGAYNYS 420

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             + +N +  P   V         ++  +Y D   
Sbjct: 421 MASNYNRLPRPAAVVVANGEANLILQRETYQDLIR 455


>gi|254250170|ref|ZP_04943490.1| Diaminopimelate decarboxylase [Burkholderia cenocepacia PC184]
 gi|124876671|gb|EAY66661.1| Diaminopimelate decarboxylase [Burkholderia cenocepacia PC184]
          Length = 412

 Score =  206 bits (525), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 60/400 (15%), Positives = 122/400 (30%), Gaps = 46/400 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   + + +             +  A K  +   +   +        + SL E
Sbjct: 16  GTPLWVYDADVIRDRIAQLRQFDV-----IRYAQKANSNVHILKLMRDEGACVDAVSLGE 70

Query: 63  VMLGHE-----KFGGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHK 116
           +              E   +     D    A +  +  T+   ++  L +  + A     
Sbjct: 71  IERSLAAGFSPGGEPEGVVFTADLIDRPTLAAVLEHGVTVNAGSLDMLARIGEHA--PGH 128

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170
           ++ LR+NP   +      +   P S+ G    D       +      + G+  H      
Sbjct: 129 RVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVRQYGLKLVGIHMHIGSGVD 188

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEF 221
            +   S +   +          I+ IS GGG+               Y  +    R +  
Sbjct: 189 -YGHLSQVCDAMVDLVTSLGHDIDAISAGGGLSIPYRDGEPRVDVGHYFSQWDAARKRIE 247

Query: 222 SE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279
               + V+I +EPG  +V    TL T V  ++   K+  + +D+     +   +     A
Sbjct: 248 RHLGHPVRIEIEPGRFLVAEAGTLVTEVQAVNRRPKHDFVLIDAGFNDLMRPSMYGSYHA 307

Query: 280 TIYP-NTGPYTAM-------VCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324
                + G   A        + G  C +GD+F +              +IGD +   D  
Sbjct: 308 VSVHAHDGALPAGRPLVDLAIAGPLCESGDVFTQDAGGVVTHRKLAQPQIGDLLFLHDAG 367

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            Y  +  + +N   +    + +        R  +  +   
Sbjct: 368 AYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIGELLA 407


>gi|124382045|ref|YP_001024476.1| Rieske family iron-sulfur cluster-binding protein
            /carboxynorspermidine decarboxylase [Burkholderia mallei
            NCTC 10229]
          Length = 1086

 Score =  206 bits (525), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%)

Query: 2    IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            + TP ++ D++ L + L +   +  ++G +LL  LK F+  G  + +  ++DG  +SS +
Sbjct: 706  LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 765

Query: 62   EVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E           G  H    A +D ++  ++ NCD +  N++SQ  +  D A       G
Sbjct: 766  EAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 824

Query: 120  LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173
            LRINP  S       DP RP S+LG                +  + G+ FH NC++  F 
Sbjct: 825  LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 884

Query: 174  CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
              +  ++++EK     +  + WI+LGGG       Y  +      K   E + V +++EP
Sbjct: 885  RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 943

Query: 234  GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291
            G AIV    T+  +V+D+ ++    + V  +   H P+   YQ    +  +     +  +
Sbjct: 944  GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 1003

Query: 292  VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
            + G SCLAGD+FG + F+ P+++G R++F +   Y + + + FNGIN+P++  +  DG +
Sbjct: 1004 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1063

Query: 352  KAIREFSYNDYYN 364
             A++ FSY D+  
Sbjct: 1064 AAVQRFSYEDFLR 1076


>gi|282850320|ref|ZP_06259699.1| putative diaminopimelate decarboxylase [Veillonella parvula ATCC
           17745]
 gi|282579813|gb|EFB85217.1| putative diaminopimelate decarboxylase [Veillonella parvula ATCC
           17745]
          Length = 418

 Score =  206 bits (525), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 64/393 (16%), Positives = 122/393 (31%), Gaps = 29/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+++ D++ ++ N+ + +     N G K   A+K      +   L +   G   SSL 
Sbjct: 21  PTPFHIYDEEGIIENMKSFINAFSWNKGFKQYFAVKATPNPYIMRLLQKLGVGADCSSLA 80

Query: 62  EVMLG-HEKFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E++L       G    +        E    L     I  + ++ +   +     L     
Sbjct: 81  ELLLCEKVGITGHDIMFTSNDTPYVEYKKALEMGAIINLDDITHIEYLEKNHGSLPDTFC 140

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVNGLMFHNNCENKSFLC- 174
           +R NP                ++ G   +   E+  +     V     H    +      
Sbjct: 141 VRYNPGSLKEGGNTIIGLPEEAKYGMTREQIFEAYKQLQAKGVKHFGIHTMVVSNELDID 200

Query: 175 -----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK----- 224
                                  IE+I LGGG+    K        + L +  E+     
Sbjct: 201 GLVGTAELCFNLAVDIKKELGITIEFIDLGGGVGVAYKPEQTPVDFRVLSKGVEEAYNRI 260

Query: 225 ------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                   V +  E G  +      L +T +   +  ++ + +D+ +   +   L     
Sbjct: 261 LVANGLNDVALAYECGRMVTGPFGYLVSTAIHKKDIYRHYIGLDACMANLMRPALYGSYH 320

Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        + IGDR+   D   +  +    +
Sbjct: 321 HITVMGKENAPKDHVYDVTGSLCENNDKFAIQRELPKIDIGDRVIIHDAGAHGHSMGFNY 380

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       + + DG++  IR   +Y+D +  L
Sbjct: 381 NGKLRSAELLLHKDGSVTQIRRAETYDDLFGTL 413


>gi|167743070|ref|ZP_02415844.1| bifunctional protein [Burkholderia pseudomallei 14]
          Length = 1095

 Score =  206 bits (525), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%)

Query: 2    IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            + TP ++ D++ L + L +   +  ++G +LL  LK F+  G  + +  ++DG  +SS +
Sbjct: 715  LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 774

Query: 62   EVMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E           G  H    A +D ++  ++ NCD +  N++SQ  +  D A       G
Sbjct: 775  EAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 833

Query: 120  LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173
            LRINP  S       DP RP S+LG                +  + G+ FH NC++  F 
Sbjct: 834  LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 893

Query: 174  CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
              +  ++++EK     +  + WI+LGGG       Y  +      K   E + V +++EP
Sbjct: 894  RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 952

Query: 234  GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291
            G AIV    T+  +V+D+ ++    + V  +   H P+   YQ    +  +     +  +
Sbjct: 953  GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 1012

Query: 292  VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
            + G SCLAGD+FG + F+ P+++G R++F +   Y + + + FNGIN+P++  +  DG +
Sbjct: 1013 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1072

Query: 352  KAIREFSYNDYYN 364
             A++ FSY D+  
Sbjct: 1073 AAVQRFSYEDFLR 1085


>gi|53722474|ref|YP_111459.1| bifunctional protein [Burkholderia pseudomallei K96243]
 gi|52212888|emb|CAH38924.1| putative bifunctional protein [Burkholderia pseudomallei K96243]
          Length = 1092

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%)

Query: 2    IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            + TP ++ D++ L + L +   +  ++G +LL  LK F+  G  + +  ++DG  +SS +
Sbjct: 712  LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 771

Query: 62   EVMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E           G  H    A +D ++  ++ NCD +  N++SQ  +  D A       G
Sbjct: 772  EAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 830

Query: 120  LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173
            LRINP  S       DP RP S+LG                +  + G+ FH NC++  F 
Sbjct: 831  LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 890

Query: 174  CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
              +  ++++EK     +  + WI+LGGG       Y  +      K   E + V +++EP
Sbjct: 891  RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 949

Query: 234  GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291
            G AIV    T+  +V+D+ ++    + V  +   H P+   YQ    +  +     +  +
Sbjct: 950  GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 1009

Query: 292  VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
            + G SCLAGD+FG + F+ P+++G R++F +   Y + + + FNGIN+P++  +  DG +
Sbjct: 1010 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1069

Query: 352  KAIREFSYNDYYN 364
             A++ FSY D+  
Sbjct: 1070 AAVQRFSYEDFLR 1082


>gi|332654112|ref|ZP_08419856.1| protein TabA [Ruminococcaceae bacterium D16]
 gi|332517198|gb|EGJ46803.1| protein TabA [Ruminococcaceae bacterium D16]
          Length = 419

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 70/396 (17%), Positives = 122/396 (30%), Gaps = 34/396 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +  N          N G     A+K      +   L +   G   SSL 
Sbjct: 19  PTPFHLYDEKGIRANARALRQAFAWNPGYTEYFAVKATPNPQILKILKEEGCGVDCSSLT 78

Query: 62  EVMLG-HEKFGGETHAYNVAYKDCEIDA-VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+M+     F G    ++      E  A       TI  + ++ ++  K+    + KKI 
Sbjct: 79  ELMMSDRCGFTGGQIMFSSNDTPAEEFALAAKLGATINLDDITHIDFLKETIGYIPKKIS 138

Query: 120 LRINPSV-----SYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCE 168
            R NP          +      N   ++ G            +++E     G+       
Sbjct: 139 CRFNPGGVFRLGESKEGFQVMDNPGDAKYGMTPAQITEAFKRLKAEGAEEFGIHAFLASN 198

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
             S   +      + +   K        I +I+L GG+    +     +    + E   K
Sbjct: 199 TLSNDYYPALARILFQLAVKLKEETGAHITFINLSGGVGVPYRPDQTANDIAVIGEGVRK 258

Query: 225 YSVQI-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL 273
              +I             E G  ++     L T VL      K  V VD+     +   +
Sbjct: 259 AYEEILVPAGMGDVALCTELGRFMLAPYGHLVTKVLHFKHTYKEYVGVDACAANLMRPAM 318

Query: 274 LYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
                             +   V G  C   D F        ++IGD +   D   +   
Sbjct: 319 YGAYHHITVMGKEDAPCDHKYDVTGALCENNDKFAVDRMLPEIEIGDLLVIHDTGAHGHA 378

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
               +NG       +   DG+ + IR   +  DY+ 
Sbjct: 379 MGYQYNGRLRSAEVLLQEDGSTRLIRRAETPEDYFA 414


>gi|254301549|ref|ZP_04968993.1| iron-sulfur cluster-binding protein, rieske family/putative
            carboxynorspermidine decarboxylase [Burkholderia
            pseudomallei 406e]
 gi|157811425|gb|EDO88595.1| iron-sulfur cluster-binding protein, rieske family/putative
            carboxynorspermidine decarboxylase [Burkholderia
            pseudomallei 406e]
          Length = 1101

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%)

Query: 2    IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            + TP ++ D++ L + L +   +  ++G +LL  LK F+  G  + +  ++DG  +SS +
Sbjct: 721  LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 780

Query: 62   EVMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E           G  H    A +D ++  ++ NCD +  N++SQ  +  D A       G
Sbjct: 781  EAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 839

Query: 120  LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173
            LRINP  S       DP RP S+LG                +  + G+ FH NC++  F 
Sbjct: 840  LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 899

Query: 174  CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
              +  ++++EK     +  + WI+LGGG       Y  +      K   E + V +++EP
Sbjct: 900  RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 958

Query: 234  GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291
            G AIV    T+  +V+D+ ++    + V  +   H P+   YQ    +  +     +  +
Sbjct: 959  GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 1018

Query: 292  VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
            + G SCLAGD+FG + F+ P+++G R++F +   Y + + + FNGIN+P++  +  DG +
Sbjct: 1019 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1078

Query: 352  KAIREFSYNDYYN 364
             A++ FSY D+  
Sbjct: 1079 AAVQRFSYEDFLR 1091


>gi|317407679|gb|EFV87615.1| diaminopimelate decarboxylase [Achromobacter xylosoxidans C54]
          Length = 409

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 58/399 (14%), Positives = 113/399 (28%), Gaps = 45/399 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   +   +             +  A K  +   +   +        + SL E
Sbjct: 16  GTPLWVYDAAVIRERIAQLRRFDA-----IRYAQKACSNLHILRLMRAEGVMVDAVSLGE 70

Query: 63  VMLGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
           +                  +     D    A +      +   ++  L +    A     
Sbjct: 71  IERSLAAGFEPAGEPAGVVFTADLIDHATLATVVKHGITVNAGSLDMLERVGQHA--PGH 128

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170
           ++ LRINP   +      +   P S+ G    D       +      + G+  H      
Sbjct: 129 RVWLRINPGFGHGHSNKTNTGGPQSKHGIWIDDVAAAIGIVRRYGLKLVGIHMHIGSGVN 188

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK-- 224
            +   S++   +          IE IS GGG+               +  +     ++  
Sbjct: 189 -YGHLSSVCDAMVDVVASLDHDIEAISAGGGLSIPYREGEPRIDCDHYFAQWDAARKRIE 247

Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279
               + V++ +EPG  +V     L   V  I+   +     VD+     +   +      
Sbjct: 248 QRLGHEVRLEIEPGRFLVAEAGALVAEVHAINRRPERDFALVDAGFNDLMRPAMYGSYHR 307

Query: 280 TIYP-------NTGPYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVAG 325
                       T      V G  C +GD+F +              +IGD + F +   
Sbjct: 308 ISVHAPDGATPPTAETRIAVAGPLCESGDVFTQDAGGVVSDQSLPRPRIGDFLVFHNAGA 367

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  + +N   +    + N   T    R  +  D   
Sbjct: 368 YGASMSSNYNTRPLAAEVLLNRSETRLIRRRQTVADLLA 406


>gi|225010651|ref|ZP_03701121.1| diaminopimelate decarboxylase [Flavobacteria bacterium MS024-3C]
 gi|225005204|gb|EEG43156.1| diaminopimelate decarboxylase [Flavobacteria bacterium MS024-3C]
          Length = 414

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 65/384 (16%), Positives = 115/384 (29%), Gaps = 27/384 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           P Y+ D +K+ +  +         + +KL  A K  +   +   +N    G  + S+ EV
Sbjct: 16  PVYVYDAEKIKSQYNRLTTAFSGVSKLKLNYAAKALSNISILRLMNSLGSGLDTVSIQEV 75

Query: 64  MLGH-EKFGGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            LG    F      +       E     +     I  + +S L +F  K       + +R
Sbjct: 76  QLGLKAGFKPSDIIFTPNGVSLEELETAAGLGVRINIDNLSLLEQFGSK--HPEIPVCIR 133

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFLCF 175
           INP V              S+ G                  N+NG+  H   +      F
Sbjct: 134 INPHVMAGGNANISVGHIDSKFGISIHQIPHILRITTLTKMNINGIHMHTGSDILDIEVF 193

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY----- 230
               + I  E       +++I  G G     K+  ++   + L +   K           
Sbjct: 194 LYASE-ILFETAKNFKNLDFIDFGSGFKVPYKEGDIETNIEELGDKLSKRFNDFCEQYGK 252

Query: 231 -----LEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQES--ATIY 282
                 EPG+ +V+   +    V  + +        +DS     +   L         I 
Sbjct: 253 PLTLAFEPGKFLVSEAGSFLAKVNVVKQTTSTVFASIDSGFNHLIRPMLYGSTHGINNIS 312

Query: 283 PNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
             +G      V G  C   D F        +  GD + F++   Y     + +N    P 
Sbjct: 313 NPSGRERFYSVVGYICET-DTFATNRKIAEITEGDILCFKNAGAYCFTMASNYNSRFRPA 371

Query: 342 IAVKNVDGTIKAIREFSYNDYYNN 365
             +  +          +  D   N
Sbjct: 372 EVLWYMGEAHLIRAAETMEDIMRN 395


>gi|53717527|ref|YP_105509.1| Rieske family iron-sulfur cluster-binding protein
            /carboxynorspermidine decarboxylase [Burkholderia mallei
            ATCC 23344]
 gi|238563454|ref|ZP_00438861.2| iron-sulfur cluster-binding protein, Rieske family/putative
            carboxynorspermidine decarboxylase [Burkholderia mallei
            GB8 horse 4]
 gi|52423497|gb|AAU47067.1| iron-sulfur cluster-binding protein, rieske
            family/carboxynorspermidine decarboxylase [Burkholderia
            mallei ATCC 23344]
 gi|238520680|gb|EEP84138.1| iron-sulfur cluster-binding protein, Rieske family/putative
            carboxynorspermidine decarboxylase [Burkholderia mallei
            GB8 horse 4]
          Length = 1055

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%)

Query: 2    IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            + TP ++ D++ L + L +   +  ++G +LL  LK F+  G  + +  ++DG  +SS +
Sbjct: 675  LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 734

Query: 62   EVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E           G  H    A +D ++  ++ NCD +  N++SQ  +  D A       G
Sbjct: 735  EAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 793

Query: 120  LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173
            LRINP  S       DP RP S+LG                +  + G+ FH NC++  F 
Sbjct: 794  LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 853

Query: 174  CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
              +  ++++EK     +  + WI+LGGG       Y  +      K   E + V +++EP
Sbjct: 854  RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 912

Query: 234  GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291
            G AIV    T+  +V+D+ ++    + V  +   H P+   YQ    +  +     +  +
Sbjct: 913  GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 972

Query: 292  VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
            + G SCLAGD+FG + F+ P+++G R++F +   Y + + + FNGIN+P++  +  DG +
Sbjct: 973  LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1032

Query: 352  KAIREFSYNDYYN 364
             A++ FSY D+  
Sbjct: 1033 AAVQRFSYEDFLR 1045


>gi|167923209|ref|ZP_02510300.1| iron-sulfur cluster-binding protein, rieske family/putative
            carboxynorspermidine decarboxylase [Burkholderia
            pseudomallei BCC215]
          Length = 1086

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%)

Query: 2    IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            + TP ++ D++ L + L +   +  ++G +LL  LK F+  G  + +  ++DG  +SS +
Sbjct: 706  LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 765

Query: 62   EVMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E           G  H    A +D ++  ++ NCD +  N++SQ  +  D A       G
Sbjct: 766  EAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 824

Query: 120  LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173
            LRINP  S       DP RP S+LG                +  + G+ FH NC++  F 
Sbjct: 825  LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 884

Query: 174  CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
              +  ++++EK     +  + WI+LGGG       Y  +      K   E + V +++EP
Sbjct: 885  RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 943

Query: 234  GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291
            G AIV    T+  +V+D+ ++    + V  +   H P+   YQ    +  +     +  +
Sbjct: 944  GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 1003

Query: 292  VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
            + G SCLAGD+FG + F+ P+++G R++F +   Y + + + FNGIN+P++  +  DG +
Sbjct: 1004 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1063

Query: 352  KAIREFSYNDYYN 364
             A++ FSY D+  
Sbjct: 1064 AAVQRFSYEDFLR 1076


>gi|262192870|ref|YP_001078798.2| Rieske family iron-sulfur cluster-binding protein
            /carboxynorspermidine decarboxylase [Burkholderia mallei
            NCTC 10247]
 gi|261826618|gb|ABM99334.2| rieske [2Fe-2S] domain/carboxynorspermidine decarboxylase
            [Burkholderia mallei NCTC 10229]
 gi|261834998|gb|ABO02524.2| rieske [2Fe-2S] domain/carboxynorspermidine decarboxylase
            [Burkholderia mallei NCTC 10247]
          Length = 1058

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%)

Query: 2    IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            + TP ++ D++ L + L +   +  ++G +LL  LK F+  G  + +  ++DG  +SS +
Sbjct: 678  LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 737

Query: 62   EVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E           G  H    A +D ++  ++ NCD +  N++SQ  +  D A       G
Sbjct: 738  EAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 796

Query: 120  LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173
            LRINP  S       DP RP S+LG                +  + G+ FH NC++  F 
Sbjct: 797  LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 856

Query: 174  CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
              +  ++++EK     +  + WI+LGGG       Y  +      K   E + V +++EP
Sbjct: 857  RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 915

Query: 234  GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291
            G AIV    T+  +V+D+ ++    + V  +   H P+   YQ    +  +     +  +
Sbjct: 916  GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 975

Query: 292  VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
            + G SCLAGD+FG + F+ P+++G R++F +   Y + + + FNGIN+P++  +  DG +
Sbjct: 976  LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1035

Query: 352  KAIREFSYNDYYN 364
             A++ FSY D+  
Sbjct: 1036 AAVQRFSYEDFLR 1048


>gi|251767426|ref|ZP_02267226.2| iron-sulfur cluster-binding protein, Rieske family/putative
            carboxynorspermidine decarboxylase [Burkholderia mallei
            PRL-20]
 gi|243062753|gb|EES44939.1| iron-sulfur cluster-binding protein, Rieske family/putative
            carboxynorspermidine decarboxylase [Burkholderia mallei
            PRL-20]
          Length = 1067

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%)

Query: 2    IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            + TP ++ D++ L + L +   +  ++G +LL  LK F+  G  + +  ++DG  +SS +
Sbjct: 687  LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 746

Query: 62   EVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E           G  H    A +D ++  ++ NCD +  N++SQ  +  D A       G
Sbjct: 747  EAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 805

Query: 120  LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173
            LRINP  S       DP RP S+LG                +  + G+ FH NC++  F 
Sbjct: 806  LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 865

Query: 174  CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
              +  ++++EK     +  + WI+LGGG       Y  +      K   E + V +++EP
Sbjct: 866  RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 924

Query: 234  GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291
            G AIV    T+  +V+D+ ++    + V  +   H P+   YQ    +  +     +  +
Sbjct: 925  GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 984

Query: 292  VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
            + G SCLAGD+FG + F+ P+++G R++F +   Y + + + FNGIN+P++  +  DG +
Sbjct: 985  LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1044

Query: 352  KAIREFSYNDYYN 364
             A++ FSY D+  
Sbjct: 1045 AAVQRFSYEDFLR 1057


>gi|134045435|ref|YP_001096921.1| diaminopimelate decarboxylase [Methanococcus maripaludis C5]
 gi|132663060|gb|ABO34706.1| diaminopimelate decarboxylase [Methanococcus maripaludis C5]
          Length = 436

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 61/398 (15%), Positives = 134/398 (33%), Gaps = 35/398 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK------LLLALKCFAAWGMFDTLNQYMDGTT 56
            TP Y++ + + + N    +   K    K      +  A K      +   L++   G  
Sbjct: 31  GTPLYVMSETQTVKNFTRYVESFKEYSEKTGKEFIISFAYKANTNLAVTKLLSKLGCGAD 90

Query: 57  SSSLYEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQK 113
             S  E+ +        E   +N   K  +   +    +      +++S+L    + A++
Sbjct: 91  IVSAGELYIAKLSDVPSEKIVFNGNCKLKDEIKMGIEAEIRAFNVDSISELILINETAKE 150

Query: 114 LHK--KIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLM 162
           + K   +  R+NP+V              ++ G         E  K   + +   + G+ 
Sbjct: 151 MGKVANVAFRVNPNVDAKTHPKISTGMKKNKFGLDIESGIALETIKMAEKMDNVKIVGIH 210

Query: 163 FHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ--- 216
            H   +      F+  +  + +      +   +I+ ++LGGG+             +   
Sbjct: 211 CHIGSQLTYISPFVEEARKIMDFVVLLKNEGIEIKDVNLGGGLGIPYDKNTKIPVQEDLS 270

Query: 217 ------RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK-NLVIVDSSVEAHV 269
                   +   +     + LEPG ++V     L  TV  + +      +++D+ +   +
Sbjct: 271 KAILDVIYEYEGKIELPNLILEPGRSLVATAGVLLGTVEHVKDTPVAKWIMIDAGMNDMM 330

Query: 270 PDYLL--YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
              +   Y E              + G  C + D+FG+      ++I D ++  DV  Y 
Sbjct: 331 RPAIYESYHEIVPCTVRDEKEVVSIAGGLCESSDVFGKDRELSKMEIKDTVAILDVGAYG 390

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           I+  N +N    P + + N           +  D  + 
Sbjct: 391 ISMANNYNSRGKPAMILTNEKEVSLIRARETLADLISK 428


>gi|330878524|gb|EGH12673.1| diaminopimelate decarboxylase [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 412

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 57/399 (14%), Positives = 113/399 (28%), Gaps = 45/399 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D Q +   +             +  A K  +   +   L        + SL E
Sbjct: 17  GTPLWVYDGQLIKKRVQQLA-AFD----TVRFAQKACSNLHILRLLRDAGAAVDAVSLGE 71

Query: 63  VMLGH-EKFGGE-------THAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114
           +       F  +              +    +  V+     +   ++  L++    A   
Sbjct: 72  LERALHAGFSAQTAQGTAGVVFTADVFDRATLQRVVEAQVEVNVGSIDMLHQLG--ALSP 129

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCE 168
             ++ LRINP   +      +     S+ G            +     ++ GL  H    
Sbjct: 130 GHRVWLRINPGFGHGHSRKTNTGGENSKHGIWHTHLQDALKLVRHYRLHLVGLHMHIGSG 189

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----------KDYPVKDFCQRL 218
              +     +   + +        IE IS GGG+                +   D  ++ 
Sbjct: 190 VD-YQHLQQVCSTMAELVVEMDHDIEAISAGGGLSVPYRAGELPINTSHYFAQWDHARKR 248

Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQE 277
            E    + +++ +EPG  +V     L + V             VD+     +   L    
Sbjct: 249 IEAHLGHPIRLEIEPGRFLVAQAGVLVSEVRATKHMGGKHFTLVDAGFNDLMRPSLYGSY 308

Query: 278 SATIYPNTGPYT-----AMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAG 325
                  +          +V G  C +GD+F        E       ++GD + F D   
Sbjct: 309 HEMSLITSRDEPLPMQETVVAGPLCESGDVFTQAEGGIVESRLLPVAQVGDYLVFHDAGA 368

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  + +N        + +        R    +D   
Sbjct: 369 YGASMSSNYNSRTHAAEVLVDDGQERLIRRRQPLDDLLR 407


>gi|271963175|ref|YP_003337371.1| diaminopimelate decarboxylase [Streptosporangium roseum DSM 43021]
 gi|270506350|gb|ACZ84628.1| diaminopimelate decarboxylase [Streptosporangium roseum DSM 43021]
          Length = 460

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 57/398 (14%), Positives = 122/398 (30%), Gaps = 38/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y++D++   +            G ++  A K F    +   + Q   G    S  E
Sbjct: 62  GSPLYVVDEEDFRSRCRDYREAF--TGGEVHYAGKAFLCREVARWIMQEDLGLDVCSAGE 119

Query: 63  VMLGHE-KFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F  E    +   K       AV +    I+ ++  ++ +    A K     +
Sbjct: 120 LAVALSVGFPPERITLHGNNKSLAELEKAVEAGVGHIVADSFEEIARLGFLADKHGRRPQ 179

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G         E  +  +      + GL  H   +
Sbjct: 180 VMIRVTVGVEAHTHEFIATAHDDQKFGFSLSSGAAAEAARRILALPQLELVGLHSHIGSQ 239

Query: 169 NKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F    + +              +  + LGGG      +       + + +    
Sbjct: 240 ITDTAGFEVAARRLATLLVQIKEEHGVVLPELDLGGGYGIPYVEGDTALDVKEIADGLRG 299

Query: 225 YSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271
               +            +EPG AI          V  I +    +  V +D  +  ++  
Sbjct: 300 IVANVARSAGLPVPKLTVEPGRAIAGLAGVTLYEVGTIKDVEGLRTYVSIDGGMSDNIRT 359

Query: 272 YLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGY 326
            L   E     A+   ++GP  + + G+ C +GD+     +    +  GD ++      Y
Sbjct: 360 ALYGAEYTARLASRESSSGPMLSRLVGKHCESGDMVVRDLWLPEDLATGDLVAVAGTGAY 419

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  N +N +  P +       +   +R  + +D   
Sbjct: 420 CRSLANNYNYLPKPAVVAVKDGVSRVIVRRETEDDLLR 457


>gi|303327333|ref|ZP_07357774.1| diaminopimelate decarboxylase [Desulfovibrio sp. 3_1_syn3]
 gi|302862273|gb|EFL85206.1| diaminopimelate decarboxylase [Desulfovibrio sp. 3_1_syn3]
          Length = 426

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 62/395 (15%), Positives = 114/395 (28%), Gaps = 35/395 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ ++  L         +    G  +  ++K  A   +   + +      + S  E
Sbjct: 28  GTPLYVYNENVLRQRCRDLTALSGQPGFGVNYSIKANANPVLLRMIREEGLVVDAMSPGE 87

Query: 63  VMLG-HEKFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           + +     F      Y +    D E+   L +   +  +++SQL+           K+ +
Sbjct: 88  LFMNDLAGFTPAEILYISNNNSDTELQNALVHGLLVSVDSLSQLDTLGRL--NRGGKVMV 145

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKSFLC 174
           R NP +              ++ G            +      + G+  H          
Sbjct: 146 RFNPGIGAGHHAKVVTAGKETKFGVTPDKMDEVFALLARHELTLAGINQHIGSLFMEPDG 205

Query: 175 F----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFS-- 222
           +      +L   E      + ++E I  GGG       Y       + D  +RL      
Sbjct: 206 YLNAARVLLDLAETLPDGALDRLEIIDFGGGFGIPYHKYEGEARLDMADLGRRLHAMISG 265

Query: 223 ----EKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQE 277
                 Y  +  +EPG  +      L   V  +  N  K  V  D      V   +    
Sbjct: 266 WAASAGYKGRFLVEPGRYVAAECGVLLGRVHAVKNNGDKRYVGTDLGFNVLVRPAMYDSF 325

Query: 278 S-------ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                        +  P    + G  C +GDI  +      ++ GD +   D   Y    
Sbjct: 326 HDVEIYRGEKGAADAEPMRQTIVGNICESGDILAKDRLLPVMREGDVLGILDAGAYGFTM 385

Query: 331 KNWFNGINMPTIAVKNVDG-TIKAIREFSYNDYYN 364
            + +N    P   +   DG      R  +  D   
Sbjct: 386 ASNYNQRRRPAEVLIQSDGTARLIRRRETLEDLAR 420


>gi|238019149|ref|ZP_04599575.1| hypothetical protein VEIDISOL_01012 [Veillonella dispar ATCC 17748]
 gi|237863848|gb|EEP65138.1| hypothetical protein VEIDISOL_01012 [Veillonella dispar ATCC 17748]
          Length = 418

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 66/393 (16%), Positives = 122/393 (31%), Gaps = 29/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+++ D++ ++ N+ + +     N G K   A+K      +   L +   G   SSL 
Sbjct: 21  PTPFHIYDEEGIIENMKSFIDAFSWNKGFKQYFAVKATPNPYIMRVLQKLGVGADCSSLA 80

Query: 62  EVMLG-HEKFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+ML       G    +        E    L     I  + ++ +   +     L     
Sbjct: 81  ELMLCEKVGITGHDIMFTSNDTPYVEYKKALEMGAIINLDDITHIEYLEKNHGSLPDTFC 140

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVNGLMFHNNCENKSFLC- 174
           +R NP                ++ G   +   E+  +     V     H    +      
Sbjct: 141 VRYNPGSLKEGGNTIIGLPEEAKYGMTREQIFEAYKQLQAKGVKHFGIHTMVVSNELDID 200

Query: 175 -----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
                                  +E+I LGGG+    K        + L +  E+   +I
Sbjct: 201 GLVGTAELCFNLAVDIKNELGINVEFIDLGGGVGVAYKPEQTPVDFKALSKGVEEAYNRI 260

Query: 230 Y-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                        E G  +      L +T +   +  ++ + +DS +   +   L     
Sbjct: 261 LVANGLGDVALAYECGRMVTGPFGYLVSTAIHKKDIYRHYIGLDSCMANLMRPALYGSYH 320

Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        + IGDRI   D   +  +    +
Sbjct: 321 HITVMGKENAPKDHVYDVTGSLCENNDKFAIQRELPKIDIGDRIIIHDAGAHGHSMGFNY 380

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       + + DG++  IR   +Y+D +  L
Sbjct: 381 NGKLRSAELLLHKDGSVTQIRRAETYDDLFGTL 413


>gi|126458140|ref|YP_001076002.1| Rieske family iron-sulfur cluster-binding protein
            /carboxynorspermidine decarboxylase [Burkholderia
            pseudomallei 1106a]
 gi|242312184|ref|ZP_04811201.1| iron-sulfur cluster-binding protein, rieske family/putative
            carboxynorspermidine decarboxylase [Burkholderia
            pseudomallei 1106b]
 gi|126231908|gb|ABN95321.1| iron-sulfur cluster-binding protein, rieske family/putative
            carboxynorspermidine decarboxylase [Burkholderia
            pseudomallei 1106a]
 gi|242135423|gb|EES21826.1| iron-sulfur cluster-binding protein, rieske family/putative
            carboxynorspermidine decarboxylase [Burkholderia
            pseudomallei 1106b]
          Length = 1134

 Score =  206 bits (524), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%)

Query: 2    IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            + TP ++ D++ L + L +   +  ++G +LL  LK F+  G  + +  ++DG  +SS +
Sbjct: 754  LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 813

Query: 62   EVMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E           G  H    A +D ++  ++ NCD +  N++SQ  +  D A       G
Sbjct: 814  EAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 872

Query: 120  LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173
            LRINP  S       DP RP S+LG                +  + G+ FH NC++  F 
Sbjct: 873  LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 932

Query: 174  CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
              +  ++++EK     +  + WI+LGGG       Y  +      K   E + V +++EP
Sbjct: 933  RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 991

Query: 234  GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291
            G AIV    T+  +V+D+ ++    + V  +   H P+   YQ    +  +     +  +
Sbjct: 992  GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 1051

Query: 292  VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
            + G SCLAGD+FG + F+ P+++G R++F +   Y + + + FNGIN+P++  +  DG +
Sbjct: 1052 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1111

Query: 352  KAIREFSYNDYYN 364
             A++ FSY D+  
Sbjct: 1112 AAVQRFSYEDFLR 1124


>gi|254186770|ref|ZP_04893286.1| iron-sulfur cluster-binding protein, rieske family/putative
            carboxynorspermidine decarboxylase [Burkholderia
            pseudomallei Pasteur 52237]
 gi|157934454|gb|EDO90124.1| iron-sulfur cluster-binding protein, rieske family/putative
            carboxynorspermidine decarboxylase [Burkholderia
            pseudomallei Pasteur 52237]
          Length = 1116

 Score =  206 bits (524), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%)

Query: 2    IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            + TP ++ D++ L + L +   +  ++G +LL  LK F+  G  + +  ++DG  +SS +
Sbjct: 736  LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 795

Query: 62   EVMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E           G  H    A +D ++  ++ NCD +  N++SQ  +  D A       G
Sbjct: 796  EAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 854

Query: 120  LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173
            LRINP  S       DP RP S+LG                +  + G+ FH NC++  F 
Sbjct: 855  LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 914

Query: 174  CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
              +  ++++EK     +  + WI+LGGG       Y  +      K   E + V +++EP
Sbjct: 915  RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 973

Query: 234  GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291
            G AIV    T+  +V+D+ ++    + V  +   H P+   YQ    +  +     +  +
Sbjct: 974  GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 1033

Query: 292  VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
            + G SCLAGD+FG + F+ P+++G R++F +   Y + + + FNGIN+P++  +  DG +
Sbjct: 1034 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1093

Query: 352  KAIREFSYNDYYN 364
             A++ FSY D+  
Sbjct: 1094 AAVQRFSYEDFLR 1106


>gi|296115244|ref|ZP_06833885.1| diaminopimelate decarboxylase [Gluconacetobacter hansenii ATCC
           23769]
 gi|295978345|gb|EFG85082.1| diaminopimelate decarboxylase [Gluconacetobacter hansenii ATCC
           23769]
          Length = 452

 Score =  206 bits (524), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 55/387 (14%), Positives = 111/387 (28%), Gaps = 28/387 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           + TP +++  Q L           ++AG  V +  A+K      +   L+    G    S
Sbjct: 47  LGTPTWVMGAQTLRTRYHRLDRAMRDAGLDVDIHFAVKANDHLAILKILHAQGAGADVVS 106

Query: 60  LYEVMLG-HEKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKF--KDKAQKL 114
             E+              ++   K       A+      I   +  +L+       A   
Sbjct: 107 GGELRRAIAAGIPAREIVFSGVGKTRAEMELALHHGIARINVESAEELDLLSAVAVACGR 166

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNC 167
              + LRINP V              ++ G      +E           +  G+  H   
Sbjct: 167 TAPVALRINPDVDAGTHAKITTGLAGNKFGIPYDRAVELYAHAASLPGIHAAGVAVHIGS 226

Query: 168 ENKSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEF 221
           + +    + A    +    +        ++ I  GGG+  + +       +     ++  
Sbjct: 227 QIERMQPYRAAYARVADLVRAIRARGLGVDVIDCGGGLGISYRHETEGAPEALAHAIRIE 286

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV---DSSVEAHVPDYLLYQES 278
                 ++ +EPG  +      L +TV+        +      D+++       L     
Sbjct: 287 LGDLGTRLEIEPGRWLAGPAGVLLSTVVLRKRGYDGMPPFIVLDAAMNDLARPSLYDAWH 346

Query: 279 ATIYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
             I  +            V G  C +GD FG       +  G R++  D   Y +   + 
Sbjct: 347 GIIPLSARDAVAPSEQVHVVGPVCESGDTFGHDRTLPRLHDGARVALLDTGAYGMVMSST 406

Query: 334 FNGINMPTIAVKNVDGTIKAIREFSYN 360
           +N   M    + +              
Sbjct: 407 YNARAMAAQVLVDGSRWDVIRARQKVE 433


>gi|291286718|ref|YP_003503534.1| Orn/DAP/Arg decarboxylase 2 [Denitrovibrio acetiphilus DSM 12809]
 gi|290883878|gb|ADD67578.1| Orn/DAP/Arg decarboxylase 2 [Denitrovibrio acetiphilus DSM 12809]
          Length = 412

 Score =  206 bits (524), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 60/392 (15%), Positives = 118/392 (30%), Gaps = 30/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+++ D++ ++ N        +     K   A+K      +   L     G   SS+ 
Sbjct: 21  PTPFHIYDEKAIVENAKRFKKAFEWAPNFKNYFAVKALPNPAIVKLLKNEGFGADCSSMA 80

Query: 62  EVMLG-HEKFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++       G+   +      + E    +     I  + ++ ++  +  A        
Sbjct: 81  ELLICDMVGITGDDIMFTSNETPEEEYQKAMEQKAVINLDDITHIDFLEKCAGLPETIC- 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFHNNCENK----- 170
                                ++ G      IE+      K V     H    +      
Sbjct: 140 -FRYNPGPLKGGNDIIGKPEDAKYGLTKTQMIEAYKIMKSKGVKKFGMHTMVASNELNVD 198

Query: 171 -SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE------ 223
                   + +   +        +++I+LGGGI    K    +   + L    +      
Sbjct: 199 YFVETAVILFEMAAEIATEVGINLDFINLGGGIGIPYKPEQDEVNLEELGSKIKAKYDEI 258

Query: 224 ----KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA 279
                +  +IY E G  I      L T  +      K  + VD+S+   +   +      
Sbjct: 259 LSSKGFQPEIYFECGRMITGPYGYLVTKAIHTKSIYKEYIGVDASMANLMRPGMYGSYHH 318

Query: 280 TIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                       +T  V G  C   D F        ++I D ++  D   +  +    +N
Sbjct: 319 VTVLGKENAEPVFTYDVVGSLCENCDKFAVDRKLPKIEIDDVLAIHDTGAHGHSMGFNYN 378

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           G       +   DGT + IR   +Y D +  L
Sbjct: 379 GKLRSAELLLKADGTAEMIRRAETYEDLFATL 410


>gi|206563916|ref|YP_002234679.1| diaminopimelate decarboxylase [Burkholderia cenocepacia J2315]
 gi|198039956|emb|CAR55934.1| putative diaminopimelate decarboxylase [Burkholderia cenocepacia
           J2315]
          Length = 412

 Score =  206 bits (524), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 60/400 (15%), Positives = 123/400 (30%), Gaps = 46/400 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   + + +             +  A K  +   +   + +      + SL E
Sbjct: 16  GTPLWVYDADVIRDRIAQLRQFDV-----IRYAQKANSNVHILKLMREEGACVDAVSLGE 70

Query: 63  VMLGHEKF-----GGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHK 116
           +              E   +     D    A +  +  T+   ++  L +  + A     
Sbjct: 71  IERSLAAGFSPAGEPEGVVFTADLIDRPTLAAVLKHGVTVNAGSLDMLARIGEHA--PGH 128

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170
           ++ LR+NP   +      +   P S+ G    D       +      + G+  H      
Sbjct: 129 RVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVRQYGLKLVGIHMHIGSGVD 188

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEF 221
            +   S +   +          I+ IS GGG+               Y  +    R +  
Sbjct: 189 -YGHLSQVCDAMVDLVTSLGHDIDAISAGGGLSIPYRDGEPRVDVGHYFSQWDAARKRIE 247

Query: 222 SE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279
               + V+I +EPG  +V    TL T V  ++   K+  + +D+     +   +     A
Sbjct: 248 RHLGHPVRIEIEPGRFLVAEAGTLVTEVQAVNRRPKHDFVLIDAGFNDLMRPSMYGSYHA 307

Query: 280 TIYP-NTGPYTAM-------VCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324
                + G   A        + G  C +GD+F +              +IGD +   D  
Sbjct: 308 VSVHAHDGALPAGRPLVDLAIAGPLCESGDVFTQDAGGVVTHRKLAQPQIGDLLFLHDAG 367

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            Y  +  + +N   +    + +        R  +  +   
Sbjct: 368 AYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIGELLA 407


>gi|254204234|ref|ZP_04910593.1| iron-sulfur cluster-binding protein, rieske family/putative
            carboxynorspermidine decarboxylase [Burkholderia mallei
            FMH]
 gi|147745118|gb|EDK52199.1| iron-sulfur cluster-binding protein, rieske family/putative
            carboxynorspermidine decarboxylase [Burkholderia mallei
            FMH]
          Length = 1107

 Score =  206 bits (524), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%)

Query: 2    IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            + TP ++ D++ L + L +   +  ++G +LL  LK F+  G  + +  ++DG  +SS +
Sbjct: 727  LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 786

Query: 62   EVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E           G  H    A +D ++  ++ NCD +  N++SQ  +  D A       G
Sbjct: 787  EAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 845

Query: 120  LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173
            LRINP  S       DP RP S+LG                +  + G+ FH NC++  F 
Sbjct: 846  LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 905

Query: 174  CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
              +  ++++EK     +  + WI+LGGG       Y  +      K   E + V +++EP
Sbjct: 906  RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 964

Query: 234  GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291
            G AIV    T+  +V+D+ ++    + V  +   H P+   YQ    +  +     +  +
Sbjct: 965  GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 1024

Query: 292  VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
            + G SCLAGD+FG + F+ P+++G R++F +   Y + + + FNGIN+P++  +  DG +
Sbjct: 1025 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1084

Query: 352  KAIREFSYNDYYN 364
             A++ FSY D+  
Sbjct: 1085 AAVQRFSYEDFLR 1097


>gi|226196072|ref|ZP_03791658.1| iron-sulfur cluster-binding protein, rieske family/putative
            carboxynorspermidine decarboxylase [Burkholderia
            pseudomallei Pakistan 9]
 gi|254193632|ref|ZP_04900064.1| iron-sulfur cluster-binding protein, rieske family/putative
            carboxynorspermidine decarboxylase [Burkholderia
            pseudomallei S13]
 gi|169650383|gb|EDS83076.1| iron-sulfur cluster-binding protein, rieske family/putative
            carboxynorspermidine decarboxylase [Burkholderia
            pseudomallei S13]
 gi|225931965|gb|EEH27966.1| iron-sulfur cluster-binding protein, rieske family/putative
            carboxynorspermidine decarboxylase [Burkholderia
            pseudomallei Pakistan 9]
          Length = 1122

 Score =  206 bits (524), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%)

Query: 2    IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            + TP ++ D++ L + L +   +  ++G +LL  LK F+  G  + +  ++DG  +SS +
Sbjct: 742  LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 801

Query: 62   EVMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E           G  H    A +D ++  ++ NCD +  N++SQ  +  D A       G
Sbjct: 802  EAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 860

Query: 120  LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173
            LRINP  S       DP RP S+LG                +  + G+ FH NC++  F 
Sbjct: 861  LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 920

Query: 174  CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
              +  ++++EK     +  + WI+LGGG       Y  +      K   E + V +++EP
Sbjct: 921  RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 979

Query: 234  GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291
            G AIV    T+  +V+D+ ++    + V  +   H P+   YQ    +  +     +  +
Sbjct: 980  GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 1039

Query: 292  VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
            + G SCLAGD+FG + F+ P+++G R++F +   Y + + + FNGIN+P++  +  DG +
Sbjct: 1040 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1099

Query: 352  KAIREFSYNDYYN 364
             A++ FSY D+  
Sbjct: 1100 AAVQRFSYEDFLR 1112


>gi|254355511|ref|ZP_04971791.1| iron-sulfur cluster-binding protein, rieske family/putative
            carboxynorspermidine decarboxylase [Burkholderia mallei
            2002721280]
 gi|148023604|gb|EDK82666.1| iron-sulfur cluster-binding protein, rieske family/putative
            carboxynorspermidine decarboxylase [Burkholderia mallei
            2002721280]
          Length = 1110

 Score =  206 bits (524), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%)

Query: 2    IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            + TP ++ D++ L + L +   +  ++G +LL  LK F+  G  + +  ++DG  +SS +
Sbjct: 730  LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 789

Query: 62   EVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E           G  H    A +D ++  ++ NCD +  N++SQ  +  D A       G
Sbjct: 790  EAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 848

Query: 120  LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173
            LRINP  S       DP RP S+LG                +  + G+ FH NC++  F 
Sbjct: 849  LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 908

Query: 174  CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
              +  ++++EK     +  + WI+LGGG       Y  +      K   E + V +++EP
Sbjct: 909  RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 967

Query: 234  GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291
            G AIV    T+  +V+D+ ++    + V  +   H P+   YQ    +  +     +  +
Sbjct: 968  GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 1027

Query: 292  VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
            + G SCLAGD+FG + F+ P+++G R++F +   Y + + + FNGIN+P++  +  DG +
Sbjct: 1028 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1087

Query: 352  KAIREFSYNDYYN 364
             A++ FSY D+  
Sbjct: 1088 AAVQRFSYEDFLR 1100


>gi|121597394|ref|YP_990159.1| Rieske family iron-sulfur cluster-binding protein
            /carboxynorspermidine decarboxylase [Burkholderia mallei
            SAVP1]
 gi|254174356|ref|ZP_04881018.1| iron-sulfur cluster-binding protein, rieske
            family/carboxynorspermidine decarboxylase [Burkholderia
            mallei ATCC 10399]
 gi|121225192|gb|ABM48723.1| iron-sulfur cluster-binding protein, rieske
            family/carboxynorspermidine decarboxylase [Burkholderia
            mallei SAVP1]
 gi|160695402|gb|EDP85372.1| iron-sulfur cluster-binding protein, rieske
            family/carboxynorspermidine decarboxylase [Burkholderia
            mallei ATCC 10399]
          Length = 1113

 Score =  206 bits (524), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%)

Query: 2    IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            + TP ++ D++ L + L +   +  ++G +LL  LK F+  G  + +  ++DG  +SS +
Sbjct: 733  LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 792

Query: 62   EVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E           G  H    A +D ++  ++ NCD +  N++SQ  +  D A       G
Sbjct: 793  EAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 851

Query: 120  LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173
            LRINP  S       DP RP S+LG                +  + G+ FH NC++  F 
Sbjct: 852  LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 911

Query: 174  CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
              +  ++++EK     +  + WI+LGGG       Y  +      K   E + V +++EP
Sbjct: 912  RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 970

Query: 234  GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291
            G AIV    T+  +V+D+ ++    + V  +   H P+   YQ    +  +     +  +
Sbjct: 971  GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 1030

Query: 292  VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
            + G SCLAGD+FG + F+ P+++G R++F +   Y + + + FNGIN+P++  +  DG +
Sbjct: 1031 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1090

Query: 352  KAIREFSYNDYYN 364
             A++ FSY D+  
Sbjct: 1091 AAVQRFSYEDFLR 1103


>gi|216391|dbj|BAA14211.1| diaminopimelate decarboxylase [Bacillus subtilis subsp.
           amylosacchariticus]
          Length = 440

 Score =  206 bits (524), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 66/402 (16%), Positives = 122/402 (30%), Gaps = 44/402 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   +     +      +AG   ++  A K F++  M     +        S 
Sbjct: 32  GTPLYVYDVALIRERAKSFKQAFISAGLKAQVAYASKAFSSVAMIQLAEEEGLSLDVVS- 90

Query: 61  YE--VMLGHEKFGGETHAYNV------AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112
            E  + L  + F      +                A  +    I   +    +    K  
Sbjct: 91  GESYIRLLQQAFRQNASTFMETIRAGKNCGWRLSTASAALWWIISMKSSLLEDL--CKET 148

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMF 163
                + LRI P V           +  S+ G            +  ++SE   + G+  
Sbjct: 149 GHSIDVLLRITPRVEAHTHDYITTGQEDSKFGFDLHNGQTERAIEQVLQSEHIQLLGVHC 208

Query: 164 HNNCENKSFLCFSAMLKNIEKEFGHFITQI----EWISLGGGIHFTDKDYPVKDFC---- 215
           H   +      F    + I K+   +        + ++LGGG      +           
Sbjct: 209 HIGSQIFDTAGFVLAAEKIFKKLDEWRDSYSFVSKVLNLGGGFGIRYTEDDEPLHATEYV 268

Query: 216 ----QRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VE 266
               + +KE + +Y   I   ++EPG ++V +  T   TV    E       V     + 
Sbjct: 269 EKIIEAVKENASRYGFDIPEIWIEPGRSLVGDAGTTLYTVGSQKEVPGVRQYVAVDGGMN 328

Query: 267 AHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFED 322
            ++   L   +     A         T  + G+ C +GD+         VK GD ++   
Sbjct: 329 DNIRPALYQAKYEAAAANRIGEAHDKTVSIAGKCCESGDMLIWDIDLPEVKEGDLLAVLY 388

Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              Y  +  N +N I  P +           ++  +Y D   
Sbjct: 389 -RAYGYSMANNYNRIPRPAVVFVENGEAHLVVKRETYEDIVK 429


>gi|121591442|ref|ZP_01678719.1| carboxynorspermidine decarboxylase [Vibrio cholerae 2740-80]
 gi|121546706|gb|EAX56884.1| carboxynorspermidine decarboxylase [Vibrio cholerae 2740-80]
          Length = 344

 Score =  206 bits (524), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 156/340 (45%), Positives = 229/340 (67%), Gaps = 3/340 (0%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TPY++ID+ KL+ NL+ A ++++ +GVK++LALKCF+ WG+FD +  Y+DGTTSS  +
Sbjct: 6   LRTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSGPF 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG+E FGGETHAY+V Y + ++  V+  CD +IFN+ SQL  ++   +     +GLR
Sbjct: 66  EVKLGYETFGGETHAYSVGYSEEDVKEVIDICDKMIFNSQSQLAAYRHLVEGKA-SLGLR 124

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           INP VSY+   LA+P R FSRLG +     ES   ++NG+MFH NCENK    F  +L  
Sbjct: 125 INPGVSYAGQDLANPARQFSRLGVQADHIDESVFDSINGVMFHMNCENKDVDAFIGLLDA 184

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I + FG ++ +++W+SLGGG+ FT   Y V+     LK F+E+++VQ+YLEPGEAI+T T
Sbjct: 185 ISERFGRYLDKLDWVSLGGGVFFTWPGYDVEKLGAALKAFAERHAVQLYLEPGEAIITKT 244

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLA 299
           T L  TV+DI EN     IVDS+ EAH  D L+Y+E A++    + G +  ++   SCLA
Sbjct: 245 TDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASDKGQHEYVIGSCSCLA 304

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
           GD F    F++P+++G ++   D AGY + + NWFNG+ M
Sbjct: 305 GDQFCVAKFDEPLQVGQKLHILDSAGYTMVKLNWFNGLKM 344


>gi|217425313|ref|ZP_03456807.1| iron-sulfur cluster-binding protein, rieske family/putative
            carboxynorspermidine decarboxylase [Burkholderia
            pseudomallei 576]
 gi|217391564|gb|EEC31592.1| iron-sulfur cluster-binding protein, rieske family/putative
            carboxynorspermidine decarboxylase [Burkholderia
            pseudomallei 576]
          Length = 1110

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%)

Query: 2    IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            + TP ++ D++ L + L +   +  ++G +LL  LK F+  G  + +  ++DG  +SS +
Sbjct: 730  LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 789

Query: 62   EVMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E           G  H    A +D ++  ++ NCD +  N++SQ  +  D A       G
Sbjct: 790  EAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 848

Query: 120  LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173
            LRINP  S       DP RP S+LG                +  + G+ FH NC++  F 
Sbjct: 849  LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 908

Query: 174  CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
              +  ++++EK     +  + WI+LGGG       Y  +      K   E + V +++EP
Sbjct: 909  RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 967

Query: 234  GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291
            G AIV    T+  +V+D+ ++    + V  +   H P+   YQ    +  +     +  +
Sbjct: 968  GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 1027

Query: 292  VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
            + G SCLAGD+FG + F+ P+++G R++F +   Y + + + FNGIN+P++  +  DG +
Sbjct: 1028 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1087

Query: 352  KAIREFSYNDYYN 364
             A++ FSY D+  
Sbjct: 1088 AAVQRFSYEDFLR 1100


>gi|311107337|ref|YP_003980190.1| diaminopimelate decarboxylase [Achromobacter xylosoxidans A8]
 gi|310762026|gb|ADP17475.1| diaminopimelate decarboxylase 1 [Achromobacter xylosoxidans A8]
          Length = 411

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 56/400 (14%), Positives = 114/400 (28%), Gaps = 46/400 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   +   +             +  A K  +   +   +        + SL E
Sbjct: 16  GTPLWVYDAAVIRERIAQLRRFD-----TIRYAQKACSNLHILRLMRAEGAVVDAVSLGE 70

Query: 63  VMLGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
           +              E   +     D    A +      +   ++  L +    +     
Sbjct: 71  IERSLAAGFQPQGEPEGIVFTADLIDHATLAAVLKHGITVNAGSLDMLARVGQAS--PGH 128

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170
           ++ LRINP   +      +   P S+ G    D       +      + G+  H      
Sbjct: 129 RVWLRINPGFGHGHSNKTNTGGPQSKHGIWIGDVAEAMAIVRRHGLKLVGIHMHIGSGVD 188

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE------- 223
            +   S++   +          IE IS GGG+    ++   +  C    E          
Sbjct: 189 -YAHLSSVCDAMVDVVASLDHDIEAISAGGGLSIPYREGDARIDCDHYFEQWNAARQRIA 247

Query: 224 ---KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279
               + +++ +EPG  +V     L + V  I+   +     VD+     +   +      
Sbjct: 248 ERLGHEIRLEIEPGRFLVAEAGALVSEVHSINRRPERDFALVDAGFNDLMRPAMYGSYHR 307

Query: 280 TIYPNT--------GPYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324
                               V G  C +GD+F +              +IGD + F D  
Sbjct: 308 ISVHAPDGSQPQGAAETRIAVAGPLCESGDVFTQDAGGVVSDQLLPQPRIGDFLVFHDAG 367

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            Y  +  + +N   +    + +        R  +  +   
Sbjct: 368 AYGSSMSSNYNSRPLAPEVLLDNGAARLIRRRQTIGELLA 407


>gi|170076731|ref|YP_001733369.1| diaminopimelate decarboxylase [Synechococcus sp. PCC 7002]
 gi|169884400|gb|ACA98113.1| diaminopimelate decarboxylase [Synechococcus sp. PCC 7002]
          Length = 462

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 61/396 (15%), Positives = 121/396 (30%), Gaps = 34/396 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P Y++D+  L           +        ++ A K ++   +   ++    G    S
Sbjct: 56  GSPLYILDEYTLRTTCCQYRDSFQKYYGGESLVIYASKAWSCMAICAIVDSEGLGFDVVS 115

Query: 60  LYEVML-GHEKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
             E+          +   ++       E++  L    TII +   +L   K     ++  
Sbjct: 116 GGELYTTLKAGVSPQKIYFHGNNKSREELNFALDQGVTIIVDNFFELELLKALTGDRQTT 175

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCE 168
            KI LR+ P +              S+ G              ++E  N  GL  H   +
Sbjct: 176 AKIILRLTPGIECHTHEYIRTGHLDSKFGFDPNQIEAAFALVSQAEFLNCIGLHAHIGSQ 235

Query: 169 NKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
                    +   +   +     +    E ++LGGG+     +       +   +   + 
Sbjct: 236 IFEQQPHKDLGDVLAGWYKKAADYGLNPEILNLGGGLGIRYTESDDPPSIEAWSQNVAQS 295

Query: 226 S-----------VQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDY 272
                        ++ +EPG ++V +      TV    +   I+  V VD  +  +    
Sbjct: 296 LEAACRSHGIPLPKLIVEPGRSLVGSACVTAYTVGSRKVVPEIRTYVSVDGGMSDNPRPI 355

Query: 273 LLY----QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
                     A         T  V G+ C +GD+  +       + GD +       YN 
Sbjct: 356 TYQSLYRAVIANRLSAPCEETVTVAGKHCESGDVVIKDAQLPTPQPGDILVVLATGAYNY 415

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +  + +N I  P   + N       IR  +  D   
Sbjct: 416 SMASNYNRIGRPAAVLVNEGEAQLIIRRETLEDLVR 451


>gi|76818456|ref|YP_335638.1| Rieske family iron-sulfur cluster-binding protein
            /carboxynorspermidine decarboxylase [Burkholderia
            pseudomallei 1710b]
 gi|76582929|gb|ABA52403.1| iron-sulfur cluster-binding protein, rieske
            family/carboxynorspermidine decarboxylase [Burkholderia
            pseudomallei 1710b]
          Length = 1076

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%)

Query: 2    IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            + TP ++ D++ L + L +   +  ++G +LL  LK F+  G  + +  ++DG  +SS +
Sbjct: 696  LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 755

Query: 62   EVMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E           G  H    A +D ++  ++ NCD +  N++SQ  +  D A       G
Sbjct: 756  EAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 814

Query: 120  LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173
            LRINP  S       DP RP S+LG                +  + G+ FH NC++  F 
Sbjct: 815  LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 874

Query: 174  CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
              +  ++++EK     +  + WI+LGGG       Y  +      K   E + V +++EP
Sbjct: 875  RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 933

Query: 234  GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291
            G AIV    T+  +V+D+ ++    + V  +   H P+   YQ    +  +     +  +
Sbjct: 934  GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 993

Query: 292  VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
            + G SCLAGD+FG + F+ P+++G R++F +   Y + + + FNGIN+P++  +  DG +
Sbjct: 994  LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1053

Query: 352  KAIREFSYNDYYN 364
             A++ FSY D+  
Sbjct: 1054 AAVQRFSYEDFLR 1066


>gi|318040226|ref|ZP_07972182.1| diaminopimelate decarboxylase [Synechococcus sp. CB0101]
          Length = 466

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 47/394 (11%), Positives = 110/394 (27%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP Y++D+  L            +        L A K  ++  +   +     G  + S
Sbjct: 61  GTPLYVLDEATLRGTAQAYRKALASHYPGSALALYASKANSSLAITAVVASEGLGLDAVS 120

Query: 60  LYEVMLGHEK-FGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             E++   +     E   ++       E+   +    T++ +    + +          +
Sbjct: 121 AGELLTAVQGGMPPERIVFHGNNKSLEELRLAVELGVTVVADNWLDIEQLASLEMAQPVR 180

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCENK 170
           + LR  P +              S+ G              +     V+GL  H   +  
Sbjct: 181 LMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQLEGVLQHLKQCSWAQVSGLHAHIGSQIF 240

Query: 171 SFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--- 224
                  +   +             +  +++GGG+     +               +   
Sbjct: 241 ELQPHRDLAAVMADALKLAREMGHPVSDLNVGGGLGIRYVESDDPPSIDAWVLTVAEAVA 300

Query: 225 --------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDYLL 274
                      ++  EPG ++V  +     +V    +         VD  +  +      
Sbjct: 301 AACQERGLDLPRLLCEPGRSLVATSGVTLYSVGSRKDIPGIRTYLSVDGGMSDNPRPITY 360

Query: 275 YQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
             +   +  +        +  + G+ C +GD+  +     P   GD ++      YN + 
Sbjct: 361 QSQYTAVLADRPEAEPSDSVTLAGKHCESGDVLLKDLALPPATSGDVLAVFATGAYNASM 420

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            + +N I  P   + +   +    R     D   
Sbjct: 421 SSNYNRIPRPAAVMVHNGLSEVVQRREQPEDLLR 454


>gi|134282506|ref|ZP_01769210.1| iron-sulfur cluster-binding protein, rieske family/putative
            carboxynorspermidine decarboxylase [Burkholderia
            pseudomallei 305]
 gi|134246063|gb|EBA46153.1| iron-sulfur cluster-binding protein, rieske family/putative
            carboxynorspermidine decarboxylase [Burkholderia
            pseudomallei 305]
          Length = 1110

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%)

Query: 2    IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            + TP ++ D++ L + L +   +  ++G +LL  LK F+  G  + +  ++DG  +SS +
Sbjct: 730  LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 789

Query: 62   EVMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E           G  H    A +D ++  ++ NCD +  N++SQ  +  D A       G
Sbjct: 790  EAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 848

Query: 120  LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173
            LRINP  S       DP RP S+LG                +  + G+ FH NC++  F 
Sbjct: 849  LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 908

Query: 174  CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
              +  ++++EK     +  + WI+LGGG       Y  +      K   E + V +++EP
Sbjct: 909  RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 967

Query: 234  GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291
            G AIV    T+  +V+D+ ++    + V  +   H P+   YQ    +  +     +  +
Sbjct: 968  GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 1027

Query: 292  VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
            + G SCLAGD+FG + F+ P+++G R++F +   Y + + + FNGIN+P++  +  DG +
Sbjct: 1028 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1087

Query: 352  KAIREFSYNDYYN 364
             A++ FSY D+  
Sbjct: 1088 AAVQRFSYEDFLR 1100


>gi|312139160|ref|YP_004006496.1| diaminopimelate decarboxylase lysa [Rhodococcus equi 103S]
 gi|311888499|emb|CBH47811.1| diaminopimelate decarboxylase LysA [Rhodococcus equi 103S]
          Length = 473

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 59/406 (14%), Positives = 120/406 (29%), Gaps = 45/406 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +++D+    +           A  ++  A K F +  +   +         +S  E
Sbjct: 64  GTPLFVVDEDDFRSRCREMARAFGGAE-RVHYASKAFLSAEIARWVRDEGLSMDVASGGE 122

Query: 63  VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           + +     F  E    +   K       AV +    I+ +++ ++ +  + A  + + + 
Sbjct: 123 LAVALHAGFPAERITMHGNNKSVAELDAAVAAGVGHIVLDSMVEIERLDEVAARRGVVQD 182

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + +RI   V               + G                E+    + GL  H   +
Sbjct: 183 VLIRITVGVEAHTHEFIATAHEDQKFGFSLSGGKAMAAVARVFETGNLRLVGLHSHIGSQ 242

Query: 169 NKSFLCFSAMLKNIEKEFGHFIT--------QIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F      +       +         Q+  + LGGG+  +            L  
Sbjct: 243 IFEVDGFELAAHRVIGLMREIVDRFGAEKTSQLSMVDLGGGLGISYLPSDNPPPVAELAA 302

Query: 221 FSEKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDS 263
                              + +EPG AI    T     V  I +        +  V VD 
Sbjct: 303 KLAHIVATESAAAGLPVPTLMVEPGRAIAGPGTVTLYEVGTIKDVTLDAGATRRYVSVDG 362

Query: 264 SVEAHVPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318
            +  ++   L   E      +      P  A V G+ C +GDI     +    +  GD +
Sbjct: 363 GMSDNIRTSLYQAEYDARLVSRDSDGAPVVARVVGKHCESGDIVIRDAWMPDDLGPGDLL 422

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +      Y  +  + +N +  P +       +   +R  +  D  +
Sbjct: 423 AVAATGAYCYSMSSRYNLLTRPAVVAVRDGASRLILRRETVEDLLS 468


>gi|325673535|ref|ZP_08153226.1| diaminopimelate decarboxylase [Rhodococcus equi ATCC 33707]
 gi|325555556|gb|EGD25227.1| diaminopimelate decarboxylase [Rhodococcus equi ATCC 33707]
          Length = 473

 Score =  206 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 59/406 (14%), Positives = 120/406 (29%), Gaps = 45/406 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +++D+    +           A  ++  A K F +  +   +         +S  E
Sbjct: 64  GTPLFVVDEDDFRSRCREMARAFGGAE-RVHYASKAFLSAEIARWVRDEGLSMDVASGGE 122

Query: 63  VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           + +     F  E    +   K       AV +    I+ +++ ++ +  + A  + + + 
Sbjct: 123 LAVALHAGFPAERITMHGNNKSVAELDAAVAAGVGHIVLDSMVEIERLDEVAARRGVVQD 182

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + +RI   V               + G                E+    + GL  H   +
Sbjct: 183 VLIRITVGVEAHTHEFIATAHEDQKFGFSLSGGKAMAAVARVFETGNLRLVGLHSHIGSQ 242

Query: 169 NKSFLCFSAMLKNIEKEFGHFIT--------QIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F      +       +         Q+  + LGGG+  +            L  
Sbjct: 243 IFEVDGFELAAHRVIGLMREIVDRFGAEKTSQLSMVDLGGGLGISYLPSDNPPPVAELAA 302

Query: 221 FSEKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDS 263
                              + +EPG AI    T     V  I +        +  V VD 
Sbjct: 303 KLAHIVATESAAAGLPVPTLMVEPGRAIAGPGTVTLYEVGTIKDVTLDAGATRRYVSVDG 362

Query: 264 SVEAHVPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318
            +  ++   L   E      +      P  A V G+ C +GDI     +    +  GD +
Sbjct: 363 GMSDNIRTSLYQAEYDARLVSRDSDGAPVVARVVGKHCESGDIVIRDAWMPDDLGPGDLL 422

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +      Y  +  + +N +  P +       +   +R  +  D  +
Sbjct: 423 AVAATGAYCYSMSSRYNLLTRPAVVAVRDGASRLILRRETVEDLLS 468


>gi|294791964|ref|ZP_06757112.1| protein TabA [Veillonella sp. 6_1_27]
 gi|294457194|gb|EFG25556.1| protein TabA [Veillonella sp. 6_1_27]
          Length = 418

 Score =  206 bits (523), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 63/393 (16%), Positives = 122/393 (31%), Gaps = 29/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+++ D++ ++ N+ + +     N G K   A+K      +   L +   G   SSL 
Sbjct: 21  PTPFHIYDEEGIIENMKSFINAFSWNKGFKQYFAVKATPNPYIMRLLQKLGVGADCSSLA 80

Query: 62  EVMLG-HEKFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E++L       G    +        E    L     I  + ++ +   +     L     
Sbjct: 81  ELLLCEKVGITGHDIMFTSNDTPYVEYKKALEMGAIINLDDITHIEYLEKNHGSLPDTFC 140

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVNGLMFHNNCENKSFLC- 174
           +R NP                ++ G   +   E+  +     V     H    +      
Sbjct: 141 VRYNPGSLKEGGNTIIGLPEEAKYGMTREQIFEAYKQLQAKGVKHFGIHTMVVSNELDID 200

Query: 175 -----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK----- 224
                                  +E+I LGGG+    K        + L +  E+     
Sbjct: 201 GLVGTAELCFNLAVDIKKELGITVEFIDLGGGVGVAYKPEQTPVDFRVLSKGVEEAYNRI 260

Query: 225 ------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                   V +  E G  +      L +T +   +  ++ + +D+ +   +   L     
Sbjct: 261 LVANGLNDVALAYECGRMVTGPFGYLVSTAIHKKDIYRHYIGLDACMANLMRPALYGSYH 320

Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        + IGDR+   D   +  +    +
Sbjct: 321 HITVMGKENAPKDHVYDVTGSLCENNDKFAIQRELPKIDIGDRVIIHDAGAHGHSMGFNY 380

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       + + DG++  IR   +Y+D +  L
Sbjct: 381 NGKLRSAELLLHKDGSVTQIRRAETYDDLFGTL 413


>gi|294793828|ref|ZP_06758965.1| protein TabA [Veillonella sp. 3_1_44]
 gi|294455398|gb|EFG23770.1| protein TabA [Veillonella sp. 3_1_44]
          Length = 418

 Score =  206 bits (523), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 63/393 (16%), Positives = 122/393 (31%), Gaps = 29/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+++ D++ ++ N+ + +     N G K   A+K      +   L +   G   SSL 
Sbjct: 21  PTPFHIYDEEGIIENMKSFINAFSWNKGFKQYFAVKATPNPYIMRLLQKLGVGADCSSLA 80

Query: 62  EVMLG-HEKFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E++L       G    +        E    L     I  + ++ +   +     L     
Sbjct: 81  ELLLCEKVGITGHDIMFTSNDTPYVEYKKALEMGAIINLDDITHIEYLEKNHGSLPDTFC 140

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVNGLMFHNNCENKSFLC- 174
           +R NP                ++ G   +   E+  +     V     H    +      
Sbjct: 141 VRYNPGSLKEGGNTIIGLPEEAKYGMTREQIFEAYKQLQAKGVKHFGIHTMVVSNELDID 200

Query: 175 -----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK----- 224
                                  +E+I LGGG+    K        + L +  E+     
Sbjct: 201 GLVGTAELCFNLAVDIKKELGITVEFIDLGGGVGVAYKPEQTPVDFRVLSKGVEEAYNRI 260

Query: 225 ------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                   V +  E G  +      L +T +   +  ++ + +D+ +   +   L     
Sbjct: 261 LVANGLNDVALAYECGRMVTGPFGYLVSTAIHKKDIYRHYIGLDACMANLMRPALYGSYH 320

Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        + IGDR+   D   +  +    +
Sbjct: 321 HITVMGKENDPKDHVYDVTGSLCENNDKFAIQRELPKIDIGDRVIIHDAGAHGHSMGFNY 380

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       + + DG++  IR   +Y+D +  L
Sbjct: 381 NGKLRSAELLLHKDGSVTQIRRAETYDDLFGTL 413


>gi|213970713|ref|ZP_03398838.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato T1]
 gi|301382601|ref|ZP_07231019.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato
           Max13]
 gi|302059222|ref|ZP_07250763.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato K40]
 gi|302133620|ref|ZP_07259610.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|213924547|gb|EEB58117.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato T1]
          Length = 412

 Score =  206 bits (523), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 57/399 (14%), Positives = 113/399 (28%), Gaps = 45/399 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D Q +   +             +  A K  +   +   L        + SL E
Sbjct: 17  GTPLWVYDGQLIKKRVQQLA-AFD----TVRFAQKACSNLHILRLLRDAGAAVDAVSLGE 71

Query: 63  VMLGH-EKFGGE-------THAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114
           +       F  +              +    +  V+     +   ++  L++    A   
Sbjct: 72  LERALHAGFSAQNAQGTAGVVFTADVFDRATLQRVVEAQVEVNVGSIDMLHQLG--ALSP 129

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCE 168
             ++ LRINP   +      +     S+ G            +     ++ GL  H    
Sbjct: 130 GHRVWLRINPGFGHGHSRKTNTGGENSKHGIWHTHLQDALTLVRYYRLHLVGLHMHIGSG 189

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----------KDYPVKDFCQRL 218
              +     +   + +        IE IS GGG+                +   D  ++ 
Sbjct: 190 VD-YQHLQQVCSTMAELVVEMDHDIEAISAGGGLSVPYRAGELPINTSHYFAQWDHARKR 248

Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQE 277
            E    + +++ +EPG  +V     L + V             VD+     +   L    
Sbjct: 249 IEAHLGHPIRLEIEPGRFLVAQAGVLVSEVRATKHMGGKHFTLVDAGFNDLMRPSLYGSY 308

Query: 278 SATIYPNTGPYT-----AMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAG 325
                  +          +V G  C +GD+F        E       ++GD + F D   
Sbjct: 309 HEMSLITSRDEPLPMQETVVAGPLCESGDVFTQAEGGIVESRLLPAAQVGDYLVFHDAGA 368

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  + +N        + +        R    +D   
Sbjct: 369 YGASMSSNYNSRTHAAEVLVDDGQERLIRRRQPLDDLLR 407


>gi|254265028|ref|ZP_04955893.1| iron-sulfur cluster-binding protein, rieske family/putative
            carboxynorspermidine decarboxylase [Burkholderia
            pseudomallei 1710a]
 gi|254216030|gb|EET05415.1| iron-sulfur cluster-binding protein, rieske family/putative
            carboxynorspermidine decarboxylase [Burkholderia
            pseudomallei 1710a]
          Length = 1128

 Score =  206 bits (523), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%)

Query: 2    IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            + TP ++ D++ L + L +   +  ++G +LL  LK F+  G  + +  ++DG  +SS +
Sbjct: 748  LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 807

Query: 62   EVMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E           G  H    A +D ++  ++ NCD +  N++SQ  +  D A       G
Sbjct: 808  EAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 866

Query: 120  LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173
            LRINP  S       DP RP S+LG                +  + G+ FH NC++  F 
Sbjct: 867  LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 926

Query: 174  CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
              +  ++++EK     +  + WI+LGGG       Y  +      K   E + V +++EP
Sbjct: 927  RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 985

Query: 234  GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291
            G AIV    T+  +V+D+ ++    + V  +   H P+   YQ    +  +     +  +
Sbjct: 986  GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 1045

Query: 292  VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
            + G SCLAGD+FG + F+ P+++G R++F +   Y + + + FNGIN+P++  +  DG +
Sbjct: 1046 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1105

Query: 352  KAIREFSYNDYYN 364
             A++ FSY D+  
Sbjct: 1106 AAVQRFSYEDFLR 1118


>gi|78213154|ref|YP_381933.1| diaminopimelate decarboxylase [Synechococcus sp. CC9605]
 gi|78197613|gb|ABB35378.1| diaminopimelate decarboxylase [Synechococcus sp. CC9605]
          Length = 459

 Score =  206 bits (523), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 47/395 (11%), Positives = 111/395 (28%), Gaps = 34/395 (8%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           TP Y++D+  +                     + A K  ++  M         G  + S 
Sbjct: 53  TPLYVLDEATVRATCRAYREALNKHYAGPSLPIYASKANSSLVMSSLAASEGLGLDAVSA 112

Query: 61  YEVMLG-HEKFGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHK 116
            E++        G+    +     D E+    +N  TI+ +    L++  +   A     
Sbjct: 113 GELLTALRGGMPGDRMVLHGNNKSDEELLLAYANKVTIVVDNQHDLDRLAELVPAGSEPA 172

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCEN 169
           ++ LR  P +              S+ G             +      + GL  H   + 
Sbjct: 173 RLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQVEPVLRSLVGQPWAQLTGLHAHIGSQI 232

Query: 170 KSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-- 224
                   +   +  +          +  +++GGG+     +       ++  +   +  
Sbjct: 233 FELEPHRDLAAVMADKLKLARDLGHPVTDLNVGGGLGIRYVESDDPPSIEQWIKVVAEAV 292

Query: 225 ---------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDYL 273
                       ++  EPG ++V        +V              +D  +  +     
Sbjct: 293 TSACQERGLELPRLMCEPGRSLVATAGVTLYSVGSRKTIPNVRTYVAIDGGMSDNPRPIT 352

Query: 274 LYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
                     +        +  + G+ C +GD+  +       + GD ++      YN +
Sbjct: 353 YQSLYTCCLADRPLAKPDESVNLVGKHCESGDVLLKDLSLPTTESGDIVAVFATGAYNAS 412

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             + +N I  P   + +        +    +D   
Sbjct: 413 MSSNYNRIPRPAAVLVHDGSAELVQKREQPDDLLR 447


>gi|257056970|ref|YP_003134802.1| diaminopimelate decarboxylase [Saccharomonospora viridis DSM 43017]
 gi|256586842|gb|ACU97975.1| diaminopimelate decarboxylase [Saccharomonospora viridis DSM 43017]
          Length = 479

 Score =  206 bits (523), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 56/412 (13%), Positives = 119/412 (28%), Gaps = 51/412 (12%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ID+              ++    +  A K F    +   + +        S  E
Sbjct: 65  GTPLFVIDEVDFKARCAEYAEAFEDP-ALVHYAAKAFLCTEVARWVAEKGLSLDVCSGGE 123

Query: 63  VMLG-HEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +    +F  E   ++   K       AV +    ++ ++  ++ +  + AQ+    ++
Sbjct: 124 LAVAQRAQFPPERITFHGNNKSLAELEAAVEAGVGLVVLDSYYEIARLAEIAQRHGVVQQ 183

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G         E  +  + S    + GL  H   +
Sbjct: 184 VLVRVTVGVEAHTHEFIATAHEDQKFGFSLASGDAAEAVRRVLNSPSLKLVGLHSHIGSQ 243

Query: 169 NKSFLCFSAMLKNIEKEFGH----FITQI----EWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F    + +             ++      I LGGG   +  D        ++  
Sbjct: 244 IFDTDGFEVAARRVVGLLAELRKEHGPELIEQLSVIDLGGGFGISYTDRDNPPPPAQMIT 303

Query: 221 FSEKYSVQIYL-----------EPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDS 263
              +   +              EPG AI    T     V  I +        +  V VD 
Sbjct: 304 QIREIVRKECAFADLPVPRIAGEPGRAIAGPGTVTLYEVGTIKDVTLGEGTSRRYVSVDG 363

Query: 264 SVEAHVPDYLLYQESATIYPNT----------GPYTAMVCGRSCLAGDIFGEFHFEKP-V 312
            +  ++   L          +               + V G+ C +GDI     +    +
Sbjct: 364 GMSDNIRTALYDAAYDCRLVSRSSDDGQPGEVKAVLSRVVGKHCESGDIVVRDCWLPDTL 423

Query: 313 KIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             GD ++      Y  +  + +N    P +           +R  +  D + 
Sbjct: 424 APGDLLAVAATGAYCYSMASNYNKQPKPAVVAVRNGNHRLLLRRETNEDMFR 475


>gi|256370697|ref|YP_003108522.1| diaminopimelate decarboxylase [Candidatus Sulcia muelleri SMDSEM]
 gi|256009489|gb|ACU52849.1| diaminopimelate decarboxylase [Candidatus Sulcia muelleri SMDSEM]
          Length = 402

 Score =  206 bits (523), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 62/388 (15%), Positives = 120/388 (30%), Gaps = 28/388 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP Y+ + +K+ +               K+  A K      +   L +   G  + S+ 
Sbjct: 13  GTPLYVYNAKKIEDQYKLMKKSFSYIKNFKINYACKANTNISILKFLKKLGSGLDTVSIQ 72

Query: 62  EVMLGH-EKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           EV +G    F  +   Y        EI   +     I  + +S L +  +  +K +  IG
Sbjct: 73  EVEIGLKAGFKPKEIIYTPNGVSLEEIKKAIKAGVLINLDNLSLLEQIGN--EKTNYPIG 130

Query: 120 LRINPSVSYSKFILADPNRPFSRLGE------KCKDKIESEIKNVNGLMFHNNCENKSFL 173
           +RI P +              S+ G         K  I++    + G+  H   +    +
Sbjct: 131 IRITPHIMGGGNKKISVGHIDSKFGISYYQLPHIKKIIKNTGLKIEGIHMHTGSDI-IDM 189

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-------- 225
                +        +    +++I  G G     K    K     L  F +K         
Sbjct: 190 GVFFQIAERLLNVANLFKTLKYIDFGSGFKVPYKQSDYKTDLDLLAFFLKKKLSIFFEKN 249

Query: 226 ---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATI 281
               ++++ EPG+ +++ +      V  I +        VDS     +            
Sbjct: 250 YYKKIKLFFEPGKFLMSESGFFLVKVNVIKQTTSTVFACVDSGFNHFIRPMFYDSYHQID 309

Query: 282 YPNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
             +          V G  C + D F        ++ GD + F +   Y  +  + +N   
Sbjct: 310 NISNPLGKLRFYTVVGYICES-DTFCVNRPINEIREGDILCFRNAGAYCFSMSSHYNSRY 368

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYNNL 366
            P   +          +  +  D  NN+
Sbjct: 369 KPAEVLLYKKKDFLIRKRENMQDLLNNM 396


>gi|167850070|ref|ZP_02475578.1| iron-sulfur cluster-binding protein, rieske
           family/carboxynorspermidine decarboxylase [Burkholderia
           pseudomallei B7210]
          Length = 409

 Score =  206 bits (523), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP ++ D++ L + L +   +  ++G +LL  LK F+  G  + +  ++DG  +SS +
Sbjct: 29  LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 88

Query: 62  EVMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E           G  H    A +D ++  ++ NCD +  N++SQ  +  D A       G
Sbjct: 89  EAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 147

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173
           LRINP  S       DP RP S+LG                +  + G+ FH NC++  F 
Sbjct: 148 LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 207

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
             +  ++++EK     +  + WI+LGGG       Y  +      K   E + V +++EP
Sbjct: 208 RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 266

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291
           G AIV    T+  +V+D+ ++    + V  +   H P+   YQ    +  +     +  +
Sbjct: 267 GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 326

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
           + G SCLAGD+FG + F+ P+++G R++F +   Y + + + FNGIN+P++  +  DG +
Sbjct: 327 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 386

Query: 352 KAIREFSYNDYYN 364
            A++ FSY D+  
Sbjct: 387 AAVQRFSYEDFLR 399


>gi|23394392|gb|AAN31485.1| diaminopimelate decarboxylase [Phytophthora infestans]
          Length = 422

 Score =  205 bits (522), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 55/395 (13%), Positives = 115/395 (29%), Gaps = 32/395 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D+Q + +N    L   +      +   A+K      +   L+Q   G   SS 
Sbjct: 21  GTPLQIYDEQLIRDNARRLLTAFRAHFPDFQQFYAVKALPNPAILKLLHQEGCGMDCSSS 80

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDK--AQKLHK 116
            E+ +  E    G+   +   +               +  + VS ++             
Sbjct: 81  AELHIVKELGVPGDQVIFTSNFTAKNDLGTAFDQGVIMNLDDVSLVDSLVAVRGKCPELM 140

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENK 170
              L      + S+        P ++ G      +E+  K         G+         
Sbjct: 141 SFRLNPGIGRTDSETKSNVLGGPDAKFGVPPFQIVEAYRKAQQAGAKGFGIHMMTGSCVM 200

Query: 171 SFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-- 224
           +   +   +  +             + E++++GGG+    ++       + + +   +  
Sbjct: 201 NQEYWRETVTVLFNTIVQLKKELGIEFEFMNIGGGLGIPYREDQEPVNVEAIAKMLREVF 260

Query: 225 ----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLL 274
                        ++ +E G  +      L T    I E       VD+ +   +   + 
Sbjct: 261 DEAVKEHGLQTLPRLCMENGRFMTGPFGWLVTRCEAIKETYGRYYGVDACMAHLMRPGMY 320

Query: 275 YQESATIYPNTGPYTA---MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                   P           V G  C   D F +       ++GD     D   ++ +  
Sbjct: 321 GAFHHISIPARANEEVSPSHVVGTLCENNDWFAKDRPLPKAQVGDLFVIHDTGAHSHSMG 380

Query: 332 NWFNGINMPTIAVKNVDGTIKAIR-EFSYNDYYNN 365
             +NG       +   DG+   IR   +Y+  Y N
Sbjct: 381 FQYNGKLRAPEVLLRADGSDSLIRERETYDALYGN 415


>gi|293366637|ref|ZP_06613314.1| diaminopimelate decarboxylase [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|291319406|gb|EFE59775.1| diaminopimelate decarboxylase [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329736965|gb|EGG73222.1| diaminopimelate decarboxylase [Staphylococcus epidermidis VCU045]
          Length = 421

 Score =  205 bits (522), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 56/394 (14%), Positives = 120/394 (30%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D+ ++ N +       + +G    +  A K F    M   +++        S 
Sbjct: 26  GTPSIVYDEDQIRNQIRRYHKAFEASGLSYNISYASKAFTCIQMVKLIDEENLQLDVVSE 85

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    E  F  +   ++   K          +     + +T+ ++      A   +  
Sbjct: 86  GELYTALEAGFDSKRIHFHGNNKTKREIQYALDNQIGYFVVDTLEEIELIDKYADS-NVD 144

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168
           + LR+NP V           +  S+ G   K             ++   + G+ FH   +
Sbjct: 145 VVLRVNPGVEAHTHEFIQTGQEDSKFGLSIKHGLALNAVNKVKATKHLQLKGIHFHIGSQ 204

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ-----------R 217
            +         K +         ++  +++GGG      +       +            
Sbjct: 205 IEGTEPMIKTAKIVLNWLASERIEVSLLNIGGGFGIKYVEGDESFPIEQGISEITEAIKE 264

Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLY 275
             +  +    +I +EPG +IV         V  I +       V     +  H+   L  
Sbjct: 265 TAQALQYNIPEIGIEPGRSIVGEAGITLYEVGTIKDIPGVNKYVSVDGGMSDHIRTALYG 324

Query: 276 QESATI---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331
            +   +          +  + G+ C +GDI          V  GD ++      Y+ +  
Sbjct: 325 AQYEALLVNRNEKANESVTIAGKLCESGDIIVRDAPLPSSVHRGDYLAILSTGAYHYSMA 384

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + +N +  P +         + I+  S      N
Sbjct: 385 SNYNQMQKPPVFFLKDGKAREVIKRQSLRQLIIN 418


>gi|254254367|ref|ZP_04947684.1| Diaminopimelate decarboxylase [Burkholderia dolosa AUO158]
 gi|124899012|gb|EAY70855.1| Diaminopimelate decarboxylase [Burkholderia dolosa AUO158]
          Length = 424

 Score =  205 bits (522), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 57/400 (14%), Positives = 119/400 (29%), Gaps = 46/400 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   + + +             +  A K  +   +   +        + SL E
Sbjct: 28  GTPLWVYDADVIRDRIAQLRQFDV-----IRYAQKANSNVHILKLMRDEGACVDAVSLGE 82

Query: 63  VMLGHEKF-----GGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHK 116
           +              E   +     D    A +  +  T+   ++  L +  + A     
Sbjct: 83  IERSLAAGFSPAGEPEGVVFTADLIDRPTLAAVLKHRVTVNAGSLDMLARVGEHA--PGH 140

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170
           ++ LR+NP   +      +   P S+ G    D       +      + G+  H      
Sbjct: 141 RVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVRRYGLKLVGIHMHIGSGVD 200

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEF 221
            +   S +   +          I+ IS GGG+               Y  +    R +  
Sbjct: 201 -YGHLSQVCDAMVGLVTSLGHDIDAISAGGGLSIPYRDGEPRVDVGHYFSQWDAARKRIE 259

Query: 222 SE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279
               ++V+I +EPG  +V    TL   V  ++   K+  + +D+     +   +     A
Sbjct: 260 RHLGHAVRIEIEPGRFLVAEAGTLVAEVQAVNRRPKHDFVLIDAGFNDLMRPSMYGSYHA 319

Query: 280 TIYPNTGP--------YTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324
                               + G  C +GD+F +              +IGD +   D  
Sbjct: 320 VSVHAHDGALPEGRPLVDLAIAGPLCESGDVFTQDAGGVVTHRKLPQPQIGDLLFVHDAG 379

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            Y  +  + +N   +    + +        R  +  +   
Sbjct: 380 AYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIGELLA 419


>gi|329939819|ref|ZP_08289120.1| diaminopimelate decarboxylase [Streptomyces griseoaurantiacus M045]
 gi|329301389|gb|EGG45284.1| diaminopimelate decarboxylase [Streptomyces griseoaurantiacus M045]
          Length = 463

 Score =  205 bits (522), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 59/399 (14%), Positives = 122/399 (30%), Gaps = 37/399 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y++D++                   +  A K F +  +   L++        S  
Sbjct: 62  VGTPAYVLDEEDFRARARAWRTAF-GHDADVFYAGKAFLSRAVVRWLDEEGLNLDVCSGG 120

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+          +  A++   K       AV +    I+ ++  ++ +    A++L K+ 
Sbjct: 121 ELATALSAGLAPDRIAFHGNNKTPAEIRRAVEAGVGRIVLDSFQEIVRVAHLARELGKRQ 180

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNC 167
              +R+   V               + G            +  ++ +  +V G+  H   
Sbjct: 181 RVQIRVTVGVEAHTHEFIATAHEDQKFGIPLAGGQAAEAVRRALQLDSLDVIGIHSHIGS 240

Query: 168 ENKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223
           +      F          ++        ++  I LGGG+               + +   
Sbjct: 241 QIFDMSGFEVAAHRVVGLLKDIRDEHGVELPEIDLGGGLGIAYTSEDDPREPHEIAKALT 300

Query: 224 K-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVP 270
           +            + +I +EPG AI   T      V  +      +  V VD  +  ++ 
Sbjct: 301 EIVTRECEAARLRTPRISVEPGRAIAGPTAFTLYEVGTVKPLEGLRTYVSVDGGMSDNIR 360

Query: 271 DYLLYQESATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAG 325
             L   E +        +  P    V G+ C +GDI  +  F    +  GD I+      
Sbjct: 361 TALYDAEYSVALVSRTSDAEPMLVRVVGKHCESGDIVVKDAFLPADLAPGDLIAVPATGA 420

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  + +N    P +           +R  +  D   
Sbjct: 421 YCRSMASNYNHALRPPVVAVREGEARVIVRRETEEDLLR 459


>gi|167828611|ref|ZP_02460082.1| iron-sulfur cluster-binding protein, rieske family/putative
           carboxynorspermidine decarboxylase [Burkholderia
           pseudomallei 9]
          Length = 413

 Score =  205 bits (522), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP ++ D++ L + L +   +  ++G +LL  LK F+  G  + +  ++DG  +SS +
Sbjct: 33  LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 92

Query: 62  EVMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E           G  H    A +D ++  ++ NCD +  N++SQ  +  D A       G
Sbjct: 93  EAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 151

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173
           LRINP  S       DP RP S+LG                +  + G+ FH NC++  F 
Sbjct: 152 LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 211

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
             +  ++++EK     +  + WI+LGGG       Y  +      K   E + V +++EP
Sbjct: 212 RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 270

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291
           G AIV    T+  +V+D+ ++    + V  +   H P+   YQ    +  +     +  +
Sbjct: 271 GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 330

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
           + G SCLAGD+FG + F+ P+++G R++F +   Y + + + FNGIN+P++  +  DG +
Sbjct: 331 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 390

Query: 352 KAIREFSYNDYYN 364
            A++ FSY D+  
Sbjct: 391 AAVQRFSYEDFLR 403


>gi|167821815|ref|ZP_02453495.1| iron-sulfur cluster-binding protein, rieske
           family/carboxynorspermidine decarboxylase [Burkholderia
           pseudomallei 91]
          Length = 417

 Score =  205 bits (522), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP ++ D++ L + L +   +  ++G +LL  LK F+  G  + +  ++DG  +SS +
Sbjct: 37  LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 96

Query: 62  EVMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E           G  H    A +D ++  ++ NCD +  N++SQ  +  D A       G
Sbjct: 97  EAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 155

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173
           LRINP  S       DP RP S+LG                +  + G+ FH NC++  F 
Sbjct: 156 LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 215

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
             +  ++++EK     +  + WI+LGGG       Y  +      K   E + V +++EP
Sbjct: 216 RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 274

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291
           G AIV    T+  +V+D+ ++    + V  +   H P+   YQ    +  +     +  +
Sbjct: 275 GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 334

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
           + G SCLAGD+FG + F+ P+++G R++F +   Y + + + FNGIN+P++  +  DG +
Sbjct: 335 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 394

Query: 352 KAIREFSYNDYYN 364
            A++ FSY D+  
Sbjct: 395 AAVQRFSYEDFLR 407


>gi|124005272|ref|ZP_01690113.1| diaminopimelate decarboxylase [Microscilla marina ATCC 23134]
 gi|123989094|gb|EAY28672.1| diaminopimelate decarboxylase [Microscilla marina ATCC 23134]
          Length = 420

 Score =  205 bits (522), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 63/385 (16%), Positives = 116/385 (30%), Gaps = 24/385 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D   +L  +           +++  A K      +   +     G  + SL E
Sbjct: 23  GTPVYVYDADHILGQIARFREGFSTVNLQIKYACKALTNINIMKLMLSQGLGLDTVSLSE 82

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           V +G    F  +   +       E     +     I    +S L KF  +          
Sbjct: 83  VRMGLAAGFVPQQIVFTPNCVGIEELIEAVELGVKINIENLSNLEKFAQRYGSQVPVCIR 142

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSFLC 174
                 +       +     S+ G       + +         +NG+  H++    +   
Sbjct: 143 LNPHIATQQNADKVNWWHNQSKFGISMDQLAQVKAIETTYNLPINGIHIHSSSVIMTPEV 202

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGI----HFTDKDYPVKDFCQRLKEFSEKYSVQI- 229
           F         +       +E+I  GGGI        +   V +  Q+L    +++  +  
Sbjct: 203 FLQ-GAQTVFDIALGFQNLEFIDFGGGIKVDVGDGQEVIDVVELGQKLDPVFQQFCQKYG 261

Query: 230 -----YLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQESATIY- 282
                + EPG  +V N+ TL T   +       + V VDS     +   +       +  
Sbjct: 262 HTLELWFEPGRFLVGNSGTLLTECKVCKRNGGTDFVGVDSGFNHLIRPMMYDAYHQIVNV 321

Query: 283 --PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
             P        V G  C   D  G+      V+ GD I+ +    Y  +  + +N    P
Sbjct: 322 SNPQGTQKKYTVVGNVCE-IDNLGKDRMLAEVREGDLIALKSAGAYGYSMASTYNSRFRP 380

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              +          +  +Y D   N
Sbjct: 381 AEVLVLNGEAKLIRKRDTYEDLMRN 405


>gi|260888729|ref|ZP_05899992.1| diaminopimelate decarboxylase [Selenomonas sputigena ATCC 35185]
 gi|260861482|gb|EEX75982.1| diaminopimelate decarboxylase [Selenomonas sputigena ATCC 35185]
          Length = 505

 Score =  205 bits (522), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 61/393 (15%), Positives = 113/393 (28%), Gaps = 31/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+++ D++ +  N                  A+K      +   L++   GT  SS+ 
Sbjct: 104 PTPFHIYDEKAIRENFRRFKRAFSWAPNFTEHFAVKAAPNPRLLQILHEEGAGTDCSSIA 163

Query: 62  EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E++L       GE            E          I  + +S ++  +  A        
Sbjct: 164 ELLLSEAAGIKGEEIMLTSNDTPAEEFQKARELGAIINLDDISHIDYLEKCAGFPD--CL 221

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFHNNCENKSFLCF 175
                     +          ++ G       ++      K V     H    +      
Sbjct: 222 SFRYNPGPLIEGNDIIGKPTEAKYGLTHHQIFDAYKIAREKGVKRFGLHTMVISSELRNE 281

Query: 176 SA------MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
           +       M     +        +E+++LGGG     +        +R+    E    +I
Sbjct: 282 AFLFTAELMFNLAVEIKKRLGISLEFVNLGGGFGIPYRPEEEAIDVERVGSGIEALYKKI 341

Query: 230 Y-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                        E G  I      L TT L   +  K+ + +D+ +   +   L     
Sbjct: 342 IEPAGLAGLAIKAESGRYITGPYGWLVTTALHEKKTYKDYIGLDACMANLMRPALYGAYH 401

Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   + G  C   D F        + IGDRI   D   +       +
Sbjct: 402 HITVVGKEDAFCDHIYDITGSLCENNDKFAIDRKLPKIDIGDRIVIHDTGAHGHAMGFNY 461

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       +   DG+++ IR   +  DY+  L
Sbjct: 462 NGKLRSAELLLREDGSVELIRRAETLGDYFATL 494


>gi|302392019|ref|YP_003827839.1| Orn/DAP/Arg decarboxylase 2 [Acetohalobium arabaticum DSM 5501]
 gi|302204096|gb|ADL12774.1| Orn/DAP/Arg decarboxylase 2 [Acetohalobium arabaticum DSM 5501]
          Length = 412

 Score =  205 bits (522), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 66/393 (16%), Positives = 125/393 (31%), Gaps = 30/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D+Q +  N          N G K   A+K      +   L +   G   SSL 
Sbjct: 19  PTPFHLYDEQGIRENARKLNEAFAWNDGFKEYFAVKATPNPTILKILQEEGCGVDCSSLT 78

Query: 62  EVMLGHE-KFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+M+  +  F G+   ++       + +        I  + ++ ++  ++ A    + I 
Sbjct: 79  ELMMSDKVGFSGDDIMFSSNVTPKEDYELASKLDAIINLDDITHIDFLEEVAGIPER-IS 137

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173
            R NP  ++        N   ++ G            ++ +     GL         +  
Sbjct: 138 CRYNPGNNFKSDNDIMDNPAEAKYGFTYPQLVEGFKKLQDKGAKEFGLHAFLASNTTADE 197

Query: 174 CF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
            +      + +   K       +I +I+L GGI    +          + E   +   +I
Sbjct: 198 YYPALARILFETAVKLNKETGAEIGFINLSGGIGIPYRPEEEPADIMAIGEGVREAYEEI 257

Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                      + E G  ++     L TT +      K+ V +D+     +   +     
Sbjct: 258 LVPAGLDDVAIFTELGRFMLGPYGCLVTTAIHKKHIYKDYVGLDACAADLMRPAMYGAYH 317

Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        V  GD +   D   +       +
Sbjct: 318 HISVMGKEDQPHDHKYDVTGGLCENNDKFAIDRMLPKVDKGDLLVIHDTGAHGYAMGYNY 377

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       +   DG+ K IR   + +DY+  L
Sbjct: 378 NGKLRSAEVLLQEDGSTKLIRRAETPDDYFATL 410


>gi|329667404|gb|AEB93352.1| Diaminopimelate decarboxylase [Lactobacillus johnsonii DPC 6026]
          Length = 434

 Score =  205 bits (522), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 67/398 (16%), Positives = 131/398 (32%), Gaps = 38/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D  ++ N +     + +       +  A K FA+  M+   N+    T   S 
Sbjct: 30  GTPLVVYDVSQIRNQIRAFKKVFEEEQVNYAVSYASKAFASIAMYQVANEEEAYTDVVSA 89

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+    +  F  E  +++   K  E   +   ++   I+ +   ++N        Q   
Sbjct: 90  GELYTAMKANFPMERVSFHGNNKSKEELEMAVKNHVGKIMIDNFYEINLLNQVLEEQDSE 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNN 166
             + LRI P +S          +  S+ G   K         + ++++  ++ G+  H  
Sbjct: 150 INVMLRITPGISAHTHEYDQTGQVDSKFGFDLKSGQADKALQEVLKNQRMHMLGIHAHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEW----ISLGGGIHFTDKDYPVK--------DF 214
            +      F      +      +    ++    I++GGG                     
Sbjct: 210 SQIFELNGFEMAAAKLVDVAASWRKNYDYTAQVINVGGGFGIKYVQEDHPLKPEEFVKAI 269

Query: 215 CQRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
            + +K+ + K++     I +EPG +IV         V  + E       V VD  +  ++
Sbjct: 270 VKTIKDEATKHNFPLPEIDIEPGRSIVGPAGYNLYKVGSMKEIPGLVPYVAVDGGMGDNI 329

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +  T+              V G+ C +GDI         +K GD ++  D   
Sbjct: 330 RPALYQAKYETVLANDPQRKASQEFHVAGKYCESGDILA-DAKLPLLKAGDILAMLDTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
           Y  +  + +N    P +           IR  S  D  
Sbjct: 389 YGYSMASNYNRNPRPAVVFAEDGKAQVVIRRESLEDLV 426


>gi|295094252|emb|CBK83343.1| Diaminopimelate decarboxylase [Coprococcus sp. ART55/1]
          Length = 433

 Score =  205 bits (522), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 64/392 (16%), Positives = 117/392 (29%), Gaps = 30/392 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           I TP+++ D++ +  N          N G K   A+K      +   L +   GT  SSL
Sbjct: 33  IPTPFHIYDEEGIRENARKLYKAFSWNKGFKEYFAVKATPNPTILKILKEEGCGTDCSSL 92

Query: 61  YEVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E+M+     F G+   ++       E         TI  +  + ++  +  A    K  
Sbjct: 93  TELMMSDKMGFKGDEIMFSSNDTPAEEFVLAKKLNATINLDDFTHIDFLEKAAGIPEKIC 152

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFH------NNCE 168
                         + D     ++ G      IE+      K V     H          
Sbjct: 153 CRFNPGGKFSISTTIMDNPG-DAKYGMTKDQIIEAYKILKAKGVKRFGMHAFLASNTVTN 211

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
                    + +   +       ++++I+L GG+          +    + E   K   +
Sbjct: 212 EYYPTLAKILFETAVEIKEKTGVKLDFINLSGGVGIPYTPDKEPNDIMVIGEGVRKVYEE 271

Query: 229 -----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
                      I+ E G  ++     L TT +      K  + VD+     +   +    
Sbjct: 272 VLVPAGMGDVAIFTELGRFMLAPYGHLVTTAIHEKHTHKEYIGVDACAVNLMRPAMYGAY 331

Query: 278 SATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                         +   V G  C   D F        + +GD +   D   +       
Sbjct: 332 HHITVLGKENEPCDHKYDVTGSLCENNDKFAIDRMLPKIDMGDILVIHDTGAHGFAMGYN 391

Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           +NG       +   DG+ K IR   +  DY+ 
Sbjct: 392 YNGKLKSAEVLLRPDGSFKLIRRAETPEDYFA 423


>gi|28867441|ref|NP_790060.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|28850675|gb|AAO53755.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 412

 Score =  205 bits (522), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 57/399 (14%), Positives = 113/399 (28%), Gaps = 45/399 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D Q +   +             +  A K  +   +   L        + SL E
Sbjct: 17  GTPLWVYDGQLIKKRVQQLA-AFD----TVRFAQKACSNLHILRLLRDAGAAVDAVSLGE 71

Query: 63  VMLGH-EKFGGE-------THAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114
           +       F  +              +    +  V+     +   ++  L++    A   
Sbjct: 72  LERALHAGFSAQTTQGAAGVVFTADVFDRATLQRVVEAQVEVNVGSIDMLHQLG--ALSP 129

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCE 168
             ++ LRINP   +      +     S+ G            +     ++ GL  H    
Sbjct: 130 GHRVWLRINPGFGHGHSRKTNTGGENSKHGIWHTHLQDALTLVHYYRLHLVGLHMHIGSG 189

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----------KDYPVKDFCQRL 218
              +     +   + +        IE IS GGG+                +   D  ++ 
Sbjct: 190 VD-YQHLQQVCSTMAELVVEMDHDIEAISAGGGLSVPYRAGELPINTSHYFAQWDHARKR 248

Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQE 277
            E    + +++ +EPG  +V     L + V             VD+     +   L    
Sbjct: 249 IEAHLGHPIRLEIEPGRFLVAQAGVLVSEVRATKHMGGKHFTLVDAGFNDLMRPSLYGSY 308

Query: 278 SATIYPNTGPYT-----AMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAG 325
                  +          +V G  C +GD+F        E       ++GD + F D   
Sbjct: 309 HEMSLITSRDEPLPMQETVVAGPLCESGDVFTQAEGGIVESRLLPVAQVGDYLVFHDAGA 368

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  + +N        + +        R    +D   
Sbjct: 369 YGASMSSNYNSRTHAAEVLVDDGQERLIRRRQPLDDLLR 407


>gi|107025839|ref|YP_623350.1| diaminopimelate decarboxylase [Burkholderia cenocepacia AU 1054]
 gi|116692977|ref|YP_838510.1| diaminopimelate decarboxylase [Burkholderia cenocepacia HI2424]
 gi|105895213|gb|ABF78377.1| diaminopimelate decarboxylase [Burkholderia cenocepacia AU 1054]
 gi|116650977|gb|ABK11617.1| diaminopimelate decarboxylase [Burkholderia cenocepacia HI2424]
          Length = 412

 Score =  205 bits (522), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 60/400 (15%), Positives = 122/400 (30%), Gaps = 46/400 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   + + +             +  A K  +   +   +        + SL E
Sbjct: 16  GTPLWVYDADVIRDRIAQLRQFDV-----IRYAQKANSNVHILKLMRDEGACVDAVSLGE 70

Query: 63  VMLGHEKF-----GGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHK 116
           +              E   +     D    A +  +  T+   ++  L +  + A     
Sbjct: 71  IERSLAAGFSPSGEPEGVVFTADLIDRPTLAAVLKHGVTVNAGSLDMLARIGEHA--PGH 128

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170
           ++ LR+NP   +      +   P S+ G    D       +      + G+  H      
Sbjct: 129 RVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVRQYGLKLVGIHMHIGSGVD 188

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEF 221
            +   S +   +          I+ IS GGG+               Y  +    R +  
Sbjct: 189 -YGHLSQVCDAMVDLVTSLGHDIDAISAGGGLSIPYRDGEPRVDVGHYFNQWDAARKRIE 247

Query: 222 SE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279
               + V+I +EPG  +V    TL T V  ++   K+  + +D+     +   +     A
Sbjct: 248 RHLGHPVRIEIEPGRFLVAEAGTLVTEVQAVNRRPKHDFVLIDAGFNDLMRPSMYGSYHA 307

Query: 280 TIYP-NTGPYTAM-------VCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324
                + G   A        + G  C +GD+F +              +IGD +   D  
Sbjct: 308 VSVHAHDGALPAGRPLVDLAIAGPLCESGDVFTQDAGGVVTHRKLAQPQIGDLLFLHDAG 367

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            Y  +  + +N   +    + +        R  +  +   
Sbjct: 368 AYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIGELLA 407


>gi|319788956|ref|YP_004090271.1| Orn/DAP/Arg decarboxylase 2 [Ruminococcus albus 7]
 gi|315450823|gb|ADU24385.1| Orn/DAP/Arg decarboxylase 2 [Ruminococcus albus 7]
          Length = 422

 Score =  205 bits (522), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 63/391 (16%), Positives = 122/391 (31%), Gaps = 30/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+++ D++ +  N          N G K   A+K      +   L +   G   SSL 
Sbjct: 19  PTPFHIYDEKGIRENARNLYKAFSWNKGYKEFFAVKATPNPYILQILKEEGCGVDCSSLT 78

Query: 62  EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+ML     F GE   ++       E          I  +  + ++              
Sbjct: 79  ELMLSECCGFKGEDIMFSSNVTPAEEYVKAKEMGAYINLDDFTHIDFLDKLCGIPETICC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE---------SEIKNVN-GLMFHNNCEN 169
            R NP  ++S       N   ++ G   +  IE         ++   ++  L  +     
Sbjct: 139 -RYNPGGTFSISTKIMDNPGDAKYGFTHEQIIEGFRILKEKGAKYFGIHAFLASNTVTNE 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
                   + +   +       + ++I+L GG+    +    ++    + E   K   +I
Sbjct: 198 YYPKLARILFELAVEIKEKVGIEFKFINLSGGVGIAYEPDKPQNDIFAIGEGVHKAFDEI 257

Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                      + E G  ++     L TTV       K    VD+     +   +     
Sbjct: 258 LVPAGLGDVAIFTELGRYMLAPYGHLVTTVKHFKHTYKEYAGVDACACNLMRPAMYGAYH 317

Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        ++IGD +   D   +  +    +
Sbjct: 318 HITVLGKEDKPCDHKYDVTGSLCENNDKFAIDRMLPELEIGDILVIHDAGAHGFSMGYNY 377

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   +G ++ IR   +  DY++
Sbjct: 378 NGRLRSAELLLKENGDVQMIRRAETPADYFS 408


>gi|302530980|ref|ZP_07283322.1| diaminopimelate decarboxylase [Streptomyces sp. AA4]
 gi|302439875|gb|EFL11691.1| diaminopimelate decarboxylase [Streptomyces sp. AA4]
          Length = 444

 Score =  205 bits (521), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 55/397 (13%), Positives = 121/397 (30%), Gaps = 37/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP YL+D++++             A   +  A K      +   + +      + S  E
Sbjct: 50  GTPAYLLDEEQVRETARAYRRALPEAD--VAFASKALCTRAVLRWVAEEGLSLDTCSAGE 107

Query: 63  VMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + +     F  E    +      +    A+      I+ +++ ++ +    A    + + 
Sbjct: 108 IAVARAVGFPAERILLHGNAKTPEDLKAALQYGVGRIVLDSLDEVEQLGALAHGAQR-VL 166

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKD------------KIESEIKNVNGLMFHNNC 167
           +R+ P VS              + G   +              +      + GL  H   
Sbjct: 167 IRVTPGVSGDTHAAITTGTEGQKFGFSLRADVRDNVDRAVAAVLSQPSLQLTGLHCHIGS 226

Query: 168 ENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLK 219
           +      +      M++ + +    +   +  + LGGG      D    + +  + +RL+
Sbjct: 227 QVSRVDRYEEAARRMVEVLVRIRDQYGITLRELDLGGGHAVPYADREASFDLDGYARRLR 286

Query: 220 EFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY 272
                          ++ +EPG AIV         V  +    +  V VD  +  +    
Sbjct: 287 VALGYECSSRDFPLPRLTIEPGRAIVGPAGITVYRVCAVKRGARTFVAVDGGMSDNPRPA 346

Query: 273 LLYQESA----TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
           L                      V GR C +GD+  +      + +GD ++      Y+ 
Sbjct: 347 LYGARYTARLVGRRTKAARTPMTVVGRHCESGDVLADVCLPDDIHVGDLLAVPCTGAYHH 406

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           +  + +N +  P +           +R  +  D    
Sbjct: 407 SLASNYNLVGRPPLVGVRDGHATLLVRRETEEDLLRR 443


>gi|27467998|ref|NP_764635.1| diaminopimelate decarboxylase [Staphylococcus epidermidis ATCC
           12228]
 gi|27315543|gb|AAO04677.1|AE016747_174 diaminopimelate decarboxylase [Staphylococcus epidermidis ATCC
           12228]
          Length = 421

 Score =  205 bits (521), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 56/394 (14%), Positives = 120/394 (30%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D+ ++ N +       + +G    +  A K F    M   +++        S 
Sbjct: 26  GTPSIVYDEDQIRNQIRRYHKAFEASGLSYNISYASKAFTCIQMVKLIDEENLQLDVVSE 85

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    E  F  +   ++   K          +     + +T+ ++      A   +  
Sbjct: 86  GELYTALEAGFDSKRIHFHGNNKTKREIQYALDNQIGYFVVDTLEEIELIDKYADS-NVD 144

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168
           + LR+NP V           +  S+ G   K             ++   + G+ FH   +
Sbjct: 145 VVLRVNPGVEAHTHEFIQTGQEDSKFGLSIKHGLALNAVNKVKATKHLQLKGIHFHIGSQ 204

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ-----------R 217
            +         K +         ++  +++GGG      +       +            
Sbjct: 205 IEGTEAMIKTAKIVLNWLASERIEVSLLNIGGGFGIKYVEGDESFPIEQGISEITEAIKE 264

Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLY 275
             +  +    +I +EPG +IV         V  I +       V     +  H+   L  
Sbjct: 265 TAQALQYNIPEIGIEPGRSIVGEAGITLYEVGTIKDIPGVNKYVSVDGGMSDHIRTALYG 324

Query: 276 QESATI---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331
            +   +          +  + G+ C +GDI          V  GD ++      Y+ +  
Sbjct: 325 AQYEALLVNRNEKANESVTIAGKLCESGDIIVRDAPLPSSVHRGDYLAILSTGAYHYSMA 384

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + +N +  P +         + I+  S      N
Sbjct: 385 SNYNQMQKPPVFFLKDGKAREVIKRQSLRQLIIN 418


>gi|298492876|ref|YP_003723053.1| diaminopimelate decarboxylase ['Nostoc azollae' 0708]
 gi|298234794|gb|ADI65930.1| diaminopimelate decarboxylase ['Nostoc azollae' 0708]
          Length = 463

 Score =  205 bits (521), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 53/395 (13%), Positives = 118/395 (29%), Gaps = 33/395 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P Y++D++ L           K       ++L A K +    +   +     G    S
Sbjct: 60  GSPLYILDEETLRTACRQYHDTFKQHYKDESQVLYASKAWNCLAVCAIVASEGLGIDVVS 119

Query: 60  LYEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
             E+          +    +     +D  + A+ S C  +  N        +   +    
Sbjct: 120 GGELYTALNAGVTPDKIYLHGNNKSRDELVLAIESGCTIVADNWYELKTLVELVTKSSPV 179

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCEN 169
           +I LR+ P +              S+ G    D  E           N  GL  H   + 
Sbjct: 180 RIMLRLTPGIECHTHEYIRTGHLDSKFGFDPSDLDEVFAFVSKQPSLNCVGLHAHIGSQI 239

Query: 170 KSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRL-KEFSEKY 225
                   +   + +       +  +++ +++GGG+     +       +   K   E  
Sbjct: 240 FERQPHRDLAAVMVQWLRDAAKYNLELKELNVGGGLGIKYTESDDPPSIEEWSKAICEVV 299

Query: 226 SVQIY----------LEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDYL 273
                           EPG +++        ++    +  +++  V +D  +  +     
Sbjct: 300 QQACAAENLPLPKLLCEPGRSLIATACVTAYSIGSAKVIPDLRTYVTIDGGMSDNPRPIT 359

Query: 274 LYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
                 ++  N        T  + G+ C +GDI  +       + GD +       YN +
Sbjct: 360 YQSVYRSVVANKMSAALTETVTLAGKHCESGDILIKNAQLPKTEPGDILVVMGTGAYNYS 419

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             + +N +  P   +         ++  +Y D   
Sbjct: 420 MASNYNRLPRPAAVLVANGEANLILQRENYQDIIR 454


>gi|169334033|ref|ZP_02861226.1| hypothetical protein ANASTE_00426 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258750|gb|EDS72716.1| hypothetical protein ANASTE_00426 [Anaerofustis stercorihominis DSM
           17244]
          Length = 424

 Score =  205 bits (521), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 60/397 (15%), Positives = 125/397 (31%), Gaps = 35/397 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+I + K++  +D      +  G    +  A K F    M   + Q      + S 
Sbjct: 20  GTPLYVISENKIIEAIDLIKKSFEEYGLDYDINYAGKAFTNIAMVKIIKQQGISLDTVSG 79

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+          +   ++ + K  +   +A+ +    I  ++  ++      A++L   
Sbjct: 80  GEIYTALKAGLDPKRICFHGSNKSAQEIREAIEAGVGVITIDSFYEIGLVGRIAKELETV 139

Query: 118 IGLR--INPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE 168
             +   ++P V           R  S+ G          +  I+ E  N+ G+  H   +
Sbjct: 140 QNVHFRVSPGVEAHTHEYIQTGRIDSKFGIPVNMAVRAARMIIDEEYLNLTGVHCHIGSD 199

Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK- 224
               K F   +  +  I         +IE ++LGGG              +       K 
Sbjct: 200 ISSPKPFEIAATTMLEIVYNIKEMGVEIEALNLGGGFGINYLHDDPVFDVEEYVHTISKI 259

Query: 225 ----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDY 272
                        +I +EPG  I+        ++  I E       +     +  +    
Sbjct: 260 IRKQCDILGIKIPKIIVEPGRYIIGPAGITLYSIGTIKEIPYLRKYISVDGGMADNPRPA 319

Query: 273 LLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
           L       +              V G+ C   D+  +         GD ++  +   YN 
Sbjct: 320 LYGAIYHAVIANKYNKEANELYTVSGKCCET-DMLIKDILLPQAAPGDILAVLNTGAYNY 378

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           +  + +N +  P + +   D     +++ +Y +   N
Sbjct: 379 SMASHYNRLQSPPVVLLKDDKAELMVKKDTYENLIQN 415


>gi|145300547|ref|YP_001143388.1| diaminopimelate decarboxylase [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142853319|gb|ABO91640.1| diaminopimelate decarboxylase [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 416

 Score =  205 bits (521), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 55/385 (14%), Positives = 109/385 (28%), Gaps = 24/385 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  +   + + L +   G    S  E
Sbjct: 27  GTPLYVYSRATLERHWHAFDQAAGDIPHLICYAVKANSNLALLNLLARLGSGFDIVSGGE 86

Query: 63  V--MLGHEKFGGETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +  +L       +     VA  + E+  A+          + ++L +    A  + KK  
Sbjct: 87  LSRVLAAGGDPAKVVFSGVAKSEAEMRLALDKEILCFNLESEAELERLNRVAGSMGKKAR 146

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170
             +R+NP +              ++ G   +                + G+  H   +  
Sbjct: 147 VSVRVNPDIDAGTHPYISTGLKQNKFGIPIEQAPAIYRKAAAMANIEIKGVDCHIGSQLT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
               F         +          I  + +GGG+              + + LK+    
Sbjct: 207 ELNPFMEAADKLLRLIDTLAAEGIHIHHLDVGGGLGVNYGAEQPPHPTEYAEALKQKLAG 266

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATI-- 281
             + +  EPG AIV N   L T V  +          +D+ +   +   L       I  
Sbjct: 267 RDLTLLFEPGRAIVANAGVLLTRVEYLKPGETRNFALIDAGMNDLLRPSLYGAWMNIIEV 326

Query: 282 --YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       V G  C  GD  G+      +  G  ++      Y     + +N    
Sbjct: 327 DSRTAHEKALYDVVGPVCETGDFLGKERTLA-IAEGSLLAVRSAGAYGFTMSSNYNTRPR 385

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
               + +   +          D + 
Sbjct: 386 AAEVLVDGTQSFLIREREQLADLWR 410


>gi|255671797|gb|ACU26531.1| diaminopimelate decarboxylase [Glycine max]
          Length = 488

 Score =  205 bits (521), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 63/387 (16%), Positives = 129/387 (33%), Gaps = 27/387 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+YL  K ++  N++      +     +  A+K      + + L     G    S  E+ 
Sbjct: 97  PFYLYSKPQITRNVEAYKDALEGLNSIIGYAIKANNDLKILEHLRHLGCGAVLVSGNELK 156

Query: 65  LG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGL 120
           L     F      +N       ++         +  ++   L    + A++      + L
Sbjct: 157 LALRAGFDPTRCIFNGNGKILEDLVLAAQEGVFVNIDSEFDLENIVEAAKRAGKKVNVLL 216

Query: 121 RINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVN--GLMFHNNCENKSF 172
           RINP V              S+ G +        D ++     +   G   H        
Sbjct: 217 RINPDVDPQVHPYVATGNKNSKFGIRNEKLQCFLDAVKEHPNELKLVGAHCHLGSTITKV 276

Query: 173 LCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSEK 224
             F     ++ N   +      +++++++GGG+              +D    +++    
Sbjct: 277 DIFRDAATIMINYIDQIRDQGFEVDYLNIGGGLGIDYYHSGAILPTPRDLIDTVRDLVIS 336

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + + +EPG +++ NT  L   V  +  N  KN +++D S+   +   L          
Sbjct: 337 RGLNLIIEPGRSLIANTCCLVNRVTGVKTNGSKNFIVIDGSMAELIRPSLYDAYQHIELV 396

Query: 284 NTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
           +  P      T  V G  C + D  G+         G  +   D   Y ++  + +N   
Sbjct: 397 SPAPSNAETETFDVVGPVCESADFLGKGRELPTPAKGTGLVVHDAGAYCMSIASTYNLKM 456

Query: 339 MPTIAVKNVDGTIKAIRE-FSYNDYYN 364
            P       DG++  IR   ++ D+  
Sbjct: 457 RPPEYWVEDDGSVSKIRHGETFEDHIR 483


>gi|167898681|ref|ZP_02486082.1| iron-sulfur cluster-binding protein, rieske family/putative
           carboxynorspermidine decarboxylase [Burkholderia
           pseudomallei 7894]
          Length = 422

 Score =  205 bits (521), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 12/373 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP ++ D++ L + L +   +  ++G +LL  LK F+  G  + +  ++DG  +SS +
Sbjct: 42  LDTPAFVYDERTLRDALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 101

Query: 62  EVMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E           G  H    A +D ++  ++ NCD +  N++SQ  +  D A       G
Sbjct: 102 EAAFSRMLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 160

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173
           LRINP  S       DP RP S+LG                +  + G+ FH NC++  F 
Sbjct: 161 LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 220

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
             +  ++++EK     +  + WI+LGGG       Y  +      K   E + V +++EP
Sbjct: 221 RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 279

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291
           G AIV    T+  +V+D+ ++    + V  +   H P+   YQ    +  +     +  +
Sbjct: 280 GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 339

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
           + G SCLAGD+FG + F+ P+++G R++F +   Y + + + FNGIN+P++  +  DG +
Sbjct: 340 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 399

Query: 352 KAIREFSYNDYYN 364
            A++ FSY D+  
Sbjct: 400 AAVQRFSYEDFLR 412


>gi|119512926|ref|ZP_01631989.1| diaminopimelate decarboxylase [Nodularia spumigena CCY9414]
 gi|119462422|gb|EAW43396.1| diaminopimelate decarboxylase [Nodularia spumigena CCY9414]
          Length = 473

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 58/398 (14%), Positives = 115/398 (28%), Gaps = 36/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P Y++D++ L           K       ++L A K +    +         G    S
Sbjct: 61  GSPLYILDEETLRLACQQYRDTFKQYYQGESQVLYASKAWNCLAICAIAASEGLGIDVVS 120

Query: 60  LYEVMLGH-EKFGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             E+          +    +       E+   + +  TI+ +   +L    + A+     
Sbjct: 121 GGELYTALNAGVTPDKLYLHGNNKSREELVLAIESGSTIVADNWQELRILVEMAEAAPGT 180

Query: 118 IGLRIN----PSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNN 166
             +RI     P +              S+ G    D  E           N  GL  H  
Sbjct: 181 SAIRIMLRLTPGIECHTHEYIRTGHLDSKFGFDPNDLDEVFTFVSKQPSLNCVGLHAHIG 240

Query: 167 CENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTD-KDYPVKDFCQRLKEFS 222
            +         +   + +       +   +  +++GGG+     +        + +K   
Sbjct: 241 SQIFERQPHRDLAAVMVQWLQKAANYGLNVTELNVGGGLGIRYTESDDPPSIEEWVKAIC 300

Query: 223 EKYSVQI----------YLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVP 270
           E                  EPG +++        T+    +  +I+  V VD  +  +  
Sbjct: 301 EVVQSACTAANLPLPKLLCEPGRSLIATACITAYTMGSSKVVPDIRTYVTVDGGMSDNPR 360

Query: 271 DYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
                     +  N        T  + G+ C +GDI  +       + GD +       Y
Sbjct: 361 PITYQSVYRAVVANKVSAPLTQTVTIAGKHCESGDILIKNAQLPKTEPGDILVIMGTGAY 420

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           N +  + +N +  P   V         +R  SY D   
Sbjct: 421 NYSMASNYNRLPRPAAVVVANGEANLILRRESYQDLIR 458


>gi|255324500|ref|ZP_05365617.1| diaminopimelate decarboxylase [Corynebacterium tuberculostearicum
           SK141]
 gi|255298406|gb|EET77706.1| diaminopimelate decarboxylase [Corynebacterium tuberculostearicum
           SK141]
          Length = 445

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 64/404 (15%), Positives = 136/404 (33%), Gaps = 43/404 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP Y+ D+    +               +  A K F +  + + +N+      ++SL E
Sbjct: 39  QTPLYVFDEDDFRSRCQDMARAFGGPEH-VHYASKAFISKKIVNWVNEEGLCLDAASLNE 97

Query: 63  VMLGHEK-FGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F  E    +   KD E   +        ++ +   +L +    A +    + 
Sbjct: 98  LKIALAAEFPAERITTHGNNKDEEYLRLCVDAGVGHVVIDNELELEELNRIAGEAGKVQP 157

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + +R+ P V               + G            K  +E++  +++GL  H   +
Sbjct: 158 VMIRVKPGVDAHTHEFIATAHEDQKFGISLATGAAFAAAKRCLEADNLHLSGLHCHVGSQ 217

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ-------- 216
             +   F      ++    + +      +E + LGGG       Y      +        
Sbjct: 218 VFNAEGFKLAAERVMGLYRQIYTELGVTLEELDLGGGFGIPYMPYEEALDIERVAGDMLG 277

Query: 217 RLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISE--------NIKNLVIVDSSV 265
            +K  +E+    +  + +EPG ++V  +      V  + +         ++  + VD  +
Sbjct: 278 AVKHTAEELGIEAPFLLVEPGRSLVAGSAVTVYRVGTVKDVETGKSDLPLRRYISVDGGM 337

Query: 266 EAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISF 320
             ++   L            + +     + V G  C +GDI  E       ++ GD I+F
Sbjct: 338 SDNIRPALYGSAYDVRVVNRFSDGEEVPSRVVGFHCESGDILLEDGELPNDIQPGDLIAF 397

Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
               GY     + +NG   P +    V  T   +R  +  D  +
Sbjct: 398 AATGGYQYMMSSRYNGAVRPAVVATRVGQTKPMLRRETIEDLLS 441


>gi|269798093|ref|YP_003311993.1| Orn/DAP/Arg decarboxylase 2 [Veillonella parvula DSM 2008]
 gi|269094722|gb|ACZ24713.1| Orn/DAP/Arg decarboxylase 2 [Veillonella parvula DSM 2008]
          Length = 418

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 63/393 (16%), Positives = 123/393 (31%), Gaps = 29/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+++ D++ ++ N+ + +     N G K   A+K      +   L +   G   SSL 
Sbjct: 21  PTPFHIYDEEGIIENMKSFINAFSWNKGFKQYFAVKATPNPYIMRLLQKLGVGADCSSLA 80

Query: 62  EVMLG-HEKFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E++L       G    +        E    L     I  + ++ +   +     L     
Sbjct: 81  ELILCEKVGITGHDIMFTSNDTPYVEYKKALEMGAIINLDDITHIEYLEKNHGSLPDTFC 140

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVNGLMFHNNCENKSFLC- 174
           +R NP                ++ G   +   E+  +     V     H    +      
Sbjct: 141 VRYNPGSLKEGGNTIIGLPEEAKYGMTREQIFEAYKQLQAKGVKHFGIHTMVVSNELDID 200

Query: 175 -----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
                                  +E+I LGGG+    K        + L +  E+   +I
Sbjct: 201 GLVGTAELCFNLAVDIKKELGITVEFIDLGGGVGVAYKPEQTPVDFRALSKGVEEAYNRI 260

Query: 230 Y-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                        E G  +  +   L +T +   +  ++ + +D+ +   +   L     
Sbjct: 261 LVANGLIDVALAYECGRMVTGSFGYLVSTAIHKKDIYRHYIGLDACMANLMRPALYGSYH 320

Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        + IGDR+   D   +  +    +
Sbjct: 321 HITVMGKENAPKDHVYDVTGSLCENNDKFAIQRELPKIDIGDRVIIHDAGAHGHSMGFNY 380

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       + + DG++  IR   +Y+D +  L
Sbjct: 381 NGKLRSAELLLHKDGSVTQIRRAETYDDLFGTL 413


>gi|319946455|ref|ZP_08020692.1| diaminopimelate decarboxylase [Streptococcus australis ATCC 700641]
 gi|319747423|gb|EFV99679.1| diaminopimelate decarboxylase [Streptococcus australis ATCC 700641]
          Length = 449

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 57/392 (14%), Positives = 115/392 (29%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D+  +             N G K   A+K      +   L +   G   +S  
Sbjct: 52  PTPFHLYDEAGIRQTARALHQAFSWNPGFKEYFAIKATPNPAILKILKEEGCGVDCASYV 111

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++  +  F G+   ++      E          TI  +    +   +  A        
Sbjct: 112 ELLMAQKLGFTGQEIMFSSNNTPAEEMFFARQLGATINLDAYEDVAFLQSVATLPEVISC 171

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES----EIKNVNGLMFH------NNCEN 169
                 V      + D     ++ G   +  I++    +I  V     H          +
Sbjct: 172 RYNPGGVFELGTDIMDHP-EEAKFGMTKEQLIQAFIELKILGVKRFGIHALLASNTVSND 230

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
                   + +   +        +++++L GG+    K     +    + E   +    I
Sbjct: 231 YYPELAKQLFQLAVEVVEKTGVTLDFVNLSGGVGVNYKPEDQPNDIAVIGEGVRRAYEDI 290

Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                      Y E G  ++ +   L T V    +  +  + VD+S    +   +     
Sbjct: 291 LVPAGLDQVKIYTELGRFMLASHGLLVTHVTHKKQTYRTYLGVDASAVNLLRPAMYGAYH 350

Query: 279 ATI---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                  P+       + G  C   D F +       +IGD +   D   +  +    +N
Sbjct: 351 HITNLDRPDGETEVVDIVGSLCENNDKFAKNREFPVSEIGDLLVIHDTGAHGYSMGYQYN 410

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                   +    G  + IR      DY+  L
Sbjct: 411 AKLRSAEILLEESGQTRLIRRAEKPEDYFATL 442


>gi|292669999|ref|ZP_06603425.1| diaminopimelate decarboxylase [Selenomonas noxia ATCC 43541]
 gi|292648365|gb|EFF66337.1| diaminopimelate decarboxylase [Selenomonas noxia ATCC 43541]
          Length = 419

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 64/393 (16%), Positives = 116/393 (29%), Gaps = 31/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+++ D+ K+  N            G +   A+K      +   L++   GT  SS+ 
Sbjct: 21  PTPFHIYDEAKIRANFRRLREAFSWAPGFREHFAVKALPNPRIVQILHEEGAGTDCSSIA 80

Query: 62  EVML-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           E+++       GE         D   +             +  L+     A+       L
Sbjct: 81  ELLISAAAGVKGEEIMLTSN--DTPWEEFQKAIALGAVINLDDLSHLDYMAEHAGLPEVL 138

Query: 121 RINPSVSYSKFILADPNRP-FSRLGEKCKDK----IESEIKNVNGLMFHNNCENKSFLCF 175
               +            +P  ++ G            ++   V     H    +      
Sbjct: 139 SFRYNPGDLIEGNDIIGKPVEAKYGLTRPQMFEGYRRAQEMGVKRFGLHTMVISSELRTE 198

Query: 176 ------SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
                   M +   +   +    +E+++LGGG     +          +    E+    I
Sbjct: 199 AFLLTARIMFELAAELKKNLGICVEFVNLGGGFGIPYRPEENPIDYAAVGAGIERLYNDI 258

Query: 230 Y-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                        E G AI  +   L +TVL   +  K  + +DS +   +   L     
Sbjct: 259 MRPAGLGSTAIRTESGRAITGDAGWLVSTVLHEKDTYKKYIGLDSCMANLMRPALYGAYH 318

Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        + IGD +   D   +       +
Sbjct: 319 HITVLGKENAPADHIYDVTGSLCENNDKFAIDRALPKIDIGDIVVIHDTGAHGSAMGFNY 378

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       +   DGTI+ IR   + +DY+  L
Sbjct: 379 NGKLWCAELLLRTDGTIELIRRAQTLDDYFATL 411


>gi|330839873|ref|YP_004414453.1| Diaminopimelate decarboxylase [Selenomonas sputigena ATCC 35185]
 gi|329747637|gb|AEC00994.1| Diaminopimelate decarboxylase [Selenomonas sputigena ATCC 35185]
          Length = 422

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 61/393 (15%), Positives = 113/393 (28%), Gaps = 31/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+++ D++ +  N                  A+K      +   L++   GT  SS+ 
Sbjct: 21  PTPFHIYDEKAIRENFRRFKRAFSWAPNFTEHFAVKAAPNPRLLQILHEEGAGTDCSSIA 80

Query: 62  EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E++L       GE            E          I  + +S ++  +  A        
Sbjct: 81  ELLLSEAAGIKGEEIMLTSNDTPAEEFQKARELGAIINLDDISHIDYLEKCAGFPD--CL 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFHNNCENKSFLCF 175
                     +          ++ G       ++      K V     H    +      
Sbjct: 139 SFRYNPGPLIEGNDIIGKPTEAKYGLTHHQIFDAYKIAREKGVKRFGLHTMVISSELRNE 198

Query: 176 SA------MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
           +       M     +        +E+++LGGG     +        +R+    E    +I
Sbjct: 199 AFLFTAELMFNLAVEIKKRLGISLEFVNLGGGFGIPYRPEEEAIDVERVGSGIEALYKKI 258

Query: 230 Y-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                        E G  I      L TT L   +  K+ + +D+ +   +   L     
Sbjct: 259 IEPAGLAGLAIKAESGRYITGPYGWLVTTALHEKKTYKDYIGLDACMANLMRPALYGAYH 318

Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   + G  C   D F        + IGDRI   D   +       +
Sbjct: 319 HITVVGKEDAFCDHIYDITGSLCENNDKFAIDRKLPKIDIGDRIVIHDTGAHGHAMGFNY 378

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       +   DG+++ IR   +  DY+  L
Sbjct: 379 NGKLRSAELLLREDGSVELIRRAETLGDYFATL 411


>gi|331017932|gb|EGH97988.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 412

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 57/399 (14%), Positives = 113/399 (28%), Gaps = 45/399 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D Q +   +             +  A K  +   +   L        + SL E
Sbjct: 17  GTPLWVYDGQLIKKRVQQLA-AFD----TVRFAQKACSNLHILRLLRDAGAAVDAVSLGE 71

Query: 63  VMLGH-EKFGGE-------THAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114
           +       F  +              +    +  V+     +   ++  L++    A   
Sbjct: 72  LERALHAGFSAQNAQGTAGVVFTADVFDRATLQRVVEAQVEVNVGSIDMLHQLG--ALSP 129

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCE 168
             ++ LRINP   +      +     S+ G            +     ++ GL  H    
Sbjct: 130 GHRVWLRINPGFGHGHSRKTNTGGENSKHGIWHTHLQDALTLVHYYRLHLVGLHMHIGSG 189

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----------KDYPVKDFCQRL 218
              +     +   + +        IE IS GGG+                +   D  ++ 
Sbjct: 190 VD-YQHLQQVCSTMAELVVEMDHDIEAISAGGGLSVPYRAGELPINTSHYFAQWDHARKR 248

Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQE 277
            E    + +++ +EPG  +V     L + V             VD+     +   L    
Sbjct: 249 IEAHLGHPIRLEIEPGRFLVAQAGVLVSEVRATKHMGGKHFTLVDAGFNDLMRPSLYGSY 308

Query: 278 SATIYPNTGPYT-----AMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAG 325
                  +          +V G  C +GD+F        E       ++GD + F D   
Sbjct: 309 HEMSLITSRDEPLPMQETVVAGPLCESGDVFTQAEGGIVESRLLPVAQVGDYLVFHDAGA 368

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  + +N        + +        R    +D   
Sbjct: 369 YGASMSSNYNSRTHAAEVLVDDGQERLIRRRQPLDDLLR 407


>gi|269140254|ref|YP_003296955.1| diaminopimelate decarboxylase [Edwardsiella tarda EIB202]
 gi|267985915|gb|ACY85744.1| diaminopimelate decarboxylase [Edwardsiella tarda EIB202]
 gi|304560084|gb|ADM42748.1| Diaminopimelate decarboxylase [Edwardsiella tarda FL6-60]
          Length = 428

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 53/399 (13%), Positives = 115/399 (28%), Gaps = 45/399 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   +   + +           +  A K  +   +   + Q      + SL E
Sbjct: 34  GTPLWVYDAALIERQIASLR-AFD----TIRFAQKACSNLHILRLMRQAGVKVDAVSLGE 88

Query: 63  VMLG-----HEKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
           +              E   +     D      +      +   +   L +   +A     
Sbjct: 89  IERALVAGFRPGGDDEEIVFTADVIDEATLDRICALGITVNAGSCDMLRQLGRRA--SGH 146

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENK 170
            + LRINP   +      +     S+ G   +D  ++          + GL  H      
Sbjct: 147 PVWLRINPGFGHGHSQKTNTGGENSKHGIWHQDLAQALALIDTYGLRLVGLHMHIGSGVD 206

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE------- 223
            +   + +   +  +       I+ IS GGG+    +D       +      +       
Sbjct: 207 -YDHLARVCDTLANQAIALGRDIQAISAGGGLSIPYRDGDAAVDVRHYYGLWDAARRRIA 265

Query: 224 ---KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA 279
               + V++ +EPG  +V     L   V  +     ++ V+ D+     +   +      
Sbjct: 266 AHLGHPVRLEIEPGRYLVAQAGVLLAQVRAVKSMGQRHFVLADAGFNDLMRPAMYGSHHH 325

Query: 280 TIYPNTGPYTA-------MVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVAG 325
                             +V G  C +GD+F +              ++GD + F D   
Sbjct: 326 ISLLPQDGRDVATPCIETVVGGPLCESGDVFTQREGGKVTSCALPAAQVGDWLVFHDTGA 385

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  + +N   +    +   +      R    ++   
Sbjct: 386 YGASMSSNYNSRPLLPEVLVEGNKARLIRRRQRMDELLA 424


>gi|310657748|ref|YP_003935469.1| diaminopimelate decarboxylase [Clostridium sticklandii DSM 519]
 gi|308824526|emb|CBH20564.1| diaminopimelate decarboxylase [Clostridium sticklandii]
          Length = 421

 Score =  204 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 67/398 (16%), Positives = 130/398 (32%), Gaps = 36/398 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           TP Y++ +  +   +D        K        A K F    M   + +   G    S  
Sbjct: 21  TPLYVMSQDIIEEKIDYIKVNFLDKYPRTYAYYASKAFLTKAMAKIIKKSEMGIDVVSYG 80

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA-QKLHKK 117
           E+          +   ++   K  +            I+ + +S+L    + A ++   K
Sbjct: 81  ELYTALDAGINPDKIMFHGNNKSKDELEFALERGIGRIVVDGISELKLLIELAGERFTAK 140

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
           I LRI+P+V           +  S+ G         E  +  I+SE  +  G  FH   +
Sbjct: 141 ILLRISPNVEAHTHKYISTGQLDSKFGLSFASKDLDEAIELAIKSEHIDFKGFHFHVGSQ 200

Query: 169 NK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                         ++ I++    +  +IE +++GGG              +   +   +
Sbjct: 201 LFDNEAHVESTKKAMELIKEIKDKYDYEIEDLNVGGGFGVRYTAEDEPMPLEYFTDAIME 260

Query: 225 Y-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271
                          I++EPG  IV        TV  +      +  + +D  +  +   
Sbjct: 261 EVIALIDKYEIIRPNIFIEPGRYIVAEAGITLYTVGSVKNIESVRKYICIDGGMADNPRP 320

Query: 272 YLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
            L   +     A    +       V G+ C +GDI         V+ GD ++      YN
Sbjct: 321 ALYQAKYSACIANKMYDEDTELVTVAGKCCESGDILIWDINLPKVERGDILAVMGTGAYN 380

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            +  + +N +  P + + +       ++  SY D   N
Sbjct: 381 YSMSSNYNKLAKPAVVMIHDKEDRLIVQRESYEDLLKN 418


>gi|238921148|ref|YP_002934663.1| diaminopimelate decarboxylase [Edwardsiella ictaluri 93-146]
 gi|238870717|gb|ACR70428.1| diaminopimelate decarboxylase, putative [Edwardsiella ictaluri
           93-146]
          Length = 419

 Score =  204 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 56/399 (14%), Positives = 117/399 (29%), Gaps = 45/399 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   +   + +           +  A K  +   +   + Q      + SL E
Sbjct: 25  GTPLWVYDAALIERQIASLRTFD-----TIRFAQKACSNLHILRLMRQAGVKVDAVSLGE 79

Query: 63  VMLGH-EKFGG----ETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
           +       F      E   +     D      +      +   +   L +   +A     
Sbjct: 80  IERALMAGFRPDADDEEIVFTADVIDEATLDRICALGITVNAGSCDMLRQLGCRASGHP- 138

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENK 170
            + LRINP   +      +     S+ G   +D  ++          + GL  H      
Sbjct: 139 -VWLRINPGFGHGHSQKTNTGGENSKHGIWYQDLAQALALIDTYGLRLVGLHMHIGSGVD 197

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE------- 223
            +   + +   +  +       I+ IS GGG+    +D       +      +       
Sbjct: 198 -YDHLARVCDTLANQAIALGRDIQAISAGGGLSIPYRDGDASVDVRHYYGLWDAARRRIA 256

Query: 224 ---KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA 279
               + V++ +EPG  +V  +  L   V  +     ++ V+ D+     +   +      
Sbjct: 257 EHLGHPVRLEIEPGRYLVAQSGVLLAQVRAVKSMGARHFVLADAGFNDLMRPAMYGSHHH 316

Query: 280 TIYPNTGPYTAM-------VCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVAG 325
                              V G  C +GD+F +             V++GD + F D   
Sbjct: 317 ISLLPQDGRDVTTPCIETVVGGPLCESGDVFTQREGGRVTSCALPAVQVGDWLVFHDTGA 376

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  + +N   +    +   D      R    ++   
Sbjct: 377 YGASMSSNYNSRPLLPEVLVEGDSVRLIRRRQRMDELLA 415


>gi|298246004|ref|ZP_06969810.1| Orn/DAP/Arg decarboxylase 2 [Ktedonobacter racemifer DSM 44963]
 gi|297553485|gb|EFH87350.1| Orn/DAP/Arg decarboxylase 2 [Ktedonobacter racemifer DSM 44963]
          Length = 416

 Score =  204 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 58/393 (14%), Positives = 108/393 (27%), Gaps = 31/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D+Q +   +         +       A+K      +   L +   G   SSL 
Sbjct: 21  PTPFHLYDEQGIRAAVRRMKRAFAWSESFTNYFAVKALPNPHILRILKEEGLGVDCSSLP 80

Query: 62  EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E++L     F GE   +        E          I  + +S +   +++A      + 
Sbjct: 81  ELVLAERVGFAGEEIMFTSNQTPASEYRKARELGAIINLDDISHIAYLEEQAGLPD--LL 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE----IKNVNGLMFHNNCENK----- 170
                            +   ++ G       ++      K V     H    +      
Sbjct: 139 SFRYNPGPLRAGNAIIGDPKEAKYGLTYDQLFQAYASAKEKGVRRFGLHAMLASNELNVA 198

Query: 171 -SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
                   +   +            +I++GGGI    +        +   +  +    Q 
Sbjct: 199 YFLETARMLFDLVAALSREVGITFSFINMGGGIGIPYRPEQSAFDMETFGQELQALYTQK 258

Query: 230 Y-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                       +E G  I      L TT +   E  K  + +D+ +   +   L     
Sbjct: 259 IVANSLPPLRIVMECGRVITGPHGYLVTTAIHQKETYKRYIGLDACMTNLMRPALYGAYH 318

Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                            V G  C   D F        +  GD +   D   +       +
Sbjct: 319 HITVLGKEDQPANEMYDVVGSLCENFDKFAIDRSLPEITPGDILIIHDTGAHGHAMGFNY 378

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       +    G I+ IR   + +DY+  L
Sbjct: 379 NGKLRSAELLLREGGDIQLIRRAETLDDYFCTL 411


>gi|150402373|ref|YP_001329667.1| diaminopimelate decarboxylase [Methanococcus maripaludis C7]
 gi|150033403|gb|ABR65516.1| diaminopimelate decarboxylase [Methanococcus maripaludis C7]
          Length = 436

 Score =  204 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 64/398 (16%), Positives = 134/398 (33%), Gaps = 35/398 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK------LLLALKCFAAWGMFDTLNQYMDGTT 56
            TP Y++ + + + N    +   K    K      +  A K      +   L++   G  
Sbjct: 31  GTPLYVMSETQTVKNFTRYVDSFKEYSEKTGKEFIISFAYKANTNLAVTKLLSKLGCGAD 90

Query: 57  SSSLYEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQK 113
             S  E+ +        E   +N   K  E   +    +      +++S+L    + A++
Sbjct: 91  IVSAGELYIAKLSNVPSEKIVFNGNCKLKEEIKMGIEAEIRAFNVDSISELVLINETAKE 150

Query: 114 LHK--KIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLM 162
           + K   +  R+NP+V              ++ G         E  K   + E   + G+ 
Sbjct: 151 MGKIANVAFRVNPNVDAKTHPKISTGMKKNKFGLDIESGIALETIKMAEKMENVKIVGIH 210

Query: 163 FHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ--- 216
            H   +      F+  +  + +      +   +I+ ++LGGG+             +   
Sbjct: 211 CHIGSQLTYISPFVEEARKIMDFVVSLKNEGIEIKDVNLGGGLGIPYDKNTKIPVQKDLS 270

Query: 217 ------RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK-NLVIVDSSVEAHV 269
                   +   +     + LEPG ++V     L  TV  + E      +++D+ +   +
Sbjct: 271 KAVLDVIYEYEGKIELPNLILEPGRSLVATAGVLLGTVEHVKETPVAKWIMIDAGMNDMM 330

Query: 270 PDYLL--YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
              +   Y E              V G  C + D+FG+      +++ D ++  DV  Y 
Sbjct: 331 RPAIYEAYHEIVPCTIRDEKEVVSVAGGLCESSDVFGKDRELSKMEVKDTVAILDVGAYG 390

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           I+  N +N    P + + N           +  D  + 
Sbjct: 391 ISMANNYNSRGKPAMILTNEKEVSLIRVRETLADLISK 428


>gi|229490040|ref|ZP_04383893.1| diaminopimelate decarboxylase [Rhodococcus erythropolis SK121]
 gi|229323141|gb|EEN88909.1| diaminopimelate decarboxylase [Rhodococcus erythropolis SK121]
          Length = 473

 Score =  204 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 57/406 (14%), Positives = 116/406 (28%), Gaps = 45/406 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ID+    +              K+  A K F    +   +          S  E
Sbjct: 64  GTPLFVIDEDDFRSRCRDMARAF-GPDAKVHYASKAFLCGEIARWVADEGLSLDVCSGGE 122

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F  E  A +   K     A         ++ ++  ++++    A +    + 
Sbjct: 123 LAIALHADFPAERIAMHGNNKSVAELAAGVAAGVGHVVLDSSIEIDRLDRVAGEAGVVQD 182

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G         +  +    ++   + GL  H   +
Sbjct: 183 VLIRLTVGVEAHTHEFISTAHEDQKFGFSLAGGAAIDAVRRVFAADNLRLVGLHSHIGSQ 242

Query: 169 NKSFLCFSAMLKNIEKEFGHFI--------TQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F      +       +         QI  I LGGG+  +            L  
Sbjct: 243 IFDVDGFEVAAHRVIGLLRDVVTEFGVEKTKQISIIDLGGGMGISYIPSDDPPPVDELAA 302

Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENI------KNLVIVDS 263
                              + +EPG AI    T     V  I +        +  + VD 
Sbjct: 303 KLGHIVRNESALAGLPEPTLAVEPGRAIAGPGTVTLYEVGTIKDVTVGSSLTRRYISVDG 362

Query: 264 SVEAHVPDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318
            +  ++   L   E      +      P  A + G+ C +GD+     +    V  GD +
Sbjct: 363 GMSDNIRTSLYGAEYEAKLVSRTSEADPVVARIVGKHCESGDVVIRDTWMPEDVGPGDLL 422

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +      Y  +  + +N +  P +       +   +R  +  D  +
Sbjct: 423 AVAATGAYCYSMSSRYNLLTRPAVVAVRDGVSRVILRRETVEDLLS 468


>gi|170737760|ref|YP_001779020.1| diaminopimelate decarboxylase [Burkholderia cenocepacia MC0-3]
 gi|169819948|gb|ACA94530.1| diaminopimelate decarboxylase [Burkholderia cenocepacia MC0-3]
          Length = 412

 Score =  204 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 58/400 (14%), Positives = 119/400 (29%), Gaps = 46/400 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   + + +             +  A K  +   +   +        + SL E
Sbjct: 16  GTPLWVYDADVIRDRIAQLRQFDV-----IRYAQKANSNVHILKLMRDEGACVDAVSLGE 70

Query: 63  VMLGHEKF-----GGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHK 116
           +              E   +     D    A +  +  T+   ++  L +  + A     
Sbjct: 71  IERSLAAGFSPAGEPEGVVFTADLIDRPTLAAVLKHGVTVNAGSLDMLARIGEHA--PGH 128

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170
           ++ LR+NP   +      +   P S+ G    D       +      + G+  H      
Sbjct: 129 RVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVRQYGLKLVGIHMHIGSGVD 188

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEF 221
            +   S +   +          I+ IS GGG+               Y  +    R +  
Sbjct: 189 -YGHLSQVCDAMVDLVTSLGHDIDAISAGGGLSIPYRDGELRVDVGHYFSQWDAARKRIE 247

Query: 222 SE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279
               + V+I +EPG  +V    TL T V  ++   K+  + +D+     +   +     A
Sbjct: 248 RHLGHPVRIEIEPGRFLVAEAGTLVTEVQAVNRRPKHDFVLIDAGFNDLMRPSMYGSYHA 307

Query: 280 TIYPNTGP--------YTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324
                               + G  C +GD+F +              +IGD +   D  
Sbjct: 308 VSVHAHDGGLPADRPLVDLAIAGPLCESGDVFTQDAGGVVTHRKLAQPQIGDLLFLHDAG 367

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            Y  +  + +N   +    + +        R  +  +   
Sbjct: 368 AYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIGELLA 407


>gi|167755248|ref|ZP_02427375.1| hypothetical protein CLORAM_00753 [Clostridium ramosum DSM 1402]
 gi|237734996|ref|ZP_04565477.1| diaminopimelate decarboxylase [Mollicutes bacterium D7]
 gi|167705298|gb|EDS19877.1| hypothetical protein CLORAM_00753 [Clostridium ramosum DSM 1402]
 gi|229381772|gb|EEO31863.1| diaminopimelate decarboxylase [Coprobacillus sp. D7]
          Length = 435

 Score =  204 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 58/398 (14%), Positives = 132/398 (33%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++ +  + +  +        K      L A K F+   ++    +Y  G    S 
Sbjct: 30  GTPLYVMSEGHIRHQFNKLKTKMIEKYENTLPLFASKSFSCIAIYKIAKEYGVGIDCVSA 89

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+ +  +  F  +   ++   K          +  +  + +   +++  ++ A +L  K
Sbjct: 90  GEISVALKSGFDPKKIYFHGNNKLPSEIEYALENGVENFVIDNFYEIDLVQEIASRLGVK 149

Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNN 166
           I   +RI P V              ++ G            K  I++   N +G+  H  
Sbjct: 150 INGIVRITPGVYAGGHDYIRVGAKDTKFGFSSHDNTYLKAIKKVIDAPNINFDGIHCHVG 209

Query: 167 CENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            + +    +    +  ++   + +  F   I  ++ GGG              + + +  
Sbjct: 210 SQIEDIQAYVLAMNKFVEIAYEIYDIFGIVINKLNAGGGFGIAYTAADNPLEFETVVDTI 269

Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVL------DISENIKNLVIVDSSV 265
            +               + +EPG   V N      TV       DI + I     +  ++
Sbjct: 270 MEIITKGFDARGLKRPMVLVEPGRYCVGNAGITLYTVGSSKYIKDIRDYITVDGGMTDNI 329

Query: 266 EAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
            + +         A        +   V G++C +GDI  +    +  + GD ++      
Sbjct: 330 RSSLYAAKYDAIIANKAEMPTDHLITVAGKNCESGDILIKDIMLQDPEPGDILAMFSTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
           Y+ +  + +N +  P +         + IR  +++D  
Sbjct: 390 YHYSMSSNYNQLPKPAVVFTYEGKDREVIRRQTFDDLV 427


>gi|237736701|ref|ZP_04567182.1| diaminopimelate decarboxylase [Fusobacterium mortiferum ATCC 9817]
 gi|229420563|gb|EEO35610.1| diaminopimelate decarboxylase [Fusobacterium mortiferum ATCC 9817]
          Length = 434

 Score =  204 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 66/400 (16%), Positives = 137/400 (34%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++D++ + +N+       K      +++ A K F A  M   + +Y     + S 
Sbjct: 29  GTPLYIMDQELIESNMRKYKENFKSDKFQTQIVYASKAFLAKAMCQLVEKYDMDIDAVSG 88

Query: 61  YEVMLGH-EKFGGET-HAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+          +  H +      +     V     +II +  +++        + +KK
Sbjct: 89  GELYTIKVSGLDMKRVHMHGNNKTLEELEMCVDYGIGSIIIDNETEIENLSYVCAQKNKK 148

Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
           I   LRIN  +          ++  S+ GE           +  ++ +     G   H  
Sbjct: 149 IKAMLRINIGIDAHTHEYIKTSKHSSKFGESIFDEKLVGIVEKIVKDKNIEFLGFHCHIG 208

Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP--------VKDF 214
            +             M+   +K       +I  I+LGGG      +          ++  
Sbjct: 209 SQIFDTKAFHEGIETMVVETKKIADTLGIKIPEINLGGGFGVYYTENDVEVDIEKFMRSM 268

Query: 215 CQRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
            + +++  +++     ++ +EPG +IV N  +   TV  I +       + +D  +  ++
Sbjct: 269 IEHIEKSLDEHKLEIEKVSIEPGRSIVGNAGSTLYTVGGIKQTYGGVKYMFIDGGMTDNI 328

Query: 270 PDYLLYQESATI----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   E   +              V G+ C +GD+  +       + GD +       
Sbjct: 329 RPALYQAEYEAVIANRLDEKEREVVTVAGKCCESGDLIIKGKSLPKGEKGDLLLVSTTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  + +N +  P +          AIR  S+ D   N
Sbjct: 389 YGYSMSSNYNKLARPAVVFVKNGKASLAIRRESFEDLIRN 428


>gi|73667159|ref|YP_303175.1| diaminopimelate decarboxylase [Ehrlichia canis str. Jake]
 gi|72394300|gb|AAZ68577.1| diaminopimelate decarboxylase [Ehrlichia canis str. Jake]
          Length = 421

 Score =  204 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 69/384 (17%), Positives = 128/384 (33%), Gaps = 22/384 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y      + NN         N    +  A+K  +   +   LN    G    S  
Sbjct: 30  IGTPVYCYSLNAIKNNYRQFQENLPN-NSIICYAVKSNSNLSILSLLNSLGAGADVVSEG 88

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116
           E+              ++   K  +  +   +         ++ +L+     A K +   
Sbjct: 89  EIRRAIAVGISPNKIVFSGVGKTEQEISFALDNRILQFNVESIEELSLINTIACKKNIIA 148

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-----VNGLMFHNNCEN-- 169
            + +RINP++S             ++ G   +   +    N     + G+  H   +   
Sbjct: 149 PVSIRINPNISADTNDKITTGLKVNKFGIPEELLDQIFNNNFIGIRIIGISVHIGSQISN 208

Query: 170 -KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP----VKDFCQRLKEFSEK 224
              F      +K I K F     QI  + LGGG+    K+      + ++   LK+  E 
Sbjct: 209 LNIFQNTIDKIKKIVKIFEQRNMQIIRVDLGGGLGIPYKNADVFPTIPEYANLLKKNFEN 268

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP 283
            + QI  EPG A++ NT  L T VL    N +   I+ D+ +   +   L   E   I  
Sbjct: 269 ENYQIICEPGRALIGNTGVLLTKVLYHKHNQEKSHIILDAGMNDLIRPALYNAEHTIIPA 328

Query: 284 NTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
            +         + G  C + D F   +    ++ G+ ++      Y  +  + +N   + 
Sbjct: 329 ISTSTPLQLYDIVGPICESDDTFAYNYHINNLQNGEIVAICTTGAYGSSMSSNYNSRPLV 388

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + +           +Y D   
Sbjct: 389 PEVMVSNSNYDIIRHRQTYEDMLK 412


>gi|226307410|ref|YP_002767370.1| diaminopimelate decarboxylase [Rhodococcus erythropolis PR4]
 gi|226186527|dbj|BAH34631.1| diaminopimelate decarboxylase [Rhodococcus erythropolis PR4]
          Length = 473

 Score =  204 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 57/406 (14%), Positives = 116/406 (28%), Gaps = 45/406 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ID+    +              K+  A K F    +   +          S  E
Sbjct: 64  GTPLFVIDEDDFRSRCRDMARAF-GPDAKVHYASKAFLCGEIARWVADEGLSLDVCSGGE 122

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F  E  A +   K     A         ++ ++  ++++    A +    + 
Sbjct: 123 LAIALHADFPAERIAMHGNNKSVAELAAGVAAGVGHVVLDSAIEIDRLDRVAGEAGVVQD 182

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G         +  +    ++   + GL  H   +
Sbjct: 183 VLIRLTVGVEAHTHEFISTAHEDQKFGFSLAGGAAIDAVRRVFAADNLRLVGLHSHIGSQ 242

Query: 169 NKSFLCFSAMLKNIEKEFGHFI--------TQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F      +       +         QI  I LGGG+  +            L  
Sbjct: 243 IFDVDGFEVAAHRVIGLLRDVVTEFGVEKTKQISIIDLGGGMGISYIPSDDPPPVDELAA 302

Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENI------KNLVIVDS 263
                              + +EPG AI    T     V  I +        +  + VD 
Sbjct: 303 KLGHIVRNESALAGLPEPTLAVEPGRAIAGPGTVTLYEVGTIKDVTVGSSLTRRYISVDG 362

Query: 264 SVEAHVPDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318
            +  ++   L   E      +      P  A + G+ C +GD+     +    V  GD +
Sbjct: 363 GMSDNIRTSLYGAEYEAKLVSRTSEADPVVARIVGKHCESGDVVIRDTWMPEDVGPGDLL 422

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +      Y  +  + +N +  P +       +   +R  +  D  +
Sbjct: 423 AVAATGAYCYSMSSRYNLLTRPAVVAVRDGVSRVILRRETVEDLLS 468


>gi|317970388|ref|ZP_07971778.1| diaminopimelate decarboxylase [Synechococcus sp. CB0205]
          Length = 459

 Score =  204 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 52/394 (13%), Positives = 107/394 (27%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP Y++D+  L  N         +        L A K  ++  +   +     G  + S
Sbjct: 54  GTPLYVLDEATLRGNAQAYRKALASHYPGSALALYASKANSSLAITAVVASEGLGLDAVS 113

Query: 60  LYEVMLGHEK-FGGETHAYNVAYKDCEIDA-VLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             E++   +     E   ++   K  E          T++ +  S L            +
Sbjct: 114 AGELLTAVQGGMPPERIVFHGNNKSLEELQLAADLGVTVVADNWSDLELLASLGLSQPVR 173

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           + LR  P +              S+ G                    V+GL  H   +  
Sbjct: 174 LMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQLEPVLRHLQGCSWALVSGLHAHIGSQIF 233

Query: 171 SFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--- 224
                  +   +             +  +++GGG+     +               +   
Sbjct: 234 ELQPHRDLAAVMADALKLARELGHPVSDLNVGGGLGIRYVESDDPPSIDEWVRTVAEAVA 293

Query: 225 --------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDYLL 274
                      ++  EPG ++V        +V    E         VD  +  +      
Sbjct: 294 GACQDRGLDLPRLLCEPGRSLVATAGVTLYSVGSRKEIPGIRTYLSVDGGMSDNPRPITY 353

Query: 275 YQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                 +  +        T  + G+ C +GD+  +     P + GD ++      YN + 
Sbjct: 354 QSLYTAVLADRPEAEASDTVTLAGKHCESGDVLLKDLALPPAQAGDVLAVFATGAYNASM 413

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            + +N I  P   + +        R     +   
Sbjct: 414 ASNYNRIPRPAAVMVHDGMAELVQRRELPEELLR 447


>gi|167915367|ref|ZP_02502458.1| iron-sulfur cluster-binding protein, rieske family/putative
            carboxynorspermidine decarboxylase [Burkholderia
            pseudomallei 112]
          Length = 1086

 Score =  204 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 103/373 (27%), Positives = 182/373 (48%), Gaps = 12/373 (3%)

Query: 2    IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            + TP ++ D++ L   L +   +  ++G +LL  LK F+  G  + +  ++DG  +SS +
Sbjct: 706  LDTPAFVYDERTLRGALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 765

Query: 62   EVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E           G  H    A +D ++  ++ NCD +  N++SQ  +  D A       G
Sbjct: 766  EAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 824

Query: 120  LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173
            LRINP  S       DP RP S+LG                +  + G+ FH NC++  F 
Sbjct: 825  LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 884

Query: 174  CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
              +  ++++EK     +  + WI+LGGG       Y  +      K   E + V +++EP
Sbjct: 885  RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 943

Query: 234  GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291
            G AIV    T+  +V+D+ ++    + V  +   H P+   YQ    +  +     +  +
Sbjct: 944  GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 1003

Query: 292  VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
            + G SCLAGD+FG + F+ P+++G R++F +   Y + + + FNGIN+P++  +  DG +
Sbjct: 1004 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1063

Query: 352  KAIREFSYNDYYN 364
             A++ FSY D+  
Sbjct: 1064 AAVQRFSYEDFLR 1076


>gi|302853272|ref|XP_002958152.1| DAP decarboxylase [Volvox carteri f. nagariensis]
 gi|300256513|gb|EFJ40777.1| DAP decarboxylase [Volvox carteri f. nagariensis]
          Length = 462

 Score =  204 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 58/381 (15%), Positives = 120/381 (31%), Gaps = 31/381 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           ++P+YL  K ++++N        +        A+K      +   L     G    S  E
Sbjct: 81  ESPFYLYSKNRIMHNYQAYKKALEGLSSLPCYAVKANNNLIIMKELAAAGAGAVLVSGNE 140

Query: 63  VMLGHE-KFGGET-HAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKI 118
           + +     F               E++        I  ++   L      A+K     K+
Sbjct: 141 LKMAMAAGFDPSRTIFNGNGKLPWELELAAEKGVLINIDSEFDLQNIAAAARKTGKKVKV 200

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCENKS 171
            LRINP V              S+ G +        +      +  + G+  H       
Sbjct: 201 LLRINPDVDPQVHPYVSTGLAGSKFGIRNSHIGWFLEAIRAEPLLELVGVHSHLGSTITK 260

Query: 172 FLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEFSE 223
              F     ++    K        ++++++GGG+               D    +++  +
Sbjct: 261 VNIFRDAAVIMCEFVKMIRSEGFNLQYLNIGGGLGIDYSHQGQVLPTPTDLIDTVRDIVK 320

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
           +  + + +EPG ++              +   K+ +++D S+   +   L          
Sbjct: 321 ELGLTLVIEPGRSMGRR--------RVKTNGNKHFIVIDGSMATLIRPSLYGAYQHIELT 372

Query: 284 NTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                   T  V G  C +GD  G+       + GD +   D   Y ++  + +N    P
Sbjct: 373 KPSNAPMETFDVVGPICESGDYLGKDRQLPTPQPGDGLVVHDAGAYCMSMASNYNLKMRP 432

Query: 341 TIAVKNVDGTIKAIR-EFSYN 360
              +    G ++ IR E +  
Sbjct: 433 AEYLVEEGGKLRKIRHEETLE 453


>gi|161833742|ref|YP_001597938.1| diaminopimelate decarboxylase [Candidatus Sulcia muelleri GWSS]
 gi|152206232|gb|ABS30542.1| diaminopimelate decarboxylase [Candidatus Sulcia muelleri GWSS]
          Length = 399

 Score =  204 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 64/383 (16%), Positives = 120/383 (31%), Gaps = 23/383 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP Y+ D  ++                +K+  A K      + +   +   G  + S+ 
Sbjct: 15  GTPLYVYDANQIEFQYKLIKKYFFYIENLKINYACKANTNISILNFFKKLGSGLDTVSIQ 74

Query: 62  EVMLGH-EKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           EV +G    F  +   Y        EI   +     I  + +S L +     +  +  IG
Sbjct: 75  EVEIGLKAGFKPKEIIYTPNGVSLSEIKKAIKAGVLINIDNLSLLEQIGH--ENPNYPIG 132

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSFL 173
           +RI P++              S+ G         K  +E+    V G+  H   +     
Sbjct: 133 IRITPNIIGGGNKKISVGHINSKFGISYYQLPNIKRIVENTGIKVEGIHMHTGSDIIDLE 192

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY------SV 227
            F      +      F  ++++I  G G          K     L  F +K       ++
Sbjct: 193 VFLQGADILLNVASSFN-ELKYIDFGSGFKVPYHKNDTKTDLDMLGVFFKKKISRVCKNI 251

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIY---P 283
           +I  EPG+ +V+ +      V  I          VDS     +                P
Sbjct: 252 KIVFEPGKFLVSESGYFIVKVNVIKHTTSTVFACVDSGFNHFIRPMFYDSYHQIDNLSNP 311

Query: 284 NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343
           +    +  V G  C + D F        ++ GD + F +   Y  +  + +N    P+  
Sbjct: 312 SGKLRSYTVVGYICES-DTFCVNIKINEIREGDILCFRNAGAYCFSMSSNYNSRYRPSEV 370

Query: 344 VKNVDGTIKAIREFSYNDYYNNL 366
           +   + +    R  +  D    +
Sbjct: 371 IIYNNKSFLIRRRENMQDLLKKM 393


>gi|158333611|ref|YP_001514783.1| diaminopimelate decarboxylase [Acaryochloris marina MBIC11017]
 gi|158303852|gb|ABW25469.1| diaminopimelate decarboxylase [Acaryochloris marina MBIC11017]
          Length = 460

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 54/399 (13%), Positives = 117/399 (29%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P Y++D+  L           +       ++L A K ++   +   +     G    S
Sbjct: 52  GSPLYIVDELTLRTACQQYRLSFQKFYPGPSQILYASKAWSCMAISALVANEGLGLDVVS 111

Query: 60  LYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDK-----AQ 112
             E+          ET  ++   K      +  +C   II +   +L +  +      A 
Sbjct: 112 GGELYTALQAGVDPETIYFHGNNKSVPELEMALSCGCTIIADNWLELEQLTELLDTIDAL 171

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHN 165
               ++ LRI P +              S+ G       ++             G   H 
Sbjct: 172 PNPPRVMLRITPGIECHTHEYIRTGHLDSKFGFDPNQIDQALSFAQKNPQITWVGFHAHI 231

Query: 166 NCENKSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRL---- 218
             +         +   I +           +  +++GGG+     +        +     
Sbjct: 232 GSQIFELQPHQDLTSVIVEWLAKAQALGLSMNELNIGGGLGIRYVESDDPPSIAQWSEIV 291

Query: 219 -------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVL------DISENIKNLVIVDSSV 265
                   + +     ++  EPG ++V  +     TV       DI   +     +  + 
Sbjct: 292 CNGISQACQTANIPLPKLLCEPGRSLVGTSCITAYTVGAKKNIPDIRTYLSVDGGMSDNP 351

Query: 266 EAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
                  +     A    ++      V G+ C +GD+  +     P + GD +       
Sbjct: 352 RPITYQSVYSAAIANHMDSSATEIVTVAGKHCESGDVLLKDIPLPPSQPGDILVVMGTGA 411

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           YN +  + +N I+ P   +         ++  +Y D   
Sbjct: 412 YNYSMASNYNRISRPAAVLVQNGDANLILKRETYQDLIR 450


>gi|24380094|ref|NP_722049.1| putative diaminopimelate decarboxylase [Streptococcus mutans UA159]
 gi|290579927|ref|YP_003484319.1| putative diaminopimelate decarboxylase [Streptococcus mutans
           NN2025]
 gi|24378089|gb|AAN59355.1|AE015000_13 putative diaminopimelate decarboxylase [Streptococcus mutans UA159]
 gi|254996826|dbj|BAH87427.1| putative diaminopimelate decarboxylase [Streptococcus mutans
           NN2025]
          Length = 416

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 61/393 (15%), Positives = 122/393 (31%), Gaps = 31/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N+G K   A+K      +   L +   G   ++  
Sbjct: 19  PTPFHLYDEKGIRETARAVNKAFAWNSGFKEFFAVKATPNPTILKILQEEGCGVDCATDV 78

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKI 118
           E+ +  +  F     ++     D +    +          +           A  L + +
Sbjct: 79  ELKMADKLGFDRSAISFTSN--DTQASEFVFARSINATINLDAYEHIAFLEEAAGLPETV 136

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVN--GLMFHNNCEN--- 169
            LR NP   +S       +   S+ G   +   +         V   GL           
Sbjct: 137 SLRFNPGGVFSLGTDIMDHPEESKFGMTKEQLFQGYQDLKDKGVKSFGLHAFLASNTVTN 196

Query: 170 -KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
                  + + +   +        +++I+L GGI         ++    + E   +    
Sbjct: 197 DYYPTLAAQLFELAVEIKNELGISLDFINLSGGIGIDYSAADEQNDIAVIGEGVHQKFDD 256

Query: 229 I-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
           I           Y E G  ++ +   L T VL + +  ++ V VD+S    +   +    
Sbjct: 257 ILVPNGLSQIKIYTELGRYMLASHGHLITKVLHLKDTYRHYVGVDASAVNLLRPAMYDAY 316

Query: 278 SATIYPNTGPYTAM---VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                 +    T     + G  C   D F +       ++GD +   D   +  +    +
Sbjct: 317 HHITNISNPQGTVQVVDIVGSLCENNDKFAKRRELPEARVGDTLVIHDTGAHGFSMGYNY 376

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       +   DG  + IR   +  DY+  L
Sbjct: 377 NGRLRSAEILLREDGQTQMIRRAETPEDYFATL 409


>gi|148241889|ref|YP_001227046.1| diaminopimelate decarboxylase [Synechococcus sp. RCC307]
 gi|147850199|emb|CAK27693.1| Diaminopimelate decarboxylase [Synechococcus sp. RCC307]
          Length = 463

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 53/396 (13%), Positives = 108/396 (27%), Gaps = 34/396 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLL-LALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP Y+ID++ L           +    G  L   A K  ++  +   +     G  + S
Sbjct: 56  GTPLYVIDERSLRQACTAYREALERHYPGPSLAVYASKANSSLAITAVVASEGLGLDAVS 115

Query: 60  LYEVMLGHEK-FGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             E++   E     E    +       E+   + N  T++ +    +   ++ AQ   + 
Sbjct: 116 AGELLTALEGGMPPERIVLHGNNKSSEELALAVQNGVTVVVDNWHDITLLQELAQGRTEP 175

Query: 118 IGLRIN--PSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCE 168
           + L +   P +              S+ G       +            V GL  H   +
Sbjct: 176 VALMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQLEQVLTHLAGCRWARVQGLHAHIGSQ 235

Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
                    +   +            +   +++GGG+                 +   + 
Sbjct: 236 IFEVEPHRDLAAVLADALVLARRLGHEPSDLNVGGGLGIRYVASDDPPSIDGWVQVVAEA 295

Query: 226 SVQIY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDY 272
            V               EPG ++V        TV    +       V     +  +    
Sbjct: 296 MVAACRERNLELPRLLCEPGRSLVAPAGVTLYTVGSRKQIPDLNTYVAVDGGMSDNPRPI 355

Query: 273 LLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
               E      +        T  + G+ C +GD+  +       + GD +       YN 
Sbjct: 356 TYQSEYTACLADRPGAEATETVTLVGKHCESGDVLLKQLPLPATEPGDVLVVLATGAYNA 415

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +  + +N I  P   +          R    ++   
Sbjct: 416 SMASNYNRIPKPAAVLVADGCAELVQRRERPDELLR 451


>gi|225619871|ref|YP_002721128.1| diaminopimelate decarboxylase [Brachyspira hyodysenteriae WA1]
 gi|225214690|gb|ACN83424.1| diaminopimelate decarboxylase [Brachyspira hyodysenteriae WA1]
          Length = 412

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 53/385 (13%), Positives = 115/385 (29%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR-KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+Y+  K  +LN +     +      V ++ A+K      +   + +   G    S+ 
Sbjct: 24  GTPFYIYSKNDILNKIRFLKEVFSPLNDVLIVYAIKAENNLSILKMMAEEGIGADVVSIG 83

Query: 62  E-VMLGHEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKK- 117
           E +         E   ++   K  E        N       ++ +  +  + A++L  K 
Sbjct: 84  ETLKYIKAGGKAENVVFSGVAKTEEEIRKSIELNIKRFNIESIPEAIRINNIAKELKNKV 143

Query: 118 -IGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCEN 169
              +R+NP+V              ++ G          +         +  L  H   + 
Sbjct: 144 KCSIRVNPNVDAHTHEKITTGVNGNKFGISIKTIRENSELLKSLSNIEIESLSMHIGSQM 203

Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFS 222
                F   +  +    G        I  I +GGG           +    F        
Sbjct: 204 TDAEPFYKAILVMRDLIGEINSMGFNITDIDIGGGYGVRYNRDHSGFDFNKFKAESINLL 263

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATI 281
           ++ ++++  EPG   V  +  L   V  I E +    ++ +  +  +V   +    +   
Sbjct: 264 KEMNLRVTTEPGRYFVAESGALIMRVEYIKEELGRKYVILNGGMNDYVRVAMYDAYNEIY 323

Query: 282 YPNTGPY--TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                         G  C + D F        ++ GD ++  D   Y  +  + +N    
Sbjct: 324 PLVKKDNVSNYDFVGPICESSDFFAYDRESSVLEQGDYVALLDAGAYGFSMSSNYNSRLF 383

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
               + +        +  ++ D   
Sbjct: 384 IPQVMIDDKKHYIIRKRQTFEDMIR 408


>gi|212696490|ref|ZP_03304618.1| hypothetical protein ANHYDRO_01028 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676510|gb|EEB36117.1| hypothetical protein ANHYDRO_01028 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 436

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 71/400 (17%), Positives = 139/400 (34%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           KTP Y+ D++ + +   + +   K+   +  ++ A K F+   +   LN+Y       S 
Sbjct: 28  KTPLYIYDQKLIKDTASSFVENFKSEKFETEIIYATKAFSNLYVLGLLNEYNLVFDCVSK 87

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKK 117
            E+ +       GE   ++   K  E      + D   II ++  +     +  +   KK
Sbjct: 88  EEIFVALKAGIKGENIHFHGNNKTKEELIYAIDNDISLIIIDSEDEYYLLDEILKDKKKK 147

Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
               LRINP V          +   S+ G   +D          IE+   N+ G   H  
Sbjct: 148 ASCLLRINPDVKTDTHKFIQTSNADSKFGLNIRDENTEKIIEKIIENPNINLLGFHAHIG 207

Query: 167 CENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            + K+   F      M +  +     F      ++LGGG    +         ++  +  
Sbjct: 208 SQVKNLEFFKEEAKIMAEFTKNIQDKFKKCFSHLNLGGGFGTRENLEDEDLDLEKFLKGL 267

Query: 223 EKYSVQIY-----------LEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHV 269
             +   ++           +EPG ++++   ++   +    I+     L+ VD  +  ++
Sbjct: 268 IVFMEDLFDKNKLSIKNLSIEPGRSLISKAGSILYRLGSSKITMEGYPLIFVDGGMSDNI 327

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   + + I      N    T  V G+ C +GDI  E      V+  D +       
Sbjct: 328 RPSLYGAKYSAILANKLDNEKNQTYRVGGKLCESGDILIEKVKIPKVERDDLLLVPFAGA 387

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  + +N +  P +          A++  S  D    
Sbjct: 388 YTYSMSSNYNKLLKPAVVFVEDGKDYCAVKRQSLEDLIKR 427


>gi|218886112|ref|YP_002435433.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218757066|gb|ACL07965.1| diaminopimelate decarboxylase [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 421

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 55/389 (14%), Positives = 109/389 (28%), Gaps = 31/389 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+  +  L         +  + G  +  + K      +   + +      + S  E
Sbjct: 28  GSPLYVYSEALLRKRCRDMKALSSHPGFFVNYSAKANTNLSLLRIVREEGLVVDAMSPGE 87

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTII-FNTVSQLNKFKDKAQKLHKKIGL 120
           + +     F  +   Y          A   +   ++  +++SQL            K+ +
Sbjct: 88  IHVNKAAGFTPDQILYVCNNVSEAELANAVSHGLLVSVDSLSQLETLGRV--NRGGKVMV 145

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA--- 177
           R NP +              ++ G    +   +E++ +              +       
Sbjct: 146 RFNPGIGAGHHQKVVTAGKATKFGVDPSEASLAELRAILARHDMTLAGINQHIGSLFLEP 205

Query: 178 ----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF----------CQRLKEFSE 223
                  +           +E I  GGG     + Y  +               +  +SE
Sbjct: 206 EGYVAAADFLLSVAEKFDTVEVIDFGGGFGIPYRKYEDQPRLDLAATAERLHALISGWSE 265

Query: 224 K--YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
           +  Y  + Y+EPG  +V     L  TV     N     +        +   ++Y     I
Sbjct: 266 RTGYKGRFYIEPGRYVVAECGLLLGTVHATKNNGPTRYVGTDLGFNVLARPVMYDAHHDI 325

Query: 282 YPNTGP-------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C +GDI         ++ GD +   D   Y     + +
Sbjct: 326 EVYRNNGTPDAALHPQTVVGNICESGDIMARERQLPAIQEGDILGVLDAGAYGYAMSSTY 385

Query: 335 NGINMPTIAVKNVDGT-IKAIREFSYNDY 362
           N    P   +  +DG      R     D 
Sbjct: 386 NQRLRPAEVLIGLDGEPRLIRRREELADL 414


>gi|326386636|ref|ZP_08208258.1| diaminopimelate decarboxylase [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208951|gb|EGD59746.1| diaminopimelate decarboxylase [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 419

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 69/375 (18%), Positives = 116/375 (30%), Gaps = 23/375 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           + TP Y+  +  L  +              K+  A+K      +   L     G    S 
Sbjct: 25  VGTPVYVYSRATLTRHARVFRDALSILPATKIAFAVKSNPNLAVLKVLAAEGYGADVVSG 84

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+          E   ++   K     I A+ +        +  +  +  + AQ+L   
Sbjct: 85  GEMERALAAGMPAEGIVFSGVGKTEAEMIRALEAGIGQFNLESAEEGLELAELAQRLGKT 144

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCE 168
               LR+NP V           +  ++ G       +            + GL  H   +
Sbjct: 145 ATCALRVNPDVDAGTHGKISTGKAENKFGVPFDRAADIFARLSAEPGLAMRGLALHIGSQ 204

Query: 169 NKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD----FCQRLKEF 221
             S     A    I    +E       I  + LGGG+    K   V      +   +   
Sbjct: 205 LSSLAPLEAAFTKIGGLMREIRAAGHAITHMDLGGGVGVPYKAGDVFPQPEEYAAMIARV 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES-- 278
           +  + V +  EPG  I  NT  L T V+ + E + +  +V D+++       L       
Sbjct: 265 TADWGVTLMFEPGRVITGNTGVLVTRVVRVKEGVGHPWVVVDAAMNDLARPALYDAWHDF 324

Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
           A + PN    TA + G  C + D F        V  GD   F     Y     N +N   
Sbjct: 325 AAVTPNGQTITANIVGPICESSDTFAMARDIDEVARGDLAVFRTAGAYGATMANTYNSRP 384

Query: 339 MPTIAVKNVDGTIKA 353
           M    + + +     
Sbjct: 385 MVPEVMVDGERWAVV 399


>gi|302809938|ref|XP_002986661.1| hypothetical protein SELMODRAFT_182543 [Selaginella moellendorffii]
 gi|300145549|gb|EFJ12224.1| hypothetical protein SELMODRAFT_182543 [Selaginella moellendorffii]
          Length = 501

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 67/403 (16%), Positives = 124/403 (30%), Gaps = 43/403 (10%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+YL  K +L  N        +     +  A+K      + +       G    S  E+ 
Sbjct: 94  PFYLYSKPQLSRNFLAYQSALQGISSIVGYAIKANNNVKILEHFRSLGSGAVLVSGNELR 153

Query: 65  LGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIGL 120
           L     F      +N       E+     N   +  ++   L    +  K      ++ L
Sbjct: 154 LALHAGFDPTRCVFNGNGKLPEELVLAAQNDVLVNIDSEFDLAHIVEAGKIANKCVRVLL 213

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCEN--- 169
           RINP V              S+ G + +       +         + G   H        
Sbjct: 214 RINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDEIKQHPNEVKLVGAHCHLGSTITKA 273

Query: 170 ----------------KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----- 208
                             F   + ++     E       ++++++GGG+           
Sbjct: 274 SISFFLFLLRKCVPQVNIFRDAALLMVQYMDEIKSQGFDLKYLNIGGGLGIDYYHTGAVL 333

Query: 209 YPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEA 267
              +D    +++      + + +EPG ++V N   L   V  +  N  KN +++D S+  
Sbjct: 334 PTPRDLVDTVRDLVVSRGLTLIMEPGRSLVANAAALVNRVTGVKTNGNKNFIVIDGSMSE 393

Query: 268 HVPDYLLYQESATIYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFED 322
            +   L                    T  V G  C + D  G+       K GD I   D
Sbjct: 394 LIRPSLYDAYQHIELVAPAGSDAEVKTYDVVGPVCESADFLGKNRELPTPKRGDGIVVHD 453

Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
              Y ++  + +N    P       DG+I  IR   +++D+  
Sbjct: 454 AGAYCMSMASTYNLKMRPPEYWIEDDGSITKIRHAETFDDHLR 496


>gi|260590851|ref|ZP_05856309.1| diaminopimelate decarboxylase [Prevotella veroralis F0319]
 gi|260537202|gb|EEX19819.1| diaminopimelate decarboxylase [Prevotella veroralis F0319]
          Length = 385

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 74/373 (19%), Positives = 134/373 (35%), Gaps = 28/373 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALY-IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           I TP+Y  D   L   L        K+ G  +  A+K  A   + + ++Q   G    S 
Sbjct: 13  IDTPFYYYDCDLLRETLHVIEEEASKHKGYIVHYAVKANANKKVLNLISQTGMGADCVSG 72

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQK--LH 115
            E+    E  F  E   Y    K      +  + D   FN  +  +L      AQK    
Sbjct: 73  GEIQRCLECGFPSEKIVYAGVGKADWEINLGLDNDIFCFNVESEEELEIINKLAQKRGKI 132

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCE 168
             + LRINP V              ++ G   +         +E    N+ GL FH   +
Sbjct: 133 ASVCLRINPEVGAHTHANITTGLAENKFGIALRYVPSIISAALEITHINLIGLHFHIGSQ 192

Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLK 219
               + F    A + +I+ +      ++E I++GGG+               + +     
Sbjct: 193 IMEMQDFQALCARINDIQDDLEKRGVKVENINVGGGLGIDYNDPEGHPIPDFQSYFNTFA 252

Query: 220 EFSE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQE 277
           +  + +   +++ E G ++V    +L T  L + +   +   IVD+ +   +    LYQ 
Sbjct: 253 KHLKLRKEQKVHFELGRSVVGQMGSLITRTLYVKQGKSRQFAIVDAGMSDLLRPA-LYQA 311

Query: 278 SATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
              I   +      +  V G  C + D+F +      V  GD ++      Y  +  + +
Sbjct: 312 HHRIVNLSNTDDLQSYDVVGPICESSDVFAKEVSLPTVHRGDLLAIRSAGAYGESMASQY 371

Query: 335 NGINMPTIAVKNV 347
           N   +PT  + + 
Sbjct: 372 NCRKLPTGYMSDE 384


>gi|163814909|ref|ZP_02206297.1| hypothetical protein COPEUT_01060 [Coprococcus eutactus ATCC 27759]
 gi|158449848|gb|EDP26843.1| hypothetical protein COPEUT_01060 [Coprococcus eutactus ATCC 27759]
          Length = 418

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 63/392 (16%), Positives = 117/392 (29%), Gaps = 30/392 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           I TP+++ D++ +  N          N G K   A+K      +   L +   GT  SSL
Sbjct: 18  IPTPFHIYDEKGIRENARKLYKAFSWNKGFKEYFAVKATPNPTILKILKEEGCGTDCSSL 77

Query: 61  YEVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E+M+     F G+   ++       E         TI  +  + ++  +  A    K  
Sbjct: 78  TELMMSDKMGFKGDEIMFSSNDTPAEEFVLAKKLNATINLDDFTHIDFLEKSAGIPEKIC 137

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFH------NNCE 168
                         + D     ++ G      IE+      K V     H          
Sbjct: 138 CRFNPGGKFSISTTIMDNPG-DAKYGMTKDQIIEAYKILKAKGVKRFGMHAFLASNTVTN 196

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
                    + +   +       ++++I+L GG+          +    + E   K   +
Sbjct: 197 EYYPTLAKILFETAVEIKEKTGVKLDFINLSGGVGIPYTPDKEPNDIMVIGEGVRKVYEE 256

Query: 229 -----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
                      I+ E G  ++     L TT +      K  + VD+     +   +    
Sbjct: 257 VLVPAGMGDVAIFTELGRFMLAPYGHLVTTAIHEKHTHKEYIGVDACAVNLMRPAMYGAY 316

Query: 278 SATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                         +   V G  C   D F        + +GD +   D   +       
Sbjct: 317 HHITVLGKENEPCDHKYDVTGSLCENNDKFAIDRMLPKIDMGDILVIHDTGAHGFAMGYN 376

Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           +NG       +   DG+ + IR   +  DY+ 
Sbjct: 377 YNGKLKSAEVLLRPDGSWRLIRRAETPEDYFA 408


>gi|254185262|ref|ZP_04891851.1| iron-sulfur cluster-binding protein, rieske family/putative
            carboxynorspermidine decarboxylase [Burkholderia
            pseudomallei 1655]
 gi|184215854|gb|EDU12835.1| iron-sulfur cluster-binding protein, rieske family/putative
            carboxynorspermidine decarboxylase [Burkholderia
            pseudomallei 1655]
          Length = 1137

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 103/373 (27%), Positives = 182/373 (48%), Gaps = 12/373 (3%)

Query: 2    IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            + TP ++ D++ L   L +   +  ++G +LL  LK F+  G  + +  ++DG  +SS +
Sbjct: 757  LDTPAFVYDERTLRGALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 816

Query: 62   EVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E           G  H    A +D ++  ++ NCD +  N++SQ  +  D A       G
Sbjct: 817  EAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 875

Query: 120  LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173
            LRINP  S       DP RP S+LG                +  + G+ FH NC++  F 
Sbjct: 876  LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 935

Query: 174  CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
              +  ++++EK     +  + WI+LGGG       Y  +      K   E + V +++EP
Sbjct: 936  RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 994

Query: 234  GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291
            G AIV    T+  +V+D+ ++    + V  +   H P+   YQ    +  +     +  +
Sbjct: 995  GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 1054

Query: 292  VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
            + G SCLAGD+FG + F+ P+++G R++F +   Y + + + FNGIN+P++  +  DG +
Sbjct: 1055 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1114

Query: 352  KAIREFSYNDYYN 364
             A++ FSY D+  
Sbjct: 1115 AAVQRFSYEDFLR 1127


>gi|251796357|ref|YP_003011088.1| diaminopimelate decarboxylase [Paenibacillus sp. JDR-2]
 gi|247543983|gb|ACT01002.1| diaminopimelate decarboxylase [Paenibacillus sp. JDR-2]
          Length = 442

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 62/400 (15%), Positives = 125/400 (31%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++D+  +    +  +   K +G   ++  A K F+   M    +Q        S 
Sbjct: 30  GTPLYIVDETLIRQRANEYVSAFKESGLKFQVAYASKAFSVMAMCAIADQEGLSLDVVSD 89

Query: 61  YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F      ++      D    A+ +N    + +   +L      A  +   
Sbjct: 90  GELYTALQAGFPAARIHFHGNNKTPDEINMALDANIGCFVVDNFVELRMLNALAADKGKK 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
            KI  RI P V           +  S+ G         +  ++ +E     + G+  H  
Sbjct: 150 VKILFRITPGVEAHTHEYISTGQEDSKFGFDLGNGAAKQAIQEALELSNLEILGVHSHIG 209

Query: 167 CENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---- 218
            +      F      ++    +         + I+LGGG      +        +     
Sbjct: 210 SQIFEVDGFRMAVDKVVAFAVQIRDELGLTFKVINLGGGFGIRYVEGDTPLPVAQYVAAI 269

Query: 219 -------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
                     +E    +I++EPG +IV +  T   TV  + +       +     +  + 
Sbjct: 270 TDAVISNFSAAEFPLPEIWVEPGRSIVGDAGTTLYTVGTMKDIPGVRKYIAVDGGMMDNP 329

Query: 270 PDYLLYQESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   I  N        T  + G++C +GD           + GD ++      
Sbjct: 330 RPALYQSQYEAILANRANEANTETVTIAGKACESGDKLIIDLELPKAETGDLLAVSCTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           YN +  + +N    P +       +   ++  S  +   N
Sbjct: 390 YNYSMASNYNRFRRPAVVFVKDGQSDLVVQRESLENIVGN 429


>gi|254456643|ref|ZP_05070072.1| diaminopimelate decarboxylase [Candidatus Pelagibacter sp.
           HTCC7211]
 gi|207083645|gb|EDZ61071.1| diaminopimelate decarboxylase [Candidatus Pelagibacter sp.
           HTCC7211]
          Length = 404

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 65/361 (18%), Positives = 135/361 (37%), Gaps = 21/361 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y     +L  N++      ++    +  A+K      +   + ++  G    S  E
Sbjct: 23  GTPTYCYSHARLKKNINNFQKNFRSFSPLICFAVKSNTNVNLIREIKKFGLGADVVSKGE 82

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKK-- 117
           +M+        +   ++   K  E            I   + S++ +    A+   +K  
Sbjct: 83  LMMALKAGVSPKKIVFSGVGKTSEEINFAVEKKILLINAESESEIREIDRVAKIKKRKVK 142

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           IG+R+NP+            +  ++ G   K   +       S+  ++  L  H   +  
Sbjct: 143 IGIRLNPNTDAKTLSQISTGKKDNKFGVNEKTFFKLVNFCKSSKNIDLKCLSVHIGSQIL 202

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP----VKDFCQRLKEFSEKYS 226
            +  +  MLK I++       + E+I LGGG+  + K          + + +K+F +K+ 
Sbjct: 203 DYKPYEKMLKVIDRIIHKINHKFEFIDLGGGMGISYKYEDKKLNYSKYSEIIKKFLKKHK 262

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES----ATI 281
            +I  EPG +I+ +T  L + ++ I +N     I+ D+++   +   L         +  
Sbjct: 263 SKIIFEPGRSIIGDTGILISKIIYIKKNDSKNFIILDAAMNDLMRPALYGAHHKILPSIK 322

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                  T    G  C + D F      + ++  D I   DV  Y ++  + +N    P+
Sbjct: 323 SKKKSNKTYEFVGPICESTDKFNTLKNFQELEEKDLIVICDVGAYGMSLSSNYNVRLKPS 382

Query: 342 I 342
            
Sbjct: 383 E 383


>gi|94497890|ref|ZP_01304455.1| diaminopimelate decarboxylase [Sphingomonas sp. SKA58]
 gi|94422618|gb|EAT07654.1| diaminopimelate decarboxylase [Sphingomonas sp. SKA58]
          Length = 421

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 60/379 (15%), Positives = 114/379 (30%), Gaps = 24/379 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           + TP Y+     L  ++          +   +  A+K      +  TL +   G    S 
Sbjct: 25  VGTPVYVYSTAALERHVGVFREGLAQLSDPLIAFAVKANPNAAVLATLARLGLGADVVSA 84

Query: 61  YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E++             ++   K  +    A+          +  +       A      
Sbjct: 85  GELLRAVAAGIPASRIVFSGVGKTAEEMRIALDHGIYQFNLESEPEAEMLSQVAAAMGKR 144

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCE 168
             +  RINP V           +  ++ G      ++S          +V G+  H   +
Sbjct: 145 APVAFRINPDVDAGTHAKISTGKSENKFGIPYDRALDSYAAARDLPGLDVQGVAVHIGSQ 204

Query: 169 NKSFLCFSAML---KNIEKEFGHFITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKE 220
                   A       + +        I    LGGG+               D+   +  
Sbjct: 205 LTDLAPLEAAFVKVGALIEVLRAAGHDIRTADLGGGLGVPYDPAQPLPPSPADYGAMVCR 264

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESA 279
            ++ + V++  EPG  IV N   L + V+ + +      VIVD+++   +   L      
Sbjct: 265 VTQSWPVRLMFEPGRVIVGNAGVLLSRVIRVKQGAQAPFVIVDAAMNDLMRPSLYDAWHD 324

Query: 280 T--IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
              + P+    TA V G  C  GD F        V+ G+ ++F     Y       +N  
Sbjct: 325 IRTVKPSGDRATANVVGPVCETGDTFAMHRDMDVVRAGELVAFMTAGAYGATMAGTYNSR 384

Query: 338 NMPTIAVKNVDGTIKAIRE 356
            +    + + D        
Sbjct: 385 PLTPEVLVSGDKWAVVRER 403


>gi|262038388|ref|ZP_06011765.1| diaminopimelate decarboxylase [Leptotrichia goodfellowii F0264]
 gi|261747606|gb|EEY35068.1| diaminopimelate decarboxylase [Leptotrichia goodfellowii F0264]
          Length = 435

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 68/400 (17%), Positives = 130/400 (32%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           +TP Y++D++ +   +D              +  A K F   GM   +          S 
Sbjct: 30  ETPLYVMDQELIETTIDKMKKAFVSSRFDTHIAYAGKAFFTTGMAKIIEAKDLELDVVSG 89

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  +    +   K  E   +  + +   I+ +   ++ K +   ++ +KK
Sbjct: 90  GELYTAYKAGFPMDKVHMHGNNKSYEELEMAIDLEIKQIVIDNEDEIGKIEKICKEKNKK 149

Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
               LRI+P +          +   S+ G            K   +SE     G   H  
Sbjct: 150 QAVLLRIDPGIEAHTHHYIKTSGLTSKFGISLFQKDLLDIIKRINDSEYLEFRGFHTHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            +    + F   L+ I K            +  +++GGG     K+       + + +  
Sbjct: 210 SQIFQSIFFIFALEEIFKYLDKLKKELGIVVHTVNMGGGFGVYYKEGDDPVPVEEVLKEI 269

Query: 223 EKYSVQI-----------YLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
             Y+  +            +EPG +IV N  T    V  I + +  K  V V+  +  ++
Sbjct: 270 ITYTEAMEIKYKIGFKELCIEPGRSIVGNAGTTLYEVGGIKKTVGGKTYVFVNGGMADNI 329

Query: 270 PDYLLYQESA----TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   E                  V G+ C +GDI  E    +   +GD ++      
Sbjct: 330 RPALYQAEYEAGITNKLDKEATNEVTVAGKFCESGDILIEKTKIQEAHVGDILAITTTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y     + +N    P +          A++  ++ D   N
Sbjct: 390 YCYTMSSNYNRFAKPAVVFVKDGKAKLAVKRETFEDLIRN 429


>gi|237507384|ref|ZP_04520099.1| iron-sulfur cluster-binding protein, rieske
            family/carboxynorspermidine decarboxylase [Burkholderia
            pseudomallei MSHR346]
 gi|234999589|gb|EEP49013.1| iron-sulfur cluster-binding protein, rieske
            family/carboxynorspermidine decarboxylase [Burkholderia
            pseudomallei MSHR346]
          Length = 1110

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 103/373 (27%), Positives = 182/373 (48%), Gaps = 12/373 (3%)

Query: 2    IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            + TP ++ D++ L   L +   +  ++G +LL  LK F+  G  + +  ++DG  +SS +
Sbjct: 730  LDTPAFVYDERTLRGALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 789

Query: 62   EVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E           G  H    A +D ++  ++ NCD +  N++SQ  +  D A       G
Sbjct: 790  EAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 848

Query: 120  LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173
            LRINP  S       DP RP S+LG                +  + G+ FH NC++  F 
Sbjct: 849  LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 908

Query: 174  CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
              +  ++++EK     +  + WI+LGGG       Y  +      K   E + V +++EP
Sbjct: 909  RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 967

Query: 234  GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291
            G AIV    T+  +V+D+ ++    + V  +   H P+   YQ    +  +     +  +
Sbjct: 968  GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 1027

Query: 292  VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
            + G SCLAGD+FG + F+ P+++G R++F +   Y + + + FNGIN+P++  +  DG +
Sbjct: 1028 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 1087

Query: 352  KAIREFSYNDYYN 364
             A++ FSY D+  
Sbjct: 1088 AAVQRFSYEDFLR 1100


>gi|237747395|ref|ZP_04577875.1| diaminopimelate decarboxylase [Oxalobacter formigenes HOxBLS]
 gi|229378746|gb|EEO28837.1| diaminopimelate decarboxylase [Oxalobacter formigenes HOxBLS]
          Length = 431

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 60/397 (15%), Positives = 122/397 (30%), Gaps = 36/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA-----GVKLLLALKCFAAWGMFDTLNQYMDGTTS 57
            TP Y+  K  L+ +        K          +  ++K  +   + + L +   G   
Sbjct: 30  GTPLYVYSKTALIEHFHQYADTCKRHETDDIHSLVCYSVKSNSNLAILNILGREGAGFDI 89

Query: 58  SSLYEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL 114
            S  E++             ++   K  E  ++    D       + ++L +    A ++
Sbjct: 90  VSGGELLRVIAAGCDPRKVIFSGVGKTTEEISLALKHDILCFNVESFAELQRINRIASEM 149

Query: 115 HKKIGL--RINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHN 165
            KK  +  R+NP V              ++ G   ++ +            +V G+  H 
Sbjct: 150 GKKARISFRVNPDVDPKTHPYISTGLKENKFGIPFEEALSCYEQASKMTHIDVTGIDCHI 209

Query: 166 NCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
             +          L  +     +      +++ I +GGGI  T  +       + L    
Sbjct: 210 GSQLLDDSPLLEALDKLIGLYDQLAQRNIELQHIDIGGGIGITYDNEEPVAVPEYLSRLF 269

Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVP 270
            K             + I  EPG +I  N   L T V  +   + K+  IVD+++   + 
Sbjct: 270 RKIGEWKNANYPGKPLAIMFEPGRSISGNAGLLLTQVQYLKTNSDKHFAIVDAAMNDLMR 329

Query: 271 DYLLYQES---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
             L          +  N    T  V G  C +GD          ++  D ++      Y 
Sbjct: 330 PSLYEAWHTVLPVVKRNGSALTYDVVGPVCESGDWLARQRKLS-IEADDYLAVMSAGAYG 388

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +   + +N        + +        +     + Y 
Sbjct: 389 MAMASNYNTRGRAAEVLVDNGQVHLIRQRERAEELYA 425


>gi|167907022|ref|ZP_02494227.1| iron-sulfur cluster-binding protein, rieske
           family/carboxynorspermidine decarboxylase [Burkholderia
           pseudomallei NCTC 13177]
          Length = 416

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 103/373 (27%), Positives = 182/373 (48%), Gaps = 12/373 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP ++ D++ L   L +   +  ++G +LL  LK F+  G  + +  ++DG  +SS +
Sbjct: 36  LDTPAFVYDERTLRGALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 95

Query: 62  EVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E           G  H    A +D ++  ++ NCD +  N++SQ  +  D A       G
Sbjct: 96  EAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 154

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173
           LRINP  S       DP RP S+LG                +  + G+ FH NC++  F 
Sbjct: 155 LRINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFS 214

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
             +  ++++EK     +  + WI+LGGG       Y  +      K   E + V +++EP
Sbjct: 215 RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 273

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291
           G AIV    T+  +V+D+ ++    + V  +   H P+   YQ    +  +     +  +
Sbjct: 274 GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 333

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
           + G SCLAGD+FG + F+ P+++G R++F +   Y + + + FNGIN+P++  +  DG +
Sbjct: 334 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 393

Query: 352 KAIREFSYNDYYN 364
            A++ FSY D+  
Sbjct: 394 AAVQRFSYEDFLR 406


>gi|227529334|ref|ZP_03959383.1| diaminopimelate decarboxylase [Lactobacillus vaginalis ATCC 49540]
 gi|227350762|gb|EEJ41053.1| diaminopimelate decarboxylase [Lactobacillus vaginalis ATCC 49540]
          Length = 443

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 65/398 (16%), Positives = 128/398 (32%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D  ++   + +   +     V   +  A K FAA  M+             S 
Sbjct: 38  GTPLVVYDVSQIRQQIRSFRRVFDANHVDYAVSYASKAFAAIAMYQVAAAEGAHVDVVSA 97

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK- 116
            E+       F  E  +++   K  E   +    +  TI+ +   ++       ++ ++ 
Sbjct: 98  GELYTAIKADFPIERVSFHGNNKSREELEMAIDHHVGTIMIDNFHEIELLATVLEERNES 157

Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
             + LRI P +S          +  S+ G         E  +  + +    + GL  H  
Sbjct: 158 VDVMLRITPGISAHTNKYIQTGQVDSKFGFDLQSGQADEALQKVLANPRMKMRGLHAHIG 217

Query: 167 CENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK--------DF 214
            +      F      +++        F  + + I++GGG                     
Sbjct: 218 SQIFELAGFEGVAKKLVEVAAHWRDEFGYEAQVINVGGGFGIRYVAADHPLKPEEFVDAI 277

Query: 215 CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
            + +K+ + +       I++EPG +IV        TV    +    K  V VD  +  ++
Sbjct: 278 IKAIKKETAEKGLSMPAIWIEPGRSIVGPAGYNLYTVGSRKDVPGLKPYVTVDGGMGDNI 337

Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   E  T+  +           + G+ C +GDI  +       + GD ++  D   
Sbjct: 338 RPALYQAEYETVLASNPQAPIKEHVRLAGKYCESGDILAQDQGLPETQPGDVLAMLDTGA 397

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
           Y  +  + +N    P +           I   S  D  
Sbjct: 398 YGYSMASNYNRNPRPAVVFAEDGKAQLVIERESLADLV 435


>gi|197119232|ref|YP_002139659.1| ornithine/diaminopimelate/arginine decarboxylase-like protein TabA
           [Geobacter bemidjiensis Bem]
 gi|197088592|gb|ACH39863.1| ornithine/diaminopimelate/arginine decarboxylase-related protein
           TabA [Geobacter bemidjiensis Bem]
          Length = 421

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 56/391 (14%), Positives = 122/391 (31%), Gaps = 34/391 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +TP+++ D+  +       +       G +   A+K      +   + +   G   SS+ 
Sbjct: 23  QTPFHIYDESGIRETGAQLVKAFSGIPGFREFFAVKALPNREILKLMKEMGFGFDCSSIP 82

Query: 62  EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           EV+L  E     E   +      ++    A       +  + +S + K          ++
Sbjct: 83  EVILARELGARPEDIMFTSNNTSQEEFDFATQDGGCIMNLDDISLIEKVPH-----FPEM 137

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCE---- 168
                         +   N   ++ G   +  +E+  +         GL           
Sbjct: 138 ICFRYNPGPRRTGNVIIGNPEEAKYGVSHEQVVEAYRQAKERGATRFGLHTMVASNELDY 197

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK---- 224
                    +L+  E+       + E++++GGG     +         R+     +    
Sbjct: 198 TYIVETARMVLEVAEEVEAALGIKFEFVNIGGGFGIPYRPEQKTLDLARMSAEVTELFDG 257

Query: 225 ------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                 ++  +++E G  +      L TT ++  +  +  + VD+ + A +   L     
Sbjct: 258 FRKRHGHAPAMFMESGRFMTGPHGALVTTAINSKDTYRRYIGVDACMSALMRPALYGAYH 317

Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                            V G  C   D F      +P++ GD +   D   +       +
Sbjct: 318 HIDVLGKDRDPKTEIYDVVGSLCENNDKFAVQRELQPIEDGDILVIHDSGAHGHAMGFQY 377

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG   P   +   DG ++ IR   +  DY+ 
Sbjct: 378 NGRLRPKELMLRADGRVELIRRAETVEDYFA 408


>gi|292655256|ref|YP_003535153.1| diaminopimelate decarboxylase [Haloferax volcanii DS2]
 gi|291370043|gb|ADE02270.1| diaminopimelate decarboxylase [Haloferax volcanii DS2]
          Length = 415

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 54/377 (14%), Positives = 115/377 (30%), Gaps = 20/377 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+ D +++  N              +  A+K  A   + +T+ +       +S  E
Sbjct: 27  GSPLYVTDLRRVRENCLRLREAFPE--AHVSYAVKAHAGRAVLETVREAGVDAECASAGE 84

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL---NKFKDKAQKLHKKI 118
           V       F GE   Y            + +           +   +      ++     
Sbjct: 85  VERALDAGFPGERVRYTAVNPPDADLDHVVSRWESNPEMTVTVGAADTIDRLRERGFDGR 144

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD-----KIESEIKNVNGLMFHNNCENKSFL 173
                     +           ++ G              E  ++ G+  H         
Sbjct: 145 LCLRANPGVGAGHHEKVTTGGHAKFGIPIDRVPDLAADVREEFDLVGVHAHAGSGISGDD 204

Query: 174 CFSAM-LKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSVQ 228
             +   L     +    +  +E++ +GGG             +       +E   +   Q
Sbjct: 205 LSAHRELVRRMGDLAREVGGLEFVDVGGGFGVPYREDEPPLDLAAVADATREALGEVDAQ 264

Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATI---YPN 284
           + +EPG  +V +   L + V  + E  +  V+ +D+ +   +   +     A      P+
Sbjct: 265 LAVEPGRYVVADAGVLLSRVNTVKEVPETTVVGIDAGMTTLLRPAMYDAYHAISNLSRPD 324

Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344
             P + +V G  C   D+F +       + GD ++  +   Y     + +N    P   V
Sbjct: 325 ADPVSTIVAGPVCETSDVFADGRDLPDPERGDCLALGNAGAYGYEMASTYNSRPRPPEVV 384

Query: 345 KNVDGTIKAIREFSYND 361
            + DG   A R  + +D
Sbjct: 385 LDADGPRLARRRETLHD 401


>gi|256390400|ref|YP_003111964.1| diaminopimelate decarboxylase [Catenulispora acidiphila DSM 44928]
 gi|256356626|gb|ACU70123.1| diaminopimelate decarboxylase [Catenulispora acidiphila DSM 44928]
          Length = 465

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 58/398 (14%), Positives = 119/398 (29%), Gaps = 38/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP YLID+          +     A   +  A K F +  +     +        S  E
Sbjct: 64  GTPAYLIDEDDWRRRAREWVEAF-GADADVFYAGKSFLSVAIAKWAAEEGLHLDVCSGGE 122

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           + +     F  E   ++   K       AV +    II ++  ++ +    A  + + ++
Sbjct: 123 LAVALRAGFPAERLGFHGNNKSVAELERAVDAGVGRIIVDSHDEIERLAAIAADRGVRQR 182

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC----------KDKIESEIKNVNGLMFHNNC 167
           + LR+ P V               + G             +    ++   + GL  H   
Sbjct: 183 VMLRVTPGVEAHTHEFIATAHEDQKFGFSLAGGAAAEAVARLLKHADHLELTGLHSHIGS 242

Query: 168 ENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223
           +      F      + + +         ++  + LGGG+     +              +
Sbjct: 243 QIFDTAGFEVAAHRLTEALAAIKRDHGIELPELDLGGGLGIAYTEGDDPAPVAETARRLK 302

Query: 224 K-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVP 270
           +              ++ +EPG AI          V  +      +  V VD  +  ++ 
Sbjct: 303 EIVARECDAAGLTRPRLSVEPGRAIAGPPGITLYEVGTVKPLPGLRTYVSVDGGMSDNIR 362

Query: 271 DYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAG 325
             L   E      +      P  + V G+ C +GDI     +       GD ++      
Sbjct: 363 TALYDAEYTAALVSRSSTAVPVLSRVVGKHCESGDIVVRDAWLPGDTAPGDLLAIAATGA 422

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
           Y  +  + +N +  P +           +R  + +D  
Sbjct: 423 YCRSMASNYNHLLKPPVIAVKDGAARTIVRRETEDDLL 460


>gi|139437267|ref|ZP_01771427.1| Hypothetical protein COLAER_00406 [Collinsella aerofaciens ATCC
           25986]
 gi|133776914|gb|EBA40734.1| Hypothetical protein COLAER_00406 [Collinsella aerofaciens ATCC
           25986]
          Length = 769

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 61/399 (15%), Positives = 119/399 (29%), Gaps = 35/399 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D+  +  N+         N G K   A+K      +   LN+Y  G   SS  
Sbjct: 29  PTPFHLYDEAGIRRNMQEVRDAFAWNPGFKEYFAVKANPNPALISILNEYGCGCDCSSYT 88

Query: 62  EVMLGHE-KFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+M+       G    ++       + +        + F+ +S +  ++  A  + K + 
Sbjct: 89  ELMIARSLGITGHDIMFSSNDTPAADFELADKLGAIVNFDDISHIEFYERVAGPIPKTVS 148

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN---- 169
            R NP   +        N   S+ G   +        ++++     G+            
Sbjct: 149 CRFNPGGLFQLSNGIMDNPGDSKYGMTTEQLFDAFRMLKAKGAEDFGIHAFLASNTVTND 208

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
                   + +   +        + +I+L GG+          +    + E       +I
Sbjct: 209 YYPKLARILFELAVRLERETGAHVAFINLSGGVGIPYLPEQQANDIHAIGEGVHAAYDEI 268

Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                        E G  ++     L T  +      K+ + VD+S    +   +     
Sbjct: 269 LVPAGMGDVAICTEMGRFMMGPYGCLVTKAIHEKRIYKDYIGVDASAVDLIRPAMYGAYH 328

Query: 279 ATIYPNTG----------PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
                               T  + G  C   D F        + +GD +   D   +  
Sbjct: 329 HVTVMGQPGGPDKSAAPVTNTYDITGNLCENNDKFAIDRELPHIDMGDLLVIHDTGAHGY 388

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           +    +NG       +   DG    IR      DY++ L
Sbjct: 389 SMGYNYNGRLRSAEVLLRPDGAADLIRRAERPGDYFSTL 427


>gi|167724092|ref|ZP_02407328.1| iron-sulfur cluster-binding protein, rieske family/putative
           carboxynorspermidine decarboxylase [Burkholderia
           pseudomallei DM98]
          Length = 419

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 103/373 (27%), Positives = 182/373 (48%), Gaps = 12/373 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP ++ D++ L   L +   +  ++G +LL  LK F+  G  + +  ++DG  +SS +
Sbjct: 39  LDTPAFVYDERTLRGALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPF 98

Query: 62  EVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E           G  H    A +D ++  ++ NCD +  N++SQ  +  D A       G
Sbjct: 99  EAAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCG 157

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173
           LRINP  S       DP RP S+LG                +  + G+ FH NC++  F 
Sbjct: 158 LRINPQYSVVADARYDPCRPHSKLGVPLDVIERVVASDPRALHGLQGIHFHTNCDSTDFS 217

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
             +  ++++EK     +  + WI+LGGG       Y  +      K   E + V +++EP
Sbjct: 218 RLAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEP 276

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAM 291
           G AIV    T+  +V+D+ ++    + V  +   H P+   YQ    +  +     +  +
Sbjct: 277 GAAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYL 336

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
           + G SCLAGD+FG + F+ P+++G R++F +   Y + + + FNGIN+P++  +  DG +
Sbjct: 337 LAGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGAL 396

Query: 352 KAIREFSYNDYYN 364
            A++ FSY D+  
Sbjct: 397 AAVQRFSYEDFLR 409


>gi|188993964|ref|YP_001928216.1| diaminopimelate decarboxylase [Porphyromonas gingivalis ATCC 33277]
 gi|188995136|ref|YP_001929388.1| putative diaminopimelate decarboxylase [Porphyromonas gingivalis
           ATCC 33277]
 gi|188593644|dbj|BAG32619.1| diaminopimelate decarboxylase [Porphyromonas gingivalis ATCC 33277]
 gi|188594816|dbj|BAG33791.1| putative diaminopimelate decarboxylase [Porphyromonas gingivalis
           ATCC 33277]
          Length = 382

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 72/381 (18%), Positives = 121/381 (31%), Gaps = 35/381 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTP+Y  D   L   L           V +  ALK      +  T+     G    S +
Sbjct: 1   MKTPFYFYDLTLLERTLSALARSAGRHDVAIHYALKANNHPRILQTIGAAGFGADCVSGW 60

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116
           E+    E  F      +    K  E   +         +  +V +L   +  A   +   
Sbjct: 61  EIEAAIEAGFPASDIFFAGVGKSDEEILLALEARIGAFVVESVPELLNIERLAGSKNDIA 120

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV-------NGLMFHNNCEN 169
            I LR+NP V              ++ G   +D        +        GL FH   + 
Sbjct: 121 PILLRLNPEVDAHTHSHITTGLAENKFGLLPEDAFALMPHLLQSGSLVWRGLHFHIGSQI 180

Query: 170 KSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKE 220
           +S   F  + +   +    F       + I +GGG+                 + +R + 
Sbjct: 181 RSAKVFEELCEKTNRILASFRTAGYSPDIIDMGGGLGINYDEPEAEPIPDFATYIERYRR 240

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESA 279
             E    ++++EPG ++V    +L T VL I E   K   IVD+ +   V   L      
Sbjct: 241 MIETGEARLHIEPGRSVVAQCGSLITQVLYIKEGKAKKFAIVDAGMTDLVRPALYEAHHQ 300

Query: 280 TIYPNTGPYT-------------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
                 G +T               V G  C + D+F        +K GD ++      Y
Sbjct: 301 IRLVQPGEWTMRATSPSAALTEKYDVVGPICESSDVFERELLMPELKRGDYLAIRSAGAY 360

Query: 327 NINRKNWFNGINMPTIAVKNV 347
                + +N   +P     + 
Sbjct: 361 GAVMASSYNMRPLPGSLFSDE 381


>gi|322369890|ref|ZP_08044452.1| diaminopimelate decarboxylase [Haladaptatus paucihalophilus DX253]
 gi|320550226|gb|EFW91878.1| diaminopimelate decarboxylase [Haladaptatus paucihalophilus DX253]
          Length = 415

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 61/380 (16%), Positives = 112/380 (29%), Gaps = 21/380 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ID +++  N              +  A K   +  + +TL         +S  E
Sbjct: 31  DTPLYVIDLERVRENYARLAAAF--PDADVHFAAKANTSRAVLETLEAEGASIECASAGE 88

Query: 63  VMLG-HEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFN-TVSQLNKFKDKAQKLHKKI 118
                   F GE   Y            AV    D      TV   +     A++ +   
Sbjct: 89  TERAFAAGFEGERVHYTAVNPPGIDLDRAVELAADHPGLTVTVGAADTIDRLAERGYDGR 148

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-----SEIKNVNGLMFHNNCENKSFL 173
                     +           ++ G             ++  +V G+  H         
Sbjct: 149 LCLRVNPGVGAGHHEKVRTGADAKFGVPYDRAASLLESAADDFDVVGIHAHAGSGISGDD 208

Query: 174 --CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK----DFCQRLKEFSEKYSV 227
                 ++  + +        +E++ +GGG                     ++       
Sbjct: 209 LGNHRELVSRMGELARTIDPDLEFVDVGGGFGVPYHPDDPPLDLESVADATRDALGDLDA 268

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESAT--IYPN 284
            + +EPG  +V +   L T V  + E  +  V+ VD+ + A V   L         +  +
Sbjct: 269 TLVVEPGRYLVADAGVLLTRVNTVKEAPETTVVGVDAGMTALVRPALYDSYHHIRSVGAD 328

Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344
                  V G  C + D FG          GD ++  +   Y     + +N    P + V
Sbjct: 329 GQAVETTVAGPICESSDTFGTH-LLADPTRGDLLAVGNAGAYGYEMASQYNSRPRPAVVV 387

Query: 345 KNVDGTIKAIREFSYNDYYN 364
            + D T  A R  ++ D   
Sbjct: 388 VDGDRTGVAHRRETHADVIA 407


>gi|293399853|ref|ZP_06643999.1| diaminopimelate decarboxylase [Erysipelotrichaceae bacterium
           5_2_54FAA]
 gi|291306253|gb|EFE47496.1| diaminopimelate decarboxylase [Erysipelotrichaceae bacterium
           5_2_54FAA]
          Length = 429

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 67/395 (16%), Positives = 124/395 (31%), Gaps = 37/395 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           +TP Y+ D+ K+   L     + ++     ++L A K F+   M + + QY       S 
Sbjct: 22  QTPLYIYDENKITEKLSRFHELFQSDTFKTEVLYASKAFSCKAMVELVAQYGLSLDVVSG 81

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK--LH 115
            E+       F  E   ++   K  +   +       TII +   + +      ++    
Sbjct: 82  GELYTAKQAGFPMERVYFHGNNKSYDEIMMALDYGVGTIIVDNAMECDMLVKAVKRSGRS 141

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC--KDKIESEIKNVN--------GLMFHN 165
            K  LR+NP V              S+ G     K +I + I  +         G   H 
Sbjct: 142 IKTMLRVNPGVEAHTHKYIVTAHLDSKFGISITKKKEIAAMIHTLTSVAEITFLGYHSHI 201

Query: 166 NCENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEF 221
             +             +++  ++    +   I  ++LGGG      +       Q +   
Sbjct: 202 GSQIFDKQAYVAEIEKLMQFTKEMQTEYDIHISALNLGGGFAALYTNADHPIPLQDVCHT 261

Query: 222 SEKYSVQ-----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHV 269
                 +           I +EPG +IV    +    V    +      I  D  +  ++
Sbjct: 262 ILDTCKKENAKQQLNIEKIMIEPGRSIVAEAGSTLYRVGYQKQTEHKKYIFVDGGMSDNI 321

Query: 270 PDYLLYQESAT----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   E A             T  + G+ C +GDI  E      V   D +       
Sbjct: 322 RPALYQAEYACDIANRMQEDKTETVTIAGKCCESGDILIENAKLPKVSQNDLLIIYTTGA 381

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           Y  +  + +N +  P +           I++ SY 
Sbjct: 382 YGYSMASNYNKLGRPAVVFVKDGHARVVIKKESYE 416


>gi|317010571|gb|ADU84318.1| diaminopimelate decarboxylase [Helicobacter pylori SouthAfrica7]
          Length = 405

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 70/385 (18%), Positives = 124/385 (32%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP+YL D  K+     +     K     +  ALK  +   +   L     G    SL E
Sbjct: 12  KTPFYLYDFDKIKQAFLSYKEAFKGRKSLICYALKANSNLSILSLLASLESGADCVSLGE 71

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++   K        +  N   +   +  +L   +  AQ L  K  
Sbjct: 72  IQRALKAGIKPYRIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIEKIAQSLGIKAR 131

Query: 120 LRI--NPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           + +  NP++              ++ G + K+ +E       S       + FH   +  
Sbjct: 132 ISVRINPNIDAKTHPYISTGLKENKFGVEEKEALEMFLWAKKSAFLEPISVHFHIGSQLL 191

Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224
                      +  I K        + +  +GGGI    ++       D+ Q +    + 
Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVGYENEETIKLYDYAQGILNALQG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I  EPG +IV  +  L T VL       K  VIVD+ +   +   L + + A    
Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVI 311

Query: 284 NTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       V G  C + D F +      +K GD+++ E V  Y  +  + +N    
Sbjct: 312 TPSKSDKISPCDVVGPVCESSDTFLKEVNLPELKPGDKLAIEKVGAYGSSMASQYNSRPK 371

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
                          ++ S  D + 
Sbjct: 372 LLELALEDHKIRVIRKKESLEDLWR 396


>gi|308375427|ref|ZP_07443849.2| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
           SUMu007]
 gi|308346422|gb|EFP35273.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
           SUMu007]
          Length = 470

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 53/406 (13%), Positives = 123/406 (30%), Gaps = 45/406 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ID+    +           +G  +  A K F    +   +++        +  E
Sbjct: 62  GTPLFVIDEDDFRSRCRETAAAF-GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGE 120

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F  E    +   K       AV +    I+ ++++++ +    A +    + 
Sbjct: 121 LAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQD 180

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G            +    ++   + GL  H   +
Sbjct: 181 VLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQ 240

Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F          +    G F  +    I  + LGGG+  +            L  
Sbjct: 241 IFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAA 300

Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS----- 264
                           + ++ +EPG AI    T     V  + +   +            
Sbjct: 301 KLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDG 360

Query: 265 -VEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318
            +  ++   L   +      +   +  P  A + G+ C +GDI     +    ++ GD +
Sbjct: 361 GMSDNIRTALYGAQYDVRLVSRVSDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLV 420

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +      Y  +  + +N +  P +   +       +R  + +D  +
Sbjct: 421 AVAATGAYCYSLSSRYNMVGRPAVVAVHAGNARLVLRRETVDDLLS 466


>gi|308373102|ref|ZP_07431007.2| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
           SUMu005]
 gi|308338874|gb|EFP27725.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
           SUMu005]
          Length = 425

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 53/406 (13%), Positives = 123/406 (30%), Gaps = 45/406 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ID+    +           +G  +  A K F    +   +++        +  E
Sbjct: 17  GTPLFVIDEDDFRSRCRETAAAF-GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGE 75

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F  E    +   K       AV +    I+ ++++++ +    A +    + 
Sbjct: 76  LAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQD 135

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G            +    ++   + GL  H   +
Sbjct: 136 VLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQ 195

Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F          +    G F  +    I  + LGGG+  +            L  
Sbjct: 196 IFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAA 255

Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS----- 264
                           + ++ +EPG AI    T     V  + +   +            
Sbjct: 256 KLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDG 315

Query: 265 -VEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318
            +  ++   L   +      +   +  P  A + G+ C +GDI     +    ++ GD +
Sbjct: 316 GMSDNIRTALYGAQYDVRLVSRVSDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLV 375

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +      Y  +  + +N +  P +   +       +R  + +D  +
Sbjct: 376 AVAATGAYCYSLSSRYNMVGRPAVVAVHAGNARLVLRRETVDDLLS 421


>gi|308231803|ref|ZP_07413799.2| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
           SUMu001]
 gi|308370005|ref|ZP_07419962.2| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
           SUMu002]
 gi|308370683|ref|ZP_07422337.2| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
           SUMu003]
 gi|308371932|ref|ZP_07426700.2| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
           SUMu004]
 gi|308374279|ref|ZP_07435413.2| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
           SUMu006]
 gi|308377688|ref|ZP_07480041.2| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
           SUMu009]
 gi|308378900|ref|ZP_07484233.2| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
           SUMu010]
 gi|308380036|ref|ZP_07488456.2| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
           SUMu011]
 gi|308216082|gb|EFO75481.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
           SUMu001]
 gi|308325586|gb|EFP14437.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
           SUMu002]
 gi|308331250|gb|EFP20101.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
           SUMu003]
 gi|308335066|gb|EFP23917.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
           SUMu004]
 gi|308342559|gb|EFP31410.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
           SUMu006]
 gi|308354994|gb|EFP43845.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
           SUMu009]
 gi|308358942|gb|EFP47793.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
           SUMu010]
 gi|308362850|gb|EFP51701.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
           SUMu011]
          Length = 491

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 53/406 (13%), Positives = 123/406 (30%), Gaps = 45/406 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ID+    +           +G  +  A K F    +   +++        +  E
Sbjct: 83  GTPLFVIDEDDFRSRCRETAAAF-GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGE 141

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F  E    +   K       AV +    I+ ++++++ +    A +    + 
Sbjct: 142 LAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQD 201

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G            +    ++   + GL  H   +
Sbjct: 202 VLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQ 261

Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F          +    G F  +    I  + LGGG+  +            L  
Sbjct: 262 IFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAA 321

Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS----- 264
                           + ++ +EPG AI    T     V  + +   +            
Sbjct: 322 KLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDG 381

Query: 265 -VEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318
            +  ++   L   +      +   +  P  A + G+ C +GDI     +    ++ GD +
Sbjct: 382 GMSDNIRTALYGAQYDVRLVSRVSDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLV 441

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +      Y  +  + +N +  P +   +       +R  + +D  +
Sbjct: 442 AVAATGAYCYSLSSRYNMVGRPAVVAVHAGNARLVLRRETVDDLLS 487


>gi|260186230|ref|ZP_05763704.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
           CPHL_A]
 gi|289446888|ref|ZP_06436632.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
           CPHL_A]
 gi|289419846|gb|EFD17047.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
           CPHL_A]
          Length = 447

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 53/406 (13%), Positives = 123/406 (30%), Gaps = 45/406 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ID+    +           +G  +  A K F    +   +++        +  E
Sbjct: 39  GTPLFVIDEDDFRSRCRETAAAF-GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGE 97

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F  E    +   K       AV +    I+ ++++++ +    A +    + 
Sbjct: 98  LAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQD 157

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G            +    ++   + GL  H   +
Sbjct: 158 VLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQ 217

Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F          +    G F  +    I  + LGGG+  +            L  
Sbjct: 218 IFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAA 277

Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS----- 264
                           + ++ +EPG AI    T     V  + +   +            
Sbjct: 278 KLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDG 337

Query: 265 -VEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318
            +  ++   L   +      +   +  P  A + G+ C +GDI     +    ++ GD +
Sbjct: 338 GMSDNIRTALYGAQYDVRLVSRVSDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLV 397

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +      Y  +  + +N +  P +   +       +R  + +D  +
Sbjct: 398 AVAATGAYCYSLSSRYNMVGRPAVVAVHAGNARLVLRRETVDDLLS 443


>gi|157878196|pdb|1HKV|A Chain A, Mycobacterium Diaminopimelate Dicarboxylase (Lysa)
 gi|157878197|pdb|1HKV|B Chain B, Mycobacterium Diaminopimelate Dicarboxylase (Lysa)
          Length = 447

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 53/406 (13%), Positives = 123/406 (30%), Gaps = 45/406 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ID+    +           +G  +  A K F    +   +++        +  E
Sbjct: 38  GTPLFVIDEDDFRSRCRETAAAF-GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGE 96

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F  E    +   K       AV +    I+ ++++++ +    A +    + 
Sbjct: 97  LAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQD 156

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G            +    ++   + GL  H   +
Sbjct: 157 VLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQ 216

Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F          +    G F  +    I  + LGGG+  +            L  
Sbjct: 217 IFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAA 276

Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS----- 264
                           + ++ +EPG AI    T     V  + +   +            
Sbjct: 277 KLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDG 336

Query: 265 -VEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318
            +  ++   L   +      +   +  P  A + G+ C +GDI     +    ++ GD +
Sbjct: 337 GMSDNIRTALYGAQYDVRLVSRVSDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLV 396

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +      Y  +  + +N +  P +   +       +R  + +D  +
Sbjct: 397 AVAATGAYCYSLSSRYNMVGRPAVVAVHAGNARLVLRRETVDDLLS 442


>gi|15608433|ref|NP_215809.1| diaminopimelate decarboxylase LysA [Mycobacterium tuberculosis
           H37Rv]
 gi|15840743|ref|NP_335780.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis CDC1551]
 gi|31792486|ref|NP_854979.1| diaminopimelate decarboxylase LysA [Mycobacterium bovis AF2122/97]
 gi|121637222|ref|YP_977445.1| putative diaminopimelate decarboxylase lysA [Mycobacterium bovis
           BCG str. Pasteur 1173P2]
 gi|148661081|ref|YP_001282604.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis H37Ra]
 gi|148822511|ref|YP_001287265.1| diaminopimelate decarboxylase lysA (dap decarboxylase)
           [Mycobacterium tuberculosis F11]
 gi|167969618|ref|ZP_02551895.1| diaminopimelate decarboxylase lysA (dap decarboxylase)
           [Mycobacterium tuberculosis H37Ra]
 gi|215403133|ref|ZP_03415314.1| diaminopimelate decarboxylase lysA (dap decarboxylase)
           [Mycobacterium tuberculosis 02_1987]
 gi|215410930|ref|ZP_03419738.1| diaminopimelate decarboxylase lysA (dap decarboxylase)
           [Mycobacterium tuberculosis 94_M4241A]
 gi|215426613|ref|ZP_03424532.1| diaminopimelate decarboxylase lysA (dap decarboxylase)
           [Mycobacterium tuberculosis T92]
 gi|215430178|ref|ZP_03428097.1| diaminopimelate decarboxylase lysA (dap decarboxylase)
           [Mycobacterium tuberculosis EAS054]
 gi|215445470|ref|ZP_03432222.1| diaminopimelate decarboxylase lysA (dap decarboxylase)
           [Mycobacterium tuberculosis T85]
 gi|218752999|ref|ZP_03531795.1| diaminopimelate decarboxylase lysA (dap decarboxylase)
           [Mycobacterium tuberculosis GM 1503]
 gi|219557192|ref|ZP_03536268.1| diaminopimelate decarboxylase lysA (dap decarboxylase)
           [Mycobacterium tuberculosis T17]
 gi|224989697|ref|YP_002644384.1| putative diaminopimelate decarboxylase [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253799661|ref|YP_003032662.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis KZN
           1435]
 gi|254231551|ref|ZP_04924878.1| diaminopimelate decarboxylase lysA (dap decarboxylase)
           [Mycobacterium tuberculosis C]
 gi|254364190|ref|ZP_04980236.1| diaminopimelate decarboxylase lysA (dap decarboxylase)
           [Mycobacterium tuberculosis str. Haarlem]
 gi|254550300|ref|ZP_05140747.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260200344|ref|ZP_05767835.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis T46]
 gi|260204549|ref|ZP_05772040.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis K85]
 gi|289442732|ref|ZP_06432476.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis T46]
 gi|289554917|ref|ZP_06444127.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis KZN
           605]
 gi|289569303|ref|ZP_06449530.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis T17]
 gi|289573956|ref|ZP_06454183.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis K85]
 gi|289745039|ref|ZP_06504417.1| diaminopimelate decarboxylase LysA [Mycobacterium tuberculosis
           02_1987]
 gi|289749846|ref|ZP_06509224.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis T92]
 gi|289753370|ref|ZP_06512748.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
           EAS054]
 gi|289757393|ref|ZP_06516771.1| diaminopimelate decarboxylase LysA [Mycobacterium tuberculosis T85]
 gi|289761448|ref|ZP_06520826.1| diaminopimelate decarboxylase lysA (dap decarboxylase)
           [Mycobacterium tuberculosis GM 1503]
 gi|294994848|ref|ZP_06800539.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis 210]
 gi|297633843|ref|ZP_06951623.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis KZN 4207]
 gi|297730830|ref|ZP_06959948.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis KZN R506]
 gi|298524797|ref|ZP_07012206.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis
           94_M4241A]
 gi|306802991|ref|ZP_07439659.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
           SUMu008]
 gi|307083855|ref|ZP_07492968.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
           SUMu012]
 gi|313658162|ref|ZP_07815042.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis KZN
           V2475]
 gi|61222668|sp|P0A5M4|DCDA_MYCTU RecName: Full=Diaminopimelate decarboxylase; Short=DAP
           decarboxylase
 gi|61222669|sp|P0A5M5|DCDA_MYCBO RecName: Full=Diaminopimelate decarboxylase; Short=DAP
           decarboxylase
 gi|1322417|emb|CAA97758.1| PROBABLE DIAMINOPIMELATE DECARBOXYLASE LYSA (DAP DECARBOXYLASE)
           [Mycobacterium tuberculosis H37Rv]
 gi|13880934|gb|AAK45594.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis CDC1551]
 gi|31618075|emb|CAD94186.1| PROBABLE DIAMINOPIMELATE DECARBOXYLASE LYSA (DAP DECARBOXYLASE)
           [Mycobacterium bovis AF2122/97]
 gi|121492869|emb|CAL71340.1| Probable diaminopimelate decarboxylase lysA [Mycobacterium bovis
           BCG str. Pasteur 1173P2]
 gi|124600610|gb|EAY59620.1| diaminopimelate decarboxylase lysA (dap decarboxylase)
           [Mycobacterium tuberculosis C]
 gi|134149704|gb|EBA41749.1| diaminopimelate decarboxylase lysA (dap decarboxylase)
           [Mycobacterium tuberculosis str. Haarlem]
 gi|148505233|gb|ABQ73042.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis H37Ra]
 gi|148721038|gb|ABR05663.1| diaminopimelate decarboxylase lysA (dap decarboxylase)
           [Mycobacterium tuberculosis F11]
 gi|224772810|dbj|BAH25616.1| putative diaminopimelate decarboxylase [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253321164|gb|ACT25767.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis KZN
           1435]
 gi|289415651|gb|EFD12891.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis T46]
 gi|289439549|gb|EFD22042.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis KZN
           605]
 gi|289538387|gb|EFD42965.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis K85]
 gi|289543057|gb|EFD46705.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis T17]
 gi|289685567|gb|EFD53055.1| diaminopimelate decarboxylase LysA [Mycobacterium tuberculosis
           02_1987]
 gi|289690433|gb|EFD57862.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis T92]
 gi|289693957|gb|EFD61386.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
           EAS054]
 gi|289708954|gb|EFD72970.1| diaminopimelate decarboxylase lysA (dap decarboxylase)
           [Mycobacterium tuberculosis GM 1503]
 gi|289712957|gb|EFD76969.1| diaminopimelate decarboxylase LysA [Mycobacterium tuberculosis T85]
 gi|298494591|gb|EFI29885.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis
           94_M4241A]
 gi|308350365|gb|EFP39216.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
           SUMu008]
 gi|308366490|gb|EFP55341.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
           SUMu012]
 gi|323720250|gb|EGB29349.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
           CDC1551A]
 gi|326902915|gb|EGE49848.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis
           W-148]
 gi|328459407|gb|AEB04830.1| diaminopimelate decarboxylase lysA [Mycobacterium tuberculosis KZN
           4207]
          Length = 447

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 53/406 (13%), Positives = 123/406 (30%), Gaps = 45/406 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ID+    +           +G  +  A K F    +   +++        +  E
Sbjct: 39  GTPLFVIDEDDFRSRCRETAAAF-GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGE 97

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F  E    +   K       AV +    I+ ++++++ +    A +    + 
Sbjct: 98  LAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQD 157

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G            +    ++   + GL  H   +
Sbjct: 158 VLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQ 217

Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F          +    G F  +    I  + LGGG+  +            L  
Sbjct: 218 IFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAA 277

Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS----- 264
                           + ++ +EPG AI    T     V  + +   +            
Sbjct: 278 KLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDG 337

Query: 265 -VEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318
            +  ++   L   +      +   +  P  A + G+ C +GDI     +    ++ GD +
Sbjct: 338 GMSDNIRTALYGAQYDVRLVSRVSDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLV 397

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +      Y  +  + +N +  P +   +       +R  + +D  +
Sbjct: 398 AVAATGAYCYSLSSRYNMVGRPAVVAVHAGNARLVLRRETVDDLLS 443


>gi|307717734|ref|YP_003873266.1| hypothetical protein STHERM_c00170 [Spirochaeta thermophila DSM
           6192]
 gi|306531459|gb|ADN00993.1| hypothetical protein STHERM_c00170 [Spirochaeta thermophila DSM
           6192]
          Length = 419

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 64/394 (16%), Positives = 117/394 (29%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP++L D++ +                G K   A+K      +   L +   G   SSL
Sbjct: 20  PTPFHLYDERGIRETARRLYEAFDWVPGGFKNFFAVKALPNPYILKILKEEGMGADCSSL 79

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E++L       GE   +                   I  + ++ +   +  A     + 
Sbjct: 80  PELVLAEKVGLSGEEIMFTSNNTPYWEYQKAWELGARINLDDITHIPYLE--AHVGIPEF 137

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKSF 172
                      K      +   S+ G   +        ++ +     GL         + 
Sbjct: 138 ICMRYNPGPLKKGNAIIGHPEESKYGFTREQIIEGYRLLKEKGAKRFGLHTMVVSNELNV 197

Query: 173 LCFSAMLKN----IEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK 224
             F    +     + +        IE+I+LGGGI    +       + +  +R+K   ++
Sbjct: 198 DYFEDTARLLFSLVAEVKEEVGVDIEFINLGGGIGIPYRPDQEAVDLYELSRRIKAAYDE 257

Query: 225 -------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
                  Y  QI +E G  +      L T  +      K  + VD+ +   +   +    
Sbjct: 258 MIVRRGLYPAQIVMENGRMVTGPHGFLITRAIHRKHTYKRFIGVDACMANLMRPGMYGAY 317

Query: 278 SATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                             V G  C   D F       P++ GD I   D   +       
Sbjct: 318 HHITVLGKEDVPPSEVYDVVGSLCENIDKFAIDRALPPIEPGDIIVIHDTGAHGHAMGFN 377

Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           +NG       +   DG+   IR   + +DY+  L
Sbjct: 378 YNGKLRSAEILLREDGSAVCIRRAETVDDYFATL 411


>gi|295112265|emb|CBL29015.1| diaminopimelate decarboxylase [Synergistetes bacterium SGP1]
          Length = 428

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 60/401 (14%), Positives = 114/401 (28%), Gaps = 39/401 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++D+  +             +  G     A K F    M   ++Q   G    SL
Sbjct: 19  GTPLYVLDEAVIRARCAEVRRDFLSRWPGTDACYASKAFVTRAMARIVDQEGLGLDVVSL 78

Query: 61  YEVMLGH-EKFGGETH-AYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F  E    +  A  + E+  A+      I+ +++ +L+   D A      
Sbjct: 79  GELRTALSAGFPPERIELHGNAKSEVELRTALEVGVGRIVVDSLMELDVLADLAEEMGPA 138

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK-DKIESEIKN--------VNGLMFHNN 166
                            L    R  S+ G   + D +   ++         + GL FH  
Sbjct: 139 GADPAARRAGGFRQHARLHRHGRVGSKFGLPLEGDLLFEAVRRGMARSGLDLLGLHFHVG 198

Query: 167 CENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            +             +L+   +       ++  ++ GGG                  +  
Sbjct: 199 SQLFEPDAHLRSLVRVLEAAAELRARLGFELRELNFGGGYGARSNPSESHVPIALFTDAM 258

Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPD 271
                              +E G  IV+        V  + E      +      A  P 
Sbjct: 259 MGALERECATRGLKRPVASIEAGRWIVSEAGITLYRVEVVKELPGLTYVAVDGGMADNPR 318

Query: 272 YLLY--------QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323
             LY         E      +       V GR C +GD+  E      ++ G+ ++  + 
Sbjct: 319 RPLYGAVYEAVSAERPDAVADRSGSRVSVVGRCCESGDVLIEDARLPALRRGEVLAVFNT 378

Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             Y  +  + +N +  P + +         +R  +  D   
Sbjct: 379 GAYTFSMASNYNRLCRPAVVLVRDGRADLIVRRETPEDLLA 419


>gi|319401317|gb|EFV89528.1| diaminopimelate decarboxylase [Staphylococcus epidermidis FRI909]
          Length = 421

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 56/394 (14%), Positives = 121/394 (30%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D+ ++ N +       + +G    +  A K F    M   +++        S 
Sbjct: 26  GTPSIVYDEDQIRNQIRRYHKAFEASGLSYNISYASKAFTCIQMVKLIDEENLQLDVVSE 85

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    E  F  +   ++   K          +     + +T+ +++     A   +  
Sbjct: 86  GELYTALEAGFDSKRIHFHGNNKTKREIQYALDNQIGYFVVDTLEEIDLIDKYADS-NVD 144

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168
           + LR+NP V           +  S+ G   K             ++   + G+ FH   +
Sbjct: 145 VVLRVNPGVEAHTHEFIQTGQEDSKFGLSIKHGLALNAVNKVKATKHLQLKGIHFHIGSQ 204

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ-----------R 217
            +         K +         ++  +++GGG      +       +            
Sbjct: 205 IEGTEAMIKTAKIVLNWLASERIEVSLLNIGGGFGIKYVEGDESFPIEQGISEITEAIKE 264

Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLY 275
             +  +    +I +EPG +IV         V  I +       V     +  H+   L  
Sbjct: 265 TAQALQYNIPEIGIEPGRSIVGEAGITLYEVGTIKDIPGVNKYVSVDGGMSDHIRTALYG 324

Query: 276 QESATI---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331
            +   +          +  + G+ C +GDI          V  GD ++      Y+ +  
Sbjct: 325 AQYEALLVNRNEKANESVTIAGKLCESGDIIVRDAQLPSSVHRGDYLAVLSTGAYHYSMA 384

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + +N +  P +         + I+  S      N
Sbjct: 385 SNYNQMQKPPVFFLKDGKAREVIKRQSLRQLIIN 418


>gi|260889906|ref|ZP_05901169.1| diaminopimelate decarboxylase [Leptotrichia hofstadii F0254]
 gi|260860512|gb|EEX75012.1| diaminopimelate decarboxylase [Leptotrichia hofstadii F0254]
          Length = 464

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 69/402 (17%), Positives = 131/402 (32%), Gaps = 40/402 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTL-NQYMDGTTSSS 59
           KTP Y++D++ +   +D      +      ++  A K F + GM   +  + +D     S
Sbjct: 58  KTPLYVMDQELIETTIDKMKEAFQSNRFDTQIAYAGKAFLSMGMLKLVDAKELD-LDVVS 116

Query: 60  LYEVMLG-HEKFGGET-HAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
             E+       F  +  H +      +    A+      I+ +   +++K +   ++  K
Sbjct: 117 GGELYTAYKAGFPMDRVHLHGNNKTVEELEMAIEFGIKEIVIDNEDEIDKIEKICREKGK 176

Query: 117 KIGLRINPSVS--YSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHN 165
           K  + +                +   S+ G            K   +SE     G   H 
Sbjct: 177 KQAVLVRIDPGIEAHTHHYIKTSGLTSKFGISLFQDNLFDIIKRLNDSEWIEFKGFHTHI 236

Query: 166 NCENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEF 221
             +      F   L  I K            +  +++GGG     K+       + +   
Sbjct: 237 GSQIFQSAFFIFALDEIFKYLDKLKKELGIVVHTVNMGGGFGVYYKEGDDPKPIEEVLSE 296

Query: 222 SEKYSVQI-----------YLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAH 268
              Y+  +            +EPG +IV N  T    V  I E +  K  V +D  +  +
Sbjct: 297 IITYTEAMEIKYQIGFKELCIEPGRSIVGNAGTTLYEVGGIKETVGGKTYVFIDGGMSDN 356

Query: 269 VPDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPV-KIGDRISFEDV 323
           +   L   E      N    T      + G+ C +GDI  E        +IGD ++    
Sbjct: 357 IRTALYQAEYEAGVVNKINDTDVREITLAGKLCESGDIIIEKGKLPKATEIGDIVAVTTT 416

Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
             Y     + +N +  P +          A++  + +D   N
Sbjct: 417 GAYCYTMSSNYNRMMRPAVVFVKDGKAKVAVKRETLDDLIRN 458


>gi|293375752|ref|ZP_06622023.1| diaminopimelate decarboxylase [Turicibacter sanguinis PC909]
 gi|292645621|gb|EFF63660.1| diaminopimelate decarboxylase [Turicibacter sanguinis PC909]
          Length = 430

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 60/399 (15%), Positives = 118/399 (29%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           +TP Y+ D+  L  N        K    G ++  A K F    M   + +        S 
Sbjct: 29  QTPLYVFDEALLRQNCKDYRKHFKVEERGNRVAYAGKAFLPLYMCHLIKEEGLYLDVVSG 88

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK--LH 115
            E+       F  +   ++   K  +   +         + +   +L        K    
Sbjct: 89  GELYTAYKADFPMDHVLFHGNNKTFDEINMGLEYGVGVFVVDNYYELETLNTMCHKRGKQ 148

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
           + + LRI P +           +  S+ G    +           + E  N+ GL  H  
Sbjct: 149 QNVYLRITPGIEAHTHDYIKTGQIDSKFGFTLSNGDLQRCLEVFHKYEHLNLIGLHAHIG 208

Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD--------- 213
            +             M+  ++     F  +I  + LGGG+     +              
Sbjct: 209 SQIFDVNPFLDEVEIMMTLVKDIKEQFGFEITDVDLGGGVGVYYTEKDAPKSIAQFCEAI 268

Query: 214 --FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               Q + E  +    ++ +EPG +IV N  +   TV  + +       V     +  ++
Sbjct: 269 LTKAQTVCETLQIDIPRLIIEPGRSIVANAGSTLYTVGSMKDIKDVRTYVSVDGGMTDNI 328

Query: 270 PDYLLYQESAT----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L              +       + G+ C +GDI         ++ GD +       
Sbjct: 329 RPSLYQAVYECAIANWMESGNERHVTIAGKCCESGDILITDVDVNKIESGDILIITSTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  + +N I    +            R  +Y +  +
Sbjct: 389 YGYSMSSNYNKIPKAAVVAVKDGEAQLICRRQTYEELLS 427


>gi|254386377|ref|ZP_05001683.1| diaminopimelate decarboxylase [Streptomyces sp. Mg1]
 gi|194345228|gb|EDX26194.1| diaminopimelate decarboxylase [Streptomyces sp. Mg1]
          Length = 444

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 64/397 (16%), Positives = 126/397 (31%), Gaps = 36/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+ ++     T           +L A K F +  M   +++   G    S  E
Sbjct: 46  DTPVYVLDEGEVRARCRTYRDAF--PDADVLYAAKAFLSRAMVRWVDEEGLGLDVCSAGE 103

Query: 63  VMLGH-EKFGGETHA-YNVAYKDCEIDAVLS-NCDTIIFNTVSQLNKFK-DKAQKLHKKI 118
           + L     F  E    +  A    +I+A L      I+ +  S++ +          +K+
Sbjct: 104 LELAVTAGFPPERMVLHGNAKSPHDIEAALRLGVGRIVIDGPSEIARLAAMVGTGGSQKV 163

Query: 119 GLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCEN 169
            +R+ P ++              + G               +      + GL  H   + 
Sbjct: 164 MVRVVPGITVGGHEKIRTGTDGQKFGLSLTDGSAQHAIARVLGQPQLELTGLHCHIGSQI 223

Query: 170 KSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEF 221
                +      M+  + +        +  + +GGG             +    +RL+  
Sbjct: 224 TDVKPYLAAVRRMVGLMARVRDAHGVVLPELDMGGGHGIAYRPGEPALDLTALARRLRTA 283

Query: 222 SEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYL 273
             +          ++ +EPG A+          VL +     +  V VD  +  +    L
Sbjct: 284 LVESCAAAGLAVPRLTIEPGRAVAGPAGVALYRVLAVKRTGDRVFVAVDGGMSDNPRPAL 343

Query: 274 LYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNI 328
                A       P      A V GR C AGDI          V+ GD ++      Y +
Sbjct: 344 YGVRYAPRLVGRRPAAQACVATVVGRHCEAGDILAADVELPGDVRPGDLLAVPVAGAYQL 403

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           +  + +N +  P +   +       +R  +  D+ + 
Sbjct: 404 SMASGYNLVGRPPVVAVDNGVARLLMRRETLADFRSR 440


>gi|294012853|ref|YP_003546313.1| diaminopimelate decarboxylase [Sphingobium japonicum UT26S]
 gi|292676183|dbj|BAI97701.1| diaminopimelate decarboxylase [Sphingobium japonicum UT26S]
          Length = 426

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 60/387 (15%), Positives = 114/387 (29%), Gaps = 24/387 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           + TP Y+     L  ++              +  A+K      +  TL +   G    S 
Sbjct: 25  VGTPVYIYSTATLTRHVAVFREGLSQIHDPLIAFAVKANPNAAVLATLAKLGLGADVVSA 84

Query: 61  YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK- 116
            E++         E   ++   K  D    A+          +  +     + A  + + 
Sbjct: 85  GELLRAIAAGIPAERIVFSGVGKTADEMRIALEQGIYQFNLESEPEAEMLSEVALSMGRK 144

Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCE 168
             +  RINP V           +  ++ G      + S          +V G+  H   +
Sbjct: 145 APVAYRINPDVDAGTHAKISTGKSENKFGIPYDRALASYAAARDLPGLDVQGVAVHIGSQ 204

Query: 169 NKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKE 220
                        +  + +        I    LGGG+               D+   +  
Sbjct: 205 LTDLTPLEAAFIKVGALIERLRAEGHDIRTADLGGGLGVPYDPSQPLPPSPADYGAMVTR 264

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESA 279
            ++ ++V++  EPG  IV N   L + V+ + +      VIVD+++   +   L      
Sbjct: 265 ITQGWNVRLMFEPGRLIVGNAGVLLSQVVRVKQGAQAPFVIVDAAMNDLLRPSLYDAWHD 324

Query: 280 TIYPNTGPYTA--MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
               +     A   V G  C  GD F        V  GD ++F     Y     + +N  
Sbjct: 325 IRAVHPKGERAAANVVGPVCETGDTFAMHRDMDVVGAGDLVAFMTAGAYGATMASTYNSR 384

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
            +    + + D                
Sbjct: 385 ALTPEVLVSGDKWAVVRARPPIEALIE 411


>gi|57866856|ref|YP_188548.1| diaminopimelate decarboxylase [Staphylococcus epidermidis RP62A]
 gi|242242677|ref|ZP_04797122.1| diaminopimelate decarboxylase [Staphylococcus epidermidis W23144]
 gi|57637514|gb|AAW54302.1| diaminopimelate decarboxylase [Staphylococcus epidermidis RP62A]
 gi|242233813|gb|EES36125.1| diaminopimelate decarboxylase [Staphylococcus epidermidis W23144]
          Length = 421

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 56/394 (14%), Positives = 122/394 (30%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D+ ++ N +       + +G    +  A K F    M   +++        S 
Sbjct: 26  GTPSIVYDEDQIRNQIRRYHKAFEASGLSYNISYASKAFTCIQMVKLIDEENLQLDVVSE 85

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    E  F  +   ++   K          +     + +T+ +++     A   +  
Sbjct: 86  GELYTALEAGFDSKRIHFHGNNKTKREIQYALDNQIGYFVVDTLEEIDLIDKYADS-NVD 144

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168
           + LR+NP V           +  S+ G   K             ++   + G+ FH   +
Sbjct: 145 VVLRVNPGVEAHTHEFIQTGQEDSKFGLSIKHGLALNAVNKVKATKHLQLKGIHFHIGSQ 204

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ-----------R 217
            +         K +         ++  +++GGG      +       +            
Sbjct: 205 IEGTEAMIKTAKIVLNWLASERIEVSLLNIGGGFGIKYVEGDESFPIEQGISEITEAIKE 264

Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLY 275
             +  +    +I +EPG +IV         V  I +       V     +  H+   L  
Sbjct: 265 TAQALQYNIPEIGIEPGRSIVGEAGITLYEVGTIKDIPGVNKYVSVDGGMSDHIRTALYG 324

Query: 276 QESATI---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331
            +   +          +  + G+ C +GDI          V  GD ++      Y+ +  
Sbjct: 325 AQYEALLVNRNEKANESVTIAGKLCESGDIIVRDAQLPSSVHRGDYLAVLSTGAYHYSMA 384

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + +N +  P++         + I+  S      N
Sbjct: 385 SNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 418


>gi|110667471|ref|YP_657282.1| diaminopimelate decarboxylase [Haloquadratum walsbyi DSM 16790]
 gi|109625218|emb|CAJ51638.1| diaminopimelate decarboxylase [Haloquadratum walsbyi DSM 16790]
          Length = 464

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 58/386 (15%), Positives = 119/386 (30%), Gaps = 31/386 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP Y+ID Q++  N    L         +  A+K  +   +   +         +S  E
Sbjct: 38  ETPLYVIDAQRVRENCARLLDAF--PAATIRYAIKAHSGQAVLKVIRDAGIDVECASAGE 95

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD------TIIFNTVSQLNKFKDKAQKLH 115
           V       F G    Y            + N        TI       + + +++     
Sbjct: 96  VKAALAAGFNGNRIQYTAVNPPARDLDAIINWWQENKQLTITVGAADTVERLQER--GFD 153

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-----IESEIKNVNGLMFHNNCENK 170
            ++ +R+NP+V              ++ G   +         +   ++ G+  H      
Sbjct: 154 GRLCIRVNPNVGAGHHEKV-TTGANAKFGIPYERVSELATQWATEFDLVGIHAHAGSGIS 212

Query: 171 -----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEF 221
                S       +  + +        +E++ +GGG             +    +R ++ 
Sbjct: 213 GEDLSSHEELVRRMGTLARTITECAGSLEFVDVGGGFGVPYRANDPPLDIHTVAERTRDA 272

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESAT 280
                  + +EPG  +V +   L T V  I    +  V+ VD+ +   +   +       
Sbjct: 273 LGTVDATLAIEPGRYVVADAGVLLTRVNTIKSARETTVVGVDAGMTTLLRPAMYDAYHEI 332

Query: 281 IYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
              +  P        + G  C + DIF E         GD I+      Y     + +N 
Sbjct: 333 ENISASPTTDSMPVTIAGPICESSDIFAEGRSISAPTRGDIIAIGTAGAYGYEMASTYNA 392

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDY 362
              P   + + +    A R  + ++ 
Sbjct: 393 RPRPAEVIYDDNTAKVARRRETRDEL 418


>gi|301167407|emb|CBW26989.1| putative diaminopimelate decarboxylase [Bacteriovorax marinus SJ]
          Length = 409

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 75/384 (19%), Positives = 130/384 (33%), Gaps = 33/384 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVK---LLLALKCFAAWGMFDTLNQYMDGTTSS 58
           +KTP+YL   + L  N +      ++ G+K   +  ALK  +   +  TL     G    
Sbjct: 30  LKTPFYLYSLEALQRNFENFKTEAQSNGLKNPLICYALKANSNIRLLKTLKSLGAGADIV 89

Query: 59  SLYEVMLGH-EKFGGETHAYNVAYKDCEIDA-----VLSNCDTIIFNTVSQLNKFKDKAQ 112
           S  E+      K   +   ++   K+                +    ++ +L      AQ
Sbjct: 90  SGGELKQALKAKIPAQKIVFSGVGKNESEIELALTCHPEGIYSFNVESIEELEMISSIAQ 149

Query: 113 KLHKKIG--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMF 163
           +L+K     LR+NP V+              + G   +D  ++ +K        + GL  
Sbjct: 150 RLNKTARVALRLNPQVNVKTHKHISTGGKSHKFGILKRDIEQALLKKKLWKSVSLVGLSM 209

Query: 164 HNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP-------VKDFCQ 216
           H   +          L  + +       Q+E+I +GGG+     +           +   
Sbjct: 210 HIGSQLTCLKATRKALIELCRLCNSCN-QLEFIDVGGGLGVPYNEDHPLSTLSEYMELIA 268

Query: 217 RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVL-DISENIKNLVIVDSSVEAHVPDYLLY 275
           ++ +   K  ++I  EPG  I  N   L T V+   S      +IVD  +   V   L  
Sbjct: 269 KITQRELKEELRIVFEPGRYIAANCGVLITEVIRSKSSEENKFIIVDGGMNDFVRSSLYG 328

Query: 276 QESATIYPNTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                +     P    T  V G  C   D F        +K  DRI   DV  Y  +  +
Sbjct: 329 AYHHVLPLKKRPSKLSTCHVVGPICETADSFASNRELPLLKAKDRICIADVGAYGSSMGS 388

Query: 333 WFNGINMPTIAVKNVDGTIKAIRE 356
            +N        + ++ G    +R 
Sbjct: 389 TYNMREKTREYIIDLKGE---VRR 409


>gi|332187942|ref|ZP_08389675.1| diaminopimelate decarboxylase [Sphingomonas sp. S17]
 gi|332012103|gb|EGI54175.1| diaminopimelate decarboxylase [Sphingomonas sp. S17]
          Length = 420

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 62/375 (16%), Positives = 111/375 (29%), Gaps = 23/375 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALY-IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           + TP Y+        +       +     V L  A+K      +   L     G    S+
Sbjct: 25  VGTPVYIYSASTFRRHAQVFREGLSALPRVHLAYAIKANPNLAVLRVLADEGYGADVVSV 84

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115
            E+          E   ++   K       A+ +           +     + A +  L 
Sbjct: 85  GEMRRALAAGMKAEDIVFSGVGKTRAELIAALEAGIGQFNLELEEEGAVLAELAHERGLV 144

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCE 168
               LR+NP V           R  ++ G      +    +       ++ G+  H   +
Sbjct: 145 APATLRVNPDVDAGTHAKISTGRKENKFGVPIDQALGMFDRLAGLPGIDLKGVACHIGSQ 204

Query: 169 NKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKD----FCQRLKEF 221
                   A  K + +          ++  + LGGG+    K   V      + + +   
Sbjct: 205 LGDLAPLEAAYKRVGELVAELRGAGHRVTRVDLGGGLGVPYKPGDVMPAPAAYGEMVARV 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
           ++ + V++  EPG  I  N   L T V+ +        VIVD+++       L       
Sbjct: 265 TKDWDVELMFEPGRVIAGNAGVLATEVVWVKPGVANPYVIVDAAMNDLARPALYDAYHDF 324

Query: 281 IYPNTGPYTAM--VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
           +       T M  + G  C  GD F        VK GD   F     Y     + +N   
Sbjct: 325 VAVKPTGETMMANIAGPVCETGDTFAMNREIDVVKSGDLAVFRTAGAYGATMASTYNSRP 384

Query: 339 MPTIAVKNVDGTIKA 353
           +    +   D     
Sbjct: 385 LVPEVMVEGDRFAVV 399


>gi|187921716|ref|YP_001890748.1| diaminopimelate decarboxylase [Burkholderia phytofirmans PsJN]
 gi|187720154|gb|ACD21377.1| diaminopimelate decarboxylase [Burkholderia phytofirmans PsJN]
          Length = 413

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 58/399 (14%), Positives = 114/399 (28%), Gaps = 44/399 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   +   +             +  A K  +   +   +        + SL E
Sbjct: 16  GTPLWVYDADTIRRRIAELRSFDV-----IRYAQKACSNLHILKLMRDEGAMVDAVSLGE 70

Query: 63  VMLGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
           +              E   +     D    A +      +   ++  L +    A +   
Sbjct: 71  IKRSLAAGFKPDGDPEGVVFTADLIDHATLATVIEHRITVNAGSLDMLEQIGRHAPE-GH 129

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170
           ++ LRINP   +      +     S+ G    D       +      + GL  H      
Sbjct: 130 RVWLRINPGFGHGHSNKTNTGGEHSKHGIWLDDVPRAVELVRRYRLKLVGLHMHIGSGVD 189

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-KDYPVKDFCQRLKEF-------- 221
            +   S + + + +        IE IS GGG+     +  P  D     + +        
Sbjct: 190 -YGHLSRVCEAMVEAVKGLGHDIEAISAGGGLSVPYREGEPDIDVAHYFRLWDAARRQIE 248

Query: 222 -SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESA 279
               + V++ +EPG  +V  +  L   V  ++        + D+     V          
Sbjct: 249 THVGHRVRLEIEPGRFLVAQSGVLVAEVHALNRRPAQQFALLDAGFNDLVRPSFYGSHHE 308

Query: 280 TIYPNTGPY-------TAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAG 325
                           +  V G  C AGD+F                ++GD I F D   
Sbjct: 309 MTVLRRDGALSEAPIDSFAVAGPLCEAGDVFTQAESGVITNRSIHTPEVGDFIVFHDAGA 368

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  + +N   +    + +        R  + ++   
Sbjct: 369 YGASMSSNYNSRPLAPEVLLDHGKPRLIRRRQTIDELLA 407


>gi|33865470|ref|NP_897029.1| diaminopimelate decarboxylase [Synechococcus sp. WH 8102]
 gi|33632639|emb|CAE07451.1| diaminopimelate decarboxylase [Synechococcus sp. WH 8102]
          Length = 459

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 51/396 (12%), Positives = 110/396 (27%), Gaps = 34/396 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP Y++D+  +           K         + A K  ++  +         G  + S
Sbjct: 52  GTPLYVLDEDTVRGTCRAYRDALKQHYPGPSLPIYASKANSSLLVSSIAASEGLGLDAVS 111

Query: 60  LYEVMLGHEK-FGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLH 115
             E++   +    GE    +     D E+    +N  TI+ +    L +  +   A    
Sbjct: 112 AGELLTAFQGGMPGERMVLHGNNKNDEELLLAYNNDVTIVVDNQHDLERLAELVPAGGAP 171

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE 168
            ++ LR  P +              S+ G          +  +      + GL  H   +
Sbjct: 172 ARLMLRFTPGIECHTHEYIQTGHLDSKFGFDPDLLESVLRQLVGKPWAKLTGLHAHIGSQ 231

Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK- 224
                    +   +             +E +++GGG+             ++  +     
Sbjct: 232 IFELEPHRDLAAVMADALKLARSLGHPVEDLNVGGGLGIRYVASDDPPTIEQWVKVVADA 291

Query: 225 ----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDY 272
                        ++  EPG ++V         V              +D  +  +    
Sbjct: 292 VTAACRDRQLELPRLLCEPGRSLVATAGVTLYAVGSRKTIPGVRTYVAIDGGMSDNPRPI 351

Query: 273 LLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
                      +        T  + G+ C +GD+  +       + GD ++      YN 
Sbjct: 352 TYQSLYTCCLADRPLAPAEETVNLVGKHCESGDVLLKDLPLPTTQSGDIVAVFATGAYNA 411

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +  + +N I  P   V     +    +    +D   
Sbjct: 412 SMSSNYNRIPRPAAVVVQSGSSELFQKREQPDDLLR 447


>gi|85373232|ref|YP_457294.1| diaminopimelate decarboxylase [Erythrobacter litoralis HTCC2594]
 gi|84786315|gb|ABC62497.1| diaminopimelate decarboxylase [Erythrobacter litoralis HTCC2594]
          Length = 420

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 56/376 (14%), Positives = 108/376 (28%), Gaps = 24/376 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           + TP Y+  +  L  +               +  A+K      +   L +   G    S 
Sbjct: 25  VGTPVYVYSRATLERHARVFTEGLAEVPDKLIAFAVKSNPNLAVLKVLQKAGFGADVVSG 84

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK- 116
            E+              ++   K      +            +  +  +  + A    + 
Sbjct: 85  GELRRALAAGMAPAKIVFSGVGKTRAELMLGLDEGIGQFNIESREEGRELAELAAARGEL 144

Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCE 168
               LRINP V           +  ++ G           + ++ +  ++ G+  H   +
Sbjct: 145 APACLRINPDVDAKTHEKISTGKAENKFGIPLVHAREVFAELVQLDGLHLRGIAVHIGSQ 204

Query: 169 NKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEF 221
                        +     +       I  + LGGG+        +     D+   +   
Sbjct: 205 LGDLEPLETAFGKVGKLVADLREAGHLITHVDLGGGLGVPYKAGEEFPSPADYGAMVARV 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE--NIKNLVIVDSSVEAHVPDYLLYQESA 279
           +  + V +  EPG  I  N   L T V+ +    N    VIVD+++       L      
Sbjct: 265 TRDWRVHLTFEPGRVIAGNAGILLTRVIRVKRGGNGPPFVIVDAAMNDLARPALYGAWHD 324

Query: 280 T--IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
              + P+    TA + G  C  GD F        ++ GD   F     Y     + +N  
Sbjct: 325 FDAVEPSGEHMTANIVGPICETGDTFARDRKCDALQSGDLAVFRTAGAYGATMASSYNSR 384

Query: 338 NMPTIAVKNVDGTIKA 353
                 + + D     
Sbjct: 385 GFVAEVLVDGDQFAVV 400


>gi|297559297|ref|YP_003678271.1| diaminopimelate decarboxylase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296843745|gb|ADH65765.1| diaminopimelate decarboxylase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 461

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 50/398 (12%), Positives = 115/398 (28%), Gaps = 38/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +++D++               +   +  A K      +   +N+        S  E
Sbjct: 62  GTPLFVMDEEDFRGRARDYRTAF--SDADVYYAGKALLTKAVARWVNEEGLKLDVCSGGE 119

Query: 63  VMLGHE-KFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +        E    +   K       AV +    +I +++ ++ +    A +L    K
Sbjct: 120 LTVALAAGVPAERIGMHGNNKSAAELRRAVEAGVGRVIIDSLDEIERLGAIAAELGARPK 179

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G         E  +  + +    + GL  H   +
Sbjct: 180 VLIRVTTGVEAHTHEFVATAHDDQKFGFAMSTGAAAEAVRRVLAAPHLELVGLHSHIGSQ 239

Query: 169 NKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F    + + +            +  + LGGG+             + +      
Sbjct: 240 IFDTSGFEVAARRVTRFLTGVHEELGVTLAELDLGGGLGIAYTSGDDPLDPKTIAGSLTS 299

Query: 225 YSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271
              +             +EPG AI          V  + +       V     +  ++  
Sbjct: 300 IVRRECEEAGLPVPRIAVEPGRAIAGPAGITVYEVGTVKDVEGIRTYVSVDGGMSDNIRT 359

Query: 272 YLLYQESATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326
            L   E  +       +  P  + + G+ C +GDI     +    ++ GD ++      Y
Sbjct: 360 ALYGSEYTSQLVSRESDAEPMLSRLVGKHCESGDIIVHDLYLPADLRPGDLVAVAATGAY 419

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N +  P +       +   +R  +  D   
Sbjct: 420 CYSMASNYNHLPRPAMVAVRGGSSRVIVRRENEEDLLR 457


>gi|166031743|ref|ZP_02234572.1| hypothetical protein DORFOR_01443 [Dorea formicigenerans ATCC
           27755]
 gi|166028196|gb|EDR46953.1| hypothetical protein DORFOR_01443 [Dorea formicigenerans ATCC
           27755]
          Length = 423

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 61/391 (15%), Positives = 125/391 (31%), Gaps = 29/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +  N+         N G K   A+K      + D L +Y  G   SS  
Sbjct: 20  PTPFHLYDEKGIRKNMQALKEAFAWNPGYKEYFAVKATPNPFLIDILREYGCGCDCSSYT 79

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E++L       GE   ++      E  +        I  + ++ ++  ++   ++ + I 
Sbjct: 80  ELLLSDAMGVKGEDIMFSSNDTPREEYELAHKLGAIINLDDITHIDFLEETIGEIPETIS 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN---- 169
            R NP   +        N   ++ G   +        ++S+     G+            
Sbjct: 140 CRYNPGGLFKISNDIMDNPGDAKFGMTTEQLFEAFKILKSKGAKEFGIHAFLASNTVTNE 199

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
              +    + +   K        I++I+L GGI          +  + + +   +   ++
Sbjct: 200 YYPMLAKVLFEVAVKLQKEVGIHIKFINLSGGIGIPYTPDQEPNDIRAIGDGVREVYNEV 259

Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                      Y E G  ++     L T  +      K  + VD+     +   +     
Sbjct: 260 LVPAGMGDVALYTELGRFMLGPYGCLVTKAIHEKHTHKEYIGVDACAVNLMRPAMYGAYH 319

Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        + +GD +   D   +  +    +
Sbjct: 320 HITVMGKEDVPCDHKYDVTGSLCENNDKFAIDRMLPKIDMGDVLMIHDTGAHGFSMGYNY 379

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   DG+ + IR   +  DY+ 
Sbjct: 380 NGKLKSAEVLLKEDGSTQLIRRAETPADYFA 410


>gi|294673237|ref|YP_003573853.1| diaminopimelate decarboxylase [Prevotella ruminicola 23]
 gi|294472253|gb|ADE81642.1| diaminopimelate decarboxylase [Prevotella ruminicola 23]
          Length = 386

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 76/372 (20%), Positives = 131/372 (35%), Gaps = 26/372 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTAL-YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           I+TP+Y  D   L   L T      K+ G  +  A+K  A   +   + +   G    S 
Sbjct: 14  IETPFYYYDTVLLRQTLQTINSEASKHEGFVVHYAVKANANPRILRIIREAGLGADCVSG 73

Query: 61  YEVML-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHKK 117
            EV       F  E   Y    K      +  + D   FN  ++ +L    + A +  K 
Sbjct: 74  GEVEASIKAGFPKEKIVYAGVGKSDWEIKLGLDNDIFCFNVESIPELEVINELAAQKGKV 133

Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE 168
                R+NP+V              ++ G          ++  + E     GL FH   +
Sbjct: 134 ARVAFRLNPNVGAHTHANITTGLAENKFGIAMGDMVKVIREAEKMENVKFVGLHFHIGSQ 193

Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFS 222
                 F      +  +++E      ++E I++GGG+          P+ DF      ++
Sbjct: 194 ILDMGDFEALCNRVNELQQELISHRIRVEHINVGGGLGIDYAHPNRVPIPDFKAYFDTYA 253

Query: 223 EKYS----VQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL--Y 275
           +K        ++ E G A+V    +L T  L I E  +K   IVD+     +   L   Y
Sbjct: 254 KKLKLQPGQTLHFELGRAVVAQCGSLITRTLYIKEGAVKKFAIVDAGFTDLIRPALYQAY 313

Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
            +   I  +  P    V G  C + D+F +       K GD ++      Y     + +N
Sbjct: 314 HKIENITSDEAPEAYDVVGPICESTDVFAKQIDLNKAKRGDLLAIRSAGAYGEIMASQYN 373

Query: 336 GINMPTIAVKNV 347
              +P   + + 
Sbjct: 374 CRRLPKGYMSDE 385


>gi|319948887|ref|ZP_08022999.1| diaminopimelate decarboxylase [Dietzia cinnamea P4]
 gi|319437446|gb|EFV92454.1| diaminopimelate decarboxylase [Dietzia cinnamea P4]
          Length = 472

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 56/404 (13%), Positives = 121/404 (29%), Gaps = 45/404 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ID+    +           A  ++  A K F        + +       +S  E
Sbjct: 63  GTPLFVIDEDDFRSRCREMADAFGGAE-RVHYASKAFLTTETARWVAEEGLSLDVASGGE 121

Query: 63  VMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117
           + +     F  E    +   K  D    AV S    ++ + +S++      A++  + + 
Sbjct: 122 LAIALRAGFPPERITVHGNNKSADELRYAVRSGVAHVVIDAMSEIELLDRIAREEGVVQD 181

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G         E  +    +    + GL  H   +
Sbjct: 182 VFIRVTVGVEAHTHEFIATAHEDQKFGFSLAGGAAMEAVRAVFAASHIRLTGLHSHIGSQ 241

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQ--------IEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F    + +       + +        ++ + LGGG+  +           RL  
Sbjct: 242 IFDIDGFELAARRVIGLLRDIVDEFGTERTAQLDHLDLGGGLGISYVPSDDPPPVARLAA 301

Query: 221 FSEK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDS 263
              +               + +EPG AI    T     V  + +        +  + VD 
Sbjct: 302 SLREIVEGFARDAGLTPPTLVVEPGRAIAGPGTVTVYEVGVVKDVDLAGGEQRRYISVDG 361

Query: 264 SVEAHVP----DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318
            +  ++     D +             P  + + G+ C +GD+     +       GD +
Sbjct: 362 GMSDNIRTALYDAVYDARLVGRASGAEPVVSRLVGKHCESGDVVVRDLWMPEDAGPGDLV 421

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
           +      Y  +  + +N I  P +           +R  + +D 
Sbjct: 422 AVAATGAYCYSMSSRYNLIGRPAVVAVRDGRARLMLRRETLDDL 465


>gi|315187350|gb|EFU21106.1| diaminopimelate decarboxylase [Spirochaeta thermophila DSM 6578]
          Length = 419

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 62/394 (15%), Positives = 118/394 (29%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP++L D++ +                G K   A+K      +   L +   G   SSL
Sbjct: 20  PTPFHLYDERGIRETARRLYEAFDWVPGGFKNFFAVKALPNPYILKILKEEGMGADCSSL 79

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E++L       GE   +                   I  + ++ ++  +  A     + 
Sbjct: 80  PELVLAEKVGLSGEEIMFTSNNTPYWEYQKAWDLGARINLDDITHISYLE--AHVGIPEF 137

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKSF 172
                      K      +   S+ G   +        ++ +     GL         + 
Sbjct: 138 ICMRYNPGPLKKGNAIIGHPEESKYGFTREQIIEGYRLLKEKGAKRFGLHTMVVSNELNV 197

Query: 173 LCFSAMLKN----IEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK 224
             F    +     + +        IE+I++GGGI    +       + +  +R+K   ++
Sbjct: 198 DYFEDTARLLFSLVAEVKEEVGVDIEFINMGGGIGIPYRPDQEAVDLYELSRRIKAAYDE 257

Query: 225 -------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
                  Y  +I +E G  +      L T  +      K  + VD+ +   +   +    
Sbjct: 258 MIVRRGLYPARIVMENGRMVTGPHGFLITRAIHRKHTYKRFIGVDACMANLMRPGMYGAY 317

Query: 278 SATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                             V G  C   D F       P++ GD I   D   +       
Sbjct: 318 HHITVLGKEDVPPSDVYDVVGSLCENIDKFAIDRALPPIEPGDIIVIHDTGAHGHAMGFN 377

Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           +NG       +   DG+   IR   + +DY+  L
Sbjct: 378 YNGKLRSAEILLREDGSAVCIRRAETVDDYFATL 411


>gi|291302993|ref|YP_003514271.1| diaminopimelate decarboxylase [Stackebrandtia nassauensis DSM
           44728]
 gi|290572213|gb|ADD45178.1| diaminopimelate decarboxylase [Stackebrandtia nassauensis DSM
           44728]
          Length = 468

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 63/402 (15%), Positives = 123/402 (30%), Gaps = 40/402 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            T  Y++D+    + L               +  A K F    +   + +        + 
Sbjct: 63  GTAAYVVDEADFRSRLRDFRGSFSANFPDGAVYYAGKSFLCKAVARWVAEEGVNLDICTG 122

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F GE  A++   K     A        TI+ ++  ++ +    A++   +
Sbjct: 123 GELATAVAAGFPGERLAFHGNNKSEAELAAALDAGVGTIVLDSRIEVERLTRLAKQRGVR 182

Query: 118 IGLRINP--SVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCE 168
            G+ +     V               + G   +  +++          ++ GL  H   +
Sbjct: 183 PGVMVRTKVGVEAHTHEYIATAHEDQKFGLSLEAAVKAAKHILAADVLHLKGLHSHIGSQ 242

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F      ++   E+        +  + LGGG              ++L +   K
Sbjct: 243 IFETTAFEVAARRVIGAHEQIQRETGKTLPELGLGGGFGIAYTTQDDPQSPRQLADGLRK 302

Query: 225 YSVQIY-----------LEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDSSVEA 267
                            +EPG AI   TT     V  +         +++ V VD  +  
Sbjct: 303 IVDHECDNLGIDIPSITVEPGRAISGPTTFTLYEVGTVKSVDLGAGRVRSYVSVDGGMSD 362

Query: 268 HVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFED 322
           ++   +         A+   +  P    V G+ C AGDI     F    +K GD I+   
Sbjct: 363 NIRTAMYGATYSVTLASRLSDAPPILGRVVGKHCEAGDIIVRDEFLPGDIKPGDLIAVPG 422

Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              Y  +  + +N +  P +           +R  S +D  N
Sbjct: 423 TGAYCRSMASNYNHVPRPPVVAVADGTARLIVRGESVDDLLN 464


>gi|296284457|ref|ZP_06862455.1| diaminopimelate decarboxylase [Citromicrobium bathyomarinum JL354]
          Length = 419

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 58/375 (15%), Positives = 106/375 (28%), Gaps = 23/375 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIR-KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           + TP Y+  +  L  +         +     +L A+K      +   L +   G    S 
Sbjct: 25  VGTPVYVYSRATLERHARVFREGLGELDNPLILFAVKANPNLAVLRVLQREGFGADVVSG 84

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKA--QKLH 115
            E+          +   ++   K      +  +         +  +  +  + A  +   
Sbjct: 85  GELRRALAAGMTPDKIVFSGVGKTRAELELGLDTGIAQFNIESREEGRELAELAAARGEK 144

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCE 168
            +  LRINP V           +  ++ G       E+  +        + GL  H   +
Sbjct: 145 ARCALRINPDVDAGTHEKISTGKADNKFGVPLHHAAEAFAELGALPGLALEGLAIHIGSQ 204

Query: 169 NKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEF 221
                        I     +       I  + LGGG+              D+   +   
Sbjct: 205 LADLAPLETAFGKIGTLLGQLREAGHTITRVDLGGGLGVPYRTGESFPSPADYGAMVARV 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQES-- 278
           +  + VQ+  EPG  I  N   L T V+ +        VIVD+++       L       
Sbjct: 265 TRDWGVQLVFEPGRVIAGNAGVLLTRVVRVKRGLNNPFVIVDAAMNDLARPALYGAWHDF 324

Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
             +       TA + G  C  GD F        +  GD   F     Y     + +N   
Sbjct: 325 EPVAQTEERMTANIVGPICETGDTFATNRDCPALVAGDLAVFRTAGAYGATMASSYNSRG 384

Query: 339 MPTIAVKNVDGTIKA 353
                + +       
Sbjct: 385 FVPEVLVSGSDYAVV 399


>gi|251810828|ref|ZP_04825301.1| diaminopimelate decarboxylase [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282876164|ref|ZP_06285031.1| diaminopimelate decarboxylase [Staphylococcus epidermidis SK135]
 gi|251805663|gb|EES58320.1| diaminopimelate decarboxylase [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281295189|gb|EFA87716.1| diaminopimelate decarboxylase [Staphylococcus epidermidis SK135]
 gi|329732907|gb|EGG69252.1| diaminopimelate decarboxylase [Staphylococcus epidermidis VCU028]
          Length = 421

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 57/394 (14%), Positives = 121/394 (30%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D+ ++ N +       + +G    +  A K F    M   +++        S 
Sbjct: 26  GTPSIVYDEDQIRNQIRRYHKAFEASGLSYNISYASKAFTCIQMVKLIDEENLQLDVVSE 85

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    E  F  +   ++   K          S     + +T+ +++     A   +  
Sbjct: 86  GELYTALEAGFDSKRIHFHGNNKTKREIQYALDSQIGYFVVDTLEEIDLIDKYADS-NVD 144

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168
           + LR+NP V           +  S+ G   K             ++   + G+ FH   +
Sbjct: 145 VVLRVNPGVEAHTHEFIQTGQEDSKFGLSIKHGLALNAVNKVKATKHLQLKGIHFHIGSQ 204

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ-----------R 217
            +         K +         ++  +++GGG      +       +            
Sbjct: 205 IEGTEAMIKTAKIVLNWLASERIEVSLLNIGGGFGIKYVEGDESFPIEQGISEITEAIKE 264

Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLY 275
             +  +    +I +EPG +IV         V  I +       V     +  H+   L  
Sbjct: 265 TAQALQYNIPEIGIEPGRSIVGEAGITLYEVGTIKDIPGVNKYVSVDGGMSDHIRTALYG 324

Query: 276 QESATI---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331
            +   +          +  + G+ C +GDI          V  GD ++      Y+ +  
Sbjct: 325 AQYEALLVNRNEKANESVTIAGKLCESGDIIVRDAQLPSSVHRGDYLAVLSTGAYHYSMA 384

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + +N +  P +         + I+  S      N
Sbjct: 385 SNYNQMQKPPVFFLKDGKAREVIKRQSLRQLIIN 418


>gi|160943971|ref|ZP_02091201.1| hypothetical protein FAEPRAM212_01472 [Faecalibacterium prausnitzii
           M21/2]
 gi|158444647|gb|EDP21651.1| hypothetical protein FAEPRAM212_01472 [Faecalibacterium prausnitzii
           M21/2]
 gi|295104795|emb|CBL02339.1| Diaminopimelate decarboxylase [Faecalibacterium prausnitzii SL3/3]
          Length = 428

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 63/399 (15%), Positives = 119/399 (29%), Gaps = 35/399 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           + TP+++ D++ +  N+         N G K   A+K      +   L +   G   SSL
Sbjct: 19  VPTPFHVYDEKGIRENVRRINKAFSWNKGFKEYFAVKALPNPVILQILKEEGCGVDCSSL 78

Query: 61  YEVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH--- 115
            E+ML     F G    ++       ++         I  +  + +   +  A       
Sbjct: 79  TELMLSEACGFTGHEIMFSSNQTPVEDMQKAYELGAYINLDDATMVEFLERVAGVPQEIF 138

Query: 116 --KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNC 167
                G       S   F + D     ++ G   +  I+S  K +       G+      
Sbjct: 139 CRYNPGGTFQLGESEEGFQVMDKPG-DAKYGMTEQQMIDSYKKLMQKGAKQFGIHAFLAS 197

Query: 168 EN----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223
                         + +   +        I +I+L GG+    +    ++    + E   
Sbjct: 198 NTISDAYYPELAGILFQLAVRVQQATGAHISYINLSGGVGIPYRPEQTENDIMAIGEGVR 257

Query: 224 KYSVQI-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY 272
           K   +I           + E G         L +TV+      K  + +D+     +   
Sbjct: 258 KKFEEILVPAGMGDVAIFSEMGRFTTGPYGALVSTVIHEKHIYKEYIGLDACAANLMRPA 317

Query: 273 LLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
           +                  +   V G  C   D F        + IGD +   D   +  
Sbjct: 318 MYGAYHHITVLGKENEPCDHKYDVVGGLCENNDKFAVDRMLPKIDIGDILYIHDTGAHGS 377

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                +NG       +   DG+ + IR   +  DY+  L
Sbjct: 378 AMGYNYNGKLHCAEVLLCEDGSHRLIRRAQTPRDYFATL 416


>gi|45358763|ref|NP_988320.1| diaminopimelate decarboxylase [Methanococcus maripaludis S2]
 gi|45047629|emb|CAF30756.1| Diaminopimelate decarboxylase [Methanococcus maripaludis S2]
          Length = 436

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 65/398 (16%), Positives = 133/398 (33%), Gaps = 35/398 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK------LLLALKCFAAWGMFDTLNQYMDGTT 56
            TP Y++ + + + N    +   K    K      +  A K      +   L++   G  
Sbjct: 31  GTPLYVMSETQTVKNFTRYVESFKEYSEKTGKEFIISFAYKANTNLAVTRLLSKLGCGAD 90

Query: 57  SSSLYEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQK 113
             S  E+ +        E   +N   K  E   +    +      +++S+L    + A++
Sbjct: 91  IVSAGELYIAKLSDVPSEKIVFNGNCKLKEEIKMGIEAEIRAFNVDSISELVLINETAKE 150

Query: 114 LHK--KIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLM 162
           + K   +  R+NP+V              ++ G         E  K   + E   + G+ 
Sbjct: 151 MGKIANVAFRVNPNVDAKTHPKISTGMKKNKFGLDIESGIALETIKMAEKMENVKIVGIH 210

Query: 163 FHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ--- 216
            H   +      F+  +  + +      +   +I  ++LGGG+             +   
Sbjct: 211 CHIGSQLTYISPFVEEARKIMDFVVLLKNEGIKIRDVNLGGGLGIPYDKNTKIPVQKDLS 270

Query: 217 ------RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK-NLVIVDSSVEAHV 269
                   +   +     + LEPG ++V     L  TV  + E      V++D+ +   +
Sbjct: 271 KAVLDVIYEYEGKIELPNLILEPGRSLVATAGVLLGTVEHVKETPVAKWVMIDAGMNDMM 330

Query: 270 PDYLL--YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
              +   Y E              V G  C + D+FG+      +++ D ++  DV  Y 
Sbjct: 331 RPAIYESYHEITPCTIRAEKEVVSVAGGLCESSDVFGKDREISKMEVKDTVAILDVGAYG 390

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           I+  N +N    P + + N           +  D  + 
Sbjct: 391 ISMANNYNSRGKPAMILTNEKEVSLIRARETLADLISK 428


>gi|159905856|ref|YP_001549518.1| diaminopimelate decarboxylase [Methanococcus maripaludis C6]
 gi|159887349|gb|ABX02286.1| diaminopimelate decarboxylase [Methanococcus maripaludis C6]
          Length = 436

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 60/400 (15%), Positives = 131/400 (32%), Gaps = 35/400 (8%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVK------LLLALKCFAAWGMFDTLNQYMDG 54
           +  TP Y++ + + + N    +   K    K      +  A K      +   L++   G
Sbjct: 29  LYGTPLYVMSETQTVKNFTRYVESFKEYSEKTGKEFIISFAYKANTNLAVTKLLSKLGCG 88

Query: 55  TTSSSLYEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKA 111
               S  E+ +        E   +N   K  +   +    +      ++ S L    + A
Sbjct: 89  ADIVSAGELYIAKLSDVPSEKIVFNGNCKLKDEIKMGIEAEIRAFNVDSTSDLILINETA 148

Query: 112 QKLHK--KIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNG 160
           +++ K   +  R+NP+V              ++ G         E  K   + E   + G
Sbjct: 149 KEMGKVANVAFRVNPNVDPKTHPKISTGMKKNKFGLDIESGIALETIKMAEKMENVKIVG 208

Query: 161 LMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ- 216
           +  H   +      F+  +  + +      +   +I  ++LGGG+             + 
Sbjct: 209 IHCHIGSQLTDISPFVEEAKKIMDFVVLLKNEGIEIRDVNLGGGLGIPYDKNTKIPVQKD 268

Query: 217 --------RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK-NLVIVDSSVEA 267
                     +   +     + LEPG ++V     L  TV  + +      +++D+ +  
Sbjct: 269 LSKAVLDVIYEYEGKIELPNLILEPGRSLVATAGVLLGTVEHVKDTPVAKWIMIDAGMND 328

Query: 268 HVPDYLLYQESATIYP--NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
            +   +       +            V G  C + D+FG+      +++ D ++  DV  
Sbjct: 329 MMRPAIYEAYHEIVPCTVRAEKEVVSVAGGLCESSDVFGKDRELTKMEVKDTVAILDVGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y I+  N +N    P + + N           +  D  + 
Sbjct: 389 YGISMANNYNSRGKPAMILTNEKEVSLIRARETLADLISK 428


>gi|293606250|ref|ZP_06688613.1| diaminopimelate decarboxylase [Achromobacter piechaudii ATCC 43553]
 gi|292815397|gb|EFF74515.1| diaminopimelate decarboxylase [Achromobacter piechaudii ATCC 43553]
          Length = 410

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 52/400 (13%), Positives = 115/400 (28%), Gaps = 46/400 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   +   +             +  A K  +   +   + +      + SL E
Sbjct: 16  GTPLWVYDAAVIRERIAQLRRFD-----TIRYAQKACSNLHILRLMREEGAVVDAVSLGE 70

Query: 63  VMLGHE-KFGG----ETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
           +       F      E   +     D      +      +   ++  L++    +     
Sbjct: 71  IERSLAAGFDPKGEPEGMVFTADLIDHATLDTVLRHGITVNAGSLDMLDRVGQAS--PGH 128

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170
           ++ LRINP   +      +   P S+ G    D       +      + G+  H      
Sbjct: 129 RVWLRINPGFGHGHSNKTNTGGPQSKHGIWIDDVAKAVAIVRRHGLKLVGIHMHIGSGVD 188

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK-- 224
            +   S++   +          IE IS GGG+               + ++     ++  
Sbjct: 189 -YGHLSSVCDAMVDVVRSLDHDIEAISAGGGLSIPYRDGEPRIDCDHYFEQWDAARKRIE 247

Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279
               + +++ +EPG  ++     L T V  I+   +     VD+     +   +      
Sbjct: 248 QFLSHPIRLEIEPGRFLIAEAGVLVTEVHAINHRPERDFALVDAGFNDLMRPAMYGSFHR 307

Query: 280 TIYPNT--------GPYTAMVCGRSCLAGDIFGE-------FHFEKPVKIGDRISFEDVA 324
                               V G  C +GD+F +              +IGD +   +  
Sbjct: 308 ISVHAPDGSDPSGVEQTRIAVAGPLCESGDVFTQEEGGVMSDQLLPQPRIGDFMVLHNAG 367

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            Y  +  + +N   +    + +        R  +  +   
Sbjct: 368 AYGSSMSSNYNTRPLAPEVLLDQGQARLIRRRQTVAELLA 407


>gi|271966878|ref|YP_003341074.1| diaminopimelate decarboxylase [Streptosporangium roseum DSM 43021]
 gi|270510053|gb|ACZ88331.1| diaminopimelate decarboxylase [Streptosporangium roseum DSM 43021]
          Length = 451

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 52/392 (13%), Positives = 109/392 (27%), Gaps = 33/392 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP YL+D+++                 ++    K F    +   L+         +  E
Sbjct: 60  GTPAYLLDEEEFQARCAEWRDAL--PDGEVHYGGKAFLCPEVVRWLDAAGLCLDVCTGGE 117

Query: 63  VMLGHEK-FGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + +            ++   K       AV      ++ ++ +++ +    A +   +  
Sbjct: 118 LAVAVAGGMDPARVVFHGNNKSFAELRRAVTWGVGCVVVDSFAEIERLALLAGEAGVRQR 177

Query: 120 --LRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
             +R+ P V              S+ G         E  +  + +    + GL  H   +
Sbjct: 178 VMIRVTPGVEAHTHEFIATGGDDSKFGFSLNAGLAAEAVRRVLAAASLELTGLHSHIGSQ 237

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF-----CQRLK 219
                 F      M   +          I  + LGGG+    +               L+
Sbjct: 238 ITDLGGFTLAARRMAAFLLACEREHGVTIPKLDLGGGLGIVYRPGDPVPPRPAEVVAALR 297

Query: 220 EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLYQE 277
           E    +      EPG +I   T      V  + E       V     +  +    +    
Sbjct: 298 EAVPAHLRLAV-EPGRSIAGPTAVALYEVGTVKEIPGVNTYVSVDGGMSDNPRPAMYGAA 356

Query: 278 SATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKN 332
              +  +           V G+ C +GD+          V+ GD ++      Y  +  +
Sbjct: 357 YTALLASRSSDAPLREVTVVGKHCESGDVLVRDLPLPADVRPGDLLAIPASGAYQRSMAS 416

Query: 333 WFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            +N +  P +           +R  +  D   
Sbjct: 417 NYNHVTRPPVVAVRDGSARVVVRRETEEDLLR 448


>gi|148555770|ref|YP_001263352.1| diaminopimelate decarboxylase [Sphingomonas wittichii RW1]
 gi|148500960|gb|ABQ69214.1| diaminopimelate decarboxylase [Sphingomonas wittichii RW1]
          Length = 423

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 63/391 (16%), Positives = 116/391 (29%), Gaps = 28/391 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKN-----AGVKLLLALKCFAAWGMFDTLNQYMDGTT 56
           + TP Y+     +  ++               G  +  A+K      +  TL +   G  
Sbjct: 25  VGTPVYVYSTATIERHVAVFKAALAAVESGPEGPLIAFAVKANPNRAVLATLARAGLGAD 84

Query: 57  SSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKA-- 111
             S  E++         +   ++   K      +            +  +     + A  
Sbjct: 85  VVSGGELLRARAAGIPADKIVFSGVGKTEAEMRLGLEQGIFQFNIESEPEAEMLSEVAAA 144

Query: 112 QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFH 164
                 +  RINP+V               + G      I +  +       +V G+  H
Sbjct: 145 TGRRAPVAFRINPNVIAGTHAKISTGGSEDKFGVAYDRAIAAYARAAELPGLDVRGVAVH 204

Query: 165 NNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQ 216
              +        A  + I     E      +I    LGGG+                +  
Sbjct: 205 IGSQLTDLGPSRAAFEKIGALIAELRAAGHRIVTADLGGGLGVPYDPAKPVPPLPDAYGA 264

Query: 217 RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLY 275
            ++E +  ++ ++  EPG  IV N   L + V+ +        VIVD+++   +   L  
Sbjct: 265 MVREVTAGWNTRLVFEPGRVIVGNAGVLLSRVIRVKPGVTDPFVIVDAAMNDLMRPSLYD 324

Query: 276 QESAT--IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                  + PN    TA + G  C +GD F +      V  GD ++F     Y     N 
Sbjct: 325 AWHDIRAVTPNGAAMTANIVGPICESGDSFAKKRAMDAVGPGDLVTFMTAGAYGATMANT 384

Query: 334 FNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +N   +    + N D                
Sbjct: 385 YNSRALTPEVLVNGDQWAVVRERQPIEALIA 415


>gi|260437146|ref|ZP_05790962.1| protein TabA [Butyrivibrio crossotus DSM 2876]
 gi|292810458|gb|EFF69663.1| protein TabA [Butyrivibrio crossotus DSM 2876]
          Length = 422

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 58/390 (14%), Positives = 117/390 (30%), Gaps = 28/390 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+++ D++ +  N          N G +   A+K      + + L +Y  GT  SS  
Sbjct: 20  PTPFHIYDEKGIRENARKVKEAFAWNPGFREYFAVKATPNPFLINILREYGCGTDCSSKT 79

Query: 62  EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDK--------A 111
           E+ML       GE   ++       E          I  +  + ++              
Sbjct: 80  ELMLSKAIGCKGEEIMFSSNDTPPEEFVYANKLGAIINLDDFTHIDVIDKLIGIPETISC 139

Query: 112 QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-GLMFHNNCENK 170
           +     +    N  +           +     G K      ++   ++  L  +    + 
Sbjct: 140 RFNPGGLFSIANSIMDNPGDAKYGFTKEQLIEGFKILKAKGAKNFGIHSFLASNTVTNDY 199

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ-- 228
                  + +   +        I++I+L GG+    K     +    + E   K   +  
Sbjct: 200 YPSLAKILFELAVEIKNKTGCHIKFINLSGGVGIPYKPDGTPNDILAIGEGVHKVYDEVL 259

Query: 229 ---------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA 279
                    IY E G  ++     L T V ++    K  +  D+     +   +      
Sbjct: 260 VPNGMGDVAIYTEMGRFMMGPYGGLVTRVGNMKHTYKEYIGTDACAVNLMRPAMYGAYHH 319

Query: 280 TIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                       +   V G  C   D F        ++IGD +   D   +  +    +N
Sbjct: 320 ITVLGKENEPCDHKYDVTGSLCENNDKFAIDRMLPKIEIGDYLFIHDTGAHGFSMGYNYN 379

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           G       +   +G ++ IR   +  DY+ 
Sbjct: 380 GKLRSAELLLKENGEVQMIRRAETPEDYFR 409


>gi|322378891|ref|ZP_08053308.1| carboxynorspermidine decarboxylase (NspC) [Helicobacter suis HS1]
 gi|322380383|ref|ZP_08054589.1| carboxynorspermidine decarboxylase [Helicobacter suis HS5]
 gi|321147173|gb|EFX41867.1| carboxynorspermidine decarboxylase [Helicobacter suis HS5]
 gi|321148701|gb|EFX43184.1| carboxynorspermidine decarboxylase (NspC) [Helicobacter suis HS1]
          Length = 408

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 128/396 (32%), Positives = 209/396 (52%), Gaps = 34/396 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I +P Y+++  KL  NL     ++K AGVK++LALK FA W  F+ L   + G  +S +Y
Sbjct: 14  IPSPCYVLELAKLQRNLAILERVQKEAGVKIVLALKGFAFWRSFEWLRVSLHGCCASGVY 73

Query: 62  EVMLGHEKFG-----GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
           E +L +E+FG      E   ++  +K+ +I  +L     IIFN+ +Q + +KD     +K
Sbjct: 74  EALLAYEEFGSRESGKEICVFSPGFKEVDIKQLLPIATHIIFNSFAQYHAYKDLILAKNK 133

Query: 117 K----------IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVNGLM 162
           +          IGLRINP  S  + ++ +P  P SRLG   K   E   +     V+GL 
Sbjct: 134 QLSKLGLSSIKIGLRINPLFSRVQPLIYNPCAPHSRLGIPPKAFKEGLERYGLEGVSGLH 193

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
           FH +C+          L +++K FG  + Q++W+++GGG H + + Y ++   Q +++  
Sbjct: 194 FHTHCQQD-ASDLQEGLDHVKKHFGETLAQVQWLNMGGGQHMSKEGYALEVLIQAIQQLK 252

Query: 223 EKYSV--QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280
           + Y    +I+ EPGEA+   T  L ++VLDI EN   + I+D S+  H+PD L       
Sbjct: 253 KDYPNLAEIFCEPGEAVGYQTGFLLSSVLDIVENGAQIAILDVSITNHMPDCLEMPYKPE 312

Query: 281 IYP-----------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
           I+              G +   + G SCLAGD  G ++FE P+++GDRI FED+  Y I 
Sbjct: 313 IFKVALDGSVQVGSEAGEFGYFLGGVSCLAGDFIGPYYFENPLQVGDRIIFEDMLHYTIV 372

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + N FNGI +P++ +   +   K +++F ++ Y   
Sbjct: 373 KNNTFNGIALPSLGLIEHN-QFKLLKKFDFSHYKER 407


>gi|325282109|ref|YP_004254651.1| diaminopimelate decarboxylase [Odoribacter splanchnicus DSM 20712]
 gi|324313918|gb|ADY34471.1| diaminopimelate decarboxylase [Odoribacter splanchnicus DSM 20712]
          Length = 381

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 71/367 (19%), Positives = 119/367 (32%), Gaps = 25/367 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP+Y  + + L   +  A       G ++  A+K  A   +   ++Q   G    S  E
Sbjct: 11  PTPFYYYNLELLKKTVQAAKSESAPYGYRVHYAVKANANPVLLRLISQQGLGADCVSGNE 70

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK--FKDKAQKLHKKIG 119
           +    E  F  +T  Y    K      +    D   FN  S          A +L KK  
Sbjct: 71  IRQALECGFPADTIVYAGVGKSDAEIELALQHDIFCFNCESLPEIQVIDGIAARLGKKAR 130

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
             LRINP+V              ++ G    D           +   + GL FH   +  
Sbjct: 131 IALRINPNVDAHTHHYITTGIEENKFGIYLYDLEHVITEVAKLKQIELIGLHFHIGSQIT 190

Query: 171 S---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL-------KE 220
               F         I+++       +  I+ GGG+     +   K             + 
Sbjct: 191 DMTVFRGLCIRANEIQRQMKERGLFLPHINFGGGLGIDYNEPYEKPIADFQSYFATFARF 250

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES- 278
           F  +   QI+ E G +IV +   L + VL + E      ++ D+ +   +   L      
Sbjct: 251 FEPEPHQQIHFELGRSIVAHCGDLISKVLYVKEGKNRKFVILDAGMNDLLRPALYQAFHK 310

Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
              I  +       V G  C + D FG+       + GD I+      Y     + +N  
Sbjct: 311 IENISSDRPEEKYDVVGPICESADCFGKDVVLNETRRGDLIAIHSCGAYGEAMASRYNLR 370

Query: 338 NMPTIAV 344
           ++P    
Sbjct: 371 DLPGSVF 377


>gi|117620267|ref|YP_855006.1| diaminopimelate decarboxylase [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117561674|gb|ABK38622.1| diaminopimelate decarboxylase [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 416

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 56/385 (14%), Positives = 110/385 (28%), Gaps = 24/385 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  +   + + L +   G    S  E
Sbjct: 27  GTPLYVYSRATLERHWHAFDKAAGDIPHLICYAVKANSNLALLNLLARLGSGFDIVSGGE 86

Query: 63  V--MLGHEKFGGETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +  +L       +     VA  + E+  A+          + ++L +    A  + KK  
Sbjct: 87  LSRVLAAGGDPAKVVFSGVAKSEAEMRLALDKEILCFNLESEAELERLNRVAGGMGKKAR 146

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK 170
             +R+NP +              ++ G   +                + G+  H   +  
Sbjct: 147 VSVRVNPDIDAGTHPYISTGLKQNKFGIPIEQAPAIYRKAAAMANIEIVGVDCHIGSQLT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
               F         +          I  + +GGG+              + + LK+    
Sbjct: 207 ELNPFMEAADKLLRLIDGLAVEGIHIHHLDVGGGLGVNYGAEQPPHPSEYAEALKQKLAG 266

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATI-- 281
             + +  EPG AIV N   L T V  +          +D+ +   +   L       I  
Sbjct: 267 RDLTLLFEPGRAIVANAGVLLTRVEYLKPGETRNFALIDAGMNDLLRPSLYGAWMNIIEV 326

Query: 282 --YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                  P    V G  C  GD  G+      +  G  ++      Y     + +N    
Sbjct: 327 DSRTAHEPALYDVVGPVCETGDFLGKERTLA-IAEGSLLAVRSAGAYGFTMSSNYNTRPR 385

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
               + +   +          D + 
Sbjct: 386 AAEVLVDGAQSFLIREREQLADLWR 410


>gi|116072467|ref|ZP_01469734.1| Diaminopimelate decarboxylase [Synechococcus sp. BL107]
 gi|116064989|gb|EAU70748.1| Diaminopimelate decarboxylase [Synechococcus sp. BL107]
          Length = 459

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 55/396 (13%), Positives = 111/396 (28%), Gaps = 34/396 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP Y++D+Q L +         K         + A K  ++  M   +     G  + S
Sbjct: 52  GTPLYVLDEQTLRSTCRAYRDALKRHYPGPSLPIYASKANSSLVMSSLVASEGLGLDAVS 111

Query: 60  LYEVMLG-HEKFGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             E++        G+    +     D E+    +N  T++ +    L++      K    
Sbjct: 112 AGELLTALRGGMPGDRMVLHGNNKSDEELLLAYNNNVTVVVDNQHDLDRLSALIPKDGNP 171

Query: 118 IGLRIN--PSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168
           + L +   P +              S+ G             I      + GL  H   +
Sbjct: 172 VRLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQVEPVLRGLIGQSWARLTGLHAHIGSQ 231

Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK- 224
                    +   +             +E +++GGG+              R  +   + 
Sbjct: 232 IFELEPHRDLAAVMADALKLARDLGHPVEDLNVGGGLGIRYVKSDDPPSIDRWVQVVAEA 291

Query: 225 ----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDY 272
                        ++  EPG ++V        TV              +D  +  +    
Sbjct: 292 VIAACQARSLDLPRLMCEPGRSLVATAGVTLYTVGSRKTIPGIRTYVAIDGGMSDNPRPI 351

Query: 273 LLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
                      +        T  + G+ C +GD+  +       K GD I+      YN 
Sbjct: 352 TYQSLYTCCVADRPLAEADETVNLVGKHCESGDVLLKDLPLPSTKSGDVIAVFATGAYNA 411

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +  + +N I  P   + +        +    +D   
Sbjct: 412 SMSSNYNRIPRPAAVLVHDGAAELVQKREQPDDLLR 447


>gi|68271066|gb|AAY89059.1| meso-diaminopimelate decarboxylase [Streptomyces clavuligerus]
          Length = 463

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 59/398 (14%), Positives = 121/398 (30%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+    +          +    +  A K F +  +   L++        S  E
Sbjct: 63  GTPGYILDEDDFRDRARAWATALGHE-ADVFYAGKAFLSRAVVRWLHEEGLNLDVCSGGE 121

Query: 63  VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           ++         +  A++   K  +    AV +    I+ ++  ++ +    AQ L  +  
Sbjct: 122 LLTALDAGMPADRIAFHGNNKSLEEIERAVRAGVGRIVLDSSQEIVRVAHVAQALGVRQR 181

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
             +RI   V               + G            +  +  +   + GL  H   +
Sbjct: 182 GLIRITVGVEAHTHEFIATAHEDQKFGLPLAGGQAAEGVRRALGLDGLELIGLHSHIGSQ 241

Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F          +++       ++  I LGGG+             + + +   +
Sbjct: 242 IFDTSGFEVAAHRVVGLLQQVRDEHGVELPEIDLGGGLGIAYTPDDDPREPRHIAKALHE 301

Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271
                         ++ +EPG AIV  T      V  I      +  V VD  +  ++  
Sbjct: 302 IVTRECEDAKLRPPRMSVEPGRAIVGPTAFTLYEVGTIKPLPGLRTYVSVDGGMSDNIRT 361

Query: 272 YLLYQESATIYPNTGPYTA----MVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326
            L   E +    +     A     V G+ C +GDI  +  F    +  GD ++      Y
Sbjct: 362 ALYDAEYSVALVSRASDAAAMLSRVVGKHCESGDIVVKDAFLPRDLAPGDLLAVPATGAY 421

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +    +N    P +           +R  +  +   
Sbjct: 422 CRSMARNYNHALRPPVVAVRDGAARVIVRRETEEEILR 459


>gi|88808911|ref|ZP_01124420.1| Diaminopimelate decarboxylase [Synechococcus sp. WH 7805]
 gi|88786853|gb|EAR18011.1| Diaminopimelate decarboxylase [Synechococcus sp. WH 7805]
          Length = 453

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 49/396 (12%), Positives = 106/396 (26%), Gaps = 34/396 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKL-LLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP Y++D+  +           +    G  L + A K  ++  +   +     G  + S
Sbjct: 46  GTPLYVLDEASIRQACRAYREALERHYPGPSLAIYASKANSSMALTAVVASEGLGLDAVS 105

Query: 60  LYEVMLGHEK-FGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             E++   +     +    +       E+     N   ++ +    L+  +       + 
Sbjct: 106 AGELITALDGGMPADRMVLHGNNKSSEELALAYRNGVMVVADNQHDLDLLQTIVPDQGEP 165

Query: 118 IGLRIN--PSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCE 168
           + L +   P +              S+ G               +    V GL  H   +
Sbjct: 166 VRLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQLEPVLRSLQGASWARVEGLHAHIGSQ 225

Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRL------- 218
                    +   +             +E +++GGG+                       
Sbjct: 226 IFELEPHRDLAAVMADALLLARTLGHPVEDLNVGGGLGIRYTASDDPPSIDAWVQVVGSA 285

Query: 219 ----KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDY 272
                        ++  EPG ++V        TV    +   I+  + VD  +  +    
Sbjct: 286 VASACRERNLELPRLLCEPGRSLVATAGVTLYTVGARKVVPGIRTYLSVDGGMSDNPRPI 345

Query: 273 LLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
               +     A            + G+ C +GD+  +         GD +       YN 
Sbjct: 346 TYQSQYTACLADRPQARAEEMVTIAGKHCESGDVLLKDLAFPSCSSGDILVVLATGAYNS 405

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +  + +N I  P   + +        R     D   
Sbjct: 406 SMSSNYNRIPRPAAVLISASEAELVQRREQPEDLLR 441


>gi|227432346|ref|ZP_03914338.1| diaminopimelate decarboxylase [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227351867|gb|EEJ42101.1| diaminopimelate decarboxylase [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 431

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 66/395 (16%), Positives = 122/395 (30%), Gaps = 33/395 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D   +   +     I +   V   +  A K FA   ++  + Q        S 
Sbjct: 27  GTPLAVYDVTLIRKTMRAFKRIFEQENVPYVVSYAGKAFATKAIYQVVAQENIHADVVSG 86

Query: 61  YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F  +  ++N   K  D  + AV +   TII +   +L    +    + + 
Sbjct: 87  GELYTAIKADFPTQHLSFNGNNKSYDELVMAVENGVGTIIIDNFLELQLLSEITAEKNVI 146

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
           + I LRI+P +S          +  S+ G   +           I+    ++ GL  H  
Sbjct: 147 QDILLRISPGISAHTHEFISTGQQDSKFGFDLQTGQAKQAYDIAIKDNHLHLRGLHAHIG 206

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK----DFCQRLKEFS 222
            +      F      +      +  Q E I+ GGG      D         F   +    
Sbjct: 207 SQIFDVTGFEKNAALLADTAYSWGWQPEVINTGGGFGIRYTDEDQPLPESKFADAIIRVL 266

Query: 223 EKY-------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDYL 273
           ++          +I++EPG +IV        TV    +         VD  +  ++   L
Sbjct: 267 KEKATQYDWAMPEIWIEPGRSIVGPAGQTLYTVGSRKDIPGIRNYLAVDGGMGDNIRPAL 326

Query: 274 LYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
                  +  N           + G+ C +GD+          K GD +S      Y   
Sbjct: 327 YQANYEAVLANQPNAKSEEIVRIAGKYCESGDVLVWQEELPATKPGDVLSVLATGAYGYA 386

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             + +N    P +           +   ++    +
Sbjct: 387 MASNYNRNPRPAVVFVENGQHQVVVERETFEHIIS 421


>gi|257069086|ref|YP_003155341.1| diaminopimelate decarboxylase [Brachybacterium faecium DSM 4810]
 gi|256559904|gb|ACU85751.1| diaminopimelate decarboxylase [Brachybacterium faecium DSM 4810]
          Length = 470

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 62/407 (15%), Positives = 125/407 (30%), Gaps = 45/407 (11%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNA-----GVKLLLALKCFAAWGMFDTLNQYMDGTT 56
           + TP +++D+    +           A     G  +  A K F    +   + +   G  
Sbjct: 59  VGTPAFVLDEDDFRHRARAFRDAFAEAFRPHRGADVYYAGKAFLCGAVARWVEEDGLGLD 118

Query: 57  SSSLYEVMLG-HEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
             +  E+ +     F     A +   K       A+ +    I+ +++ ++++  + A +
Sbjct: 119 VCTGGELAVALRAGFPASRIALHGNNKSASEIRRALEAGVGRIVIDSLDEIDQVDEIAAR 178

Query: 114 LHKKIG--LRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLM 162
           L  + G  LR+   V               + G         E     +++   ++ GL 
Sbjct: 179 LGLRAGVMLRVTTGVEAHTHEFIATAHEDQKFGLSLTGGSAFEAVHRVLDAPQLDLLGLH 238

Query: 163 FHNNCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL 218
            H   +      F      +L+ + +        I+ + LGGG              + L
Sbjct: 239 SHIGSQIFDTGGFEVAARRVLQLVARVRDELGHTIDQLDLGGGFGVMYNTQHTPSTPEAL 298

Query: 219 -----------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--- 264
                          E     +  EPG AI   +T    +V  + +              
Sbjct: 299 AAGIAGIVEKQCHELELDVPHLAFEPGRAIAGPSTQTLYSVGTVKDVRLGGPHHRVYVSV 358

Query: 265 ---VEAHVPDYLLYQESATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGD 316
              +  +V   L   + + +         P    V G+ C +GDI  +  +    V+ GD
Sbjct: 359 DGGMSDNVRTALYDADYSCLLTGRVSEAAPEVVRVVGKHCESGDIVVKDEYLPADVRRGD 418

Query: 317 RISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
            IS      Y  +  + +N +  P +           IR  +  D  
Sbjct: 419 LISVPVTGAYCYSLASNYNHVPRPPVIAVRDGEIRTLIRRETEEDLL 465


>gi|284035161|ref|YP_003385091.1| diaminopimelate decarboxylase [Spirosoma linguale DSM 74]
 gi|283814454|gb|ADB36292.1| diaminopimelate decarboxylase [Spirosoma linguale DSM 74]
          Length = 424

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 66/387 (17%), Positives = 119/387 (30%), Gaps = 30/387 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y+ D  K++  +           +K+  A K      +   + Q      S S+ E  
Sbjct: 25  PLYVYDADKIIEKIGLLRSSFAGVNLKIKYAAKALTNISILKLMRQQGVEMDSVSVNEAR 84

Query: 65  LGH-EKFGGETHAYNVAYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
           +G    F      +  +    E     +S    +  +++  L             I +RI
Sbjct: 85  MGMMAGFEPGQIMFTPSGVSFEEIREAVSLGLQLNVDSLPLLEWVGQTYGT-QVPISIRI 143

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKSFLCFS 176
           NP +S    I        S+ G            +E     V GL  H   + K+   F 
Sbjct: 144 NPHISEGGNIKISTGHADSKFGISILQRDQIRAVVEQYQIPVAGLHIHTGSDFKNAGAFL 203

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV--------KDFCQRLKEFSEKYSVQ 228
              + +  +       + +I  G G     K+                  + F + Y   
Sbjct: 204 KGAEVL-FDLASDYPNLSFIDFGSGFKVAYKEGDHITDVEELGHQVSAAFQNFCKNYGRD 262

Query: 229 I--YLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQES------- 278
           +  + EPG+ +V+ +  L      + EN     + VDS +   +   +            
Sbjct: 263 LELWFEPGKFLVSESGHLLVKTNIVKENPTRTFVAVDSGLNHLIRPMMYDAYHDIKNISN 322

Query: 279 -ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
            +    +T   T  V G  C   D F        VK GD +SFE+   Y  +  + +N  
Sbjct: 323 PSIPGEDTAEKTYNVVGYICET-DTFATDRALPEVKPGDVLSFENAGAYGFSMASNYNAR 381

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
             P   +          +  ++ D   
Sbjct: 382 FRPAEVLVYEGTPYLIRQRETFEDLVR 408


>gi|303243073|ref|ZP_07329522.1| Orn/DAP/Arg decarboxylase 2 [Acetivibrio cellulolyticus CD2]
 gi|302589387|gb|EFL59186.1| Orn/DAP/Arg decarboxylase 2 [Acetivibrio cellulolyticus CD2]
          Length = 422

 Score =  203 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 62/393 (15%), Positives = 117/393 (29%), Gaps = 30/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +  N          N G K   A+K      +   L +   G   SS  
Sbjct: 19  PTPFHLYDEKGIRENARKLKEAFSWNKGFKEYFAVKATPNPSILKVLKEEGCGADCSSFT 78

Query: 62  EVMLGHE-KFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++     F G+   ++       +         TI  +  + ++  +  A      I 
Sbjct: 79  ELLMSKAVGFSGDEIMFSSNATPKEDFMLARELNSTINLDDFTHIDFLEKVAGIPET-IS 137

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCEN---- 169
            R NP   +            ++ G   +   E   K ++      G+            
Sbjct: 138 CRFNPGGDFVIDNQIMDTPKDAKYGFTREQMTEGYKKLISKGVKHFGMHAFLASNTVANE 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
              +    + K   +        I +I+L GG+    +          + E   K   +I
Sbjct: 198 YYPVLARTLFKTAVELKEETGAHIAFINLSGGVGIPYRPEQQPVDIHSIGEEIRKAFEEI 257

Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                      Y E G  ++     L +T +      K  + +D+     +   +     
Sbjct: 258 LVPAGMGDVAIYTELGRFMLGPYGCLVSTAIHEKHIHKEYIGLDACAANLMRPAMYGAYH 317

Query: 279 ATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   + G  C   D F        + IGD I   D   +       +
Sbjct: 318 HITVMGKENRPCDHKYDITGGLCENNDKFAIDRMLPKIDIGDLIVLHDTGAHGFAMGYNY 377

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       +   DG ++ IR   +  DY+  L
Sbjct: 378 NGKLRSAELLLREDGGVELIRRAETPADYFATL 410


>gi|290957373|ref|YP_003488555.1| diaminopimelate decarboxylase [Streptomyces scabiei 87.22]
 gi|260646899|emb|CBG69996.1| diaminopimelate decarboxylase [Streptomyces scabiei 87.22]
          Length = 463

 Score =  203 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 62/398 (15%), Positives = 119/398 (29%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y +D+                    +  A K F +  +   L++        S  E
Sbjct: 63  GTPAYFVDEADFRARARAWRTAFGQ-DADVFYAGKAFLSRAVVRWLHEEGLNLDVCSGGE 121

Query: 63  VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +          +  A++   K  D    AV +    I+ ++  ++ +    AQ L ++  
Sbjct: 122 LATALSAGMPADRIAFHGNNKSTDEIHRAVEAGVGRIVLDSFQEIVRVAHIAQSLGRRQR 181

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
             +R+   V               + G            +  +  +   + G+  H   +
Sbjct: 182 VQIRVTVGVEAHTHEFIATAHEDQKFGIPLAGGQAAEAVRRALRLDGLELIGIHSHIGSQ 241

Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F          ++        ++  I LGGG+               + +   +
Sbjct: 242 IFDTSGFEVAAHRVVGLLKDIRDEHGVELPEIDLGGGLGIAYTSADDPREPHEIAKALTE 301

Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271
                       + +I +EPG A+V  T      V  I      +  V VD  +  ++  
Sbjct: 302 IVNRECDAARLRTPRISVEPGRAVVGPTAFTLYEVGTIKPLDGLRTYVSVDGGMSDNIRT 361

Query: 272 YLLYQESATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326
            L   E +           P  A V G+ C +GDI     F    +  GD I+      Y
Sbjct: 362 ALYDAEYSVALVSRTSEAEPMLARVVGKHCESGDIVVRDAFLPADLAPGDLIAVPATGAY 421

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N +  P +   N       +R  +  D   
Sbjct: 422 CRSMASNYNHVLRPPVVAVNDGQARVIVRRETEEDLLR 459


>gi|297829990|ref|XP_002882877.1| hypothetical protein ARALYDRAFT_478856 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328717|gb|EFH59136.1| hypothetical protein ARALYDRAFT_478856 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 485

 Score =  203 bits (515), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 62/387 (16%), Positives = 123/387 (31%), Gaps = 27/387 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+YL  K ++  NL+      +     +  A+K      + + L     G    S  E+ 
Sbjct: 94  PFYLYSKPQITRNLEAYKEALEGVTSVIGYAIKANNNLKILEHLRSLSCGAVLVSGNELR 153

Query: 65  LGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKIGL 120
           L     F      +N       ++         +  ++   LN   + ++       + L
Sbjct: 154 LALLAGFDPTKCIFNGNGKLLEDLVLAAQEGVFVNVDSEFDLNNIVEASRISGKQVNVLL 213

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCENKSF 172
           RINP V              S+ G + +       +         + G   H        
Sbjct: 214 RINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDQVKAHPKELKLVGAHCHLGSTITKV 273

Query: 173 LCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSEK 224
             F      + +          ++ ++++GGG+               D    ++E    
Sbjct: 274 DIFRDAAVLMIEYIDEIRRQGFEVSYLNIGGGLGIDYYHAGAVLPTPMDLINTVRELVLS 333

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + + +EPG +++ NT      V  +  N  KN +++D S+   +   L          
Sbjct: 334 RDLNLIIEPGRSLIANTCCFVNHVTGVKTNGTKNFIVIDGSMAELIRPSLYDAYQHIELV 393

Query: 284 NTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
           +  P         V G  C + D  G+         G  +   D   Y ++  + +N   
Sbjct: 394 SPPPPEAEVTKFDVVGPVCESADFLGKDRELPTPPQGAGLVVHDAGAYCMSMASTYNLKM 453

Query: 339 MPTIAVKNVDGTIKAIRE-FSYNDYYN 364
            P       DG+I  IR   +++D+  
Sbjct: 454 RPPEYWVEEDGSISKIRHAETFDDHLR 480


>gi|320530481|ref|ZP_08031539.1| putative diaminopimelate decarboxylase [Selenomonas artemidis
           F0399]
 gi|320137314|gb|EFW29238.1| putative diaminopimelate decarboxylase [Selenomonas artemidis
           F0399]
          Length = 425

 Score =  203 bits (515), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 62/393 (15%), Positives = 116/393 (29%), Gaps = 31/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+++ D++++  N            G +   A+K      +   L++   GT  SS+ 
Sbjct: 21  PTPFHIYDERRIRANYRRLRDAFAWAPGFREHFAVKALPNPRIVQLLHEEGAGTDCSSIA 80

Query: 62  EVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           E+++       GE         D   D      +      +  +      A+       L
Sbjct: 81  ELLISEAAGVTGEEIMLTSN--DTPFDEFQKAIELGAVINLDDITHLAYMAEHAGVPEVL 138

Query: 121 RINPSV-SYSKFILADPNRPFSRLGEKCKDKI----ESEIKNVNGLMFHNNCENKSFLCF 175
               +     +          ++ G      +     +    V     H    +      
Sbjct: 139 SFRYNPGDTIEGNDIIGKPVEAKYGLTHTQMLEGYARARAMGVRRFGLHTMVISAELRTE 198

Query: 176 ------SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
                   M +   +        +E+++LGGG     +          +    E+   +I
Sbjct: 199 AFLLTARIMFELAVELEEKLGIHVEFVNLGGGFGIPYRPEEDPVDFAAVGAGIERLYNEI 258

Query: 230 Y-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                        E G AI  +   L + VL   +  K+ V +DS +   +   L     
Sbjct: 259 MRPAGLGDVAIRTESGRAITGDAGWLVSMVLHKKDTYKHYVGLDSCMANLMRPALYGAYH 318

Query: 279 ATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        + IGD I   D   +       +
Sbjct: 319 HITVLGKEHAPADHVYDVTGSLCENNDKFAIDRALPQIGIGDIIVIHDTGAHGSAMGFNY 378

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       +   DGT++ IR   + +DY+  L
Sbjct: 379 NGKLHCAELLLREDGTVELIRRAQTLDDYFATL 411


>gi|167588224|ref|ZP_02380612.1| diaminopimelate decarboxylase [Burkholderia ubonensis Bu]
          Length = 412

 Score =  203 bits (515), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 58/400 (14%), Positives = 122/400 (30%), Gaps = 46/400 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   + + +             +  A K  +   +   +        + SL E
Sbjct: 16  GTPLWVYDADVIRDRIAQLRRFDV-----IRYAQKACSNVHILKLMRDEGVLVDAVSLGE 70

Query: 63  VMLGHEKF-----GGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHK 116
           +              E   +     D    A +  +  T+   ++  L +  + A     
Sbjct: 71  IERSLAAGFQPDGDPEGVVFTADLIDRPTLAAVLKHGVTVNAGSLDMLARIGEHA--SGH 128

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENK 170
           ++ LRINP   +      +   P S+ G          + +      + G+  H      
Sbjct: 129 RVWLRINPGFGHGHSNKTNTGGPQSKHGIWIGDVPRAIEIVRQYGLKLVGIHMHIGSGVD 188

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEF 221
            +   S +   +          I+ IS GGG+               Y  +    R +  
Sbjct: 189 -YGHLSQVCDAMVDLVTSLGHDIDAISAGGGLSIPYRDGEPRVDVDHYFSQWDAARKRIE 247

Query: 222 SE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQES- 278
               + V+I +EPG  +V  + TL   V  ++   K+  + +D+     +   +      
Sbjct: 248 QHLGHPVRIEIEPGRFLVAESGTLVAEVQSVNRRPKHDFVLIDAGFNDLMRPAMYGSYHG 307

Query: 279 ATIYPNTGPYT-------AMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324
            T++   G            + G  C +GD+F +              +IGD +   D  
Sbjct: 308 ITVHAPDGAEPDGRPLAHVAIAGPLCESGDVFTQDAGGVVTHRHLPQPQIGDLLFLHDAG 367

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            Y  +  + +N   +    + +        R  +  +   
Sbjct: 368 AYGSSMSSNYNSRPLAPEVLVDRGAPRLIRRRQTITELLA 407


>gi|126445408|ref|YP_001063058.1| Rieske family iron-sulfur cluster-binding protein
            /carboxynorspermidine decarboxylase [Burkholderia
            pseudomallei 668]
 gi|126224899|gb|ABN88404.1| iron-sulfur cluster-binding protein, rieske family/putative
            carboxynorspermidine decarboxylase [Burkholderia
            pseudomallei 668]
          Length = 1110

 Score =  203 bits (515), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 103/372 (27%), Positives = 181/372 (48%), Gaps = 12/372 (3%)

Query: 3    KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
             TP ++ D++ L   L +   +  ++G +LL  LK F+  G  + +  ++DG  +SS +E
Sbjct: 731  DTPAFVYDERTLRGALSSMHTLLGDSGCRLLYPLKPFSHAGALECIGPHVDGFAASSPFE 790

Query: 63   VM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
                       G  H    A +D ++  ++ NCD +  N++SQ  +  D A       GL
Sbjct: 791  AAFSRTLLGRAGSVHLATPALRDRDLGTIVDNCDYVALNSLSQWRRLHD-ALAGRLSCGL 849

Query: 121  RINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174
            RINP  S       DP RP S+LG                +  + G+ FH NC++  F  
Sbjct: 850  RINPQYSVVADARYDPCRPHSKLGVPLDAIERVVASDPRALHGLQGIHFHTNCDSTDFSR 909

Query: 175  FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
             +  ++++EK     +  + WI+LGGG       Y  +      K   E + V +++EPG
Sbjct: 910  LAETIEHLEKRLARTLDGLAWINLGGGYIADGARYVDRFRACA-KRLREHFGVALFIEPG 968

Query: 235  EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI--YPNTGPYTAMV 292
             AIV    T+  +V+D+ ++    + V  +   H P+   YQ    +  +     +  ++
Sbjct: 969  AAIVRAAGTIIASVVDLFDSGGMPIAVLDTTVNHYPEVFEYQFQPDVDGHHPAHAHAYLL 1028

Query: 293  CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352
             G SCLAGD+FG + F+ P+++G R++F +   Y + + + FNGIN+P++  +  DG + 
Sbjct: 1029 AGASCLAGDVFGTYRFDAPLRVGSRVAFVNAGAYTLVKAHRFNGINLPSVYRRGEDGALA 1088

Query: 353  AIREFSYNDYYN 364
            A++ FSY D+  
Sbjct: 1089 AVQRFSYEDFLR 1100


>gi|224370799|ref|YP_002604963.1| LysA4 [Desulfobacterium autotrophicum HRM2]
 gi|223693516|gb|ACN16799.1| LysA4 [Desulfobacterium autotrophicum HRM2]
          Length = 417

 Score =  203 bits (515), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 66/391 (16%), Positives = 122/391 (31%), Gaps = 30/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+++ D+  +L              G +   A+K      +   +     G   SS  
Sbjct: 23  GTPFHIYDEAGILETGARLKTAFSKIPGFREYYAVKALPNPSIMKIMQGLGFGFDCSSTP 82

Query: 62  EVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           E++L  +     +   +       +          +I N          K   + + I  
Sbjct: 83  EILLARQINSPSQDIMFTSNNTSQKDFETACMDGGVILNLDDIS--LVPKVPVMPELICF 140

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCE----NK 170
           R NP     +      N   S+ G      I++    ++      GL             
Sbjct: 141 RYNPGPR-REGNKIIGNPVESKYGVSYDQIIDAYKAAMDRGAKRFGLHTMLASNELDYTY 199

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL----------KE 220
                  +L  ++          E+I++GGG+    +        + L           +
Sbjct: 200 MVETTRMILDMVKMVSTALNITFEFINIGGGLGIPYRPEDKPLDIEALGRETGDLLAKFQ 259

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280
            +  +S ++++E G  I      L TTV++  +  +  V VD+S+ A +   +       
Sbjct: 260 QTHDWSPKLFMESGRFITGPHGALVTTVINHKDIYRQYVGVDASMSALMRPGMYNAYHHI 319

Query: 281 IY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                  +    T  V G  C   D F         + GD +   D   +       +NG
Sbjct: 320 HIPGKEHSKDLQTVDVVGSLCENNDKFAVQRTLPRTEEGDLLVIHDTGAHGHAMGFNYNG 379

Query: 337 INMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
              P   +   DGTI+ IR      DY+  L
Sbjct: 380 NLRPKELLLKTDGTIELIRRAERVEDYFATL 410


>gi|241766269|ref|ZP_04764164.1| diaminopimelate decarboxylase [Acidovorax delafieldii 2AN]
 gi|241363637|gb|EER59039.1| diaminopimelate decarboxylase [Acidovorax delafieldii 2AN]
          Length = 417

 Score =  203 bits (515), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 51/397 (12%), Positives = 107/397 (26%), Gaps = 47/397 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   +   +             +  A K  +   +   + +      + S  E
Sbjct: 18  GTPLWVYDAATVRQRIAQLSNFE-----TIRFAQKACSNIHILRLMREQGVKVDAVSRGE 72

Query: 63  VMLGHE--------KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-AQK 113
           ++              G     +     D    A +   +  +      ++      A  
Sbjct: 73  ILRALAAGYQAGTPGEGPAEIVFTADLFDAATLACVV--EHGVPVNAGSIDMLHQLGAAS 130

Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNC 167
               + LRINP   +      +     S+ G    D       I      + GL  H   
Sbjct: 131 PGHAVWLRINPGFGHGHSNKTNTGGEHSKHGIWHTDLPAALAAIRQHGLKLAGLHMHIGS 190

Query: 168 ENKSFLCFSAMLKNIEKEFGHF--ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-- 223
                         +E           ++ IS GGG+    +D       Q      +  
Sbjct: 191 GVDYRHLEQVCGAMVELVRATHAAGHDLQAISAGGGLSIPYRDGDPVIDTQHYHGLWDAA 250

Query: 224 --------KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL 274
                   ++ + + +EPG  +V  +  L   V        N  ++ D+     +   + 
Sbjct: 251 RQQAEAIVRHPLGLEIEPGRYLVAESGVLLGEVRATKNAGNNHFMLLDTGFNELMRPSMY 310

Query: 275 YQESATIY-----PNTGPYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFED 322
                               ++V G  C +GD+F +              ++GD +   D
Sbjct: 311 GSYHTMSVLRRDGSTAAERPSVVAGPLCESGDVFTQGDGGVVLPRNLPDARVGDLLVIHD 370

Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
              Y  +  + +N   +    + +        R  + 
Sbjct: 371 AGAYGASMSSNYNTRPLVAEVLFDGGQARLIRRRQTV 407


>gi|240169521|ref|ZP_04748180.1| diaminopimelate decarboxylase LysA [Mycobacterium kansasii ATCC
           12478]
          Length = 468

 Score =  203 bits (515), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 53/406 (13%), Positives = 120/406 (29%), Gaps = 45/406 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +++D+    +            G  +  A K F    +   + +       ++  E
Sbjct: 60  GTPLFVVDEDDFRSRCQEIAAAFGG-GHNVYYAAKAFLCSEIARWVEEEGLSLDVATGGE 118

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F  E    +   K       AV +    ++ +++ ++ +    A +    + 
Sbjct: 119 LAVALHADFPPERITLHGNNKSVAELTAAVKAGVGHVVLDSMIEIERLDAIAAQAGVIQD 178

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G            +    ++   + GL  H   +
Sbjct: 179 VLVRVTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVFAADHLRLVGLHSHIGSQ 238

Query: 169 NKSFLCFSAMLKNIEKEFGHFI--------TQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F      +       +         Q+  + LGGG+  +            L  
Sbjct: 239 IFDVAGFEIAAHRVIGLLREVVGEFGAEKTAQLSTVDLGGGLGISYVPADDPPPISELAA 298

Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDS 263
                           + ++ +EPG AI    T     V  + +        +  V VD 
Sbjct: 299 KLSAILSNESAAVGLPTPRLVVEPGRAIAGPGTITLYEVGTVKDVDVSATANRRYVSVDG 358

Query: 264 SVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318
            +  ++   L   E      +   +     A + G+ C +GDI     +    ++ GD +
Sbjct: 359 GMSDNIRTALYDAEYDVRLVSRVSDAPAVPARLVGKHCESGDIIVRDTWMPEDLRPGDLL 418

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
                  Y  +  + +N I  P +           +R  + +D  +
Sbjct: 419 GVAATGAYCYSLSSRYNLIGRPAVVAVRRGKARLVLRRETVDDLLS 464


>gi|54023015|ref|YP_117257.1| putative diaminopimelate decarboxylase [Nocardia farcinica IFM
           10152]
 gi|54014523|dbj|BAD55893.1| putative diaminopimelate decarboxylase [Nocardia farcinica IFM
           10152]
          Length = 473

 Score =  202 bits (514), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 61/406 (15%), Positives = 118/406 (29%), Gaps = 45/406 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +++D+    +     +        ++  A K F    +   L          S  E
Sbjct: 64  GTPLFVVDEDDFRSRCRDMVRAF-GPDARVHYASKAFLCGEIARWLRDEGLSLDVCSGGE 122

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIF--NTVSQLNKFKDKAQKL--HKK 117
           + +     F  E  A +   K                  +++ ++ + +  A++    + 
Sbjct: 123 LAIALHAGFPAERIALHGNNKSVAELEAAVAAGVGHVVVDSLIEIERLEAVAERAGVVQD 182

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G         E      E+    + GL  H   +
Sbjct: 183 VLVRVTVGVEAHTHEYISTAHEDQKFGFSIAGGDAMEALARVFEASNLRLVGLHSHIGSQ 242

Query: 169 NKSFLCFSAMLKNIEKEFGHFIT--------QIEWISLGGGIHFTDKDYPVKD----FCQ 216
                 F    + +       I         QI  + LGGG+  +            F  
Sbjct: 243 IFEIDGFEIAARRMLGLLRAAIDTFGVERTAQISTLDLGGGLGISYLPEDNPPPLDEFAA 302

Query: 217 RLKEFSEKY-------SVQIYLEPGEAIVTNTTTLNTTVLDISEN------IKNLVIVDS 263
           +L+    +           I +EPG AI    T     V  I +        +  V VD 
Sbjct: 303 KLRAIVAEEAARAGLPEPTIAVEPGRAIAGPGTVTVYEVGTIKDVSLDAGLRRRYVSVDG 362

Query: 264 SVEAHVPDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEK-PVKIGDRI 318
            +  ++   L   +      +         A V G+ C +GDI     +    V  GD I
Sbjct: 363 GMSDNIRPALYQADYDCRLVSRPSEAEAVLARVVGKHCESGDIVIRDTWMPADVGPGDLI 422

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +      Y  +  + +N +  P +           +R  +  D  +
Sbjct: 423 AVAATGAYCYSMSSRYNQLTRPAVVAVRDGSARLVLRRETVADLLS 468


>gi|300789615|ref|YP_003769906.1| diaminopimelate decarboxylase [Amycolatopsis mediterranei U32]
 gi|299799129|gb|ADJ49504.1| diaminopimelate decarboxylase [Amycolatopsis mediterranei U32]
          Length = 476

 Score =  202 bits (514), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 54/411 (13%), Positives = 116/411 (28%), Gaps = 50/411 (12%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +++D+    +          +    +  A K F +  +   + +        S  E
Sbjct: 64  GTPLFVVDEADFKSRCADYAEAFDDP-SLVHYASKAFLSIEIARWVAEQGLSLDVCSGGE 122

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTII--FNTVSQLNKFKDKA--QKLHKK 117
           + +     F  E   ++   K                  ++  ++ +  D A    + + 
Sbjct: 123 LAVAQRADFPAERITFHGNNKSPAELEAAVVAGVGTVVLDSYFEIARLADIAARHDVVQS 182

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G         E  +  + +    + GL  H   +
Sbjct: 183 VLIRVTVGVEAHTHEFIATAHEDQKFGFSLASGDAAEAVRRVLNARSLKLVGLHSHIGSQ 242

Query: 169 NKSFLCFSAMLKNIEKEFG--------HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F    + +               + Q+  + LGGG      +        ++  
Sbjct: 243 IFDADGFEVAARRVVGLLADLAKEHGPELLDQLSLVDLGGGFGIAYTEKDNPPPPAQMIT 302

Query: 221 FSEKYSVQIYL-----------EPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDS 263
              +   +              EPG AI    T     V  I +      + +  V VD 
Sbjct: 303 QIREIVRKECAYAGLPVPRIAGEPGRAIAGPGTITLYEVGTIKDVSLGDESARRYVSVDG 362

Query: 264 SVEAHVPDYLLYQESATIY------PNTGPYTA---MVCGRSCLAGDIFGEFHFEKP-VK 313
            +  ++   L                N  P  A    V G+ C +GDI     +    + 
Sbjct: 363 GMSDNIRTALYDAVYDVRLVSRSAGDNEQPVPAVLSRVVGKHCESGDIVVRDCWLPDTLA 422

Query: 314 IGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            GD ++      Y  +  + +N +  P +       +   +R  + +D   
Sbjct: 423 PGDLLAVAATGAYCYSMASTYNRMPRPAVVAVRNGSSRLLLRRETTDDMLR 473


>gi|311740632|ref|ZP_07714459.1| diaminopimelate decarboxylase [Corynebacterium pseudogenitalium
           ATCC 33035]
 gi|311304152|gb|EFQ80228.1| diaminopimelate decarboxylase [Corynebacterium pseudogenitalium
           ATCC 33035]
          Length = 445

 Score =  202 bits (514), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 64/404 (15%), Positives = 135/404 (33%), Gaps = 43/404 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP Y+ D+    +               +  A K F +  + + +N+      ++SL E
Sbjct: 39  QTPLYVFDEDDFRSRCQDMARAFGGPEH-VHYASKAFISKKIVNWVNEEGLCLDAASLNE 97

Query: 63  VMLGHEK-FGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F  E    +   KD E   +        ++ +   +L +    A +    + 
Sbjct: 98  LKIALAAEFPAERITTHGNNKDEEYLRLCVDAGVGHVVIDNELELEELNRIAGEAGKVQP 157

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + +R+ P V               + G            K  +E++  +++GL  H   +
Sbjct: 158 VMIRVKPGVDAHTHEFIATAHEDQKFGISLATGAAFAAAKRCLEADNLHLSGLHCHVGSQ 217

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK----- 219
             +   F      ++    + +      +E + LGGG       Y      +R+      
Sbjct: 218 VFNAEGFKLAAERVMGLYRQIYTELGVTLEELDLGGGFGIPYMPYEEALDIERVAGDMLG 277

Query: 220 ------EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE--------NIKNLVIVDSSV 265
                 E     +  + +EPG ++V  +      V  + +         ++  + VD  +
Sbjct: 278 AVKDTAEELGIAAPFLLVEPGRSLVAGSAVTVYRVGTVKDVETGKSDLPLRRYISVDGGM 337

Query: 266 EAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISF 320
             ++   L            + +    ++ V G  C +GDI  E       ++ GD I+F
Sbjct: 338 SDNIRPALYGSAYDVRVVNRFSDGEEVSSRVVGFHCESGDILLEDGELPNDIQSGDLIAF 397

Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
               GY     + +NG   P +    V  T   +R  +  D  +
Sbjct: 398 AATGGYQYMMSSRYNGAVRPAVVATRVGQTKPMLRRETIEDLLS 441


>gi|291519892|emb|CBK75113.1| Diaminopimelate decarboxylase [Butyrivibrio fibrisolvens 16/4]
          Length = 423

 Score =  202 bits (514), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 64/392 (16%), Positives = 120/392 (30%), Gaps = 29/392 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           I TP+ + D++ +  N          N G K   A+K      +   L +   G   +S 
Sbjct: 18  IPTPFNIYDEKGIRENARKVNEAFSWNKGFKEYFAVKANPNPFILKILQEEGCGVDCASY 77

Query: 61  YEVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E+ L +E  F G+   ++       E          +  +  + ++ ++       KK+
Sbjct: 78  VELALSNEIGFKGDDIMFSSNDTPASEYQYADDLGVIVNLDDFTHIDFYEKVVGHFPKKM 137

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVN--GLMFHNNCEN--- 169
             R NP   Y        N   S+ G   +   E+      K V   G+           
Sbjct: 138 SCRYNPGGVYELSNGIMDNPGDSKYGMTKEQIFEAYQILRDKGVEEFGIHAFLVSNTVTN 197

Query: 170 -KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
                    + + I +        + +++L GG+    +     +   ++ E   K   +
Sbjct: 198 DYYPALARTLFELIVELKEKTGISLSFVNLSGGVGIAYRPDQKPNDILKIGEGVHKAFDE 257

Query: 229 IYL-----------EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
           I +           E G  ++     L TT +      K  + VD+     +   +    
Sbjct: 258 ILVPAGLGDVAILTEMGRFMMGPYGGLVTTAIHEKHIYKEYIGVDACAVDLMRPAIYGSY 317

Query: 278 SATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                         +   V G  C   D F        +  GD +   D   +  +    
Sbjct: 318 HHVTVLGKENAPEDHVYDVTGSLCENCDKFAVDRQLPKIDKGDILFIHDTGAHGYSMGYN 377

Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           +NG       +   DG+ K IR   +  DY  
Sbjct: 378 YNGKLKSAEVLLKEDGSFKLIRRPETIKDYLA 409


>gi|325841752|ref|ZP_08167446.1| diaminopimelate decarboxylase [Turicibacter sp. HGF1]
 gi|325489871|gb|EGC92222.1| diaminopimelate decarboxylase [Turicibacter sp. HGF1]
          Length = 430

 Score =  202 bits (514), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 59/399 (14%), Positives = 117/399 (29%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           +TP Y+ D+  L  N        K    G ++  A K F    M   + +        S 
Sbjct: 29  QTPLYVFDEALLRQNCKDYRKHFKVEERGNRVAYAGKAFLPLYMCHLIKEEGLYLDVVSG 88

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK--LH 115
            E+       F  +   ++   K  +   +         + +   +L        K    
Sbjct: 89  GELYTAYKADFPMDHVLFHGNNKTFDEINMGLEYGVGVFVVDNYYELETLNTMCHKRGKQ 148

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
           + + LRI P +           +  S+ G    +           + E  N+ GL  H  
Sbjct: 149 QNVYLRITPGIEAHTHDYIKTGQIDSKFGFTLSNGDLQRCLEVFHKYEHLNLIGLHAHIG 208

Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD--------- 213
            +             M+  ++     F  +I  + LGGG+     +              
Sbjct: 209 SQIFDVNPFLDEVEIMMTLVKDIKEQFGFEITDVDLGGGVGVYYTEKDAPKSIAQFCEAI 268

Query: 214 --FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
               Q + E  +    ++ +EPG +IV N  +    V  + +       V     +  ++
Sbjct: 269 LTKAQTVCETLQIDIPRLIIEPGRSIVANAGSTLYMVGSMKDIKDVRTYVSVDGGMTDNI 328

Query: 270 PDYLLYQESAT----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L              +       + G+ C +GDI         ++ GD +       
Sbjct: 329 RPSLYQAVYECAIANWMESGNERHVTIAGKCCESGDILITDVDVNKIESGDILIITSTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  + +N I    +            R  +Y +  +
Sbjct: 389 YGYSMSSNYNKIPKAAVVAVKDGEAQLICRRQTYEELLS 427


>gi|261367053|ref|ZP_05979936.1| diaminopimelate decarboxylase [Subdoligranulum variabile DSM 15176]
 gi|282571172|gb|EFB76707.1| diaminopimelate decarboxylase [Subdoligranulum variabile DSM 15176]
          Length = 421

 Score =  202 bits (514), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 59/392 (15%), Positives = 121/392 (30%), Gaps = 30/392 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           + TP++L D++ +  N          N G K   A+K      +   L +   G   SS 
Sbjct: 20  VPTPFHLYDEKGIRENARRVNAAFAWNKGFKEYFAVKATPNPYILKILQEEGCGVDCSSY 79

Query: 61  YEVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E+++     F G    ++       ++         I  + ++ +   +  A       
Sbjct: 80  TELLMSEACGFTGSDIMFSSNDTPVQDMQKAYELGAYINLDDLTHVEFLQQVAGIPKTIC 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSF 172
             R NP   +        N   ++ G       ++  K +       G+         + 
Sbjct: 140 C-RYNPGGVFDLGNGIMDNPGDAKYGMSEDQMAQAYTKLMALGAEEFGIHAFLASNTVTD 198

Query: 173 LCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
             +      + +   +       +I++I+L GG+    +     +   ++ E   K   +
Sbjct: 199 EYYPKLAGILFRLAVRLHERTGAKIKFINLSGGVGIAYRPEQRSNDIAKIGEGVRKQYEE 258

Query: 229 I-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
           I           + E G  ++     L TTVL      K  + VD+     +   +    
Sbjct: 259 ILVPAGLGDVALFTEMGRYMLAPYGGLVTTVLHEKHIYKEYIGVDACAANLMRPAMYGAY 318

Query: 278 SATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                         +   + G  C   D F        +  GD +   D   +  +    
Sbjct: 319 HHITVLGKESKPCDHKYDITGGLCENNDKFAIDRMLPKIDKGDVLFIHDTGAHGFSMGYN 378

Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           +NG       +   DG+ + IR   +  DY+ 
Sbjct: 379 YNGKLRSAEVLLKEDGSHQLIRRAETPEDYFA 410


>gi|297622385|ref|YP_003703819.1| diaminopimelate decarboxylase [Truepera radiovictrix DSM 17093]
 gi|297163565|gb|ADI13276.1| diaminopimelate decarboxylase [Truepera radiovictrix DSM 17093]
          Length = 385

 Score =  202 bits (514), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 58/369 (15%), Positives = 111/369 (30%), Gaps = 12/369 (3%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP Y+ D   + + +            +LL A+K      +   L     G    S+ E+
Sbjct: 18  TPTYVYDLDAIGDRVARLRAAL--PTAELLYAVKANPCGAVLRHLAAAGLGAEVISVGEL 75

Query: 64  MLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL-HKKIGLR 121
                  F           +D  + A       +  +  SQ   ++  A +    +  LR
Sbjct: 76  ARARRAGFPEGRILLGGPRQDPPLVAAAWGVGWVSLDNPSQWRGWQRFAAREGAPRFLLR 135

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIE---SEIKNVNGLMFHNNCENKSFLCFSAM 178
           +NP +              S+ G    +      +  +++ G   H   +      +  +
Sbjct: 136 LNPGLDPRTHEHLATGAARSKFGMPFGELAALGAALGEHLAGFHVHIGSQITELGAYEPV 195

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
              +      F    + + LGGG        P +   +     ++    ++ LEPG  +V
Sbjct: 196 FAQLGALLTRF-PHADTLDLGGGFAVPGFALP-EFSARVRAFLAQVPFRRLLLEPGRFLV 253

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY---TAMVCGR 295
             +  L T VL + E     VI D+ +   +   L   +              +A + G 
Sbjct: 254 AESGVLLTRVLHVKEGPVRHVIADAGMADLLRPALYGAQHPVRVLGAADGASGSADLDGP 313

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
            C   D          +  G  ++ E    Y     + +     P   V        A R
Sbjct: 314 LCENADRLARGVALPALTPGTLLAVEQAGAYGFAMASNYASSLRPAEVVVAGGEVRLARR 373

Query: 356 EFSYNDYYN 364
             + +D   
Sbjct: 374 RETPDDLVQ 382


>gi|282900558|ref|ZP_06308500.1| Diaminopimelate decarboxylase [Cylindrospermopsis raciborskii
           CS-505]
 gi|281194358|gb|EFA69313.1| Diaminopimelate decarboxylase [Cylindrospermopsis raciborskii
           CS-505]
          Length = 466

 Score =  202 bits (513), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 46/398 (11%), Positives = 112/398 (28%), Gaps = 36/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P Y++D+  +                   ++L A K +    +   +     G    S
Sbjct: 60  GSPLYILDELTVRTACQQYRDAFNKYYKGQSQILYASKAWNCLAVCAIVASEGLGIDVVS 119

Query: 60  LYEVMLGH-EKFGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             E+          +    +       E+   +    TI+ +   +L       ++  + 
Sbjct: 120 GGELYTALTAGMSPDKIYLHGNNKSHHELIFAVETGCTIVVDNWYELKTLVAILEQEDQA 179

Query: 118 IGLRIN----PSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNN 166
             +RI     P +              S+ G    D         +    +  GL  H  
Sbjct: 180 KKIRIMLRLTPGIECHTHEYIRTGHLDSKFGFDPNDLPEVFSFVSQQSRLHCVGLHAHIG 239

Query: 167 CENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKD--------FC 215
            +         +   + +       +  ++  +++GGG+     +              C
Sbjct: 240 SQIFERQPHRDLAAVMVQWLHEAKQYNLELAELNVGGGLGIKYTESDDPPSIEEWSRAIC 299

Query: 216 QRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVP 270
           + ++    + +    ++  EPG +++        T+            V     +  +  
Sbjct: 300 EVVQSVCAEENLPLPKLLCEPGRSLIATGGVTAYTIGSTKTIPDIRTYVTIDGGMSDNPR 359

Query: 271 DYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
                     +  N        T  + G+ C +GDI  +       + GD +       Y
Sbjct: 360 PITYQSVYRAVVANKMSAPLTETVTLAGKHCESGDILIKNVQLPKTEPGDVLVVMTTGAY 419

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           N +  + +N +  P   +         ++  +Y D   
Sbjct: 420 NYSMASNYNRLPRPAAVLVANGEANLILQRETYQDIIR 457


>gi|171320534|ref|ZP_02909560.1| diaminopimelate decarboxylase [Burkholderia ambifaria MEX-5]
 gi|171094227|gb|EDT39308.1| diaminopimelate decarboxylase [Burkholderia ambifaria MEX-5]
          Length = 412

 Score =  202 bits (513), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 59/400 (14%), Positives = 120/400 (30%), Gaps = 46/400 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   + + +             +  A K  +   +   +        + SL E
Sbjct: 16  GTPLWVYDADVIRDRIAQLRQFDV-----IRYAQKANSNLHILKLMRDERVCVDAVSLGE 70

Query: 63  VMLGHEKF-----GGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHK 116
           +              E   +     D    A +  +  T+   ++  L +  + A     
Sbjct: 71  IERSLAAGFSPAGDPEGVVFTADLIDRPTLAAVLKHGVTVNAGSLDMLARVGEHA--PGH 128

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170
           ++ LR+NP   +      +   P S+ G    D       +      + G+  H      
Sbjct: 129 RVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVRQYGLKLVGIHMHIGSGVD 188

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEF 221
            +   S +   +          IE IS GGG+               Y  +    R +  
Sbjct: 189 -YGHLSQVCDAMVDLVASLGHDIEAISAGGGLSIPYRDGEPRVDVGHYFSQWDAARKRIE 247

Query: 222 SE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279
               ++V+I +EPG  +V    TL T V  ++   K+  + +D+     +   +     A
Sbjct: 248 RHLGHAVRIEIEPGRFLVAEAGTLVTEVQAVNRRPKHDFVLIDAGFNDLMRPSMYGSYHA 307

Query: 280 TIYPNTGP--------YTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324
                               + G  C +GD+F +              +IGD +   D  
Sbjct: 308 VSVHAPDGALPAGRPLVDIAIAGPLCESGDVFTQDAGGVVTHRKLAQPQIGDLLFLHDAG 367

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            Y  +  + +N   +    + +        R  +  +   
Sbjct: 368 AYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIGELLA 407


>gi|323483857|ref|ZP_08089234.1| diaminopimelate decarboxylase [Clostridium symbiosum WAL-14163]
 gi|323692859|ref|ZP_08107085.1| diaminopimelate decarboxylase [Clostridium symbiosum WAL-14673]
 gi|323402811|gb|EGA95132.1| diaminopimelate decarboxylase [Clostridium symbiosum WAL-14163]
 gi|323503088|gb|EGB18924.1| diaminopimelate decarboxylase [Clostridium symbiosum WAL-14673]
          Length = 421

 Score =  202 bits (513), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 67/391 (17%), Positives = 124/391 (31%), Gaps = 29/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TPY+L D++ +  N +        N G +   A+K      + D L +   G   SSL 
Sbjct: 20  PTPYHLYDEKGIRENAERLNKAFAWNKGFREYFAVKATPNPFIIDILKKTGSGADCSSLT 79

Query: 62  EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+M+    KF GE   ++       E          I  +  + ++  +     + + I 
Sbjct: 80  ELMMAKAMKFEGEKIMFSSNDTPPEEFKLADELGAIINLDDFTHIDFLEKTIGHIPETIS 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN---- 169
            R NP   +        N   S+ G   +        ++++     G+            
Sbjct: 140 CRYNPGGLFKISNDIMDNPGDSKYGMTTEQLFEAFKVLKAKGAKYFGIHAFLASNTVTNE 199

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
              +    + +   K        I +I+L GG+    +     +    + E   K   ++
Sbjct: 200 YYPMLAKILFEVAVKLKEETGADIRFINLSGGVGIPYRPGQEPNDIFAIGEGVRKVYEEV 259

Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                      Y E G  ++     L TT +      K  + VD+     +   +     
Sbjct: 260 LVPAGMGEVALYTELGRYMLGPYGCLVTTAIHEKHTHKEYIGVDACAVNLMRPAMYGAYH 319

Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        V IGD +   D   +  +    +
Sbjct: 320 HITVMGKEDRPCDHKYDVAGSLCENNDKFAIDRMLPKVDIGDILVIHDTGAHGFSMGYNY 379

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   DG+++ IR   +  DY+ 
Sbjct: 380 NGKLKSAELLLKEDGSVQMIRRAETPEDYFA 410


>gi|149185865|ref|ZP_01864180.1| diaminopimelate decarboxylase [Erythrobacter sp. SD-21]
 gi|148830426|gb|EDL48862.1| diaminopimelate decarboxylase [Erythrobacter sp. SD-21]
          Length = 420

 Score =  202 bits (513), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 51/375 (13%), Positives = 106/375 (28%), Gaps = 23/375 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           + TP Y+  +  L+ +               +  A+K      +   L     G    S 
Sbjct: 25  VGTPVYVYSRATLVRHARVFRDALSELKQPHIAFAVKANPNLAVLRLLANEGYGADVVSG 84

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQK--LH 115
            E+          E   ++   K        +          +  +  +    A++    
Sbjct: 85  GELTRALKAGMKPEDIVFSGVGKTHAELQQGLEEGIGQFNIESEEEGYELAAIARRFGKR 144

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-----SEIKNVNGLMFHNNCENK 170
               LR+NP V           +  ++ G             ++ + ++      +  ++
Sbjct: 145 AACALRVNPDVDARTHEKISTGKRENKFGVPLDRAAAIYTALAKEEGLDMRGIAVHIGSQ 204

Query: 171 SFLCFSAMLKNIE-----KEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEF 221
                       +     KE       +    LGGG+        +     ++   +   
Sbjct: 205 LADLEPLEAAFGKVGALIKELRAGGCSVTHADLGGGLGVPYKAGEELPAPAEYGAMVTRL 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES-- 278
           +  ++VQ+  EPG  I  N   L T V+ +   I+    +VD+++       +       
Sbjct: 265 TRDWNVQLMFEPGRVIAGNAGVLLTRVIRVKRGIERPFLVVDAAMNDLARPAMYGAWHDF 324

Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
             + P      A + G  C  GD F        +  GD   F     Y     + +N   
Sbjct: 325 EAVEPTGEKTIAHIVGPICETGDTFAMDRKIDVLAPGDLAVFRTAGAYGATMASSYNSRG 384

Query: 339 MPTIAVKNVDGTIKA 353
                + + D     
Sbjct: 385 FVAEVLVDGDRYAVV 399


>gi|312868979|ref|ZP_07729157.1| diaminopimelate decarboxylase [Lactobacillus oris PB013-T2-3]
 gi|311095482|gb|EFQ53748.1| diaminopimelate decarboxylase [Lactobacillus oris PB013-T2-3]
          Length = 438

 Score =  202 bits (513), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 66/398 (16%), Positives = 124/398 (31%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D  ++ + +     + +      ++  A K FAA  M+   +Q        S 
Sbjct: 31  GTPLVVYDVSQIRHQIRAFKRVFEANQVNYEVSYASKAFAAIAMYQVADQEGAHVDVVSG 90

Query: 61  YEVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F     +++   K  D  + AV +N   I+ +   ++        +L  +
Sbjct: 91  GEMYTALKAGFPLSHASFHGNNKSYDELVMAVKNNIGVIVVDNFYEIKLLNQVLTELDAR 150

Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNN 166
           +   LRI P +S          +  S+ G   +           + S    + GL  H  
Sbjct: 151 VKVMLRITPGISAHTNKYIQTGQVDSKFGFDLESGQADRALEAVLASPRMTMIGLHAHIG 210

Query: 167 CENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F      +++        +  Q + I++GGG                     
Sbjct: 211 SQIFELTGFEGVANKLVEVANHWQQRYDYQAQVINVGGGFGIRYTKDDQPLRPEEFVDAI 270

Query: 215 CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            + +K            I++EPG +IV        TV    +       V     +  ++
Sbjct: 271 IKAIKAAVASTALEMPAIWIEPGRSIVGPAGYNLYTVGSRKDLPGYRPFVTIDGGMGDNI 330

Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   E  T+              + G+ C +GDI  +       K GD ++  D   
Sbjct: 331 RPALYQAEYETVLARDPQAPLAEHVRLAGKYCESGDILSQDQALPKTKPGDVLAMLDTGA 390

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
           Y     + +N    P +       +   I   SY D  
Sbjct: 391 YGYAMASNYNRNPRPAVVFAENGHSQLVIERESYEDLV 428


>gi|126659265|ref|ZP_01730402.1| diaminopimelate decarboxylase [Cyanothece sp. CCY0110]
 gi|126619464|gb|EAZ90196.1| diaminopimelate decarboxylase [Cyanothece sp. CCY0110]
          Length = 464

 Score =  202 bits (513), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 53/402 (13%), Positives = 118/402 (29%), Gaps = 42/402 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK---NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P Y++D+  L           K       +++ A K ++   +   +     G    S
Sbjct: 55  GSPLYVLDETTLRTACSQYRDYFKTYYQGESQVIYASKAWSCLAVVGVIATENLGFDVVS 114

Query: 60  LYEV--------MLGH--EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109
             E+         LG+  ++   + + +     + E+   +    TII +   +L     
Sbjct: 115 GGELYTTKKSLTRLGYSSQEIAEKIYFHGNNKSEAELKEAIEVGCTIIVDNWLELETLVQ 174

Query: 110 KAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLM 162
                   I +RI P +              S+ G              + +I +  GL 
Sbjct: 175 L--GQSVPILIRITPGIECHTHEYIRTGHLDSKFGFDPNQLEAVFTYIKKHKIFDCRGLH 232

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRL- 218
            H   +         +   + +       +   +  +++GGG+     +       +   
Sbjct: 233 AHIGSQIFERQPHQDLAGVLVEWLKIGKEYGLNLSQLNIGGGLGICYTEQDDPPSIEEWV 292

Query: 219 ----------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VE 266
                      +  E    Q+  EPG +++ +      TV    E  +    +     + 
Sbjct: 293 KAVSEAVMKACKRCEIDLPQLIAEPGRSLIGSACVTAYTVGSRKEIPELRTYIAVDGGMS 352

Query: 267 AHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFED 322
            +                        T  + G+ C +GDI  +         GD +    
Sbjct: 353 DNPRPITYQSLYRVALGNRMSAEINETVTIAGKHCESGDIVIKDAQLPQTHPGDILVIMG 412

Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              YN +  + +N +  P   + N       ++  +Y+D   
Sbjct: 413 TGAYNYSMASNYNRLPRPAAIIVNQGEANLIVKRETYDDLIQ 454


>gi|257439612|ref|ZP_05615367.1| protein TabA [Faecalibacterium prausnitzii A2-165]
 gi|257197979|gb|EEU96263.1| protein TabA [Faecalibacterium prausnitzii A2-165]
          Length = 464

 Score =  202 bits (513), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 61/399 (15%), Positives = 116/399 (29%), Gaps = 35/399 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           + TP+++ D++ +  N          N G +   A+K      +   L +   G   SSL
Sbjct: 52  VPTPFHVYDEKGIRENARRINKAFSWNKGFREYFAVKALPNPIILQILKEEGCGVDCSSL 111

Query: 61  YEVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKA-----QK 113
            E+ML     F G    ++       ++         I  +  + ++     A       
Sbjct: 112 TELMLSEACGFTGSDIMFSSNQTPVEDMKKAYELGAYINLDDATMVDFLDRVAGIPENIF 171

Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNC 167
                G       S   F + D     ++ G   +  I+S  K +       G+      
Sbjct: 172 CRYNPGGTFQLGESEEGFQVMDKPG-DAKYGMTEEQMIDSYKKLMAKGAKNFGIHAFLAS 230

Query: 168 EN----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223
                         + +   +        I +I+L GG+    +    ++    + E   
Sbjct: 231 NTISDAYYPELAGILFQLAVRVQKATGAHIGYINLSGGVGIPYRPDQTENDIMAIGEGVR 290

Query: 224 KYSVQI-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY 272
           +   +I           + E G         L  T +      K  + +D+     +   
Sbjct: 291 RKFEEILVPAGMGDVAIFTEMGRFTTGPYGALVATAIHEKHIYKEYIGLDACAANLMRPA 350

Query: 273 LLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
           +                  +   V G  C   D F        + IGD I   D   +  
Sbjct: 351 MYGAYHHITVLGKENAPCDHKYDVVGGLCENNDKFAIDRMLPKIDIGDLIYIHDTGAHGS 410

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                +NG       +   DG+ + IR   +  DY+  L
Sbjct: 411 AMGYNYNGKLRSAEVLLCEDGSHRLIRRAETPRDYFATL 449


>gi|296170234|ref|ZP_06851827.1| diaminopimelate decarboxylase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295895110|gb|EFG74828.1| diaminopimelate decarboxylase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 472

 Score =  202 bits (513), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 56/406 (13%), Positives = 124/406 (30%), Gaps = 45/406 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +++D+    +            G  +  A K F    +   +++       S+  E
Sbjct: 64  GTPLFVVDEDDFRSRCRELATAFGG-GHNVCYAAKAFLCSEIARWVDEEGLSLDVSTGGE 122

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F  E   ++   K       AV      ++ ++++++ +    A +    + 
Sbjct: 123 LAVALHAGFPPERITFHGNNKSVAELTSAVKVGVGYVVLDSITEIERLDAIAGEAGVVQD 182

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G         +  +    ++   + GL  H   +
Sbjct: 183 VYVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMDAVRRVFATDHLRLVGLHSHIGSQ 242

Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F          +      F       +  + LGGG+  +            L  
Sbjct: 243 IFDVDGFEVAAHRVIGLLHHIADEFGVDKAGQVSTVDLGGGLGISYLGTDDPPPVAELAA 302

Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDS 263
                           + ++ +EPG AI    T     V  + +        +  V VD 
Sbjct: 303 KLTAIVGSESAAVGLPTPRLVVEPGRAIAGPGTITLYEVGTVKDVDVSSIAQRRYVSVDG 362

Query: 264 SVEAHVPDYLL---YQESATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318
            +  ++   L    Y        +  P T A + G+ C  GDI     +    ++ GD +
Sbjct: 363 GMSDNIRTALYDAQYDARLVSRASDAPATLARIVGKHCETGDIVVRDTWVPDDLRPGDLL 422

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +      Y  +  + +N I  P +       +   +R  + +D  +
Sbjct: 423 AVAATGAYCYSLSSRYNMICRPAVVAVRDGRSRLILRRETVDDLLS 468


>gi|87303422|ref|ZP_01086210.1| diaminopimelate decarboxylase [Synechococcus sp. WH 5701]
 gi|87282070|gb|EAQ74032.1| diaminopimelate decarboxylase [Synechococcus sp. WH 5701]
          Length = 474

 Score =  202 bits (513), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 53/395 (13%), Positives = 112/395 (28%), Gaps = 34/395 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAGVKL-LLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP Y++D+  L  +             G  L L A K  ++  +   +     G  + S
Sbjct: 67  GTPLYVLDEATLRASCRAYQEALAAHYPGPSLALYASKANSSLVLSALVASEGLGLDAVS 126

Query: 60  LYEVMLGHEK-FGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK- 116
             E++   +     E    +     D E+   +++  T++ +    L +  + A    + 
Sbjct: 127 AGELLTALQGGMPPERIVLHGNNKSDEELSLAVAHGVTVVVDNDHDLERLAEIAPAAGRV 186

Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCE 168
             + LR  P +              S+ G                    + GL  H   +
Sbjct: 187 VPLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQLESVLQRLAGCSWARLTGLHAHIGSQ 246

Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRL------- 218
                    +   +             +  +++GGG+             Q         
Sbjct: 247 IFELQPHRDLAGVMADALALARSLGHPVSDLNVGGGLGIRYVASDDPPTIQEWVKGVAEA 306

Query: 219 ----KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDY 272
                   +    ++  EPG ++V        T+    +    +  + VD  +  +    
Sbjct: 307 VVRACRERDLELPRLLCEPGRSLVATAGLTVYTIGSRKQIPGLRTYLSVDGGMSDNPRPI 366

Query: 273 LLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
                   +           T  V G+ C +GD+  +     P   GD +       YN 
Sbjct: 367 TYQSSYTAVLAERPTAVATETVTVAGKHCESGDVLLKDLALPPSSSGDLLVVFATGAYNA 426

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
           +  + +N I  P   + +        R    ++  
Sbjct: 427 SMASNYNRIPRPAAVLVHGGQAELVQRRERPDELL 461


>gi|329906987|ref|ZP_08274530.1| Diaminopimelate decarboxylase [Oxalobacteraceae bacterium IMCC9480]
 gi|327547120|gb|EGF31991.1| Diaminopimelate decarboxylase [Oxalobacteraceae bacterium IMCC9480]
          Length = 368

 Score =  202 bits (513), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 57/362 (15%), Positives = 111/362 (30%), Gaps = 31/362 (8%)

Query: 33  LLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAY--KDCEIDAV 89
             ++K  +   +   L+Q   G    S  E++         E   ++     +D    A+
Sbjct: 2   CYSVKSNSNLAVLHLLSQLGSGFDIVSSGELLRVLAAGGNPEKVIFSGVGKTRDEMQLAL 61

Query: 90  LSNCDTIIFNTVSQLNKFKDKA--QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKC 147
                     + S+L++    A   +L   I LR+NP+V              ++ G   
Sbjct: 62  SHGIACFNVESTSELHRLSAVAVDMQLTASISLRVNPNVDAKTHPYISTGLKENKFGVAI 121

Query: 148 KDKIESEIK-------NVNGLMFHNNCENKSFLCFSAMLKNIE---KEFGHFITQIEWIS 197
           +D +             V G+  H   +          L  +             I  + 
Sbjct: 122 EDALMIYRTAAGLPGIRVVGIDCHIGSQLLDDAPLLEALDKLIELIDVLAAEGIVIHHLD 181

Query: 198 LGGGIHFTDKDYPVKDFCQRLK--------EFSEKYSVQIY---LEPGEAIVTNTTTLNT 246
           +GGG+    +          L           +EKY         EPG +IV N   L T
Sbjct: 182 IGGGLGIDYEAEVPVAVGDYLTRLFRKIDLWRAEKYQGVPIKVLFEPGRSIVGNAGVLLT 241

Query: 247 TVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES---ATIYPNTGPYTAMVCGRSCLAGDI 302
            V  +   + KN  IVD+++   +   +        A +          V G  C +GD 
Sbjct: 242 RVEYLKPGSEKNFAIVDAAMNDLMRPAMYQAWHGVQAVVQRGGEAIVWDVVGPVCESGDW 301

Query: 303 FGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
                    ++ GD ++      Y +   + +N        + + + +    +  +    
Sbjct: 302 LARARTLS-LEEGDLLAIHSAGAYGMTMSSNYNTRGRAAEVMVDGNVSHLIRQRETPEQL 360

Query: 363 YN 364
           + 
Sbjct: 361 FA 362


>gi|109947141|ref|YP_664369.1| hypothetical protein Hac_0550 [Helicobacter acinonychis str.
           Sheeba]
 gi|109714362|emb|CAJ99370.1| lysA [Helicobacter acinonychis str. Sheeba]
          Length = 405

 Score =  202 bits (513), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 69/385 (17%), Positives = 124/385 (32%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP+Y  D  K+     +     K     +  ALK  +   +   L     G    SL E
Sbjct: 12  KTPFYFYDFDKIKQAFLSYKEAFKGRKSLICYALKANSNLSILSLLASLESGADCVSLGE 71

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++   K        +  N   +   +  +L   +  AQ L  K  
Sbjct: 72  IQRALKAGIKPYRIVFSGVGKSAFEIEQALKLNILFLNVESFMELQTIEKIAQSLGIKAR 131

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           +  RINP++              ++ G + K+ +E       S       + FH   +  
Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVEEKEALEMFLWAKKSAFLEPISVHFHIGSQLL 191

Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224
                      +    K        + +  +GGGI  + ++       D+ Q + +  + 
Sbjct: 192 DLEPIIEASQKVAKTAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILDSLQG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I  EPG +IV  +  L T VL       K  VIVD+ +   +   L + +      
Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHEIRVI 311

Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       V G  C + D F +      +K GD+++ E V  Y  +  + +N    
Sbjct: 312 TPRKGGKVSPCDVVGPVCESSDTFLKEVNLPELKPGDKLAIEKVGAYGSSMASQYNSRPK 371

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
                          ++ S  D + 
Sbjct: 372 LLELALEDHKIRVIRKKESLEDLWR 396


>gi|116617779|ref|YP_818150.1| diaminopimelate decarboxylase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116096626|gb|ABJ61777.1| diaminopimelate decarboxylase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 430

 Score =  202 bits (513), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 65/395 (16%), Positives = 119/395 (30%), Gaps = 33/395 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D   +   +     I +   V   +  A K FA   ++    Q        S 
Sbjct: 26  GTPLAVYDVTLIRKTMRAFKRIFEQENVPYVVSYAGKAFATKAIYQVAAQENIHADVVSG 85

Query: 61  YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F  +  ++N   K  D  + AV +   TII +   +L    +    + + 
Sbjct: 86  GELYTAIKADFPTQHLSFNGNNKSYDELVMAVENGVGTIIVDNFLELQLLSEITAEKNVI 145

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
           + I LRI+P +S          +  S+ G   +           I+    ++ GL  H  
Sbjct: 146 QDILLRISPGISAHTHEFISTGQQDSKFGFDLQTGQAKQAYDIAIKDNHLHLRGLHAHIG 205

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE------ 220
            +      F      +      +  Q E I+ GGG      D           +      
Sbjct: 206 SQIFDVTGFEKNAALLADTAYSWGWQPEVINTGGGFGIRYTDEDQPLPENEFADAIIRVL 265

Query: 221 -----FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDYL 273
                  +    +I++EPG +IV        TV    +         VD  +  ++   L
Sbjct: 266 KEKATQYDWAMPEIWIEPGRSIVGPAGQTLYTVGSRKDIPGIRNYLAVDGGMGDNIRPAL 325

Query: 274 LYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
                  +  N           + G+ C +GD+          K GD +S      Y   
Sbjct: 326 YQANYEAVLANQPNAKSEEIVRIAGKYCESGDVLVWQEELPATKPGDILSVLATGAYGYA 385

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             + +N    P +           +   ++    +
Sbjct: 386 MASNYNRNPRPAVVFVENGQHQVVVERETFEHMIS 420


>gi|300727749|ref|ZP_07061135.1| diaminopimelate decarboxylase [Prevotella bryantii B14]
 gi|299775037|gb|EFI71643.1| diaminopimelate decarboxylase [Prevotella bryantii B14]
          Length = 385

 Score =  202 bits (513), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 72/365 (19%), Positives = 124/365 (33%), Gaps = 26/365 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTAL-YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           I+TP+Y  D   L + L        K+    +  A+K  A   + + + Q   G    S 
Sbjct: 13  IRTPFYYYDTNILRDTLKAIKSETDKHEHFMVHYAIKANANPKVLNIICQAGLGVDCVSG 72

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHK- 116
            E+    E  F      +    K      +  + D   FN  ++ +L      AQ+  K 
Sbjct: 73  GEIERALEVGFPANKIVFAGVGKSDWEIELAIDKDIFCFNVESIPELEVINQIAQEKGKI 132

Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE 168
             +  RINP+V              ++ G          ++    +     GL FH   +
Sbjct: 133 AHVAFRINPNVGAHTHANITTGLAENKFGIAMCDMLTVIEEAKNMKNVKFVGLHFHIGSQ 192

Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-------DFCQRL 218
                 F      +  ++        ++E I++GGG+    +             F    
Sbjct: 193 ILDMGDFEALCNRINELQDTLERNNIKVEHINVGGGLGIDYEHPNQSPIPDFKSYFETYS 252

Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL--Y 275
           K    +   Q++ E G A+V    TL T  L + + + K   IVD+ +   +   L   Y
Sbjct: 253 KFLKLRNGQQVHFELGRAVVGQMGTLITKTLYVKQGSAKKFAIVDAGMTDLIRPALYQAY 312

Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
            +   I  N       V G  C + D+F +       + GD I+      Y     + +N
Sbjct: 313 HKIENISSNAPTEAYDVVGPICESSDVFAKSIDLNKCQRGDLIAIRSAGAYGEIMASQYN 372

Query: 336 GINMP 340
              MP
Sbjct: 373 CRKMP 377


>gi|153808224|ref|ZP_01960892.1| hypothetical protein BACCAC_02512 [Bacteroides caccae ATCC 43185]
 gi|149129127|gb|EDM20343.1| hypothetical protein BACCAC_02512 [Bacteroides caccae ATCC 43185]
          Length = 386

 Score =  202 bits (513), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 67/367 (18%), Positives = 125/367 (34%), Gaps = 28/367 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           ++TP+Y  D + L + L      + K     +  A+K  A   +   + +   G    S 
Sbjct: 13  LQTPFYYYDTKVLRDTLSAINQEVAKYPNYSVHYAVKANANPKVLTIIRESGMGADCVSG 72

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115
            E+       F      +    K      +        FN  ++ +L    + A  Q   
Sbjct: 73  GEIRAAIRAGFPASKIVFAGVGKADWEINLGLEYGIFCFNVESIPELEVINELAAAQNKI 132

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168
             +  RINP V              ++ G   +D        +E +     GL FH   +
Sbjct: 133 ANVAFRINPDVGAHTHANITTGLAENKFGISMQDMDKVIDVAVEMKHVKFIGLHFHIGSQ 192

Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
                 F+     +  ++ +       +E I++GGG+      +P +      K++   Y
Sbjct: 193 ILDMGDFIALCNRVNELQDKLEARRILVEHINVGGGLGIDYG-HPNRQPIPNFKDYFSTY 251

Query: 226 --------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL-- 274
                      ++ E G A+V    +L + VL + +  K    + D+ +   +   L   
Sbjct: 252 AGQLKLRPYQTLHFELGRAVVGQCGSLISKVLYVKQGAKKKFAILDAGMTDLIRPALYQA 311

Query: 275 YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
           Y +   I       +  V G  C + D+FG+      VK GD I+      Y     + +
Sbjct: 312 YHKMENITSEEPVESYDVVGPICESSDVFGKVIDLNKVKRGDLIALRSAGAYGEIMASGY 371

Query: 335 NGINMPT 341
           N   +P 
Sbjct: 372 NCRELPK 378


>gi|297192060|ref|ZP_06909458.1| diaminopimelate decarboxylase [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197719490|gb|EDY63398.1| diaminopimelate decarboxylase [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 463

 Score =  202 bits (513), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 60/398 (15%), Positives = 120/398 (30%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y +D+                    +  A K F +  +   L +        S  E
Sbjct: 63  GTPAYFLDEADFRARCRAWAAAFGK-DADVFYAGKAFLSRAIVRWLKEEGLNLDVCSGGE 121

Query: 63  VMLGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +          E  A++   K  +    AV +    I+ ++  ++ +    AQ+  K+  
Sbjct: 122 LATALAAGMPAERIAFHGNNKSVEEIERAVEAGVGRIVLDSFQEIVRVAHIAQRAGKRQR 181

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
             +R+   V               + G            +  ++ +   + G+  H   +
Sbjct: 182 VQIRVTVGVEAHTHEFIATAHEDQKFGIALAGGQAAEAVRRALKLDGLELIGIHSHIGSQ 241

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F      +++ + +       ++  I LGGG+               + +   +
Sbjct: 242 IFDMAGFEVSARRVVQLLAEVRDEHGVELPEIDLGGGLGIAYTSEDDPREPHEIAKSLTE 301

Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271
                         +I +EPG AIV  T      V  +      +  V VD  +  ++  
Sbjct: 302 IVTRECEAAGLRPPRISVEPGRAIVGPTAFTLYEVGTVKPLEGLRTYVSVDGGMSDNIRT 361

Query: 272 YLLYQESATIYPNTGPYTAM----VCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326
            L   E +    +     A     V G+ C +GDI  +  F    +  GD I+      Y
Sbjct: 362 ALYDAEYSVALVSRTSEAAPMLSRVVGKHCESGDIVVKDAFLPADLAPGDLIAVPATGAY 421

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N    P +           +R  +  D   
Sbjct: 422 CRSMASNYNHALRPPVVAVADGEARVIVRRETEEDLLR 459


>gi|34499212|ref|NP_903427.1| diaminopimelate decarboxylase [Chromobacterium violaceum ATCC
           12472]
 gi|34105063|gb|AAQ61419.1| diaminopimelate decarboxylase [Chromobacterium violaceum ATCC
           12472]
          Length = 409

 Score =  202 bits (513), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 60/398 (15%), Positives = 118/398 (29%), Gaps = 44/398 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++     +   +             +  A K  +   +   +        + SL E
Sbjct: 17  GTPLWVYRADTIRERIAELK-AFD----TIRYAQKANSNTHILRLMRAEGVKVDAVSLGE 71

Query: 63  VMLGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
           +                  +     D    A +   +  +   ++  L +  + A     
Sbjct: 72  IERALAAGYRGGGEPSDIVFTADVLDRPTLAKVIAENIPVNAGSIDMLRQLGEAA--PGH 129

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENK 170
            + LRINP   +      +     S+ G            +      + G+  H      
Sbjct: 130 PVWLRINPGFGHGHSQKTNTGGENSKHGIWHGDLDEALQAVRRFNLRLIGIHMHIGSGVD 189

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEF 221
            +     +   + +        IE IS GGG+               Y       R +  
Sbjct: 190 -YGHLEQVCGAMVELVARLECDIEAISAGGGLSIPYRDGDARIDTAHYFQLWDAARRRIE 248

Query: 222 SE-KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES- 278
           +   + VQ+ +EPG  +V     L + V  + +   ++ V+VD+     +   L      
Sbjct: 249 AHLGHPVQLEIEPGRFLVAEAGALLSEVRAVKNMGSRHFVLVDAGFNDLMRPSLYGSYHR 308

Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                A     TG    +V G  C +GD+F        E     P ++GD + F D   Y
Sbjct: 309 ISLLDADGAEKTGAVDTVVAGPLCESGDVFTQQEGGTVETRPLPPAQVGDLMVFHDAGAY 368

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
                + +N   +   A+ +     +  R  +  +   
Sbjct: 369 GATMSSNYNSRPLLAEALVDGGAVRQIRRRQTIAELLA 406


>gi|198275986|ref|ZP_03208517.1| hypothetical protein BACPLE_02169 [Bacteroides plebeius DSM 17135]
 gi|198271615|gb|EDY95885.1| hypothetical protein BACPLE_02169 [Bacteroides plebeius DSM 17135]
          Length = 386

 Score =  202 bits (513), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 75/366 (20%), Positives = 126/366 (34%), Gaps = 28/366 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALY-IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           ++TP+Y  D   L   L+       K     +  A+K  A   +   + +   G    S 
Sbjct: 13  LETPFYYYDTNLLRETLNKIKEEAGKYNKFCVHYAVKANANPKVLGIIRESGLGADCVSG 72

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHKK 117
            E+       F      Y    K  +   +  + D   FN  ++ +L    + A   +K 
Sbjct: 73  GEIKAAIKAGFPASKIVYAGVGKTDKEINLGLDYDIFCFNVESIPELEVINELAAAKNKI 132

Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168
                RINP V              ++ G   +D        +E +     GL FH   +
Sbjct: 133 ARVAFRINPDVGAHTHANITTGLAENKFGISIQDMDRVIDLALEMKNVKFVGLHFHIGSQ 192

Query: 169 NKSFLCFSAML----KNIEKEFGHFITQIEWISLGGGIHFTDKD---YPVKDFCQRLKEF 221
                 F A+     +  EK F   I  +E I++GGG+          P+ DF +    +
Sbjct: 193 ILDMGDFVALCNRVNELQEKLFARQII-VEHINVGGGLGIDYAHPNRQPIPDFAEYFATY 251

Query: 222 SEKY----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL-- 274
            +         ++ E G A+V    +L T V  + +   K   IVD  +   +   L   
Sbjct: 252 HKHLRLRPQQTLHFELGRAVVGQCGSLITKVTYVKQGTNKQFAIVDGGMTDLIRPALYQA 311

Query: 275 YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
           Y +   +       T  V G  C + D+FG+      V  GD I+      Y     + +
Sbjct: 312 YHKIENLTSEEPVETYDVVGPICESSDVFGKAIDLNKVHRGDLIALRSAGAYGEIMASGY 371

Query: 335 NGINMP 340
           N   +P
Sbjct: 372 NCRPLP 377


>gi|299140571|ref|ZP_07033709.1| diaminopimelate decarboxylase [Prevotella oris C735]
 gi|298577537|gb|EFI49405.1| diaminopimelate decarboxylase [Prevotella oris C735]
          Length = 386

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 64/366 (17%), Positives = 121/366 (33%), Gaps = 26/366 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTAL-YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           + TP+Y  D + L   L        K++   +  A+K  A   +   +++   G    S 
Sbjct: 14  LSTPFYYYDTELLRRTLTEIKTEANKHSNYIVHYAIKANANTKLLKIIHEAGLGADCVSG 73

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHK- 116
            E+    E  F      Y    K      +  + +   FN  ++ +L    + A    K 
Sbjct: 74  GEIKAALEAGFPASEIVYAGVGKSDWEINLGLDNEIFCFNVESIPELEVINELAGTKGKV 133

Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168
             +  RINP V              ++ G   +D        +  +     GL FH   +
Sbjct: 134 ANVAFRINPDVGAHTHSNITTGLAENKFGIAMRDIDSIINRALHMKHVKFIGLHFHIGSQ 193

Query: 169 NKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ-------RL 218
                 F+     + +++ +       +  I++GGG+    +                  
Sbjct: 194 ILDMSDFVALCRRINDLQNQLEKHGISVRHINVGGGLGIDYEHPDKSAIPDFKAYFDTYA 253

Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLY-- 275
           K    ++  Q++ E G A+V    +L T  L + + + K   IVD+ +   +   L    
Sbjct: 254 KYLKLRHGQQLHFELGRAVVGQCGSLITRTLYVKQGDTKQFAIVDAGMTELIRPALYQAV 313

Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
            +   I  N       V G  C   D+F +         GD ++      Y     + +N
Sbjct: 314 HKIENISSNRSTEIYDVVGPICETSDVFAKDVLLNKTYRGDLLAIRSAGAYGEIMASQYN 373

Query: 336 GINMPT 341
              +P 
Sbjct: 374 CRKLPK 379


>gi|330827982|ref|YP_004390934.1| diaminopimelate decarboxylase [Aeromonas veronii B565]
 gi|328803118|gb|AEB48317.1| Diaminopimelate decarboxylase [Aeromonas veronii B565]
          Length = 416

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 56/385 (14%), Positives = 111/385 (28%), Gaps = 24/385 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +         +    +  A+K  +   + + L +   G    S  E
Sbjct: 27  GTPLYVYSRATLERHWHAFDKAAGDIPHLICYAVKANSNLALLNLLARLGSGFDIVSGGE 86

Query: 63  V--MLGHEKFGGETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +  +L       +     VA  + E+  A+          + ++L +    A  + KK  
Sbjct: 87  LSRVLAAGGDPAKVVFSGVAKSEAEMRLALEKEILCFNLESEAELERLNRVAGNMGKKAR 146

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENK 170
             +R+NP +              ++ G   +                + G+  H   +  
Sbjct: 147 VSVRVNPDIDAGTHPYISTGLKQNKFGIPIELAPAIYRKAAAMANIEIVGVDCHIGSQLT 206

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEK 224
               F         +          I  + +GGG+              + + LK+    
Sbjct: 207 ELNPFMEAADKLLRLIDGLAAEGIHIHHLDVGGGLGVNYGSEQPPHPTEYAEALKQKLAG 266

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATIYP 283
             + +  EPG AIV N   L T V  +          +D+ +   +   L       I  
Sbjct: 267 RDLTLLFEPGRAIVANAGVLLTRVEYLKPGETRNFALIDAGMNDMLRPSLYGAWMNIIEV 326

Query: 284 NT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
           ++     P    V G  C  GD  G+      +  G  ++      Y     + +N    
Sbjct: 327 DSRAGHAPAIYDVVGPVCETGDFLGKERTLA-IAEGSLLAVRSAGAYGFTMSSNYNTRPR 385

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
               + +              D + 
Sbjct: 386 AAEVLVDGAEAHLIREREQLADLWR 410


>gi|284164081|ref|YP_003402360.1| diaminopimelate decarboxylase [Haloterrigena turkmenica DSM 5511]
 gi|284013736|gb|ADB59687.1| diaminopimelate decarboxylase [Haloterrigena turkmenica DSM 5511]
          Length = 466

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 62/408 (15%), Positives = 127/408 (31%), Gaps = 54/408 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y +D +++  N             +++ A+K  A   + +TL++   G   +S  E
Sbjct: 29  GSPLYALDLERVRENYRRLASAF--PDAEIMYAVKANALDEVLETLHEEGAGLECASAGE 86

Query: 63  VMLGHE---------KFGGETHAYNVAYKDCEIDAVLSNCD-----TIIFNTVSQLNKFK 108
           V                G + H   V     ++D V+   +     TI       +++ +
Sbjct: 87  VKRALAAIESSDRSDGSGADVHYTAVNPPARDLDWVVDAWEDHPELTITVGAEDTIDRLE 146

Query: 109 DKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE------SEIKNVNGLM 162
           ++      ++ LR+NP +              ++ G   +  ++          +V G+ 
Sbjct: 147 ER--GYDGRLCLRVNPGIDAGHHEKV-KTGAAAKFGVPIERAVDVLTNAADRGFDVVGVH 203

Query: 163 FHNNCENKSFL------CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVK 212
            H      S          + M +            +E++ +GGG             ++
Sbjct: 204 AHVGSGVSSDQLDDHRAFVARMGELATDVDEALEGDLEFVDVGGGFGVPYRESEAPLDLE 263

Query: 213 DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPD 271
              +  +E       ++ +EPG   V +   L T V  I E      V VD+ +   +  
Sbjct: 264 AVAEATREALGDVDARLTIEPGRYFVADAGVLLTEVNTIKEARDTLAVGVDAGMTTLLRP 323

Query: 272 YLLYQESATIYPNTGPY------------------TAMVCGRSCLAGDIFGEFHFEKPVK 313
            +                                    + G  C +GD+F         +
Sbjct: 324 AMYDAYHPIRNLTADREADSSDETRNSADTGRETVPQTIAGPICESGDVFCSDRELPASR 383

Query: 314 IGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361
             D ++  +   Y     N +N    P   V + D    A R  + +D
Sbjct: 384 RTDVLAIGNAGAYGYEMANQYNSRPRPASVVIDGDDVRLARRRETVDD 431


>gi|282896303|ref|ZP_06304325.1| Diaminopimelate decarboxylase [Raphidiopsis brookii D9]
 gi|281198799|gb|EFA73678.1| Diaminopimelate decarboxylase [Raphidiopsis brookii D9]
          Length = 464

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 44/400 (11%), Positives = 109/400 (27%), Gaps = 38/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P Y++D+  +                   ++L A K +    +   +     G    S
Sbjct: 56  GSPLYILDELTVRTACQQYRDAFTKYYKGHSQVLYASKAWNCLAVCAIVASEGLGIDVVS 115

Query: 60  LYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKK 117
             E+          +    +   K              I+ +   +L       ++  + 
Sbjct: 116 GGELYTALTAGMSPDKIYLHGNNKSHHELMFAVETGCTIVVDNWYELRTLVAILEQDEQD 175

Query: 118 IG------LRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFH 164
                   LR+ P +              S+ G    D         +    +  G+  H
Sbjct: 176 QAKKIRIMLRLTPGIECHTHEYIRTGHLDSKFGFDPNDLPEVFSFVSQQSRLHCVGVHAH 235

Query: 165 NNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKD-------- 213
              +         +   + +       +  ++  +++GGG+     +             
Sbjct: 236 IGSQIFERQPHRDLAAVMVQWLREAKQYNLELAELNVGGGLGIKYTESDDPPSIEEWSRA 295

Query: 214 FCQRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268
            C+ ++    + +    ++  EPG +++        T+            V     +  +
Sbjct: 296 ICEVVQNVCAEENLPLPKLLCEPGRSLIATGGVTAYTIGSTKTIPDIRTYVTIDGGMSDN 355

Query: 269 VPDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
                       +  N        T  + G+ C +GDI  +       + GD +      
Sbjct: 356 PRPITYQSVYRAVVANKMSAPLTETVTLAGKHCESGDILIKNVQLPKTEPGDVLVVMTTG 415

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            YN +  + +N +  P   +         ++  +Y D   
Sbjct: 416 AYNYSMASNYNRLPRPAAVLVANGEANLILQRETYQDIIR 455


>gi|302558388|ref|ZP_07310730.1| diaminopimelate decarboxylase [Streptomyces griseoflavus Tu4000]
 gi|302476006|gb|EFL39099.1| diaminopimelate decarboxylase [Streptomyces griseoflavus Tu4000]
          Length = 463

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 62/398 (15%), Positives = 118/398 (29%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y +D+        +      +    +  A K F +  +   L++        S  E
Sbjct: 63  GTPAYFLDEDDFRARARSWRTAFGD-DADVFYAGKAFLSRAVVRWLHEEGLNLDVCSGGE 121

Query: 63  VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +          E  A++   K  D    AV +    I+ ++  ++ +    AQ+L  +  
Sbjct: 122 LATALSAGMPAERIAFHGNNKSTDEIRRAVEAGVGRIVLDSFQEIVRVAHIAQELGTRQR 181

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
             +RI   V               + G            +  +  +   + G+  H   +
Sbjct: 182 VQIRITVGVEAHTHEFIATAHEDQKFGIPLAGGQAAEAVRRALTLDGLELIGIHSHIGSQ 241

Query: 169 NKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F      +             ++  I LGGG+               + +   +
Sbjct: 242 IFDMSGFEVAAHRVVGLLRDIRDEHGVELPEIDLGGGLGIAYTSDDDPREPHEIAKALTE 301

Query: 225 YSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271
              +             +EPG AIV  T      V  +      +  V VD  +  ++  
Sbjct: 302 IVTRECDAARLATPRISVEPGRAIVGPTAFTLYEVGTVKPLDGLRTYVSVDGGMSDNIRT 361

Query: 272 YLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326
            L   E     A+      P    V G+ C +GDI  +  F    +  GD I+      Y
Sbjct: 362 ALYDAEYSVALASRVSEAEPMLCRVVGKHCESGDIVVKDAFLPGDLAPGDLIAVPATGAY 421

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N +  P +           +R  +  D   
Sbjct: 422 CRSMASNYNHVVRPPVVAVRDGEARVIVRRETEEDLLR 459


>gi|210612474|ref|ZP_03289332.1| hypothetical protein CLONEX_01533 [Clostridium nexile DSM 1787]
 gi|210151582|gb|EEA82589.1| hypothetical protein CLONEX_01533 [Clostridium nexile DSM 1787]
          Length = 428

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 65/391 (16%), Positives = 120/391 (30%), Gaps = 29/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +  N+         N G K   A+K      + + L +Y  G   SS  
Sbjct: 26  PTPFHLYDERGIRENVKALKEAFAWNKGYKEYFAVKATPNPFLINILREYGCGCDCSSYT 85

Query: 62  EVML--GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+ML       G +    + A    E          I  +  + +   ++    + + I 
Sbjct: 86  ELMLSEALGAVGKDIMFSSNATPAEEFVYADKLGAIINLDDFTHIEFLENAIGHIPETIS 145

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN---- 169
            R NP   +        N   ++ G   +        ++++     GL            
Sbjct: 146 CRYNPGGLFKISNDIMDNPGDAKYGMTTEQLFEAFKILKAKGAKEFGLHAFLASNTVTNE 205

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
              +    + +   K        I++I+L GGI    +     +  + + E   K   + 
Sbjct: 206 YYPMLAKILFEVAVKLQKETGAHIKFINLSGGIGIPYRPDQEPNDIRAIGEGVRKVYEEV 265

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     IY E G  ++     L T  +      K  +  D+     +   +     
Sbjct: 266 LVPAGMGDVAIYTELGRYMMGPYGCLVTKAVHEKHTYKEYIGCDACAVNLMRPAMYGAYH 325

Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   + G  C   D F        + IGD +   D   +       +
Sbjct: 326 HITVMGKEDAPCDHKYDITGSLCENNDKFAVDRMLPKIDIGDLLVIHDTGAHGFAMGYNY 385

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   DGT K IR   +  DY+ 
Sbjct: 386 NGKLKSAEILLQEDGTPKLIRRAETPADYFA 416


>gi|238923829|ref|YP_002937345.1| diaminopimelate decarboxylase [Eubacterium rectale ATCC 33656]
 gi|238875504|gb|ACR75211.1| diaminopimelate decarboxylase [Eubacterium rectale ATCC 33656]
 gi|291524569|emb|CBK90156.1| Diaminopimelate decarboxylase [Eubacterium rectale DSM 17629]
 gi|291527996|emb|CBK93582.1| Diaminopimelate decarboxylase [Eubacterium rectale M104/1]
          Length = 422

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 63/391 (16%), Positives = 118/391 (30%), Gaps = 29/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D+  +  N          N G +   A+K      +   L  Y  G   SS  
Sbjct: 20  PTPFHLYDEAGIRANAQAVKDAFAWNPGFREYFAVKATPNPYLLKILKDYDMGCDCSSYT 79

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+ML     F GE   ++       E          I  +  + ++  ++    + + I 
Sbjct: 80  ELMLAKSCGFDGEHIMFSSNDTPAEEFAYADKLGAIINLDDFTHIDFLEETIGHIPETIS 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN---- 169
            R NP   ++       N   S+ G   +        ++S+     G+            
Sbjct: 140 CRYNPGGVFTLSNGIMDNPGDSKYGMTKEQLFEAFKILKSKGAKYFGVHAFLASNTVTNE 199

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                   + + + +        I +++L GG+    K     +    +     K   + 
Sbjct: 200 YYPQLAKELFELVVELKNETGCDIRFVNLSGGVGVAYKPDQTPNDISVIGAGVHKVYDEV 259

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     IY E G  ++     L T  +      K  + VD+     +   +     
Sbjct: 260 LVPAGMGDVAIYTEMGRFMMAPYGCLVTKAIHEKHIYKEYIGVDACAANLMRPAIYGSYH 319

Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +T  V G  C   D F        + +GD +   D   +  +    +
Sbjct: 320 HITVLGKEDAPCDHTYDVVGSLCENCDKFAIDRQLPKIDMGDYLVIHDTGAHGFSMGYNY 379

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   +G  K IR   +  DY+ 
Sbjct: 380 NGRLRSAEILLESNGEAKLIRRAETPADYFA 410


>gi|281357096|ref|ZP_06243586.1| diaminopimelate decarboxylase [Victivallis vadensis ATCC BAA-548]
 gi|281316654|gb|EFB00678.1| diaminopimelate decarboxylase [Victivallis vadensis ATCC BAA-548]
          Length = 406

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 70/383 (18%), Positives = 120/383 (31%), Gaps = 25/383 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D   ++              +K+  ALK     G+   L     G  + S  E
Sbjct: 15  GTPLYVYDGDLVVERYRDLFKFIPYDRLKIHYALKANYNPGLLTLLRDAGAGLDTVSPGE 74

Query: 63  VMLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           V+   +  F  E   Y      D E + VL+    +   ++S+L K     Q    K+ L
Sbjct: 75  VVYALKLGFPRERIIYTANNMTDAEFEQVLAMDVVMNIGSLSRLRKIAK--QHPGMKLCL 132

Query: 121 RINPSVSYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNCENKSFLC 174
           R NP V              ++ G      E+ K  ++     V GL  H     +    
Sbjct: 133 RFNPDVCDGDNEKTMTGGDLTKFGILLESVEEVKALVKEGNLRVIGLHEHTGSGLQHAES 192

Query: 175 FSAMLK-NIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEKYSVQ- 228
               +   +          +E++  GGG     K              +      ++ + 
Sbjct: 193 VYQSMDNLMAIATPENFPNLEFLDFGGGFKVPYKPEERRVDYVAMGAEIARRFTAFTERY 252

Query: 229 -----IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE-AHVPDYLLYQESATIY 282
                +  EPG+ +V     L T V  I  N   ++    S     +   L         
Sbjct: 253 GRRLDMLFEPGKYMVAEAGHLLTEVNTIKCNRTRVIAGCDSGFPQLIRPVLYGAYHQIRN 312

Query: 283 PNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            +     P    VCG  C  GD F E      ++  D ++  +   Y  +    +N   M
Sbjct: 313 LSNPAGKPVVYDVCGNICETGDRFAEQRELPEIREYDILAVGNAGAYCYSMGGVYNLRPM 372

Query: 340 PTIAVKNVDGTIKAIREFSYNDY 362
           P   V +    +   R+ +  + 
Sbjct: 373 PGEIVVSGGKVVSERRKLTTEEL 395


>gi|319892399|ref|YP_004149274.1| Diaminopimelate decarboxylase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317162095|gb|ADV05638.1| Diaminopimelate decarboxylase [Staphylococcus pseudintermedius
           HKU10-03]
          Length = 421

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 64/394 (16%), Positives = 121/394 (30%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D+ ++   +       +    G  L  A K F    M     +        S 
Sbjct: 26  GTPTIVYDEAQIRQQMRRYHSAFQQNDIGYVLSYASKAFTCLQMVKLAAEEDFELDVVSE 85

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    E  F  +   ++   K          S     + + + +++  +  A K    
Sbjct: 86  GELYTALEAGFDPQRIHFHGNNKTKHEIRYALESGIGYFVVDALDEIDLIEQYATKPVD- 144

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
           + LR+NP V           +  S+ G         E  +    +    + G+ FH   +
Sbjct: 145 VLLRVNPGVEAHTHEFIQTGQEKSKFGLSLKHGLALEAVEKIRNTNNIVLKGIHFHIGSQ 204

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR--------LKE 220
            +         K +          I+ ++LGGG      +       +         +K 
Sbjct: 205 IEETTGMIETAKMVLNWLDEHAITIDLLNLGGGFSAQYVEGDQSFDIEAGITEIVQAIKA 264

Query: 221 FSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274
             ++    I    +EPG +IV         V  I +       V     +  H+   L  
Sbjct: 265 ECQQLKYPIPTLSIEPGRSIVAEAGVTLYEVGTIKDIPGVNKYVSIDGGMSDHIRTALYD 324

Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331
             YQ        T   T  + G+ C +GDI          VK GD ++      Y+ +  
Sbjct: 325 AKYQALLINRNETPDETVTIAGKLCESGDIIIHEAKLPSSVKRGDYLAILATGAYHYSMA 384

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + +N +  P++         + ++  S      N
Sbjct: 385 SNYNQMQKPSVFFVKDGKAREVVKRQSLRQLIIN 418


>gi|317503132|ref|ZP_07961202.1| diaminopimelate decarboxylase [Prevotella salivae DSM 15606]
 gi|315665748|gb|EFV05345.1| diaminopimelate decarboxylase [Prevotella salivae DSM 15606]
          Length = 385

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 72/371 (19%), Positives = 126/371 (33%), Gaps = 26/371 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTAL-YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+Y  D + L   L T      K+ G  +  A+K  A   +   + +   G    S  
Sbjct: 15  PTPFYYYDTKLLQATLHTISTEAVKHKGFHVHYAVKANANPTLLRMIQEAGLGADCVSGG 74

Query: 62  EVML-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHK-- 116
           E+       F      Y    K+     +  + D   FN  ++ +L      A    K  
Sbjct: 75  EIKASIAAGFKPSQIVYAGVGKNDWEINLGLDQDIFCFNVESLPELEVINQLAACKSKIA 134

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCEN 169
            I LRINP++              ++ G          +   + +   + GL FH   + 
Sbjct: 135 HIALRINPNIGAHTHSNIVTGLAENKFGIAMHDMHDLIERATKMKNVKLIGLHFHIGSQI 194

Query: 170 KSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY------PVKDFCQRLKE 220
                F  + K I   + +       +E I++GGG+    +          K +      
Sbjct: 195 LDMTDFIKLCKRINELQDQLAEHGITLEHINVGGGLGIDYEHPQAHSIPDFKTYFDTFDT 254

Query: 221 FSEKYSVQ-IYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES 278
             + Y  Q I+ E G ++V    +L T VL + +   K  VIVD+ +   +   L +   
Sbjct: 255 HLKHYPQQQIHFELGRSVVGQCGSLITRVLYVKKGTNKQFVIVDAGMTELIRPALYHATH 314

Query: 279 A--TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
               +       T  V G  C + D+F +       + GD ++      Y     + +N 
Sbjct: 315 HIENLNSTMEEETYDVVGPICESSDVFAKDIQLNKTQRGDLLAIRSAGAYGEIMASGYNC 374

Query: 337 INMPTIAVKNV 347
             +P     N 
Sbjct: 375 RELPKSYFTND 385


>gi|85707825|ref|ZP_01038891.1| Orn/DAP/Arg decarboxylase, family 2 [Erythrobacter sp. NAP1]
 gi|85689359|gb|EAQ29362.1| Orn/DAP/Arg decarboxylase, family 2 [Erythrobacter sp. NAP1]
          Length = 419

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 56/375 (14%), Positives = 100/375 (26%), Gaps = 23/375 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           + TP Y+  +  L  +               +  A+K      +   L++   G    S+
Sbjct: 25  VGTPVYVYSRATLERHARVFREALDAVPDKLIAFAVKSNPNLAVLKVLSREGYGADVVSV 84

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFN----TVSQLNKFKDKAQKLH 115
            E+          E   ++   K               FN                    
Sbjct: 85  GEMRRALAAGMPPEKIVFSGVGKTRAELQAALEAGIGQFNIESEEEGLELAELAAEMGRE 144

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168
            +  LRINP V           +  ++ G                E   + G+  H   +
Sbjct: 145 AQCALRINPDVDAGTHDKISTGKADNKFGVPISQAGQIFGKLAGQEGVRLRGVAVHIGSQ 204

Query: 169 NKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEF 221
                        +             I  + LGGG+        +     ++   +   
Sbjct: 205 LGELAPLERAFTKLGELVTSLRGAGHTITHVDLGGGLGVPYRAGEELPSPAEYGAMVARV 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
           ++ + V +  EPG  I  N   L T V+ +        VIVD+++       L       
Sbjct: 265 TKDWGVSLIFEPGRVIAGNAGVLLTRVVRVKRGIKDPFVIVDAAMNDLARPALYGAYHDF 324

Query: 281 IYPNT--GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
           +         TA + G  C  GD F        ++ GD   F     Y     + +N   
Sbjct: 325 VAVQPRGSDMTANIVGPICETGDTFAMGRLTDKLESGDLAVFRTAGAYGATMASSYNSRG 384

Query: 339 MPTIAVKNVDGTIKA 353
                + + D     
Sbjct: 385 FVAEVLVDGDKFAVV 399


>gi|330815285|ref|YP_004358990.1| Diaminopimelate decarboxylase [Burkholderia gladioli BSR3]
 gi|327367678|gb|AEA59034.1| Diaminopimelate decarboxylase [Burkholderia gladioli BSR3]
          Length = 423

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 56/387 (14%), Positives = 117/387 (30%), Gaps = 27/387 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L           +     + +A+K  +  G+ +   +   G    S  E
Sbjct: 28  DTPLYVYSRAALTAAYQAYAQACEGRRAAIHVAVKANSNLGVLNVFARLGAGFDIVSGGE 87

Query: 63  VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +          E   ++   K  +    A+ +        ++ +L++  + A  L     
Sbjct: 88  LARVLAAGGKAENVVFSGVGKSAEEMRVALQAGVKCFNVESIPELDRLDEVAGSLGKRAP 147

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    +   S           V G+  H   +  
Sbjct: 148 VSLRVNPDVDPKTHPYISTGLKANKFGVAFAEARASYRAAAALPNLQVVGIDCHIGSQIT 207

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               +   L    ++ ++       I  + +GGG+  T  D       + +     +   
Sbjct: 208 ELSPYLDALDKVLDLVEQIEADGIPIHHVDIGGGLGITYADETPPAIGEFVAALFARLDA 267

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESAT 280
                 ++Y EPG ++  N   L T V  +     KN  IVD+++       +     A 
Sbjct: 268 RGHGQREVYFEPGRSLTGNAGILLTRVEFLKPGEEKNFAIVDAAMNDLARPAMYEAYHAI 327

Query: 281 IYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
           +              V G  C +GD  G       +  G+ ++      Y     + +N 
Sbjct: 328 VPVKEQSGHASAVYDVVGPVCESGDWLGRERTLA-IAPGELLAIRSAGAYGFVMSSNYNT 386

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYY 363
                  + +           +    +
Sbjct: 387 RARAAEVLVDGVNAYLVRPRETIESLF 413


>gi|226322592|ref|ZP_03798110.1| hypothetical protein COPCOM_00364 [Coprococcus comes ATCC 27758]
 gi|225208929|gb|EEG91283.1| hypothetical protein COPCOM_00364 [Coprococcus comes ATCC 27758]
          Length = 436

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 65/391 (16%), Positives = 124/391 (31%), Gaps = 29/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +  N+         N G K   A+K      + + L +Y  G   SS  
Sbjct: 23  PTPFHLYDEKGIRENVKALKEAFAWNKGYKEYFAVKATPNPYILNILKEYGCGCDCSSYT 82

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDA-VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++       GE   ++      E  A        I  + ++ ++  +    K+ + I 
Sbjct: 83  ELLMSESVGQVGENIMFSSNDTPAEEFALADKLGAIINLDDITHIDFLEKTIGKIPETIS 142

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN---- 169
            R NP   +        N   ++ G   +        ++S+     G+            
Sbjct: 143 CRYNPGGLFKISNSIMDNPGDAKYGMTTEQIFEAFKILKSKGAKEFGIHAFLASNTVTNE 202

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                   + +   K        I++I+L GG+    K     +  + + E   K   + 
Sbjct: 203 YYPTLARTLFEVAVKLQKETGVHIKFINLSGGVGIPYKPDQEPNDIKVIGEGVRKVYEEV 262

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     IY E G  ++     L T  +      K  + VD+     +   +     
Sbjct: 263 LVPAGMGDVAIYTELGRFMLGPYGCLVTKAIHEKHTHKEYIGVDACAANLMRPAMYGAYH 322

Query: 279 ATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +T  V G  C   D F        + +GD +   D   +  +    +
Sbjct: 323 HITVMGKENEPCDHTYDVTGSLCENNDKFAIDRQLPKIDMGDLLVIHDTGAHGFSMGYNY 382

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   DG  + IR   +  DY+ 
Sbjct: 383 NGRLRSAEVLLKEDGGTQLIRRAETPMDYFA 413


>gi|332297300|ref|YP_004439222.1| Diaminopimelate decarboxylase [Treponema brennaborense DSM 12168]
 gi|332180403|gb|AEE16091.1| Diaminopimelate decarboxylase [Treponema brennaborense DSM 12168]
          Length = 422

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 64/392 (16%), Positives = 114/392 (29%), Gaps = 28/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+Y+ D++ +  N+             K   A+K      +   L     G   SSL 
Sbjct: 21  GTPFYIYDERAIRENMRRFTKAFGIFPSFKEYFAVKACPNPYILKILASEGAGADCSSLP 80

Query: 62  EVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           E++L       GE   +       +     +    +I         + +KA     ++  
Sbjct: 81  ELILAEKAGMSGENVMFTSNETPEKEYIYANLKGNVINLDDISHIAYLEKALGALPELLC 140

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSFLC 174
                    +          ++ G   +   E+     N      GL         +   
Sbjct: 141 FRYNPGPLKEGNALIGKPEEAKYGLTREQIFEAYRVCKNKGVKRFGLHTMVASNELNPDY 200

Query: 175 FSAMLKN----IEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYS 226
           F    +       +       +IE++ LGGGI        K    +   QR++   ++  
Sbjct: 201 FVETAELLFTLAAELKRKEGVRIEFVDLGGGIGIPYRPGQKAVDYEYVAQRIRAAYDEII 260

Query: 227 VQ-------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA 279
           V        +  E G  I      L T  L      ++ V VD+S+   +   +      
Sbjct: 261 VPAGLDPLAVAWECGRPITGPYGWLVTRALHEKHIYRDYVGVDASMADLMRPGMYGAYHE 320

Query: 280 TIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                           V G  C   D F        +  GD +   D   +       +N
Sbjct: 321 VTVSGKENAARDRVYDVVGSLCENCDKFAVQRELPEIVPGDLLIIHDAGAHGRAMGFNYN 380

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                   +   DG+I  IR   + +DY+  L
Sbjct: 381 AKLRCGELLLRTDGSIVQIRRNETVDDYFATL 412


>gi|29346784|ref|NP_810287.1| diaminopimelate decarboxylase [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|253572240|ref|ZP_04849643.1| diaminopimelate decarboxylase [Bacteroides sp. 1_1_6]
 gi|298386569|ref|ZP_06996125.1| diaminopimelate decarboxylase [Bacteroides sp. 1_1_14]
 gi|29338681|gb|AAO76481.1| diaminopimelate decarboxylase [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|251838015|gb|EES66103.1| diaminopimelate decarboxylase [Bacteroides sp. 1_1_6]
 gi|298260946|gb|EFI03814.1| diaminopimelate decarboxylase [Bacteroides sp. 1_1_14]
          Length = 386

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 65/366 (17%), Positives = 121/366 (33%), Gaps = 26/366 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           ++TP+Y  D + L + L      + K     +  A+K  A   +   + +   G    S 
Sbjct: 13  LQTPFYYYDTKVLRDTLSAINQEVAKYPSYSVHYAVKANANPKVLTIIRESGMGADCVSG 72

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115
            E+       F      +    K      +        FN  ++ +L    + A  Q   
Sbjct: 73  GEIRAAVRAGFPANKIVFAGVGKADWEINLGLEYGIFCFNVESIPELEVINELAAAQNKI 132

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168
             +  RINP V              ++ G   +D        +E +     GL FH   +
Sbjct: 133 ANVAFRINPDVGAHTHANITTGLAENKFGISMQDMDRVIDVALEMKNVKFIGLHFHIGSQ 192

Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-------DFCQRL 218
                 F+     +  ++ +       +E I++GGG+         +        F    
Sbjct: 193 ILDMGDFIALCNRVNELQDKLEARRILVEHINVGGGLGIDYGHPNRQSVPDFKSYFATYA 252

Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL--Y 275
            +   +    ++ E G A+V    +L + VL + +  K    + D+ +   +   L   Y
Sbjct: 253 GQLKLRPYQTLHFELGRAVVGQCGSLISKVLYVKQGTKKKFAILDAGMTDLIRPALYQAY 312

Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
            +   I          V G  C + D+FG+      VK GD I+      Y     + +N
Sbjct: 313 HKMENITSEEPVEAYDVVGPICESSDVFGKAIDLNKVKRGDLIALRSAGAYGEIMASGYN 372

Query: 336 GINMPT 341
              +P 
Sbjct: 373 CRELPK 378


>gi|332638809|ref|ZP_08417672.1| diaminopimelate decarboxylase [Weissella cibaria KACC 11862]
          Length = 428

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 60/395 (15%), Positives = 112/395 (28%), Gaps = 33/395 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y  D   +   +     + +       +  A K FA   M++   Q        S 
Sbjct: 28  GTPLYAYDVGAMRQQMRDFKRVFEERHLNYAVSYASKAFATIAMYEVAAQEGMHIDVVSG 87

Query: 61  YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+      KF     ++N   K  +    A+ +   TII +   +L    +    ++  
Sbjct: 88  GEIYTALRAKFPMADVSFNGNNKSVEELTMAIENGLGTIIVDNFYELQVLHELLAERQQT 147

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
           + I LRI P V           +  S+ G            +  +     NV G+  H  
Sbjct: 148 QDILLRITPGVEAHTHDYISTGQTDSKFGFDVNSGQAEAALQQALADPNLNVLGVHAHIG 207

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL-------- 218
            +      F      +      +  + + I+ GGG                         
Sbjct: 208 SQIFDVTGFQMAAAKLVDLVHEWDFEPQVINAGGGFGIRYTADDEPLPAATFVEAIIDTI 267

Query: 219 ---KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDYL 273
                        +++EPG +IV        T+    +         VD  +  ++   L
Sbjct: 268 AEKAAAYGMQMPAVWIEPGRSIVGPAGYSLYTIGSRKDVPGIRSYLAVDGGMGDNIRPAL 327

Query: 274 LYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
              +   +              V G+ C +GD+          K GD ++      Y  +
Sbjct: 328 YQAKYEAVLAAQPDAPSDEVVRVAGKYCESGDVLVWEQALPKTKPGDVLAVLATGAYGYS 387

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             + +N    P +     D     +   +  D   
Sbjct: 388 MASNYNRNGRPAVVFVENDQAKVVVERETLADLVR 422


>gi|124026196|ref|YP_001015312.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. NATL1A]
 gi|123961264|gb|ABM76047.1| Diaminopimelate decarboxylase [Prochlorococcus marinus str. NATL1A]
          Length = 454

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 56/395 (14%), Positives = 115/395 (29%), Gaps = 33/395 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP Y++D+  L     T +             L A K  ++  +   +     G  + S
Sbjct: 48  GTPLYVLDEFSLRTACKTYISSLNKHYPGKSLPLFASKANSSLAICAVIASEGFGLDAVS 107

Query: 60  LYEVMLGHEKFGGET--HAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-QKLHK 116
             E++        E     +       E++   SN  TI+ +    +   K+ A      
Sbjct: 108 EGELLTAINGGVKEKDIVFHGNNKSQDELNFAYSNNVTIVLDNYHDIELLKNIASDNKPA 167

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCEN 169
           K+ LR  P +              S+ G          ++    +  N+ GL  H   + 
Sbjct: 168 KLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDDLKSILEELKTYKWANLTGLHAHIGSQI 227

Query: 170 KSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQ---------R 217
                   +   +             +  ++LGGG+             +          
Sbjct: 228 FEVQPHIDLAGVMADALKLAKEIGHPVVDLNLGGGLGIKYVQEDNPPSIEKWVEIISKAV 287

Query: 218 LKEFSEKYSVQI--YLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDYL 273
           +K   E+         EPG ++V N+      +    +   ++  + VD  +  +     
Sbjct: 288 VKACRERNLDLPRLMCEPGRSLVANSGLTIYKIGAKKVVPGVRTYLSVDGGMSDNPRPIT 347

Query: 274 LYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
                +    +           + G+ C +GD+  +       + GD ++      YN +
Sbjct: 348 YQSLYSACLVDKPMNTNFEKVTIAGKHCESGDVLLKDFLLPSCESGDFLAVFGTGAYNYS 407

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             + +N I  P   +          R     D   
Sbjct: 408 MSSNYNRIPRPATIMVGKGSAELTQRRELPEDLLQ 442


>gi|253699983|ref|YP_003021172.1| Orn/DAP/Arg decarboxylase 2 [Geobacter sp. M21]
 gi|251774833|gb|ACT17414.1| Orn/DAP/Arg decarboxylase 2 [Geobacter sp. M21]
          Length = 421

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 59/391 (15%), Positives = 123/391 (31%), Gaps = 34/391 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +TP+++ D+  +       +       G +   A+K      +   + +   G   SS+ 
Sbjct: 23  QTPFHIYDESGIRETGAQLVKAFSGIPGFREFFAVKALPNREILKLMKEMGFGFDCSSIP 82

Query: 62  EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           EV+L  E     E   +      ++    A       +  + +S + K          ++
Sbjct: 83  EVILARELGARPEDIMFTSNNTSQEEFDFATQDGGCILNLDDISLIEKVPH-----FPEM 137

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCE---- 168
                         +   N   ++ G   +  +E+  K         GL           
Sbjct: 138 ICFRYNPGPRRTGNVIIGNPEEAKYGVSHEQVVEAYRKAKERGATRFGLHTMVASNELDY 197

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK 224
                    +L+  E+       + E++++GGG     +       +      + E  + 
Sbjct: 198 TYIVETARMVLEVAEEVEAALGIEFEFVNIGGGFGIPYRPEQKPLDLTGMSAEITELFDG 257

Query: 225 ------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                 ++  +Y+E G  +      L TT ++  +  +  + VD+ + A +   L     
Sbjct: 258 FRKRHGHAPAMYMESGRFMTGPHGALVTTAINSKDTYRRYIGVDACMSALMRPALYGAYH 317

Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                            V G  C   D F      +PV+ GD +   D   +       +
Sbjct: 318 HIDVLGKDRDPKTEIYDVVGSLCENNDKFAVQRELQPVEDGDILVIHDSGAHGHAMGFQY 377

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG   P   +   DG ++ IR   +  DY+ 
Sbjct: 378 NGRLRPKELMLRADGRVELIRRAETVADYFA 408


>gi|29827457|ref|NP_822091.1| diaminopimelate decarboxylase [Streptomyces avermitilis MA-4680]
 gi|29604556|dbj|BAC68626.1| putative diaminopimelate decarboxylase [Streptomyces avermitilis
           MA-4680]
          Length = 466

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 62/397 (15%), Positives = 126/397 (31%), Gaps = 36/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+Q++     T       A   ++ A K F    M   + +   G    S  E
Sbjct: 68  GTPVYVLDEQEVRERCRTYRTAFPEAD--VVYAAKAFLCRAMAHWVQEEGLGLDVCSAGE 125

Query: 63  VMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-QKLHKKI 118
           + L     F  E    +      +    A+      I+ ++ S++ +          +K+
Sbjct: 126 LALAVTTGFPPEKIVMHGNAKSPEDLRTALRLGVGRIVVDSASEIARLAAITPCDTRQKV 185

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCEN 169
            +R+ P ++                G    D          ++     + GL  H   + 
Sbjct: 186 MVRVVPGIAAGGHTKIRTGTDDQNFGLSLTDGSAQHAITRILDQPHLELVGLHCHIGSQI 245

Query: 170 ----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
                       M+  + +        +  +++GGG     +          L       
Sbjct: 246 AAVKPYVAAVRRMVGLMARVRDQHGVILPQLNIGGGHAIAYRPGDETMNVGVLAGRVRAE 305

Query: 226 -----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYL 273
                        ++ +EPG A+V         VL +    ++  + VD  +  +    L
Sbjct: 306 LEDGCARARLPVPRLTIEPGRAVVGPAGVAVYRVLAVKRTGEHTFVAVDGGMSDNPRPAL 365

Query: 274 L---YQESATIYPNTGPYTA-MVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNI 328
               Y       P++ P     V GR C AGD+  +       V+ GD ++      Y++
Sbjct: 366 YGVRYAPRLIGRPSSAPSRFVTVVGRHCEAGDVLADGVALPGDVRPGDLLAVPAAGAYHL 425

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           +  + +N +  P +   +       +R  S +D    
Sbjct: 426 SMTSGYNLVGRPPVVAVSDGIARVLVRRESLDDMSRR 462


>gi|125624015|ref|YP_001032498.1| LysA protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|124492823|emb|CAL97778.1| LysA protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|300070785|gb|ADJ60185.1| diaminopimelate decarboxylase [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 419

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 67/394 (17%), Positives = 122/394 (30%), Gaps = 30/394 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L++   G   +S  
Sbjct: 19  PTPFHLYDEKGIRQKARDLHKAFAWNKGFKEFFAVKATPTPAILKILHEEGCGVDCASYV 78

Query: 62  EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK-I 118
           E++L     F G    ++       E         TI  +    +   K+    +  K +
Sbjct: 79  ELLLSEKCGFDGTEMMFSSNDTPAEEFQFANQLGATINLDAYEHIEFLKNLPDFVFPKTM 138

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVN--GLMFHNNCEN--- 169
            LR NP   ++       N   S+ G      I+     +   V   G+           
Sbjct: 139 SLRYNPGGVFAMGTKIMDNPEESKFGMTKAQLIQGIKDLQKLGVKEFGMHSFLASNTVTN 198

Query: 170 -KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
                    + +   +        +++I+L GGI    +     +   ++ +   K   +
Sbjct: 199 DYYPELARKLFELALEIRQETGITLDFINLSGGIGVNYRPDEEANDIAKIGQGVHKAYEE 258

Query: 229 I-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
           I           Y E G  ++     L T VL + E  +  V VD+S    +        
Sbjct: 259 ILTANGIENLKIYTELGRFMLAPHGHLITKVLHLKETYRKYVGVDASAVNLMRPAFYDAY 318

Query: 278 SATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                          T  + G  C   D F +      +K+GD +   D   +  +    
Sbjct: 319 HHITVAGKEKQEATETYDITGSLCENNDKFAKERAFPEIKVGDLLVIHDTGAHGFSMGYQ 378

Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           +N        +   DG  + IR      DY+  L
Sbjct: 379 YNAKLRSAEILLQEDGKTRLIRRAEKPADYFATL 412


>gi|167758309|ref|ZP_02430436.1| hypothetical protein CLOSCI_00648 [Clostridium scindens ATCC 35704]
 gi|167664206|gb|EDS08336.1| hypothetical protein CLOSCI_00648 [Clostridium scindens ATCC 35704]
          Length = 424

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 64/391 (16%), Positives = 121/391 (30%), Gaps = 29/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ L  N+         N G K   A+K      + + L +Y  G   SS  
Sbjct: 20  PTPFHLYDEKGLRRNMKALKEAFAWNKGYKEYFAVKATPNPFLINILKEYGCGCDCSSYT 79

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+ML       GE   ++       E          I  + ++ ++  +     + + I 
Sbjct: 80  ELMLSEAIGVTGEDIMFSSNDTPAEEFAYAEKLGAIINLDDITHIDFLEQTIGHIPETIS 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN---- 169
            R NP   +        N   S+ G   +        ++ +     G+            
Sbjct: 140 CRYNPGGLFKISNDIMDNPGDSKYGMTTEQLFESFKILKEKGAKEFGIHAFLASNTVTND 199

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
              +    + +   K        I++I+L GGI          +  + + +   +   + 
Sbjct: 200 YYPMLAKILFELAVKLQMETGVHIKFINLSGGIGIPYTPDQEPNDIRMIGDGVRRVYEEV 259

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     IY E G  ++     L T  +      K  V VD+     +   +     
Sbjct: 260 LTPAGMGDVAIYTELGRFMMGPYGCLVTKAIHEKHTHKEYVGVDACAVNLMRPAMYGAYH 319

Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   + G  C   D F        +  GD +   D   +  +    +
Sbjct: 320 HITVMGKEDIPCDHKYDIAGSLCENNDKFAIDRMLPKIDKGDLLVIHDTGAHGFSMGYNY 379

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   DGT++ IR   +  DY+ 
Sbjct: 380 NGKLKSAELLLKEDGTVQLIRRAETPADYFA 410


>gi|164688315|ref|ZP_02212343.1| hypothetical protein CLOBAR_01960 [Clostridium bartlettii DSM
           16795]
 gi|164602728|gb|EDQ96193.1| hypothetical protein CLOBAR_01960 [Clostridium bartlettii DSM
           16795]
          Length = 432

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 60/401 (14%), Positives = 116/401 (28%), Gaps = 39/401 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           KTP Y+ D++ + +     +   K    G K+  A K F    M   + +        S 
Sbjct: 29  KTPLYVFDEELIRSKCREYIKSFKVKENGNKVAYAGKAFLTKYMCKLVCEEGLCLDVVSG 88

Query: 61  YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLH 115
            E+          E   ++   K  D     +       + +   +L+            
Sbjct: 89  GELYTAYKAGMPMENILFHGNNKTVDEVKLGIELGVGRFVVDNFYELDLIEKFCLENNKT 148

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
           +KI  R+ P +           +  S+ G            +   + +   + G+  H  
Sbjct: 149 QKIYFRVTPGIDAHTHKYIRTGQIDSKFGFALINGDFYKAVEKVKQYKNIELVGIHAHIG 208

Query: 167 CENKSFLCFSAMLKNIEKEFGHFI-----TQIEWISLGGGIHFTDKDYPVK--------- 212
            +      F   ++ + K             +  + LGGGI     +             
Sbjct: 209 SQIFEIKPFLDEVEIMLKLLKEVNENNDDINLTEVDLGGGIGVYYTEEDKPKTISEFCEA 268

Query: 213 --DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268
             +    + E        + +EPG ++V N  +   TV  I E       V     +  +
Sbjct: 269 IINKADEVCEELNIKRPTLLIEPGRSLVANAGSTIYTVGSIKEIKNVRTYVSVDGGMTDN 328

Query: 269 VPDYLLYQESATIYPNT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323
           +   L   +      N        +   + G+ C +GDI         +  GD +     
Sbjct: 329 IRPSLYQADYECGIVNKINKTGHNHKVTIAGKCCESGDILISDTEIGDINSGDILITTTT 388

Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             Y  +  + +N I    +          A +  SY D   
Sbjct: 389 GAYGYSMASNYNKIPKNPVVFVQNGEDKLACKRQSYEDLLA 429


>gi|148239869|ref|YP_001225256.1| diaminopimelate decarboxylase [Synechococcus sp. WH 7803]
 gi|147848408|emb|CAK23959.1| Diaminopimelate decarboxylase [Synechococcus sp. WH 7803]
          Length = 453

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 48/396 (12%), Positives = 109/396 (27%), Gaps = 34/396 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKL-LLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP Y++D+  +           +    G  L + A K  ++  +   +     G  + S
Sbjct: 46  GTPLYVLDEASIRQACRAYREALERHYPGPSLAIYASKANSSMALSALVASEGLGLDAVS 105

Query: 60  LYEVMLGHEK-FGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             E++   +     E    +       E+     +   ++ +    L+  +    +  + 
Sbjct: 106 AGELITALDGGMPAERMVLHGNNKSLEELALAYRSGVMVVADNQHDLDLLQTIVPEGGEP 165

Query: 118 IGLRIN--PSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCE 168
           + L +   P +              S+ G    +          +    V GL  H   +
Sbjct: 166 VRLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDELEPVLRALQGAAWARVEGLHAHIGSQ 225

Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRL------- 218
                    +   +             +  +++GGG+                       
Sbjct: 226 IFELEPHRDLAAVMADALGLARELGHPVRDLNVGGGLGIRYVSSDDPPSIDAWVQVVGTA 285

Query: 219 ----KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDY 272
                +       ++  EPG ++V        TV    +   I+  + VD  +  +    
Sbjct: 286 VASACQQRNLELPRLLCEPGRSLVAPAGVTVYTVGARKVVPGIRTYLSVDGGMSDNPRPI 345

Query: 273 LLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
               +     A         T  + G+ C +GD+  +         G+ +       YN+
Sbjct: 346 TYQSQYTACLADRPKAEAEETVTIAGKHCESGDVLLKDLPFPACTSGEILVVLATGAYNV 405

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +  + +N I  P   +          R     D   
Sbjct: 406 SMSSNYNRIPRPATVLVKGAEAELVQRREQPEDLLR 441


>gi|116512127|ref|YP_809343.1| diaminopimelate decarboxylase [Lactococcus lactis subsp. cremoris
           SK11]
 gi|116107781|gb|ABJ72921.1| diaminopimelate decarboxylase [Lactococcus lactis subsp. cremoris
           SK11]
          Length = 419

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 66/394 (16%), Positives = 122/394 (30%), Gaps = 30/394 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L++   G   +S  
Sbjct: 19  PTPFHLYDEKGIRQKARDLHKAFAWNKGFKEFFAVKATPTPAILKILHEEGCGVDCASYI 78

Query: 62  EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK-I 118
           E++L     F G    ++       E         TI  +    +   K+    +    +
Sbjct: 79  ELLLSEKCGFDGTEMMFSSNDTPAEEFQFANQLGATINLDAYEHIEFLKNLPDFVFPNTM 138

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVN--GLMFHNNCEN--- 169
            LR NP   ++       N   S+ G      I+     +   V   G+           
Sbjct: 139 SLRYNPGGVFAMGTKIMDNPEESKFGMTKAQLIQGIKDLQKLGVKEFGMHSFLASNTVTN 198

Query: 170 -KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
                    + +   +        +++I+L GGI    +     +   ++ +   K   +
Sbjct: 199 DYYPELARKLFELALEIRQETGVTLDFINLSGGIGVNYRPDEEANDIAKIGQGVHKAYEE 258

Query: 229 -----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
                      IY E G  ++     L T VL + E  +  V VD+S    +        
Sbjct: 259 VLTANGIENLKIYTELGRFMLAPHGHLITKVLHLKETYRKYVGVDASAVNLMRPAFYDAY 318

Query: 278 SATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                          T  + G  C   D F +      +K+GD +   D   +  +    
Sbjct: 319 HHITVAGKEKQEATETYDITGSLCENNDKFAKERAFPEIKVGDLLVIHDTGAHGFSMGYQ 378

Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           +N        +   DG  + IR   +  DY+  L
Sbjct: 379 YNAKLRSAEILLQEDGKTRLIRRAENPADYFATL 412


>gi|323464497|gb|ADX76650.1| diaminopimelate decarboxylase [Staphylococcus pseudintermedius
           ED99]
          Length = 421

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 64/394 (16%), Positives = 121/394 (30%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D+ ++   +       +    G  L  A K F    M     +        S 
Sbjct: 26  GTPTIVYDEAQIRQQMRRYHSAFQQNDIGYVLSYASKAFTCLQMVKLAAEEDFELDVVSE 85

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    E  F  +   ++   K          S     + + + +++  +  A K    
Sbjct: 86  GELYTALEAGFDPQRIHFHGNNKTKHEIRYALESGIGYFVVDALDEIDLIEQYATKPVD- 144

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
           + LR+NP V           +  S+ G         E  +    +    + G+ FH   +
Sbjct: 145 VLLRVNPGVEAHTHEFIQTGQEKSKFGLSLKHGLALEAVEKIRNTNNIVLKGIHFHIGSQ 204

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR--------LKE 220
            +         K +          I+ ++LGGG      +       +         +K 
Sbjct: 205 IEETTGMIETAKMVLNWLDEHAIMIDLLNLGGGFSAQYVEGDQSFDIEAGITEIVQAIKA 264

Query: 221 FSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274
             ++    I    +EPG +IV         V  I +       V     +  H+   L  
Sbjct: 265 ECQQLKYPIPTLSIEPGRSIVAEAGVTLYEVGTIKDIPGVNKYVSIDGGMSDHIRTALYD 324

Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331
             YQ        T   T  + G+ C +GDI          VK GD ++      Y+ +  
Sbjct: 325 AKYQALLINRNETPDETVTIAGKLCESGDIIIHEAKLPSSVKRGDYLAILTTGAYHYSMA 384

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + +N +  P++         + ++  S      N
Sbjct: 385 SNYNQMQKPSVFFVKDGKAREVVKRQSLRQLIIN 418


>gi|115358995|ref|YP_776133.1| diaminopimelate decarboxylase [Burkholderia ambifaria AMMD]
 gi|115284283|gb|ABI89799.1| diaminopimelate decarboxylase [Burkholderia ambifaria AMMD]
          Length = 412

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 59/400 (14%), Positives = 120/400 (30%), Gaps = 46/400 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   + + +             +  A K  +   +   +        + SL E
Sbjct: 16  GTPLWVYDADVIRDRIAQLRQFDV-----IRYAQKANSNLHILKLMRDERVCVDAVSLGE 70

Query: 63  VMLGHEKF-----GGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHK 116
           +              E   +     D    A +  +  T+   ++  L +  + A     
Sbjct: 71  IERSLAAGFSPAGDPEGVVFTADLIDRPTLAAVLKHGVTVNAGSLDMLARVGEHA--PGH 128

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170
           ++ LR+NP   +      +   P S+ G    D       +      + G+  H      
Sbjct: 129 RVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVRQYGLKLVGIHMHIGSGVD 188

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEF 221
            +   S +   +          IE IS GGG+               Y  +    R +  
Sbjct: 189 -YGHLSQVCDAMVDLVTSLGHDIEAISAGGGLSIPYRDGEPRVDVSHYFSQWDAARKRIE 247

Query: 222 SE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279
               ++V+I +EPG  +V    TL T V  ++   K+  + +D+     +   +     A
Sbjct: 248 RHLGHAVRIEIEPGRFLVAEAGTLVTEVQAVNHRPKHDFVLIDAGFNDLMRPSMYGSYHA 307

Query: 280 TIYPNTGP--------YTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324
                               + G  C +GD+F +              +IGD +   D  
Sbjct: 308 VSVHAPDGALPAGRPLVDIAIAGPLCESGDVFTQDAGGVVTHRKLAQPQIGDLLFLHDAG 367

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            Y  +  + +N   +    + +        R  +  +   
Sbjct: 368 AYGASMSSNYNSRPLAPEVLIDRGTPRLIRRRQTIGELLA 407


>gi|291550060|emb|CBL26322.1| Diaminopimelate decarboxylase [Ruminococcus torques L2-14]
          Length = 423

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 61/391 (15%), Positives = 122/391 (31%), Gaps = 29/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +  N          N G K   A+K      +   L +Y  G   SS  
Sbjct: 20  PTPFHLYDEKGIRENAKALKEAFAWNPGYKEYFAVKATPNPFLLQILKEYGCGCDCSSYT 79

Query: 62  EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++       G    ++     + +          I  + ++ ++  +     + + I 
Sbjct: 80  ELLMSDAVGIDGHDIMFSSNDTPEEDFKLADKLGAIINLDDITHIDFLEKTIGHIPETIS 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN---- 169
            R NP   +        N   S+ G   +        ++++     G+            
Sbjct: 140 CRYNPGGIFKISNDIMDNPGDSKYGMTTEQITEAFKTLKAKGAKEFGIHAFLASNTVTND 199

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
              +    + +   +        I++I+L GGI          +  + + E   K   + 
Sbjct: 200 YYPMLAKVLFEQAVRLQKETGVHIKFINLSGGIGIPYTPDQEPNDIRVIGEGVRKVYEEV 259

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     IY E G  ++     L T  +      KN + VD+     +   +     
Sbjct: 260 LVPAGMGDVAIYTELGRFMMGPYGCLVTKAIHEKNTYKNYIGVDACAVNLMRPAMYGAYH 319

Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        V +GD +   D   +  +    +
Sbjct: 320 HITVLGKEDAPCDHKYDVTGSLCENNDKFAIDRMLPEVDMGDYLVIHDTGAHGFSMGYNY 379

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   DG+++ IR   +  DY+ 
Sbjct: 380 NGKLKSAELLLKEDGSVQMIRRAETPKDYFA 410


>gi|170699414|ref|ZP_02890459.1| diaminopimelate decarboxylase [Burkholderia ambifaria IOP40-10]
 gi|170135670|gb|EDT03953.1| diaminopimelate decarboxylase [Burkholderia ambifaria IOP40-10]
          Length = 412

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 60/400 (15%), Positives = 121/400 (30%), Gaps = 46/400 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   + + +             +  A K  +   +   +        + SL E
Sbjct: 16  GTPLWVYDADVIRDRIAQLRQFDV-----IRYAQKANSNLHILKLMRDERVCVDAVSLGE 70

Query: 63  VMLGHEKF-----GGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHK 116
           +              E   +     D    A +  +  T+   ++  L +  + A     
Sbjct: 71  IERSLAAGFSPAGDPEGVVFTADLIDRPTLAAVLKHGVTVNAGSLDMLARVGEHA--PGH 128

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170
           ++ LR+NP   +      +   P S+ G    D       +      + G+  H      
Sbjct: 129 RVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVRQYGLKLVGIHMHIGSGVD 188

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEF 221
            +   S +   +          IE IS GGG+               Y  +    R +  
Sbjct: 189 -YGHLSQVCDAMVDLVTSLGHDIEAISAGGGLSIPYRDGEPRVDVGHYFSQWDAARKRIE 247

Query: 222 SE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279
               ++V+I +EPG  +V    TL T V  ++   K+  + +D+     +   +     A
Sbjct: 248 RHLGHAVRIEIEPGRFLVAEAGTLVTEVQAVNHRPKHDFVLIDAGFNDLMRPSMYGSYHA 307

Query: 280 TIYPNTGP--------YTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324
                               + G  C +GD+F +              +IGDR+   D  
Sbjct: 308 VSVHAPDGALPAGRPLVDIAIAGPLCESGDVFTQDAGGVVTHRKLAQPQIGDRLFLHDAG 367

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            Y  +  + +N   +    + +        R  +  +   
Sbjct: 368 AYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIGELLA 407


>gi|331695513|ref|YP_004331752.1| diaminopimelate decarboxylase [Pseudonocardia dioxanivorans CB1190]
 gi|326950202|gb|AEA23899.1| diaminopimelate decarboxylase [Pseudonocardia dioxanivorans CB1190]
          Length = 499

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 55/415 (13%), Positives = 124/415 (29%), Gaps = 55/415 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +++D+    +               +  A K F +  +   +         +S  E
Sbjct: 66  GTPLFVVDEADFRSRAAEFAASFGAEA--VHYAAKAFLSTEIARWVADEGLSMDVASGGE 123

Query: 63  VMLG-HEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQ--KLHKK 117
           + +     F  E  A +   K      +AV +    I+ ++  ++ +    A+   +   
Sbjct: 124 LAVALRAGFPAERIAVHGNNKSATELDEAVAAGVGRIVVDSFHEIARLDAVARARDVVVP 183

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG------------EKCKDKIESEIKNVNGLMFHN 165
           + +R+   V               + G            E  +  + +    + GL  H 
Sbjct: 184 VMIRVTVGVEAHTHEFIATAHEDQKFGFSISGGDTSPAAEAARRVLAARGLRLVGLHSHI 243

Query: 166 NCENKSFLCF--------SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKD 213
             +      F          + +   +     +  +  + LGGG     +       V +
Sbjct: 244 GSQIFDTEGFEVAAHRVVRFLARLHAEHGADALEDLTTLDLGGGFGIAYRAEESPLDVAE 303

Query: 214 FCQRLKEFSEKYSVQ-------IYLEPGEAIVTNTTTLNTTVLDISENI-----KNLVIV 261
              +L++  ++           I +EPG AI    T     V  + +       +  V V
Sbjct: 304 LAAQLRDIVKRECHAEDLDVPAIAVEPGRAIAGPGTVTLYEVGTLKDVPLGSGARRYVSV 363

Query: 262 DSSVEAHVPDYLLYQESATIYPNTG-----------PYTAMVCGRSCLAGDIFGEFHFEK 310
           D  +  ++   L          +                + V G+ C +GDI     +  
Sbjct: 364 DGGMSDNIRTALYDAVYDCRLVSRSSAADSPDGSADAALSRVVGKHCESGDIVVRDCWLP 423

Query: 311 -PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  GD ++      Y  +  + +N +  P +           +R  + +D + 
Sbjct: 424 ADLGPGDLLAVAATGAYCYSMASSYNRLPRPAVVAVRDGRARLILRRETVDDQFR 478


>gi|227501672|ref|ZP_03931721.1| diaminopimelate decarboxylase [Corynebacterium accolens ATCC 49725]
 gi|227077697|gb|EEI15660.1| diaminopimelate decarboxylase [Corynebacterium accolens ATCC 49725]
          Length = 445

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 59/404 (14%), Positives = 132/404 (32%), Gaps = 43/404 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP Y+ D+    +               +  A K F +  +   +N+      +++L E
Sbjct: 39  QTPLYVFDEDDFRSRCQDMARAFGGPDH-VHYASKAFISKKVVQWVNEEGLCLDAAALNE 97

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F       +   KD E   +        ++ +   +L +    A +    + 
Sbjct: 98  LKIALAAGFPAARITAHGNNKDEEYLRLCVDAGVGHVVIDNEQELEELNRIAGEAGVVQP 157

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + +R+ P V          +    + G            K  +E +  +++GL  H   +
Sbjct: 158 VMIRVKPGVDAHTHEFVATSHEDQKFGISLATGAAFAAAKRCLEVDNLHLSGLHCHVGSQ 217

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY-----------PVKD 213
             +   F      +L+   +        +  + LGGG       Y            +  
Sbjct: 218 VFNAEGFKLAAERVLELYRQIHTELGVDLAELDLGGGFGIPYMPYEEALDIDRVAKDMLR 277

Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE--------NIKNLVIVDSSV 265
              +  E  +  +  + +EPG ++V  +      V  + +         ++  + +D  +
Sbjct: 278 AVDQTAEDLDIKAPFLLVEPGRSLVAGSAVTVYRVGTVKDVETGKADLPVRRYISIDGGM 337

Query: 266 EAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISF 320
             ++   L   E        + +     + + G  C +GDI  E       ++ GD ++F
Sbjct: 338 SDNIRPALYSSEYDVRLVNRFSDGEMVPSRIVGFHCESGDILLEEGELPNDIQPGDLLAF 397

Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
               GY     + +NG   P +    V  T   +R  +  D  +
Sbjct: 398 AATGGYQYMMSSRYNGAVRPAVVATRVGNTKPMLRRETIEDLLS 441


>gi|299531856|ref|ZP_07045257.1| diaminopimelate decarboxylase [Comamonas testosteroni S44]
 gi|298720176|gb|EFI61132.1| diaminopimelate decarboxylase [Comamonas testosteroni S44]
          Length = 415

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 55/400 (13%), Positives = 111/400 (27%), Gaps = 45/400 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   +   +             +  A K  +   +   + +      + S  E
Sbjct: 18  GTPLWVYDAATIRERIAQLK-AFD----TVRFAQKACSNIHILKLMREQGVKVDAVSRGE 72

Query: 63  VMLGHE-----KFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-QKLH 115
           V+          FG      +     D    A +   +  +      ++     A     
Sbjct: 73  VLRALAAGFTPGFGEPADIVFTADVMDEATLATVV--EHQVPVNAGSIDMLHQLAAVSKG 130

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCEN 169
             + LRINP   +      +     S+ G          D I++    + GL  H     
Sbjct: 131 HHVWLRINPGFGHGHSNKTNTGGEHSKHGIWHSELEAALDAIKAGGLVLAGLHMHIGSGV 190

Query: 170 KSFLCFSAMLKNIE--KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE---- 223
                       ++  +        +  IS GGG+    K               +    
Sbjct: 191 DYGHLQEVCGAMVKLVERTKAAGVDLHAISAGGGLSIPYKQGDATIDTNHYHGLWDAARK 250

Query: 224 ------KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQ 276
                  +S+ + LEPG  +V  +  L  TV        N  + VD+     +   +   
Sbjct: 251 QAEGIVGHSLGLELEPGRFLVAESGVLLGTVRATKNAGSNHFVLVDTGFNELMRPSMYGS 310

Query: 277 ESATIYPNT-----GPYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324
                             ++V G  C +GD+F +               +GD +   D  
Sbjct: 311 YHGMEVLRRDGQSLPAQDSVVAGPLCESGDVFTQGDGGVVLPRALAGASVGDLLVIHDTG 370

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            Y  +  + +N   +    + + + +    R  +  +   
Sbjct: 371 AYGSSMSSNYNTRPLAAEVLVDGEQSQLIRRRQTVEELLA 410


>gi|15673266|ref|NP_267440.1| diaminopimelate decarboxylase [Lactococcus lactis subsp. lactis
           Il1403]
 gi|12724260|gb|AAK05382.1|AE006360_11 diaminopimelate decarboxylase [Lactococcus lactis subsp. lactis
           Il1403]
          Length = 419

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 66/394 (16%), Positives = 123/394 (31%), Gaps = 30/394 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L++   G   +S  
Sbjct: 19  PTPFHLYDEKGIRQKARDLHKAFAWNKGFKEFFAVKATPTPAILKILHEEGCGVDCASYV 78

Query: 62  EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK-I 118
           E++L     F G    ++       E         TI  +    +   K+    +  + +
Sbjct: 79  ELLLSEKCGFDGSEMMFSSNDTPAEEFQFANQLGATINLDAYEDIEFLKNLTDFIFPETM 138

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVN--GLMFHNNCEN--- 169
            LR NP   ++       N   S+ G      I+     +   V   G+           
Sbjct: 139 SLRYNPGGVFAMGTKIMDNPEESKFGMTKAQLIQGIKDLQKLGVKKFGMHSFLASNTVTN 198

Query: 170 -KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
                  + + K   +        +++I+L GGI    +     +   ++ +   +   +
Sbjct: 199 DYYPELANKLFKLALEIREETGITLDFINLSGGIGVNYRPDEEANDIAKIGQGVHEAYDE 258

Query: 229 -----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
                      IY E G  ++     L T VL I E  +  V VD+S    +        
Sbjct: 259 VLRANGIENLKIYTELGRFMLAPHGHLITKVLHIKETYRKYVGVDASAVNLMRPAFYDAY 318

Query: 278 SATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                             + G  C   D F +      ++IGD +   D   +  +    
Sbjct: 319 HHITVAGKEKDEATEIYDITGSLCENNDKFAKERAFPKIEIGDLLVIHDTGAHGFSMGYQ 378

Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           +N     +  +   DG  + IR      DY+  L
Sbjct: 379 YNAKLRSSEVLLQEDGKTRLIRRAEKPADYFATL 412


>gi|116073043|ref|ZP_01470305.1| Diaminopimelate decarboxylase [Synechococcus sp. RS9916]
 gi|116068348|gb|EAU74100.1| Diaminopimelate decarboxylase [Synechococcus sp. RS9916]
          Length = 456

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 54/396 (13%), Positives = 107/396 (27%), Gaps = 34/396 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLL-LALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP Y++D+  +           +    G  L   A K  ++  +         G  + S
Sbjct: 46  GTPLYVLDEAGIRAACRAYRTALECHYPGPSLAVYASKANSSLALSAIAASEGLGLDAVS 105

Query: 60  LYEVMLGHEK-FGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLH 115
             E++   +     E    +     D E+     N   I+ +    L++      A +  
Sbjct: 106 AGELLTALKGGMPAERIVLHGNNKSDEELLLAYRNDVMIVADNQHDLDRLAVLVPAGERP 165

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCE 168
            ++ LR  P +              S+ G                    V GL  H   +
Sbjct: 166 ARLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQLEPVLRHLATCGWAKVTGLHAHIGSQ 225

Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
                    +   +             +  +++GGG+     +           +   + 
Sbjct: 226 IFELNPHRDLAAVMADALKLARGLGHPVTDLNVGGGLGIRYVESDDPPSIDAWVQVVAEA 285

Query: 226 SVQIY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDY 272
            V               EPG ++V ++     ++    E         VD  +  +    
Sbjct: 286 VVAACRERSLDLPRLLCEPGRSLVASSGVTLYSIGSRKEVPGVRTYLSVDGGMSDNPRPI 345

Query: 273 LLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
                     A         +  + G+ C +GD+        P   GD +       YN 
Sbjct: 346 TYQSLYTALLADRPQAEATESITLAGKHCESGDVLLNDLALPPSVSGDVLVVLATGAYNA 405

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +  + +N I  P   + +        R  S  D   
Sbjct: 406 SMSSNYNRIPRPAAVLVHDGMAEVIQRRESSEDLLR 441


>gi|288927565|ref|ZP_06421412.1| diaminopimelate decarboxylase [Prevotella sp. oral taxon 317 str.
           F0108]
 gi|288330399|gb|EFC68983.1| diaminopimelate decarboxylase [Prevotella sp. oral taxon 317 str.
           F0108]
          Length = 387

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 60/371 (16%), Positives = 122/371 (32%), Gaps = 29/371 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALY-IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           + TP+Y  D+  L   LD     + ++    +  A+K  A   +  T+     G    S 
Sbjct: 12  LSTPFYYYDEGMLRATLDALNEQLAQHPNFIVHYAVKANANKRILQTMKAAGLGVDCVSG 71

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHK- 116
            E+       F G++  +    K+      A+ +        ++ +L   +    +L++ 
Sbjct: 72  GEIEAALRAGFKGDSIVFAGVGKNDWEIKLALENGIFCFNVESIEELEVIEQLCSELNRT 131

Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGE-------KCKDKIESEIKNVNGLMFHNNCE 168
             + LR+NP+V+             ++ G          +     +     GL FH   +
Sbjct: 132 ADVCLRVNPNVAAHTHAKITTGLAENKFGIPIGHVRPTIERLQVLKRIRFIGLHFHIGSQ 191

Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ-------RL 218
                 F      + ++         + E I++GGG+     +                 
Sbjct: 192 IVDMNDFREVCTSVNSLLNLLKQHGIEPEHINVGGGLGIDYDNPDTHAIPDFKDYFDTYA 251

Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQE 277
           +        +++ E G A+V     L + VL + +   K  +I+D+ +   +    LY  
Sbjct: 252 RHLQLNEKQKVHFELGRALVGQCGWLVSRVLYVKQGQNKRFLILDAGMNDLLRPA-LYHA 310

Query: 278 SATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
              I   + P        V G  C + D+FG          G  ++      Y     + 
Sbjct: 311 RHQILNLSKPSAPSEVYDVVGPVCESSDVFGSDVVLPASHRGHLVAICSAGAYGEAMASQ 370

Query: 334 FNGINMPTIAV 344
           +N   +P    
Sbjct: 371 YNCRQLPKSYF 381


>gi|326406821|gb|ADZ63892.1| diaminopimelate decarboxylase [Lactococcus lactis subsp. lactis
           CV56]
          Length = 419

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 67/394 (17%), Positives = 123/394 (31%), Gaps = 30/394 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L++   G   +S  
Sbjct: 19  PTPFHLYDEKGIRQKARDLHKAFAWNKGFKEFFAVKATPTPAILKILHEEGCGVDCASYV 78

Query: 62  EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK-I 118
           E++L     F G    ++       E         TI  +    +   K+    +  + +
Sbjct: 79  ELLLSEKCGFDGSEMMFSSNDTPAEEFQFANQLGATINLDAYEDIEFLKNLTDFIFPETM 138

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVN--GLMFHNNCEN--- 169
            LR NP   ++       N   S+ G      I+     +   V   G+           
Sbjct: 139 SLRYNPGGVFAMGTKIMDNPEESKFGMTKAQLIQGIKDLQKLGVKKFGMHSFLASNTVTN 198

Query: 170 -KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
                  S + K   +        +++I+L GGI    +     +   ++ +   +   +
Sbjct: 199 DYYPELASKLFKLALEIREETGITLDFINLSGGIGVNYRPDEEANDIAKIGQGVHEAYDE 258

Query: 229 -----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
                      IY E G  ++     L T VL I E  +  V VD+S    +        
Sbjct: 259 VLRANGIENLKIYTELGRFMLAPHGHLITKVLHIKETYRKYVGVDASAVNLMRPAFYDAY 318

Query: 278 SATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                             + G  C   D F +      ++IGD +   D   +  +    
Sbjct: 319 HHITVAGKEKDEATEIYDITGSLCENNDKFAKERAFPKIEIGDLLVIHDTGAHGFSMGYQ 378

Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           +N     +  +   DG  + IR      DY+  L
Sbjct: 379 YNAKLRSSEVLLQEDGKTRLIRRAEKPADYFATL 412


>gi|256823976|ref|YP_003147936.1| diaminopimelate decarboxylase [Kytococcus sedentarius DSM 20547]
 gi|256687369|gb|ACV05171.1| diaminopimelate decarboxylase [Kytococcus sedentarius DSM 20547]
          Length = 445

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 59/403 (14%), Positives = 119/403 (29%), Gaps = 41/403 (10%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           + TP++L D+  +  +            G     A+K      +   L++   G   SSL
Sbjct: 38  LPTPFHLYDEAAIRAHAREFNAAFAWAPGFLNHFAVKATPTPAIVRVLSEEGFGADCSSL 97

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTI-IFNTVSQLNKFKDKAQKLHKKI 118
            E+ L       GE   +       E  A       +   + ++ L+  +  A +L + +
Sbjct: 98  PELELCDRLGIRGERIMFTSNDTPAEEFARAVELGAVANLDDITHLDTLEAAAGRLPELL 157

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFHNNCENKSFL- 173
             R NP            +   ++ G   +  +++      + V     H    +     
Sbjct: 158 SFRYNPGA-ERTGNAIIGDPVQAKYGVTSEQLLDAYREARDRGVQRFALHTMVASNELDG 216

Query: 174 -----CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
                    + +   +        +E+++LGGGI             Q + +       Q
Sbjct: 217 AYIVETARMVFELAVRLKDELGITLEFVNLGGGIGIPYGVDDAPMNLQAVSDGIRALHEQ 276

Query: 229 IY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
           +             E G  +      L + V  +++  K  V +D+S+   +   +    
Sbjct: 277 VLTPSGLEGLGLRFECGRVMTGPYGYLVSRVRQVTQKYKTYVGLDASMHNLMRPAMYGSY 336

Query: 278 SATI---------------YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFED 322
                                     T  V G  C   D F        V  GD +   D
Sbjct: 337 HHITVLPGPDAASLPDAGDLAPGATSTYDVTGSLCENNDKFAIDRELPVVHPGDVVVLHD 396

Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
              +  +    +NG       + + +G    IR   + +D + 
Sbjct: 397 AGAHGHSMGFNYNGKLRSAEYLLDQNGQAHQIRRAETMDDLFA 439


>gi|227503836|ref|ZP_03933885.1| diaminopimelate decarboxylase [Corynebacterium striatum ATCC 6940]
 gi|227199660|gb|EEI79708.1| diaminopimelate decarboxylase [Corynebacterium striatum ATCC 6940]
          Length = 444

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 59/404 (14%), Positives = 125/404 (30%), Gaps = 43/404 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D+    +               +  A K F    +   +N+       +SL E
Sbjct: 38  GTPLYVFDEDDFRSRCRDMARAFGGPEH-VHYASKAFITKRIVKWVNEEGLCLDVASLNE 96

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKL--HKK 117
             +     F       +   K+ E   +  + +   ++ +   +L +  + A+     + 
Sbjct: 97  AKVALAAGFPPARMTAHGNNKEREYLELCVDNEIAHVVLDNEGELAQLNEIARAAGRVQP 156

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168
           + +R+ P V          +    + G               +ESE   + GL  H    
Sbjct: 157 VMIRVKPGVDAHTHEFIATSHEDQKFGISLATGAAFDAAKAALESENLQLVGLHCHVGSS 216

Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDY-----------PVKD 213
             +   F    +      ++        ++ + LGGG      +Y            +  
Sbjct: 217 VFNAEGFKLAAERVLSLYKRIHTELGVALKELDLGGGFGIPYMEYEEALDVAKLAQDLLA 276

Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE--------NIKNLVIVDSSV 265
             +R     +     + +EPG ++V  +     +V  + +         I+  + VD  +
Sbjct: 277 AVERTAHELDIEPPFVLVEPGRSLVGASAVTVYSVGTVKDVETGKAELPIRRYLSVDGGM 336

Query: 266 EAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISF 320
             ++   L   E        + +  P  + V G  C +GDI          +  GD ++F
Sbjct: 337 SDNIRPALYESEYDVRVVNRFTDGEPVDSRVVGFHCESGDILVNERKLPGDITTGDLLTF 396

Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
                Y     + +NG   P +           +R  + +D   
Sbjct: 397 ATTGAYQYMMASRYNGALRPAVVSVRNGQANLMLRRETVDDLLA 440


>gi|172040373|ref|YP_001800087.1| hypothetical protein cur_0693 [Corynebacterium urealyticum DSM
           7109]
 gi|171851677|emb|CAQ04653.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
          Length = 462

 Score =  200 bits (509), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 52/404 (12%), Positives = 116/404 (28%), Gaps = 43/404 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +++D+    +            G ++  A K F +  +   + +       +SL E
Sbjct: 57  GTPSFVMDEADFRSRCREMAEAFGG-GERVHYASKAFISTAVCRWVAEEGLSLDVASLGE 115

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F  E    +     ++    AV +  + I+ +++ ++ +    A+ L   + 
Sbjct: 116 LRIALHADFPAERITVHGNNKNEEFLRAAVEAGVELIVIDSLQEIAELSRVARDLGTTQD 175

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
           + +R+ P V          +    + G         +  ++ + ++   + GL  H   +
Sbjct: 176 VLVRVTPGVHVDTHEFIATSHEDQKFGFSLASGKAKQAAEECLAADGLVLRGLHCHVGSQ 235

Query: 169 NKSFLCFSAMLKNIEKEF------GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
                 F    + +   +               + LGGG                +    
Sbjct: 236 VFDADGFVLAAERLLGLWKQLLSHEATGADFNVLDLGGGYGIAYTPDQEALDVASVARNL 295

Query: 223 EKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS------V 265
                         +  + +EPG AI          V  + +   +   V         +
Sbjct: 296 LAKVAEAAEEAGVPTPIVNVEPGRAIAGPAMVTIYRVGTVKDVETSDHTVRRYVSVDGGM 355

Query: 266 EAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISF 320
             ++   L   E          +       + G  C +GDI          V  GD ++ 
Sbjct: 356 SDNIRPALYQAEYDVRVVNREVSGTLVPTRIVGSHCESGDILINDVPVPDDVAPGDLLAI 415

Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
                Y  +  + +N    P +           IR     D   
Sbjct: 416 AATGAYCYSMSSRYNMFLRPPVITVADGQDRVMIRRERLEDILA 459


>gi|255690076|ref|ZP_05413751.1| diaminopimelate decarboxylase [Bacteroides finegoldii DSM 17565]
 gi|260624353|gb|EEX47224.1| diaminopimelate decarboxylase [Bacteroides finegoldii DSM 17565]
          Length = 386

 Score =  200 bits (509), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 64/366 (17%), Positives = 120/366 (32%), Gaps = 26/366 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           ++TP+Y  D + L + L      + K     +  A+K  A   +   + +   G    S 
Sbjct: 13  LQTPFYYYDTKVLRDTLSAINHEVAKYPNYSVHYAVKANANPKVLAIIRESGMGADCVSG 72

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115
            E+       F      +    K      +        FN  ++ +L    + A  Q   
Sbjct: 73  GEIRAAIRAGFPANKVVFAGVGKADWEINLGLEYGIFCFNVESIPELEVINELAAAQNKI 132

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168
             +  RINP V              ++ G   +D        +  +     GL FH   +
Sbjct: 133 ANVAFRINPDVGAHTHANITTGLAENKFGISMQDMDKVIDVALGMKNIKFIGLHFHIGSQ 192

Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-------DFCQRL 218
                 F+     +  ++ +       +E I++GGG+         +        F    
Sbjct: 193 ILDMGDFVALCNRVNELQDKLEAHRILVEHINVGGGLGIDYGHPNRQAIPNFKDYFATYA 252

Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL--Y 275
            +   +    ++ E G A+V    TL + VL + +  K    + D+ +   +   L   Y
Sbjct: 253 GQLKLRPYQTLHFELGRAVVGQCGTLISKVLYVKQGAKKKFAILDAGMTDLIRPALYQAY 312

Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
            +   +          V G  C + D+FG+      VK GD I+      Y     + +N
Sbjct: 313 HKMENLTSEEPMEAYDVVGPICESSDVFGKAIDLNKVKRGDLIALRSAGAYGEIMASGYN 372

Query: 336 GINMPT 341
              +P 
Sbjct: 373 CRELPK 378


>gi|313205431|ref|YP_004044088.1| diaminopimelate decarboxylase [Paludibacter propionicigenes WB4]
 gi|312444747|gb|ADQ81103.1| diaminopimelate decarboxylase [Paludibacter propionicigenes WB4]
          Length = 387

 Score =  200 bits (509), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 66/367 (17%), Positives = 123/367 (33%), Gaps = 25/367 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TP+Y  D + L   L+      K +   +  A+K      +   +     G    S  
Sbjct: 14  IETPFYYYDLEVLRKTLEEINIQSKKSDFHVHYAMKANVNPSVLAAIKDAGLGADCVSGG 73

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDK--AQKLHK 116
           EV              +    K      +  + D       ++ +L    +   A+    
Sbjct: 74  EVQAAIDAGISPSKVVFAGVGKADWEINLGLDNDIFCFNVESIPELEVINELAAAKNKVA 133

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCEN 169
           K+ LRINP+VS             ++ G    +  +            + G+ FH   + 
Sbjct: 134 KVALRINPNVSAHTHHYITTGLSENKFGINMSELDQVVDLFPTLSNVKLIGIHFHIGSQI 193

Query: 170 KS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSE 223
                F      +  +++ F      +E I++GGG+    +    +P+ DF    K F +
Sbjct: 194 TDLTSFQGLCVRVNELQEYFQSRNVVLEHINVGGGLGINYEHPNHFPIPDFDAYFKVFRD 253

Query: 224 KYS----VQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL--YQ 276
                    ++ E G A+V    +L + VL + + + K   I+D+     +   L   Y 
Sbjct: 254 HLQLLPNQTLHFELGRAVVAQCGSLISKVLYVKQGSSKKFAILDAGFTDLIRPALYQAYH 313

Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
               +  +       V G  C + D F +       K GD I+      Y     + +N 
Sbjct: 314 HIENLSSDLAVEPYDVVGPICESSDTFAKGFELNQTKRGDLIALRSAGAYGEIMASQYNL 373

Query: 337 INMPTIA 343
             +P   
Sbjct: 374 RKLPKAY 380


>gi|307825889|ref|ZP_07656104.1| Orn/DAP/Arg decarboxylase 2 [Methylobacter tundripaludum SV96]
 gi|307733008|gb|EFO03870.1| Orn/DAP/Arg decarboxylase 2 [Methylobacter tundripaludum SV96]
          Length = 380

 Score =  200 bits (509), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 101/366 (27%), Positives = 187/366 (51%), Gaps = 8/366 (2%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           +P +++D+ ++   L+    +R   G K+L ++K      + D    ++DG + SSL+E 
Sbjct: 13  SPAFVLDEIEVTKALEILAELRTQCGCKILYSIKSLPFSAVMDMAKPFVDGFSVSSLFEA 72

Query: 64  MLGHEKFGGE--THAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            L  E   G+   H      +  E+D +   C  I FN+++Q  ++ + A      IGLR
Sbjct: 73  RLADEVLAGQSSIHLTTPGIRQDELDELSLLCSHISFNSLTQHQRYSETA-GAQSSIGLR 131

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-VNGLMFHNNCENKSFLCFSAMLK 180
           +NP +S+      DP R  S+LG    +   S   + + GL  HN      F      ++
Sbjct: 132 VNPKLSFLHDERFDPCRQHSKLGVAIDELSHSICLDQIEGLHVHNVFSATDFTPLIKTIE 191

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +++  G  + Q+EW+++GGG  F       + F + + +    + V++Y+EPG+AIV  
Sbjct: 192 KLQQHLGAGLAQLEWLNIGGGYLFGQ-IEDHRPFVELVNKLKHDFGVEVYIEPGKAIVGR 250

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT--GPYTAMVCGRSCL 298
              L  TVLD   +    +++  +   H P+   YQ    ++ +   G Y A++ G +CL
Sbjct: 251 AGHLVATVLDRFVSDGETIVILDTSINHNPEVFEYQRQPELHEHDPDGQYAAILAGCTCL 310

Query: 299 AGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFS 358
           AGD+FG++ F++P+++GD++ F++V  Y + + N FNG N+P I + +    +K ++ + 
Sbjct: 311 AGDVFGQYRFKEPLEVGDKVVFKNVGAYTLIKANRFNGYNLPDIYL-SNSLRVKKMKHYD 369

Query: 359 YNDYYN 364
           Y DY  
Sbjct: 370 YQDYRR 375


>gi|313905720|ref|ZP_07839080.1| Orn/DAP/Arg decarboxylase 2 [Eubacterium cellulosolvens 6]
 gi|313469427|gb|EFR64769.1| Orn/DAP/Arg decarboxylase 2 [Eubacterium cellulosolvens 6]
          Length = 427

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 66/394 (16%), Positives = 126/394 (31%), Gaps = 29/394 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           + TP++L D++ +  N          N G +   A+K      +   L +Y  G   SS+
Sbjct: 19  VPTPFHLYDEKGIRENARAVKEAFSWNPGFREYFAVKATPTPALIKILGEYDCGCDCSSM 78

Query: 61  YEVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E+ML     F G    ++       E          I  +  + ++  +    KL K++
Sbjct: 79  TELMLSEAMGFDGNHIMFSSNDTPPEEYKKAADMGAIINLDDFTAIDIVEKTLGKLPKRM 138

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES----EIKNVNGLMFH------NNCE 168
             R NP   ++       N   S+ G       E+    + K V     H          
Sbjct: 139 SCRYNPGGLFALSNGIMDNPGDSKYGMTTDQLFEAFRVMKAKGVEEFGIHAFLASNTVTN 198

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
                    + K   +        + +I+L GG+    + +   +  + +    EK   +
Sbjct: 199 EYYPKLAEVLFKLAVQLQNVTGAHVTFINLSGGVGIPYEPWQEPNDIRAIGAGVEKVYNK 258

Query: 229 -----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
                      I+ E G  ++     L T  ++     K  + VD+     +   +    
Sbjct: 259 VLVPAGMDDVSIFAEMGRFMMGPYGALVTKAINEKHIYKEYIGVDACAVNLMRPAMYGSY 318

Query: 278 SATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                         +   V G  C   D F        +++GD +   D   +  +    
Sbjct: 319 HHITVLGKENAECDHKYDVTGSLCENNDKFAIDRMLPEIELGDILYIHDTGAHGFSMGYN 378

Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           +NG       +   DG+ + IR   +  DY+  L
Sbjct: 379 YNGKLWSAEVLLKEDGSFEVIRRPETPKDYFATL 412


>gi|33863330|ref|NP_894890.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT
           9313]
 gi|33640779|emb|CAE21234.1| Diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT
           9313]
          Length = 455

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 50/396 (12%), Positives = 106/396 (26%), Gaps = 34/396 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP Y++D+  L     +     +         + A K  ++  M   +     G    S
Sbjct: 48  GTPLYVLDEATLRAACQSYRGALQRHYPGPSLPIYASKANSSLMMSSLVASEGFGLDVVS 107

Query: 60  LYEVMLGHEK-FGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             E++   +    G+    +     D E+     N  TI+ +    L++           
Sbjct: 108 AGELLTALKGGVPGDCIVLHGNNKSDQELLLAYRNGVTIVADNQHDLDRLSQLVPVGADP 167

Query: 118 IGLRIN--PSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE 168
             L +   P +              S+ G             +      + GL  H   +
Sbjct: 168 AKLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQLESVLNQLLGCRWARLTGLHAHIGSQ 227

Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
                    +   +             +  +++GGG+                 +   + 
Sbjct: 228 IFELEPHQDLADVMAGALQLARRLGHPVMDLNVGGGLGVRYVSSDDPPSIDNWVKVVAEA 287

Query: 226 SVQ-----------IYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDY 272
             Q           +  EPG ++V         V         +  + VD  +  +    
Sbjct: 288 VNQACRSRNLDLPRLMCEPGRSLVAAAGVTLYRVGSRKTIPGLRTYLSVDGGMSDNPRPI 347

Query: 273 LLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
                      +    +   T  + G+ C +GD+  +         GD +       YN+
Sbjct: 348 TYQSLYTACLADRPLASPDETITLVGKHCESGDVLLKDLALPYASSGDVLVVFATGAYNV 407

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +  + +N I  P   + +   +    R     D   
Sbjct: 408 SMSSNYNRIPRPAAVLVHSGHSELVQRREQPEDLLR 443


>gi|212550815|ref|YP_002309132.1| diaminopimelate decarboxylase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212549053|dbj|BAG83721.1| diaminopimelate decarboxylase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 382

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 60/365 (16%), Positives = 109/365 (29%), Gaps = 25/365 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TP+Y  D + L   L   +         +  A+K      +   + +   G    S  
Sbjct: 12  LQTPFYFYDIELLRKTLQVVVLEAAKYDYHIHYAVKANKNPRILSIIREMGLGADCVSGG 71

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK--FKDKAQKLHKKI 118
           E+     E F  E   +    K      +    D   FN  S          A   +   
Sbjct: 72  EIETVLNEGFSAEKVVFAGVGKTDWEINLGLEKDIFCFNVESIPELVVINHLACAKNTIA 131

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN 169
              LRINP +              ++ G                    + G+ FH   + 
Sbjct: 132 RVALRINPEIDSHTHHYITTGIKDNKFGINLDQLDRVLDMLSTLSSIQLVGIHFHIGSQI 191

Query: 170 K---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------- 219
                F    + +  ++++F      ++ I+ GGG+    ++          +       
Sbjct: 192 MDLTPFRLLCSQVNELQQKFIQRGIFLKHINFGGGLGIDYENPDENPIPSFREYFNVFRT 251

Query: 220 EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL--YQ 276
            F    + QI+ E G +IV     L + VL + E      ++ D+     +       Y 
Sbjct: 252 HFFVLNNQQIHFELGRSIVGQCGNLISKVLYVKEGSVKRFVILDAGFTELIRPAFYESYH 311

Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
               +          V G  C + D F +    K    GD I+      Y     + +N 
Sbjct: 312 VIENLSLEEATDVYDVVGPICESSDCFAKQRVLKKTYRGDIIAIRSAGAYGEVMASQYNC 371

Query: 337 INMPT 341
             +P 
Sbjct: 372 RQLPK 376


>gi|120405303|ref|YP_955132.1| diaminopimelate decarboxylase [Mycobacterium vanbaalenii PYR-1]
 gi|119958121|gb|ABM15126.1| diaminopimelate decarboxylase [Mycobacterium vanbaalenii PYR-1]
          Length = 476

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 60/406 (14%), Positives = 126/406 (31%), Gaps = 45/406 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ID+                 G  +  A K F    +   +++       +S  E
Sbjct: 64  GTPVFVIDEADFRARCRDIAAAFGG-GEHVRYAAKAFLCTEVARWIDEEGLSLDVASGGE 122

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F  E  A +   K       AV +  + ++ ++++++++    A +    + 
Sbjct: 123 LAVALHAGFPAERIALHGNNKSVAELTAAVEAGIEHVVVDSMTEIDRLDKIAGEAGVVQD 182

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G            +   E++   + GL  H   +
Sbjct: 183 VLIRVTVGVEAHTHEFISTAHEDQKFGLSLASGAAMTAVRRVFETDHLRLVGLHSHIGSQ 242

Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F          +      F  +    +  + LGGG+  +   +        L +
Sbjct: 243 IFDVAGFELAAHRVIGLLRDAVAEFGVEKTSQMSIVDLGGGLGISYLPHDDPPPMGELAD 302

Query: 221 FSEKYSVQ-----------IYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDS 263
                              + +EPG AI    T     V  + +        +  V VD 
Sbjct: 303 KLHAIVRHESAAVGLPAPRLVVEPGRAIAGPGTITLYEVGTVKDVAISSDRNRRYVSVDG 362

Query: 264 SVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318
            +  ++   L   E      +   N  P  + V G+ C +GDI     +    V  GD +
Sbjct: 363 GMSDNIRTSLYDAEYDVRLVSRTSNAEPTLSRVVGKHCESGDIVVRDAWIPDDVGPGDLL 422

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
                  Y  +  + +N I  P +           +R  +++D  +
Sbjct: 423 GVAATGAYCYSMSSRYNLIGRPAVVAVRDGRARLILRRETFDDLLS 468


>gi|7573355|emb|CAB87661.1| diaminopimelate decarboxylase-like protein [Arabidopsis thaliana]
          Length = 496

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 61/394 (15%), Positives = 121/394 (30%), Gaps = 34/394 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+YL  K ++  NL+      +     +  A+K      + + L     G    S  E+ 
Sbjct: 98  PFYLYSKPQITRNLEAYKEALEGVRSVIGYAIKANNNLKILEHLRSLGCGAVLVSGNELR 157

Query: 65  LGH-EKFG--------GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK-- 113
           L     F                      ++         +  ++   LN   + ++   
Sbjct: 158 LALLAVFDHVFGVDEMNRCIFNGNGKSLEDLVLAAQEGVFVNVDSEFDLNNIVEASRISG 217

Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHN 165
               + LRINP V              S+ G + +       +         + G   H 
Sbjct: 218 KQVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDEVKAHPKELKLVGAHCHL 277

Query: 166 NCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKD-----YPVKDFCQR 217
                    F      + +          ++ ++++GGG+               D    
Sbjct: 278 GSTITKVDIFRDAAVLMIEYIDEIRRQGFEVSYLNIGGGLGIDYYHAGAVLPTPMDLINT 337

Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQ 276
           ++E      + + +EPG +++ NT      V  +  N  KN +++D S+   +   L   
Sbjct: 338 VRELVLSRDLNLIIEPGRSLIANTCCFVNHVTGVKTNGTKNFIVIDGSMAELIRPSLYDA 397

Query: 277 ESATIYPNTGPYT-----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                  +  P         V G  C + D  G+         G  +   D   Y ++  
Sbjct: 398 YQHIELVSPTPPEAEVTKFDVVGPVCESADFLGKDRELPTPPQGAGLVVHDAGAYCMSMA 457

Query: 332 NWFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           + +N    P       DG+I  IR   +++D+  
Sbjct: 458 STYNLKMRPPEYWVEEDGSITKIRHAETFDDHLR 491


>gi|91772657|ref|YP_565349.1| diaminopimelate decarboxylase [Methanococcoides burtonii DSM 6242]
 gi|91711672|gb|ABE51599.1| Orn/DAP/Arg decarboxylase family / TabA-like [Methanococcoides
           burtonii DSM 6242]
          Length = 420

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 60/393 (15%), Positives = 111/393 (28%), Gaps = 31/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+++ D++ +  N            G +   A+K      +   L     G   SSL 
Sbjct: 21  PTPFHIYDEKAIRTNARKLKDAFSIVEGFQEFFAVKALPNPYILKILKSEGFGADCSSLP 80

Query: 62  EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E++L       GE   ++       E          I  + +S +   + +A+       
Sbjct: 81  ELLLAEKTGIVGENIMFSSNDTPAEEFVKAKELGAIINLDDISHIEFLEKEAELPELVC- 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK----IESEIKNVNGLMFHNNCENKSFLCF 175
                     +      N   ++ G   K         + K V     H    +      
Sbjct: 140 -FRFNPGPLKEGNAIIGNPEEAKYGFTKKQLFEGYRMLKEKGVKRFGLHTMVASNELEPS 198

Query: 176 SAM------LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
             +       + I +       + ++++LGGGI    +          + E       + 
Sbjct: 199 YFVETAKLLFEVIVEISNELDIRFDFVNLGGGIGIPYRLDQEAVPYDVIAEGVRDEYEKS 258

Query: 230 Y-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                       LE G  I      L T V  +    K+ V  D+ +   +   L     
Sbjct: 259 IKANGLDPLKIYLECGRTITGPYGYLVTEVRHLKHIYKDYVGTDACMANLMRPGLYGAYH 318

Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                            V G  C   D F        V+ GD ++  D   +       +
Sbjct: 319 HITVLGKENKPEDHLYDVTGSLCENNDKFAIDRMLPEVERGDILAIHDSGAHGHAMGFNY 378

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       +   D ++  IR   +  D++  L
Sbjct: 379 NGKLRSAELLLREDSSVVQIRRAETIEDHFVTL 411


>gi|302205971|gb|ADL10313.1| diaminopimelate decarboxylase [Corynebacterium pseudotuberculosis
           C231]
 gi|308276206|gb|ADO26105.1| diaminopimelate decarboxylase [Corynebacterium pseudotuberculosis
           I19]
          Length = 443

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 58/402 (14%), Positives = 123/402 (30%), Gaps = 41/402 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +++D+    +           A  K+  A K F    +   + +       +SL E
Sbjct: 39  GTPVFVVDEDDFRDRCKDMAAAFGGAE-KVHYASKAFLTRRIARWVEEEGLNLDIASLGE 97

Query: 63  VMLGH-EKFGGETHA-YNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKL--HKK 117
             +     F       +     +  +  ++S+    I+ +++++L + +  A +    + 
Sbjct: 98  FQVALSANFPPGRITAHGNNKSEEFLRVLVSHRVGHIVIDSMTELERLEKIAAEAGVTQP 157

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNNCE 168
           + +R+ P +          +    + G            K  IES    + GL  H   +
Sbjct: 158 VMVRVKPGIEAHTHEFIATSHEDQKFGFSLASGSAYAAAKRVIESASLYLIGLHCHVGSQ 217

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY-----------PVKD 213
                 F      +L    K        +E + LGGG      +             +  
Sbjct: 218 VFDAQGFSLAAQRVLTLYSKIHSELGIDLEQLDLGGGYGIAYTEDETPLDVTSVAQDLLA 277

Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS------VEA 267
               +    +  + ++ +EPG AI   +T    +V  + +       +         +  
Sbjct: 278 AVDDVARTLDIDAPEVLVEPGRAIAGPSTVTVYSVGTVKDVHVTDKQLRRYIAVDGGMSD 337

Query: 268 HVPDYLL---YQESATIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFED 322
           ++   L    Y          G    + + G  C AGDI          +  GD I+   
Sbjct: 338 NIRPALYEAEYDVRVINRNVAGDLVPSRIVGSHCEAGDILIHDRELPSGIIEGDLIALAA 397

Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              Y     + +N +  P +       +   +R  +  D   
Sbjct: 398 TGAYCFAMSSRYNMMGRPAVVSVKAGQSRVMVRRETIEDLLA 439


>gi|300858250|ref|YP_003783233.1| diaminopimelate decarboxylase [Corynebacterium pseudotuberculosis
           FRC41]
 gi|300685704|gb|ADK28626.1| Diaminopimelate decarboxylase [Corynebacterium pseudotuberculosis
           FRC41]
 gi|302330524|gb|ADL20718.1| diaminopimelate decarboxylase [Corynebacterium pseudotuberculosis
           1002]
          Length = 443

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 58/402 (14%), Positives = 123/402 (30%), Gaps = 41/402 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +++D+    +           A  K+  A K F    +   + +       +SL E
Sbjct: 39  GTPVFVVDEDDFRDRCKDMAAAFGGAE-KVHYASKAFLTRRIARWVEEEGLNLDIASLGE 97

Query: 63  VMLGH-EKFGGETHA-YNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKL--HKK 117
             +     F       +     +  +  ++S+    I+ +++++L + +  A +    + 
Sbjct: 98  FQVALIANFPPGRITAHGNNKSEEFLRVLVSHRVGHIVIDSMTELERLEKIAAEAGVTQP 157

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNNCE 168
           + +R+ P +          +    + G            K  IES    + GL  H   +
Sbjct: 158 VMVRVKPGIEAHTHEFIATSHEDQKFGFSLASGSAYAAAKRVIESASLYLIGLHCHVGSQ 217

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY-----------PVKD 213
                 F      +L    K        +E + LGGG      +             +  
Sbjct: 218 VFDAQGFSLAAQRVLTLYSKIHSELGIDLEQLDLGGGYGIAYTEDETPLDVTSVAQDLLA 277

Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS------VEA 267
               +    +  + ++ +EPG AI   +T    +V  + +       +         +  
Sbjct: 278 AVDDVARTLDIDAPEVLVEPGRAIAGPSTVTVYSVGTVKDVHVTDKQLRRYIAVDGGMSD 337

Query: 268 HVPDYLL---YQESATIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFED 322
           ++   L    Y          G    + + G  C AGDI          +  GD I+   
Sbjct: 338 NIRPALYEAEYDVRVINRNVAGDLVPSRIVGSHCEAGDILIHDRELPSGIIEGDLIALAA 397

Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              Y     + +N +  P +       +   +R  +  D   
Sbjct: 398 TGAYCFAMSSRYNMMGRPAVVSVKAGQSRVMVRRETIEDLLA 439


>gi|224024547|ref|ZP_03642913.1| hypothetical protein BACCOPRO_01273 [Bacteroides coprophilus DSM
           18228]
 gi|224017769|gb|EEF75781.1| hypothetical protein BACCOPRO_01273 [Bacteroides coprophilus DSM
           18228]
          Length = 386

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 77/365 (21%), Positives = 127/365 (34%), Gaps = 26/365 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           ++TP+Y  D   L + LDT      K     +  A+K  A   +   + +   G    S 
Sbjct: 13  LETPFYYYDTNLLRHTLDTIRKEAGKYNKFCVHYAVKANANPKVLSIIRESGLGADCVSG 72

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHKK 117
            E+       F      Y    K      +  + D   FN  +V +L    + A    K 
Sbjct: 73  GEIKAAIKAGFPANKIVYAGVGKTDAEINLGLDYDIFCFNVESVPELEVINELATAKGKI 132

Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168
                RINP V              ++ G   KD        +E    N  GL FH   +
Sbjct: 133 ARVAFRINPDVGAHTHANITTGLAENKFGISMKDMDHVIDRALEMNNINFVGLHFHIGSQ 192

Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD---YPVKDFCQRLKEFS 222
                 F      +  ++++       +E I++GGG+          PV DF    + + 
Sbjct: 193 ILDMGDFTALCNRINELQEKLYARQIIVEHINVGGGLGIDYAHPNRQPVPDFASYFETYH 252

Query: 223 EKY----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL--Y 275
           +         ++ E G ++V    +L T V+ + +   K   IVD  +   +   L   Y
Sbjct: 253 KHLKLRPQQTLHFELGRSVVGQCGSLITKVIYVKQGTNKQFAIVDGGMTDLIRPALYQAY 312

Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
            +   I  +    T  V G  C + D+FG+      VK GD I+      Y     + +N
Sbjct: 313 HKIENITSDEATETYDVVGPICESSDVFGKAIDLNKVKRGDLIALRSAGAYGEIMASGYN 372

Query: 336 GINMP 340
              +P
Sbjct: 373 CRQLP 377


>gi|239628236|ref|ZP_04671267.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239518382|gb|EEQ58248.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 422

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 63/391 (16%), Positives = 119/391 (30%), Gaps = 29/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+YL D++ +  N          N G K   A+K      + + L +   GT  SS+ 
Sbjct: 20  PTPFYLYDEKGIRENAAKLKQAFAWNKGYKEYFAVKATPNPFLLNLLKEMGCGTDCSSMT 79

Query: 62  EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+M+     F G    ++       E          I  + ++ +   +     + + I 
Sbjct: 80  ELMMSKACGFNGHDIMFSSNDTPPEEFAYAEKLGAIINLDDITHIECLEQTLGYIPETIS 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSFL 173
            R NP   +        N   S+ G   +   ++     +      G+         +  
Sbjct: 140 CRYNPGGVFKVSNDIMDNPGDSKYGMTTEQIFQAFKMLKDKGAKHFGIHAFLASNTVTVE 199

Query: 174 CFSAM----LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
            +  +     +   K        +E+I+L GGI    +     +    + +   K   + 
Sbjct: 200 YYPMLAKILFELAVKLQEETGAHVEFINLSGGIGIPYRPDQEPNDILAIGDGVRKVYEEV 259

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     I  E G  ++     L T  +      K  V VD+     +   +     
Sbjct: 260 LVPAGMDDVAICTELGRFMMGPYGALVTKAIHEKHTHKEYVGVDACAVNLMRPAMYGAYH 319

Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                            V G  C   D F        ++ GD +   D   +       +
Sbjct: 320 HITVMGKEDEPCGHMYDVVGSLCENNDKFAIDRMLPEIRKGDLLFIHDTGAHGFAMGYNY 379

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   DG+++ IR   +  DY+ 
Sbjct: 380 NGKLKSAELLLKQDGSVEMIRRAETPEDYFA 410


>gi|300712120|ref|YP_003737934.1| diaminopimelate decarboxylase [Halalkalicoccus jeotgali B3]
 gi|299125803|gb|ADJ16142.1| diaminopimelate decarboxylase [Halalkalicoccus jeotgali B3]
          Length = 409

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 58/381 (15%), Positives = 118/381 (30%), Gaps = 28/381 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D  ++  N             +++ A K   A  +  TL+    G   +S  E
Sbjct: 24  GTPLYVQDLDRVRENYARMAAAFPE--GRVMYAAKANTAKTVLGTLSDAGAGIECASAGE 81

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVS------QLNKFKDKAQKLH 115
           V          E   Y         +A L    +I  +           +     A++  
Sbjct: 82  VERALAAGCLPERVQYTAVNPP---EADLDYAVSIADDHPELTITAGAEDTIDRLAERGF 138

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-----SEIKNVNGLMFHNNCEN- 169
                        +           ++ G   +   +      E  +V G+  H      
Sbjct: 139 SGRLCLRVNPGVGAGHHEKVSTGANAKFGVPIERAPDLLDKADERFDVVGIHAHAGSGIS 198

Query: 170 -KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK 224
            +       ++  + +        +E++ +GGG         +   ++   +  +E   +
Sbjct: 199 GEDLAAHRELVSRMGELARRTDLDLEFVDVGGGFGVPYREGEEPLDLQAVARATREALGE 258

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIYP 283
               + +EPG  +V +   L T V  +    +  +V VD+ +       +          
Sbjct: 259 VEATLAVEPGRYLVADAGVLLTRVNTVKPAGEELVVGVDAGMTTLARPAIYGAHHGIRSL 318

Query: 284 NTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
             G      A V G  C +GD+FGE+      + GD ++  +   Y     + +N    P
Sbjct: 319 AEGERETVEATVTGPICESGDVFGEYD-LPAPERGDLLAVGNAGAYGYEMASQYNSRPRP 377

Query: 341 TIAVKNVDGTIKAIREFSYND 361
              V + + +    R  +  D
Sbjct: 378 ATVVVDGENSGVDRRRETLAD 398


>gi|296445377|ref|ZP_06887335.1| diaminopimelate decarboxylase [Methylosinus trichosporium OB3b]
 gi|296257138|gb|EFH04207.1| diaminopimelate decarboxylase [Methylosinus trichosporium OB3b]
          Length = 422

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 61/387 (15%), Positives = 103/387 (26%), Gaps = 27/387 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y      +  +              +  A+K  +   +   L     G    S  E+ 
Sbjct: 28  PFYCYSAATIRRHFTVFSAAFAGLDALVCYAVKANSNQAVLALLAGLGAGMDVVSGGELR 87

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK----KIG 119
                        ++   K  +  A+  +     FN  S+       A    K     I 
Sbjct: 88  RARAAGVPASKITFSGVGKTAQEIALAIDEGIFCFNVESEPELEAIAAIAAAKGRRAHIS 147

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCENKSF 172
           LR+NP V              ++ G                   ++ G+  H   +    
Sbjct: 148 LRVNPDVDAKTHAKISTGLAENKFGVPLSRARDIYAQAARLPGLDIVGVDMHIGSQITDL 207

Query: 173 LCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDK------DYPVKDFCQRLKEFSE 223
             F A    + +           I  + LGGG+            Y    + + ++    
Sbjct: 208 RPFDAAFSLLAELVVGLRADGHAISHVDLGGGLGIPYHAGEDPASYHPDRYAEIVRRHMG 267

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIY 282
               ++  EPG  IV N   L T VL + +   K  VIVD+ +   V   L       I 
Sbjct: 268 ALGCKLLFEPGRLIVGNAGVLVTRVLYVKQGEAKTFVIVDAGMNDLVRPTLYDAWHEIIP 327

Query: 283 PNT-----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                       A V G  C  GD             GD ++      Y   +   +N  
Sbjct: 328 VTEPARGRNEILADVVGPVCETGDYIALGRSIPAPAQGDLLAVLTSGAYGAVQAGTYNSR 387

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
            +    + +           S      
Sbjct: 388 PLIPEVLVDGARWAVVRARPSIESLIA 414


>gi|253990743|ref|YP_003042099.1| diaminopimelate decarboxylase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253782193|emb|CAQ85357.1| Diaminopimelate decarboxylase [Photorhabdus asymbiotica]
          Length = 445

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 56/400 (14%), Positives = 121/400 (30%), Gaps = 46/400 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D + ++  +             +  A K  +   +   + +Y     + SL E
Sbjct: 25  GTPLWVYDSETIIQKIKLLCQFDV-----VRFAQKACSNTHILRLMREYGVKVDAVSLGE 79

Query: 63  VMLG-HEKFGG----ETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
           +       F          +     D      ++     +   ++  L        +   
Sbjct: 80  IERALRAGFCPGQAESDIVFTADLIDGPTLQQVTKLGIPVNAGSIDMLEHIGR--YRKGH 137

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170
            + LRINP   +      +     S+ G   +D       I      + GL  H      
Sbjct: 138 PVWLRINPGFGHGHSQKTNTGGENSKHGIWYQDLPLAIEKIRHYELKLLGLHMHIGSGVD 197

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK------ 224
            +   +++   + ++       I+ IS GGG+    +    +          +       
Sbjct: 198 -YQHLASVCDAMVEQVILCGEDIQAISAGGGLSTPYQQGDERINIAHYFGLWDDARKRIE 256

Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA 279
               + V++ +EPG  +V  +  L + V  +     +N V+VD+     +   +      
Sbjct: 257 QHLGHKVELEIEPGRFLVAESGVLMSEVRAVKQMGSRNYVLVDAGFNDLMRPVMYGSYHH 316

Query: 280 TIYPNTGP--------YTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324
                              +V G  C +GD+F +            PV++GD + F D  
Sbjct: 317 ISVLPADGRKIEQLPLQETLVAGPLCESGDVFTQVEGGGVAPRMLPPVQVGDYLVFHDTG 376

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            Y  +  + +N   +    +          R  +  +   
Sbjct: 377 AYGASMSSNYNSRPLIPEVLFINGKFRLIRRRQTIEELLA 416


>gi|228476511|ref|ZP_04061201.1| diaminopimelate decarboxylase [Streptococcus salivarius SK126]
 gi|228251932|gb|EEK10978.1| diaminopimelate decarboxylase [Streptococcus salivarius SK126]
          Length = 417

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 64/393 (16%), Positives = 120/393 (30%), Gaps = 31/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   ++  
Sbjct: 20  PTPFHLYDEKGIRETARAVNAAFSWNPGFKEFFAVKATPNPAILKILKEEGCGVDCATDT 79

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKI 118
           E+++  +  F     ++     D   +  +   D      +           A  L + +
Sbjct: 80  ELVMSKKIGFDSSAISFTSN--DTRAEEFVYARDINATINLDAYEDIFFLEEAAGLPETL 137

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKI----ESEIKNVNGLMFH------NNCE 168
            LR NP   +S       +   S+ G   +         + K V     H          
Sbjct: 138 SLRFNPGGVFSLGTDIMDHPEESKFGMTKEQLFKGYAYLKEKGVKSFGLHAFLASNTVTN 197

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY--- 225
                  + + +   +        +++I+L GG+         ++    + E        
Sbjct: 198 EYYPTLAAQLFELAVEIKNELGVSLDFINLSGGVGVDYTPANKQNDIAVIGEGVHAKFDE 257

Query: 226 --------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
                    + IY E G  +      + T VL I +  +  V VD+S    +   +    
Sbjct: 258 ILVPNGLGHISIYTELGRFMTAPHGLVVTKVLHIKDTYRRYVGVDASAVNLLRPAMYDAY 317

Query: 278 SATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                            V G  C   D F +       +IGD +   D   +  +    +
Sbjct: 318 HHITNMTNPDGDIQVVDVTGSLCENNDKFAKNRELPEARIGDTLVIHDTGAHGFSMGYNY 377

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       +   DGT + IR   + NDY+  L
Sbjct: 378 NGRLRSAEILYQEDGTARMIRRAETMNDYFATL 410


>gi|328947721|ref|YP_004365058.1| Diaminopimelate decarboxylase [Treponema succinifaciens DSM 2489]
 gi|328448045|gb|AEB13761.1| Diaminopimelate decarboxylase [Treponema succinifaciens DSM 2489]
          Length = 422

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 66/394 (16%), Positives = 117/394 (29%), Gaps = 30/394 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+Y+ D++ +  N+                 A+K      +   L     G   SSL 
Sbjct: 20  PTPFYIYDEKAIRENVKYFYKAFSIFPSFTEYFAVKALPNPYILKVLESEGCGGDCSSLP 79

Query: 62  EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKD-KAQKLHKKI 118
           E+ML       G    +        E          I  + ++ ++  K+    KL   I
Sbjct: 80  ELMLCEKSGITGRRIMFTSNDTPAQEFVYAQKLGAIINLDDITHIDFLKNALGGKLPDTI 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFHNNCENK---- 170
             R NP                ++ G   +  I +      + V     H    +     
Sbjct: 140 CFRYNPGPLKEGGNSIIGKPEEAKYGLTKEQMIHAYKICKAEGVKHFGIHTMVASNELNP 199

Query: 171 --SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK 224
                    + + I +        IE+  +GGG+        K   +    + +K   +K
Sbjct: 200 DFFVDTARIVFELILEVQKECGVNIEFADIGGGVGIPYRPGQKKVDLDYVAKGIKVLYDK 259

Query: 225 YSVQ-------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
             V        +  E G  I      L T  +      +N + VD+S+   +   +    
Sbjct: 260 MIVPAGLDPLKLCFECGRPITGPYGWLVTKAIHEKNIYRNYIGVDASMADLMRPGMYGAY 319

Query: 278 SATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                         Y   V G  C   D F        +++GD +   D   +       
Sbjct: 320 HEVTVSGKENAPKDYVYDVSGSLCENCDKFAVQRNLPKIEMGDLLIIHDAGAHGRAMGFN 379

Query: 334 FNGINMPTIAVKNVDGTI-KAIREFSYNDYYNNL 366
           +NG       +   DGT+ +  R  +  DY+  L
Sbjct: 380 YNGKLRAGELLLRSDGTVKEIRRRETIEDYFATL 413


>gi|103485699|ref|YP_615260.1| diaminopimelate decarboxylase [Sphingopyxis alaskensis RB2256]
 gi|98975776|gb|ABF51927.1| diaminopimelate decarboxylase [Sphingopyxis alaskensis RB2256]
          Length = 419

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 59/375 (15%), Positives = 114/375 (30%), Gaps = 23/375 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           I TP Y+  +  L  +        ++     +  A+KC    G+   L +   G    S 
Sbjct: 25  IGTPVYVYSRATLERHAQVFADALRDIPRKHIAFAIKCNPNLGVLRVLARQGYGADVVSG 84

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF----KDKAQKLH 115
            E+          E   ++   K     A   +     FN   +           A+++ 
Sbjct: 85  GELERALAAGMAAEDIVFSGVGKTRAELAQGLDRGIGQFNIEHEPEGVALSEIAVAKEMT 144

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCE 168
            +  LR+NP V           +  ++ G           +        + G+  H   +
Sbjct: 145 ARAVLRVNPDVDAGTHAKISTGKAENKFGVGIDSAPAIFDRLSALPGLKMRGVALHIGSQ 204

Query: 169 NKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD----FCQRLKEF 221
             S     A  + +     +       I  + LGGG+    +          +   +   
Sbjct: 205 LTSLDPLEAAFERVGRLVADLRAAGHSITHVDLGGGLGVPYRPEDNPPTPAEYGAMVARV 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280
           ++ + V +  EPG  I  NT  L T VL +     +  ++ D+++       L       
Sbjct: 265 TKDWDVTLMFEPGRVIAGNTGVLLTEVLWVKPGATHPFVIVDAAMNDLARPALYDAWHDF 324

Query: 281 IYPNTGPYTAM--VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
           +         +  + G  C  GD F        V+ G    F     Y     + +N  +
Sbjct: 325 VAVKPTGEKMIASIVGPVCETGDTFARDREIDAVQPGALAVFRTAGAYGATMASTYNSRS 384

Query: 339 MPTIAVKNVDGTIKA 353
           +    + + D  I  
Sbjct: 385 LVPEVLVDGDRYITV 399


>gi|162447649|ref|YP_001620781.1| diaminopimelate decarboxylase [Acholeplasma laidlawii PG-8A]
 gi|161985756|gb|ABX81405.1| diaminopimelate decarboxylase [Acholeplasma laidlawii PG-8A]
          Length = 420

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 66/398 (16%), Positives = 129/398 (32%), Gaps = 36/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           +TP Y+ D+  +       +   ++  V   ++ A K F    M   +          S 
Sbjct: 17  QTPLYIYDEAAIRKQCKVFINKFRHPKVSSNVIYASKAFLTIAMAQLIMSEGLHLDCVSQ 76

Query: 61  YEVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL-HK 116
            E+       F  E    +   K  D  + A+     TII +   + +   +        
Sbjct: 77  GELYTALKAGFPVEKIVLHGNNKTKDELLMALNFRVGTIIVDNDYEASILNEIVNDKYKV 136

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNC 167
            + LR+NP +          +   S+ G    D           ++   N  G   H   
Sbjct: 137 SVMLRVNPGIDAHTHKYIKTSTLDSKFGMSILDPRTKETIKSLNDNPNINFLGTHSHIGS 196

Query: 168 ENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL----- 218
           +       +     +LK  ++    +   ++ ++LGGG          +    ++     
Sbjct: 197 QILEEHSFYDHAITILKFYKEIKELYQIDLKAVNLGGGFGVKYIKSDTRLDLNKVLPELL 256

Query: 219 ------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDIS--ENIKNLVIVDSSVEAHVP 270
                     E     +Y+EPG +IV        TV  I    N K  + +D ++  H+ 
Sbjct: 257 EIVYQTANSLEISVPHVYIEPGRSIVAEAGYTLYTVNQIKETINKKKYLFIDGAMNDHMR 316

Query: 271 DYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
             L   +               T  V G++C +GDI  E       K  D +       Y
Sbjct: 317 TALYQAKYDAFIVGKEDMVHDTTYTVAGKACESGDIIIEDILLPDAKPDDLLVVRTTGAY 376

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           + +  + +N + +P +       +   +R+ S+ D  +
Sbjct: 377 HYSMASHYNRLTIPPVIFVKDGQSKVVVRKESFMDLLS 414


>gi|288573425|ref|ZP_06391782.1| diaminopimelate decarboxylase [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288569166|gb|EFC90723.1| diaminopimelate decarboxylase [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 426

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 57/399 (14%), Positives = 120/399 (30%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++ + +L   +         +   V++L A K F    M   +     G    S 
Sbjct: 19  GTPLYVMSETELRRRMRAVKRAFSERYEDVEVLYAGKAFLPRAMCALVKSEGLGLDVVSS 78

Query: 61  YEVMLGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E   ++   K  +    A+       + +   +L+     A++   +
Sbjct: 79  GEIHTAVSVGFPMERAYFHGNNKTAEDLTMAMDVGVGRFVVDNRDELDLLASMAEERKTE 138

Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
           +    R+ P VS              + G                ++    + G  FH  
Sbjct: 139 VSVLFRLAPGVSGDTHRYIQTAHTDCKFGMPLLGEGLRDCVDTATKAPYVKLLGFHFHVG 198

Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---------- 212
            +             +   ++        + + +++GGGI         +          
Sbjct: 199 SQLMENRAYLEALEVLGDLMKTLREENGFETKELNIGGGIGIPYGKGQREVDLDFFLGCI 258

Query: 213 -DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            +  +R+         ++ +EPG  I   +      V  + E       V     +  + 
Sbjct: 259 VETAERICSERGMARPRLVIEPGRWIAGPSGITLYRVGTVKEIPGIRTYVSVDGGMADNP 318

Query: 270 PDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   E   +      +       V GR C +GDI  +       + GD ++  D   
Sbjct: 319 RPSLYQAEYRCVLANRLDDPADSVVTVAGRCCESGDILIKDAELPLPERGDVVAVFDTGA 378

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           YN +  + +N +  P + +         +   S++D   
Sbjct: 379 YNFSMASGYNRLRRPAVVLVKDGEARCIVERQSFDDLIK 417


>gi|332826772|gb|EGJ99589.1| diaminopimelate decarboxylase [Dysgonomonas gadei ATCC BAA-286]
          Length = 385

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 68/371 (18%), Positives = 121/371 (32%), Gaps = 25/371 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TP+Y  D   L   L       K  G     A+K  A   + + +     G    S  
Sbjct: 14  IETPFYYYDMDLLKRTLKIVKEETKKYGFVQHYAVKANANRRILELIASEGFGADCVSGN 73

Query: 62  EVMLG-HEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116
           EV    +  F      +    K  +    A+  N       ++ +L    + A K  K  
Sbjct: 74  EVKAAVNAGFPASKIVFAGVGKTDKEINLALDLNIFCFNVESLPELEVINELASKKGKLA 133

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCEN 169
           ++ LRINP+V              ++ G          +     +   + G+ FH   + 
Sbjct: 134 QVALRINPNVDAHTHEYITTGLNENKFGFAMAHLDAVIEKLKSLKAIKLIGIHFHIGSQI 193

Query: 170 KSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL-------K 219
           +    F  + + +   +  F     ++E I+LGGG+    ++                 K
Sbjct: 194 EEAETFEPLCERVNELQVYFEEKEIKLEHINLGGGLGIDYENPDAHPVSDFAGYFALFNK 253

Query: 220 EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL--YQ 276
               +     + E G +IV     L T    +     K  VIVD+ +   +   L   Y 
Sbjct: 254 SLKLRDGQIAHFELGRSIVAQCGALVTRTTYVKHGENKVFVIVDAGMTDLIRPALYQAYH 313

Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
           +   I  N       V G  C + D+F + +     + GD +       Y     + +N 
Sbjct: 314 KIENISSNLTVKKYDVVGPICESSDVFAKDYELNETQRGDILVLRSAGAYGEIMASQYNC 373

Query: 337 INMPTIAVKNV 347
             +P     + 
Sbjct: 374 RELPKPYYSDK 384


>gi|212709365|ref|ZP_03317493.1| hypothetical protein PROVALCAL_00401 [Providencia alcalifaciens DSM
           30120]
 gi|212688277|gb|EEB47805.1| hypothetical protein PROVALCAL_00401 [Providencia alcalifaciens DSM
           30120]
          Length = 419

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 58/400 (14%), Positives = 124/400 (31%), Gaps = 46/400 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D + +++ +             +  A K  +   +   + +      S SL E
Sbjct: 25  GTPVWVYDSEVIIDRIGQLK-AFD----TVRFAQKACSNIHILRLMREQGVKVDSVSLGE 79

Query: 63  VMLGH-EKFGGET----HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
           +       F          +     D      ++  D  +   ++  L +  +   K   
Sbjct: 80  IERALVAGFQPGREKSEIVFTADVLDPATLLKVTELDIPVNAGSIDMLQQIGE--HKAGH 137

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170
            + LRINP   +      +     S+ G   +D       I+     + G+  H      
Sbjct: 138 PVWLRINPGFGHGHSQKTNTGGENSKHGIWHQDLPEALAKIQQYNLKLVGIHMHIGSGVD 197

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK------ 224
            +   + +  ++ +        I+ IS GGG+    +++      Q      +       
Sbjct: 198 -YQHLANVCDSMVELVVSAGVDIDAISAGGGLSTPYREHDEIIDVQHYYSLWDNARQRIE 256

Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA 279
               + +++ +EPG  +V  +  L   V  +     ++ V+VDS     +   +      
Sbjct: 257 LHLGHHIELEIEPGRYLVAESGVLLAQVRAVKDMGSRHYVLVDSGFNDLMRPAMYGSYHH 316

Query: 280 TIYPNTGP--------YTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVA 324
                              +V G  C +GD+F        E      VK+GD + F D  
Sbjct: 317 ISVLPADGSSVDSQPLKETIVAGPLCESGDVFTQLEGGMVETRLLPDVKVGDYLVFHDTG 376

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            Y  +  + +N   +    +          R  +  +   
Sbjct: 377 AYGASMSSNYNSRPLLPEVLFVDGKPTLIRRRQTIQELLA 416


>gi|208779489|ref|ZP_03246834.1| diaminopimelate decarboxylase [Francisella novicida FTG]
 gi|208744450|gb|EDZ90749.1| diaminopimelate decarboxylase [Francisella novicida FTG]
          Length = 394

 Score =  200 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 64/372 (17%), Positives = 120/372 (32%), Gaps = 30/372 (8%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           TP Y+ D + L +    A           ++  A+K      + D   +Y  G    S  
Sbjct: 23  TPCYIYDLELLEDTFLNAKKSLDKNFKNAEIHYAIKANHNPKIVDIAKKYGMGIDCVSGG 82

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK--FKDKAQKLHKK- 117
           E+    E K   +   +    K      +  + D   FN+ S          AQ+ +K+ 
Sbjct: 83  EIKRALEQKVDSQHIVFAGVGKADWEIELAIDNDIFAFNSESLEEIQVINQIAQRKNKQV 142

Query: 118 -IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE--------IKNVNGLMFHNNCE 168
            I LR+NP++           +   + G    D +             N+ GL +H   +
Sbjct: 143 NICLRVNPNIDAQTHHYISTGQFDDKFGIAFVDILNWLKDEYRNFANINIIGLHYHVGSQ 202

Query: 169 NKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLK 219
             ++  F           K        I+ I+ GGG+                 +  R +
Sbjct: 203 ILNYQVFQSLAITTNEHIKLLRQNDINIKHINFGGGLGIDYQNPQQNPIVDFDGYFARFR 262

Query: 220 EFSEKYSV-QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQE 277
           EF E      ++ E G ++V  +  L + VL        + VI+D+ +   +   L   +
Sbjct: 263 EFFEYCDELTLHFELGRSLVGQSGVLVSQVLFNKVTQGTHFVIIDAGMTELIRPALYQAQ 322

Query: 278 S----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                             + G  C + D+F +++    +K GD ++      Y     + 
Sbjct: 323 HKIAALIDENINQKQHYHIVGPICESSDVFAKYYQLPKLKRGDLLAIYSAGAYGKVLASE 382

Query: 334 FNGINMPTIAVK 345
           +N          
Sbjct: 383 YNLRPSVQEYFI 394


>gi|302529808|ref|ZP_07282150.1| diaminopimelate decarboxylase [Streptomyces sp. AA4]
 gi|302438703|gb|EFL10519.1| diaminopimelate decarboxylase [Streptomyces sp. AA4]
          Length = 479

 Score =  200 bits (508), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 55/414 (13%), Positives = 120/414 (28%), Gaps = 53/414 (12%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +++D+    +          +    +  A K F +  +   + +        S  E
Sbjct: 64  GTPLFVVDEADFKSRCADYAEAFDDP-ALVHYASKAFLSVEVARWVAEQGLSLDVCSGGE 122

Query: 63  VMLG-HEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           + +     F  E   ++   K       AV +   T++ ++  ++ +  + A   ++ +K
Sbjct: 123 LAVALRANFPVERITFHGNNKSVAELDAAVEAGVGTVVVDSYYEIARLAEIAAAHEIEQK 182

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G         E  +  + +    + GL  H   +
Sbjct: 183 VLVRVTVGVEAHTHEFIATAHEDQKFGFSLASGDAAEAVRRVLNAPSLKLVGLHSHIGSQ 242

Query: 169 NKSFLCFSAMLKNIEKEFG--------HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F    + +               + Q+  + LGGG      +        ++  
Sbjct: 243 IFDADGFEVAARRVVGLLADLAKEHGPELLEQMNVVDLGGGFGIAYTEKDNPPPPSQMIT 302

Query: 221 FSEKYSVQIYL-----------EPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDS 263
              +   +              EPG AI    T     V  I +        +  V VD 
Sbjct: 303 QIREIVRKECAYAELPVPRIAGEPGRAIAGPGTFTLYEVGTIKDVALGDETARRYVSVDG 362

Query: 264 SVEAHVPDYLLYQESATIY------------PNTGPYTAMVCGRSCLAGDIFGEFHFEKP 311
            +  ++   L                         P  + V G+ C +GDI     +   
Sbjct: 363 GMSDNIRTALYDAVYDCRVVSRSASDTADGDDPATPTLSRVVGKHCESGDIVVRDCWLPD 422

Query: 312 -VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            +  GD ++      Y     + +N +  P +           +R  + +D   
Sbjct: 423 TLAPGDLLAVAATGAYCYAMASGYNRLPRPAVVAVRNGSARLLLRRETTDDMLR 476


>gi|256372577|ref|YP_003110401.1| diaminopimelate decarboxylase [Acidimicrobium ferrooxidans DSM
           10331]
 gi|256009161|gb|ACU54728.1| diaminopimelate decarboxylase [Acidimicrobium ferrooxidans DSM
           10331]
          Length = 426

 Score =  200 bits (508), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 55/387 (14%), Positives = 118/387 (30%), Gaps = 30/387 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D+ ++   +D          +++  A K F+A  M   +        ++S  E
Sbjct: 40  GTPLFVYDEDEVRARIDELRSGLGA--LQVTYASKAFSAVAMARIVADTGLWWDAASAGE 97

Query: 63  VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +          E    +   K  D  + A       I+ +   +L +         +++ 
Sbjct: 98  LEAARRGGVPAERIVLHGNNKGVDELLLADEVGVGRIVVDAHEELERIARL-GLGRRRLW 156

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFHNNCENKS 171
           LR+ P +           +  S+ G +  D           +    V G+  H   +   
Sbjct: 157 LRVVPGIEAHTHAFVRTGQVDSKFGLQLDDGSAERALTWARAHGLTVVGIHAHIGSQIFD 216

Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD-------YPVKDFCQRLKEFSEK 224
              F  +   +      +   ++ +SLGGGI                          +  
Sbjct: 217 LDPFGELAGRMGAVREAWG--VDEVSLGGGIGVPYVRDERAPTLEEWGRSIAEATTLAGM 274

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLYQESATIY 282
              + ++EPG A+V         V  +         V     +  +    L       + 
Sbjct: 275 DPERTFVEPGRALVAPAAITLYRVGVVKRIPGVRTYVAVDGGMSDNPRPVLYGSGYEAVA 334

Query: 283 --PNTGPYT--AMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGI 337
                 P+T    V G+ C +GD+          +  G+ I       Y  +  + +N +
Sbjct: 335 AGRLEAPHTTAMRVVGKHCESGDVLVANALLPEDLAAGELIVTPVTGAYGYSMGSNYNRL 394

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
             P++ +       + +R    +D + 
Sbjct: 395 PRPSVVMVRDGVAREIVRREQLDDLFR 421


>gi|317497192|ref|ZP_07955517.1| diaminopimelate decarboxylase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316895518|gb|EFV17675.1| diaminopimelate decarboxylase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 416

 Score =  199 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 64/391 (16%), Positives = 112/391 (28%), Gaps = 30/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   GT  SSL 
Sbjct: 20  PTPFHLYDEKGIRETARGLYKAFSWNKGFKEYFAVKATPNPTILKILKEEGCGTDCSSLT 79

Query: 62  EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+M+     F G    ++       E         TI  + ++ +   K+ A    K   
Sbjct: 80  ELMMSDRCGFDGSEIMFSSNDTPAEEFILAKQLGATINLDDITHIEFLKECAGIPEKISC 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVNGLMFH------NNCEN 169
                 V      + D     ++ G   +   E+  +     V     H           
Sbjct: 140 RYNPGGVFALGTDIMDNPG-DAKYGMTTEQIFEAFKQLKELGVKEFGIHSFLASNTVTNE 198

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                   + +   K        I +I+L GG+          +    + E   K   + 
Sbjct: 199 YYPTLAKQLFELAVKLKEEVGVHIGFINLSGGVGIPYLPDQEGNDIAVIGEGVHKVYDEV 258

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     I+ E G  ++     L T  +      K  + VD+     +   +     
Sbjct: 259 LVPAGMGDVKIFTELGRYMLAPNGHLVTKAIHEKHTHKEYIGVDACAVNLMRPAMYGAYH 318

Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                            + G  C   D F        + IGD +   D   +       +
Sbjct: 319 HITVMGKENEPADHVYDITGSLCENNDKFAIDRKLPKIDIGDLLVIHDTGAHGFAMGYNY 378

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   DGT + IR   +  DY+ 
Sbjct: 379 NGKLKSAEILLKEDGTTEMIRRAETPEDYFA 409


>gi|227542589|ref|ZP_03972638.1| diaminopimelate decarboxylase [Corynebacterium glucuronolyticum
           ATCC 51866]
 gi|227181787|gb|EEI62759.1| diaminopimelate decarboxylase [Corynebacterium glucuronolyticum
           ATCC 51866]
          Length = 463

 Score =  199 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 60/403 (14%), Positives = 116/403 (28%), Gaps = 42/403 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +++D+    +               +  A K F    +   +N        +SL E
Sbjct: 61  GTPLFVVDEDDFRSRCQAMAAAFGAEN--VHYAAKAFLTKAIARWVNDEGLHLDVASLGE 118

Query: 63  VMLGHE-KFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + +     F  E    +   K        V S   T++ +   ++    D+A        
Sbjct: 119 LQVALATGFPAERITAHGNNKTVAYMDKIVSSGVGTVVLDAPGEIGLLNDRAALAGVTQN 178

Query: 120 LRIN--PSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
           + +   P +      +        + G           C+  +++   ++ GL  H   +
Sbjct: 179 VMVRVKPGIEAHTHEMIATAHEDQKFGFSLASGSAYVACEKALDAVHLDLVGLHCHVGSQ 238

Query: 169 NKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDF--------CQ 216
                 FS   + +   F          +  + LGGG       +               
Sbjct: 239 VFDAEGFSQAAERVLTLFVKLHDERRVTLTTLDLGGGFGIAYTAHSRPLCVEDVAEDLIA 298

Query: 217 RLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS------VEA 267
           R++   EK +    +I +EPG +I   TT     V  + +                 +  
Sbjct: 299 RVQRRCEKLNLDVPRIMVEPGRSIAGPTTVTVYEVGQVKDVHVTDTQTRRYVAVDGGMSD 358

Query: 268 HVPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFED 322
           ++   L   E      N      P    V G  C +GDI          V  GD ++   
Sbjct: 359 NLRPALYQAEYDLRLVNRSASGAPIPTRVVGSHCESGDILITNEAYPDDVATGDLVATAA 418

Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              Y     + +N +  P +           ++  +  D   N
Sbjct: 419 TGAYCYAMSSRYNMMLRPAVVSVKDGKARLMVKRETIEDVLEN 461


>gi|291543687|emb|CBL16796.1| Diaminopimelate decarboxylase [Ruminococcus sp. 18P13]
          Length = 419

 Score =  199 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 57/391 (14%), Positives = 113/391 (28%), Gaps = 30/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+YL D++ +  N          N G +   A+K      +   L +   G   SSL 
Sbjct: 19  PTPFYLYDEKGIRENARKLKQAFAWNKGYREYFAVKATPNPFILKILQEEGCGVDCSSLT 78

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+M+     F G    ++       +          I  + ++ ++  +  A        
Sbjct: 79  ELMMSEACGFSGSDIMFSSNVTPAEDFKLAKKLGAYINLDDITHIDFLEQVAGLPETIFC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVNGLMFH------NNCEN 169
                     +  + D     ++ G   +  I+       K V     H           
Sbjct: 139 RYNPGGHFEIETHVMDNPG-EAKYGFTTQQLIDGFKILMQKGVKHFGLHAFLASNTVTNA 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC-----------QRL 218
                   + +            I +++L GG+    +     +             + +
Sbjct: 198 YYPKLARVLFETAVMLKKETGADIRFVNLSGGVGIPYRPEQEPNDILAIGEGVRQAFEEI 257

Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
              +    V I+ E G  ++     L T  +      K  + VD+     +   +     
Sbjct: 258 MVPAGLGDVAIFTELGRFMLGPYGNLITKAVHEKHIYKEYIGVDACAANLMRPAIYGAYH 317

Query: 279 ATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        + +GD ++  D   +  +    +
Sbjct: 318 HITVLGKENAPCDHKYDVTGGLCENNDKFAVDRMLPKIDMGDYLAIHDAGAHGFSMGYNY 377

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   DG+ K IR   +  DY+ 
Sbjct: 378 NGKLRSAEILLCEDGSFKLIRRAETPADYFA 408


>gi|269216542|ref|ZP_06160396.1| diaminopimelate decarboxylase [Slackia exigua ATCC 700122]
 gi|269130071|gb|EEZ61153.1| diaminopimelate decarboxylase [Slackia exigua ATCC 700122]
          Length = 475

 Score =  199 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 61/393 (15%), Positives = 123/393 (31%), Gaps = 29/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D+  +  N+++ +     N G +   A+K      + + L +Y  G   SS  
Sbjct: 71  PTPFHLYDEAGIRRNIESLVRAFSWNPGFREYFAVKATPNPFIIEILQEYGCGCDCSSYA 130

Query: 62  EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E++L       G    ++     + +         TI  + ++ ++  +    ++ K I 
Sbjct: 131 ELVLADACGAHGSDIMFSSNETPEEDFRLASQLGATINLDDITHIDVLESVIGRIPKTIS 190

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKI------ESEIKNVNGLMFHNNCEN---- 169
            R NP  ++        N   ++ G      I      +++     G+            
Sbjct: 191 CRYNPGGTFEVANGIMDNPGDAKYGMTDDQFIEAFRILKAKGAKEFGIHAFLASNTVTNE 250

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
                   +     +        I +I+L GGI          +  + + E   +    I
Sbjct: 251 YYPKLAGILFDVAVRVAREADVHIGFINLSGGIGIPYTPDQEPNDIEAIGEGVRRKFEDI 310

Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                      + E G  +      L T  +      K+ + VD+     +   +     
Sbjct: 311 LVPAGMGDVALFTELGRFVTGPYGCLITRAIREKHTYKDYIGVDACAANLMRPAIYGAYH 370

Query: 279 ATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +T  + G  C   D F        +  GD +   D   +       +
Sbjct: 371 HITVLGKEAAERDHTYDIVGGLCENNDKFAVDRALPRIDRGDLLVIHDAGAHGHAMGYNY 430

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       +   DG++K IR   +  DY+  L
Sbjct: 431 NGRLRSAELLLRPDGSVKLIRRAETTQDYFATL 463


>gi|172063790|ref|YP_001811441.1| diaminopimelate decarboxylase [Burkholderia ambifaria MC40-6]
 gi|171996307|gb|ACB67225.1| diaminopimelate decarboxylase [Burkholderia ambifaria MC40-6]
          Length = 417

 Score =  199 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 59/405 (14%), Positives = 120/405 (29%), Gaps = 51/405 (12%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   + + +             +  A K  +   +   +        + SL E
Sbjct: 16  GTPLWVYDADVIRDRIAQLRQFDV-----IRYAQKANSNLHILKLMRDERVCVDAVSLGE 70

Query: 63  VMLGHEKF----------GGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKA 111
           +                   E   +     D    A +  +  T+   ++  L +  + A
Sbjct: 71  IERSLAAGFSPAGGPASGDPEGVVFTADLIDRPTLAAVLKHGVTVNAGSLDMLARVGEHA 130

Query: 112 QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHN 165
                ++ LR+NP   +      +   P S+ G    D       +      + G+  H 
Sbjct: 131 --PGHRVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVRQYGLKLVGIHMHI 188

Query: 166 NCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQ 216
                 +   S +   +          IE IS GGG+               Y  +    
Sbjct: 189 GSGVD-YGHLSQVCDAMVDLVTSLGHDIEAISAGGGLSIPYRDGEPRVDVGHYFSQWDAA 247

Query: 217 RLKEFSE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLL 274
           R +      ++V+I +EPG  +V    TL T V  ++   K+  + +D+     +   + 
Sbjct: 248 RKRIERHLGHAVRIEIEPGRFLVAEAGTLVTEVQAVNHRPKHDFVLIDAGFNDLMRPSMY 307

Query: 275 YQESATIYPNTGP--------YTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRIS 319
               A                    + G  C +GD+F +              +IGD + 
Sbjct: 308 GSYHAVSVHAPDGALPAGRPLVDIAIAGPLCESGDVFTQDAGGVVTHRKLAQPQIGDLLF 367

Query: 320 FEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             D   Y  +  + +N   +    + +        R  +  +   
Sbjct: 368 LHDAGAYGASMSSNYNSRPLAPEVLVDRGTPRLIRRRQTIGELLA 412


>gi|329729353|gb|EGG65759.1| diaminopimelate decarboxylase [Staphylococcus epidermidis VCU144]
          Length = 421

 Score =  199 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 55/394 (13%), Positives = 119/394 (30%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D+ ++ N +       + +G    +  A K F    M   +++        S 
Sbjct: 26  GTPSIVYDEDQIRNQIRRYHKAFEASGLSYNISYASKAFTCIQMVKLIDEENLQLDVVSE 85

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    E  F  +   ++   K          +     + +T+ ++      A   +  
Sbjct: 86  GELYTALEAGFDSKRIHFHGNNKTKREIQYALDNQIGYFVVDTLEEIELIDKYADS-NVD 144

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168
           + LR+NP V           +  S+ G   K             ++   + G+ FH   +
Sbjct: 145 VVLRVNPGVEAHTHEFIQTGQEDSKFGLSIKHGLALNAVNKVKATKHLQLKGIHFHIGSQ 204

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ-----------R 217
            +         K +         ++  +++GGG      +       +            
Sbjct: 205 IEGTEAMIKTAKIVLNWLASERIEVSLLNIGGGFGIKYVEGDESFPIEQGISEITEAIKE 264

Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLY 275
             +  +    +I +EPG +IV         V  I +       V     +  H+   L  
Sbjct: 265 TAQALQYNIPEIGIEPGRSIVGEAGITLYEVGTIKDIPGVNKYVSVDGGMSDHIRTALYG 324

Query: 276 QESATI---YPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFEDVAGYNINRK 331
            +   +          +  + G+ C +GDI          V  GD ++      Y+ +  
Sbjct: 325 AQYEALLVNRNEKANESVTIAGKLCESGDIIVRDARLPSSVHRGDYLAVLSTGAYHYSMA 384

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + +N +    +         + I+  S      N
Sbjct: 385 SNYNQMQKSPVFFLKDGKAREVIKRQSLRQLIIN 418


>gi|254373451|ref|ZP_04988939.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151571177|gb|EDN36831.1| diaminopimelate decarboxylase [Francisella novicida GA99-3549]
          Length = 394

 Score =  199 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 64/372 (17%), Positives = 119/372 (31%), Gaps = 30/372 (8%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           TP Y+ D + L +    A           ++  A+K      + D   +Y  G    S  
Sbjct: 23  TPCYIYDLELLEDTFLNAKKSLDKNFKNAEIHYAIKANHNPKIVDIAKKYGMGIDCVSGG 82

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK--FKDKAQKLHK-- 116
           E+    E K   +   +    K      +  + D   FN+ S          AQ+ +K  
Sbjct: 83  EIKRALEQKVDSQHIVFAGVGKADWEIELAIDNDIFAFNSESLEEIQVINQIAQRKNKKV 142

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE--------IKNVNGLMFHNNCE 168
            I LR+NP++           +   + G    D +             N+ GL +H   +
Sbjct: 143 NICLRVNPNIDAQTHHYISTGQFDDKFGIAFVDILNWLKDEYRNFANINIIGLHYHVGSQ 202

Query: 169 NKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLK 219
             ++  F           K        I+ I+ GGG+                 +  R +
Sbjct: 203 ILNYQVFQSLAITTNEHIKLLRQNDINIKHINFGGGLGIDYQNPQQNPIVDFDGYFARFR 262

Query: 220 EFSEKYSV-QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQE 277
           EF E      ++ E G ++V  +  L + VL        + VI+D+ +   +   L   +
Sbjct: 263 EFFEYCDELTLHFELGRSLVGQSGVLVSQVLFNKVTQGTHFVIIDAGMTELIRPALYQAQ 322

Query: 278 S----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                             + G  C + D+F +++    +K GD ++      Y     + 
Sbjct: 323 HKIAALIDENINQKQHYHIVGPICESSDVFAKYYQLPKLKRGDLLAIYSAGAYGKVLASE 382

Query: 334 FNGINMPTIAVK 345
           +N          
Sbjct: 383 YNLRPSVQEYFI 394


>gi|218437837|ref|YP_002376166.1| diaminopimelate decarboxylase [Cyanothece sp. PCC 7424]
 gi|218170565|gb|ACK69298.1| diaminopimelate decarboxylase [Cyanothece sp. PCC 7424]
          Length = 477

 Score =  199 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 50/404 (12%), Positives = 113/404 (27%), Gaps = 42/404 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAG-VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P Y++D+  L                G  +++ A K ++   +   +     G    S
Sbjct: 60  GSPLYILDEYTLRTACKQYREAFIKYYPGQSQVIYASKAWSCMAVCAVIASEGLGFDVVS 119

Query: 60  LYEV--------MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDK 110
             E+         +G          ++   K         +    I+ +   +L      
Sbjct: 120 GGELYTTLQTLEQMGLGDDIATKIYFHGNNKSVTELQFALSVGCTIMVDNWLELETLVKL 179

Query: 111 ---AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNG 160
                +   +I LR+ P +              ++ G              E  I N  G
Sbjct: 180 GANLGEKSVRIMLRLTPGIECHTHEYIRTGHLDNKFGFDPHQLEAVLTYVSEHSIFNCIG 239

Query: 161 LMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQR 217
           +  H   +         +   +             I+ +++GGG+     +       + 
Sbjct: 240 IHAHIGSQIFETQPHHDLAGVLVGYLKSAIAKGLPIQELNVGGGLGIRYTEKDDPPAIEE 299

Query: 218 LKEFSEK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS-- 264
             +                  ++  EPG +++ +      TV    E  +    +     
Sbjct: 300 WVKNVATAIVKACEAEQIPLPKLIAEPGRSLIGSACITAYTVGSRKEIPELRTYIAVDGG 359

Query: 265 VEAHVPDYLL---YQES-ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
           +  +         Y+   A         T  + G+ C +GDI  +       + GD +  
Sbjct: 360 MSDNPRPITYQSLYRAIIANRMSTPQSETVTIAGKHCESGDILIKDALLPKAEPGDILVV 419

Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
                YN +  + +N +  P   + +       ++  +Y D   
Sbjct: 420 MGTGAYNYSMASNYNRLPRPAAVLVHQGEANLILKRETYEDLLR 463


>gi|296127489|ref|YP_003634741.1| diaminopimelate decarboxylase [Brachyspira murdochii DSM 12563]
 gi|296019305|gb|ADG72542.1| diaminopimelate decarboxylase [Brachyspira murdochii DSM 12563]
          Length = 412

 Score =  199 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 56/387 (14%), Positives = 125/387 (32%), Gaps = 23/387 (5%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           +  +P+YL  K  +L  +     I  +   V +  A+K      +   + +   G    S
Sbjct: 22  VYGSPFYLYSKNDILQKIRFLKDIFSSLDDVLIAYAVKAENNLSILKMMVEEGIGADVVS 81

Query: 60  LYE-VMLGHEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
           + E +             ++     ++    ++  N       ++ +  +  + A++L K
Sbjct: 82  IGESLKYIKAGGDARNIVFSGVAKTEEEIKKSIELNIKRFNIESIPEAVRINNIAKELKK 141

Query: 117 K--IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNC 167
           +    +R+NP+V              ++ G   K  IE+       +   +  L  H   
Sbjct: 142 RVKCSIRVNPNVDAHTHEKITTGVNGNKFGVCIKTIIENSNLLKSLDNIEIESLSMHIGS 201

Query: 168 ENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKD----YPVKDFCQRLKE 220
           +      F   +  +             I  I +GGG           +    F      
Sbjct: 202 QMTDAEPFYRAILVMRDLINEVNSMGFNITDIDIGGGYGVRYNKDHSGFDFDKFKNESIN 261

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL--YQE 277
             ++ ++++  EPG   V  +  L   V  + E +    ++ D  +  +V   +   Y E
Sbjct: 262 LLKEMNLKVTTEPGRYFVAESGALIMRVEYVKEELGRKYVILDGGMNDYVRVAMYDAYNE 321

Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
              +            G  C + D F        V+ GD ++  D   Y  +  + +N  
Sbjct: 322 IYPLVKRESVSNYDFVGPICESSDFFAYDRECSVVEEGDYVALLDAGAYGFSMSSNYNSR 381

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
            +    + + D      +  ++N+   
Sbjct: 382 PLIAQVMADKDKHYIIRKRQTFNEMIE 408


>gi|68171181|ref|ZP_00544588.1| Diaminopimelate decarboxylase [Ehrlichia chaffeensis str. Sapulpa]
 gi|88658344|ref|YP_507301.1| diaminopimelate decarboxylase [Ehrlichia chaffeensis str. Arkansas]
 gi|67999412|gb|EAM86054.1| Diaminopimelate decarboxylase [Ehrlichia chaffeensis str. Sapulpa]
 gi|88599801|gb|ABD45270.1| diaminopimelate decarboxylase [Ehrlichia chaffeensis str. Arkansas]
          Length = 420

 Score =  199 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 68/385 (17%), Positives = 123/385 (31%), Gaps = 23/385 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y      + NN         N    +  A+K  +   +   LN    G    S  
Sbjct: 30  VGTPVYCYSLNAIKNNYRQFQENLPN-NSIVCYAVKSNSNLSILSLLNSLGAGADVVSEG 88

Query: 62  EVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116
           E+              ++   K  +      +         ++ +L+     A + +   
Sbjct: 89  EIRRAIAAGISPNKIVFSGVGKTEQEINFALDNRILQFNVESIEELSLINTIACQKNIIA 148

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK---CKDKIESEIKNVN--GLMFHNNCEN-- 169
            + +RINP+++             ++ G            +   +   G+  H   +   
Sbjct: 149 PVSIRINPNINADTNDKITTGLKVNKFGIPEELLDQIFNKDFTWIKIIGISVHIGSQISN 208

Query: 170 -KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD----FCQRLKEFSEK 224
              F      +K I K F    TQI  + LGGG+    K          +   LK+  E 
Sbjct: 209 LHIFQNTIDKIKKIIKIFKQHNTQIIRVDLGGGLGIPYKSSDTFPTIQEYANLLKKNFEN 268

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP 283
            + QI  EPG A+V NT  L T VL    N +   I+ D+ +   +   L   E   I  
Sbjct: 269 ENYQIICEPGRALVGNTGILLTKVLYRKYNQEKSHIILDAGMNDLIRPALYNAEHTIIPA 328

Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            +          + G  C + D F   +    ++ G+ ++      Y  +  + +N   +
Sbjct: 329 ISSTSTQLQPCDIVGPICESDDTFAHNYHIHNLQNGEIVAICTAGAYGSSMSSNYNSRLL 388

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
               + N           +Y D   
Sbjct: 389 IPEVMVNNSSYDIIRSRQTYEDMLK 413


>gi|312868226|ref|ZP_07728426.1| putative diaminopimelate decarboxylase [Streptococcus parasanguinis
           F0405]
 gi|311095971|gb|EFQ54215.1| putative diaminopimelate decarboxylase [Streptococcus parasanguinis
           F0405]
          Length = 416

 Score =  199 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 60/392 (15%), Positives = 114/392 (29%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D+  +             N G K   A+K      +   L +   G  ++S  
Sbjct: 19  PTPFHLYDEAGIRETARALHQAFAWNEGFKEYFAIKATPNPSILKILQEEGCGVDTASYV 78

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++  +  F G+   ++       E         TI  +    +   K           
Sbjct: 79  ELLMADKLGFSGKEIMFSSNNTPADEFVYARELGATINLDAYEDIAFLKSVTGIPKVISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES----EIKNVNGLMFH------NNCEN 169
                 V      + D     ++ G   +  I++    +   V     H          +
Sbjct: 139 RYNPGGVFELGTDIMDNP-EEAKFGMTKEQLIQAFIELKELGVEEFGIHALLASNTVSND 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY---- 225
                   + +   +        + +I+L GG+    K     +    + E   +     
Sbjct: 198 YYPELARQLFELAVEVVEKTGVHLGFINLSGGVGVNYKPEQEPNDIAIIGEGVHRVFDEI 257

Query: 226 -------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                   V+IY E G  ++ +   L T V    +  +  V VD+S    +   +     
Sbjct: 258 LKPAGLGHVKIYTELGRFMLASHGLLVTRVTHKKKTYRTYVGVDASAVNLLRPAMYGAYH 317

Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                +          V G  C   D F +       +IGD +   D   +  +    +N
Sbjct: 318 HITNMDRPEGPTEVVDVVGSLCENNDKFAKQRELPVTEIGDLLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                   +   DG  + IR      DY   L
Sbjct: 378 AKLRSAEVLLQEDGQARLIRRAEKPEDYLATL 409


>gi|296875968|ref|ZP_06900027.1| diaminopimelate decarboxylase [Streptococcus parasanguinis ATCC
           15912]
 gi|322390075|ref|ZP_08063610.1| diaminopimelate decarboxylase [Streptococcus parasanguinis ATCC
           903]
 gi|296433043|gb|EFH18831.1| diaminopimelate decarboxylase [Streptococcus parasanguinis ATCC
           15912]
 gi|321143202|gb|EFX38645.1| diaminopimelate decarboxylase [Streptococcus parasanguinis ATCC
           903]
          Length = 416

 Score =  199 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 60/392 (15%), Positives = 114/392 (29%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D+  +             N G K   A+K      +   L +   G  ++S  
Sbjct: 19  PTPFHLYDEAGIRETARALHQAFAWNEGFKEYFAIKATPNPSILKILQEEGCGVDTASYV 78

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++  +  F G+   ++       E         TI  +    +   K           
Sbjct: 79  ELLMADKLGFSGKEIMFSSNNTPADEFVYARELGATINLDAYEDIAFLKSVTSIPKVISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES----EIKNVNGLMFH------NNCEN 169
                 V      + D     ++ G   +  I++    +   V     H          +
Sbjct: 139 RYNPGGVFELGTDIMDNP-EEAKFGMTKEQLIQAFIELKELGVEEFGIHALLASNTVSND 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY---- 225
                   + +   +        + +I+L GG+    K     +    + E   +     
Sbjct: 198 YYPELARQLFELAVEVVEKTGVHLGFINLSGGVGVNYKPEQEPNDIAIIGEGVHRVFDEI 257

Query: 226 -------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                   V+IY E G  ++ +   L T V    +  +  V VD+S    +   +     
Sbjct: 258 LKPAGLGHVKIYTELGRFMLASHGLLVTRVTHKKKTYRTYVGVDASAVNLLRPAMYGAYH 317

Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                +          V G  C   D F +       +IGD +   D   +  +    +N
Sbjct: 318 HITNMDRPDGPTEVVDVVGSLCENNDKFAKQRELPVTEIGDLLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                   +   DG  + IR      DY   L
Sbjct: 378 AKLRSAEVLLQEDGQARLIRRAEKPEDYLATL 409


>gi|29726282|pdb|1HKW|A Chain A, Mycobacterium Diaminopimelate Dicarboxylase (Lysa)
 gi|29726283|pdb|1HKW|B Chain B, Mycobacterium Diaminopimelate Dicarboxylase (Lysa)
          Length = 453

 Score =  199 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 53/406 (13%), Positives = 119/406 (29%), Gaps = 45/406 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ID+    +           +G  +  A K F    +   +++        +  E
Sbjct: 39  GTPLFVIDEDDFRSRCRETAAAF-GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGE 97

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F  E    +   K       AV +    I+ ++ +++ +    A +    + 
Sbjct: 98  LAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSXTEIERLDAIAGEAGIVQD 157

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVNGLMFHNNCE 168
           + +R+   V               + G                  +   + GL  H   +
Sbjct: 158 VLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAXAAVRRVFATDHLRLVGLHSHIGSQ 217

Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F          +    G F  +    I  + LGGG+  +            L  
Sbjct: 218 IFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAA 277

Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS----- 264
                           + ++ +EPG AI    T     V  + +   +            
Sbjct: 278 KLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDG 337

Query: 265 -VEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318
               ++   L   +      +   +  P  A + G+ C +GDI     +    ++ GD +
Sbjct: 338 GXSDNIRTALYGAQYDVRLVSRVSDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLV 397

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +      Y  +  + +N +  P +   +       +R  + +D  +
Sbjct: 398 AVAATGAYCYSLSSRYNXVGRPAVVAVHAGNARLVLRRETVDDLLS 443


>gi|332883591|gb|EGK03872.1| diaminopimelate decarboxylase [Dysgonomonas mossii DSM 22836]
          Length = 385

 Score =  199 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 67/371 (18%), Positives = 120/371 (32%), Gaps = 25/371 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TP+Y  D   L   L       K  G     A+K  A   + + +     G    S  
Sbjct: 14  IETPFYYYDTDLLKRTLKIVKEETKKYGFIQHYAIKANANRRILELIASEGFGADCVSGN 73

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116
           EV       F      +    K  +    A+  N       ++ +L    + A  +    
Sbjct: 74  EVKAAITAGFPASKIVFAGVGKTDKEINLALDLNIFCFNVESMPELVVLNELAAKKGKTA 133

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCEN 169
           ++ LRINP+V              ++ G        +       +   + G+ FH   + 
Sbjct: 134 QVALRINPNVDAHTHEYITTGLNENKFGFSMAHLDNAIEVLKSLKNLKLIGIHFHIGSQI 193

Query: 170 ---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226
               +F      +  ++  F     ++E I++GGG     +D          + F   + 
Sbjct: 194 EDVHTFDPLCDRINELQDLFEAKGMKLENINVGGGFGIDYEDPDANPISDFQRYFELFHK 253

Query: 227 -------VQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES 278
                    ++ E G AIV    +L T V  +     K  VIVD+ +   +   L     
Sbjct: 254 GLKLRDGQVVHFELGRAIVAQCGSLVTKVTYVKHGESKTFVIVDAGMTDLIRPALYQAYH 313

Query: 279 --ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
               I  +       V G  C + D+F + +     K GD +       Y     + +N 
Sbjct: 314 KVENISSDLPIQKYDVVGPICESSDVFVKDYELNESKRGDLLVLRSAGAYGEIMASQYNC 373

Query: 337 INMPTIAVKNV 347
            ++P     + 
Sbjct: 374 RDIPKSYFSDK 384


>gi|281491804|ref|YP_003353784.1| diaminopimelate decarboxylase [Lactococcus lactis subsp. lactis
           KF147]
 gi|281375518|gb|ADA65028.1| Diaminopimelate decarboxylase [Lactococcus lactis subsp. lactis
           KF147]
          Length = 419

 Score =  199 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 66/394 (16%), Positives = 123/394 (31%), Gaps = 30/394 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L++   G   +S  
Sbjct: 19  PTPFHLYDEKGIRQKARDLHKAFAWNKGFKEFFAVKATPTPAILKILHEEGCGVDCASYV 78

Query: 62  EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK-I 118
           E++L     F G    ++       E         TI  +    +   K+    +  + +
Sbjct: 79  ELLLSEKCGFDGSEMMFSSNDTPAEEFQFANQLGATINLDAYEDIEFLKNLTDFIFPETM 138

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVN--GLMFHNNCEN--- 169
            LR NP   ++       N   S+ G      I+     +   V   G+           
Sbjct: 139 SLRYNPGGVFAMGTKIMDNPEESKFGMTKAQLIQGIKDLQKLGVKKFGMHSFLASNTVTN 198

Query: 170 -KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
                  S + K   +        +++I+L GGI    +     +   ++ +   +   +
Sbjct: 199 DYYPELASKLFKLALEIREETGITLDFINLSGGIGVNYRPDEEANDIAKIGQGVHEAYDE 258

Query: 229 -----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
                      IY E G  ++     L T VL + E  +  V VD+S    +        
Sbjct: 259 VLSANGIENLKIYTELGRFMLAPHGHLITKVLHLKETYRKYVGVDASAVNLMRPAFYDAY 318

Query: 278 SATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                             + G  C   D F +      ++IGD +   D   +  +    
Sbjct: 319 HHITVAGKENGEATEIYDITGSLCENNDKFAKERAFPKIEIGDLLVIHDTGAHGFSMGYQ 378

Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           +N     +  +   DG  + IR      DY+  L
Sbjct: 379 YNAKLRSSEVLLQEDGKTRLIRRAEKPADYFATL 412


>gi|218133732|ref|ZP_03462536.1| hypothetical protein BACPEC_01601 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991107|gb|EEC57113.1| hypothetical protein BACPEC_01601 [Bacteroides pectinophilus ATCC
           43243]
          Length = 430

 Score =  199 bits (507), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 63/391 (16%), Positives = 126/391 (32%), Gaps = 29/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +  N          N G +   A+K      + + L  Y  G   SSL 
Sbjct: 28  PTPFHLYDEKGIRENASKLKEAFAWNKGYREYFAVKATPNPFILNILKDYDCGCDCSSLT 87

Query: 62  EVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+M+     F G++  ++      E  A        I  + ++ ++  +    ++ + I 
Sbjct: 88  ELMMADRLDFDGKSIMFSSNDTPAEEFAYADKVGAIINLDDITHIDFLEKTIGRIPETIS 147

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169
            R NP   +        N   S+ G   +  IE+         +   ++  L  +     
Sbjct: 148 CRYNPGGYFKLGNSIMDNPGDSKYGMTHEQIIEAFKILKSKGAKNFGIHAFLASNTVTNE 207

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                   + +   +        I++I+L GGI          +    +     K   + 
Sbjct: 208 YYPALARILFELAVELHEKTGADIKFINLSGGIGIPYTPDKEPNDISVIGANVHKVYDEV 267

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     IY E G  ++     L T  +      K  + VD+     +   +     
Sbjct: 268 LTANGMGDVAIYTELGRFMLAPYGCLVTKAIHEKHTYKEYIGVDACAANLMRPAMYGAYH 327

Query: 279 ATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   + G  C   D F        + +GD +   D   +  +    +
Sbjct: 328 HITVAGKENAPCDHKYDITGSLCENNDKFAIDRMLPKIDMGDYLIIHDTGAHGFSMGYNY 387

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG    +  +   DG+++ IR   +  DY+ 
Sbjct: 388 NGRLRSSELLLKEDGSVQMIRRAETPKDYFA 418


>gi|325265039|ref|ZP_08131766.1| protein TabA [Clostridium sp. D5]
 gi|324029729|gb|EGB91017.1| protein TabA [Clostridium sp. D5]
          Length = 428

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 63/391 (16%), Positives = 120/391 (30%), Gaps = 29/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +  N+         N G K   A+K      + D L +Y  G   SS  
Sbjct: 20  PTPFHLYDEKGIRENVKALKEAFSWNPGYKEYFAVKATPNPFLIDILKEYGCGCDCSSYT 79

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+ML       GE   ++       E          I  + ++ ++  +     + + I 
Sbjct: 80  ELMLSDAVGIRGEDIMFSSNDTPAEEFILADKLGAIINLDDITHIDFLEQTIGHIPEVIS 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCEN---- 169
            R NP   +        N   S+ G            ++ +     G+            
Sbjct: 140 CRYNPGGLFKISNDIMDNPGDSKYGMTTPQMYEAFKILKEKGAKEFGIHAFLASNTVTNE 199

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
              +    + +            I +I+L GGI    +     +  + + +   +   + 
Sbjct: 200 YYPMLAKVLFEQAVSLQKETGVHISFINLSGGIGIPYRPGQEPNDIRIIGDGVRRVYEEV 259

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     IY E G  ++     L T  +      K  + VD+     +   +     
Sbjct: 260 LVPAGMGDVAIYTELGRYMMGPYGCLVTKAIHEKHTHKEYIGVDACAVNLMRPAMYGAYH 319

Query: 279 ATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        V++GD +   D   +  +    +
Sbjct: 320 HITVMGKEDWPCDHKYDVSGSLCENNDKFAIDRMLPEVEMGDYLVIHDTGAHGFSMGYNY 379

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   DG+ + IR   +  DY+ 
Sbjct: 380 NGKLKSAEVLLKEDGSAQLIRRAETPADYFA 410


>gi|307295072|ref|ZP_07574914.1| diaminopimelate decarboxylase [Sphingobium chlorophenolicum L-1]
 gi|306879546|gb|EFN10764.1| diaminopimelate decarboxylase [Sphingobium chlorophenolicum L-1]
          Length = 421

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 61/387 (15%), Positives = 113/387 (29%), Gaps = 24/387 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           + TP Y+     L  ++          A   +  A+K      +  TL +   G    S 
Sbjct: 25  VGTPVYIYSTATLTRHVGVFREGLSQLADPLIAFAVKANPNAAVLATLGRLGLGADVVSA 84

Query: 61  YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E++             ++   K  D    A+          +  +     + A  +   
Sbjct: 85  GELLRAIAAGIPANRIVFSGVGKTADEMRIALEQGIYQFNLESEPEAEMLSEVALSMGRR 144

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCE 168
             +  RINP V           +  ++ G      + S          +V G+  H   +
Sbjct: 145 APVAYRINPDVDAGTHAKISTGKSENKFGIPYDRALASYAAARDLPGLDVQGVAVHIGSQ 204

Query: 169 NKSFLCFSAML---KNIEKEFGHFITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKE 220
                   A       + ++       I    LGGG+               D+   +  
Sbjct: 205 LTDLKPLEAAFVKVGALIEKLREAGHDIRTADLGGGLGVPYDPSQPLPPSPADYGAMVTR 264

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESA 279
            ++ ++V++  EPG  IV N   L + V+ + +      VIVD+++   +   L      
Sbjct: 265 ITQGWNVRLLFEPGRLIVGNAGVLLSQVVRVKQGAQAPFVIVDAAMNDLLRPSLYDAWHD 324

Query: 280 TIYPNTG--PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                       A V G  C  GD F        V  GD ++F     Y     + +N  
Sbjct: 325 IRAVQPKGDRAAANVVGPVCETGDTFAMHRDMDVVGAGDLVAFMTAGAYGATMASTYNSR 384

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
            +    + + D                
Sbjct: 385 ALTPEVLVSGDKWAVVRARPPIETLIQ 411


>gi|312898393|ref|ZP_07757783.1| putative diaminopimelate decarboxylase [Megasphaera micronuciformis
           F0359]
 gi|310620312|gb|EFQ03882.1| putative diaminopimelate decarboxylase [Megasphaera micronuciformis
           F0359]
          Length = 417

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 66/392 (16%), Positives = 122/392 (31%), Gaps = 28/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+++ D++ +  N+   +     A   K   A+K      +   L     G   SSL 
Sbjct: 21  PTPFHIYDEEAIRANVRKLIKAFDWAKDFKEYFAVKATPNPYIMKILKAEGVGADCSSLP 80

Query: 62  EVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           E++L       G+   ++      +  A       II      +  F +    +  +I +
Sbjct: 81  ELLLCEKVGISGDDIIFSSNDTPYQEFAKAMELGAIINIDDITMIDFLEANGPIPDRICM 140

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIES----EIKNVNGLMFHNNCENKS----- 171
           R NP                S+ G       E+    + K V     H    +       
Sbjct: 141 RYNPGPLLKDGNDIIGTPEESKYGLTRDQIFEAMAILKQKGVKRFGLHTMVVSNELNANG 200

Query: 172 -FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEKYS 226
                  M +   +        I++I  GGGI    +              +K+  EK  
Sbjct: 201 LINTAKMMFELAVEVKERLGIYIDFIDFGGGIGLPYRPEESFVDYDVLSAGIKDQFEKIM 260

Query: 227 -------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA 279
                  +++  E G AI      L TT +   +  K+ +  D+S+   +   +      
Sbjct: 261 VPNGLDDIRLSFECGRAITGPYGYLVTTAIHHKDIWKHYIGTDASMANLMRPGMYGAYHH 320

Query: 280 TIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                       +   V G  C   D F        +K GD +   D   +  +    +N
Sbjct: 321 LTVLGKEEAPADHVYDVTGSLCENCDKFAVDRPLPEIKDGDILVIHDTGAHGHSMGFNYN 380

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           G       + + D ++  IR   + +D +  L
Sbjct: 381 GKLRSAELLMHKDHSVTQIRRAETVDDLFATL 412


>gi|295101800|emb|CBK99345.1| Diaminopimelate decarboxylase [Faecalibacterium prausnitzii L2-6]
          Length = 432

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 60/399 (15%), Positives = 117/399 (29%), Gaps = 35/399 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           + TP+++ D++ +  N          N G +   A+K      +   L +   G   SSL
Sbjct: 19  VPTPFHVYDEKGIRENARRINKAFSWNKGFREYFAVKALPNPVILQILKEEGCGVDCSSL 78

Query: 61  YEVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKA-----QK 113
            E+ML     F G    ++       ++         I  +  + ++     A       
Sbjct: 79  TELMLSEVCGFSGSDIMFSSNQTPVEDMKKAYELGAYINLDDATMVDFLDRVAGVPENIF 138

Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE---------IKNVN-GLMF 163
                G       S   F + D     ++ G   +  I+S             ++  L  
Sbjct: 139 CRYNPGGTFQLGESKEGFQVMDKPG-DAKYGMTEEQMIDSYKKLAAKGAKNFGIHAFLAS 197

Query: 164 HNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223
           +   +         + +   +        I +I+L GG+    +    ++    + E   
Sbjct: 198 NTISDAYYPELAGILFQLAVRVQKATGVHIAYINLSGGVGIPYRPEQTENDIMAIGEGVR 257

Query: 224 KYSVQI-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY 272
           K   +I           + E G         L  T +      K  + +D+     +   
Sbjct: 258 KKFEEILVPAGMGDVSIFTEMGRFTTGPYGALVATAIHEKHIYKEYIGLDACAANLMRPA 317

Query: 273 LLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
           +                  +   V G  C   D F        + IGD +   D   +  
Sbjct: 318 MYGAYHHITVLGKEDAPHDHKYDVVGGLCENNDKFAIDRMLPKIDIGDIVYIHDTGAHGS 377

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                +NG       +   DG+ + IR   +  DY+  L
Sbjct: 378 AMGYNYNGKLRSAEVLLCEDGSHRLIRRAETPRDYFATL 416


>gi|197303210|ref|ZP_03168252.1| hypothetical protein RUMLAC_01933 [Ruminococcus lactaris ATCC
           29176]
 gi|197297750|gb|EDY32308.1| hypothetical protein RUMLAC_01933 [Ruminococcus lactaris ATCC
           29176]
          Length = 423

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 62/391 (15%), Positives = 122/391 (31%), Gaps = 29/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +  N          N G K   A+K      + D L +Y  G   SS  
Sbjct: 20  PTPFHLYDEKGIRANAKALKEAFSWNPGYKEYFAVKATPNPFLLDILKEYGCGCDCSSYT 79

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+ML       G    ++       +          I  + +S +   +     + + I 
Sbjct: 80  ELMLSEAVGVTGHNIMFSSNDTPAEDFRLADKLGAIINLDDISHIEFLESAIGHIPETIS 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN---- 169
            R NP   +        N   ++ G   +        ++S+     G+            
Sbjct: 140 CRYNPGGLFKISNDIMDNPGDAKYGMTTEQITEAFKILKSKGAKEFGIHAFLASNTVTND 199

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
              +    + +   +        I++I+L GGI    +     +    + E   K   + 
Sbjct: 200 YYPMLAKVLFEQAVRLKNETGANIKFINLSGGIGIPYRPDQEPNDIYAIGEGVRKVYEEV 259

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     I+ E G  ++     L T  +   +  K+ + VD+     +   +     
Sbjct: 260 LVPAGMGDVAIFTELGRYMMGPYGCLVTKAIHEKKTYKDYIGVDACAVNLMRPAMYGAYH 319

Query: 279 ATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        ++ GD +   D   +  +    +
Sbjct: 320 HITVLGKENEPCDHKYDVTGSLCENNDKFAIDRMLPEIERGDYLVIHDAGAHGFSMGYNY 379

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   DG+++ IR   +  DY+ 
Sbjct: 380 NGKLKSAELLLKEDGSVQMIRRAETPKDYFA 410


>gi|283798516|ref|ZP_06347669.1| diaminopimelate decarboxylase [Clostridium sp. M62/1]
 gi|291073776|gb|EFE11140.1| diaminopimelate decarboxylase [Clostridium sp. M62/1]
 gi|295090150|emb|CBK76257.1| Diaminopimelate decarboxylase [Clostridium cf. saccharolyticum K10]
          Length = 451

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 64/391 (16%), Positives = 126/391 (32%), Gaps = 29/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +  N +        N G +   A+K      + D L +   G   SSL 
Sbjct: 49  PTPFHLYDEKGIRENAERLKRAFSWNKGFREYFAVKATPNPFIIDILKKLDCGVDCSSLT 108

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+M+    ++ GE   ++       E     S    I  + ++ +   +     + + I 
Sbjct: 109 ELMMAEAMEYDGEKIMFSSNDTPLEEFQKADSLGAIINLDDITHIEFLEKAIGHIPETIS 168

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN---- 169
            R NP   +        N   ++ G   +        ++S+     G+            
Sbjct: 169 CRYNPGGLFKISNDIMDNPGDAKYGMTTEQIFEAFKILKSKGAKRFGIHAFLASNTVTNE 228

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
              +    + +   K       +I +I+L GGI    +     +    + E   K   + 
Sbjct: 229 YYPMLAKVLFELAVKLKEETGAEIAFINLSGGIGIPYRPDQEPNDIFMIGEGVRKVYEEV 288

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     IY E G  ++     L TT +      K  + VD+     +   +     
Sbjct: 289 LVPAGMGDVAIYTELGRFMLGPYGCLVTTAIHEKHTHKEYIGVDACAVNLMRPAMYGAYH 348

Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   + G  C   D F        + +GD +   D   +  +    +
Sbjct: 349 HITVMGKEKEPCDHKYDITGSLCENNDKFAIDRMLPKIDLGDLLVIHDTGAHGFSMGYNY 408

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   DG+++ IR   +  DY+ 
Sbjct: 409 NGKLRSAELLLREDGSVQMIRRAETPRDYFA 439


>gi|158522146|ref|YP_001530016.1| diaminopimelate decarboxylase [Desulfococcus oleovorans Hxd3]
 gi|158510972|gb|ABW67939.1| Diaminopimelate decarboxylase [Desulfococcus oleovorans Hxd3]
          Length = 418

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 62/391 (15%), Positives = 119/391 (30%), Gaps = 31/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+++ D+  +       L    +  G +   A+K      + D +     G   SS+ 
Sbjct: 23  GTPFHIYDEAGIRGTGKALLDAFSSVPGFREYYAVKALPNPRILDIMRSMGFGFDCSSIP 82

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           E++L       GE   +          A            +  L+      +       +
Sbjct: 83  ELVLARRAGAIGEEIMFTSNNTS----AEEFEAALADSGCILNLDDISLIYKVPKLPDLV 138

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCENKSFL 173
               +    +   A    P         D+I    + V        GL        ++  
Sbjct: 139 CFRYNPGERRTGNAIIGNPVEAKYGVAHDQILEAYRKVRDMGARRFGLHAMLASNERNHT 198

Query: 174 CFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK- 224
                 + +             Q E++++GGG+  +         +     ++ +  E+ 
Sbjct: 199 YMVTTAEMLLDLVRDISDTLDIQFEFVNIGGGLGISYRPGEPPLDLPAMGAQISDVFERF 258

Query: 225 -----YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA 279
                Y  ++Y+E G  +      L T V++     +  V VD+ + A +   +      
Sbjct: 259 GRERRYMPRLYIESGRYMTGPHGALVTRVINRKHIYRTYVGVDACMSALMRPAIYGAYHH 318

Query: 280 TIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
              P        T  V G  C   D F           GD +   D   + I     +NG
Sbjct: 319 ISLPTKSGGPVETVDVVGALCENNDKFAVQRELPVAAEGDLMVIHDTGAHGIAMGFNYNG 378

Query: 337 INMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
              P   +   DG+++ IR   +  DY+  L
Sbjct: 379 RMRPMELLLREDGSVELIRRAETVEDYFATL 409


>gi|78184964|ref|YP_377399.1| diaminopimelate decarboxylase [Synechococcus sp. CC9902]
 gi|78169258|gb|ABB26355.1| diaminopimelate decarboxylase [Synechococcus sp. CC9902]
          Length = 459

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 51/396 (12%), Positives = 107/396 (27%), Gaps = 34/396 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP Y++D+  L +         K         + A K  ++  M   +     G  + S
Sbjct: 52  GTPLYVLDETTLRSTCRAYRDALKRHYPGPSLPIYASKANSSLVMSSLVASEGLGLDAVS 111

Query: 60  LYEVMLG-HEKFGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             E++        G     +     D E+    +N  T++ +    L++           
Sbjct: 112 AGELLTALRGGMPGNRMVLHGNNKSDEELLLAYNNNVTVVVDNQHDLDRLSALIPHDGAP 171

Query: 118 IGLRIN--PSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168
           + L +   P +              S+ G             +      + GL  H   +
Sbjct: 172 VRLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQVEPVLRGLVGQSWAKLTGLHAHIGSQ 231

Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK- 224
                    +   +             +E +++GGG+              R  +   + 
Sbjct: 232 IFELEPHRDLAAVMADALKLARDLGHPVEDLNVGGGLGIRYVKSDDPPSIDRWVQVVAEA 291

Query: 225 ----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDY 272
                        ++  EPG ++V        TV              +D  +  +    
Sbjct: 292 VIAACQARSLDLPRLMCEPGRSLVATAGVTLYTVGSRKTIPGVRTYVAIDGGMSDNPRPI 351

Query: 273 LLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
                      +        T  + G+ C +GD+  +         GD I+      YN 
Sbjct: 352 TYQSLYTCCVADRPLAETDETVNLVGKHCESGDVLLKDLPLPSTTSGDVIAVFATGAYNA 411

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +  + +N I  P   + +        +    +D   
Sbjct: 412 SMSSNYNRIPRPAAVLVHDGAAELVQKREQPDDLLR 447


>gi|84494549|ref|ZP_00993668.1| diaminopimelate decarboxylase [Janibacter sp. HTCC2649]
 gi|84384042|gb|EAP99922.1| diaminopimelate decarboxylase [Janibacter sp. HTCC2649]
          Length = 487

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 57/415 (13%), Positives = 111/415 (26%), Gaps = 53/415 (12%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA------GVKLLLALKCFAAWGMFDTLNQYMDGTT 56
            TP Y++D+        +              G  +  A K F    +   + Q      
Sbjct: 62  GTPAYVVDEGDFRARARSFRDDFAAPFETVCGGADIYYAGKAFLCTAVAKWVAQEGLSLD 121

Query: 57  SSSLYEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQK 113
             S  E+ +     F  E   ++   K       A+      I+ ++  ++ +  + A +
Sbjct: 122 VCSGGELAVARRAGFPAERIGFHGNNKSLAEIRDALDYGVGRIVVDSFIEIERVAEIAAE 181

Query: 114 L--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLM 162
           L     + +R+   V               + G               +  +  ++ GL 
Sbjct: 182 LGVVAPVMIRVTVGVEAHTHEFIATGHEDQKFGFSLSGGQALVAAKAVLAHDTLDLRGLH 241

Query: 163 FHNNCENKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTD--------KDYP 210
            H   +      F    +       +           I LGGG                 
Sbjct: 242 SHIGSQIFDTGGFEMSARRLVGLHAQIANELGHHSPEIDLGGGFGMAYTSQHTPLGPGEL 301

Query: 211 VKDFCQRLKEFSEKY----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI 260
                  +    +              ++ +EPG AIV  +T     V  +         
Sbjct: 302 GAQLADIVGREFKAIGANSDSVAVPFPRVSIEPGRAIVGPSTFTLYEVGTVKPVELGDHH 361

Query: 261 VDSS------VEAHVPDYLLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEK 310
                     +  +V   L   + +    N      P  A V G+ C +GDI  +  +  
Sbjct: 362 SRVYVSVDGGMSDNVRPALYEADYSCTLANRSSDAEPMLARVVGKHCESGDIVVQDEWLP 421

Query: 311 -PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              + GD I+      Y     + +N    P +           +R  + +D   
Sbjct: 422 ADTQPGDLIAVPGTGAYCRALSSQYNHTPRPPVLAVRDGKARVIVRRETIDDLLA 476


>gi|266619241|ref|ZP_06112176.1| diaminopimelate decarboxylase [Clostridium hathewayi DSM 13479]
 gi|288869234|gb|EFD01533.1| diaminopimelate decarboxylase [Clostridium hathewayi DSM 13479]
          Length = 422

 Score =  199 bits (506), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 65/391 (16%), Positives = 123/391 (31%), Gaps = 29/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+++ D++ +  N          N G K   A+K      + + L ++  GT  SS  
Sbjct: 20  PTPFHIYDEKGIRENAKKLKEAFAWNPGYKEYFAVKATPNPFILNILKEFGCGTDCSSET 79

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+M+     F G    ++       E          I  + ++ +   ++   ++ + I 
Sbjct: 80  ELMMADALGFSGSDIMFSSNDTPAEEFRFAHKIGAIINLDDITHIEYLENAIGEIPETIS 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE---------IKNVN-GLMFHNNCEN 169
            R NP   +        N   S+ G   +   E+             ++  L  +     
Sbjct: 140 CRYNPGGVFKISNDIMDNPGDSKYGMTTEQMFEAYQVLKEKGAKHFGIHAFLASNTVTNE 199

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
              L    + +   K        I++I+L GGI    +     +    + E   K   +I
Sbjct: 200 YYPLLAKILFELAVKLKEETGAHIQFINLSGGIGIPYRPDQEPNDIMAIGEGVRKAYEEI 259

Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                      Y E G  ++     L T  +      K  V VD+     +   +     
Sbjct: 260 LVPAGMDDVAIYTELGRYMLGPYGALVTRAIHEKHTHKEYVGVDACAVNLMRPAMYGAYH 319

Query: 279 ATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                    +   +   V G  C   D F        +  GD +   D   +       +
Sbjct: 320 HVTVMGRENDPCDHKYDVVGSLCENNDKFAIDRMLPEIHKGDLLYIHDTGAHGFAMGYNY 379

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   DG+++ IR   +  DY+ 
Sbjct: 380 NGKLKSAELLLKEDGSVEMIRRAETPKDYFA 410


>gi|315924798|ref|ZP_07921015.1| diaminopimelate decarboxylase [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315621697|gb|EFV01661.1| diaminopimelate decarboxylase [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 422

 Score =  199 bits (506), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 58/395 (14%), Positives = 114/395 (28%), Gaps = 35/395 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++ +  + + +          GV   +  A K F    M   +        + S 
Sbjct: 20  GTPLYVMSEDIIRDRIKAIRKAFDLTGVAYDINYAGKAFTNLAMCRIIASEGISLDTVSR 79

Query: 61  YEVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+M      F  E   ++   K  D    AV      I+ ++  +L + +    +   +
Sbjct: 80  GEIMTALKAGFPAERICFHGNNKRVDELRYAVEYGVGHIVVDSEDELARLETIQAETGAE 139

Query: 118 IGLR--INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCE 168
           I +   I+P V      L       S+ G   +       K        V+GL  H   +
Sbjct: 140 IAIMFRISPGVEAHTHELIQTGTEDSKFGIPYQQAKAVVRKASQMRGITVDGLHCHIGSQ 199

Query: 169 NKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYP--------VKDFCQR 217
                 F      +    +        +  ++LGGG                 +      
Sbjct: 200 IVDDKPFVLAADRMLSLYQALVQEGVPLTTLNLGGGFGIPYLTGDESFDTLKYIPQMVDH 259

Query: 218 LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDY 272
           +K++         ++ +EPG  I         TV  +           +D  +  +    
Sbjct: 260 VKQWCRAEGLECPKLVVEPGRFIACEAGVTLYTVGTVKTIPGVRKYVAIDGGMNDNPRPA 319

Query: 273 LLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
           L   +      N           + GR+C   D            +GD +   +   YN 
Sbjct: 320 LYGAQYEAFICNGKAEEQLESCRISGRACE-NDQLIAEMPLNQPTVGDTLMVTNTGAYNY 378

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
              + +N    P + + + D     +   +  +  
Sbjct: 379 TMASVYNRFGRPAVVLLSGDRDAVIVERETDEELL 413


>gi|160897263|ref|YP_001562845.1| diaminopimelate decarboxylase [Delftia acidovorans SPH-1]
 gi|160362847|gb|ABX34460.1| diaminopimelate decarboxylase [Delftia acidovorans SPH-1]
          Length = 431

 Score =  199 bits (506), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 53/397 (13%), Positives = 110/397 (27%), Gaps = 47/397 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   +   +             +  A K  +   +   + +      + S  E
Sbjct: 28  GTPLWVYDAATIRARIAQLK-AFD----TIRFAQKACSNIHILRLMREQGVKVDAVSRGE 82

Query: 63  VMLGHEKFGGE--------THAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ-K 113
           ++                    +     D    A ++  +  +      ++     AQ  
Sbjct: 83  ILRALAAGYAAGHGDDLHSDIVFTADVMDEATLACVA--EHKVPVNAGSIDMLHQLAQAS 140

Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNC 167
               + LRINP   +      +     S+ G    D + +          + GL  H   
Sbjct: 141 PGHPVWLRINPGFGHGHSNKTNTGGEHSKHGIWHSDLLAALQAIRDGGLKLAGLHMHIGS 200

Query: 168 ENKSFLCFSAMLKNIE--KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-- 223
                         +E  +        ++ IS GGG+    +D              +  
Sbjct: 201 GVDYGHLQQVCGAMVELVRATRQAGHDLQAISAGGGLSIPYRDGDATIDTAHYHGLWDAA 260

Query: 224 --------KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLL 274
                    +++ + +EPG  +V  +  L   V        N  + VD+     +   + 
Sbjct: 261 RKDAEAIVGHALGLEIEPGRFLVAESGVLLGQVRATKNAGSNHFVLVDTGFNELMRPSMY 320

Query: 275 YQESATIYPNTGPY-----TAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFED 322
                               A+V G  C +GD+F +               +GD +   D
Sbjct: 321 GSWHGMEVLRRDGQAMPLRDAVVAGPLCESGDVFTQGDGGVVLPRALAGASVGDLLVIHD 380

Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
              Y  +  + +N   +    + + D T    R  + 
Sbjct: 381 TGAYGSSMSSNYNTRPLAAEVLVDGDSTRLIRRRQTV 417


>gi|312277664|gb|ADQ62321.1| Diaminopimelate decarboxylase [Streptococcus thermophilus ND03]
          Length = 417

 Score =  199 bits (506), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 59/393 (15%), Positives = 116/393 (29%), Gaps = 31/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   ++  
Sbjct: 20  PTPFHLYDEKGIRETARAVNAAFSWNPGFKEFFAVKATPNPAILKILKEEGCGVDCATDT 79

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           E+++ ++  F     ++     D   +  +   D      +          +       L
Sbjct: 80  ELVMSNKVGFDSTAISFTSN--DTRAEEFVYARDINAIINLDAYEDIFFLEESAGLPETL 137

Query: 121 RINPSVSYSKFIL--ADPNRPFSRLGEKCKDKI----ESEIKNVNGLMFH------NNCE 168
            +  +      +      +   S+ G   +         + K V     H          
Sbjct: 138 SLRFNPGGVFLLGTDIMDHPEESKFGMTKEQLFKGYAYLKEKGVKSFGLHAFLASNTVTN 197

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
                  + + +   +        +++I+L GG+         ++    + E       +
Sbjct: 198 EYYPTLAAQLFELAVEIKNELGISLDFINLSGGVGVDYTPANKQNDIAAIGEGVHTKFDE 257

Query: 229 I-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
           I           Y E G  +      L T VL I +  +  V VD+S    +   +    
Sbjct: 258 ILVPNDLGDISIYTELGRFMTAPHGLLVTKVLHIKDTYRRYVGVDASAVNLLRPAMYDAY 317

Query: 278 SATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                            V G  C   D F +       +IGD +   D   +  +    +
Sbjct: 318 HHITNMTNPNGDIQVVDVTGSLCENNDKFAKNRELPEARIGDTLVIHDTGAHGFSMGYNY 377

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       +   DGT + IR   + NDY+  L
Sbjct: 378 NGRLRSAEILYQEDGTARMIRRAETMNDYFATL 410


>gi|281419868|ref|ZP_06250867.1| diaminopimelate decarboxylase [Prevotella copri DSM 18205]
 gi|281405995|gb|EFB36675.1| diaminopimelate decarboxylase [Prevotella copri DSM 18205]
          Length = 385

 Score =  199 bits (506), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 71/370 (19%), Positives = 129/370 (34%), Gaps = 28/370 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALY-IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           I+TP+Y  D   L   L T      K+ G ++  A+K  A   + + + Q   G    S 
Sbjct: 13  IQTPFYYYDTNVLRQTLKTINEEAGKHEGFEVHYAVKANANPKVLNIICQAGLGADCVSG 72

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115
            E+       F      Y    K      +        FN  ++ +L    + A  Q   
Sbjct: 73  GEIQAAIKAGFPASKIVYAGVGKSDWEINLGLEKGIFCFNVESIPELEIINELAEKQNKI 132

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE 168
            ++  RINP V              ++ G          ++  + +     GL FH   +
Sbjct: 133 AQVCFRINPDVGAHTHANITTGLAENKFGIAMRDMEAVIEEAAKMKNIQFLGLHFHIGSQ 192

Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
                 F      +  ++ +       ++ I++GGG+      +P +      K++ + Y
Sbjct: 193 ILDMGDFEALCNRINELQNQLEAHHIVVKNINVGGGLGIDYN-HPNRQPIPNFKDYFDTY 251

Query: 226 S--------VQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL-- 274
           +         +++ E G A+V    +L T  L I +   K   IVD+ +   +   L   
Sbjct: 252 AKKLKLRDGQKLHFELGRAVVGQMGSLITKTLYIKQGTAKQFAIVDAGMTDLIRPALYQA 311

Query: 275 YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
           Y +   I  +    T  V G  C + D+FG+         GD I+      Y     + +
Sbjct: 312 YHKIENISSDEPVETYDVVGPICESSDVFGKAVDINKAHRGDLIALRSAGAYGEIMASQY 371

Query: 335 NGINMPTIAV 344
           N   +P   +
Sbjct: 372 NCRQLPKGYI 381


>gi|256377328|ref|YP_003100988.1| diaminopimelate decarboxylase [Actinosynnema mirum DSM 43827]
 gi|255921631|gb|ACU37142.1| diaminopimelate decarboxylase [Actinosynnema mirum DSM 43827]
          Length = 437

 Score =  199 bits (506), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 54/390 (13%), Positives = 117/390 (30%), Gaps = 30/390 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP  ++D+  +         +      +++ A K      ++  +          S  E
Sbjct: 49  GTPCQVLDEGTVRARARGFREVLPE--AEVVFAGKALPCRAVYRWVADEGLSLDVCSAGE 106

Query: 63  VMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + +     F  E    +      +    A+      ++ ++  ++ +    A+     + 
Sbjct: 107 LAIARSVGFPAERILLHGNVKTPEDLKAALGYGVGRVVVDSFDEIEQLGALARGPQD-VL 165

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCENK 170
           +R+ P V               + G               +E     + GL  H   + +
Sbjct: 166 VRVTPGVDPRTHRAVATGVEDQKFGFPLAGGDALEAVLRVVEQPSLRLVGLHCHVGSQVR 225

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYS 226
               +    + +         +IE + LGGG          ++ +  F  R++       
Sbjct: 226 HVAVYEEAARRMVGLIASCGVRIEQLDLGGGFAVPYLPGEGEFDLGGFAHRVRVALSHEC 285

Query: 227 -------VQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQES 278
                   ++ +EPG ++V         V  +   ++   V VD  +  +    L     
Sbjct: 286 ALRRVPVPRLLIEPGRSVVAGAGVTLYRVAAVKRGVRRVFVAVDGGMSDNPRPALYGSRY 345

Query: 279 ATIYPNTG--PYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFN 335
           A      G       V GR C AGD+  E       V+ GD ++      Y+    + +N
Sbjct: 346 AVRLVGRGGRRAPVTVVGRHCEAGDVLAEDVPLPADVRAGDLLAVPVTGAYHHALASNYN 405

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            +  P +           +R  +  D    
Sbjct: 406 AVGRPPVVGVRDGVARVLVRRETEEDVLRR 435


>gi|291284165|ref|YP_003500983.1| Diaminopimelate decarboxylase [Escherichia coli O55:H7 str. CB9615]
 gi|209760944|gb|ACI78784.1| diaminopimelate decarboxylase [Escherichia coli]
 gi|290764038|gb|ADD57999.1| Diaminopimelate decarboxylase [Escherichia coli O55:H7 str. CB9615]
          Length = 420

 Score =  199 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 58/393 (14%), Positives = 117/393 (29%), Gaps = 46/393 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D      +S     +   +V  L++    +     ++
Sbjct: 82  RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G  C D       I+     + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWCTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                    + +    F   ++ IS GGG+             + Y       R +    
Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     +      +V G  C +GD+F        E      VK GD +   D   Y
Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
             +  + +N   +    + +        R  + 
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411


>gi|333000921|gb|EGK20491.1| diaminopimelate decarboxylase [Shigella flexneri K-272]
          Length = 420

 Score =  199 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 57/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAALKQFEV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D      +S     +   +V  L++    +     ++
Sbjct: 82  RALAAGYNPQTHPDDIVFTADVIDQATLECVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G          D I+     + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRYHLQLVGIHMHIGSGVDYA 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                    + +    F   ++ IS GGG+             + Y       R +    
Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     +      +V G  C +GD+F        E      VK GD +   D   Y
Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
             +  + +N   +    + +        R  + 
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411


>gi|297626227|ref|YP_003687990.1| Diaminopimelate decarboxylase (DAP decarboxylase)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296921992|emb|CBL56554.1| Diaminopimelate decarboxylase (DAP decarboxylase)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 543

 Score =  199 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 61/402 (15%), Positives = 119/402 (29%), Gaps = 42/402 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P YL D+    +               +  A K      +   + +   G    S  E
Sbjct: 139 GSPLYLFDEDDFRHRARDFKSAFDGWN--VYYAGKAMLTRTIARLVMEEGLGMDVCSGGE 196

Query: 63  VMLGHEK-FGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           + +             +   K  D    A+ +    I+ +++ ++ + +        H +
Sbjct: 197 LQVALAGGMDPARIGMHGNNKTSDELALALSNGVGHIVVDSLDEIGRIEQLCRDNDWHAR 256

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168
           + +R+ P V               + G                 S   ++ G+  H   +
Sbjct: 257 VMVRVTPGVEAHTHEYIATAHEDQKFGFSIANGQAMVAMVRCHYSPYMDLLGIHSHIGSQ 316

Query: 169 NKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F       +K   +        +  ++LGGG                L     +
Sbjct: 317 IFDTGGFEVAALRTMKLSSQFTDATGVHLPELNLGGGFGIAYTSADSPSTPDALATGLRE 376

Query: 225 YSVQ-----------IYLEPGEAIVTNTTTLNTTVLDISEN------IKNLVIVDSSVEA 267
                          + +EPG AIV  TT    TV  +          +  V VD  +  
Sbjct: 377 IVEHEARAHSMAVPKMSIEPGRAIVGPTTMAIYTVGTVKVVDLDGGGQRVYVSVDGGMSD 436

Query: 268 HVPDYLLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFED 322
           ++   L   E + +  N         + V G+ C  GDI     F    ++ GD I+  D
Sbjct: 437 NIRPALYGAEYSAVLANRTSSEPGVLSRVVGKHCEGGDILVRDVFLPSDIEPGDLIAVPD 496

Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +  Y+    + +N    P +   +       IR  + +D  +
Sbjct: 497 MGAYSREMASNYNHALRPPVVRVHNGELSAMIRRETMDDLLS 538


>gi|295398186|ref|ZP_06808232.1| diaminopimelate decarboxylase [Aerococcus viridans ATCC 11563]
 gi|294973536|gb|EFG49317.1| diaminopimelate decarboxylase [Aerococcus viridans ATCC 11563]
          Length = 417

 Score =  199 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 61/394 (15%), Positives = 121/394 (30%), Gaps = 29/394 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           I TP++L D+  + +           N       A+K      +   + +   G   +S 
Sbjct: 20  IPTPFHLYDEAGIRDRCRRLKKAFSWNPNFHEYFAVKATPNPHVLKIMQEEGMGVDCASY 79

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E++L  +  F G    ++       +          I F+ ++ ++ FK+   +  + +
Sbjct: 80  TELVLADKVGFSGHDIMFSSNVTPAADFKKAAELGAIINFDDITHIDFFKEHVGEFPETV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD----KIESEIKNVN--GLMFHNNCENKSF 172
            +R NP  ++        N   ++ G   +       +     V   G+       + S 
Sbjct: 140 CIRYNPGGTFEVANGIMDNPGDAKYGMTPEQTRQAFQKLADYGVKNIGIHSFLVSGSTSN 199

Query: 173 LCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
             +      + +   +        I +I+L GG+    K          + +   +    
Sbjct: 200 EYYPKLARTLFELAVELKDQTDLNITFINLSGGVGVAYKPEETPADIDIIGDGVRQAYED 259

Query: 229 I-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
           I           + E G  ++     L   VL      K+ + +D+S    +   +    
Sbjct: 260 IMEPAGLGDVAIFTELGRWMLAENGGLVAKVLHEKITYKDYIGLDASASDLLRPAMYGAY 319

Query: 278 SATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                      T      V G  C   D F          IGD I   D   +  +    
Sbjct: 320 HHISVLGKEDETADQTYDVTGGLCENNDKFAIDRQLPKTNIGDYIWIHDAGAHGASMGYQ 379

Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           +N        +   DGT K IR   +  DY+  +
Sbjct: 380 YNAKLRSAEVMLKEDGTFKQIRRPETPEDYFATM 413


>gi|55820349|ref|YP_138791.1| diaminopimelate decarboxylase [Streptococcus thermophilus LMG
           18311]
 gi|55822239|ref|YP_140680.1| diaminopimelate decarboxylase [Streptococcus thermophilus CNRZ1066]
 gi|55736334|gb|AAV59976.1| diaminopimelate decarboxylase [Streptococcus thermophilus LMG
           18311]
 gi|55738224|gb|AAV61865.1| diaminopimelate decarboxylase [Streptococcus thermophilus CNRZ1066]
          Length = 421

 Score =  199 bits (505), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 59/393 (15%), Positives = 116/393 (29%), Gaps = 31/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   ++  
Sbjct: 24  PTPFHLYDEKGIRETARAVNAAFSWNPGFKEFFAVKATPNPAILKILKEEGCGVDCATDT 83

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           E+++ ++  F     ++     D   +  +   D      +          +       L
Sbjct: 84  ELVMSNKVGFDSTAISFTSN--DTRAEEFVYARDINAIINLDAYEDIFFLEESAGLPETL 141

Query: 121 RINPSVSYSKFIL--ADPNRPFSRLGEKCKDKI----ESEIKNVNGLMFH------NNCE 168
            +  +      +      +   S+ G   +         + K V     H          
Sbjct: 142 SLRFNPGGVFLLGTDIMDHPEESKFGMTKEQLFKGYAYLKEKGVKSFGLHAFLASNTVTN 201

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
                  + + +   +        +++I+L GG+         ++    + E       +
Sbjct: 202 EYYPTLAAQLFELAVEIKNELGISLDFINLSGGVGVDYTPANKQNDIAAIGEGVHTKFDE 261

Query: 229 I-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
           I           Y E G  +      L T VL I +  +  V VD+S    +   +    
Sbjct: 262 ILVPNDLGDISIYTELGRFMTAPHGLLVTKVLHIKDTYRRYVGVDASAVNLLRPAMYDAY 321

Query: 278 SATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                            V G  C   D F +       +IGD +   D   +  +    +
Sbjct: 322 HHITNMTNPNGDIQVVDVTGSLCENNDKFAKNRELPEARIGDTLVIHDTGAHGFSMGYNY 381

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       +   DGT + IR   + NDY+  L
Sbjct: 382 NGRLRSAEILYQEDGTARMIRRAETMNDYFATL 414


>gi|87306324|ref|ZP_01088471.1| diaminopimelate decarboxylase [Blastopirellula marina DSM 3645]
 gi|87290503|gb|EAQ82390.1| diaminopimelate decarboxylase [Blastopirellula marina DSM 3645]
          Length = 423

 Score =  199 bits (505), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 58/399 (14%), Positives = 116/399 (29%), Gaps = 45/399 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D  K++  ++            +  A K  +   + D + +      + S +E
Sbjct: 27  GTPTFVYDAAKIVERIEDLR-AFDV----IRYAQKACSNLAILDLMRKNGVMVDAVSAWE 81

Query: 63  VMLGHEKF-----GGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHK 116
           +                  Y     D E  A+       +   +   + +  + A     
Sbjct: 82  IRRALAAGYGAKGEPAPLVYTADIFDHEALALCVEHGLHVNCGSPDMIAQLGEAA--PGS 139

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170
           +I LRINP   +      +     S+ G   +         +     V GL  H      
Sbjct: 140 EITLRINPGFGHGHSQKTNTGGQQSKHGIWHEQLHECLLIADQHGVRVTGLHMHIGSGTD 199

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFSEK-- 224
                + +  ++EK        I  IS GGG+            +  + +      ++  
Sbjct: 200 -LEHLAQVCGSMEKAALEVGRTITTISAGGGLPIPYNASQTYVDLDQYFELWNGVRKRLQ 258

Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-PDYLLYQESA 279
               ++V + +EPG  +   +  L   +  I    +N   V  +   ++    L      
Sbjct: 259 DSFGHTVSLEIEPGRYLSAESGFLLAEIRAIKTMGENKFYVVDAGFNNLARPILYGSYHP 318

Query: 280 TIYPNTGPYT-------AMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVAG 325
                    T        +V G  C +GDIF +               IGD +  E    
Sbjct: 319 MSIALASGETDERPHLDVVVGGPLCESGDIFTQEEGGFVGTRSLPAASIGDFLVIECAGA 378

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y     + +N   +    +     T       ++ +   
Sbjct: 379 YGFVMGSNYNSKPLAAEVLIRDGQTHLIRERQTFENLIA 417


>gi|329116995|ref|ZP_08245712.1| putative diaminopimelate decarboxylase [Streptococcus parauberis
           NCFD 2020]
 gi|326907400|gb|EGE54314.1| putative diaminopimelate decarboxylase [Streptococcus parauberis
           NCFD 2020]
          Length = 412

 Score =  199 bits (505), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 67/388 (17%), Positives = 126/388 (32%), Gaps = 27/388 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   ++  
Sbjct: 19  PTPFHLYDEKGIREKARALNKAFSWNKGFKEYFAVKATPTPAILKILQEENCGVDCATDV 78

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E+++ HE    +    +   K  E         TI  ++  Q+   K     L + I LR
Sbjct: 79  ELLMSHELGFTDVMFSSNNTKASEYQYARQINATINLDSYDQIGFLKAI-TSLPETISLR 137

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN----KS 171
            NP  +++       +   S+ G   +        ++++     G+              
Sbjct: 138 YNPGGTFTLGTAIMDHPQESKFGMTKEQLFQGIRDLKADGVQSFGIHSFLASNTVTNDYY 197

Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY- 230
                 +     +       ++++I+L GGI    +     +    + E   K   ++  
Sbjct: 198 PELARDLFNLAVEIKDQLGVKLDFINLSGGIGVNYRPEEKANDIAVIGEGVRKVYQEVIE 257

Query: 231 ----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280
                      E G  ++     L TTVL   E  K  V VD+S    +   +       
Sbjct: 258 PHNLGDLKIFTELGRFMLAPHGHLITTVLHRKETYKKYVGVDASAVNLLRPAMYGSYHHI 317

Query: 281 I---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
               +P     T  V G  C   D F +       +IGD +   D   +  +    +NG 
Sbjct: 318 TNSSHPLADFETVDVVGSLCENNDKFAKDRQLPKAEIGDILVIHDTGAHGFSMGYQYNGR 377

Query: 338 NMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
                 +   +G  + IR   +  DY+ 
Sbjct: 378 LRSAEILLKENGDTRLIRRAETPEDYFA 405


>gi|326791961|ref|YP_004309782.1| diaminopimelate decarboxylase [Clostridium lentocellum DSM 5427]
 gi|326542725|gb|ADZ84584.1| diaminopimelate decarboxylase [Clostridium lentocellum DSM 5427]
          Length = 417

 Score =  199 bits (505), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 59/391 (15%), Positives = 118/391 (30%), Gaps = 29/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+ ++  L        ++          ++K      +   +++        S  E
Sbjct: 28  GSPLYIYNENILRTRCREMKHLVSYENFVPHYSIKANTNIHLLKIVHEEGLHADVMSPGE 87

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTII-FNTVSQLNKFKDKAQKLHKKIGL 120
           + L  E  F  E   +       E      + + +   +++ QL  +         K+ +
Sbjct: 88  IYLALESGFSPEELFFIPNNVVAEDMLYAIDRNIMTSVDSLDQLELYGQL--NPGGKVAI 145

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVNGLMFHNNCENKSFLCFS 176
           R NP V              ++ G   +   E     E  N+     + +  +       
Sbjct: 146 RFNPGVGAGHHEKVVTGGKKTKFGVNPEYIPEVKRLLETYNLTLAGINQHIGSLFMDGAP 205

Query: 177 AMLKNIEK-EFGHFITQIEWISLGGGIHFTDKDYPVKD--FCQRLKEFSEK--------- 224
            +               +E+I LGGG          +     + L E  +          
Sbjct: 206 YIESLGSILSIAKQFDDLEFIDLGGGFGIPYHKQDGEARLNIKALGEALDPVLSSFAKEY 265

Query: 225 -YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +VQ  +EPG  I   +  L  TV     N  +  +        +   ++Y     I  
Sbjct: 266 GKNVQFQIEPGRYIPCESCALVGTVTATKTNADHDYVGCDIGFNVLQRPIMYDSHHDIEI 325

Query: 284 NTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKI-GDRISFEDVAGYNINRKNWFNG 336
            +            V G  C +GDI  +        + GD I+  D   Y  +  + +N 
Sbjct: 326 YSRELKEAPLGPLTVVGNICESGDILAKDRMLPLTTVRGDLIALMDAGAYGYSMASCYNQ 385

Query: 337 INMPTIAVKNVDGTIK-AIREFSYNDYYNNL 366
              P   +  +DG ++   +  +  D   N+
Sbjct: 386 RFRPAEILIGLDGKVRQIRKRDTLEDLIRNM 416


>gi|225548244|ref|ZP_03769529.1| hypothetical protein RUMHYD_00223 [Blautia hydrogenotrophica DSM
           10507]
 gi|225040584|gb|EEG50830.1| hypothetical protein RUMHYD_00223 [Blautia hydrogenotrophica DSM
           10507]
          Length = 427

 Score =  199 bits (505), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 65/391 (16%), Positives = 124/391 (31%), Gaps = 29/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +  N          N G K   A+K      +   L +Y  G   SSL 
Sbjct: 20  PTPFHLYDEKGIRENAKALKEAFAWNKGYKEYFAVKATPNPYLIQILQEYGCGCDCSSLT 79

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+M+       G+   ++       E +        I  + ++ ++  +     + KKI 
Sbjct: 80  ELMMAKALGCKGDDIMFSSNATPANEYEYARKIGAIINLDDITHIDFLEKVTGSIPKKIS 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN---- 169
            R NP   +        N   ++ G   +        ++S+     G+            
Sbjct: 140 CRYNPGGLFKISNDIMDNPGDAKYGMTTEQIFEAFKILKSKGAQEFGIHAFLASNTVTND 199

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
                   + +   K       +I +I+L GGI    +     +  + + E   K   ++
Sbjct: 200 YYPTLAKVLFEVAVKLKEETGAKITFINLSGGIGIPYRPDQTANDIRVIGEGVRKVYEEV 259

Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                      Y E G  ++     L TT +      K  +  D+     +   +     
Sbjct: 260 LVPAGMGDVALYTELGRFMMGPYGALVTTAIHEKHTYKEYIGCDACAANLMRPAMYGAYH 319

Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +T  V G  C   D F        +++GD +   D   +  +    +
Sbjct: 320 HITVMGKEDAPCDHTYDVTGSLCENNDKFAIDRKLPKIEMGDLLFLHDAGAHGFSMGYNY 379

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   DG+ + IR      DY+ 
Sbjct: 380 NGKLRSAEILLKEDGSYQMIRRAEKPQDYFA 410


>gi|254374911|ref|ZP_04990392.1| diaminopimelate decarboxylase [Francisella novicida GA99-3548]
 gi|151572630|gb|EDN38284.1| diaminopimelate decarboxylase [Francisella novicida GA99-3548]
          Length = 394

 Score =  199 bits (505), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 63/372 (16%), Positives = 119/372 (31%), Gaps = 30/372 (8%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           TP Y+ D + L +    A           ++  A+K      + D   +Y  G    S  
Sbjct: 23  TPCYIYDLELLEDTFLNAKKSLDKNFKNAEIHYAIKANHNPKIVDIAKKYGMGIDCVSGG 82

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK--FKDKAQKLHK-- 116
           E+    E K   +   +    K      +  + D   FN+ S          AQ+ +K  
Sbjct: 83  EIKRALEQKVDSQHIVFAGVGKADWEIELAIDNDIFAFNSESLEEIQVINQIAQRKNKKV 142

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE--------IKNVNGLMFHNNCE 168
            I LR+NP++           +   + G    D +             N+ GL +H   +
Sbjct: 143 NICLRVNPNIDAQTHHYISTGQFDDKFGIAFVDILNWLKDEYRNFANINIIGLHYHVGSQ 202

Query: 169 NKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLK 219
             ++  F           +        I+ I+ GGG+                 +  R +
Sbjct: 203 ILNYQVFQSLAITTNEHIRLLKQNDINIKHINFGGGLGIDYQNPQQNPIVDFDGYFARFR 262

Query: 220 EFSEKYSV-QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQE 277
           EF E      ++ E G ++V  +  L + VL        + VI+D+ +   +   L   +
Sbjct: 263 EFFEYCDELTLHFELGRSLVGQSGVLVSQVLFNKVTQGTHFVIIDAGMTELIRPALYQAQ 322

Query: 278 S----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                             + G  C + D+F +++    +K GD ++      Y     + 
Sbjct: 323 HKIAALIDENINQKQHYHIVGPICESSDVFAKYYQLPKLKRGDLLAIYSAGAYGKVLASE 382

Query: 334 FNGINMPTIAVK 345
           +N          
Sbjct: 383 YNLRPSVQEYFI 394


>gi|313113931|ref|ZP_07799489.1| putative diaminopimelate decarboxylase [Faecalibacterium cf.
           prausnitzii KLE1255]
 gi|310623770|gb|EFQ07167.1| putative diaminopimelate decarboxylase [Faecalibacterium cf.
           prausnitzii KLE1255]
          Length = 428

 Score =  199 bits (505), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 63/399 (15%), Positives = 118/399 (29%), Gaps = 35/399 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           + TP+++ D++ +  N          N G K   A+K      +   L +   G   SSL
Sbjct: 19  VPTPFHVYDEKGIRENARRINKAFSWNKGFKEYFAVKALPNPVILQILKEEGCGVDCSSL 78

Query: 61  YEVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKA-----QK 113
            E+ML     F G    ++       ++         I  +  + +   +  A       
Sbjct: 79  TELMLSEVCGFSGSEIMFSSNQTPVEDMKKAYELGSYINLDDATMVEFLERVAGVPENIF 138

Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE---------IKNVN-GLMF 163
                G   +   S   F + D     ++ G   +  IES             ++  L  
Sbjct: 139 CRYNPGGTFSLGESEEGFQVMDKPG-DAKYGMTEEQMIESYKKLAAKGAKNFGIHAFLAS 197

Query: 164 HNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223
           +   +         + +   +        I +I+L GG+    +    ++    + E   
Sbjct: 198 NTISDEYYPELAGILFQLAVRVQKATGVHIGYINLSGGVGIPYRPEQTENDIMAIGEGVR 257

Query: 224 KYSVQI-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY 272
           K   +I           + E G         L  T +      K  + +D+     +   
Sbjct: 258 KKFEEILVPAGMGDVAIFTEMGRFTTGPYGALVATAIHEKHIYKEYIGLDACAANLMRPA 317

Query: 273 LLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
           +                  +   V G  C   D F        + IGD +   D   +  
Sbjct: 318 MYGAYHHITVLGKENESCDHMYDVVGGLCENNDKFAIDRMLPKIDIGDIVYIHDTGAHGS 377

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                +NG       +   DGT + IR   +  DY+  L
Sbjct: 378 AMGYNYNGKLRSAEVLLCEDGTHRLIRRAETPRDYFATL 416


>gi|282855373|ref|ZP_06264697.1| diaminopimelate decarboxylase [Pyramidobacter piscolens W5455]
 gi|282586794|gb|EFB92038.1| diaminopimelate decarboxylase [Pyramidobacter piscolens W5455]
          Length = 436

 Score =  199 bits (505), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 56/395 (14%), Positives = 108/395 (27%), Gaps = 33/395 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+  L +              ++  A K F    M   +++      + S  E
Sbjct: 21  GTPLYVMDETMLRDRCRRLSAAVAGRNARVCYAGKAFLNVAMARLVDEEGLCLDTVSPGE 80

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
             +     F  E    +   K     A        T+  ++  +L         +   +K
Sbjct: 81  FRIACAAGFPMERVTLHGNAKTEAFLAAGLERGVGTVAVDSEDELALLARLCAKRGARQK 140

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           I LR++P +           +   + G        +          ++ GL  H   + +
Sbjct: 141 ILLRLSPGIEAHTHRFIQTAQKDCKFGVPLAHLERAVRFALGATGLDLAGLHVHVGSQIR 200

Query: 171 ----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226
                      M + +             + LGGG    ++        +R         
Sbjct: 201 DVGTYLQAADRMTEIMRSLREATGFAARELDLGGGFGIPERPGAAGAPAERFVAAILDRV 260

Query: 227 VQIY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYL 273
                           EPG  +         TV  + E       V     +  +    L
Sbjct: 261 DARCAELRLARPEVAFEPGRWVAGEAGITLYTVQGVKEIPGVRTYVAVDGGMTDNPRPQL 320

Query: 274 LYQESATIYPNTGPYTAM----VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
              E      N     A     + G  C  GD+         ++ GD ++      YN +
Sbjct: 321 YQAEYGVRLANDTERPANRRAAIAGPCCETGDVLTLDTPVPELRRGDVLAVPLTGAYNYS 380

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             + +N    P +          A+R  + ++  N
Sbjct: 381 MFSTYNCALRPAVIFARDGQARVAVRRQTLDELLN 415


>gi|306835847|ref|ZP_07468843.1| diaminopimelate decarboxylase [Corynebacterium accolens ATCC 49726]
 gi|304568264|gb|EFM43833.1| diaminopimelate decarboxylase [Corynebacterium accolens ATCC 49726]
          Length = 445

 Score =  199 bits (505), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 59/404 (14%), Positives = 132/404 (32%), Gaps = 43/404 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP Y+ D+    +               +  A K F +  +   +N+      +++L E
Sbjct: 39  QTPLYVFDEDDFRSRCQDMARAFGGPDH-VHYASKAFISKKVVQWVNEEGLCLDAAALNE 97

Query: 63  VMLGHEK-FGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F       +   KD E   +        ++ +   +L +    A +    + 
Sbjct: 98  LKIALAAEFPAARITAHGNNKDEEYLRLCVDAGVGHVVIDNEQELEELNRIAGEAGVVQP 157

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + +R+ P V          +    + G            K  +E +  +++GL  H   +
Sbjct: 158 VMIRVKPGVDAHTHEFIATSHEDQKFGISLATGAAFAAAKRCLEVDNLHLSGLHCHVGSQ 217

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY-----------PVKD 213
             +   F      +L+   +        +  + LGGG       Y            +  
Sbjct: 218 VFNAEGFKLAAERVLELYRQIHTELGVDLADLDLGGGFGIPYMPYEEALDIDRVAQDMLR 277

Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE--------NIKNLVIVDSSV 265
              +  E  +  +  + +EPG ++V  +      V  + +         ++  + +D  +
Sbjct: 278 AVDQTAEELDIKAPFLLVEPGRSLVAGSAVTVYRVGTVKDVETGKADLPVRRYISIDGGM 337

Query: 266 EAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISF 320
             ++   L   E        + +     + + G  C +GDI  E       ++ GD ++F
Sbjct: 338 SDNIRPALYGSEYDVRLVNRFSDGEMVPSRIVGFHCESGDILLEEGELPNDIQPGDLLAF 397

Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
               GY     + +NG   P +    V  T   +R  +  D  +
Sbjct: 398 AATGGYQYMMSSRYNGAVRPAVVATRVGNTKPMLRRETIEDLLS 441


>gi|331654321|ref|ZP_08355321.1| diaminopimelate decarboxylase [Escherichia coli M718]
 gi|331047703|gb|EGI19780.1| diaminopimelate decarboxylase [Escherichia coli M718]
          Length = 420

 Score =  199 bits (505), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 57/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D      +S     +   +V  L++    +     ++
Sbjct: 82  RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G          D I+     + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                    + +    F   ++ IS GGG+             + Y       R +    
Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAARQQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     +      +V G  C +GD+F        E      VK GD +   D   Y
Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRTLPEVKAGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
             +  + +N   +    + +        R  + 
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411


>gi|268325882|emb|CBH39470.1| probable diaminopimelate decarboxylase [uncultured archaeon]
          Length = 432

 Score =  199 bits (505), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 61/395 (15%), Positives = 124/395 (31%), Gaps = 34/395 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP ++I ++++  N +             +  + K      + + L+    G    S +
Sbjct: 35  GTPLFVISEKQVRQNYNRLRKAFSRYPDCTIAYSYKTNYLPAVCNILHHEGAGAEVVSAF 94

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118
           E++L  +         +N   K  +   +    D   +  +++ +L +    A+   K +
Sbjct: 95  ELLLAKKLGMPSSKIIFNGPGKSDKEIEMFIGDDIALVNADSMEELERINQIAKAKGKIV 154

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCK---DKIESEIKNVNGLMFHNNCENK----S 171
            + I        F +          G+  K      E +  NV G+  H   +       
Sbjct: 155 DVGIRVKPDVPDFFVCPKFGMDIATGQAFKAYQKASELKNLNVVGMHAHIGTKICSTRSY 214

Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFT-----DKDYPVKDFCQRLKEFSEK-- 224
                 M K + K       + E+  +GGG                +    +++F E   
Sbjct: 215 TEGIRQMAKLMSKVNAELGIEFEFFDIGGGFGVPSFTPLFPTEEKVESTATIEQFGESIV 274

Query: 225 ------------YSVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVP 270
                           + LE G  I+T+   + T V    +       V+VD+ V   + 
Sbjct: 275 EAFLSCISDYNLSEPTLVLELGRIIITDPALILTMVEGTKVIGGSTKTVVVDAGVNLIMF 334

Query: 271 DYLLYQESATIYPNT-GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
               Y     +           V G  C+  D+ G       +  G  ++  D   Y+I+
Sbjct: 335 APYYYHRIVPVVNTERAKEAVDVYGPLCMQMDVLGVNRKLPVLVRGFFLAILDAGAYSIS 394

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
               F     P + + N        R  +++D +N
Sbjct: 395 LSQQFI-RPRPPVVMVNGGRKRLVRRGETFDDIFN 428


>gi|312862511|ref|ZP_07722753.1| putative diaminopimelate decarboxylase [Streptococcus vestibularis
           F0396]
 gi|311101916|gb|EFQ60117.1| putative diaminopimelate decarboxylase [Streptococcus vestibularis
           F0396]
          Length = 417

 Score =  199 bits (505), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 64/393 (16%), Positives = 121/393 (30%), Gaps = 31/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   ++  
Sbjct: 20  PTPFHLYDEKGIRETARAVNAAFSWNPGFKEFFAVKATPNPAILKILKEEGCGVDCATDT 79

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKI 118
           E+++ ++  F     ++     D   +  +   D      +           A  L + +
Sbjct: 80  ELVMSNKIGFDSTAISFTSN--DTRAEEFVYARDINATINLDAYEDIFFLEEAAGLPETL 137

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKI----ESEIKNVNGLMFH------NNCE 168
            LR NP   +S       +   S+ G   +         + K V     H          
Sbjct: 138 SLRFNPGGVFSLGTDIMDHPEESKFGMTKEQLFKGYAYLKEKGVKSFGLHAFLASNTVTN 197

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
                  + + +   +        +++I+L GG+         ++    + E       +
Sbjct: 198 EYYPTLAAQLFELAVEIKNELGVSLDFINLSGGVGVDYTPANKQNDIAVIGEGVHTKFDE 257

Query: 229 I-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
           I           Y E G  +      + T VL I +  +  V VD+S    +   +    
Sbjct: 258 ILVPNDLGDISIYTELGRFMTAPHGLVVTKVLHIKDTYRRYVGVDASAVNLLRPAMYDAY 317

Query: 278 SATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                            V G  C   D F +       +IGD +   D   +  +    +
Sbjct: 318 HHITNMTNPNGDIQVVDVTGSLCENNDKFAKNRELPEARIGDTLVIHDTGAHGFSMGYNY 377

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       +   DGT + IR   + NDY+  L
Sbjct: 378 NGRLRSAEILYQEDGTARMIRRAETMNDYFATL 410


>gi|116627185|ref|YP_819804.1| diaminopimelate decarboxylase [Streptococcus thermophilus LMD-9]
 gi|116100462|gb|ABJ65608.1| diaminopimelate decarboxylase [Streptococcus thermophilus LMD-9]
          Length = 417

 Score =  199 bits (505), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 59/393 (15%), Positives = 116/393 (29%), Gaps = 31/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   ++  
Sbjct: 20  PTPFHLYDEKGIRETARAVNAAFSWNPGFKEFFAVKATPNPAILRILKEEGCGVDCATDT 79

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           E+++ ++  F     ++     D   +  +   D      +          +       L
Sbjct: 80  ELVMSNKVGFDSTAISFTSN--DTRAEEFVYARDINAIINLDAYEDIFFLEESAGIPETL 137

Query: 121 RINPSVSYSKFIL--ADPNRPFSRLGEKCKDKI----ESEIKNVNGLMFH------NNCE 168
            +  +      +      +   S+ G   +         + K V     H          
Sbjct: 138 SLRFNPGGVFLLGTDIMDHPEESKFGMTKEQLFKGYAYLKEKGVKSFGLHAFLASNTVTN 197

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
                  + + +   +        +++I+L GG+         ++    + E       +
Sbjct: 198 EYYPTLAAQLFELAVEIKNELGISLDFINLSGGVGVDYTPANKQNDIAAIGEGVHTKFDE 257

Query: 229 I-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
           I           Y E G  +      L T VL I +  +  V VD+S    +   +    
Sbjct: 258 ILVPNDLGDISIYTELGRFMTAPHGLLVTKVLHIKDTYRRYVGVDASAVNLLRPAMYDAY 317

Query: 278 SATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                            V G  C   D F +       +IGD +   D   +  +    +
Sbjct: 318 HHITNMTNPNGDIQVVDVTGSLCENNDKFAKNRELPEARIGDTLVIHDTGAHGFSMGYNY 377

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       +   DGT + IR   + NDY+  L
Sbjct: 378 NGRLRSAEILYQEDGTARMIRRAETMNDYFATL 410


>gi|118498099|ref|YP_899149.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           novicida U112]
 gi|194323325|ref|ZP_03057109.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           novicida FTE]
 gi|118424005|gb|ABK90395.1| diaminopimelate decarboxylase [Francisella novicida U112]
 gi|194322689|gb|EDX20169.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           novicida FTE]
          Length = 394

 Score =  199 bits (505), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 62/372 (16%), Positives = 119/372 (31%), Gaps = 30/372 (8%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           TP Y+ D + L +    A           ++  A+K      + D   +Y  G    S  
Sbjct: 23  TPCYIYDLELLEDTFLNAKKSLDKNFKNAEIHYAIKANHNPKIVDIAKKYGMGIDCVSGG 82

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK--FKDKAQKLHKK- 117
           E+    E K   +   +    K      +  + D   FN+ S          AQ+ +K+ 
Sbjct: 83  EIKRALEQKVDSQHIVFAGVGKADWEIELAIDNDIFAFNSESLEEIQVINQIAQRKNKQV 142

Query: 118 -IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE--------IKNVNGLMFHNNCE 168
            I LR+NP++           +   + G    D +              + GL +H   +
Sbjct: 143 NICLRVNPNIDAQTHHYISTGQFDDKFGIAFVDILNWLKDEYRNFANIKIIGLHYHVGSQ 202

Query: 169 NKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLK 219
             ++  F           +        I+ I+ GGG+                 +  R +
Sbjct: 203 ILNYQVFQSLAITTNEHIRLLRQNDINIKHINFGGGLGIDYQNPQQNPIVDFDGYFARFR 262

Query: 220 EFSEKYSV-QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQE 277
           EF E      ++ E G ++V  +  L + VL        + VI+D+ +   +   L   +
Sbjct: 263 EFFEYCDELTLHFELGRSLVGQSGVLVSQVLFNKVTQGTHFVIIDAGMTELIRPALYQAQ 322

Query: 278 S----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                             + G  C + D+F +++    +K GD ++      Y     + 
Sbjct: 323 HKIAALIDENINQKQHYHIVGPICESSDVFAKYYQLPKLKRGDLLAIYSAGAYGKVLASE 382

Query: 334 FNGINMPTIAVK 345
           +N          
Sbjct: 383 YNLRPSVQEYFI 394


>gi|324114871|gb|EGC08837.1| diaminopimelate decarboxylase [Escherichia fergusonii B253]
 gi|325498415|gb|EGC96274.1| diaminopimelate decarboxylase [Escherichia fergusonii ECD227]
          Length = 420

 Score =  199 bits (505), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 56/398 (14%), Positives = 113/398 (28%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D    A +S     +   +V  L +    +     ++
Sbjct: 82  RALAAGYDPLTSPDDIVFTADVIDSATLARVSELRIPVNAGSVDMLEQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G    D       I      + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHTDLPAALAVIARYELKLVGIHMHIGSGVDYA 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                    + +    F   +E IS GGG+             + Y       R +    
Sbjct: 200 HLEQVCGAMVSQVI-EFGQDLEAISAGGGLSIPYRDGEEAVDTEHYFGLWNAAREQIAHH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATI 281
             + V++ +EPG  +V  +  L   V  +     ++ V++D+     +   +        
Sbjct: 259 LGHRVKLEIEPGRFLVAQSGVLIAQVRSVKQMGRRHFVLIDAGFNDLMRPAMYGSYHRIT 318

Query: 282 YPNTGPYTAM--------VCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                  +          V G  C +GD+F        E      V  GD +   D   Y
Sbjct: 319 ALAADGRSFDNTPVVETVVAGPLCESGDVFTQQEGGTVETRELPQVAPGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    + +        R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 416


>gi|256024660|ref|ZP_05438525.1| diaminopimelate decarboxylase [Escherichia sp. 4_1_40B]
          Length = 420

 Score =  199 bits (505), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 56/393 (14%), Positives = 115/393 (29%), Gaps = 46/393 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D      +S     +   +V  L++    +     ++
Sbjct: 82  RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G          D I+     + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                    + +    F   ++ IS GGG+             + Y       R +    
Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA-- 279
             + V++ +EPG  +V  +  L T V  + +   +  + VD+     +   +        
Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSHHFVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     +      +V G  C +GD+F        E      VK GD +   D   Y
Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
             +  + +N   +    + +        R  + 
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411


>gi|261856756|ref|YP_003264039.1| diaminopimelate decarboxylase [Halothiobacillus neapolitanus c2]
 gi|261837225|gb|ACX96992.1| diaminopimelate decarboxylase [Halothiobacillus neapolitanus c2]
          Length = 430

 Score =  199 bits (505), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 56/387 (14%), Positives = 112/387 (28%), Gaps = 30/387 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +            +   ++  A+K  +   +   L +   G    S  E
Sbjct: 32  GTPTYVYSRSAIERAYTELTTAFGDRPHRICYAVKANSNLAILALLARLGAGFDIVSGGE 91

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +          E   ++     +D    A+ +    +   + ++L +  + A  L     
Sbjct: 92  LARVLKAGGAAEKIVFSGVGKTRDEIEQALRAGVGCLNVESEAELARISEVAAGLGVVAP 151

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
           I LR+NP V              ++ G   +                  G+  H   +  
Sbjct: 152 ISLRVNPDVDAKTHPYISTGLKDNKFGVPIEQAPALYRHIARDANLKAVGIDCHIGSQIT 211

Query: 171 SFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQR-------LKE 220
               F+   + +            ++  + LGGG+     D                +  
Sbjct: 212 DVSPFADAARRVLALLDTLVLEGIELAHLDLGGGLGIRYTDEQPPSAADWVDAVTSVIDR 271

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN---LVIVDSSVEAHVPDYLLYQE 277
                 + + LEPG+ +V  +  L + V  +  +  +     IVD+++   V   L    
Sbjct: 272 HPIARHLPLMLEPGKFLVGPSGVLLSRVEYLKPHPSDGKSFAIVDAAMNDLVRPALYGSV 331

Query: 278 SATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
            A       P        + G  C  GD  G       +  GD I+      Y  +  + 
Sbjct: 332 MAIEAVKPDPVMAAKDWEIVGPVCETGDFLGHGRSLA-LAQGDLIAVLGAGAYGFSMASN 390

Query: 334 FNGINMPTIAVKNVDGTIKAIREFSYN 360
           +N        + +  G        S  
Sbjct: 391 YNTRGRAAEVLVDERGATLIGARESVE 417


>gi|332678824|gb|AEE87953.1| Diaminopimelate decarboxylase [Francisella cf. novicida Fx1]
          Length = 394

 Score =  199 bits (505), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 63/372 (16%), Positives = 119/372 (31%), Gaps = 30/372 (8%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           TP Y+ D + L +    A           ++  A+K      + D   +Y  G    S  
Sbjct: 23  TPCYIYDLELLEDTFLNAKKSLDKNFKNAEIHYAIKANHNPKIVDIAKKYGMGIDCVSGG 82

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK--FKDKAQKLHK-- 116
           E+    E K   +   +    K      +  + D   FN+ S          AQ+ +K  
Sbjct: 83  EIKRALEQKVDSQHIVFAGVGKADWEIELAIDNDIFAFNSESLEEIQVINQIAQRKNKKV 142

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE--------IKNVNGLMFHNNCE 168
            I LR+NP++           +   + G    D +             N+ GL +H   +
Sbjct: 143 NICLRVNPNIDAQTHHYISTGQFDDKFGIAFVDILNWLKDEYHNFANINIIGLHYHVGSQ 202

Query: 169 NKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLK 219
             ++  F           +        I+ I+ GGG+                 +  R +
Sbjct: 203 ILNYQVFQSLAITTNEHIRLLKQNDINIKHINFGGGLGIDYQNPQQNPIVDFDGYFARFR 262

Query: 220 EFSEKYSV-QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQE 277
           EF E      ++ E G ++V  +  L + VL        + VI+D+ +   +   L   +
Sbjct: 263 EFFEYCDELTLHFELGRSLVGQSGVLVSQVLFNKVTQGTHFVIIDAGMTELIRPALYQAQ 322

Query: 278 S----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                             + G  C + D+F +++    +K GD ++      Y     + 
Sbjct: 323 HKIAALIDENINQKQHYHIVGPICESSDVFAKYYQLPKLKRGDLLAIYSAGAYGKVLASE 382

Query: 334 FNGINMPTIAVK 345
           +N          
Sbjct: 383 YNLRPSVQEYFI 394


>gi|298481756|ref|ZP_06999946.1| diaminopimelate decarboxylase [Bacteroides sp. D22]
 gi|298271978|gb|EFI13549.1| diaminopimelate decarboxylase [Bacteroides sp. D22]
          Length = 386

 Score =  199 bits (505), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 63/366 (17%), Positives = 119/366 (32%), Gaps = 26/366 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           ++TP+Y  D + L + L      + K     +  A+K  A   +   + +   G    S 
Sbjct: 13  LQTPFYYYDTKVLRDTLSAINQEVAKYPNYSVHYAVKANANPKVLTIIRESGMGADCVSG 72

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115
            E+       F  +   +    K      +        FN  ++ +L    + A  Q   
Sbjct: 73  GEIRAAIRAGFPADKVVFAGVGKADWEINLGLEYGIFCFNVESIPELEVINELAAAQNKI 132

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168
             +  RINP V              ++ G   +D         E +     GL FH   +
Sbjct: 133 ANVAFRINPDVGAHTHANITTGLAENKFGISMQDMDKVIDVAQEMKNVKFIGLHFHIGSQ 192

Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-------DFCQRL 218
                 F+     +  ++ +       +E I++GGG+         +        F    
Sbjct: 193 ILDMGDFVALCNRVNELQDKLEARRILVEHINVGGGLGIDYGHPNRQAVPNFKDYFATYA 252

Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQE 277
            +   +    ++ E G A+V    +L + VL + +  +    + D+ +   +   L    
Sbjct: 253 GQLKLRPYQTLHFELGRAVVGQCGSLISKVLYVKQGTRKKFAILDAGMTDLIRPALYQAF 312

Query: 278 S--ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                I          V G  C + D+FG+      VK GD I+      Y     + +N
Sbjct: 313 HKMENITSEEPLEAYDVVGPICESSDVFGKAIDLNKVKRGDLIALRSAGAYGEIMASGYN 372

Query: 336 GINMPT 341
              +P 
Sbjct: 373 CRELPK 378


>gi|218550088|ref|YP_002383879.1| diaminopimelate decarboxylase [Escherichia fergusonii ATCC 35469]
 gi|218357629|emb|CAQ90268.1| diaminopimelate decarboxylase, PLP-binding [Escherichia fergusonii
           ATCC 35469]
          Length = 420

 Score =  199 bits (505), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 56/398 (14%), Positives = 114/398 (28%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D    A +S     +   +V  L +    +     ++
Sbjct: 82  RALAAGYDPLTSPDDIVFTADVIDSATLARVSELRIPVNAGSVDMLEQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G    D       I      + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHTDLPAALAVIARYELKLVGIHMHIGSGVDYA 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                    + +    F  ++E IS GGG+             + Y       R +    
Sbjct: 200 HLEQVCGAMVSQVI-EFGQELEAISAGGGLSIPYRDGEEAVDTEHYFGLWNAAREQIAHH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATI 281
             + V++ +EPG  +V  +  L   V  +     ++ V++D+     +   +        
Sbjct: 259 LGHRVKLEIEPGRFLVAQSGVLIAQVRSVKQMGRRHFVLIDAGFNDLMRPAMYGSYHRIT 318

Query: 282 YPNTGPYTAM--------VCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                  +          V G  C +GD+F        E      V  GD +   D   Y
Sbjct: 319 ALAADGRSFDNTPVVETVVAGPLCESGDVFTQQEGGTVETRELPQVAPGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    + +        R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 416


>gi|194433017|ref|ZP_03065300.1| diaminopimelate decarboxylase [Shigella dysenteriae 1012]
 gi|194418744|gb|EDX34830.1| diaminopimelate decarboxylase [Shigella dysenteriae 1012]
 gi|332088589|gb|EGI93702.1| diaminopimelate decarboxylase [Shigella dysenteriae 155-74]
          Length = 420

 Score =  199 bits (505), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 57/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAALKQFEV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D      +S     +   +V  L++    +     ++
Sbjct: 82  RALAAGYNPQTHPDDIVFTADVIDQATLERVSELKIPVNAGSVDMLDQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G          D I+     + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                    + +    F   ++ IS GGG+             + Y       R +    
Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     +      +V G  C +GD+F        E      VK GD +   D   Y
Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
             +  + +N   +    + +        R  + 
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411


>gi|153853278|ref|ZP_01994687.1| hypothetical protein DORLON_00673 [Dorea longicatena DSM 13814]
 gi|149754064|gb|EDM63995.1| hypothetical protein DORLON_00673 [Dorea longicatena DSM 13814]
          Length = 424

 Score =  198 bits (504), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 61/391 (15%), Positives = 124/391 (31%), Gaps = 29/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +  N+         N G +   A+K      + + L +Y  G   SS  
Sbjct: 20  PTPFHLYDEKGMRENMKALKEAFSWNKGYREYFAVKATPNPFLINILREYGCGCDCSSYT 79

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+ML       GE   ++       E          I  + ++ ++  +     + + I 
Sbjct: 80  ELMLSDAIGATGEDIMFSSNDTPAEEFVLADKLNAIINLDDITHIDFLEKAIGHIPETIS 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN---- 169
            R NP   +        N   ++ G   +        ++++     G+            
Sbjct: 140 CRYNPGGMFKISNDIMDNPGDAKYGMTTEQLFEAFKILKAKGAKEFGIHAFLASNTVTNE 199

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
              +    + +   K        I++I+L GG+    K     +  + + +   +   + 
Sbjct: 200 YYPMLAKVLFEVAVKLQKETGVHIKFINLSGGVGIPYKPDQEPNDIRAIGDGVRRVYEEV 259

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     IY E G  ++     L TT +      K  + VD+     +   +     
Sbjct: 260 LVPAGMGDVAIYTEMGRFMMGPYGCLVTTAIHEKHTHKEYIGVDACAVNLMRPAMYGAYH 319

Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        + +GD +   D   +  +    +
Sbjct: 320 HITVMGKEDTPCDHKYDVTGSLCENNDKFAIDRMLPKIDMGDILVIHDTGAHGFSMGYNY 379

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   DG+ + IR   +  DY+ 
Sbjct: 380 NGKLKSAEVLLKEDGSTQLIRRAETPADYFA 410


>gi|291557977|emb|CBL35094.1| Diaminopimelate decarboxylase [Eubacterium siraeum V10Sc8a]
          Length = 423

 Score =  198 bits (504), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 55/393 (13%), Positives = 113/393 (28%), Gaps = 30/393 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           I TP+++ D++ +             N G +   A+K      + + L +   G   SS 
Sbjct: 19  IPTPFHIYDEKGIRETARKLYDAFSWNKGFREYFAVKATPNPYLMEILKEEGCGFDCSSY 78

Query: 61  YEVMLGHEKFGG--ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-K 117
            E+ML  +      +    + A  D +          I  +  + ++             
Sbjct: 79  TELMLSDKVGAKQHDIMFSSNATPDEDFKLAYKLGAIINLDDFTHIDVLDKLTGIPETIC 138

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCENKS 171
                      S+          ++ G   +  IE+            G+         +
Sbjct: 139 CRYNPGGEFKTSEKGNVMDTPKDAKYGMTHEQIIEAYKILKEKGAKRFGMHAFLASNTLT 198

Query: 172 FLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
              +      + +   +       Q+ +I+L GG+    K     +  + + E   K   
Sbjct: 199 NEYYPVLAGILFRTAVEIKEKTGVQLSFINLSGGVGVPYKPDQPANDIKVIGEGVRKAYE 258

Query: 228 QI-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ 276
           +I           + E G  ++     L    +      K  + +D+     +   +   
Sbjct: 259 EILVPAGMGDVAIFTELGRYMLAPNGALVAKAIREKHIYKEYIGLDACAANLMRPAIYGA 318

Query: 277 ESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                          +   + G  C   D F        + IGD I   D   +  +   
Sbjct: 319 YHHITVMGKENQPCDHKYDITGGLCENCDKFAVDRMLPKIDIGDIIYIHDTGAHGFSMGY 378

Query: 333 WFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
            +NG       +   DG+ K IR   +  DY+ 
Sbjct: 379 NYNGKLRSAEVLLKEDGSFKLIRRAETPEDYFA 411


>gi|157150578|ref|YP_001450955.1| diaminopimelate decarboxylase [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|157075372|gb|ABV10055.1| diaminopimelate decarboxylase [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 416

 Score =  198 bits (504), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 58/392 (14%), Positives = 120/392 (30%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   +S  
Sbjct: 19  PTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGCGVDCASYV 78

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++  +  F G+   ++       E         TI  +    +   K+ A        
Sbjct: 79  ELLMSQKLGFAGQDIMFSSNNTPAEEFQFARDLGATINLDAYEDVAFLKEVAGIPKVISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMF----HNNCEN 169
                 V      + D     ++ G      I++  +         G+      +    N
Sbjct: 139 RYNPGGVFELGTSIMDNP-EEAKFGMTKDQLIQAFKELKELGAEKFGIHALLASNTVSNN 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227
                   + +   +       ++++I+L GG+    +    ++    + +   +     
Sbjct: 198 YYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPEGEENDIAVIGQGVRQAYEAI 257

Query: 228 ---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                    +IY E G  ++     L T V    +  +  + VD+S    +   +     
Sbjct: 258 LTPAGLGKVKIYTELGRFMLAPYGLLVTKVTHKKQTYRTYLGVDASAVNLLRPAMYGSYH 317

Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                +        A V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HITNMDRPEGETEIADVVGSLCENNDKFAINRPLPISEIGDTLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                +  +   DG ++ IR      DY+  L
Sbjct: 378 AKLRSSEILLEEDGNVRMIRRAERPEDYFATL 409


>gi|325690948|gb|EGD32948.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK115]
          Length = 416

 Score =  198 bits (504), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 58/392 (14%), Positives = 119/392 (30%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   +S  
Sbjct: 19  PTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGCGVDCASYV 78

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++G +  F G    ++       E         TI  +    +   K+ A        
Sbjct: 79  ELLMGQKLGFAGRDIMFSSNNTPAEEFQFARDLGATINLDAYEDVAFLKEAAGIPKVISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMF----HNNCEN 169
                 V      + D     ++ G      I++  +         G+      +    +
Sbjct: 139 RYNPGGVFELGTSIMDNP-EEAKFGMTKDQLIQAFKELKELGAEKFGIHALLASNTVSND 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227
                   + +   +       ++++I+L GG+    +    ++    + +   +     
Sbjct: 198 YYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPEGEENDIAVIGQGVRQAYEAI 257

Query: 228 ---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                    +IY E G  ++     L T V    +  +  + VD+S    +   +     
Sbjct: 258 LTPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKQTYRTYLGVDASAVNLLRPAMYGSYH 317

Query: 279 A---TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                  P        V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HITNMDRPMGETEIVDVVGSLCENNDKFAINRPLPVSQIGDTLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                +  +   DG ++ IR      DY+  L
Sbjct: 378 AKLRSSEILLEQDGNVRMIRRAEKPEDYFATL 409


>gi|322517488|ref|ZP_08070361.1| diaminopimelate decarboxylase [Streptococcus vestibularis ATCC
           49124]
 gi|322123970|gb|EFX95529.1| diaminopimelate decarboxylase [Streptococcus vestibularis ATCC
           49124]
          Length = 421

 Score =  198 bits (504), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 64/393 (16%), Positives = 121/393 (30%), Gaps = 31/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   ++  
Sbjct: 24  PTPFHLYDEKGIRETARAVNAAFSWNPGFKEFFAVKATPNPAILKILKEEGCGVDCATDT 83

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKI 118
           E+++ ++  F     ++     D   +  +   D      +           A  L + +
Sbjct: 84  ELVMSNKIGFDSTAISFTSN--DTRAEEFVYARDINATINLDAYEDIFFLEEAAGLPETL 141

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKI----ESEIKNVNGLMFH------NNCE 168
            LR NP   +S       +   S+ G   +         + K V     H          
Sbjct: 142 SLRFNPGGVFSLGTDIMDHPEESKFGMTKEQLFKGYAYLKEKGVKSFGLHAFLASNTVTN 201

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
                  + + +   +        +++I+L GG+         ++    + E       +
Sbjct: 202 EYYPTLAAQLFELAVEIKNELGVSLDFINLSGGVGVDYTPANKQNDIAVIGEGVHTKFDE 261

Query: 229 I-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
           I           Y E G  +      + T VL I +  +  V VD+S    +   +    
Sbjct: 262 ILVPNDLGDISIYTELGRFMTAPHGLVVTKVLHIKDTYRRYVGVDASAVNLLRPAMYDAY 321

Query: 278 SATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                            V G  C   D F +       +IGD +   D   +  +    +
Sbjct: 322 HHITNMTNPNGDIQVVDVTGSLCENNDKFAKNRELPEARIGDTLVIHDTGAHGFSMGYNY 381

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       +   DGT + IR   + NDY+  L
Sbjct: 382 NGRLRSAEILYQEDGTARMIRRAETMNDYFATL 414


>gi|261839146|gb|ACX98911.1| diaminopimelate decarboxylase [Helicobacter pylori 52]
          Length = 405

 Score =  198 bits (504), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 70/385 (18%), Positives = 123/385 (31%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP+YL D  K+           K     +  ALK  +   +   L     G    S+ E
Sbjct: 12  KTPFYLYDFGKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLASLESGADCVSIGE 71

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +              ++   K        +  N   +   +  +L   +  AQ L  K  
Sbjct: 72  IHRALKAGIKPYRIVFSGVGKSESEIEQALKLNILFLNVESFMELTTIETIAQSLGIKAR 131

Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           +  RINP++              ++ G   K+ +E       S       + FH   +  
Sbjct: 132 ISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPISVHFHIGSQLL 191

Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224
                      +  I K        + +  +GGGI  + ++       D+ QR+    + 
Sbjct: 192 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQRILNALQG 251

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             + I  EPG +IV  +  L T VL       K  VIVD+ +   +   L + + A    
Sbjct: 252 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVI 311

Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                       V G  C + D F +      ++ GD++  E V  Y  +  + +N    
Sbjct: 312 TPYKGRKISPCDVVGPVCESSDTFLKGVHLPELEPGDKLVIEKVGAYGSSMASQYNSRPK 371

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
                          +  +  D + 
Sbjct: 372 LLELALEDHQIRVIRKREALEDLWR 396


>gi|282853784|ref|ZP_06263121.1| diaminopimelate decarboxylase [Propionibacterium acnes J139]
 gi|282583237|gb|EFB88617.1| diaminopimelate decarboxylase [Propionibacterium acnes J139]
 gi|314981443|gb|EFT25537.1| diaminopimelate decarboxylase [Propionibacterium acnes HL110PA3]
 gi|315092108|gb|EFT64084.1| diaminopimelate decarboxylase [Propionibacterium acnes HL110PA4]
          Length = 476

 Score =  198 bits (504), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 66/403 (16%), Positives = 129/403 (32%), Gaps = 43/403 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y++D+  L                 +  A K F    +   ++Q      + +  E
Sbjct: 63  GSPLYVLDESDLRQRARAFRDAFSEWD--VYYAGKAFLTRTIASWIDQEGLFLDTCTGGE 120

Query: 63  VMLGHEK-FGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117
           ++   +          +   K  D    A+      II +++ ++ + +   ++   H +
Sbjct: 121 LITALQGGMDPARIGLHGNNKSIDELKLALSVGVGRIIVDSLDEIMRIEQLCRENGWHAR 180

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G                 S+  ++ G+  H   +
Sbjct: 181 VMVRVTAGVEAHTHEYIATAHEDQKFGFSITNGAAMVAMVRCHTSDAIDLLGVHSHIGSQ 240

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F       +K +E+      + +  + LGGG              + L     +
Sbjct: 241 IFDTAGFEVAARRTMKLLEQFHQATGSALPELDLGGGFGIAYTSQDSPATVESLAGALRE 300

Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDSSVEA 267
                          I LEPG AIV  TT    TV  +          +  V VD  +  
Sbjct: 301 IVTVEARGRGMEVPHISLEPGRAIVGPTTMALYTVGTVKPVDLDTGAQRMYVSVDGGMSD 360

Query: 268 HVPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFED 322
           ++   L   E + +  N      P    + G+ C AGDI     +    V  GD I+   
Sbjct: 361 NIRPALYAAEYSAVIANRTSEVAPVLCRIVGKHCEAGDILVRDVYLPGDVSPGDVIAVPG 420

Query: 323 VAGYNINRKNWFNGINMPTIAVKNVD-GTIKAIREFSYNDYYN 364
              Y+ +  + +N +  P +   N D G +  +R  + +D   
Sbjct: 421 AGAYSRSMASNYNHVPRPAVVSVNEDRGVLVLLRRENIDDLLA 463


>gi|50842737|ref|YP_055964.1| diaminopimelate decarboxylase [Propionibacterium acnes KPA171202]
 gi|289425258|ref|ZP_06427035.1| diaminopimelate decarboxylase [Propionibacterium acnes SK187]
 gi|289428558|ref|ZP_06430242.1| diaminopimelate decarboxylase [Propionibacterium acnes J165]
 gi|295130818|ref|YP_003581481.1| diaminopimelate decarboxylase [Propionibacterium acnes SK137]
 gi|50840339|gb|AAT83006.1| diaminopimelate decarboxylase [Propionibacterium acnes KPA171202]
 gi|289154236|gb|EFD02924.1| diaminopimelate decarboxylase [Propionibacterium acnes SK187]
 gi|289158252|gb|EFD06471.1| diaminopimelate decarboxylase [Propionibacterium acnes J165]
 gi|291375992|gb|ADD99846.1| diaminopimelate decarboxylase [Propionibacterium acnes SK137]
 gi|313764209|gb|EFS35573.1| diaminopimelate decarboxylase [Propionibacterium acnes HL013PA1]
 gi|313772070|gb|EFS38036.1| diaminopimelate decarboxylase [Propionibacterium acnes HL074PA1]
 gi|313801617|gb|EFS42857.1| diaminopimelate decarboxylase [Propionibacterium acnes HL110PA2]
 gi|313807761|gb|EFS46248.1| diaminopimelate decarboxylase [Propionibacterium acnes HL087PA2]
 gi|313810269|gb|EFS47990.1| diaminopimelate decarboxylase [Propionibacterium acnes HL083PA1]
 gi|313812703|gb|EFS50417.1| diaminopimelate decarboxylase [Propionibacterium acnes HL025PA1]
 gi|313816302|gb|EFS54016.1| diaminopimelate decarboxylase [Propionibacterium acnes HL059PA1]
 gi|313818797|gb|EFS56511.1| diaminopimelate decarboxylase [Propionibacterium acnes HL046PA2]
 gi|313820570|gb|EFS58284.1| diaminopimelate decarboxylase [Propionibacterium acnes HL036PA1]
 gi|313822625|gb|EFS60339.1| diaminopimelate decarboxylase [Propionibacterium acnes HL036PA2]
 gi|313825441|gb|EFS63155.1| diaminopimelate decarboxylase [Propionibacterium acnes HL063PA1]
 gi|313827405|gb|EFS65119.1| diaminopimelate decarboxylase [Propionibacterium acnes HL063PA2]
 gi|313830599|gb|EFS68313.1| diaminopimelate decarboxylase [Propionibacterium acnes HL007PA1]
 gi|313833636|gb|EFS71350.1| diaminopimelate decarboxylase [Propionibacterium acnes HL056PA1]
 gi|313838330|gb|EFS76044.1| diaminopimelate decarboxylase [Propionibacterium acnes HL086PA1]
 gi|314915687|gb|EFS79518.1| diaminopimelate decarboxylase [Propionibacterium acnes HL005PA4]
 gi|314917946|gb|EFS81777.1| diaminopimelate decarboxylase [Propionibacterium acnes HL050PA1]
 gi|314920327|gb|EFS84158.1| diaminopimelate decarboxylase [Propionibacterium acnes HL050PA3]
 gi|314924934|gb|EFS88765.1| diaminopimelate decarboxylase [Propionibacterium acnes HL036PA3]
 gi|314931547|gb|EFS95378.1| diaminopimelate decarboxylase [Propionibacterium acnes HL067PA1]
 gi|314955477|gb|EFS99882.1| diaminopimelate decarboxylase [Propionibacterium acnes HL027PA1]
 gi|314957932|gb|EFT02035.1| diaminopimelate decarboxylase [Propionibacterium acnes HL002PA1]
 gi|314960541|gb|EFT04643.1| diaminopimelate decarboxylase [Propionibacterium acnes HL002PA2]
 gi|314962556|gb|EFT06656.1| diaminopimelate decarboxylase [Propionibacterium acnes HL082PA1]
 gi|314967580|gb|EFT11679.1| diaminopimelate decarboxylase [Propionibacterium acnes HL037PA1]
 gi|314973601|gb|EFT17697.1| diaminopimelate decarboxylase [Propionibacterium acnes HL053PA1]
 gi|314975823|gb|EFT19918.1| diaminopimelate decarboxylase [Propionibacterium acnes HL045PA1]
 gi|314978712|gb|EFT22806.1| diaminopimelate decarboxylase [Propionibacterium acnes HL072PA2]
 gi|314983699|gb|EFT27791.1| diaminopimelate decarboxylase [Propionibacterium acnes HL005PA1]
 gi|314987879|gb|EFT31970.1| diaminopimelate decarboxylase [Propionibacterium acnes HL005PA2]
 gi|314989690|gb|EFT33781.1| diaminopimelate decarboxylase [Propionibacterium acnes HL005PA3]
 gi|315077770|gb|EFT49821.1| diaminopimelate decarboxylase [Propionibacterium acnes HL053PA2]
 gi|315080397|gb|EFT52373.1| diaminopimelate decarboxylase [Propionibacterium acnes HL078PA1]
 gi|315085411|gb|EFT57387.1| diaminopimelate decarboxylase [Propionibacterium acnes HL002PA3]
 gi|315088531|gb|EFT60507.1| diaminopimelate decarboxylase [Propionibacterium acnes HL072PA1]
 gi|315095874|gb|EFT67850.1| diaminopimelate decarboxylase [Propionibacterium acnes HL038PA1]
 gi|315098778|gb|EFT70754.1| diaminopimelate decarboxylase [Propionibacterium acnes HL059PA2]
 gi|315101451|gb|EFT73427.1| diaminopimelate decarboxylase [Propionibacterium acnes HL046PA1]
 gi|315105824|gb|EFT77800.1| diaminopimelate decarboxylase [Propionibacterium acnes HL030PA1]
 gi|315108743|gb|EFT80719.1| diaminopimelate decarboxylase [Propionibacterium acnes HL030PA2]
 gi|327326425|gb|EGE68215.1| diaminopimelate decarboxylase [Propionibacterium acnes HL096PA2]
 gi|327329881|gb|EGE71635.1| diaminopimelate decarboxylase [Propionibacterium acnes HL097PA1]
 gi|327331700|gb|EGE73437.1| diaminopimelate decarboxylase [Propionibacterium acnes HL096PA3]
 gi|327443476|gb|EGE90130.1| diaminopimelate decarboxylase [Propionibacterium acnes HL013PA2]
 gi|327445679|gb|EGE92333.1| diaminopimelate decarboxylase [Propionibacterium acnes HL043PA2]
 gi|327448337|gb|EGE94991.1| diaminopimelate decarboxylase [Propionibacterium acnes HL043PA1]
 gi|327450538|gb|EGE97192.1| diaminopimelate decarboxylase [Propionibacterium acnes HL087PA3]
 gi|327454123|gb|EGF00778.1| diaminopimelate decarboxylase [Propionibacterium acnes HL083PA2]
 gi|328753206|gb|EGF66822.1| diaminopimelate decarboxylase [Propionibacterium acnes HL025PA2]
 gi|328753953|gb|EGF67569.1| diaminopimelate decarboxylase [Propionibacterium acnes HL087PA1]
 gi|328754688|gb|EGF68304.1| diaminopimelate decarboxylase [Propionibacterium acnes HL020PA1]
 gi|328760884|gb|EGF74449.1| diaminopimelate decarboxylase [Propionibacterium acnes HL099PA1]
 gi|332675662|gb|AEE72478.1| diaminopimelate decarboxylase [Propionibacterium acnes 266]
          Length = 476

 Score =  198 bits (504), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 66/403 (16%), Positives = 129/403 (32%), Gaps = 43/403 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y++D+  L                 +  A K F    +   ++Q      + +  E
Sbjct: 63  GSPLYVLDESDLRQRARAFRDAFSEWD--VYYAGKAFLTRTIASWIDQEGLFLDTCTGGE 120

Query: 63  VMLGHEK-FGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117
           ++   +          +   K  D    A+      II +++ ++ + +   ++   H +
Sbjct: 121 LITALQGGMDPARIGLHGNNKSIDELKLALSVGVGRIIVDSLDEIMRIEQLCRENGWHAR 180

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G                 S+  ++ G+  H   +
Sbjct: 181 VMVRVTAGVEAHTHEYIATAHEDQKFGFSITNGAAMVAMVRCHTSDAIDLLGVHSHIGSQ 240

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F       +K +E+      + +  + LGGG              + L     +
Sbjct: 241 IFDTAGFEVAARRTMKLLEQFHQATGSALPELDLGGGFGIAYTSQDSPATVESLAGALRE 300

Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDSSVEA 267
                          I LEPG AIV  TT    TV  +          +  V VD  +  
Sbjct: 301 IVTLEARGRGMEVPHISLEPGRAIVGPTTMALYTVGTVKPVDLDTGAQRMYVSVDGGMSD 360

Query: 268 HVPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFED 322
           ++   L   E + +  N      P    + G+ C AGDI     +    V  GD I+   
Sbjct: 361 NIRPALYAAEYSAVIANRTSEVAPVLCRIVGKHCEAGDILVRDVYLPGDVSPGDVIAVPG 420

Query: 323 VAGYNINRKNWFNGINMPTIAVKNVD-GTIKAIREFSYNDYYN 364
              Y+ +  + +N +  P +   N D G +  +R  + +D   
Sbjct: 421 AGAYSRSMASNYNHVPRPAVVSVNEDRGVLVLLRRENIDDLLA 463


>gi|170765517|ref|ZP_02900328.1| diaminopimelate decarboxylase [Escherichia albertii TW07627]
 gi|170124663|gb|EDS93594.1| diaminopimelate decarboxylase [Escherichia albertii TW07627]
          Length = 420

 Score =  198 bits (504), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 56/398 (14%), Positives = 116/398 (29%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAVLKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D      +S     +   ++  L++    +     ++
Sbjct: 82  RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSIDMLDQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G          + I+     + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALEVIQRHHLQLVGIHMHIGSGVDYA 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                    + +    F   ++ IS GGG+             K Y       R +    
Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSIPYQQGEEAVDTKHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V++ +EPG  +V  +  L T V  +     +  V+VD+     +   +        
Sbjct: 259 LGHHVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRRFVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                            +V G  C +GD+F        E      VK GD +   D   Y
Sbjct: 319 ALAADGRSLEYAPTVETVVAGPLCESGDVFTQQEGGKVETRALPEVKAGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    + +        R  + ++   
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTISELLA 416


>gi|313791900|gb|EFS40001.1| diaminopimelate decarboxylase [Propionibacterium acnes HL110PA1]
 gi|327453381|gb|EGF00036.1| diaminopimelate decarboxylase [Propionibacterium acnes HL092PA1]
          Length = 476

 Score =  198 bits (504), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 66/403 (16%), Positives = 129/403 (32%), Gaps = 43/403 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y++D+  L                 +  A K F    +   ++Q      + +  E
Sbjct: 63  GSPLYVLDESDLRQRARAFRDAFSEWD--VYYAGKAFLTRTIASWIDQEGLFLDTCTGGE 120

Query: 63  VMLGHEK-FGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117
           ++   +          +   K  D    A+      II +++ ++ + +   ++   H +
Sbjct: 121 LITALQGGMDPSRIGLHGNNKSIDELKLALSVGVGRIIVDSLDEIMRIEQLCRENGWHAR 180

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G                 S+  ++ G+  H   +
Sbjct: 181 VMVRVTAGVEAHTHEYIATAHEDQKFGFSITNGAAMVAMVRCHTSDAIDLLGVHSHIGSQ 240

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F       +K +E+      + +  + LGGG              + L     +
Sbjct: 241 IFDTAGFEVAARRTMKLLEQFHQATGSALPELDLGGGFGIAYTSQDSPATVESLAGALRE 300

Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDSSVEA 267
                          I LEPG AIV  TT    TV  +          +  V VD  +  
Sbjct: 301 IVTLEARGRGMEVPHISLEPGRAIVGPTTMALYTVGTVKPVDLDTGAQRMYVSVDGGMSD 360

Query: 268 HVPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFED 322
           ++   L   E + +  N      P    + G+ C AGDI     +    V  GD I+   
Sbjct: 361 NIRPALYAAEYSAVIANRTSEVAPVLCRIVGKHCEAGDILVRDVYLPGDVSPGDVIAVPG 420

Query: 323 VAGYNINRKNWFNGINMPTIAVKNVD-GTIKAIREFSYNDYYN 364
              Y+ +  + +N +  P +   N D G +  +R  + +D   
Sbjct: 421 AGAYSRSMASNYNHVPRPAVVSVNEDRGVLVLLRRENIDDLLA 463


>gi|56751260|ref|YP_171961.1| diaminopimelate decarboxylase [Synechococcus elongatus PCC 6301]
 gi|81299073|ref|YP_399281.1| diaminopimelate decarboxylase [Synechococcus elongatus PCC 7942]
 gi|56686219|dbj|BAD79441.1| diaminopimelate decarboxylase [Synechococcus elongatus PCC 6301]
 gi|81167954|gb|ABB56294.1| diaminopimelate decarboxylase [Synechococcus elongatus PCC 7942]
          Length = 464

 Score =  198 bits (504), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 51/396 (12%), Positives = 110/396 (27%), Gaps = 34/396 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P Y++D+Q L     +      +        + A K +    +   + Q   G    S
Sbjct: 59  GSPLYILDEQTLRAACQSYRSALAHHYPGAALPIYASKAWNCLAVCALVAQEGLGIDVVS 118

Query: 60  LYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKK 117
             E+          +   ++   K     A+       I+ +   +L   +  A +  ++
Sbjct: 119 AGELYTALQAGVPSDRLYFHGNNKSLSELAMGVEAGCTIVVDNWQELRNLEAIAAEQQRE 178

Query: 118 IGLRIN--PSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCE 168
           + + I   P +              S+ G             ++       GL  H   +
Sbjct: 179 VRVMIRFTPGIECHTHEYIRTGHLDSKFGFDPDQLDALLAALVDQPYLRCIGLHAHIGSQ 238

Query: 169 NKSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
                  + +   +   +         I  +++GGG+     +               + 
Sbjct: 239 IFELQPHADLAGVLVGAYAKALALGLPIAELNVGGGLGIRYTESDDPPSIDEWVRQVSES 298

Query: 226 S-----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDY 272
                        ++  EPG +++         +    E         VD  +  +    
Sbjct: 299 LVAACQAADLPLPKLICEPGRSLIGTACVTAYQIGSRKEVPGIRTYLAVDGGMSDNPRPI 358

Query: 273 LLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
                     A     +   T  V G+ C +GD+  +     P + GD +       YN 
Sbjct: 359 TYQSTYRAVIANRLNVSDRETVTVAGKHCESGDVLLKDAELAPSQPGDILVVLATGAYNY 418

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +  + +N I  P   + N       +   S  D   
Sbjct: 419 SMASNYNRIARPAAVLVNNGEAQIILARESLQDLLR 454


>gi|331674321|ref|ZP_08375081.1| diaminopimelate decarboxylase [Escherichia coli TA280]
 gi|331068415|gb|EGI39810.1| diaminopimelate decarboxylase [Escherichia coli TA280]
          Length = 420

 Score =  198 bits (504), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 57/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D      +S     +   +V  L++    +     ++
Sbjct: 82  RALAAGYNPQSHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G          D I+     + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                    + +    F   ++ IS GGG+             + Y       R +    
Sbjct: 200 HLEQVCGAMVRQVL-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     +      +V G  C +GD+F        E      VK GD +   D   Y
Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
             +  + +N   +    + +        R  + 
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411


>gi|170683211|ref|YP_001745007.1| diaminopimelate decarboxylase [Escherichia coli SMS-3-5]
 gi|170520929|gb|ACB19107.1| diaminopimelate decarboxylase [Escherichia coli SMS-3-5]
          Length = 420

 Score =  198 bits (504), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 57/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D      +S     +   +V  L++    +     ++
Sbjct: 82  RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G          D I+     + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                    + +    F   ++ IS GGG+             + Y       R +    
Sbjct: 200 HLEQVCGAMVRQVL-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     +      +V G  C +GD+F        E      VK GD +   D   Y
Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
             +  + +N   +    + +        R  + 
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411


>gi|159903637|ref|YP_001550981.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT
           9211]
 gi|159888813|gb|ABX09027.1| Diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT
           9211]
          Length = 455

 Score =  198 bits (504), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 53/396 (13%), Positives = 114/396 (28%), Gaps = 34/396 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP Y+ID+  + ++        K +      +L A K  ++  +   +     G    S
Sbjct: 48  GTPLYVIDEASIRSSCRAYRKALKQSYPGDSFVLYASKANSSLAIDRIVASEGLGIDVVS 107

Query: 60  LYEVMLGHE-KFGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             E++   +    GE    +     D E+     +  TII +    + +           
Sbjct: 108 EGELITALKSGVAGEQIVLHGNNKSDKELLLAHESNATIIIDNQHDIQRLDKLISHKEGS 167

Query: 118 IGLRIN--PSVSYSKFILADPNRPFSRLG-------EKCKDKIESEIKNVNGLMFHNNCE 168
           + L +   P +              S+ G       +      + +   + GL  H   +
Sbjct: 168 VRLMLRFTPGIECHTHEYIRTGHLDSKFGFDPEQVSDTFAQLKDYKWAKLVGLHAHIGSQ 227

Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC---------Q 216
                    +++ +   F         I+ +++GGG+                       
Sbjct: 228 IFELSPHMDLVEVMADFFLRAKDLGHPIKDLNIGGGLGVKYIPSDDPPDIYSWVETVSNA 287

Query: 217 RLKEFSEKYS--VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDY 272
            +K F  +     ++  EPG +I+         +    +    K  + +D  +  +    
Sbjct: 288 VIKAFDTRNIELPRLICEPGRSIIATAGLTLYRIGARKDIPGGKTYLSIDGGMSDNPRPI 347

Query: 273 LLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
                      +           + G+ C +GDI            GD +       YN+
Sbjct: 348 TYQSTYTACLVDRPLANTDQVVTIAGKHCESGDILLNNIALPTASSGDVLGVFGTGAYNL 407

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +  + +N I  P   + N   +          D   
Sbjct: 408 SMSSNYNRIPRPASVLVNNAQSDLVQVRELPEDLLR 443


>gi|293412184|ref|ZP_06654907.1| diaminopimelate decarboxylase [Escherichia coli B354]
 gi|291468955|gb|EFF11446.1| diaminopimelate decarboxylase [Escherichia coli B354]
          Length = 420

 Score =  198 bits (504), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 57/393 (14%), Positives = 115/393 (29%), Gaps = 46/393 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D      +S     +   +V  L++    +     ++
Sbjct: 82  RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G          D I+     + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                    + +    F   ++ IS GGG+             + Y       R +    
Sbjct: 200 HLEQVCGAMVRQVL-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V++ +EPG  +V     L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVKLEIEPGRFLVAQAGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     +      +V G  C +GD+F        E      VK GD +   D   Y
Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
             +  + +N   +    + +        R  + 
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411


>gi|110643006|ref|YP_670736.1| diaminopimelate decarboxylase [Escherichia coli 536]
 gi|218690964|ref|YP_002399176.1| diaminopimelate decarboxylase [Escherichia coli ED1a]
 gi|218701553|ref|YP_002409182.1| diaminopimelate decarboxylase [Escherichia coli IAI39]
 gi|218706332|ref|YP_002413851.1| diaminopimelate decarboxylase [Escherichia coli UMN026]
 gi|293406327|ref|ZP_06650253.1| diaminopimelate decarboxylase [Escherichia coli FVEC1412]
 gi|298382063|ref|ZP_06991660.1| diaminopimelate decarboxylase [Escherichia coli FVEC1302]
 gi|300898100|ref|ZP_07116466.1| diaminopimelate decarboxylase [Escherichia coli MS 198-1]
 gi|301027487|ref|ZP_07190824.1| diaminopimelate decarboxylase [Escherichia coli MS 69-1]
 gi|306812257|ref|ZP_07446455.1| diaminopimelate decarboxylase [Escherichia coli NC101]
 gi|331648599|ref|ZP_08349687.1| diaminopimelate decarboxylase [Escherichia coli M605]
 gi|331658986|ref|ZP_08359928.1| diaminopimelate decarboxylase [Escherichia coli TA206]
 gi|331664401|ref|ZP_08365307.1| diaminopimelate decarboxylase [Escherichia coli TA143]
 gi|331684482|ref|ZP_08385074.1| diaminopimelate decarboxylase [Escherichia coli H299]
 gi|110344598|gb|ABG70835.1| diaminopimelate decarboxylase [Escherichia coli 536]
 gi|218371539|emb|CAR19377.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli IAI39]
 gi|218428528|emb|CAR09455.2| diaminopimelate decarboxylase, PLP-binding [Escherichia coli ED1a]
 gi|218433429|emb|CAR14331.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli
           UMN026]
 gi|222034553|emb|CAP77295.1| Diaminopimelate decarboxylase [Escherichia coli LF82]
 gi|281179863|dbj|BAI56193.1| diaminopimelate decarboxylase [Escherichia coli SE15]
 gi|284922775|emb|CBG35863.1| diaminopimelate decarboxylase [Escherichia coli 042]
 gi|291426333|gb|EFE99365.1| diaminopimelate decarboxylase [Escherichia coli FVEC1412]
 gi|298277203|gb|EFI18719.1| diaminopimelate decarboxylase [Escherichia coli FVEC1302]
 gi|300358158|gb|EFJ74028.1| diaminopimelate decarboxylase [Escherichia coli MS 198-1]
 gi|300394995|gb|EFJ78533.1| diaminopimelate decarboxylase [Escherichia coli MS 69-1]
 gi|305854295|gb|EFM54733.1| diaminopimelate decarboxylase [Escherichia coli NC101]
 gi|312947390|gb|ADR28217.1| diaminopimelate decarboxylase [Escherichia coli O83:H1 str. NRG
           857C]
 gi|315295748|gb|EFU55065.1| diaminopimelate decarboxylase [Escherichia coli MS 16-3]
 gi|330908891|gb|EGH37405.1| diaminopimelate decarboxylase [Escherichia coli AA86]
 gi|331042346|gb|EGI14488.1| diaminopimelate decarboxylase [Escherichia coli M605]
 gi|331053568|gb|EGI25597.1| diaminopimelate decarboxylase [Escherichia coli TA206]
 gi|331058332|gb|EGI30313.1| diaminopimelate decarboxylase [Escherichia coli TA143]
 gi|331078097|gb|EGI49303.1| diaminopimelate decarboxylase [Escherichia coli H299]
          Length = 420

 Score =  198 bits (504), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 57/393 (14%), Positives = 115/393 (29%), Gaps = 46/393 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D      +S     +   +V  L++    +     ++
Sbjct: 82  RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G          D I+     + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                    + +    F   ++ IS GGG+             + Y       R +    
Sbjct: 200 HLEQVCGAMVRQVL-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V++ +EPG  +V     L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVKLEIEPGRFLVAQAGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     +      +V G  C +GD+F        E      VK GD +   D   Y
Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
             +  + +N   +    + +        R  + 
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411


>gi|26249270|ref|NP_755310.1| diaminopimelate decarboxylase [Escherichia coli CFT073]
 gi|215488157|ref|YP_002330588.1| diaminopimelate decarboxylase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|227888404|ref|ZP_04006209.1| diaminopimelate decarboxylase [Escherichia coli 83972]
 gi|300980450|ref|ZP_07175005.1| diaminopimelate decarboxylase [Escherichia coli MS 45-1]
 gi|301049368|ref|ZP_07196332.1| diaminopimelate decarboxylase [Escherichia coli MS 185-1]
 gi|312964885|ref|ZP_07779125.1| diaminopimelate decarboxylase [Escherichia coli 2362-75]
 gi|26109677|gb|AAN81880.1|AE016765_282 Diaminopimelate decarboxylase [Escherichia coli CFT073]
 gi|215266229|emb|CAS10656.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli
           O127:H6 str. E2348/69]
 gi|227834673|gb|EEJ45139.1| diaminopimelate decarboxylase [Escherichia coli 83972]
 gi|300298810|gb|EFJ55195.1| diaminopimelate decarboxylase [Escherichia coli MS 185-1]
 gi|300409257|gb|EFJ92795.1| diaminopimelate decarboxylase [Escherichia coli MS 45-1]
 gi|307554833|gb|ADN47608.1| diaminopimelate decarboxylase [Escherichia coli ABU 83972]
 gi|312290441|gb|EFR18321.1| diaminopimelate decarboxylase [Escherichia coli 2362-75]
 gi|315293830|gb|EFU53182.1| diaminopimelate decarboxylase [Escherichia coli MS 153-1]
 gi|320194974|gb|EFW69603.1| Diaminopimelate decarboxylase [Escherichia coli WV_060327]
 gi|324005608|gb|EGB74827.1| diaminopimelate decarboxylase [Escherichia coli MS 57-2]
          Length = 420

 Score =  198 bits (504), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 57/393 (14%), Positives = 115/393 (29%), Gaps = 46/393 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D      +S     +   +V  L++    +     ++
Sbjct: 82  RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G          D I+     + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                    + +    F   ++ IS GGG+             + Y       R +    
Sbjct: 200 HLEQVCGAMVRQVL-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V++ +EPG  +V     L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVKLEIEPGRFLVAQAGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     +      +V G  C +GD+F        E      VK GD +   D   Y
Sbjct: 319 ALAAEGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
             +  + +N   +    + +        R  + 
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411


>gi|319936660|ref|ZP_08011073.1| diaminopimelate decarboxylase [Coprobacillus sp. 29_1]
 gi|319808217|gb|EFW04782.1| diaminopimelate decarboxylase [Coprobacillus sp. 29_1]
          Length = 436

 Score =  198 bits (504), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 59/398 (14%), Positives = 125/398 (31%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++ +  +   ++        K   V  L A K F+   ++    +Y  G    S 
Sbjct: 30  GTPLYVMSEGHMRYQMNELKEKFLDKYENVLPLFASKSFSCLEIYKLAKEYGIGIDCVSA 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+ +     F      ++   K           + D  + +   +++  ++ A KL+K 
Sbjct: 90  GEISIALKAGFDPHKIYFHGNNKLPSEIEYAITHDVDHFVIDNFHEIDLVEEIATKLNKT 149

Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
           I   +R+ P +              ++ G   +           I S      G+  H  
Sbjct: 150 IYATVRVVPEIKAGGHGFIQTGHKDTKFGFSARHGIYLDAIQKIINSHSIQFEGIHCHIG 209

Query: 167 CENKSFLCFSAMLKNI----EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            +      + + +K       + +      +  I+ GGG              + +    
Sbjct: 210 SQVFDLYAYVSAMKRFVGFAYEIYDKLGVMVTKINAGGGYGIAYTKKDEPLDFEVITTEI 269

Query: 223 EKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            K               + +EPG  +V N      T+  + E       V     +  ++
Sbjct: 270 MKTIQEGYEKRGWDMPMVLVEPGRYVVGNAGITLYTIGTVKEIPDVRTYVSIDGGMTDNI 329

Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   I  N         A + G+ C +GDI  +       + GD  +      
Sbjct: 330 RTCLYDADYDGIIVNKAEEPKTLKATISGKVCESGDIVVKEVKIAKPEPGDIFAQFSTGA 389

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
           Y+ +  + +N +  P +       + + IR  +++D  
Sbjct: 390 YHYSMASNYNQLPKPAVVFTYKGKSKRVIRRQTFDDLI 427


>gi|15803358|ref|NP_289391.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 EDL933]
 gi|15832949|ref|NP_311722.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. Sakai]
 gi|168747702|ref|ZP_02772724.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str.
           EC4113]
 gi|168753756|ref|ZP_02778763.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str.
           EC4401]
 gi|168759947|ref|ZP_02784954.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str.
           EC4501]
 gi|168766812|ref|ZP_02791819.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str.
           EC4486]
 gi|168775696|ref|ZP_02800703.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str.
           EC4196]
 gi|168778833|ref|ZP_02803840.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str.
           EC4076]
 gi|168785664|ref|ZP_02810671.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC869]
 gi|168799952|ref|ZP_02824959.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC508]
 gi|195936442|ref|ZP_03081824.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str.
           EC4024]
 gi|208808464|ref|ZP_03250801.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str.
           EC4206]
 gi|208814582|ref|ZP_03255911.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str.
           EC4045]
 gi|208821663|ref|ZP_03261983.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str.
           EC4042]
 gi|209399305|ref|YP_002272302.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str.
           EC4115]
 gi|217327343|ref|ZP_03443426.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str.
           TW14588]
 gi|254794777|ref|YP_003079614.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str.
           TW14359]
 gi|261226137|ref|ZP_05940418.1| diaminopimelate decarboxylase, PLP-binding protein [Escherichia
           coli O157:H7 str. FRIK2000]
 gi|261256607|ref|ZP_05949140.1| diaminopimelate decarboxylase, PLP-binding protein [Escherichia
           coli O157:H7 str. FRIK966]
 gi|12517327|gb|AAG57950.1|AE005512_9 diaminopimelate decarboxylase [Escherichia coli O157:H7 str.
           EDL933]
 gi|13363167|dbj|BAB37118.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. Sakai]
 gi|187768808|gb|EDU32652.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str.
           EC4196]
 gi|188017893|gb|EDU56015.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str.
           EC4113]
 gi|189003434|gb|EDU72420.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str.
           EC4076]
 gi|189358681|gb|EDU77100.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str.
           EC4401]
 gi|189363642|gb|EDU82061.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str.
           EC4486]
 gi|189369323|gb|EDU87739.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str.
           EC4501]
 gi|189374225|gb|EDU92641.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC869]
 gi|189377664|gb|EDU96080.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. EC508]
 gi|208728265|gb|EDZ77866.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str.
           EC4206]
 gi|208735859|gb|EDZ84546.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str.
           EC4045]
 gi|208741786|gb|EDZ89468.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str.
           EC4042]
 gi|209160705|gb|ACI38138.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str.
           EC4115]
 gi|209760940|gb|ACI78782.1| diaminopimelate decarboxylase [Escherichia coli]
 gi|209760942|gb|ACI78783.1| diaminopimelate decarboxylase [Escherichia coli]
 gi|209760946|gb|ACI78785.1| diaminopimelate decarboxylase [Escherichia coli]
 gi|217319710|gb|EEC28135.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str.
           TW14588]
 gi|254594177|gb|ACT73538.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli
           O157:H7 str. TW14359]
 gi|320189168|gb|EFW63827.1| Diaminopimelate decarboxylase [Escherichia coli O157:H7 str.
           EC1212]
 gi|326339093|gb|EGD62908.1| Diaminopimelate decarboxylase [Escherichia coli O157:H7 str. 1044]
 gi|326343025|gb|EGD66793.1| Diaminopimelate decarboxylase [Escherichia coli O157:H7 str. 1125]
          Length = 420

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 56/393 (14%), Positives = 115/393 (29%), Gaps = 46/393 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D      +S     +   +V   ++    +     ++
Sbjct: 82  RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMFDQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G          D I+     + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                    + +    F   ++ IS GGG+             + Y       R +    
Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     +      +V G  C +GD+F        E      VK GD +   D   Y
Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVEPRALPEVKAGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
             +  + +N   +    + +        R  + 
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411


>gi|210622918|ref|ZP_03293441.1| hypothetical protein CLOHIR_01389 [Clostridium hiranonis DSM 13275]
 gi|210154023|gb|EEA85029.1| hypothetical protein CLOHIR_01389 [Clostridium hiranonis DSM 13275]
          Length = 430

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 65/399 (16%), Positives = 134/399 (33%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           KTP Y+ D+Q + +N        K    G ++  A K F    M   + +        S 
Sbjct: 29  KTPLYVFDEQLIRDNCREYRKYFKAEENGNRVAYAGKAFLPGYMCRLIKEEKMCLDVVSG 88

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK--LH 115
            E+   H+  F  E   ++   K  E   +         + +   +L+  ++  ++    
Sbjct: 89  GELYTAHKSGFPMENIFFHGNNKTREEVEMGVEYGVGKFVVDNFYELDLLEEICEREDKV 148

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           ++I  RI P +           +  S+ G            +   E +   + GL  H  
Sbjct: 149 QEIYFRITPGIEAHTHEYIKTGQIDSKFGFALVNGDLYNAIEKLKEYKRVKLVGLHAHIG 208

Query: 167 CENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD----FCQRL 218
            +      F      M+K +++   ++  ++  + LGGG+     +         FC+ +
Sbjct: 209 SQIFELEPFLDEVDVMMKLVKEIKENYGIELTDVDLGGGVGVYYTEEDKPRAIKDFCEAI 268

Query: 219 KEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            + +EK           + +EPG +++ N  +   T+  I +     V V     +  ++
Sbjct: 269 IDRAEKTCAELGMEVPHLVIEPGRSVIANAGSTLYTIGSIKDIKDVRVYVSVDGGMTDNI 328

Query: 270 PDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L +        N           + G+ C +GDI         ++ GD +       
Sbjct: 329 RPSLYHAGYECSIVNKMNGDTENRVTIAGKCCESGDILINNVAISEIESGDILITTSTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  + +N I  P +            R  ++ D   
Sbjct: 389 YGYSMASNYNKIQKPAVIAVKNGEITPVCRRQTFEDVLA 427


>gi|293416082|ref|ZP_06658722.1| diaminopimelate decarboxylase [Escherichia coli B185]
 gi|291432271|gb|EFF05253.1| diaminopimelate decarboxylase [Escherichia coli B185]
          Length = 420

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 57/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D      +S     +   +V  L++    +     ++
Sbjct: 82  RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G          D I+     + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                    + +    F   ++ IS GGG+             + Y       R +    
Sbjct: 200 HLEQVCGAMVRQVL-EFGQDLQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     +      +V G  C +GD+F        E      VK GD +   D   Y
Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
             +  + +N   +    + +        R  + 
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411


>gi|261879429|ref|ZP_06005856.1| diaminopimelate decarboxylase [Prevotella bergensis DSM 17361]
 gi|270333998|gb|EFA44784.1| diaminopimelate decarboxylase [Prevotella bergensis DSM 17361]
          Length = 393

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 58/366 (15%), Positives = 113/366 (30%), Gaps = 26/366 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALY-IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           + TP+Y  D   L    DT      K     +  A+K  A   +   +     G    S 
Sbjct: 13  LPTPFYYYDTDLLRQTTDTVRREAGKYEDFVVHYAVKANANPKILGMICASGLGADCVSG 72

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F      Y    K       A+ +        ++ +L    + A  + + 
Sbjct: 73  GEIQACLDAGFSPNKIVYAGVGKSDWEINLALEAGIFCFNVESMPELEIINELAAAKNVT 132

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCE 168
             I LRINP V              ++ G    +   +          N  GL FH   +
Sbjct: 133 AGICLRINPDVDAHTHANITTGLAENKFGIAMNEMETAVLKATSLSNINFMGLHFHIGSQ 192

Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
                 F      +  ++         ++ +++GGG+    +             F+  +
Sbjct: 193 ILEMNDFEKLCNRINALQDLLEARGIVVKELNVGGGLGVDYEVPDQHPIPDFETYFATYH 252

Query: 226 SV-------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLY-- 275
                    +++ E G AIV    TL +  L + +       + D+ +   +   L    
Sbjct: 253 HHLKRRPGQRVHFELGRAIVAQMGTLISRTLYVKQGTHKKFAILDAGMTELIRPALYQAL 312

Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
            +   +          V G  C + D+F + +    +  GD ++      Y  +  + +N
Sbjct: 313 HKIENLSSKAPQERYDVVGPICESSDVFAKDYLLNQLHRGDLVAIRSSGAYGESMASQYN 372

Query: 336 GINMPT 341
              +P 
Sbjct: 373 CRKLPK 378


>gi|256019366|ref|ZP_05433231.1| diaminopimelate decarboxylase [Shigella sp. D9]
 gi|332280484|ref|ZP_08392897.1| diaminopimelate decarboxylase [Shigella sp. D9]
 gi|332102836|gb|EGJ06182.1| diaminopimelate decarboxylase [Shigella sp. D9]
          Length = 420

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 57/393 (14%), Positives = 115/393 (29%), Gaps = 46/393 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D      +S     +   +V  L++    +     ++
Sbjct: 82  RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G          D I+     + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                    + +    F   ++ IS GGG+             + Y       R +    
Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V++ +EPG  +V  +  L T V  +     ++ V+VD      +   +        
Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDVGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     +      +V G  C +GD+F        E      VK GD +   D   Y
Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
             +  + +N   +    + +        R  + 
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411


>gi|74313409|ref|YP_311828.1| diaminopimelate decarboxylase [Shigella sonnei Ss046]
 gi|157157020|ref|YP_001464173.1| diaminopimelate decarboxylase [Escherichia coli E24377A]
 gi|260856951|ref|YP_003230842.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli
           O26:H11 str. 11368]
 gi|260869518|ref|YP_003235920.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli
           O111:H- str. 11128]
 gi|300820628|ref|ZP_07100779.1| diaminopimelate decarboxylase [Escherichia coli MS 119-7]
 gi|331678817|ref|ZP_08379491.1| diaminopimelate decarboxylase [Escherichia coli H591]
 gi|73856886|gb|AAZ89593.1| diaminopimelate decarboxylase [Shigella sonnei Ss046]
 gi|157079050|gb|ABV18758.1| diaminopimelate decarboxylase [Escherichia coli E24377A]
 gi|257755600|dbj|BAI27102.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli
           O26:H11 str. 11368]
 gi|257765874|dbj|BAI37369.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli
           O111:H- str. 11128]
 gi|300526892|gb|EFK47961.1| diaminopimelate decarboxylase [Escherichia coli MS 119-7]
 gi|320656528|gb|EFX24424.1| diaminopimelate decarboxylase [Escherichia coli O55:H7 str. 3256-97
           TW 07815]
 gi|320662047|gb|EFX29448.1| diaminopimelate decarboxylase [Escherichia coli O55:H7 str. USDA
           5905]
 gi|323154816|gb|EFZ41010.1| diaminopimelate decarboxylase [Escherichia coli EPECa14]
 gi|323167952|gb|EFZ53642.1| diaminopimelate decarboxylase [Shigella sonnei 53G]
 gi|323180275|gb|EFZ65827.1| diaminopimelate decarboxylase [Escherichia coli 1180]
 gi|331073647|gb|EGI44968.1| diaminopimelate decarboxylase [Escherichia coli H591]
          Length = 420

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 57/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D      +S     +   +V  L++    +     ++
Sbjct: 82  RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G          D I+     + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                    + +    F   ++ IS GGG+             + Y       R +    
Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     +      +V G  C +GD+F        E      VK GD +   D   Y
Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
             +  + +N   +    + +        R  + 
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411


>gi|320182254|gb|EFW57157.1| Diaminopimelate decarboxylase [Shigella boydii ATCC 9905]
 gi|332087341|gb|EGI92469.1| diaminopimelate decarboxylase [Shigella boydii 5216-82]
 gi|332999594|gb|EGK19179.1| diaminopimelate decarboxylase [Shigella flexneri VA-6]
          Length = 420

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 57/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAALKQFEV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D      +S     +   +V  L++    +     ++
Sbjct: 82  RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G          D I+     + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                    + +    F   ++ IS GGG+             + Y       R +    
Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     +      +V G  C +GD+F        E      VK GD +   D   Y
Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
             +  + +N   +    + +        R  + 
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411


>gi|300815742|ref|ZP_07095966.1| diaminopimelate decarboxylase [Escherichia coli MS 107-1]
 gi|300531671|gb|EFK52733.1| diaminopimelate decarboxylase [Escherichia coli MS 107-1]
          Length = 420

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 57/393 (14%), Positives = 117/393 (29%), Gaps = 46/393 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D      +S     +   +V  L++    +     ++
Sbjct: 82  RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G          D I+     + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                 +  + +    F   ++ IS GGG+             + Y       R +    
Sbjct: 200 HLEQVCVAMVRQVI-EFGQDLQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     +      +V G  C +GD+F        E      VK GD +   D   Y
Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
             +  + +N   +    + +        R  + 
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411


>gi|259503055|ref|ZP_05745957.1| diaminopimelate decarboxylase [Lactobacillus antri DSM 16041]
 gi|259168921|gb|EEW53416.1| diaminopimelate decarboxylase [Lactobacillus antri DSM 16041]
          Length = 468

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 67/399 (16%), Positives = 122/399 (30%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D  ++   +     + ++  V   +  A K FAA  M+   +Q        S 
Sbjct: 61  GTPLVVYDVSRIRQQIRAFKRVFEDNQVDYAVSYASKAFAAIAMYQLADQEGAHVDVVSG 120

Query: 61  YEVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F     +++   K  D  + AV +N   ++ +   ++         L   
Sbjct: 121 GEMYTALKADFPLSHASFHGNNKSYDELVLAVKNNIGVVVVDNFYEITLLNQVLADLDAH 180

Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNN 166
           +   LRI P +S          +  S+ G   +           + S    + GL  H  
Sbjct: 181 VKVMLRITPGISAHTNKYIQTGQVDSKFGFDLESGQADRALEAVLASPRMTMVGLHAHIG 240

Query: 167 CENKSFLCFSAMLKN----IEKEFGHFITQIEWISLGGGIHFTD--------KDYPVKDF 214
            +      F  +              +  Q + I++GGG              +  V   
Sbjct: 241 SQIFELAGFEGVANKLVAVASHWQQKYDYQAQVINVGGGFGIRYTKADQPLRPEEFVDAI 300

Query: 215 CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            + +K            I++EPG +IV        TV    +       V     +  ++
Sbjct: 301 IKAIKAAVTPTALEMPAIWIEPGRSIVGPAGFNLYTVGSRKDLPGYRPFVTVDGGMGDNI 360

Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   E  T+              + G+ C +GDI  +       K GD ++  D   
Sbjct: 361 RPALYQAEYETVLARDPQAPLTEHVRLAGKYCESGDILSQDQALPATKPGDVLAMLDTGA 420

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y     + +N    P +       +   I   SY D   
Sbjct: 421 YGYAMASNYNRNPRPAVVFAENGHSQLVIERESYEDLVR 459


>gi|189467084|ref|ZP_03015869.1| hypothetical protein BACINT_03467 [Bacteroides intestinalis DSM
           17393]
 gi|189435348|gb|EDV04333.1| hypothetical protein BACINT_03467 [Bacteroides intestinalis DSM
           17393]
          Length = 386

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 65/365 (17%), Positives = 122/365 (33%), Gaps = 26/365 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTAL-YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           ++TP+Y  D + L + L        K    ++  A+K  A   +   + +   G    S 
Sbjct: 13  LRTPFYYYDTKVLRDTLSCVRAEAAKYGNFEVHYAVKANANSKVLSIIRENGLGADCVSG 72

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            EV       F      +    K       ++  N       ++ +L    + A  +   
Sbjct: 73  GEVRAAVKAGFPTNKIVFAGVGKSDWEINLSLDYNIFCFNVESIPELEIINELAAAKGKV 132

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168
             +  RINP+V              ++ G   +D        +E +     GL FH   +
Sbjct: 133 ANVAFRINPNVGAHTHANITTGLAENKFGISMQDMDHVIEVALEMKNVKFIGLHFHIGSQ 192

Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-------DFCQRL 218
                 F+     +  ++ +      +IE I++GGG+    K    +        F    
Sbjct: 193 ILDMGDFVALCNRVNELQDKLEAHRIRIEHINVGGGLGIDYKHPNRQAIPDFKDYFSTYA 252

Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL--Y 275
           +    +    ++ E G AI     +L + VL + +       + D+ +   +   L   Y
Sbjct: 253 EHLKLRSYQTLHFELGRAITGQCGSLISQVLYVKQGANKKFAILDAGMTDLIRPALYQAY 312

Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
            +   I          V G  C + D+FG+      VK GD I+      Y     + +N
Sbjct: 313 HKIENITSEDAVEAYDVVGPICESSDVFGKAIDLNKVKRGDLIALRSAGAYGEIMASSYN 372

Query: 336 GINMP 340
              +P
Sbjct: 373 CRELP 377


>gi|167765998|ref|ZP_02438051.1| hypothetical protein CLOSS21_00489 [Clostridium sp. SS2/1]
 gi|167712355|gb|EDS22934.1| hypothetical protein CLOSS21_00489 [Clostridium sp. SS2/1]
 gi|291558790|emb|CBL37590.1| Diaminopimelate decarboxylase [butyrate-producing bacterium SSC/2]
          Length = 416

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 63/391 (16%), Positives = 112/391 (28%), Gaps = 30/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   GT  SSL 
Sbjct: 20  PTPFHLYDEKGIRETARGLYKAFSWNKGFKEYFAVKATPNPTILKILKEEGCGTDCSSLT 79

Query: 62  EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+M+     F G    ++       E         TI  + ++ +   K+ A    K   
Sbjct: 80  ELMMSDRCGFDGSEIMFSSNDTPAEEFILAKQLGATINLDDITHIEFLKECAGIPEKISC 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVNGLMFH------NNCEN 169
                 V      + D     ++ G   +   E+  +     V     H           
Sbjct: 140 RYNPGGVFALGTDIMDNPG-DAKYGMTTEQIFEAFKQLKELGVKEFGIHSFLASNTVTNE 198

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                   + +   K        I +I+L GG+          +    + E   K   + 
Sbjct: 199 YYPTLAKQLFELAVKLKEEVGVHIGFINLSGGVGIPYLPDQEGNDIAVIGEGVHKVYDEV 258

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     I+ E G  ++     L T  +      K  + VD+     +   +     
Sbjct: 259 LVPAGMGDVKIFTELGRYMLAPNGHLVTKAIHEKHTHKEYIGVDACAVNLMRPAMYGAYH 318

Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                            + G  C   D F        + +GD +   D   +       +
Sbjct: 319 HITVMGKENEPADHVYDITGSLCENNDKFAIDRKLPKIDMGDLLVIHDTGAHGFAMGYNY 378

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   DGT + IR   +  DY+ 
Sbjct: 379 NGKLKSAEILLKEDGTTEMIRRAETPEDYFA 409


>gi|237715165|ref|ZP_04545646.1| diaminopimelate decarboxylase [Bacteroides sp. D1]
 gi|262408884|ref|ZP_06085429.1| diaminopimelate decarboxylase [Bacteroides sp. 2_1_22]
 gi|294644345|ref|ZP_06722111.1| diaminopimelate decarboxylase [Bacteroides ovatus SD CC 2a]
 gi|294810703|ref|ZP_06769351.1| diaminopimelate decarboxylase [Bacteroides xylanisolvens SD CC 1b]
 gi|229444998|gb|EEO50789.1| diaminopimelate decarboxylase [Bacteroides sp. D1]
 gi|262353095|gb|EEZ02190.1| diaminopimelate decarboxylase [Bacteroides sp. 2_1_22]
 gi|292640315|gb|EFF58567.1| diaminopimelate decarboxylase [Bacteroides ovatus SD CC 2a]
 gi|294442036|gb|EFG10855.1| diaminopimelate decarboxylase [Bacteroides xylanisolvens SD CC 1b]
          Length = 386

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 63/366 (17%), Positives = 119/366 (32%), Gaps = 26/366 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           ++TP+Y  D + L + L      + K     +  A+K  A   +   + +   G    S 
Sbjct: 13  LQTPFYYYDTKVLRDTLSAINQEVAKYPNYSVHYAVKANANPKVLTIIRESGMGADCVSG 72

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115
            E+       F  +   +    K      +        FN  ++ +L    + A  Q   
Sbjct: 73  GEIRAAIRAGFPADKVVFAGVGKADWEINLGLEYGIFCFNVESIPELEVINELAAAQNKV 132

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168
             +  RINP V              ++ G   +D         E +     GL FH   +
Sbjct: 133 ANVAFRINPDVGAHTHANITTGLAENKFGISMQDMDKVIDVAQEMKNVKFIGLHFHIGSQ 192

Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-------DFCQRL 218
                 F+     +  ++ +       +E I++GGG+         +        F    
Sbjct: 193 ILDMGDFVALCNRVNELQDKLEARRILVEHINVGGGLGIDYGHPNRQAIPNFKDYFATYA 252

Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQE 277
            +   +    ++ E G A+V    +L + VL + +  +    + D+ +   +   L    
Sbjct: 253 GQLKLRPYQTLHFELGRAVVGQCGSLISKVLYVKQGTRKKFAILDAGMTDLIRPALYQAF 312

Query: 278 S--ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                I          V G  C + D+FG+      VK GD I+      Y     + +N
Sbjct: 313 HKMENITSEEPLEAYDVVGPICESSDVFGKAIDLNKVKRGDLIALRSAGAYGEIMASGYN 372

Query: 336 GINMPT 341
              +P 
Sbjct: 373 CRELPK 378


>gi|39654106|pdb|1KNW|A Chain A, Crystal Structure Of Diaminopimelate Decarboxylase
 gi|39654107|pdb|1KO0|A Chain A, Crystal Structure Of A D,L-Lysine Complex Of
           Diaminopimelate Decarboxylase
          Length = 425

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 57/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D      +S     +   +V  L++    +     ++
Sbjct: 82  RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G          D I+     + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                    + +    F   ++ IS GGG+             + Y       R +    
Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     +      +V G  C +GD+F        E      VK GD +   D   Y
Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
             +  + +N   +    + +        R  + 
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411


>gi|16130742|ref|NP_417315.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli str.
           K-12 substr. MG1655]
 gi|89109621|ref|AP_003401.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli str.
           K-12 substr. W3110]
 gi|157162291|ref|YP_001459609.1| diaminopimelate decarboxylase [Escherichia coli HS]
 gi|170018919|ref|YP_001723873.1| diaminopimelate decarboxylase [Escherichia coli ATCC 8739]
 gi|170082406|ref|YP_001731726.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli str.
           K-12 substr. DH10B]
 gi|188494453|ref|ZP_03001723.1| diaminopimelate decarboxylase [Escherichia coli 53638]
 gi|191166012|ref|ZP_03027848.1| diaminopimelate decarboxylase [Escherichia coli B7A]
 gi|193071432|ref|ZP_03052346.1| diaminopimelate decarboxylase [Escherichia coli E110019]
 gi|194439964|ref|ZP_03072024.1| diaminopimelate decarboxylase [Escherichia coli 101-1]
 gi|209920286|ref|YP_002294370.1| diaminopimelate decarboxylase [Escherichia coli SE11]
 gi|218555387|ref|YP_002388300.1| diaminopimelate decarboxylase [Escherichia coli IAI1]
 gi|218696434|ref|YP_002404101.1| diaminopimelate decarboxylase [Escherichia coli 55989]
 gi|238901974|ref|YP_002927770.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli
           BW2952]
 gi|253772307|ref|YP_003035138.1| diaminopimelate decarboxylase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254037891|ref|ZP_04871949.1| diaminopimelate decarboxylase [Escherichia sp. 1_1_43]
 gi|254162766|ref|YP_003045874.1| diaminopimelate decarboxylase [Escherichia coli B str. REL606]
 gi|293449162|ref|ZP_06663583.1| diaminopimelate decarboxylase [Escherichia coli B088]
 gi|297518158|ref|ZP_06936544.1| diaminopimelate decarboxylase [Escherichia coli OP50]
 gi|300906633|ref|ZP_07124322.1| diaminopimelate decarboxylase [Escherichia coli MS 84-1]
 gi|300920304|ref|ZP_07136743.1| diaminopimelate decarboxylase [Escherichia coli MS 115-1]
 gi|300931304|ref|ZP_07146643.1| diaminopimelate decarboxylase [Escherichia coli MS 187-1]
 gi|300950577|ref|ZP_07164482.1| diaminopimelate decarboxylase [Escherichia coli MS 116-1]
 gi|300958158|ref|ZP_07170315.1| diaminopimelate decarboxylase [Escherichia coli MS 175-1]
 gi|301026182|ref|ZP_07189650.1| diaminopimelate decarboxylase [Escherichia coli MS 196-1]
 gi|301302976|ref|ZP_07209103.1| diaminopimelate decarboxylase [Escherichia coli MS 124-1]
 gi|301645193|ref|ZP_07245146.1| diaminopimelate decarboxylase [Escherichia coli MS 146-1]
 gi|307139522|ref|ZP_07498878.1| diaminopimelate decarboxylase [Escherichia coli H736]
 gi|307310551|ref|ZP_07590199.1| diaminopimelate decarboxylase [Escherichia coli W]
 gi|309793887|ref|ZP_07688312.1| diaminopimelate decarboxylase [Escherichia coli MS 145-7]
 gi|331643524|ref|ZP_08344655.1| diaminopimelate decarboxylase [Escherichia coli H736]
 gi|331669571|ref|ZP_08370417.1| diaminopimelate decarboxylase [Escherichia coli TA271]
 gi|118303|sp|P00861|DCDA_ECOLI RecName: Full=Diaminopimelate decarboxylase; Short=DAP
           decarboxylase
 gi|455170|gb|AAA83861.1| diaminopimelate decarboxylase [Escherichia coli]
 gi|882731|gb|AAB40485.1| diaminopimelate decarboxylase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|1789203|gb|AAC75877.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli str.
           K-12 substr. MG1655]
 gi|85675654|dbj|BAE76907.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli str.
           K12 substr. W3110]
 gi|157067971|gb|ABV07226.1| diaminopimelate decarboxylase [Escherichia coli HS]
 gi|169753847|gb|ACA76546.1| diaminopimelate decarboxylase [Escherichia coli ATCC 8739]
 gi|169890241|gb|ACB03948.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli str.
           K-12 substr. DH10B]
 gi|188489652|gb|EDU64755.1| diaminopimelate decarboxylase [Escherichia coli 53638]
 gi|190903960|gb|EDV63673.1| diaminopimelate decarboxylase [Escherichia coli B7A]
 gi|192955249|gb|EDV85738.1| diaminopimelate decarboxylase [Escherichia coli E110019]
 gi|194421113|gb|EDX37140.1| diaminopimelate decarboxylase [Escherichia coli 101-1]
 gi|209913545|dbj|BAG78619.1| diaminopimelate decarboxylase [Escherichia coli SE11]
 gi|218353166|emb|CAU99032.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli 55989]
 gi|218362155|emb|CAQ99764.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli IAI1]
 gi|226839515|gb|EEH71536.1| diaminopimelate decarboxylase [Escherichia sp. 1_1_43]
 gi|238860758|gb|ACR62756.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli
           BW2952]
 gi|242378386|emb|CAQ33164.1| diaminopimelate decarboxylase [Escherichia coli BL21(DE3)]
 gi|253323351|gb|ACT27953.1| diaminopimelate decarboxylase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253974667|gb|ACT40338.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli B str.
           REL606]
 gi|253978832|gb|ACT44502.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli
           BL21(DE3)]
 gi|260448113|gb|ACX38535.1| diaminopimelate decarboxylase [Escherichia coli DH1]
 gi|291322252|gb|EFE61681.1| diaminopimelate decarboxylase [Escherichia coli B088]
 gi|299879809|gb|EFI88020.1| diaminopimelate decarboxylase [Escherichia coli MS 196-1]
 gi|300315180|gb|EFJ64964.1| diaminopimelate decarboxylase [Escherichia coli MS 175-1]
 gi|300401534|gb|EFJ85072.1| diaminopimelate decarboxylase [Escherichia coli MS 84-1]
 gi|300412687|gb|EFJ95997.1| diaminopimelate decarboxylase [Escherichia coli MS 115-1]
 gi|300450105|gb|EFK13725.1| diaminopimelate decarboxylase [Escherichia coli MS 116-1]
 gi|300460888|gb|EFK24381.1| diaminopimelate decarboxylase [Escherichia coli MS 187-1]
 gi|300841640|gb|EFK69400.1| diaminopimelate decarboxylase [Escherichia coli MS 124-1]
 gi|301076463|gb|EFK91269.1| diaminopimelate decarboxylase [Escherichia coli MS 146-1]
 gi|306909446|gb|EFN39941.1| diaminopimelate decarboxylase [Escherichia coli W]
 gi|308122294|gb|EFO59556.1| diaminopimelate decarboxylase [Escherichia coli MS 145-7]
 gi|309703193|emb|CBJ02527.1| diaminopimelate decarboxylase [Escherichia coli ETEC H10407]
 gi|315062145|gb|ADT76472.1| diaminopimelate decarboxylase, PLP-binding protein [Escherichia
           coli W]
 gi|315137442|dbj|BAJ44601.1| diaminopimelate decarboxylase [Escherichia coli DH1]
 gi|315256700|gb|EFU36668.1| diaminopimelate decarboxylase [Escherichia coli MS 85-1]
 gi|315615226|gb|EFU95863.1| diaminopimelate decarboxylase [Escherichia coli 3431]
 gi|323183383|gb|EFZ68780.1| diaminopimelate decarboxylase [Escherichia coli 1357]
 gi|323377275|gb|ADX49543.1| diaminopimelate decarboxylase [Escherichia coli KO11]
 gi|323935802|gb|EGB32105.1| diaminopimelate decarboxylase [Escherichia coli E1520]
 gi|323941552|gb|EGB37733.1| diaminopimelate decarboxylase [Escherichia coli E482]
 gi|323946526|gb|EGB42550.1| diaminopimelate decarboxylase [Escherichia coli H120]
 gi|323960718|gb|EGB56341.1| diaminopimelate decarboxylase [Escherichia coli H489]
 gi|323971632|gb|EGB66862.1| diaminopimelate decarboxylase [Escherichia coli TA007]
 gi|324016306|gb|EGB85525.1| diaminopimelate decarboxylase [Escherichia coli MS 117-3]
 gi|324119878|gb|EGC13757.1| diaminopimelate decarboxylase [Escherichia coli E1167]
 gi|331036995|gb|EGI09219.1| diaminopimelate decarboxylase [Escherichia coli H736]
 gi|331063239|gb|EGI35152.1| diaminopimelate decarboxylase [Escherichia coli TA271]
 gi|332344729|gb|AEE58063.1| diaminopimelate decarboxylase LysA [Escherichia coli UMNK88]
          Length = 420

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 57/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D      +S     +   +V  L++    +     ++
Sbjct: 82  RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G          D I+     + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                    + +    F   ++ IS GGG+             + Y       R +    
Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     +      +V G  C +GD+F        E      VK GD +   D   Y
Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
             +  + +N   +    + +        R  + 
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411


>gi|72382497|ref|YP_291852.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. NATL2A]
 gi|72002347|gb|AAZ58149.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. NATL2A]
          Length = 454

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 56/395 (14%), Positives = 117/395 (29%), Gaps = 33/395 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP Y++D+  L     T +             L A K  ++  +   ++    G  + S
Sbjct: 48  GTPLYVLDELSLRTACKTYISSLNKHYPGKSLPLFASKANSSLAICAVISSEGFGLDAVS 107

Query: 60  LYEVMLGHEKFGGET--HAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-QKLHK 116
             E++        E     +       E++   SN  TI+ +    +   K+ A      
Sbjct: 108 EGELLTAINGGVKEKDIVFHGNNKSQDELNFAYSNNVTIVLDNYHDIELLKNIASDNKPA 167

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCEN 169
           K+ LR  P +              S+ G          ++    +  N+ GL  H   + 
Sbjct: 168 KLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDELKSILEELKTYKWANLTGLHAHIGSQI 227

Query: 170 KSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-- 224
                   +   +             +  ++LGGG+             ++  E   K  
Sbjct: 228 FEVQPHIDLAGVMADALKLAKEIGHPVVDLNLGGGLGIKYVQEDNPPSIEKWVEIISKAV 287

Query: 225 ---------YSVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDYL 273
                       ++  EPG ++V N+      +    +   ++  + VD  +  +     
Sbjct: 288 VNACRERNLDLPRLMCEPGRSLVANSGLTIYKIGAKKVVPGVRTYLSVDGGMSDNPRPIT 347

Query: 274 LYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
                +    +           + G+ C +GD+  +       + GD ++      YN +
Sbjct: 348 YQSLYSACLVDKPMNTNFEKVTIAGKHCESGDVLLKDFLLPSCESGDFLAVFGTGAYNYS 407

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             + +N I  P   +          R     D   
Sbjct: 408 MSSNYNRIPRPATIIVGKGLAELTQRRELPEDLLQ 442


>gi|315608892|ref|ZP_07883865.1| diaminopimelate decarboxylase [Prevotella buccae ATCC 33574]
 gi|315249419|gb|EFU29435.1| diaminopimelate decarboxylase [Prevotella buccae ATCC 33574]
          Length = 386

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 66/368 (17%), Positives = 124/368 (33%), Gaps = 28/368 (7%)

Query: 4   TPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           TP+Y  D + L   L +      ++ G  +  A+K  A   + + + Q   G    S  E
Sbjct: 16  TPFYYYDTELLRRTLKSINDEAARHDGFVVHYAVKANANPKVLNVICQAGLGADCVSGGE 75

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +       F      +    K       A+  N       ++ +L    + A +      
Sbjct: 76  IEAALRAGFPASKTVFAGVGKSDWEINLALDKNIFCFNVESIPELEIINELAARKGTTAR 135

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCEN- 169
              RINP++              ++ G   +D           E     GL FH   +  
Sbjct: 136 VAFRINPNIGAHTHANITTGLAENKFGIALEDMDSVIERAATLEHVAFVGLHFHIGSQIL 195

Query: 170 --KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
               F      + +++    H   ++E +++GGG+      +P +      K + + Y+ 
Sbjct: 196 DMGDFKALCNRINDLQAHLEHRHIRLEHLNVGGGLGIDY-HHPNRVPVPDFKAYFDTYAR 254

Query: 228 QI--------YLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL--YQ 276
            +        + E G A+V    TL T  L + +   K   IVD+ +   +   L   Y 
Sbjct: 255 HLKLREGQRLHFELGRAVVGQMGTLITRTLYVKQGAAKQFAIVDAGMTDLIRPALYQAYH 314

Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
           +   +     P T  V G  C + D+F +         GD ++      Y     + +N 
Sbjct: 315 KIENLSSQEPPETYDVVGPICESSDVFAKAVDLNKAHRGDLMAIRSAGAYGEIMASGYNC 374

Query: 337 INMPTIAV 344
             +P   +
Sbjct: 375 RQLPAGYI 382


>gi|307151051|ref|YP_003886435.1| diaminopimelate decarboxylase [Cyanothece sp. PCC 7822]
 gi|306981279|gb|ADN13160.1| diaminopimelate decarboxylase [Cyanothece sp. PCC 7822]
          Length = 476

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 53/403 (13%), Positives = 114/403 (28%), Gaps = 41/403 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P Y++D+  L           K       +++ A K ++   +   +     G    S
Sbjct: 60  GSPLYILDEFTLRTACQQYREAFKKYYPGQSQVIYASKAWSCMAVCAIIASEGLGFDVVS 119

Query: 60  LYEVMLGHE---------KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK 110
             E+    +         +   + + +       E++  L +  TII +   +L      
Sbjct: 120 GGELYTTLQTLEQMGLDQEIATKIYFHGNNKSKSELNFALDSGCTIIVDNWLELETLVKL 179

Query: 111 AQKLHKKIGLRIN--PSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGL 161
                K I + +   P +              S+ G                   N  GL
Sbjct: 180 GGNRSKSIRIMLRLTPGIECHTHEYIRTGHLDSKFGFDPHQLEAVLTYVSENPVFNCIGL 239

Query: 162 MFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRL 218
             H   +         +   +             IE +++GGG+     +       +  
Sbjct: 240 HAHIGSQIFETQPHYDLAAVLVSCMKAALERGLPIEELNIGGGLGIRYTEKDDPPTIEAW 299

Query: 219 -----------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--V 265
                       +  +    ++  EPG +++ +      TV    E       +     +
Sbjct: 300 VKNVATALSEACQAQQIPLPKLMAEPGRSLIGSACVTAYTVGSRKEIPDLRTYIAVDGGM 359

Query: 266 EAHVPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321
             +            I  N        T  + G+ C +GDI  +       + GD +   
Sbjct: 360 SDNPRPITYQSLYRAIIANKMSSAATETVTIAGKHCESGDILIKEALLPKTEPGDILVVM 419

Query: 322 DVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
               YN +  + +N ++ P   + N       ++  +Y D   
Sbjct: 420 GTGAYNYSMASNYNRLSRPAAVLVNEGEANLILQRETYEDVLR 462


>gi|300936236|ref|ZP_07151169.1| diaminopimelate decarboxylase [Escherichia coli MS 21-1]
 gi|300458561|gb|EFK22054.1| diaminopimelate decarboxylase [Escherichia coli MS 21-1]
          Length = 420

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 57/393 (14%), Positives = 115/393 (29%), Gaps = 46/393 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D      +S     +   +V  L++    +     ++
Sbjct: 82  RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G          D I+     + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                    + +    F   ++ IS GGG+             + Y       R +    
Sbjct: 200 HLEQVCGAMVRQVL-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                            +V G  C +GD+F        E      VK GD +   D   Y
Sbjct: 319 ALAADGRSLEYAPTVETVVAGPLCESGDVFTQQEGGNVETRVLPEVKAGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
             +  + +N   +    + +        R  + 
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411


>gi|325679598|ref|ZP_08159173.1| putative diaminopimelate decarboxylase [Ruminococcus albus 8]
 gi|324108628|gb|EGC02869.1| putative diaminopimelate decarboxylase [Ruminococcus albus 8]
          Length = 422

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 60/391 (15%), Positives = 115/391 (29%), Gaps = 30/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+++ D++ +  N          N G K   A+K      +   L +   G   SSL 
Sbjct: 19  PTPFHIYDEKGIRENARNLYKAFSWNKGYKEYFAVKATPNPYILKILQEEGCGVDCSSLT 78

Query: 62  EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+M+     F G+   ++       +          I  +  + +               
Sbjct: 79  ELMMSECCGFKGDDIMFSSNVTPAEDYLKARELGAYINLDDFTHIEYLDQLCGIPETICC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKI------ESEIKNVNGLMFHNNCEN---- 169
            R NP   +S       N   ++ G   +  I      + +     GL            
Sbjct: 139 -RYNPGGKFSIATKIMDNPGDAKYGFTHEQIIEGFKVLKEKGAKYFGLHAFLASNTVTNE 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
                   + +   +       + ++I+L GG+    +    ++    + E   K   +I
Sbjct: 198 YYPKLARILFELAVEIKEKTGVEFKFINLSGGVGIAYEPDKPQNDIFAIGEGVHKAFDEI 257

Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                      + E G  ++     L TTV       K    VD+     +   +     
Sbjct: 258 LVPAGMGDVAIFTELGRYMLAPYGHLITTVKHFKHTHKEYAGVDACACNLMRPAMYGAYH 317

Query: 279 ATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        ++ GD +   D   +  +    +
Sbjct: 318 HITVLGKENAPCDHKYDVTGGLCENNDKFAIDRMLPELEKGDILCIHDTGAHGFSMGYNY 377

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   DG ++ IR   +  DY+ 
Sbjct: 378 NGKLRSAELLLKEDGDVQLIRRAETPADYFA 408


>gi|268317211|ref|YP_003290930.1| aspartate kinase [Rhodothermus marinus DSM 4252]
 gi|262334745|gb|ACY48542.1| aspartate kinase [Rhodothermus marinus DSM 4252]
          Length = 878

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 46/361 (12%), Positives = 108/361 (29%), Gaps = 24/361 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y+ D+  L   L+    +  ++  ++  ALK      +    ++   G    S  E+ 
Sbjct: 504 PCYVYDEGTLRGQLEALRRL--SSVDRIFYALKANDHPDVLRVFHEAGLGFECVSAGELE 561

Query: 65  LGHEKFG---GETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
                F     E   +   +    E          +  + +  L  + +     ++ + +
Sbjct: 562 HVRTLFPELAPERLLFTPNFAPADEYRRGFELGAFVTLDNLHPLEAWPEL--FRNRNVLV 619

Query: 121 RINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSFLC 174
           R +P                S+ G         ++  +     + GL  H          
Sbjct: 620 RFDPGRGDGHHRYVRTAGAQSKFGIAPAQAKRLRELADRLGLRIVGLHAHVGSGILLPET 679

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-----SVQI 229
           ++     + +    +   + ++ +GGG+   ++        + ++    ++       ++
Sbjct: 680 WAETALFLAELAETYFPDVRYLDVGGGLGVPERTGAPGLDLEAVEAHLHRFKTAHPRFEL 739

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESATI----YPN 284
           +LEPG  +V     L   V  + E        V++ + + +   L       +       
Sbjct: 740 WLEPGRFLVAEAGVLLARVTQVKEKGGARYAGVETGMNSLIRPALYGAYHEIVNLTRLDA 799

Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344
               T  V G  C  GD+ G        + GD +       Y     + +N         
Sbjct: 800 PATQTVDVVGPICETGDVLGHGRRLPDTREGDVLLIAQAGAYGAVMSSHYNRRPPAREVF 859

Query: 345 K 345
            
Sbjct: 860 L 860


>gi|221065369|ref|ZP_03541474.1| diaminopimelate decarboxylase [Comamonas testosteroni KF-1]
 gi|220710392|gb|EED65760.1| diaminopimelate decarboxylase [Comamonas testosteroni KF-1]
          Length = 427

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 51/400 (12%), Positives = 107/400 (26%), Gaps = 45/400 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   +   +             +  A K  +   +   + +      + S  E
Sbjct: 30  GTPLWVYDAATIRERIAQLK-AFD----TVRFAQKACSNIHILKLMREQGVKVDAVSRGE 84

Query: 63  VMLGHE-----KFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH- 115
           V+          FG      +     D    A +   +  +      ++     A     
Sbjct: 85  VLRALAAGFTPGFGEPADIVFTADVMDEATLATVV--EHKVPVNAGSIDMLHQLAAVSRG 142

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCEN 169
             + LRINP   +      +     S+ G    +   +          + GL  H     
Sbjct: 143 HHVWLRINPGFGHGHSNKTNTGGEHSKHGIWHSELEAALQAIKTGGLVLAGLHMHIGSGV 202

Query: 170 KSFLCFSAMLKNIE--KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE---- 223
                       ++  +        +  IS GGG+    +               +    
Sbjct: 203 DYGHLQEVCGAMVKLVERTKAAGVDLHAISAGGGLSIPYRAGDATIDTDHYHGLWDAARQ 262

Query: 224 ------KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQ 276
                  + + + LEPG  +V  +  L  TV        N  + VD+     +   +   
Sbjct: 263 QAEAIVGHKLGLELEPGRFLVAESGVLLGTVRATKNAGSNHFVLVDTGFNELMRPSMYGS 322

Query: 277 ESATIYPNT-----GPYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324
                             ++V G  C +GD+F +               +GD +   D  
Sbjct: 323 YHGMEVLRRDGQSLPAQDSVVAGPLCESGDVFTQGDGGVVLPRSLAGASVGDLLVIHDTG 382

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            Y  +  + +N   +    + +   +    R  +  +   
Sbjct: 383 AYGSSMSSNYNTRPLAAEVLVDGAQSQLIRRRQTVEELLA 422


>gi|152996024|ref|YP_001340859.1| diaminopimelate decarboxylase [Marinomonas sp. MWYL1]
 gi|150836948|gb|ABR70924.1| diaminopimelate decarboxylase [Marinomonas sp. MWYL1]
          Length = 415

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 56/403 (13%), Positives = 124/403 (30%), Gaps = 49/403 (12%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   + + +             +  A K  +   +   + +      + S  E
Sbjct: 17  GTPAWVYDAATIRHQIRQLRDFDV-----IRFAQKACSNIHVLRLMREEGVMVDAVSAGE 71

Query: 63  VMLGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
           +              ++  +     D E   ++   D  +   ++  L++  + A   H 
Sbjct: 72  IERSLVAGYSNSDNPDSIVFTADLIDRETIELVIQHDIPVNIGSMDMLHRIAEVA--PHH 129

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170
            + +R+NP   +      +   P S+ G   +D       I+    ++ G+  H    + 
Sbjct: 130 SVWIRVNPGFGHGHSEKTNTGGPNSKHGITLEDLPRAVALIQQYGLDLIGIHMHIGSGSD 189

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK------ 224
            F   S   + + +        I  IS GGG+         +   +              
Sbjct: 190 -FEHLSQACQAMVEIVKLANVDIRAISTGGGLPVPYLSDDEELDAKAFFRLWNDARKEIE 248

Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279
               +SV++ +EPG  +V N   L   V  +    ++  + VD+     +   +      
Sbjct: 249 SHLGHSVKLEVEPGRYLVGNAGALLAEVHCLKSTAEHNFVLVDAGFNDLIRPSMYGSYHK 308

Query: 280 TIYPNTGPY-----------TAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFE 321
               +                  V G  C +GD+F +              ++GD + F 
Sbjct: 309 IEVVHQHSNQQGLESISNALEYAVAGPLCESGDVFTQNGNGVICHQILDNPRVGDLLVFN 368

Query: 322 DVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           D  GY  +  + +N   +    + +        +    +D   
Sbjct: 369 DAGGYGASMSSNYNSRPLAPEIMIDEGQFRLIRKRQKISDLLA 411


>gi|209760938|gb|ACI78781.1| diaminopimelate decarboxylase [Escherichia coli]
 gi|320640486|gb|EFX10025.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str. G5101]
 gi|320645732|gb|EFX14717.1| diaminopimelate decarboxylase [Escherichia coli O157:H- str.
           493-89]
 gi|320651032|gb|EFX19472.1| diaminopimelate decarboxylase [Escherichia coli O157:H- str. H
           2687]
 gi|320667122|gb|EFX34085.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str.
           LSU-61]
          Length = 420

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 57/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D      +S     +   +V  L++    +     ++
Sbjct: 82  RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G          D I+     + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                    + +    F   ++ IS GGG+             + Y       R +    
Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     +      +V G  C +GD+F        E      VK GD +   D   Y
Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVEPRALPEVKAGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
             +  + +N   +    + +        R  + 
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411


>gi|24114117|ref|NP_708627.1| diaminopimelate decarboxylase [Shigella flexneri 2a str. 301]
 gi|30064179|ref|NP_838350.1| diaminopimelate decarboxylase [Shigella flexneri 2a str. 2457T]
 gi|110806774|ref|YP_690294.1| diaminopimelate decarboxylase [Shigella flexneri 5 str. 8401]
 gi|24053253|gb|AAN44334.1| diaminopimelate decarboxylase [Shigella flexneri 2a str. 301]
 gi|30042436|gb|AAP18160.1| diaminopimelate decarboxylase [Shigella flexneri 2a str. 2457T]
 gi|110616322|gb|ABF04989.1| diaminopimelate decarboxylase [Shigella flexneri 5 str. 8401]
 gi|281602194|gb|ADA75178.1| Diaminopimelate decarboxylase [Shigella flexneri 2002017]
 gi|313647902|gb|EFS12348.1| diaminopimelate decarboxylase [Shigella flexneri 2a str. 2457T]
 gi|332753559|gb|EGJ83939.1| diaminopimelate decarboxylase [Shigella flexneri 4343-70]
 gi|332753695|gb|EGJ84074.1| diaminopimelate decarboxylase [Shigella flexneri K-671]
 gi|332754246|gb|EGJ84612.1| diaminopimelate decarboxylase [Shigella flexneri 2747-71]
 gi|332765793|gb|EGJ96006.1| diaminopimelate decarboxylase [Shigella flexneri 2930-71]
 gi|333000048|gb|EGK19631.1| diaminopimelate decarboxylase [Shigella flexneri K-218]
 gi|333015035|gb|EGK34378.1| diaminopimelate decarboxylase [Shigella flexneri K-304]
          Length = 420

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 57/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAALKQFEV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D      +S     +   +V  L++    +     ++
Sbjct: 82  RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDTLDQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G          D I+     + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                    + +    F   ++ IS GGG+             + Y       R +    
Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     +      +V G  C +GD+F        E      VK GD +   D   Y
Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
             +  + +N   +    + +        R  + 
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411


>gi|167761920|ref|ZP_02434047.1| hypothetical protein BACSTE_00263 [Bacteroides stercoris ATCC
           43183]
 gi|167700152|gb|EDS16731.1| hypothetical protein BACSTE_00263 [Bacteroides stercoris ATCC
           43183]
          Length = 386

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 63/365 (17%), Positives = 122/365 (33%), Gaps = 26/365 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTAL-YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           ++TP+Y  D + L + L        +     +  A+K  A   +   + +   G    S 
Sbjct: 13  LRTPFYYYDTKVLRDTLSCIRTEALRYDNYSVHYAVKANANPKVLTIIRESGLGADCVSG 72

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F  +   +    K      +    N       ++ +L    + A  +   
Sbjct: 73  GEIRAAIKAGFPADKIVFAGVGKADWEINLGLDYNIFCFNVESIPELEIINELAAAKGKV 132

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-----SEIKNVN--GLMFHNNCE 168
             +  RINP+V              ++ G   +D         E+KNV   GL FH   +
Sbjct: 133 ANVAFRINPNVGAHTHANITTGLAENKFGISMEDMDHVIDVAQEMKNVKFIGLHFHIGSQ 192

Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLK 219
                 F+     +  +  +      +IE +++GGG+               K + +   
Sbjct: 193 ILDMGDFVALCNRVNELLDKLEARQIRIEHVNVGGGLGIDYGHPNRQPVPDFKSYFETYD 252

Query: 220 EFSE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQE 277
              + +    ++ E G ++V    +L   VL + +       + D+ +   +   L    
Sbjct: 253 NCLKLRSYQTLHFELGRSVVGQCGSLIAKVLYVKQGTNKQFAILDAGMTDLIRPALYQAF 312

Query: 278 S--ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                I  +    T  V G  C + D+FG+      VK GD I+      Y     + +N
Sbjct: 313 HKIENITSDAPQQTYDVVGPICESSDVFGKAVDLNGVKRGDLIALRSAGAYGEIMASGYN 372

Query: 336 GINMP 340
              +P
Sbjct: 373 CRELP 377


>gi|254424507|ref|ZP_05038225.1| diaminopimelate decarboxylase [Synechococcus sp. PCC 7335]
 gi|196191996|gb|EDX86960.1| diaminopimelate decarboxylase [Synechococcus sp. PCC 7335]
          Length = 472

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 54/395 (13%), Positives = 110/395 (27%), Gaps = 35/395 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P Y++D+Q L           +        ++ A K +    +     Q        S
Sbjct: 63  GSPLYILDEQTLRTACRQYKQSFEEHYPGESLIVYASKAWNCLAVCAIALQEGIAIDVVS 122

Query: 60  LYEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             E+         G   + +       E+   L     I+ +   +L   +  A+     
Sbjct: 123 GGEISTAIAAGATGKMLYFHGNNKSIEELQLGLDADARIVVDNWHELKTLEQIAKDARTT 182

Query: 118 IGLRIN--PSVSYSKFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLMFHNNC 167
             + +   P +              S+ G       E        +E  N  GL  H   
Sbjct: 183 ATILVRLTPGIECHTHEYIQTGHIDSKFGFDPDQLEEVFEFIANKTEHINCIGLHAHIGS 242

Query: 168 ENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRL-KEFSE 223
           +         +   + + F     +   IE I +GGG+     +           K   E
Sbjct: 243 QIFELQPHRDLANVMMRWFQSARQYGLSIEEIDIGGGLGIRYTESDDPPSIDEWAKTVCE 302

Query: 224 KYSVQI----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271
             +               EPG +++ +      TV            V     +  +   
Sbjct: 303 SMTAACTASGLPYPKLLCEPGRSLIGSACVTAYTVGGQKCVPGIRSYVSVDGGMSDNPRP 362

Query: 272 YLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
                    +  +        T  + G+ C +GD+     +   ++ G+ +       YN
Sbjct: 363 ITYQSVYRVLAASKMSAPLSETVTLAGKHCESGDVVIHSAYLPTLESGEVLVIPATGAYN 422

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
            +  + +N +  P   + N       +R  +Y D 
Sbjct: 423 YSMSSNYNRVPRPAAVLVNQGKADLILRRETYADL 457


>gi|225570699|ref|ZP_03779722.1| hypothetical protein CLOHYLEM_06799 [Clostridium hylemonae DSM
           15053]
 gi|225160526|gb|EEG73145.1| hypothetical protein CLOHYLEM_06799 [Clostridium hylemonae DSM
           15053]
          Length = 425

 Score =  198 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 64/391 (16%), Positives = 123/391 (31%), Gaps = 29/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +  N+         N G K   A+K      + D L +Y  G   SS  
Sbjct: 20  PTPFHLYDEKGIRRNMQALRDAFSWNKGYKEYFAVKATPNPYLIDILREYGCGCDCSSYT 79

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+ML       G+   ++       E          I  + ++ +   ++    + K I 
Sbjct: 80  ELMLSEAVGATGDDIMFSSNDTPAEEFIYAEKLGAIINLDDITHIEFLEETIGYIPKTIS 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN---- 169
            R NP   +        N   S+ G   +        ++S+     G+            
Sbjct: 140 CRYNPGGLFKISNDIMDNPGDSKYGMTTEQLFEAFKILKSKGAEEFGIHAFLASNTVTNE 199

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
              +    + +   +        I++I+L GGI          +  + + +   +   + 
Sbjct: 200 YYPMLAKILFEEAVRLQKETGVHIKFINLSGGIGIPYTPDQEPNDIRIIGDGVRRVYEEV 259

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     IY E G  ++     L T  +      K  + VD+     +   +     
Sbjct: 260 LVPAGMGDVEIYTELGRFMLGPYGCLVTEAIHEKHTHKEYIGVDACAVNLMRPAMYGAYH 319

Query: 279 ATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        V++GD +   D   +  +    +
Sbjct: 320 HVTVMGREDCPCDHKYDVVGSLCENNDKFAIDRMLPKVEMGDILVIHDTGAHGFSMGYNY 379

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   DG+ + IR   +  DY+ 
Sbjct: 380 NGKLKSAELLLKEDGSAQLIRRAETPADYFA 410


>gi|37525159|ref|NP_928503.1| diaminopimelate decarboxylase [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36784585|emb|CAE13485.1| diaminopimelate decarboxylase (DAP decarboxylase) [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 436

 Score =  198 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 61/400 (15%), Positives = 120/400 (30%), Gaps = 46/400 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D + ++  ++            +  A K  +   +   + +Y     + SL E
Sbjct: 35  GTPLWVYDSETIIQKINLLCQFDV-----VRFAQKACSNTHILRLMREYGVKVDAVSLGE 89

Query: 63  VMLG-HEKFGG----ETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
           +       F          +     D      ++  D  +   ++  L +      K   
Sbjct: 90  IERALRAGFCPGQEVSDIIFTADLIDVSTLQRVTELDIPVNAGSIDMLEQIGQ--YKKGH 147

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENK 170
            + LRINP   +      +     S+ G          +KI      + GL  H      
Sbjct: 148 PVWLRINPGFGHGHSQKTNTGGENSKHGIWYQNLPQAIEKIRHYGLKLLGLHMHIGSGVD 207

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK------ 224
                S     +E+        I+ IS GGG+         +          +       
Sbjct: 208 YHHLASVCNAMVEQVI-LCGEDIQAISAGGGLSTPYHQGDERINIAHYFGLWDDARKRIE 266

Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA 279
               + +++ +EPG  +V  +  L T V  +     +N V+VD+     +   +      
Sbjct: 267 QHLGHKIELEIEPGRFLVAESGVLMTEVRAVKQMGNRNYVLVDAGFNDLMRPVMYGSYHH 326

Query: 280 TIYPNTGPYTAM--------VCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324
                               V G  C +GDIF +            PV++GD + F D  
Sbjct: 327 ISVLPADGRKIEQLPLRETLVAGPLCESGDIFTQVEGGGIAPRALPPVQVGDYLVFHDTG 386

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            Y  +  + +N   + +  +          R  +  +   
Sbjct: 387 AYGASMSSNYNSRPLISEVLFVNGKPQLIRRRQTIEELLA 426


>gi|191173213|ref|ZP_03034744.1| diaminopimelate decarboxylase [Escherichia coli F11]
 gi|300995825|ref|ZP_07181257.1| diaminopimelate decarboxylase [Escherichia coli MS 200-1]
 gi|190906464|gb|EDV66072.1| diaminopimelate decarboxylase [Escherichia coli F11]
 gi|300304680|gb|EFJ59200.1| diaminopimelate decarboxylase [Escherichia coli MS 200-1]
 gi|324011693|gb|EGB80912.1| diaminopimelate decarboxylase [Escherichia coli MS 60-1]
          Length = 420

 Score =  198 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 58/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D      +S     +   +V  L++    +  L  ++
Sbjct: 82  RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--LGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G          D I+     + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                    + +    F   ++ IS GGG+             + Y       R +    
Sbjct: 200 HLEQVCGAMVRQVL-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V++ +EPG  +V     L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVKLEIEPGRFLVAQAGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     +      +V G  C +GD+F        E      VK GD +   D   Y
Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
             +  + +N   +    + +        R  + 
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411


>gi|134105016|pdb|2O0T|A Chain A, The Three Dimensional Structure Of Diaminopimelate
           Decarboxylase From Mycobacterium Tuberculosis Reveals A
           Tetrameric Enzyme Organisation
 gi|134105017|pdb|2O0T|B Chain B, The Three Dimensional Structure Of Diaminopimelate
           Decarboxylase From Mycobacterium Tuberculosis Reveals A
           Tetrameric Enzyme Organisation
 gi|134105018|pdb|2O0T|C Chain C, The Three Dimensional Structure Of Diaminopimelate
           Decarboxylase From Mycobacterium Tuberculosis Reveals A
           Tetrameric Enzyme Organisation
 gi|134105019|pdb|2O0T|D Chain D, The Three Dimensional Structure Of Diaminopimelate
           Decarboxylase From Mycobacterium Tuberculosis Reveals A
           Tetrameric Enzyme Organisation
          Length = 467

 Score =  198 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 52/406 (12%), Positives = 122/406 (30%), Gaps = 45/406 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ID+    +           +G  +  A   F    +   +++        +  E
Sbjct: 41  GTPLFVIDEDDFRSRCRETAAAF-GSGANVHYAAXAFLCSEVARWISEEGLCLDVCTGGE 99

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F  E    +   K       AV +    I+ ++++++ +    A +    + 
Sbjct: 100 LAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQD 159

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G            +    ++   + GL  H   +
Sbjct: 160 VLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQ 219

Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F          +    G F  +    I  + LGGG+  +            L  
Sbjct: 220 IFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAA 279

Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS----- 264
                           + ++ +EPG AI    T     V  + +   +            
Sbjct: 280 KLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDG 339

Query: 265 -VEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318
            +  ++   L   +      +   +  P  A + G+ C +GDI     +    ++ GD +
Sbjct: 340 GMSDNIRTALYGAQYDVRLVSRVSDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLV 399

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +      Y  +  + +N +  P +   +       +R  + +D  +
Sbjct: 400 AVAATGAYCYSLSSRYNMVGRPAVVAVHAGNARLVLRRETVDDLLS 445


>gi|160942087|ref|ZP_02089402.1| hypothetical protein CLOBOL_06975 [Clostridium bolteae ATCC
           BAA-613]
 gi|158434978|gb|EDP12745.1| hypothetical protein CLOBOL_06975 [Clostridium bolteae ATCC
           BAA-613]
          Length = 422

 Score =  198 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 64/391 (16%), Positives = 118/391 (30%), Gaps = 29/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+YL D++ +  N          N G K   A+K      + + L     GT  SS+ 
Sbjct: 20  PTPFYLYDEKGIRENAARLKQAFSWNRGYKEYFAVKATPNPFLLNILKDMGCGTDCSSMT 79

Query: 62  EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+M+     F G    ++       E          I  + ++ +   ++    + + I 
Sbjct: 80  ELMMSRACGFSGSDIMFSSNDTPPEEFAYAEKLGAIINLDDITHIQCLEETLGHIPETIS 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK---------IESEIKNVN-GLMFHNNCEN 169
            R NP   +        N   S+ G   +             ++   ++  L  +     
Sbjct: 140 CRFNPGGLFKISNDIMDNPGDSKYGMTAEQIGQAFKILKEKGAKHFGIHAFLASNTVTNE 199

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
              +    + +   K        I +I+L GGI    +     +    + +   +   +I
Sbjct: 200 YYPMLAKILFELAVKLKEETGVHIAFINLSGGIGIPYRPDQEPNDILAIGDGVRRVYEEI 259

Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                        E G  ++     L T  +      K  V VD+     +   +     
Sbjct: 260 LVPAGMDDVALCTELGRFMMGPYGALVTKAIHEKHTYKEYVGVDACAVNLMRPAMYGAYH 319

Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                            V G  C   D F        +K GD +   D   +       +
Sbjct: 320 HITVMGREDEPCTRMYDVVGSLCENNDKFAIDRMLPEIKKGDLLFIHDAGAHGFAMGYNY 379

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   DGT++ IR   +  DY+ 
Sbjct: 380 NGKLKSAELLLKEDGTVEMIRRAETPEDYFA 410


>gi|332359129|gb|EGJ36950.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK49]
          Length = 416

 Score =  198 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 57/392 (14%), Positives = 118/392 (30%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   +S  
Sbjct: 19  PTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGCGVDCASYV 78

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++  +  F G+   ++       E         TI  +    +   K+ A        
Sbjct: 79  ELLMSQKLGFAGQDIMFSSNNTPAEEFQFARDLGATINLDAYEDVAFLKEAAGIPKVISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCEN---- 169
                 V      + D     ++ G      I++  +         G+            
Sbjct: 139 RYNPGGVFELGTSIMDNP-EEAKFGMTKDQLIQAFKELKEFGAEKFGIHAFLASNTVSND 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227
                   + +   +       ++++I+L GG+    +    ++    + +   +     
Sbjct: 198 YYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPEGEENDIAVIGQGVRQAYEAI 257

Query: 228 ---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                    +IY E G  ++     L T V    +  +  + VD+S    +   +     
Sbjct: 258 LTPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKQTYRTYLGVDASAVNLLRPAMYGSYH 317

Query: 279 A---TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                  P +      V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HITNMDRPESETEIVDVVGSLCENNDKFAINRPLPVSQIGDTLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                +  +   DG ++ IR      DY+  L
Sbjct: 378 AKLRSSEILLEQDGNVRMIRRAEKPEDYFATL 409


>gi|323188745|gb|EFZ74030.1| diaminopimelate decarboxylase [Escherichia coli RN587/1]
          Length = 420

 Score =  198 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 57/393 (14%), Positives = 115/393 (29%), Gaps = 46/393 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D      +S     +   +V  L++    +     ++
Sbjct: 82  RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G          D I+     + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                    + +    F   ++ IS GGG+             + Y       R +    
Sbjct: 200 HLEQVCGAMVRQVL-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V++ +EPG  +V     L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVKLEIEPGRFLVAQAGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     +      +V G  C +GD+F        E      VK GD +   D   Y
Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
             +  + +N   +    + +        R  + 
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNSQARLIRRRQTI 411


>gi|134301797|ref|YP_001121765.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|134049574|gb|ABO46645.1| Diaminopimelate decarboxylase [Francisella tularensis subsp.
           tularensis WY96-3418]
          Length = 394

 Score =  198 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 62/372 (16%), Positives = 119/372 (31%), Gaps = 30/372 (8%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           TP Y+ D + L +    A           ++  A+K      +     +Y  G    S  
Sbjct: 23  TPCYIYDLELLEDTFLNAKKSLDKNFKNAEIHYAIKANHNPKIVGIAKKYGMGIDCVSGG 82

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK--FKDKAQKLHKK- 117
           E+    E K   +   +    K      +  + D   FN+ S          AQ+ +K+ 
Sbjct: 83  EIKRALEQKVDSQHIVFAGVGKADWEIELAIDNDIFAFNSESLEEIQVINQIAQRKNKQV 142

Query: 118 -IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE--------IKNVNGLMFHNNCE 168
            I LR+NP++           +   + G    + +             N+ GL +H   +
Sbjct: 143 NICLRVNPNIDAQTHHYISTGQFDDKFGIAFVNILNWLKDEYRNFANINIIGLHYHVGSQ 202

Query: 169 NKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLK 219
             ++  F           K        I+ I+ GGG+                 +  R +
Sbjct: 203 ILNYQVFQSLAITTNEHIKLLRQNDINIKHINFGGGLGIDYQNPQQNPIVDFDGYFARFR 262

Query: 220 EFSEKYSV-QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQE 277
           EF E      ++ E G ++V  +  L + VL        + VI+D+ +   +   L   +
Sbjct: 263 EFFEYCDELTLHFELGRSLVGQSGVLVSQVLFNKVTQGTHFVIIDAGMTELIRPALYQAQ 322

Query: 278 S----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                             + G  C + D+F +++    +K GD ++      Y     + 
Sbjct: 323 HKIAALIDENINQKQHYHIVGPICESSDVFAKYYQLPKLKRGDLLAIYSAGAYGKVLASE 382

Query: 334 FNGINMPTIAVK 345
           +N          
Sbjct: 383 YNLRPSVQEYFI 394


>gi|104782627|ref|YP_609125.1| diaminopimelate decarboxylase [Pseudomonas entomophila L48]
 gi|95111614|emb|CAK16335.1| diaminopimelate decarboxylase [Pseudomonas entomophila L48]
          Length = 409

 Score =  198 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 58/396 (14%), Positives = 119/396 (30%), Gaps = 39/396 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P +  D Q +   +D  L         +  A K      +   + +      + SL E
Sbjct: 14  GSPLWAYDAQTIHQRIDQLLQHFD----TVRFAQKANPNLHVLRLMRERGLVLDAVSLGE 69

Query: 63  VMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-AQKLHKKI 118
           +           GE     +     +   +    DT I      ++  +    +    ++
Sbjct: 70  MERAFAAGAAVDGEPAGVVLTCDVLDQPTLARVVDTKIEVNAGSIDMLRQLGERSPGHRV 129

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCENKSF 172
            LRINP   +      +     S+ G   +   E+         ++ G+  H       +
Sbjct: 130 WLRINPGFGHGHSRKTNTGGENSKHGIWHEQLPEALACVKQFGLHLVGVHMHIGSGVD-Y 188

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF----------CQRLKEFS 222
                +   +    G     IE  S+GGG+    +                  +   E  
Sbjct: 189 QHLEQVAGAMVGLIGKLGMDIEAFSIGGGLSTPYRSDDQPVDLQRYARTWAVARAEIETM 248

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATI 281
             +SV++ +EPG  +V  +  L   V  +     K+ ++VD+     +   +        
Sbjct: 249 LGHSVRMEIEPGRYLVAESGYLVAEVRAVKQMGDKHYILVDAGFNDLMRPAMYGAYHRMS 308

Query: 282 YPNTGPYTA-------MVCGRSCLAGDIFGEFHF------EKPVKIGDRISFEDVAGYNI 328
             +             +V G  C +GD+F +             K+GD +   D   Y  
Sbjct: 309 LFDAVGRPVSRPLQPTVVAGPLCESGDVFTQNDEELTPQDLPQAKVGDLLVIHDAGAYGA 368

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +  + +N   +    +   D      R  +  +   
Sbjct: 369 SMSSNYNSRPLLPEFLIENDSLRMIRRRQTVQELLA 404


>gi|291561245|emb|CBL40044.1| Diaminopimelate decarboxylase [butyrate-producing bacterium SS3/4]
          Length = 424

 Score =  198 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 60/391 (15%), Positives = 117/391 (29%), Gaps = 29/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+YL D++ +  N          N G +   A+K      +   L +   GT  SS  
Sbjct: 20  PTPFYLYDEKGIRENALKLKEAFSWNKGFREYFAVKATPNPFILKILQELGCGTDCSSKT 79

Query: 62  EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++     F G    ++       E          I  +  + +   +     + + I 
Sbjct: 80  ELLMSDACGFSGHDIMFSSNDTPPEEFKLAYDLGAIINLDDFTHIECLEKTIGTIPETIC 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVN-GLMFHNNCEN 169
            R NP   +        N   ++ G                 ++   ++  L  +     
Sbjct: 140 CRFNPGGLFKVATDIMDNPGDAKYGMTEAQITEAYKILKAKGAKNFGIHAFLASNTVTNE 199

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
              +    + +   K        I++I+L GGI    +     +  + + E   K   + 
Sbjct: 200 YYPILAKILFELAVKLKKETGADIKFINLSGGIGIPYRPDQEPNDIKVIGESVRKVYEEV 259

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     I+ E G  ++     L T  +      K  + VD+     +   +     
Sbjct: 260 LVPAGMGDVAIFTELGRFMLAPYGALVTRAIHEKHTYKEYIGVDACAVNLMRPAMYGAYH 319

Query: 279 ATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        +  GD +   D   +       +
Sbjct: 320 HITVMGKENEPCDHKYDVTGSLCENNDKFAIDRMLPKIDKGDLLFIHDAGAHGFAMGYNY 379

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   DG+++ IR   +  DY+ 
Sbjct: 380 NGKLKSAELLLKEDGSVQMIRRAETPKDYFA 410


>gi|38233630|ref|NP_939397.1| diaminopimelate decarboxylase [Corynebacterium diphtheriae NCTC
           13129]
 gi|38199890|emb|CAE49556.1| diaminopimelate decarboxylase [Corynebacterium diphtheriae]
          Length = 442

 Score =  198 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 53/402 (13%), Positives = 117/402 (29%), Gaps = 41/402 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +++D+    +           A  K+  A K F    +   + +       +S  E
Sbjct: 38  GTPVFVVDEADFRSRCRDMAAAFGGAD-KVHYASKAFLTRRIARWVEEEGLSLDIASHGE 96

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F  +    +   KD       V +    ++ +++ +L + ++ A      + 
Sbjct: 97  LQVALRAGFPSQRITAHGNNKDRAFLQALVDARVGHVVIDSMVELERLEEIAGAAGIQQP 156

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN---------VNGLMFHNNCE 168
           + +R+ P +          +    + G                      + GL  H   +
Sbjct: 157 VMVRVKPGIEAHTHEFIATSHEDQKFGFSLASGSAYAAAARAISSESLYLIGLHCHVGSQ 216

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F      +L    +        +E + LGGG      +         + +   K
Sbjct: 217 VFDAQGFSLAAQRVLDLYSRIHRELGVDLEQLDLGGGYGIAYTEDETPLDVAAVAQDLLK 276

Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS------VEA 267
                       + +I +EPG AI   +T     V  + +                 +  
Sbjct: 277 AVQSAADEIGISAPEILVEPGRAIAGPSTVTVYEVGTVKDVHVTDRQTRRYLAVDGGMSD 336

Query: 268 HVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFED 322
           ++   L   E             P ++ V G  C +GDI          ++ GD ++   
Sbjct: 337 NIRPALYEAEYDARVINRNITGTPISSRVVGSHCESGDILINDAMLPDDIREGDLLALAA 396

Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              Y     + +N +  P +           ++  + +D   
Sbjct: 397 TGAYCFAMSSRYNMMGRPAVVSVLDGQASVMVKRENIDDLLQ 438


>gi|329955689|ref|ZP_08296597.1| diaminopimelate decarboxylase [Bacteroides clarus YIT 12056]
 gi|328526092|gb|EGF53116.1| diaminopimelate decarboxylase [Bacteroides clarus YIT 12056]
          Length = 386

 Score =  198 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 63/365 (17%), Positives = 123/365 (33%), Gaps = 26/365 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTAL-YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           ++TP+Y  D + L + L        +     +  A+K  A   +   + +   G    S 
Sbjct: 13  LRTPFYYYDTKVLRDTLACIRTEASRYENYSVHYAVKANANPKVLTIIRESGLGADCVSG 72

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115
            E+       F  +   +    K      +  + D   FN  +V +L    + A  +   
Sbjct: 73  GEIRAAIKAGFPADKIVFAGVGKADWEINLGLDYDIFCFNVESVPELEIINELAAAKGKT 132

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-----SEIKNVN--GLMFHNNCE 168
             +  RINP+V              ++ G   +D         E++NV   GL FH   +
Sbjct: 133 ANVAFRINPNVGAHTHANITTGLAENKFGISMEDMDHVIDVAQEMQNVKFIGLHFHIGSQ 192

Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-------DFCQRL 218
                 F+     +  +  +      +I  +++GGG+         +        F    
Sbjct: 193 ILDMGDFVALCNRVNELLDKLEARRIRIGHVNVGGGLGIDYGHPDRQPVPDFKSYFETYD 252

Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQE 277
                +    ++ E G ++V    +L + VL + +       + D+ +   +   L    
Sbjct: 253 NCLKLRPYQTLHFELGRSVVGQCGSLISKVLYVKQGANKQFAILDAGMTDLIRPALYQAF 312

Query: 278 S--ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                +  +    T  V G  C + D+FG+      VK GD I+      Y     + +N
Sbjct: 313 HKIENVTSDAPQQTYDVVGPICESSDVFGKAVDLNGVKRGDLIALRSAGAYGEIMASGYN 372

Query: 336 GINMP 340
              +P
Sbjct: 373 CRELP 377


>gi|323345490|ref|ZP_08085713.1| diaminopimelate decarboxylase [Prevotella oralis ATCC 33269]
 gi|323093604|gb|EFZ36182.1| diaminopimelate decarboxylase [Prevotella oralis ATCC 33269]
          Length = 385

 Score =  198 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 73/369 (19%), Positives = 130/369 (35%), Gaps = 26/369 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           IKTP+Y  D   L   L+     + K    K+  A+K  A   + + + Q   G    S 
Sbjct: 13  IKTPFYYYDTDILRETLNVIHKEVDKYENYKVHYAIKANANPKILNIICQSGFGADCVSG 72

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHK- 116
            E+       F      Y    K      +  + D   FN  ++ +L    + A+K  K 
Sbjct: 73  GEINAAISTGFPTSKIVYAGVGKSDWEINLGLDKDIFCFNVESLEELEVINELAEKKDKT 132

Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168
            KI LRINP V     +        ++ G    D           +   + GL FH   +
Sbjct: 133 AKIALRINPDVGAHTHVNIKTGLAENKFGISIIDMENVITQAASMKNIKIIGLHFHIGSQ 192

Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY------PVKDFCQRLK 219
                 F+     + ++++        ++ I++GGG+    +            +     
Sbjct: 193 ILDMGDFIALCNRINDLQEHLERNRFLVKHINVGGGLGINYEHPNREPIPDFHSYFNAYH 252

Query: 220 EFSE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL--Y 275
              + +    ++ E G ++V    +L T VL + +   K  VIVD+ +   +   L   Y
Sbjct: 253 RHLKLRDGQILHFELGRSVVGQCGSLITRVLYVKQGTHKQFVIVDAGMTDLIRPALYQAY 312

Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
            +   I  +    T  V G  C + D+F +         GD I+      Y     + +N
Sbjct: 313 HKIENISSDEKMRTYDVVGPICESSDVFAKSIDLNTTHRGDLIAIRSAGAYGEIMASQYN 372

Query: 336 GINMPTIAV 344
              +P   +
Sbjct: 373 CRKLPKGYI 381


>gi|124022700|ref|YP_001017007.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT
           9303]
 gi|123962986|gb|ABM77742.1| Diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT
           9303]
          Length = 455

 Score =  198 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 50/396 (12%), Positives = 107/396 (27%), Gaps = 34/396 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP Y++D+  L     +     +         + A K  ++  M   +     G    S
Sbjct: 48  GTPLYVLDEATLRAACQSYRGALQRHYPGPSLPIYASKANSSLMMSSLVASEGFGLDVVS 107

Query: 60  LYEVMLGHEK-FGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             E++   +    G+    +     D E+     N  TI+ +    L++           
Sbjct: 108 AGELLTALKGGVPGDCIVLHGNNKSDQELLLAYRNGVTIVADNQHDLDRLSQLVPVGADP 167

Query: 118 IGLRIN--PSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE 168
             L +   P +              S+ G             +      + GL  H   +
Sbjct: 168 ANLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQLESVLNQLLGCRWARLTGLHAHIGSQ 227

Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
                    +   +             +  +++GGG+                 +   + 
Sbjct: 228 IFELEPHQDLADVMAGALQLARRLGHPVMDLNVGGGLGVRYVSSDDPPSIDNWVKVVAEA 287

Query: 226 SVQ-----------IYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDY 272
             Q           +  EPG ++V         V         +  + VD  +  +    
Sbjct: 288 VNQACRSRNLDLPRLMCEPGRSLVAAAGVTLYRVGSRKTIPGLRTYLSVDGGMSDNPRPI 347

Query: 273 LLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
                     A    ++   T  + G+ C +GD+  +         G+ +       YN+
Sbjct: 348 TYQSLYTACLADRPLDSPDETITLVGKHCESGDVLLKDLALPYASSGEVLVVFATGAYNV 407

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +  + +N I  P   + +   +    R     D   
Sbjct: 408 SMSSNYNRIPRPAAVLVHSGHSELVQRREQPEDLLR 443


>gi|296119501|ref|ZP_06838059.1| diaminopimelate decarboxylase [Corynebacterium ammoniagenes DSM
           20306]
 gi|295967384|gb|EFG80651.1| diaminopimelate decarboxylase [Corynebacterium ammoniagenes DSM
           20306]
          Length = 445

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 58/404 (14%), Positives = 116/404 (28%), Gaps = 43/404 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP  + D+    +              ++  A K F +  +   +N+       +SL E
Sbjct: 39  GTPVMVFDEDDFRSRCRDLAEAFGGPE-RVHYASKAFLSKRIARWVNEEGLALDVASLGE 97

Query: 63  VMLGHEK-FGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           + +     F  E    +   K  +            ++ ++  +L      A K      
Sbjct: 98  LQIALAADFPAERMTVHGNNKSAKFLQACVDAKVGHVVIDSAQELELLDLIAAKAQHVQP 157

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK--DKIESEIKNVN-------GLMFHNNCE 168
           + +R+ P V          +    + G      +  E+    +        GL  H   +
Sbjct: 158 VLIRVTPGVDAHTHEFIATSHEDQKFGISLATGEAFEAVKACLRAENLTLVGLHCHVGSQ 217

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL------ 218
                 F      ++    +        ++ I LGGG       +      + +      
Sbjct: 218 VFDAEGFKLAAERIMGLYSQIHDELGYTLKEIDLGGGYGIPYTAHESALDIKAVSQDLLT 277

Query: 219 -----KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE--------NIKNLVIVDSSV 265
                 +        + +EPG A+V         V  I +          +  V VD  +
Sbjct: 278 AVANTADELGIEPPVVLVEPGRALVGAAAVTVYEVGVIKDVTTGDSATPQRRYVAVDGGM 337

Query: 266 EAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISF 320
             ++   L   E        Y +     + V G  C +GDI  +       VK GD ++ 
Sbjct: 338 SDNIRPALYGAEYDARIINRYTDGEEIPSRVVGSHCESGDILIDNIDLPNDVKAGDFLAT 397

Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
                Y+    + +N    P +           +R  +  D  +
Sbjct: 398 PATGAYSYAMGSRYNAALRPAVVAVRAGAIKPMLRRETLEDLLS 441


>gi|148548869|ref|YP_001268971.1| diaminopimelate decarboxylase [Pseudomonas putida F1]
 gi|148512927|gb|ABQ79787.1| diaminopimelate decarboxylase [Pseudomonas putida F1]
          Length = 410

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 49/398 (12%), Positives = 127/398 (31%), Gaps = 44/398 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P +  D   +   ++    +       +  A K      +   +  +     + SL E
Sbjct: 16  GSPLWAYDASTIAERVEQL-NVFD----TVRFAQKANPNLHVLRLMRAHGLVLDAVSLGE 70

Query: 63  VMLGHE------KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
           +                      A     ++ V+++   +   ++  L +  +++     
Sbjct: 71  MERAFAAGASVDGDPAGVVLTCDALDRPTLERVVASKIEVNAGSIDMLRQLGERS--PGH 128

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170
           ++ +RINP   +      +     S+ G   ++       I++   ++ G+  H      
Sbjct: 129 RVWIRINPGFGHGHSRKTNTGGENSKHGIWHEELDEALACIKAHGLHLVGVHMHIGSGVD 188

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK-- 224
            +     + +++ +        IE  S+GGG+        K   ++ + Q      ++  
Sbjct: 189 -YQHLEQVARSMIELIDRLGVDIEAFSIGGGLSTPYRSTDKPVDLQRYAQTWAVARKEIE 247

Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESA 279
               + V++ +EPG  +V  +  L   V  + +      V++D+     +   +      
Sbjct: 248 AMLGHPVRMEIEPGRFLVAESGYLVAEVRAVKQVGRNTFVMIDAGFNDLMRPAMYGAYHG 307

Query: 280 TIY-------PNTGPYTAMVCGRSCLAGDIFGEF------HFEKPVKIGDRISFEDVAGY 326
                      +      +V G  C +GD+F +             ++GD +   D   Y
Sbjct: 308 MTLLDADGQAVDRPRQPTVVAGPLCESGDVFTQDDQALTPQDLPQAQVGDLLVIHDAGAY 367

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    +          R  +  D  +
Sbjct: 368 GASMSSNYNSRPLLPEFLIENGALRMIRRRQTVQDLLS 405


>gi|193063580|ref|ZP_03044669.1| diaminopimelate decarboxylase [Escherichia coli E22]
 gi|194426152|ref|ZP_03058707.1| diaminopimelate decarboxylase [Escherichia coli B171]
 gi|260845501|ref|YP_003223279.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli
           O103:H2 str. 12009]
 gi|192930857|gb|EDV83462.1| diaminopimelate decarboxylase [Escherichia coli E22]
 gi|194415460|gb|EDX31727.1| diaminopimelate decarboxylase [Escherichia coli B171]
 gi|257760648|dbj|BAI32145.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli
           O103:H2 str. 12009]
 gi|320202479|gb|EFW77049.1| Diaminopimelate decarboxylase [Escherichia coli EC4100B]
          Length = 420

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 57/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D      +S     +   +V  L++    +     ++
Sbjct: 82  RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGLVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G          D I+     + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                    + +    F   ++ IS GGG+             + Y       R +    
Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     +      +V G  C +GD+F        E      VK GD +   D   Y
Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
             +  + +N   +    + +        R  + 
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411


>gi|304407007|ref|ZP_07388661.1| diaminopimelate decarboxylase [Paenibacillus curdlanolyticus YK9]
 gi|304343994|gb|EFM09834.1| diaminopimelate decarboxylase [Paenibacillus curdlanolyticus YK9]
          Length = 443

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 59/400 (14%), Positives = 121/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++D+  +       +   +  G   ++  A K F+   M     Q        S 
Sbjct: 32  GTPLYIVDEAFVRQRAREFVEAFRATGLKFQVAYASKAFSVMAMCAIAEQENLSLDVVSD 91

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F  E   ++   K  E    A+ +     + +   +++     A  +   
Sbjct: 92  GELYTALQAGFPVERIHFHGNNKTPEEINMAIDAGIGCFVVDNFVEMSLLNALAADKGKT 151

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
             + LRI P V           +  S+ G            ++ ++    N+ G+  H  
Sbjct: 152 VNVLLRITPGVEAHTHDFISTGQQDSKFGFDLGNGTAFRAIEETLKLGNLNLLGVHSHIG 211

Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDF-------- 214
            +      F   +  + K               I++GGG      +              
Sbjct: 212 SQIFEVDGFGMAVDKVAKFAVKVRDELGKTFSVINVGGGFGIRYVEGDSPLPLSTYVNAI 271

Query: 215 CQRLKEFS---EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
              +          + +I++EPG ++V +  T   T+    E       +     +  + 
Sbjct: 272 ADAIISNFTAANYPTPEIWIEPGRSMVGDAGTTLYTIGTHKEIPGVRKYIAVDGGMTDNP 331

Query: 270 PDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   +  N        T  V G++C +GD+          + GD ++      
Sbjct: 332 RPALYGSKYEAVLANRANAANEETVTVAGKACESGDMLIWDLELPKSESGDLLAVFCTGA 391

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           YN    + +N I  P +           ++  +  D   N
Sbjct: 392 YNYAMASNYNRIRRPAVVFVKDGEASLVVKRETLEDIVVN 431


>gi|311898369|dbj|BAJ30777.1| putative diaminopimelate decarboxylase [Kitasatospora setae
           KM-6054]
          Length = 463

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 68/398 (17%), Positives = 123/398 (30%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+         A      AG  +  A K F +  +   L++        S  E
Sbjct: 63  GTPAYVMDEAD-FRARARAWRDAFGAGADVYYAGKAFLSKAVVRWLHEEGLNVDVCSSGE 121

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           + +       GE  A +   K       AV +    I+ ++  ++ +    A  Q + + 
Sbjct: 122 LHVALAAGMPGERIALHGNNKSVGELEQAVKAGVGHIVVDSFQEIERLAAIADAQGVRQP 181

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
           + +RI   V               + G         E  +  +      + G+  H   +
Sbjct: 182 VLIRITVGVEAHTHEFIATAHEDQKFGLSLSGGLAAEAVRRVLARPSLELRGIHSHIGSQ 241

Query: 169 NKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
              F  F    + +             ++  I LGGG+               +      
Sbjct: 242 IFDFAGFEVAARRVVGLLAEVRDEHGVELPEIDLGGGLGIAYTAEDDPREPAEIAASLTD 301

Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDIS--ENIKNLVIVDSSVEAHVPD 271
                         +I +EPG AIV  T      V  +   E ++  V VD  +  ++  
Sbjct: 302 IVRRECAAAELTPPRISVEPGRAIVGPTAFTLYEVGTVKALEGLRTYVSVDGGMSDNIRT 361

Query: 272 YLLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326
            L   E +    +      P  A V G+ C +GDI  +  F    +  GD I+      Y
Sbjct: 362 ALYDAEYSVALVSRTSAAEPMLARVVGKHCESGDIVVKDAFLPADLAPGDLIAVPATGAY 421

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N    P +           +R  +  D   
Sbjct: 422 CRSMASNYNHALKPPVLAVADGAARVIVRRETEEDLLR 459


>gi|323966820|gb|EGB62251.1| diaminopimelate decarboxylase [Escherichia coli M863]
 gi|327251586|gb|EGE63272.1| diaminopimelate decarboxylase [Escherichia coli STEC_7v]
          Length = 420

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 56/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGH-EKFGG----ETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                 +      +   +     D      +S     +   +V  L++    +     ++
Sbjct: 82  RALVAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G          + I+     + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALELIQRHHLQLVGVHMHIGSGVDYA 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                    + +    F   ++ IS GGG+             + Y       R +    
Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V++ +EPG  +V     L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVKLEIEPGRFLVAQAGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     +      +V G  C +GD+F        E      VK GD +   D   Y
Sbjct: 319 ALASDGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
             +  + +N   +    + +        R  + 
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411


>gi|323172859|gb|EFZ58490.1| diaminopimelate decarboxylase [Escherichia coli LT-68]
          Length = 420

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 57/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D      +S     +   +V  L++    +     ++
Sbjct: 82  RASAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G          D I+     + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                    + +    F   ++ IS GGG+             + Y       R +    
Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LDHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     +      +V G  C +GD+F        E      VK GD +   D   Y
Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
             +  + +N   +    + +        R  + 
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411


>gi|183596304|ref|ZP_02958332.1| hypothetical protein PROSTU_00039 [Providencia stuartii ATCC 25827]
 gi|188023908|gb|EDU61948.1| hypothetical protein PROSTU_00039 [Providencia stuartii ATCC 25827]
          Length = 419

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 60/400 (15%), Positives = 124/400 (31%), Gaps = 46/400 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   ++  ++            +  A K  +   +   + +      S SL E
Sbjct: 25  GTPVWVYDSSVIIERINQLK-----PFDTVRFAQKACSNIHILRLMREQGVKVDSVSLGE 79

Query: 63  VMLGH-----EKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
           +                  +     D    A ++  D  +   ++  L++  +  QK   
Sbjct: 80  IERALVAGFQAGRENSEIVFTADVLDRATLARVTELDIPVNAGSIDMLSQIGE--QKSGH 137

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170
            + LRINP   +      +     S+ G   +D       I     ++ GL  H      
Sbjct: 138 PVWLRINPGFGHGHSQKTNTGGENSKHGIWYQDLPKALEQIRRYNLSLVGLHMHIGSGVD 197

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL-------KEFSE 223
            +   + +   + ++       I+ IS GGG+    ++       Q         ++  E
Sbjct: 198 -YQHLANVCDAMVEQVISSNADIQAISAGGGLSTPYREQDEVIDIQHYYSLWNTARQRIE 256

Query: 224 KYSVQIY---LEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA 279
           ++        +EPG  +V  +  L   V  +     ++ V+VDS     +   +      
Sbjct: 257 RHLGHSIELEIEPGRYLVAESGVLLAEVRAVKTMGSRHYVLVDSGFNDLMRPAMYGSYHH 316

Query: 280 TIYPNTGP--------YTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVA 324
                              +V G  C +GD+F        E      V++GD + F D  
Sbjct: 317 ISVLPAEGRSLENVPLKETIVAGPLCESGDVFTQQEGGMVETRLLPDVQVGDYLVFHDTG 376

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            Y  +  + +N   +    +          R  +  +   
Sbjct: 377 AYGASMSSNYNSRPLLPEVLLIEGTPKLIRRRQTIEELLA 416


>gi|324993658|gb|EGC25577.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK405]
 gi|324995030|gb|EGC26943.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK678]
 gi|327474531|gb|EGF19936.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK408]
          Length = 416

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 56/392 (14%), Positives = 117/392 (29%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   +S  
Sbjct: 19  PTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGCGVDCASYV 78

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++  +  F G+   ++       E         TI  +    +   K+ A        
Sbjct: 79  ELLMSQKLGFAGQDIMFSSNNTPAEEFQFARDLGATINLDAYEDVAFLKEAAGIPKIISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCEN---- 169
                 V      + D     ++ G      I++  +         G+            
Sbjct: 139 RYNPGGVFELGTSIMDNP-EEAKFGMTKDQLIQAFKELKELGAEKFGIHAFLASNTVSND 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227
                   + +   +       ++++I+L GG+    +    ++    + +   +     
Sbjct: 198 YYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPEGEENDIAVIGQGVRQAYEAI 257

Query: 228 ---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                    +IY E G  ++     L T V    +  +  + VD+S    +   +     
Sbjct: 258 LTPAGLGQVKIYTELGRFMLAPYGLLVTNVTHKKQTYRTYLGVDASAVNLLRPAMYGSYH 317

Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                +          V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HITNMDRPEGETEIVDVVGSLCENNDKFAINRPLPVSQIGDTLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                +  +   DG ++ IR      DY+  L
Sbjct: 378 AKLRSSEILLEQDGNVRMIRRAEKPEDYFATL 409


>gi|125718586|ref|YP_001035719.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK36]
 gi|125498503|gb|ABN45169.1| Diaminopimelate decarboxylase, putative [Streptococcus sanguinis
           SK36]
          Length = 416

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 57/392 (14%), Positives = 117/392 (29%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   +S  
Sbjct: 19  PTPFHLYDEEGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGCGVDCASYV 78

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++  +  F G+   ++       E         TI  +    +   K+ A        
Sbjct: 79  ELLMSQKLGFVGQDIMFSSNNTPAEEFQFARDLGATINLDAYEDVAFLKEAAGIPKIISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCEN---- 169
                 V      + D     ++ G      I++  +         G+            
Sbjct: 139 RYNPGGVFELGTSIMDNP-EEAKFGMTKDQLIQAFKELKELGAEKFGIHAFLASNTVSND 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227
                   + +   +       ++++I+L GG+    +    ++    + +   +     
Sbjct: 198 YYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPEGEENDIAVIGQGVRQAYEAI 257

Query: 228 ---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                    +IY E G  ++     L T V    +  +  + VD+S    +   +     
Sbjct: 258 LTPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKQTYRTYLGVDASAVNLLRPAMYGSYH 317

Query: 279 A---TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                  P        V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HITNMDRPMGETEIVDVVGSLCENNDKFAINRPLPVSQIGDTLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                +  +   DG ++ IR      DY+  L
Sbjct: 378 AKLRSSEILLEQDGNVRMIRRAEKPEDYFATL 409


>gi|325274551|ref|ZP_08140611.1| diaminopimelate decarboxylase [Pseudomonas sp. TJI-51]
 gi|324100310|gb|EGB98096.1| diaminopimelate decarboxylase [Pseudomonas sp. TJI-51]
          Length = 410

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 50/398 (12%), Positives = 124/398 (31%), Gaps = 44/398 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P +  D   +   ++    +       +  A K      +   +  +     + SL E
Sbjct: 16  GSPLWAYDTGTIAERVEQLK-VFD----TVRFAQKANPNLHVLRLMRGHGLVLDAVSLGE 70

Query: 63  VMLGHE------KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
           +                      A     ++ V++    +   ++  L +  +++     
Sbjct: 71  MERAFAAGASVQGDPAGVVLTCDALDRPTLERVVAEKIEVNAGSIDMLRQLGERS--PGH 128

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170
           ++ +RINP   +      +     S+ G   +        I++   ++ G+  H      
Sbjct: 129 RVWVRINPGFGHGHSRKTNTGGENSKHGIWHEQLDEALGVIKAHGLHLVGVHMHIGSGVD 188

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK-- 224
            +     + +++ +  G     IE  S+GGG+        K   ++ + Q      ++  
Sbjct: 189 -YQHLEQVARSMIELVGRLGVDIEAFSIGGGLSTPYRSSDKPVDLQRYAQTWAVARKEIE 247

Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESA 279
               + V++ +EPG  +V     L   V  + +      V++D+     +   +      
Sbjct: 248 AMLGHPVRMEIEPGRFLVAECGYLVAEVRAVKQVGRNTFVMIDAGFNDLMRPAMYGAYHG 307

Query: 280 TIYPNTGPYTAM-------VCGRSCLAGDIFGEF------HFEKPVKIGDRISFEDVAGY 326
               +              V G  C +GD+F +             ++GD +   D   Y
Sbjct: 308 MTLLDANGQPVERPRQPTVVAGPLCESGDVFTQDDQELTPQDLPQAQVGDLLVIHDAGAY 367

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    +          R  +  D  +
Sbjct: 368 GASMSSNYNSRPLLPEFLIENGALRMIRRRQTVQDLLD 405


>gi|322387089|ref|ZP_08060700.1| diaminopimelate decarboxylase [Streptococcus infantis ATCC 700779]
 gi|321142076|gb|EFX37570.1| diaminopimelate decarboxylase [Streptococcus infantis ATCC 700779]
          Length = 417

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 60/392 (15%), Positives = 115/392 (29%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   SS  
Sbjct: 19  PTPFHLYDEKGIREKARAVNEAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78

Query: 62  EVMLGHE-KF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++ H+  F G E    +    D E         TI  +    ++  +  A        
Sbjct: 79  ELLMSHKLGFTGAEMMFSSNNTPDQEYAYARELGATINLDAFEDIDHLECAAGIPEIISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169
                 V      + D     ++ G   +   E+         +   ++  L  +     
Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKEQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                   + +   +        +++I+L GGI    +     +    + E   +   + 
Sbjct: 198 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEPNDIALIGEGVRRVYEEV 257

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     I+ E G  ++     L T V    +  +  + VD+S    +   +     
Sbjct: 258 LTPAGLGQVKIFTELGRFMLAPHGILVTKVTHKKKTYRTYLGVDASAVNLMRPAMYGAYH 317

Query: 279 ATIYPNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                           V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HITNMMNPGGQTEVVDVVGSLCENNDKFAVNRELPQTEIGDLLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                   +   DG  + IR      DY+  L
Sbjct: 378 AKLRSAEILYTEDGGARLIRRAERPEDYFATL 409


>gi|288926151|ref|ZP_06420078.1| diaminopimelate decarboxylase [Prevotella buccae D17]
 gi|288337043|gb|EFC75402.1| diaminopimelate decarboxylase [Prevotella buccae D17]
          Length = 386

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 67/368 (18%), Positives = 126/368 (34%), Gaps = 28/368 (7%)

Query: 4   TPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           TP+Y  D + L   L +      ++ G  +  A+K  A   + + + Q   G    S  E
Sbjct: 16  TPFYYYDTELLRRTLKSINDEAARHDGFVVHYAVKANANPKVLNVICQAGLGADCVSGGE 75

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHKKIG 119
           +       F      +    K      +  + D   FN  ++ +L    + A +      
Sbjct: 76  IEAALRAGFPAAKTVFAGVGKSDWEINLALDKDIFCFNVESIPELEIINELAARKGTTAR 135

Query: 120 --LRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCEN- 169
              RINP++              ++ G   +D           E     GL FH   +  
Sbjct: 136 VAFRINPNIGAHTHANITTGLAENKFGIALEDMDSVIERAATLEHVAFVGLHFHIGSQIL 195

Query: 170 --KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
               F      + +++    H   ++E +++GGG+      +P +      K + + Y+ 
Sbjct: 196 DMGDFKALCNRINDLQAHLEHRHIRLEHLNVGGGLGIDY-HHPNRVPVPDFKAYFDTYAR 254

Query: 228 QI--------YLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL--YQ 276
            +        + E G A+V    TL T  L + +   K   IVD+ +   +   L   Y 
Sbjct: 255 HLKLREGQRLHFELGRAVVGQMGTLITRTLYVKQGAAKQFAIVDAGMTDLIRPALYQAYH 314

Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
           +   +     P T  V G  C + D+F +         GD ++      Y     + +N 
Sbjct: 315 KIENLSSQEPPETYDVVGPICESSDVFAKAVDLNKAHRGDLMAIRSAGAYGEIMASGYNC 374

Query: 337 INMPTIAV 344
             +P   +
Sbjct: 375 RQLPAGYI 382


>gi|70729686|ref|YP_259425.1| diaminopimelate decarboxylase [Pseudomonas fluorescens Pf-5]
 gi|68343985|gb|AAY91591.1| diaminopimelate decarboxylase [Pseudomonas fluorescens Pf-5]
          Length = 410

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 53/396 (13%), Positives = 117/396 (29%), Gaps = 42/396 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +  D   +   +             +  A K  +   +   + +      + SL E
Sbjct: 18  GTPLWCYDAATIQARIAQLQ-AFDV----VRYAQKASSNLHLLRLIREAGVRVDAVSLGE 72

Query: 63  VMLGH-EKFGGET--HAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           +       F        +    + +  +  V+     +   ++  L +  +K+     ++
Sbjct: 73  IERALLAGFSPVDAGIVFTCDLFDEATLARVVELQVEVNAGSIDMLRQLGEKS--PGHRV 130

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKSF 172
            LRINP   +      +     S+ G            I     ++ GL  H       +
Sbjct: 131 WLRINPGFGHGHSRKTNTGGENSKHGIWHDQMSEALAVIRQHGLHLVGLHMHIGSGVD-Y 189

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFSEK---- 224
                +   +          +E  S+GGG+    +       V+ +    K   ++    
Sbjct: 190 DHLEQVGAAMVAAVKSLDHDLEAFSIGGGLSTPYREGDTPVDVQRYANAWKVARQEIEAY 249

Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATI 281
             + V++ +EPG  +V     L + V  +    ++  + VD+     +   +        
Sbjct: 250 LGHGVRMEIEPGRFLVAEAGCLVSEVRVVKTAGQHHFVLVDTGFNDLMRPAMYGAYHGMS 309

Query: 282 YPNTGPYTAM-------VCGRSCLAGDIFGEF------HFEKPVKIGDRISFEDVAGYNI 328
             +   +          V G  C +GDIF +             ++GD +   D   Y  
Sbjct: 310 LLDAAGHPVERPQQLTVVGGPLCESGDIFTQDDECLTPRPLPQARVGDLLVLHDTGAYGA 369

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +  + +N   +    +          R     D   
Sbjct: 370 SMSSNYNSRPLLPEVLFENGQPKLIRRRQPLADLLA 405


>gi|291531190|emb|CBK96775.1| Diaminopimelate decarboxylase [Eubacterium siraeum 70/3]
          Length = 423

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 55/393 (13%), Positives = 113/393 (28%), Gaps = 30/393 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           I TP+++ D++ +             N G +   A+K      + + L +   G   SS 
Sbjct: 19  IPTPFHIYDEKGIRETARKLYDAFSWNKGFREYFAVKATPNPYIMEILKEEGCGFDCSSY 78

Query: 61  YEVMLGHEKFGG--ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-K 117
            E+ML  +      +    + A  D +          I  +  + ++             
Sbjct: 79  TELMLSDKVGAKQHDIMFSSNATPDEDFKLAYKLGAIINLDDFTHIDVLDKLTGIPETIC 138

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCENKS 171
                      S+          ++ G   +  IE+            G+         +
Sbjct: 139 CRYNPGGEFKTSEKGNVMDTPKDAKYGMTHEQIIEAYKILKEKGAKRFGMHAFLASNTLT 198

Query: 172 FLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
              +      + +   +       Q+ +I+L GG+    K     +  + + E   K   
Sbjct: 199 NEYYPVLAGILFRTAVEIKEKTGVQLSFINLSGGVGVPYKPDQPANDIKVIGEGVRKAYE 258

Query: 228 QI-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ 276
           +I           + E G  ++     L    +      K  + +D+     +   +   
Sbjct: 259 EILVPAGMGDVAIFTELGRYMLAPNGALVAKAIREKHIYKEYIGLDACAANLMRPAIYGA 318

Query: 277 ESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                          +   + G  C   D F        + IGD I   D   +  +   
Sbjct: 319 YHHITVMGKENQPCDHKYDITGGLCENCDKFAVDRMLPKIDIGDIIYIHDTGAHGFSMGY 378

Query: 333 WFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
            +NG       +   DG+ K IR   +  DY+ 
Sbjct: 379 NYNGKLRSAEVLLKEDGSFKLIRRAETPKDYFA 411


>gi|220910057|ref|YP_002485368.1| diaminopimelate decarboxylase [Cyanothece sp. PCC 7425]
 gi|219866668|gb|ACL47007.1| diaminopimelate decarboxylase [Cyanothece sp. PCC 7425]
          Length = 458

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 47/396 (11%), Positives = 108/396 (27%), Gaps = 34/396 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P Y++D+  L           K       ++L A K +        +     G   +S
Sbjct: 54  GSPLYILDETTLRQGCQHYQQGMKQFYPGDFQVLYASKAWNCLATCAIVASEGLGIDVAS 113

Query: 60  LYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKK 117
             E+          +   ++   K      +       I+ +   +L +    A +    
Sbjct: 114 GGELYTALQAGVNPDKIYFHGNNKSLTELELALGNGCAIVADNWLELQRLATLADQFPSP 173

Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-----SEIKNVNGLMFHNNCENK 170
               LR+ P +              ++ G             S+   ++ L FH +  ++
Sbjct: 174 PRVMLRLTPGIECHTHEYIRTGHLDNKFGFDPNQLEPLLEFASKHPQIHWLGFHAHIGSQ 233

Query: 171 SFLCFSAM-----LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL------- 218
            F           L +   +       +  +++GGG+     +                 
Sbjct: 234 IFELQPHTDLSAVLVDWLVQAKAAGLGMNELNVGGGLGIRYLESDQPPSITEWVKTVTTG 293

Query: 219 ----KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDY 272
                +       ++  EPG ++V         +    +       V     +  +    
Sbjct: 294 IIAACQSRNLPLPKLLCEPGRSLVGPAGLTAYRMGGRKDVPGIRTYVAVDGGMSDNPRPI 353

Query: 273 LLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
                   +  N        T  + G+ C +GD+  +       +  D         YN 
Sbjct: 354 TYQAVYRAVVGNHMAAPLAETVTIAGKHCESGDVLIKDIQLPATQPDDIFVVLTTGAYNY 413

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +  + +N +  P   +         +R  +Y+D   
Sbjct: 414 SMASNYNRLTRPAAVLVKEGEANLILRRETYSDLLR 449


>gi|300923176|ref|ZP_07139232.1| diaminopimelate decarboxylase [Escherichia coli MS 182-1]
 gi|301326168|ref|ZP_07219554.1| diaminopimelate decarboxylase [Escherichia coli MS 78-1]
 gi|300420536|gb|EFK03847.1| diaminopimelate decarboxylase [Escherichia coli MS 182-1]
 gi|300847133|gb|EFK74893.1| diaminopimelate decarboxylase [Escherichia coli MS 78-1]
          Length = 420

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 57/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D      +S     +   +V  L++    +     ++
Sbjct: 82  RALAAGYNPQTHPDDIVFTADVIDKATLERVSELQIPVNAGSVDMLDQLGLVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G          D I+     + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                    + +    F   ++ IS GGG+             + Y       R +    
Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     +      +V G  C +GD+F        E      VK GD +   D   Y
Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
             +  + +N   +    + +        R  + 
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411


>gi|281423178|ref|ZP_06254091.1| diaminopimelate decarboxylase [Prevotella oris F0302]
 gi|281402514|gb|EFB33345.1| diaminopimelate decarboxylase [Prevotella oris F0302]
          Length = 386

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 64/366 (17%), Positives = 121/366 (33%), Gaps = 26/366 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTAL-YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           + TP+Y  D + L   L        K++   +  A+K  A   +   +++   G    S 
Sbjct: 14  LSTPFYYYDTELLRRTLTEIKTEANKHSNYIVHYAIKANANTKLLKIIHEAGLGADCVSG 73

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHK- 116
            E+    E  F      Y    K      +  + +   FN  ++ +L    + A    K 
Sbjct: 74  GEINAALEAGFPAFEIVYAGVGKSDWEINLGLDNEIFCFNVESIPELEVINELAGTKGKV 133

Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168
             +  RINP V              ++ G   +D        +  +     GL FH   +
Sbjct: 134 ANVAFRINPDVGAHTHSSITTGLAENKFGIAMRDMESIINHALHMKHVKFIGLHFHIGSQ 193

Query: 169 NKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ-------RL 218
                 F+     + +++ +       +  I++GGG+    +                  
Sbjct: 194 ILDMSDFVALCRRINDLQNQLDQHGISVRHINVGGGLGIDYEHPDKSSIPDFKAYFDTYA 253

Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLY-- 275
           K    ++  Q++ E G A+V    +L T  L + + + K   IVD+ +   +   L    
Sbjct: 254 KYLKLRHGQQLHFELGRAVVGQCGSLITRTLYVKQGDTKQFAIVDAGMTELIRPALYQAV 313

Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
            +   I  N       V G  C   D+F +         GD ++      Y     + +N
Sbjct: 314 HKIENISSNRPTEIYDVVGPICETSDVFAKDVLLNKTYRGDLLAIRSAGAYGEIMASQYN 373

Query: 336 GINMPT 341
              +P 
Sbjct: 374 CRKLPK 379


>gi|167747269|ref|ZP_02419396.1| hypothetical protein ANACAC_01983 [Anaerostipes caccae DSM 14662]
 gi|167653247|gb|EDR97376.1| hypothetical protein ANACAC_01983 [Anaerostipes caccae DSM 14662]
          Length = 416

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 59/391 (15%), Positives = 111/391 (28%), Gaps = 30/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   GT  SSL 
Sbjct: 20  PTPFHLYDEKGIRETARNLNKAFSWNKGFKEYFAVKATPNPTILKILKEEGCGTDCSSLT 79

Query: 62  EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+M+     F G    ++       E         TI  + ++ ++  K+ A        
Sbjct: 80  ELMMSDRCGFDGSEIMFSSNDTPAEEFVLAKKLGATINLDDITHIDFLKEAAGIPEVISC 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKD----KIESEIKNVNGLMFH------NNCEN 169
                 V      + D     ++ G          ++ +   V     H           
Sbjct: 140 RYNPGGVFSLGTDIMDNPG-DAKYGMTRAQMTEAFLKLKELGVKEFGIHSFLASNTVTNE 198

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                   + +   +        I +I+L GG+          +    + E   K   + 
Sbjct: 199 YYPTLAKQLFELAVELQKETGVHIGFINLSGGVGVPYLPDQEGNDIAVIGEGVHKAFDEV 258

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     I+ E G  ++     L T  +      K  + VD+     +   +     
Sbjct: 259 LVPAGMGDVKIFTELGRYMLAPNGHLVTKAIHEKHTHKEYIGVDACAVNLMRPAMYGAYH 318

Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                            + G  C   D F        ++ GD +   D   +       +
Sbjct: 319 HITVVGKENEPCDHMYDITGSLCENNDKFAIDRKLPEIENGDLLVIHDTGAHGFAMGYNY 378

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   DG+ + IR   +  DY+ 
Sbjct: 379 NGKLKSAEILLKEDGSTEMIRRAETPEDYFA 409


>gi|332362247|gb|EGJ40047.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK1056]
          Length = 416

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 57/392 (14%), Positives = 120/392 (30%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   +S  
Sbjct: 19  PTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGCGVDCASYV 78

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++  +  F G+   ++       E         TI  +    +   K+ A        
Sbjct: 79  ELLMSQKLGFAGQDIMFSSNNTPAEEFQFARDLGATINLDAYEDVAFLKESAGIPKIISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169
                 V      + D     ++ G      I++         E   ++  L  +    +
Sbjct: 139 RYNPGGVFELGTSIMDNP-EEAKFGMTKDQLIQAFKELKELGAEKFGIHAFLSSNTVSND 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227
                   + +   +       ++++I+L GG+    +    ++    + +   +     
Sbjct: 198 YYPELARQLFELAVEVVAETGVKLDFINLSGGVGINYQPDGEENDIAVIGQGVRQAYEAI 257

Query: 228 ---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                    +IY E G  ++     L T V    +  +  + VD+S    +   +     
Sbjct: 258 LTPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKQTYRTYLGVDASAVNLLRPAMYGSYH 317

Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                +          V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HITNMDRSESETEIVDVVGSLCENNDKFAINRPLPVSQIGDTLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                +  +   DG ++ IR      DY+  L
Sbjct: 378 AKLRSSEILLEQDGNVRMIRRAEKPEDYFATL 409


>gi|317471013|ref|ZP_07930390.1| diaminopimelate decarboxylase [Anaerostipes sp. 3_2_56FAA]
 gi|316901524|gb|EFV23461.1| diaminopimelate decarboxylase [Anaerostipes sp. 3_2_56FAA]
          Length = 416

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 59/391 (15%), Positives = 111/391 (28%), Gaps = 30/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   GT  SSL 
Sbjct: 20  PTPFHLYDEKGIRETARNLNKAFSWNKGFKEYFAVKATPNPTILKILKEEGCGTDCSSLT 79

Query: 62  EVMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+M+     F G    ++       E         TI  + ++ ++  K+ A        
Sbjct: 80  ELMMSDRCGFDGSEIMFSSNDTPAEEFVLAKKLGATINLDDITHIDFLKEAAGIPEVISC 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKD----KIESEIKNVNGLMFH------NNCEN 169
                 V      + D     ++ G          ++ +   V     H           
Sbjct: 140 RYNPGGVFSLGTDIMDNPG-DAKYGMTRAQMTEAFLKLKELGVKEFGIHSFLASNTVTNE 198

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                   + +   +        I +I+L GG+          +    + E   K   + 
Sbjct: 199 YYPTLAKQLFELAVELQKETGVHIGFINLSGGVGVPYLPDQEGNDIAVIGEGVHKAFDEV 258

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     I+ E G  ++     L T  +      K  + VD+     +   +     
Sbjct: 259 LVPAGMGDVKIFTELGRYMLAPNGHLVTKAIHEKHTHKEYIGVDACAVNLMRPAMYGAYH 318

Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                            + G  C   D F        ++ GD +   D   +       +
Sbjct: 319 HITVVGKENEPCDHMYDITGSLCENNDKFAIDRKLPEIENGDLLVIHDTGAHGFAMGYNY 378

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   DG+ + IR   +  DY+ 
Sbjct: 379 NGKLKSAEILLKEDGSTEMIRRAETPEDYFA 409


>gi|323160019|gb|EFZ45983.1| diaminopimelate decarboxylase [Escherichia coli E128010]
          Length = 420

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 56/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     +      +S     +   +V  L++    +     ++
Sbjct: 82  RALAAGYNPQTHPDDIVFTADVIEQATLERVSELQIPVNAGSVDMLDQLGLVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G          D I+     + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                    + +    F   ++ IS GGG+             + Y       R +    
Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     +      +V G  C +GD+F        E      VK GD +   D   Y
Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
             +  + +N   +    + +        R  + 
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411


>gi|257871090|ref|ZP_05650743.1| diaminopimelate decarboxylase [Enterococcus gallinarum EG2]
 gi|257805254|gb|EEV34076.1| diaminopimelate decarboxylase [Enterococcus gallinarum EG2]
          Length = 434

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 61/400 (15%), Positives = 126/400 (31%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+    ++             +    +   A K F    M   +++        S 
Sbjct: 25  GTPLYVFSVTEIRTQCRAIREEFLSRYENTRAAYASKAFNTLAMLRLIDEEGLSLDVVSG 84

Query: 61  YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E   +N   K  D    A+      II +   ++   +   Q+  +K
Sbjct: 85  GELYTAIQAGFPAEQIEFNGNNKSIDELALAIDYGVGRIIVDGSQEIGLIRALCQEKQRK 144

Query: 118 IGLR--INPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
             +   I P V+          +  S+ G            ++ I++   +  GL FH  
Sbjct: 145 AKVMFRITPEVNVQTHAFISTGQKDSKFGIPLDEEILFPLIEEVIDAPEIDFYGLHFHIG 204

Query: 167 CE----NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGI-----------HFTDKDYPV 211
            +    +       A L  + +    F   ++ +++GGG             ++    PV
Sbjct: 205 SQLSDNHSHIAATEAALALVLEIHHRFDYTVKELNVGGGFGVRYTEKDIRQPYSYFLDPV 264

Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269
               +   +  +     + +EPG +IV        T+  I    +      +D  +  ++
Sbjct: 265 MATIETFCQAHQLQRPTVVIEPGRSIVAEAGISLHTIGTIKTLPQIRTYASIDGGMTDNI 324

Query: 270 PDYLLYQESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   E   I  N        T  + G++C + DI  +      V+ GD  +      
Sbjct: 325 RPGLYQAEYTGILANRAAEAATETVTISGKACESTDILVKDLQLPKVETGDLFATFATGA 384

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  + +N + +P +           +   ++     N
Sbjct: 385 YGYSMASNYNKLAIPAVVFVEKGHAELVVERQTFQQLIQN 424


>gi|167032598|ref|YP_001667829.1| diaminopimelate decarboxylase [Pseudomonas putida GB-1]
 gi|166859086|gb|ABY97493.1| diaminopimelate decarboxylase [Pseudomonas putida GB-1]
          Length = 410

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 50/398 (12%), Positives = 127/398 (31%), Gaps = 44/398 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P +  D   +   ++    +       +  A K      +   +  +     + SL E
Sbjct: 16  GSPLWAYDTGTIAERVEQLK-VFD----TVRFAQKANPNLHVLRLMRAHGLVLDAVSLGE 70

Query: 63  VMLGHE------KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
           +                      A     ++ V+++   +   ++  L +  +++     
Sbjct: 71  MERAFAAGASVGGDPAGVVLTCDALDRPTLERVVASKIEVNAGSIDMLRQLGERS--PGH 128

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170
           ++ +RINP   +      +     S+ G   ++       I++   ++ G+  H      
Sbjct: 129 RVWIRINPGFGHGHSRKTNTGGENSKHGIWHEELDEALACIKAHGLHLVGVHMHIGSGVD 188

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK-- 224
            +     + +++ +  G     IE  S+GGG+        K   ++ + Q      ++  
Sbjct: 189 -YQHLEQVARSMIELIGRLGVDIEAFSIGGGLSTPYRKTDKPVDLQRYAQTWAVARKEIE 247

Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESA 279
               + V++ +EPG  +V  +  L   V  + +      V++D+     +   +      
Sbjct: 248 AMLGHPVRMEIEPGRFLVAESGYLVAEVRAVKQVGRNTFVMIDAGFNDLMRPAMYGAYHG 307

Query: 280 TIYPNTGPYTAM-------VCGRSCLAGDIFGEF------HFEKPVKIGDRISFEDVAGY 326
               +              V G  C +GD+F +             ++GD +   D   Y
Sbjct: 308 MTLLDANGQPVDRPRQPTVVAGPLCESGDVFTQDDQELTPQELPQAQVGDLLVIHDAGAY 367

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    +          R  +  D  +
Sbjct: 368 GASMSSSYNSRPLLPEFLIEDGALRMIRRRQTVQDLLD 405


>gi|309800151|ref|ZP_07694337.1| carboxynorspermidine decarboxylase [Streptococcus infantis SK1302]
 gi|308116198|gb|EFO53688.1| carboxynorspermidine decarboxylase [Streptococcus infantis SK1302]
          Length = 360

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 109/317 (34%), Positives = 166/317 (52%), Gaps = 6/317 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +  P Y+ID  KL  N      +++ AG K+LLA K ++ +  +  ++QY+ GTT+S LY
Sbjct: 6   VPAPAYVIDLAKLEENCSILQEVQEKAGCKVLLAQKAYSLYKTYPLISQYLSGTTASGLY 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E  L  E+F GE H +  A+K+ +++ +L   D I FN+  QL K+  + ++    +GLR
Sbjct: 66  EAKLAREEFPGEVHVFAPAFKESDMEELLQISDHIDFNSERQLRKYGQRCREAGISVGLR 125

Query: 122 INPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           INP  S      L DP  P SR G          ++ V+GL FH  CE  +       LK
Sbjct: 126 INPQCSTQGDHALYDPCAPGSRFGVTSDKIPSDLLELVDGLHFHTLCEQGADD-LQTTLK 184

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +E +FG ++ Q++W+++GGG H T  DY V      +K   E Y++ +Y+EPGEAI  N
Sbjct: 185 AVEDQFGAYLHQVKWLNMGGGHHITRDDYDVDLLISEIKRIRETYNLDVYVEPGEAIALN 244

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRS 296
              L T VLDI EN    +++D+S   H+PD L       +         PYT  +   +
Sbjct: 245 AGYLATEVLDIVENGIETLVLDASASCHMPDVLEMPYRPPLRDGFEAQEKPYTYRLSSNT 304

Query: 297 CLAGDIFGEFHFEKPVK 313
           CL GD+ G    +  +K
Sbjct: 305 CLTGDVIGIIALKNRLK 321


>gi|260577571|ref|ZP_05845510.1| diaminopimelate decarboxylase [Corynebacterium jeikeium ATCC 43734]
 gi|258604295|gb|EEW17533.1| diaminopimelate decarboxylase [Corynebacterium jeikeium ATCC 43734]
          Length = 470

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 51/408 (12%), Positives = 114/408 (27%), Gaps = 47/408 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +++D++                G  +  A K F +  +   + +       +SL E
Sbjct: 61  GTPAFVMDEEDFRARCRRLAKAFGG-GHYVHYASKAFLSKTVARWVMEEGLSLDVASLGE 119

Query: 63  VMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F  E    +      +    AV    + I+ +++ ++      A +L   + 
Sbjct: 120 LQVALAAGFPAERITVHGNNKSPEFLRLAVSEGAELIVVDSLQEIEALSTVAGELGKSQD 179

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK-----DKIESEIK----NVNGLMFHNNCE 168
           + +R+ P V          +    + G             +        + GL  H   +
Sbjct: 180 VLVRVTPGVHVDTHEFIATSHEDQKFGFSLASGAAHRAAMACHTADGVRLRGLHCHVGSQ 239

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQ----------IEWISLGGGIHFTDKDYPVKDFCQRL 218
                 F+   + +   +   +            ++ + LGGG              + +
Sbjct: 240 VFEASGFALAAERLLGLWKQLLDSTAALSDAPTSLDTLDLGGGYGIAYMPDQEALDVEEV 299

Query: 219 KEFSEKYSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--- 264
               +    +             +EPG AI   +      V  + +      +       
Sbjct: 300 ASDLKSKVRKAAEAAGVPVPKLNVEPGRAIAGPSMITLYRVGTVKDVEVADGMTRRYISV 359

Query: 265 ---VEAHVPDYLLYQESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKP-VKIGD 316
              +  ++   L   E      N           + G  C +GD+          V+ GD
Sbjct: 360 DGGMSDNIRPALYQAEYDCRVANREVAGELLPTRIVGSHCESGDVLVNDALVPDDVRPGD 419

Query: 317 RISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            +       Y     + +N +  P +           IR  + +D   
Sbjct: 420 LLMIGATGAYCYAMASRYNMMTRPPVVRVADGEARLMIRRETIDDVLA 467


>gi|68536438|ref|YP_251143.1| hypothetical protein jk1353 [Corynebacterium jeikeium K411]
 gi|68264037|emb|CAI37525.1| lysA [Corynebacterium jeikeium K411]
          Length = 470

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 51/408 (12%), Positives = 114/408 (27%), Gaps = 47/408 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +++D++                G  +  A K F +  +   + +       +SL E
Sbjct: 61  GTPAFVMDEEDFRARCRRLAKAFGG-GHYVHYASKAFLSKTVARWVMEEGLSLDVASLGE 119

Query: 63  VMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F  E    +      +    AV    + I+ +++ ++      A +L   + 
Sbjct: 120 LQVALAAGFPAERITVHGNNKSPEFLRLAVSEGAELIVVDSLQEIEALSTVAGELGKSQD 179

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK-----DKIESEIK----NVNGLMFHNNCE 168
           + +R+ P V          +    + G             +        + GL  H   +
Sbjct: 180 VLVRVTPGVHVDTHEFIATSHEDQKFGFSLASGAAHRAAMACHTADGVRLRGLHCHVGSQ 239

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQ----------IEWISLGGGIHFTDKDYPVKDFCQRL 218
                 F+   + +   +   +            ++ + LGGG              + +
Sbjct: 240 VFEASGFALAAERLLGLWKQLLDSTAALSDAPTSLDTLDLGGGYGIAYMPDQEALDVEEV 299

Query: 219 KEFSEKYSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--- 264
               +    +             +EPG AI   +      V  + +      +       
Sbjct: 300 ASDLKSKVRKAAEAAGVPVPKLNVEPGRAIAGPSMITLYRVGTVKDVEVADGMTRRYISV 359

Query: 265 ---VEAHVPDYLLYQESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKP-VKIGD 316
              +  ++   L   E      N           + G  C +GD+          V+ GD
Sbjct: 360 DGGMSDNIRPALYQAEYDCRVANREVAGELLPTRIVGSHCESGDVLVNDALVPDDVRPGD 419

Query: 317 RISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            +       Y     + +N +  P +           IR  + +D   
Sbjct: 420 LLMIGATGAYCYAMASRYNMMTRPPVVRVADGEARLMIRRETIDDVLA 467


>gi|322373867|ref|ZP_08048402.1| protein TabA [Streptococcus sp. C150]
 gi|321277239|gb|EFX54309.1| protein TabA [Streptococcus sp. C150]
          Length = 421

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 67/392 (17%), Positives = 123/392 (31%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   ++  
Sbjct: 24  PTPFHLYDEKGIRETARAVNAAFSWNPGFKEFFAVKATPNPAILRILKEEGCGVDCATDT 83

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++  +  F   T ++       E      N D TI  +    +   ++ A      + 
Sbjct: 84  ELVMSKKIGFDNTTISFTSNDTRSEEFVYARNIDATINLDAYEDIFFLEEVAGLPET-LS 142

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKI----ESEIKNVNGLMFH------NNCEN 169
           LR NP   +S       +   S+ G   +         + K V     H           
Sbjct: 143 LRFNPGGVFSLGTDIMDHPEESKFGMTKEQLFKGYAYLQEKGVKSFGLHAFLASNTVTNE 202

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY---- 225
                 + + +   +        +++I+L GG+         ++    + E         
Sbjct: 203 YYPTLAAQLFELAVEIKNELGVSLDFINLSGGVGVDYTPANKQNDIVAIGEGVHAKFDEI 262

Query: 226 -------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                   + IY E G  +      + T VL I +  +  V VD+S    +   +     
Sbjct: 263 LVPNGLGHISIYTELGRYMTAPHGLVVTKVLHIKDTYRRYVGVDASAVNLLRPAMYDAYH 322

Query: 279 ATIYPNTGPYTAMVC---GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                        V    G  C   D F +       +IGD +   D   +  +    +N
Sbjct: 323 HITNMTNPNGEIQVVDVTGSLCENNDKFAKNRELPEARIGDTLVIHDTGAHGFSMGYNYN 382

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           G       +   DGT + IR   + NDY+  L
Sbjct: 383 GRLRSAEILYQEDGTARMIRRTETMNDYFATL 414


>gi|260173808|ref|ZP_05760220.1| diaminopimelate decarboxylase [Bacteroides sp. D2]
 gi|315922071|ref|ZP_07918311.1| diaminopimelate decarboxylase [Bacteroides sp. D2]
 gi|313695946|gb|EFS32781.1| diaminopimelate decarboxylase [Bacteroides sp. D2]
          Length = 386

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 63/366 (17%), Positives = 118/366 (32%), Gaps = 26/366 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           ++TP+Y  D + L + L      + K     +  A+K  A   +   + +   G    S 
Sbjct: 13  LQTPFYYYDTKVLRDTLSAINHEVAKYPNYSVHYAVKANANPKVLTIIRESGMGADCVSG 72

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115
            E+       F      +    K      +        FN  ++ +L    + A  Q   
Sbjct: 73  GEIRAAIRAGFPANKVVFAGVGKADWEINLGLEYGIFCFNVESIPELEVINELAAAQNKV 132

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168
             +  RINP V              ++ G   +D         E +     GL FH   +
Sbjct: 133 ANVAFRINPDVGAHTHANITTGLAENKFGISMQDMDKVIDVAQEMKNVKFIGLHFHIGSQ 192

Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-------DFCQRL 218
                 F+     +  ++ +       +E I++GGG+         +        F    
Sbjct: 193 ILDMGDFVALCNRVNELQDKLEARRILVEHINVGGGLGIDYGHPNRQAIPNFKDYFATYA 252

Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQE 277
            +   +    ++ E G A+V    +L + VL + +  +    + D+ +   +   L    
Sbjct: 253 GQLKLRPYQTLHFELGRAVVGQCGSLISKVLYVKQGTRKKFAILDAGMTDLIRPALYQAF 312

Query: 278 S--ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                I          V G  C + D+FG+      VK GD I+      Y     + +N
Sbjct: 313 HKMENITSEEPLEAYDVVGPICESSDVFGKAIDLNKVKRGDLIALRSAGAYGEIMASRYN 372

Query: 336 GINMPT 341
              +P 
Sbjct: 373 CRELPK 378


>gi|313499803|gb|ADR61169.1| LysA [Pseudomonas putida BIRD-1]
          Length = 410

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 50/398 (12%), Positives = 129/398 (32%), Gaps = 44/398 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P +  D + + + +     +       +  A K      +   +  +     + SL E
Sbjct: 16  GSPLWAYDTRTIADRVKQL-NVFD----TVRFAQKANPNLHVLRLMRAHGLVLDAVSLGE 70

Query: 63  VMLGHE------KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
           +                      A     ++ V+++   +   ++  L +  +++     
Sbjct: 71  MERAFAAGASVDGDPAGVVLTCDALDRPTLERVVASKIEVNAGSIDMLRQLGERS--PGH 128

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170
           ++ +RINP   +      +     S+ G   ++       I++   ++ G+  H      
Sbjct: 129 RVWIRINPGFGHGHSRKTNTGGENSKHGIWHEELDEALACIKAHGLHLVGVHMHIGSGVD 188

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK-- 224
            +     + +++ +  G     IE  S+GGG+        K   ++ + Q      ++  
Sbjct: 189 -YQHLEQVARSMIELIGRLGVDIEAFSIGGGLSTPYRSTDKPVDLQRYAQTWAVARKEIE 247

Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESA 279
               + V++ +EPG  +V  +  L   V  + +      V++D+     +   +      
Sbjct: 248 AMLGHPVRMEIEPGRFLVAESGYLVAEVRAVKQVGRNTFVMIDAGFNDLMRPAMYGAYHG 307

Query: 280 TIY-------PNTGPYTAMVCGRSCLAGDIFGEF------HFEKPVKIGDRISFEDVAGY 326
                      +      +V G  C +GD+F +             ++GD +   D   Y
Sbjct: 308 MTLLDADGQAVDRPRQPTVVAGPLCESGDVFTQDDQALTPQDLPQAQVGDLLVIHDAGAY 367

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    +          R  +  D  +
Sbjct: 368 GASMSSNYNSRPLLPEFLIENGALRMIRRRQTVQDLLS 405


>gi|317493899|ref|ZP_07952316.1| diaminopimelate decarboxylase [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316918226|gb|EFV39568.1| diaminopimelate decarboxylase [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 420

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 51/398 (12%), Positives = 119/398 (29%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D + +   ++            +  A K  +   +   ++Q      S SL E+ 
Sbjct: 27  PVWVYDGEIIKQQIEKLREFDV-----IRFAQKACSNIHILRLMHQQGVKVDSVSLGEIE 81

Query: 65  LGH-----EKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                            +     D    A +   +  +   +   L +  +++      +
Sbjct: 82  RALLAGFQPGGSPSQIVFTADVLDEATIARVVELNIPVNAGSADMLKQLGERS--AGHPV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G   ++       I+     + GL  H       +
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWFEELPQALALIKQYDLELIGLHMHIGSGVD-Y 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-------- 224
              + +   + ++       I+ IS GGG+    +                         
Sbjct: 199 QHLAQVCDTMVRQVIELGHDIQAISAGGGLSIPYQKGDESINVSHYYGLWNDARERIARH 258

Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V + +EPG  +V  +  L   V  + +   ++ V+VD+     +   +        
Sbjct: 259 LGHPVHLEIEPGRYLVAESGVLVAQVRAVKNMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                           +++ G  C +GD+F        E       ++GD + F D   Y
Sbjct: 319 LLPADGRDVTAQPRVESVIGGPLCESGDVFTQKAGGEVETRSIPAAQVGDYLVFHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    +     +    R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFENGESRLIRRRQTIEELLA 416


>gi|87200688|ref|YP_497945.1| diaminopimelate decarboxylase [Novosphingobium aromaticivorans DSM
           12444]
 gi|87136369|gb|ABD27111.1| diaminopimelate decarboxylase [Novosphingobium aromaticivorans DSM
           12444]
          Length = 419

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 60/375 (16%), Positives = 109/375 (29%), Gaps = 23/375 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           + TP Y+  +  L  +             VK+  A+K      +   L     G    S 
Sbjct: 25  VGTPVYVYSRATLTRHARVFRDALSILPAVKIAFAVKSNPNLAVLKVLAAEGYGADVVSG 84

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK----AQKLH 115
            E+          +   ++   K               FN  S+    +      +    
Sbjct: 85  GEMERALAAGMKPDGIVFSGVGKTEAEMRRGIEAGIGQFNLESEEEGLELAEIAASMGKV 144

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCE 168
               LR+NP V           +  ++ G           +       N+ GL  H   +
Sbjct: 145 ASAALRVNPDVDAGTHGKISTGKAENKFGVPFDRAAAIYARLADTPGLNMRGLALHIGSQ 204

Query: 169 NKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEF 221
                   A    +    +        +  + LGGG+    K         ++   + + 
Sbjct: 205 LSKLDPLEAAFTKVGGLMRAIREGGHAVTHMDLGGGVGVPYKAGEVFPQPAEYAAMVAKV 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES-- 278
           +  + V +  EPG  I  NT  L T V+ + E   +  +V D+++       L       
Sbjct: 265 TADWGVTLMFEPGRVITGNTGVLMTQVVRVKEGAGHPWVVVDAAMNDLARPALYDAWHDF 324

Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
           A + P    + A + G  C + D F        V  GD   F     Y     N +N   
Sbjct: 325 AAVEPTGETFVANIVGPICESSDTFAMARTIDKVGRGDLAVFRTAGAYGATMANTYNSRP 384

Query: 339 MPTIAVKNVDGTIKA 353
           +    + + +     
Sbjct: 385 LVPEVMVDGEKWAVV 399


>gi|42523266|ref|NP_968646.1| hypothetical protein Bd1777 [Bdellovibrio bacteriovorus HD100]
 gi|39575471|emb|CAE79639.1| lysA [Bdellovibrio bacteriovorus HD100]
          Length = 391

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 68/367 (18%), Positives = 125/367 (34%), Gaps = 28/367 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y+ D   +           K  G +L  A+K     G+   L     G    SL E+ 
Sbjct: 27  PIYVYDLDSVAQRYQAMSQALK--GTRLFFAVKSNPNPGVLQKLKSLGAGADVVSLGEIK 84

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--KIG 119
              E  F  +   Y+   K     A         I   ++ +L +    A++L+K  ++ 
Sbjct: 85  RALECGFSPQDIVYSGVGKTKFELAEALKLGIYQINVESLPELERIGVLARELNKKAQVA 144

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKI--------ESEIKNVNGLMFHNNCENKS 171
           LR+NP V  +           ++ G +              S+  ++ G+  H   +   
Sbjct: 145 LRLNPDVDINTHPYIATGLKDNKFGMERSMVPALVKCLKSYSDSIDLVGVSLHLGSQMLE 204

Query: 172 FLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEF------- 221
           F  +   LK ++    E       ++    GGG+        ++     L+++       
Sbjct: 205 FSGYDEALKRLKTVYLELQAQFPTLKKFDFGGGLGIFYDRVDLQLEESLLQKYAQITLEN 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQES-- 278
               + ++  EPG  +V +   L T V  I E   K  VIVD+ +   +   L       
Sbjct: 265 LSDLNCELQAEPGRWLVAHCGALITQVQYIKETSAKTFVIVDAGMNHLIRPSLYEATHRI 324

Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
             +      +   V G  C + D F +      V+ GD ++  D   Y  +  + +N   
Sbjct: 325 EPLKRKDAAFVVDVVGPICESSDFFAKEISLTKVQEGDFVAIMDSGAYGYSMASVYNLQE 384

Query: 339 MPTIAVK 345
           +P     
Sbjct: 385 LPLEICI 391


>gi|296128907|ref|YP_003636157.1| diaminopimelate decarboxylase [Cellulomonas flavigena DSM 20109]
 gi|296020722|gb|ADG73958.1| diaminopimelate decarboxylase [Cellulomonas flavigena DSM 20109]
          Length = 458

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 57/416 (13%), Positives = 123/416 (29%), Gaps = 54/416 (12%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK------NAGVKLLLALKCFAAWGMFDTLNQYMDGTT 56
            TP Y++D+  L +         +        GV +  A K      +   ++       
Sbjct: 37  GTPAYVVDEADLRSRARAYRTAFETACAQVGTGVDVYYAGKALLTRAVARWVHDEGLRVD 96

Query: 57  SSSLYEVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
           ++S  E+ +       G     +      D    A+ +    II +++ ++++     + 
Sbjct: 97  TASGGELAVALAAGVPGADIGLHGNNKSDDELRAALDAGVGRIIVDSLVEVDRLAALVRA 156

Query: 114 LHKKIG------LRINPSVSYSKFILADPNRPFSRLGEKCK-------------DKIESE 154
                G      +R+   V               + G                   +E  
Sbjct: 157 HRGPDGAPAPVMVRVTTGVHAGGHEFISTAHEDQKFGLSLASDGGDSPALTALLRVVERP 216

Query: 155 IKNVNGLMFHNNCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
             ++ G+  H   +      F      +L             ++ + LGGG         
Sbjct: 217 ELHLLGIHSHIGSQILDPSGFAVAAQRVLALRATLHARTGVLVDEVDLGGGYGIAYLPGD 276

Query: 211 VK--------DFCQRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV 259
           V         +  Q + + + +      ++ +EPG AIV        TV  +     +  
Sbjct: 277 VPLDPGRIAKEVAQAVADAARELGTPLPRLSIEPGRAIVGPAGLTLYTVGTVKPVRLDDG 336

Query: 260 IVDSS------VEAHVPDYLLYQESA----TIYPNTGPYTAMVCGRSCLAGDIFGEFHFE 309
            V +       +  ++   L          +   +  P  A V G+ C +GDI       
Sbjct: 337 RVRTYVSVDGGMSDNIRPALYGAHYHAEVVSRVSDAEPVLARVVGKHCESGDIVVHEVRL 396

Query: 310 K-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              V+ GD ++      Y  +  + +N +  P +       +   +R  + +D   
Sbjct: 397 PGDVRAGDLLAVAATGAYGRSMASNYNLLTRPPVVAVTAGESRVLVRRETVDDLLA 452


>gi|293372875|ref|ZP_06619249.1| diaminopimelate decarboxylase [Bacteroides ovatus SD CMC 3f]
 gi|299146584|ref|ZP_07039652.1| diaminopimelate decarboxylase [Bacteroides sp. 3_1_23]
 gi|292632164|gb|EFF50768.1| diaminopimelate decarboxylase [Bacteroides ovatus SD CMC 3f]
 gi|298517075|gb|EFI40956.1| diaminopimelate decarboxylase [Bacteroides sp. 3_1_23]
          Length = 386

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 63/366 (17%), Positives = 118/366 (32%), Gaps = 26/366 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           ++TP+Y  D + L + L      + K     +  A+K  A   +   + +   G    S 
Sbjct: 13  LQTPFYYYDTKVLRDTLSAINHEVAKYPNYSVHYAVKANANPKVLTIIRESGMGADCVSG 72

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115
            E+       F      +    K      +        FN  ++ +L    + A  Q   
Sbjct: 73  GEIRAAIRAGFPANKVVFAGVGKADWEINLGLEYGIFCFNVESIPELEVINELAAAQNKV 132

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168
             +  RINP V              ++ G   +D         E +     GL FH   +
Sbjct: 133 ANVAFRINPDVGAHTHANITTGLAENKFGISMQDMDKVIDVAQEMKNVKFIGLHFHIGSQ 192

Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-------DFCQRL 218
                 F+     +  ++ +       +E I++GGG+         +        F    
Sbjct: 193 ILDMGDFVALCNRVNELQDKLEARRILVEHINVGGGLGIDYGHPNRQAIPNFKDYFATYA 252

Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQE 277
            +   +    ++ E G A+V    +L + VL + +  +    + D+ +   +   L    
Sbjct: 253 GQLKLRPYQTLHFELGRAVVGQCGSLISKVLYVKQGTRKKFAILDAGMTDLIRPALYQAF 312

Query: 278 S--ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                I          V G  C + D+FG+      VK GD I+      Y     + +N
Sbjct: 313 HKMENITSEEPLEAYDVVGPICESSDVFGKAIDLNKVKRGDLIALRSAGAYGEIMASGYN 372

Query: 336 GINMPT 341
              +P 
Sbjct: 373 CRELPK 378


>gi|315084726|gb|EFT56702.1| diaminopimelate decarboxylase [Propionibacterium acnes HL027PA2]
          Length = 476

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 65/403 (16%), Positives = 128/403 (31%), Gaps = 43/403 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y++D+  L                 +  A K F    +   ++Q      + +  E
Sbjct: 63  GSPLYVLDESDLRQRARAFRDAFSEWD--VYYAGKAFLTRTIASWIDQEGLFLDTCTGGE 120

Query: 63  VMLGHEK-FGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117
           ++   +          +   K  D    A+      II +++ ++ + +   ++   H +
Sbjct: 121 LITALQGGMDPARIGLHGNNKSIDELKLALSVGVGRIIVDSLDEIMRIEQLCRENGWHAR 180

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G                 S+  ++ G+  H   +
Sbjct: 181 VMVRVTAGVEAHTHEYIATAHEDQKFGFSITNGAAMVAMVRCHTSDAIDLLGVHSHIGSQ 240

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F       +K +E+      + +  + LGGG              + L     +
Sbjct: 241 IFDTAGFEVAARRTMKLLEQFHQATGSALPELDLGGGFGIAYTSQDSPATVESLAGALRE 300

Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDSSVEA 267
                          I LEPG  IV  TT    TV  +          +  V VD  +  
Sbjct: 301 IVTLEARGRGMEVPHISLEPGRVIVGPTTMALYTVGTVKPVDLDTGAQRMYVSVDGGMSD 360

Query: 268 HVPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFED 322
           ++   L   E + +  N      P    + G+ C AGDI     +    V  GD I+   
Sbjct: 361 NIRPALYAAEYSAVIANRTSEVAPVLCRIVGKHCEAGDILVRDVYLPGDVSPGDVIAVPG 420

Query: 323 VAGYNINRKNWFNGINMPTIAVKNVD-GTIKAIREFSYNDYYN 364
              Y+ +  + +N +  P +   N D G +  +R  + +D   
Sbjct: 421 AGAYSRSMASNYNHVPRPAVVSVNEDRGVLVLLRRENIDDLLA 463


>gi|123966414|ref|YP_001011495.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT
           9515]
 gi|123200780|gb|ABM72388.1| Diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT
           9515]
          Length = 457

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 58/398 (14%), Positives = 124/398 (31%), Gaps = 35/398 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG---VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           ++P Y++D+  L N+        +         + A K  ++  M + +     G  + S
Sbjct: 49  ESPLYILDEITLRNSCRAYKKALEKYYRGVSLPIYASKANSSLFMSNLVASEGFGLDAVS 108

Query: 60  LYEVMLGHEK-FGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             E++   +     E   ++     D EI   + N   +I +    L + ++ +  L+  
Sbjct: 109 EGELLTALKGGVPNEKIVFHGNNKSDKEIAFAIKNKIKVIVDNEHDLKRLEEISNSLNFD 168

Query: 118 IGLRIN--PSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCE 168
           + + I   P +              S+ G   +         I+++   + GL  H   +
Sbjct: 169 LEIMIRFTPGIECHTHEYIRTGSFDSKFGFGIESLTKLFGVIIKTKHLKLIGLHAHIGSQ 228

Query: 169 NKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR-------- 217
                    + + +     +   F   I+ +++GGG+                       
Sbjct: 229 IFELEPHKDLGEIMVNVMLQAKKFGHNIKELNVGGGLGIKYTQEDDPPSIDEWIKTVSSS 288

Query: 218 LKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDY 272
           +++  +K       +  EPG +IV+        +    E         VD  +  +    
Sbjct: 289 IEQACKKNKLDLPLLMCEPGRSIVSTAGVTIYKIGSFKEIPGIRTYLSVDGGMSDNPRPI 348

Query: 273 LLYQESATIY-----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
                 +                 V G+ C +GD+  +       K GD I       YN
Sbjct: 349 TYQSNYSACLVNDPLNINSKNKYTVAGKHCESGDVLFKEIELGKCKTGDLICVFGTGAYN 408

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            +  + +N I  P   +          +  S +D   N
Sbjct: 409 NSMSSNYNRIPKPAAVLVCNGEAEIIQKRESPHDLLKN 446


>gi|118385090|ref|XP_001025683.1| diaminopimelate decarboxylase family protein [Tetrahymena
           thermophila]
 gi|89307450|gb|EAS05438.1| diaminopimelate decarboxylase family protein [Tetrahymena
           thermophila SB210]
          Length = 436

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 74/403 (18%), Positives = 127/403 (31%), Gaps = 45/403 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSS 59
            TP Y+ + Q +       L   K      K L A K      +   + +    G  + S
Sbjct: 27  DTPLYVYNSQVIKERCQQLLNALKLLPTQTKALYACKANTNIAIIKLMKEQGIQGIDAVS 86

Query: 60  LYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------------ 106
           + EV+L     F G    +   +   +          ++        +            
Sbjct: 87  IQEVLLAKKAGFEGRDIQFTENFIGQKEVEDSLKEGILLCIGELDTLETLGQRLQSKKLV 146

Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE------SEIKNVNG 160
            K+       K+ +RINP V   +        P S+ G  C    E           + G
Sbjct: 147 LKETENGQKLKVAVRINPDVGVGECEHTITGGPKSKFGIYCNQIEEIIKISEKYPIEIEG 206

Query: 161 LMFHNNCE--NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD--------YP 210
           +  H            +   +K I  +    I  +++I++GGGI    +D          
Sbjct: 207 IHQHIGSNMVQNHLDKYVQSIKKI-FDVALQIKGLKFINVGGGIGVPYEDGVKPLDLIEA 265

Query: 211 VKDFCQRLKEFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEA 267
                +  K F EKY   + +  EPG  +V  +  L TTV  I        +  D+ +  
Sbjct: 266 YSKIAEEYKIFKEKYGHDVEIRVEPGRFLVAESGHLLTTVTAIKKNQYSTWIGTDTGMNH 325

Query: 268 HVPDYLL--YQESATIYPNT-------GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRI 318
            +   L   Y +                     VCG  C +GD+FG+    + VK  D +
Sbjct: 326 LIRPALYESYHKIENASNFESTNNEDSQRQKVNVCGNICESGDVFGQNRLIRTVKDDDIL 385

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361
           +  +   Y     + +N  N P   + +        R  +  D
Sbjct: 386 AIYNGGAYGYCMASNYNSRNRPAEILVDGSVDKLIRRRETLED 428


>gi|322420222|ref|YP_004199445.1| Orn/DAP/Arg decarboxylase 2 [Geobacter sp. M18]
 gi|320126609|gb|ADW14169.1| Orn/DAP/Arg decarboxylase 2 [Geobacter sp. M18]
          Length = 422

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 50/391 (12%), Positives = 124/391 (31%), Gaps = 34/391 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +TP+++ D+  +     + +       G +   A+K      +   + +   G   SS+ 
Sbjct: 23  QTPFHIYDEAGIRETGASLVKAFSGIPGFREFFAVKALPNREILKLMKEMGFGFDCSSIP 82

Query: 62  EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E++   +     E   +      ++    A       +  + +S ++K       +  ++
Sbjct: 83  ELIQARQLGAKPEDIMFTSNNTSEEEFEFAARDGGCILNLDDISLIDKV-----PVFPEM 137

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCE---- 168
                         +   N   ++ G   +  +E+  +         GL           
Sbjct: 138 ICFRYNPGPRRTGNVIIGNPEEAKYGVSHEQVVEAYRQAQARGARRFGLHTMVASNELDY 197

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK 224
                    +L+  E+       + +++++GGG     +       +      + E  + 
Sbjct: 198 TYIVETARMVLEVAEEVEAALAIKFDFVNIGGGFGIPYRPDQKPLDLPTMSAEITELFDG 257

Query: 225 ------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                 ++  +++E G  +      L  T ++  +  +  V +D+ + + +   L     
Sbjct: 258 FRKRHGHAPAMFMESGRFMTGPHGALVATAINSKDTYRKYVGLDACMSSLMRPALYGSYH 317

Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                    +       V G  C   D F       P++ GD +   D   +       +
Sbjct: 318 HIDVLGKDGHERSEVYDVVGSLCENNDKFAIQRELPPIEDGDLVVIHDSGAHGHAMGFQY 377

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG   P   +   DG ++ IR   +  DY+ 
Sbjct: 378 NGRLRPKELMLRADGRVELIRRAETVEDYFA 408


>gi|157372071|ref|YP_001480060.1| diaminopimelate decarboxylase [Serratia proteamaculans 568]
 gi|157323835|gb|ABV42932.1| diaminopimelate decarboxylase [Serratia proteamaculans 568]
          Length = 420

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 54/398 (13%), Positives = 115/398 (28%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +  D   +   +    +        +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWAYDAAIISERISQLRHFDV-----IRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
              +             +     D    A +S     +   ++  L +    +      +
Sbjct: 82  RALQAGFQPGGEPSEIVFTADVLDHATLARVSELKIPVNVGSIDMLEQLGQVSTGHP--V 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172
            LRINP   +      +     S+ G    D       I+     + G+  H       +
Sbjct: 140 WLRINPGFGHGHSQKTNTGGENSKHGIWYADLPQAVEKIQQYGLKLIGVHMHIGSGVD-Y 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK---- 224
                +   + ++       I  IS GGG+        +    + +        E+    
Sbjct: 199 QHLERVCDAMVQQVIDLGQDISAISAGGGLSIPYQYGEEAIDTEHYFGLWNSARERIAAH 258

Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATI 281
             + V + +EPG  ++     L   V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVSLEIEPGRFLMAEAGVLVAEVRAVKDMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 282 YPNTGPYTA--------MVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                            ++ G  C +GD+F        E     PV++GD + F D   Y
Sbjct: 319 LLPADGRDTANQPLRDTVIAGPLCESGDVFTQQAGGGIETRELPPVQVGDYLVFHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    +          R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFENGEARLIRRRQTIEELIA 416


>gi|325978967|ref|YP_004288683.1| diaminopimelate decarboxylase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|325178895|emb|CBZ48939.1| Diaminopimelate decarboxylase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 414

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 59/388 (15%), Positives = 120/388 (30%), Gaps = 27/388 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   ++  
Sbjct: 19  PTPFHLYDEKGIREKARALNKAFAWNKGFKEYFAVKATPTPAILKILQEENCGVDCATEV 78

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E+++ H+    +    +      E         TI  +    +   K+ A      + LR
Sbjct: 79  ELLMSHKLGFTDIMFSSNDTPAREFRYAKEIGATINLDAYEHIAFLKEVAGLPET-VSLR 137

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVN--GLMFHNNCEN----KS 171
            NP   ++       N   S+ G      I+     + + V   G+              
Sbjct: 138 YNPGGVFALGTDIMDNPEESKFGMTKAQLIQGFKDLKAEGVKNFGIHSFLASNTVTNDYY 197

Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ--- 228
                 + +   +        + +I+L GG+    +     +    + +   +   +   
Sbjct: 198 PELARQLFELAVEVKEKTGVAVSFINLSGGVGVNYRPEQEPNDIAVIGKGVHRVFDEVLI 257

Query: 229 --------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280
                   I+ E G  ++     L T V    +  +  + VD+S    +   +       
Sbjct: 258 PAGLGDVKIFTELGRFMLAPHGLLVTKVRHRKQTYRTYIGVDASAVNLMRPAMYDAYHHI 317

Query: 281 IY---PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                PN       V G  C   D F +       ++GD +   D   +  +    +NG 
Sbjct: 318 TNVSNPNGKLEVVDVVGSLCENNDKFAKQRELPEARVGDTLVIHDTGAHGFSMGYQYNGR 377

Query: 338 NMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
                 +   DG+ + IR   +  DY+ 
Sbjct: 378 LRSAEILYEEDGSARLIRRAETPEDYFA 405


>gi|160882269|ref|ZP_02063272.1| hypothetical protein BACOVA_00215 [Bacteroides ovatus ATCC 8483]
 gi|156112358|gb|EDO14103.1| hypothetical protein BACOVA_00215 [Bacteroides ovatus ATCC 8483]
          Length = 386

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 63/366 (17%), Positives = 118/366 (32%), Gaps = 26/366 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           ++TP+Y  D + L + L      + K     +  A+K  A   +   + +   G    S 
Sbjct: 13  LQTPFYYYDTKVLRDTLSAINHEVAKYPNYSVHYAVKANANPKVLTIIRESGMGADCVSG 72

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115
            E+       F      +    K      +        FN  ++ +L    + A  Q   
Sbjct: 73  GEIRAAIRAGFPANKVVFAGVGKADWEINLGLEYGIFCFNVESIPELEVINELAAAQNKV 132

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168
             +  RINP V              ++ G   +D         E +     GL FH   +
Sbjct: 133 ANVAFRINPDVGAHTHANITTGLAENKFGISMQDMDKVIDVAQEMKNVKFIGLHFHIGSQ 192

Query: 169 NKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-------DFCQRL 218
                 F+     +  ++ +       +E I++GGG+         +        F    
Sbjct: 193 ILDMSDFVALCNRVNELQDKLEARRILVEHINVGGGLGIDYGHPNRQAIPNFKDYFATYA 252

Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQE 277
            +   +    ++ E G A+V    +L + VL + +  +    + D+ +   +   L    
Sbjct: 253 GQLKLRPYQTLHFELGRAVVGQCGSLISKVLYVKQGTRKKFAILDAGMTDLIRPALYQAF 312

Query: 278 S--ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                I          V G  C + D+FG+      VK GD I+      Y     + +N
Sbjct: 313 HKMENITSEEPLEAYDVVGPICESSDVFGKAIDLNKVKRGDLIALRSAGAYGEIMASGYN 372

Query: 336 GINMPT 341
              +P 
Sbjct: 373 CRELPK 378


>gi|189462467|ref|ZP_03011252.1| hypothetical protein BACCOP_03156 [Bacteroides coprocola DSM 17136]
 gi|189430628|gb|EDU99612.1| hypothetical protein BACCOP_03156 [Bacteroides coprocola DSM 17136]
          Length = 386

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 70/365 (19%), Positives = 126/365 (34%), Gaps = 26/365 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTAL-YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           ++TP+Y  D   L + L+       K     +  A+K  A   +   + ++  G    S 
Sbjct: 13  LETPFYYYDANLLRDTLNVIRTEAAKYNKFCVHYAIKANANPKVLSIIREHGLGADCVSG 72

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115
            E+       F      Y    K      +  + D   FN  +V +L    + A  +   
Sbjct: 73  GEIAAAIKAGFPASKIVYAGVGKTDREINLGLDHDIFCFNVESVPELEVINELAAAKGKI 132

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE 168
            ++  RINP V              ++ G             +E       GL FH   +
Sbjct: 133 ARVAFRINPDVGAHTHANITTGLAENKFGISMQDMDKVIDRALEMNNVKFVGLHFHIGSQ 192

Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD---YPVKDFCQRLKEFS 222
                 F+     + +++++       +E I++GGG+          P+ DF      + 
Sbjct: 193 ILDMGDFVALCNRINDLQEKLYARQIIVEHINVGGGLGIDYAHPNRQPIPDFADYFATYH 252

Query: 223 EKY----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL--Y 275
           +         ++ E G ++V    +L T V+ + +   K   IVD  +   +   L   Y
Sbjct: 253 KHLKLRPQQTLHFELGRSVVGQCGSLITKVIYVKQGTNKQFAIVDGGMTDLIRPALYQAY 312

Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
            +   I       T  V G  C + D+FG+      VK GD I+      Y     + +N
Sbjct: 313 HKIENITSEEPNETYDVVGPICESSDVFGKAIDLNRVKRGDLIALRSAGAYGEIMASGYN 372

Query: 336 GINMP 340
              +P
Sbjct: 373 CRTLP 377


>gi|238916881|ref|YP_002930398.1| diaminopimelate decarboxylase [Eubacterium eligens ATCC 27750]
 gi|238872241|gb|ACR71951.1| diaminopimelate decarboxylase [Eubacterium eligens ATCC 27750]
          Length = 426

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 65/392 (16%), Positives = 121/392 (30%), Gaps = 30/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TPY+L D++ +  N          N G +   A+K      +   L  Y  G   +S+ 
Sbjct: 21  PTPYHLYDEKGIRENAKRLKEAFSWNKGYREYFAVKATPNPYILKILKDYGCGVDCASMA 80

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQ-KLHKKI 118
           E+M+G+   +  E   ++       E         TI  + ++ +         K  + +
Sbjct: 81  ELMMGYALDYKPEEIMFSSNDTPAEEYAYANEIGATINLDDITHIEFLDKILDGKFPETM 140

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES----EIKNVNGLMFH------NNCE 168
             R NP   +        N   ++ G      IE+    + K V     H          
Sbjct: 141 SCRYNPGGYFQLGTSIMDNPGDAKYGMTHDQIIEAFKILKSKGVKHFGIHSFLASNTVSN 200

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
                    + +   +        I++++L GG+    K     +    + E   K   +
Sbjct: 201 EYYPTLAKILFELAVELRDKTGADIKFVNLSGGVGVAYKPEQEPNDIAVIGEGVHKVYDE 260

Query: 229 -----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
                      IY E G  ++     L T  +      K  + VD+     +   +    
Sbjct: 261 VLGAAGMGDVAIYTELGRFMLAPYGCLVTKAIHEKHIYKEYIGVDACASNLMRPAIYGAY 320

Query: 278 SATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                         +   V G  C   D F        + +GD +   D   +  +    
Sbjct: 321 HHITVAGKEDAPCDHKYDVTGSLCENSDKFAIDRMLPKIDMGDYLIIHDTGAHGFSMGYQ 380

Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           +NG       +   DG+++ IR   +  DYY 
Sbjct: 381 YNGKLRSAELLLKEDGSVQMIRRAETIKDYYA 412


>gi|323351012|ref|ZP_08086669.1| diaminopimelate decarboxylase [Streptococcus sanguinis VMC66]
 gi|322122736|gb|EFX94445.1| diaminopimelate decarboxylase [Streptococcus sanguinis VMC66]
          Length = 416

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 57/392 (14%), Positives = 119/392 (30%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   +S  
Sbjct: 19  PTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGCGVDCASYV 78

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++  +  F G+   ++       E         TI  +    +   K+ A        
Sbjct: 79  ELLMSQKLGFAGQDIMFSSNNTPAEEFQFARDLGATINLDAYEDVAFLKEAAGIPKVISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMF----HNNCEN 169
                 V      + D     ++ G      I++  +         G+      +    +
Sbjct: 139 RYNPGGVFELGTSIMDNP-EEAKFGMTKDQLIQAFKELKELGAEKFGIHALLASNTVSND 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227
                   + +   +       ++++I+L GG+    +    ++    + +   +     
Sbjct: 198 YYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPDGEENDIAVIGQGVRQAYEAI 257

Query: 228 ---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                    +IY E G  ++     L T V    +  +  + VD+S    +   +     
Sbjct: 258 LIPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKQTYRTYLGVDASAVNLLRPAMYGSYH 317

Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                +          V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HITNMDRPEGETEIVDVVGSLCENNDKFAINRPLPVSQIGDTLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                +  +   DG I+ IR      DY+  L
Sbjct: 378 AKLRSSEILLEQDGNIRMIRRAEKPEDYFATL 409


>gi|262283244|ref|ZP_06061011.1| diaminopimelate decarboxylase [Streptococcus sp. 2_1_36FAA]
 gi|262261496|gb|EEY80195.1| diaminopimelate decarboxylase [Streptococcus sp. 2_1_36FAA]
          Length = 416

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 57/392 (14%), Positives = 120/392 (30%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   +S  
Sbjct: 19  PTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGCGVDCASYV 78

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++  +  F G+   ++       E         TI  +    +   K+ A        
Sbjct: 79  ELLMSQKLGFAGQDIMFSSNNTPAEEFQFARDLGATINLDAYEDVAFLKEAAGIPKVISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMF----HNNCEN 169
                 V   +  + D     ++ G      I++  +         G+      +    +
Sbjct: 139 RYNPGGVFELETSIMDNP-EEAKFGMTKDQLIQAFKELKELGAEKFGIHALLASNTVSND 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227
                   + +   +       ++++I+L GG+    +    K+    + +   +     
Sbjct: 198 YYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPEGEKNDIAVIGQGVRQAYEAI 257

Query: 228 ---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                    +IY E G  ++     L T V    +  +  + VD+S    +   +     
Sbjct: 258 LIPAGLGKVKIYTELGRFMLAPFGLLVTKVTHKKQTYRTYLGVDASAVNLLRPAMYGSYH 317

Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                +          V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HITNMDRPEGETEIVDVVGSLCENNDKFAINRPLPISQIGDTLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                +  +   DG ++ IR      DY+  L
Sbjct: 378 AKLRSSEILLEEDGNVRMIRRAERPEDYFATL 409


>gi|283835394|ref|ZP_06355135.1| diaminopimelate decarboxylase [Citrobacter youngae ATCC 29220]
 gi|291068564|gb|EFE06673.1| diaminopimelate decarboxylase [Citrobacter youngae ATCC 29220]
          Length = 418

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 58/396 (14%), Positives = 118/396 (29%), Gaps = 44/396 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRAQIAKLSQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF---GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGL 120
                    G +   +     D    A +S     +   +V  L +    +     ++ L
Sbjct: 82  RALAAGYVPGNDEIVFTADMIDNATLARVSELQIPVNAGSVDMLEQLGQLS--PGHRVWL 139

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174
           R+NP   +      +     S+ G    D       I+     + G+  H       +  
Sbjct: 140 RVNPGFGHGHSQKTNTGGENSKHGIWYSDLPAALAVIQRYQLKLVGIHMHIGSGVD-YGH 198

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE-K 224
              +   + ++   F   +E IS GGG+               Y       R +      
Sbjct: 199 LEQVCGAMVRQVIEFGQDLEAISAGGGLSIPYREGEEAIDTDHYFGLWNAAREQIAQHLG 258

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA---- 279
           + V++ +EPG  +V     L   V  +     ++ V++D+     +   +          
Sbjct: 259 HPVKLEIEPGRFLVAEAGVLVAQVRSVKAMGSRHFVLIDAGFNDLMRPAMYGSYHHISAL 318

Query: 280 ----TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNI 328
                   N      +V G  C +GD+F        E      V  GD +   D   Y  
Sbjct: 319 AGDGRSLENAPQIETVVAGPLCESGDVFTQQEGGKVETRLLPAVAPGDYLVLHDTGAYGA 378

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +  + +N   +    + +        R  + ++   
Sbjct: 379 SMSSNYNSRPLLPEVLFDNGAARLIRRRQTIDELLA 414


>gi|256784097|ref|ZP_05522528.1| diaminopimelate decarboxylase [Streptomyces lividans TK24]
 gi|289767978|ref|ZP_06527356.1| diaminopimelate decarboxylase [Streptomyces lividans TK24]
 gi|289698177|gb|EFD65606.1| diaminopimelate decarboxylase [Streptomyces lividans TK24]
          Length = 440

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 54/399 (13%), Positives = 114/399 (28%), Gaps = 45/399 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +L D   +   +D            +  A K  +   +   + +      + S  E
Sbjct: 32  GTPLWLYDAATIRAQIDRLRRFDV-----IRYAQKACSNLHILRLMREEGVHVDAVSEGE 86

Query: 63  VMLGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
           +              E   +     +      +      +   +   L++    A     
Sbjct: 87  IERALAAGYRVGGDDEPIVFTADLLNRSTLLRVVELGIPVNAGSPQMLDQVGRAA--PGH 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170
            + +RINP   +      +     S+ G   +        ++    ++ GL  H      
Sbjct: 145 PVWIRINPGFGHGHSRKTNTGGEHSKHGIWHEHLEESLALVDRHGLDLVGLHMHIGSGVD 204

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE------- 223
            +    ++ + + K+       I  IS GGG+         +    R  E  +       
Sbjct: 205 -YGHLESVCETMVKQVRMAGRDIRAISAGGGLSVPYTPGDPEIDTDRYFELWDAARRELV 263

Query: 224 ---KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279
               + V++ +EPG  +V     L   V        N  + VD+     +   +      
Sbjct: 264 SELGHPVRLEIEPGRFLVAGAGVLAAEVRAQKPVGSNYFVLVDAGFNDLMRPAMYGSNHR 323

Query: 280 TIY-------PNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAG 325
                       +     ++ G  C +GD+F        E        +GD + F D   
Sbjct: 324 VSVLDADGAPRASDARDTVLAGPLCESGDVFTQVEGGDVEPVPLPRTDVGDLVVFHDTGA 383

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  + +N   +    + +   T    R  +  +   
Sbjct: 384 YGASMSSTYNSRPLIPEVLVDGAETRLIRRRQTVAELLA 422


>gi|325695049|gb|EGD36952.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK150]
          Length = 416

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 56/392 (14%), Positives = 116/392 (29%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   +S  
Sbjct: 19  PTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGCGVDCASYV 78

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++  +  F  +   ++       E         TI  +    +   K+ A        
Sbjct: 79  ELLMSQKLGFARQDIMFSSNNTPAEEFQFARDLGATINLDAYEDVAFLKEAAGIPKVISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCEN---- 169
                 V      + D     ++ G      I++  +         G+            
Sbjct: 139 RYNPGGVFELGTSIMDNP-EEAKFGMTKDQLIQAFKELKELGAEKFGIHAFLASNTVSND 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227
                   + +   +       ++++I+L GG+    +    ++    + +   +     
Sbjct: 198 YYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPEGEENDIAVIGQGVRQAYEAI 257

Query: 228 ---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                    +IY E G  ++     L T V    +  +  + VD+S    +   +     
Sbjct: 258 LTPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKQTYRTYLGVDASAVNLLRPAMYGSYH 317

Query: 279 A---TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                  P        V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HITNMDRPMGETEIVDVVGSLCENNDKFAINRPLPVSQIGDTLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                +  +   DG ++ IR      DY+  L
Sbjct: 378 AKLRSSEILLEQDGNVRMIRRAEKPEDYFATL 409


>gi|323978545|gb|EGB73627.1| diaminopimelate decarboxylase [Escherichia coli TW10509]
          Length = 420

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 57/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGH-EKFGG----ETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                 +      +   +     D      +S     +   +V  L++    +     ++
Sbjct: 82  RALVAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G          D I+     + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                    + +    F   ++ IS GGG+             + Y       R +    
Sbjct: 200 HLEQVCGAMVRQVL-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V++ +EPG  +V     L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVKLEIEPGRFLVAQAGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     +      +V G  C +GD+F        E      VK GD +   D   Y
Sbjct: 319 ALASDGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
             +  + +N   +    + +        R  + 
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411


>gi|157413561|ref|YP_001484427.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT
           9215]
 gi|157388136|gb|ABV50841.1| Diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT
           9215]
          Length = 455

 Score =  196 bits (499), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 53/397 (13%), Positives = 112/397 (28%), Gaps = 35/397 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P Y++D+  L  +        +         + A K  ++  M + ++    G  + S
Sbjct: 49  DSPLYILDESTLRKSCRAYKKALEKYYPGESLPIYASKANSSIFMSNLVSSEGLGLDAVS 108

Query: 60  LYEVMLGHEK-FGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             E++   +     E   ++     D EID  + N   II +    L + +  +  L+  
Sbjct: 109 EGELLTALKGGVPNEKIVFHGNNKSDKEIDFAIRNNIKIIVDNDYDLKRLEGISNLLNHD 168

Query: 118 IGLRIN--PSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCE 168
           + + I   P +              S+ G   ++           +  N+ G+  H   +
Sbjct: 169 LEIMIRFTPGIECHTHEYIKTGSFDSKFGFGIENLNNLFASISETKHLNLKGIHAHIGSQ 228

Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDF---------CQ 216
                    + + +         F   I  +++GGG+                       
Sbjct: 229 IFELDPHKDLGEIMVNVILDAKKFGHNIRELNVGGGLGIKYTQNDDPPSIDEWVKTISAS 288

Query: 217 RLKEFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDY 272
            ++   +       L  EPG +IV+        +    E             +  +    
Sbjct: 289 VVEACKKHNLDLPILMCEPGRSIVSTAGITIYKIGAFKEIPGIRTYFSVDGGMSDNPRPI 348

Query: 273 LLYQESATIY-----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
                 +                 + G+ C +GD+          K GD I       YN
Sbjct: 349 TYQSNYSACLVKNPFNINSKNKYTIAGKHCESGDVLFRDIELANCKTGDLICVFGTGAYN 408

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            +  + +N I  P   +          +     D   
Sbjct: 409 NSMSSNYNRIPRPAAILVCDGEAEIIQKRERPFDLLR 445


>gi|313156978|gb|EFR56410.1| diaminopimelate decarboxylase [Alistipes sp. HGB5]
          Length = 386

 Score =  196 bits (499), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 71/371 (19%), Positives = 135/371 (36%), Gaps = 26/371 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+YL D   L   L++ +Y  K  G K+  A+K      +   + +Y  G   +S  E
Sbjct: 14  ETPFYLYDTALLRQTLESVVYESKKYGYKVHYAIKANYDDHLLAIIREYGLGIDCASGNE 73

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117
           +    E  F  +   Y    K  +        +   I   ++ +L      A +      
Sbjct: 74  LRKAVEAGFDPKGIVYAGIGKRDKELRYAIGQEIMAINCESIEELELVDRLAGEAGKKTD 133

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG-------EKCKDKIESEIKNVNGLMFHNNCENK 170
           + LRINP +        D  +  S+ G       E  K+    +  N+ G+  H   + +
Sbjct: 134 VALRINPDIDPKTNHCIDTGQADSKFGISYEEVLEHAKEIKSLKHINIVGIHLHIGSQIR 193

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEK 224
               F  M      I +          ++ +GGG+       ++ P+ +F          
Sbjct: 194 ELHVFENMCNKVNVIVENLEKLGFSFRFVDVGGGLGVNYDVPENEPIPNFASLFSIVHNH 253

Query: 225 Y---SVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDYLLYQES- 278
                 +++ E G +IV     L TTVL    +   + LVIVD+S+   +   L      
Sbjct: 254 LAVGDREVHFEFGRSIVAECGELITTVLFNKTTATGRKLVIVDASMTELIRPALYGSYHN 313

Query: 279 --ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                  +       + G +C + D+F E    +  + GD ++ +    Y ++  + +N 
Sbjct: 314 IENITSEDEVREKYTIVGTACESTDVFDENVTLRKTRRGDLLTLKSAGAYGMSMASRYNL 373

Query: 337 INMPTIAVKNV 347
            ++P     + 
Sbjct: 374 HDLPGAVYSDE 384


>gi|257482668|ref|ZP_05636709.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|401153|sp|P31851|TABA_PSESZ RecName: Full=Protein tabA
 gi|151571|gb|AAB41802.1| Homology with E.coli and P.aeruginosa lysA gene; product of unknown
           function; putative [Pseudomonas syringae]
 gi|331013522|gb|EGH93578.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 420

 Score =  196 bits (499), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 60/383 (15%), Positives = 125/383 (32%), Gaps = 29/383 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP+++ D++ ++           ++  +   A+K      +   L +   G   SS  E
Sbjct: 23  PTPFHIYDERAIVQTHRNVAQAFADSAFRQYFAVKALPTPAILSLLLKEGSGLDCSSPVE 82

Query: 63  VMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           +ML       G+   +        E    L     + F+  S L +       +  ++  
Sbjct: 83  LMLAERLGARGDDIVFTSNNTSLSEYQMALQAGALVTFDDRSMLEQVIALPDIVAFRVSP 142

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI---------KNVNGLMFHN-NCENK 170
               + S         N   S+ G    + ++S             ++G+M  N      
Sbjct: 143 HGVIARSSQ-----MGNAQQSKFGIPEAELVQSYREAWDRGARRFGIHGMMCANELSLEA 197

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF--------CQRLKEFS 222
           +      +++   +       ++E+I++GGG+    +                + LK+  
Sbjct: 198 AVQAGVQVIEVGARVAREAGIELEYINIGGGLGIPYRIDDQALDLTAYADALKRALKQAF 257

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
              + ++ +E G  I      L + V++     + +V +D+S+ A +   L         
Sbjct: 258 PHNTPKLLMELGRYISGPHGVLVSRVINRCSKGREIVGLDASMSALMRPGLYGAYHHLTL 317

Query: 283 PNTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
           P           V G  C   D F          IGD     D   +       +NG   
Sbjct: 318 PFADQRPEGVFDVVGALCENFDKFAVDRLLPSPLIGDLALIHDTGAHGHAMGFTYNGRLR 377

Query: 340 PTIAVKNVDGT-IKAIREFSYND 361
           P   +   DG  ++  R  +++D
Sbjct: 378 PAELMLTDDGDVVEIRRAETFDD 400


>gi|25027833|ref|NP_737887.1| putative diaminopimelate decarboxylase [Corynebacterium efficiens
           YS-314]
 gi|259506224|ref|ZP_05749126.1| diaminopimelate decarboxylase [Corynebacterium efficiens YS-314]
 gi|24636795|sp|Q8RQM6|DCDA_COREF RecName: Full=Diaminopimelate decarboxylase; Short=DAP
           decarboxylase
 gi|20065737|dbj|BAB88825.1| diaminopimelate decarboxylase [Corynebacterium efficiens]
 gi|23493116|dbj|BAC18087.1| putative diaminopimelate decarboxylase [Corynebacterium efficiens
           YS-314]
 gi|259166201|gb|EEW50755.1| diaminopimelate decarboxylase [Corynebacterium efficiens YS-314]
          Length = 459

 Score =  196 bits (499), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 54/402 (13%), Positives = 115/402 (28%), Gaps = 41/402 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +++D+                   ++  A K F +  +   +++       +S  E
Sbjct: 56  GTPLFVVDEDDFRARCRDMASAFGGPD-RVHYASKAFLSKTVARWVDEEGLSLDIASENE 114

Query: 63  VMLGHEK-FGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           + +     F GE    +   KD         +N   ++ ++  +L      A  +   + 
Sbjct: 115 LGIALAADFPGERITAHGNNKDASFLRACVRNNLGHVVLDSAQELELLDYIAAGEGKVQP 174

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168
           + +R+ P +          +    + G               + +E   + GL  H   +
Sbjct: 175 VLIRVKPGIEAHTHEFIATSHEDQKFGFSLASGAAFDAARAAVNAENLELVGLHCHVGSQ 234

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD-----------KDYPVKD 213
                 F      +L+   +        +  + LGGG                  + +  
Sbjct: 235 VFDAQGFSLAAERVLELYSRIHDELGVTLAELDLGGGYGIAYTAAEEPLNVVEVAHDLLT 294

Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS------VEA 267
              +        +  + +EPG AI   +T     V  I +   +             +  
Sbjct: 295 AVGKTAAELGIEAPTVLVEPGRAIAGPSTVTVYEVGTIKDVDVDDETTRRYISVDGGMSD 354

Query: 268 HVPDYLL---YQESATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFED 322
           ++   L    Y          G  T   V G  C +GDI          +  GD ++   
Sbjct: 355 NIRPALYGAEYDARVVSRFTEGETTNTRVVGSHCESGDILINEATYPSDIHTGDLLALAA 414

Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              Y     + +N    P +           +R  + +D  +
Sbjct: 415 TGAYCYAMSSRYNAFARPAVVSVRAGAAKLMLRRETLDDILS 456


>gi|219850262|ref|YP_002464695.1| diaminopimelate decarboxylase [Chloroflexus aggregans DSM 9485]
 gi|219544521|gb|ACL26259.1| diaminopimelate decarboxylase [Chloroflexus aggregans DSM 9485]
          Length = 444

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 64/397 (16%), Positives = 125/397 (31%), Gaps = 36/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP YL+D+  L   +               ++  A K      +   + Q   G    S
Sbjct: 34  GTPLYLLDEVTLRGAMRAYRQAFAATYPGPFRVHYAGKALLNTALAQIVAQEGLGLDVVS 93

Query: 60  LYEVMLGH-EKFG-GETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
             E+++           H +  A  D E   A+      I+ + + +L + +  + +L +
Sbjct: 94  ATELLVARRAGMPMAHVHLHGNAKSDAELERALTWQVGAIVVDNLDELARLRAMSARLAE 153

Query: 117 KIG--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNC 167
             G  LRI P++              ++ G       E+  + +        GL  H   
Sbjct: 154 PQGVLLRIAPAIEADTHSHIATGGEAAKFGLPLAALDEAVAQTLAAPGLRWLGLHAHIGS 213

Query: 168 ENKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLK 219
           +  +     A ++       +    F      +S GGG+               + Q + 
Sbjct: 214 QLFALDQVVATVEVLVSQAARLRERFGVTPVELSPGGGLGVPYTADQPSTDRFRYAQVVS 273

Query: 220 EFSEKYSVQIYL-------EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY 272
           E  +    +  L       EPG +IV         V  +    +  + VD  +  ++   
Sbjct: 274 EALQAACARYNLPLPRLTVEPGRSIVARAGVALYRV--VGRKGRRWLNVDGGMADNIRPA 331

Query: 273 LLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
           L     + +  N           V GR C +GD+        P + GD I+      Y +
Sbjct: 332 LYGARYSAVLANRAGEPAGEPVAVGGRYCESGDVLLREIALPPAQPGDLIAVATAGAYTL 391

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           +  + +N +  P + +          R  + +D    
Sbjct: 392 SMSSNYNLVPRPALVLVGNGRAHVIQRRETEDDVLAR 428


>gi|126436459|ref|YP_001072150.1| diaminopimelate decarboxylase [Mycobacterium sp. JLS]
 gi|126236259|gb|ABN99659.1| diaminopimelate decarboxylase [Mycobacterium sp. JLS]
          Length = 474

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 60/406 (14%), Positives = 122/406 (30%), Gaps = 45/406 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ID+    +            G  +  A K F    +   +++       +S  E
Sbjct: 64  GTPVFIIDEADFRSRCREISAAFGG-GEYVRYAAKAFLCTEVARWIDEEGLALDVASGGE 122

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F  E  A +      D    AV S    ++ +++ ++ +  + A      + 
Sbjct: 123 LAVALHAGFPAERIALHGNNKSPDELALAVKSGVGHVVVDSMIEIERLDEIAAAAGVVQD 182

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G            +   E++   + GL  H   +
Sbjct: 183 VLVRVTVGVEAHTHEFISTAHEDQKFGLSLASGAAMAAVRRVFETDNLRLVGLHSHIGSQ 242

Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F          +      F       +  + LGGG+  +            L  
Sbjct: 243 IFDVAGFELAAHRVIGLLRDVVAEFGVDKTAQMSTVDLGGGLGISYLPQDDPPPVADLAA 302

Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDS 263
                           + ++ +EPG AI    T     V  + +        +  V VD 
Sbjct: 303 KLSAIVREESAAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVAVASDRYRRYVSVDG 362

Query: 264 SVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRI 318
            +  ++   L   E      +   +  P  + V G+ C +GDI     +    V  GD +
Sbjct: 363 GMSDNIRTSLYGAEYDVRLVSRVSDADPALSRVVGKHCESGDIVVRDAWLSGDVAPGDLL 422

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
                  Y  +  + +N I  P +           +R  + +D  +
Sbjct: 423 GVAATGAYCYSMSSRYNLIGRPAVVAVRDGHARLILRRETVDDLLS 468


>gi|108800861|ref|YP_641058.1| diaminopimelate decarboxylase [Mycobacterium sp. MCS]
 gi|119870001|ref|YP_939953.1| diaminopimelate decarboxylase [Mycobacterium sp. KMS]
 gi|108771280|gb|ABG10002.1| diaminopimelate decarboxylase [Mycobacterium sp. MCS]
 gi|119696090|gb|ABL93163.1| diaminopimelate decarboxylase [Mycobacterium sp. KMS]
          Length = 474

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 60/406 (14%), Positives = 122/406 (30%), Gaps = 45/406 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ID+    +            G  +  A K F    +   +++       +S  E
Sbjct: 64  GTPVFIIDEADFRSRCREISAAFGG-GEYVRYAAKAFLCTEVARWIDEEGLALDVASGGE 122

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F  E  A +      D    AV S    ++ +++ ++ +  + A      + 
Sbjct: 123 LAVALHAGFPAERIALHGNNKSPDELALAVKSGVGHVVVDSMIEIERLDEIAAAAGVVQD 182

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G            +   E++   + GL  H   +
Sbjct: 183 VLVRVTVGVEAHTHEFISTAHEDQKFGLSLASGAAMAAVRRVFETDNLRLVGLHSHIGSQ 242

Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F          +      F       +  + LGGG+  +            L  
Sbjct: 243 IFDVAGFELAAHRVIGLLRDVVAEFGVDKTAQMSTVDLGGGLGISYLPQDDPPPVADLAA 302

Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDS 263
                           + ++ +EPG AI    T     V  + +        +  V VD 
Sbjct: 303 KLSAIVREESAAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVAVASDRYRRYVSVDG 362

Query: 264 SVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRI 318
            +  ++   L   E      +   +  P  + V G+ C +GDI     +    V  GD +
Sbjct: 363 GMSDNIRTSLYGAEYDVRLVSRVSDADPALSRVVGKHCESGDIVVRDAWLSGDVAPGDLL 422

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
                  Y  +  + +N I  P +           +R  + +D  +
Sbjct: 423 GVAATGAYCYSMSSRYNLIGRPAVVAVRDGHARLILRRETVDDLLS 468


>gi|33240555|ref|NP_875497.1| diaminopimelate decarboxylase [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
 gi|33238083|gb|AAQ00150.1| Diaminopimelate decarboxylase [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
          Length = 455

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 52/397 (13%), Positives = 107/397 (26%), Gaps = 34/397 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP Y++D+  L  +                  L A K  ++  + + +     G    S
Sbjct: 48  GTPLYILDELTLRTSCREYKDALSKYYPGDSIPLYASKANSSLIISNIVASEGMGVDVVS 107

Query: 60  LYEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LH 115
             E++   +          +       E+     N   I+ +    +++ ++        
Sbjct: 108 EGELITALKGGVESSNIVFHGNNKSKSELIMAYKNDVIIVLDNQYDIDQLREIVPFGKRK 167

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCE 168
            K+ LR  P +              S+ G    +         + E   + GL  H   +
Sbjct: 168 AKLMLRFTPGIECHTHEYIKTGHIDSKFGFDPDELESIFLQFKDIEWGELIGLHAHIGSQ 227

Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDF---------CQ 216
                    +   +             +  ++LGGG+                       
Sbjct: 228 IFEVQPHKDLADVMASALQTGRKLGHSLNALNLGGGLGIRYIASDDPPSISDWVEVIAAA 287

Query: 217 RLKEFSEKYSVQI--YLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDY 272
            +K   E+         EPG +IV +       +    E         VD  +  +    
Sbjct: 288 VVKACRERSLDLPLLMCEPGRSIVGSAGLTLYKIGSRKEIPGIKTYLSVDGGMSDNPRPI 347

Query: 273 LLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
               E +    +           + G+ C +GD+  +         GD +       YN 
Sbjct: 348 TYQSEYSACLVDKPLIRADEVVTIAGKHCESGDVLLKDFRLPRSNSGDVLGVFSTGAYNF 407

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           +  + +N I  P   +     +    +     D   N
Sbjct: 408 SMSSNYNRIPKPAAIIVGNGESELIQKRELPEDLLRN 444


>gi|257065485|ref|YP_003145157.1| diaminopimelate decarboxylase [Slackia heliotrinireducens DSM
           20476]
 gi|256793138|gb|ACV23808.1| diaminopimelate decarboxylase [Slackia heliotrinireducens DSM
           20476]
          Length = 432

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 59/393 (15%), Positives = 117/393 (29%), Gaps = 29/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D+  +  N++        N G K   A+K      + + L +Y  G   SS  
Sbjct: 20  PTPFHLYDEAGIRKNMEAVRDAFAWNPGFKEYFAVKANPNPFIINILKEYGCGCDCSSFT 79

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+M+       G    ++       +          + F+ ++ +  ++     + + + 
Sbjct: 80  ELMISEAVGITGHDIMFSSNDTPAEDFVLADKLGALVNFDDITHIEFYEQLTGHIPETVC 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-IKNVNGLMFH---------NNCEN 169
            R NP   +            ++ G       E+  +    G                  
Sbjct: 140 CRFNPGGLFEMANGIMDAPGDAKYGMTADQLREAFRMCKAKGAKHFGIHAFLASNTVTNE 199

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                   + +            I +I+L GG+          +  + + E   +   + 
Sbjct: 200 YYPQLAGVLFQLAVDIARETDVHIAFINLSGGVGVAYSPDQEPNDIRAIGEGVRRVYDEV 259

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     IY E G  ++     L T  +      K  + VD++    +   +     
Sbjct: 260 LVPAGMGDVAIYTEMGRFMLAPYGCLVTRAIHEKHTYKEYIGVDANAVNLIRPAMYGAYH 319

Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        +++GD +   D   +       +
Sbjct: 320 HITVAGKEDAPCDHVYDVVGNLCENNDKFAVDRSLPEIEMGDLLVIHDAGAHGHAMGYNY 379

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       +   DGT K IR     +DY+  L
Sbjct: 380 NGRLKSAEVLLQTDGTPKLIRRAERPSDYFATL 412


>gi|227487947|ref|ZP_03918263.1| diaminopimelate decarboxylase [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227092038|gb|EEI27350.1| diaminopimelate decarboxylase [Corynebacterium glucuronolyticum
           ATCC 51867]
          Length = 463

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 60/403 (14%), Positives = 118/403 (29%), Gaps = 42/403 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +++D+    +               +  A K F    +   +N        +SL E
Sbjct: 61  GTPLFVVDEDDFRSRCQAMAAAFGAEN--VHYAAKAFLTKAIARWVNDEGLHLDVASLGE 118

Query: 63  VMLGHE-KFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + +     F  E    +   K        V S   T++ +   ++    D+A        
Sbjct: 119 LQVALATGFPAERITAHGNNKTVAYMDKVVSSGVGTVVLDAPGEIGLLNDRAALAGVTQN 178

Query: 120 LRIN--PSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNNCE 168
           + +   P +      +        + G           C+  +++   ++ GL  H   +
Sbjct: 179 VMVRVKPGIEAHTHEMIATAHEDQKFGFSLASGSAYAACEKALDAVHLDLVGLHCHVGSQ 238

Query: 169 NKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDF--------CQ 216
                 FS   + +   F          +  + LGGG       +               
Sbjct: 239 VFDAEGFSQAAERVLTLFVKLHDERRVTLTTLDLGGGFGIAYTAHSRPLRVEDVAEDLIA 298

Query: 217 RLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS------VEA 267
           R++   EK +    +I +EPG +I   TT     V  + +                 +  
Sbjct: 299 RVQRRCEKLNLDVPRIMVEPGRSIAGPTTVTVYEVGQVKDVHVTDTQTRRYVAVDGGMSD 358

Query: 268 HVPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFED 322
           ++   L   E      N      P    V G  C +GDI      + + V  GD ++   
Sbjct: 359 NLRPALYQAEYDLRLVNRSASGAPIPTRVVGSHCESGDILITNEAYPEDVATGDLVATAA 418

Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              Y     + +N +  P +           ++  +  D   N
Sbjct: 419 TGAYCYAMSSRYNMMLRPAVVSVKDGKARLMVKRETIEDVLEN 461


>gi|290968322|ref|ZP_06559864.1| putative diaminopimelate decarboxylase [Megasphaera genomosp.
           type_1 str. 28L]
 gi|290781681|gb|EFD94267.1| putative diaminopimelate decarboxylase [Megasphaera genomosp.
           type_1 str. 28L]
          Length = 417

 Score =  196 bits (498), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 63/393 (16%), Positives = 114/393 (29%), Gaps = 30/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+++ D+Q +++N+   L         K   A+K      +   L     G   SS+ 
Sbjct: 21  PTPFHIYDEQAMIDNVRQFLRAFSWAPSFKEYFAVKATPNPYIMKLLKAEGVGADCSSMA 80

Query: 62  EVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+ML       G    ++                  I  + +S +   +  A    +   
Sbjct: 81  ELMLCEKVGITGRDIVFSSNDTPYAEYQKALAMGALINLDDISMIAYLEQHASLPERICA 140

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFHNNCENKS---- 171
            R NP     +          ++ G   +   E+      K V     H    +      
Sbjct: 141 -RYNPGPLLQEGNAIIGKPEEAKYGMTREQIFEAFRILQAKGVRHFGLHTMVVSNELAVQ 199

Query: 172 --FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
                   M +       H    +E+I  GGGI    +          L +   ++   I
Sbjct: 200 GLIHTAKMMFELAADVQKHTGITVEFIDFGGGIGLPYRPEESFVSYDELSQGIRQHFETI 259

Query: 230 Y-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                        E G AI      L TT +      K  + VD+ +   +   +     
Sbjct: 260 MKPHGLGQVQLAFECGRAITGPYGYLVTTAIHHKHIWKEYIGVDACMANLMRPGMYGAYH 319

Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   + G  C   D F        ++ GD +   D   +  +    +
Sbjct: 320 HISVMGKEHLPKDHIYDISGSLCENCDKFAVDRALPEIEDGDILVIHDTGAHGHSMGFNY 379

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       +   DG ++ IR   +  D +  L
Sbjct: 380 NGKLRSAELLLQKDGKVRQIRRAETLEDLFATL 412


>gi|268593090|ref|ZP_06127311.1| diaminopimelate decarboxylase [Providencia rettgeri DSM 1131]
 gi|291311359|gb|EFE51812.1| diaminopimelate decarboxylase [Providencia rettgeri DSM 1131]
          Length = 419

 Score =  196 bits (498), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 59/400 (14%), Positives = 122/400 (30%), Gaps = 46/400 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P ++ D   ++  +     +       +  A K  +   +   + Q      S SL E
Sbjct: 25  GSPVWVYDSAVIIERIKQLQ-VFD----TVRFAQKACSNIHILRLMKQQGVKVDSVSLGE 79

Query: 63  VMLGH-EKFGGET----HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
           +       F          +     D    A ++  D  +   ++  L +  +  QK   
Sbjct: 80  IERALVAGFQPGRENSEIVFTADVLDRATLAKVTELDIPVNAGSIDMLEQIGE--QKAGH 137

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170
            + LRINP   +      +     S+ G   +D       I     ++ G+  H      
Sbjct: 138 PVWLRINPGFGHGHSQKTNTGGENSKHGIWHEDLSLALEKIRHYNLSLVGIHMHIGSGVD 197

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK------ 224
            +   + +  ++          +  IS GGG+    ++       Q      +       
Sbjct: 198 -YQHLADVCDSMVALVTTAGVDLHAISAGGGLSTPYREGDELIDVQHYYSLWDNARQRIE 256

Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA 279
               + +++ +EPG  +V  +  L   V  +     ++ V+VDS     +   +      
Sbjct: 257 QHLGHKIELEIEPGRYLVAESGVLLAEVRAVKDMGSRHYVLVDSGFNDLMRPAMYGSYHH 316

Query: 280 TIYPNTGPYTAM--------VCGRSCLAGDIFGE-------FHFEKPVKIGDRISFEDVA 324
                T              V G  C +GD+F +             VK+GD + F D  
Sbjct: 317 ISVLPTDGRNVDGAQLKDTIVAGPLCESGDVFTQLEGGLVVTRALPEVKVGDFLVFHDTG 376

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            Y  +  + +N   +    +          R  +  +   
Sbjct: 377 AYGASMSSNYNSRPLLPEVMFVNGKPQLIRRRQTIEELLA 416


>gi|149919596|ref|ZP_01908075.1| Diaminopimelate decarboxylase (DAP decarboxylase) [Plesiocystis
           pacifica SIR-1]
 gi|149819539|gb|EDM78967.1| Diaminopimelate decarboxylase (DAP decarboxylase) [Plesiocystis
           pacifica SIR-1]
          Length = 430

 Score =  196 bits (498), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 57/395 (14%), Positives = 123/395 (31%), Gaps = 36/395 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D+  +      A     +    +  A K F    + +  ++       +S  E
Sbjct: 36  GTPLFVHDEDHIRARCRQAREAFPDG---VAYASKAFLCRAIAELAHEEGMHIDVASGGE 92

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117
           + L        +    +   K               ++ ++  +L++ +    +     +
Sbjct: 93  MHLALQAGVPADRLVLHGNNKSTAELRYALEQRVHRVVVDSFDELDRIEALVAEGLPAPR 152

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
           + LRI P V  +        +  S+ G            +    S    + GL  H   +
Sbjct: 153 VLLRITPGVKANTHEFIQTGQDDSKFGFGVRVGHADRAIERAAASPAIELVGLHAHVGSQ 212

Query: 169 NKSFLCFSAMLKNIEKEFGHF------ITQIEWISLGGGIHFTD-KDYPVKDFCQRLKEF 221
                 F  + + +   F  F        ++E + +GGG+     +        +  +  
Sbjct: 213 VFEVGSFEKVAEVLAGIFARFQAKTGPNARMEELCIGGGLGVAYVEGEADCGIVEWGQAV 272

Query: 222 SEKYSVQIY-----LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL 274
               +          EPG +I+ ++     TV  I +       V     +  +    L 
Sbjct: 273 RRACAAAGISAKITAEPGRSIIASSAITLYTVGTIKDIPGVRTYVSVDGGMSDNPRPVLY 332

Query: 275 YQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNIN 329
                T  P       P T  + G+ C +GD+          +++GD IS      Y  +
Sbjct: 333 GSGYETFLPRATDADRPKTIRLVGKHCESGDLLVREGLVPADIRVGDIISTPVTGAYGYS 392

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             + +N +  P +         + IR  +++D   
Sbjct: 393 LGSNYNKVPRPAVVFVKDGQARQVIRRETWDDLLR 427


>gi|288906000|ref|YP_003431222.1| diaminopimelate decarboxylase [Streptococcus gallolyticus UCN34]
 gi|288732726|emb|CBI14300.1| diaminopimelate decarboxylase [Streptococcus gallolyticus UCN34]
          Length = 414

 Score =  196 bits (498), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 59/388 (15%), Positives = 121/388 (31%), Gaps = 27/388 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   ++  
Sbjct: 19  PTPFHLYDEKGIREKARALNEAFAWNKGFKEYFAVKATPTPAILKILQEENCGVDCATEV 78

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E+++ H+    +    +      E         TI  +    +   K+ A      + LR
Sbjct: 79  ELLMSHKLGFTDIMFSSNDTPAREFRYAKEIGATINLDAYEHIAFLKEVAGLPET-VSLR 137

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVN--GLMFHNNCEN----KS 171
            NP   ++       N   S+ G      I+     + + V   G+              
Sbjct: 138 YNPGGVFALGTDIMDNPEESKFGMTKAQLIQGFKDLKAEGVKNFGIHSFLASNTVTNDYY 197

Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ--- 228
                 + +   +        + +I+L GG+    +     +    + +   +   +   
Sbjct: 198 PELARQLFELAVEVKEKTGVAVSFINLSGGVGVNYRPEQEPNDIAVIGKGVHRVFDEVLI 257

Query: 229 --------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280
                   I+ E G  ++ +   L T V    +  +  + VD+S    +   +       
Sbjct: 258 PAGLGDVKIFTELGRFMLASHGLLVTKVRHRKQTYRTYIGVDASAVNLMRPAMYDAYHHI 317

Query: 281 IY---PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                PN       V G  C   D F +       ++GD +   D   +  +    +NG 
Sbjct: 318 TNVSNPNGKLEVVDVVGSLCENNDKFAKQRELPEARVGDTLVIHDTGAHGFSMGYQYNGR 377

Query: 338 NMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
                 +   DG+ + IR   +  DY+ 
Sbjct: 378 LRSAEILYQEDGSARLIRRAETPEDYFA 405


>gi|331085004|ref|ZP_08334091.1| hypothetical protein HMPREF0987_00394 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330408704|gb|EGG88169.1| hypothetical protein HMPREF0987_00394 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 423

 Score =  196 bits (498), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 62/393 (15%), Positives = 121/393 (30%), Gaps = 29/393 (7%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           +  TP+++ D++ +  N+         N G K   A+K      +   L +Y  G   SS
Sbjct: 18  VYPTPFHIYDERGIRENVRALKEAFSWNKGYKEYFAVKATPNPFLIQILREYGCGCDCSS 77

Query: 60  LYEVML--GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             E+M+       G +    + A    E          I  +  + ++  +     + + 
Sbjct: 78  YTELMMSEAIGAVGEDIMFSSNATPAEEFVYADKLGGIINLDDFTHIDFLEKAIGHIPET 137

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNC 167
           I  R NP   +        N   ++ G   +   ++         +   ++  L  +   
Sbjct: 138 ISCRYNPGGLFQISNDIMDNPGDAKYGMTTEQLFDAFRILKEKGAKHFGIHAFLASNTVT 197

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
                +    + +   K        I++I+L GGI    +     +    + E   K   
Sbjct: 198 NEYYPMLAKVLFEVAVKLQKETGVHIKFINLSGGIGIPYRPDQEPNDIHAIGEGVRKVYE 257

Query: 228 Q-----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ 276
           +           IY E G  ++     L T  +      K  +  D+     +   +   
Sbjct: 258 EVLVPAGMGDVAIYTELGRFMMGPYGALVTRAIHEKHTHKEYIGCDACAVNLMRPAMYGA 317

Query: 277 ESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                          +   V G  C   D F        + IGD +   D   +      
Sbjct: 318 YHHITVMGKEDAPCDHKYDVTGSLCENNDKFAIDRMLPKIDIGDLLYIHDTGAHGFAMGY 377

Query: 333 WFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
            +NG       +   DG+++ IR   +  DYY 
Sbjct: 378 NYNGKLKSAELLLKEDGSVQMIRRAETPADYYA 410


>gi|270264865|ref|ZP_06193129.1| hypothetical protein SOD_j00800 [Serratia odorifera 4Rx13]
 gi|270041163|gb|EFA14263.1| hypothetical protein SOD_j00800 [Serratia odorifera 4Rx13]
          Length = 420

 Score =  196 bits (498), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 54/398 (13%), Positives = 118/398 (29%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +  D   +   +    +        +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWAYDAAIISERISQLRHFDV-----IRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
              +             +     D    A +S     +   ++  L++    +  +   +
Sbjct: 82  RALQAGFQPGGEPSDIVFTADVLDHATLARVSELKIPVNVGSIDMLDQLGQVS--VGHPV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172
            LRINP   +      +     S+ G    D       I+     + G+  H       +
Sbjct: 140 WLRINPGFGHGHSQKTNTGGENSKHGIWYADLPQAVEKIQQYGLKLIGVHMHIGSGVD-Y 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK---- 224
                +   + ++       I  IS GGG+        +    + +        E+    
Sbjct: 199 QHLERVCDAMVQQVIDLGHDISAISAGGGLSIPYQYGEEAIDTEHYFGLWNSARERIAAH 258

Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATI 281
             + V + +EPG  ++     L   V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVSLEIEPGRFLMAEAGVLVAEVRAVKDMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 282 Y--------PNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     +      ++ G  C +GD+F        E     PV++GD + F D   Y
Sbjct: 319 LLPADGRNTEHQPLRDTVIAGPLCESGDVFTQQAGGGIETRELPPVQVGDYLVFHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    +          R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFEKGEPRLIRRRQTIEELIA 416


>gi|26988802|ref|NP_744227.1| diaminopimelate decarboxylase [Pseudomonas putida KT2440]
 gi|24983601|gb|AAN67691.1|AE016399_8 diaminopimelate decarboxylase [Pseudomonas putida KT2440]
          Length = 410

 Score =  196 bits (498), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 51/398 (12%), Positives = 131/398 (32%), Gaps = 44/398 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P +  D + + + ++    +       +  A K      +   +  +     + SL E
Sbjct: 16  GSPLWAYDTRTIADRVEQL-NVFD----TVRFAQKANPNLHVLRLMRAHGLVLDAVSLGE 70

Query: 63  VMLGHE------KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
           +                      A     ++ V+++   +   ++  L++  +++     
Sbjct: 71  MERAFAAGASVDGDPAGVVLTCDALDRPTLERVVASKIEVNAGSIDMLHQLGERS--PGH 128

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170
           ++ +RINP   +      +     S+ G   ++       I++   ++ G+  H      
Sbjct: 129 RVWIRINPGFGHGHSRKTNTGGENSKHGIWHEELDEALACIKAHGLHLVGVHMHIGSGVD 188

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK-- 224
            +     + +++ +  G     IE  S+GGG+        K   ++ + Q      ++  
Sbjct: 189 -YQHLEQVARSMIELIGRLGVDIEAFSIGGGLSTPYRSTDKPVDLQRYAQTWAVARKEIE 247

Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESA 279
               + V++ +EPG  +V  +  L   V  + +      VI+D+     +   +      
Sbjct: 248 AMLGHPVRMEIEPGRFLVAESGYLVAEVRAVKQVGRNTFVIIDAGFNDLMRPAMYGAYHG 307

Query: 280 TIY-------PNTGPYTAMVCGRSCLAGDIFGEF------HFEKPVKIGDRISFEDVAGY 326
                      +      +V G  C +GD+F +             ++GD +   D   Y
Sbjct: 308 MTLLDADGQAVDRPRQPTVVAGPLCESGDVFTQDDQALTPQDLPQAQVGDLLVIHDAGAY 367

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    +          R  +  D  +
Sbjct: 368 GASMSSNYNSRPLLPEFLIENGALRMIRRRQTVQDLLS 405


>gi|284928894|ref|YP_003421416.1| diaminopimelate decarboxylase [cyanobacterium UCYN-A]
 gi|284809353|gb|ADB95058.1| diaminopimelate decarboxylase [cyanobacterium UCYN-A]
          Length = 478

 Score =  196 bits (498), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 58/405 (14%), Positives = 125/405 (30%), Gaps = 43/405 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK---NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P Y++D++ L  +        K       +++ A K ++   +   +     G    S
Sbjct: 60  GSPLYILDEKTLRTSCKQYRDNFKLYYKGSSQVIYASKAWSCLSVVGIIATENLGFDVVS 119

Query: 60  LYE---VMLGHEKFGGETH-------AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109
             E   V +   K G            +       E++  +     I+ +   +L    +
Sbjct: 120 GGEFHTVQIAMSKLGYSEIEIANRVYFHGNNKSLDELELAIKANCNIVVDNWLELQNLVE 179

Query: 110 KAQKLHK---KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVN 159
               L +   +I LR+ P +              S+ G    D        I+ ++ N  
Sbjct: 180 LGSCLPEKSIRILLRLTPGIECHTHEYIKTGHVNSKFGFNLNDFETVINYVIKQKVLNCR 239

Query: 160 GLMFHNNCENKSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQ 216
           GL  H   +         +   + K           +  +++GGG+  +          +
Sbjct: 240 GLHSHIGSQIFEKQPHRDLAFILVKLLKKSQELGLTLSELNIGGGLGISYTSDDNPPSIE 299

Query: 217 RLKEFSEKYSVQ-----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDS 263
              +   +  ++           +  EPG +++ +      TV    E         +D 
Sbjct: 300 EWVKNVSESVMEACLDSNLSFPKLIAEPGRSLIGSAGVTAYTVGSRKEIPGLHTYLAIDG 359

Query: 264 SVEAHVPDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319
            +  +          + +  N        T ++ G+ C +GDI  +         GD + 
Sbjct: 360 GMSDNPRPITYQSLYSILIGNKMSEKITETFIIAGKHCESGDIIIKDAQLPQTHTGDILV 419

Query: 320 FEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
                 YN +  + +N I  P   + N       +R  +Y+D   
Sbjct: 420 VMGTGAYNYSMASNYNRIPRPAAVLVNHGEANLIVRRETYDDLVK 464


>gi|327490088|gb|EGF21876.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK1058]
          Length = 416

 Score =  196 bits (498), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 56/392 (14%), Positives = 117/392 (29%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   +S  
Sbjct: 19  PTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGCGVDCASYV 78

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++  +  F G+   ++       E         TI  +    +   K+ A        
Sbjct: 79  ELLMSQKLGFAGQDIMFSSNNTPAEEFQFARDLGATINLDAYEDVAFLKESAGIPKIISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCEN---- 169
                 V      + D     ++ G      I++  +         G+            
Sbjct: 139 RYNPGGVFELGTSIMDNP-EEAKFGMTKDQLIQAFKELKELGAEKFGIHAFLASNTVIND 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227
                   + +   +       ++++I+L GG+    +    ++    + +   +     
Sbjct: 198 YYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPEGEENDIAVIGQGVRQAYEAI 257

Query: 228 ---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                    +IY E G  ++     L T V    +  +  + VD+S    +   +     
Sbjct: 258 LTPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKQTYRTYLGVDASAVNLLRPAMYGSYH 317

Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                +          V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HITNMDRPEGETEIVDVVGSLCENNDKFAINRALPVSQIGDTLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                +  +   DG ++ IR      DY+  L
Sbjct: 378 AKLRSSEILLEQDGNVRMIRRAEKPEDYFATL 409


>gi|40062569|gb|AAR37506.1| diaminopimelate decarboxylase [uncultured marine bacterium 159]
          Length = 418

 Score =  196 bits (497), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 71/394 (18%), Positives = 124/394 (31%), Gaps = 33/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYM--DGTTSS 58
            TP Y    + + NNLD      +      ++  A+K      +   ++QY+   G   S
Sbjct: 24  GTPLYTYFGEIICNNLDRIDTALRANFDKYQIYFAVKSNNNPNLLAFMHQYLPTLGADCS 83

Query: 59  SLYEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
           S  E+++    +   +   Y   Y+  +      N    I  +  +   + K+    + +
Sbjct: 84  SPGELVVAERAEIPMKNCVYTGNYESMDDLQSAVNSGCEINLDDETSFIRLKNI--GIPE 141

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENK 170
            I  R+NP V   +F         ++ G   +         +       GL  H+     
Sbjct: 142 YISFRLNPGVGKGRFAEIVTGGREAKFGIPVEKIAAVYKSALADGVKTFGLQCHSGSAIL 201

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEW----ISLGGGIHFTDKDYPVKDF--------CQRL 218
               F    + I K   H    I+     IS+G G      D               +  
Sbjct: 202 DQNHFRENTELILKTARHIEDAIDHRLLKISIGSGFGIPYADDEDPLNFNDVFGLVAEIF 261

Query: 219 KEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY 275
           KEF  ++        +EPG A+V +   L   V  I ++ K  + +D+ +E  +   L  
Sbjct: 262 KEFYGQHQHDWPVLCIEPGRALVGDAAILLAQVTGIKDSYKTFIGLDAGMETLMRPALYG 321

Query: 276 Q----ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                            T  + GR C   D          V  GD I+  D   Y     
Sbjct: 322 AVHRIYKVGALMEEQNLTVDITGRICENTDRLAIDIPFPDVAEGDLIAIMDTGAYGYAMA 381

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + FN    P   + + D         +  D +  
Sbjct: 382 HQFNTRPRPAEVLIDKDKPHLIRSRETVEDIFRK 415


>gi|256826621|ref|YP_003150580.1| diaminopimelate decarboxylase [Cryptobacterium curtum DSM 15641]
 gi|256582764|gb|ACU93898.1| diaminopimelate decarboxylase [Cryptobacterium curtum DSM 15641]
          Length = 452

 Score =  196 bits (497), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 53/399 (13%), Positives = 116/399 (29%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            T  Y+ D++ L   +              +++ A K F    M     +       S  
Sbjct: 50  GTALYVYDEEDLRERMRAYRSSFNRLHPNSEVIYASKAFLNKAMARIAAEEGMSLDVSGG 109

Query: 61  YEVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+ +     F  +    +      +   +A+ +    I+ ++  +L +    A    + 
Sbjct: 110 GELAIARAAGFPADRVYVHGNNKTPEELEEAITAGVKCIVIDSRIELARVSQIAERHGIT 169

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNN 166
           + + +RI P V              S+ G             D + +    + G+  H  
Sbjct: 170 QDVFMRITPGVEADTHEYIRTGMEDSKFGFTMRDDFAFKCIDDVLAASHVRLAGIHMHIG 229

Query: 167 CENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRL---- 218
            +  +   +   +             +   I+ + +GGG+    +        +      
Sbjct: 230 SQIFALHSYREAVAVAVDFIARIKKTYDYTIDVLDVGGGVGIAYQASDQPASIEEFATLV 289

Query: 219 ---------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV 269
                    K   E   +        A +   T     +L     I+  V VD  +  ++
Sbjct: 290 CESVDEECAKAGIENLRILCEPGRSIAAIPGVTLYTVGILKTLPGIRKYVAVDGGMSDNI 349

Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L + +   +  N           +CG+ C +GD        +  ++GD +       
Sbjct: 350 RTALYHADFEAVLANKADQPRTEVVTLCGKHCESGDAVVLDGSLQHPELGDIVCVFGTGA 409

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  + +NG   P +            R  +Y D   
Sbjct: 410 YCQSMSSNYNGQVRPAVVFVRDGVARVVTRRQTYADLVA 448


>gi|254173501|ref|ZP_04880173.1| diaminopimelate decarboxylase [Thermococcus sp. AM4]
 gi|214032193|gb|EEB73023.1| diaminopimelate decarboxylase [Thermococcus sp. AM4]
          Length = 412

 Score =  196 bits (497), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 81/379 (21%), Positives = 133/379 (35%), Gaps = 37/379 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK---LLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP Y+ +  ++ +N        K AG +   +  A+K      +   + +   G  ++S
Sbjct: 31  GTPVYIYNLSRIRDNYLRMADALKKAGFREWRIHYAMKANNNKEVLGLIRELGGGIDATS 90

Query: 60  LYEVMLGHE-KFGGETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             EV L  E  F  E   +                   I F++VS L +F     +  +K
Sbjct: 91  PGEVKLAREIGFKDEDIIFTGTSLSNGDLEFLAKTNVLINFDSVSSLRRFNG---EEGRK 147

Query: 118 IGLRINPSVSYSKFILADPNRPFS-----RLGEK------CKDKIESEIKNVNGLMFHNN 166
           +GLRIN  V   +                + G          D IE +   ++ L  H  
Sbjct: 148 VGLRINTGVGIGRVEKTTTGGLEVGSIPVKFGISGKAIDRAFDLIEEKGLELHCLHHHVG 207

Query: 167 CEN------KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQ 216
            +       + F     +LK  EK    F   ++ I LGGG         +++PV +F Q
Sbjct: 208 SDWVGEKIARYFQALDNLLKVAEKAEARFGGSLKVIDLGGGYGVPHSAEEEEFPVYEFFQ 267

Query: 217 RLKEFSEKYSV---QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL 273
           R+KE  E+Y     ++ +EPG  +V++   L   V  + E    + +   +         
Sbjct: 268 RVKEHMEEYGFGDLKVIVEPGTYLVSDAGILVAQVNTVEEKNGRIFVGVDAGLNVFNSPA 327

Query: 274 LYQESATIYPN-----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
           LY     I             A V G  C +GDIF        ++ GD I+  +   Y  
Sbjct: 328 LYNYYHEIVVCNRVSSEEKMVATVVGNICESGDIFAVDRELPKIEEGDYIAILNAGAYGY 387

Query: 329 NRKNWFNGINMPTIAVKNV 347
              N +N        V   
Sbjct: 388 VMANNYNLRPKGKEVVVGG 406


>gi|67922226|ref|ZP_00515740.1| Diaminopimelate decarboxylase [Crocosphaera watsonii WH 8501]
 gi|67855929|gb|EAM51174.1| Diaminopimelate decarboxylase [Crocosphaera watsonii WH 8501]
          Length = 474

 Score =  196 bits (497), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 52/404 (12%), Positives = 119/404 (29%), Gaps = 43/404 (10%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRK---NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           +P Y++D+  L           K       +++ A K +++  +   +     G    S 
Sbjct: 61  SPLYILDETTLRTACHQYRDGFKTYYQGESQVIYASKAWSSLAVVGVIATENLGFDVVSG 120

Query: 61  YEV---MLGH-------EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK 110
            E+              ++   + + +       E++  L    TII +   +L      
Sbjct: 121 GELYTTQKALTQLGYSCQEIAQKIYFHGNNKSVAELEQALEMGCTIIVDNWLELQTLVQL 180

Query: 111 ---AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNG 160
                     I +R+ P +              S+ G              E +  +  G
Sbjct: 181 GETIPNQKTPILIRLTPGIECHTHEYIRTGHLDSKFGFDPNQLETVFSYIAEQKSLDCRG 240

Query: 161 LMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQR 217
           L  H   +         +   + +       +   +  +++GGG+     +       + 
Sbjct: 241 LHAHIGSQIFERQPHQDLAGVLVEWLKIGQEYGLTLSELNIGGGLGIRYTEDDDPPSIEE 300

Query: 218 LKEFSEKYSVQ-----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS-- 264
             + + +  ++           +  EPG +++ +      TV    E       V     
Sbjct: 301 WIKAASEAVMKACQRSGIPLPKLIAEPGRSLIGSACVTAYTVGSSKEIPDIRTYVAVDGG 360

Query: 265 VEAHVPDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
           +  +          + +  N        T  V G+ C +GDI  +         GD +  
Sbjct: 361 MSDNPRPITYQSSYSVVLGNKMSAEINETVTVAGKHCESGDIVIKDAQLPQTHPGDILVI 420

Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
                YN +  + +N +  P   + N       ++  +Y+D   
Sbjct: 421 MGTGAYNYSMASNYNRLPRPAAVLVNNGEANLILKRETYDDLIR 464


>gi|71907276|ref|YP_284863.1| diaminopimelate decarboxylase [Dechloromonas aromatica RCB]
 gi|71846897|gb|AAZ46393.1| diaminopimelate decarboxylase [Dechloromonas aromatica RCB]
          Length = 416

 Score =  196 bits (497), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 56/403 (13%), Positives = 117/403 (29%), Gaps = 48/403 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   +   +           V +  A K  +   +   + +      S SL E
Sbjct: 17  GTPLWIYDADTITRQIAALR----LFDV-VRFAQKANSNTHILRLMKRQGAVVDSVSLGE 71

Query: 63  VMLGHEKF-------GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKL 114
           +              G     +     D    A +   +  +   ++  L++    A   
Sbjct: 72  IERALAGGFTPGLHNGDADIVFTADLLDRATLARVVELNIPVNCGSMDMLDQLG--AVNP 129

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCE 168
              + LRINP   +      +     S+ G    D + +  K       + GL  H    
Sbjct: 130 GHPVWLRINPGFGHGHSKKTNTGGEHSKHGIWHGDLVRACEKIKANGLALQGLHMHIGSG 189

Query: 169 NKSFLCFSAMLKNIE--KEFGHFITQIEWISLGGGIHFTDKD-YPVKDFCQRLKEF---- 221
                        ++  +        +  IS GGG+    +   P  D       +    
Sbjct: 190 VDYAHLQEVCGAMLKLVEVVNAQGLDLHAISAGGGLSVPYQAGEPTIDTAHYFSLWDAVR 249

Query: 222 -----SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE-AHVPDYLLY 275
                  ++ V++ +EPG  ++  +  L T V    +   N  ++  +     V   L  
Sbjct: 250 HAVEQLLEHPVKLEIEPGRYLMAESGVLVTEVRATKQQGANHFVMVDAGFSDLVRPALYG 309

Query: 276 QESATIYPNTG-------PYTAMVCGRSCLAGDIFGE-------FHFEKPVKIGDRISFE 321
                   ++         +  +V G  C +GD+F +              ++GD +   
Sbjct: 310 AYHGMELIHSDGTAVNGLQFDTVVAGPLCESGDVFTQGDGGVLLHRSLPQAQVGDLLVLH 369

Query: 322 DVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           D   Y  +  + +N   +    +          R  +  +   
Sbjct: 370 DTGAYGASMSSNYNARPLIAEVLMENGEPRLIRRRQTVAELLA 412


>gi|328946843|gb|EGG40980.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK1087]
          Length = 416

 Score =  196 bits (497), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 57/392 (14%), Positives = 120/392 (30%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   +S  
Sbjct: 19  PTPFHLYDEKGVRERARALHKAFSWNPGFKEYFAVKATPNPAILKILKEEGCGVDCASYV 78

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++  +  F G+   ++       E         TI  +    +   K+ A        
Sbjct: 79  ELLMSQKLGFAGQDIMFSSNNTPAEEFQFARDLGATINLDAYEDVAFLKEAAGIPKIISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMF----HNNCEN 169
                 V      + D     ++ G      I++  +         G+      +    +
Sbjct: 139 RYNPGGVFELGTSIMDNP-EEAKFGMTKDQLIQAFKELKELGAEKFGIHALLASNTVSND 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227
                   + +   +       ++++I+L GG+    +    ++    + +   +     
Sbjct: 198 YYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPEGEENDIAIIGQGVRQAYEAI 257

Query: 228 ---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                    +IY E G  ++     L T V    +  +  + VD+S    +   +     
Sbjct: 258 LTPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKQTYRTYLGVDASAVNLLRPAMYGSYH 317

Query: 279 A---TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                  P+       V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HITNMDRPDGETEIVDVVGSLCENNDKFAINRPLPVSQIGDTLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                +  +   DG ++ IR      DY+  L
Sbjct: 378 AKLRSSEILLEQDGNVRMIRRAEKPEDYFATL 409


>gi|288550358|ref|ZP_05970120.2| diaminopimelate decarboxylase [Enterobacter cancerogenus ATCC
           35316]
 gi|288315601|gb|EFC54539.1| diaminopimelate decarboxylase [Enterobacter cancerogenus ATCC
           35316]
          Length = 431

 Score =  196 bits (497), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 56/398 (14%), Positives = 117/398 (29%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 38  PVWVYDAQIIREKIAALHQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 92

Query: 65  LGHE-KFGG----ETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                 F      +   +     D    A +      +   +V  L +    +     ++
Sbjct: 93  RALAAGFDPQSDSDAIVFTADLIDDATLARVHELHIPVNAGSVDMLEQLGQVS--PGHRV 150

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G          + ++     + G+  H        
Sbjct: 151 WLRVNPGFGHGHSQKTNTGGENSKHGIWHGDLPAALEVLQRYGLKLVGIHMHIGSGVDYG 210

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                    +++        +E IS GGG+               Y       R K  + 
Sbjct: 211 HLEQVCGAMVDQVLA-CGQDLEAISAGGGLSIPYREGEEAIDTDHYYGLWSAARDKIAAH 269

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATI 281
             ++V++ +EPG  +V  +  L   V  +     ++ V++D+     +   +        
Sbjct: 270 LGHAVKLEIEPGRFLVAESGVLVAQVRSVKEMGSRHFVLIDAGFNDLMRPSMYGSYHHIT 329

Query: 282 --------YPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     N      +V G  C +GD+F        E      VK GD +   D   Y
Sbjct: 330 ALAADGRDLLNAPRVETVVAGPLCESGDVFTQQEGGKVETRTLPEVKPGDYLVLHDTGAY 389

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    + +        R  +  +   
Sbjct: 390 GASMSSNYNSRPLLPEVLFDRGVARLIRRRQTIQELLA 427


>gi|60682355|ref|YP_212499.1| putative diaminopimelate decarboxylase [Bacteroides fragilis NCTC
           9343]
 gi|60493789|emb|CAH08579.1| putative diaminopimelate decarboxylase [Bacteroides fragilis NCTC
           9343]
          Length = 387

 Score =  196 bits (497), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 66/370 (17%), Positives = 123/370 (33%), Gaps = 27/370 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           + TP+Y  D + L + L      + +     +  A+K  A   +   + +   G    S 
Sbjct: 13  LPTPFYYYDTKVLRDTLACVNREVARYDNFSVHYAVKANANPKVLTIIRESGLGADCVSG 72

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115
            E+       F      +    K      +  + D   FN  +V +L    + A  +   
Sbjct: 73  GEIRAAIKAGFPAGKIVFAGVGKADWEIDLGLDYDIFCFNVESVPELEVINELAAAKGKV 132

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168
             +  RINP+V              ++ G    D        +E +     GL FH   +
Sbjct: 133 ANVAFRINPNVGAHTHANITTGLAENKFGISMHDMDKVIDVALELKHVKFIGLHFHIGSQ 192

Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD---YPVKDFCQRLKEFS 222
                 F+     +  ++ +       +E I++GGG+          P+ DF    + + 
Sbjct: 193 ILDMGDFIALCNRVNELQDKLEARHILVEHINVGGGLGIDYDHPNRQPIPDFADYFRTYD 252

Query: 223 EKY----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQE 277
           E         ++ E G AI     +L + VL + +       + D+ +   +   L    
Sbjct: 253 EHLKLRPHQTLHFELGRAITGQCGSLISKVLYVKQGTNKQFAILDAGMTDLIRPALYQAH 312

Query: 278 SATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                  +      T  V G  C + D+FG+      VK GD I+      Y     + +
Sbjct: 313 HKMENLTSQDPVVETYDVVGPICESSDVFGKAVDLNKVKRGDLIALRSAGAYGEIMASGY 372

Query: 335 NGINMPTIAV 344
           N   +P   +
Sbjct: 373 NCRELPKGYI 382


>gi|296104501|ref|YP_003614647.1| diaminopimelate decarboxylase [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295058960|gb|ADF63698.1| diaminopimelate decarboxylase [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 420

 Score =  196 bits (497), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 55/398 (13%), Positives = 118/398 (29%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIVREKIAALHQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D    A +      +   +V  L +    +     ++
Sbjct: 82  RALAAGFDPKTDPDAIVFTADLIDDATLARVHELQIPVNAGSVDMLEQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G          + ++     + G+  H       +
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYADMPAALEVLQRYNLKLVGIHMHIGSGVD-Y 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                +   + ++   F   +E IS GGG+               Y       R K  + 
Sbjct: 199 GHLEQVCGAMVRQVIDFGQDLEAISAGGGLSIPYREGEEAIDTDHYYGLWSAARDKVAAH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V++ +EPG  +V  +  L   V  +     ++ V++D+     +   +        
Sbjct: 259 VGHPVKLEIEPGRFLVAESGVLVAQVRSVKEMGSRHFVLIDAGFNDLMRPSMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     +      +V G  C +GD+F        E      VK GD +   D   Y
Sbjct: 319 ALAADGRDLTDAPRIDTVVAGPLCESGDVFTQHEGGKVETRALPEVKPGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    + +        R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGKARLIRRRQTIQELLA 416


>gi|171780260|ref|ZP_02921164.1| hypothetical protein STRINF_02048 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281608|gb|EDT47043.1| hypothetical protein STRINF_02048 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 413

 Score =  196 bits (497), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 61/388 (15%), Positives = 118/388 (30%), Gaps = 27/388 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   ++  
Sbjct: 19  PTPFHLYDEKGIREKARALNKAFAWNKGFKEYFAVKATPTPAILKILQEENCGVDCATEV 78

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E+++ H+    +    +      E         TI  +    +   K+ A      + LR
Sbjct: 79  ELLMSHKLGFTDIMFSSNNTPAREFKYAREIGATINLDAYEHIAFLKEVAGLPDT-VSLR 137

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVN--GLMFHNNCEN----KS 171
            NP   +S       N   S+ G      I+     + + V   G+              
Sbjct: 138 YNPGGVFSLGTDIMDNPEESKFGMTKDQLIQGFKDLKAEGVKNFGIHSFLASNTVTNDYY 197

Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ--- 228
                 + +   +        I +I+L GG+    +     +    + E   +   +   
Sbjct: 198 PELARQLFELAVEVKEKTGVMINFINLSGGVGVNYRPEQKANDIAVIGEGVHRVFDEVLV 257

Query: 229 --------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280
                   I+ E G  ++     L T V    +  +  + VD+S    +   +       
Sbjct: 258 PGGLGDVKIFTELGRFMLAPHGLLVTKVRHRKQTYRTYIGVDASAVNLLRPAMYDAYHHI 317

Query: 281 IYPNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                         V G  C   D F +       +IGD +   D   +  +    +NG 
Sbjct: 318 TNMTNSNGKLEVVDVVGSLCENNDKFAKQRELPEARIGDTLVIHDTGAHGFSMGYQYNGR 377

Query: 338 NMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
                 +   DG+ + IR   +  DY+ 
Sbjct: 378 LRSAEILYQEDGSARLIRRAETPEDYFA 405


>gi|332358336|gb|EGJ36162.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK355]
          Length = 416

 Score =  196 bits (497), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 57/392 (14%), Positives = 120/392 (30%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   +S  
Sbjct: 19  PTPFHLYDEKGIRERARALHKAFSWNPGFKEYFAVKATPNPAILKILKEEGCGVDCASYV 78

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++  +  F G+   ++       E         TI  +    +   K+ A        
Sbjct: 79  ELLMSQKLGFAGQDIMFSSNNTPAEEFQFARDLGATINLDAYEDVAFLKEAAGIPKIISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMF----HNNCEN 169
                 V      + D     ++ G      I++  +         G+      +    +
Sbjct: 139 RYNPGGVFELGTSIMDNP-EEAKFGMTKDQLIQAFKELKELGAEKFGIHALLASNTVSND 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227
                   + +   +       ++++I+L GG+    +    ++    + +   +     
Sbjct: 198 YYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPDGEENDIAVIGQGVRQAYEAI 257

Query: 228 ---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                    +IY E G  ++     L T V    +  +  + VD+S    +   +     
Sbjct: 258 LTPAGLGEVKIYTELGRFMLAPYGLLVTKVTHKKQTYRTYLGVDASAVNLLRPAMYGSYH 317

Query: 279 A---TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                  P+       V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HITNMDRPDGETEIVDVVGSLCENNDKFAINRSLPVSQIGDTLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                +  +   DG ++ IR      DY+  L
Sbjct: 378 AKLRSSEILLEQDGNVRMIRRAEKPEDYFATL 409


>gi|53714337|ref|YP_100329.1| diaminopimelate decarboxylase [Bacteroides fragilis YCH46]
 gi|253564815|ref|ZP_04842271.1| diaminopimelate decarboxylase [Bacteroides sp. 3_2_5]
 gi|265766209|ref|ZP_06094250.1| diaminopimelate decarboxylase [Bacteroides sp. 2_1_16]
 gi|52217202|dbj|BAD49795.1| diaminopimelate decarboxylase [Bacteroides fragilis YCH46]
 gi|251946280|gb|EES86657.1| diaminopimelate decarboxylase [Bacteroides sp. 3_2_5]
 gi|263253877|gb|EEZ25342.1| diaminopimelate decarboxylase [Bacteroides sp. 2_1_16]
 gi|301163826|emb|CBW23381.1| putative diaminopimelate decarboxylase [Bacteroides fragilis 638R]
          Length = 387

 Score =  196 bits (497), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 66/370 (17%), Positives = 123/370 (33%), Gaps = 27/370 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           + TP+Y  D + L + L      + +     +  A+K  A   +   + +   G    S 
Sbjct: 13  LPTPFYYYDTKVLRDTLACVNREVARYDNFSVHYAVKANANPKVLTIIRESGLGADCVSG 72

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115
            E+       F      +    K      +  + D   FN  +V +L    + A  +   
Sbjct: 73  GEIRAAIKAGFPAGKIVFAGVGKADWEIDLGLDYDIFCFNVESVPELEVINELAAAKGKV 132

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168
             +  RINP+V              ++ G    D        +E +     GL FH   +
Sbjct: 133 ANVAFRINPNVGAHTHANITTGLAENKFGISMHDMDKVIDVALELKHVKFIGLHFHIGSQ 192

Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD---YPVKDFCQRLKEFS 222
                 F+     +  ++ +       +E I++GGG+          P+ DF    + + 
Sbjct: 193 ILDMGDFIALCNRVNELQDKLEARHILVEHINVGGGLGIDYDHPNRQPIPDFADYFRTYD 252

Query: 223 EKY----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQE 277
           E         ++ E G AI     +L + VL + +       + D+ +   +   L    
Sbjct: 253 EHLKLRPHQTLHFELGRAITGQCGSLISKVLYVKQGTNKQFAILDAGMTDLIRPALYQAH 312

Query: 278 SATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                  +      T  V G  C + D+FG+      VK GD I+      Y     + +
Sbjct: 313 HKMENLTSEDPVVETYDVVGPICESSDVFGKAVDLNKVKRGDLIALRSAGAYGEIMASGY 372

Query: 335 NGINMPTIAV 344
           N   +P   +
Sbjct: 373 NCRELPKGYI 382


>gi|257784319|ref|YP_003179536.1| Diaminopimelate decarboxylase [Atopobium parvulum DSM 20469]
 gi|257472826|gb|ACV50945.1| Diaminopimelate decarboxylase [Atopobium parvulum DSM 20469]
          Length = 434

 Score =  196 bits (497), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 66/395 (16%), Positives = 120/395 (30%), Gaps = 31/395 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L +K +++            N G K   A+K      +   L +   G   ++  
Sbjct: 20  PTPFHLYNKAEIVRRAKLLQEAFSWNTGFKEYFAVKATPNPYIVKLLAELGCGCDCANAT 79

Query: 62  EVMLGHE-KFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNT--VSQLNKFKDKAQKLHKK 117
           E+ L       G+    +       +          I  +                + + 
Sbjct: 80  ELTLAKACGVTGQNIMLSSNDTTVLDFARAHELGAIINLDAGGDMLTTLEDAVGSTMPQV 139

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI----ESEIKNVN--GLMFHNNCENKS 171
           +  R+NP   +        N   ++ G   +         + K V   GL        + 
Sbjct: 140 MCARLNPGGVFESQNGIIGNPDDAKFGMTEEQLFQTFAYLKTKGVTEFGLHAFLASNAQE 199

Query: 172 FLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSE 223
              +      + +   K        I +I L GGI    +       V    Q +K   E
Sbjct: 200 EDYYPNLARVLFELAVKLHRELDIHIGFIDLSGGIGVAYEPNQVEPDVLAIGQGVKCAFE 259

Query: 224 KY-------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ 276
           +         V IY E G  ++     L T VL   E  ++ + VD+     +   +   
Sbjct: 260 EVLVPAGMGDVSIYTELGRWLLGPAGALVTRVLHQKETYRHYLGVDACAANLMRPAIYDA 319

Query: 277 ESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                          +T  V G  C   D F +      V +GD +   D   +  +   
Sbjct: 320 YHHITVMGKEDAPATHTYNVVGGLCENNDQFAKNRQLPKVAVGDLLFIHDTGAHGFSMGY 379

Query: 333 WFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
            +NG       +   DG+++ IR   +  DY+  L
Sbjct: 380 NYNGRLRSAELLLLEDGSVQLIRRAETEADYFATL 414


>gi|183984075|ref|YP_001852366.1| diaminopimelate decarboxylase LysA [Mycobacterium marinum M]
 gi|183177401|gb|ACC42511.1| diaminopimelate decarboxylase LysA [Mycobacterium marinum M]
          Length = 472

 Score =  196 bits (497), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 58/406 (14%), Positives = 120/406 (29%), Gaps = 45/406 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ID+    +            G  +  A K F    +   +N+       S+  E
Sbjct: 64  GTPLFVIDEDDFRSRCQEIAAAFGG-GHNVNYAAKAFLCSEIARWVNEEGLSIDVSTGGE 122

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + +     F  E    +   K       AV +    I+ +++ ++ +    A +      
Sbjct: 123 LAVALHANFPPERITLHGNNKSVAELTTAVKAGVGHIVLDSMIEIERLDAIAGEAGIVQD 182

Query: 120 LRIN--PSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + +     V               + G            +    ++   + GL  H   +
Sbjct: 183 VFVRLTVGVEAHTHEFISTAHEDQKFGLSISSGAAMAAVRRVFATDHLRLVGLHSHIGSQ 242

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQ--------IEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F      +       + +        +  + LGGG+  +            L +
Sbjct: 243 IFDVDGFELAAHRVIGLLREVVAEFGSEKTAQLATVDLGGGLGISYLSSDDPPPVGELAD 302

Query: 221 FSEKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDS 263
                             ++ +EPG AI    T     V  + +        +  V VD 
Sbjct: 303 KLGAIVSNESAAVGLPAPRLVVEPGRAIAGPGTITLYEVGTVKDVDVSATANRRYVSVDG 362

Query: 264 SVEAHVPDYLL---YQESATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318
            +  ++   L    Y        +  P T A V G+ C +GDI     +    ++ GD +
Sbjct: 363 GMSDNIRTALYDAQYDVRLVSRVSDAPATLARVVGKHCESGDIIVRDTWVPDDLQPGDLV 422

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +      Y  +  + +N I  P +           +R  + +D  +
Sbjct: 423 AVAATGAYCYSLSSRYNMIGRPAVVAVRAGKARLVLRRETVDDLLS 468


>gi|160893389|ref|ZP_02074175.1| hypothetical protein CLOL250_00939 [Clostridium sp. L2-50]
 gi|156864964|gb|EDO58395.1| hypothetical protein CLOL250_00939 [Clostridium sp. L2-50]
          Length = 421

 Score =  196 bits (497), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 66/393 (16%), Positives = 121/393 (30%), Gaps = 30/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +  N          N G K   A+K      +   L +   GT  SSL 
Sbjct: 19  PTPFHLYDEKGIRENARKLYQAFSWNKGFKEFFAVKATPNPTILRILKEEGCGTACSSLT 78

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+M+  +  F G+   ++       E         TI  +  + ++  +  A    K   
Sbjct: 79  ELMMSDKLGFTGDEIMFSSNDTPAEEFVLAKKLGATINLDDFTHIDFLEKTAGIPEKICC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFH------NNCEN 169
                        + D     ++ G      IE+      K V     H          +
Sbjct: 139 RYNPGGTFSISTTIMDNPG-DAKYGMTKDQIIEAYRILKGKGVKRFGMHAFLASNTVTND 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
              +    + +   +       ++++I+L GG+          +    + E   K   +I
Sbjct: 198 YYPVLARTLFEVAVEIKEKTGVKLDFINLSGGVGVPYTPDKEPNDILAIGEGVRKVYEEI 257

Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                      Y E G  ++     L TT +      K  + VD+     +   +     
Sbjct: 258 LVPAGMGDVALYTELGRFMLAPYGHLITTAIHEKHTHKEYIGVDACAVNLMRPAMYGAYH 317

Query: 279 ATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        + +GD +   D   +       +
Sbjct: 318 HITVLGKENEPCDHKYDVTGSLCENNDKFAIDRMLPKIDMGDILVIHDTGAHGFAMGYNY 377

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       +   DG+ K IR   + +DY+  L
Sbjct: 378 NGKLKSAEVLLCEDGSTKLIRRAETPDDYFATL 410


>gi|113954614|ref|YP_730241.1| diaminopimelate decarboxylase [Synechococcus sp. CC9311]
 gi|113881965|gb|ABI46923.1| diaminopimelate decarboxylase [Synechococcus sp. CC9311]
          Length = 453

 Score =  195 bits (496), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 49/396 (12%), Positives = 111/396 (28%), Gaps = 34/396 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP Y++D+  +  +        K         + A K  ++  +   +     G  + S
Sbjct: 46  GTPLYVLDEVTIRASAQEYREALKRHYPGDSLAVYASKAHSSLALTGLVASEGLGLDAVS 105

Query: 60  LYEVMLGHEK-FGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             E++   +     E    +       E+    S+   ++ +    L+   +   +    
Sbjct: 106 AGELLTALDGGMPPERMVLHGNNKSVEELALAYSHGVMVVADNQHDLDCLAELVPQGGGP 165

Query: 118 IGLRIN--PSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCE 168
           + L +   P +              S+ G                    V GL  H   +
Sbjct: 166 VRLMLRFTPGIECHTHEYIRTGHLDSKFGFDPDQLQPVLTALAGCAWARVEGLHAHIGSQ 225

Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK- 224
                    +   +             +  +++GGG+     +           +   + 
Sbjct: 226 IFELDPHRDLAAVMADALKLARELGHPVRDLNVGGGLGIRYVESDDPPSIDAWVKVVAEA 285

Query: 225 ----------YSVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDY 272
                        ++  EPG ++V ++     TV    +   I+  V VD  +  +    
Sbjct: 286 VTLACRERGLELPRLMCEPGRSLVASSGVTVYTVGARKVVPGIRTYVSVDGGMSDNPRPI 345

Query: 273 LLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
                      +        T  + G+ C +GD+  +       + G+ +       YN+
Sbjct: 346 TYQSLYTACLADRPLAQADETITLAGKHCESGDVLLKDLSFPSCRSGEVLVVLATGAYNL 405

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +  + +N I  P   + N        R     D   
Sbjct: 406 SMSSNYNRIPRPAAVLVNQGEAELIQRREQPEDLLR 441


>gi|224541272|ref|ZP_03681811.1| hypothetical protein CATMIT_00432 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525821|gb|EEF94926.1| hypothetical protein CATMIT_00432 [Catenibacterium mitsuokai DSM
           15897]
          Length = 433

 Score =  195 bits (496), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 64/399 (16%), Positives = 124/399 (31%), Gaps = 38/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++ +  + + ++        K      L A K F+   ++   N+Y  G    S 
Sbjct: 30  GTPLYVMSEGHIRHQMNELKTKFMDKYEKALPLFASKSFSCLAIYKLANEYGIGIDCVSA 89

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKK 117
            E+ +     F  +   ++   K         + D    + +   ++   +  A KL KK
Sbjct: 90  GEISIALRAGFDPDKIYFHGNNKLPSEIEYALSHDVTHFVVDNFYEIENCEKIAGKLGKK 149

Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNN 166
           +   LRI P +              ++ G            +  +ES+     G+  H  
Sbjct: 150 VKATLRIVPGIKAGGHNYIMTGHKDTKFGFSSHYGIYLKAIQQILESDNIEYEGIHCHIG 209

Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            +              +K + + +  F      I+ GGG              + +    
Sbjct: 210 SQVFDLFAYVNAMLQFMKFVNEIYNTFGVVTSKINAGGGYGIAYTKQDEPLDFESITSEI 269

Query: 223 EKYSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            K     Y           +EPG  +V N      TV  I E       V     +  ++
Sbjct: 270 MKVIYNEYDSHGWERPAVMIEPGRYVVGNAGITLYTVGCIKEIPDVRTYVSIDGGMSDNI 329

Query: 270 PDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFE-KPVKIGDRISFEDVA 324
              L   +   I  N        T  V G+ C + D+  +       +  GD  +     
Sbjct: 330 RTPLYDAKYDGIVANKAGETKTKTVTVVGKICESADMITKDLPVTANIMPGDIFAVFSTG 389

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
            YN +  + +N +  P +       +   +R  +++D  
Sbjct: 390 AYNYSMSSNYNQLPKPAVVFTYEGESRVVVRRQTFDDLI 428


>gi|327462927|gb|EGF09248.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK1]
          Length = 416

 Score =  195 bits (496), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 57/392 (14%), Positives = 119/392 (30%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   +S  
Sbjct: 19  PTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGCGVDCASYV 78

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++  +  F G+   ++       E         TI  +    +   K+ A        
Sbjct: 79  ELLMSQKLGFAGQDIMFSSNNTPAEEFQFARDLGATINLDAYEDVAFLKEAAGIPKIISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169
                 V      + D     ++ G      I++         E   ++  L  +    +
Sbjct: 139 RYNPGGVFELGTSIMDNP-EEAKFGMTKDQLIQAFKELNELGAEKFGIHALLASNTVSND 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227
                   + +   +       ++++I+L GG+    +    ++    + +         
Sbjct: 198 YYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPDGEENDIAVIGQGVRLAYEAI 257

Query: 228 ---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                    +IY E G  ++     L T V    +  +  + VD+S    +   +     
Sbjct: 258 LTPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKQTYRTYLGVDASAVNLLRPAMYGSYH 317

Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                +          V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HITNMDRPEGETEIVDVVGSLCENNDKFAINRPLPVSQIGDTLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                +  +   DG ++ IR      DY+  L
Sbjct: 378 AKLRSSEILLEQDGNVRMIRRAEKPEDYFATL 409


>gi|324991301|gb|EGC23234.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK353]
 gi|325687122|gb|EGD29145.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK72]
          Length = 416

 Score =  195 bits (496), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 56/392 (14%), Positives = 118/392 (30%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   +S  
Sbjct: 19  PTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGCGVDCASYV 78

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++  +  F G+   ++       E         TI  +    +   K+ A        
Sbjct: 79  ELIMSQKLGFAGQDIMFSSNNTPAEEFQFARDLGATINLDAYEDVAFLKEAAGIPKIISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMF----HNNCEN 169
                 V      + D     ++ G      I++  +         G+      +     
Sbjct: 139 RYNPGGVFELGTSIMDNP-EAAKFGMTKDQLIQAFKELKELGAEKFGIHALLASNTVSNG 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227
                   + +   +       ++++I+L GG+    +    ++    + +   +     
Sbjct: 198 YYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPEGEENDIAVIGQGVRQAYEAI 257

Query: 228 ---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                    +IY E G  ++     L T V    +  +  + VD+S    +   +     
Sbjct: 258 LTPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKQTYRTYLGVDASAVNLLRPAMYGSYH 317

Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                +          V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HITNMDRSESETEIVDVVGSLCENNDKFAINRPLPVSQIGDTLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                +  +   DG ++ IR      DY+  L
Sbjct: 378 AKLRSSEILLEQDGNVRMIRRAEKPEDYFATL 409


>gi|167751738|ref|ZP_02423865.1| hypothetical protein EUBSIR_02747 [Eubacterium siraeum DSM 15702]
 gi|167655546|gb|EDR99675.1| hypothetical protein EUBSIR_02747 [Eubacterium siraeum DSM 15702]
          Length = 423

 Score =  195 bits (496), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 55/393 (13%), Positives = 113/393 (28%), Gaps = 30/393 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           I TP+++ D++ +             N G +   A+K      + + L +   G   SS 
Sbjct: 19  IPTPFHIYDEKGIRETARKLYDAFSWNKGFREYFAVKATPNPYLMEILKEEGCGFDCSSY 78

Query: 61  YEVMLGHEKFGG--ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-K 117
            E+ML  +      +    + A  D +          I  +  + ++             
Sbjct: 79  TELMLSDKVGAKQHDIMFSSNATPDEDFKLAYKLGAIINLDDFTHIDVLDKLTGIPETIC 138

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKS 171
                      S+          ++ G   +  IE+            G+         +
Sbjct: 139 CRYNPGGEFKTSEKGNVMDTPKDAKYGMTHEQIIEAYKILKEKGAKHFGMHAFLASNTLT 198

Query: 172 FLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
              +      + +   +       Q+ +I+L GG+    K     +  + + E   K   
Sbjct: 199 NEYYPVLAGILFRTAVEIKEKTGVQLSFINLSGGVGVPYKPDQPANDIKVIGEGVRKAYE 258

Query: 228 QI-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ 276
           +I           + E G  ++     L    +      K  + +D+     +   +   
Sbjct: 259 EILVPAGMGDVAIFTELGRYMLAPNGALVAKAIREKHIYKEYIGLDACAANLMRPAIYGA 318

Query: 277 ESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                          +   + G  C   D F        + IGD I   D   +  +   
Sbjct: 319 YHHITVMGKENQPCDHKYDITGGLCENCDKFAVDRMLPKIDIGDIIYIHDTGAHGFSMGY 378

Query: 333 WFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
            +NG       +   DG+ K IR   +  DY+ 
Sbjct: 379 NYNGKLRSAEVLLKEDGSFKLIRRAETPKDYFA 411


>gi|332184642|gb|AEE26896.1| Diaminopimelate decarboxylase [Francisella cf. novicida 3523]
          Length = 394

 Score =  195 bits (496), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 62/373 (16%), Positives = 120/373 (32%), Gaps = 32/373 (8%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           TP Y+ D + L +   +A           ++  A+K      + D   +Y  G    S  
Sbjct: 23  TPCYIYDSRLLEDTFASAKKALDKNFKNAEIHYAIKANHHPKIVDIAKKYGMGIDCVSGG 82

Query: 62  EVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKA--QKLHK 116
           E+    E+    +   +    K      +  + D       ++ ++      A  +    
Sbjct: 83  EIRRAFEQNVDPQHIVFAGVGKADWEIELAIDNDIFAFNCESLEEIEVISKIASSKNKQV 142

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCE 168
            I LR+NP++           +   + G    D +             N+ GL +H   +
Sbjct: 143 NICLRVNPNIDAQTHHYISTGQFDDKFGIAFIDVLNWLKNDFQNFDNINIIGLHYHVGSQ 202

Query: 169 NKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLK 219
             ++  F           K        IE I+ GGG+                D+  R +
Sbjct: 203 ILNYQVFQSLAITTNEHIKLLKQNDIDIEHINFGGGLGIDYQNPQQNPIVDFDDYFARFR 262

Query: 220 EFSEKYSV-QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQE 277
           EF E     +++ E G ++V  +  L + VL        +  I+D+ +   +    LYQ 
Sbjct: 263 EFFEYCDDVKLHFELGRSLVGQSGVLLSQVLFNKVTQDTHFAIIDAGMTELIRPA-LYQA 321

Query: 278 SATIY-----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
              I               + G  C + D+F +++    +K GD ++      Y     +
Sbjct: 322 QHKIEALVDESVDEKQHYHIVGPICESSDVFAKYYQLPKIKRGDLLAIYSAGAYGKVLAS 381

Query: 333 WFNGINMPTIAVK 345
            +N          
Sbjct: 382 EYNLRPTVQEYFI 394


>gi|118464128|ref|YP_880747.1| diaminopimelate decarboxylase [Mycobacterium avium 104]
 gi|118165415|gb|ABK66312.1| diaminopimelate decarboxylase [Mycobacterium avium 104]
          Length = 472

 Score =  195 bits (496), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 50/406 (12%), Positives = 114/406 (28%), Gaps = 45/406 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +++D+    +            G  +  A K F    +   +++        +  E
Sbjct: 64  GTPLFVVDEDDFRSRCREIASAFGG-GNNVHYAAKAFLCSEVARWIDEEGLSLDVCTGGE 122

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + +     F  E   ++   K       AV +    ++ ++++++ +    A        
Sbjct: 123 LAVALHADFPPERITFHGNNKSVAELTAAVKAGVGHVVLDSMTEIERLDAIAADAGIVQD 182

Query: 120 LRIN--PSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168
           + +     V               + G                ++E   + GL  H   +
Sbjct: 183 VFVRLTVGVEAHTHEFISTAHEDQKFGLSVASGSALAAVGRVFDTEHLRLVGLHSHIGSQ 242

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F      ++  +      F  +    I  + LGGG+  +            L  
Sbjct: 243 IFDVAGFELAARRVIGLLHDAVEQFGVEKTAQIATVDLGGGLGISYLAADDPPPMGELAG 302

Query: 221 FSEKYSVQ-----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS----- 264
                              + +EPG AI    T     V  + +   +            
Sbjct: 303 KLSAIVQHESAAVGLPTPRLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDG 362

Query: 265 -VEAHVP----DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRI 318
            +  ++     D        +   +     A + G+ C +GDI     +    ++ GD I
Sbjct: 363 GMSDNIRTALYDAQYDARLVSRVSDAPAELARIVGKHCESGDIVVRDTWVPGDLRPGDLI 422

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
                  Y  +  + +N +  P +           +R  + +D  +
Sbjct: 423 GVAATGAYCYSLSSRYNMVCRPAVVAVRDGRARLVLRRETVDDLLS 468


>gi|300773320|ref|ZP_07083189.1| diaminopimelate decarboxylase [Sphingobacterium spiritivorum ATCC
           33861]
 gi|300759491|gb|EFK56318.1| diaminopimelate decarboxylase [Sphingobacterium spiritivorum ATCC
           33861]
          Length = 386

 Score =  195 bits (496), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 68/361 (18%), Positives = 115/361 (31%), Gaps = 26/361 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+Y  D   L   LD      +  G  +  ALK      +   +     G    S  E
Sbjct: 14  ETPFYYYDMSLLERTLDACSAAAEKRGFHVHYALKANFNDRILQLIQAKGFGADCVSGNE 73

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKA--QKLHKK 117
           V    E  F  +   +    K  +        +       ++ ++      A        
Sbjct: 74  VKKSIETGFKADKITFAGVGKSDKEIRYALAHEIFAFNVESIEEMEVINALAGETGQIAN 133

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCEN- 169
           + LRINP+V              ++ G    +         ES+  N+ GL FH   +  
Sbjct: 134 VSLRINPNVDAQTHHYITTGLDENKFGIPNSELEKSAAILRESKHLNLVGLHFHIGSQIV 193

Query: 170 --KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEF 221
               F      +   +  F    T I+ +++GGG+               + +      F
Sbjct: 194 DLNVFKSLCVKVNEWKNWFEERGTTIKVLNVGGGLGVDYKDPDGNPVTDFEAYFDIFDRF 253

Query: 222 SEKYSVQ-IYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESA 279
            E+ S Q ++ E G A+V    +L + VL       KN +I+D+ +   +   L      
Sbjct: 254 LERNSHQEVHFELGRALVAQCGSLLSRVLYTKSGIKKNFLILDAGMTELMRPALYQAYHK 313

Query: 280 TIYPNTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                          V G  C + D FG+       K GD I+      Y     + +N 
Sbjct: 314 IERVGESDQEEINYDVVGPICESSDCFGKEVPLPVSKRGDLIAIRTAGAYGEVMSSHYNL 373

Query: 337 I 337
            
Sbjct: 374 R 374


>gi|76801473|ref|YP_326481.1| diaminopimelate decarboxylase [Natronomonas pharaonis DSM 2160]
 gi|76557338|emb|CAI48914.1| diaminopimelate decarboxylase [Natronomonas pharaonis DSM 2160]
          Length = 410

 Score =  195 bits (496), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 62/383 (16%), Positives = 119/383 (31%), Gaps = 26/383 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D  ++  N              ++ A K      +  TL         ++  E
Sbjct: 24  GTPLYVMDHDRIRANYARFSEAFDF--AHVMYAAKANTGRAVVRTLYDAGADIECAAAGE 81

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLNKFKDKAQKLH 115
           +    E     E   Y              +        TI       L++ +  A+   
Sbjct: 82  LYRAIEAGVAPEDLQYTAVNPPAGDLDYAVDLWEDTPELTITAGAEMTLDRLE--ARGFD 139

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEK-----CKDKIESEIKNVNGLMFHNNCENK 170
            ++ LR+NP +              ++ G          +   E  ++ GL  H      
Sbjct: 140 GRLALRVNPGIGTGHHEKV-ATGKDAKFGLPYEEVEAVAEAARERFDLVGLHAHVGSGVL 198

Query: 171 SFLCFSAMLKNIEK-EFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKY 225
           S              +    +  +E++ LGGG         +   ++   + ++  +   
Sbjct: 199 SGDLDDHERALQRVADLAERVGDLEFVDLGGGFGVPYRPDEEPLDIEAAAEMVRRVTADL 258

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATIYPN 284
              + LEPG  +V +   L T V  I E  +  V+ VD+ + + +   +           
Sbjct: 259 DATVALEPGRYLVADAGALVTRVNTIKETPETRVVGVDAGLTSMIRPAMFDSYHHIRNVT 318

Query: 285 TG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
            G   P  + V G  C + D+F         +  D ++  +V  Y IN  + F+    P 
Sbjct: 319 GGDREPVESSVGGPLCTSADVFCTDRPIPRPEADDLLAIGNVGAYGINLASQFHSQPRPG 378

Query: 342 IAVKNVDGTIKAIREFSYNDYYN 364
                 D      R  ++ D   
Sbjct: 379 EVAIEGDNERVTRRRETFEDLTR 401


>gi|327462018|gb|EGF08347.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK1057]
          Length = 416

 Score =  195 bits (496), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 54/392 (13%), Positives = 119/392 (30%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   +S  
Sbjct: 19  PTPFHLYDEKGVRERARALHKAFSWNPGFKEYFAVKATPNPAILKILKEEGCGVDCASYV 78

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++  +  F G+   ++       +         TI  +    +   K+ A        
Sbjct: 79  ELLMSQKLGFAGQDIMFSSNNTPAEDFQFARDLGATINLDAYEDVAFLKEAAGIPKVISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--NVNGLMFHNN--------CEN 169
                 V      + D     ++ G      I++  +  ++    F  +          +
Sbjct: 139 RYNPGGVFELGTSIMDNP-EEAKFGMTKDQLIQAFKELKDLGAEKFGIHALLASNTVSND 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227
                   + +   +       ++++I+L GG+    +     +    + +   +     
Sbjct: 198 YYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPEGEGNDIAVIGQGVRQAYEAI 257

Query: 228 ---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                    +IY E G  ++     L T V    +  +  + VD+S    +   +     
Sbjct: 258 LTPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKQTYRTYLGVDASAVNLLRPAMYGSYH 317

Query: 279 ATIYPNTGPYTAMVC---GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                +       +    G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HITNMDRSESETEIVDVIGNLCENNDKFAINRPLPVSQIGDTLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                +  +   DG ++ IR      DY+  L
Sbjct: 378 AKLRSSEILLEQDGNVRMIRRAEKPEDYFATL 409


>gi|313127023|ref|YP_004037293.1| diaminopimelate decarboxylase [Halogeometricum borinquense DSM
           11551]
 gi|312293388|gb|ADQ67848.1| diaminopimelate decarboxylase [Halogeometricum borinquense DSM
           11551]
          Length = 441

 Score =  195 bits (496), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 54/387 (13%), Positives = 113/387 (29%), Gaps = 33/387 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ID  ++  N             ++  A+K      + +T+ +       +S  E
Sbjct: 56  GTPLYVIDTDRVQENCARLQEAFSAE--EVRYAVKAHTGRAVLETVREAGLAAECASAGE 113

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLH 115
           V       + G    Y            + +         +        ++ +++     
Sbjct: 114 VERALNAGYEGSEIQYTAVNPPARDLDHVVDRWRDHPELTVTVGAADTADRLRER--GFD 171

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-----SEIKNVNGLMFHNNCEN- 169
            ++ +R NP V              ++ G    D  E     ++  ++ GL  H      
Sbjct: 172 GRLCIRANPGVGAGHHEKV-RTGANAKFGVPYDDVPELAESIADDFDLVGLHAHAGSGIS 230

Query: 170 -----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKE 220
                        M +            +E++ +GGG             +       +E
Sbjct: 231 GDDLSNHRELVRRMGELTRNVESRVG-SLEFVDVGGGFGVPYRADEPPLDLDSVADATRE 289

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESA 279
                S  + +EPG  +V +   L T V  + E     +V VD+ +   +   +      
Sbjct: 290 ALGDVSGTLAVEPGRYVVADAGVLLTRVNTVKEAPDATVVGVDAGMTTLLRPAMYDAYHE 349

Query: 280 TIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
               +        +A V G  C + D+  E       + G+ ++  +   Y     + +N
Sbjct: 350 IRNVSAADDVEAISATVAGPICESADVMCENRLLAYPRRGNLLAVGNAGAYGYEMASTYN 409

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDY 362
               P     +        R  +  D 
Sbjct: 410 SRPRPAEVALSGGAARLVRRRETLTDL 436


>gi|224824693|ref|ZP_03697800.1| diaminopimelate decarboxylase [Lutiella nitroferrum 2002]
 gi|224603186|gb|EEG09362.1| diaminopimelate decarboxylase [Lutiella nitroferrum 2002]
          Length = 413

 Score =  195 bits (496), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 60/401 (14%), Positives = 116/401 (28%), Gaps = 47/401 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +L D   +   +             +  A K  +   +   + +      + SL E
Sbjct: 17  GTPVWLYDAAVIRERVAQLR-AFDV----IRFAQKACSNIHILRLMREQGVVVDAVSLGE 71

Query: 63  VMLGHE------KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLH 115
           +                         D    A +      +   ++  L +    +    
Sbjct: 72  IERALAAGFSGRGDEPSGIVLTADLLDQATLARVVEEQIPVNAGSIDMLRQLGTAS--PG 129

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN 169
            ++ LRINP   +      +     S+ G   +        I      + GL  H     
Sbjct: 130 HRVWLRINPGFGHGHSNKTNTGGENSKHGIWHEQLPDALQVIREHGLTLVGLHMHIGSGV 189

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKE 220
                       +E   G     +E IS GGG+               Y       R + 
Sbjct: 190 DYGHLQQVCGAMVELVAG-MGHDLEAISAGGGLSIPYRDGEARIDTAHYFGLWDAARKEI 248

Query: 221 FSE-KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES 278
            +   + V++ +EPG  +V  + TL   V  +     ++ V+VD+     +   +     
Sbjct: 249 EARLGHPVRLEIEPGRFLVAESGTLLAEVRAVKDMGSRHFVLVDAGFNDLMRPSMYGSYH 308

Query: 279 ATIYPNTGPY--------TAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDV 323
                  G            +V G  C +GD+F +            P ++GD + F D 
Sbjct: 309 GISLVAQGRPQPAGDALLPTVVAGPLCESGDVFTQEDGGVVVTRDLPPCQVGDYLLFHDT 368

Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             Y  +  + +N   +    + + D      R  +  +   
Sbjct: 369 GAYGASMSSNYNSRPLLPEVLIDGDAVRLIRRRQTMAELLA 409


>gi|86607495|ref|YP_476258.1| diaminopimelate decarboxylase [Synechococcus sp. JA-3-3Ab]
 gi|86556037|gb|ABD00995.1| diaminopimelate decarboxylase [Synechococcus sp. JA-3-3Ab]
          Length = 458

 Score =  195 bits (495), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 57/401 (14%), Positives = 115/401 (28%), Gaps = 39/401 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN---AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P Y++D+  L +               G ++L A K +    +     Q   G   +S
Sbjct: 48  GSPLYILDEWTLRHACRLYRDTWARCYPGGSQVLYATKAWNCLAICALALQEGLGLDVAS 107

Query: 60  LYEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             E+    +    G E + +  A    E+   L    T++ +++ +L +    A      
Sbjct: 108 GGELYTAIQAGARGEELYLHGNAKSAEELAMALEVGCTLVADSLYELQQLAALATPARPA 167

Query: 118 IGL-RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCEN 169
             L R+NP +           +  S+ G       E              GL  H   + 
Sbjct: 168 RLLVRVNPGIDVHTHEYIRTGQTDSKFGIGQWQLPEVFDFLAAHPQLQCVGLHAHIGSQI 227

Query: 170 KSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226
                   +   + + +         ++ +++GGG+     +           E      
Sbjct: 228 FDLQGHRDLAGVLAQVWRQGLEKGLPLQELNVGGGLGIRYVESDDPPSIPEWVEAVATAV 287

Query: 227 VQIY-----------LEPGEAIVTNTTTLNTTVLDISENIKN--------LVIVDSSVEA 267
            Q +            EPG ++V        T+        +         V +D  +  
Sbjct: 288 QQSFTAAGIPLPKVLCEPGRSVVGPAAVTAYTLGGKKWIPPSEDLPEGRLYVTIDGGMSD 347

Query: 268 HVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323
           +              A            V G+ C +GD+  +         G+ +     
Sbjct: 348 NPRPITYGARYTALLANRPEAEATQRVTVAGKHCESGDVLLKDVLLPNPAPGEVLVVLTS 407

Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             YN +  + +N    P   + N       +R  +Y D   
Sbjct: 408 GAYNYSMASNYNRFPRPAAVLVNQGKAQLILRRETYADLIR 448


>gi|320335247|ref|YP_004171958.1| diaminopimelate decarboxylase [Deinococcus maricopensis DSM 21211]
 gi|319756536|gb|ADV68293.1| diaminopimelate decarboxylase [Deinococcus maricopensis DSM 21211]
          Length = 410

 Score =  195 bits (495), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 56/370 (15%), Positives = 119/370 (32%), Gaps = 22/370 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D  +L   +            ++  A+K  +   +   L     G    SL E
Sbjct: 48  GTPLYVYDAAELDAAVGRVRAAFG--HARVSYAMKANSNLTVLRRLQARGIGFECVSLGE 105

Query: 63  VMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           +    E    G +      A    E     +   T I +   ++            +  +
Sbjct: 106 LHRAREVGARGDDVLVNGPAKSAEEYTLGAALGATFIVDREEEVALL-----PPRSRALV 160

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCK------DKIESEIKNVNGLMFHNNCENKSFLC 174
           R+NP++  S           S+ G +          + +   +  GL  H     +    
Sbjct: 161 RVNPALDVSTHDHLATGAAISKFGVRLDVAADVLAALRAAGHDARGLHVHIGSAIRDAAD 220

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
           F      +          +E + +GGG         +     R +E +  +  Q+++EPG
Sbjct: 221 FERAFARLADLAPLTGP-LEVLDVGGGWSLDA---DLHGIAARAREAASAFGAQVWVEPG 276

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP--YTAMV 292
             +V     L T V+ +    ++  ++D+ +   +   L   +       +G    T  +
Sbjct: 277 RYLVAGAGALLTRVVGLKRTGRSFALIDAGMTELLRPMLYGAQHPVQALWSGADVQTYDL 336

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352
            G +C +GD+           +G  I+  +   Y  +  + +   + P   + + +    
Sbjct: 337 AGPACESGDLLARDVRLPEPHVGAVIAVGEAGAYGASMSSTYLTRSRPMEVLWDGE-WSV 395

Query: 353 AIREFSYNDY 362
             R  +  D 
Sbjct: 396 IRRRETPQDL 405


>gi|118619175|ref|YP_907507.1| diaminopimelate decarboxylase LysA [Mycobacterium ulcerans Agy99]
 gi|118571285|gb|ABL06036.1| diaminopimelate decarboxylase LysA [Mycobacterium ulcerans Agy99]
          Length = 472

 Score =  195 bits (495), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 55/406 (13%), Positives = 119/406 (29%), Gaps = 45/406 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ID+    +            G  +  A K F    +   +N+       S+  E
Sbjct: 64  GTPLFVIDEDDFRSRCQEIAAAFGG-GHNVNYAAKAFLCSEIARWVNEEGLSIDVSTGGE 122

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + +     F  E    +   K       AV +    I+ +++ ++ +    A +      
Sbjct: 123 LAVALHANFPPERITLHGNNKSVAELTTAVKAGVGHIVLDSMIEIERLDAIAGEAGIVQD 182

Query: 120 LRIN--PSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + +     V               + G            +    ++   + GL  H   +
Sbjct: 183 VFVRLTVGVEAHTHEFISTAHEDQKFGLSISSGAAMAAVRRVFATDHLRLVGLHSHIGSQ 242

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQ--------IEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F      +       + +        +  + LGGG+  +            L +
Sbjct: 243 IFDVDGFELAAHRVIGLLREVVAEFGSEKTAQLAMVDLGGGLGISYLSSDDPPPVGELAD 302

Query: 221 FSEKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDS 263
                             ++ +EPG AI    T     V  + +        +  V VD 
Sbjct: 303 KLGAIVSNESAAVGLPAPRLVVEPGRAIAGPGTITLYEVGTVKDVDVSATANRRYVSVDG 362

Query: 264 SVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318
            +  ++   L   +      +   +     A V G+ C +GDI     +    ++ GD +
Sbjct: 363 GMSDNIRTALYDAQYDVRLVSRVSDAPAMLARVVGKHCESGDIIVRDTWVPDDLQPGDLV 422

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +      Y  +  + +N I  P +           +R  + +D  +
Sbjct: 423 AVAATGAYCYSLSSRYNMIGRPAVVAVRAGKARLVLRRETVDDLLS 468


>gi|21224744|ref|NP_630523.1| diaminopimelate decarboxylase [Streptomyces coelicolor A3(2)]
 gi|8134396|sp|Q9ZBH5|DCDA_STRCO RecName: Full=Diaminopimelate decarboxylase; Short=DAP
           decarboxylase
 gi|4158184|emb|CAA22747.1| diaminopimelate decarboxylase [Streptomyces coelicolor A3(2)]
          Length = 440

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 54/399 (13%), Positives = 114/399 (28%), Gaps = 45/399 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +L D   +   +D            +  A K  +   +   + +      + S  E
Sbjct: 32  GTPLWLYDAATIRAQIDRLRRFDV-----IRYAQKACSNLHILRLMREEGVHVDAVSEGE 86

Query: 63  VMLGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
           +              E   +     +      +      +   +   L++    A     
Sbjct: 87  IERALAAGYRVGGDDEPIVFTADLLNRSTLRRVVELGIPVNAGSPQMLDQVGRAA--PGH 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170
            + +RINP   +      +     S+ G   +        ++    ++ GL  H      
Sbjct: 145 PVWIRINPGFGHGHSRKTNTGGEHSKHGIWHEHLEESLALVDRHGLDLVGLHMHIGSGVD 204

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE------- 223
            +    ++ + + K+       I  IS GGG+         +    R  E  +       
Sbjct: 205 -YGHLESVCETMVKQVRMAGRDIRAISAGGGLSVPYTPGDPEIDTDRYFELWDAARRELV 263

Query: 224 ---KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279
               + V++ +EPG  +V     L   V        N  + VD+     +   +      
Sbjct: 264 SELGHPVRLEIEPGRFLVAGAGVLAAEVRAQKPVGSNYFVLVDAGFNDLMRPAMYGSNHR 323

Query: 280 TIY-------PNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAG 325
                       +     ++ G  C +GD+F        E        +GD + F D   
Sbjct: 324 VSVLDADGAPRASDARDTVLAGPLCESGDVFTQVEGGDVEPVPVPRTDVGDLVVFHDTGA 383

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  + +N   +    + +   T    R  +  +   
Sbjct: 384 YGASMSSTYNSRPLIPEVLVDGAETRLIRRRQTVAELLA 422


>gi|41408567|ref|NP_961403.1| LysA_2 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41396925|gb|AAS04786.1| LysA_2 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 472

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 51/406 (12%), Positives = 114/406 (28%), Gaps = 45/406 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +++D+    +            G  +  A K F    +   +++        +  E
Sbjct: 64  GTPLFVVDEDDFRSRCREIASAFGG-GNNVHYAAKAFLCSEVARWIDEEGLSLDVCTGGE 122

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + +     F  E   ++   K       AV +    ++ ++++++ +    A        
Sbjct: 123 LAVALHADFPPERITFHGNNKSVAELTAAVKAGVGHVVLDSMTEIERLDAIAADAGIVQD 182

Query: 120 LRIN--PSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168
           + +     V               + G                ++E   + GL  H   +
Sbjct: 183 VFVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAALAAVGRVFDTEHLRLVGLHSHIGSQ 242

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F      ++  +      F  +    I  + LGGG+  +            L  
Sbjct: 243 IFDVAGFELAARRVIGLLHDAVEQFGVEKTAQIATVDLGGGLGISYLAADDPPPMGELAG 302

Query: 221 FSEKYSVQ-----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS----- 264
                              + +EPG AI    T     V  + +   +            
Sbjct: 303 KLSAIVQHESAAVGLPTPRLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDG 362

Query: 265 -VEAHVP----DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRI 318
            +  ++     D        +   +     A V G+ C +GDI     +    ++ GD I
Sbjct: 363 GMSDNIRTALYDAQYDARLVSRVSDAPAELARVVGKHCESGDIVVRDTWVPGDLRPGDLI 422

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
                  Y  +  + +N +  P +           +R  + +D  +
Sbjct: 423 GVAATGAYCYSLSSRYNMVCRPAVVAVRDGRARLVLRRETVDDLLS 468


>gi|82545140|ref|YP_409087.1| diaminopimelate decarboxylase [Shigella boydii Sb227]
 gi|187733218|ref|YP_001881421.1| diaminopimelate decarboxylase [Shigella boydii CDC 3083-94]
 gi|81246551|gb|ABB67259.1| diaminopimelate decarboxylase [Shigella boydii Sb227]
 gi|187430210|gb|ACD09484.1| diaminopimelate decarboxylase [Shigella boydii CDC 3083-94]
 gi|320185573|gb|EFW60338.1| Diaminopimelate decarboxylase [Shigella flexneri CDC 796-83]
 gi|332092188|gb|EGI97266.1| diaminopimelate decarboxylase [Shigella boydii 3594-74]
          Length = 420

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 57/393 (14%), Positives = 117/393 (29%), Gaps = 46/393 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D      +S     +   +V  L++    +     ++
Sbjct: 82  RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G          D I+     + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                    + +    F   ++ IS GGG+             + Y       R +    
Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     +      +V G  C +GD+F        E      VK GD +   D   Y
Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
             +  + +N  ++    + +        R  + 
Sbjct: 379 GASMSSNYNSRSLLPEVLFDNGQARLIRRRQTI 411


>gi|312864719|ref|ZP_07724950.1| putative diaminopimelate decarboxylase [Streptococcus downei F0415]
 gi|311099846|gb|EFQ58059.1| putative diaminopimelate decarboxylase [Streptococcus downei F0415]
          Length = 414

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 61/390 (15%), Positives = 119/390 (30%), Gaps = 27/390 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   ++  
Sbjct: 19  PTPFHLYDEKGIRETARAVNQAFSWNPGFKEYFAVKATPNPSILKILQEEGCGVDCATDV 78

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EVM+  +    +    +   +  E          I  +    +   ++ A      + LR
Sbjct: 79  EVMMAKKLDFKDISFTSNDTRAEEFVYAREVGAMINLDAYEHIAFLEEVAGLPET-VSLR 137

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVNGLMFH------NNCENKS 171
            NP   +S       +   S+ G      ++         V     H          N  
Sbjct: 138 YNPGGVFSLGTDIMDHPEESKFGMTKAQLLQGYKDLKAKGVKQFGLHAFLASNTVTNNYY 197

Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI-- 229
                 + +   +       ++ +I+L GGI         ++    + +   +   QI  
Sbjct: 198 PTLAGQLFELALEIREETGVELNFINLSGGIGIDYSPADKQNDIALIGQGVHEKFDQILV 257

Query: 230 ---------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280
                    + E G  ++     L T VL + +  ++ V VD+S    +   +       
Sbjct: 258 PNGLGQIKIFTELGRFMLAPHGHLVTKVLHLKDTYRHYVGVDASAVNLLRPAMYDAYHHI 317

Query: 281 IYPNTGPYTAMVC---GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
              +       V    G  C   D F +       ++GD +   D   +  +    +N  
Sbjct: 318 TNISNPDGPIQVVDVTGSLCENNDKFAKNRELSEPRVGDTLVIHDTGAHGFSMGYQYNAR 377

Query: 338 NMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                 +   DG+ K IR      DY+  L
Sbjct: 378 LRSAEVLLQEDGSAKLIRRAEKPGDYFATL 407


>gi|284048965|ref|YP_003399304.1| Orn/DAP/Arg decarboxylase 2 [Acidaminococcus fermentans DSM 20731]
 gi|283953186|gb|ADB47989.1| Orn/DAP/Arg decarboxylase 2 [Acidaminococcus fermentans DSM 20731]
          Length = 420

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 60/393 (15%), Positives = 116/393 (29%), Gaps = 30/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+++ D++ + N + +       N G K   A+K     G+   + +   GT  SS  
Sbjct: 20  PTPFHIYDEKGIRNTVRSINKAFAWNKGFKEYFAVKATPLPGILKIMKEEGCGTDCSSYP 79

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E++L     F G    ++       ++         I  +  + ++  +  A        
Sbjct: 80  ELLLSDVCGFKGHDIMFSSNDTPVKDMQEAYKLGAIINLDDFTMIDFLEQVAAIPETICC 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES----EIKNVNGLMFH------NNCEN 169
                 V      + D     S+ G       E+    + K V     H           
Sbjct: 140 RFNPGGVFALGNDIMDNPG-DSKYGMTRDQLREAFKILKAKGVKHFGIHAFLASNTVTNG 198

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
                   + +            +++I+L GG+    +     +    + E   K   ++
Sbjct: 199 YYPELARQLFQLAVDMKKETGVAVDFINLSGGVGIPYRPEQTPNDIAAIGEGVRKVYEEV 258

Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                      + E G  +      L T VL      K  V VD+     +   +     
Sbjct: 259 LTPAGMGNVALFTEMGRFVTGPYGGLVTKVLHFKHIYKEYVGVDACAANLMRPAMYGAYH 318

Query: 279 ATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +T  V G  C   D F        +  GD +   D   +       +
Sbjct: 319 HITVLGKENEPCDHTYDVTGGLCENNDKFAIDRKLPKIDKGDYLFIHDTGAHGSAMGYNY 378

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           N        +   DG+++ +R   +  DY+  L
Sbjct: 379 NAKLWCAELLLKEDGSVELLRRAETEKDYFATL 411


>gi|320176405|gb|EFW51459.1| Diaminopimelate decarboxylase [Shigella dysenteriae CDC 74-1112]
          Length = 420

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 57/393 (14%), Positives = 117/393 (29%), Gaps = 46/393 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D      +S     +   +V  L++    +     ++
Sbjct: 82  RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGPVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G          D I+     + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                    + +    F   ++ IS GGG+             + Y       R +    
Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     +      +V G  C +GD+F        E      VK GD +   D   Y
Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
             +  + +N  ++    + +        R  + 
Sbjct: 379 GASMSSNYNSRSLLPEVLFDNGQARLIRRRQTI 411


>gi|16332032|ref|NP_442760.1| diaminopimelate decarboxylase [Synechocystis sp. PCC 6803]
 gi|2499348|sp|Q55484|DCDA_SYNY3 RecName: Full=Diaminopimelate decarboxylase; Short=DAP
           decarboxylase
 gi|1001344|dbj|BAA10831.1| diaminopimelate decarboxylase [Synechocystis sp. PCC 6803]
          Length = 469

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 58/404 (14%), Positives = 122/404 (30%), Gaps = 42/404 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P Y++D+  L           +       +++ A K ++   +     Q   G    S
Sbjct: 56  GSPLYILDETTLRQAAQQYRQSFQAHYPGSSQVIYASKAWSCLAVVAIAAQEGLGFDVVS 115

Query: 60  LYEV--------MLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109
             E+         LG    +   + + +       E+   ++   TII +   +L     
Sbjct: 116 GGELFTTVSALKQLGWDEAEIAEKIYFHGNNKSVQELQEAIAINCTIIVDNWLELETLTK 175

Query: 110 KAQK--LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNG 160
            A       KI LR+ P +              S+ G              +    +  G
Sbjct: 176 LAADSGAPVKIMLRLTPGIECHTHEYIKTGHLDSKFGFDPNQLEAVFTYIAQQPSLHCLG 235

Query: 161 LMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQR 217
           L  H   +         + + + + F     +   +  +++GGG+     +       + 
Sbjct: 236 LHAHIGSQIFERQPHKDLGEVLVQWFTKGLTYGLPLTELNIGGGLGICYTESDDPPSIEE 295

Query: 218 L-----------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSS 264
                        +       ++  EPG ++V +       V    +  NI+  + VD  
Sbjct: 296 WAQVAAISVAKACDRQNIPYPKLIAEPGRSLVGSACVTAYRVGGRKVVPNIRTYISVDGG 355

Query: 265 VEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
           +  +              A    +    T  V G+ C +GDI  +       + GD +  
Sbjct: 356 MSDNPRPITYQSVYRVALANRMNDEITETVTVAGKHCESGDILVKDVALPAAEPGDIMVV 415

Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
                YN +  + +N +  P   + N       ++  +Y D   
Sbjct: 416 AATGAYNHSMASNYNRLGRPAAVLVNQGQANLILQRETYTDLLR 459


>gi|256380150|ref|YP_003103810.1| diaminopimelate decarboxylase [Actinosynnema mirum DSM 43827]
 gi|255924453|gb|ACU39964.1| diaminopimelate decarboxylase [Actinosynnema mirum DSM 43827]
          Length = 474

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 56/408 (13%), Positives = 122/408 (29%), Gaps = 47/408 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +++D+    +          +    +  A K F +  +   + +        S  E
Sbjct: 65  GTPLFVMDEADFRSRCAEHAAAFGDP-SLVHYASKAFLSVAVARWVAEEGLSIDVCSGGE 123

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTII--FNTVSQLNKFKDKAQKL--HKK 117
           + +    +F  E  A +   K     A   +    +   ++  ++ +    A++    ++
Sbjct: 124 LAIALRAEFPPERIALHGNNKSVAELAAAVDAGVGVVVLDSFQEIARLDQVARERGRVQQ 183

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G         E  +  +++E  ++ GL  H   +
Sbjct: 184 VMIRVTVGVEAHTHEFIATAHEDQKFGFSLSSGDAAEAARRVVKAEGLSLVGLHSHIGSQ 243

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQ--------IEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F    + +         +        +  + LGGG+               L  
Sbjct: 244 IFDASGFEVAARRVVSLLAELRVEHGPALLDELTTLDLGGGLGIAYTADDDPPPPAVLAA 303

Query: 221 FSEKYSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI------KNLVIVDS 263
                  Q             +EPG AIV   T     V  I +        +  V VD 
Sbjct: 304 QLRDIVAQECGRAGLPVPKLAVEPGRAIVGPGTVTLYEVGTIKDVQLDAGATRRYVSVDG 363

Query: 264 SVEAHVPDYLLYQESATIYPNTGPYT------AMVCGRSCLAGDIFGEFHFEK-PVKIGD 316
            +  ++   L          +             V G+ C AGD+     +    +  GD
Sbjct: 364 GMSDNIRTALYDAVYDCRLVSRAAEEGSEAVLCRVVGKHCEAGDVVVRDCWLPADLAPGD 423

Query: 317 RISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            ++      Y  +  + +N +  P +A  +   +   +R  +  D + 
Sbjct: 424 LVAVAATGAYCYSMASGYNRLPRPALAAVDGGRSRLLLRRETEEDLFR 471


>gi|319441083|ref|ZP_07990239.1| hypothetical protein CvarD4_04872 [Corynebacterium variabile DSM
           44702]
          Length = 476

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 57/408 (13%), Positives = 117/408 (28%), Gaps = 47/408 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +++D+                 G  +  A K F +  +   +         +S  E
Sbjct: 59  GTPVFVMDEADFRGRCRRLAAAFGG-GEHVHYASKAFLSVTVARWVADEGLALDVASQGE 117

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F  E    +     +D    AV +  + I+ ++V ++ +    A  L   + 
Sbjct: 118 LEIALTAGFPAERITVHGNNKSEDFLAVAVRAGVELIVIDSVEEIGRLAKVASGLGVTQD 177

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168
           + +R+ P V          +    + G               +++    + GL  H   +
Sbjct: 178 VLVRVKPGVHVDTHEFIATSHEDQKFGFSLASGSAERACLAVVDAAGMRLRGLHCHVGSQ 237

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQ------IEWISLGGGIHFTDKDYPVKDFCQRL 218
                 F      +L    +       +      +  + LGGG          +   + +
Sbjct: 238 VFEADGFGLAADRLLGLWARLIDELGEESDEATALNTLDLGGGYGIAYTPDQEELDVETV 297

Query: 219 KEFSEKYSVQIYLE-----------PGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--- 264
                +   Q  +E           PG AI   +T     V  + +   +   V      
Sbjct: 298 ASDLLRRVRQTAVERGLDAPVLNVEPGRAIAGPSTVTLYAVGTVKDVHTSDDTVRRYISV 357

Query: 265 ---VEAHVPDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKP-VKIGD 316
              +  ++   L   E      N           V G  C +GDI          +  GD
Sbjct: 358 DGGMSDNIRPALYQAEYDCRLANRHAIGTLVPTRVVGSHCESGDILINDALMPDDIAAGD 417

Query: 317 RISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            ++      Y     + +N +  P + +     +   IR  +  D   
Sbjct: 418 ILAVPATGAYCYMMASRYNMLTRPPVVIVGDGQSRVMIRRETVADVLA 465


>gi|82778214|ref|YP_404563.1| diaminopimelate decarboxylase [Shigella dysenteriae Sd197]
 gi|309785148|ref|ZP_07679779.1| diaminopimelate decarboxylase [Shigella dysenteriae 1617]
 gi|81242362|gb|ABB63072.1| diaminopimelate decarboxylase [Shigella dysenteriae Sd197]
 gi|308926268|gb|EFP71744.1| diaminopimelate decarboxylase [Shigella dysenteriae 1617]
          Length = 420

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 57/393 (14%), Positives = 116/393 (29%), Gaps = 46/393 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D      +S     +   +V  L++    +     ++
Sbjct: 82  RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G          D I+     + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                    + +    F   ++ IS GGG+             + Y       R +    
Sbjct: 200 HLEQVCGAMVRQVI-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAARQQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     +      +V G  C +GD+F        E      VK GD +   D   Y
Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALLEVKAGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
             +  + +N   +    + +        R  + 
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411


>gi|119487027|ref|ZP_01620899.1| diaminopimelate decarboxylase [Lyngbya sp. PCC 8106]
 gi|119455956|gb|EAW37090.1| diaminopimelate decarboxylase [Lyngbya sp. PCC 8106]
          Length = 461

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 51/398 (12%), Positives = 116/398 (29%), Gaps = 36/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P Y++D+Q L                    +L A K ++   +   +     G    S
Sbjct: 53  GSPLYIVDEQTLRAACRQYREALARYYPGESLVLYASKAWSCLAICALVASEGLGLDVVS 112

Query: 60  LYEVMLGH-EKFGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             E+          +T   +       EI   +    TI+ +    L      +++   +
Sbjct: 113 GGELYTAITANVNPQTLYLHGNNKSRDEILLAIETGCTIVIDNWLDLQMLAQLSEQRSTQ 172

Query: 118 IGLRIN----PSVSYSKFILADPNRPFSRLGEKCKDKI-----ESEIKNVNGLMFHNNCE 168
             +R+     P +              S+ G             ++   ++ +  H +  
Sbjct: 173 APIRVMVRLTPGIECHTHEYIRTGHLDSKFGFDPNQFDAVFSAIAQQPGLSCVGLHAHIG 232

Query: 169 NKSFLCFSA-----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL----- 218
           ++ F          ++     +   +   I  +++GGG+     +       +       
Sbjct: 233 SQIFELQPHGDLASVIVEAITKASQYGLNISEVNVGGGLGICYTEADDPPSIETWAKTVC 292

Query: 219 ------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVP 270
                  +       ++  EPG +IV        TV    +       +     +  +  
Sbjct: 293 QAMVKACQQQNIELPKLLCEPGRSIVGPACITAYTVGSQKQIPGIRTYIAVDGGMSDNPR 352

Query: 271 DYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
                     +  N        T  V G+ C +GDI  +     P + GD ++      Y
Sbjct: 353 PITYQSVYRVVLVNRMSAPLSQTVTVAGKHCESGDIVIKDAQLPPCEPGDILAVLATGAY 412

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           N +  + +N ++ P   + +       +   +Y D   
Sbjct: 413 NYSMASNYNRLSRPAAVLVSEGECNLILERETYQDLIR 450


>gi|306832019|ref|ZP_07465174.1| diaminopimelate decarboxylase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304425945|gb|EFM29062.1| diaminopimelate decarboxylase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 438

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 59/388 (15%), Positives = 120/388 (30%), Gaps = 27/388 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   ++  
Sbjct: 43  PTPFHLYDEKGIREKARALNKAFAWNKGFKEYFAVKATPTPAILKILQEENCGVDCATEV 102

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E+++ H+    +    +      E         TI  +    +   K+ A      + LR
Sbjct: 103 ELLMSHKLGFTDIMFSSNDTPAREFRYAKEIGATINLDAYEHIAFLKEVAGLPET-VSLR 161

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVN--GLMFHNNCEN----KS 171
            NP   ++       N   S+ G      I+     + + V   G+              
Sbjct: 162 YNPGGVFALGTDIMDNPEESKFGMTKAQLIQGFKDLKAEGVKNFGIHSFLASNTVTNDYY 221

Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ--- 228
                 + +   +        + +I+L GG+    +     +    + +   +   +   
Sbjct: 222 PELARQLFELAVEVKEKTGVAVSFINLSGGVGVNYRPEQEPNDIAVIGKGVHRVFDEVLI 281

Query: 229 --------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280
                   I+ E G  ++     L T V    +  +  + VD+S    +   +       
Sbjct: 282 PAGLGDVKIFTELGRFMLAPHGLLVTKVRHRKQTYRTYIGVDASAVNLMRPAMYDAYHHI 341

Query: 281 IY---PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                PN       V G  C   D F +       ++GD +   D   +  +    +NG 
Sbjct: 342 TNVSNPNGKLEVVDVVGSLCENNDKFAKRRELPEARVGDTLVIHDTGAHGFSMGYQYNGR 401

Query: 338 NMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
                 +   DG+ + IR   +  DY+ 
Sbjct: 402 LRSAEILYQEDGSARLIRRAETPEDYFA 429


>gi|254525643|ref|ZP_05137695.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT
           9202]
 gi|221537067|gb|EEE39520.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT
           9202]
          Length = 457

 Score =  194 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 56/397 (14%), Positives = 114/397 (28%), Gaps = 35/397 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P Y++D+  L  +        +         + A K  ++  M + ++    G  + S
Sbjct: 49  DSPLYILDESTLRKSCRAYKKALEKYFPGESLPIYASKANSSIFMSNLVSSEGLGLDAVS 108

Query: 60  LYEVMLGHEK-FGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             E++   +     E   ++     D EID  + N   II +    L + +  +  L+  
Sbjct: 109 EGELLTALKGGVPNEKIVFHGNNKSDKEIDFAIRNNIKIIVDNDYDLKRLEKISNSLNHD 168

Query: 118 IGLRIN--PSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCE 168
           + + I   P +              S+ G   +            +  N+ G+  H   +
Sbjct: 169 LEIMIRFTPGIECHTHEYIKTGSFDSKFGFGIEYLNNLFASISETKHLNLKGIHAHIGSQ 228

Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQ--------- 216
                    + + + K       F   I  +++GGG+                       
Sbjct: 229 IFELDPHKDLGEIMVKVILDAKKFGHNIRELNVGGGLGIKYTQNDDPPSIDEWVKTISTS 288

Query: 217 RLKEFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDY 272
            ++   +       L  EPG +IV+        +    E         VD  +  +    
Sbjct: 289 VVEACKKHNLDLPILMCEPGRSIVSTAGITIYKIGAFKEIPGIRTYLSVDGGMSDNPRPI 348

Query: 273 LLYQESATIY-----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
                 +                 + G+ C +GD+          K GD I       YN
Sbjct: 349 TYQSNYSACLVKNPFNINSKNKYTIAGKHCESGDVLFRDIELANCKTGDLICVFGTGAYN 408

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            +  + +N I  P   +          +     D   
Sbjct: 409 NSMSSNYNRIPRPAAILVCDGEAEIIQKRERPFDLLR 445


>gi|253582415|ref|ZP_04859638.1| diaminopimelate decarboxylase [Fusobacterium varium ATCC 27725]
 gi|251835954|gb|EES64492.1| diaminopimelate decarboxylase [Fusobacterium varium ATCC 27725]
          Length = 434

 Score =  194 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 67/400 (16%), Positives = 134/400 (33%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++D+  +  N+       K++     ++ A K F +  +   + +Y     + S 
Sbjct: 29  GTPLYIMDQSLIEENIIKYKNNFKSSKFDTSIVYASKAFLSKAICQLVEKYDIEIDAVSG 88

Query: 61  YEVMLGH-EKFG-GETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+           + H +     D E++  L     +II +   ++ +     ++ +KK
Sbjct: 89  GELYTIKTSGLPMKKVHMHGNNKTDEELEMCLDYEIGSIIIDNEEEIERLSRICKEKNKK 148

Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
           I   +RIN  +          ++  S+ GE   D          ++ E     G   H  
Sbjct: 149 IKVMMRINIGIDAHTHEYIKTSKHSSKFGESIFDERITEIVGKIVKDENMEFLGFHCHIG 208

Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            +            +M+K  +K        I  I+LGGG      +       ++  +  
Sbjct: 209 SQIFDTKAFHEGIESMVKETKKISEVLGIYIPEINLGGGFGVYYTEKDTAIDVEQFMKSM 268

Query: 223 EKYSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
            ++  +             +EPG +IV N  +   TV            + +D  +  ++
Sbjct: 269 IEHLERSLEAEKMKLKKVSIEPGRSIVANAGSTLYTVGGTKTTYGGVKYIFIDGGMTDNI 328

Query: 270 PDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   E   +  N           + G+ C +GD+  +       + GD I       
Sbjct: 329 RPALYQAEYEAVVANKINEPAEDVVTIAGKCCESGDLIIKNGKLAKAETGDLILVATTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  N +N    P +       +  +I+  S  D   N
Sbjct: 389 YGYSMSNNYNKAPKPAVVFVKDGKSALSIKRESLEDLVRN 428


>gi|331082967|ref|ZP_08332087.1| hypothetical protein HMPREF0992_01011 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330399962|gb|EGG79620.1| hypothetical protein HMPREF0992_01011 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 427

 Score =  194 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 62/391 (15%), Positives = 125/391 (31%), Gaps = 29/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +  N          N G K   A+K  A   + + L +Y  G   SS  
Sbjct: 20  PTPFHLYDEKGIRENAKAMKEAFSWNKGFKEYFAVKANANPFLINLLREYGFGCDCSSYT 79

Query: 62  EVMLGHE-KFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+ML       GE   ++       +         TI  + ++ ++  +    K+ ++I 
Sbjct: 80  ELMLSEAIGCVGEDIMFSSNDTPTEDFQYAAQLGATINLDDITHIDFLEKAIGKIPERIS 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCEN---- 169
            R NP   +        N   ++ G   +   ++            G+            
Sbjct: 140 CRFNPGGIFEVCNGIMDNPGDAKYGMTEEQIFDAFRILKEKGSKEFGIHAFLASNTVTNE 199

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
              +    + +   +       +I +I+L GG+          +  + + E   +   + 
Sbjct: 200 YYPMLAKKLFELAVRLEKETGAKICFINLSGGVGIPYTPDQEPNDIRAIGEGVHRVYDEV 259

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     IY E G  ++     L TT +      K+ + +D+     +   +     
Sbjct: 260 LVPAGMGDVAIYSELGRFMMGPYGCLVTTAIHEKHTHKDYIGLDACAVNLMRPAMYGAYH 319

Query: 279 ATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        ++ GD +   D   +       +
Sbjct: 320 HITVMGKENLTLDHKYDVTGSLCENNDKFAVDRMLPEIQKGDILVIHDTGAHGFAMGYNY 379

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   DG+++ IR     +DY+ 
Sbjct: 380 NGKLKSAELLLKEDGSVQLIRRAEKPSDYFA 410


>gi|237729800|ref|ZP_04560281.1| diaminopimelate decarboxylase [Citrobacter sp. 30_2]
 gi|226908406|gb|EEH94324.1| diaminopimelate decarboxylase [Citrobacter sp. 30_2]
          Length = 418

 Score =  194 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 56/396 (14%), Positives = 114/396 (28%), Gaps = 44/396 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRGQIAKLSQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF---GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGL 120
                    G +   +     D    A +      +   +V  L +    +     ++ L
Sbjct: 82  RALAAGFVPGKDEIVFTADMIDEATLARVHELSIPVNAGSVDMLEQLGQVS--PGHRVWL 139

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174
           R+NP   +      +     S+ G    D       I+     + G+  H          
Sbjct: 140 RVNPGFGHGHSQKTNTGGENSKHGIWYSDLPAALEVIQRYKLKLVGIHMHIGSGVDYAHL 199

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE-K 224
                  + +    F   +E IS GGG+               Y       R +      
Sbjct: 200 EQVCGAMVRQVV-EFGQDLEAISAGGGLSIPYHEGEEAIDTDHYFGLWNAAREQIAKHLG 258

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA---- 279
           + + + +EPG  +V     L   V  +     ++ V++D+     +   +          
Sbjct: 259 HPIALEIEPGRFLVAEAGVLVAQVRSVKEMGSRHFVLIDAGFNDLMRPAMYGSYHHISAL 318

Query: 280 ----TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNI 328
                   +T     +V G  C +GD+F        E      V  GD +   D   Y  
Sbjct: 319 SGDGRSLEHTPQRETVVAGPLCESGDVFTQQEGGNVETRLLPAVVPGDYLVLHDTGAYGA 378

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +  + +N   +    + +        R  + ++   
Sbjct: 379 SMSSNYNSRPLLPEVLFDNGVARLIRRRQTIDELLA 414


>gi|283786539|ref|YP_003366404.1| diaminopimelate decarboxylase [Citrobacter rodentium ICC168]
 gi|282949993|emb|CBG89621.1| diaminopimelate decarboxylase [Citrobacter rodentium ICC168]
          Length = 420

 Score =  194 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 57/398 (14%), Positives = 121/398 (30%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D    + +S     +   +V  L +  + +     ++
Sbjct: 82  RALAAGYNPQTHPDDIVFTADVIDNATLSRVSELQIPVNAGSVDMLAQLGEVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G    D  ++          + G+  H       +
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLPQALAVMQQYQLTLAGIHMHIGSGVD-Y 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223
                +   + ++   F   ++ IS GGG+    +          Y       R +    
Sbjct: 199 GHLEQVCGAMVRQVVEFGQDLQAISAGGGLSIPYREGEEAVDTRHYFGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATI 281
             + V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVKLEIEPGRFLVAESGVLVTQVRSVKQMGNRHFVLVDAGFNDLMRPAMYGSYHHIT 318

Query: 282 --------YPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     N      +V G  C +GD+F        E      VK GD +   D   Y
Sbjct: 319 ALAADGRSLENAPQVETVVAGPLCESGDVFTQQEGGNVETRTLPAVKPGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    + +        R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 416


>gi|260589538|ref|ZP_05855451.1| protein TabA [Blautia hansenii DSM 20583]
 gi|260540106|gb|EEX20675.1| protein TabA [Blautia hansenii DSM 20583]
          Length = 427

 Score =  194 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 62/391 (15%), Positives = 125/391 (31%), Gaps = 29/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +  N          N G K   A+K  A   + + L +Y  G   SS  
Sbjct: 20  PTPFHLYDEKGIRENAKAMKEAFSWNKGFKEYFAVKANANPFLINLLREYGFGCDCSSYT 79

Query: 62  EVMLGHE-KFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+ML       GE   ++       +         TI  + ++ ++  +    K+ ++I 
Sbjct: 80  ELMLSEAIGCVGEDIMFSSNDTPTEDFQYAAQLGATINLDDITHIDFLEKAIGKIPERIS 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCEN---- 169
            R NP   +        N   ++ G   +   ++            G+            
Sbjct: 140 CRFNPGGIFEVCNGIMDNPGDAKYGMTEEQIFDAFRILKEKGSKEFGIHAFLASNTVTNE 199

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
              +    + +   +       +I +I+L GG+          +  + + E   +   + 
Sbjct: 200 YYPMLAKKLFELAVRLEKETGAKICFINLSGGVGIPYTPDQEPNDIRAIGEGVHRVYDEV 259

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     IY E G  ++     L TT +      K+ + +D+     +   +     
Sbjct: 260 LVPAGMGDVAIYSELGRFMMGPYGCLVTTAIHEKHTHKDYIGLDACAVNLMRPAMYGAYH 319

Query: 279 ATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        ++ GD +   D   +       +
Sbjct: 320 HITVMGKENLPLDHKYDVTGSLCENNDKFAVDRMLPEIQKGDILVIHDTGAHGFAMGYNY 379

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   DG+++ IR     +DY+ 
Sbjct: 380 NGKLKSAELLLKEDGSVQLIRRAEKPSDYFA 410


>gi|255658989|ref|ZP_05404398.1| diaminopimelate decarboxylase [Mitsuokella multacida DSM 20544]
 gi|260848948|gb|EEX68955.1| diaminopimelate decarboxylase [Mitsuokella multacida DSM 20544]
          Length = 419

 Score =  194 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 61/393 (15%), Positives = 120/393 (30%), Gaps = 31/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+++ D+  +  N+             +   A+K      +   L++   GT +SSL 
Sbjct: 21  PTPFHIYDEHAIRENIRKLQKAFAWAPRFREQFAVKALPNPRILQVLHEEGAGTDNSSLA 80

Query: 62  EVML--GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E++L       G E    +      E    +     I  + +S L+  +  A        
Sbjct: 81  ELVLSEVSGYKGSEILLTSNDTPADEFQKAIELGAIINLDDISHLDYLEKNAGLPEIIC- 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVNGLMFHNNCENK----- 170
                     +          ++ G       E+        V     H    +      
Sbjct: 140 -FRYNPGDLIEGNDIIGKPTEAKYGLTRDQLFEAYKMAKEKGVKRFGLHTMVASNERRTE 198

Query: 171 -SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
                   M +   +        +E++++GGGI    +        + + E   K   ++
Sbjct: 199 AFVFTAKLMFELAVELKNRLGIHVEFVNIGGGIGIPYRPEEEPVDLEAVGEGIHKLYDEM 258

Query: 230 YL-----------EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
            +           E G AI      L +T +   +  K+ + +DS +   +   +     
Sbjct: 259 MVPEGLGDVAMMTESGRAITGPAGWLVSTAIHEKKTYKDYIGLDSCMANLMRPAMYGAYH 318

Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                            V G  C   D F        + IGDR+   D   +       +
Sbjct: 319 HITIAGKENEPCDHVYDVTGSLCENNDKFAIDRKLPKIDIGDRVIIHDTGAHGSAMGFNY 378

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       + + DG+++ IR   + +DY+  L
Sbjct: 379 NGKLWCAELLLHEDGSVELIRRAETLDDYFATL 411


>gi|167627334|ref|YP_001677834.1| diaminopimelate decarboxylase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167597335|gb|ABZ87333.1| diaminopimelate decarboxylase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 394

 Score =  194 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 58/372 (15%), Positives = 116/372 (31%), Gaps = 30/372 (8%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           TP Y+ D   L +   +A           ++  A+K      + +   +Y  G    S  
Sbjct: 23  TPCYIYDSTLLDDTFASAKKALDKNFKNAEIHYAIKANHHPKIVNIAKKYGMGIDCVSGG 82

Query: 62  EVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK--FKDKA--QKLHK 116
           E+    E+    +   +    K      +  + D   FN+ S          A  +    
Sbjct: 83  EIRRALEQNVDPQNIVFAGVGKADWEIELAIDNDIFAFNSESLEEIEVISQIASSKNKQV 142

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN--------VNGLMFHNNCE 168
            I LR+NP++           +   + G    + +     +        + GL +H   +
Sbjct: 143 NICLRVNPNIDAQTHHYISTGQFDDKFGIAFANILNWLKNDFQNFGNIKIIGLHYHVGSQ 202

Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLK 219
               + F   +       K        IE I+ GGG+                ++  R +
Sbjct: 203 ILNYQVFESLAITTNEHIKLLKQNDIDIEHINFGGGLGIDYQNPHQNPIVDFDNYFARFR 262

Query: 220 EFSEKYSV-QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQE 277
           EF E     +++ E G ++V  +  L + VL        +  I+D+ +   +   L   +
Sbjct: 263 EFFEYCDDVKLHFELGRSLVGQSGVLVSQVLFNKVTQDTHFAIIDAGMTELIRPALYQAQ 322

Query: 278 S----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                             + G  C + D+F +++    +K GD +       Y     + 
Sbjct: 323 HKIEALIDESVNEKQHYHIVGPICESSDVFAKYYQLPKIKRGDLLVIYSAGAYGKVLASE 382

Query: 334 FNGINMPTIAVK 345
           +N          
Sbjct: 383 YNLRPTVQEYFI 394


>gi|22299304|ref|NP_682551.1| diaminopimelate decarboxylase [Thermosynechococcus elongatus BP-1]
 gi|22295487|dbj|BAC09313.1| diaminopimelate decarboxylase [Thermosynechococcus elongatus BP-1]
          Length = 450

 Score =  194 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 58/407 (14%), Positives = 118/407 (28%), Gaps = 42/407 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P Y++D+              + A      +L A K +         +    G   +S
Sbjct: 40  GSPLYILDEFTFRTACRQYQETLQRAYGGESLVLYASKAWNCLATCALAHSEGLGIDVAS 99

Query: 60  LYEVMLGHEKFGGETHAY--NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--- 114
             E+          +H Y         E+   L    TI+ +   +L +     ++    
Sbjct: 100 GGELYTALSAGVPASHIYFHGNNKSPQELLYALEVNCTIVADNWLELERLAAYVEEHDLS 159

Query: 115 -HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV-------NGLMFHNN 166
              ++ LR+ P +              S+ G   +   E              GL  H  
Sbjct: 160 TPPRVMLRLTPGIECHTHEYIRTGHLDSKFGFDPQQFPELLQFAKAHPELDWVGLHAHIG 219

Query: 167 CENKSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDYPVK----DFCQRLK 219
            +         +   +          +  +  +++GGG+     +         + + + 
Sbjct: 220 SQIFEEQPHLDLCDVLVDWLAQARAAMLPMRELNVGGGLGIRYVESDNPPAIAHWIKAIS 279

Query: 220 EFSEKYSVQIYL-------EPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVP 270
               +   Q +L       EPG +IV        TV    +   ++  + VD  +  +  
Sbjct: 280 HQLSQACQQRHLPLPKLICEPGRSIVGPAAVTAYTVGSRKVIPELRTYIAVDGGMSDNPR 339

Query: 271 DYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
                 +     A         T  V G+ C +GDI        P++  D +       Y
Sbjct: 340 PMTYQAQYTALCANRMTTAATETVRVAGKHCESGDILLAHATLPPLQANDILVVASTGAY 399

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN------NLS 367
           N +  + +N +  P   +         ++  +Y D          LS
Sbjct: 400 NYSMASNYNRVPRPAAVIVCDGEANLILQRETYADLVAHDVLPLRLS 446


>gi|291277619|ref|YP_003517391.1| putative carboxynorspermidine decarboxylase, NspC [Helicobacter
           mustelae 12198]
 gi|290964813|emb|CBG40669.1| putative carboxynorspermidine decarboxylase, NspC [Helicobacter
           mustelae 12198]
          Length = 404

 Score =  194 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 126/396 (31%), Positives = 201/396 (50%), Gaps = 34/396 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I +P Y+++++ LL NL+    I+K++G K+LLALK +A    F  ++QY+ GTT+S ++
Sbjct: 9   IPSPCYVLEEELLLGNLEILDSIQKSSGAKILLALKGYALHPSFSLISQYLSGTTASGIH 68

Query: 62  EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLN----------K 106
           E  LG E+FGG     E   ++ AYK  E+  ++     IIFN+ +Q            K
Sbjct: 69  EARLGAEEFGGREKNKEVCVFSPAYKHQEMLDLIEIATHIIFNSFAQWQEFKPLIEQKNK 128

Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLM 162
                 K   ++GLR+NP  S     + +P    SRLG    +  +       + ++GL 
Sbjct: 129 IFRVENKQEIEVGLRLNPLYSEVTPPIYNPCISGSRLGINPSEFQKGVQSYGLEGISGLH 188

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
           FH +CE  S      ++ + E+ FG +I Q+ WI+ GGG H T K Y +      +K+F 
Sbjct: 189 FHTHCEQNSDALARTLV-HFERHFGDYIPQMSWINFGGGHHITRKGYDLALLDGIIKDFR 247

Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
           ++Y+   ++LEPGEA+   +  L   V+D+  N  ++ I+D S  AH+PD L       +
Sbjct: 248 KRYNEVAVFLEPGEAVGWESGFLIGEVVDLIHNGMDIAILDVSATAHMPDCLEMPYRPRV 307

Query: 282 YPNT------------GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
                             Y     G SCLAGD+ G++ F+  ++ GDR+ FED+  Y I 
Sbjct: 308 RVLNRWGIHQDQGEDVAKYRYRFGGPSCLAGDVIGDYSFDVALQRGDRVIFEDMMHYTIV 367

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + N FNGI +P++      G    ++ F Y DY N 
Sbjct: 368 KNNTFNGIPLPSLGKITNQG-FVLLKTFGYLDYKNR 402


>gi|325661240|ref|ZP_08149867.1| hypothetical protein HMPREF0490_00600 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325472747|gb|EGC75958.1| hypothetical protein HMPREF0490_00600 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 423

 Score =  194 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 61/391 (15%), Positives = 119/391 (30%), Gaps = 29/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+++ D++ +  N+         N G K   A+K      +   L +Y  G   SS  
Sbjct: 20  PTPFHIYDERGIRENVRALKEAFSWNKGYKEYFAVKATPNPFLIQILREYGCGCDCSSYT 79

Query: 62  EVML--GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+M+       G +    + A    E          I  +  + ++  +     + + I 
Sbjct: 80  ELMMSEAIGAVGEDIMFSSNATPAEEFVYADKLGGIINLDDFTHIDFLEKAIGHIPETIS 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169
            R NP   +        N   ++ G   +   ++         +   ++  L  +     
Sbjct: 140 CRYNPGGLFQISNDIMDNPGDAKYGMTTEQLFDAFRILKEKGAKHFGIHAFLASNTVTNE 199

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
              +    + +   K        I++I+L GGI    +     +    + E   K   + 
Sbjct: 200 YYPMLAKVLFEVAVKLQKETGVHIKFINLSGGIGIPYRPDQEPNDIHAIGEGVRKVYEEV 259

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     IY E G  ++     L T  +      K  +  D+     +   +     
Sbjct: 260 LVPAGMGDVAIYTELGRFMMGPYGALVTRAIHEKHTHKEYIGCDACAVNLMRPAMYGAYH 319

Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        +  GD +   D   +       +
Sbjct: 320 HITVMGKEDAPCDHKYDVTGSLCENNDKFAIDRMLPKIDTGDLLYIHDTGAHGFAMGYNY 379

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   DG+++ IR   +  DYY 
Sbjct: 380 NGKLKSAELLLKEDGSVQMIRRAETPADYYA 410


>gi|153814493|ref|ZP_01967161.1| hypothetical protein RUMTOR_00707 [Ruminococcus torques ATCC 27756]
 gi|317500535|ref|ZP_07958757.1| diaminopimelate decarboxylase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331089366|ref|ZP_08338266.1| hypothetical protein HMPREF1025_01849 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145847987|gb|EDK24905.1| hypothetical protein RUMTOR_00707 [Ruminococcus torques ATCC 27756]
 gi|316898045|gb|EFV20094.1| diaminopimelate decarboxylase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330405429|gb|EGG84964.1| hypothetical protein HMPREF1025_01849 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 424

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 67/391 (17%), Positives = 125/391 (31%), Gaps = 29/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +  N+         N G K   A+K      + D L +Y  G   SS  
Sbjct: 20  PTPFHLYDEKGIRENVKALKEAFSWNKGYKEYFAVKATPNPFLIDILKEYGCGCDCSSYT 79

Query: 62  EVML--GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+M+    E  G +    +      E          I  + ++ ++  +     + + I 
Sbjct: 80  ELMMSEALEITGEDIMFSSNDTPAEEFIYADKLGAIINLDDITHIDFLEQAIGHVPETIS 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCENKSFL 173
            R NP   +        N   ++ G   +  +E+            GL         +  
Sbjct: 140 CRFNPGGLFKISNDIMDNPGDAKYGMTPEQILEAYKILKSKGAKEFGLHAFLASNTVTND 199

Query: 174 CFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
            +  + K + ++           I++I+L GGI    K     +    + E   K   + 
Sbjct: 200 YYPMLAKVLFEQAVKLSKEAGVHIKFINLSGGIGIPYKPDQEPNDIYAIGEGVRKVYEEV 259

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     IY E G  ++     L T  +      KN + VD+     +   +     
Sbjct: 260 LVPAGMGDVAIYTELGRYMMGPYGCLVTKAIHEKNTYKNYIGVDACAVNLMRPAMYGAYH 319

Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        ++ GD +   D   +       +
Sbjct: 320 HITVLGKEDEPCDHKYDVTGSLCENNDKFAVDRMLPLIERGDYLVIHDTGAHGFAMGYNY 379

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   +G +K IR   +  DY++
Sbjct: 380 NGKLKSAELLLKENGEVKLIRRAETPADYFS 410


>gi|146319362|ref|YP_001199074.1| diaminopimelate decarboxylase [Streptococcus suis 05ZYH33]
 gi|146321567|ref|YP_001201278.1| diaminopimelate decarboxylase [Streptococcus suis 98HAH33]
 gi|253752391|ref|YP_003025532.1| pyridoxal-dependent decarboxylase [Streptococcus suis SC84]
 gi|253754217|ref|YP_003027358.1| pyridoxal-dependent decarboxylase [Streptococcus suis P1/7]
 gi|253756151|ref|YP_003029291.1| pyridoxal-dependent decarboxylase [Streptococcus suis BM407]
 gi|145690168|gb|ABP90674.1| putative diaminopimelate decarboxylase [Streptococcus suis 05ZYH33]
 gi|145692373|gb|ABP92878.1| putative diaminopimelate decarboxylase [Streptococcus suis 98HAH33]
 gi|251816680|emb|CAZ52321.1| pyridoxal-dependent decarboxylase [Streptococcus suis SC84]
 gi|251818615|emb|CAZ56449.1| pyridoxal-dependent decarboxylase [Streptococcus suis BM407]
 gi|251820463|emb|CAR47175.1| pyridoxal-dependent decarboxylase [Streptococcus suis P1/7]
 gi|292558994|gb|ADE31995.1| putative diaminopimelate decarboxylase [Streptococcus suis GZ1]
 gi|319758796|gb|ADV70738.1| putative diaminopimelate decarboxylase [Streptococcus suis JS14]
          Length = 415

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 63/388 (16%), Positives = 119/388 (30%), Gaps = 27/388 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   ++  
Sbjct: 20  PTPFHLYDEKGIREKARALNAAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCATDV 79

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV++  +    +    +   +  E         TI  +    +   K+ A      + LR
Sbjct: 80  EVLMSEKLGFKDIMFTSNDTQAQEFVYARKVGATINLDAYEHIEFLKNVAGIPET-VCLR 138

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN----KS 171
            NP   +S       +   S+ G            ++       G+              
Sbjct: 139 YNPGGVFSLGTDIMDHPEESKFGMTKDQLMKGYKELKELGVKQFGIHAFLASNTVTNDYY 198

Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY------ 225
            +    + +   +        +++I+L GGI    +     +    + E   K       
Sbjct: 199 PVLARQLFELALEIREETGVTLDFINLSGGIGVNYRPEQEPNDIAVIGEGVRKVYEEILT 258

Query: 226 -----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280
                 V+I+ E G  ++     L T VL   E  +  + VD+S    +           
Sbjct: 259 PAGMGHVKIFTELGRFMLAPHGHLITKVLHRKETYRTYIGVDASAANLMRPAFYGAYHHI 318

Query: 281 IYPNTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                         V G  C   D F        V++GD +   D   +  +    +NG 
Sbjct: 319 TNITRPDAPIEVVDVAGSLCENNDKFAVNRELPRVEVGDTLVIHDSGAHGFSMGYNYNGR 378

Query: 338 NMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
              +  +   DGT + IR   +  DY+ 
Sbjct: 379 LRSSEILLQEDGTARMIRRAETPEDYFA 406


>gi|295109827|emb|CBL23780.1| Diaminopimelate decarboxylase [Ruminococcus obeum A2-162]
          Length = 430

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 62/391 (15%), Positives = 119/391 (30%), Gaps = 29/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +  N          N G K   A+K      +   L +Y  G   SS+ 
Sbjct: 20  PTPFHLYDERGIRENAMALKEAFAWNKGFKEFFAVKATPNPYLIQILQEYGCGCDCSSMT 79

Query: 62  EVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+ML        G+    +    + E          I  + ++ +   +     + K I 
Sbjct: 80  ELMLSKAIGCKKGDIMFSSNDTPEAEFRYANEIGGIINLDDITHIEAVEKAVGYIPKTIS 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN---- 169
            R NP   +        N   ++ G            ++++     G+            
Sbjct: 140 CRYNPGGLFKISNDIMDNPGDAKYGMTTDQIFEAFRILKAKGAEEFGIHAFLASNTVTNE 199

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
              +    M +   K        + +I+L GGI    +     +  + + E   K   + 
Sbjct: 200 YYPMLAKIMFELAVKLQKETGAHVGFINLSGGIGIPYRPEQTPNDIRVIGEGVRKVYEEV 259

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     IY E G  ++     L T  +      K  + VD+     +   +     
Sbjct: 260 LVPAGMGDVAIYTELGRFMMGPYGCLVTKAIHEKHTHKEYIGVDACAVNLMRPAMYGAYH 319

Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                            + G  C   D F    +   +++GD +   D   +       +
Sbjct: 320 HITVMGKEDKPCDHLYDITGSLCENNDKFAIDRYLPEIEMGDLLVIHDTGAHGFAMGYNY 379

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   DG+ + IR   +  DY+ 
Sbjct: 380 NGKLKSAEILLREDGSFEMIRRAETPRDYFA 410


>gi|320547384|ref|ZP_08041673.1| diaminopimelate decarboxylase [Streptococcus equinus ATCC 9812]
 gi|320447980|gb|EFW88734.1| diaminopimelate decarboxylase [Streptococcus equinus ATCC 9812]
          Length = 413

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 60/388 (15%), Positives = 117/388 (30%), Gaps = 27/388 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   ++  
Sbjct: 19  PTPFHLYDEKGIREKARALNKAFSWNKGFKEYFAVKATPTPAILKILQEENCGVDCATEV 78

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E+++ H+    +    +      E         TI  +    +   K+ A      + LR
Sbjct: 79  ELLMSHKLGFTDIMFSSNDTPAREFQYAKEIGATINLDAYEHIAFLKEVAGLPET-VSLR 137

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIE------SEIKNVNGLMFHNNCEN----KS 171
            NP   +S       N   S+ G      I+      +E     G+              
Sbjct: 138 YNPGGVFSLGTDIMDNPEESKFGMTKAQLIQGFKDLKAEGVKYFGIHSFLASNTVTNDYY 197

Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ--- 228
                 + +   +        + +I+L GG+    +     +    + E   +   +   
Sbjct: 198 PELARQLFELAVEVKEKTGVSVSFINLSGGVGVNYRPEQKANDIAVIGEGVHRVFDEVLV 257

Query: 229 --------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280
                   I+ E G  ++     L T V    E  +  + VD+S    +   +       
Sbjct: 258 PAGLGNVKIFTELGRFMLAPHGLLVTKVRHRKETYRTYIGVDASAVNLMRPAMYDAYHHI 317

Query: 281 IYPNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                         V G  C   D F +       ++GD +   D   +  +    +NG 
Sbjct: 318 TNMTNPNGKLEVVDVVGSLCENNDKFAKQRELPQARVGDMLVIHDTGAHGFSMGYQYNGR 377

Query: 338 NMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
                 +   DG+ + IR   +  DY+ 
Sbjct: 378 LRSAEILYQEDGSARLIRRAETPEDYFA 405


>gi|33861646|ref|NP_893207.1| diaminopimelate decarboxylase [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
 gi|33634223|emb|CAE19549.1| Diaminopimelate decarboxylase [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
          Length = 457

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 57/397 (14%), Positives = 119/397 (29%), Gaps = 35/397 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P Y++D+  L N+        +         + A K  ++  M + +     G  + S
Sbjct: 49  DSPLYVLDEITLRNSCKAYKKALEKYYPGPSLPIYASKANSSIFMSNLIASEGFGLDAVS 108

Query: 60  LYEVMLGHEK-FGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             E++   +     E   ++     D EI+  + N   +I +    L + ++ +   +  
Sbjct: 109 EGELLTALKGGVPNEKIVFHGNNKSDKEIEFAIKNNIKVIVDNDHDLKRLEEISNSFNHD 168

Query: 118 IGLRIN--PSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCE 168
           I + +   P +              S+ G   +            +   + GL  H   +
Sbjct: 169 IEIMVRFTPGIECHTHEYIRTGSFDSKFGFGIESLGRLFEVISKTKHIKLTGLHAHIGSQ 228

Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQ--------- 216
                  + + K +         F   I+ +++GGG+     +                 
Sbjct: 229 IFELDPHNDLGKIMVDVILQAKDFGHNIKELNVGGGLGIKYTEEDDPPSIDEWIKTVSLS 288

Query: 217 RLKEFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDY 272
            +K   +       L  EPG +IV+        +    E         VD  +  +    
Sbjct: 289 VVKACDKNNLNLPILMCEPGRSIVSTAGVTIYKIGSFKEIPGIRTYLSVDGGMSDNPRPI 348

Query: 273 LLYQES-----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
               +           +       V G+ C +GD+  +       K GD I       YN
Sbjct: 349 TYQSKYSACLVNNPLNSNSKNKYTVAGKHCESGDVLFKELELGDCKTGDLICVFGTGAYN 408

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            +  + +N I  P   +          +  S +D   
Sbjct: 409 NSMSSNYNRIPKPAAILVCNGEAEIIQKRESPHDLLK 445


>gi|251788371|ref|YP_003003092.1| diaminopimelate decarboxylase [Dickeya zeae Ech1591]
 gi|247536992|gb|ACT05613.1| diaminopimelate decarboxylase [Dickeya zeae Ech1591]
          Length = 420

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 53/398 (13%), Positives = 118/398 (29%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +  D   ++  +             +  A K  +   +   + Q      S SL E+ 
Sbjct: 27  PLWAYDADTIIERIGQLRQFD-----TIRFAQKACSNLHILALMRQQGVKVDSVSLGEIE 81

Query: 65  LGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                            +     D      +   +  +   ++  L++  +++      +
Sbjct: 82  RALAAGFEPGTDAHEIVFTADVLDDATLQRVHELNIPVNAGSIDMLHQLGERS--PGHPV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172
            LRINP   +      +     S+ G    D  ++          + G+  H       +
Sbjct: 140 WLRINPGFGHGHSQKTNTGGENSKHGIWYADLPQALEALSRYRLKLIGIHMHIGSGVD-Y 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----------KDYPVKDFCQRLKEFS 222
                +   + ++       +E IS GGG+                Y + +  +      
Sbjct: 199 RHLEQVCDAMVQQVLAVGQDLEAISAGGGLSIPYRHGGERIDTQHYYGLWNRAREQIAGH 258

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATI 281
             + V + +EPG  +V  +  L   V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVTLEIEPGRFLVAESGVLVAQVRVVKDMGSRHFVLVDAGFNDLMRPAMYGSYHHIT 318

Query: 282 Y--------PNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                      +  +  +V G  C +GD+F        E       ++GD + F D   Y
Sbjct: 319 LLPGDGRDLSQSALHDTVVAGPLCESGDVFTQQAGGGVETLALPAAQVGDYLVFHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    +          R  + +D   
Sbjct: 379 GASMSSNYNSRPLIAEVLFEQGQPRLIRRRQTLDDLLA 416


>gi|264680016|ref|YP_003279925.1| diaminopimelate decarboxylase [Comamonas testosteroni CNB-2]
 gi|262210531|gb|ACY34629.1| diaminopimelate decarboxylase [Comamonas testosteroni CNB-2]
          Length = 415

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 55/395 (13%), Positives = 109/395 (27%), Gaps = 45/395 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   +   +             +  A K  +   +   + +      + S  E
Sbjct: 18  GTPLWVYDAATIRERIAQLK-AFD----TVRFAQKACSNIHILKLMREQGVKVDAVSRGE 72

Query: 63  VMLGHE-----KFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-QKLH 115
           V+          FG      +     D    A +   +  +      ++     A     
Sbjct: 73  VLRALAAGFTPGFGEPADIVFTADVMDEATLATVV--EHQVPVNAGSIDMLHQLAAVSKG 130

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCEN 169
             + LRINP   +      +     S+ G          D I++    + GL  H     
Sbjct: 131 HHVWLRINPGFGHGHSNKTNTGGEHSKHGIWHSELEVALDAIKAGGLVLAGLHMHIGSGV 190

Query: 170 KSFLCFSAMLKNIE--KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE---- 223
                       ++  +        +  IS GGG+    K               +    
Sbjct: 191 DYGHLQEVCGAMVKLVERTKAAGVDLHAISAGGGLSIPYKQGDATIDTNHYHGLWDAARK 250

Query: 224 ------KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQ 276
                  +S+ + LEPG  +V  +  L  TV        N  + VD+     +   +   
Sbjct: 251 QAEGIVGHSLGLELEPGRFLVAESGVLLGTVRATKNAGSNHFVLVDTGFNELMRPSMYGS 310

Query: 277 ESATIYPNT-----GPYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324
                             ++V G  C +GD+F +               +GD +   D  
Sbjct: 311 YHGMEVLRRDGQSLPAQDSVVAGPLCESGDVFTQGDGGVVLPRSLAGASVGDLLVIHDTG 370

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
            Y  +  + +N   +    + +   +    R  + 
Sbjct: 371 AYGSSMSSNYNTRPLAAEVLVDGAQSQLIRRRQTV 405


>gi|295700590|ref|YP_003608483.1| diaminopimelate decarboxylase [Burkholderia sp. CCGE1002]
 gi|295439803|gb|ADG18972.1| diaminopimelate decarboxylase [Burkholderia sp. CCGE1002]
          Length = 422

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 56/403 (13%), Positives = 109/403 (27%), Gaps = 48/403 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   +   +             +  A K  +   +   +        + SL E
Sbjct: 21  GTPLWVYDADTIRQRIAQLRSFD-----TIRYAHKACSNVHILKLMRDEGVMVDAVSLGE 75

Query: 63  VMLGHEKF---------GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQ 112
           +                  E   +     D    A +      +   ++  L++    A 
Sbjct: 76  LARSFAAGFTAQPASHDAAEGVVFTADVLDHATLATVLEERITVNAGSLDMLDRLGRHAS 135

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNN 166
           +   ++ LRINP   +      +     S+ G    D   +          + GL  H  
Sbjct: 136 E-GHRVWLRINPGFGHGHSSKTNTGGEHSKHGIWRDDLPRALELVRRYRLKLVGLHMHIG 194

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-KDYPVKDFCQRLKEFSE-- 223
                +   + +   +          IE IS GGG+        P  D     + + +  
Sbjct: 195 SGVD-YAHLAKVCDAMVDAVSQLDQDIEAISAGGGLSVPYRDGEPSVDTAHYFRLWDDAR 253

Query: 224 -------KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLY 275
                   + V++ +EPG  +V     L   V  ++        + D+     V      
Sbjct: 254 RRIEAQVGHRVRLEIEPGRFLVAQAGVLIAEVHALNRRPSRQFALLDAGFNDLVRPSFYG 313

Query: 276 QESATIYPNTGPYT-------AMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFE 321
                                  V G  C AGD+F +              ++GD + F 
Sbjct: 314 SHHEISVLRRDGTPSDAPIGSFSVAGPLCEAGDVFTQVEGGVVTSRSMPAPQVGDLLVFH 373

Query: 322 DVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           D   Y  +  + +N   +    +          R     +   
Sbjct: 374 DAGAYGASMSSNYNSRPLAPEVLIERGNARLIRRRQRIEELIA 416


>gi|323141339|ref|ZP_08076232.1| putative diaminopimelate decarboxylase [Phascolarctobacterium sp.
           YIT 12067]
 gi|322414188|gb|EFY05014.1| putative diaminopimelate decarboxylase [Phascolarctobacterium sp.
           YIT 12067]
          Length = 429

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 58/391 (14%), Positives = 110/391 (28%), Gaps = 30/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D+  +             N G K   A+K      +   L +   G   SS  
Sbjct: 21  PTPFHLYDEAGIRRTARLVNKAFSWNKGFKEYFAVKATPNPYLLQILREEGCGADCSSYT 80

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++     F      ++       +          I  + ++ ++  +  A        
Sbjct: 81  ELLMSDAVGFKESEIMFSSNATPAEDFKLARKLNVNINLDDITHIDFLEKVADIPETVCC 140

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFH------NNCEN 169
                        + D     ++ G   +  IE+      K V     H           
Sbjct: 141 RYNPGGHFAIANNIMDNPG-DAKYGMTHEQIIEAYKILKSKGVKNFGIHAFLASNTVTNE 199

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
                   + +   +        I +I+L GGI    K     +    + E   K   ++
Sbjct: 200 YYPELARILFELAVELKEKTGAHISFINLSGGIGIAYKPEQQDNDVLAIGEGVRKVFEEV 259

Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                      + E G  ++     L TT +      K  +  D+     +   +     
Sbjct: 260 LVPAGMGDVKLFTELGRYMLAPNGALVTTAIHQKHIYKEYIGCDACAANLMRPAIYGSYH 319

Query: 279 ATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        + IGD +   D   +  +    +
Sbjct: 320 HISVMGKENAPCDHKYDVTGGLCENNDKFAVDRMLPEINIGDLLFIHDAGAHGFSMGYNY 379

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   DG++K IR   +  DY+ 
Sbjct: 380 NGKLRSAELLLQEDGSVKMIRRAETPADYFA 410


>gi|300868260|ref|ZP_07112890.1| diaminopimelate decarboxylase [Oscillatoria sp. PCC 6506]
 gi|300333742|emb|CBN58074.1| diaminopimelate decarboxylase [Oscillatoria sp. PCC 6506]
          Length = 470

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 55/398 (13%), Positives = 120/398 (30%), Gaps = 37/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P Y++D+  L           K       ++L A K ++   +    +    G    S
Sbjct: 61  GSPIYILDEVTLRTACRQYREALKRYYPGESQVLYASKAWSCMAVCAIASSEGLGIDVVS 120

Query: 60  LYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTV----SQLNKFKDKAQK 113
             E+              ++   K      +       I+ +      + +   +++A +
Sbjct: 121 GGEIFTALQAGVSPNKLYFHGNNKSRSELELAIESGCTIVADNWLELSTLVEILENRATQ 180

Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNN 166
             + + LR  P +              S+ G    D              +  GL  H  
Sbjct: 181 PVRVM-LRFTPGIECHTHEYIRTGHLDSKFGFDPNDLDRVFAFLSKQPSLSCIGLHAHIG 239

Query: 167 CENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRL----- 218
            +         +   I + F    H+   +  +++GGG+  +  +       +       
Sbjct: 240 SQIFELQPHEDLAGVIAEAFVKASHYGLPVGELNVGGGLGISYTEADDPPSIEAWVKVIG 299

Query: 219 ------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVP 270
                  +  E    ++  EPG +++ +      TV    +   ++  + VD  +  +  
Sbjct: 300 ESVAAACQKLEIPLPKLLCEPGRSLIGSACVTAYTVGSKKVIPGMRTYLAVDGGMSDNPR 359

Query: 271 DYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
                     +  N        T  + G+ C +GDI  +       K GD +       Y
Sbjct: 360 PITYQSVYRVVAANQMSAPLTETVTIAGKHCESGDIVIKNAQLPVSKPGDVLVVMATGAY 419

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           N +  + +N +  PT  +         I+  +Y D   
Sbjct: 420 NYSMASNYNRLPRPTAVLVRDGEANVIIQRETYQDLLR 457


>gi|116491950|ref|YP_803685.1| diaminopimelate decarboxylase [Pediococcus pentosaceus ATCC 25745]
 gi|116102100|gb|ABJ67243.1| diaminopimelate decarboxylase [Pediococcus pentosaceus ATCC 25745]
          Length = 430

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 62/400 (15%), Positives = 124/400 (31%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D   + N +       ++ G++  +  A K F+   ++  + Q    +   S 
Sbjct: 27  GTPLQVFDVTMIRNQIQAFQKEFEDRGIRGIVSYASKAFSCKAIYQVVKQEHAHSDVVSG 86

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F   + +++   K       AV     TII +   +L        + + +
Sbjct: 87  GEIATALAAGFPSTSLSFHGNNKSLAELNFAVQKGVGTIILDNFHELELLDQVLNENNTQ 146

Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKCK--DKIESEI-------KNVNGLMFHNN 166
           I   LR+ P VS          +  S+ G        +++          ++ G+  H  
Sbjct: 147 IDVLLRVTPGVSAHTHSYIQTGQTDSKFGFDIDSGQALKAMRLSQNNPRIHLRGIHAHIG 206

Query: 167 CENKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---- 218
            +      F   +K     +      +    + +++GGG              + L    
Sbjct: 207 SQIFEVTGFKLEVKKLVNLLTNWSQKYQFTADILNIGGGFGIKYTHADDPLAPELLLGEI 266

Query: 219 -------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHV 269
                       +    I++EPG +IV        T+    +       V VD  +  ++
Sbjct: 267 LDELQVQYSKLGQPIPTIWIEPGRSIVGPAGFSLYTIGSRKDVPGLSPYVAVDGGMGDNI 326

Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   +   +           T  + G+ C +GDI          K GD +       
Sbjct: 327 RPALYQADYEAVLAENPNQPPIETVRLAGKFCESGDILINHLPLPTTKTGDVLVMLATGA 386

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  + +N    P +           I+  +Y D   N
Sbjct: 387 YGYSMASNYNRNPRPAVVFAENSQAQLVIQRETYADMIQN 426


>gi|157148390|ref|YP_001455709.1| diaminopimelate decarboxylase [Citrobacter koseri ATCC BAA-895]
 gi|157085595|gb|ABV15273.1| hypothetical protein CKO_04214 [Citrobacter koseri ATCC BAA-895]
          Length = 420

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 58/398 (14%), Positives = 118/398 (29%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D    A +S     +   +V  L++    +     ++
Sbjct: 82  RALAAGYDPQNHPDDIVFTADVIDAATLARVSELRIPVNAGSVDMLDQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172
            LRINP   +      +     S+ G    D   +          + G+  H       +
Sbjct: 140 WLRINPGFGHGHSQKTNTGGENSKHGIWHTDLPAALAVMQRHRLQLVGVHMHIGSGVD-Y 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223
                +   + ++   F   +E IS GGG+               Y       R +    
Sbjct: 199 GHLEQVCGAMVRQVIDFGQDLEAISAGGGLSIPYHEGEEAVDTQHYFGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATI 281
             + V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHRVKLEIEPGRFLVAQSGVLVTQVRSVKEMGRRHFVLVDAGFNDLMRPAMYGSYHHIT 318

Query: 282 --------YPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     +      +V G  C +GD+F        E      V  GD +   D   Y
Sbjct: 319 ALAADGRSLEHAPLLDTVVAGPLCESGDVFTQQEGGNVETRALPAVAPGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    + +        R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGKARLIRRRQTIEELLA 416


>gi|329961124|ref|ZP_08299379.1| diaminopimelate decarboxylase [Bacteroides fluxus YIT 12057]
 gi|328532062|gb|EGF58872.1| diaminopimelate decarboxylase [Bacteroides fluxus YIT 12057]
          Length = 386

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 67/365 (18%), Positives = 123/365 (33%), Gaps = 26/365 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTAL-YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           ++TP+Y  D + L + L        K     +  A+K  A   +   + +   G    S 
Sbjct: 13  LRTPFYYYDTKVLRDTLSCIRTEASKYDNYSVHYAVKANANPKVLTIIRENGLGADCVSG 72

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115
            E+       F      +    K      +  + D   FN  +V +L      A  +   
Sbjct: 73  GEIRAAIKAGFPSGKIVFAGVGKADWEINLGLDYDIFCFNVESVPELEVINGLAAAKGKV 132

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-----EIKNVN--GLMFHNNCE 168
             +  RINP+V              ++ G   +D         E+ NV   GL FH   +
Sbjct: 133 ANVAFRINPNVGAHTHANITTGLAENKFGISMQDMDHVIDVAGEMNNVKFIGLHFHIGSQ 192

Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-------DFCQRL 218
                 F+     +  ++ +      +IE I++GGG+         +        F    
Sbjct: 193 ILDMGDFVALCNRVNELQDKLEARRIRIEHINVGGGLGIDYAHPNRQAIPDFKKYFIAYD 252

Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQE 277
           +    +    ++ E G ++V    +L + VL + +       + D+ +   +   L    
Sbjct: 253 EHLKLRSYQTLHFELGRSVVGQCGSLISRVLYVKQGTNKQFAILDAGMTDLIRPALYQAF 312

Query: 278 S--ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                I  +    T  V G  C + D+FG+      VK GD I+      Y     + +N
Sbjct: 313 HKIENITSDAPMQTYDVVGPICESSDVFGKAIDLNGVKRGDLIALRSAGAYGEIMASGYN 372

Query: 336 GINMP 340
              +P
Sbjct: 373 CRELP 377


>gi|66825991|ref|XP_646350.1| group IV decarboxylase [Dictyostelium discoideum AX4]
 gi|60474341|gb|EAL72278.1| group IV decarboxylase [Dictyostelium discoideum AX4]
          Length = 421

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 58/394 (14%), Positives = 112/394 (28%), Gaps = 30/394 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP+++ +  K+  N +  +   K      +   A+K      +   L +   G   SSL
Sbjct: 26  PTPFHIYNGDKIKENGELLMNSFKKYFPNYRNYFAVKATPNPSILKLLKEIGMGVDCSSL 85

Query: 61  YEVMLG-HEKFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E++L     F  E   +     K  E          I  +  +Q+    +    +  ++
Sbjct: 86  AELILSEKVGFKNEEIMFTSNNTKSEEYKKAYELGSIINLDDYTQIEYLYESLGGVMPEL 145

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSF 172
                      K      N   ++ G    D  ++  K         GL           
Sbjct: 146 ISFRYNPGPLKKGNDIIGNPKDAKFGLTSDDLEKAYNKAKELGVKRFGLHCMVASNELDL 205

Query: 173 LCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPV------------KDFCQ 216
             F    + +               E ++LGGGI    +   +              + +
Sbjct: 206 DYFEETARLLFSTISKLTKSCGITFEMVNLGGGIGIPYRPNQIAVDYLKLTEKISNAYKE 265

Query: 217 RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ 276
            + E      + +  E G  I      L T  +      K  + VD+ +   +   +   
Sbjct: 266 LIVEEEGLPKLNVVTECGRVITGPYGVLVTKAIHSKSTYKEYIGVDACMVNLMRPGMYGA 325

Query: 277 ESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                  N        T  V G  C   D F        +  GD +   D   +  +   
Sbjct: 326 YHHITVLNPTDPNSTETYDVVGSLCENNDKFCIDRSLPKIHRGDTLVIHDTGAHGHSMGF 385

Query: 333 WFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366
            +NG       +   +      R  +++D ++ L
Sbjct: 386 NYNGKLRSAEYLLLNNSINCIRRAETFDDLFSTL 419


>gi|298245000|ref|ZP_06968806.1| diaminopimelate decarboxylase [Ktedonobacter racemifer DSM 44963]
 gi|297552481|gb|EFH86346.1| diaminopimelate decarboxylase [Ktedonobacter racemifer DSM 44963]
          Length = 447

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 58/405 (14%), Positives = 125/405 (30%), Gaps = 42/405 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN----AGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
            TP Y+ D+  + +         +     + V++L A K + +  +   + +   G    
Sbjct: 39  GTPLYIFDRATIAHACQRYFQAFERYYQASAVRILYASKAYLSPLVARIIAEQDMGLDIV 98

Query: 59  SLYEVMLG-HEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           S  E+ +     F  E  +++   K       A+      II +  S+L +    A +L 
Sbjct: 99  SGGELTVAQRAGFPMERISFHGNNKSTVELKLALQLGVGRIILDNWSELERLTHLADELG 158

Query: 116 KKI--GLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFH 164
           ++    LR+ P V              S+ G   +           +  +  ++ GL  H
Sbjct: 159 QRPAVLLRVAPGVETDTHRYLQTGHAASKFGFPLQNGEAKTAILRILGEDKLHLVGLHAH 218

Query: 165 NNCENKSFLCFSAMLKNIEKEFGHFITQIEWI--------SLGGGIHFTDKDYPVKDFCQ 216
           +    +    +   L ++         + +W           G           +    Q
Sbjct: 219 SGTMLRETRPYEECLVHLLSLAKAIYDETQWWPEEVSPGGGWGIDTPDQLGTPGLDQLAQ 278

Query: 217 RLKEFSEKY----------SVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSS 264
            L+   +            +  + LEPG +IV         +  +         + VD  
Sbjct: 279 ALQHQMQVMLASISNGTLPAPTLILEPGRSIVARAGVALYRIGALKATPAGTTYLFVDGG 338

Query: 265 VEAHVPDYLLYQESA----TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
           +  ++   L +              G     V GR C +GD+  +      ++ G+ +  
Sbjct: 339 MADNIRPALYHALYTALPVEHISVPGSVDYCVSGRYCESGDMLIDNVRLPAMREGELLLL 398

Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
                Y +   + +N +  P + +          R  +Y+D    
Sbjct: 399 PLAGAYCLPMASNYNLVPRPGVLLVEEGRVQVMERRETYDDILAR 443


>gi|327470417|gb|EGF15873.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK330]
          Length = 416

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 55/392 (14%), Positives = 117/392 (29%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   +S  
Sbjct: 19  PTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGCGVDCASYV 78

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++  +  F G+   ++       E         TI  +    +   K+ A        
Sbjct: 79  ELLMSQKLGFAGQDIMFSSNNTPAEEFQFARDLGATINLDAYEDVAFLKEAAGIPKIISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCEN---- 169
                 V      + D     ++ G      I++  +         G+            
Sbjct: 139 RYNPGGVFELGTSIMDNP-EEAKFGMTKDQLIQAFKELKELGAEKFGIHAFLASNTVSND 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227
                   + +   +       ++++I+L GG+    +    ++    + +   +     
Sbjct: 198 YYPELARQLFELAVEVVAETGVELDFINLSGGVGINYQPEGEENDIAVIGQGVRQAYEAI 257

Query: 228 ---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                    +IY E G  ++     L T V    +  +  + VD+S    +   +     
Sbjct: 258 LTPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKKTYRTYLGVDASAVNLLRPAMYGSYH 317

Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                +          V G  C   D F         +IGD +   D   ++ +    +N
Sbjct: 318 HITNMDRPEGETEIVDVVGSLCENNDKFAINRPLPVSQIGDTLVIHDTGAHSFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                +  +   D  ++ IR      DY+  L
Sbjct: 378 AKLRSSEILLEQDDNVRMIRRAEKPEDYFATL 409


>gi|311278213|ref|YP_003940444.1| diaminopimelate decarboxylase [Enterobacter cloacae SCF1]
 gi|308747408|gb|ADO47160.1| diaminopimelate decarboxylase [Enterobacter cloacae SCF1]
          Length = 420

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 58/398 (14%), Positives = 117/398 (29%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +           V +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAQL----GRFDV-VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D    A +S     +   +V  L +    A      +
Sbjct: 82  RALAAGYAPQTHPDDIVFTADVIDEATIARVSELRIPVNAGSVDMLAQLG--AVSPGHPV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G    D       I+    N+ G+  H       +
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYSDLPAALAVIQRYGLNLIGIHMHIGSGVD-Y 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                +   + ++   F   ++ IS GGG+               Y       R +    
Sbjct: 199 GHLEQVCGAMVRQVIDFGQDLQAISAGGGLSIPYREGEEAIDTDHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATI 281
             + V++ +EPG  +V     L + V  +     ++ V++D+     +   +        
Sbjct: 259 LGHPVKLEIEPGRFLVAEAGVLVSQVRSVKQMGSRHFVLIDAGFNDLMRPAMYGSYHHIT 318

Query: 282 --------YPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                            +V G  C +GD+F        E      V  GD +   D   Y
Sbjct: 319 ALAADGRDLTLAPLVETVVAGPLCESGDVFTQQEGGKVETRALPQVAPGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    + +        R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLYDNGSARLIRRRQTIQELLA 416


>gi|282859249|ref|ZP_06268370.1| diaminopimelate decarboxylase [Prevotella bivia JCVIHMP010]
 gi|282587982|gb|EFB93166.1| diaminopimelate decarboxylase [Prevotella bivia JCVIHMP010]
          Length = 383

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 69/372 (18%), Positives = 131/372 (35%), Gaps = 26/372 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALY-IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           I+TP+Y  D   L + L T    I K+ G  +  A+K  A   + + + +Y  G    S 
Sbjct: 11  IETPFYYYDSDILRHTLRTISEEISKHIGFHVHYAIKANANPDVLNIIKEYNLGADCVSG 70

Query: 61  YEVML-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHK- 116
            E+    +  F  +   Y    K      +  + D   FN  ++ +L    + A+K  K 
Sbjct: 71  GEIERSINSGFPAKKVVYAGVGKADWEIELALDYDIFCFNVESLEELAIINEIAEKKEKI 130

Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCE 168
            K+  RINP+V              ++ G   +D  ++       +     GL FH   +
Sbjct: 131 AKVCFRINPNVVAHTHASITTGLAENKFGIALQDIHKAIKVAKALKNIEFIGLHFHIGSQ 190

Query: 169 NKSFLCF---SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ-------RL 218
                 F      +  I+ +      +++ I++GGG+     +                 
Sbjct: 191 ILDMDDFIALCNRINEIQDDLEVKGIKLKIINVGGGLGIDYNNPSENLIPNFKLYFDTYA 250

Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQE 277
           K    +   +++ E G ++     +L T VL I  +      + D+ +   V   L    
Sbjct: 251 KYLQLREGQEVHFELGRSVTGQMGSLITKVLYIKHSSTKKFAILDAGMTDLVRPALYQAH 310

Query: 278 S--ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                +       T  V G  C + DIF +      +  GD ++ +    Y     + +N
Sbjct: 311 HKIINLSSTEVKETYDVVGPICESSDIFAKDILLPKLHRGDYVALQSAGAYGEIMASQYN 370

Query: 336 GINMPTIAVKNV 347
              +P   + + 
Sbjct: 371 CRKLPIGYLSDK 382


>gi|261346253|ref|ZP_05973897.1| diaminopimelate decarboxylase [Providencia rustigianii DSM 4541]
 gi|282565561|gb|EFB71096.1| diaminopimelate decarboxylase [Providencia rustigianii DSM 4541]
          Length = 419

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 57/400 (14%), Positives = 119/400 (29%), Gaps = 46/400 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D + ++  +     +       +  A K  +   +   +        S SL E
Sbjct: 25  GTPVWVYDSEVIVERIKQLQ-LFD----TVRFAQKASSNIHILRLMRTQGVKVDSVSLGE 79

Query: 63  VMLGH-EKFGGET----HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
           +       F          +     D      ++  D  +   ++  L +  +   K   
Sbjct: 80  IERALVAGFQPGRAKSEIVFTADVLDPATLHKVTELDIPVNAGSIDMLKQIGE--YKAGH 137

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170
            + LRINP   +      +     S+ G    D       I      + G+  H      
Sbjct: 138 PVWLRINPGFGHGHSQKTNTGGENSKHGIWHHDLPEALAIIRQYNLKLVGIHMHIGSGVD 197

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK------ 224
            +   + +   + +        I+ IS GGG+    ++                      
Sbjct: 198 -YQHLANVCDAMVELVISAGVDIDAISAGGGLSTPYREQDELIDVAHYYSLWNSARQRIE 256

Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA 279
               + +++ +EPG  +V  +  L   V  + +   ++ V+VDS     +   +      
Sbjct: 257 QHLGHKIELEIEPGRYLVAESGVLLAQVRAVKNMGSRHYVLVDSGFNDLMRPAMYGSYHH 316

Query: 280 --------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVA 324
                       N      ++ G  C +GD+F        E      VK+GD + F D  
Sbjct: 317 ISVLPANGNSVENQPLKETIIAGPLCESGDVFTQLEGGMVETRLLPDVKVGDFLVFHDTG 376

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            Y  +  + +N   +    +          R  +  +   
Sbjct: 377 AYGASMSSNYNSRPLLPEVMFVDGKPTLIRRRQTIQELLA 416


>gi|301103215|ref|XP_002900694.1| diaminopimelate decarboxylase, putative [Phytophthora infestans
           T30-4]
 gi|262101957|gb|EEY60009.1| diaminopimelate decarboxylase, putative [Phytophthora infestans
           T30-4]
          Length = 410

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 50/379 (13%), Positives = 108/379 (28%), Gaps = 31/379 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D+Q + +N    L   +      +   A+K      +   L+Q   G   SS 
Sbjct: 21  GTPLQIYDEQLIRDNARRLLTAFRAHFPDFQQFYAVKALPNPAILKLLHQEGCGMDCSSS 80

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDK--AQKLHK 116
            E+ +  E    G+   +   +               +  + VS ++             
Sbjct: 81  AELHIVKELGVPGDQVIFTSNFTAKNDLGTAFDQGVIMNLDDVSLVDSLVAVRGKCPELM 140

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENK 170
              L      + S+        P ++ G      +E+  K         G+         
Sbjct: 141 SFRLNPGIGRTDSETKSNVLGGPDAKFGVPPFQIVEAYRKAQQAGAKGFGIHMMTGSCVM 200

Query: 171 SFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-- 224
           +   +   +  +             + E++++GGG+    ++       + + +   +  
Sbjct: 201 NQEYWRETVTVLFNTIVQLKKELGIEFEFMNIGGGLGIPYREDQEPVNVEAIAKMLREVF 260

Query: 225 ----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLL 274
                        ++ +E G  +      L T    I E       VD+ +   +   + 
Sbjct: 261 DEAVKEHGLQTLPRLCMENGRFMTGPFGWLVTRCEAIKETYGRYYGVDACMAHLMRPGMY 320

Query: 275 YQESATIYPNTGPYTA---MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                   P           V G  C   D F +       ++GD     D   ++ +  
Sbjct: 321 GAFHHISIPARANEEVSPSHVVGTLCENNDWFAKDRPLPKAQVGDLFVIHDTGAHSHSMG 380

Query: 332 NWFNGINMPTIAVKNVDGT 350
             +NG       +   DG+
Sbjct: 381 FQYNGKLRAPEVLLRADGS 399


>gi|306830172|ref|ZP_07463356.1| diaminopimelate decarboxylase [Streptococcus mitis ATCC 6249]
 gi|304427698|gb|EFM30794.1| diaminopimelate decarboxylase [Streptococcus mitis ATCC 6249]
          Length = 418

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 61/392 (15%), Positives = 115/392 (29%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   SS  
Sbjct: 19  PTPFHLYDEKGIREKARAVNQAFSWNEGFKEYFAVKATPTPAILKILKEEGCGVDCSSYV 78

Query: 62  EVMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++ H+    G E    +    D E         TI  +    +   +  A        
Sbjct: 79  ELLMSHKLGFVGPEIMFSSNNTPDQEYAYARELGATINLDAFEDIEHLERAAGIPEIISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169
                 V      + D     ++ G       E+         +   ++  L  +     
Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTRDQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                   + +   +        +++I+L GGI    +     +    + E   K   + 
Sbjct: 198 YYPELSRQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEPNDIAMIGEGVRKVYEEV 257

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     I+ E G  ++     L T V    +  +  + VD+S    +   +     
Sbjct: 258 LTPVGLGQVKIFTELGRFMLAPHGVLVTKVTHKKKTYRTYLGVDASAVNLIRPAMYGAYH 317

Query: 279 A--TIYPNTGPYTA-MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
               +    GP     V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HVTNLTHPDGPVEVVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                   +   +G  + IR      DY+  L
Sbjct: 378 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 409


>gi|237801879|ref|ZP_04590340.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331024737|gb|EGI04793.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 419

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 62/383 (16%), Positives = 125/383 (32%), Gaps = 29/383 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP+++ D++ ++           ++  +   A+K      +   L +   G   SS  E
Sbjct: 23  PTPFHIYDERAIVQTHRHVAQAFADSAFRQYFAVKALPTPAILSLLLKEGSGLDCSSPVE 82

Query: 63  VMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           +ML       G+   +        E    L     I F+  S L +       +  ++  
Sbjct: 83  LMLAKRLGARGDDIVFTSNNTSLSEYQMALQAGALITFDDRSMLEQVVALPDIVAFRVSP 142

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI---------KNVNGLMFHN-NCENK 170
               + S         N   S+ G    + ++S             ++G+M  N      
Sbjct: 143 HGVIARSSQ-----MGNAQQSKFGIPEAELVQSYREAWDRGARRFGIHGMMCANELSLEA 197

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF--------CQRLKEFS 222
           +      +++   +       ++E+I++GGG+    +                + LK+  
Sbjct: 198 AVQAGVQVIEVGARVAREASIELEYINIGGGLGIPYRIDDQALDLTAYADALKRALKQAF 257

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
              + ++ +E G  I      L + V++     + +V +D+S+ A +   L         
Sbjct: 258 PHNTPKLLMELGRYISGPHGVLVSRVINRCSKGREIVGLDASMSALMRPGLYGAYHHLTL 317

Query: 283 PNTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
           P           V G  C   D F          IGD     D   +       +NG   
Sbjct: 318 PFADQRPEGVFDVVGALCENFDKFAVDRPLPSPLIGDLALIHDTGAHGHAMGFTYNGRLR 377

Query: 340 PTIAVKNVDGTI-KAIREFSYND 361
           P   +   DG I +  R  +++D
Sbjct: 378 PAELMLTDDGDIVEIRRAETFDD 400


>gi|94984897|ref|YP_604261.1| diaminopimelate decarboxylase [Deinococcus geothermalis DSM 11300]
 gi|94555178|gb|ABF45092.1| diaminopimelate decarboxylase [Deinococcus geothermalis DSM 11300]
          Length = 385

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 60/374 (16%), Positives = 118/374 (31%), Gaps = 25/374 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D  +L   L            ++  A+K      +   L     G    S  E
Sbjct: 16  GTPLYVYDAAELDAALARVRAAFGE--ARVFYAMKANPNLTLLRRLRAAGVGFECVSAGE 73

Query: 63  VMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           +         G        A    E  A      T+I +   ++            K  +
Sbjct: 74  IARAEHVGASGDALLINGPAKSAQEYAAGAQLGATLIVDRAEEVGLL-----PPRSKALV 128

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174
           R+NP+++ S           S+ G   +        + +   +  GL  H     +    
Sbjct: 129 RVNPALAVSTHDHLATGAAGSKFGVTLEQAPDVLRALRAAGHDARGLHVHIGSAIREAAD 188

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
           FSA    + +        +E + +GGG         +    +  +  +  +  Q+++EPG
Sbjct: 189 FSAAFARVAELRPQTG-NLEVLDVGGGWSVGA---DLPGIAREARAAAAVFGAQLWVEPG 244

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT----- 289
             +V    TL T V+      +N ++ D+ +   +   L   +         P       
Sbjct: 245 RYLVAQAGTLLTRVVGTKRTGRNFLLTDAGMTELLRPMLYGAQHPVTALWDDPQPETAGE 304

Query: 290 -AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348
              V G +C +GD+            GD ++  +   Y  +  + +   + P  A+ +  
Sbjct: 305 RWDVAGPACESGDLLARDVCLPSPHPGDLLAIAEAGAYGASMSSSYLTRSRPAEALWDGS 364

Query: 349 GTIKAIREFSYNDY 362
             I   R  +  + 
Sbjct: 365 DWILIRRRETPQEL 378


>gi|333030136|ref|ZP_08458197.1| diaminopimelate decarboxylase [Bacteroides coprosuis DSM 18011]
 gi|332740733|gb|EGJ71215.1| diaminopimelate decarboxylase [Bacteroides coprosuis DSM 18011]
          Length = 386

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 64/368 (17%), Positives = 120/368 (32%), Gaps = 26/368 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           + TP+Y  D   L   LDT     K     K+  ALK      +   + +   G    S 
Sbjct: 13  LDTPFYYYDTCLLQETLDTVKLQLKGQDQFKVHYALKANVNSEILQMIRKNGFGADCVSG 72

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115
            E+       F  E   +    K      +  +     FN  ++ +L    + A      
Sbjct: 73  GEIRAAIQAGFKPENIVFAGVGKSDWEIELGLDLGIFCFNVESIPELEIINELALNMGKR 132

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCE 168
            ++ LRINP+V  +        +  ++ G    D  +           +  GL FH   +
Sbjct: 133 AQVCLRINPNVKANTHANIATGQAENKFGISLHDLDKVMECVKQLKAIDFVGLHFHIGSQ 192

Query: 169 NKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQ-------RL 218
                 F A+   + +          +I  I++GGG+         +             
Sbjct: 193 ILDMADFRALCNRVNELLDRLEGRGIRIPHINVGGGLGIDYAHPNRQAIPNFESYFDVYD 252

Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL--Y 275
                +    ++ E G ++V    +L + VL + E       + D+ +   +   L   Y
Sbjct: 253 THLRIRSYQTLHFELGRSLVGQCGSLISRVLYVKEGTNKKFAILDAGMNDLIRPALYQAY 312

Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
            +   +  +       V G  C + D+FG+      V  GD ++      Y     + +N
Sbjct: 313 HKIENLSSDEALEAYDVVGPVCESSDVFGKSIDLNKVSRGDFMAIRSAGAYGEVMASTYN 372

Query: 336 GINMPTIA 343
             ++P   
Sbjct: 373 CRSLPNAY 380


>gi|290476309|ref|YP_003469213.1| diaminopimelate decarboxylase, PLP-binding [Xenorhabdus bovienii
           SS-2004]
 gi|289175646|emb|CBJ82449.1| diaminopimelate decarboxylase, PLP-binding [Xenorhabdus bovienii
           SS-2004]
          Length = 427

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 55/405 (13%), Positives = 119/405 (29%), Gaps = 51/405 (12%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   ++  ++            +  A K  +   +   +        + SL E
Sbjct: 27  GTPLWVYDSDIIIRKINRLKRFD-----IIRFAQKACSNTHILSLMRAQGVKVDAVSLGE 81

Query: 63  VMLGH-----EKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
           +                  +     D      +   D  +   ++  L +   +  +   
Sbjct: 82  IERALYAGYQPGRDRSEIVFTADLIDEITLNRVIELDIPVNVGSIDMLEQIGTR--QSGH 139

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170
            I LRINP   +      +     S+ G   +D       +      + GL  H      
Sbjct: 140 PIWLRINPGFGHGHSQKTNTGGENSKHGIWFQDLPLAIEKVRQYGLKLVGLHMHIGSGVD 199

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK------ 224
            +   + +   + ++       I+ IS GGG+    K        +       K      
Sbjct: 200 -YQHLANVCNAMVEQVISCGEDIQAISAGGGLSIPYKTGDEIVDTEHYYSLWHKARQRIE 258

Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA 279
               + V++ +EPG  +V  +  L   V  +     ++ V+VD+     +   +      
Sbjct: 259 RHLGHHVELEIEPGRFLVAESGILMAEVRAVKPMGSRHYVLVDAGFNDLMRPTMYGSYHH 318

Query: 280 T-------------IYPNTGPYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRIS 319
                         +  +   +  +V G  C +GD+F +             V +GD + 
Sbjct: 319 ISVLSVNSQHIDEAVSQDAELHETLVAGPLCESGDVFTQSAGGDVVPRLLPRVCVGDYLI 378

Query: 320 FEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           F D   Y  +  + +N   +    +          R  +  +   
Sbjct: 379 FHDTGAYGASMSSNYNSRPLIPEILFIEGDARLIRRRQTIEELLA 423


>gi|153813582|ref|ZP_01966250.1| hypothetical protein RUMOBE_04004 [Ruminococcus obeum ATCC 29174]
 gi|149830327|gb|EDM85419.1| hypothetical protein RUMOBE_04004 [Ruminococcus obeum ATCC 29174]
          Length = 430

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 66/391 (16%), Positives = 120/391 (30%), Gaps = 29/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +  N          N G K   A+K      +   L +Y  G   SS+ 
Sbjct: 20  PTPFHLYDEKGIRENAKALKEAFAWNKGFKEFFAVKATPNPYLIQILQEYGCGCDCSSMT 79

Query: 62  EVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+ML        G+    +    + E          I  + ++ +   +     + K I 
Sbjct: 80  ELMLSKAIGCKKGDIMFSSNDTPEAEFRYANEIGGIINLDDITHIKAVEKAVGYIPKTIS 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169
            R NP   +        N   ++ G   +   E+         E   ++  L  +     
Sbjct: 140 CRYNPGGVFKISNDIMDNPGDAKYGMTTEQIFEAFRTLKAKGAENFGIHAFLASNTVTNE 199

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
              +    M +   K        I +I+L GGI    +     +  + + E   K   + 
Sbjct: 200 YYPMLAKVMFELAVKLQKETGAHIGFINLSGGIGIPYRPDQTPNDIRVIGEGVRKVYEEV 259

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     IY E G  ++     L T  +      K  + VD+     +   +     
Sbjct: 260 LVPAGMGDVAIYTELGRFMMGPYGCLVTKAIHEKHTHKEYIGVDACAVNLMRPAMYGAYH 319

Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                            + G  C   D F    +   + +GD +   D   +       +
Sbjct: 320 HITVMGKEDQPCDRLYDITGSLCENNDKFAIDRYLPKIDMGDLLVIHDTGAHGFAMGYNY 379

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       + + DGT   IR   +  DY+ 
Sbjct: 380 NGKLKSAEILLHEDGTFDMIRRAETPRDYFA 410


>gi|91212236|ref|YP_542222.1| diaminopimelate decarboxylase [Escherichia coli UTI89]
 gi|117625090|ref|YP_854078.1| diaminopimelate decarboxylase [Escherichia coli APEC O1]
 gi|218559850|ref|YP_002392763.1| diaminopimelate decarboxylase [Escherichia coli S88]
 gi|237706500|ref|ZP_04536981.1| diaminopimelate decarboxylase [Escherichia sp. 3_2_53FAA]
 gi|91073810|gb|ABE08691.1| diaminopimelate decarboxylase [Escherichia coli UTI89]
 gi|115514214|gb|ABJ02289.1| diaminopimelate decarboxylase [Escherichia coli APEC O1]
 gi|218366619|emb|CAR04373.1| diaminopimelate decarboxylase, PLP-binding [Escherichia coli S88]
 gi|226899540|gb|EEH85799.1| diaminopimelate decarboxylase [Escherichia sp. 3_2_53FAA]
 gi|294490323|gb|ADE89079.1| diaminopimelate decarboxylase [Escherichia coli IHE3034]
 gi|307625570|gb|ADN69874.1| diaminopimelate decarboxylase [Escherichia coli UM146]
 gi|315289397|gb|EFU48792.1| diaminopimelate decarboxylase [Escherichia coli MS 110-3]
 gi|323951704|gb|EGB47579.1| diaminopimelate decarboxylase [Escherichia coli H252]
 gi|323957422|gb|EGB53144.1| diaminopimelate decarboxylase [Escherichia coli H263]
          Length = 420

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 56/393 (14%), Positives = 114/393 (29%), Gaps = 46/393 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D      +S     +   +V  L++    +     ++
Sbjct: 82  RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G          D I+     + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYA 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                    + +    F   ++ IS GGG+             + Y       R +    
Sbjct: 200 HLEQVCGAMVRQVL-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V++ +EPG  +V     L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVKLEIEPGRFLVAQAGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     +      +V G  C +GD+F        E      VK  D +   D   Y
Sbjct: 319 ALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKACDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
             +  + +N   +    + +        R  + 
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411


>gi|240103377|ref|YP_002959686.1| Diaminopimelate decarboxylase (lysA) [Thermococcus gammatolerans
           EJ3]
 gi|239910931|gb|ACS33822.1| Diaminopimelate decarboxylase (lysA) [Thermococcus gammatolerans
           EJ3]
          Length = 411

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 73/380 (19%), Positives = 129/380 (33%), Gaps = 31/380 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK---LLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP Y+ +  ++ +N        K AG +   +  A+K      +   + +   G  ++S
Sbjct: 31  GTPVYIYNLGRIRDNYLRMTDALKKAGFREWRIHYAMKANNNREVLGLIRELGGGIDATS 90

Query: 60  LYEVMLGHE-KFGGETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKD-------- 109
             EV L  E  F  +   +                   I F+++S L +F          
Sbjct: 91  PGEVKLAREIGFEDDDIIFTGTSLSNGDLEFLAKTKVLINFDSISSLRRFNGEEGRKVGL 150

Query: 110 KAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN 169
           +         +    +       +        +  ++  D IE +   ++ L  H   + 
Sbjct: 151 RINTGVGIGRVEKTTTGGLEAGSIPVKFGISGKAIDRAFDLIEEKGFELHCLHHHVGSDW 210

Query: 170 ------KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLK 219
                 + F     +LK  EK    F   +E I LGGG         +++PV +F QR+K
Sbjct: 211 VGEKIGRYFQALDNLLKVAEKAEARFGGSVEVIDLGGGYGVPHSAEEEEFPVYEFFQRVK 270

Query: 220 EFSEKYSV---QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ 276
           E  E+Y     ++ +EPG  +V++   L   V  + E    + +   +         LY 
Sbjct: 271 EHMEEYGFGDLKVIVEPGTYLVSDAGILVAQVNTVEEKNGRIFVGVDAGLNVFNSPALYN 330

Query: 277 ESATIYPN-----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
               I             A V G  C +GDIF        ++ GD I+  +   Y     
Sbjct: 331 YYHEIVVCNRVSSEEKMVATVVGNICESGDIFAVDRELPKIEEGDYIAILNAGAYGYVMA 390

Query: 332 NWFNGINMPTIAVKNVDGTI 351
           N +N        V     +I
Sbjct: 391 NNYNLRPKGKEVVVGRSRSI 410


>gi|332878366|ref|ZP_08446090.1| diaminopimelate decarboxylase [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|332683691|gb|EGJ56564.1| diaminopimelate decarboxylase [Capnocytophaga sp. oral taxon 329
           str. F0087]
          Length = 386

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 67/365 (18%), Positives = 121/365 (33%), Gaps = 26/365 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTAL-YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           ++TP+Y  D + L   LDT      KN    +  A+K  A   +   ++    G    S 
Sbjct: 13  VRTPFYYYDTELLRKTLDTIKAETGKNDNYHVHYAVKANANRKLLRIISAAGFGADCVSG 72

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E   +    K      V  +         ++ +L      A +  K 
Sbjct: 73  GEIKACLDAGFPAEKIVFAGVGKSDWEINVGLDAGIAYFNVESIPELEVINQLAGEKDKI 132

Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168
                RINP V              ++ G    D           +     GL FH   +
Sbjct: 133 ARVSFRINPDVGAHTHANITTGLAENKFGIAMADMEKVIEIAASLKHVEFVGLHFHIGSQ 192

Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFS 222
                 F+     +  ++ +       ++ I++GGG+    +     PV  F    + + 
Sbjct: 193 ILEMGDFVALCNRVNELQAQLERHHITVKNINVGGGLGIDYQHPNEVPVPHFADYFQTYR 252

Query: 223 EKYS----VQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQE 277
           +  +     Q++ E G A+V    +L T VL + +   K   IVD+ +   +   L    
Sbjct: 253 KHLNLRPDQQLHFELGRAVVGQCGSLITRVLYVKQATYKQFAIVDAGMTDLIRPALYQAF 312

Query: 278 S--ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                +  +    T  V G  C + D+F +         GD ++      Y     + +N
Sbjct: 313 HSIENLSSDERKETYDVVGPICESSDVFVKAFDLNRCHRGDLLALRSAGAYGEIMASRYN 372

Query: 336 GINMP 340
              +P
Sbjct: 373 CRELP 377


>gi|241667894|ref|ZP_04755472.1| diaminopimelate decarboxylase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876434|ref|ZP_05249144.1| diaminopimelate decarboxylase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842455|gb|EET20869.1| diaminopimelate decarboxylase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 394

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 58/372 (15%), Positives = 117/372 (31%), Gaps = 30/372 (8%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           TP Y+ D   L +   +A           ++  A+K      + +   +   G    S  
Sbjct: 23  TPCYIYDSTLLEDTFASAKKALDKNFKNAEIHYAIKANHHPKIVNIAKKNGMGIDCVSGG 82

Query: 62  EVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK--FKDKA--QKLHK 116
           E+    E+    +   +    K      +  + +   FN+ S          A  +    
Sbjct: 83  EIRRALEQNVDPQHIVFAGVGKADWEIELAIDNNIFAFNSESLEEIEVISQIASLKNKQV 142

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCE 168
            I LR+NP++           +   + G    D ++            N+ GL +H   +
Sbjct: 143 NICLRVNPNIDAQTHHYISTGQFDDKFGIAFIDVLKWLKNDFQNFDNINIIGLHYHVGSQ 202

Query: 169 NKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLK 219
             ++  F           K        IE I+ GGG+                ++  R +
Sbjct: 203 ILNYQVFQSLAITTNEHIKLLKQNDINIEHINFGGGLGIDYQNPHQNPIVDFDNYFARFR 262

Query: 220 EFSEKYSV-QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQE 277
           EF E     +++ E G ++V  +  L + VL        +  I+D+ +   +   L   +
Sbjct: 263 EFFEYCDDVKLHFELGRSLVGQSGVLVSQVLFNKVTQDTHFAIIDAGMTELIRPALYQAQ 322

Query: 278 S----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                             + G  C + D+F +++    +K GD ++      Y     + 
Sbjct: 323 HKIEALIDESVDEKQHYHIVGPICESSDVFAKYYQLPKIKRGDLLAIYSAGAYGKVLASE 382

Query: 334 FNGINMPTIAVK 345
           +N          
Sbjct: 383 YNLRPTVQEYFI 394


>gi|222106726|ref|YP_002547517.1| diaminopimelate decarboxylase [Agrobacterium vitis S4]
 gi|221737905|gb|ACM38801.1| diaminopimelate decarboxylase [Agrobacterium vitis S4]
          Length = 416

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 53/403 (13%), Positives = 118/403 (29%), Gaps = 49/403 (12%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   +   +             +  A K  +   +   + +      + +L E
Sbjct: 17  GTPVWVYDADTIRARIAQLSSFDV-----IRFAQKACSNTHILRQMREAGVVVDAVTLGE 71

Query: 63  VMLGH--------EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114
           +                 E       +    +D V+++   +   ++  L++    A+  
Sbjct: 72  IERARRAGYVTGQASGVAEIVFTADVFDRSTLDRVVADKIEVNAGSIDMLHQLG--ARSP 129

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCE 168
             ++ LRINP   +      +     S+ G   +        +      + GL  H    
Sbjct: 130 GHRVWLRINPGFGHGHSNKTNTGGENSKHGIWFEQLQEALAAVRRYSLTLVGLHMHIGSG 189

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE- 223
              +     +   +          IE IS GGG+        ++     +        + 
Sbjct: 190 VD-YRHLQRVCGAMVTFCCELGADIEAISAGGGLSIPYKDGEEEIDTVHYFALWDSARKQ 248

Query: 224 -----KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQE 277
                ++ +++ +EPG  +  ++  L   V         + ++VD+         +    
Sbjct: 249 IEEYLRHKIRLEIEPGRFLTADSGVLLAEVRATKTMGSNHFILVDAGFSDLARPAMYGSY 308

Query: 278 SATIY---------PNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFE 321
                          +  P   +V G  C +GD+F        E       + GD + F 
Sbjct: 309 HGISVLPAPNNSAPHSDVPVPTVVAGPLCESGDVFTQGEFGTIEKRDLPQAQPGDYMVFH 368

Query: 322 DVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           D   Y  +  + +N        +   D      R  + +D   
Sbjct: 369 DTGAYGASMSSNYNSRLYAPEVLIEGDNHRLIRRRQTLDDLLA 411


>gi|121611670|ref|YP_999477.1| diaminopimelate decarboxylase [Verminephrobacter eiseniae EF01-2]
 gi|121556310|gb|ABM60459.1| diaminopimelate decarboxylase [Verminephrobacter eiseniae EF01-2]
          Length = 414

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 52/398 (13%), Positives = 111/398 (27%), Gaps = 44/398 (11%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP ++ D   ++  +             +  A K  +   +   +        + S  E+
Sbjct: 19  TPLWVYDAATIVERIARLSRFD-----TIRFAQKACSNIHILALMRAQGVLVDAVSRGEI 73

Query: 64  MLGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKK 117
           +                 +     D    A +      +   ++  L++   ++      
Sbjct: 74  LRALAAGYQTGAQPAQIVFTADLFDAATLACVIEHRVPVNAGSMDMLHQLGPRS--PGHA 131

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN-- 169
           + LRINP   +      +     S+ G    D       I     ++ GL  H       
Sbjct: 132 VWLRINPGFGHGHSHKTNTGGEHSKHGIWHTDLPAALAAIRQHGLDLVGLHMHIGSGVDY 191

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE------ 223
           +        +  + +        +  IS GGG+    +               E      
Sbjct: 192 RHLAQVCDAMVALVRGVRAAGHDLRAISAGGGLSVPYRSGDPVVDTAHYHGLWEAARQQA 251

Query: 224 ----KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES 278
                + + + +EPG  +V  +  L   V    +   N  ++ D+     +   +     
Sbjct: 252 QAIIGHPLTLEIEPGRYLVAESGVLLAAVCATKQVGSNHFVLLDAGFNELLRPSMYGSYH 311

Query: 279 ATIYPN-----TGPYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVAGY 326
           A                +V G  C AGD+F +            P ++GD +   D   Y
Sbjct: 312 AMSLLRRDGASAAGRPTVVAGPLCEAGDVFTQSGDGLVLPRDLPPAEVGDLLLIHDTGAY 371

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
                + +N   +   A+          R  + ++   
Sbjct: 372 GATMSSNYNTRPLSAEALVEGAQARLIRRRQTVDELLA 409


>gi|304438258|ref|ZP_07398199.1| diaminopimelate decarboxylase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304368624|gb|EFM22308.1| diaminopimelate decarboxylase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 431

 Score =  193 bits (490), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 60/393 (15%), Positives = 116/393 (29%), Gaps = 31/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D+ K+  N              +   A+K      +   L++   GT  SS  
Sbjct: 33  PTPFHLYDEAKIRANFRRLRETFAWAPSFREHFAVKALPNPRIVQILHEDGAGTDCSSTP 92

Query: 62  EVML-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           E+++       GE         D   +      +      +  L+     A+       L
Sbjct: 93  ELIISAAAGVKGEEIMLTSN--DTPYEEFQKAIELGAVINLDDLSHLDYMAKHAGLPNLL 150

Query: 121 RINPSVSYSKFILADPNRP-FSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSFL 173
               +            +P  ++ G   +   E   + +       G+            
Sbjct: 151 CFRYNPGNLVEGNDIIGKPVEAKYGLTREQMFEGYRRALEMGVKRFGVHTMVISAELRTE 210

Query: 174 CF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
            F      M +   +        +E+++LGGG     +          +    E+   +I
Sbjct: 211 AFLLTARLMFELAAELKEKLGIHVEFVNLGGGFGIPYRPEQDGIDYDAVGAGIERLYNEI 270

Query: 230 Y-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                        E    I  +   L +TVL   +  K  + +DS +   +   +     
Sbjct: 271 MRPAGLGDVGIRTESARGITGDAGWLVSTVLHEKDTYKKYIGLDSCMANLMRPAIYGAYH 330

Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        + IGD +   D   +       +
Sbjct: 331 HITVLGKENAPADHVYDVTGSLCENNDKFAIDRALPKIDIGDILIIHDTGAHGSAMGFNY 390

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           N        ++ +DG+I+ IR   + +DY+  L
Sbjct: 391 NAKLHCAELLRRMDGSIELIRRPQTIDDYFATL 423


>gi|126699670|ref|YP_001088567.1| diaminopimelate decarboxylase [Clostridium difficile 630]
 gi|255307059|ref|ZP_05351230.1| diaminopimelate decarboxylase [Clostridium difficile ATCC 43255]
 gi|115251107|emb|CAJ68938.1| Diaminopimelate decarboxylase [Clostridium difficile]
          Length = 430

 Score =  193 bits (490), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 67/399 (16%), Positives = 123/399 (30%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           +TP Y+ D+  +  N    +   K      K+  A K F    M + +N+        S 
Sbjct: 29  QTPLYVFDEALVRQNCREYIEYFKAREGKNKVAYAGKAFLPLYMCNLINEEQMCLDVVSG 88

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+       F  E   ++   K  +   +         + +   +L+  +   +     
Sbjct: 89  GELYTAYKSNFPMEKVFFHGNNKTKKEINMGLDLGVGKFVVDNFYELDLLEALCEDKGKT 148

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           ++I  RI P +           +  S+ G            +   E +   + GL  H  
Sbjct: 149 QEIYFRITPGIEAHTHDYIKTGQIDSKFGFALVNGDLFRAIEKLSEYKNIKLVGLHAHIG 208

Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            +             M+  +++    F  Q+  I LGGG+     +       +   E  
Sbjct: 209 SQIFDVEPYIDTVDIMMNLVKEIKEKFNIQLTEIDLGGGVGVYYSEGDKPKTIKEFCETI 268

Query: 223 EKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
              +             + +EPG +IV N  +   TV  I +     V V     +  +V
Sbjct: 269 ITKAETSCKELGIEVPTLVIEPGRSIVANAGSTLYTVGSIKDIKDVRVYVSVDGGMTDNV 328

Query: 270 PDYLLYQESATIYPNTGPYTAM----VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L          N   + AM    + G+ C +GDI         +K GD +       
Sbjct: 329 RPSLYQASYECSIVNKINHEAMNHVTIAGKCCESGDILIGDINIMDIKSGDILITTSTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  + +N I    +            +  SY D   
Sbjct: 389 YGYSMSSNYNKIPRAAVVSVFDGNDKIICKRQSYEDLLA 427


>gi|325696353|gb|EGD38244.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK160]
          Length = 416

 Score =  193 bits (490), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 54/392 (13%), Positives = 117/392 (29%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   +S  
Sbjct: 19  PTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGCGVDCASYV 78

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++  +  F  +   ++       E         TI  +    +   K+ A        
Sbjct: 79  ELLMSQKLGFAEQDIMFSSNNTPAEEFQFARDLGATINLDAYEDVAFLKEAAGIPKIISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMF----HNNCEN 169
                 V      + D     ++ G      I++  +         G+      +    +
Sbjct: 139 RYNPGGVFELGTSIMDNP-EEAKFGMTKDQLIQAFKELKELGAEKFGIHALLASNTVSND 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227
                   + +   +       ++++I+L GG+    +    ++    + +   +     
Sbjct: 198 YYPELAHQLFELAVEVVAETGVELDFINLSGGVGINYQPEGEENDIAVIGQGVRQAYEAI 257

Query: 228 ---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                    +IY E G  ++     L T V    +  +  + VD+S    +   +     
Sbjct: 258 LTPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKQTYRTYLGVDASAVNLLRPAMYGSYH 317

Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                +          V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HITNMDRPEGETEIVDVVGSLCENNDKFAINRPLPVSQIGDTLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                +  +   D  ++ IR      DY+  L
Sbjct: 378 AKLRSSEILLEQDDNVRMIRRAEKPEDYFATL 409


>gi|126696535|ref|YP_001091421.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT
           9301]
 gi|126543578|gb|ABO17820.1| Diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT
           9301]
          Length = 457

 Score =  193 bits (490), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 55/397 (13%), Positives = 114/397 (28%), Gaps = 35/397 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P Y++D+  L N+        +         + A K  ++  M   ++    G  + S
Sbjct: 49  DSPLYILDEITLRNSCKAYKKALEKYYPGKSLPIYASKANSSIFMSSLVSSEGLGLDAVS 108

Query: 60  LYEVMLG-HEKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLH 115
             E++         E   ++     D E++  + N   +I +    L +  +   A    
Sbjct: 109 EGELLTAIKGGVPNEKIVFHGNNKSDKELEFAVRNNIKVIVDNDYDLERLDEISNAFNHD 168

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCE 168
            +I +R  P +              S+ G   +           ++   + GL  H   +
Sbjct: 169 LEIMIRFTPGIECHTHEYIRTGSFDSKFGFGIEYLNILFNRISNTKHLKLKGLHAHIGSQ 228

Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
                    + + + K       F   +E +++GGG+     +           +     
Sbjct: 229 IFELDPHKDLGEIMVKVILEAKKFGHNVEELNVGGGLGIRYTESDDPPSIDEWVKTISSS 288

Query: 226 -----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDY 272
                         +  EPG +IV+        +    E         VD  +  +    
Sbjct: 289 VVEACKKNNLDFPTLMCEPGRSIVSTAGITIYKIGAFKEIPGIRTYLSVDGGMSDNPRPI 348

Query: 273 LLYQESATIY-----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
                 +                 + G+ C +GD+  +       K GD I       YN
Sbjct: 349 TYQSNYSACLVSNPFNINSKNKYTIAGKHCESGDVLFKEIELAECKTGDLICVFGTGAYN 408

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            +  + +N I  P   +          +  S  D   
Sbjct: 409 NSMSSNYNRIPRPATLLVKDGEAEIIQKRESPLDLLK 445


>gi|221633687|ref|YP_002522913.1| diaminopimelate decarboxylase [Thermomicrobium roseum DSM 5159]
 gi|221156044|gb|ACM05171.1| diaminopimelate decarboxylase [Thermomicrobium roseum DSM 5159]
          Length = 449

 Score =  193 bits (490), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 53/401 (13%), Positives = 111/401 (27%), Gaps = 38/401 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP YL D   +   +    +  ++   +  L+ A K FAA G+   L     G    S 
Sbjct: 39  GTPLYLYDVATIRAAIAAYRHGLESYPGETALVYAAKAFAAVGLLRLLASEGLGVDCVSE 98

Query: 61  YEVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+ L        E    +     ++    A+      I+ +   +L +    A+   K 
Sbjct: 99  GELALARAAGVPAERLVLHGNNKSEEELRFALELGVGRIVVDNHDELERLVAIARSTGKT 158

Query: 118 IGLRINPSVS---YSKFILADPNRPFSRLGEKCK--DKIESEIKNVN-------GLMFHN 165
           + + +  +     +         +  S+ G      D   +  + ++       G   H 
Sbjct: 159 VPILLRLNPGVEPHDTHAYRRTGQLDSKFGLPIVTGDAEAAVARCLSTPELALLGFHVHI 218

Query: 166 NCENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPV---------- 211
             +    + +   ++ +    G     F   +   S GGG                    
Sbjct: 219 GSQLFDLIPYQRAIEQVFAFAGELSRRFAFSLREFSPGGGFGIPYTTEDPVLDLAEATAQ 278

Query: 212 -KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268
              +       +     ++ LEPG ++V         V  +         V     +  +
Sbjct: 279 VSRWVAEAASMAGLPLPRLVLEPGRSLVGRAGMALYRVGSVKRLPGIRTYVAVDGGMADN 338

Query: 269 VPDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
           +   L       +              + G+ C +GD+            GD ++     
Sbjct: 339 IRPALYGARYLALPVIERADRRRERVTLVGKYCESGDVLVRDAVLPEPVPGDLVAIPVAG 398

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            Y +   + +N    P +            R  +  D    
Sbjct: 399 AYCLAMASNYNLARRPVVVALEAGRVELWQRRETIADLLAR 439


>gi|160878460|ref|YP_001557428.1| Orn/DAP/Arg decarboxylase 2 [Clostridium phytofermentans ISDg]
 gi|160427126|gb|ABX40689.1| Orn/DAP/Arg decarboxylase 2 [Clostridium phytofermentans ISDg]
          Length = 419

 Score =  193 bits (490), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 58/390 (14%), Positives = 111/390 (28%), Gaps = 30/390 (7%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           TP+Y+ D++ +  N          N G K   A+K      +   L +   G+  SS  E
Sbjct: 20  TPFYIYDEKGIRENARKLKEAFSWNKGFKEYFAVKATPNPFILQILKEEGCGSDCSSETE 79

Query: 63  VML--GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           +M+       G E    +    + E          I  +  + ++  K++          
Sbjct: 80  LMISEAVGITGSEIMFSSNNTPEGEFTKAKELGAIINLDDYTHIDFLKEECGIPETICCR 139

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN----------K 170
                V      + D     ++ G   +  I+   K +     +    +           
Sbjct: 140 YNPGGVYEVSNGIMDNPG-DAKYGFTKQQLIDGYKKLMELGAKNFGIHSFLVSNTVTNDY 198

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI- 229
                  + +   +        I +I+L GGI          +    + E   K   +I 
Sbjct: 199 YPALARTLFELAVELKNETNANITFINLSGGIGIPYLPEEKGNDIMVIGEGVRKAYEEIL 258

Query: 230 ----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA 279
                     + E G  ++     L T  +      K  + VD+     +   +      
Sbjct: 259 VPNGLGDVAIFTELGRYMLAPYAHLVTKAIHEKHIYKEYLGVDACAVNLMRPAMYGAYHH 318

Query: 280 TIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                           V G  C   D F        V +GD +   D   +       +N
Sbjct: 319 ITVLGKEETPLDTMYDVVGSLCENNDKFAIDRMLPKVDMGDYLVIHDTGAHGFAMGYNYN 378

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           G       +   D +++ IR   +  DY+ 
Sbjct: 379 GKLKSAELLLKEDDSVQLIRRAETPEDYFA 408


>gi|254975641|ref|ZP_05272113.1| diaminopimelate decarboxylase [Clostridium difficile QCD-66c26]
 gi|255093028|ref|ZP_05322506.1| diaminopimelate decarboxylase [Clostridium difficile CIP 107932]
 gi|255101185|ref|ZP_05330162.1| diaminopimelate decarboxylase [Clostridium difficile QCD-63q42]
 gi|255314770|ref|ZP_05356353.1| diaminopimelate decarboxylase [Clostridium difficile QCD-76w55]
 gi|255517445|ref|ZP_05385121.1| diaminopimelate decarboxylase [Clostridium difficile QCD-97b34]
 gi|255650555|ref|ZP_05397457.1| diaminopimelate decarboxylase [Clostridium difficile QCD-37x79]
 gi|260683653|ref|YP_003214938.1| diaminopimelate decarboxylase [Clostridium difficile CD196]
 gi|260687313|ref|YP_003218447.1| diaminopimelate decarboxylase [Clostridium difficile R20291]
 gi|306520503|ref|ZP_07406850.1| diaminopimelate decarboxylase [Clostridium difficile QCD-32g58]
 gi|260209816|emb|CBA63673.1| diaminopimelate decarboxylase [Clostridium difficile CD196]
 gi|260213330|emb|CBE04911.1| diaminopimelate decarboxylase [Clostridium difficile R20291]
          Length = 430

 Score =  193 bits (490), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 68/399 (17%), Positives = 123/399 (30%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           +TP Y+ D+  +  N    +   K      K+  A K F    M + +N+        S 
Sbjct: 29  QTPLYVFDEALVRQNCREYIEYFKAREGKNKVAYAGKAFLPLYMCNLINEEQMCLDVVSG 88

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+       F  E   ++   K  E   +         + +   +L+  +   +     
Sbjct: 89  GELYTAYKSNFPMEKVFFHGNNKTKEEINMGLDLGVGKFVVDNFYELDLLEALCEDKGKT 148

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           ++I  RI P +           +  S+ G            +   E +   + GL  H  
Sbjct: 149 QEIYFRITPGIEAHTHDYIKTGQIDSKFGFALVNGDLFRAIEKLSEYKNIKLVGLHAHIG 208

Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            +             M+  +++    F  Q+  I LGGG+     +       +   E  
Sbjct: 209 SQIFDVEPYIDTVDIMMNLVKEIKEKFNIQLTEIDLGGGVGVYYSEGDKPKTIKEFCETI 268

Query: 223 EKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
              +             + +EPG +IV N  +   TV  I +     V V     +  +V
Sbjct: 269 ITKAETSCKELGIEVPTLVIEPGRSIVANAGSTLYTVGSIKDIKDVRVYVSVDGGMTDNV 328

Query: 270 PDYLLYQESATIYPNTGPYTAM----VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L          N   + AM    + G+ C +GDI         +K GD +       
Sbjct: 329 RPSLYQASYECSIVNKINHEAMNHVTIAGKCCESGDILIGDINIMDIKSGDILITTSTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  + +N I    +            +  SY D   
Sbjct: 389 YGYSMSSNYNKIPRAAVVSVFDGNDKIICKRQSYEDLLA 427


>gi|262201840|ref|YP_003273048.1| diaminopimelate decarboxylase [Gordonia bronchialis DSM 43247]
 gi|262085187|gb|ACY21155.1| diaminopimelate decarboxylase [Gordonia bronchialis DSM 43247]
          Length = 473

 Score =  193 bits (490), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 58/406 (14%), Positives = 126/406 (31%), Gaps = 45/406 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +L+D+    +     +      G ++  A K F    +   +N+        S  E
Sbjct: 64  GTPVFLVDEADFRSRCADMMSAFGPYG-RVHYASKAFLCTEVARWVNEEGLSLDVCSGGE 122

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           + +     F  E  A +   K       A+ +    ++ ++  ++ +    A  + +   
Sbjct: 123 LAIALRAGFPPERIALHGNNKSVAELTAALDAGVGHVVLDSFVEIERLDALAGERGVVAD 182

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G         +  +    ++   + GL  H   +
Sbjct: 183 VLVRVTVGVEAHTHEFISTAHEDQKFGFALAGGVAMDAVRRVFATDNLRLVGLHSHIGSQ 242

Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F          +      F       +  + LGGG+  +            + E
Sbjct: 243 IFDMDGFELAAHRVLGLLHDVVAEFGVDKTAQMSIVDLGGGLGISYLPEERPLPVGTVAE 302

Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDS 263
              +               I +EPG AI    T     V  I +      +++  V VD 
Sbjct: 303 KLAEIVRRESSAVGLPMPTIAVEPGRAIAGPGTVTLYRVGTIKDVALGGGSVRRYVSVDG 362

Query: 264 SVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318
            +  ++   L   E      +         + V G+ C +GDI  +  +    ++ GD I
Sbjct: 363 GMSDNIRTVLYQAEYDVRLVSRVSTARAVVSRVVGKHCESGDIVIKDCWLPEDLEPGDLI 422

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +      Y  +  + +N    P +           +R  + +D+++
Sbjct: 423 AVAATGAYCYSMSSRYNMAMRPPVVAIADGADRMLLRRENIDDFFS 468


>gi|227547995|ref|ZP_03978044.1| diaminopimelate decarboxylase [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227079901|gb|EEI17864.1| diaminopimelate decarboxylase [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 448

 Score =  193 bits (490), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 51/403 (12%), Positives = 118/403 (29%), Gaps = 41/403 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP  ++D+    +               +  A K F    +   +++       +S  E
Sbjct: 38  GTPVMVVDEDDFRSRCRDMAAAFGAPE-NVHYASKAFLTRMIARWVDEEGLALDVASENE 96

Query: 63  VMLGHEK-FGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F  E    +   K      + +      ++ ++  +L +  D   +L  +++
Sbjct: 97  LRIALAANFPPERITVHGNNKSESFLTLCAEAGVGHVVIDSHQELAELNDVCGRLGTNQE 156

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168
           + +R+ P V          +    + G             D I +    ++GL  H   +
Sbjct: 157 VFVRVKPGVDAHTHEFVATSHEDQKFGLSLASGSAHKAAVDAIAAANLTLSGLHCHVGSQ 216

Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKD-----------YPVKD 213
                 F    +         +      ++++ LGGG      D             +  
Sbjct: 217 VFDAEGFKLAAERVLGLYATIYRENGVALDYLDLGGGYGIAYVDSEQALDVTGVARDLLS 276

Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS------VEA 267
              ++       +  + +EPG AI   +T        I E   +             +  
Sbjct: 277 SVDQVAAELGIPAPTVVVEPGRAIAGPSTVTVYRAGTIKEVHTSHTTTRRYIAVDGGMSD 336

Query: 268 HVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDI-FGEFHFEKPVKIGDRISFED 322
           ++   L            + +       + G  C +GDI  G+  + + +  GD I+   
Sbjct: 337 NIRPALYDSAYDGRVVNRFVDAPETETRLVGSHCESGDILIGDALWPEDIATGDLIALAA 396

Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              Y     + +N    P +           ++  + +D    
Sbjct: 397 TGAYCYAMSSNYNAFGRPAVVAVRAGNIAPMLKRETVDDLLAR 439


>gi|293364735|ref|ZP_06611452.1| diaminopimelate decarboxylase [Streptococcus oralis ATCC 35037]
 gi|291316185|gb|EFE56621.1| diaminopimelate decarboxylase [Streptococcus oralis ATCC 35037]
          Length = 420

 Score =  193 bits (490), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 61/392 (15%), Positives = 116/392 (29%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   SS  
Sbjct: 21  PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILKEEGCGVDCSSYV 80

Query: 62  EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++ H+  F G    ++     D E         TI  +    +   +  A        
Sbjct: 81  ELLMSHKLDFPGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERAAGIPEIISC 140

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169
                 V      + D     ++ G       E+         +   ++  L  +     
Sbjct: 141 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 199

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                   + +   +        +++I+L GGI    +     +    + E   K   + 
Sbjct: 200 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEPNDIAVIGEGVRKVYEEV 259

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     I+ E G  ++     L T V    +  +  + VD+S    +   +     
Sbjct: 260 LTPAGLGQVKIFTELGRFMLAPHGALVTRVTHKKKTYRTYLGVDASAVNLMRPAMYGAYH 319

Query: 279 A--TIYPNTGPYTA-MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
               +    GP     V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 320 HITNLTHPDGPVEVVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 379

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                   +   +G  + IR      DY+  L
Sbjct: 380 AKLRSAEILYTEEGKTRQIRRAERPEDYFATL 411


>gi|325002813|ref|ZP_08123925.1| diaminopimelate decarboxylase [Pseudonocardia sp. P1]
          Length = 484

 Score =  193 bits (490), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 59/419 (14%), Positives = 123/419 (29%), Gaps = 59/419 (14%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +++D+    +           +   +  A K F    +   + Q        S  E
Sbjct: 65  GTPLFVLDEADFRSRCAEFAAAFGASA--VHYAAKAFLCTEVARWVAQEGLSLDVCSGGE 122

Query: 63  VMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           + +     F     A +   K       AV +    ++ ++  ++ + +  A  + +   
Sbjct: 123 LAVALRAGFPPPRIALHGNNKSVPELAAAVDAGVGGVVVDSFDEIARLEAVAAERGVTAP 182

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG----------------EKCKDKIESEIKNVNGL 161
           + +R+   V               + G                E  +  + +    + GL
Sbjct: 183 VLIRLTVGVEAHTHEYIATAHEDQKFGFSIAAGSAGEKDSAAIEAARRVVAARHLELVGL 242

Query: 162 MFHNNCENKSFLCFSAMLKNIEKEFG--------HFITQIEWISLGGGIHFTDKD----Y 209
             H   +      F A  + + K             +  +  + LGGGI    +      
Sbjct: 243 HSHIGSQIFDTEGFEAAARRVVKVLADLHAEHGTENLAALRTLDLGGGIGIAYRPGEVPL 302

Query: 210 PVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISE-----NIKN 257
            +    + L+   ++           I +EPG AI    T     V  I +       + 
Sbjct: 303 SMPALAEELRAIVKRECAASGLDVPAIAVEPGRAIAGPGTVTVYEVGTIKDVPLGGYSRR 362

Query: 258 LVIVDSSVEAHVPDYLLYQESAT-----------IYPNTGPYTAMVCGRSCLAGDIFGEF 306
            V VD  +  ++   L   E              +     P  + V G+ C +GDI    
Sbjct: 363 YVSVDGGMSDNIRTSLYDAEYDVRLVSRSSERDSVPGGDEPVLSRVVGKHCESGDIVVRD 422

Query: 307 HFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            +    +  GD ++      Y     + +N +  P +           +R  +  D + 
Sbjct: 423 CWLPADLAPGDLLAVAATGAYCYAMASGYNRLPRPAVVAVREGADRTLLRRETLEDQFR 481


>gi|258652304|ref|YP_003201460.1| diaminopimelate decarboxylase [Nakamurella multipartita DSM 44233]
 gi|258555529|gb|ACV78471.1| diaminopimelate decarboxylase [Nakamurella multipartita DSM 44233]
          Length = 484

 Score =  193 bits (490), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 64/419 (15%), Positives = 120/419 (28%), Gaps = 60/419 (14%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP  +ID+    +           A   +  A K F    +   L          +  E
Sbjct: 61  GTPLMVIDEADFRSRCQDFADAFGGA-ASVHYAGKAFLCSEIVRWLADEGLSLDVCTSGE 119

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL---HK 116
           + L     F  E  A + + K     A+        I+ ++  ++ +     +       
Sbjct: 120 LRLALRAGFPPERIALHGSNKSDAELAMAVQHRIGAIVVDSFHEIARLAGLVEDRASDPV 179

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNC 167
            + +R+   V               + G         E  +  +      + GL  H   
Sbjct: 180 PVMIRVTVGVEAHTHEFIATAHEDQKFGFSLTGGDAAEAARRVLALSGLRLIGLHSHIGS 239

Query: 168 ENKSFLCFSAMLKN-------IEKEFGHFITQIEWISLGGGIHFTDKDYPVK-----DFC 215
           +      F             I +EF      I  + LGGG+                  
Sbjct: 240 QIFDPSGFEVAAHRVVGLLRTIVEEFPAAADTITTLDLGGGLGIAYTSDDDPPAPDVMAK 299

Query: 216 QRLKEFSEKYS------VQIYLEPGEAIVTNTTTLNTTVLDISENI------KNLVIVDS 263
             ++  + +          + +EPG AI    T     V  I +        +  V VD 
Sbjct: 300 SLIEIVTRECQLAGLTVPAVMVEPGRAIAGPGTVTLYEVGTIKDVTLDGGLTRRYVSVDG 359

Query: 264 SVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRI 318
            +  ++   L   E     A+   +  P  + V G+ C +GDI     +    + IGD +
Sbjct: 360 GMSDNIRTALYDAEYTVTLASRSSDATPVLSRVVGKHCESGDIVVRECYLPADLAIGDLL 419

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGT---------------IKAIREFSYNDY 362
           +      Y     + +N +  P +   +  GT                  +R  + +D 
Sbjct: 420 AVAATGAYCYAMSSNYNRVPRPAVVAVSGQGTGGSAGTDGAAGGATDRVVLRRETDDDL 478


>gi|315103517|gb|EFT75493.1| diaminopimelate decarboxylase [Propionibacterium acnes HL050PA2]
          Length = 476

 Score =  193 bits (490), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 65/399 (16%), Positives = 128/399 (32%), Gaps = 43/399 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y++D+  L                 +  A K F    +   ++Q      + +  E
Sbjct: 63  GSPLYVLDESDLRQRARAFRDAFSEWD--VYYAGKAFLTRTIASWIDQEGLFLDTCTGGE 120

Query: 63  VMLGHEK-FGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117
           ++   +          +   K  D    A+      II +++ ++ + +   ++   H +
Sbjct: 121 LITALQGGMDPARIGLHGNNKSIDELKLALSVGVGRIIVDSLDEIMRIEQLCRENGWHAR 180

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G                 S+  ++ G+  H   +
Sbjct: 181 VMVRVTAGVEAHTHEYIATAHEDQKFGFSITNGAAMVAMVRCHTSDAIDLLGVHSHIGSQ 240

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F       +K +E+      + +  + LGGG              + L     +
Sbjct: 241 IFDTAGFEVAARRTMKLLEQFHQATGSALPELDLGGGFGIAYTSQDSPATVESLAGALRE 300

Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDSSVEA 267
                          I LEPG AIV  TT    TV  +          +  V VD  +  
Sbjct: 301 IVTVEARGRGMEVPHISLEPGRAIVGPTTMALYTVGTVKPVDLDTGAQRMYVSVDGGMSD 360

Query: 268 HVPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFED 322
           ++   L   E + +  N      P    + G+ C AGDI     +    V  GD I+   
Sbjct: 361 NIRPALYAAEYSAVIANRTSEVAPVLCRIVGKHCEAGDILVRDVYLPGDVSPGDVIAVPG 420

Query: 323 VAGYNINRKNWFNGINMPTIAVKNVD-GTIKAIREFSYN 360
              Y+ +  + +N +  P +   N D G +  +R  + +
Sbjct: 421 AGAYSRSMASNYNHVPRPAVVSVNEDRGVLVLLRRENID 459


>gi|314923475|gb|EFS87306.1| diaminopimelate decarboxylase [Propionibacterium acnes HL001PA1]
 gi|314966518|gb|EFT10617.1| diaminopimelate decarboxylase [Propionibacterium acnes HL082PA2]
 gi|315092962|gb|EFT64938.1| diaminopimelate decarboxylase [Propionibacterium acnes HL060PA1]
 gi|327327343|gb|EGE69119.1| diaminopimelate decarboxylase [Propionibacterium acnes HL103PA1]
          Length = 476

 Score =  193 bits (490), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 65/399 (16%), Positives = 128/399 (32%), Gaps = 43/399 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y++D+  L                 +  A K F    +   ++Q      + +  E
Sbjct: 63  GSPLYVLDESDLRQRARAFRDAFSEWD--VYYAGKAFLTRTIASWIDQEGLFLDTCTGGE 120

Query: 63  VMLGHEK-FGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117
           ++   +          +   K  D    A+      II +++ ++ + +   ++   H +
Sbjct: 121 LITALQGGMDPARIGLHGNNKSIDELKLALSVGVGRIIVDSLDEIMRIEQLCRENGWHAR 180

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G                 S+  ++ G+  H   +
Sbjct: 181 VMVRVTAGVEAHTHEYIATAHEDQKFGFSITNGAAMVAMVRCHTSDAIDLLGVHSHIGSQ 240

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F       +K +E+      + +  + LGGG              + L     +
Sbjct: 241 IFDTAGFEVAARRTMKLLEQFHQATGSALPELDLGGGFGIAYTSQDSPATVESLAGALRE 300

Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDSSVEA 267
                          I LEPG AIV  TT    TV  +          +  V VD  +  
Sbjct: 301 IVTVEARGRGMEVPHISLEPGRAIVGPTTMALYTVGTVKPVDLDTGAQRMYVSVDGGMSD 360

Query: 268 HVPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFED 322
           ++   L   E + +  N      P    + G+ C AGDI     +    V  GD I+   
Sbjct: 361 NIRPALYAAEYSAVIANRTSEVAPVLCRIVGKHCEAGDILVRDVYLPGDVSPGDVIAVPG 420

Query: 323 VAGYNINRKNWFNGINMPTIAVKNVD-GTIKAIREFSYN 360
              Y+ +  + +N +  P +   N D G +  +R  + +
Sbjct: 421 AGAYSRSMASNYNHVPRPAVVSVNEDRGVLVLLRRENID 459


>gi|315650185|ref|ZP_07903260.1| diaminopimelate decarboxylase [Eubacterium saburreum DSM 3986]
 gi|315487542|gb|EFU77850.1| diaminopimelate decarboxylase [Eubacterium saburreum DSM 3986]
          Length = 423

 Score =  193 bits (489), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 66/391 (16%), Positives = 121/391 (30%), Gaps = 29/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+++ D++ +  N          N G K   A+K      + + L +Y  G   SS+ 
Sbjct: 20  PTPWHIYDEKGIRENAKRLNEAFGWNKGFKEYFAVKATPNPFIMNILKEYGCGVDCSSMV 79

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+ +     F G+   ++      E           I  + ++ +   ++   KL K + 
Sbjct: 80  ELEMSDACGFSGKDIMFSSNETPIEEFKFANDLGAIINLDDITHIKYVEEVCGKLPKTMC 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFH------NNCEN 169
            R NP   ++       N   ++ G      IE+      K V     H           
Sbjct: 140 ARYNPGGVFTMSNGIMDNPGDAKYGMTPDQLIEAFKIMQSKGVKHFGIHAFLASNTVTNE 199

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK----- 224
                   + +   +        +E+I+L GGI          +    +    +K     
Sbjct: 200 YYPKLARELFEFAVRIKNETGINVEFINLSGGIGIPYTPDSEPNDIFEISNGVKKAYEEV 259

Query: 225 ------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                   V I+ E G  ++     L T  +      K+ + VD+     +   +     
Sbjct: 260 LEANAIMDVAIFTELGRYMLAPYGALITEAIHEKNIYKHYIGVDACASNLMRPAMYGAYH 319

Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                            V G  C   D F        ++ GD I   D   +       +
Sbjct: 320 HLTVLGKENEKASEVYDVVGSLCENNDKFAIDRKLPKIEKGDYIYIHDTGAHGFAMGYNY 379

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   DG++K IR   +  DY+ 
Sbjct: 380 NGKLRSAELLLQEDGSVKMIRRAETDKDYFA 410


>gi|330792841|ref|XP_003284495.1| hypothetical protein DICPUDRAFT_45522 [Dictyostelium purpureum]
 gi|325085525|gb|EGC38930.1| hypothetical protein DICPUDRAFT_45522 [Dictyostelium purpureum]
          Length = 423

 Score =  193 bits (489), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 62/396 (15%), Positives = 113/396 (28%), Gaps = 30/396 (7%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQY-MDGTTS 57
           +  TP++  +  K++ N  + +   +      K   A+K      +   L +    G   
Sbjct: 26  LYPTPFHFYNGDKIVENGKSLMTNFQQYFPNYKNYFAVKATPNPSILKILKEQTGMGVDC 85

Query: 58  SSLYEVMLG-HEKFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           SSL E++L     F GE   +     K+ E          I  + ++Q+         + 
Sbjct: 86  SSLAELLLSEKVGFKGEEIMFTSNNTKENEYKKAYELGAIINLDDITQIEYLYSSLGNVM 145

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCEN 169
            ++                  N   ++ G    D   +  K         GL        
Sbjct: 146 PELLSFRYNPGPLKSGNDIIGNPKDAKFGLTGDDLQNAYNKAKELGVKRFGLHCMVASNE 205

Query: 170 KSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
                F    + +             Q E ++LGGGI    + + V    Q+L E   K 
Sbjct: 206 LDIDYFEETARLLFSTVATLSKQCGIQFEMVNLGGGIGIPYRPHQVAVNYQKLTERIYKA 265

Query: 226 SVQIYL-----------EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLL 274
             ++ L           E G  I      L T  +      K  + VD+ +   +   + 
Sbjct: 266 YKELILDAGLPQMNVVTECGRVITGPYGALITRAIHSKSTYKEYIGVDACMADLMRPGMY 325

Query: 275 YQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                    +           + G  C   D F        +   D I   D   +  + 
Sbjct: 326 NAYHHVTVIDPKDPSKLKQYDLVGSLCENNDKFCVDRTLPEINRNDLIVIHDSGAHGHSM 385

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366
              +NG       +   +      R  +Y D +  L
Sbjct: 386 GFNYNGKLRSAEYLLLNNEIKLIRRAETYEDLFATL 421


>gi|329122097|ref|ZP_08250705.1| diaminopimelate decarboxylase [Dialister micraerophilus DSM 19965]
 gi|327466904|gb|EGF12420.1| diaminopimelate decarboxylase [Dialister micraerophilus DSM 19965]
          Length = 415

 Score =  193 bits (489), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 64/391 (16%), Positives = 121/391 (30%), Gaps = 28/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+Y+ D++ + +N++         +      A+K      +   L+    G   SS+ 
Sbjct: 21  GTPFYIYDQKGIEDNINNFKKSFSWCSNFYKYFAVKATPNPWILKLLHNMGIGADCSSMA 80

Query: 62  EVMLGHE-KFGGETHAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E++L       G+   ++     D E     S    I  + +S     +   + + +KI 
Sbjct: 81  ELILAEAVGLKGKEIVFSSNNTADEEFIKANSLGAIINLDDISMFGDLERL-KIIPEKIS 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS-------- 171
            R NP    S           ++ G   +  +ES        +                 
Sbjct: 140 FRYNPGNKVSIGNNFIGKPEDAKYGMTKEQLLESVQIAKKLKIPFIGIHTMIVSSELTLD 199

Query: 172 --FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
                   + +   +    F   +++I  GGGI               L + + +    +
Sbjct: 200 VLIANIRMLFELAIEIREKFNVIVDFIDFGGGIGIPYHPDDRAVNLFELGKRTHELFKSM 259

Query: 230 Y---------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280
                      E G AI      L T V+      K  + VD+ +   +   +       
Sbjct: 260 MSGFEKTQLSFECGRAITGPYGYLVTKVIHHKNIYKKYIGVDACMADLMRPGIYGAYHEI 319

Query: 281 IYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
              +           + G  C   D F        +  GD I   D   +  +    +NG
Sbjct: 320 TVCSKEDTNETQIYDIVGSLCENNDKFAINRKLPKILKGDLIVIHDTGAHGHSMGFNYNG 379

Query: 337 INMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                  + + DGTI+ IR   + ND ++ L
Sbjct: 380 KLRHQELLLHSDGTIQKIRRNETLNDLFSTL 410


>gi|302385100|ref|YP_003820922.1| Orn/DAP/Arg decarboxylase 2 [Clostridium saccharolyticum WM1]
 gi|302195728|gb|ADL03299.1| Orn/DAP/Arg decarboxylase 2 [Clostridium saccharolyticum WM1]
          Length = 423

 Score =  193 bits (489), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 65/391 (16%), Positives = 120/391 (30%), Gaps = 29/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +  N          N G +   A+K      + + L  Y  G   SS+ 
Sbjct: 20  PTPFHLYDEKGIRENARKLKDAFSWNKGYREYFAVKATPNPFILNILKDYGCGADCSSMT 79

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+M+     F G    ++       E          I  + ++ +   K     + + I 
Sbjct: 80  ELMMSDSLGFSGSDIMFSSNNTPAEEFQYADKIGGIINLDDITHIEYLKKAIGHIPETIS 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169
            R NP   +        N   S+ G   +   E+         +   ++  L  +     
Sbjct: 140 CRYNPGGIFKISNDIMDNPGDSKYGMTTEQMFEAFRILKSNGAKHFGIHAFLASNTVTNE 199

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
              L    + +   K        I +I+L GGI    +     +  + + E   +   +I
Sbjct: 200 YYPLLAKVLFELAVKLKKETGAHISFINLSGGIGIPYRPGQEPNDIKAIGEGVREVYEEI 259

Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                      Y E G  ++     L T  +      K  V VD+     +   +     
Sbjct: 260 LVPEGMGDVAIYTELGRFMLGPYGGLVTRAIHEKHTHKEYVGVDACAVNLMRPAMYGAYH 319

Query: 279 ATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        +  GD +   D   +       +
Sbjct: 320 HITVMGKEGEVCSHKYDVVGSLCENNDKFAIDRMLPEISRGDLLFIHDTGAHGYAMGYNY 379

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   DG+++ IR   +  DY+ 
Sbjct: 380 NGKLKSAELLLKEDGSVQMIRRAETPRDYFA 410


>gi|156932679|ref|YP_001436595.1| diaminopimelate decarboxylase [Cronobacter sakazakii ATCC BAA-894]
 gi|156530933|gb|ABU75759.1| hypothetical protein ESA_00463 [Cronobacter sakazakii ATCC BAA-894]
          Length = 420

 Score =  193 bits (489), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 52/398 (13%), Positives = 111/398 (27%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +D            +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRAQIDRLRQFDV-----IRFAQKACSNIHILRLMREAGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-AQKLHKKI 118
                        +   +     D    A +      +      ++      A     ++
Sbjct: 82  RAIAAGYDPRQNPDDIVFTADVLDDATIARVHELG--VPVNAGSVDMLAQLGAVSPGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172
            LRINP   +      +     S+ G    D   +          + G+  H        
Sbjct: 140 WLRINPGFGHGHSQKTNTGGENSKHGIWYSDLPTALAVMQRYQLKLVGMHMHIGSGVDYG 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-------- 224
                    + +    F   +E IS GGG+    ++               +        
Sbjct: 200 HLERVCGAMVSQVI-EFGQDLEAISAGGGLSIPYREGDETIDTDHYFGLWNRAREQIAAH 258

Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + +++ +EPG  +V     L   V  +     ++ V++D+     +   +        
Sbjct: 259 FGHPIKLEIEPGRFLVAEAGVLVAQVRSVKEMGSRHFVLIDAGFNDLMRPSMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     +      +V G  C +GD+F        E      V+ GD +   D   Y
Sbjct: 319 ALAADGRDLRDAPLMETVVAGPLCESGDVFTQQEGGKVETRALPAVRPGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    +          R  + ++   
Sbjct: 379 GASMSSNYNSRPLLPEVLLENGEARTIRRRQTIDELLA 416


>gi|331265652|ref|YP_004325282.1| diaminopimelate decarboxylase [Streptococcus oralis Uo5]
 gi|326682324|emb|CBY99941.1| diaminopimelate decarboxylase [Streptococcus oralis Uo5]
          Length = 418

 Score =  193 bits (489), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 61/392 (15%), Positives = 116/392 (29%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   SS  
Sbjct: 19  PTPFHLYDEKGIREKARAVNRAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78

Query: 62  EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++ H+  F G    ++     D E         TI  +    +   +  A        
Sbjct: 79  ELLMSHKLDFPGSEIMFSSNNTPDKEYAYAHELGATINLDAFEDIEHLERAAGIPKIISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169
                 V      + D     ++ G       E+         +   ++  L  +     
Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAVLKEKGAKTFGIHSFLASNTVTHL 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                   + +   +        +++I+L GGI    +     +    + E   K   + 
Sbjct: 198 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEPNDIAVIGEGVRKVYEEV 257

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     I+ E G  ++     L T V    +  +  + VD+S    +   +     
Sbjct: 258 LTPAGLGQVKIFTELGRFMLAPHGALVTRVTHKKKTYRTYLGVDASAVNLMRPAMYGAYH 317

Query: 279 A--TIYPNTGPYTA-MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
               +    GP     V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HITNLTHPDGPVEVVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                   +   +G  + IR      DY+  L
Sbjct: 378 AKLRSAEILYTEEGKTRQIRRAERPEDYFATL 409


>gi|78779484|ref|YP_397596.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT
           9312]
 gi|78712983|gb|ABB50160.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. MIT
           9312]
          Length = 457

 Score =  193 bits (489), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 55/397 (13%), Positives = 119/397 (29%), Gaps = 35/397 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P Y++D+  L N+        +         + A K  ++  M + ++    G  + S
Sbjct: 49  DSPLYILDEITLRNSCRAYKNALEKYYPGKSLPIYASKANSSIFMSNLVSSEGLGLDAVS 108

Query: 60  LYEVMLGHEK-FGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             E++   +     E   ++     D EI+  + N   +I +    L + +  +   ++ 
Sbjct: 109 EGELLTALKGGVPNEKIVFHGNNKSDKEIEFAVRNNIQVIVDNDYDLERLEGISNSFNRD 168

Query: 118 IGLRIN--PSVSYSKFILADPNRPFSRLG-------EKCKDKIESEIKNVNGLMFHNNCE 168
           + + I   P +              S+ G               ++   + GL  H   +
Sbjct: 169 LEIMIRFTPGIECHTHEYIRTGSFDSKFGFGIEYLNILFDRINNTKHLKLKGLHAHIGSQ 228

Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEF---- 221
                    + + +         F   I+ ++LGGG+     +           +     
Sbjct: 229 IFELDPHKDLGEIMVNVILDAKKFGHNIQKLNLGGGLGIKYTENDDPPSIDEWVKTISTS 288

Query: 222 ----SEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDY 272
                +K++     +  EPG +IV+        +    E         VD  +  +    
Sbjct: 289 VVKACKKHNLDLPTLMCEPGRSIVSTAGITIYKIGAFKEIPGIRTYLSVDGGMSDNPRPI 348

Query: 273 LLYQESATIY-----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
                 +                 + G+ C +GD+  +       K GD I       YN
Sbjct: 349 TYQSNYSACLVSNPFNINSKNKYTIAGKHCESGDVLFKEIELADCKTGDLICVFGTGAYN 408

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            +  + +N I  P   +          +  S  D   
Sbjct: 409 NSMSSNYNRIPRPAALLVCNGEAEIIQKRESPFDLLK 445


>gi|255010466|ref|ZP_05282592.1| diaminopimelate decarboxylase [Bacteroides fragilis 3_1_12]
 gi|313148271|ref|ZP_07810464.1| diaminopimelate decarboxylase [Bacteroides fragilis 3_1_12]
 gi|313137038|gb|EFR54398.1| diaminopimelate decarboxylase [Bacteroides fragilis 3_1_12]
          Length = 387

 Score =  193 bits (489), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 64/367 (17%), Positives = 121/367 (32%), Gaps = 27/367 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           ++TP+Y  D + L + L      + +     +  A+K  A   +   + +   G    S 
Sbjct: 13  LQTPFYYYDTKVLRDTLACVNREVARYDNFSVHYAVKANANSKVLTIIRESGLGADCVSG 72

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115
            E+       F      +    K      +  + D   FN  +V +L    + A  +   
Sbjct: 73  GEIRAAIKAGFPAGKIVFAGVGKADWEINLGLDYDIFCFNVESVPELEVINELAAAKGKV 132

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168
             +  RINP+V              ++ G    D        +  +     GL FH   +
Sbjct: 133 ANVAFRINPNVGAHTHANITTGLAENKFGISMHDMDKVIDVALGMKNVKFIGLHFHIGSQ 192

Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFS 222
                 F+     +  ++ +       +E I++GGG+         +   DF    + + 
Sbjct: 193 ILDMGDFIALCNRVNELQDKLEARHILVEHINVGGGLGIDYDHPNRQAIPDFADYFRTYD 252

Query: 223 EKY----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQE 277
           E         ++ E G AI     +L + VL + +       + D+ +   +   L    
Sbjct: 253 EHLKLRPHQTLHFELGRAITGQCGSLISKVLYVKQGTNKQFAILDAGMTDLIRPALYQAH 312

Query: 278 SATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                  +      T  V G  C + D+FG+      VK GD I+      Y     + +
Sbjct: 313 HKMENLTSEDTTVETYDVVGPICESSDVFGKAVDLNKVKRGDLIALRSAGAYGEIMASGY 372

Query: 335 NGINMPT 341
           N   +P 
Sbjct: 373 NCRELPK 379


>gi|145222885|ref|YP_001133563.1| diaminopimelate decarboxylase [Mycobacterium gilvum PYR-GCK]
 gi|145215371|gb|ABP44775.1| diaminopimelate decarboxylase [Mycobacterium gilvum PYR-GCK]
          Length = 472

 Score =  192 bits (488), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 55/406 (13%), Positives = 118/406 (29%), Gaps = 45/406 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ID+    +            G  +  A K F    +   +++       ++  E
Sbjct: 64  GTPVFVIDEADFRSRCRDISSAFGG-GEYVHYAAKAFLCGEIARWVDEEGLSLDVATGGE 122

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           + +     F  E    +   K       AV      ++ +++ ++ +    A    + + 
Sbjct: 123 LAVALHAGFPAERITVHGNNKSVAELTAAVKHGVGHVVVDSMIEIERLDRIAADNGVVQD 182

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G         E  +   E+    + GL  H   +
Sbjct: 183 VLVRVTVGVEAHTHEFISTAHEDQKFGLSLASGAAMEAVRRVFEAGNLRLVGLHSHIGSQ 242

Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F          +      F  +    ++ + LGGG+  +            L  
Sbjct: 243 IFDVAGFEIAAHRVIGLLRDVVAEFGVEKTSQMDIVDLGGGLGISYLPDDNPPPMSELAA 302

Query: 221 FSEKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS----- 264
                             ++ +EPG AI    T     V  + +   +            
Sbjct: 303 KLRAIVARESAAVGLPAPKLVVEPGRAIAGPGTITLYEVGTVKDVAVSPTSHRRYVSVDG 362

Query: 265 -VEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318
            +  ++   L   E      +   +  P  + V G+ C +GDI     +    V+ GD +
Sbjct: 363 GMSDNIRTSLYGAEYDVRLLSRVSDATPTLSRVVGKHCESGDIVVRDAWLSEDVRPGDLL 422

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
                  Y  +  + +N I  P +           +R  +  D  +
Sbjct: 423 GVAATGAYCYSMSSRYNLIGRPAVVAVRDGRARLILRRETVEDLLS 468


>gi|330996966|ref|ZP_08320831.1| diaminopimelate decarboxylase [Paraprevotella xylaniphila YIT
           11841]
 gi|329572040|gb|EGG53711.1| diaminopimelate decarboxylase [Paraprevotella xylaniphila YIT
           11841]
          Length = 386

 Score =  192 bits (488), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 66/366 (18%), Positives = 118/366 (32%), Gaps = 26/366 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTAL-YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           ++TP+Y  D + L   LDT      KN    +  A+K  A   +   +     G    S 
Sbjct: 13  VRTPFYYYDTELLRKTLDTIKSETGKNDNYHVHYAVKANANRKLLRIICAAGFGADCVSG 72

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  +   +    K      V  +         ++ +L      A +  K 
Sbjct: 73  GEIKACLDAGFPADKIVFAGVGKSDWEINVGLDAGIAYFNVESLPELEVINQLAGEKDKI 132

Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168
                RINP V              ++ G    D           +     GL FH   +
Sbjct: 133 ARVSFRINPDVGAHTHANITTGLAENKFGIAMADMEKVIEIAASLKHVEFVGLHFHIGSQ 192

Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFS 222
                 F+     +  ++         ++ I++GGG+    +     PV  F    + + 
Sbjct: 193 ILEMGDFVALCNRVNELQDRLERHHITVKNINVGGGLGIDYQHPNEVPVPHFADYFQTYR 252

Query: 223 EKYS----VQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQE 277
           +        Q++ E G A+V    +L T VL + +   K   IVD+ +   +   L    
Sbjct: 253 KHLHLRPDQQLHFELGRAVVGQCGSLITRVLYVKQATYKQFAIVDAGMTDLIRPALYQAF 312

Query: 278 S--ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                +  +    T  V G  C + D+F +         GD ++      Y     + +N
Sbjct: 313 HSIENLSSDERKETYDVVGPICESSDVFVKAFDLNRCHRGDLLALRSAGAYGEIMASRYN 372

Query: 336 GINMPT 341
              +P 
Sbjct: 373 CRELPA 378


>gi|315452641|ref|YP_004072911.1| putative Pyridoxal-dependent decarboxylase, NspC [Helicobacter
           felis ATCC 49179]
 gi|315131693|emb|CBY82321.1| putative Pyridoxal-dependent decarboxylase, NspC [Helicobacter
           felis ATCC 49179]
          Length = 400

 Score =  192 bits (488), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 121/395 (30%), Positives = 197/395 (49%), Gaps = 33/395 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I +P Y+++  KL +NL      ++ A VK+LLALK FA W  F+ +   + G  +S ++
Sbjct: 7   IPSPCYVLELAKLQHNLAILERAQREAQVKILLALKGFAFWRSFEWVRSSLYGCCASGVH 66

Query: 62  EVMLGHEKFG-----GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
           E +L +E+FG      E   ++  YK  ++  +L     IIFN+ +Q + +KD  Q  +K
Sbjct: 67  EALLAYEEFGSRESGKEICVFSPGYKAEDMAQLLPIATHIIFNSFAQYHTYKDSIQAKNK 126

Query: 117 K----------IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVNGLM 162
           K          +GLRINP  S  + ++ +P  P SRLG       +   +     ++GL 
Sbjct: 127 KLEKLGLSPLKVGLRINPLFSRVQPMIYNPCAPHSRLGIAPAAFKQGMQQYGLEGISGLH 186

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
           FH +CE  +      +    +  FG  I  +EW++ GGG H T + Y ++   Q ++ F 
Sbjct: 187 FHTHCEQDAPALQETLGHVQKH-FGFAIENMEWMNFGGGQHITKEGYLLEVLSQAVRAFR 245

Query: 223 EKYS--VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280
             Y     I+LEPGEA+   +  L  +V+DI EN   + I+D S+  H+PD L       
Sbjct: 246 ASYPNIQDIFLEPGEAVGWQSGFLLASVVDIVENEGRVAILDVSITNHMPDCLEMPYRPE 305

Query: 281 IYPNTGPYT----------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
           +                    + G SCLAGD  G + FE P+++GDR+ F+D+  Y+I +
Sbjct: 306 VLHVDKNGKTQPELERGLAYYLGGASCLAGDYIGPYTFENPLEVGDRLLFQDMLHYSIVK 365

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            N FNG+ +P++ +    G  K ++ F Y  Y + 
Sbjct: 366 NNTFNGVALPSLGLIVNGG-FKLLKSFEYAHYKDR 399


>gi|126640100|ref|YP_001083087.1| diaminopimelate decarboxylase [Acinetobacter baumannii ATCC 17978]
 gi|126373831|gb|ABO13852.1| YPPCP.09C-like protein [Acinetobacter baumannii ATCC 17978]
          Length = 416

 Score =  192 bits (488), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 58/402 (14%), Positives = 119/402 (29%), Gaps = 48/402 (11%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP ++ D   +   +           V +  A K  +   +   + +      S SL E+
Sbjct: 18  TPLWIYDADTITRQIAALQ----LFDV-VRFAQKANSNTHILRLMKRQGVVVDSVSLGEI 72

Query: 64  MLGHE-KFGG------ETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLH 115
                  F            +     D    A +   +  +   ++  L++    A    
Sbjct: 73  ERALASGFTPGLHNGHADIVFTADLLDRATLARVVELNIPVNCGSMDMLDQLG--AVNPG 130

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCEN 169
             + LRINP   +      +     S+ G    D + +  K       ++GL  H     
Sbjct: 131 HPVWLRINPGFGHGHSKKTNTGGEHSKHGIWHGDLVRACEKIKSNSLTLHGLHMHIGSGV 190

Query: 170 KSFLCFSAMLKNIE--KEFGHFITQIEWISLGGGIHFTDKD-YPVKDFCQRLKEF----- 221
                       ++  +        +  IS GGG+    +   P  D       +     
Sbjct: 191 DYTHLQEVCGAMLKLVEVVNAQGLDLHAISAGGGLSVPYQTGEPTIDIAHYFSLWNAARH 250

Query: 222 ----SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQ 276
                 ++ V++ +EPG  ++  +  L T V    +   N   +VD+     V   L   
Sbjct: 251 AVEQLLEHPVKLEIEPGRYLMAESGVLVTEVRATKQQGANHFLMVDAGFNDLVRPALYGA 310

Query: 277 ESATIYPNTG-------PYTAMVCGRSCLAGDIFGE-------FHFEKPVKIGDRISFED 322
                  ++         +  +V G  C +GD+F +              ++GD +   D
Sbjct: 311 YHGMELIHSDGTAVNGLQFDTVVAGPLCESGDVFTQGDGGVVLHRSLPQAQVGDLLVLHD 370

Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              Y  +  + +N   +    +          R  +  +   
Sbjct: 371 TGAYGASMSSNYNARPLIAEVLMENGEPRLIRRRQTVAELLA 412


>gi|289583356|ref|YP_003481766.1| diaminopimelate decarboxylase [Natrialba magadii ATCC 43099]
 gi|289532854|gb|ADD07204.1| diaminopimelate decarboxylase [Natrialba magadii ATCC 43099]
          Length = 457

 Score =  192 bits (488), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 59/393 (15%), Positives = 126/393 (32%), Gaps = 31/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P Y+  +  + +N  T             +  A+K      +   L          + 
Sbjct: 49  DSPVYVFYEDDIRDNYRTLRSALDEHYPDSTIHFAVKANYNPAILSILRDEGCHAEVYAR 108

Query: 61  YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       +  +           +    A+ +     + +  ++L +    A+K   +
Sbjct: 109 GELAAAQTAGYDADDLLLTGMNRRPEDIERALETGVGHFLVDNATELERLVAAARKTDVR 168

Query: 118 IGLRINPSVSY--SKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
             + I  + S               ++ G            +  + +E  ++ G+  H  
Sbjct: 169 PRVLIRCNPSMEVPTHPEVATATLETKFGLDIDSGRAMAVTEKAVAAEEIDLAGIQLHIG 228

Query: 167 CENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY--PVKDFCQRLKE 220
            + +S   +      M             +I+ + LGGG+     D     +   + +  
Sbjct: 229 SQIQSAEPYGVAARDMCAFAVDIRDELGVEIDVLDLGGGLPVPYDDDVPAPETIIETIAT 288

Query: 221 FSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL 273
             +            ++LEPG  +V N  TL   V  + E       V  +    V  Y 
Sbjct: 289 NVKDSLSATDMSLPTLFLEPGRRLVGNAGTLLARVGVVKETPYATFAVLDAGTNTVSSYW 348

Query: 274 LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
            Y   A +       +  + G  C +GD+  E     P++ GD I+ + +  Y++   + 
Sbjct: 349 PYPIYA-LSEAEPTESYHLAGPLCYSGDVLAEDVSLPPLERGDTIAIDRIGAYSLGSASH 407

Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNN 365
            N    P I +   +G ++ IR+  S  +   N
Sbjct: 408 TNAQPKPPIVLLRSNGDVETIRQPESVEEIIGN 440


>gi|152965219|ref|YP_001361003.1| diaminopimelate decarboxylase [Kineococcus radiotolerans SRS30216]
 gi|151359736|gb|ABS02739.1| diaminopimelate decarboxylase [Kineococcus radiotolerans SRS30216]
          Length = 463

 Score =  192 bits (488), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 61/408 (14%), Positives = 119/408 (29%), Gaps = 46/408 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA------GVKLLLALKCFAAWGMFDTLNQYMDGTT 56
            TP +++D+               +A      G  +  A K F A G+   +        
Sbjct: 52  GTPLFVVDELDFRTRAVAFRDAFADAFADLCGGADVYYASKAFTATGVTRWIAADGLHLD 111

Query: 57  SSSLYEVMLG-HEKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQK 113
           ++S  E+ LG          A +   K       A+      I+ ++ ++++   D A++
Sbjct: 112 TASAGELELGLRGGVPPARIALHGNNKSRREIVRALEVGVGRIVVDSPAEIDVIADLARE 171

Query: 114 --LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLM 162
             +   + LR+   V               + G               +      + GL 
Sbjct: 172 RGVVAPVMLRVTVGVEAHTHQYIATAHEDQKFGVSLASGQAEAAVARILARPELRLLGLH 231

Query: 163 FHNNCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL 218
            H   +      F      +L+   K       ++  + LGGG                +
Sbjct: 232 SHIGSQIFDLGGFEVSARRLLELHHKVERDHGVELPELDLGGGYGVAYTSEDAPLAPTEI 291

Query: 219 KEFSEKYSVQIYL-----------EPGEAIVTNTTTLNTTVLDISE------NIKNLVIV 261
                +   +  L           EPG AI   +T     V    E        +  V V
Sbjct: 292 AGRLAEIVARECLVQGIAVPRVSVEPGRAIAAPSTFTLYEVGTTKEVELDGGTRRRYVSV 351

Query: 262 DSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGD 316
           D  +  ++   L   +     A+         + V G+ C +GD+     F    +  GD
Sbjct: 352 DGGMSDNIRTALYGADYSATVASRASTAPGVLSRVVGKHCESGDVVVRDEFLPEDLGGGD 411

Query: 317 RISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            ++      Y  +  + +N +  P +           +R  +  D   
Sbjct: 412 LLAVPGTGAYCRSMASNYNQLPRPGVVAVRDGSATVLVRRETPEDLLA 459


>gi|307710846|ref|ZP_07647273.1| protein tabA [Streptococcus mitis SK321]
 gi|307617291|gb|EFN96464.1| protein tabA [Streptococcus mitis SK321]
          Length = 416

 Score =  192 bits (488), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 61/392 (15%), Positives = 116/392 (29%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   SS  
Sbjct: 19  PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78

Query: 62  EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++ H+  F G    ++     D E         TI  +    +   +  A        
Sbjct: 79  ELLMSHKLDFPGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERAAGIPEIISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169
                 V      + D     ++ G       E+         +   ++  L  +     
Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                   + +   +        +++I+L GGI    +     +    + E   K   + 
Sbjct: 198 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEPNDIALIGEGVRKVYEEV 257

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     I+ E G  ++     L T V    +  +  + VD+S    +   +     
Sbjct: 258 LTPAGLGQVKIFTELGRFMLAPHGALVTRVTHKKKTYRTYLGVDASAVNLMRPAMYGAYH 317

Query: 279 A--TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
               +    GP     V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HITNVTHPDGPAEVVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                   +   +G  + IR      DY+  L
Sbjct: 378 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 409


>gi|123968729|ref|YP_001009587.1| diaminopimelate decarboxylase [Prochlorococcus marinus str. AS9601]
 gi|123198839|gb|ABM70480.1| Diaminopimelate decarboxylase [Prochlorococcus marinus str. AS9601]
          Length = 457

 Score =  192 bits (488), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 56/397 (14%), Positives = 124/397 (31%), Gaps = 35/397 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA---GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P Y++D+  L  +        +         + A K  ++  M + ++    G  + S
Sbjct: 49  DSPLYILDETTLRMSCRAYKKALEKYYPGETLPIYASKANSSIFMSNLVSSEGLGLDAVS 108

Query: 60  LYEVMLGHEK-FGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             E++   +     E   ++     D EID  + N   II +    L + ++ +  L+  
Sbjct: 109 EGELLTALKGGVPNEKIVFHGNNKSDKEIDFAIKNNIKIIVDNDYDLKRLEEVSNSLNHD 168

Query: 118 IGLRIN--PSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCE 168
           + + I   P +              S+ G   +       +  +++   + G+  H   +
Sbjct: 169 LEIMIRFTPGIECHTHEYIRTGSFDSKFGFGIEYLNNLFANISDTKHLKLRGIHAHIGSQ 228

Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEF---- 221
                    + + + K       F   I+ +++GGG+                 +     
Sbjct: 229 IFELEPHKDLGEIMVKVILDAKKFGHNIKELNVGGGLGIKYTKNDDPPSIDEWVKTISTS 288

Query: 222 ----SEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDY 272
                +K++    ++  EPG +IV+        +    E         VD  +  +    
Sbjct: 289 VVEACKKHNLDLPKLMCEPGRSIVSTAGITIYKIGAFKEIPGIRTYLSVDGGMSDNPRPI 348

Query: 273 LLYQESATIY-----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
                 +                 + G+ C +GD+  +       K GD I       YN
Sbjct: 349 TYQSNYSACLVKNPLNINSKNKYTIAGKHCESGDVLLKEIELANCKTGDLICVFGTGAYN 408

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           ++  + +N I  P   +          +  S  D   
Sbjct: 409 VSMSSNYNRIPRPAALLVCDGEAEIIQKRESPFDLLR 445


>gi|313891660|ref|ZP_07825267.1| putative diaminopimelate decarboxylase [Dialister microaerophilus
           UPII 345-E]
 gi|313119938|gb|EFR43123.1| putative diaminopimelate decarboxylase [Dialister microaerophilus
           UPII 345-E]
          Length = 415

 Score =  192 bits (488), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 63/391 (16%), Positives = 121/391 (30%), Gaps = 28/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+Y+ D++ + +N++         +      A+K      +   L+    G   SS+ 
Sbjct: 21  GTPFYIYDQKGIEDNINNFEKSFSWCSNFYKYFAVKATPNPWILKLLHNMGIGADCSSMA 80

Query: 62  EVMLGHE-KFGGETHAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E++L       G+   ++     D E     S    I  + +S     +   + + +KI 
Sbjct: 81  ELILAEAVGLKGKEIVFSSNNTADEEFIKANSLGAIINLDDISMFEDLERL-KIIPEKIS 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS-------- 171
            R NP    S           ++ G   +  +ES        +                 
Sbjct: 140 FRYNPGNKVSIGNNFIGKPEDAKYGMTKEQLLESVQIAKKLKIPFIGIHTMIVSSELTLD 199

Query: 172 --FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
                   + +   +    F   +++I  GGGI    +          L + + +    +
Sbjct: 200 VLIANIRMLFELAIEIREKFNVIVDFIDFGGGIGIPYRPDDRAVNLFELGKRTHELFKSM 259

Query: 230 Y---------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280
                      E G AI      L T  +      K  + VD+ +   +   +       
Sbjct: 260 MSGFEKTQLSFECGRAITGPYGYLVTKAIHHKNIYKKYIGVDACMADLMRPGIYGAYHEI 319

Query: 281 IYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
              +           + G  C   D F        +  GD I   D   +  +    +NG
Sbjct: 320 TVCSKEDTNETEIYDIVGSLCENNDKFAINRKLPKISKGDLIVIHDTGAHGHSMGFNYNG 379

Query: 337 INMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                  + + DGTI+ IR   + ND ++ L
Sbjct: 380 KLRHQELLLHSDGTIQKIRRNETLNDLFSTL 410


>gi|160891934|ref|ZP_02072937.1| hypothetical protein BACUNI_04392 [Bacteroides uniformis ATCC 8492]
 gi|270296403|ref|ZP_06202603.1| diaminopimelate decarboxylase [Bacteroides sp. D20]
 gi|317480402|ref|ZP_07939501.1| diaminopimelate decarboxylase [Bacteroides sp. 4_1_36]
 gi|156858412|gb|EDO51843.1| hypothetical protein BACUNI_04392 [Bacteroides uniformis ATCC 8492]
 gi|270273807|gb|EFA19669.1| diaminopimelate decarboxylase [Bacteroides sp. D20]
 gi|316903435|gb|EFV25290.1| diaminopimelate decarboxylase [Bacteroides sp. 4_1_36]
          Length = 386

 Score =  192 bits (488), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 65/366 (17%), Positives = 123/366 (33%), Gaps = 28/366 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTAL-YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           ++TP+Y  D + L + L        +     +  A+K  A   +   + +   G    S 
Sbjct: 13  LRTPFYYYDTKVLRDTLSCIRTEAARYGNYSVHYAVKANANPKVLAIIRENGLGADCVSG 72

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115
            E+       F      +    K      +  + D   FN  +V +L    + A  +   
Sbjct: 73  GEIRAAIKAGFPTGKIVFAGVGKADWEINLGLDYDIFCFNVESVPELEIINELAAAKGKV 132

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCE 168
             +  RINP+V              ++ G   +D           +     GL FH   +
Sbjct: 133 ANVAFRINPNVGAHTHANITTGLAENKFGISMQDMDHVIDIAQNMKNLRFIGLHFHIGSQ 192

Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
                 F+     +  ++ +      +IE +++GGG+      +P +      K + E Y
Sbjct: 193 ILDMGDFVALCNRVNELQDKLEARHIRIEHVNVGGGLGIDYG-HPNRQPIPDFKSYFETY 251

Query: 226 --------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQ 276
                      ++ E G A+V    +L + VL + +       + D+ +   +   L   
Sbjct: 252 NSHLKLRPHQTLHFELGRAVVGQCGSLISQVLYVKQGTNKQFAILDAGMTDLIRPALYQA 311

Query: 277 ES--ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                 I  +       V G  C + D+FG+      VK GD I+      Y     + +
Sbjct: 312 FHKIENITSDAPVQAYDVVGPICESSDVFGKAIDLNGVKRGDLIALRSAGAYGEIMASGY 371

Query: 335 NGINMP 340
           N   +P
Sbjct: 372 NCRELP 377


>gi|320354419|ref|YP_004195758.1| diaminopimelate decarboxylase [Desulfobulbus propionicus DSM 2032]
 gi|320122921|gb|ADW18467.1| diaminopimelate decarboxylase [Desulfobulbus propionicus DSM 2032]
          Length = 418

 Score =  192 bits (488), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 52/387 (13%), Positives = 110/387 (28%), Gaps = 23/387 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+++ D+  +            +    +   A+K      +   +     G   SS+ 
Sbjct: 23  GTPFHIYDEAGIRETGRRLKAAFADIPEFREYYAVKALPNPSVLAIMQDMGFGFDCSSIT 82

Query: 62  EVMLGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+ML  E     +   +       +    A       +  + ++ ++K     + +  + 
Sbjct: 83  ELMLARELGAKPDDIMFTSNNTSAEDFAAAAADGGCILNLDDITLIDKVPTMPELVCFRY 142

Query: 119 GL-RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS- 176
              R                        +     ++      GL          +     
Sbjct: 143 NPGRRRTGNDIIGKPEEAKYGVSHEQIVEAYRLAQARGAKRFGLHTMLASNELHYSYMVQ 202

Query: 177 ---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL----------KEFSE 223
               +L+ +E          E+I++GGG+             + +           +   
Sbjct: 203 TAAMLLELVETISKELGITFEFINIGGGLGIPYLPDIDPLNIEAMGEEITALFVDFKDHH 262

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
            Y   +Y+E G  +      L    ++  +  +  + VD+ + A +   L          
Sbjct: 263 GYCPALYMESGRYMTGPHGALVVRAINRKDIYRTYIGVDACMSALMRPALYGAYHHIEVL 322

Query: 284 NTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                   T  V G  C   D F        +  GD +  +D   +       +NG   P
Sbjct: 323 GKEGGEMETVDVVGSLCENNDKFAVQRPLPRITDGDILIIQDSGAHGHAMGFNYNGKMRP 382

Query: 341 TIAVKNVDGTIKAIREFS-YNDYYNNL 366
              +   DG ++ IR      DY+  L
Sbjct: 383 QELLLGKDGVVRMIRREERPEDYFATL 409


>gi|317125576|ref|YP_004099688.1| diaminopimelate decarboxylase [Intrasporangium calvum DSM 43043]
 gi|315589664|gb|ADU48961.1| diaminopimelate decarboxylase [Intrasporangium calvum DSM 43043]
          Length = 475

 Score =  192 bits (488), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 58/409 (14%), Positives = 109/409 (26%), Gaps = 47/409 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA------GVKLLLALKCFAAWGMFDTLNQYMDGTT 56
            TP Y++D+                       G  +  A K F    +   +        
Sbjct: 61  GTPAYVLDEDDFRARAREFKQTYAEVFDDLCGGADVYYAGKAFLCTEVARWIRDEGLFLD 120

Query: 57  SSSLYEVMLG-HEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQK 113
             +  E+ +       G +   +   K       A+      II ++  ++ +    A +
Sbjct: 121 VCTGGELAVAIRAGVPGSSIGMHGNNKSAAEIRAALDHGVSRIIVDSFEEIERVAAIAAE 180

Query: 114 L--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCK----------DKIESEIKNVNGL 161
           L     + +R+   V               + G                   +   + GL
Sbjct: 181 LGVIAPVLVRVTVGVEAHTHEFIATAHEDQKFGFSLAGGHAIEAVRQVLARPDTLRLLGL 240

Query: 162 MFHNNCENKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR 217
             H   +      F    +       +       ++  + LGGG              + 
Sbjct: 241 HSHIGSQIFDTAGFEVSARRVLGLHTQIARELGVELPELDLGGGFGIAYTTEHDPQSPKA 300

Query: 218 LKEFSEKYSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENIKN------LVI 260
           L     +   +             +EPG AI   +T     V  +     +       V 
Sbjct: 301 LAVGMAEIVERECRADGVAVPRISIEPGRAIAGPSTFTLYEVGTVKPVELDGGASRLYVS 360

Query: 261 VDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIG 315
           VD  +  ++   L   +     A       P  A V GR C +GDI  +  F    V  G
Sbjct: 361 VDGGMSDNIRTALYDADYSCTVANRRSEATPSLARVVGRHCESGDIVVKDEFLPGDVGPG 420

Query: 316 DRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           D ++      Y     + +N    P +           +R  + +D   
Sbjct: 421 DLVAVPGTGAYCRALSSQYNHTPRPPVIAVRDGQARVIVRRETIDDLLA 469


>gi|254774332|ref|ZP_05215848.1| diaminopimelate decarboxylase [Mycobacterium avium subsp. avium
           ATCC 25291]
          Length = 472

 Score =  192 bits (488), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 50/406 (12%), Positives = 114/406 (28%), Gaps = 45/406 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +++D+    +            G  +  A K F    +   +++        +  E
Sbjct: 64  GTPLFVVDEDDFRSRCREIASAFGG-GNNVHYAAKVFLCSEVARWIDEEGLSLDVCTGGE 122

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + +     F  E   ++   K       AV +    ++ ++++++ +    A        
Sbjct: 123 LAVALHADFPPERITFHGNNKSVAELTAAVKAGVGHVVLDSMTEIERLDAIAADAGIVQD 182

Query: 120 LRIN--PSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168
           + +     V               + G                ++E   + GL  H   +
Sbjct: 183 VFVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAALAAVGRVFDTEHLRLVGLHSHIGSQ 242

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F      ++  +      F  +    I  + LGGG+  +            L  
Sbjct: 243 IFDVAGFELAARRVIGLLHDAVEQFGVEKTAQIATVDLGGGLGISYLAADEPPPMGELAG 302

Query: 221 FSEKYSVQ-----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS----- 264
                              + +EPG AI    T     V  + +   +            
Sbjct: 303 KLSAIVQHESAAVRLPTPRLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDG 362

Query: 265 -VEAHVP----DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRI 318
            +  ++     D        +   +     A + G+ C +GDI     +    ++ GD I
Sbjct: 363 GMSDNIRTALYDAQYDARLVSRVSDAPAELARIVGKHCESGDIVVRDTWVPGDLRPGDLI 422

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
                  Y  +  + +N +  P +           +R  + +D  +
Sbjct: 423 GVAATGAYCYSLSSRYNMVCRPAVVAVRDGRARLVLRRETVDDLLS 468


>gi|283777952|ref|YP_003368707.1| diaminopimelate decarboxylase [Pirellula staleyi DSM 6068]
 gi|283436405|gb|ADB14847.1| diaminopimelate decarboxylase [Pirellula staleyi DSM 6068]
          Length = 422

 Score =  192 bits (488), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 56/397 (14%), Positives = 114/397 (28%), Gaps = 43/397 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D   +   +D            +  A K  +   + D + +      + S  E
Sbjct: 27  GTPTYVYDAAIIEERIDDLAKFDV-----IRYAQKACSNIAILDLMRKKGVVVDAVSTGE 81

Query: 63  VMLGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
           +                  Y     D +  A +   D  +   +   L++    A K   
Sbjct: 82  IHRAMAAGYKPGSKNHEIVYTADIFDRDALATVVKLDIPVNCGSPDMLDQLG--AVKPGA 139

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENK 170
            + LRINP   +      +     S+ G   +   +   K       ++G+  H      
Sbjct: 140 HVTLRINPGFGHGHSQKTNTGGEQSKHGIWHEQLTDCLQKADRHGLMISGIHMHIGSGTD 199

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFSEK-- 224
                S +   +E+        I  IS GGG+            +  + +      ++  
Sbjct: 200 -LEHLSQVCSAMERVVLEVGRSITTISAGGGLPIPYNDKQTYVDLDQYFELWDASRKRLE 258

Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-PDYLLYQESA 279
               + + + +EPG  +V  +  L + +  I +   N   +  +   ++    L      
Sbjct: 259 AALGHKISLEIEPGRYLVAESGYLVSEIRAIKQMGNNTFYLLDAGFNNLARPILYGSYHP 318

Query: 280 TIYPN-----TGPYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVAGYN 327
                           +V G  C +GDIF +              +IG+ +  E    Y 
Sbjct: 319 MSIVPLDAGERADRDVVVGGPLCESGDIFTQEEGGYVCKRSLPSARIGEYLVLERAGAYG 378

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
               + +N   +    +             +  D   
Sbjct: 379 FVMASNYNSKPLAAEVLIKNGTAHLVRERQTPADLIR 415


>gi|260599186|ref|YP_003211757.1| diaminopimelate decarboxylase [Cronobacter turicensis z3032]
 gi|260218363|emb|CBA33402.1| Diaminopimelate decarboxylase [Cronobacter turicensis z3032]
          Length = 420

 Score =  192 bits (487), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 56/398 (14%), Positives = 112/398 (28%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +D            +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRTQIDRLRQFDV-----IRFAQKACSNIHILRLMREAGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D    A        +   +V  L +    A     ++
Sbjct: 82  RAIAAGYDPRQNPDDIVFTADVLDEATLARVHELGVPVNAGSVDMLEQLG--AVSPGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172
            LRINP   +      +     S+ G    D   +          + G+  H        
Sbjct: 140 WLRINPGFGHGHSQKTNTGGENSKHGIWYSDLPAALAVMQRYQLKLIGMHMHIGSGVDYG 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP-------VKDFCQRLKEFSEKY 225
                    + +    F   +E IS GGG+    ++               R +E   ++
Sbjct: 200 HLERVCGAMVSQVI-EFGQDLEAISAGGGLSIPYREGDETIDTGHYFGLWNRAREQIAEH 258

Query: 226 SVQIY---LEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
                   +EPG  +V     L   V  +     ++ V++D+     +   +        
Sbjct: 259 FGHPIKLEIEPGRFLVAEAGVLVAQVRSVKEMGSRHFVLIDAGFNDLMRPSMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     +      +V G  C +GD+F        E      V+ GD +   D   Y
Sbjct: 319 ALAADGRDLRDAPRLDTVVAGPLCESGDVFTQQEGGKVETRALPAVRPGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    +          R  + ++   
Sbjct: 379 GASMSSNYNSRPLLPEVLLENGEARTIRRRQTIDELLA 416


>gi|332367400|gb|EGJ45133.1| diaminopimelate decarboxylase [Streptococcus sanguinis SK1059]
          Length = 416

 Score =  192 bits (487), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 57/392 (14%), Positives = 120/392 (30%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   +S  
Sbjct: 19  PTPFHLYDEKGIRERARALHEAFSWNPGFKEYFAVKATPNPAILKILKEEGCGVDCASYV 78

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++  +  F G+   ++       E         TI  +    +   K+ A        
Sbjct: 79  ELLMSQKLGFAGQDIMFSSNNTPAEEFQFARDLGATINLDAYEDVAFLKEAAGIPKIISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMF----HNNCEN 169
                 V      + D     ++ G      I++  +         G+      +    +
Sbjct: 139 RYNPGGVFELGTSIMDNP-EEAKFGMTKDQLIQAFKELKEFGAEKFGIHALLASNTVSND 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227
                   + +   +       ++++I+L GG+    +    ++    + +   +     
Sbjct: 198 YYPELARQLFELAVEVVVETGVELDFINLSGGVGINYQPEGEENDIAVIGQGVRQAYEAI 257

Query: 228 ---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                    +IY E G  ++     L T V    +  +  + VD+S    +   +     
Sbjct: 258 LTPAGLGQVKIYTELGRFMLAPYGLLVTKVTHKKQTYRTYLGVDASAVNLLRPAMYGSYH 317

Query: 279 A---TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                + P        V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HITNMVRPEGETEIVDVVGSLCENNDKFAINRALPVSQIGDTLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                +  +   DG ++ IR      DY+  L
Sbjct: 378 AKLRSSEILLEQDGNVRMIRRAEKPEDYFATL 409


>gi|291522849|emb|CBK81142.1| Diaminopimelate decarboxylase [Coprococcus catus GD/7]
          Length = 426

 Score =  192 bits (487), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 59/391 (15%), Positives = 119/391 (30%), Gaps = 29/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +  N          N G K   A+K      +   + +   G   ++  
Sbjct: 20  PTPFHLYDEKGIRENARKVYKAFSWNKGFKEYFAVKATPNPAILQIMKEEGCGLDCATKV 79

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+M+     F G    ++       E          I F+ ++ L  F++   +  + + 
Sbjct: 80  ELMMAKACGFTGHDVMFSSNVTPANEYAYAKDMGVIINFDDITHLKYFEENVGEFPETVC 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK----IESEIKNVN--GLMFHNNCENKSFL 173
            R N    +            ++ G   +         + K V   G+        K+  
Sbjct: 140 CRFNTGGDFKISTAIMDVPGEAKYGFTREQLTEGFKYLKSKGVKHFGIHAFLASNTKTND 199

Query: 174 CF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
            +      + K   +        I++I+L GG+          +  + + E   K   +I
Sbjct: 200 YYPALAKILFKTAVELHEETGADIKFINLSGGVGVAYSPDETPNDIEVIGEGVHKVYDEI 259

Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                      + E G  ++     L  T +      K  + +D+     +   +     
Sbjct: 260 LVPAGMGDVAIFTEMGRFMLAPYGHLIATAIHEKHIFKEYIGLDACAANLMRPAIYGAYH 319

Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                            V G  C   D F        + +GD I   D   +  +    +
Sbjct: 320 HITVAGKENEPCDHMYDVTGGLCENSDKFAVNRMLPKIDMGDYIIIHDTGAHGFSMGYNY 379

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   DG+ + IR   +  DY+ 
Sbjct: 380 NGKLRSAEVLLKEDGSTELIRRAETPMDYFA 410


>gi|288802899|ref|ZP_06408336.1| diaminopimelate decarboxylase [Prevotella melaninogenica D18]
 gi|288334716|gb|EFC73154.1| diaminopimelate decarboxylase [Prevotella melaninogenica D18]
          Length = 385

 Score =  192 bits (487), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 67/365 (18%), Positives = 121/365 (33%), Gaps = 26/365 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           I+TP+Y  D   L   L      ++K     +  A+K  A   +   + Q   G    S 
Sbjct: 13  IETPFYYYDCDLLRETLQAINKELKKYENFIVHYAIKANANAKVLKVIQQTGMGADCVSG 72

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115
            E+    +  F  +   Y    K      +  + D   FN  +V++L    + A  +   
Sbjct: 73  GEIQRCLDCGFPADKIVYAGVGKSDWEINLGLDHDIFCFNVESVAELEVINELAAKKGKT 132

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGE-------KCKDKIESEIKNVNGLMFHNNC- 167
             +  RINP V              ++ G           +       +  GL FH    
Sbjct: 133 ANVCFRINPDVGAQTHEKITTGLAENKFGIAMQDMLPTILEASRMPNIHFIGLHFHIGSQ 192

Query: 168 --ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-- 223
             E   F    + +  I+        +I+ I++GGG+     +            F    
Sbjct: 193 LLEMTDFRHLCSRINEIQDGLEQENIKIKNINVGGGLGIDYDNPDNHPIPDFKSYFYTFA 252

Query: 224 -----KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLY-- 275
                +   +++ E G A+V    +L T  L + +   K   IVD+ +   +   L    
Sbjct: 253 RYLKLREGQKLHFELGRAVVGQMGSLITRTLYVKQGTAKQFAIVDAGMTDLIRPALYQAS 312

Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
            +   +  +   +   V G  C + D+F +      V  GD I+      Y     + +N
Sbjct: 313 HKIENLSSDGALHAYDVVGPICESSDVFAKGIELNTVHRGDLIAMRSAGAYGEIMASQYN 372

Query: 336 GINMP 340
              +P
Sbjct: 373 CRKLP 377


>gi|282924293|ref|ZP_06331967.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           C101]
 gi|282313680|gb|EFB44073.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           C101]
          Length = 404

 Score =  192 bits (487), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 60/376 (15%), Positives = 120/376 (31%), Gaps = 32/376 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D+ ++   +       K++G+K  +  A K F    M   + +        S 
Sbjct: 26  GTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTCLQMVKLVAEEDLQLDVVSE 85

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    E  F      ++   K          +N    + +++ ++      A    + 
Sbjct: 86  GELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVIDSLEEIELIDRYANDTVQV 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168
           + LR+NP V           +  S+ G   +            +S+   + G+  H   +
Sbjct: 146 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAIKAINKVQQSKYLKLKGVHCHIGSQ 204

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
            +    F    K + +       Q+E ++LGGG      +       +   +        
Sbjct: 205 IEGTEAFIETAKIVLRWLKEQDIQVELLNLGGGFGIKYVEGDESFPIESGIKDITDAIKS 264

Query: 229 IY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274
                        +EPG +IV         V  I E  +    V     +  H+   L  
Sbjct: 265 EIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKEIPEINKYVSIDGGMSDHIRTALYD 324

Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331
             YQ            +  + G+ C +GDI  +       VK GD ++      Y+ +  
Sbjct: 325 AKYQALLVNRNEEADDSVTIAGKLCESGDIIIKDAKLPSSVKRGDYLAILSTGAYHYSMA 384

Query: 332 NWFNGINMPTIAVKNV 347
           + +N +  P++     
Sbjct: 385 SNYNQMQKPSVFFFKR 400


>gi|254368983|ref|ZP_04984996.1| hypothetical protein FTAG_00817 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157121904|gb|EDO66074.1| hypothetical protein FTAG_00817 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 389

 Score =  192 bits (487), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 58/370 (15%), Positives = 118/370 (31%), Gaps = 31/370 (8%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           TP Y+ D + L +    A           ++  A+K      +     +Y  G    S  
Sbjct: 23  TPCYIYDLELLEDTFLNAKKSLDKNFKNAEIHYAIKANHNPKIVGIAKKYGMGIDCVSGG 82

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--I 118
           E+    E K   +   +     +  ID  +         ++ ++      AQ+ +K+  I
Sbjct: 83  EIKRALEQKVDSQHIVFAGVEIELAIDNDIFA---FNSESLEEIQVINQIAQRKNKQVNI 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN--------VNGLMFHNNCENK 170
            LR+NP++           +   + G    D +              + GL +H   +  
Sbjct: 140 CLRVNPNIDAQTHHYISTGQFDDKFGIAFVDILNWLKDEYRNFANISIIGLHYHVGSQIL 199

Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEF 221
           ++  F           K        I+ I+ GGG+                 +  R +EF
Sbjct: 200 NYQVFQSLAITTNEHIKLLRQNDINIKHINFGGGLGIDYQNPQQNPIVDFDGYFARFREF 259

Query: 222 SEKYSV-QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESA 279
            +      ++ E G ++V  +  L + VL        + VI+D+ +   +   L   +  
Sbjct: 260 FKYCDELALHFELGRSLVGQSGVLVSQVLFNKVTQGTHFVIIDAGMTELIRPALYQAQHK 319

Query: 280 TIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                           + G  C + D+F +++    +K GD ++      Y     + +N
Sbjct: 320 IAALIDKNINQKQHYHIVGPICESSDVFAKYYQLPKLKRGDLLAIYSAGAYGKVLASEYN 379

Query: 336 GINMPTIAVK 345
                     
Sbjct: 380 LRPSVQEYFI 389


>gi|322391328|ref|ZP_08064798.1| diaminopimelate decarboxylase [Streptococcus peroris ATCC 700780]
 gi|321145754|gb|EFX41145.1| diaminopimelate decarboxylase [Streptococcus peroris ATCC 700780]
          Length = 417

 Score =  192 bits (487), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 58/392 (14%), Positives = 110/392 (28%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   SS  
Sbjct: 19  PTPFHLYDEKGIREKARAVNKAFSWNKGFKEYFAVKATPNPTILKILQEEGCGVDCSSYV 78

Query: 62  EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++ H+  F G    ++     D E         TI  +    +   +  A        
Sbjct: 79  ELLMSHKLGFSGSEMMFSSNNTPDREYTYAHELGATINLDAFEDIEHLERAAGIPEVISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE----IKNVNGLMFH------NNCEN 169
                 V      + D     ++ G   +   ++      K       H           
Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKQQLFDAYKILKDKGAKRFGLHSFLASNTVTHL 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                   + +   +        +E+I+L GGI    +     +    + E   +   + 
Sbjct: 198 YYPELARQLFELAVEVKEKLGISLEFINLSGGIGVNYRPEQEPNDIALIGEGVRQVYEEV 257

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     I+ E G  ++     L T V    +  +  + VD+S    +   +     
Sbjct: 258 LTPAGLGQVKIFTELGRFMLAPHGVLVTRVTHKKKTYRTYLGVDASAVNLMRPAMYGAYH 317

Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                           V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HITNMMHPDGQTEVVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTI-KAIREFSYNDYYNNL 366
                   +   +G   +  R     DY+  L
Sbjct: 378 AKLRSAEILFTEEGKAKEIRRAERPEDYFATL 409


>gi|315611873|ref|ZP_07886792.1| diaminopimelate decarboxylase [Streptococcus sanguinis ATCC 49296]
 gi|315316051|gb|EFU64084.1| diaminopimelate decarboxylase [Streptococcus sanguinis ATCC 49296]
          Length = 419

 Score =  192 bits (487), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 60/392 (15%), Positives = 116/392 (29%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   SS  
Sbjct: 21  PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 80

Query: 62  EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++ H+  F G    ++     D E         TI  +    +   +  A        
Sbjct: 81  ELLMSHKLDFPGSEIMFSSNNTPDQEYAYARELGATINLDAFEDIEHLERAAGIPEIISC 140

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169
                 +      + D     ++ G       E+         +   ++  L  +     
Sbjct: 141 RYNPGGIFELGTDIMDNPG-EAKFGMTKDQLFEAFAVLKEKGAKTFGIHSFLASNTVTHL 199

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                   + +   +        +++I+L GGI    +     +    + E   K   + 
Sbjct: 200 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEPNDIAVIGEGVRKVYEEV 259

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     I+ E G  ++     L T V    +  +  + VD+S    +   +     
Sbjct: 260 LTPAGLGQVKIFTELGRFMLAPHGALVTRVTHKKKTYRTYLGVDASAVNLMRPAMYGAYH 319

Query: 279 A--TIYPNTGPYTA-MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
               +    GP     V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 320 HISNLTHPDGPVEVVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 379

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                   +   +G  + IR      DY+  L
Sbjct: 380 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 411


>gi|291513977|emb|CBK63187.1| diaminopimelate decarboxylase [Alistipes shahii WAL 8301]
          Length = 387

 Score =  192 bits (487), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 70/372 (18%), Positives = 128/372 (34%), Gaps = 27/372 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+YL D   L   L++ +Y  K  G K+  A+K      +   + +Y  G   +S  E
Sbjct: 14  ETPFYLYDMALLRQTLESVVYESKKYGYKVHYAIKANYDDHLLAVIREYGLGIDCASGNE 73

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117
           +    E  F  +   Y    K  +        +   I   ++ +L      + +      
Sbjct: 74  LRKAVEAGFDPKGIVYAGVGKRDKELKYAIEQNILAINCESIQELELVDALSAEAGKVTD 133

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG-------EKCKDKIESEIKNVNGLMFHNNCENK 170
           I LRINP +        D  +  S+ G       E   +    +  N+ GL  H   + +
Sbjct: 134 IALRINPDIDPKTNHCIDTGQADSKFGISYEEVLEHAAEIRSLKNVNIIGLHLHIGSQIR 193

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEF 221
               F  M      I +       +  ++ +GGG+                     +   
Sbjct: 194 ELHVFENMCNKVNVIVENLEKLGCKFRFVDVGGGLGVNYDVPENEPIPNFASLFSIVHNH 253

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDYLLYQESA 279
                 +++ E G +IV     L TTVL    +   + LVIVD+S+   V   +      
Sbjct: 254 LRIGDREVHFEFGRSIVAECGELITTVLFNKTTATGRKLVIVDASMTELVRPAMYGSYHN 313

Query: 280 TIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                           V G +C + D+F E    +    GD ++ +    Y ++  + +N
Sbjct: 314 IENITAKDDEVREKYTVVGTACESTDVFDENVTLRRTHRGDLLTIKSAGAYGMSMASRYN 373

Query: 336 GINMPTIAVKNV 347
             ++P     + 
Sbjct: 374 LHDLPGAVYSDE 385


>gi|293526768|ref|ZP_06671453.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           M1015]
 gi|290920840|gb|EFD97903.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           M1015]
          Length = 397

 Score =  192 bits (487), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 60/373 (16%), Positives = 120/373 (32%), Gaps = 32/373 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  + D+ ++   +       K++G+K  +  A K F    M   + +        S 
Sbjct: 26  GTPTIVYDELQIREQMRRYHRAFKDSGLKYNISYASKAFTCLQMVKLVAEEDLQLDVVSE 85

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+    E  F      ++   K          +N    + +++ ++      A    + 
Sbjct: 86  GELYTALEAGFEPSRIHFHGNNKTKHEIRYALENNIGYFVIDSLEEIELIDRYANDTVQV 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168
           + LR+NP V           +  S+ G   +            +S+   + G+  H   +
Sbjct: 146 V-LRVNPGVEAHTHEFIQTGQEDSKFGLSIQYGLAIKAINKVQQSKYLKLKGVHCHIGSQ 204

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
            +    F    K + +       Q+E ++LGGG      +       +   +        
Sbjct: 205 IEGTEAFIETAKIVLRWLKEQDIQVELLNLGGGFGIKYVEGDESFPIESGIKDITDAIKS 264

Query: 229 IY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL- 274
                        +EPG +IV         V  I E  +    V     +  H+   L  
Sbjct: 265 EIKVLGIDAPEIGIEPGRSIVGEAGVTLYEVGTIKEIPEINKYVSIDGGMSDHIRTALYD 324

Query: 275 --YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331
             YQ            +  + G+ C +GDI  +       VK GD ++      Y+ +  
Sbjct: 325 AKYQALLVNRNEEADDSVTIAGKLCESGDIIIKDAKLPSSVKRGDYLAILSTGAYHYSMA 384

Query: 332 NWFNGINMPTIAV 344
           + +N +  P++  
Sbjct: 385 SNYNQMQKPSVFF 397


>gi|270292095|ref|ZP_06198310.1| conserved hypothetical protein [Streptococcus sp. M143]
 gi|270279623|gb|EFA25465.1| conserved hypothetical protein [Streptococcus sp. M143]
          Length = 418

 Score =  192 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 61/392 (15%), Positives = 117/392 (29%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   SS  
Sbjct: 19  PTPFHLYDEKGIREKARAVNKAFSWNKGFKEYFAVKATPTPAILKILKEEGCGVDCSSYV 78

Query: 62  EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++ H+  F G    ++     D E         TI  + +  +   +  A        
Sbjct: 79  ELLMSHKLGFAGSEMMFSSNNTPDKEYAYARELGATINLDAIEDIEHLERAAGIPEIISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169
                 V      + D     ++ G       E+         +   ++  L  +     
Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKAQLFEAFAVLKEKGAKTFGIHSFLASNTVTHL 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                   + +   +        +++I+L GGI    +     +    + E   K   + 
Sbjct: 198 YYPELARQLFELAVEIKEKSGISLDFINLSGGIGVNYRPDQEPNDIAVIGEGVRKVYEEV 257

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     I+ E G  ++     L T V    +  +  + VD+S    +   +     
Sbjct: 258 LTPAGLGQVKIFTELGRFMLAPHGVLVTKVTHKKKTYRTYLGVDASAVNLMRPAMYGAYH 317

Query: 279 A--TIYPNTGPYTA-MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
               +    GP     V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HITNLTHPDGPVEVVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                   +   +G  + IR      DY+  L
Sbjct: 378 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 409


>gi|148985558|ref|ZP_01818747.1| OxaA-like protein precursor [Streptococcus pneumoniae SP3-BS71]
 gi|147922278|gb|EDK73399.1| OxaA-like protein precursor [Streptococcus pneumoniae SP3-BS71]
 gi|301800739|emb|CBW33387.1| pyridoxal-dependent decarboxylase [Streptococcus pneumoniae OXC141]
          Length = 416

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 61/392 (15%), Positives = 114/392 (29%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   SS  
Sbjct: 19  PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78

Query: 62  EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++    +  G E    +    D E         TI  +    +   +  A        
Sbjct: 79  ELLMSHKLDFLGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERVAGIPEIISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169
                 V      + D     ++ G       E+         +   ++  L  +     
Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                   + +   +        +++I+L GGI    +     +    + E   K   + 
Sbjct: 198 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEPNDIALIGEGVRKVYEEV 257

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     I+ E G  ++     L T V    E  +  + VD+S    +   +     
Sbjct: 258 LTSAGLGQVKIFTELGRFMLAPHGALVTRVTHKKETYRTYLGVDASAVNLMRPAMYGAYH 317

Query: 279 A--TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
               +    GP     V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HISNVTHPDGPAEAVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                   +   +G  + IR      DY+  L
Sbjct: 378 AKLRSAEILYTEEGEARQIRRAERPEDYFATL 409


>gi|149280434|ref|ZP_01886554.1| diaminopimelate decarboxylase [Pedobacter sp. BAL39]
 gi|149228848|gb|EDM34247.1| diaminopimelate decarboxylase [Pedobacter sp. BAL39]
          Length = 384

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 68/363 (18%), Positives = 122/363 (33%), Gaps = 28/363 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TP+Y  D   L N L       K     +  A+K      + + +     G    S  
Sbjct: 13  LETPFYYYDLALLQNTLSNCSAAAKVYNFHVHYAMKANFNPRVLEMIKATGFGADCVSGG 72

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116
           EV    E  F  +   +    K       A+          ++ +L    + A  +    
Sbjct: 73  EVKRAVEVGFNHQQIVFAGVGKSDREINDALDQQIFCFNVESIQELEVINELAGLKNTKA 132

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCEN 169
           K+ +RINP+V              ++ G          +   +SE     G+ FH   + 
Sbjct: 133 KVAIRINPNVDAHTHHNITTGLDENKFGINSWDLPQCAEVLKQSENLEFIGVHFHIGSQI 192

Query: 170 KSFLCFSAML---KNIEKEFGHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSE- 223
            S   F  +          F      ++ +++GGG+       +  + DF    K + + 
Sbjct: 193 TSMDVFKNLCVRVNEFAAWFEERGFIVKVLNVGGGLGIDYHNPEQQIPDFEAYFKVYHDF 252

Query: 224 ---KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESA 279
              + + +++ E G A+V    +L + VL +    K   IV D+ +   +    LYQ   
Sbjct: 253 LEVRSNQEVHFELGRALVGQCASLISKVLYVKNGKKKNFIVLDAGMTELMRPA-LYQAYH 311

Query: 280 TIYPNTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
            I   +G          V G  C + D FG+         GD I+      Y     + +
Sbjct: 312 QIDHLSGSKSAEGVKYDVVGPICESTDCFGKEVALPETFRGDLIALRSAGAYGEVMASHY 371

Query: 335 NGI 337
           N  
Sbjct: 372 NLR 374


>gi|221194457|ref|ZP_03567514.1| Orn/DAP/Arg decarboxylase 2 [Atopobium rimae ATCC 49626]
 gi|221185361|gb|EEE17751.1| Orn/DAP/Arg decarboxylase 2 [Atopobium rimae ATCC 49626]
          Length = 429

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 58/393 (14%), Positives = 114/393 (29%), Gaps = 31/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+++ D+ +++  +         N G +   A+K      +   L     G   ++  
Sbjct: 20  PTPFHIYDEAEIVRRVRLLQKAFSWNPGFREFFAIKATPNPTIIKLLRDLGCGCDCATAT 79

Query: 62  EVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           E++L       G      +      +     +    I  +    +    D A    L   
Sbjct: 80  ELVLADACGVTGSNIMLSSNDTPPEDFKRAAAQGAIINLDAGGDMLDTLDVALGGVLPDS 139

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKS 171
           I  R NP  ++        N   ++ G            +      V GL        + 
Sbjct: 140 ICARFNPGGTFESTNGIIGNPADAKFGMTEAQLFETFRVLRDRGVKVFGLHAFLASNARE 199

Query: 172 FLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
              +      + +   +        I ++ L GGI    +          + E   +   
Sbjct: 200 QDYYPKLARILFELAVRLHRELGIHIGFVDLSGGIGVAYRPEEASADVCAIGEGVRRAYE 259

Query: 228 Q-----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ 276
           +           IY E G  ++     L T VL       + + VD+     +   +   
Sbjct: 260 EVLVSENMDDVAIYSELGRWLLAPAGGLVTRVLHEKVTYHDYLGVDACAANLMRPAIYDA 319

Query: 277 ESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                   +      +   V G  C   D F        V +GD +   D   +  +   
Sbjct: 320 YHHITVMGSEDVPADHVYSVVGGLCENNDQFARDRALPKVHVGDLLFIHDTGAHGFSMGY 379

Query: 333 WFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
            +NG       + + D T++ IR   +  DY+ 
Sbjct: 380 NYNGKLRSAELLYHEDKTVELIRRAETMADYFA 412


>gi|315223132|ref|ZP_07865000.1| putative diaminopimelate decarboxylase [Streptococcus anginosus
           F0211]
 gi|315187821|gb|EFU21568.1| putative diaminopimelate decarboxylase [Streptococcus anginosus
           F0211]
          Length = 420

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 56/392 (14%), Positives = 115/392 (29%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   +S  
Sbjct: 23  PTPFHLYDEKGIRETARALQKAFSWNQGFKEYFAVKATPNPTILKILKEEGCGVDCASYV 82

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++  +  F G    ++      E          TI  +    +   ++ A        
Sbjct: 83  ELLMSQKVGFSGNDMMFSSNDTPAEEIQFARELGATINLDAYEDVAFLQEVASIPEIISC 142

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES----EIKNVNGLMFH------NNCEN 169
                 V      + D     ++ G   +  I++    +   V     H          +
Sbjct: 143 RYNPGGVFELGTDIMDSP-EEAKFGMTKEQLIQAFKDLKKLGVKKFGIHALLASNTVTNH 201

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
                   + +   +        +++I+L GG+    +     +    + +   +   +I
Sbjct: 202 YYPELARQLFELAVEIVAETNVDLDFINLSGGVGVPYRPEEKANDILAIGQGVRRVYEEI 261

Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                      + E G  ++     L T VL   +  +  + VD+S    +   +     
Sbjct: 262 LTPAGLGKVKIFTELGRFMLAPHGLLVTKVLHKKKTYRTYIGVDASAVNLLRPAMYGAYH 321

Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                +          V G  C   D F          IGD +   D   +  +    +N
Sbjct: 322 HITNMDHPDGPTEIVDVVGSLCENNDKFAIQRELPITNIGDTLVIHDTGAHGFSMGYQYN 381

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                   +   DG ++ IR      DY+  L
Sbjct: 382 AKLRSAEILLEEDGGVRMIRRAEIPEDYFATL 413


>gi|148998508|ref|ZP_01825949.1| OxaA-like protein precursor [Streptococcus pneumoniae SP11-BS70]
 gi|168484277|ref|ZP_02709229.1| diaminopimelate decarboxylase [Streptococcus pneumoniae CDC1873-00]
 gi|168487115|ref|ZP_02711623.1| diaminopimelate decarboxylase [Streptococcus pneumoniae CDC1087-00]
 gi|168576622|ref|ZP_02722488.1| diaminopimelate decarboxylase [Streptococcus pneumoniae MLV-016]
 gi|225857551|ref|YP_002739062.1| diaminopimelate decarboxylase [Streptococcus pneumoniae P1031]
 gi|307068586|ref|YP_003877552.1| diaminopimelate decarboxylase [Streptococcus pneumoniae AP200]
 gi|147755701|gb|EDK62747.1| OxaA-like protein precursor [Streptococcus pneumoniae SP11-BS70]
 gi|172042473|gb|EDT50519.1| diaminopimelate decarboxylase [Streptococcus pneumoniae CDC1873-00]
 gi|183569971|gb|EDT90499.1| diaminopimelate decarboxylase [Streptococcus pneumoniae CDC1087-00]
 gi|183577610|gb|EDT98138.1| diaminopimelate decarboxylase [Streptococcus pneumoniae MLV-016]
 gi|225725810|gb|ACO21662.1| diaminopimelate decarboxylase [Streptococcus pneumoniae P1031]
 gi|301794920|emb|CBW37381.1| pyridoxal-dependent decarboxylase [Streptococcus pneumoniae INV104]
 gi|306410123|gb|ADM85550.1| Diaminopimelate decarboxylase [Streptococcus pneumoniae AP200]
 gi|332072163|gb|EGI82649.1| pyridoxal-dependent decarboxylase, C-terminal sheet domain protein
           [Streptococcus pneumoniae GA41301]
 gi|332199403|gb|EGJ13480.1| pyridoxal-dependent decarboxylase, C-terminal sheet domain protein
           [Streptococcus pneumoniae GA47368]
 gi|332199989|gb|EGJ14063.1| pyridoxal-dependent decarboxylase, C-terminal sheet domain protein
           [Streptococcus pneumoniae GA47901]
          Length = 416

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 61/392 (15%), Positives = 114/392 (29%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   SS  
Sbjct: 19  PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78

Query: 62  EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++    +  G E    +    D E         TI  +    +   +  A        
Sbjct: 79  ELLMSHKLDFLGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERVAGIPEIISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169
                 V      + D     ++ G       E+         +   ++  L  +     
Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                   + +   +        +++I+L GGI    +     +    + E   K   + 
Sbjct: 198 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEPNDIALIGEGVRKVYEEV 257

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     I+ E G  ++     L T V    E  +  + VD+S    +   +     
Sbjct: 258 LTSAGLGQVKIFTELGRFMLAPHGALVTRVTHKKETYRTYLGVDASAVNLMRPAMYGAYH 317

Query: 279 A--TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
               +    GP     V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HISNVTHPDGPAEAVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                   +   +G  + IR      DY+  L
Sbjct: 378 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 409


>gi|238751492|ref|ZP_04612984.1| Diaminopimelate decarboxylase [Yersinia rohdei ATCC 43380]
 gi|238710359|gb|EEQ02585.1| Diaminopimelate decarboxylase [Yersinia rohdei ATCC 43380]
          Length = 420

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 55/398 (13%), Positives = 114/398 (28%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +  D   +   ++            +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWAYDGDIITRKINQLRNFDV-----IRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGH-EKF----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                 F          +     D      ++  +  +   ++  L++    A      +
Sbjct: 82  RALHAGFQPGQEPAEIVFTADLLDQPTLLRVTELNIPVNAGSIDMLDQLGQHA--PGHPV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G   +D   +  K       + G+  H       +
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHEDLPHAINKVKQYGLTLVGIHMHIGSGVD-Y 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-------- 224
                +   + K+       I  IS GGG+    +    +   +                
Sbjct: 199 QHLEQVCAAMVKQVIDLGQDISAISAGGGLSIPYQFGDDEIDTEHYYGLWNHAREQIAAH 258

Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATI 281
             + V + +EPG  +V  +  L   V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVSLEIEPGRFLVAESGVLIAQVRAVKEMGSRHYVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 282 YPN--------TGPYTAMVCGRSCLAGDIFG-------EFHFEKPVKIGDRISFEDVAGY 326
                            +V G  C +GD+F        E       KIGD + F D   Y
Sbjct: 319 LLPADGRSLVAEPLIETVVAGPLCESGDVFTQEAGGGLETRALPAAKIGDYVVFHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    +          R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFEQGQPRLIRRRQTIEELIA 416


>gi|289167176|ref|YP_003445443.1| diaminopimelate decarboxylase [Streptococcus mitis B6]
 gi|288906741|emb|CBJ21575.1| diaminopimelate decarboxylase [Streptococcus mitis B6]
          Length = 416

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 61/392 (15%), Positives = 117/392 (29%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   SS  
Sbjct: 19  PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILKEEGCGVDCSSYV 78

Query: 62  EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++ H+  F G    ++     D E         TI  +    +   +  A        
Sbjct: 79  ELLMSHKLNFSGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERAAGIPEIISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169
                 V      + D     ++ G       E+         +   ++  L  +     
Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                   + +   +        +++I+L GGI    +     +    + E   K   + 
Sbjct: 198 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPEQEPNDIALIGEGVRKVYEEV 257

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     I+ E G  ++     L T V    +  +  + VD+S    +   +     
Sbjct: 258 LTPAGLGQVKIFTELGRFMLAPHGALVTRVTHKKKTYRTYLGVDASAVNLMRPAMYGAYH 317

Query: 279 A--TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
               +    GP     V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HITNVTHPDGPAEVVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                   +   +G  + IR     +DY+  L
Sbjct: 378 AKLRSAEILYTEEGKARQIRRAERPDDYFATL 409


>gi|229917988|ref|YP_002886634.1| diaminopimelate decarboxylase [Exiguobacterium sp. AT1b]
 gi|229469417|gb|ACQ71189.1| diaminopimelate decarboxylase [Exiguobacterium sp. AT1b]
          Length = 430

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 58/399 (14%), Positives = 117/399 (29%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++ + +L   L         K      L A K  +   +++ +          S 
Sbjct: 24  GTPLYIMSEPELERRLGIVRDAFLDKFPNTYALYASKALSIAAVYEKVMAAGMSIDVVSR 83

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+ +        E    + + K       A+         + + +++     A      
Sbjct: 84  GEMYVALHAGVPAERIHVHGSNKTILDITYALEQGITHFTIDNMREISLLSGLAAEYNRE 143

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
             + LRI P V              ++ G    D          +E+E   + G+  H  
Sbjct: 144 VDVLLRIVPQVVGGAHAAIQTGGVDTKFGFPTHDDTYLDAVRATLEAEHLQLKGIHCHVG 203

Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            + +           M++ ++          + +++GGG      D        +  E  
Sbjct: 204 SQIQDPTLFINTVKTMVRFMDTIRQETSYTTDVLNIGGGFGVAYLDEDEYLDFAQTMEQV 263

Query: 223 EKYSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
            +  V+             +EPG  +V N       V  + +       V     +  ++
Sbjct: 264 METLVEEVEARELPLPKIGIEPGRWLVANAGATLYEVGTVKKVSGVRTFVSVDGGMTDNI 323

Query: 270 PDYLLYQESATI----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L   E   +            A + G  C +GDI        PV  GD +  +    
Sbjct: 324 RPALYDAEYEVVAATRMNEEKTLEAKIVGACCESGDIISNRSLIPPVTSGDLLLVKATGA 383

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           YN +  + +N +  P +           +R  ++ D   
Sbjct: 384 YNFSMASNYNQMLRPAVVFVKDGNHRLVVRRQTFEDLVA 422


>gi|13541637|ref|NP_111325.1| diaminopimelate decarboxylase [Thermoplasma volcanium GSS1]
 gi|14325036|dbj|BAB59962.1| diaminopimelate decarboxylase [Thermoplasma volcanium GSS1]
          Length = 409

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 63/381 (16%), Positives = 124/381 (32%), Gaps = 29/381 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP  +    +++ N+ +          K   ++K  +   +   + +   G+  +SL E
Sbjct: 29  GTPVIIYSAPRIVKNVSSLFGAMPKV-TKCFYSVKANSNPNLVRLIGRQGCGSEVTSLGE 87

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGL 120
           + +        +   +       E      +    I FN+  Q     ++ ++       
Sbjct: 88  IQIAMISSIDPDDILFTPNNVSKEEMDFALDRGIKITFNSPGQFELVSNRVEEAT----F 143

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSFLC 174
           RINP + + +          S+ G   +  ++   +         G+       N     
Sbjct: 144 RINPGIGHGEHPGTTTGGHGSKFGIDPETALKLYTRAKELGIRKFGIHMMVGSNNTDADL 203

Query: 175 FSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI- 229
                K               Q  +I +GGG      D       ++L    ++   Q  
Sbjct: 204 MLTFYKKFFDMASEIEKTAHLQFSYIDIGGGFGVPYNDEQRSLDIKKLGSGLKELVDQYG 263

Query: 230 ----YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT--IYP 283
               ++EPG  IV +   L   V D+       V  D  +  ++   L   E     +  
Sbjct: 264 IERLFIEPGRYIVADAGILVGKVYDVYNG---FVGTDIGMNINIRHALYGAEHRFYALTG 320

Query: 284 NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343
            +     +V G+ C   D+ G       V+IGD ++  D   Y  +  + +NG   PT  
Sbjct: 321 RSDEAEYIVTGQICENTDVTG--RLTGKVQIGDLVAMYDAGAYIYSMSSNYNGRFRPTEV 378

Query: 344 VKNVDGTIKAIREFSYNDYYN 364
           + + DG  +  R  + ND   
Sbjct: 379 IVDHDGVYRIRRRETVNDILA 399


>gi|182684912|ref|YP_001836659.1| diaminopimelate decarboxylase [Streptococcus pneumoniae CGSP14]
 gi|182630246|gb|ACB91194.1| diaminopimelate decarboxylase [Streptococcus pneumoniae CGSP14]
          Length = 416

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 61/392 (15%), Positives = 113/392 (28%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   SS  
Sbjct: 19  PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78

Query: 62  EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++    +  G E    +    D E         TI  +    +   +  A        
Sbjct: 79  ELLMSHKLDFLGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERAAGIPEIISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169
                 V      + D     ++ G       E+         +   ++  L  +     
Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                   + +   +        +++I+L GGI          +    + E   K   + 
Sbjct: 198 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYHPDQEPNDIALIGEGVRKVYEEV 257

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     I+ E G  ++     L T V    E  +  + VD+S    +   +     
Sbjct: 258 LTSAGLGQVKIFTELGRFMLAPHGALVTRVTHKKETYRTYLGVDASAVNLMRPAMYGAYH 317

Query: 279 A--TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
               +    GP     V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HISNVTHPDGPAEVVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                   +   +G  + IR      DY+  L
Sbjct: 378 AKLRAAEILYTEEGKARQIRRAERPEDYFATL 409


>gi|149012433|ref|ZP_01833464.1| diaminopimelate decarboxylase [Streptococcus pneumoniae SP19-BS75]
 gi|169833320|ref|YP_001695331.1| diaminopimelate decarboxylase [Streptococcus pneumoniae
           Hungary19A-6]
 gi|194396976|ref|YP_002038560.1| diaminopimelate decarboxylase [Streptococcus pneumoniae G54]
 gi|147763489|gb|EDK70425.1| diaminopimelate decarboxylase [Streptococcus pneumoniae SP19-BS75]
 gi|168995822|gb|ACA36434.1| diaminopimelate decarboxylase [Streptococcus pneumoniae
           Hungary19A-6]
 gi|194356643|gb|ACF55091.1| diaminopimelate decarboxylase [Streptococcus pneumoniae G54]
          Length = 416

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 61/392 (15%), Positives = 112/392 (28%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   SS  
Sbjct: 19  PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78

Query: 62  EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++    +  G E    +    D E         TI  +    +   +  A        
Sbjct: 79  ELLMSHKLDFLGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERVAGIPEIISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN---- 169
                 V      + D     ++ G            ++ +     GL            
Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGLHSFLASNTVTHL 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                   + +   +        +++I+L GGI    +     +    + E   K   + 
Sbjct: 198 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEPNDIALIGEGVRKVYEEV 257

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     I+ E G  ++     L T V    E  +  + VD+S    +   +     
Sbjct: 258 LTSAGLGQVKIFTELGRFMLAPHGALVTRVTHKKETYRTYLGVDASAVNLMRPAMYGAYH 317

Query: 279 A--TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
               +    GP     V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HISNVTHPDGPAEAVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                   +   +G  + IR      DY+  L
Sbjct: 378 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 409


>gi|284051896|ref|ZP_06382106.1| diaminopimelate decarboxylase [Arthrospira platensis str. Paraca]
 gi|291567171|dbj|BAI89443.1| diaminopimelate decarboxylase [Arthrospira platensis NIES-39]
          Length = 463

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 50/399 (12%), Positives = 112/399 (28%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P Y++D+  +           +        +L A K +    +   +     GT   S
Sbjct: 53  GSPLYILDEVTVRTACRQYREAWEKYYPGESLILYASKAWNCLAVCAIVASEGLGTDVVS 112

Query: 60  LYEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKL--- 114
             E+          +    +   K      +  +    ++ +    L    + A ++   
Sbjct: 113 GGELYTANMAGVSPDKIYLHGNNKSRSELELAISTGCTVVADNWLDLTNLVELADQMSVT 172

Query: 115 -HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNN 166
              ++ +R  P +              S+ G       E              G+  H  
Sbjct: 173 SPVRVMIRFTPGIECHTHEYIRTGHLDSKFGFDPNQLDEVFKFVSSNPSLCCEGIHAHIG 232

Query: 167 CENKSFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL----- 218
            +            +L +   +   +   I  +++GGG+     +       +       
Sbjct: 233 SQIFELQPHQDLAGVLMDAVTKGSQYGLNITEVNVGGGLGIRYTEDDDPPSIESWVSAIA 292

Query: 219 ------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVP 270
                  E  +    ++  EPG +I+        T+    E       +     +  +  
Sbjct: 293 SSVVAACEQRQIPLPKLLCEPGRSIIGPAAITAYTIGSRKEIPDMRTYIAVDGGMSDNPR 352

Query: 271 DYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAG 325
                     +  N        T  V G+ C +GDI  +        + GD +       
Sbjct: 353 PITYQSVYRVVIANRMSAPLTETITVAGKHCESGDILIQQAHLPGDCQTGDILVVMATGA 412

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           YN +  + +N +  P   + N   +   I+  +Y+D   
Sbjct: 413 YNYSMASNYNRLPRPAAVLVNEGISTIIIQRETYSDLIR 451


>gi|222479105|ref|YP_002565342.1| diaminopimelate decarboxylase [Halorubrum lacusprofundi ATCC 49239]
 gi|222452007|gb|ACM56272.1| diaminopimelate decarboxylase [Halorubrum lacusprofundi ATCC 49239]
          Length = 453

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 61/405 (15%), Positives = 112/405 (27%), Gaps = 50/405 (12%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D  ++  N +       +A V+   A+K      + + + +       +S  E
Sbjct: 35  GTPLYVQDLDRVRENSERLREAFPDADVR--YAVKAHTGRAVLEAVREAGLDAECASAGE 92

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLNKFKDKAQKLH 115
           V       FGG+   Y            +          TI    V  L++  ++     
Sbjct: 93  VDRALAAGFGGDRLHYTAVNPPARDLDYVVGVAEAEPDLTITVGAVDTLDRLAER--GYD 150

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-----IESEIKNVNGLMFHNNCENK 170
            ++ +R+NP V              ++ G             +E  +V G+  H      
Sbjct: 151 GRVCVRVNPGVGAGHHEKVRTGGA-AKFGIPYDRAAEATRDAAERFDVVGIHAHAGSGID 209

Query: 171 SFLCFSAMLKNIEKE-FGHFI----------TQIEWISLGGGIHFTDKDY----PVKDFC 215
                S              +            IE++ +GGG     K+      +    
Sbjct: 210 PDQLDSHREMVTRMGGLARDLTDPDEGGVAPVDIEYVDVGGGFGVPYKEDAPALDLPAVA 269

Query: 216 QRLKEFSEKYS--VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDY 272
           +  +E        V + +EPG  +V +   L T V  +       V+ VD+ +   +   
Sbjct: 270 EATREAVAPLPAGVDLAIEPGRYVVADAGVLLTRVNTVKPTPDERVVGVDAGMTDLLRPA 329

Query: 273 LLYQESATIYPNTGPY---------------TAMVCGRSCLAGDIFGEFHFEKPVKIGDR 317
           +            G                    V G  C  GD             GD 
Sbjct: 330 MYDAYHPIRNLGGGRESDGSDAPAIDDRSATPVTVAGPICETGDTLCTDRALADPVRGDL 389

Query: 318 ISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
           ++      Y       +N    P     +        R  + +D 
Sbjct: 390 LAVGIAGAYGYEMATQYNSRPRPPEVALDDGTAAIVRRRETLDDL 434


>gi|325298093|ref|YP_004258010.1| diaminopimelate decarboxylase [Bacteroides salanitronis DSM 18170]
 gi|324317646|gb|ADY35537.1| diaminopimelate decarboxylase [Bacteroides salanitronis DSM 18170]
          Length = 386

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 64/366 (17%), Positives = 120/366 (32%), Gaps = 26/366 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTAL-YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           ++TP+Y  +   L   L+       K     +  A+K  A   +   + +   G    S 
Sbjct: 13  VETPFYYYNADLLRETLNVIRTEAGKYNKFCVHYAIKANANPKILGIIRESGLGVDCVSG 72

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115
           +E+       F      +    K  +   +  + D   FN  +V +L      A  +   
Sbjct: 73  WEIEAAIQAGFPASKIVFAGVGKTDKEINLALDHDIFCFNVESVPELEVINQLAAGKNKI 132

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE 168
            ++  RINP V              ++ G             +E       GL FH   +
Sbjct: 133 ARVAFRINPDVGAHTHANITTGLAENKFGISMQDMDKVIDRALEMNHVKFVGLHFHIGSQ 192

Query: 169 NKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
                 F A+   + +           +E I++GGG+         +      + F+  +
Sbjct: 193 ILDMGDFIALCNRVNELQEKLYARQIIVEHINVGGGLGIDYAHPNRQSIPDFAEYFATYH 252

Query: 226 SV-------QIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL--Y 275
                     ++ E G ++V    +L T V+ + +   K   IVD+ +   +   L   Y
Sbjct: 253 KHLKLRPQQTLHFELGRSVVGQCGSLITRVIYVKQGTNKQFAIVDAGMTDLIRPALYQAY 312

Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
            +   I       T  V G  C + D+FG+         GD ++      Y     + +N
Sbjct: 313 HKIENISSEEPVETYDVVGPICESSDVFGKAIDLNRTHRGDFLALRSAGAYGEIMASGYN 372

Query: 336 GINMPT 341
              +P 
Sbjct: 373 CRPLPK 378


>gi|255656024|ref|ZP_05401433.1| diaminopimelate decarboxylase [Clostridium difficile QCD-23m63]
 gi|296450547|ref|ZP_06892301.1| diaminopimelate decarboxylase [Clostridium difficile NAP08]
 gi|296879331|ref|ZP_06903326.1| diaminopimelate decarboxylase [Clostridium difficile NAP07]
 gi|296260622|gb|EFH07463.1| diaminopimelate decarboxylase [Clostridium difficile NAP08]
 gi|296429874|gb|EFH15726.1| diaminopimelate decarboxylase [Clostridium difficile NAP07]
          Length = 430

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 65/399 (16%), Positives = 122/399 (30%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           +TP Y+ D+  +  N    +   +      K+  A K F    M + +N+        S 
Sbjct: 29  QTPLYVFDEALVRQNCREYIKYFRAREGKNKVAYAGKAFLPLYMCNLINEEQMCLDVVSG 88

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+       F  E   ++   K  E   +         + +   +L+  +   +     
Sbjct: 89  GELYTAYKSNFPMEKVFFHGNNKTKEEINMGLDLGVGKFVVDNFYELDLLEALCEDKGKT 148

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           ++I  RI P +           +  S+ G            +   + +   + GL  H  
Sbjct: 149 QEIYFRITPGIEAHTHDYIKTGQIDSKFGFALVNGDLFRAIEKLSDYKNIKLVGLHAHIG 208

Query: 167 CENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            +             M+  +++    F   +  I LGGG+     +       +   E  
Sbjct: 209 SQIFDVEPYIDTVDIMMNLVKEIKEKFNIHLTEIDLGGGVGVYYSEGDKPKTIKEFCETI 268

Query: 223 EKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
              +             + +EPG +IV N  +   TV  I +     V V     +  +V
Sbjct: 269 ITKAETSCKELGIEVPTLVIEPGRSIVANAGSTLYTVGSIKDIKDVRVYVSVDGGMTDNV 328

Query: 270 PDYLLYQESATIYPNTGPYTAM----VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L          N   + AM    + G+ C +GDI         +K GD +       
Sbjct: 329 RPSLYQASYECSIVNKINHKAMNHVTIAGKCCESGDILIGDINIMDIKSGDILITTSTGA 388

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  + +N I    +            +  SY D   
Sbjct: 389 YGYSMSSNYNKIPRAAVVSVFDGNDKIICKRQSYEDLLA 427


>gi|195940484|ref|ZP_03085866.1| diaminopimelate decarboxylase [Escherichia coli O157:H7 str.
           EC4024]
          Length = 420

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 57/398 (14%), Positives = 118/398 (29%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIVREKIAALHQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHE-KFGG----ETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                 F      +   +     D    A +      +   +V  L +    +     ++
Sbjct: 82  RALAAGFDPKADSDAIVFTADLIDDATLARVHELQIPVNAGSVDMLEQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LRINP   +      +     S+ G          + ++     + G+  H       +
Sbjct: 140 WLRINPGFGHGHSQKTNTGGENSKHGIWYADMPAALEVLQRYNLKLVGIHMHIGSGVD-Y 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                +   + ++   F   +E IS GGG+               Y       R    + 
Sbjct: 199 GHLEQVCGAMVRQVIDFGQDLEAISAGGGLSIPYREGEEAIDTDHYYGLWSAARDSIAAH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATI 281
             ++V++ +EPG  +V     L   V  +     ++ V++D+     +   +        
Sbjct: 259 LGHAVKLEIEPGRFLVAEAGVLVAQVRSVKEMGSRHFVLIDAGFNDLMRPSMYGSYHHIT 318

Query: 282 --------YPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     N      +V G  C +GD+F        E      VK GD +   D   Y
Sbjct: 319 ALAADGRDLLNAPRIETVVAGPLCESGDVFTQQEGGKVETRSLPEVKPGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    + +        R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGVARLIRRRQTIQELLA 416


>gi|291295185|ref|YP_003506583.1| diaminopimelate decarboxylase [Meiothermus ruber DSM 1279]
 gi|290470144|gb|ADD27563.1| diaminopimelate decarboxylase [Meiothermus ruber DSM 1279]
          Length = 393

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 50/369 (13%), Positives = 112/369 (30%), Gaps = 19/369 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+Y  D   +   L+           ++  A+K     G+     +      + SL E
Sbjct: 26  ETPFYAYDWPTIQERLERLQKAFPQT--EIFYAIKANPRLGLLKRFLERGVFVEAVSLGE 83

Query: 63  VMLGHEKF--GGETHAYNVAYKDCEIDA-VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           V+  ++      E            ++A        +  ++++ L +          ++ 
Sbjct: 84  VLRAYQAGFRRNEVLLNGPVKTPAMLEALNRIGLPMLGLDSLADLERASRL--LPRARVL 141

Query: 120 LRINPSVSYSKFILADPNRPFSRLGE------KCKDKIESEIKNVNGLMFHNNCENKSFL 173
           LR+NP +           R  S+ G          +        V GL  H     +   
Sbjct: 142 LRVNPDLPIVTHDHLATGRGESKFGILPEEVGPALELARRSRLEVLGLHIHLGSALEHPE 201

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
            + A  + ++  +           +            +     +    + K+  ++++EP
Sbjct: 202 DYQAGYRVMDGLYRTHGP----FEVMNLGGGFGLGLDLGALGAQAAALAHKHGAELWIEP 257

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY--TAM 291
           G  +V     L T         +N +++D+ +   +   L             P   T  
Sbjct: 258 GRYLVAEAGVLVTRCWGTKRTRRNYLLIDAGMSQLIRPMLYGAIHPVEPLYHNPRQATYD 317

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
           + G +C +GD+          + GD ++      Y  +  + +     P   +    G  
Sbjct: 318 LAGPACESGDVLARDITLPEPREGDLLAILQAGAYAGSMSSNYLDTPRPLELLWTGQGWE 377

Query: 352 KAIREFSYN 360
              R  S+ 
Sbjct: 378 VIRRRQSWE 386


>gi|15901801|ref|NP_346405.1| diaminopimelate decarboxylase [Streptococcus pneumoniae TIGR4]
 gi|111658864|ref|ZP_01409485.1| hypothetical protein SpneT_02000035 [Streptococcus pneumoniae
           TIGR4]
 gi|14973485|gb|AAK76045.1| diaminopimelate decarboxylase [Streptococcus pneumoniae TIGR4]
 gi|301802655|emb|CBW35421.1| pyridoxal-dependent decarboxylase [Streptococcus pneumoniae INV200]
 gi|332199292|gb|EGJ13370.1| pyridoxal-dependent decarboxylase, C-terminal sheet domain protein
           [Streptococcus pneumoniae GA41317]
          Length = 416

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 61/392 (15%), Positives = 113/392 (28%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   SS  
Sbjct: 19  PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78

Query: 62  EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++    +  G E    +    D E         TI  +    +   +  A        
Sbjct: 79  ELLMSHKLDFLGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERVAGIPEIISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169
                 V      + D     ++ G       E+         +   ++  L  +     
Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                   + +   +        +++I+L GGI          +    + E   K   + 
Sbjct: 198 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYHPDQEPNDIALIGEGVRKVYEEV 257

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     I+ E G  ++     L T V    E  +  + VD+S    +   +     
Sbjct: 258 LTSAGLGQVKIFTELGRFMLAPHGALVTRVTHKKETYRTYLGVDASAVNLMRPAMYGAYH 317

Query: 279 A--TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
               +    GP     V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HISNVTHPDGPAEVVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                   +   +G  + IR      DY+  L
Sbjct: 378 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 409


>gi|271501924|ref|YP_003334950.1| diaminopimelate decarboxylase [Dickeya dadantii Ech586]
 gi|270345479|gb|ACZ78244.1| diaminopimelate decarboxylase [Dickeya dadantii Ech586]
          Length = 420

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 52/398 (13%), Positives = 118/398 (29%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +  D   ++  +             +  A K  +   +   + Q      S SL E+ 
Sbjct: 27  PLWAYDAATIVERIGQLRQFD-----TIRFAQKACSNLHILALMRQQGVKVDSVSLGEIE 81

Query: 65  LGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                            +     D      +      +   ++  L++  +++      +
Sbjct: 82  RALAAGFEPGTDAHEIVFTADVLDDATLQRVHELAIPVNAGSIDMLHQLGERS--PGHPV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172
            LRINP   +      +     S+ G    D  ++          + G+  H       +
Sbjct: 140 WLRINPGFGHGHSQKTNTGGENSKHGIWYADLPQALEALSRYHLKLVGIHMHIGSGVD-Y 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSEK---- 224
                + + + ++       +E IS GGG+             + +     +  E+    
Sbjct: 199 RHLEQVCEAMVQQVLAVGQDLEAISAGGGLSIPYHHGGERIDTQHYYGLWNQARERIAAH 258

Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATI 281
             + V + +EPG  +V  +  L   V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVALEIEPGRFLVAESGVLVAQVRAVKDMGSRHFVLVDAGFSDLMRPAMYGSYHHIT 318

Query: 282 Y--------PNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                      +     +V G  C +GD+F        E       ++GD + F D   Y
Sbjct: 319 LLPGDGRDLSQSPRRDTVVAGPLCESGDVFTQQAGGGVETMALPSAQVGDYLVFHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    +          R  + ++   
Sbjct: 379 GASMSSNYNSRPLIAEVLFEQGQPRLIRRRQTLDELLA 416


>gi|325188030|emb|CCA22573.1| diaminopimelate decarboxylase putative [Albugo laibachii Nc14]
          Length = 423

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 56/396 (14%), Positives = 118/396 (29%), Gaps = 33/396 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  L D++ + +N    +   +      +   A+K      +   L+Q   G   SS 
Sbjct: 21  GTPLQLYDEKSIRDNARHLIDTFRRNFTDFREYFAVKALPNPAIIKILHQEGCGMDCSST 80

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDK--AQKLHK 116
            E+ +  E    G+   +   +   E  A+       I  + ++ ++   +         
Sbjct: 81  AELHICKELGIEGKDIIFTSNFTSKEDLAIAYDQKVIINLDDITLVDALVEIRGKCPDLI 140

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENK 170
              L      + S+ +      P ++ G      +E+  K         G+         
Sbjct: 141 SFRLNPGLGRTDSETVSNILGGPDAKFGVAPFQIVEAYRKAKQAGAKRFGIHMMTGSCVM 200

Query: 171 SFLCFSAM----LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226
               +       +  +++       + E+++LGGG+    +        + +     +  
Sbjct: 201 DQDYWRQTVTILIDTVDQLRRELNIEFEFVNLGGGLGIPYQPDEKPVDIESISRMLRQLF 260

Query: 227 ------------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLL 274
                        Q+ +E G  +      L T    I E+      VD+ +   +   + 
Sbjct: 261 DEAKVKHNLSVLPQLCMENGRYMTGPFGWLITRCQAIKESYGRYYGVDACMANLMRPGMY 320

Query: 275 YQESATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                   P    +     + V G  C   D F +       ++GD     D   +  + 
Sbjct: 321 NSYHHITIPARESSEERSPSHVVGTLCENNDWFAKNRSLPKAQVGDLFVIHDTGAHAHSM 380

Query: 331 KNWFNGINMPTIAVKNVDGT-IKAIREFSYNDYYNN 365
              +NG       +   DGT        +Y   Y N
Sbjct: 381 GFQYNGKLRAPELLILHDGTPFVIRERETYKSLYGN 416


>gi|89255705|ref|YP_513066.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           holarctica LVS]
 gi|167009944|ref|ZP_02274875.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           holarctica FSC200]
 gi|254367082|ref|ZP_04983116.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           holarctica 257]
 gi|89143536|emb|CAJ78713.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           holarctica LVS]
 gi|134252906|gb|EBA52000.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           holarctica 257]
          Length = 389

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 61/372 (16%), Positives = 118/372 (31%), Gaps = 35/372 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           TP Y+ D + L +    A           ++  A+K      +     +Y  G    S  
Sbjct: 23  TPCYIYDLELLEDTFLNAKKSLDKNFKNAEIHYAIKANHNPKIVGIAKKYGMGIDCVSGG 82

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK--FKDKAQKLHKK- 117
           E+    E K   +   +           +  + D   FN+ S          AQ+ +K+ 
Sbjct: 83  EIKRALEQKVDSQHIVFAR-----FEIELAIDNDIFAFNSESLEEIQVINQIAQRKNKQV 137

Query: 118 -IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE--------IKNVNGLMFHNNCE 168
            I LR+NP++           +   + G    D +             N+ GL +H   +
Sbjct: 138 NICLRVNPNIDAQTHHYISTGQFDDKFGIAFVDILNWLKDEYRNFANINIIGLHYHVGSQ 197

Query: 169 NKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLK 219
             ++  F           K        I+ I+ GGG+                 +  R +
Sbjct: 198 ILNYQVFQSLAITTNEHIKLLRQNDINIKHINFGGGLGIDYQNPQQNPIVDFDGYFARFR 257

Query: 220 EFSEKYSVQI-YLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQE 277
           EF +     + + E G ++V  +  L + VL        + VI+D+ +   +   L   +
Sbjct: 258 EFFKYSDELVLHFELGRSLVGQSGVLVSQVLFNKVTQGTHFVIIDAGMTELIRPALYQAQ 317

Query: 278 S----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                             + G  C + D+F +++    +K GD ++      Y     + 
Sbjct: 318 HKIAALIDENINQKQHYHIVGPICESSDVFAKYYQLPKLKRGDLLAIYSAGAYGKVLASE 377

Query: 334 FNGINMPTIAVK 345
           +N          
Sbjct: 378 YNLRPSVQEYFI 389


>gi|95929053|ref|ZP_01311798.1| Orn/DAP/Arg decarboxylase 2 [Desulfuromonas acetoxidans DSM 684]
 gi|95134954|gb|EAT16608.1| Orn/DAP/Arg decarboxylase 2 [Desulfuromonas acetoxidans DSM 684]
          Length = 421

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 55/391 (14%), Positives = 120/391 (30%), Gaps = 34/391 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+++ D+  +    +    +     G +   A+K      +   + +   G   SS+ 
Sbjct: 23  GTPFHIYDEAGIRETGEHLKQVFSGIDGFREYFAVKALPNKQILKLMKEMNFGYDCSSIP 82

Query: 62  EVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+++  E     E   +       +    A       +  + +S ++K  +       ++
Sbjct: 83  ELIMSRELGADTEDIMFTSNNTSPEEFAFAEQDGGCILNLDDISLIDKVPN-----FPEL 137

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCE---- 168
                         +   N   ++ G   +  +++  K         GL           
Sbjct: 138 ICFRYNPGPRRTGNIIIGNPVEAKYGITHEQVVDAYRKAKERGATRFGLHTMVASNELDY 197

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK---- 224
                    +L   E        + E++++GGG                + +   +    
Sbjct: 198 TYMVETARMVLSLAELVKAELDIEFEFVNIGGGFGIPYNPDQAPLDIDTMAKEVTELFDA 257

Query: 225 ------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                 +  ++Y+E G  +      L T  ++  +  +N + VDS + A +   L     
Sbjct: 258 FKTKNGFVPRMYMESGRFMTGPHGCLVTRAINHKDTYRNYIGVDSCMSALMRPALYEAYH 317

Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                         T  V G  C   D F        +  GD +   D   +       +
Sbjct: 318 HIDVVGKDNAPKEMTYDVVGSLCENNDKFAVQRELPKIDEGDLLVIHDSGAHGHAMGFQY 377

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG   P   +   DG+++ IR   + +DY+ 
Sbjct: 378 NGRLRPQELLLRCDGSVELIRRAETVDDYFA 408


>gi|115314200|ref|YP_762923.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           holarctica OSU18]
 gi|156501657|ref|YP_001427722.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|290953447|ref|ZP_06558068.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295313328|ref|ZP_06803951.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           holarctica URFT1]
 gi|115129099|gb|ABI82286.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           holarctica OSU18]
 gi|156252260|gb|ABU60766.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           holarctica FTNF002-00]
          Length = 389

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 61/372 (16%), Positives = 118/372 (31%), Gaps = 35/372 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           TP Y+ D + L +    A           ++  A+K      +     +Y  G    S  
Sbjct: 23  TPCYIYDLELLEDTFLNAKKSLDKNFKNAEIHYAIKANHNPKIVGIAKKYGMGIDCVSGG 82

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK--FKDKAQKLHKK- 117
           E+    E K   +   +           +  + D   FN+ S          AQ+ +K+ 
Sbjct: 83  EIKRALEQKVDSQHIVFAG-----FEIELAIDNDIFAFNSESLEEIQVINQIAQRKNKQV 137

Query: 118 -IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE--------IKNVNGLMFHNNCE 168
            I LR+NP++           +   + G    D +             N+ GL +H   +
Sbjct: 138 NICLRVNPNIDAQTHHYISTGQFDDKFGIAFVDILNWLKDEYRNFANINIIGLHYHVGSQ 197

Query: 169 NKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLK 219
             ++  F           K        I+ I+ GGG+                 +  R +
Sbjct: 198 ILNYQVFQSLAITTNEHIKLLRQNDINIKHINFGGGLGIDYQNPQQNPIVDFDGYFARFR 257

Query: 220 EFSEKYSVQI-YLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQE 277
           EF +     + + E G ++V  +  L + VL        + VI+D+ +   +   L   +
Sbjct: 258 EFFKYSDELVLHFELGRSLVGQSGVLVSQVLFNKVTQGTHFVIIDAGMTELIRPALYQAQ 317

Query: 278 S----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                             + G  C + D+F +++    +K GD ++      Y     + 
Sbjct: 318 HKIAALIDENINQKQHYHIVGPICESSDVFAKYYQLPKLKRGDLLAIYSAGAYGKVLASE 377

Query: 334 FNGINMPTIAVK 345
           +N          
Sbjct: 378 YNLRPSVQEYFI 389


>gi|238764774|ref|ZP_04625716.1| Diaminopimelate decarboxylase [Yersinia kristensenii ATCC 33638]
 gi|238696972|gb|EEP89747.1| Diaminopimelate decarboxylase [Yersinia kristensenii ATCC 33638]
          Length = 420

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 53/398 (13%), Positives = 120/398 (30%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +  D + +   ++   +        +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWAYDGEVITQKINQLRHFDV-----IRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
              +             +     D      ++  +  +   ++  L++    A      +
Sbjct: 82  RALQAGFLPGQEPAEIVFTADLLDHATLLRVTELNIPVNAGSIDMLDQLGQHA--PGHPV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G   +D       I+     + G+  H       +
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHEDLTQAIEKIQQYGLTLVGIHMHIGSGVD-Y 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-------- 224
                +   + ++       I  IS GGG+    +    +   +       +        
Sbjct: 199 QHLEQVCDAMVQQVIALGQDISAISAGGGLSIPYQFGDDEIDTEHYYGLWNRAREKIAAY 258

Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             ++V + +EPG  +V  +  L   V  + +   ++ V+VD+     +   +        
Sbjct: 259 LGHAVSLEIEPGRFLVAESGVLIAQVRAVKNMGSRHYVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIFG-------EFHFEKPVKIGDRISFEDVAGY 326
                  +         +V G  C +GD+F        E       KIGD + F D   Y
Sbjct: 319 LLPADGRLLAGEPLIDTVVAGPLCESGDVFTQEAGGGLETRALPAAKIGDYLVFHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    +          R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFEQGQPRLIRRRQTIEELIA 416


>gi|229827756|ref|ZP_04453825.1| hypothetical protein GCWU000182_03148 [Abiotrophia defectiva ATCC
           49176]
 gi|229787955|gb|EEP24069.1| hypothetical protein GCWU000182_03148 [Abiotrophia defectiva ATCC
           49176]
          Length = 418

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 67/393 (17%), Positives = 123/393 (31%), Gaps = 30/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+++ D++ +  N          N G K   A+K      +   L +   GT  SSL 
Sbjct: 20  PTPFHIYDEKGIRENARNLKKAFSWNKGFKEYFAVKATPNPYILSILKEEGCGTDCSSLT 79

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+M+       GE   ++       E          I  + ++ ++  K+ A    K I 
Sbjct: 80  ELMMSEACGITGENIMFSSNVTPAEEYVKARELGAIINLDDITHIDFLKECAGIPEK-IS 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES----EIKNVN--GLMFHNNCEN---- 169
            R NP   +        N   ++ G       E+    +   V   G+            
Sbjct: 139 CRYNPGGVFKVSNDIMDNPGDAKYGMTKVQMFEAFTRLKELGVKEFGIHSFLVSNTVTND 198

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
              +  + + K   +        I +I+L GG+    +     +    + E   K   +I
Sbjct: 199 YYPMLAAELFKLATELKEKCDVHISFINLSGGVGIPYRPEQEANDIFVIGEGVRKAFEEI 258

Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                      + E G  ++     L T  +      K  + VD+     +   +     
Sbjct: 259 LVPSGMGDVSIFTELGRFMLAPFGHLVTKAVHEKHIYKEYIGVDACAANLMRPAMYGAYH 318

Query: 279 ATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                    +   +   V G  C   D F        + +GD +   D   +       +
Sbjct: 319 HITVLGKEADKAEFKYDVTGSLCENNDKFAIDRMLPKIDMGDYLVIHDTGAHGFAMGYNY 378

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       +K  +G +K IR   +  DY+  L
Sbjct: 379 NGRLRSAELLKTENGEVKLIRRAETPMDYFATL 411


>gi|322831543|ref|YP_004211570.1| diaminopimelate decarboxylase [Rahnella sp. Y9602]
 gi|321166744|gb|ADW72443.1| diaminopimelate decarboxylase [Rahnella sp. Y9602]
          Length = 419

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 53/398 (13%), Positives = 117/398 (29%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +  D + +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWAYDAEIIKQRIAQLRQFDV-----IRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGH-EKFGG----ETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                 F          +     D      ++  D  +   ++  L++      K    +
Sbjct: 82  RALVAGFIPGGTDSEIVFTADVLDQPTLERVTALDIPVNAGSIDMLSQIGQ--HKAGHPV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G    D  ++  +       + G+  H       +
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYADLPQALTEIARYGLKLVGIHMHIGSGVD-Y 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK---- 224
                +   + ++       IE IS GGG+               +        E+    
Sbjct: 199 GHLEQVCDAMVRQVIETGHDIEAISAGGGLSIPYHFEEESIDTGHYFGLWNRAREQIAAH 258

Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATI 281
             + +++ +EPG  +V  +  L   +  + +   ++ V+ D+     +   +        
Sbjct: 259 LGHEIKLEIEPGRFLVAESGVLVAQIRAVKNMGSRHFVLCDAGFNDLMRPAMYGSYHHIS 318

Query: 282 YPNTGPYTA--------MVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                            ++ G  C +GD+F        E     PV IGD + F D   Y
Sbjct: 319 LLPADGRDVSGQPLTDSVIAGPLCESGDVFTQQAGGGVETFPLPPVHIGDYLVFHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    +          R  +  +   
Sbjct: 379 GASMSSNYNTRPLLPEVLFENGVPRLIRRRQTVEELIA 416


>gi|307707662|ref|ZP_07644142.1| diaminopimelate decarboxylase [Streptococcus mitis NCTC 12261]
 gi|307616274|gb|EFN95467.1| diaminopimelate decarboxylase [Streptococcus mitis NCTC 12261]
          Length = 416

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 61/392 (15%), Positives = 116/392 (29%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   SS  
Sbjct: 19  PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78

Query: 62  EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++ H+  F G    ++     D E         TI  +    +   +  A        
Sbjct: 79  ELLMSHKLNFPGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERAAGIPEIISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169
                 V      + D     ++ G       E+         +   ++  L  +     
Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                   + +   +        +++I+L GGI    +     +    + E   K   + 
Sbjct: 198 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEPNDIALIGEGVRKVYEEV 257

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     I+ E G  ++     L T V    +  +  + VD+S    +   +     
Sbjct: 258 LTPAGLGQVKIFTELGRFMLAPHGALVTRVTHKKKTYRTYLGVDASAVNLMRPAMYGAYH 317

Query: 279 A--TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
               +    GP     V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HITNLTHLEGPAEVVDVVGSLCENNDKFAVNRELPHTEIGDLLIIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                   +   +G  + IR      DY+  L
Sbjct: 378 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 409


>gi|309790697|ref|ZP_07685248.1| diaminopimelate decarboxylase [Oscillochloris trichoides DG6]
 gi|308227291|gb|EFO80968.1| diaminopimelate decarboxylase [Oscillochloris trichoides DG6]
          Length = 445

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 56/399 (14%), Positives = 119/399 (29%), Gaps = 37/399 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKN---AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           TP Y+ID+  L   +    +       A  ++  A K      +     Q   G    S 
Sbjct: 34  TPLYIIDEVTLRGAMRAYRHALARHYPAPSRVHYASKALLNIAVAQVAQQEGLGLDLVSA 93

Query: 61  YEVMLGH-EKFGG-ETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+++           H +  A  D E   A+      ++ + + +L +    +      
Sbjct: 94  AELLVARRAGVDMTSIHLHGNAKSDAELHRALDWGVGAVVVDNLDELERLIALSAGHPQP 153

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG-------EKCKDKIESEIKNVNGLMFHNNCE 168
           + + LR+ P ++             ++ G          +  + +   ++ GL  H   +
Sbjct: 154 QPVLLRVAPDIAAHTHAHIATGAADAKFGFPLAALPVAIERILAAPGLHLRGLHAHIGSQ 213

Query: 169 NKSF----LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ-------- 216
                        ++  + +    +   +E +S GGG+     D                
Sbjct: 214 IFELGQLAATVQVLVAALAQIRAQYGVTLEELSPGGGLGVPYTDAMPATDIDGYAQALAA 273

Query: 217 ---RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN---LVIVDSSVEAHVP 270
              +           + +EPG +I+         V+            + VD  +  ++ 
Sbjct: 274 ATQQACAAHNFPLPLLTVEPGRSIIARAGVALYRVVARKFAADGRLLYLHVDGGMADNIR 333

Query: 271 DYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
             L       +  N           V GR C +GDI          ++GD ++      Y
Sbjct: 334 PALYAARYTALLANRADAPPTAPVSVAGRYCESGDILLRDAPLPAAQLGDVLAVAGAGAY 393

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            ++  + +N    P + + N        R  +  D    
Sbjct: 394 TLSMASTYNMSPRPALLLLNAGQVQVIQRRETEEDLLAR 432


>gi|302346264|ref|YP_003814562.1| diaminopimelate decarboxylase [Prevotella melaninogenica ATCC
           25845]
 gi|302150973|gb|ADK97234.1| diaminopimelate decarboxylase [Prevotella melaninogenica ATCC
           25845]
          Length = 385

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 67/365 (18%), Positives = 122/365 (33%), Gaps = 26/365 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           I+TP+Y  D   L   L      ++K     +  A+K  A   + + + Q   G    S 
Sbjct: 13  IETPFYYYDCDLLRETLQAINKELKKYENFIVHYAIKANANAKVLNVIQQTGMGADCVSG 72

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115
            E+    +  F  +   Y    K      +  + D   FN  +V++L    + A  +   
Sbjct: 73  GEIQRCLDCGFPADKIVYAGVGKSDWEINLGLDHDIFCFNVESVAELEVINELAAKKGKT 132

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGE-------KCKDKIESEIKNVNGLMFHNNC- 167
             +  RINP V              ++ G           +       +  GL FH    
Sbjct: 133 ANVCFRINPDVGAHTHEKITTGLAENKFGIAMQDMLPTILEASRMSNIHFIGLHFHIGSQ 192

Query: 168 --ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-- 223
             E   F    + +  I+        +I+ I++GGG+     +            F    
Sbjct: 193 LLEMTDFRHLCSRINEIQDGLEQENIKIKNINVGGGLGIDYDNPDNHPIPDFKSYFYTFA 252

Query: 224 -----KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLY-- 275
                +   +++ E G A+V    +L T  L + +   K   IVD+ +   +   L    
Sbjct: 253 RYLKLREGQKLHFELGRAVVGQMGSLITRTLYVKQGTAKQFAIVDAGMTDLIRPALYQAS 312

Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
            +   +  +   +   V G  C + D+F +      V  GD I+      Y     + +N
Sbjct: 313 HKIENLSNDGALHAYDVVGPICESSDVFAKEIELNTVHRGDLIAMRSAGAYGEIMASQYN 372

Query: 336 GINMP 340
              +P
Sbjct: 373 CRKLP 377


>gi|307709729|ref|ZP_07646180.1| protein tabA [Streptococcus mitis SK564]
 gi|307619431|gb|EFN98556.1| protein tabA [Streptococcus mitis SK564]
          Length = 416

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 62/391 (15%), Positives = 115/391 (29%), Gaps = 29/391 (7%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           TP++L D++ +             N G K   A+K      +   L +   G   SS  E
Sbjct: 20  TPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYVE 79

Query: 63  VMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           +++ H+  F G    ++     D E         TI  +    +   +  A         
Sbjct: 80  LLMSHKLDFPGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERAAGIPEIISCR 139

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN----K 170
                V      + D     ++ G            ++ +  N  G+             
Sbjct: 140 YNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGANTFGIHSFLASNTVTHLY 198

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ-- 228
                  + +   +        +++I+L GGI    +     +    + E   K   +  
Sbjct: 199 YPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEPNDIALIGEGVRKVYEEVL 258

Query: 229 ---------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA 279
                    I+ E G  ++     L T V    E  +  + VD+S    +   +      
Sbjct: 259 TPAGLGQVKIFTELGRFMLAPHGALVTRVTHKKETYRTYLGVDASAVNLMRPAMYGAYHH 318

Query: 280 --TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
              +    GP     V G  C   D F         +IGD +   D   +  +    +N 
Sbjct: 319 ITNVTHPDGPAEVVDVVGSLCENNDKFAVNRELPHTEIGDLLIIHDTGAHGFSMGYQYNA 378

Query: 337 INMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                  +   +G  + IR      DY+  L
Sbjct: 379 KLRSAEILYTEEGKARQIRRAERPEDYFATL 409


>gi|152971771|ref|YP_001336880.1| diaminopimelate decarboxylase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238896361|ref|YP_002921097.1| diaminopimelate decarboxylase [Klebsiella pneumoniae NTUH-K2044]
 gi|150956620|gb|ABR78650.1| diaminopimelate decarboxylase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238548679|dbj|BAH65030.1| diaminopimelate decarboxylase [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 420

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 50/398 (12%), Positives = 117/398 (29%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAQLSQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        E   +     D      +      +   ++  L++  + +     ++
Sbjct: 82  RALAAGYDPQQNPEDIVFTADLIDDATLDRVKALQIPVNAGSIDMLSQLGEVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G          + +      + G+  H       +
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYSHLPAALEVMRRYQLQLVGIHMHIGSGVD-Y 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----------KDYPVKDFCQRLKEFS 222
                +   + ++   F   ++ IS GGG+                Y + +  +      
Sbjct: 199 GHLEQVCGAMVRQVVDFGQDLQAISAGGGLSIPYREGEEAIDTAHYYGLWNRAREQIAAH 258

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATI 281
             + V++ +EPG  +V  +  L + V  +     ++ V++D+     +   +        
Sbjct: 259 LGHPVKLEIEPGRFLVAESGVLVSQVRSVKEMGSRHFVLIDAGFNDLMRPAMYGSYHHIT 318

Query: 282 --------YPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                            +V G  C +GD+F        E      V  GD +   D   Y
Sbjct: 319 ALAGDGRDLSAAPQVETVVAGPLCESGDVFTQQEGGKVETRLLPAVAPGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    + +        R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFDGGKARLIRRRQTIQELLA 416


>gi|225861795|ref|YP_002743304.1| diaminopimelate decarboxylase [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298230174|ref|ZP_06963855.1| diaminopimelate decarboxylase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298254780|ref|ZP_06978366.1| diaminopimelate decarboxylase [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298503748|ref|YP_003725688.1| diaminopimelate decarboxylase [Streptococcus pneumoniae
           TCH8431/19A]
 gi|225728238|gb|ACO24089.1| diaminopimelate decarboxylase [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298239343|gb|ADI70474.1| possible diaminopimelate decarboxylase [Streptococcus pneumoniae
           TCH8431/19A]
 gi|327389142|gb|EGE87488.1| pyridoxal-dependent decarboxylase, C-terminal sheet domain protein
           [Streptococcus pneumoniae GA04375]
          Length = 416

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 61/392 (15%), Positives = 112/392 (28%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   SS  
Sbjct: 19  PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78

Query: 62  EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++    +  G E    +    D E         TI  +    +   +  A        
Sbjct: 79  ELLMSHKLDFLGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERVAGIPEIISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN---- 169
                 V      + D     ++ G            ++ +     GL            
Sbjct: 139 RYNPGGVFELGTDIMDNP-EEAKFGMTKDQLFEAFAILKEKGAKTFGLHSFLASNTVTHL 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                   + +   +        +++I+L GGI    +     +    + E   K   + 
Sbjct: 198 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEPNDIALIGEGVRKVYEEV 257

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     I+ E G  ++     L T V    E  +  + VD+S    +   +     
Sbjct: 258 LTSAGLGQVKIFTELGRFMLAPHGALVTRVTHKKETYRTYLGVDASAVNLMRPAMYGAYH 317

Query: 279 A--TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
               +    GP     V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HISNVTHPDGPAEAVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                   +   +G  + IR      DY+  L
Sbjct: 378 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 409


>gi|169628249|ref|YP_001701898.1| diaminopimelate decarboxylase LysA [Mycobacterium abscessus ATCC
           19977]
 gi|169240216|emb|CAM61244.1| Probable diaminopimelate decarboxylase LysA [Mycobacterium
           abscessus]
          Length = 448

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 55/398 (13%), Positives = 120/398 (30%), Gaps = 41/398 (10%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP Y++D++   +         +   +++  A K      +   + Q        S  E+
Sbjct: 51  TPAYVLDEEDFRHRARRYRSTLRE--IEVAYAGKALLTADIARWVAQEGLSLDVCSSGEL 108

Query: 64  MLGHEK-FGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
                  F  E    +      D   DA       I+ ++ +   +    A +L K+  +
Sbjct: 109 ATALAGGFDPERIIMHGNAKTPDELSDAAAVGVGRIVVDSYT---EIMFLATRLAKRQRV 165

Query: 121 --RINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCEN 169
             R+ P +               + G         E  +  ++  + N+ GL  H   + 
Sbjct: 166 LVRVTPDIDIHGHAAVTTGVTDQKFGFPLHEGHAIEAARRVLDQPLLNLVGLHCHIGSQV 225

Query: 170 KSF----LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
                       M+  +          +  +++GGG     +    +     L++F +  
Sbjct: 226 TDCALYGETIRRMIAAMADIRARHGVILGELNIGGGHGVPYRSGDPELDLAELRDFIDDA 285

Query: 226 -----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI------VDSSVEAH 268
                        ++ +EPG AI          V+ +               +  +    
Sbjct: 286 LDAACAAERFPRPRVVVEPGRAISARAGVTLYRVVSVKTQPGGRTFVAVDGGMSDNPRVS 345

Query: 269 VPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYN 327
           +         A  +P+  P    V GR C +GD           V+ GD ++      Y+
Sbjct: 346 LYSAKYSVALANRHPSAPPQLVTVAGRHCESGDEIARDVSLPSDVRPGDVLAVACTGAYH 405

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            +  + +N +  P +         + +R  +  D  + 
Sbjct: 406 HSMASSYNLVGRPPVVAVRDGRVRELVRRETIADLLSR 443


>gi|282881322|ref|ZP_06290002.1| diaminopimelate decarboxylase [Prevotella timonensis CRIS 5C-B1]
 gi|281304798|gb|EFA96878.1| diaminopimelate decarboxylase [Prevotella timonensis CRIS 5C-B1]
          Length = 392

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 70/364 (19%), Positives = 120/364 (32%), Gaps = 28/364 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALY-IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +TPYY  D Q L   LD       K+A  ++  ALK  A   +   ++Q   G    S  
Sbjct: 14  QTPYYYYDTQLLHRTLDAIKRETDKHAHFEVHYALKANAHPQLLQQISQAGFGADCVSGG 73

Query: 62  EVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+       F      +       D    A+  +       ++ +L      A +  +  
Sbjct: 74  EITAALKAGFPANKIVFAGVGKRDDEIRLALQQHIFCFHVESLEELEVVNALAAQEQQVA 133

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
              LRINP+V              ++ G        +           + GL FH   + 
Sbjct: 134 RVALRINPNVGAHTHAHITTGLSENKFGIPLTQMNTAIDACSRLEHITLIGLHFHIGSQI 193

Query: 170 KSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYP-------VKDFCQRLK 219
                F +  + I   + E       + +I++GGG+     D            F    +
Sbjct: 194 TDMSDFVSECQRINELQTELNQHDIHLRYINVGGGLGVNYDDPDGGAIPDFQAYFDTFAQ 253

Query: 220 EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES 278
                    I+ E G ++V    +L + VL I E   K   I+D+ +   +    LYQ  
Sbjct: 254 HLHYTKEQTIHFELGRSVVAQCGSLISKVLYIKEGEHKKFCIIDAGMTELLRPA-LYQAH 312

Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
             I   +      T  V G  C + D+  +         GD ++      Y  +  + +N
Sbjct: 313 HKIENRSSQGALETYDVVGPICESSDVMAQGVLLPSCHRGDILAIRSAGAYGESMASQYN 372

Query: 336 GINM 339
           G  +
Sbjct: 373 GRPL 376


>gi|159896546|ref|YP_001542793.1| diaminopimelate decarboxylase [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159889585|gb|ABX02665.1| diaminopimelate decarboxylase [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 443

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 61/401 (15%), Positives = 127/401 (31%), Gaps = 38/401 (9%)

Query: 3   KTPYYLIDKQKLLN---NLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP YL+D + +         AL     + V +  A K     G+   ++    G    S
Sbjct: 41  GTPLYLLDAETIRTIAMRYSAALRHAYGSNVSIHYASKALLNVGVARLVHSLGLGLDVVS 100

Query: 60  LYEVMLGHEKFGGETHAYNVAYKDCEID---AVLSNCDTIIFNTVSQLNKFKDKA--QKL 114
             E+ +         H +         +   AV +    I+ + + QL    D    +  
Sbjct: 101 GGELAIAQRAGMPLDHVHLHGNGTPPAELAQAVEAGIGRIVVDNLDQLKWLADYCAKRPT 160

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHN 165
            + I LRI P V+             ++ G    D          +++   N+ GL  H 
Sbjct: 161 PQTILLRIAPDVTAGAHAHIRTGAASAKFGMPLDDGTAAEAVRLALQAPGLNLVGLHAHI 220

Query: 166 NCENKSFLCFSAMLKNIEKEFGHFITQIEW----ISLGGGIHFTDKDYPV--------KD 213
             + + +     M+  +         +  W     S GGG+                   
Sbjct: 221 GSQMRDWAALREMIGRLLAFADQQRRERSWLLTEFSPGGGLAVAYMPNEQAGDIETYANT 280

Query: 214 FCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAH 268
               ++   E+Y + +    +EPG ++V        +V          + + +D  +  +
Sbjct: 281 IANAVRLGCERYQIPLPRLIIEPGRSLVARAGVALYSVTGHKTVVGGSDYLHIDGGMGDN 340

Query: 269 VPDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
           +   L   +                  + GR C +GD+          ++G+ ++     
Sbjct: 341 LRPSLYNAQYTAALVARPCAPPIAPVQLAGRFCESGDVLIREVALPAAEVGELVAVPVAG 400

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            Y ++  + +NG+  P + + +    +   R  +Y D    
Sbjct: 401 AYTLSMASAYNGVPRPALVLLDRGQAMLIQRRETYADLMAR 441


>gi|307705628|ref|ZP_07642479.1| protein tabA [Streptococcus mitis SK597]
 gi|307620804|gb|EFN99889.1| protein tabA [Streptococcus mitis SK597]
          Length = 416

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 62/392 (15%), Positives = 116/392 (29%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   SS  
Sbjct: 19  PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78

Query: 62  EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++ H+  F G    ++     D E         TI  +    +   +  A        
Sbjct: 79  ELLMSHKLDFPGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERAAGIPEIISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169
                 V      + D     ++ G       E+         +   ++  L  +     
Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                   + +   +        +++I+L GGI    +     +    + E   K   + 
Sbjct: 198 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEPNDIALIGEGVRKVYEEV 257

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     IY E G  ++     L T V    +  +  + VD+S    +   +     
Sbjct: 258 LTPAGLGQVKIYTELGRFMLAPHGALVTRVTHKKKTYRTYLGVDASAVNLMRPAMYGAYH 317

Query: 279 A--TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
               +    GP     V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HITNVTHPDGPAEVVDVVGSLCENNDKFAVNRELPHTEIGDLLLIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                   +   +G  + IR      DY+  L
Sbjct: 378 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 409


>gi|295097387|emb|CBK86477.1| diaminopimelate decarboxylase [Enterobacter cloacae subsp. cloacae
           NCTC 9394]
          Length = 430

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 57/398 (14%), Positives = 118/398 (29%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 37  PVWVYDAQIVREKIAALHQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 91

Query: 65  LGHE-KFGG----ETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                 F      +   +     D    A +      +   +V  L +    +     ++
Sbjct: 92  RALAAGFDPKADSDAIVFTADLIDDATLARVHELQIPVNAGSVDMLEQLGQVS--PGHRV 149

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LRINP   +      +     S+ G          + ++     + G+  H       +
Sbjct: 150 WLRINPGFGHGHSQKTNTGGENSKHGIWYADMPAALEVLQRYNLKLVGIHMHIGSGVD-Y 208

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                +   + ++   F   +E IS GGG+               Y       R    + 
Sbjct: 209 GHLEQVCGAMVRQVIDFGQDLEAISAGGGLSIPYREGEEAIDTDHYYGLWSAARDSIAAH 268

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATI 281
             ++V++ +EPG  +V     L   V  +     ++ V++D+     +   +        
Sbjct: 269 LGHAVKLEIEPGRFLVAEAGVLVAQVRSVKEMGSRHFVLIDAGFNDLMRPSMYGSYHHIT 328

Query: 282 --------YPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     N      +V G  C +GD+F        E      VK GD +   D   Y
Sbjct: 329 ALAADGRDLVNAPRIETVVAGPLCESGDVFTQQEGGKVETRSLPEVKPGDYLVLHDTGAY 388

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    + +        R  +  +   
Sbjct: 389 GASMSSNYNSRPLLPEVLFDNGVARLIRRRQTIQELLA 426


>gi|86609104|ref|YP_477866.1| diaminopimelate decarboxylase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86557646|gb|ABD02603.1| diaminopimelate decarboxylase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 459

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 52/401 (12%), Positives = 110/401 (27%), Gaps = 39/401 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN---AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P Y++D+  L                 G ++L A K +    +     Q   G   +S
Sbjct: 49  GSPLYILDEWTLRRACQLYRDTWARCYAGGSRVLYATKAWNCLAICALALQEGLGLDVAS 108

Query: 60  LYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKK 117
             E+         GE    +   K  +   +       ++ +++ +L +           
Sbjct: 109 GGELYTALQAGAKGEDLYLHGNAKSLDELNLALETGCTLVVDSLYELQQVSALTTPARPA 168

Query: 118 IGL-RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCEN 169
             L R+NP +           +  S+ G       E              GL  H   + 
Sbjct: 169 RLLLRVNPGIDVHTHEYIRTGQTDSKFGIGQWQLPEVFDFLAAHPQLQCVGLHAHIGSQI 228

Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226
                   +   + + +         ++ +++GGG+     +           E      
Sbjct: 229 FDLQGHRDLAGVLAQIWRQGLGRGLPLQELNVGGGLGIRYIESDDPPSIPEWVETVATAV 288

Query: 227 VQIY-----------LEPGEAIVTNTTTLNTTVL--------DISENIKNLVIVDSSVEA 267
            Q +            EPG +++        T+         D     +  + +D  +  
Sbjct: 289 QQAFAQSGIPLPKVLCEPGRSVIGPAAVTAYTLGGQKRIPPSDDLPQGRTYITIDGGMSD 348

Query: 268 HVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323
           +              A            V G+ C +GD+  +         G+ +     
Sbjct: 349 NPRPITYQARYTALLANRPEAEATQRVTVAGKHCESGDVLLKDVLLPAPMAGEVLVVLAT 408

Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             YN +  + +N    P   + N       +R  +Y D   
Sbjct: 409 GAYNYSMASNYNRFPRPAAVLVNEGEAQLIVRRETYADLIR 449


>gi|322385932|ref|ZP_08059573.1| diaminopimelate decarboxylase [Streptococcus cristatus ATCC 51100]
 gi|321270047|gb|EFX52966.1| diaminopimelate decarboxylase [Streptococcus cristatus ATCC 51100]
          Length = 416

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 54/392 (13%), Positives = 116/392 (29%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             NA  K   A+K      +   L +   G   +S  
Sbjct: 19  PTPFHLYDEKGIRARARALHEAFAWNADFKEYFAVKATPNPAILKILKEEGCGVDCASYV 78

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+M+  +  F G+   ++       E          I  +    +   K+ A        
Sbjct: 79  ELMMSQKLGFAGDEIMFSSNNTPAEEFRLARELGANINLDAYEDVAFLKEVAGIPKVISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMF----HNNCEN 169
                 V      + D     ++ G      I++            G+      +    +
Sbjct: 139 RYNPGGVFELGTSIMDHP-EEAKFGMTKDQLIQAFKDLKELGAEKFGIHALLASNTVSND 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
                   + +   +       ++++I+L GG+    +    ++    + +   +   +I
Sbjct: 198 YYPALARQLFELAVEVVEATGVELDFINLSGGVGVNYQPEGEENDIMIIGQGVRQAYEEI 257

Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                      + E G  ++     L T V    +  +  + VD+S    +   +     
Sbjct: 258 LTPAGLGQVKIFTELGRFMLAPFGLLVTKVTHKKQTYRTYLGVDASAVNLLRPAMYGAYH 317

Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                +          V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HITNMDRTEGPTEIVDVVGSLCENNDKFAIQRELPVSQIGDTLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                +  +   +G  + IR      DY+  L
Sbjct: 378 AKLRSSEILLEENGQARMIRRAERPEDYFATL 409


>gi|206900405|ref|YP_002251079.1| diaminopimelate decarboxylase [Dictyoglomus thermophilum H-6-12]
 gi|206739508|gb|ACI18566.1| diaminopimelate decarboxylase [Dictyoglomus thermophilum H-6-12]
          Length = 425

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 56/390 (14%), Positives = 121/390 (31%), Gaps = 29/390 (7%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKN---AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           TP Y++DK  L    +T +   K       K+L A+K      +      +  G   S+ 
Sbjct: 33  TPLYILDKSTLSFQANTYMDSWKKYYKNNYKVLFAIKALPILEVIRIFKNHGLGALVSTG 92

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+ +        E   ++   K           N   +I +   +  K K     +   
Sbjct: 93  GELYIALSAGVSPENIYFHGNAKTLREIEYAIDQNIGALIIDNFDEYEKIKYLLSKKDAK 152

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCE 168
             + +RI P++  +        +  ++ G      +       + +     G+  H   +
Sbjct: 153 INVLVRIIPNIEVNTHRSIRTGQTDTKFGLPIDQALILIQKIKKEKNIIFKGIHSHIGSQ 212

Query: 169 NKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK- 224
                 +  + + + + +         +E +S+GGG+     +       + L       
Sbjct: 213 IFDISAYVKLSEVLSEVYNELKSQNIAVEEMSIGGGLGVAYTEEDNPPNIEDLAREVSNK 272

Query: 225 ------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLYQ 276
                 ++  +  EPG ++V         +    E       V     +  ++   L   
Sbjct: 273 FKETIGHNFTLICEPGRSLVGRAGITLYRIESRKELPNIRKYVSVDGGMSDNIRPSLYGA 332

Query: 277 ESA--TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
           + +   I  N       + G+ C +GDI  +         GD +       YN +   W+
Sbjct: 333 KYSALVITKNEKETIFSIAGKHCESGDILIKDFKGPWPNPGDYLITFTTGAYNFSMYTWY 392

Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           N    P + +         ++  +Y D   
Sbjct: 393 NATLRPAVVLVENGKEKLIVKRENYEDLLR 422


>gi|289706374|ref|ZP_06502732.1| diaminopimelate decarboxylase [Micrococcus luteus SK58]
 gi|289556869|gb|EFD50202.1| diaminopimelate decarboxylase [Micrococcus luteus SK58]
          Length = 494

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 57/425 (13%), Positives = 108/425 (25%), Gaps = 62/425 (14%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA------GVKLLLALKCFAAWGMFDTLNQYMDGTT 56
            TP  ++D+                A      G  +  A K            +      
Sbjct: 62  GTPLLVVDEDDFRARARAFREGFDAAFADLCGGADVYYAGKSMLTLSTARWAAEEGLRVD 121

Query: 57  SSSLYEVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQK 113
           ++S  E+ +             +   K       A+ +    II +++ +L      A +
Sbjct: 122 TASGGELAIALAAGVDPAHIGLHGNNKSDAELRTALEAGVGRIIVDSLDELTHLAALASE 181

Query: 114 L--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNG----------- 160
                 + LR+ P V               + G            NV G           
Sbjct: 182 AGRRAPVMLRLTPGVHAHTHDFIATAHEDQKFGLSLAPASTDRDGNVAGRSPAAVAVAAA 241

Query: 161 ----------LMFHNNCENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTD 206
                     +  H   +      F      +L+ + +       ++  + LGGG     
Sbjct: 242 LAAESIELLGVHCHIGSQIFEAEGFGLAAGRVLEFLAEVKAEHGVELAELDLGGGHGIAY 301

Query: 207 KDYPVKDFCQRLKEFSEK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI 255
                      + +                  +I LEPG AI         TV       
Sbjct: 302 TAVDEPRPAAEIADALADDVQKTVERLGLTCPRISLEPGRAISGPAGLTLYTVGVTKTVD 361

Query: 256 ----------KNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT----AMVCGRSCLAGD 301
                     +  V VD  +  +    L   +   +            + V G+ C +GD
Sbjct: 362 VDAPDGGTAARRYVAVDGGMSDNPRPVLYDADYTAVSARRTSEAEPLLSRVVGKHCESGD 421

Query: 302 IFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           I     +    +  GD ++      Y     + +N +  P +   +       IR  +  
Sbjct: 422 ILVRDVYLPADLGRGDLLAVPATGAYTHVMSSNYNALARPAVVAVSGGQARVIIRRETQE 481

Query: 361 DYYNN 365
           D +  
Sbjct: 482 DLFAR 486


>gi|332706085|ref|ZP_08426157.1| diaminopimelate decarboxylase [Lyngbya majuscula 3L]
 gi|332355177|gb|EGJ34645.1| diaminopimelate decarboxylase [Lyngbya majuscula 3L]
          Length = 473

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 54/394 (13%), Positives = 115/394 (29%), Gaps = 33/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P Y++D+               N       +L A K +    +    N    G    S
Sbjct: 66  GSPLYIVDEVTFRTACHQYREAFANYYPGESLVLYASKAWNCLAICAIANSESLGIDVVS 125

Query: 60  LYEVMLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             E+          +   ++       E++     C TI+ +   +L        + + +
Sbjct: 126 GGELYTALQAGVSADKLYFHGNNKSTSELELATEICCTIVVDNWLELKALASL-PQENIR 184

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCEN- 169
           I +R+ P +              S+ G       +           N  GL  H   +  
Sbjct: 185 IMIRLTPGIECHTHDYIRTGHLDSKFGFDPDTWDQVFTFISQHPTLNFVGLHAHIGSQIF 244

Query: 170 --KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-KDYPVKDFCQRLKEFSEKYS 226
             +     + +L     +   +   ++ I++GGG+     +          +K   +   
Sbjct: 245 ERQPHQDLAKVLVECIVKAADYDLPVQEINVGGGLGICYLESDDPPSIDDWVKGVCDSVV 304

Query: 227 VQI----------YLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDYLL 274
                          EPG +IV        T+    +   I+  + VD  +  +      
Sbjct: 305 AACTSRQLVLPKLLSEPGRSIVGPACVTAYTLGSSKVIPEIRTYLTVDGGMSDNPRPITY 364

Query: 275 YQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                ++  N           + G+ C +GDI  +       + GD +       YN + 
Sbjct: 365 QSVYRSVVANRMSAPLTEKITIAGKHCESGDILIKDATLPQTQPGDILVVMATGAYNYSM 424

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            + +N +  P   +         ++  +Y D   
Sbjct: 425 ASNYNRLPRPAAVLVKDGEAQVIVQRETYQDLIR 458


>gi|262039855|ref|ZP_06013128.1| diaminopimelate decarboxylase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259042760|gb|EEW43758.1| diaminopimelate decarboxylase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 420

 Score =  191 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 51/398 (12%), Positives = 118/398 (29%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAQLSQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        E   +     D      +      +   ++  L++  + +     ++
Sbjct: 82  RALAAGYDPQQNPEDIVFTADLIDDATLDRVKALQIPVNAGSIDMLSQLGEVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G          + +      + G+  H       +
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYSHLPAALEVMRRYQLQLVGIHMHIGSGVD-Y 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----------KDYPVKDFCQRLKEFS 222
                +   + ++   F   ++ IS GGG+                Y + +  +      
Sbjct: 199 GHLEQVCGAMVRQVVDFGQDLQAISAGGGLSIPYREGEEAIDTAHYYGLWNRAREQIAAH 258

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATI 281
             +SV++ +EPG  +V  +  L + V  +     ++ V++D+     +   +        
Sbjct: 259 LGHSVKLEIEPGRFLVAESGVLVSQVRSVKEMGSRHFVLIDAGFNDLMRPAMYGSYHHIT 318

Query: 282 --------YPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                            +V G  C +GD+F        E      V  GD +   D   Y
Sbjct: 319 ALAADGRDLSAAPQVETVVAGPLCESGDVFTQQEGGKVETRLLPAVAPGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    + +        R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFDGGKARLIRRRQTIQELLA 416


>gi|300723903|ref|YP_003713214.1| diaminopimelate decarboxylase, PLP-binding [Xenorhabdus nematophila
           ATCC 19061]
 gi|297630431|emb|CBJ91096.1| diaminopimelate decarboxylase, PLP-binding [Xenorhabdus nematophila
           ATCC 19061]
          Length = 431

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 59/408 (14%), Positives = 124/408 (30%), Gaps = 55/408 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +L D   ++  +             +  A K  +   +   + +      S SL E
Sbjct: 27  GTPLWLYDGDNIIKQIKKLKQFDV-----IRFAQKACSNTHILRLMREQGVKVDSVSLGE 81

Query: 63  VMLGH-EKFGGET----HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
           V       F          +     D    + +   D  +   ++  L++   +  +   
Sbjct: 82  VERALYAGFQPGRDKSEIVFTADVIDEATLSRVIELDIPVNVGSIDMLDQIGTR--QSGH 139

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170
            + LR+NP   +      +     S+ G   +D       I      + GL  H      
Sbjct: 140 PVWLRLNPGFGHGHSQKTNTGGENSKHGIWYQDLPLAIEKIHQYGLKLAGLHMHIGSGVD 199

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----------KDYPVKDFCQRLKE 220
            +   +++   + ++       I+ IS GGG+                Y +    ++  E
Sbjct: 200 -YQHLASVCNAMVEQVILCGEDIQAISAGGGLSIPYNTGEEAVDTEHYYSLWHEARQRIE 258

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA 279
               ++V++ +EPG  +V  +  L   V  +     +N V+VD+     +   +      
Sbjct: 259 QHLGHAVELEIEPGRFLVAESGILMAEVRAVKSMGSRNYVLVDAGFSDLMRPAMYGSYHH 318

Query: 280 TIYPNTGP-----------------YTAMVCGRSCLAGDIFGEF-------HFEKPVKIG 315
                                       +V G  C +GD+F +             V++G
Sbjct: 319 ISVLPVEQSENGTSMQEAGSQETLLQETLVAGPLCESGDVFTQLEGGEVVPRMLPSVRVG 378

Query: 316 DRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
           D + F D   Y  +  + +N   +    +          R  +  +  
Sbjct: 379 DYLIFHDTGAYGASMSSNYNSRPLIPEVLFIEGEVHLIRRRQTIEELL 426


>gi|260771626|ref|ZP_05880546.1| diaminopimelate decarboxylase [Vibrio metschnikovii CIP 69.14]
 gi|260613403|gb|EEX38602.1| diaminopimelate decarboxylase [Vibrio metschnikovii CIP 69.14]
          Length = 358

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 55/345 (15%), Positives = 99/345 (28%), Gaps = 24/345 (6%)

Query: 36  LKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKD--CEIDAVLSN 92
           +K  +  G+ +TL +   G    S  E+              ++   K       A+   
Sbjct: 1   MKANSNLGVLNTLARLGSGFDIVSGGELERVLAAGGNPSKVVFSGVGKTAAEMKRALTLQ 60

Query: 93  CDTIIFNTVSQLNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK 150
                  +  +L      A +L     + LRINP V              ++ G   +  
Sbjct: 61  IKCFNVESEPELLLLNQVAGELGVTAPVSLRINPDVDAHTHPYISTGLRDNKFGIAFERA 120

Query: 151 IESE-------IKNVNGLMFHNNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGG 200
            E           NV G+  H   +  +   F      +     +       I  + +GG
Sbjct: 121 PEVYRLANSLEHINVRGIDCHIGSQLTALEPFIDATDRLLALIDQLHAEGIAIAHLDVGG 180

Query: 201 GIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE----PGEAIVTNTTTLNTTVLDISENIK 256
           G+    +D          K    +     +LE    PG AI  N   L T V  +     
Sbjct: 181 GLGVVYRDERPPQPGDYAKALLARLHNHPHLELIFEPGRAIAANAGVLLTRVEFLKHTEH 240

Query: 257 NLV-IVDSSVEAHVPDYLLYQES---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPV 312
               I+D+++   +   L                  T  + G  C  GD  G+      +
Sbjct: 241 KNFAIIDAAMNDLMRPALYQAWQDIVPVAPRAGEAVTYDLVGPVCETGDFLGKDRALV-L 299

Query: 313 KIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF 357
           + GD ++      Y     + +N        + + D      +  
Sbjct: 300 EQGDLLAVRSAGAYGFVMSSNYNTRTRAAEVMVDGDKIHLVRQRE 344


>gi|303254099|ref|ZP_07340214.1| diaminopimelate decarboxylase [Streptococcus pneumoniae BS455]
 gi|303260351|ref|ZP_07346321.1| diaminopimelate decarboxylase [Streptococcus pneumoniae SP-BS293]
 gi|303262499|ref|ZP_07348441.1| diaminopimelate decarboxylase [Streptococcus pneumoniae SP14-BS292]
 gi|303265130|ref|ZP_07351043.1| diaminopimelate decarboxylase [Streptococcus pneumoniae BS397]
 gi|303266008|ref|ZP_07351903.1| diaminopimelate decarboxylase [Streptococcus pneumoniae BS457]
 gi|303268060|ref|ZP_07353861.1| diaminopimelate decarboxylase [Streptococcus pneumoniae BS458]
 gi|302598932|gb|EFL65963.1| diaminopimelate decarboxylase [Streptococcus pneumoniae BS455]
 gi|302636399|gb|EFL66892.1| diaminopimelate decarboxylase [Streptococcus pneumoniae SP14-BS292]
 gi|302638517|gb|EFL68982.1| diaminopimelate decarboxylase [Streptococcus pneumoniae SP-BS293]
 gi|302642420|gb|EFL72766.1| diaminopimelate decarboxylase [Streptococcus pneumoniae BS458]
 gi|302644449|gb|EFL74701.1| diaminopimelate decarboxylase [Streptococcus pneumoniae BS457]
 gi|302645347|gb|EFL75581.1| diaminopimelate decarboxylase [Streptococcus pneumoniae BS397]
          Length = 416

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 61/392 (15%), Positives = 113/392 (28%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   SS  
Sbjct: 19  PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78

Query: 62  EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++    +  G E    +    D E         TI  +    +   +  A        
Sbjct: 79  ELLMSHKLDFLGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERAAGIPEIISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169
                 V      + D     ++ G       E+         +   ++  L  +     
Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                   + +   +        +++I+L GGI          +    + E   K   + 
Sbjct: 198 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYHPDQEPNDIALIGEGVRKVYEEV 257

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     I+ E G  ++     L T V    E  +  + VD+S    +   +     
Sbjct: 258 LTSAGLGQVKIFTELGRFMLAPHGALVTRVTHKKETYRTYLGVDASAVNLMRPAMYGAYH 317

Query: 279 A--TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
               +    GP     V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HISNVTHPDGPAEVVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                   +   +G  + IR      DY+  L
Sbjct: 378 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 409


>gi|222152576|ref|YP_002561751.1| pyridoxal-dependent decarboxylase [Streptococcus uberis 0140J]
 gi|222113387|emb|CAR41034.1| pyridoxal-dependent decarboxylase [Streptococcus uberis 0140J]
          Length = 412

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 58/388 (14%), Positives = 118/388 (30%), Gaps = 27/388 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D+  +             N G K   A+K      +   L +   G   ++  
Sbjct: 19  PTPFHLYDEAGIRQKAREVNKAFSWNKGFKEYFAVKATPTPAILKILQEENCGVDCATEV 78

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E+M+ HE    +    +      E         TI  +   Q+   ++ +    K     
Sbjct: 79  ELMMSHELGFKDIMFSSNNTPAREYQYAQEVGATINLDAYEQIAYLEETSGLPEKISLRY 138

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN----KS 171
               V      + D  +  S+ G   +        ++++     G+              
Sbjct: 139 NPGGVFALGTDIMDHPQ-DSKFGMTKEQLFQGYKELKAKGVKEFGIHSFLASNTVTNDYY 197

Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY------ 225
                 + +   +        + +I+L GGI         ++   ++    +K       
Sbjct: 198 PQLARQLFQLAVQIKEELDISLSFINLSGGIGVNYLPDQKENDIAQIGLGVKKAFEEILV 257

Query: 226 -----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280
                 + IY E G  ++     L T VL   +  K+ + VD+S    +   +       
Sbjct: 258 PNNLGHISIYTELGRFMLAPHGHLITRVLHRKKTYKDYIGVDASAVNLLRPAMYGSYHHI 317

Query: 281 IYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
              +          V G  C   D F +       + GD +   D   +  +    +NG 
Sbjct: 318 TNISNPDGEVELVDVVGSLCENNDKFAKDRELPQARPGDLLVIHDTGAHGFSMGYQYNGR 377

Query: 338 NMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
                 +    G ++ IR   +  DY++
Sbjct: 378 LRSAEMLLEESGQVRMIRRAETPEDYFS 405


>gi|253579002|ref|ZP_04856273.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251849945|gb|EES77904.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 426

 Score =  190 bits (483), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 64/391 (16%), Positives = 121/391 (30%), Gaps = 29/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +  N          N G K   A+K      +   L +Y  G   SS+ 
Sbjct: 20  PTPFHLYDEKGIRENAKAVKEAFAWNKGFKEFFAVKATPNPFLIQILQEYGCGCDCSSMT 79

Query: 62  EVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+M+        G+    +    + E          I  + ++ +   +     + K I 
Sbjct: 80  ELMMSKAIGCKEGDIMFSSNDTPEEEFKYANEIGGIINLDDITHIESVERAVGYIPKVIS 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCEN---- 169
            R NP   +        N   ++ G   +   E+            G+            
Sbjct: 140 CRYNPGGVFKISNDIMDNPGDAKYGMTTEQIFEAFKILKEKGAEEFGIHAFLASNTVTNE 199

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
              +    M +   K        +++I+L GG+    K     +  + + E   K   + 
Sbjct: 200 YYPMLAKEMFEMAVKLQKETGAHVKFINLSGGVGIAYKPDQTPNDIREIGEGVRKVYEEV 259

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     IY E G  ++     L T  +      K  + VD+     +   +     
Sbjct: 260 LVPAGMGDVAIYTEMGRFMMGPYGCLVTKAIHEKHTHKEYIGVDACAVNLMRPAMYGAYH 319

Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F    +   V +GD +   D   +       +
Sbjct: 320 HITVMGKEDQPCDHMYDVTGSLCENNDKFAIDRYLPKVDMGDLLVIHDTGAHGFAMGYNY 379

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG    +  + + DG+ + IR   +  DY+ 
Sbjct: 380 NGKLKSSEILLHEDGSFEMIRRAETPKDYFA 410


>gi|221124278|ref|XP_002160229.1| PREDICTED: similar to Ornithine decarboxylase [Hydra
           magnipapillata]
          Length = 361

 Score =  190 bits (483), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 52/357 (14%), Positives = 105/357 (29%), Gaps = 29/357 (8%)

Query: 36  LKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFG--GETHAYNVAY-KDCEIDAVLSN 92
           +K  ++  +     +   G    S  E+          G+     V   +     A+   
Sbjct: 1   MKANSSLAILQLFAKAGCGFDIVSEGELARVLAAGADAGKVIFSGVGKTRAEMARALEVG 60

Query: 93  CDTIIFNTVSQLNKFKDKA--QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD- 149
                  + ++++   + A        I +R+NP+V              ++ G   +  
Sbjct: 61  IGCFNVESEAEIDVLNEVALGMGKQAPISIRVNPNVDPKTHPYISTGLKGNKFGIAHERT 120

Query: 150 ------KIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGG 200
                         V G+  H   +      +   +  +             I  I  GG
Sbjct: 121 LLTYQRAAALPGLKVVGIDCHIGSQITEETPYLDAMDRMLDLVESIEAAGIGIHHIDFGG 180

Query: 201 GIHFTDKDYPVKDFCQRLKEFSEKY------SVQIYLEPGEAIVTNTTTLNTTVLDISEN 254
           G+                 +   K         Q+ +EPG ++V N     T VL +   
Sbjct: 181 GLGINYNGDTPPAADALWHKLLAKLDARGFGQRQLMIEPGRSLVGNAGVCVTEVLYMKPG 240

Query: 255 IKNLVIVDSSVEAHVPDYLLYQESATIYPNT-------GPYTAMVCGRSCLAGDIFGEFH 307
            +    +  +    +P   +YQ   TI P         G     V G  C +GD  G   
Sbjct: 241 EQKNFCIVDAAMNDLPRPAMYQAFHTIVPVKQAASQSSGAEVFDVVGPVCESGDWIGHDR 300

Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             + V+ GD+++      Y ++  + +N        + +   +    +  S+ D   
Sbjct: 301 TLQ-VQSGDKLAVLSAGAYCMSMSSNYNSRPKAAEVLVDGAHSHLIRQRDSFADQIR 356


>gi|118467936|ref|YP_889210.1| diaminopimelate decarboxylase [Mycobacterium smegmatis str. MC2
           155]
 gi|13124107|sp|Q9X5M1|DCDA_MYCS2 RecName: Full=Diaminopimelate decarboxylase; Short=DAP
           decarboxylase
 gi|4894689|gb|AAD32591.1|AF126720_2 meso-diaminopimelate decarboxylase [Mycobacterium smegmatis str.
           MC2 155]
 gi|118169223|gb|ABK70119.1| diaminopimelate decarboxylase [Mycobacterium smegmatis str. MC2
           155]
          Length = 474

 Score =  190 bits (483), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 49/406 (12%), Positives = 115/406 (28%), Gaps = 45/406 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ID+                 G  +  A K F    +   +++       ++  E
Sbjct: 64  GTPLFVIDEDDFRTRCRDIAAAFGG-GQYVHYAAKAFLCSEIARWVDEEGLSLDVATGGE 122

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F       +   K       AV +    ++ ++  ++ +    A      + 
Sbjct: 123 LAVALHAGFPASRITVHGNNKSVAELTAAVQAGVGHVVLDSEIEIERLDQIAGAAGVVQD 182

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G            +    ++   + GL  H   +
Sbjct: 183 VLVRVTVGVEAHTHEFISTAHEDQKFGLSLATGAAMNAIRRVFATDNLRLVGLHSHIGSQ 242

Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F          +      F  +    +  + LGGG+  +   +      + L +
Sbjct: 243 IFDVAGFEIAAHRVIGLLRDVVAEFGVEKTSQMSIVDLGGGLGISYLPHDDPPPMKELAD 302

Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS----- 264
              +            + ++ +EPG AI    T     V  + +   +            
Sbjct: 303 KLLEIVRTESAAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVAVSQTAHRRYVSVDG 362

Query: 265 -VEAHVPD----YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318
            +  ++              +   +  P  A + G+ C +GDI     +    +  GD I
Sbjct: 363 GMSDNIRTSLYAAQYDARLVSRVSDAPPALARIVGKHCESGDIVVRDTWVSDDIAPGDLI 422

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
                  Y  +  + +N +  P +           +R  +  D  +
Sbjct: 423 GVAATGAYCYSMSSRYNLLCRPAVVAVADGQARLVLRRETVEDLLS 468


>gi|145295320|ref|YP_001138141.1| hypothetical protein cgR_1260 [Corynebacterium glutamicum R]
 gi|140845240|dbj|BAF54239.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 445

 Score =  190 bits (483), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 51/402 (12%), Positives = 111/402 (27%), Gaps = 41/402 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +++D+    +            G  +  A K F    +   +++       +S+ E
Sbjct: 42  GTPLFVVDEDDFRSRCRDMATAFGGPG-NVHYASKAFLTKTIARWVDEEGLALDIASINE 100

Query: 63  VMLGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           + +     F       +   K  D     V +    ++ ++  +L      A  +   + 
Sbjct: 101 LGIALAAGFPASRITAHGNNKGVDFLRALVQNGVGHVVLDSAQELELLDYVAAGEGKIQD 160

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168
           + +R+ P +          +    + G                 +E  N+ GL  H   +
Sbjct: 161 VLIRVKPGIEAHTHEFIATSHEDQKFGFSLASGSAFEAAKAANNAENLNLVGLHCHVGSQ 220

Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS-- 222
                 F    +       +        +  + LGGG                +      
Sbjct: 221 VFDAEGFKLAAERVLGLYSQIHSELGVALPELDLGGGYGIAYTAVEEPLNVAEVASDLLT 280

Query: 223 ---------EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS------VEA 267
                       +  + +EPG AI   +T     V    +   +             +  
Sbjct: 281 AVGKMAAELGIDAPTVLVEPGRAIAGPSTVTIYEVGTTKDVHVDDDKTRRYIAVDGGMSD 340

Query: 268 HVPDYLL---YQESATIYPNTG-PYTAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFED 322
           ++   L    Y          G P    + G  C +GDI      +   +  GD ++   
Sbjct: 341 NIRPALYGSEYDARVVSRFAEGEPVNTRIVGSHCESGDILINDEIYPSDITSGDFLALAA 400

Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              Y     + +N    P +       +   +R  + +D  +
Sbjct: 401 TGAYCYAMSSRYNAFTRPAVVSVRAGSSRLMLRRETLDDILS 442


>gi|154502727|ref|ZP_02039787.1| hypothetical protein RUMGNA_00541 [Ruminococcus gnavus ATCC 29149]
 gi|153796610|gb|EDN79030.1| hypothetical protein RUMGNA_00541 [Ruminococcus gnavus ATCC 29149]
          Length = 424

 Score =  190 bits (483), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 63/391 (16%), Positives = 121/391 (30%), Gaps = 29/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +  N+         N G K   A+K      + D L +Y  G   SS  
Sbjct: 20  PTPFHLYDEKGIRENVKALREAFSWNEGYKEYFAVKACPNPFLIDILREYDCGCDCSSYT 79

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+ML       G+   ++       +          I  +  + ++  +     + + I 
Sbjct: 80  ELMLSDAIGVKGQDIMFSSNDTPAEDYVLAEKLGAIINLDDFTHIDFLEKTIGYIPETIS 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN---- 169
            R NP   +        N   ++ G   +        ++S+     G+            
Sbjct: 140 CRYNPGGLFKISNDIMDNPGDAKYGMTTEQLFEAFKILKSKGAKEFGIHAFLASNTVTND 199

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
              +    + +   K        I++I+L GGI          +  + + E   +   + 
Sbjct: 200 YYPMLAKVLFEQAVKLQKETGVHIKFINLSGGIGIPYTPDQEPNDIRVIGEGVRRVYEEV 259

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     IY E G  ++     L TT +      K  + VD+     +   +     
Sbjct: 260 LVPAGMGDVAIYTELGRFMMGPYGCLVTTAIHEKHTHKEYIGVDACAVDLMRPAMYGAYH 319

Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        ++ GD +   D   +       +
Sbjct: 320 HITVMGKEDAPHDHKYDVTGSLCENNDKFAIDRMLPEIEKGDYLVIHDTGAHGFAMGYSY 379

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   DG+++ IR      DY+ 
Sbjct: 380 NGKLKHAELLLKEDGSVQMIRRAERPADYFA 410


>gi|306834154|ref|ZP_07467274.1| diaminopimelate decarboxylase [Streptococcus bovis ATCC 700338]
 gi|304423727|gb|EFM26873.1| diaminopimelate decarboxylase [Streptococcus bovis ATCC 700338]
          Length = 414

 Score =  190 bits (483), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 59/388 (15%), Positives = 118/388 (30%), Gaps = 27/388 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D+  +             N G K   A+K      +   L +   G   ++  
Sbjct: 19  PTPFHLYDEMGIREKARALNKAFAWNKGFKEYFAVKATPTPAILKILQEEDCGVDCATEV 78

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E+++ H+    +    +      E         TI  +    +   K+ A      + LR
Sbjct: 79  ELLMSHKLGFTDIMFSSNDTPAREFRYAKEIGATINLDAYEHIAFLKEAAGLPET-VSLR 137

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVN--GLMFHNNCEN----KS 171
            NP   ++       N   S+ G      I+     + + V   G+              
Sbjct: 138 YNPGGVFALGTDIMDNPEESKFGMTKAQLIQGFKDLKAEGVKNFGIHSFLASNTVTNDYY 197

Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ--- 228
                 + +   +        + +I+L GG+    +     +    + +   +   +   
Sbjct: 198 PELARQLFELAVEVKEKTGVAVSFINLSGGVGVNYRPEQEPNDIAVIGKGVHRVFDEVLI 257

Query: 229 --------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280
                   I+ E G  ++     L T V    +  +  + VD+S    +   +       
Sbjct: 258 PAGLGDVKIFTELGRFMLAPHGLLVTKVRHRKQTYRTYIGVDASAVNLMRPAMYDAYHHI 317

Query: 281 IY---PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                PN       V G  C   D F +       ++GD +   D   +  +    +NG 
Sbjct: 318 TNVSNPNGKLEVVDVVGSLCENNDKFAKQRELPEARVGDTLVVHDTGAHGFSMGYQYNGR 377

Query: 338 NMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
                 +   DG  + IR   +  DY+ 
Sbjct: 378 LRSAEILYQEDGGARLIRRAETPEDYFA 405


>gi|325269420|ref|ZP_08136037.1| diaminopimelate decarboxylase [Prevotella multiformis DSM 16608]
 gi|324988341|gb|EGC20307.1| diaminopimelate decarboxylase [Prevotella multiformis DSM 16608]
          Length = 385

 Score =  190 bits (482), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 66/372 (17%), Positives = 123/372 (33%), Gaps = 26/372 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALY-IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           I+TP+Y  D   L   L       R +A   +  A+K  A   +   +++   G    S 
Sbjct: 13  IETPFYYYDCNLLRETLQAIHEEARTHADFIVHYAVKANANAKVLKMISRAGMGADCVSG 72

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHK- 116
            E+    +  F   +  Y    K      +  + D   FN  +V++L+     A +  K 
Sbjct: 73  GEIQRCLDSGFPAGSIVYAGVGKADWEINLALDHDIFCFNVESVAELDVINSLAARKGKV 132

Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE 168
             I  RINP V      +       ++ G          ++          GL FH   +
Sbjct: 133 ANICFRINPDVGAHTHKMITTGLAENKFGIAMQDMVPAIREAERMANIRFIGLHFHIGSQ 192

Query: 169 NKSFLCFSAML---KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS--- 222
                 +  +      I+        ++  I++GGG+    +             F    
Sbjct: 193 ILDMTDYRHLCSRINEIQDGLEEQGIEVRHINVGGGLGIDYERPDSHPIPDFKAYFYVFA 252

Query: 223 ----EKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQE 277
                +   +++ E G A+V    +L T  L + +   K   IVD+ +   +   L +  
Sbjct: 253 HYLKLREGQKLHFELGRAVVGQMGSLITRTLYVKQGTAKQFAIVDAGMTDLIRPALYHAR 312

Query: 278 SA--TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                +  +       V G  C + D+F +      V  GD I+      Y     + +N
Sbjct: 313 HEIENLSSDGPEQIYDVVGPICESSDVFAKDIPLNTVHRGDLIALRSAGAYGEIMASQYN 372

Query: 336 GINMPTIAVKNV 347
              +P   + + 
Sbjct: 373 CRRLPVGYLSDE 384


>gi|307132455|ref|YP_003884471.1| diaminopimelate decarboxylase, PLP-binding protein [Dickeya
           dadantii 3937]
 gi|306529984|gb|ADM99914.1| diaminopimelate decarboxylase, PLP-binding protein [Dickeya
           dadantii 3937]
          Length = 420

 Score =  190 bits (482), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 55/398 (13%), Positives = 120/398 (30%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +  D + ++  +             +  A K  +   +   + Q      S SL E+ 
Sbjct: 27  PLWAYDAETIIERIGQLRQFD-----TIRFAQKACSNLHILKLMRQQGVKVDSVSLGEIE 81

Query: 65  LGHE-KFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
                 F       E         D  +  V      +   ++  L++  +++      +
Sbjct: 82  RALAAGFEPGTEAHEIVFTADVLDDATLQRVQELNIPVNAGSIDMLHQLGERS--PGHPV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172
            LRINP   +      +     S+ G    D  ++          + G+  H       +
Sbjct: 140 WLRINPGFGHGHSQKTNTGGENSKHGIWYADLPQALEALSRYRLKLVGIHMHIGSGVD-Y 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----------KDYPVKDFCQRLKEFS 222
                +   + ++       +E IS GGG+                Y + +  +      
Sbjct: 199 GHLEQVCDAMVQQVLAVGQDLEAISAGGGLSIPYRHGGERIDTQHYYGLWNRAREQIAAH 258

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATI 281
            ++ V + +EPG  +V  +  L   V  +     ++ V+VD+     +   +        
Sbjct: 259 LEHPVALEIEPGRFLVAESGVLVAQVRAVKDMGSRHFVLVDAGFSDLMRPAMYGSYHHIT 318

Query: 282 Y--------PNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                      +     +V G  C +GD+F        E       ++GD + F D   Y
Sbjct: 319 LLPGDGRDLSQSALRDTVVAGPLCESGDVFTQQAGGGVETLPLPSAQVGDYLVFHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    +          R  + ++   
Sbjct: 379 GASMSSNYNSRPLIAEVLFEQGQPRLIRRRQTLDELLA 416


>gi|319901715|ref|YP_004161443.1| diaminopimelate decarboxylase [Bacteroides helcogenes P 36-108]
 gi|319416746|gb|ADV43857.1| diaminopimelate decarboxylase [Bacteroides helcogenes P 36-108]
          Length = 386

 Score =  190 bits (482), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 68/365 (18%), Positives = 123/365 (33%), Gaps = 26/365 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTAL-YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           ++TP+Y  D Q L + L      + K     +  A+K  A   +   + +   G    S 
Sbjct: 13  LRTPFYYYDTQVLRDTLSGIRTEVSKYDNYSVHYAVKANANPKVLAIIRENGLGADCVSG 72

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F      +    K      +    N       +V +L    + A  +   
Sbjct: 73  GEIRAAVKAGFPAGRIVFAGVGKADWEINIGLDYNIFCFNVESVPELEVINELAAVKGKV 132

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-----SEIKNVN--GLMFHNNCE 168
             +  RINP+V              ++ G   +D         E+KNV   GL FH   +
Sbjct: 133 ANVAFRINPNVGAHTHANITTGLAENKFGISMQDMDYVIDVAQEMKNVKFIGLHFHIGSQ 192

Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-- 223
                 F+     +  ++ +       IE I++GGG+         +      K F+   
Sbjct: 193 ILDMGDFVALCNRINELQDKLEARRICIEHINVGGGLGIDYAHPNRQAIPDFKKYFTTYD 252

Query: 224 -----KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQE 277
                +    ++ E G ++V    +L + VL + +       + D+ +   +   L    
Sbjct: 253 EHLKLRSYQTLHFELGRSVVGQCGSLISRVLYVKQGTNKQFAILDAGMTDLIRPALYQAF 312

Query: 278 S--ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                I  +    T  V G  C + D+FG+      VK GD I+      Y     + +N
Sbjct: 313 HKIENITSDAPMQTYDVVGPICESSDVFGKAIDLNTVKRGDFIALRSAGAYGEIMASSYN 372

Query: 336 GINMP 340
              +P
Sbjct: 373 CRELP 377


>gi|154482513|ref|ZP_02024961.1| hypothetical protein EUBVEN_00180 [Eubacterium ventriosum ATCC
           27560]
 gi|149736643|gb|EDM52529.1| hypothetical protein EUBVEN_00180 [Eubacterium ventriosum ATCC
           27560]
          Length = 418

 Score =  190 bits (482), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 60/391 (15%), Positives = 123/391 (31%), Gaps = 30/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+++ D++  + N          N G +   A+K      +   L +   G   SS  
Sbjct: 20  PTPFHIYDEKGFMENARKVNEAFSWNKGFREYFAVKAEPNPFIIKKLKEAGCGVDCSSYT 79

Query: 62  EVMLGHE-KFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+M+  +  F  +   ++       E          I  + ++ ++ + +    + + + 
Sbjct: 80  ELMIADKLGFRNDEIMFSSNETPAGEFKYCNDLGGIINLDDITMID-YMEAECGIPETVS 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES----EIKNVNGLMFH------NNCEN 169
            R NP   +        N   ++ G   +  +E+    + K V     H           
Sbjct: 139 CRYNPGGVFEVCNGIMDNPGDAKYGMTPEQIVEAFKILKAKGVKNFGIHAFLASNTVTNE 198

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
              +    + +   K        I++I+L GG+    +     +    + E   K   +I
Sbjct: 199 YYPMLARTIFELAVKLEKETGADIKFINLSGGVGIPYRPDQEPNDIMAIGEGVRKVYEEI 258

Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                      Y E G  ++     L T  +      K  + VD+     +   +     
Sbjct: 259 LKPEGMDDIAIYTEMGRFMMGPYGALVTKAVHEKHIYKEYIGVDACAVNLMRPAMYGAYH 318

Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        + +GD I   D   +  +    +
Sbjct: 319 HITVMGKEDQPKDHVYDVVGSLCENNDKFAVDRELPKIDMGDFIYIHDTGAHGFSMGYNY 378

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   DG+++ IR   +  DY+ 
Sbjct: 379 NGRLRSAELLLKEDGSVEMIRRAETPADYFA 409


>gi|19552404|ref|NP_600406.1| diaminopimelate decarboxylase [Corynebacterium glutamicum ATCC
           13032]
 gi|62390068|ref|YP_225470.1| diaminopimelate decarboxylase [Corynebacterium glutamicum ATCC
           13032]
 gi|118302|sp|P09890|DCDA_CORGL RecName: Full=Diaminopimelate decarboxylase; Short=DAP
           decarboxylase
 gi|40514|emb|CAA30445.1| unnamed protein product [Corynebacterium glutamicum]
 gi|21323947|dbj|BAB98573.1| Diaminopimelate decarboxylase [Corynebacterium glutamicum ATCC
           13032]
 gi|41325404|emb|CAF19884.1| DIAMINOPIMELATE DECARBOXYLASE [Corynebacterium glutamicum ATCC
           13032]
          Length = 445

 Score =  190 bits (482), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 50/402 (12%), Positives = 112/402 (27%), Gaps = 41/402 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +++D+    +            G  +  A K F    +   +++       +S+ E
Sbjct: 42  GTPLFVVDEDDFRSRCRDMATAFGGPG-NVHYASKAFLTKTIARWVDEEGLALDIASINE 100

Query: 63  VMLGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           + +     F       +   K  +     V +    ++ ++  +L      A  +   + 
Sbjct: 101 LGIALAAGFPASRITAHGNNKGVEFLRALVQNGVGHVVLDSAQELELLDYVAAGEGKIQD 160

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168
           + +R+ P +          +    + G                 +E  N+ GL  H   +
Sbjct: 161 VLIRVKPGIEAHTHEFIATSHEDQKFGFSLASGSAFEAAKAANNAENLNLVGLHCHVGSQ 220

Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS-- 222
                 F    +       +        +  + LGGG                +      
Sbjct: 221 VFDAEGFKLAAERVLGLYSQIHSELGVALPELDLGGGYGIAYTAAEEPLNVAEVASDLLT 280

Query: 223 ---------EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS------VEA 267
                       +  + +EPG AI   +T     V    +   +             +  
Sbjct: 281 AVGKMAAELGIDAPTVLVEPGRAIAGPSTVTIYEVGTTKDVHVDDDKTRRYIAVDGGMSD 340

Query: 268 HVPDYLL---YQESATIYPNTG-PYTAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFED 322
           ++   L    Y          G P +  + G  C +GDI      +   +  GD ++   
Sbjct: 341 NIRPALYGSEYDARVVSRFAEGDPVSTRIVGSHCESGDILINDEIYPSDITSGDFLALAA 400

Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              Y     + +N    P +       +   +R  + +D  +
Sbjct: 401 TGAYCYAMSSRYNAFTRPAVVSVRAGSSRLMLRRETLDDILS 442


>gi|258645622|ref|ZP_05733091.1| diaminopimelate decarboxylase [Dialister invisus DSM 15470]
 gi|260402982|gb|EEW96529.1| diaminopimelate decarboxylase [Dialister invisus DSM 15470]
          Length = 424

 Score =  189 bits (481), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 63/393 (16%), Positives = 129/393 (32%), Gaps = 28/393 (7%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           +  TP++L D++ + +N+         ++      A+K      +  +L +   G   SS
Sbjct: 19  VYGTPFHLYDEKGISDNVKRLQKAFSWSSDFHEYFAVKATPNPWIMKSLKKLGVGADCSS 78

Query: 60  LYEVMLG-HEKFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
           + E++L       GE   ++     D E          I  + +S L+  +     + K+
Sbjct: 79  MAELILAETVGITGEEIVFSSNDTPDEEFLKAHELGAIINLDDISNLDDMERL-HLVPKR 137

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI----ESEIKNVNGLMFHNNCENKSFL 173
           I  R NP    ++          ++ G   +  +     ++ K +  +  H    +    
Sbjct: 138 ICFRYNPGPDLARGNAIIGTPQEAKYGMTREQLLKCVAWAKNKGIGYIGIHTMVISAELE 197

Query: 174 ------CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL--------- 218
                   S M     +        + +I  GGGI    +        + L         
Sbjct: 198 LPGLLGTISMMFDLANEIRNTHGVTVSFIDFGGGIGIPYRPEQEPVDLEGLGEGAKKLFE 257

Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
           ++     + +I  E G  I      L T  +      ++ + VD+ +   +   +     
Sbjct: 258 EKMRGFENTRICFECGRMITGPYGYLVTKAIHYKNIYRDYIGVDACMADLMRPGIYGAYH 317

Query: 279 ATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                  G         V G  C   D F        +++GD I   D   +  +    +
Sbjct: 318 HVSVLGKGNLPKNKIYDVVGSLCENSDKFAIQRELPEIEMGDLIIIHDTGAHGHSMGYNY 377

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       + + DGT++ IR   + +D +  L
Sbjct: 378 NGRLRHQEIMVHEDGTVQQIRRNETLHDLFATL 410


>gi|315931022|gb|EFV09997.1| carboxynorspermidine decarboxylase [Campylobacter jejuni subsp.
           jejuni 327]
          Length = 336

 Score =  189 bits (481), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 120/334 (35%), Positives = 187/334 (55%), Gaps = 18/334 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TP Y++++ KL  N +    + + +G K+LLALK FA  G    + +Y+ G T S L+
Sbjct: 6   IQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSGLW 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E     E    E H Y+ A+K+ EI  + S    I+FN+++Q +KF+ K       +GLR
Sbjct: 66  EAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQSK--TQKNSLGLR 123

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
            N   S +   L +P   +SRLG + KD    ++  + GL FH  CE +S     A+LK 
Sbjct: 124 CNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLNAIEGLHFHALCE-ESADALEAVLKV 182

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            +++FG +I Q++W++ GGG H T K Y V+      K FS+KY VQ+YLEPGEA+   T
Sbjct: 183 FKEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKYGVQVYLEPGEAVGWQT 242

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP---------------NTG 286
             L  +V+DI EN K + I+D+S EAH+PD ++   ++ +                    
Sbjct: 243 GNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKISDLKEN 302

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
            +  ++ G +CLAGD+ GE+ F+K +KIGD++ F
Sbjct: 303 EFAYLLTGNTCLAGDVMGEYAFDKKLKIGDKMFF 336


>gi|300933604|ref|ZP_07148860.1| hypothetical protein CresD4_05997 [Corynebacterium resistens DSM
           45100]
          Length = 473

 Score =  189 bits (481), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 55/412 (13%), Positives = 117/412 (28%), Gaps = 51/412 (12%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++I++                 G ++  A K F    +   + +       +S  E
Sbjct: 57  GTPAFVINEDDFRARCRALANAFGG-GERVHYASKAFLTKTIARWVAEEGLALDIASHGE 115

Query: 63  VMLGHEK-FGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI- 118
           + +     F  +    +   K  D    AV S  + I+ ++  ++ +  +   +L +   
Sbjct: 116 LQVALAADFPADRITIHGNNKSLDFLQFAVESGVELIVIDSEQEIARLSEVCGQLGQTQD 175

Query: 119 -GLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168
             +R+ P V          +    + G                 +    + GL  H   +
Sbjct: 176 VLIRVTPGVHVDTHEFIATSHEDQKFGFSLSSGTAYRAAVAAATARGLRLRGLHCHVGSQ 235

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQI--------------EWISLGGGIHFTDKDYPVKDF 214
                 F+   + +   +   +  +                + LGGG             
Sbjct: 236 VFEASGFALAAERLLGLWAKLLNDLPDLEGFDDTSLANFNVLDLGGGYGIAYMPDQEALD 295

Query: 215 CQRLKEFSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDIS------ENIKN 257
              +    ++               + +EPG AI   +T     V  +          + 
Sbjct: 296 VDEVASDLKEKVAKAAKTAGVPKPVLNVEPGRAIAGPSTVTLYRVGTVKDVDVSEHATRR 355

Query: 258 LVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-V 312
            + VD  +  ++   L   E     A            + G  C +GDI          V
Sbjct: 356 YLSVDGGMSDNIRPALYEAEYDCRVANREVQGEMIPTRIVGSHCESGDILVNDALVPDDV 415

Query: 313 KIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           + GD +       Y  +  + +N +  P + V +       +R  +  D   
Sbjct: 416 QAGDLVMLGATGAYCFSMASRYNMMTRPPVIVVSEGQHRVMVRRETIEDVLA 467


>gi|209526840|ref|ZP_03275360.1| diaminopimelate decarboxylase [Arthrospira maxima CS-328]
 gi|209492711|gb|EDZ93046.1| diaminopimelate decarboxylase [Arthrospira maxima CS-328]
          Length = 463

 Score =  189 bits (481), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 51/399 (12%), Positives = 111/399 (27%), Gaps = 37/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P Y++D+  L                    +L A K +    +   +     GT   S
Sbjct: 53  GSPLYILDEVTLRTACRQYREAWAKYYPGESLILYASKAWNCLAICAIVASEGLGTDVVS 112

Query: 60  LYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKK 117
             E+          +    +   K      +  +    ++ +    L    + A ++  +
Sbjct: 113 GGELYTAKTAGVSPDKIYLHGNNKSRSELELAISTGCTVVADNWLDLTNLVELADEMSVQ 172

Query: 118 IGLRIN----PSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNN 166
             +R+     P +              S+ G       E              G+  H  
Sbjct: 173 SPVRVMIRFTPGIECHTHEYIRTGHLDSKFGFDPNQLDEVFKFVSSNPSLCCEGIHAHIG 232

Query: 167 CENKSFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL----- 218
            +            +L +   +   +   I  +++GGG+     +       +       
Sbjct: 233 SQIFELQPHQDLAGVLMDAVTKGSQYGLNITEVNVGGGLGIRYTEDDDPPSIESWVSAIA 292

Query: 219 ------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVP 270
                  E  +    ++  EPG +I+        T+    E       +     +  +  
Sbjct: 293 SSVVAACEQRQIPLPKLLCEPGRSIIGPAAITAYTIGSRKEIPDLRTYIAVDGGMSDNPR 352

Query: 271 DYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAG 325
                     +  N        T  V G+ C +GDI  +        + GD +       
Sbjct: 353 PITYQSVYRVVIANRMSAPLTETITVAGKHCESGDILIQQAHLPGDCQTGDILVVMATGA 412

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           YN +  + +N +  P   + N   +   I+  +Y+D   
Sbjct: 413 YNYSMASNYNRLPRPAAVLVNDSLSSIIIQRETYSDLIR 451


>gi|322377602|ref|ZP_08052092.1| protein TabA [Streptococcus sp. M334]
 gi|321281367|gb|EFX58377.1| protein TabA [Streptococcus sp. M334]
          Length = 416

 Score =  189 bits (481), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 61/392 (15%), Positives = 116/392 (29%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   SS  
Sbjct: 19  PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78

Query: 62  EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++ H+  F G    ++     D E         TI  +    +   +  A        
Sbjct: 79  ELLMSHKLDFPGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERAAGIPETISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169
                 V      + D     ++ G       E+         +   ++  L  +     
Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                   + +   +        +++I+L GGI    +     +    + E   K   + 
Sbjct: 198 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEPNDIALIGEGVRKVYEEV 257

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     I+ E G  ++     L T V    +  +  + VD+S    +   +     
Sbjct: 258 LTPADLGQVKIFTELGRFMLAPHGALVTRVTHKKKTYRTYLGVDASAVNLMRPAMYGAYH 317

Query: 279 A--TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
               +    GP     V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HITNVTHPDGPSEVVDVVGSLCENNDKFAVNRELTHTEIGDLLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                   +   +G  + IR      DY+  L
Sbjct: 378 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 409


>gi|300790779|ref|YP_003771070.1| diaminopimelate decarboxylase [Amycolatopsis mediterranei U32]
 gi|299800293|gb|ADJ50668.1| diaminopimelate decarboxylase [Amycolatopsis mediterranei U32]
          Length = 447

 Score =  189 bits (481), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 58/398 (14%), Positives = 119/398 (29%), Gaps = 38/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP YLID+Q++ +             V++  A K      +   + +      + S  E
Sbjct: 50  GTPSYLIDEQQVRDTAREYREAL--PDVEVAYASKALCTRAVLRWVAEEGLSLDTCSAGE 107

Query: 63  VMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + +     F  E    +      +    A+      I+ +++ ++ +    A    + + 
Sbjct: 108 IAVARSVGFPAERMLLHGNAKTPEDLKAALGYGVRRIVVDSLDEIEQLGALAHGAQQVM- 166

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKD------------KIESEIKNVNGLMFHNNC 167
           +R+ P V+              + G    D                    + GL  H   
Sbjct: 167 IRVTPGVAAGAHAAISTGTEGQKFGFSLLDGVPDNVDAAVEAVKRQPGLRLRGLHCHIGS 226

Query: 168 ENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLK 219
           +      + A  + + +            +  + LGGG           + +  + +RL+
Sbjct: 227 QVSRVDRYEAAARRMAEVLVRIRDTHGVTLRELDLGGGHAVPYVGGEPAFDLGGYSRRLR 286

Query: 220 EFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY 272
                          ++ +EPG AIV         V  +    +  V VD  +  +    
Sbjct: 287 VALAYECAAHRFPLPRLTIEPGRAIVGPAGITVYRVCAVKRGSRTFVAVDGGMSDNARPS 346

Query: 273 LLYQESATI----YPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYN 327
           L      T               V GR C AGD+  +       +  GD ++      Y+
Sbjct: 347 LYGARYTTRLVGRRSTAKRLPMTVVGRHCEAGDVLADGISLPADLHAGDLLAVPCTGAYH 406

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            +  + +N +  P +           +R  +  D    
Sbjct: 407 HSLASNYNQVGRPPLIGVRGGVATLLVRRETEEDLGRR 444


>gi|238792795|ref|ZP_04636426.1| Diaminopimelate decarboxylase [Yersinia intermedia ATCC 29909]
 gi|238727903|gb|EEQ19426.1| Diaminopimelate decarboxylase [Yersinia intermedia ATCC 29909]
          Length = 420

 Score =  189 bits (481), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 56/398 (14%), Positives = 117/398 (29%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +  D + +   ++            +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWAYDGEIIAQRINQLRNFDV-----IRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LG-HEKF----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
              H  F          +     D      ++  +  +   ++  L++    A      +
Sbjct: 82  RAIHAGFQPGQEPAEIVFTADLLDQATLLRVTELNIPVNAGSIDMLDQLGQHA--PGHPV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172
            LRINP   +      +     S+ G   +D  ++          + G+  H       +
Sbjct: 140 WLRINPGFGHGHSQKTNTGGENSKHGIWHQDLPQAIEKVKKYGLTLVGVHMHIGSGVD-Y 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-------- 224
                +   + ++       I  IS GGG+    +    +   +       K        
Sbjct: 199 QHLEQVCDAMVQQVIALGQDISAISAGGGLSIPYQFGDDEIDTEHYYGLWNKAREQIAAH 258

Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATI 281
             + V + +EPG  +V  +  L   V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVSLEIEPGRFLVAESGVLVAQVRAVKDMGRRHYVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 282 YPNTGPYT--------AMVCGRSCLAGDIFG-------EFHFEKPVKIGDRISFEDVAGY 326
                            +V G  C +GD+F        E       KIGD + F D   Y
Sbjct: 319 LLPADGRDLTSAPLIDTVVGGPLCESGDVFTQEAGGGLETRALPAAKIGDYLVFHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    +          R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFEQGQPRLIRRRQTIEELIA 416


>gi|306824471|ref|ZP_07457817.1| diaminopimelate decarboxylase [Streptococcus sp. oral taxon 071
           str. 73H25AP]
 gi|304433258|gb|EFM36228.1| diaminopimelate decarboxylase [Streptococcus sp. oral taxon 071
           str. 73H25AP]
          Length = 420

 Score =  189 bits (481), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 58/392 (14%), Positives = 113/392 (28%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   SS  
Sbjct: 21  PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILKEEGCGVDCSSYV 80

Query: 62  EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++ ++  F G    ++     D E         TI  +    +   +  A        
Sbjct: 81  ELLMSYKLDFPGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERAAGIPEIISC 140

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169
                 V      + D     ++ G       E+         +   ++  L  +     
Sbjct: 141 RYNPGGVFELGTDIMDNPG-EAKFGMTKNQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 199

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                   + +   +        +++I+L GGI    +     +    + E   K   + 
Sbjct: 200 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEPNDIAMIGEGVRKVYEEV 259

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     I+ E G  ++     L T V    +  +  + VD+S    +   +     
Sbjct: 260 LTPADLGQVKIFTELGRFMLAPHGALVTRVTHKKKTYRAYLGVDASAVNLMRPAMYGAYH 319

Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                           V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 320 HITNLTHPDGPIEVVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 379

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                   +   +G  + IR      DY+  L
Sbjct: 380 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 411


>gi|269957250|ref|YP_003327039.1| diaminopimelate decarboxylase [Xylanimonas cellulosilytica DSM
           15894]
 gi|269305931|gb|ACZ31481.1| diaminopimelate decarboxylase [Xylanimonas cellulosilytica DSM
           15894]
          Length = 463

 Score =  189 bits (481), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 61/418 (14%), Positives = 127/418 (30%), Gaps = 56/418 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA------GVKLLLALKCFAAWGMFDTLNQYMDGTT 56
            TP Y++D+ +              A      GV +  A K      +     +      
Sbjct: 42  GTPAYVLDEGEFRLRARRFADAFGQAFEQVGTGVDVYYAGKALLTKAVARWAREEGLRVD 101

Query: 57  SSSLYEVMLGHEKF--GGETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDKAQK 113
           ++S  E+ +       G E   +     D E++A   +    II +++ ++++  D AQ 
Sbjct: 102 TASGGELAVALAAGVPGAELGLHGNNKSDGELEAALDAGVGRIIVDSLGEIDRLADLAQA 161

Query: 114 --LHKKIGLRINPSVSYSKFILADPNRPFSRLG---------------EKCKDKIESEIK 156
             +   + LR+   V               + G                     +E    
Sbjct: 162 RGVVAPVMLRVTTGVHAGGHEFIATAHEDQKFGLSVSAGPGGGDSPAVIALLRVLERPSL 221

Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPV- 211
            + G+  H   +      F+   + + +   H   +    ++ + LGGG           
Sbjct: 222 RLLGIHSHIGSQILDADGFAEAARTVLRLRAHLGIRTGVLVDEVDLGGGYGIAYLPQDSE 281

Query: 212 -------KDFCQRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKN---- 257
                   +  + + +   +      +I +EPG AIV        TV  +   +      
Sbjct: 282 LDPFRVAHEIARAVADACRELGTPLPRISIEPGRAIVGPAGITVYTVGTVKPVVVTSDDG 341

Query: 258 ------LVIVDSSVEAHVPDYLLYQESA----TIYPNTGPYTAMVCGRSCLAGDIFGEFH 307
                  V VD  +  ++   L              +       V G+ C +GDI  +  
Sbjct: 342 GTFTRLYVSVDGGMSDNIRPALYGAAYHAEIANRRSDAPLALVRVVGKHCESGDIVVDEL 401

Query: 308 FEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
                V+ GD ++      Y  +  + +N +  P +       +   +R  + +D   
Sbjct: 402 LLPGDVRPGDLLAVAATGAYGRSMASNYNLLTRPPVIGVLDGASRVLVRRETVDDLLA 459


>gi|331004659|ref|ZP_08328121.1| hypothetical protein HMPREF0491_02983 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330409586|gb|EGG89026.1| hypothetical protein HMPREF0491_02983 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 423

 Score =  189 bits (481), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 63/391 (16%), Positives = 117/391 (29%), Gaps = 29/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+++ D++ +  N          N G K   A+K      + + LN+   G   SS+ 
Sbjct: 20  PTPWHIYDEKGIRENAKKLREAFSWNKGFKEYFAVKATPNPFIMNILNECGCGMDCSSMT 79

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+ L     F G+   ++      E           I  + ++ +   +     L + + 
Sbjct: 80  ELELADACGFMGKDIMFSSNETPIEEFKFANDLGAIINLDDITHIEYVEKVCGGLPETMS 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES----EIKNVNGLMFH------NNCEN 169
            R NP   ++       N   ++ G      IE+    + K V     H           
Sbjct: 140 ARYNPGGVFTMSNGIMDNPGDAKYGMTPDQIIEAFNIMKSKGVKNFGIHAFLASNTVTNE 199

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK----- 224
                   + +   +        + +I+L GG+          +    + +  +K     
Sbjct: 200 YYPKLARELFEFAVRIKNECGICVSFINLSGGVGIPYTPDEEPNDIFEIGKGVKKAYDEV 259

Query: 225 ------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                   V I+ E G  ++     L T  +      K  + VD+     +   +     
Sbjct: 260 LTANDINDVSIFSELGRYMLGPYGALVTKAVHEKHTYKEYIGVDACATNLMRPAMYGAYH 319

Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                            V G  C   D F        +  GD I   D   +       +
Sbjct: 320 HLSVLGKEDEKDDYVYDVVGALCENNDKFAIDRKLPKIDKGDYIYIHDTGAHGFAMGYNY 379

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   DG +K IR   +  DY+ 
Sbjct: 380 NGKLKSAELLLQEDGNVKLIRRAETSKDYFA 410


>gi|261415933|ref|YP_003249616.1| diaminopimelate decarboxylase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261372389|gb|ACX75134.1| diaminopimelate decarboxylase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302326360|gb|ADL25561.1| diaminopimelate decarboxylase [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 419

 Score =  189 bits (481), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 57/404 (14%), Positives = 118/404 (29%), Gaps = 49/404 (12%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D+  +   +     +       +  A K      +   + +      + S  E
Sbjct: 18  GTPLWIYDRATIERAVKDVQ-VFD----TVRFAQKACPNLSVVSLIRKLGCVVDAVSAGE 72

Query: 63  VMLGH-EKFGG-------ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK- 113
           ++      F G           Y     D +   ++   D      V   +  +  A   
Sbjct: 73  IVRALKAGFKGGQQKGKVPEIVYTADIFDRDALELVKKYDI--AVNVGSPDMIQQLADFG 130

Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNC 167
           +  ++ +R+NP   +      +     S+ G   +         +S    + GL  H   
Sbjct: 131 VKSELTIRVNPGFGHGHSRKTNTGGDLSKHGIWHEQIKDCIKLAQSNGMWITGLHMHIGS 190

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------------DYPVKDFC 215
               F   + +   +     H  + +  IS GGG+                  Y + D  
Sbjct: 191 GTD-FEHLAQVCDAMVDASRHLGSHLRTISAGGGLPIPYHEEEKGNRIDVKAYYDLWDNA 249

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL 274
           ++  + S  + V + +EPG  +V  +  L   +  + +   NL  + D+     V     
Sbjct: 250 RKRIQQSIGHDVHLEVEPGRYLVAESGYLVAEIRAVKKQGSNLFYLLDAGFTDLVRPSFY 309

Query: 275 YQESATI------YPNTGPYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFE 321
               A                A+V G  C +GD+F +              ++GD +   
Sbjct: 310 GSYHAISVVARDGRELNETVDAVVAGPLCESGDVFTQEEGGFVVTRKLPKAQVGDLLILH 369

Query: 322 DVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           D   Y     + +N        +             ++     N
Sbjct: 370 DAGAYGAAMSSNYNSRRYAAETMYTKGEIKLVRERQTFEQLLQN 413


>gi|206575861|ref|YP_002236734.1| diaminopimelate decarboxylase [Klebsiella pneumoniae 342]
 gi|288933701|ref|YP_003437760.1| diaminopimelate decarboxylase [Klebsiella variicola At-22]
 gi|290511219|ref|ZP_06550588.1| diaminopimelate decarboxylase [Klebsiella sp. 1_1_55]
 gi|206564919|gb|ACI06695.1| diaminopimelate decarboxylase [Klebsiella pneumoniae 342]
 gi|288888430|gb|ADC56748.1| diaminopimelate decarboxylase [Klebsiella variicola At-22]
 gi|289776212|gb|EFD84211.1| diaminopimelate decarboxylase [Klebsiella sp. 1_1_55]
          Length = 420

 Score =  189 bits (481), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 50/398 (12%), Positives = 117/398 (29%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAQLSQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        E   +     D      +      +   ++  L++  + +     ++
Sbjct: 82  RALAAGYDPQQNPEDIVFTADLIDDATLDRVKALQIPVNAGSIDMLSQLGEVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G          + +      + G+  H       +
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYSHLPAALEVMRRYQLQLVGIHMHIGSGVD-Y 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----------KDYPVKDFCQRLKEFS 222
                +   + ++   F   ++ IS GGG+                Y + +  +      
Sbjct: 199 GHLEQVCGAMVRQVVDFGQDLQAISAGGGLSIPYREGEEAIDTAHYYGLWNRAREQIAAH 258

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATI 281
             + V++ +EPG  +V  +  L + V  +     ++ V++D+     +   +        
Sbjct: 259 LGHPVKLEIEPGRFLVAESGVLVSQVRSVKEMGSRHFVLIDAGFNDLMRPAMYGSYHHIT 318

Query: 282 --------YPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                            +V G  C +GD+F        E      V  GD +   D   Y
Sbjct: 319 ALAADGRDLSAAPQVETVVAGPLCESGDVFTQQEGGKVETRLLPAVVPGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    + +        R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFDGGKARLIRRRQTIQELLA 416


>gi|184200609|ref|YP_001854816.1| diaminopimelate decarboxylase [Kocuria rhizophila DC2201]
 gi|183580839|dbj|BAG29310.1| diaminopimelate decarboxylase [Kocuria rhizophila DC2201]
          Length = 483

 Score =  189 bits (481), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 59/417 (14%), Positives = 118/417 (28%), Gaps = 54/417 (12%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA------GVKLLLALKCFAAWGMFDTLNQYMDGTT 56
            +P Y++ ++   +           A       V +  A K      +         G  
Sbjct: 57  GSPAYVVSERTFRSRARRVREAFDAALEPLGVQVAVYYASKALLCTSVARWAVAEGLGID 116

Query: 57  SSSLYEVMLGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
           ++S  E+ +       GE  A +   K  +    A+ +    I+ +++ ++      A++
Sbjct: 117 TASGGELAVALAAGVPGERIALHGNNKSAEELSAALDAGVGRIVVDSLPEVELLATLARQ 176

Query: 114 L--HKKIGLRINPSVSYSKFILADPNRPFSRLGEK----------------CKDKIESEI 155
                 + LR+ P V  S            + G                       + + 
Sbjct: 177 RGTRAPVMLRVTPGVHASTHEFIATAHEDQKFGLSLHAAADGEDSPALQAVAACLAQDDA 236

Query: 156 KNVNGLMFHNNCENKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
             + GL  H   +  +   F+   +      E   G +   +  I LGGG          
Sbjct: 237 LELRGLHCHIGSQIFAAEGFAQAAERVLALRETVAGRWGLALPEIDLGGGHGVAYTAADS 296

Query: 212 KDFCQRLKEFSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI 260
                 +                  +  +  EPG  I   +     TV  +     +  +
Sbjct: 297 AREITDIAGDLASLLAKALETSQLPAPHLSFEPGRYIAGPSGCTVYTVGTVKTVTVSPGV 356

Query: 261 VDSS------VEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK 310
                     +  +    L   +     A       P  + V G+ C +GD+  +  +  
Sbjct: 357 QRRYVSVDGGMSDNARPVLYDADYTAVLANRVSPEAPVLSRVVGKHCESGDVVVKDVYLP 416

Query: 311 -PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGT-IKAIREFSYNDYYNN 365
             V  GD +       Y  +  + +N +  P I     DG   + +R  S  D    
Sbjct: 417 GDVHRGDLLVVPVTGAYCWSLSSNYNWLPRPGIVAVGEDGVPREIVRRESMADLLAR 473


>gi|15827559|ref|NP_301822.1| diaminopimelate decarboxylase [Mycobacterium leprae TN]
 gi|221230036|ref|YP_002503452.1| diaminopimelate decarboxylase [Mycobacterium leprae Br4923]
 gi|13626268|sp|Q50140|DCDA_MYCLE RecName: Full=Diaminopimelate decarboxylase; Short=DAP
           decarboxylase
 gi|13093109|emb|CAC31509.1| diaminopimelate decarboxylase [Mycobacterium leprae]
 gi|219933143|emb|CAR71223.1| diaminopimelate decarboxylase [Mycobacterium leprae Br4923]
          Length = 472

 Score =  189 bits (480), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 55/406 (13%), Positives = 119/406 (29%), Gaps = 45/406 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ID+                 G  +  A K F    +   +++        S  E
Sbjct: 64  GTPLFVIDEDDFRFRCREIAAAFGG-GENVHYAAKAFLCTEIARWIDEEGLSLDVCSGGE 122

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F  E  + +   K       AV +    I+ ++ +++ +    A +    + 
Sbjct: 123 LAVALHASFPPERISLHGNNKSVAELKDAVKAGVGYIVLDSTTEIERLDAIAGEAGIVQD 182

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G            +    ++   + GL  H   +
Sbjct: 183 VLVRLTVGVEAHTHEFIATAHEDQKFGLSVASGAAMAAVRRVFATDNLRLVGLHSHIGSQ 242

Query: 169 NKSFLCFSAMLKNIEKEFGHFI--------TQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F      +       +         Q+  + LGGG+  +            L  
Sbjct: 243 IFDVAGFELAAHRVIGLLCDIVGEFDPEKTAQLSIVDLGGGLGISYLPDDDPPPIFELAA 302

Query: 221 FSEKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDS 263
                             ++ +EPG AI    T     V  I +        +  V +D 
Sbjct: 303 KLGAIVSNESAAVGLPVPKLMVEPGRAIAGPGTITLYEVGTIKDVDVSATAHRRYVSIDG 362

Query: 264 SVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318
            +  ++   L   +      +   +     A + G+ C +GDI     +    +K GD +
Sbjct: 363 GMSDNIRTALYDAQYDVRLVSRTSDAPAAPASIVGKHCESGDIVVRDTWVPDDLKPGDLV 422

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
                  Y  +  + +N +  P +           +R  + +D  +
Sbjct: 423 GVAATGAYCYSLSSRYNMLGRPAVVAVCAGQARLILRRETVDDLLS 468


>gi|7436508|pir||T09993 diaminopimelate decarboxylase (EC 4.1.1.20) - Mycobacterium leprae
 gi|699341|gb|AAA63102.1| lysA [Mycobacterium leprae]
          Length = 495

 Score =  189 bits (480), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 55/406 (13%), Positives = 119/406 (29%), Gaps = 45/406 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ID+                 G  +  A K F    +   +++        S  E
Sbjct: 87  GTPLFVIDEDDFRFRCREIAAAFGG-GENVHYAAKAFLCTEIARWIDEEGLSLDVCSGGE 145

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F  E  + +   K       AV +    I+ ++ +++ +    A +    + 
Sbjct: 146 LAVALHASFPPERISLHGNNKSVAELKDAVKAGVGYIVLDSTTEIERLDAIAGEAGIVQD 205

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G            +    ++   + GL  H   +
Sbjct: 206 VLVRLTVGVEAHTHEFIATAHEDQKFGLSVASGAAMAAVRRVFATDNLRLVGLHSHIGSQ 265

Query: 169 NKSFLCFSAMLKNIEKEFGHFI--------TQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F      +       +         Q+  + LGGG+  +            L  
Sbjct: 266 IFDVAGFELAAHRVIGLLCDIVGEFDPEKTAQLSIVDLGGGLGISYLPDDDPPPIFELAA 325

Query: 221 FSEKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDS 263
                             ++ +EPG AI    T     V  I +        +  V +D 
Sbjct: 326 KLGAIVSNESAAVGLPVPKLMVEPGRAIAGPGTITLYEVGTIKDVDVSATAHRRYVSIDG 385

Query: 264 SVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318
            +  ++   L   +      +   +     A + G+ C +GDI     +    +K GD +
Sbjct: 386 GMSDNIRTALYDAQYDVRLVSRTSDAPAAPASIVGKHCESGDIVVRDTWVPDDLKPGDLV 445

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
                  Y  +  + +N +  P +           +R  + +D  +
Sbjct: 446 GVAATGAYCYSLSSRYNMLGRPAVVAVCAGQARLILRRETVDDLLS 491


>gi|308177031|ref|YP_003916437.1| diaminopimelate decarboxylase [Arthrobacter arilaitensis Re117]
 gi|307744494|emb|CBT75466.1| diaminopimelate decarboxylase [Arthrobacter arilaitensis Re117]
          Length = 473

 Score =  189 bits (480), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 63/418 (15%), Positives = 125/418 (29%), Gaps = 55/418 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA------GVKLLLALKCFAAWGMFDTLNQYMDGTT 56
            TP +++D+                A      GV +  A K F    +   +        
Sbjct: 52  GTPLFVLDENDFRARAAGFKTAFDEAFKDLCGGVDVYYAGKAFLCTEVARWVTAEGLRLD 111

Query: 57  SSSLYEVMLG-HEKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQK 113
           + S  E+ +    K      + +   K       A+      ++ +++ +L +    A  
Sbjct: 112 TCSGGELAVASAAKVPAANLSLHGNNKSAAEITRAIEMGVGRLVIDSLDELERVISIADA 171

Query: 114 LHK--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD--------------KIESEIKN 157
           + +  ++ LRI P V  S            + G    +               + ++  N
Sbjct: 172 MGQTAQVMLRITPGVHASTHEAIATAHEDQKFGLSILEDGTGSSPALRAVAGALAAKNIN 231

Query: 158 VNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK- 212
           + GL  H   +      F+     ML  + K       Q+  + LGGG            
Sbjct: 232 LLGLHAHIGSQIFEAEGFAMVARTMLGLLHKIREIHGVQLPELDLGGGYGIAYTSEDQPS 291

Query: 213 -------DFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISE--------- 253
                     Q + E  ++      +I +EPG AI   +T          +         
Sbjct: 292 TPAKLAGQMAQVVSETCKELELECPRISIEPGRAIAGPSTFTLYEAGVRKDVQVEDASGT 351

Query: 254 -NIKNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHF 308
            + +  + VD  +  +    L   +     A+         + V G+ C +GDI  +  +
Sbjct: 352 LHPRRYISVDGGMSDNPRPVLYDAQYTAVLASRMTQNDAIISRVVGKHCESGDIVVKDVY 411

Query: 309 EKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
               V  GD ++      Y     + +N +  P +           +R  +  D    
Sbjct: 412 LPEDVAAGDLLAVPATGAYCWALSSNYNYLTRPAVVAVRDGQARLIVRRETETDLLAR 469


>gi|327540951|gb|EGF27507.1| diaminopimelate decarboxylase [Rhodopirellula baltica WH47]
          Length = 427

 Score =  189 bits (480), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 56/389 (14%), Positives = 112/389 (28%), Gaps = 31/389 (7%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           TP+ L  +  +             N G +   A+K      +   + +   G   SS+ E
Sbjct: 22  TPFVLYHEDGIRARARELTDAFAWNEGFQQYFAVKATPNPHIVAMMAEEGGGADCSSVAE 81

Query: 63  VMLG-HEKFGGETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           ++        G+   +       E  +        I  +T   +++    +         
Sbjct: 82  LITCERLGITGQDVMFTSNNTTMEEFEIANKLGAIINLDTPHHVDQISQLSPLPEMVS-- 139

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSFL- 173
                    +  +   +   ++ G   +  I+   +         GL         +   
Sbjct: 140 FRFNPGPERQGNVIIGDPKEAKFGSTREQLIDGYRRCAELGISRFGLHAMVVSNELNIEA 199

Query: 174 ---CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV--- 227
                  + +   +        +E I+LGGGI    +            +   K      
Sbjct: 200 LLQTAEMLFELAAEIHRETGISVECINLGGGIGVPYQPGQEPVDLPAFGDGVRKLYESIL 259

Query: 228 --------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA 279
                   +I +E G A+      L T V++   + K+ V VD+ +   +   +      
Sbjct: 260 VPAGIAPVRILMENGRAMTGPFGYLITKVINQKSSYKDYVGVDACMSNLMRPGMYGAYHH 319

Query: 280 TIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                        T  + G  C   D F         ++GD     D   +  +    +N
Sbjct: 320 ITVMGKEDQPADRTVDIVGSLCENNDKFAIDRKMPATEVGDIAVIHDAGAHGHSMGFQYN 379

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYY 363
           G       V N  G  +AIR   ++ DY+
Sbjct: 380 GRLRSAEIVFNDAGEFRAIRRAETFEDYF 408


>gi|238783697|ref|ZP_04627717.1| Diaminopimelate decarboxylase [Yersinia bercovieri ATCC 43970]
 gi|238715410|gb|EEQ07402.1| Diaminopimelate decarboxylase [Yersinia bercovieri ATCC 43970]
          Length = 420

 Score =  189 bits (480), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 52/398 (13%), Positives = 115/398 (28%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +  D   +   ++   +        +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWAYDGDIITQRINQLRHFDV-----IRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGH-EKF----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                 F          +     D      ++     +   ++  L++   +A      +
Sbjct: 82  RALIAGFQPGQEPAEIVFTADLLDQATLLRVTELAIPVNAGSIDMLDQLGQQA--PGHPV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G   +D  ++          + G+  H       +
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYQDLPQAIEKIAQYGLTLVGIHMHIGSGVD-Y 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-------- 224
                +   + ++       I  IS GGG+    +    +   +                
Sbjct: 199 QHLEQVCDAMVEQVVTLGQDISAISAGGGLSIPYQFGDDEIDTEHYYGLWNSARERIAAH 258

Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATI 281
             + V + +EPG  +V  +  L   V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVSLEIEPGRFLVAESGVLIAQVRAVKEMGSRHYVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 282 YPN--------TGPYTAMVCGRSCLAGDIFG-------EFHFEKPVKIGDRISFEDVAGY 326
                            +V G  C +GD+F        E       +IGD + F D   Y
Sbjct: 319 LLPADGRSLSAEPLIETVVGGPLCESGDVFTQEAGGGLETRPLPAARIGDYLVFHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    +          R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFEQGQPRLIRRRQTIEELIA 416


>gi|239917326|ref|YP_002956884.1| diaminopimelate decarboxylase [Micrococcus luteus NCTC 2665]
 gi|239838533|gb|ACS30330.1| diaminopimelate decarboxylase [Micrococcus luteus NCTC 2665]
          Length = 490

 Score =  189 bits (480), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 59/425 (13%), Positives = 112/425 (26%), Gaps = 62/425 (14%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA------GVKLLLALKCFAAWGMFDTLNQYMDGTT 56
            TP  ++D+                A      G  +  A K            +      
Sbjct: 58  GTPLLVVDEDDFRARARAFREGFDAAFADLCGGADVYYAGKSMLTLSTARWAAEEGLRVD 117

Query: 57  SSSLYEVMLGHEK--FGGETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQK 113
           ++S  E+ +      +      +     D E+  A+ +    II +++ +L      A +
Sbjct: 118 TASGGELAIALAAGVYPAHIGLHGNNKSDAELRTALEAGVGRIIVDSLDELTHLAALAAE 177

Query: 114 LHK--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNG----------- 160
                 + LR+ P V               + G            NV G           
Sbjct: 178 AGHRAPVMLRLTPGVHAHTHDFIATAHEDQKFGLSLAPASTDRDGNVAGRSPAAVAVDTA 237

Query: 161 ----------LMFHNNCENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTD 206
                     +  H   +      F      +L+ + +       ++  + LGGG     
Sbjct: 238 LATESIDLLGVHCHIGSQIFEAEGFGLAAGRVLEFLAEVKAEHGVELAELDLGGGHGIAY 297

Query: 207 KDYPVKDFCQRLKEFSEK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI 255
                      + +                  ++ LEPG AI         TV       
Sbjct: 298 TAVDEPRPAAEIADALADDVQKTVERLGLRCPRVSLEPGRAISGPAGLTLYTVGVTKTVD 357

Query: 256 ----------KNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGD 301
                     +  V VD  +  +    L   +     A       P  + V G+ C +GD
Sbjct: 358 ADAPDGGTAARRYVAVDGGMSDNPRPVLYDADYTAVSARRTSEAEPALSRVVGKHCESGD 417

Query: 302 IFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           I     +    +  GD ++      Y     + +N +  P +   +       IR  +  
Sbjct: 418 ILVRDVYLPADLGRGDLLAVPATGAYTHVMSSNYNALARPAVVAVSGGLARVIIRRETQE 477

Query: 361 DYYNN 365
           D +  
Sbjct: 478 DLFAR 482


>gi|305682083|ref|ZP_07404887.1| diaminopimelate decarboxylase [Corynebacterium matruchotii ATCC
           14266]
 gi|305658556|gb|EFM48059.1| diaminopimelate decarboxylase [Corynebacterium matruchotii ATCC
           14266]
          Length = 452

 Score =  189 bits (480), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 62/406 (15%), Positives = 117/406 (28%), Gaps = 45/406 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP  ++D+    +               +  A K F    +   +N+       +S  E
Sbjct: 45  GTPVMVVDEIDFRSRCRDMARAFGGPEH-VHYASKAFMTSRIVQWVNEEGLSLDIASHGE 103

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKI- 118
           +++     F  E  A +   KD              +I ++  ++      A +L +   
Sbjct: 104 LLVALHAGFPAERIAAHGNNKDAAFLRDCVSKGVGFVILDSHQEIEDLNTIAAELGQTQD 163

Query: 119 -GLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNNCE 168
             +R+ P +               + G            +  +E     + GL  H   +
Sbjct: 164 VLIRVKPGIDAHTHEFISTAHEDQKFGFSLASGSALKAARRVVELPNLRLIGLHCHVGSQ 223

Query: 169 NKSFLCFSAMLKNIEKEFG------HFITQIEWISLGGGIHFTDKD-----------YPV 211
                 FS   + I K +           +   ++LGGG      +             +
Sbjct: 224 VFDAEGFSLAAERILKLYRTIIEECEVGEEFNILNLGGGYGIAYVEGEQPLDVEAVSTDL 283

Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLN------TTVLDISENIKNLVIVDSSV 265
                   E        I +EPG AI   +T           V       +  + VD  +
Sbjct: 284 LQRVNTYAERLHLTMPFIKVEPGRAIAGPSTVTVYTVGTVKDVTIDGGKTRRYISVDGGM 343

Query: 266 EAHVPDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISF 320
             ++   L   E      N           V G  C +GDI          ++ GD ++ 
Sbjct: 344 GDNIRPALYGAEYDIRLVNRSTDAPLIPTRVVGSHCESGDILINDRNLPEDIRPGDIVAL 403

Query: 321 EDVAGYNINRKNWFNGINMPTIAVKN--VDGTIKAIREFSYNDYYN 364
                Y  +  + +N +  P I       D     +R  +  D++N
Sbjct: 404 AATGAYCYSMSSRYNMMMRPAIVSVGAADDKAHLMVRRETLEDFFN 449


>gi|218130087|ref|ZP_03458891.1| hypothetical protein BACEGG_01674 [Bacteroides eggerthii DSM 20697]
 gi|317476580|ref|ZP_07935826.1| diaminopimelate decarboxylase [Bacteroides eggerthii 1_2_48FAA]
 gi|217987591|gb|EEC53919.1| hypothetical protein BACEGG_01674 [Bacteroides eggerthii DSM 20697]
 gi|316907256|gb|EFV28964.1| diaminopimelate decarboxylase [Bacteroides eggerthii 1_2_48FAA]
          Length = 386

 Score =  189 bits (479), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 65/365 (17%), Positives = 126/365 (34%), Gaps = 26/365 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTAL-YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           ++TP+Y  D + L + L        +     +  A+K  A   +   + +   G    S 
Sbjct: 13  LRTPFYYYDTKVLRDTLTCIRTEASRYDNYSVHYAVKANANSKVLTIIRESGLGADCVSG 72

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHK- 116
            E+       F      +    K      +  + D   FN  ++ +L    + A+   K 
Sbjct: 73  GEIRAAIKAGFPANKIVFAGVGKADWEINLGLDYDIFCFNVESIPELEIINELAEAKGKI 132

Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-----SEIKNVN--GLMFHNNCE 168
             +  RINP+V              ++ G   +D         E+KNV   GL FH   +
Sbjct: 133 ANVAFRINPNVGAHTHANITTGLAENKFGISMQDMDHVIDVAQEMKNVKFIGLHFHIGSQ 192

Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY------PVKDFCQRLK 219
                 F+     +  ++        +IE I++GGG+               K + +   
Sbjct: 193 ILDMGDFVALCNRVNELQDRLEARQIRIEHINVGGGLGIDYGHPNRQAIPDFKSYFETYD 252

Query: 220 EFSE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQE 277
              + +    ++ E G ++V    +L + VL + +       + D+ +   +   L    
Sbjct: 253 NCLKLRSYQTLHFELGRSVVGQCGSLISRVLYVKQGANKQFAILDAGMTDLIRPALYQAF 312

Query: 278 S--ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                +  +    T  V G  C + D+FG+      VK GD ++      Y     + +N
Sbjct: 313 HKIENLTSDAPLQTYDVVGPICESSDVFGKAVDLNGVKRGDLMALRSAGAYGEIMASGYN 372

Query: 336 GINMP 340
              +P
Sbjct: 373 CRELP 377


>gi|330833331|ref|YP_004402156.1| putative diaminopimelate decarboxylase [Streptococcus suis ST3]
 gi|329307554|gb|AEB81970.1| putative diaminopimelate decarboxylase [Streptococcus suis ST3]
          Length = 415

 Score =  189 bits (479), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 61/388 (15%), Positives = 118/388 (30%), Gaps = 27/388 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   ++  
Sbjct: 20  PTPFHLYDEKGIREKARALNAAFAWNKGFKEYFAVKATPTPAILKILQEEGCGVDCATDV 79

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV++  +    +    +   +  E         TI  +    +   K+ A      + LR
Sbjct: 80  EVLMSEKLGFKDIMFTSNDTQAQEFVYARKVGATINLDAYEHIEFLKNVAGIPET-VCLR 138

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN----KS 171
            NP   +S       +   S+ G   +        ++       G+              
Sbjct: 139 YNPGGVFSLGTDIMDHPEESKFGMTKEQLMKGYKELKELGVKEFGIHAFLASNTVTNDYY 198

Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY------ 225
            +    + +   +        +++I L GGI    +     +    + E   K       
Sbjct: 199 PVLAHQLFELALEIREETDVTLDFIDLSGGIGVNYRPEQEPNDIAVIGEGVRKVYEEILT 258

Query: 226 -----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280
                 ++I+ E G  ++     L T VL   E  +  + VD+S    +           
Sbjct: 259 PAGMGHIKIFTELGRFMLAPHGHLITKVLHRKETYRTYIGVDASAANLMRPAFYGAYHHI 318

Query: 281 IYPNTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                         V G  C   D F         ++GD +   D   +  +    +NG 
Sbjct: 319 TNITRPDAPIEVVDVAGSPCENNDKFAVNRELPRAEVGDTLVIHDSGAHGFSMGYNYNGR 378

Query: 338 NMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
              +  +   DGT + IR   +  DY+ 
Sbjct: 379 LRSSEILLQEDGTARMIRRAETPEDYFA 406


>gi|161506442|ref|YP_001573554.1| diaminopimelate decarboxylase [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|160867789|gb|ABX24412.1| hypothetical protein SARI_04643 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 448

 Score =  189 bits (479), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 55/398 (13%), Positives = 113/398 (28%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D + +   +             +  A K  +   +   +        S SL E+ 
Sbjct: 55  PVWVYDARIIRRQITALQQFDV-----VRFAQKACSNIHILRLMRAQGVKVDSVSLGEIE 109

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D    A +S     +   +V  L +    +     ++
Sbjct: 110 RALAAGYDPQTRPDDIVFTADVIDAATLARVSELRIPVNAGSVDMLAQLGQVS--PGHRV 167

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G    D   +          + G+  H        
Sbjct: 168 WLRLNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAVMRQYRLKLVGIHMHIGSGVDYG 227

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223
                    + +        +E IS GGG+    +          Y       R +    
Sbjct: 228 HLKQVCGAMVRQVL-ECGQDLEAISAGGGLSIPYREGEESVDTRHYYGLWNAAREQIARH 286

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES--- 278
             ++V++ +EPG  +V  +  L T +  +     +  V+VD+     +   +        
Sbjct: 287 LGHAVKLEIEPGRFLVAQSGVLVTQIRSVKQMGSRRFVLVDAGFNDLMRPAMYGSYHRIS 346

Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     N      +V G  C +GD+F        E      V  GD +   D   Y
Sbjct: 347 ALAADGRSLENGPKVETVVAGPLCESGDVFTQQEGGMVETRVLPAVTPGDYLVLHDTGAY 406

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    + +        R  +  +   
Sbjct: 407 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 444


>gi|237712075|ref|ZP_04542556.1| diaminopimelate decarboxylase [Bacteroides sp. 9_1_42FAA]
 gi|229453396|gb|EEO59117.1| diaminopimelate decarboxylase [Bacteroides sp. 9_1_42FAA]
          Length = 386

 Score =  189 bits (479), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 63/366 (17%), Positives = 116/366 (31%), Gaps = 26/366 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           ++TP+Y  D   L   L        K     +  A+K  A   +   + +   G    S 
Sbjct: 13  LETPFYYYDVNVLRETLSCINKEAGKYNNFCVHYAVKANANHKVLTIIRESGLGADCVSG 72

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHKK 117
            E+       F      Y    K      +  + D   FN  +V +L    + A    K 
Sbjct: 73  GEIRAAIKAGFPTNKIVYAGVGKTDWEINLGLDYDIFCFNVESVPELEIINELASAKGKT 132

Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168
                RINP+V              ++ G   +D                 GL FH   +
Sbjct: 133 ARVAFRINPNVGAHTHANITTGLAENKFGISMEDMDKVIDMAGTLPHVKFVGLHFHIGSQ 192

Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
                 F+     +  ++++       +E I++GGG+         +      + F+  +
Sbjct: 193 ILDMGDFVALCNRVNELQEKLCARQIIVEHINVGGGLGIDYAHPNRQAIPNFTEYFATYH 252

Query: 226 SV-------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL--Y 275
                     ++ E G A+V    +L + V+ + +       + D+ +   +   L   Y
Sbjct: 253 KHLKLRPQQTLHFELGRAVVGQCGSLISKVIYVKQGANKQFAILDAGMTDLIRPALYQAY 312

Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
            +   I       T  V G  C + D+FG+         GD  +      Y     + +N
Sbjct: 313 HKIENITSEEPMETYDVVGPICESSDVFGKAIDLNKAHRGDLFALRSAGAYGEIMASAYN 372

Query: 336 GINMPT 341
              +P 
Sbjct: 373 CRALPK 378


>gi|219681789|ref|YP_002468175.1| diaminopimelate decarboxylase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|257471491|ref|ZP_05635490.1| diaminopimelate decarboxylase [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|219624632|gb|ACL30787.1| diaminopimelate decarboxylase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
          Length = 415

 Score =  189 bits (479), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 60/394 (15%), Positives = 115/394 (29%), Gaps = 42/394 (10%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+++ D   +   ++            +  A K  +   +   +        + SL E+ 
Sbjct: 27  PFWVYDADIIYKKINLLRKFDV-----IRFAQKSCSNINILRLMKNKNVKIDAVSLGEIE 81

Query: 65  LGH-EKFGG---ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
                 F     E         +  +  V      +   ++  L +    +      + L
Sbjct: 82  RALLSGFKPSTNEIIFTADILDEETLLKVEKYKIPVNAGSLDMLKQLGKIS--PGHHVWL 139

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKD----KIESEIKNVNGLMFHNNCENKSFLCFS 176
           RINP   Y      +     S+ G    +     I+     + GL  H            
Sbjct: 140 RINPRFGYGHSKKTNTGGENSKHGIWHPEQAIPIIKKYKLKLIGLHMHIGSGVNYLHLKK 199

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE----------KYS 226
                I+  F     +I  IS+GGG+    K        ++     +             
Sbjct: 200 VSQAMIKYAF-QLNQKISSISVGGGLPIPYKFNDQPIDIKKYFMLWDIARKKISKFLGEK 258

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285
           +++ +EPG  +V  +  L + V        KN V+VD      +   +            
Sbjct: 259 IELEIEPGRFLVAESGILISKVWATKKMGNKNFVLVDVGFNDLMRPTMYGSYHHISVIYG 318

Query: 286 GPYTAM--------VCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNINR 330
                         V G  C +GDIF        +      +K+GD + F D   Y    
Sbjct: 319 DDRKMNEKETIDTVVAGPLCESGDIFTQKEGGTVQTRKLPTIKVGDYLIFHDTGAYGAAM 378

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            + +N   +    +   + +I   R  +  +  N
Sbjct: 379 SSNYNTRPLIPEILLKNNDSIVIRRRQTIEEILN 412


>gi|15903834|ref|NP_359384.1| diaminopimelate decarboxylase [Streptococcus pneumoniae R6]
 gi|116516303|ref|YP_817197.1| diaminopimelate decarboxylase [Streptococcus pneumoniae D39]
 gi|15459476|gb|AAL00595.1| Diaminopimelate decarboxylase [Streptococcus pneumoniae R6]
 gi|116076879|gb|ABJ54599.1| diaminopimelate decarboxylase [Streptococcus pneumoniae D39]
          Length = 416

 Score =  189 bits (479), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 61/392 (15%), Positives = 112/392 (28%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   SS  
Sbjct: 19  PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78

Query: 62  EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++    +  G E    +    D E         TI  +    +   +  A        
Sbjct: 79  ELLMSHKLDFLGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERVAGIPEIISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN---- 169
                 V      + D     ++ G            ++ +     GL            
Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGLHSFLASNTVTHL 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                   + +   +        +++I+L GGI    +     +    + E   K   + 
Sbjct: 198 YYPELARQLFELAVEIKEKLGIWLDFINLSGGIGVNYRPDQEPNDIALIGEGVRKVYEEV 257

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     I+ E G  ++     L T V    E  +  + VD+S    +   +     
Sbjct: 258 LTSAGLGQVKIFTELGRFMLAPHGALVTRVTHKKETYRTYLGVDASAVNLMRPAMYGAYH 317

Query: 279 A--TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
               +    GP     V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HISNVTHPDGPAEAVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                   +   +G  + IR      DY+  L
Sbjct: 378 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 409


>gi|149003637|ref|ZP_01828502.1| OxaA-like protein precursor [Streptococcus pneumoniae SP14-BS69]
 gi|168492047|ref|ZP_02716190.1| diaminopimelate decarboxylase [Streptococcus pneumoniae CDC0288-04]
 gi|168494781|ref|ZP_02718924.1| diaminopimelate decarboxylase [Streptococcus pneumoniae CDC3059-06]
 gi|221232702|ref|YP_002511856.1| pyridoxal-dependent decarboxylase [Streptococcus pneumoniae ATCC
           700669]
 gi|237650995|ref|ZP_04525247.1| pyridoxal-dependent decarboxylase [Streptococcus pneumoniae CCRI
           1974]
 gi|237822553|ref|ZP_04598398.1| pyridoxal-dependent decarboxylase [Streptococcus pneumoniae CCRI
           1974M2]
 gi|307128176|ref|YP_003880207.1| diaminopimelate decarboxylase [Streptococcus pneumoniae 670-6B]
 gi|147758369|gb|EDK65369.1| OxaA-like protein precursor [Streptococcus pneumoniae SP14-BS69]
 gi|183573698|gb|EDT94226.1| diaminopimelate decarboxylase [Streptococcus pneumoniae CDC0288-04]
 gi|183575334|gb|EDT95862.1| diaminopimelate decarboxylase [Streptococcus pneumoniae CDC3059-06]
 gi|220675164|emb|CAR69748.1| pyridoxal-dependent decarboxylase [Streptococcus pneumoniae ATCC
           700669]
 gi|306485238|gb|ADM92107.1| diaminopimelate decarboxylase [Streptococcus pneumoniae 670-6B]
          Length = 416

 Score =  189 bits (479), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 61/392 (15%), Positives = 114/392 (29%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   SS  
Sbjct: 19  PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78

Query: 62  EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++    +  G E    +    D E         TI  +    +   +  A        
Sbjct: 79  ELLMSHKLDFLGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERVAGIPEIISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169
                 V      + D     ++ G       E+         +   ++  L  +     
Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                   + +   +        +++I+L GGI    +     +    + E   K   + 
Sbjct: 198 YYPELARQLFELAVEIKEKLGIWLDFINLSGGIGVNYRPDQEPNDIALIGEGVRKVYEEV 257

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     I+ E G  ++     L T V    E  +  + VD+S    +   +     
Sbjct: 258 LTSAGLGQVKIFTELGRFMLAPHGALVTRVTHKKETYRTYLGVDASAVNLMRPAMYGAYH 317

Query: 279 A--TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
               +    GP     V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HISNVTHPDGPAEAVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                   +   +G  + IR      DY+  L
Sbjct: 378 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 409


>gi|148993161|ref|ZP_01822727.1| diaminopimelate decarboxylase [Streptococcus pneumoniae SP9-BS68]
 gi|168489983|ref|ZP_02714182.1| diaminopimelate decarboxylase [Streptococcus pneumoniae SP195]
 gi|147928135|gb|EDK79153.1| diaminopimelate decarboxylase [Streptococcus pneumoniae SP9-BS68]
 gi|183571632|gb|EDT92160.1| diaminopimelate decarboxylase [Streptococcus pneumoniae SP195]
 gi|332072059|gb|EGI82546.1| pyridoxal-dependent decarboxylase, C-terminal sheet domain protein
           [Streptococcus pneumoniae GA17570]
          Length = 416

 Score =  189 bits (479), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 61/392 (15%), Positives = 112/392 (28%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   SS  
Sbjct: 19  PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78

Query: 62  EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++    +  G E    +    D E         TI  +    +   +  A        
Sbjct: 79  ELLMSHKLDFLGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERVAGIPEIISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCEN---- 169
                 V      + D     ++ G            ++ +     GL            
Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGLHSFLASNTVTHL 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                   + +   +        +++I+L GGI    +     +    + E   K   + 
Sbjct: 198 YYPELARQLFELAVEIKEKLGIWLDFINLSGGIGVNYRPDQEPNDIALIGEGVRKVYEEV 257

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     I+ E G  ++     L T V    E  +  + VD+S    +   +     
Sbjct: 258 LTPAGLGQVKIFTELGRFMLAPHGALVTRVTHKKETYRTYLGVDASAVNLMRPAMYGAYH 317

Query: 279 A--TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
               +    GP     V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HISNVTHPDGPAEAVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                   +   +G  + IR      DY+  L
Sbjct: 378 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 409


>gi|242238205|ref|YP_002986386.1| diaminopimelate decarboxylase [Dickeya dadantii Ech703]
 gi|242130262|gb|ACS84564.1| diaminopimelate decarboxylase [Dickeya dadantii Ech703]
          Length = 420

 Score =  189 bits (479), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 56/398 (14%), Positives = 116/398 (29%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +  D Q +++ ++            +  A K  +   +   + Q      S SL E+ 
Sbjct: 27  PVWAYDAQTIIDRIEQLRQFD-----TIRFAQKACSNIHILRLMRQQGVKVDSVSLGEIE 81

Query: 65  LGHEKF------GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
                         E            +  V      +   +V  L++    A      +
Sbjct: 82  RALAAGFVPGSADHEIVFTADVLDRATLQRVHELHIPVNAGSVDMLSQLG--AASPGHAV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G    D       I+     + G+  H       +
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYADLPLALAEIQRYQLKLVGIHMHIGSGVD-Y 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK---- 224
                +   +  +   F   +  IS GGG+             + +     +  E+    
Sbjct: 199 GHLEQVCDAMVNQVIAFGQDLTAISAGGGLSIPYHHDGERIDTRHYYGLWHQARERIAAH 258

Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATI 281
             ++V + +EPG  +V     L   V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHAVTLEIEPGRFLVAEAGVLVAEVRAVKDMGSRHFVLVDAGFNDLMRPAMYGSYHHIT 318

Query: 282 Y--------PNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                            +V G  C +GD+F        E       ++GD + F D   Y
Sbjct: 319 LLAGDGRDLTTAARRDTVVAGPLCESGDVFTQQAGGGVETLALPDARVGDYLVFHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    +          R  + ++   
Sbjct: 379 GASMSSNYNSRPLLPEVLFEQGKPRLIRRRQTLDELLA 416


>gi|163846166|ref|YP_001634210.1| diaminopimelate decarboxylase [Chloroflexus aurantiacus J-10-fl]
 gi|222523912|ref|YP_002568382.1| diaminopimelate decarboxylase [Chloroflexus sp. Y-400-fl]
 gi|163667455|gb|ABY33821.1| diaminopimelate decarboxylase [Chloroflexus aurantiacus J-10-fl]
 gi|222447791|gb|ACM52057.1| diaminopimelate decarboxylase [Chloroflexus sp. Y-400-fl]
          Length = 434

 Score =  189 bits (479), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 63/397 (15%), Positives = 123/397 (30%), Gaps = 36/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAGVKL-LLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP YL+D   L   +            G  +   A K      +   + Q   G    S
Sbjct: 34  GTPLYLLDDLTLRGAMRAYRQAFATAYPGPSIVHYAGKALLNTALAQIVAQEGLGLDVVS 93

Query: 60  LYEVMLG-HEKFGGET-HAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
             E+++        +  H +  A  D E   A+      I+ + + +L +       L  
Sbjct: 94  ATELLVAQRAGLPMDRVHLHGNAKSDQELERAIAWRVGAIVVDNLDELQRLCALTSHLTT 153

Query: 117 KIG--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNC 167
             G  LR+ P++              ++ G   +   E+  + +        GL  H   
Sbjct: 154 PQGVLLRVAPAIEADTHAHIATGSATAKFGLPLEALDEAVAQTLAAPSLRWLGLHAHIGS 213

Query: 168 ENKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC-------- 215
           +  +    +A ++       +    F      +S GGG+                     
Sbjct: 214 QLFALEQVTATVEVLVALAARIRDRFGVAPVELSPGGGLGVPYTADQPATDIGRYAQVVS 273

Query: 216 QRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY 272
             L    E+Y     ++ +EPG +IV         V  +    ++ V +D  +  ++   
Sbjct: 274 AALCAACERYRLPLPRLTVEPGRSIVARAGVALYRV--VGRKGEHWVHIDGGMADNIRPA 331

Query: 273 LLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
           L     + +  N        T  V GR C +GD+         V+  D ++      Y +
Sbjct: 332 LYGARYSAVLANKPASPPAMTVNVGGRYCESGDVLLRDIALPTVQPDDLLAVATAGAYTL 391

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           +  + +N +  P + +          R  +  D    
Sbjct: 392 SMSSTYNLVPRPALVLVADGQARLIQRRETEADVLAR 428


>gi|225859733|ref|YP_002741243.1| diaminopimelate decarboxylase [Streptococcus pneumoniae 70585]
 gi|225721732|gb|ACO17586.1| diaminopimelate decarboxylase [Streptococcus pneumoniae 70585]
          Length = 416

 Score =  189 bits (479), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 61/392 (15%), Positives = 114/392 (29%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   SS  
Sbjct: 19  PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78

Query: 62  EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++    +  G E    +    D E         TI  +    +   +  A        
Sbjct: 79  ELLMSHKLDFLGSEIMFSSNNTSDKEYAYARELGATINLDAFEDIEHLERVAGIPEIISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169
                 V      + D     ++ G       E+         +   ++  L  +     
Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                   + +   +        +++I+L GGI    +     +    + E   K   + 
Sbjct: 198 YYPELARQLFELAVEIKEKLGIWLDFINLSGGIGVNYRPDQEPNDIALIGEGVRKVYEEV 257

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     I+ E G  ++     L T V    E  +  + VD+S    +   +     
Sbjct: 258 LTSAGLGQVKIFTELGRFMLAPHGALVTRVTHKKETYRTYLGVDASAVNLMRPAMYGAYH 317

Query: 279 A--TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
               +    GP     V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HISNVTHPDGPAEAVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                   +   +G  + IR      DY+  L
Sbjct: 378 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 409


>gi|225022820|ref|ZP_03712012.1| hypothetical protein CORMATOL_02865 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224944427|gb|EEG25636.1| hypothetical protein CORMATOL_02865 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 452

 Score =  189 bits (479), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 62/406 (15%), Positives = 118/406 (29%), Gaps = 45/406 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP  ++D+    +               +  A K F    +   +N+       +S  E
Sbjct: 45  GTPVMVVDEIDFRSRCRDMARAFGGPEH-VHYASKAFMTSRIVQWVNEEGLSLDIASHGE 103

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +++     F  E  A +   KD              +I ++  ++      A +L   + 
Sbjct: 104 LLVALHAGFPAERIAAHGNNKDAAFLRDCVSKGVGFVILDSHQEIEDLHAIATELGRTQD 163

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNNCE 168
           + +R+ P +               + G            +  +E     + GL  H   +
Sbjct: 164 VLIRVKPGIDAHTHEFISTAHEDQKFGFSLASGSALKAARRVVELPNLRLIGLHCHVGSQ 223

Query: 169 NKSFLCFSAMLKNIEKEFG------HFITQIEWISLGGGIHFTDKD-----------YPV 211
                 FS   + I K +           +   ++LGGG      +             +
Sbjct: 224 VFDAEGFSLAAERILKLYRTIIEECEVGEEFNILNLGGGYGIAYVEGEQPLDVEAVSTDL 283

Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLN------TTVLDISENIKNLVIVDSSV 265
                   E        I +EPG AI   +T           V       +  + VD  +
Sbjct: 284 LQRVNTYAERLHLTMPFIKVEPGRAIAGPSTVTVYTVGTVKDVTIDGGKTRRYISVDGGM 343

Query: 266 EAHVPDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISF 320
             ++   L   E      N           V G  C +GDI          ++ GD ++ 
Sbjct: 344 GDNIRPALYGAEYDIRLVNRSTDAPLIPTRVVGSHCESGDILINDRNLPEDIRPGDIVAL 403

Query: 321 EDVAGYNINRKNWFNGINMPTIAVKN--VDGTIKAIREFSYNDYYN 364
                Y  +  + +N +  P I       D     +R  +  D++N
Sbjct: 404 AATGAYCYSMSSRYNMMMRPAIVSVGAADDKAHLMVRRETLEDFFN 449


>gi|15617037|ref|NP_240250.1| diaminopimelate decarboxylase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219682344|ref|YP_002468728.1| diaminopimelate decarboxylase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|11386744|sp|P57513|DCDA_BUCAI RecName: Full=Diaminopimelate decarboxylase; Short=DAP
           decarboxylase
 gi|25290916|pir||H84980 diaminopimelate decarboxylase (EC 4.1.1.20) [imported] - Buchnera
           sp. (strain APS)
 gi|10039102|dbj|BAB13136.1| diaminopimelate decarboxylase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219622077|gb|ACL30233.1| diaminopimelate decarboxylase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|311086169|gb|ADP66251.1| diaminopimelate decarboxylase [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086741|gb|ADP66822.1| diaminopimelate decarboxylase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
          Length = 415

 Score =  188 bits (478), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 60/394 (15%), Positives = 115/394 (29%), Gaps = 42/394 (10%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+++ D   +   ++            +  A K  +   +   +        + SL E+ 
Sbjct: 27  PFWVYDADIIYKKINLLRKFDV-----IRFAQKSCSNINILRLMKNKNVKIDAVSLGEIE 81

Query: 65  LGH-EKFGG---ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
                 F     E         +  +  V      +   ++  L +    +      + L
Sbjct: 82  RALLSGFKPSTNEIIFTADILDEETLLKVAKYKIPVNAGSLDMLKQLGKIS--PGHHVWL 139

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKD----KIESEIKNVNGLMFHNNCENKSFLCFS 176
           RINP   Y      +     S+ G    +     I+     + GL  H            
Sbjct: 140 RINPRFGYGHSKKTNTGGENSKHGIWHPEQAIPIIKKYKLKLIGLHMHIGSGVNYLHLKK 199

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE----------KYS 226
                I+  F     +I  IS+GGG+    K        ++     +             
Sbjct: 200 VSQAMIKYAF-QLNQKISSISVGGGLPIPYKFNDQPIDIKKYFMLWDIARKKISKFLGEK 258

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285
           +++ +EPG  +V  +  L + V        KN V+VD      +   +            
Sbjct: 259 IELEIEPGRFLVAESGILISKVWATKKMGNKNFVLVDVGFNDLMRPTMYGSYHHISVIYG 318

Query: 286 GPYTAM--------VCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNINR 330
                         V G  C +GDIF        +      +K+GD + F D   Y    
Sbjct: 319 DDRKMNEKETIDTVVAGPLCESGDIFTQKEGGTVQTRKLPTIKVGDYLIFHDTGAYGAAM 378

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            + +N   +    +   + +I   R  +  +  N
Sbjct: 379 SSNYNTRPLIPEILLKNNDSIVIRRRQTIEEILN 412


>gi|123443530|ref|YP_001007503.1| diaminopimelate decarboxylase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122090491|emb|CAL13360.1| diaminopimelate decarboxylase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 420

 Score =  188 bits (478), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 53/398 (13%), Positives = 116/398 (29%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +  D + +   ++   +        +  A K  +   +   +++      S SL E+ 
Sbjct: 27  PVWAYDGEIITQKINQLRHFDV-----IRFAQKACSNIHILRLMHEQGVKVDSVSLGEIE 81

Query: 65  LGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
              +             +     D      ++     +   ++  L++    A      +
Sbjct: 82  RALQAGFQPGQEPAEIVFTADLLDQATLLRVTELSIPVNAGSIDMLDQLGQHA--SGHPV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G   +D       I+     + G+  H       +
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHEDLPQAIAKIQQYGLKLVGIHMHIGSGVD-Y 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-------- 224
                +   + ++       I  IS GGG+    +    +   +                
Sbjct: 199 QHLEQVCDAMVQQVIALGQDISAISAGGGLSIPYQFGDDEIDTEHYYGLWNSARERIAAH 258

Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V + +EPG  +V     L   V  + +   ++ V+VD+     +   +        
Sbjct: 259 LGHPVSLEIEPGRFLVAEAGVLIAQVRAVKNMGRRHYVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIFG-------EFHFEKPVKIGDRISFEDVAGY 326
                     N      +V G  C +GD+F        E        IGD + F D   Y
Sbjct: 319 VLPANGRSLANEPLIDTVVAGPLCESGDVFTQEAGGGLETRKLPAANIGDYLVFHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    +          R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFEQGQPRLIRRRQTIEEIIA 416


>gi|257867192|ref|ZP_05646845.1| diaminopimelate decarboxylase [Enterococcus casseliflavus EC30]
 gi|257873527|ref|ZP_05653180.1| diaminopimelate decarboxylase [Enterococcus casseliflavus EC10]
 gi|257801248|gb|EEV30178.1| diaminopimelate decarboxylase [Enterococcus casseliflavus EC30]
 gi|257807691|gb|EEV36513.1| diaminopimelate decarboxylase [Enterococcus casseliflavus EC10]
          Length = 438

 Score =  188 bits (478), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 66/400 (16%), Positives = 123/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+    ++             + +  +   A K F    M   +          S 
Sbjct: 25  GTPLYVYSVSEIREECQKIQAQFLTRYSKTRAAYAAKAFCTTAMLQVIKSEGLSLDVVSG 84

Query: 61  YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK- 116
            E+       F  E   +N   K  +    A+      II + + ++   +   Q+    
Sbjct: 85  GELYTAIQADFPAEHIEFNGNNKSIEELAAALDYGVGRIIVDGIQEVGLIRALCQEKQVV 144

Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
            KI LRI P VS S        +  S+ G            ++ I++   +  GL FH  
Sbjct: 145 AKILLRITPEVSVSTHQFISTGQKDSKFGIPLDEEILFPLVEEVIQAPELDFYGLHFHVG 204

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWI----SLGGGI-----------HFTDKDYPV 211
            +        A +            + ++     ++GGG             ++    PV
Sbjct: 205 SQLSDNRSHLAAVDAALALVQTIHERFDYWIKELNVGGGFGVRYTDADIRQPYSYFLDPV 264

Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269
            +         +     I +EPG +IV        T+  I           +D  +  ++
Sbjct: 265 MEKIDAFYAQHQSERPTIVIEPGRSIVAEAGISLHTIGSIKTLPGIRTYASIDGGMTDNI 324

Query: 270 PDYLLYQESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       I  N           + G++C + DI  +     PV+ GD  +      
Sbjct: 325 RPGLYQATYTGILANRASEAATQKVTISGKACESTDILVKDLALPPVETGDLFATFATGA 384

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  + +N + +P +          A++  SY     N
Sbjct: 385 YGYSMASSYNNLQIPAVVFVENGQAELAVKRQSYEQMLQN 424


>gi|318606976|emb|CBY28474.1| diaminopimelate decarboxylase [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 420

 Score =  188 bits (478), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 53/398 (13%), Positives = 116/398 (29%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +  D + +   ++   +        +  A K  +   +   +++      S SL E+ 
Sbjct: 27  PVWAYDGEIITQKINQLRHFDV-----IRFAQKACSNIHILRLMHEQGVKVDSVSLGEIE 81

Query: 65  LGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
              +             +     D      ++     +   ++  L++    A      +
Sbjct: 82  RALQAGFQPGQEPAEIVFTADLLDQATLLRVTELSIPVNAGSIDMLDQLGLHA--SGHPV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G   +D       I+     + G+  H       +
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHEDLPQAIAKIQQYGLKLVGIHMHIGSGVD-Y 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-------- 224
                +   + ++       I  IS GGG+    +    +   +                
Sbjct: 199 QHLEQVCDAMVQQVIALGQDISAISAGGGLSIPYQFGDDEIDTEHYYGLWNSARERIAAH 258

Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V + +EPG  +V     L   V  + +   ++ V+VD+     +   +        
Sbjct: 259 LGHPVSLEIEPGRFLVAEAGVLIAQVRAVKNMGRRHYVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIFG-------EFHFEKPVKIGDRISFEDVAGY 326
                     N      +V G  C +GD+F        E        IGD + F D   Y
Sbjct: 319 VLPADGRSLANEPLIDTVVAGPLCESGDVFTQEAGGGLETRKLPAANIGDYLVFHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    +          R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFEQGQPRLIRRRQTIEELIA 416


>gi|315443350|ref|YP_004076229.1| diaminopimelate decarboxylase [Mycobacterium sp. Spyr1]
 gi|315261653|gb|ADT98394.1| diaminopimelate decarboxylase [Mycobacterium sp. Spyr1]
          Length = 472

 Score =  188 bits (478), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 54/406 (13%), Positives = 117/406 (28%), Gaps = 45/406 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ID+    +            G  +  A K F    +   +++       ++  E
Sbjct: 64  GTPVFVIDEADFRSRCRDISSAFGG-GEYVHYAAKAFLCGEIARWVDEEGLSLDVATGGE 122

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           + +     F       +   K       AV      ++ +++ ++ +    A    + + 
Sbjct: 123 LAIALHAGFPAGRITVHGNNKSVAELTAAVKHGVGHVVVDSIIEIERLDRIAADNGVVQD 182

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G         E  +   E+    + GL  H   +
Sbjct: 183 VLVRVTVGVEAHTHEFISTAHEDQKFGLSLASGAAMEAVRRVFEAGNLRLVGLHSHIGSQ 242

Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F          +      F  +    ++ + LGGG+  +            L  
Sbjct: 243 IFDVAGFEIAAHRVIGLLRDVVAEFGVEKTSQMDIVDLGGGLGISYLPDDNPPPMSELAA 302

Query: 221 FSEKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS----- 264
             +               ++ +EPG AI    T     V  + +   +            
Sbjct: 303 KLKAIVARESAAVGLPAPKLVVEPGRAIAGPGTITLYEVGTVKDVAVSPTSHRRYVSVDG 362

Query: 265 -VEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318
            +  ++   L   E      +   +  P  + V G+ C +GDI     +    V  GD +
Sbjct: 363 GMSDNIRTSLYGAEYDVRLLSRVSDATPTLSRVVGKHCESGDIVVRDAWLSEDVTPGDLL 422

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
                  Y  +  + +N I  P +           +R  +  D  +
Sbjct: 423 GVAATGAYCYSMSSRYNLIGRPAVVAVRDGRARLILRRETVEDLLS 468


>gi|146312925|ref|YP_001177999.1| diaminopimelate decarboxylase [Enterobacter sp. 638]
 gi|145319801|gb|ABP61948.1| diaminopimelate decarboxylase [Enterobacter sp. 638]
          Length = 420

 Score =  188 bits (478), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 55/398 (13%), Positives = 115/398 (28%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIVREKIAALHQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D    A +      +   +V  L +    +     ++
Sbjct: 82  RALAAGYDPQADSDAIVFTADLIDSATLARVHELQIPVNAGSVDMLEQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G    D       ++     + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYADLPAALAVLQRYNLTLVGIHMHIGSGVDYT 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                    + +    F   +E IS GGG+               Y       R K  + 
Sbjct: 200 HLEQVCGAMVNQVI-DFGQDLEAISAGGGLSIPYREGEEAIDTDHYYGLWSAARDKISAH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             ++V++ +EPG  +V  +  L   V  +     ++ V++D+     +   +        
Sbjct: 259 LGHAVKLEIEPGRFLVAESGVLVAQVRSVKAMGSRHFVLIDAGFNDLMRPSMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                            +V G  C +GD+F        E      V+ GD +   D   Y
Sbjct: 319 ALAADGRDLTTAPQVDTVVAGPLCESGDVFTQQEGGKVETRALPVVQPGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    + +        R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFDHGVARLIRRRQTIQELLA 416


>gi|163840173|ref|YP_001624578.1| diaminopimelate decarboxylase [Renibacterium salmoninarum ATCC
           33209]
 gi|162953649|gb|ABY23164.1| diaminopimelate decarboxylase [Renibacterium salmoninarum ATCC
           33209]
          Length = 483

 Score =  188 bits (478), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 56/424 (13%), Positives = 115/424 (27%), Gaps = 61/424 (14%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA------GVKLLLALKCFAAWGMFDTLNQYMDGTT 56
            +P +++ +                A      GV +  A K F    +   +        
Sbjct: 56  GSPLFVVSETDFRRRAQEFYTAFNEAFTDICGGVDIYYAGKSFLCTEVARWVMDEGLRLD 115

Query: 57  SSSLYEVMLG-HEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
           + S  E+++       GE    +   K       A+      I+ +++ ++ +    A  
Sbjct: 116 TCSGGEMLVAQRAGVPGEKLGLHGNNKSDAEIRRALEIGVGRIVADSLPEIERIDSIAAG 175

Query: 114 LHK--KIGLRINPSVSYSKFILADPNRPFSRLGE-----------------KCKDKIESE 154
           L    K+ LR+ P V               + G                    +  + + 
Sbjct: 176 LGTIAKVMLRLTPGVHAHTHEFIATAHEDQKFGLSLATAGQDASSQGANVSPAEQAVLAA 235

Query: 155 IKNVN----GLMFHNNCENKSFLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTD 206
               +    G+  H   +      F+   +                   + LGGG     
Sbjct: 236 HAGKHIEMLGIHCHIGSQIFDAEGFAVAAQRLLGFSADMKSRHGIDFVELDLGGGYGIAY 295

Query: 207 KDYPVKDFCQRLKEFSEK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDIS--- 252
            +         +                  + +I +EPG AIV  +T     V  +    
Sbjct: 296 TEADTPRQAAEIANEMAAVVRAECAELGLTAPRISIEPGRAIVGPSTFTLYQVGTVKTVV 355

Query: 253 ------ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDI 302
                    +  + VD  +  +    L   +   I  N         + V G+ C +GDI
Sbjct: 356 VDTPSGPAERRYISVDGGMSDNPRPVLYDADYTAILANRSSSADAVLSRVVGKHCESGDI 415

Query: 303 FGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361
                +    +  GD ++      Y     + +N +  P +           +R  +  D
Sbjct: 416 VVRDVYLPGDIIAGDLLAVPATGAYCWVLSSNYNYLPRPGVVAVRGGTARVIVRAETEED 475

Query: 362 YYNN 365
             + 
Sbjct: 476 LLSR 479


>gi|209545489|ref|YP_002277718.1| diaminopimelate decarboxylase [Gluconacetobacter diazotrophicus PAl
           5]
 gi|209533166|gb|ACI53103.1| diaminopimelate decarboxylase [Gluconacetobacter diazotrophicus PAl
           5]
          Length = 452

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 49/387 (12%), Positives = 109/387 (28%), Gaps = 28/387 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           + TP +++    L           ++AG    +  A+K      +   L     G    S
Sbjct: 47  VGTPTWVMGAGTLRARYRRLAGALRDAGLAPSIHFAVKANDHLAVLRILAAEGAGADVVS 106

Query: 60  LYEVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
             E+              ++     +D    AV      I   +  +L+   D A    +
Sbjct: 107 GGELRRARAAGIPAAGIVFSGVGKSRDELHLAVTEGIAHIAVESAEELDVVSDVAVAAGR 166

Query: 117 KIG--LRINPSVSYSKFILADPNRPFSRLGEK-----CKDKIESEIKNVNGLMFHNNCEN 169
                LR+NP V              ++ G             + +  ++ L F  +  +
Sbjct: 167 TARITLRVNPDVDAGTHEKITTGLSTNKFGIAYARAADLYARAAALPGLHPLGFSVHIGS 226

Query: 170 KSFLCFSAMLKNIE-----KEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEF 221
           +                  +        +  +  GGG+    +D            ++  
Sbjct: 227 QIVAMAPYRAAFARVADLVRAVRARGLSVGLVDCGGGLGIRYRDEVEGAPMALAGAIRAE 286

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDI---SENIKNLVIVDSSVEAHVPDYLLYQES 278
                V++ +EPG  +      L + V+      + +   +I+D+++       L     
Sbjct: 287 LGDLDVRLAIEPGRWLAGPAGVLLSRVILRKAGQDGLPPFLILDAAMNDLARPSLYDSWH 346

Query: 279 ATIYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
             +  +         +  V G  C + D F        +  G  ++  D   Y +   + 
Sbjct: 347 GILPLSARDAVQPVESVNVVGPVCESADSFATGRMLPRMGDGAAVALLDTGAYGMVMSST 406

Query: 334 FNGINMPTIAVKNVDGTIKAIREFSYN 360
           +NG  +    + +              
Sbjct: 407 YNGRPLAAQVLVDGGRWSVIRARQPVE 433


>gi|312194804|ref|YP_004014865.1| diaminopimelate decarboxylase [Frankia sp. EuI1c]
 gi|311226140|gb|ADP78995.1| diaminopimelate decarboxylase [Frankia sp. EuI1c]
          Length = 469

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 50/393 (12%), Positives = 113/393 (28%), Gaps = 39/393 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP + +D+                    +  A K F    +   +          +  E
Sbjct: 52  GTPAFFLDEDDFRARAQAWRAGF--PDGDVYYAGKAFLCRAVARWVADEGLSLDVCTGGE 109

Query: 63  VMLGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F      ++   K  +    AV      I+ ++ +++ +    A+     ++
Sbjct: 110 LAVAASVDFPPARLLFHGNNKSVEELRRAVAYGVGRIVLDSFAEIERLATVARAAGVRQR 169

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHNNC 167
           + +R+ P V           +   + G                  ++   + GL  H   
Sbjct: 170 VLIRVTPGVEAHTHEYIATGQEDQKFGFSLASGAALDAIGRVLAATDALELVGLHAHIGS 229

Query: 168 ENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223
           +      F      M+  +         ++  + LGGG+               + +   
Sbjct: 230 QIFDTAGFGLAAHRMVGLLATVRDAHGVELPELDLGGGLGIAYTGEDAPLPVADVADRLH 289

Query: 224 KYSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVP 270
               +             +EPG A+V  TT     V  + E    +  V VD  +  ++ 
Sbjct: 290 TIVGKECASAGLAVPRLAVEPGRAMVGPTTITLYRVGTVKELPGLRTYVSVDGGMSDNIR 349

Query: 271 DYLLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAG 325
             L          +       +   + G+ C +GD+          V  GD ++      
Sbjct: 350 TALYDARYTARLVSRPGAAEHHVVTLVGKHCESGDVVAHDVSLPADVAPGDLVAVPATGA 409

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFS 358
           Y+ +  + +N +  P +           +R  +
Sbjct: 410 YHRSMASNYNHVGRPPVVAVRAGAARVVVRRET 442


>gi|225855467|ref|YP_002736979.1| diaminopimelate decarboxylase [Streptococcus pneumoniae JJA]
 gi|225722559|gb|ACO18412.1| diaminopimelate decarboxylase [Streptococcus pneumoniae JJA]
          Length = 416

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 61/392 (15%), Positives = 115/392 (29%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   SS  
Sbjct: 19  PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78

Query: 62  EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++    +  G E    +    D E         TI  +    +   +  A        
Sbjct: 79  ELLMSHKLDFLGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERAAGIPEIISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169
                 V      + D     ++ G       E+         +   ++  L  +     
Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                   + +   +        +++I+L GGI    +     +    + E   K   + 
Sbjct: 198 YYPELARQLFELAVEIKEKLGIWLDFINLSGGIGVNYRPDQEPNDIALIGEGVRKVYEEV 257

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     I+ E G  ++     L T V    E  +  + VD+S    +   +     
Sbjct: 258 LTSAGLGQVKIFTELGRFMLAPHGALVTRVTHKKETYRTYLGVDASAVNLMRPAMYGAYH 317

Query: 279 A--TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
               +    GP     V G  C   D F         +IGD ++  D   +  +    +N
Sbjct: 318 HISNVTHPDGPAEAVDVVGSLCENNDKFAVNRELPHTEIGDLLAIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                   +   +G  + IR      DY+  L
Sbjct: 378 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 409


>gi|302670604|ref|YP_003830564.1| diaminopimelate decarboxylase LysA [Butyrivibrio proteoclasticus
           B316]
 gi|302395077|gb|ADL33982.1| diaminopimelate decarboxylase LysA [Butyrivibrio proteoclasticus
           B316]
          Length = 429

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 62/391 (15%), Positives = 119/391 (30%), Gaps = 29/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+YL D++ L++N          N G K   A+K      + + L     G   SS  
Sbjct: 19  PTPFYLYDEKGLVDNAKAVYDAFSWNKGFKEYFAVKATPNPVLMEILKSLGCGFDCSSET 78

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+ML       G    ++       E          I  +  + ++  ++   K+ + I 
Sbjct: 79  ELMLSQAIGASGADIMFSSNDTPAREYAYADKLGAIINLDDFTHIDFLEETIGKIPETIS 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE---------IKNVN-GLMFHNNCEN 169
            R NP   +        N   S+ G       E+             ++  L  +     
Sbjct: 139 CRYNPGGVFQMSNGIMDNPGDSKYGMTKDQLFEAYKILRSKGARNFGIHAFLASNTVTNE 198

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
                   + +   +       +I +I+L GG+    +     +  + + E   +    I
Sbjct: 199 YYPQLAGQLFELAVELQKETGCKIAFINLSGGVGIPYRPDQEANDIKAIGEGVRRQFENI 258

Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                      + E G  ++     L T  +      K  + VD+     +   +     
Sbjct: 259 LVPAGMGDVSIFTEMGRFMMGPYGALVTKAIHEKHIYKEYIGVDACAVNLMRPAMYGSYH 318

Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                            V G  C   D F        +++GD +   D   +       +
Sbjct: 319 HITVLGKENEPLDHVYDVTGSLCENNDKFAIDRQLPEIEMGDYLFIHDTGAHGYAMGYNY 378

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           NG       +   DG+++ IR   +  DY+ 
Sbjct: 379 NGKLKCAELLLKEDGSVQMIRRAETARDYFA 409


>gi|197284248|ref|YP_002150120.1| diaminopimelate decarboxylase [Proteus mirabilis HI4320]
 gi|194681735|emb|CAR40899.1| diaminopimelate decarboxylase [Proteus mirabilis HI4320]
          Length = 414

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 53/400 (13%), Positives = 125/400 (31%), Gaps = 46/400 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++   + +  +++            +  A K  +   +   + Q      S SL E
Sbjct: 18  GTPLWIYQGETISEHIEQLK-AFDV----VRFAQKACSNIHILRLMKQQGVKVDSVSLGE 72

Query: 63  VMLGH-EKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
           +       F G     E         +  I+ V+     +   ++  L +  ++      
Sbjct: 73  IERALVAGFQGGRERSEIIFTADLLDEKTIERVVELDIPVNAGSIDMLRQLGER--HQGH 130

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170
            + +RINP   +      +     S+ G   +D       I     ++ G   H      
Sbjct: 131 AVWIRINPGFGHGHSQKTNTGGENSKHGIWYEDVPEALAVINQYNLSLVGFHMHIGSGVD 190

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK------ 224
            +   +++   + ++       I+ IS GGG+    +    +          +       
Sbjct: 191 -YQHLASVCDAMVEQVLTSNVDIKAISAGGGLSTPYQQGDKRVDLNHYFSLWDSARQRIA 249

Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA 279
               + +++ +EPG  +V  +  L + V  +     ++ V+VD+     +   +      
Sbjct: 250 QHLGHDIELEIEPGRFLVAESGVLVSQVRAVKSMGNRHYVLVDAGFSDLMRPAMYGSYHQ 309

Query: 280 TIYPNTG--------PYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324
               +              +V G  C +GD+F +            P ++GD +   D  
Sbjct: 310 ITLLDKYGQLKSSEFQQETIVAGPLCESGDVFTQQEGGMVAPRLLPPAEVGDYLVIHDTG 369

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            Y  +  + +N   +    + +        R  +  +   
Sbjct: 370 AYGASMSSNYNSRPLIPEVLISQGIPQLIRRRQTIEELLA 409


>gi|281414194|ref|ZP_06245936.1| diaminopimelate decarboxylase [Micrococcus luteus NCTC 2665]
          Length = 490

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 59/425 (13%), Positives = 112/425 (26%), Gaps = 62/425 (14%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA------GVKLLLALKCFAAWGMFDTLNQYMDGTT 56
            TP  ++D+                A      G  +  A K            +      
Sbjct: 58  GTPLLVVDEDDFRARARAFREGFDAAFADLCGGADVYYAGKSMLTLSTARWAAEEGLRVD 117

Query: 57  SSSLYEVMLGHEK--FGGETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQK 113
           ++S  E+ +      +      +     D E+  A+ +    II +++ +L      A +
Sbjct: 118 TASGGELAIALATGVYPAHIGLHGNNKSDAELRTALEAGVGRIIVDSLDELTHLAALAAE 177

Query: 114 LHK--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNG----------- 160
                 + LR+ P V               + G            NV G           
Sbjct: 178 AGHRAPVMLRLTPGVHAHTHDFIATAHEDQKFGLSLAPASTDRDGNVAGRSPAAVAVDTA 237

Query: 161 ----------LMFHNNCENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTD 206
                     +  H   +      F      +L+ + +       ++  + LGGG     
Sbjct: 238 LATESIDLLGVHCHIGSQIFEAEGFGLAAGRVLEFLAEVKAEHGVELAELDLGGGHGIAY 297

Query: 207 KDYPVKDFCQRLKEFSEK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI 255
                      + +                  ++ LEPG AI         TV       
Sbjct: 298 TAVDEPRPAAEIADALADDVQKTVERLGLRCPRVSLEPGRAISGPAGLTLYTVGVTKTVD 357

Query: 256 ----------KNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGD 301
                     +  V VD  +  +    L   +     A       P  + V G+ C +GD
Sbjct: 358 ADAPDGGTAARRYVAVDGGMSDNPRPVLYDADYTAVSARRTSEAEPALSRVVGKHCESGD 417

Query: 302 IFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           I     +    +  GD ++      Y     + +N +  P +   +       IR  +  
Sbjct: 418 ILVRDVYLPADLGRGDLLAVPATGAYTHVMSSNYNALARPAVVAVSGGLARVIIRRETQE 477

Query: 361 DYYNN 365
           D +  
Sbjct: 478 DLFAR 482


>gi|325854990|ref|ZP_08171706.1| diaminopimelate decarboxylase [Prevotella denticola CRIS 18C-A]
 gi|327313297|ref|YP_004328734.1| diaminopimelate decarboxylase [Prevotella denticola F0289]
 gi|325483968|gb|EGC86908.1| diaminopimelate decarboxylase [Prevotella denticola CRIS 18C-A]
 gi|326946186|gb|AEA22071.1| diaminopimelate decarboxylase [Prevotella denticola F0289]
          Length = 385

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 68/372 (18%), Positives = 123/372 (33%), Gaps = 26/372 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALY-IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           I TP+Y  D   L   L      +R +A   +  A+K  A   +   ++Q   G    S 
Sbjct: 13  IDTPFYYYDCNLLRETLQAIHEEVRTHADFIVHYAVKANANAKVLKIISQAGMGADCVSG 72

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHK- 116
            E+    +  F   +  Y    K      +  + D   FN  +V++L      A +  K 
Sbjct: 73  GEIRRCLDSGFPAGSIVYAGVGKADWEINLGLDHDIFCFNVESVAELEVINSLAARKGKV 132

Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE 168
             +  RINP V      +       ++ G          ++          GL FH   +
Sbjct: 133 ANVCFRINPDVGAHTHKMITTGLAENKFGIAMQDMVPAIREAERMANIRFIGLHFHIGSQ 192

Query: 169 NKSFLCFSAML---KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK--DFCQRLKEFSE 223
                 +  +      I+        + E I++GGG+         K     +       
Sbjct: 193 ILDMTDYRHLCSRINEIQNGLEEQDIRAENINVGGGLGIDYTQPDSKAVPDFKAYFYTFA 252

Query: 224 KY-----SVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQE 277
           +Y       +++ E G A+V    +L T  L + +   K   IVD+ +   +   L +  
Sbjct: 253 RYLKLREGQKLHFELGRAVVGQMGSLITRTLYVKQGTAKQFAIVDAGMTDLIRPALYHAR 312

Query: 278 SA--TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                +  +       V G  C + D+F +      V  GD I+      Y     + +N
Sbjct: 313 HEIENLSSDGPEQIYDVVGPICESSDVFAKDIPLNTVHRGDLIALRSAGAYGEIMASQYN 372

Query: 336 GINMPTIAVKNV 347
              +P   + + 
Sbjct: 373 CRRLPVGYLSDE 384


>gi|148989978|ref|ZP_01821253.1| OxaA-like protein precursor [Streptococcus pneumoniae SP6-BS73]
 gi|149007453|ref|ZP_01831096.1| OxaA-like protein precursor [Streptococcus pneumoniae SP18-BS74]
 gi|149021928|ref|ZP_01835915.1| OxaA-like protein precursor [Streptococcus pneumoniae SP23-BS72]
 gi|147761025|gb|EDK67994.1| OxaA-like protein precursor [Streptococcus pneumoniae SP18-BS74]
 gi|147924638|gb|EDK75724.1| OxaA-like protein precursor [Streptococcus pneumoniae SP6-BS73]
 gi|147929966|gb|EDK80954.1| OxaA-like protein precursor [Streptococcus pneumoniae SP23-BS72]
 gi|332071955|gb|EGI82443.1| pyridoxal-dependent decarboxylase, C-terminal sheet domain protein
           [Streptococcus pneumoniae GA17545]
          Length = 416

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 61/392 (15%), Positives = 114/392 (29%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   SS  
Sbjct: 19  PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78

Query: 62  EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++    +  G E    +    D E         TI  +    +   +  A        
Sbjct: 79  ELLMSHKLDFLGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERAAGIPEIISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169
                 V      + D     ++ G       E+         +   ++  L  +     
Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                   + +   +        +++I+L GGI    +     +    + E   K   + 
Sbjct: 198 YYPELARQLFELAVEIKEKLGIWLDFINLSGGIGVNYRPDQEPNDIALIGEGVRKVYEEV 257

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     I+ E G  ++     L T V    E  +  + VD+S    +   +     
Sbjct: 258 LTSAGLGQVKIFTELGRFMLAPHGALVTRVTHKKETYRTYLGVDASAVNLMRPAMYGAYH 317

Query: 279 A--TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
               +    GP     V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HISNVTHPDGPAEAVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                   +   +G  + IR      DY+  L
Sbjct: 378 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 409


>gi|150006338|ref|YP_001301082.1| diaminopimelate decarboxylase [Bacteroides vulgatus ATCC 8482]
 gi|254881754|ref|ZP_05254464.1| diaminopimelate decarboxylase [Bacteroides sp. 4_3_47FAA]
 gi|294776142|ref|ZP_06741633.1| diaminopimelate decarboxylase [Bacteroides vulgatus PC510]
 gi|319643721|ref|ZP_07998337.1| diaminopimelate decarboxylase [Bacteroides sp. 3_1_40A]
 gi|149934762|gb|ABR41460.1| diaminopimelate decarboxylase [Bacteroides vulgatus ATCC 8482]
 gi|254834547|gb|EET14856.1| diaminopimelate decarboxylase [Bacteroides sp. 4_3_47FAA]
 gi|294450016|gb|EFG18525.1| diaminopimelate decarboxylase [Bacteroides vulgatus PC510]
 gi|317384663|gb|EFV65626.1| diaminopimelate decarboxylase [Bacteroides sp. 3_1_40A]
          Length = 386

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 63/366 (17%), Positives = 116/366 (31%), Gaps = 26/366 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           ++TP+Y  D   L   L        K     +  A+K  A   +   + +   G    S 
Sbjct: 13  LETPFYYYDVNVLRETLSCINKEAGKYNNFCVHYAVKANANHKVLTIIRESGLGADCVSG 72

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLH 115
            E+       F      Y    K      +  + D   FN  +V +L    + A  +   
Sbjct: 73  GEIRAAIKAGFPTNKIVYAGVGKTDWEINLGLDYDIFCFNVESVPELEIINELAAAKGKT 132

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168
            ++  RINP+V              ++ G   +D                 GL FH   +
Sbjct: 133 ARVAFRINPNVGAHTHANITTGLAENKFGISMEDMDKVIDMAGTLPHVKFVGLHFHIGSQ 192

Query: 169 NKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
                 F A+   + +           +E I++GGG+         +      + F+  +
Sbjct: 193 ILDMGDFVALCNRVNELQEKLYARQIIVEHINVGGGLGIDYAHPNRQAIPNFTEYFATYH 252

Query: 226 SV-------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL--Y 275
                     ++ E G A+V    +L + V+ + +       + D+ +   +   L   Y
Sbjct: 253 KHLKLRPQQTLHFELGRAVVGQCGSLISKVIYVKQGTNKQFAILDAGMTDLIRPALYQAY 312

Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
            +   I       T  V G  C + D+FG+         GD  +      Y     + +N
Sbjct: 313 HKIENITSEEPMETYDVVGPICESSDVFGKAIDLNKAHRGDLFALRSAGAYGEIMASAYN 372

Query: 336 GINMPT 341
              +P 
Sbjct: 373 CRALPK 378


>gi|225026452|ref|ZP_03715644.1| hypothetical protein EUBHAL_00701 [Eubacterium hallii DSM 3353]
 gi|224956218|gb|EEG37427.1| hypothetical protein EUBHAL_00701 [Eubacterium hallii DSM 3353]
          Length = 417

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 60/392 (15%), Positives = 114/392 (29%), Gaps = 31/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   GT  SSL 
Sbjct: 20  PTPFHLYDEKGIRQTARDLYKAFSWNEGFKEYFAVKATPTPAILKILQEEGCGTDCSSLT 79

Query: 62  EVMLG-HEKF-GGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+M+     F  G +  ++       E          I  + ++ ++  KD      +  
Sbjct: 80  ELMMSDRCGFADGNSIMFSSNETPAEEFILAKKLGAIINLDDITHIDFLKDACGIPERIC 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES----EIKNVNGLMFH------NNCE 168
                         + D     ++ G       E+    + + V     H          
Sbjct: 140 CRYNPGGYFSLGTDIMDNPG-DAKYGMTKPQIFEAFKRLKREGVKEFGIHSFLASNTVSN 198

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
                  S +     +   +    I +I+L GG+          +    + E   K   +
Sbjct: 199 EYYPALASILFNLAVELKENLGVHIGFINLSGGVGIPYTPDKEPNDIFAIGEGVRKAYEE 258

Query: 229 I-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
           I           + E G  ++     L    +      K  + VD+     +   +    
Sbjct: 259 ILVPAGMGDVKIFTELGRFMLAPHGHLVVKAIHEKHTYKEYIGVDACAANLMRPAMYGAY 318

Query: 278 SATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                         +T  V G  C   D F        + +GD +   D   +  +    
Sbjct: 319 HHITVMGKENEPCDHTYDVVGSLCENNDKFAIDRKLPKIDMGDLLVLHDTGAHGFSMGYN 378

Query: 334 FNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           +NG       +   DG+ + IR   +  DY+ 
Sbjct: 379 YNGRLKSAEILLQEDGSTRMIRRAETPEDYFA 410


>gi|32475756|ref|NP_868750.1| diaminopimelate decarboxylase [Rhodopirellula baltica SH 1]
 gi|32446299|emb|CAD76127.1| diaminopimelate decarboxylase [Rhodopirellula baltica SH 1]
          Length = 427

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 55/390 (14%), Positives = 113/390 (28%), Gaps = 31/390 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+ L  +  +             N G +   A+K      +   + +   G   SS+ 
Sbjct: 21  PTPFVLYHEDGIRARARELTDAFAWNEGFQQYFAVKATPNPHIVAMMAEEGGGADCSSVA 80

Query: 62  EVMLG-HEKFGGETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E++        G+   +       E  +        I  +T   +++    +        
Sbjct: 81  ELITCERLGITGQDVMFTSNNTTMEEFEIANKLGAIINLDTPHHIDQIAQLSPLPEMVS- 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSFL 173
                     +  +   +   ++ G   +  ++   +         GL         +  
Sbjct: 140 -FRFNPGPERQGNVIIGDPKEAKFGSTREQLMDGYRRCAELGISRFGLHAMVVSNELNIE 198

Query: 174 ----CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227
                   + +   +        +E I+LGGGI    +            +   K     
Sbjct: 199 ALLQTAEMLFELAAEIHRETGISVECINLGGGIGVPYQPGQEPVDLPAFGDGVRKLYESI 258

Query: 228 ---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                    +I +E G A+      L T V++   + K+ V VD+ +   +   +     
Sbjct: 259 LVPAGIAPVRILMENGRAMTGPFGYLITKVINQKSSYKDYVGVDACMSNLMRPGMYGAYH 318

Query: 279 ATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                         T  + G  C   D F         ++GD     D   +  +    +
Sbjct: 319 HITVMGKEDQPADRTVDIVGSLCENNDKFAIDRKMPATEVGDIAVIHDAGAHGHSMGFQY 378

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYY 363
           NG       V N  G  +AIR   +++DY+
Sbjct: 379 NGRLRSAEIVFNDAGEFRAIRRAETFDDYF 408


>gi|212691487|ref|ZP_03299615.1| hypothetical protein BACDOR_00979 [Bacteroides dorei DSM 17855]
 gi|237726231|ref|ZP_04556712.1| diaminopimelate decarboxylase [Bacteroides sp. D4]
 gi|265751775|ref|ZP_06087568.1| diaminopimelate decarboxylase [Bacteroides sp. 3_1_33FAA]
 gi|212665967|gb|EEB26539.1| hypothetical protein BACDOR_00979 [Bacteroides dorei DSM 17855]
 gi|229434757|gb|EEO44834.1| diaminopimelate decarboxylase [Bacteroides dorei 5_1_36/D4]
 gi|263236567|gb|EEZ22037.1| diaminopimelate decarboxylase [Bacteroides sp. 3_1_33FAA]
          Length = 386

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 64/366 (17%), Positives = 114/366 (31%), Gaps = 26/366 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           ++TP+Y  D   L   L        K     +  A+K  A   +   + +   G    S 
Sbjct: 13  LETPFYYYDVNVLRETLSCINKEAGKYNNFCVHYAVKANANHKVLTIIRESGLGADCVSG 72

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHKK 117
            E+       F      Y    K      +  + D   FN  +V +L    + A    K 
Sbjct: 73  GEIRAAIKAGFPTNKIVYAGVGKTDWEINLGLDYDIFCFNVESVPELEIINELASAKGKT 132

Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168
                RINP+V              ++ G   +D                 GL FH   +
Sbjct: 133 ARVAFRINPNVGAHTHANITTGLAENKFGISMEDMDKVIDMAGTLPHVKFVGLHFHIGSQ 192

Query: 169 NKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
                 F A+   + +           +E I++GGG+         +      + F+  +
Sbjct: 193 ILDMGDFVALCNRVNELQEKLYARQIIVEHINVGGGLGIDYAHPNRQAIPNFTEYFATYH 252

Query: 226 SV-------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL--Y 275
                     ++ E G A+V    +L + V+ + +       + D+ +   +   L   Y
Sbjct: 253 KHLKLRPQQTLHFELGRAVVGQCGSLISKVIYVKQGANKQFAILDAGMTDLIRPALYQAY 312

Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
            +   I       T  V G  C + D+FG+         GD  +      Y     + +N
Sbjct: 313 HKIENITSEEPMETYDVVGPICESSDVFGKAIDLNKAHRGDLFALRSAGAYGEIMASAYN 372

Query: 336 GINMPT 341
              +P 
Sbjct: 373 CRALPK 378


>gi|284007782|emb|CBA73630.1| diaminopimelate decarboxylase [Arsenophonus nasoniae]
          Length = 414

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 58/400 (14%), Positives = 118/400 (29%), Gaps = 46/400 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D + +   +             +  A K  +   +   + +      + SL E
Sbjct: 14  GTPIWIYDSEVITQAIKQL-SAFDV----IRFAQKACSNIHILRLMREQGVKVDAVSLGE 68

Query: 63  VMLGH-EKFGG----ETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
           +       F          +     + +    +   D  +   ++  L +      K H 
Sbjct: 69  IERALVAGFRPGSEKAEIVFTADVIEKQTIERVIELDIPVNVGSIDMLVQLGKA--KRHH 126

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170
            I LRINP   +      +     S+ G    D       I      + G+  H      
Sbjct: 127 PIWLRINPGFGHGHSQKTNTGGENSKHGIWFSDLPLAIEKINQYQLMLVGMHMHIGSGVD 186

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK-- 224
            +   + +   + ++       I+ IS GGG+        +   +  +        E+  
Sbjct: 187 -YCHLAKVCDAMVEQVILSGCDIQAISAGGGLSIPYHLAEERIDINHYFALWHGARERIS 245

Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279
               + + + +EPG  +V  +  L   V  +    KN  I VDS     +   +      
Sbjct: 246 AYLGHPITLEIEPGRYLVAESGVLLAEVRAVKRMGKNHYILVDSGFNDLMRPTMYGCYHH 305

Query: 280 --------TIYPNTGPYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324
                       N      +V G  C +GD+F +             + +GD + F D  
Sbjct: 306 ISVLAADNRDLTNENLRETLVAGPLCESGDVFTQANNGAVVPRLLPEIYVGDYLVFHDTG 365

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            Y  +  + +N   +    +          R  +  +   
Sbjct: 366 AYGASMSSNYNSRPLIAEVMYLNGEPKLIRRRQTLAELLA 405


>gi|328907552|gb|EGG27318.1| diaminopimelate decarboxylase [Propionibacterium sp. P08]
          Length = 478

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 66/405 (16%), Positives = 130/405 (32%), Gaps = 45/405 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y++D+      + T       +G  +  A K F    +   ++Q      + +  E
Sbjct: 63  GSPLYVLDESDFRQRVRTFRDAF--SGWDVYYAGKAFLTRTIASWIDQEGLCLDTCTGGE 120

Query: 63  VMLGHEK-FGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117
           ++   +          +   K  D    A+ +    II +++ ++ + +   ++   H +
Sbjct: 121 LLTALQGGMDPARIGLHGNNKSVDELKLALSAGVGRIIVDSLDEITRIEQLCRENGWHAR 180

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G                 S + ++ G+  H   +
Sbjct: 181 VMVRVTAGVEAHTHEYIATAHEDQKFGFSITNGAAMVAMVRCHTSNVIDLLGIHSHIGSQ 240

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F       +K +E+      + +  + LGGG              + L E   +
Sbjct: 241 IFDTAGFEVAARRTMKLLEQFRQATGSALAELDLGGGFGIAYTSQDSPATAESLAEALRE 300

Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDSSVEA 267
                          I LEPG AIV  TT    TV  +          +  V VD  +  
Sbjct: 301 IVAVEARGRGMEIPHISLEPGRAIVGPTTMALYTVGTVKPVDLDTGAQRIYVSVDGGMSD 360

Query: 268 HVPDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFED 322
           ++   L   E + +  N      P    V G+ C AGDI     +    V  GD I+   
Sbjct: 361 NIRPALYAAEYSAVVANRASKIAPVLCRVVGKHCEAGDILVRDVYLPGDVSPGDVIAVPG 420

Query: 323 VAGYNINRKNWFNGINMPTIAVK---NVDGTIKAIREFSYNDYYN 364
              Y+ +  + +N +    +      +       +R  S +D   
Sbjct: 421 AGAYSRSMASNYNHVPRSAVVRVGTGDDPDVSVLLRRESIDDLLA 465


>gi|314927466|gb|EFS91297.1| diaminopimelate decarboxylase [Propionibacterium acnes HL044PA1]
          Length = 478

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 66/405 (16%), Positives = 130/405 (32%), Gaps = 45/405 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y++D+      + T       +G  +  A K F    +   ++Q      + +  E
Sbjct: 63  GSPLYVLDESDFRQRVRTFRDAF--SGWDVYYAGKAFLTRTIASWIDQEGLCLDTCTGGE 120

Query: 63  VMLGHEK-FGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117
           ++   +          +   K  D    A+ +    II +++ ++ + +   ++   H +
Sbjct: 121 LLTALQGGMDPARIGLHGNNKSVDELKLALSAGVGRIIVDSLDEITRIEQLCRENGWHAR 180

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G                 S + ++ G+  H   +
Sbjct: 181 VMVRVTAGVEAHTHEYIATAHEDQKFGFSITNGAAMVAMVRCHTSNVIDLLGIHSHIGSQ 240

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F       +K +E+      + +  + LGGG              + L E   +
Sbjct: 241 IFDTAGFEVAARRTMKLLEQFRQATGSALAELDLGGGFGIAYTSQDSPATAESLAEALRE 300

Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDSSVEA 267
                          I LEPG AIV  TT    TV  +          +  V VD  +  
Sbjct: 301 IVAVEARGRGMEIPHISLEPGRAIVGPTTMALYTVGTVKPVDLDTGAQRIYVSVDGGMSD 360

Query: 268 HVPDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFED 322
           ++   L   E + +  N      P    V G+ C AGDI     +    V  GD I+   
Sbjct: 361 NIRPALYAAEYSAVVANRASKIAPVLCRVVGKHCEAGDILVRDVYLPGDVSPGDVIAVPG 420

Query: 323 VAGYNINRKNWFNGINMPTIAVK---NVDGTIKAIREFSYNDYYN 364
              Y+ +  + +N +    +      +       +R  S +D   
Sbjct: 421 AGAYSRSMASNYNHVPRSAVVRVGTGDDPDVSVLLRRESIDDLLA 465


>gi|313837653|gb|EFS75367.1| diaminopimelate decarboxylase [Propionibacterium acnes HL037PA2]
 gi|314972593|gb|EFT16690.1| diaminopimelate decarboxylase [Propionibacterium acnes HL037PA3]
          Length = 478

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 66/405 (16%), Positives = 130/405 (32%), Gaps = 45/405 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y++D+      + T       +G  +  A K F    +   ++Q      + +  E
Sbjct: 63  GSPLYVLDESDFRQRVRTFRDAF--SGWDVYYAGKAFLTRTIASWIDQEGLCLDTCTGGE 120

Query: 63  VMLGHEK-FGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKK 117
           ++   +          +   K  D    A+ +    II +++ ++ + +   ++   H +
Sbjct: 121 LLTALQGGMDPARIGLHGNNKSVDELKLALSAGVGRIIVDSLDEITRIEQLCRENGWHAR 180

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G                 S + ++ G+  H   +
Sbjct: 181 VMVRVTAGVEAHTHEYIATAHEDQKFGFSITNGAAMVAMVRCHTSNVIDLLGIHSHIGSQ 240

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F       +K +E+      + +  + LGGG              + L E   +
Sbjct: 241 IFDTAGFEVAARRTMKLLEQFRQATGSALAELDLGGGFGIAYTSQDSPATAESLAEALRE 300

Query: 225 -----------YSVQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDSSVEA 267
                          I LEPG AIV  TT    TV  +          +  V VD  +  
Sbjct: 301 IVAVEARGRGMEIPHISLEPGRAIVGPTTMALYTVGTVKPVDLDTGAQRIYVSVDGGMSD 360

Query: 268 HVPDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFED 322
           ++   L   E + +  N      P    V G+ C AGDI     +    V  GD I+   
Sbjct: 361 NIRPALYAAEYSAVVANRASKIAPVLCRVVGKHCEAGDILVRDVYLPGDVSPGDVIAVPG 420

Query: 323 VAGYNINRKNWFNGINMPTIAVK---NVDGTIKAIREFSYNDYYN 364
              Y+ +  + +N +    +      +       +R  S +D   
Sbjct: 421 AGAYSRSMASNYNHVPRSAVVRVGTGDDPDVSVLLRRESIDDLLA 465


>gi|227357849|ref|ZP_03842197.1| diaminopimelate decarboxylase [Proteus mirabilis ATCC 29906]
 gi|227161959|gb|EEI46977.1| diaminopimelate decarboxylase [Proteus mirabilis ATCC 29906]
          Length = 414

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 52/400 (13%), Positives = 124/400 (31%), Gaps = 46/400 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++   + +  +++            +  A K  +   +   + Q      S SL E
Sbjct: 18  GTPLWIYQGETISEHIEQLK-AFDV----VRFAQKACSNIHILRLMKQQGVKVDSVSLGE 72

Query: 63  VMLGH-EKFGGET----HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
           +       F G        +     D +    +   D  +   ++  L +  ++      
Sbjct: 73  IERALVAGFQGGRERSEIVFTADLLDEKTIERVVELDIPVNAGSIDMLRQLGER--HQGH 130

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170
            + +RINP   +      +     S+ G   +D       I     ++ G   H      
Sbjct: 131 AVWIRINPGFGHGHSQKTNTGGENSKHGIWYEDVPEALAVINQYNLSLVGFHMHIGSGVD 190

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK------ 224
            +   +++   + ++       I+ IS GGG+    +    +          +       
Sbjct: 191 -YQHLASVCDAMVEQVLTSNVDIKAISAGGGLSTPYQQGDKRVDLNHYFSLWDSARQRIA 249

Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA 279
               + +++ +EPG  +V  +  L + V  +     ++ V+VD+     +   +      
Sbjct: 250 QHLGHDIELEIEPGRFLVAESGVLVSQVRAVKSMGNRHYVLVDAGFSDLMRPAMYGSYHQ 309

Query: 280 TIYPNTG--------PYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVA 324
               +              +V G  C +GD+F +            P ++GD +   D  
Sbjct: 310 ITLLDKYGQLKSSEFQQETIVAGPLCESGDVFTQQEGGMVAPRLLPPAEVGDYLVIHDTG 369

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            Y  +  + +N   +    + +        R  +  +   
Sbjct: 370 AYGASMSSNYNSRPLIPEVLISQGIPQLIRRRQTIEELLA 409


>gi|21672689|ref|NP_660756.1| diaminopimelate decarboxylase [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|25008347|sp|Q8K9C4|DCDA_BUCAP RecName: Full=Diaminopimelate decarboxylase; Short=DAP
           decarboxylase
 gi|21623329|gb|AAM67967.1| diaminopimelate decarboxylase [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 415

 Score =  188 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 59/396 (14%), Positives = 123/396 (31%), Gaps = 42/396 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           ++P+++ D   +   ++            +  A K  +   +   + Q      + SL E
Sbjct: 25  QSPFWVYDSNIIHKKINLLKEFD-----IVRFAQKACSNIHILRLMKQKNIKVDAVSLGE 79

Query: 63  VMLGH-EKFGG---ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           +       F     E       + +  +  V+     +   ++  L +    +      +
Sbjct: 80  IERALVAGFKPNSNEIIFTADLFDEETLSKVIDFKIPVNAGSIDMLEQLGKLS--PGHHV 137

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK----IESEIKNVNGLMFHNNCENKSFLC 174
            LRINP   +      +     S+ G          I+     + GL  H       +  
Sbjct: 138 WLRINPGFGHGHSKKTNTGGENSKHGIWNPRLAIPIIKKYKLKLIGLHMHIGSGVN-YKH 196

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK---------- 224
              + + + ++      +I +IS GGG+             ++     ++          
Sbjct: 197 LKKVGQAMIEKAMEINEKILFISAGGGLPIPYTFNEKPIDTKKYFIIWDEARKKISRFLN 256

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +Q+ +EPG  +V  +  L + V  I     KN V++D+     +   +          
Sbjct: 257 TPIQLEIEPGRFLVAESGILISQVRAIKKMGDKNFVLIDAGFNDLMRPTMYGSYHHVSVV 316

Query: 284 NTGPYTAM--------VCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNI 328
                           + G  C +GDIF               +KIGD + F DV  Y  
Sbjct: 317 TKDDRNIHETETIDTIIGGPLCESGDIFTQKEGGNITTRKLPILKIGDYLIFHDVGAYGA 376

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +  + +N   +    +   +      R    N+  N
Sbjct: 377 SMSSNYNTRPLIQEILLENNTFRTIRRRQKINELLN 412


>gi|255532226|ref|YP_003092598.1| diaminopimelate decarboxylase [Pedobacter heparinus DSM 2366]
 gi|255345210|gb|ACU04536.1| diaminopimelate decarboxylase [Pedobacter heparinus DSM 2366]
          Length = 384

 Score =  188 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 70/361 (19%), Positives = 122/361 (33%), Gaps = 25/361 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TP+Y  D   L N L+      K     +  ALK      +   +     G    S  
Sbjct: 13  LETPFYYYDLNLLQNTLNACANAAKLYNFHVHYALKANFNPAVLKKVKAIGFGADCVSGG 72

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKAQKLHK-- 116
           EV    E  F  +   +    K  +   +  + D   FN  +V +L    + A K  K  
Sbjct: 73  EVNRAIETGFNPKQVVFAGVGKSDKEINLALDQDIFCFNVESVQELEVINELAGKKGKIA 132

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCEN 169
           KI +RINP+V              ++ G          +    SE     G+ FH   + 
Sbjct: 133 KIAIRINPNVDAHTHHNITTGLDENKFGVNSWDLPKCVETLKVSEHLEFLGIHFHIGSQI 192

Query: 170 KSFLCFSAML---KNIEKEFGHFITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEF 221
            +   +  +          F      ++ +++GGG+     +          + +   EF
Sbjct: 193 TNLDVYKNLCVRVNEFAIWFEERGFNVKILNVGGGLGIDYHNPEQQIPDFDAYFKIFSEF 252

Query: 222 SE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESA 279
            E K   +++ E G A+V    +L + VL I    K   +V D+ +   +   L      
Sbjct: 253 LEVKAGQEVHFELGRALVGQCASLISRVLYIKNGKKKNFVVLDAGMTELMRPALYQAYHK 312

Query: 280 TIYPNTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
               + G  T     + G  C + D FG+   +     GD  +      Y     + +N 
Sbjct: 313 IENLSRGNQTTLKYDIVGPICESTDCFGKEVEQPESFRGDLYAIRSAGAYGEVMASKYNL 372

Query: 337 I 337
            
Sbjct: 373 R 373


>gi|57239261|ref|YP_180397.1| diaminopimelate decarboxylase [Ehrlichia ruminantium str.
           Welgevonden]
 gi|57161340|emb|CAH58263.1| putative diaminopimelate decarboxylase [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 420

 Score =  188 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 70/384 (18%), Positives = 129/384 (33%), Gaps = 22/384 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y      + NN         N    +  A+K  +   +   L+    G  + S  
Sbjct: 30  IGTPVYCYSLNAIKNNYIQFKENLPN-NSIICYAVKSNSNLSILSLLSSLGSGADAVSEG 88

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKAQKLHK-- 116
           E+              ++   K  +  +   +   +     ++ +L      +   +   
Sbjct: 89  EIRRAITAGISPNKIVFSGVGKTEQEISFALDNRILQLNVESIEELQLINKISYHKNIIA 148

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK---CKDKIESEIKNVN--GLMFHNNCEN-- 169
            + +RINP+++ +           ++ G           S + N+   G+  H   +   
Sbjct: 149 PVSIRINPNINANTNDKITTGLKVNKFGIPEESLDQVFNSSLTNIKIIGISVHIGSQIAN 208

Query: 170 -KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC----QRLKEFSEK 224
              F      +K I K F      I  + +GGG+    K+  +          LK   EK
Sbjct: 209 LGIFQNTIDKVKRIVKIFEQHNIHILRVDMGGGLGIPYKNSDIFPTIQEYTNLLKNNFEK 268

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES---AT 280
            S  I  EPG AIV NT  L   VL   S   KN +++D+ +   +   L   E      
Sbjct: 269 ESYNIICEPGRAIVGNTGILLAKVLYHKSNYEKNHLVLDTGMNDLIRPALYNAEHTIIPA 328

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
           +  +    +  + G  C + D F   ++   V   + ++   V  Y  +  + +N   + 
Sbjct: 329 VVSSKSHLSFDIVGPICESDDTFAYSYWINNVDNNEIVAICTVGAYGSSMSSNYNSRPLV 388

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + N D         +YND   
Sbjct: 389 PEVIVNQDNYHIIRHRQTYNDMLK 412


>gi|311087329|gb|ADP67409.1| diaminopimelate decarboxylase [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
          Length = 415

 Score =  188 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 60/394 (15%), Positives = 116/394 (29%), Gaps = 42/394 (10%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+++ D   +   ++            +  A K  +   +   +        + SL E+ 
Sbjct: 27  PFWVYDADIIYKKINLLRKFDV-----IRFAQKSCSNINILRLMKNKNVKIDAVSLGEIE 81

Query: 65  LGH-EKFGG--ETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGL 120
                 F        +     D E    ++     +   ++  L +    +      + L
Sbjct: 82  RALLSGFKPSTNEIIFTADILDKETLLKVAKYKIPVNAGSLDMLKQLGKIS--PGHHVWL 139

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKD----KIESEIKNVNGLMFHNNCENKSFLCFS 176
           RINP   Y      +     S+ G    +     I+     + GL  H            
Sbjct: 140 RINPRFGYGHSKKTNTGGENSKHGIWHPEQAIPIIKKYKLKLIGLHMHIGSGVNYLHLKK 199

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE----------KYS 226
                I+  F     +I  IS+GGG+    K        ++     +             
Sbjct: 200 VSQAMIKYAF-QLNQKISSISVGGGLPIPYKFNDQPIDIKKYFMLWDIARKKISKFLGEK 258

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285
           +++ +EPG  +V  +  L + V        KN V+VD      +   +            
Sbjct: 259 IELEIEPGRFLVAESGILISKVWATKKMGNKNFVLVDVGFNDLMRPTMYGSYHHISVIYG 318

Query: 286 GPYTAM--------VCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNINR 330
                         V G  C +GDIF        +      +K+GD + F D   Y    
Sbjct: 319 DDRKMNEKETIDTVVAGPLCESGDIFTQKEGGTVQTRKLPTIKVGDYLIFHDTGAYGAAM 378

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            + +N   +    +   + +I   R  +  +  N
Sbjct: 379 SSNYNTRPLIPEILLKNNDSIVIRRRQTIEEILN 412


>gi|238796567|ref|ZP_04640074.1| Diaminopimelate decarboxylase [Yersinia mollaretii ATCC 43969]
 gi|238719545|gb|EEQ11354.1| Diaminopimelate decarboxylase [Yersinia mollaretii ATCC 43969]
          Length = 420

 Score =  188 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 52/398 (13%), Positives = 115/398 (28%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +  D   +   ++   +        +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWAYDGDIIAQRINQLRHFDV-----IRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGH-EKF----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                 F          +     D      ++     +   ++  L++    A      +
Sbjct: 82  RALVAGFQPGQEPAEIVFTADLLDQATLLRVTELRIPVNAGSIDMLDQLGQHA--PGHPV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G   +D  ++          + G+  H       +
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYQDLPQAIEKIAQYGLTLVGIHMHIGSGVD-Y 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-------- 224
                +   + ++       I  IS GGG+    +    +   +                
Sbjct: 199 QHLEQVCDAMVEQVITLGQDISAISAGGGLSIPYQVGDDEIDTEHYYGLWNSARERIAAH 258

Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V + +EPG  +V  +  L   V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVSLEIEPGRFLVAESGVLIAQVRAVKEMGSRHYVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIFG-------EFHFEKPVKIGDRISFEDVAGY 326
                            +V G  C +GD+F        E       +IGD + F D   Y
Sbjct: 319 LLPADGRSLTAEPLIETVVGGPLCESGDVFTQEAGGGLETRALPAARIGDYLVFHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    +          R+ +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFEQGQPRLIRRKQTIEELIA 416


>gi|325568636|ref|ZP_08144929.1| diaminopimelate decarboxylase [Enterococcus casseliflavus ATCC
           12755]
 gi|325157674|gb|EGC69830.1| diaminopimelate decarboxylase [Enterococcus casseliflavus ATCC
           12755]
          Length = 438

 Score =  188 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 66/400 (16%), Positives = 123/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+    ++             + +  +   A K F    M   +          S 
Sbjct: 25  GTPLYVYSVSEIREECQKIQAQFLTRYSKTRAAYAAKAFCTTAMLQVIKSEGLSLDVVSG 84

Query: 61  YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK- 116
            E+       F  E   +N   K  +    A+      II + + ++   +   Q+    
Sbjct: 85  GELYTAIQADFPAEHIEFNGNNKSIEELAAALDYGVGRIIVDGIQEVGLIRALCQEKQVV 144

Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
            KI LRI P VS S        +  S+ G            ++ I++   +  GL FH  
Sbjct: 145 AKILLRITPEVSVSTHQFISTGQKDSKFGIPLDEEILFPLVEEVIQAPELDFYGLHFHVG 204

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWI----SLGGGI-----------HFTDKDYPV 211
            +        A +            + ++     ++GGG             ++    PV
Sbjct: 205 SQLSDNRSHLAAVDAALALVQTIHERFDYWIKELNVGGGFGVRYTDADIRQPYSYFLDPV 264

Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269
            +         +     I +EPG +IV        T+  I           +D  +  ++
Sbjct: 265 MEKIDAFYAQHQSERPTIVIEPGRSIVAEAGISLHTIGSIKTLPGIRTYASIDGGMTDNI 324

Query: 270 PDYLLYQESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       I  N           + G++C + DI  +     PV+ GD  +      
Sbjct: 325 RPGLYQATYTGILANRASEAATQKITISGKACESTDILVKDLALPPVETGDLFATFATGA 384

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  + +N + +P +          A++  SY     N
Sbjct: 385 YGYSMASSYNNLQIPAVVFVENGQAELAVKRQSYEQMLQN 424


>gi|319938690|ref|ZP_08013054.1| diaminopimelate decarboxylase [Streptococcus anginosus 1_2_62CV]
 gi|319811740|gb|EFW08006.1| diaminopimelate decarboxylase [Streptococcus anginosus 1_2_62CV]
          Length = 416

 Score =  188 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 56/392 (14%), Positives = 115/392 (29%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   +S  
Sbjct: 19  PTPFHLYDEKGIRATARALQKAFSWNQGFKEYFAVKATPNPTILKILKEEGCGVDCASYV 78

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++  +  F G     +       E+        TI  +    +   ++ A        
Sbjct: 79  ELLMSQKVGFSGNDMMLSSNDTPAKEMQFARELGATINLDAYEDVAFLQEVASIPEIISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES----EIKNVNGLMFH------NNCEN 169
                 V      + D     ++ G   +  I++    +   V     H          +
Sbjct: 139 RYNPGGVFELGTDIMDSP-EEAKFGMTKEQLIQAFKDLKNLGVKKFGIHALLASNTVTNH 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
                   + +   +        +++I+L GG+    +     +    + +   +   +I
Sbjct: 198 YYPELARQLFELAVEVVAETNVDLDFINLSGGVGVPYRPEEKANDILAIGQGVRRVYEEI 257

Query: 230 -----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                      + E G  ++     L T VL   +  +  + VD+S    +   +     
Sbjct: 258 LTPAGLGKVKIFTELGRFMLAPHGLLVTKVLHKKKTYRTYIGVDASAVNLLRPAMYGAYH 317

Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                +          V G  C   D F          IGD +   D   +  +    +N
Sbjct: 318 HITNMDYPDGPTEIVDVVGSLCENNDKFAIQRELPITNIGDTLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                   +   DG ++ IR      DY+  L
Sbjct: 378 AKLRSAEILLEEDGGVRMIRRAEIPEDYFATL 409


>gi|326800566|ref|YP_004318385.1| diaminopimelate decarboxylase [Sphingobacterium sp. 21]
 gi|326551330|gb|ADZ79715.1| diaminopimelate decarboxylase [Sphingobacterium sp. 21]
          Length = 392

 Score =  188 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 72/368 (19%), Positives = 126/368 (34%), Gaps = 34/368 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP++  D Q L   +D AL         +  ALK      +   + +   G    S  E
Sbjct: 14  ETPFFYYDLQLLQATIDNALTEADKYKFHIHYALKANFNERVLQIIQESGIGADCVSGNE 73

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKAQK--LHKK 117
           V+   E  F  +   +    K  +      + D       +V +L    D A+K     K
Sbjct: 74  VLKAVETGFSPDKIVFAGVGKADKEIIAALHHDIFAFNVESVQELCVIGDLAKKEGKVAK 133

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCEN- 169
           + LRINP+V              ++ G K  +           +   + GL FH   +  
Sbjct: 134 VALRINPNVDAKTHKYITTGLDENKFGIKTWELNECLDVIRNFDSLELIGLHFHVGSQVV 193

Query: 170 --KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEF 221
               F      +      F     +++ +++GGG+               K + +   +F
Sbjct: 194 DLNVFKSLCVKVNEFNNWFDERGYRLKVLNVGGGLGVNYTDPDGEPIVDFKRYFEIFDQF 253

Query: 222 SEKY-SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESA 279
            E+    +++ E G A+V  + +L + VL +   IK   ++ D+ +   +    LYQ   
Sbjct: 254 LERKGEQEVHFELGRALVAQSGSLISKVLYVKNGIKKHFLILDAGMTELMRPA-LYQAYH 312

Query: 280 TIYP----------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
            I              G     V G  C + D FG+       K GD I+      Y   
Sbjct: 313 KIEHLSAKQLSEETRDGSVNYDVVGPICESTDCFGKEVELPESKRGDLIAIRTTGAYGEV 372

Query: 330 RKNWFNGI 337
             + +N  
Sbjct: 373 MASKYNLR 380


>gi|257877302|ref|ZP_05656955.1| diaminopimelate decarboxylase [Enterococcus casseliflavus EC20]
 gi|257811468|gb|EEV40288.1| diaminopimelate decarboxylase [Enterococcus casseliflavus EC20]
          Length = 438

 Score =  188 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 66/400 (16%), Positives = 123/400 (30%), Gaps = 37/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+    ++             + +  +   A K F    M   +          S 
Sbjct: 25  GTPLYVYSVSEIREECQKIQAQFLTRYSKTRAAYAAKAFCTTAMLQVIKSEGLSLDVVSG 84

Query: 61  YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK- 116
            E+       F  E   +N   K  +    A+      II + + ++   +   Q+    
Sbjct: 85  GELYTAIQADFPAEHIEFNGNNKSIEELAAALDYGVGRIIVDGIQEVGLIRALCQEKQVV 144

Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNN 166
            KI LRI P VS S        +  S+ G            ++ I++   +  GL FH  
Sbjct: 145 AKILLRITPEVSVSTHQFISTGQKDSKFGIPLDEEILFPLVEEVIQAPELDFYGLHFHVG 204

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWI----SLGGGI-----------HFTDKDYPV 211
            +        A +            + ++     ++GGG             ++    PV
Sbjct: 205 SQLSDNRSHLAAVDAALALVQTIHERFDYWIKELNVGGGFGVRYTDADIRQPYSYFLDPV 264

Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269
            +         +     I +EPG +IV        T+  I           +D  +  ++
Sbjct: 265 MEKIDAFYAQHQSERPTIVIEPGRSIVAEAGISLHTIGSIKTLPGIRTYASIDGGMTDNI 324

Query: 270 PDYLLYQESATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       I  N           + G++C + DI  +     PV+ GD  +      
Sbjct: 325 RPGLYQATYTGILANRASEAATQKITISGKACESTDILVKDLALPPVETGDLFATFATGA 384

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y  +  + +N + +P +          A++  SY     N
Sbjct: 385 YGYSMASSYNNLQIPAVVFVENGQAELAVKRQSYEQMLQN 424


>gi|330011204|ref|ZP_08307023.1| diaminopimelate decarboxylase [Klebsiella sp. MS 92-3]
 gi|328534258|gb|EGF60876.1| diaminopimelate decarboxylase [Klebsiella sp. MS 92-3]
          Length = 420

 Score =  188 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 49/398 (12%), Positives = 116/398 (29%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAQLSQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        E   +     D      +      +   ++  L++  + +     ++
Sbjct: 82  RALAAGYDPQQNPEDIVFTADLIDDATLDRVKALQIPVNAGSIDMLSQLGEVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G          + +      + G+  H       +
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYSHLPAALEVMRRYQLQLVGIHMHIGSGVD-Y 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----------KDYPVKDFCQRLKEFS 222
                +   + ++   F   ++ IS GGG+                Y + +  +      
Sbjct: 199 GHLEQVCGAMVRQVVDFGQDLQAISAGGGLSIPYREGEEAIDTAHYYGLWNRAREQIAAH 258

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATI 281
             + V++ +EPG  +V  +  L + V  +     ++ V++D+     +   +        
Sbjct: 259 LGHPVKLEIEPGRFLVAESGVLVSQVRSVKEMGSRHFVLIDAGFNDLMRPAMYGSYHHIT 318

Query: 282 --------YPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                            +V G  C +GD+F        E         GD +   D   Y
Sbjct: 319 ALAGDGRDLSAAPQVETVVAGPLCESGDVFTQQEGGKVETRLLPAGAPGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    + +        R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFDGGKARLIRRRQTIQELLA 416


>gi|226307348|ref|YP_002767308.1| diaminopimelate decarboxylase [Rhodococcus erythropolis PR4]
 gi|226186465|dbj|BAH34569.1| probable diaminopimelate decarboxylase [Rhodococcus erythropolis
           PR4]
          Length = 447

 Score =  188 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 59/397 (14%), Positives = 114/397 (28%), Gaps = 37/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+  + +   T   I      +++ A K      M   ++    G    S  E
Sbjct: 50  GTPTYVVDEADVRHRCRTYREIF--PDSEIVYAGKALMIRAMATWVSDEGLGVDVCSAGE 107

Query: 63  VMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + +             +   K       AV +    I+ ++ S+  +         +K+ 
Sbjct: 108 LAVALAAGVDPHRIILHGNAKSVSELRAAVNAGVGRIVLDSPSEAVRLASVC-THRQKVL 166

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKC--KDK-------IESEIKNVNGLMFHNNCENK 170
           +R+ P +               + G     ++          +    + GL  H   +  
Sbjct: 167 IRVTPGIDIHGHKAVSTGILDQKFGLPAFSEELERTVSVVANAAHLQLIGLHCHLGSQIT 226

Query: 171 SFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY- 225
               F      M+  ++         +  + LGGG          +    RL    ++  
Sbjct: 227 DPELFRPAIETMIAQMDDIRRTHRIILTELDLGGGHGIAYMPGDAQLDLTRLAHVIDETL 286

Query: 226 ----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI------VDSSVEAHV 269
                       +I LEPG AI          V +I               +  +    +
Sbjct: 287 DDACTRNRFPRPEIVLEPGRAIAARAGVTLYRVQNIKSISGGRTFVSVDGGMSDNPRVSL 346

Query: 270 PDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFEDVAGYNI 328
            D     E    + +       V GR C +GD           +  GD ++      Y+ 
Sbjct: 347 YDSHYDVELVNRHSSAPLQEVTVAGRHCESGDEIAVGARLPADLHEGDLLAVPCTGAYHH 406

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           +  + +N +  P +           IR  S ND    
Sbjct: 407 SMASTYNSVGRPPVVAVLGGIARPLIRRESINDLLAR 443


>gi|194477239|ref|YP_002049418.1| diaminopimelate decarboxylase [Paulinella chromatophora]
 gi|171192246|gb|ACB43208.1| diaminopimelate decarboxylase [Paulinella chromatophora]
          Length = 453

 Score =  188 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 53/395 (13%), Positives = 109/395 (27%), Gaps = 34/395 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP Y++D+  L           K         L A K  ++  +   + +   G    S
Sbjct: 46  GTPLYILDEITLRATCKAYFNALKKFYSALSLPLYASKANSSKLLTALVAEEGFGIDVVS 105

Query: 60  LYEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKA--QKLH 115
             E++              +   K  +  A+  +   TI+ +    L    +    +KL 
Sbjct: 106 GGELLTALAGKMPASRILLHGNNKSWQELALALDHGATIVVDNSHDLQIISELVGNRKLP 165

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168
             + LR  P++           +  S+ G   +         +      + GL  H   +
Sbjct: 166 VSLMLRFTPNIECHTHEYIRTGKLDSKFGFGPEQIESIFKKLLACSWARITGLHAHIGSQ 225

Query: 169 NKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK- 224
                    ++  +             I  +++GGG+             Q   +   K 
Sbjct: 226 IFELEPHRDLVGIMADAIQLGRSMGHPIVDLNVGGGLGICYVSSDDPPSIQNWVKNIAKA 285

Query: 225 ----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDY 272
                        ++  EPG ++V        T+              +D  +  +    
Sbjct: 286 VTVSCERRKLSLPRLICEPGRSVVATAGVTLYTLGSQKHIPGMPSYLSIDGGMSDNPRPI 345

Query: 273 LLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
                     A           ++ G+ C +GD+  +  +    K GD +       YNI
Sbjct: 346 TYQSIYTAFLADYPTQKVIQEVILVGKHCESGDVLLKNLYLPKSKSGDILVVFATGAYNI 405

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
           +  + +N +  P   +                D  
Sbjct: 406 SMSSNYNRVPRPASVIVFNGHADLIQLREQPEDLL 440


>gi|317049365|ref|YP_004117013.1| diaminopimelate decarboxylase [Pantoea sp. At-9b]
 gi|316950982|gb|ADU70457.1| diaminopimelate decarboxylase [Pantoea sp. At-9b]
          Length = 417

 Score =  188 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 59/396 (14%), Positives = 117/396 (29%), Gaps = 44/396 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P++  D   +   +             +  A K  +   +   +        S SL E+ 
Sbjct: 27  PFWAYDASVIQQRIAQLNQFDV-----VRFAQKACSNIHILRLMRAAGVKVDSVSLGEIE 81

Query: 65  LGHEKF---GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-AQKLHKKIGL 120
                    GGE   +     D    A ++     +      ++      A      + L
Sbjct: 82  RALAAGYQPGGEDIVFTADVLDQPTLARIAQ--LKVPVNAGSVDMLHQLGAVSAGHAVWL 139

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174
           RINP   +      +     S+ G    D       I+     + GL  H       +  
Sbjct: 140 RINPGFGHGHSQKTNTGGENSKHGIWHSDLPQALAAIQQHGLRLVGLHMHIGSGVD-YGH 198

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE-K 224
              +   +  +   F   +E IS GGG+               Y       R +  +   
Sbjct: 199 LQQVCDAMVDQVVSFGQDLEAISAGGGLSIPYRVGEEAIDTDHYYGLWNGARERIAAHLG 258

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
           ++V++ +EPG  +V  +  L + V  +     ++ V+VD+     +   +          
Sbjct: 259 HAVKLEIEPGRFLVAESGVLVSQVRAVKEMGSRHFVLVDAGFSDLMRPAMYGSYHHISLL 318

Query: 284 NTGPYTAM--------VCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNI 328
                T          + G  C +GD+F        E       ++GD + F D   Y  
Sbjct: 319 PADGRTVNASQTVESVIAGPLCESGDVFTQLEGGKVETRALPAAQVGDYLVFHDTGAYGA 378

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +  + +N   +    +       +  R  +  +   
Sbjct: 379 SMSSNYNSRPLIPEVLFENGTAREIRRAQTIQELLA 414


>gi|162148745|ref|YP_001603206.1| diaminopimelate decarboxylase [Gluconacetobacter diazotrophicus PAl
           5]
 gi|161787322|emb|CAP56916.1| putative diaminopimelate decarboxylase [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 491

 Score =  188 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 49/387 (12%), Positives = 109/387 (28%), Gaps = 28/387 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           + TP +++    L           ++AG    +  A+K      +   L     G    S
Sbjct: 86  VGTPTWVMGAGTLRARYRRLAGALRDAGLAPSIHFAVKANDHLAVLRVLAAEGAGADVVS 145

Query: 60  LYEVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
             E+              ++     +D    AV      I   +  +L+   D A    +
Sbjct: 146 GGELRRARAAGIPAAGIVFSGVGKSRDELHLAVTEGIAHIAVESAEELDVVSDVAVAAGR 205

Query: 117 KIG--LRINPSVSYSKFILADPNRPFSRLGEK-----CKDKIESEIKNVNGLMFHNNCEN 169
                LR+NP V              ++ G             + +  ++ L F  +  +
Sbjct: 206 TARITLRVNPDVDAGTHEKITTGLSTNKFGIAYARAADLYARAAALPGLHPLGFSVHIGS 265

Query: 170 KSFLCFSAMLKNIE-----KEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEF 221
           +                  +        +  +  GGG+    +D            ++  
Sbjct: 266 QIVAMGPYRAAFARVADLVRAVRARGLSVGLVDCGGGLGIRYRDEVEGAPMALAGAIRAE 325

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDI---SENIKNLVIVDSSVEAHVPDYLLYQES 278
                V++ +EPG  +      L + V+      + +   +I+D+++       L     
Sbjct: 326 LGDLDVRLAIEPGRWLAGPAGVLLSRVILRKAGQDGLPPFLILDAAMNDLARPSLYDSWH 385

Query: 279 ATIYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
             +  +         +  V G  C + D F        +  G  ++  D   Y +   + 
Sbjct: 386 GILPLSARDAVQPVESVNVVGPVCESADSFATGRMLPRMGDGAAVALLDTGAYGMVMSST 445

Query: 334 FNGINMPTIAVKNVDGTIKAIREFSYN 360
           +NG  +    + +              
Sbjct: 446 YNGRPLAAQVLVDGGRWSVIRARQPVE 472


>gi|62181522|ref|YP_217939.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|224584802|ref|YP_002638600.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|62129155|gb|AAX66858.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|224469329|gb|ACN47159.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|322716004|gb|EFZ07575.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
          Length = 420

 Score =  188 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 56/398 (14%), Positives = 113/398 (28%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D   +   +             +  A K  +   +   +        S SL E+ 
Sbjct: 27  PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRAQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D    A +S     +   +V  L +    +     ++
Sbjct: 82  RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G    D   +          + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAIMQKYRLKLVGIHMHIGSGVDYG 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223
                    + +        +E IS GGG+    +          Y       R +    
Sbjct: 200 HLEQVCGAMVRQVL-ECGQDVEAISAGGGLSIPYREGEEPVDTRHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             ++V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHAVKLEIEPGRFLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     N      +V G  C +GD+F        E      V  GD +   D   Y
Sbjct: 319 ALAADGRALENGPWVETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    + +        R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 416


>gi|322375830|ref|ZP_08050341.1| protein TabA [Streptococcus sp. C300]
 gi|321279098|gb|EFX56140.1| protein TabA [Streptococcus sp. C300]
          Length = 418

 Score =  188 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 60/392 (15%), Positives = 116/392 (29%), Gaps = 29/392 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   SS  
Sbjct: 19  PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78

Query: 62  EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++ H+  F G    ++     D E         TI  +    +   +  A        
Sbjct: 79  ELLMSHKLDFPGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERAAGIPEIISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169
                 V      + D     ++ G       E+         +   ++  L  +     
Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                   + +   +        +++I+L GGI    +     +    + E   K   + 
Sbjct: 198 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEPNDIAVIGEGVRKVYEEV 257

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     I+ E G  ++     L T V    +  +  + VD+S    +   +     
Sbjct: 258 LTPAGLGQVKIFTELGRFMLAPHGALVTRVTHKKKTYRTYLGVDASAVNLMRPAMYGAYH 317

Query: 279 ATI---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                 +P+       V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HITNLTHPDEPVEVVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
                   +   +G  + IR      DY+  L
Sbjct: 378 AKLRSAEILYTEEGKARQIRRAERPEDYFATL 409


>gi|58617276|ref|YP_196475.1| diaminopimelate decarboxylase [Ehrlichia ruminantium str. Gardel]
 gi|58416888|emb|CAI28001.1| Diaminopimelate decarboxylase [Ehrlichia ruminantium str. Gardel]
          Length = 424

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 70/384 (18%), Positives = 129/384 (33%), Gaps = 22/384 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y      + NN         N    +  A+K  +   +   L+    G  + S  
Sbjct: 34  IGTPVYCYSLNAIKNNYIQFKENLPN-NSIICYAVKSNSNLSILSLLSSLGSGADAVSEG 92

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKAQKLHK-- 116
           E+              ++   K  +  +   +   +     ++ +L      +   +   
Sbjct: 93  EIRRAITAGISPNKIVFSGVGKTEQEISFALDNRILQLNVESIEELQLINKISYHKNIIA 152

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK---CKDKIESEIKNVN--GLMFHNNCEN-- 169
            + +RINP+++ +           ++ G           S + N+   G+  H   +   
Sbjct: 153 PVSIRINPNINANTNDKITTGLKVNKFGIPEESLDQVFNSSLTNIKIIGISVHIGSQIAN 212

Query: 170 -KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC----QRLKEFSEK 224
              F      +K I K F      I  + +GGG+    K+  +          LK   EK
Sbjct: 213 LGIFQNTIDKVKRIVKIFEQHNIHILRVDMGGGLGIPYKNSDIFPTIQEYTNLLKNNFEK 272

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES---AT 280
            S  I  EPG AIV NT  L   VL   S   KN +++D+ +   +   L   E      
Sbjct: 273 ESYNIICEPGRAIVGNTGILLAKVLYHKSNYEKNHLVLDTGMNDLIRPALYNAEHTIIPA 332

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
           +  +    +  + G  C + D F   ++   V   + ++   V  Y  +  + +N   + 
Sbjct: 333 VVSSKSHLSFDIVGPICESDDTFAHSYWINNVDNNEIVAICTVGAYGSSMSSNYNSRPLV 392

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + N D         +YND   
Sbjct: 393 PEVIVNKDNYHIIRHRQTYNDMLK 416


>gi|261822862|ref|YP_003260968.1| diaminopimelate decarboxylase [Pectobacterium wasabiae WPP163]
 gi|261606875|gb|ACX89361.1| diaminopimelate decarboxylase [Pectobacterium wasabiae WPP163]
          Length = 420

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 59/392 (15%), Positives = 120/392 (30%), Gaps = 46/392 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +  D Q ++N +             +  A K  +   +   + ++     S SL E+ 
Sbjct: 27  PVWAYDAQTIVNRIAQLRQFD-----TIRFAQKACSNTHILRLMREHGVKVDSVSLGEIE 81

Query: 65  LGH-EKF----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                 F          +     D      ++  +  +   +V  L +     Q     +
Sbjct: 82  RALVAGFVPGTDAHEIVFTADLLDRPTLQRVAELNIPVNAGSVDMLEQLGQ--QSPGHPV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G    D       I+     + G+  H       +
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYGDLPLALEHIQRYQLKLVGIHMHIGSGVD-Y 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                + + + ++       IE IS GGG+             + Y       R K  + 
Sbjct: 199 GHLEQVCEAMVRQVVELGQDIEAISAGGGLSIPYRHGEEAIDTEHYYGLWNAAREKIAAH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V + +EPG  +V  +  L   V  I     ++ V+VD+     +   +        
Sbjct: 259 LGHPVTLEIEPGRFLVAESGVLVAEVRAIKSMGSRHFVLVDAGFNDLMRPAMYGSYHHVS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                      +    +++ G  C +GD+F        E       ++GD + F D   Y
Sbjct: 319 LLSGDGRDISQSTLRDSVIAGPLCESGDVFTQQAGGGVETFPLPEAQVGDYLVFHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFS 358
             +  + +N   +    +          R  +
Sbjct: 379 GASMSSNYNSRPLLPEVLFENGEPRLIRRRQT 410


>gi|238787278|ref|ZP_04631077.1| Diaminopimelate decarboxylase [Yersinia frederiksenii ATCC 33641]
 gi|238724540|gb|EEQ16181.1| Diaminopimelate decarboxylase [Yersinia frederiksenii ATCC 33641]
          Length = 420

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 53/398 (13%), Positives = 112/398 (28%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +  D   +   ++            +  A K  +   +   +        S SL E+ 
Sbjct: 27  PVWAYDGDIITQKINQLRSFDV-----IRFAQKACSNIHILGLMRNQGVKVDSVSLGEIE 81

Query: 65  LGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
              +             +     D      ++     +   ++  L +    A      +
Sbjct: 82  RALQAGFQPGQEPAEIVFTADLLDQATLLRVTELHIPVNAGSIDMLEQLGQHA--PGHPV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G   +D       IE     + G+  H       +
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHEDLPLAIKKIEQYGLTLVGIHMHIGSGVD-Y 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-------- 224
                +   + ++       I  IS GGG+    +    +   +                
Sbjct: 199 QHLEQVCDAMVQQVIDLGQDISAISAGGGLSIPYQFGDDEIDTEHYYGLWNSARERIAAH 258

Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V + +EPG  ++  +  L   V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVSLEIEPGRFLMAESGVLIAQVRAVKDMGRRHYVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIFG-------EFHFEKPVKIGDRISFEDVAGY 326
                     +      +V G  C +GD+F        E       KIGD + F D   Y
Sbjct: 319 LLPADGRSLADEPLIETVVAGPLCESGDVFTQEAGGGLETRALPMAKIGDYLVFHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    +          R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFEQGQPRLIRRRQTIEELIA 416


>gi|222081791|ref|YP_002541156.1| diaminopimelate decarboxylase [Agrobacterium radiobacter K84]
 gi|221726470|gb|ACM29559.1| diaminopimelate decarboxylase protein [Agrobacterium radiobacter
           K84]
          Length = 414

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 55/396 (13%), Positives = 119/396 (30%), Gaps = 48/396 (12%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D + +   +             +  A K  +   +   + +      + SL E
Sbjct: 17  GTPLWVYDAEAIRRRIKQL-SAFDV----IRFAQKACSNIHILREMRKAGVFVDAVSLGE 71

Query: 63  VMLG-HEKF------GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKL 114
           +       +            +     D  I   +      +   ++  L++  +++   
Sbjct: 72  IERAVRAGYAVGSTSDAAEIVFTADVFDRAILDRVVADRIEVNIGSIDMLHQLGERS--P 129

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCE 168
             ++ LR+NP   +      +     S+ G   +        + +    + GL  H    
Sbjct: 130 GHRVWLRVNPGFGHGHSNKTNTGGENSKHGIWFEQLHEAVSAVRAHSLTLVGLHMHIGSG 189

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK----------DYPVKDFCQRL 218
              +     +   +        T IE IS GGG+    K           + + D  +R 
Sbjct: 190 VD-YGHLQRVCGAMVDFCRDLGTDIEAISAGGGLSVPYKEGEEEIDPTHYFSLWDEARRQ 248

Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQE 277
            E   ++ V++ +EPG  +  ++  L   V  +         +VD+         +    
Sbjct: 249 VEAHVQHPVRLEIEPGRFLTADSGVLLAEVRAVKTMGQNRFTLVDAGFSDLARPAMYGSY 308

Query: 278 SAT-IYPNTGPY-------TAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFED 322
               + P   P+         +V G  C +GD+F        E        +GD + F  
Sbjct: 309 HHISVIPGPAPHDRSAVTLPTVVAGPLCESGDVFTQTEFGTVEKRDLPETHVGDFLVFHG 368

Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFS 358
              Y     + +N        + +        R  +
Sbjct: 369 TGAYGATMSSNYNSRLYAPEVLLDEGKHRLIRRRQT 404


>gi|225156512|ref|ZP_03724846.1| diaminopimelate decarboxylase [Opitutaceae bacterium TAV2]
 gi|224802840|gb|EEG21088.1| diaminopimelate decarboxylase [Opitutaceae bacterium TAV2]
          Length = 499

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 52/424 (12%), Positives = 106/424 (25%), Gaps = 60/424 (14%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           +  TP Y+     + +N            +++  A+K  ++  +              S 
Sbjct: 67  LYGTPTYVYSAATMTDNYTRLARSLGGLDLQICYAMKANSSLAILRHFANLGAAFDLVSG 126

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIF--NTVSQLNKFKDKAQKL--- 114
            E+          +   +    K      +        F   +  ++ +    A KL   
Sbjct: 127 GEIRRVLAAGADVKRSVFAGVGKTEAEIKLALENGIFAFHVESEPEIARINHVAGKLLSS 186

Query: 115 -----HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLM 162
                   I +RINP V           +  ++ G   K    +           + G+ 
Sbjct: 187 GRITGKAPIAIRINPDVDAHTHAKITTGKADNKFGIPLKHAAAAYETAARYPHIEIKGVQ 246

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
            H   +  S   F   +  +        T+        G               +    +
Sbjct: 247 MHIGSQLTSVKPFVEAVAKVAPFVADLKTRYGITYFSIGGGIGIIYKDALASGAKAWWDA 306

Query: 223 EKYSVQI---------------------------------YLEPGEAIVTNTTTLNTTVL 249
           +    +                                   LEPG  +V N   L T V 
Sbjct: 307 QPADQRPLTPEAYGAALTPLLQPLASATGGGGGTGTGLKILLEPGRFLVGNAGVLLTRVE 366

Query: 250 DISENIKN-----LVIVDSSVEAHVPDYLLYQESATIYPNTGPYT----AMVCGRSCLAG 300
            +            ++VD+++   V   +       +            A V G  C +G
Sbjct: 367 YLKRGHDRARDKSFLVVDAAMNDLVRPAMYDSYHEILPLQRDTARPALVADVVGPICESG 426

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           D F +    + +  G+ ++F     Y       +N   M    + N           ++ 
Sbjct: 427 DCFAKDRSLQELGEGEHLAFMSAGAYGYTMAGRYNSRPMAAEVLVNQGTFELINARETFE 486

Query: 361 DYYN 364
               
Sbjct: 487 QQIA 490


>gi|282877924|ref|ZP_06286733.1| diaminopimelate decarboxylase [Prevotella buccalis ATCC 35310]
 gi|281299925|gb|EFA92285.1| diaminopimelate decarboxylase [Prevotella buccalis ATCC 35310]
          Length = 385

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 63/368 (17%), Positives = 126/368 (34%), Gaps = 26/368 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTAL-YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +TP+Y  D   L   L      I +    ++  A+K  A   + + ++Q        S  
Sbjct: 14  QTPFYYYDTALLKETLQAIKTEIEQYERFQVHYAVKANANAKLLNIISQAGLEADCVSGG 73

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118
           E++      F      Y    K     A+  + +       ++++L    + A+K  K  
Sbjct: 74  EILAAIDAGFSPNKIVYAGVGKSDWEIALGIDQEILCFNVESIAELEVINEIAEKKGKIA 133

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV-------NGLMFHNNCEN 169
              LRINP V              ++ G    +   +    +        GL FH   + 
Sbjct: 134 RIALRINPDVEAHTHANITTGLAENKFGIALCEMKTALEACLRMKNVRFTGLHFHIGSQI 193

Query: 170 ---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD------FCQRLKE 220
              + F+     +  +++E       +E I++GGG+    +    +       + Q   +
Sbjct: 194 LDMRDFVSLCDRINQLQEELHQHHVHVESINVGGGLGVNYEHPDQQPIPDFKAYFQTYAQ 253

Query: 221 FSEKYSVQI-YLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQES 278
             + Y  Q  + E G +IV    +L T VL + + ++    + D+ +   +   L     
Sbjct: 254 HLKLYPHQTLHFELGRSIVAQCGSLITKVLYVKQGVRKKFCIVDAGMTDFIRPALYQSRH 313

Query: 279 --ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
               +  N    T  V G  C + D+F +          D ++      Y     + +N 
Sbjct: 314 QIENLSSNDAHETYDVVGPICESSDVFAKAIDLNQCHRCDLLAIRSAGAYGEVMASQYNC 373

Query: 337 INMPTIAV 344
             +P   +
Sbjct: 374 RKLPKGYL 381


>gi|229494021|ref|ZP_04387790.1| diaminopimelate decarboxylase [Rhodococcus erythropolis SK121]
 gi|229319090|gb|EEN84942.1| diaminopimelate decarboxylase [Rhodococcus erythropolis SK121]
          Length = 447

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 59/397 (14%), Positives = 114/397 (28%), Gaps = 37/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+  + +   T   I      +++ A K      M   ++    G    S  E
Sbjct: 50  GTPTYVVDEADVRHRCRTYREIF--PDSEIVYAGKALMIRAMATWVSDEGLGVDVCSAGE 107

Query: 63  VMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + +             +   K       AV +    I+ ++ S+  +         +K+ 
Sbjct: 108 LAVALAAGVDPNRIILHGNAKSVAELRAAVNAGVGRIVLDSPSEAVRLASVC-THRQKVL 166

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKC--KDKIE-------SEIKNVNGLMFHNNCENK 170
           +R+ P +               + G     ++          +    + GL  H   +  
Sbjct: 167 VRVTPGIDIHGHKAVSTGIVDQKFGLPAFSEELEHTVSVVANATHLQLIGLHCHLGSQIT 226

Query: 171 SFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY- 225
               F      M+  ++         +  + LGGG          +    RL    ++  
Sbjct: 227 DPELFRPAIETMIAQMDDIRRTHRIILTELDLGGGHGIAYVPGDAQLDLTRLAHVIDETL 286

Query: 226 ----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI------VDSSVEAHV 269
                       +I LEPG AI          V +I               +  +    +
Sbjct: 287 DDACTRNRFPRPEIVLEPGRAIAARAGVTLYRVQNIKSISGGRTFVSVDGGMSDNPRVSL 346

Query: 270 PDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFEDVAGYNI 328
            D     E    + +       V GR C +GD           +  GD ++      Y+ 
Sbjct: 347 YDSHYDVELVNRHSSAPLQEVTVAGRHCESGDEIAVGARLPADLHEGDLLAVPCTGAYHH 406

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           +  + +N +  P +           IR  S ND    
Sbjct: 407 SMASTYNSVGRPPVVAVLGGIARPLIRRESINDLLAR 443


>gi|22127060|ref|NP_670483.1| diaminopimelate decarboxylase [Yersinia pestis KIM 10]
 gi|45442627|ref|NP_994166.1| diaminopimelate decarboxylase [Yersinia pestis biovar Microtus str.
           91001]
 gi|108806470|ref|YP_650386.1| diaminopimelate decarboxylase [Yersinia pestis Antiqua]
 gi|108813160|ref|YP_648927.1| diaminopimelate decarboxylase [Yersinia pestis Nepal516]
 gi|145598995|ref|YP_001163071.1| diaminopimelate decarboxylase [Yersinia pestis Pestoides F]
 gi|150260186|ref|ZP_01916914.1| diaminopimelate decarboxylase [Yersinia pestis CA88-4125]
 gi|153949493|ref|YP_001399956.1| diaminopimelate decarboxylase [Yersinia pseudotuberculosis IP
           31758]
 gi|162418960|ref|YP_001607600.1| diaminopimelate decarboxylase [Yersinia pestis Angola]
 gi|165925080|ref|ZP_02220912.1| diaminopimelate decarboxylase [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165937375|ref|ZP_02225939.1| diaminopimelate decarboxylase [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|166010227|ref|ZP_02231125.1| diaminopimelate decarboxylase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166212689|ref|ZP_02238724.1| diaminopimelate decarboxylase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167400100|ref|ZP_02305618.1| diaminopimelate decarboxylase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167419377|ref|ZP_02311130.1| diaminopimelate decarboxylase [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167425309|ref|ZP_02317062.1| diaminopimelate decarboxylase [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|167466654|ref|ZP_02331358.1| diaminopimelate decarboxylase [Yersinia pestis FV-1]
 gi|218927976|ref|YP_002345851.1| diaminopimelate decarboxylase [Yersinia pestis CO92]
 gi|229837708|ref|ZP_04457868.1| diaminopimelate decarboxylase, PLP-binding [Yersinia pestis
           Pestoides A]
 gi|229840698|ref|ZP_04460857.1| diaminopimelate decarboxylase, PLP-binding [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229842746|ref|ZP_04462900.1| diaminopimelate decarboxylase, PLP-binding [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229903606|ref|ZP_04518719.1| diaminopimelate decarboxylase, PLP-binding [Yersinia pestis
           Nepal516]
 gi|270487386|ref|ZP_06204460.1| diaminopimelate decarboxylase [Yersinia pestis KIM D27]
 gi|294503019|ref|YP_003567081.1| diaminopimelate decarboxylase [Yersinia pestis Z176003]
 gi|21960112|gb|AAM86734.1|AE013919_7 diaminopimelate decarboxylase [Yersinia pestis KIM 10]
 gi|45437492|gb|AAS63043.1| diaminopimelate decarboxylase [Yersinia pestis biovar Microtus str.
           91001]
 gi|108776808|gb|ABG19327.1| diaminopimelate decarboxylase [Yersinia pestis Nepal516]
 gi|108778383|gb|ABG12441.1| diaminopimelate decarboxylase [Yersinia pestis Antiqua]
 gi|115346587|emb|CAL19468.1| diaminopimelate decarboxylase [Yersinia pestis CO92]
 gi|145210691|gb|ABP40098.1| diaminopimelate decarboxylase [Yersinia pestis Pestoides F]
 gi|149289594|gb|EDM39671.1| diaminopimelate decarboxylase [Yersinia pestis CA88-4125]
 gi|152960988|gb|ABS48449.1| diaminopimelate decarboxylase [Yersinia pseudotuberculosis IP
           31758]
 gi|162351775|gb|ABX85723.1| diaminopimelate decarboxylase [Yersinia pestis Angola]
 gi|165914849|gb|EDR33462.1| diaminopimelate decarboxylase [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165923280|gb|EDR40431.1| diaminopimelate decarboxylase [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165990713|gb|EDR43014.1| diaminopimelate decarboxylase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166205981|gb|EDR50461.1| diaminopimelate decarboxylase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166963371|gb|EDR59392.1| diaminopimelate decarboxylase [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167050808|gb|EDR62216.1| diaminopimelate decarboxylase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167055709|gb|EDR65493.1| diaminopimelate decarboxylase [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|229679376|gb|EEO75479.1| diaminopimelate decarboxylase, PLP-binding [Yersinia pestis
           Nepal516]
 gi|229690226|gb|EEO82281.1| diaminopimelate decarboxylase, PLP-binding [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229697064|gb|EEO87111.1| diaminopimelate decarboxylase, PLP-binding [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229704085|gb|EEO91097.1| diaminopimelate decarboxylase, PLP-binding [Yersinia pestis
           Pestoides A]
 gi|262361055|gb|ACY57776.1| diaminopimelate decarboxylase [Yersinia pestis D106004]
 gi|262364999|gb|ACY61556.1| diaminopimelate decarboxylase [Yersinia pestis D182038]
 gi|270335890|gb|EFA46667.1| diaminopimelate decarboxylase [Yersinia pestis KIM D27]
 gi|294353478|gb|ADE63819.1| diaminopimelate decarboxylase [Yersinia pestis Z176003]
 gi|320014133|gb|ADV97704.1| diaminopimelate decarboxylase [Yersinia pestis biovar Medievalis
           str. Harbin 35]
          Length = 420

 Score =  187 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 52/398 (13%), Positives = 114/398 (28%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +  D   +   ++   +        +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWAYDGDIIAERINQLRHFDV-----IRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                            +     D      ++  +  +   ++  L++   +A      +
Sbjct: 82  RALHAGYQPGQEPAEIVFTADLLDQATLLRVTELNIPVNAGSIDMLDQLGQQA--PGHPV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G   ++       IE     + G+  H       +
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHEELPRALKKIEHYGLTLVGIHMHIGSGVD-Y 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-------- 224
                +   + ++       I  IS GGG+    +        +                
Sbjct: 199 QHLEQVCDAMVQQVITLGHDISAISAGGGLSIPYQFGDDVIDTEHYYGLWNSARERIAAH 258

Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATI 281
             + V + +EPG  +V  +  L   V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVSLEIEPGRFLVAESGVLIAQVRAVKDMGRRHYVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 282 YPNTGPYT--------AMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                            +V G  C +GD+F        E        IGD + F D   Y
Sbjct: 319 LLPADGRDLTSAPLIDTVVAGPLCESGDVFTQQEGGGVETLALPAAVIGDYLVFHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    +          R  +  +  +
Sbjct: 379 GASMSSNYNSRPLLPEVLFEKGQPRLIRRRQTIEELID 416


>gi|168261830|ref|ZP_02683803.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|205349003|gb|EDZ35634.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
          Length = 420

 Score =  187 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 55/398 (13%), Positives = 113/398 (28%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D   +   +             +  A K  +   +   +        S SL E+ 
Sbjct: 27  PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRALGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D    A +S     +   +V  L +    +     ++
Sbjct: 82  RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G    D   +          + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAVMQKYRLKLVGIHMHIGSGVDYG 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223
                    + +        ++ IS GGG+    +          Y       R +    
Sbjct: 200 HLEQVCGAMVRQVL-ECGQDLDAISAGGGLSIPYREGEEPVDTRHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES--- 278
             ++V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHAVKLEIEPGRFLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHRIS 318

Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     N      +V G  C +GD+F        E      V  GD +   D   Y
Sbjct: 319 ALAADGRALENGPWVETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    + +        R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 416


>gi|229828510|ref|ZP_04454579.1| hypothetical protein GCWU000342_00573 [Shuttleworthia satelles DSM
           14600]
 gi|229793104|gb|EEP29218.1| hypothetical protein GCWU000342_00573 [Shuttleworthia satelles DSM
           14600]
          Length = 427

 Score =  187 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 64/391 (16%), Positives = 119/391 (30%), Gaps = 29/391 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+++ D++ +             N G +   A+K      +   L +Y  GT  SSL 
Sbjct: 20  PTPFHVYDEKGIRQKARDVREAFAWNPGFREYFAVKATPNPFLIKILQEYGCGTDCSSLS 79

Query: 62  EVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+ML       G    +        E          I F+ +S ++ ++ +   L   + 
Sbjct: 80  ELMLSDAIGLKGHEIMFTSNDTPAEEFRYAAQIGAIINFDDISHIDFYEREVGPLPDTVC 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFH------NNCEN 169
            R NP   Y        N   S+ G      IE+      K V     H          +
Sbjct: 140 CRYNPGGIYELANGIMDNPGDSKYGMTHAQIIEAYRILKEKRVKHFGIHAFLCSNTVTND 199

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                   +   + +       + ++I+L GG+          +    + +   +   + 
Sbjct: 200 YYPTLARTLFTLVAEISKELGIRFDFINLSGGVGIPYSPDQTPNDIMAIGQGVHRVYDEV 259

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     IY E G  ++     L T  +      KN + VD+     +   +     
Sbjct: 260 LVPAGMDQIAIYTEMGRFMMGPHGGLVTRAIHAKHTYKNYIGVDACAANLMRPAMYGAYH 319

Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                            V G  C   D F        ++ GD +   D   +  +    +
Sbjct: 320 HITVLGKEDAPLTEVYDVTGALCENNDKFAIDRKLPAIENGDLLFIHDTGAHGFSMGYNY 379

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           N     +  +   DG+ + IR   +  DY+ 
Sbjct: 380 NARLWSSEILLKEDGSFELIRRAQTPRDYFA 410


>gi|332295006|ref|YP_004436929.1| diaminopimelate decarboxylase [Thermodesulfobium narugense DSM
           14796]
 gi|332178109|gb|AEE13798.1| diaminopimelate decarboxylase [Thermodesulfobium narugense DSM
           14796]
          Length = 427

 Score =  187 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 58/394 (14%), Positives = 127/394 (32%), Gaps = 33/394 (8%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKN---AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           TP Y++  Q + + +++     K       ++  A K     G    L +        S 
Sbjct: 31  TPLYIMCAQTVKSRVESFKESFKKYLPFESRIAFAGKSLCVTGFLKKLKELDMWLDVVSG 90

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  +   ++   K  E       SN   I+ +  S++ K ++ ++K    
Sbjct: 91  GELYTAIKAGFDTKRIYFHGNNKSFEELEFAIRSNVGYIVVDGFSEIEKIRELSKKYSYI 150

Query: 118 IG-LRINPSVSYSKFILADPNRPFSRLGEKC--------KDKIESEIKNVNGLMFHNNCE 168
              +R++P +           +  S+ G           K+    +  +  G+  H   +
Sbjct: 151 PCMIRVSPGIEAHTHEFIKTGKIDSKFGFPIGEDAIKAVKELSLIDSVSFKGIHAHIGSQ 210

Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR-------- 217
                 ++    ++ +   +       +E I+ GGG              +         
Sbjct: 211 IFDSNPYIELVNVMFDFANKLSDEGFSLENINFGGGFGIVYTKEDHPLSIEEFIKDISFE 270

Query: 218 LKEFSEKYSVQIY---LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDY 272
           + +  +KY+++     +EPG +I   +      V  I +    L  V     +  +    
Sbjct: 271 INKNMKKYNMKDISFTVEPGRSIAGPSGITVYRVGSIKKIEGFLPYVAVDGGMADNPRYA 330

Query: 273 LLYQESATIYPNTGP--YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
           L   +                + GR C +GD+  E      +  GD +       YN + 
Sbjct: 331 LYRAKYHAELDEKTEAFQEVKIVGRFCESGDMLIERIMLPEISTGDLLIVFATGAYNYSM 390

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            + +N    P + +         +R  +Y+D  +
Sbjct: 391 ASNYNRFGRPAMVMVEDGKDTLLVRRETYDDIVS 424


>gi|257077100|ref|ZP_05571461.1| diaminopimelate decarboxylase [Ferroplasma acidarmanus fer1]
          Length = 421

 Score =  187 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 58/385 (15%), Positives = 114/385 (29%), Gaps = 30/385 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP  + +  ++  N+           +K+  A+K      +   + +   G  +++  E
Sbjct: 31  GTPVIVYNMARVRENIRRIRDAFNGINIKVHFAVKSNYNPYIVSQIIKEGTGIDAANYNE 90

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGL 120
           V L      G                  +      I F+   Q+   K     L + +  
Sbjct: 91  VKLAIMCGLGSRDIIATPNNLSGTELRTIKEEGVAINFDHEGQMGLLKG---SLPETVSF 147

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSFLC 174
           RINP +   +F          + G    D I +    +       G+             
Sbjct: 148 RINPGIGKGEFPGITTGGKNVKFGISVDDAISAYSAAIKAGVKHFGIHMMTGSNVLEPEF 207

Query: 175 FSA----MLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE--- 223
           F+       K  E          ++I +GGG             +      + +      
Sbjct: 208 FNESSGLFFKIAETISDRTGIDFDFIDIGGGFGVPYTSDEHALDIGKTAGYISDNFRASN 267

Query: 224 ----KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA 279
                   ++ +EPG  IV ++  L + V  I  + + L+ +D+S+   +   L      
Sbjct: 268 NRGYFKDSRLIIEPGRYIVADSAILLSKVTSIKHSDRELIGIDASMNTLIRIPLYGARHG 327

Query: 280 TIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
            +    G  T      + G+ C   D   +        +GD +   D   Y  +  + +N
Sbjct: 328 ILLSGHGENTSSSRFDIVGQVCENTDYIAKDISIPEPAVGDIVVIADAGAYVASMASNYN 387

Query: 336 GINMPTIAVKNVDGTIKAIREFSYN 360
            ++ P   V   D  I         
Sbjct: 388 LLSRPAELVLEGDREILTKGHDGLE 412


>gi|20093921|ref|NP_613768.1| diaminopimelate decarboxylase [Methanopyrus kandleri AV19]
 gi|19886865|gb|AAM01698.1| Diaminopimelate decarboxylase [Methanopyrus kandleri AV19]
          Length = 405

 Score =  187 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 69/371 (18%), Positives = 124/371 (33%), Gaps = 26/371 (7%)

Query: 16  NNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGGE 73
                           V +  A+K      + + +          SL+E+ +        
Sbjct: 28  KAAREYQEAFSWFPDRVYVCYAMKANFNPYLVEHIVDETRAADVVSLWEMKVAVNAGAET 87

Query: 74  THAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG--LRINPSVSYSKF 131
                 A    EI A +     I  ++  +  + +  A+   ++    LR+NP VS    
Sbjct: 88  VVVNGNAKSSDEIRAAVERSWVINVDSFEEFQRIEKIARHEGERALVALRVNPKVSPDTH 147

Query: 132 ILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
                    S+ G +       C+  IESE     GL +H   +      FS  L+++  
Sbjct: 148 SHIATAVEGSKFGVELEIAERVCRRMIESEWVEFLGLHYHIGSQITDLRPFSEALRSVRT 207

Query: 185 EFGHFIT--QIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYS-----VQIYLEP 233
                    +I ++++GGG+        +     D  + L+E  ++         +YLEP
Sbjct: 208 FLEDTGLIEEISYLNIGGGLGIRYRRGEEVPSPHDLAEELQEDLKELHSESSGFDLYLEP 267

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP---NTGPYTA 290
           G +IV     L T+V  +    +  V VD+ + A +   L       +      +    A
Sbjct: 268 GRSIVGEAGILVTSVRQVKRGRRRWVFVDTGMNALIRPALYDAYHEVVVHGGDYSATEKA 327

Query: 291 MVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349
            V G  C +GD+  E       +  GD + F     Y  +  + +N   +P   V     
Sbjct: 328 SVAGPLCESGDVLAEDRELPIDISEGDLVVFLSAGAYCESMASNYNCYPIPGSVVVRNGE 387

Query: 350 TIKAIREFSYN 360
                R   Y 
Sbjct: 388 ITGVRRVQDYE 398


>gi|304407412|ref|ZP_07389065.1| diaminopimelate decarboxylase [Paenibacillus curdlanolyticus YK9]
 gi|304343853|gb|EFM09694.1| diaminopimelate decarboxylase [Paenibacillus curdlanolyticus YK9]
          Length = 445

 Score =  187 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 63/404 (15%), Positives = 122/404 (30%), Gaps = 43/404 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ID+  +       +   +     V +  A K F    M + + +        S 
Sbjct: 30  GTPLYVIDEAAVRQRCRDYVQSFRAHWNHVDVAYASKAFMIGQMVNLVVEEGMSLDVVSE 89

Query: 61  YEVMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+ L            ++  Y  +D    AV S   T++ + + +++  + +AQ   K 
Sbjct: 90  GELKLALWAGAPASRITFHGNYKTQDEIRLAVASGVRTLVIDCLEEIDAIEQEAQSQGKL 149

Query: 118 IG--LRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
               +R+N +++             S+ G    D          ++S    + GL FH  
Sbjct: 150 QAVDIRVNLAINVYSNPKFTTGHMESKFGLSIFDHTAMRAIAAILQSSSLMLRGLHFHLG 209

Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKD----FCQRL 218
            + +        L+ +             +   I++GGG+      Y        +   +
Sbjct: 210 SQIQEVKFHQQALERLGAFIQAVTDAHGWKPSSITMGGGMGVNYSGYARPPTPQEWADGV 269

Query: 219 KEFSEKYSVQIY-------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSV-----E 266
                ++   +        +EPG +++    T   TV  I        +           
Sbjct: 270 MPVFREHVAPLCEENVIFGIEPGRSVIAEYGTTLYTVGPIKPVPAGQDVRAFISVDGGLS 329

Query: 267 AHVPDYLLYQES------ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
            +    +                 T      + GR C   D   E      VK GD ++ 
Sbjct: 330 DNPRPIMYEAHHNVLLAAHPNAEPTDMLPVRIFGRHCET-DRMIESAPLPEVKTGDLLAV 388

Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +    Y     N +N    P +       +  AIR   + D   
Sbjct: 389 QCTGAYTYAMSNNYNRFMKPAVVFVQGGKSRLAIRREVFEDSIR 432


>gi|51597359|ref|YP_071550.1| diaminopimelate decarboxylase [Yersinia pseudotuberculosis IP
           32953]
 gi|186896467|ref|YP_001873579.1| diaminopimelate decarboxylase [Yersinia pseudotuberculosis PB1/+]
 gi|51590641|emb|CAH22283.1| diaminopimelate decarboxylase [Yersinia pseudotuberculosis IP
           32953]
 gi|186699493|gb|ACC90122.1| diaminopimelate decarboxylase [Yersinia pseudotuberculosis PB1/+]
          Length = 420

 Score =  187 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 52/398 (13%), Positives = 114/398 (28%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +  D   +   ++   +        +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWAYDGDIIAERINQLRHFDV-----IRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                            +     D      ++  +  +   ++  L++   +A      +
Sbjct: 82  RALHAGYQPGQEPAEIVFTADLLDQATLLRVTELNIPVNAGSIDMLDQLGQQA--PGHPV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G   ++       IE     + G+  H       +
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHEELPRALKKIEHYGLTLVGIHMHIGSGVD-Y 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-------- 224
                +   + ++       I  IS GGG+    +        +                
Sbjct: 199 QHLEQVCDAMVQQVITLGHDISAISAGGGLSIPYQFGDDVIDTEHYYGLWNSARERIAAH 258

Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATI 281
             + V + +EPG  +V  +  L   V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVSLEIEPGRFLVAESGVLIAQVRAVKDMGRRHYVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 282 YPNTGPYT--------AMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                            +V G  C +GD+F        E        IGD + F D   Y
Sbjct: 319 LLPADGRDLASAPLIDTVVAGPLCESGDVFTQQEGGGVETLALPAAVIGDYLVFHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    +          R  +  +  +
Sbjct: 379 GASMSSNYNSRPLLPEVLFEKGQPRLIRRRQTIEELID 416


>gi|315303911|ref|ZP_07874377.1| diaminopimelate decarboxylase [Listeria ivanovii FSL F6-596]
 gi|313627721|gb|EFR96388.1| diaminopimelate decarboxylase [Listeria ivanovii FSL F6-596]
          Length = 386

 Score =  187 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 54/385 (14%), Positives = 120/385 (31%), Gaps = 39/385 (10%)

Query: 22  LYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG-HEKFGGETHAYN 78
               +  GVK  +  A K F+A  ++  + +        S  E+       F  E   ++
Sbjct: 1   KKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSGGELYTAIKAGFPAERIHFH 60

Query: 79  VAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IGLRINPSVSYSKFILA 134
              K  +    A+       + +   +++  +D   + ++K  + +R+ P +        
Sbjct: 61  GNNKSAEEINMALDYGIGCFVLDNYYEISLLEDILIERNEKAAVLIRVTPGIEAHTHDYI 120

Query: 135 DPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
              +  S+ G    +             S   ++ GL  H   +      F    + I  
Sbjct: 121 LTGQDDSKFGFGLTNGQAEAAIKQVLHASASFDLIGLHCHIGSQIFETTGFKLAARRIMD 180

Query: 185 EFGHF----ITQIEWISLGGGIHFTDKDYPVK-DFCQRLKEFSEKYS----------VQI 229
           +   +        + ++LGGG            +  + +++  E+             +I
Sbjct: 181 KLVEWHQTLGFDSQVLNLGGGFGVRYTAEDEPLEPSEYVRQIIEEVRDVASTNAIAIPEI 240

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLYQESATIYPNTGP 287
           ++EPG ++V    T    V    E       V     +  ++   L       +   +  
Sbjct: 241 WIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYVAVDGGMSDNIRPALYDAHYDAVLAASPE 300

Query: 288 ----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343
                T  + G+ C +GD+            G+ ++      Y     + +N I  P + 
Sbjct: 301 KVPEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTGAYGYAMASNYNRIPRPPVV 360

Query: 344 VKNVDGTIKAIREFSYNDYYNN-LS 367
                     +   +Y +   N LS
Sbjct: 361 FVENGIDKLIVARETYENLVQNDLS 385


>gi|170023273|ref|YP_001719778.1| diaminopimelate decarboxylase [Yersinia pseudotuberculosis YPIII]
 gi|169749807|gb|ACA67325.1| diaminopimelate decarboxylase [Yersinia pseudotuberculosis YPIII]
          Length = 420

 Score =  186 bits (473), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 52/398 (13%), Positives = 114/398 (28%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +  D   +   ++   +        +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWAYDGDIIAERINQLRHFDV-----IRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                            +     D      ++  +  +   ++  L++   +A      +
Sbjct: 82  RALHAGYQPGQEPAEIVFTADLLDQATLLRVTELNIPVNAGSIDMLDQLGQQA--PGHPV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G   ++       IE     + G+  H       +
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHEELPRALKKIEHYGLTLVGIHMHIGSGVD-Y 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-------- 224
                +   + ++       I  IS GGG+    +        +                
Sbjct: 199 QHLEQVCDAMVQQVITLGHDISAISAGGGLSIPYQFGDDIIDTEHYYGLWNSARERIAAH 258

Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATI 281
             + V + +EPG  +V  +  L   V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVSLEIEPGRFLVAESGVLIAQVRAVKDMGRRHYVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 282 YPNTGPYT--------AMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                            +V G  C +GD+F        E        IGD + F D   Y
Sbjct: 319 LLPADGRDLASAPLIDTVVAGPLCESGDVFTQQEGGGVETLALPAAVIGDYLVFHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    +          R  +  +  +
Sbjct: 379 GASMSSNYNSRPLLPEVLFEKGQPRLIRRRQTIEELID 416


>gi|58579224|ref|YP_197436.1| diaminopimelate decarboxylase [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58417850|emb|CAI27054.1| Diaminopimelate decarboxylase [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 424

 Score =  186 bits (473), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 70/384 (18%), Positives = 129/384 (33%), Gaps = 22/384 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y      + NN         N    +  A+K  +   +   L+    G  + S  
Sbjct: 34  IGTPVYCYSLNAIKNNYIQFKENLPN-NSIICYAVKSNSNLSILSLLSSLGSGADAVSEG 92

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKAQKLHK-- 116
           E+              ++   K  +  +   +   +     ++ +L      +   +   
Sbjct: 93  EIRRAITAGISPNKIVFSGVGKTEQEISFALDNRILQLNVESIEELQLINKISYHKNIIA 152

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEK---CKDKIESEIKNVN--GLMFHNNCEN-- 169
            + +RINP+++ +           ++ G           S + N+   G+  H   +   
Sbjct: 153 PVSIRINPNINANTNDKITTGLKVNKFGIPEESLDQVFNSSLTNIKIIGISVHIGSQIAN 212

Query: 170 -KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC----QRLKEFSEK 224
              F      +K I K F      I  + +GGG+    K+  +          LK   EK
Sbjct: 213 LGIFQNTIDKVKRIVKIFEQHNIHILRVDMGGGLGIPYKNSDIFPTIQEYTNLLKNNFEK 272

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES---AT 280
            S  I  EPG AIV NT  L   VL   S   KN +++D+ +   +   L   E      
Sbjct: 273 ESYNIICEPGRAIVGNTGILLAKVLYHKSNYEKNHLVLDTGMNDLIRPALYNAEHTIIPA 332

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
           +  +    +  + G  C + D F   ++   V   + ++   V  Y  +  + +N   + 
Sbjct: 333 VVSSKSHLSFDIVGPICESDDTFAYSYWINNVDNNEIVAICTVGAYGSSMSSNYNSRPLV 392

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + N D         +YND   
Sbjct: 393 PEVIVNQDNYHIIRHRQTYNDMLK 416


>gi|254819272|ref|ZP_05224273.1| LysA_1 [Mycobacterium intracellulare ATCC 13950]
          Length = 455

 Score =  186 bits (473), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 58/396 (14%), Positives = 122/396 (30%), Gaps = 37/396 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP Y+ID+    +      Y R   GV+++ A K   +  +         G    S  E+
Sbjct: 60  TPAYVIDEADFRH--RARRYRRTLRGVEVVYAGKSLLSTAVARWARDEGLGVDVCSAGEL 117

Query: 64  MLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
                          +      D   DAV +    I+ ++  ++      A++  +++ +
Sbjct: 118 ATALTGGVDPARIVMHGNAKSPDELRDAVRAGVGRIVLDSCMEIAYLAGLARR-RQRVLI 176

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCENKS 171
           R+ P +               + G               +   I ++ GL  H   +   
Sbjct: 177 RVTPDIDIHGHRAVTTGVSDQKFGFTLAGDHAADAVARVLAHPILDLVGLHCHIGSQVSD 236

Query: 172 F----LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
                     M+  +          +  +++GGG         ++  + +    +++  +
Sbjct: 237 AALYGEAIRRMIAAMADIRARHGVILTELNIGGGHAIPYVPGDRELDLDELAAAIEDALD 296

Query: 224 KYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL 274
           +          QI +EPG AI          V  +         V     +  +    L 
Sbjct: 297 EACAAEQFPRPQIVVEPGRAISGRAGVTLYRVRSVKTQFGGRTFVAVDGGMSDNPRVALY 356

Query: 275 YQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNIN 329
             + A    N  P     T  V GR C +GD           ++ GD ++      Y+ +
Sbjct: 357 GAQYAVALANRHPLGLKQTVTVAGRHCESGDEIARDIELPADLRPGDLLAVACTGAYHHS 416

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
             + +N +  P++         + +R  +  D    
Sbjct: 417 MASNYNMVGRPSLVAVKDGRARELVRRETVADLIAR 452


>gi|16766315|ref|NP_461930.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|167994067|ref|ZP_02575159.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|16421563|gb|AAL21889.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|205328000|gb|EDZ14764.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|261248147|emb|CBG25983.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267995162|gb|ACY90047.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301159571|emb|CBW19090.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312914032|dbj|BAJ38006.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|321225691|gb|EFX50745.1| Diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|323131370|gb|ADX18800.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|332989881|gb|AEF08864.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 420

 Score =  186 bits (473), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 56/398 (14%), Positives = 113/398 (28%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D   +   +             +  A K  +   +   +        S SL E+ 
Sbjct: 27  PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRALGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D    A +S     +   +V  L +    +     ++
Sbjct: 82  RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G    D   +          + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAVMQKYRLKLVGIHMHIGSGVDYG 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223
                    + +        +E IS GGG+    +          Y       R +    
Sbjct: 200 HLEQVCGAMVRQVL-ECGQDVEAISAGGGLSIPYREGEEPVDTRHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES--- 278
             ++V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHAVKLEIEPGRFLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHRIS 318

Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     N      +V G  C +GD+F        E      V  GD +   D   Y
Sbjct: 319 ALAADGRALENGPWVETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    + +        R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 416


>gi|227325996|ref|ZP_03830020.1| diaminopimelate decarboxylase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 420

 Score =  186 bits (473), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 59/392 (15%), Positives = 118/392 (30%), Gaps = 46/392 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +  D Q ++N +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWAYDAQTIVNRIAQLRQFD-----TIRFAQKACSNTHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                            +     D      +S  +  +   +V  L +     Q     +
Sbjct: 82  RALMAGFVPGTDAHEIVFTADLLDRPTLQRVSELNIPVNAGSVDMLEQLGQ--QSPGHPV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G    D       I+     + G+  H       +
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYGDLPLALAHIQRYQLKLVGIHMHIGSGVD-Y 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                + + + ++       IE IS GGG+             + Y       R K  + 
Sbjct: 199 GHLEQVCEAMVQQVVELGQDIEAISAGGGLSIPYRHGEEAIDTEHYYGLWNAAREKIAAH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V + +EPG  +V  +  L   V  I     ++ V+VD+     +   +        
Sbjct: 259 LGHPVTLEIEPGRFLVAESGVLVAEVRAIKSMGSRHFVLVDAGFNDLMRPAMYGSYHHVS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                      +    +++ G  C +GD+F        E       ++GD + F D   Y
Sbjct: 319 LLSGDGRDISQSTLRDSVIAGPLCESGDVFTQQAGGGVETFALPDAQVGDYLVFHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFS 358
             +  + +N   +    +          R  +
Sbjct: 379 GASMSSNYNSRPLLPEVLFENGEPRLIRRRQT 410


>gi|325104209|ref|YP_004273863.1| diaminopimelate decarboxylase [Pedobacter saltans DSM 12145]
 gi|324973057|gb|ADY52041.1| diaminopimelate decarboxylase [Pedobacter saltans DSM 12145]
          Length = 391

 Score =  186 bits (473), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 66/365 (18%), Positives = 119/365 (32%), Gaps = 29/365 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+Y  D   L   L +        G  +  A+K      +   + +   G    S  E
Sbjct: 17  ETPFYYYDMGLLQQTLKSCKDASSKYGFHVHFAVKSNFNKRVLSAIKEIGFGADCVSGGE 76

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDKA--QKLHKK 117
           V    E  F      +    K      +  + D   FN  +V +L    + A  +     
Sbjct: 77  VSRAIETGFTNNDIVFAGVGKSDAEINLALDNDIFCFNVESVHELEVINELAGKKGKKAS 136

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
           + +R+NP+V              ++ G    D  +       SE     G+ FH   +  
Sbjct: 137 VAIRVNPNVDAHTHHYITTGLDENKFGVNSWDLPKIVDTLKASENIKFLGVHFHVGSQIT 196

Query: 171 S---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ---RLKEFSE- 223
               F      +  I++ F      ++ +++GGG+                   K F++ 
Sbjct: 197 DMNVFKSLCVKVNEIQQWFEERGVTVKVLNVGGGLGVDYHHPDEHSVADFETYFKIFNDF 256

Query: 224 ---KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES- 278
              K   +++ E G A+V  + +L T VL +     K+ V+VD+ +   +   L      
Sbjct: 257 LEVKPHQEVHFELGRALVAQSASLITKVLYLKHGIKKDFVVVDAGMTELMRPALYQAYHK 316

Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                             V G  C + D FG+         GD I+      Y     ++
Sbjct: 317 IENISYLDDQTKATKPYDVVGPICESSDCFGKEVELVEASRGDLIALRTAGAYGEVMASF 376

Query: 334 FNGIN 338
           +N   
Sbjct: 377 YNLRP 381


>gi|312891392|ref|ZP_07750909.1| diaminopimelate decarboxylase [Mucilaginibacter paludis DSM 18603]
 gi|311296086|gb|EFQ73238.1| diaminopimelate decarboxylase [Mucilaginibacter paludis DSM 18603]
          Length = 428

 Score =  186 bits (473), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 65/404 (16%), Positives = 121/404 (29%), Gaps = 66/404 (16%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TP+Y  D + L   L             +  A+K      + D +  Y  G    S  
Sbjct: 18  IETPFYYYDLKLLKETLQACADASAKYNFHVHYAMKANFNPRVLDLIQSYGFGADCVSGG 77

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK- 117
           EV       F      +    K  +   +A+          +V +L    D A+  +K  
Sbjct: 78  EVKAAIAHGFDKGKVVFAGVGKSDKEINEALDREIFCFNIESVQELQIINDLAKAKNKTA 137

Query: 118 -IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-----SEIKNVN--GLMFHNNCEN 169
            + +RINP+V              ++ G    +        ++  ++   G+ FH   + 
Sbjct: 138 SVAIRINPNVDAHTHHFITTGLEENKFGVNIWELPAVAEALAKCPHLKFLGIHFHIGSQI 197

Query: 170 KSFLCFSAML---KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ---RLKEFSE 223
                +  +      ++  F      I+ ++LGGG+    +       C      K F++
Sbjct: 198 TDLGVYKNLCIRVNELQLWFEERGLPIKVLNLGGGLGVDYQQPDANPICDFESYFKVFND 257

Query: 224 ----KYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES 278
               K + +++ E G A+V  +  L + VL +     KN +I+D+ +   +   L     
Sbjct: 258 FLNVKPNQEVHFELGRALVAQSAALVSRVLYVKNGIKKNFLILDAGMTELIRPMLYQAYH 317

Query: 279 ATIYPNTGPY-------------------------------------------TAMVCGR 295
                + G                                                V G 
Sbjct: 318 QIENLSRGEEAGSERQGAGSRKLEPGIGSQEAGNTDSELQTPDSRLNSPGSELKYDVVGP 377

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            C + D F +         GD I       Y     + +N    
Sbjct: 378 ICESTDCFRKDVDLPESFRGDLIVVRTAGAYGEVMASGYNLRER 421


>gi|166365281|ref|YP_001657554.1| diaminopimelate decarboxylase [Microcystis aeruginosa NIES-843]
 gi|166087654|dbj|BAG02362.1| diaminopimelate decarboxylase [Microcystis aeruginosa NIES-843]
          Length = 467

 Score =  186 bits (472), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 51/410 (12%), Positives = 111/410 (27%), Gaps = 45/410 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAG-VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P Y++D+  L       L   +    G  +++ A K +    +   + +   G    S
Sbjct: 56  GSPLYIVDEVTLRTACRQYLQGFQTHYPGESRVIYASKAWNCLALSAVVAREGLGFDVVS 115

Query: 60  LYEVMLGH------EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
             E+          +K     + +       E++  + +   II +   +L       + 
Sbjct: 116 AGEIHTVLTALDQIKKTDVPIYFHGNNKSIAELEYAIEHNCIIIVDNWLELENLVKLGEN 175

Query: 114 LHKKI---GLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMF 163
                    LR+ P +              S+ G             +   + N  GL  
Sbjct: 176 RPDTPIPILLRLTPGIECHTHEYIRTGHLDSKFGFDPHQIEAVFDYVLAHPLLNCLGLHA 235

Query: 164 HNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRL-- 218
           H   +         +   +   F         +E +++GGG+     +       +    
Sbjct: 236 HIGSQIFERQPHQDLAAVLADWFKLGLERGLPLEQLNVGGGLGIRYLESDDPPSIEEWVQ 295

Query: 219 ---------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEA 267
                     +        +  EPG +++        TV +  E  +    +     +  
Sbjct: 296 AVSLAVAKACQERGIAYPLLIAEPGRSLIATACVTAYTVGNRKEIPEIRTYIAVDGGMSD 355

Query: 268 HVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323
           +              A            + G+ C +GDI  +         GD +     
Sbjct: 356 NPRPITYQSVYRAVVANKMSQECQEVVTIAGKHCESGDILIKDITLPKTNPGDILVVLAT 415

Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN------NLS 367
             YN +  + +N +  P   +         +   +  D          LS
Sbjct: 416 GAYNYSMASNYNRLPRPAAVIVQNGEANLILERENLADLLRQDRLPNRLS 465


>gi|332160552|ref|YP_004297129.1| diaminopimelate decarboxylase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325664782|gb|ADZ41426.1| diaminopimelate decarboxylase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 420

 Score =  186 bits (472), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 53/398 (13%), Positives = 116/398 (29%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +  D + + + ++            +  A K  +   +   +++      S SL E+ 
Sbjct: 27  PVWAYDGEIITSKINQLWNFDV-----IRFAQKACSNIHILRLMHEQGVKVDSVSLGEIE 81

Query: 65  LGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
              +             +     D      ++     +   ++  L++    A      +
Sbjct: 82  RALQAGFQPGQEPAEIVFTADLLDQATLLRVTELSIPVNAGSIDMLDQLGLHA--SGHPV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G   +D       I+     + G+  H       +
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHEDLPQAIAKIQQYGLKLVGIHMHIGSGVD-Y 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-------- 224
                +   + ++       I  IS GGG+    +    +   +                
Sbjct: 199 QHLEQVCDAMVQQVIALGQDISAISAGGGLSIPYQFGDDEIDTEHYYGLWNSARERIAAH 258

Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V + +EPG  +V     L   V  + +   ++ V+VD+     +   +        
Sbjct: 259 LGHPVSLEIEPGRFLVAEAGVLIAQVRAVKNMGRRHYVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIFG-------EFHFEKPVKIGDRISFEDVAGY 326
                     N      +V G  C +GD+F        E        IGD + F D   Y
Sbjct: 319 VLPADGRSLANEPLIDTVVAGPLCESGDVFTQEAGGGLETRKLPAANIGDYLVFHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    +          R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFEQGQPRLIRRRQTIEELIA 416


>gi|312199786|ref|YP_004019847.1| diaminopimelate decarboxylase [Frankia sp. EuI1c]
 gi|311231122|gb|ADP83977.1| diaminopimelate decarboxylase [Frankia sp. EuI1c]
          Length = 444

 Score =  186 bits (472), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 55/395 (13%), Positives = 114/395 (28%), Gaps = 36/395 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+           Y     GV++  A K      +   + Q        S  E
Sbjct: 50  GTPAYVLDEATFRR--RARQYRAALPGVEVCYAGKALLTRAVARWVAQEGLSLDVCSAGE 107

Query: 63  VMLGHE-KFGGET-HAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + +     F  +    +  A    +   A+  +   I+ ++  +++     A    +++ 
Sbjct: 108 LAVARSVHFPADRLILHGNAKTPEDLKAALDYHVGRIVIDSTDEISHLGPLAH--DQRVL 165

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCENKSF 172
           LR+ P V            P  + G             ++     + GL  H   +    
Sbjct: 166 LRVTPDVDGHTHHAISTGVPDQKFGIPLGAATDAAGQVLDQPGLRLVGLHCHIGSQLTRI 225

Query: 173 ----LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS------ 222
                    ++  +          +  +++GGG                L          
Sbjct: 226 GAIEEATRRLIGLLATIRDQHGIVLAQLNIGGGHAVRYTPGDDGFDLAGLAHRLTGALAY 285

Query: 223 --EKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLY 275
             E++     ++ +EPG A++         V+ +         V     +  +    L  
Sbjct: 286 ESERHRLPAPRLTVEPGRALIAQAGITLYRVITVKHLPGVRTFVAVDGGMSDNPRPALYG 345

Query: 276 QES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINR 330
                           + A V GR C AGDI          +  GD ++      Y+ + 
Sbjct: 346 ARYTLQLIGRRSLAASHPATVVGRHCEAGDILARDVPLPGDIHAGDLLAVATTGAYHHSL 405

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            + +N +  P +   +       IR  +  D    
Sbjct: 406 ASTYNLVGRPPLVAVHDGTARLLIRRETEEDLLTR 440


>gi|227112405|ref|ZP_03826061.1| diaminopimelate decarboxylase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 420

 Score =  186 bits (472), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 60/392 (15%), Positives = 119/392 (30%), Gaps = 46/392 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +  D Q ++N +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWAYDAQTIVNRIAQLRQFD-----TIRFAQKACSNTHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGH-EKF----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                 F          +     D      +S  +  +   +V  L +     Q     +
Sbjct: 82  RALIAGFVPGTDAHEIVFTADLLDRPTLQRVSELNIPVNAGSVDMLEQLGQ--QSPGHPV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G    D       I+     + G+  H       +
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYGDLPLALAHIQRYQLKLVGIHMHIGSGVD-Y 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                + + + ++       IE IS GGG+             + Y       R K  + 
Sbjct: 199 GHLEQVCEAMVQQVVELGQDIEAISAGGGLSIPYRHGEEAIDTEHYYGLWNAAREKIAAH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V + +EPG  +V  +  L   V  I     ++ V+VD+     +   +        
Sbjct: 259 LGHPVTLEIEPGRFLVAESGVLVAEVRAIKSMGSRHFVLVDAGFNDLMRPAMYGSYHHVS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                      +    +++ G  C +GD+F        E       ++GD + F D   Y
Sbjct: 319 LLPGDGRDISQSTLRDSVIAGPLCESGDVFTQQAGGGVETFALPDAQVGDYLVFHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFS 358
             +  + +N   +    +          R  +
Sbjct: 379 GASMSSNYNSRPLLPEVLFENGEPRLIRRRQT 410


>gi|161615953|ref|YP_001589918.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|197263510|ref|ZP_03163584.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|161365317|gb|ABX69085.1| hypothetical protein SPAB_03752 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|197241765|gb|EDY24385.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
          Length = 420

 Score =  186 bits (472), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 55/398 (13%), Positives = 113/398 (28%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D   +   +             +  A K  +   +   +        S SL E+ 
Sbjct: 27  PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRAQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D    A +S     +   +V  L +    +     ++
Sbjct: 82  RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G    D   +          + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAVMQKYRLKLVGIHMHIGSGVDYG 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223
                    + +        ++ IS GGG+    +          Y       R +    
Sbjct: 200 HLEQVCGAMVRQVL-ECGQDLDAISAGGGLSIPYREGEEPVDTRHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES--- 278
             ++V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHAVKLEIEPGRFLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHRIS 318

Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     N      +V G  C +GD+F        E      V  GD +   D   Y
Sbjct: 319 ALAADGRALENGPWVETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    + +        R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 416


>gi|172056531|ref|YP_001812991.1| diaminopimelate decarboxylase [Exiguobacterium sibiricum 255-15]
 gi|171989052|gb|ACB59974.1| diaminopimelate decarboxylase [Exiguobacterium sibiricum 255-15]
          Length = 437

 Score =  186 bits (471), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 62/398 (15%), Positives = 126/398 (31%), Gaps = 36/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++ +++L + L T       K        A K      ++  + ++  G    + 
Sbjct: 29  GTPLYVMAERELTDRLATVRDAFLKKYPNTYASFASKALTIGAVYQQVVRHGLGIDVVTG 88

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+ +        E   ++ + K  +            I+ +   ++ +    A      
Sbjct: 89  GELFIARKAGVPAERIYFHGSNKSTQDLQYAVKEGVGKIVIDHYGEIAQLNQIAGDTCQT 148

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
            ++ +RI P V              ++ G    D          + +E   + G+  H  
Sbjct: 149 VQVLIRIVPQVIGGAHTKIQTGGVDTKFGFSTHDDSYLQAVEAVLAAEHLVLLGIHCHVG 208

Query: 167 CENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK----DFCQRL 218
            + +    F      M+  +E            ++LGGG                  +R+
Sbjct: 209 SQIQEIELFERTARTMMGFVETIRERTSFVASEVNLGGGFGIAYTQDDQPLDFEQTMERV 268

Query: 219 KEFSEKYSVQIYL-------EPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHV 269
               ++ + ++ +       EPG  +V N  T   TV  I E         VD  +  ++
Sbjct: 269 MAIIDEETTRLAIDRPRIGIEPGRWVVANAGTTLYTVGAIKEVQGVRTYLSVDGGMADNI 328

Query: 270 PDYLLYQESATI---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
              L      T+             V G +C +GD+  E         GD ++      Y
Sbjct: 329 RPALYGAVYETVIANRIKGETRHVTVVGAACESGDLVAESADLAEPVSGDTLAVFGTGAY 388

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           N +  + +N    P +   N   + + +R  +Y D   
Sbjct: 389 NYSMASNYNQFLRPAVVFVNQGESREVVRRQTYADLIQ 426


>gi|167550108|ref|ZP_02343865.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|168242786|ref|ZP_02667718.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|194450314|ref|YP_002046984.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194408618|gb|ACF68837.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|205324678|gb|EDZ12517.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205338125|gb|EDZ24889.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
          Length = 420

 Score =  186 bits (471), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 56/398 (14%), Positives = 113/398 (28%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D   +   +             +  A K  +   +   +        S SL E+ 
Sbjct: 27  PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRAQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D    A +S     +   +V  L +    +     ++
Sbjct: 82  RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G    D   +          + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAVMQKYRLKLVGIHMHIGSGVDYG 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223
                    + +        +E IS GGG+    +          Y       R +    
Sbjct: 200 HLEQVCGAMVRQVL-ECGQDVEAISAGGGLSIPYREGEEPVDTRHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES--- 278
             ++V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHAVKLEIEPGRYLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHRIS 318

Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     N      +V G  C +GD+F        E      V  GD +   D   Y
Sbjct: 319 ALAADGRALENGPWVETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    + +        R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 416


>gi|253689848|ref|YP_003019038.1| diaminopimelate decarboxylase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251756426|gb|ACT14502.1| diaminopimelate decarboxylase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 420

 Score =  186 bits (471), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 59/392 (15%), Positives = 119/392 (30%), Gaps = 46/392 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +  D Q ++N +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWAYDAQTIVNRIAQLRQFD-----TIRFAQKACSNTHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGH-EKF----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                 F          +     D      +S  +  +   +V  L +     Q     +
Sbjct: 82  RALIAGFVPGTDAHEIVFTADLLDRPTLQRVSELNIPVNAGSVDMLEQLGQ--QSPGHPV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G    D       I+     + G+  H       +
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYGDLPLALAHIQRYQLKLVGIHMHIGSGVD-Y 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                + + + ++       IE IS GGG+             + Y       R K  + 
Sbjct: 199 GHLEQVCEAMVRQVVELGQDIEAISAGGGLSIPYRHGEEAIDTEHYYGLWNAAREKIAAH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V + +EPG  +V  +  L   V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHPVTLEIEPGRFLVAESGVLVAEVRAVKSMGSRHFVLVDAGFNDLMRPAMYGSYHHVS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                      +    +++ G  C +GD+F        E       ++GD + F D   Y
Sbjct: 319 LLPGDGRDISQSTLRDSVIAGPLCESGDVFTQQAGGGVETFALPDAQVGDYLVFHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFS 358
             +  + +N   +    +          R  +
Sbjct: 379 GASMSSNYNSRPLLPEVLFENGEPRLIRRRQT 410


>gi|329296888|ref|ZP_08254224.1| diaminopimelate decarboxylase [Plautia stali symbiont]
          Length = 417

 Score =  186 bits (471), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 59/395 (14%), Positives = 119/395 (30%), Gaps = 43/395 (10%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P++  D + +   +             +  A K  +   +   +        S SL E+ 
Sbjct: 27  PFWAYDAEIIQQRIAQL-SAFDV----VRFAQKACSNIHILRLMRAAGVKVDSVSLGEIE 81

Query: 65  LGHEKF---GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-AQKLHKKIGL 120
                    GGE   +     D    A     +  +      ++      A      + L
Sbjct: 82  RALAAGFQPGGEDIVFTADVLDSPTLAR--IAELKVPVNAGSVDMLHQLGAVSPGHSVWL 139

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174
           RINP   +      +     S+ G    D       I      + GL  H       +  
Sbjct: 140 RINPGFGHGHSQKTNTGGENSKHGIWHSDLPLALAAIPQHGLQLVGLHMHIGSGVD-YGH 198

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK------ 224
              +   +  +   F   ++ IS GGG+        +    + +        E+      
Sbjct: 199 LQQVCDAMVDQVVAFGQDLQAISAGGGLSIPYRFSEEAIDTQHYYGLWNGARERIAAHLG 258

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATIY- 282
           ++V++ +EPG  +V  +  L + V  +     ++ V+VD+     +   +          
Sbjct: 259 HAVKLEIEPGRFLVAESGVLVSQVRAVKQMGSRHFVLVDAGFSDLMRPSMYGSYHHISLL 318

Query: 283 ------PNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNIN 329
                 P      ++V G  C +GD+F        E       K+GD + F D   Y  +
Sbjct: 319 PADGSAPGEANVESVVAGPLCESGDVFTQREGGKVETRALPAAKVGDYLVFHDTGAYGAS 378

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             + +N   +    +       +  R  +  +   
Sbjct: 379 MSSNYNSRPLIPEVLFEQGVPREIRRAQTIQELLA 413


>gi|51246812|ref|YP_066696.1| diaminopimelate decarboxylase [Desulfotalea psychrophila LSv54]
 gi|50877849|emb|CAG37689.1| probable diaminopimelate decarboxylase [Desulfotalea psychrophila
           LSv54]
          Length = 419

 Score =  186 bits (471), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 60/393 (15%), Positives = 122/393 (31%), Gaps = 36/393 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           TP+++ D+  +               G +   A+K      +   + +   G   SS+ E
Sbjct: 24  TPFHIYDEAGIKQTGTRLKQAFSGIDGFREYFAVKALPNPAIMKIMQEMGFGFDCSSVAE 83

Query: 63  VMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           ++L  +    G+   +       +  I A       +  +           A+       
Sbjct: 84  LILSRKLGAKGDEIMFTSNNTSPEEFIAAAEDGGCILNLDD------ISLIAKVPKMPET 137

Query: 120 LRINPSVSYSKFILADPNRP-FSRLGEKCKDKIESEIKNVN------GLMFHNNCE---- 168
           +    +    +        P  ++ G   +  IE+            GL           
Sbjct: 138 ICFRYNPGERRTGNDIIGTPVEAKYGVSHEQIIEAYRLAKKAGAKRFGLHTMLASNELNY 197

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSE- 223
           +        +L  +EK       + ++I++GGG+    +       ++   + +    + 
Sbjct: 198 SYMVQTAQMLLALVEKISAELDIKFDFINIGGGLGIPYQPEQNELDLESMAREITAIFDL 257

Query: 224 -----KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                 Y   +Y+E G  I      L T+V++  E  ++ V VD+ + A +   L     
Sbjct: 258 FKEKNDYCPALYMESGRFITGPHGILVTSVINKKEIYRDYVGVDACMNALMRPALYGSYH 317

Query: 279 ATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                            V G  C   D F         + GD +  +D   +       +
Sbjct: 318 HIEVLGKETGATTKKVDVAGSLCENNDKFAIQRDLPICENGDLLIIQDTGAHGHAMGFNY 377

Query: 335 NGINMPTIAVKNVDG-TIKAIREFSYNDYYNNL 366
           NG   P   + + +G T    RE   +DY+  L
Sbjct: 378 NGKMRPQELLFDSEGNTALIRREERLSDYFATL 410


>gi|16761791|ref|NP_457408.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29143275|ref|NP_806617.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|213163566|ref|ZP_03349276.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213425813|ref|ZP_03358563.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213865437|ref|ZP_03387556.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
 gi|25290925|pir||AG0867 diaminopimelate decarboxylase [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16504093|emb|CAD02839.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29138909|gb|AAO70477.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 420

 Score =  186 bits (471), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 56/398 (14%), Positives = 112/398 (28%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D   +   +             +  A K  +   +   +        S SL E+ 
Sbjct: 27  PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRAQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D    A +S     +   +V  L +    +     ++
Sbjct: 82  RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G    D   +          + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAVMQKYRLKLVGIHMHIGSGVDYG 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223
                    + +        +E IS GGG+               Y       R +    
Sbjct: 200 HLEQVCGAMVRQVL-ECGQDVEAISAGGGLSIPYHEGEEPVDTRHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES--- 278
             ++V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHAVKLEIEPGRYLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHRIS 318

Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     N      +V G  C +GD+F        E      V  GD +   D   Y
Sbjct: 319 ALAADGRALENGPWVETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    + +        R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 416


>gi|300781428|ref|ZP_07091282.1| diaminopimelate decarboxylase [Corynebacterium genitalium ATCC
           33030]
 gi|300533135|gb|EFK54196.1| diaminopimelate decarboxylase [Corynebacterium genitalium ATCC
           33030]
          Length = 466

 Score =  186 bits (471), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 46/403 (11%), Positives = 108/403 (26%), Gaps = 41/403 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP  ++D+    +     +         +  A K F    +   +N+       +S  E
Sbjct: 62  GTPVMVVDEDDFRSRCRDMVRAYGKPE-NVHYASKAFLTTHIARWVNEEGLSLDVASENE 120

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQK--LHKK 117
           +++     F  E    +   K               ++ ++  +L + +  A +    ++
Sbjct: 121 LLIALHAGFPAERITVHGNNKPDSFLRRCVREGVGEVVIDSHQELEELERIAGEEGTVQE 180

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNNCE 168
           + +R+ P V          +    + G                E++   + GL  H   +
Sbjct: 181 VFIRVKPGVEAHTHEFIATSHEDQKFGLSLVSGSAYRAAVAASEADNIQLTGLHCHVGSQ 240

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQ---------------IEWISLGGGIHFTDKDYPVKD 213
                 F      +   +     +               I + +    +   D    +  
Sbjct: 241 VFDAEGFKLAAARVLGLYAQIYRELGLELGYLDLGGGYGIAYTNEEQPLAVDDVAKDLLK 300

Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS------VEA 267
                 +       ++ +EPG AI         +V  + +                 +  
Sbjct: 301 AVAEKADELGITPPEVIVEPGRAIAGPAAVTVYSVGTVKDVHVTDEATRRYIAVDGGMSD 360

Query: 268 HVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFED 322
           ++   L   +          +  P    + G  C +GDI          +  GD I+   
Sbjct: 361 NIRTALYGADYDARVVNRLTDGTPQATRMVGAHCESGDILINNALWPDDIASGDLIALAA 420

Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              Y  +  + +N    P +           +R  +  D    
Sbjct: 421 TGAYCYSMASNYNCFGRPAVVSVKDGVVTPMVRRETVEDILAR 463


>gi|56414960|ref|YP_152035.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197363889|ref|YP_002143526.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|56129217|gb|AAV78723.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197095366|emb|CAR60924.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 420

 Score =  186 bits (471), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 56/398 (14%), Positives = 113/398 (28%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D   +   +             +  A K  +   +   +        S SL E+ 
Sbjct: 27  PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRAQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D    A +S     +   +V  L +    +     +I
Sbjct: 82  RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRI 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G    D   +          + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAVMQKYRLKLVGIHMHIGSGVDYG 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223
                    + +        ++ IS GGG+    +          Y       R +    
Sbjct: 200 HLEQVCGAMVRQVL-ECGQDLDAISAGGGLSIPYREGEEPVDTRHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES--- 278
             ++V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHAVKLEIEPGRFLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHRIS 318

Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     N      +V G  C +GD+F        E      V  GD +   D   Y
Sbjct: 319 ALAADGRALENGPWVETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    + +        R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 416


>gi|196232014|ref|ZP_03130869.1| diaminopimelate decarboxylase [Chthoniobacter flavus Ellin428]
 gi|196223736|gb|EDY18251.1| diaminopimelate decarboxylase [Chthoniobacter flavus Ellin428]
          Length = 429

 Score =  185 bits (470), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 72/409 (17%), Positives = 128/409 (31%), Gaps = 48/409 (11%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP++L D + +   +    ++    GV+   A+K   A  +   +        + S  
Sbjct: 15  VGTPFWLYDARVIRQRIADIQFLTDTEGVQARFAMKACPATKVLKEMKAANIWIDAVSGN 74

Query: 62  EVMLGHEKF------GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           EV+                      ++D  +  VL N       +  Q+   K       
Sbjct: 75  EVLRALRAGHPTGHQPPVICLTCDVFRDNALPVVLENGILPNIGSPGQIADLKKA--GYS 132

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCEN 169
             I +R+NP   +      D   P S+ G   +D   ++         +  L  H     
Sbjct: 133 GPISVRVNPGFGHGHVNACDTGGPSSKHGIWLEDLFATKEMADKAGLEITMLHAHIGSGP 192

Query: 170 KSFLCFSAMLKNIEKE--FGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
           +       + +   +        T++  ISLGGGI    +D+  +   + L E       
Sbjct: 193 QFQELHDNLTRLAAEFVTLLEKFTKVNTISLGGGIPHNYRDHGAQVPIEPLHELFASCHQ 252

Query: 228 QIY----------LEPGEAIVTNTTTLNTTVLDISENIKN-------LVIVDSSVEAHVP 270
           ++           +EPG   V    TL T V D+ +   N         +VD+     V 
Sbjct: 253 RLVSKARRDLRLEIEPGRYYVAPGCTLVTRVTDVKQTRSNEKGSGATFAMVDAGFVDLVR 312

Query: 271 DYLLYQESATIYPNTGP-------YTAMVCGRSCLAGDIFGEF-------HFEKPVKIGD 316
             +     A                  +V G  C +GDIF                  GD
Sbjct: 313 PAMYGSYHAIDIVGKDDEDPNVPREPIVVAGPLCESGDIFTRDDRELLAPRLLPRPAAGD 372

Query: 317 RISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI-REFSYNDYYN 364
            ++  D   Y     + +N I          DG+++ I R  + +D   
Sbjct: 373 LLTLRDAGAYGYAMSSNYNSIGRAPQLWLEDDGSVEIISRRENIDDLLK 421


>gi|317506159|ref|ZP_07963981.1| diaminopimelate decarboxylase [Segniliparus rugosus ATCC BAA-974]
 gi|316255547|gb|EFV14795.1| diaminopimelate decarboxylase [Segniliparus rugosus ATCC BAA-974]
          Length = 451

 Score =  185 bits (470), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 55/401 (13%), Positives = 125/401 (31%), Gaps = 41/401 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P +++DK    +               +  A K F +  +   L++        S  E
Sbjct: 46  GSPLFVVDKDDFTDRCRRWAEAFGPRN--VHYASKAFLSGQLAHWLDEEGLALDVCSGGE 103

Query: 63  VMLG-HEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F       +   K       AV    + ++ ++  ++ +  +   +L   + 
Sbjct: 104 LAIALRGGFPPGRITLHGNNKSVAELRRAVDVGVEAVVLDSFEEIARLDEVCAELGREQD 163

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G         E  +  +      + G   H   +
Sbjct: 164 VLVRLTVGVEAHTHEAIATAHEDQKFGFSVASGVALEAVRRVLARPRLRLIGFHSHIGSQ 223

Query: 169 NKSFLCFSAMLKNIEKEFGHF------ITQIEWISLGGGIHFTDKDY----PVKDFCQRL 218
                 F      +             I  +  + LGGG+  + +         D  + +
Sbjct: 224 ILDLDGFRLAAGRVAAFAEEAVRALGAIPTLRVLDLGGGLGVSYQPDERPPAPSDLAEAV 283

Query: 219 KEFSEKYSV----QIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDSSVEAH 268
           ++  E+Y       + +EPG +++ + T    TV  +          +  V VD  +  +
Sbjct: 284 RKEIEQYPAAAGLSVAVEPGRSVIASGTVTLYTVGTVKHVVLDGGATRTYVSVDGGMSDN 343

Query: 269 VPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDV 323
           +   L   +      +    + P  + V G+ C  GDI          V  GD ++    
Sbjct: 344 IRPALYGAKYDARLVSRVGASEPAQSRVVGKHCETGDILVRDCLLPQDVAPGDVLAVAST 403

Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             Y  +  + +N +  P +A      +   +R  +  D  +
Sbjct: 404 GAYCYSLSSRYNALLRPAVAAVEDGRSWLMLRRETEADLLS 444


>gi|168231114|ref|ZP_02656172.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|194444444|ref|YP_002042264.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194471848|ref|ZP_03077832.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|197251631|ref|YP_002147923.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|238909791|ref|ZP_04653628.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|194403107|gb|ACF63329.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194458212|gb|EDX47051.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|197215334|gb|ACH52731.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|205334564|gb|EDZ21328.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
          Length = 420

 Score =  185 bits (470), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 56/398 (14%), Positives = 113/398 (28%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D   +   +             +  A K  +   +   +        S SL E+ 
Sbjct: 27  PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRAQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D    A +S     +   +V  L +    +     ++
Sbjct: 82  RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G    D   +          + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAVMQKYRLKLVGIHMHIGSGVDYG 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223
                    + +        +E IS GGG+    +          Y       R +    
Sbjct: 200 HLEQVCGAMVRQVL-ECGQDVEAISAGGGLSIPYREGEEPVDTRHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES--- 278
             ++V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHAVKLEIEPGRFLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHRIS 318

Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     N      +V G  C +GD+F        E      V  GD +   D   Y
Sbjct: 319 ALAADGRALENGPWVETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    + +        R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 416


>gi|300718186|ref|YP_003742989.1| Diaminopimelate decarboxylase [Erwinia billingiae Eb661]
 gi|299064022|emb|CAX61142.1| Diaminopimelate decarboxylase [Erwinia billingiae Eb661]
          Length = 417

 Score =  185 bits (470), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 59/396 (14%), Positives = 121/396 (30%), Gaps = 44/396 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +  D   +   +             +  A K  +   +   +        S SL E+ 
Sbjct: 27  PVWAYDASVIAERISQLQQFDV-----VRFAQKACSNIHILRLMRAAGVKVDSVSLGEIE 81

Query: 65  LGH-EKF--GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGL 120
                 F  GG+   +     D    A L+     +   +V  L++  + ++     + L
Sbjct: 82  RALVAGFTPGGDEIVFTADVLDEPTLARLAELKIPVNAGSVDMLHQLGEVSEGHP--VWL 139

Query: 121 RINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSFLC 174
           R+NP   +      +     S+ G          + I+     + G+  H       +  
Sbjct: 140 RVNPGFGHGHSQKTNTGGENSKHGIWYTDLVLALEAIKQHRLKLVGIHMHIGSGVD-YAH 198

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE-K 224
              +   +  +       +E IS GGG+             + Y       R +      
Sbjct: 199 LEQVCDAMVNQVIGLGHDLEAISAGGGLSIPYRFGEEAINTEHYFGLWDAARQRVAKHLG 258

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA---- 279
           + V++ +EPG  +V  +  L + V  +     ++ V+VD+     +   +          
Sbjct: 259 HPVKLEIEPGRFLVAESGVLVSKVRAVKAMGSRHFVLVDAGFNDLMRPAMYGSYHHISAI 318

Query: 280 ----TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNI 328
                         ++V G  C +GD+F        E      VK GD + F D   Y  
Sbjct: 319 AGDDRPLDEQNTVDSVVAGPLCESGDVFTQLEGGKVETRALPQVKPGDYLVFHDTGAYGA 378

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +  + +N   +    +       +  R  +  +   
Sbjct: 379 SMSSNYNSRPLLPEVLFEAGQPREIRRPQTIQELLA 414


>gi|168820255|ref|ZP_02832255.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|200388738|ref|ZP_03215350.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|207858276|ref|YP_002244927.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|199605836|gb|EDZ04381.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205342949|gb|EDZ29713.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|206710079|emb|CAR34434.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|320087440|emb|CBY97205.1| Diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
          Length = 420

 Score =  185 bits (470), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 56/398 (14%), Positives = 113/398 (28%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D   +   +             +  A K  +   +   +        S SL E+ 
Sbjct: 27  PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRAQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D    A +S     +   +V  L +    +     ++
Sbjct: 82  RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G    D   +          + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAVMQKYRLKLVGIHMHIGSGVDYG 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223
                    + +        +E IS GGG+    +          Y       R +    
Sbjct: 200 HLEQVCGAMVRQVL-ECGQDVEAISAGGGLSIPYREGEEPVDTRHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES--- 278
             ++V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHAVKLEIEPGRFLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHRIS 318

Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     N      +V G  C +GD+F        E      V  GD +   D   Y
Sbjct: 319 ALAADGRALENGPWVETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    + +        R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 416


>gi|119715978|ref|YP_922943.1| diaminopimelate decarboxylase [Nocardioides sp. JS614]
 gi|119536639|gb|ABL81256.1| diaminopimelate decarboxylase [Nocardioides sp. JS614]
          Length = 466

 Score =  185 bits (470), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 61/404 (15%), Positives = 117/404 (28%), Gaps = 43/404 (10%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y++D+      +    +    A   +  A K F    +   + +        S  
Sbjct: 59  VNTPAYVLDEADFR--MRARAFRDAFAAYDVFYAGKAFLCTTVARWVQEEGLCLDVCSNG 116

Query: 62  EVMLG-HEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHK 116
           E+ +     F      Y+   K       A+ +    II ++  +L + +       L  
Sbjct: 117 ELTVALRAGFDPARIGYHGNNKTVTELRRALAAGVGRIIVDSFDELARLEMITADSGLPA 176

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNC 167
           ++ +R+   V               + G            +    +   ++ GL  H   
Sbjct: 177 RVMIRVTAGVEAHTHEYIATAHEDQKFGFSITSGDAFEAARRAEAAPGIDLLGLHSHIGS 236

Query: 168 EN----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223
           +        +    +L    +        +  + LGGG               +L     
Sbjct: 237 QIFDSSGFEVAARRVLALQARISQELGVTLPEMDLGGGFGIAYTTQDDPAEPAQLAPAMT 296

Query: 224 KYSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI------KNLVIVDSSVE 266
           K                 +EPG AIV        TV  +          +  V VD  + 
Sbjct: 297 KIVEHECRALGIPEPRLSIEPGRAIVGPAMCTVYTVGTVKPVQLDGGAVRTYVSVDGGMS 356

Query: 267 AHVPDYLLYQESATIY-----PNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISF 320
            ++   L   + +           G   A V G+ C AGDI  +  F    V+ GD ++ 
Sbjct: 357 DNIRTALYDADYSCTLASRPSTIGGSVLARVVGKHCEAGDIVVKDEFLPADVRPGDLVAV 416

Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
                Y  +  + +N    P +           +R  + +D   
Sbjct: 417 PGTGAYCRSMASNYNHALRPPVVAVRDGVARVVVRRETEDDLLA 460


>gi|198243318|ref|YP_002216988.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|197937834|gb|ACH75167.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|326624755|gb|EGE31100.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
          Length = 420

 Score =  185 bits (470), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 56/398 (14%), Positives = 113/398 (28%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D   +   +             +  A K  +   +   +        S SL E+ 
Sbjct: 27  PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRAQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D    A +S     +   +V  L +    +     ++
Sbjct: 82  RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G    D   +          + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAIMQKYRLKLVGIHMHIGSGVDYG 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223
                    + +        +E IS GGG+    +          Y       R +    
Sbjct: 200 HLEQVCGAMVRQVL-ECGQDVEAISAGGGLSIPYREGEEPVDTRHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES--- 278
             ++V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHAVKLEIEPGRFLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHRIS 318

Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     N      +V G  C +GD+F        E      V  GD +   D   Y
Sbjct: 319 ALAADGRALENGPWVETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    + +        R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 416


>gi|326629067|gb|EGE35410.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 420

 Score =  185 bits (470), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 56/398 (14%), Positives = 114/398 (28%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D   +   +             +  A K  +   +   +        S SL E+ 
Sbjct: 27  PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRAQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D    A +S     +   +V  L +    +     ++
Sbjct: 82  RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G    D   +          + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAVMQKYRLKLVGIHMHIGSGVDYG 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223
                    + +        +E IS GGG+  + +          Y       R +    
Sbjct: 200 HLEQVCGAMVRQVL-ECGQDVEAISAGGGLSISYREGEEPVDTRHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES--- 278
             ++V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHAVKLEIEPGRFLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHRIS 318

Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     N      +V G  C +GD+F        E      V  GD +   D   Y
Sbjct: 319 ALAADGRALENGPWVETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    + +        R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 416


>gi|168463825|ref|ZP_02697742.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|195633600|gb|EDX52014.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
          Length = 420

 Score =  185 bits (470), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 57/398 (14%), Positives = 112/398 (28%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D   +   +             +  A K  +   +   +        S SL E+ 
Sbjct: 27  PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRAQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D    A +S     +   +V  L +    +     +I
Sbjct: 82  RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRI 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G    D   +          + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAVMQKYRLKLVGIHMHIGSGVDYG 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223
                    + +        +E IS GGG+               Y       R +    
Sbjct: 200 HLEQVCGAMVRQVL-ECGQDVEAISAGGGLSIPYHEGEEPVDTRHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES--- 278
             ++V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHAVKLEIEPGRFLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHRIS 318

Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     N      +V G  C +GD+F        E      V  GD +   D   Y
Sbjct: 319 ALAADGRALENGPWVETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    + +        R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 416


>gi|119960514|ref|YP_948333.1| diaminopimelate decarboxylase [Arthrobacter aurescens TC1]
 gi|119947373|gb|ABM06284.1| diaminopimelate decarboxylase [Arthrobacter aurescens TC1]
          Length = 490

 Score =  185 bits (470), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 62/427 (14%), Positives = 117/427 (27%), Gaps = 64/427 (14%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA------GVKLLLALKCFAAWGMFDTLNQYMDGTT 56
            TP +++ +                A      GV +  A K F    +   + +      
Sbjct: 57  GTPLFVMSESDFRARARAFKDAFDAAFADICGGVDVYYAGKSFLCTAVASWVAEEGLRLD 116

Query: 57  SSSLYE-VMLGHEKF-GGETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
           + S  E  +       G     +     D E   A+      I+ +++ +L +    A  
Sbjct: 117 TCSGGELAVAARAGIEGPNLGLHGNNKSDAEINRALDMLLGRIVVDSLDELERVAKIASS 176

Query: 114 L--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-----------------KIESE 154
                K+ LR+ P V               + G    +                      
Sbjct: 177 RGETAKVMLRLTPGVHAHTHEFIATAHEDQKFGLSMAEDSTEEAGLSAAEEAVAAATSYA 236

Query: 155 IKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYP 210
              + GL  H   +      F+   + +         +    +  + LGGG         
Sbjct: 237 SIELLGLHCHIGSQIFEPDGFAVAAEKLLGFLAAMQAKYSIVMPELDLGGGYGIAYTPVD 296

Query: 211 VKDFCQRLKE-----------FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE------ 253
                  + +             +    +I +EPG AIV +TT     V  +        
Sbjct: 297 TPRPAAEIAQAMADVVRSKCAELDITPPRISIEPGRAIVGSTTFTLYEVGTLKTVRVDAP 356

Query: 254 ----------NIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRSCLA 299
                       +  V VD  +  +    L   + + I      +  P  + V G+ C +
Sbjct: 357 EGEETQENVTYPRRYVSVDGGMSDNARPVLYDADYSAILASRNSSAAPQLSRVVGKHCES 416

Query: 300 GDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFS 358
           GDI     +    V  GD ++      Y     + +N +  P +           +R  +
Sbjct: 417 GDIVVRDVYLPADVAAGDLLAVPGTGAYCWALSSNYNYLARPGVVAVRDGAARLIVRGET 476

Query: 359 YNDYYNN 365
             D  N 
Sbjct: 477 EEDLLNR 483


>gi|71897691|ref|ZP_00679936.1| Aspartate kinase [Xylella fastidiosa Ann-1]
 gi|71732594|gb|EAO34647.1| Aspartate kinase [Xylella fastidiosa Ann-1]
          Length = 868

 Score =  185 bits (470), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 52/362 (14%), Positives = 99/362 (27%), Gaps = 24/362 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y+     +         +          A+K      +  TL +   G    SL E+ 
Sbjct: 510 PCYVYHLPTVRERARQLNAVAAVDQC--YYAIKANPHPAILRTLIEEGFGLECVSLGELR 567

Query: 65  LGHEKFG---GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
              E           +  ++               +     +  +   +  +  + + LR
Sbjct: 568 HAFEVVPHLVPSRVLFTPSFASRVEYEQAFLLGVNVTLDNVEALRLWPEVFR-ERTLWLR 626

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSFLCF 175
           I+                 S+ G   K   E           V GL  H     +    +
Sbjct: 627 IDLGYGDGHHEKVTTGGKTSKFGLSVKRIDEFIDVAKTLNITVTGLHAHLGSGVERGNHW 686

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF-----CQRLKEFSEKYSVQIY 230
           S M   +          +  + +GGG+    +                +  +     Q+ 
Sbjct: 687 SRMYDELAGFASRIG-SVSTLDIGGGLPIPYRPDDEPFDVGAWGASLAEVKALHPKFQLV 745

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIYPNTGPYT 289
           +EPG  +V     L T V  + E      V +++ +   +   L          +    T
Sbjct: 746 IEPGRFLVAEAGVLLTRVTQVIEKDDILRVGLEAGMHTLIRPALYDAWHGVENLSRLDET 805

Query: 290 ----AMVCGRSCLAGDIFGEFHFEKPVKI-GDRISFEDVAGYNINRKNWFNGINMPTIAV 344
                 V G  C + D+FG           GD +   D   Y  +  + +N   +P   V
Sbjct: 806 PHVLCDVVGPICESSDVFGRRRHLPAATASGDLMLIADAGAYGFSMASTYNLRGLPAEVV 865

Query: 345 KN 346
            +
Sbjct: 866 LD 867


>gi|308187988|ref|YP_003932119.1| Diaminopimelate decarboxylase [Pantoea vagans C9-1]
 gi|308058498|gb|ADO10670.1| Diaminopimelate decarboxylase [Pantoea vagans C9-1]
          Length = 418

 Score =  185 bits (469), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 56/396 (14%), Positives = 111/396 (28%), Gaps = 44/396 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P++  D Q +   +             +  A K  +   +   +        S SL E+ 
Sbjct: 27  PFWAYDAQIIQARIAQLQ-AFDV----VRFAQKACSNIHILRLMRAAGVKVDSVSLGEIE 81

Query: 65  LGHEKF---GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-AQKLHKKIGL 120
                    GG+   +     D    A        +      ++      A      + L
Sbjct: 82  RALAAGYQSGGDEIVFTADLFDQPTLAR--ITALKVPVNAGSIDMLHQLGAVSPGHAVWL 139

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174
           R+NP   +      +     S+ G    D       I+     + G+  H       +  
Sbjct: 140 RVNPGFGHGHSQKTNTGGENSKHGIWHDDLDEALAAIKQHGLKLVGIHMHIGSGVD-YSH 198

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE-K 224
              +   + +        +  IS GGG+               Y       R +      
Sbjct: 199 LQQVCDAMVELVMASGQDLTAISAGGGLSIPYRYGEEAIDTDHYFGLWDAARQRIAQHLG 258

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
           ++V++ +EPG  +V     L + V  +     ++ V+VD+     +   +          
Sbjct: 259 HAVKLEIEPGRFLVAEAGVLVSQVRAVKSMGSRHFVLVDAGFSDLMRPSMYGSYHHISLM 318

Query: 284 NTGPY--------TAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNI 328
                          +V G  C +GD+F        E       K+GD + F D   Y  
Sbjct: 319 AGDERAIDEQQTIDTVVAGPLCESGDVFTQLEGGMVEPRAMPTAKVGDYLVFHDTGAYGA 378

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +  + +N   +    +       +  R  +      
Sbjct: 379 SMSSNYNSRPLIPEVLFEQGQPREIRRAQTIESLLA 414


>gi|50122573|ref|YP_051740.1| diaminopimelate decarboxylase [Pectobacterium atrosepticum
           SCRI1043]
 gi|49613099|emb|CAG76550.1| diaminopimelate decarboxylase [Pectobacterium atrosepticum
           SCRI1043]
          Length = 420

 Score =  185 bits (469), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 59/392 (15%), Positives = 120/392 (30%), Gaps = 46/392 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +  D Q ++N +             +  A K  +   +   +++      S SL E+ 
Sbjct: 27  PVWAYDAQTIVNRITQLRQFD-----TIRFAQKACSNTHILRLMHEQGVKVDSVSLGEIE 81

Query: 65  LGH-EKF----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                 F          +     D      +S  +  +   +V  L +     Q     +
Sbjct: 82  RALIAGFVPGTDAHEIVFTADLLDRPTLQRVSELNIPVNAGSVDMLEQLGQ--QSPGHPV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G    D       I+     + G+  H       +
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWYGDLPLALAHIQRYQLKLVGIHMHIGSGVD-Y 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
                + + + ++       IE IS GGG+             + Y       R K  + 
Sbjct: 199 GHLEQVCEAMVQQVVELGQDIEAISAGGGLSIPYRHGEEAIDTEHYYGLWNAAREKIAAH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + + + +EPG  +V  +  L   V  I     ++ V+VD+     +   +        
Sbjct: 259 LGHPITLEIEPGRFLVAESGVLVAEVRAIKSMGSRHFVLVDAGFNDLMRPAMYGSYHHVS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                      +    +++ G  C +GD+F        E       ++GD + F D   Y
Sbjct: 319 LLSGDGRDISQSTLRDSVIAGPLCESGDVFTQQAGGGVETFSLPDAQVGDYLVFHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFS 358
             +  + +N   +    +          R  +
Sbjct: 379 GASMSSNYNSRPLLPEVLFENGEPRLIRRRQT 410


>gi|322613414|gb|EFY10355.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322621006|gb|EFY17864.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322624069|gb|EFY20903.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322628191|gb|EFY24980.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322633310|gb|EFY30052.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322636112|gb|EFY32820.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322639450|gb|EFY36138.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322643689|gb|EFY40241.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322648801|gb|EFY45248.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322653857|gb|EFY50183.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322657963|gb|EFY54231.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322664065|gb|EFY60264.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322667033|gb|EFY63205.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322673083|gb|EFY69190.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322677927|gb|EFY73990.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322681102|gb|EFY77135.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322685698|gb|EFY81692.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323194837|gb|EFZ80024.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323196588|gb|EFZ81736.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323204999|gb|EFZ89982.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323207800|gb|EFZ92746.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323212648|gb|EFZ97465.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323214869|gb|EFZ99617.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323222600|gb|EGA06965.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323225120|gb|EGA09372.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323230643|gb|EGA14761.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323235007|gb|EGA19093.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323239045|gb|EGA23095.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323244597|gb|EGA28603.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323247212|gb|EGA31178.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323253305|gb|EGA37134.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323256388|gb|EGA40124.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323262436|gb|EGA45992.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323267468|gb|EGA50952.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323269128|gb|EGA52583.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 420

 Score =  185 bits (469), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 56/397 (14%), Positives = 113/397 (28%), Gaps = 46/397 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D   +   +             +  A K  +   +   +        S SL E+ 
Sbjct: 27  PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRAQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D    A +S     +   +V  L +    +     ++
Sbjct: 82  RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G    D   +          + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAVMQKYRLKLVGIHMHIGSGVDYG 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223
                    + +        +E IS GGG+    +          Y       R +    
Sbjct: 200 HLEQVCGAMVRQVL-ECGQDVEAISAGGGLSIPYREGEEPVDTRHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES--- 278
             ++V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHAVKLEIEPGRFLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHRIS 318

Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     N      +V G  C +GD+F        E      V  GD +   D   Y
Sbjct: 319 ALAADGRALENGPWVETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
             +  + +N   +    + +        R  +  +  
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELL 415


>gi|292487152|ref|YP_003530022.1| diaminopimelate decarboxylase [Erwinia amylovora CFBP1430]
 gi|292900469|ref|YP_003539838.1| diaminopimelate decarboxylase [Erwinia amylovora ATCC 49946]
 gi|291200317|emb|CBJ47445.1| diaminopimelate decarboxylase [Erwinia amylovora ATCC 49946]
 gi|291552569|emb|CBA19614.1| Diaminopimelate decarboxylase [Erwinia amylovora CFBP1430]
          Length = 417

 Score =  185 bits (469), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 56/396 (14%), Positives = 121/396 (30%), Gaps = 44/396 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P++  D   +   +             +  A K  +   +   +        S SL E+ 
Sbjct: 27  PFWAYDASIIGERISQLQQFDV-----VRFAQKACSNIHILRLMRAAGVKVDSVSLGEIE 81

Query: 65  LGHEKF---GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGL 120
                    GG+   +     D    A ++     +   +V  L++    +      + L
Sbjct: 82  RALAAGYLTGGDEIVFTADLLDKPTLARVAELKIPVNAGSVDMLHQLGQVS--AGHPVWL 139

Query: 121 RINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSFLC 174
           R+NP   +      +     S+ G          + IE+    + G+  H       +  
Sbjct: 140 RVNPGFGHGHSQKTNTGGENSKHGIWYGDMALALEAIETYQLQLVGIHMHIGSGVD-YAH 198

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE-K 224
              +   +      F   ++ IS GGG+             + Y       R +      
Sbjct: 199 LEQVCDAMVNHIISFGQDLQAISAGGGLSVPYRFGEETIDTQHYFGLWDAARQRVERHLG 258

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA---- 279
           + V++ +EPG  +V  +  L + V  + +   ++ V+ D+     +   +          
Sbjct: 259 HPVKLEIEPGRFLVAESGVLISQVRAVKNMGSRHFVLADAGFNDLMRPSMYGSYHHISAI 318

Query: 280 ----TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNI 328
                         ++V G  C +GD+F        E      V++GD + F D   Y  
Sbjct: 319 AGDGRALDEVNTVESVVAGPLCESGDVFTQLEGGKVETRALPTVQVGDYLVFHDTGAYGA 378

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +  + +N   +    +       +  R  +  +   
Sbjct: 379 SMSSNYNSRPLLAEVLFENGQPRQIRRAQTVAELLA 414


>gi|113476062|ref|YP_722123.1| diaminopimelate decarboxylase [Trichodesmium erythraeum IMS101]
 gi|110167110|gb|ABG51650.1| diaminopimelate decarboxylase [Trichodesmium erythraeum IMS101]
          Length = 475

 Score =  185 bits (469), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 50/401 (12%), Positives = 108/401 (26%), Gaps = 38/401 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P Y+ID+  L           +        +L A K +++  +         G    S
Sbjct: 60  GSPLYIIDEYTLRTACRQYRDGLQKYYPGESLVLYASKAWSSLAVCALCASEGLGIDVVS 119

Query: 60  LYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKK 117
             E+    E     +   ++   K           D  I+ +   +L       ++   +
Sbjct: 120 GGELYTAIEAGVNPDKIYFHGNNKSLAELTFAIETDCIIVVDNWLELETLAGLKKQQKDQ 179

Query: 118 ------IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFH 164
                 I +R  P +              S+ G       +        E+  + G+  H
Sbjct: 180 VQNPTKIMVRFTPGIECHTHEYIRTGHLDSKFGFDPGQLNDVFAFISKEELLLLIGVHAH 239

Query: 165 NNCENKSFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEF 221
              +            ++ +           I+ I++GGG+     +       +     
Sbjct: 240 IGSQIFEVQPHQDLVTVMVDTMTTAMSHNLPIKEINIGGGLGIRYTETDDPPSIETWVHK 299

Query: 222 SEKYSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAH 268
                V +             EPG +I+        T+    E  +    +     +  +
Sbjct: 300 VSTAMVDVCKARQLPLPKLLCEPGRSIIGPACITAYTIGSQKEIPEIRTYISVDGGMSDN 359

Query: 269 VPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
                         A            + G+ C +GDI  +       + GD        
Sbjct: 360 PRPITYQSVYRAIVANRLSKPSTEVVTIAGKHCESGDILIKNATLPVTQPGDCFVVMATG 419

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            YN +  + +N +  P   +         ++  +Y D  + 
Sbjct: 420 AYNYSMASNYNRLPRPAAVLVAEKEVNIILQRETYQDLLSK 460


>gi|205353953|ref|YP_002227754.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205273734|emb|CAR38727.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
          Length = 420

 Score =  184 bits (468), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 57/398 (14%), Positives = 115/398 (28%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D   +   +             +  A K  +   +   +        S SL E+ 
Sbjct: 27  PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRAQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D    A +S     +   +V  L +    +     ++
Sbjct: 82  RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172
            LR+NPS  +      +     S+ G    D   +          + G+  H        
Sbjct: 140 WLRVNPSFGHGHSQKTNTGGENSKHGIWHSDLPAALAVMQKYRLKLVGIHMHIGSGVDYG 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223
                    + +        +E IS GGG+  + +          Y       R +    
Sbjct: 200 HLEQVCGAMVRQVL-ECGQDVEAISAGGGLSISYREGEEPVDTRHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES--- 278
             ++V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHAVKLEIEPGRFLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHRIS 318

Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     N      +V G  C +GD+F        E      V  GD +   D   Y
Sbjct: 319 ALAADGRALENGPWVETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    + +        R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 416


>gi|204928332|ref|ZP_03219532.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|204322654|gb|EDZ07851.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
          Length = 420

 Score =  184 bits (468), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 56/398 (14%), Positives = 114/398 (28%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D   +   +             +  A K  +   +   +        S SL E+ 
Sbjct: 27  PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRAQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D    A +S     +   +V  L +    +     ++
Sbjct: 82  RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G    D   +          + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAVMQKYRLKLVGIHMHIGSGVDYG 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223
                    + +        +E IS GGG+    +          Y       R +    
Sbjct: 200 HLEQVCGAMVRQVL-ECGQDVEAISAGGGLSIPYREGEEPVDTRHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES--- 278
             ++V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHAVKLEIEPGRFLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHRIS 318

Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                   + N      +V G  C +GD+F        E      V  GD +   D   Y
Sbjct: 319 ALAADGRAFENGPWVETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    + +        R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 416


>gi|269794309|ref|YP_003313764.1| diaminopimelate decarboxylase [Sanguibacter keddieii DSM 10542]
 gi|269096494|gb|ACZ20930.1| diaminopimelate decarboxylase [Sanguibacter keddieii DSM 10542]
          Length = 462

 Score =  184 bits (468), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 58/412 (14%), Positives = 121/412 (29%), Gaps = 50/412 (12%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA------GVKLLLALKCFAAWGMFDTLNQYMDGTT 56
            TP +++D+Q   +           A       V +  A K F +  +     +      
Sbjct: 47  GTPAFVLDEQHFRDRARLFRDSFSEAFGSVGAEVDVYYAGKSFLSVAVARWAREEGLRVD 106

Query: 57  SSSLYEVMLG-HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
           + +  E+ +       G     +      D    A+ +    I+ ++ +++++  + A+ 
Sbjct: 107 TCTGGELAVALRAGVPGAEIGLHGNNKSDDEITRAIEAEVGRIVVDSFAEIDRVAELARA 166

Query: 114 LHKKIG------LRINPSVSYSKFILADPNRPFSRLGEKCK--DKIESEIKNVN------ 159
             +  G      +R+   +               + G        + +    +       
Sbjct: 167 AGRDGGARVPVMVRVTTGIHAGGHEFISTAHEDQKFGVSLTGGQALAALQAVLEHPELEL 226

Query: 160 -GLMFHNNCENKSFL----CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF 214
            G   H   + +           ML    +        +  + LGGG         V   
Sbjct: 227 LGAHTHIGSQIQDAAAFEANARKMLALRAELQAATGYLLPELDLGGGYGIAYVPSDVPID 286

Query: 215 CQRLKEFSEK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENI------KN 257
              L                    +I +EPG ++V +TT    TV  +          + 
Sbjct: 287 VPALARDLADVVGSVCAELGTTVPRISIEPGRSVVGSTTVTLYTVGVVKPVTLEDGSVRT 346

Query: 258 LVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PV 312
            V VD  +  ++   L   E     A    +     A V G+ C +GDI          V
Sbjct: 347 YVSVDGGMSDNIRPALYEAEYTARLANRTGSAETVAARVVGKHCESGDIVISDIELPADV 406

Query: 313 KIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             GD ++      Y  +  + +N +  P +           +R  + +D  +
Sbjct: 407 ARGDLLAVPATGAYGRSMASNYNHVLRPPVVAVADGAARVIVRRETEDDLLS 458


>gi|312171258|emb|CBX79517.1| Diaminopimelate decarboxylase [Erwinia amylovora ATCC BAA-2158]
          Length = 417

 Score =  184 bits (468), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 56/396 (14%), Positives = 121/396 (30%), Gaps = 44/396 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P++  D   +   +             +  A K  +   +   +        S SL E+ 
Sbjct: 27  PFWAYDASIIGERISQLQQFDV-----VRFAQKACSNIHILRLMRAAGVKVDSVSLGEIE 81

Query: 65  LGHEKF---GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGL 120
                    GG+   +     D    A ++     +   +V  L++    +      + L
Sbjct: 82  RALAAGYLTGGDEIVFTADLLDKPTLARVAELKIPVNAGSVDMLHQLGQVS--AGHPVWL 139

Query: 121 RINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSFLC 174
           R+NP   +      +     S+ G          + IE+    + G+  H       +  
Sbjct: 140 RVNPGFGHGHSQKTNTGGENSKHGIWYGDMALALEAIETYQLQLVGIHMHIGSGVD-YAH 198

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE-K 224
              +   +      F   ++ IS GGG+             + Y       R +      
Sbjct: 199 LEQVCDAMVNHVISFGQDLQAISAGGGLSVPYRFGEETIDTQHYFGLWDAARQRVERHLG 258

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA---- 279
           + V++ +EPG  +V  +  L + V  + +   ++ V+ D+     +   +          
Sbjct: 259 HPVKLEIEPGRFLVAESGVLISQVRAVKNMGSRHFVLADAGFNDLMRPSMYGSYHHISAI 318

Query: 280 ----TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNI 328
                         ++V G  C +GD+F        E      V++GD + F D   Y  
Sbjct: 319 AGDGRALDEVNTVESVVAGPLCESGDVFTQLEGGKVETRALPAVQVGDYLVFHDTGAYGA 378

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +  + +N   +    +       +  R  +  +   
Sbjct: 379 SMSSNYNSRPLLAEVLFENGQPRQIRRAQTVAELLA 414


>gi|159029858|emb|CAO90912.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 467

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 50/410 (12%), Positives = 108/410 (26%), Gaps = 45/410 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAG-VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P Y++D+  L       L   +    G  +++ A K +    +   +     G    S
Sbjct: 56  GSPLYIVDEVTLRTACGQYLQGFQTHYPGESRVIYASKAWNCLAVSAVVASEGLGFDVVS 115

Query: 60  LYEVMLGHEKFGG------ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
             E+                 + +       E++  + +   II +   +L       + 
Sbjct: 116 AGEIHTVLTALDQSNKTDVPIYFHGNNKSIAELEYAIEHNCIIIVDNWLELENLVKLGEN 175

Query: 114 LHKKI---GLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMF 163
                    LR+ P +              S+ G             +   + N  GL  
Sbjct: 176 RPDTPIPVLLRLTPGIECHTHEYIRTGHLDSKFGFDPHQIEAVFDYVLAHPVLNCLGLHA 235

Query: 164 HNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRL-- 218
           H   +         +   +   F         +E +++GGG+     +       +    
Sbjct: 236 HIGSQIFERQPHQDLAAVLADWFKLGLERGLPLEQLNVGGGLGIRYLESDDPPSIEEWVQ 295

Query: 219 ---------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEA 267
                     +        +  EPG +++        TV +  E  +    +     +  
Sbjct: 296 AVSLAVAKACQERGIAYPLLIAEPGRSLIATACVTAYTVGNRKEIPEIRTYIAVDGGMSD 355

Query: 268 HVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323
           +              A            + G+ C +GDI  +         GD +     
Sbjct: 356 NPRPITYQSVYRAVVANKMSQECQELVTIAGKHCESGDILIKDIALPKTNPGDILVVLAT 415

Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN------NLS 367
             YN +  + +N +  P   +         +   +  D          LS
Sbjct: 416 GAYNYSMASNYNRLPRPAAVIVQNGEANLILERENLADLLRQDRLPNRLS 465


>gi|217967747|ref|YP_002353253.1| diaminopimelate decarboxylase [Dictyoglomus turgidum DSM 6724]
 gi|217336846|gb|ACK42639.1| diaminopimelate decarboxylase [Dictyoglomus turgidum DSM 6724]
          Length = 423

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 59/389 (15%), Positives = 125/389 (32%), Gaps = 28/389 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYI---RKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP Y++DK+ L+      +           K+L A+K      +      Y  G   S+
Sbjct: 31  GTPLYILDKETLIFQAQKYINSWKKYYKNKYKVLFAIKALPILEVIRIFKNYGLGALVST 90

Query: 60  LYEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK 116
             E+ +        E   ++   K  +            II +   +  K K    K   
Sbjct: 91  GGELYIALSANVPSEDIYFHGNAKTLKEIEYAIDQKVGAIIIDNFDEYEKIKYVLSKKDT 150

Query: 117 KI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNC 167
           K+   +RI P++  +        +  ++ G   +  +         +     G+  H   
Sbjct: 151 KVKVLVRIIPNIEVNTHKSIRTGQTDTKFGLPIEQALVLIEKINTEKNIIFKGIHSHIGS 210

Query: 168 ENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
           +      +  + + + + +         +E +S+GGG+             + L      
Sbjct: 211 QIFDISAYVKLSEVLSEVYKELNSKNITVEEMSIGGGLGVAYTKEDNPPDIEDLAREVSN 270

Query: 225 -------YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQ 276
                  ++ ++  EPG ++V         +    E  I+  V VD  +  ++   L   
Sbjct: 271 KFSETIGHNFKLICEPGRSLVGRAGITLYRIESRKELGIRKYVSVDGGMSDNIRPSLYGA 330

Query: 277 ESATIYPNTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
           + + +    G       + G+ C +GDI  +         GD +       YN +   W+
Sbjct: 331 KYSALIITKGDREEIFSIAGKHCESGDILIKDFSGLWPNPGDYLITFTTGAYNFSMYTWY 390

Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYY 363
           N    P + +         ++  +Y D  
Sbjct: 391 NATPRPAVVLVENGKDRIIVKRENYEDLL 419


>gi|148259756|ref|YP_001233883.1| diaminopimelate decarboxylase [Acidiphilium cryptum JF-5]
 gi|146401437|gb|ABQ29964.1| diaminopimelate decarboxylase [Acidiphilium cryptum JF-5]
          Length = 438

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 52/388 (13%), Positives = 111/388 (28%), Gaps = 27/388 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP ++     +   L          G    +  A+K      +   +     G   +S 
Sbjct: 44  GTPTWVYSAATIEGRLAALRAAFAGEGLAPAIRYAVKANDHLAILGLVRAGGAGADVTSA 103

Query: 61  YEVMLG-HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E               ++     +D    A+ +    +   +  +L      A    + 
Sbjct: 104 GEFARAEAAGIAPGAMVFSGVGKREDELRRALAAGIGQLNVESAEELEMISGIAAAMGVA 163

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-----IESEIKNVNGLMFHNNCENK 170
             + LR+NP V+          R   + G    D        + +  +  + F  +  ++
Sbjct: 164 APVALRVNPDVAAGGHDKISTGRKGDKFGIGFDDAGALYRRAAALPGIEAVGFSTHIGSQ 223

Query: 171 SFLCFSAMLKNIEK-----EFGHFITQIEWISLGGGIHFTDKD---YPVKDFCQRLKEFS 222
            F   +                     +  + LGGG      D   +P       ++   
Sbjct: 224 IFAPAAFEAAYRRVLGLIGALRGEGLAVRRLDLGGGFGIPYDDGTAFPFAAQAAMVRRVL 283

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATI 281
             + +++ +EPG  +V     L   V  +     +  V++D+ +   +   L       +
Sbjct: 284 GGHDLELIVEPGRWLVGPAGVLLARVTLVKRAGAERFVVLDAGMNDLIRPALYGARHGIV 343

Query: 282 -----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                     P  A V G  C + D FG       +  G  ++  D   Y     + +NG
Sbjct: 344 PVGAADAAGAPAPAEVVGPVCESSDRFGTHD-LPELAPGALVALLDAGAYGATMSSTYNG 402

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364
                  +          R  + ++ + 
Sbjct: 403 RPFAAQVMIADGAPQLIRRRQTLDELWR 430


>gi|16082554|ref|NP_394250.1| diaminopimelate decarboxylase [Thermoplasma acidophilum DSM 1728]
          Length = 402

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 70/382 (18%), Positives = 132/382 (34%), Gaps = 30/382 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP  +  + ++++N+       +N  V++L ++K      + + ++Q   G+ S+S  E
Sbjct: 28  GTPVIIYSRARIVSNIRRIREAYENR-VRMLYSVKANDNPRIIEIMHQESIGSDSASPME 86

Query: 63  VML-GHEKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGL 120
           +M+        E   Y+             +    I FNT +Q  K ++K     ++I  
Sbjct: 87  IMMSIFSGIPPEDILYSPNNASEYDLNFALDRGIAINFNTFTQYRKMREK----PERISF 142

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSF-- 172
           RINP     +F         ++ G      I +  K         G+       N+    
Sbjct: 143 RINPGFGMGEFAGTTTGGARTKFGIDPDAAILAYRKAREDGIREFGIHMMIGSNNRDHVK 202

Query: 173 --LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL-----KEFSEKY 225
               +S   +  ++         ++  +GGG+         +     L     KEF   +
Sbjct: 203 IAEAYSNFFRIADRIGREAGVSFQFADVGGGLGIPYVQGENELDIAALGSAVLKEFDRYH 262

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285
              + LEPG  +V +   +  TV D+          D  +  ++   L       I    
Sbjct: 263 FGDLVLEPGRYLVGDAGIIVGTVNDVHNG---FAGTDIGMNLNIRPALYGARHTIIPVGE 319

Query: 286 --GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343
                   V G+ C   D  G+  +   +  GDRI   D   Y  +  + +NG   P   
Sbjct: 320 RVEGEKITVTGQICENTDRIGDTAW--RLSEGDRIMVLDAGAYVYSMSSRYNGRPRPPEI 377

Query: 344 VKNVDGTIK-AIREFSYNDYYN 364
           +   DG      R   ++D+  
Sbjct: 378 MIMEDGKDVMIRRREDFSDFIA 399


>gi|254497522|ref|ZP_05110314.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein
           [Legionella drancourtii LLAP12]
 gi|254353239|gb|EET11982.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein
           [Legionella drancourtii LLAP12]
          Length = 853

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 55/365 (15%), Positives = 115/365 (31%), Gaps = 25/365 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P Y+             L   ++    L  A+K      +  TL +   G    S+ 
Sbjct: 494 LNSPCYVYHSPTQAARAQQLL-ALESID-TLFYAIKANPYPSILQTLEKEGVGFECVSIQ 551

Query: 62  EVMLGHEKFG---GETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKK 117
           E+    E F     +   +   +          N    I  +++  L  +       +++
Sbjct: 552 ELDRILELFPNIDKQRILFTPNFAPKTEYEYALNIGCFITIDSLYPLEHWPQL--FKNRE 609

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE------SEIKNVNGLMFHNNCENKS 171
           + +RI+P                S+ G    D  +          +V GL  H+     +
Sbjct: 610 VIVRIDPGAGAGHHKHVSTAGNESKFGITQNDLAQVIALTKKNNIHVIGLHAHSGSGILT 669

Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSEKYSV 227
              +     ++         ++++I+LGGG+   +K         +    L     +Y  
Sbjct: 670 PELW-QQTASMLASLTEHFPEVKYINLGGGLGIVEKPGQQPLDFANLDALLMAVKSRYPH 728

Query: 228 -QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATI---- 281
            +I+LEPG   V  +  +   V    E  K   I +++ + + +   L       +    
Sbjct: 729 LEIWLEPGRFFVAESGVILAKVTQCKEKGKVKFIGIETGMNSLIRPSLYGAYHEIVNLSR 788

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                   + + G  C +GD  G        + GD +   +   Y     + +N      
Sbjct: 789 LHEEKAGFSHIVGPICESGDTLGYDRLLPVTEEGDVLLIANAGAYGRCMSSHYNLRPPAE 848

Query: 342 IAVKN 346
             V +
Sbjct: 849 EIVLD 853


>gi|256395876|ref|YP_003117440.1| diaminopimelate decarboxylase [Catenulispora acidiphila DSM 44928]
 gi|256362102|gb|ACU75599.1| diaminopimelate decarboxylase [Catenulispora acidiphila DSM 44928]
          Length = 423

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 54/389 (13%), Positives = 114/389 (29%), Gaps = 32/389 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D           L         +    K F A  +   L +        S  E
Sbjct: 37  GTPLYVLDAADFRARCSAWLDAF--PNGDVHYGGKAFLAPAVVGWLAELGLCLDVCSGGE 94

Query: 63  VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +        E   ++   K       AV      I+ +++ ++ +    A +    + 
Sbjct: 95  LAVARVGGMPPERVVFHGNNKSVAEIRQAVAWGVGCIVLDSLHEVERVARAAAEAGTRQP 154

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
           + +R+ P +  +           ++ G         E  +  +        GL  H   +
Sbjct: 155 VMVRVKPGIDAATHASLATGGERTKFGMSMASGEAMEAVRRVLGESALEFIGLHSHIGSQ 214

Query: 169 NKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTD--KDYPVKDFCQR--LKE 220
                 F+   + +              +  + LGGG+       + P         +  
Sbjct: 215 IFDLDSFAEAARRMVGFLRDVERRQGIVVGRLDLGGGLGIPYLPGEKPASTPADLADVLH 274

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280
                 +++ +EPG AI   +T     V  +       V VD  +  +            
Sbjct: 275 AVVPAGIRLAVEPGRAIAGPSTVAVYEVGTVKGG---FVAVDGGMSDNPRPATYGAVYTA 331

Query: 281 IYPNTGP----YTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFN 335
           +  +           V G+ C +GD+  E       +  GD I+      Y  +  + +N
Sbjct: 332 VLASRHSAAPVEPVTVVGKHCESGDVLIEDIALPADLAPGDLIAIPCSGAYQRSTASNYN 391

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            +  P +   + +     +R  +  D   
Sbjct: 392 LVTRPPVVAVHENAAHAIVRRETEEDLLR 420


>gi|111225300|ref|YP_716094.1| diaminopimelate decarboxylase [Frankia alni ACN14a]
 gi|111152832|emb|CAJ64577.1| Diaminopimelate decarboxylase (DAP decarboxylase) [Frankia alni
           ACN14a]
          Length = 479

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 53/398 (13%), Positives = 120/398 (30%), Gaps = 38/398 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +++D+                +   +  A K F    +   +++        +  E
Sbjct: 69  GTPAFVLDEADFRARCAAWRRAF--SDCDVYYAGKAFLCRAVARWVDEEGLNLDVCTGGE 126

Query: 63  VMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F      ++   K       AV      I+ ++ +++++    A +    ++
Sbjct: 127 LAVARSVGFPAGRLLFHGNNKSVAELRAAVAYGVGRIVVDSFAEIDRLAAVAAEAGVRQR 186

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168
           + +R+ P V           +   + G               + +    + GL  H   +
Sbjct: 187 VLVRVTPGVEAHTHSYVSTGQEDQKFGFSLAGGAAAEAVERVLAAGSLELVGLHAHIGSQ 246

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F      M+  + +       ++  + LGGG+               + E    
Sbjct: 247 IFDTAGFGLAAHRMVGLLARVRDTHDLELPELDLGGGLGIAYTSEDAPLEVADVAERLTA 306

Query: 225 YSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPD 271
              +             +EPG A+V  TT     V  + E    +  V VD  +  ++  
Sbjct: 307 VVGKECAAAGLAVPRLGVEPGRAVVGPTTVTLYEVGTVKELPGLRTFVSVDGGMSDNIRT 366

Query: 272 YLLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGY 326
            L          +       +   + GR C +GD+          V+ GD ++      Y
Sbjct: 367 ALYDARYTARLVSRAGSAAAHVVTLVGRHCESGDVVAHDVPLPDDVRPGDLVAVPASGAY 426

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           + +  + +N +  P +           +R  +  D   
Sbjct: 427 HRSMASNYNHVTRPPVVAVRDGAARLIVRRETEEDLLR 464


>gi|238754529|ref|ZP_04615883.1| Diaminopimelate decarboxylase [Yersinia ruckeri ATCC 29473]
 gi|238707160|gb|EEP99523.1| Diaminopimelate decarboxylase [Yersinia ruckeri ATCC 29473]
          Length = 420

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 53/398 (13%), Positives = 115/398 (28%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +  D   +   ++   +        +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWAYDGDIIAERINQLRHFDV-----IRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGH-----EKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                            +     D      +      +   ++  L +  ++A      +
Sbjct: 82  RALLAGYQPGKEPAEIVFTADVLDQATLERVVELGIPVNAGSIDMLTQLGEQA--PGHPV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G    D       I      + G+  H       +
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHHDLAAAITEIGKYSLKLVGIHMHIGSGVD-Y 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----------KDYPVKDFCQRLKEFS 222
                +   + ++       I  IS GGG+                Y + +  ++     
Sbjct: 199 QHLEQVCDAMVRQVITLGQDISAISAGGGLSIPYQNDEDIIDTEHYYGLWNKARQQIAMH 258

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA-- 279
             + V + +EPG  +V  +  L   V  + +   ++ V+VD+     +   +        
Sbjct: 259 LGHPVSLEIEPGRFLVAESGVLVAQVRAVKNMGSRHYVLVDAGFNDLMRPAMYGSYHHIS 318

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIFG-------EFHFEKPVKIGDRISFEDVAGY 326
                     +     +++ G  C +GDIF        E        IGD + F D   Y
Sbjct: 319 VLPADGRDLSHEPLIDSVIAGPLCESGDIFTQQAGGGLETRTLPRPVIGDYLVFHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    +          R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFENGHPRLIRRRQTIEELVA 416


>gi|227825186|ref|ZP_03990018.1| conserved hypothetical protein [Acidaminococcus sp. D21]
 gi|226905685|gb|EEH91603.1| conserved hypothetical protein [Acidaminococcus sp. D21]
          Length = 421

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 54/393 (13%), Positives = 108/393 (27%), Gaps = 30/393 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+Y+ D++ +             N G K   A+K      +   L +   GT  SS  
Sbjct: 20  PTPFYIYDEKGIRETARKINQAFSWNKGYKEYFAVKATPNPYILKILQEEGCGTDCSSYT 79

Query: 62  EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++     F G    ++     D +          I  +  + ++  +           
Sbjct: 80  ELLMSKVCGFSGRDIMFSSNDTPDQDYRLAAELGAIINLDDFTMIDTVERLVGIPETICC 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCEN---- 169
                        + D     S+ G      +E+            G+            
Sbjct: 140 RYNPGGTFALGNDIMDNPG-DSKYGMTKAQLMEAFKILKKKGAKEFGIHAFLASNTVTNE 198

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
                   + +   +        + +I+L GG+    +     +    + E   +   ++
Sbjct: 199 YYPELARQLFELAVEVKHETGIAVSFINLSGGVGIPYRPDQTPNDILAIGEGVHRVYDEV 258

Query: 230 Y-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
           +            E G  +      L    +      K  V +D+     +   +     
Sbjct: 259 FGPEGMTDVRLMTEMGRFVTGPYGALIARAIHFKHIYKEYVGLDACAANLIRPAMYGAYH 318

Query: 279 ATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +   V G  C   D F        ++ GD +   D   +       +
Sbjct: 319 HITVLGKENAPCDHKYDVTGGLCENNDKFAVDRMLPEIEEGDYLFLHDAGAHCYAMGYNY 378

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           NG       +   DGT+K IR   +  DY+  L
Sbjct: 379 NGKLWCAELLLQEDGTVKMIRRAQTPKDYFATL 411


>gi|284032951|ref|YP_003382882.1| diaminopimelate decarboxylase [Kribbella flavida DSM 17836]
 gi|283812244|gb|ADB34083.1| diaminopimelate decarboxylase [Kribbella flavida DSM 17836]
          Length = 467

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 59/401 (14%), Positives = 121/401 (30%), Gaps = 42/401 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y++D+           + R    + +  A K F    +   + +        S  E
Sbjct: 62  GSPAYVLDEDD--FRTRARAFRRAFKDMDVYYAGKAFLCTTVVRWVMEEGLNLDICSGGE 119

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           + +            ++   K  +    A+ +    II +++ ++++    A  + +   
Sbjct: 120 LAVALRAGADPSRLGFHGNNKSEQELARALDAGVGRIIVDSLFEIDRLVALAAERGVVAP 179

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G         E      ++    + GL  H   +
Sbjct: 180 VMVRVTAGVEAHTHEYIATAHEDQKFGFSITSGAAFEAVAKVNQAAELRLLGLHSHIGSQ 239

Query: 169 NKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                 F      ++    +        +  + LGGG               +L     K
Sbjct: 240 IFDTSGFELAAKRLIALHARVSDELGVDMPELDLGGGFGIAYTTQDDPADPAQLATEMGK 299

Query: 225 YSVQIY-----------LEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDSSVEA 267
                            +EPG AIV        +V  + E        +  V VD  +  
Sbjct: 300 IVEHECRAYGVEVPRVSIEPGRAIVGPAVCTVYSVGTVKEVALDAGASRTYVSVDGGMSD 359

Query: 268 HVPDYLLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFED 322
           ++   L   + +    N      P  A V G+ C +GDI  +  F    V  GD ++   
Sbjct: 360 NIRTALYDADYSCTLANRSSDATPTLARVVGKHCESGDIVVKDEFLPSDVTPGDLVAVPG 419

Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
              Y  +  + +N +  P +       T   +R  + +D  
Sbjct: 420 TGAYCRSMASNYNHVPRPPVIAVKDGRTRVVVRRETEDDLL 460


>gi|309812195|ref|ZP_07705953.1| diaminopimelate decarboxylase [Dermacoccus sp. Ellin185]
 gi|308433882|gb|EFP57756.1| diaminopimelate decarboxylase [Dermacoccus sp. Ellin185]
          Length = 455

 Score =  183 bits (465), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 54/408 (13%), Positives = 113/408 (27%), Gaps = 46/408 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK------NAGVKLLLALKCFAAWGMFDTLNQYMDGTT 56
            TP Y+ID+  + +                     +  A K F +  +   + +      
Sbjct: 44  GTPAYVIDEADVRSRARAYREAFARAFAAIGTQADVYYAGKAFLSSHVAQWVTEEGLRLD 103

Query: 57  SSSLYEVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA-- 111
             S  E+ +       GE    +   K      DA+      I+ ++  ++++  D A  
Sbjct: 104 VCSGGELAIAKKAGVPGENIGMHGNNKGVAEIDDALAYGVGRIVVDSFEEIDRVADAAAR 163

Query: 112 QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLM 162
             +   + +R+   V               + G    D          +     ++ G  
Sbjct: 164 HHITAPVMIRVKLGVEAHTHEFIATAHEDQKFGFSAADGQIGDAVARVLARPELHLLGFH 223

Query: 163 FHNNCEN----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDF 214
            H   +           + ++    +       ++  + LGGG               + 
Sbjct: 224 SHIGSQIFESAGFKEAATRLIALQLQVAKEHGVELPELDLGGGFGIAYLPSDAPLDPAEM 283

Query: 215 CQRLKEFSEKYSVQ-------IYLEPGEAIVTNTTTLNTTVLDISENI------KNLVIV 261
             +L     +           + +EPG +IV         V  +          +  V V
Sbjct: 284 ATQLAGIVREACQNADVPVPRVSIEPGRSIVGPGGVTLYRVGTVKLVQASDDLVRTYVSV 343

Query: 262 DSSVEAHVPDYLLYQESATIYPNTGPY----TAMVCGRSCLAGDIFGEFH-FEKPVKIGD 316
           D  +  +    L   +      N G         V G+ C +GD+      F    + GD
Sbjct: 344 DGGMSDNARPALYQADYHAALANRGGSDELTPTRVVGKHCESGDVVVRDIDFPSDTRDGD 403

Query: 317 RISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            +       Y     + +N +  P +           +R  + +D   
Sbjct: 404 LVVVAATGAYCRALASQYNHVPRPPVIAVADGDARVLLRRETIDDLLA 451


>gi|312140420|ref|YP_004007756.1| diaminopimelate decarboxylase lysa [Rhodococcus equi 103S]
 gi|311889759|emb|CBH49076.1| diaminopimelate decarboxylase LysA [Rhodococcus equi 103S]
          Length = 447

 Score =  183 bits (464), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 55/396 (13%), Positives = 105/396 (26%), Gaps = 35/396 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+  + +              ++  A K      + D +          S  E
Sbjct: 50  GTPTYVLDEDDVRHRCRAYRTAFPE--AEIAYAAKALTTRAVADWVTSEGLSLDVCSEGE 107

Query: 63  VMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           + +             +  A    E+   +      I        +      +  +++ +
Sbjct: 108 LAIARSAGVAPSRIILHGNAKTATELRTAVGVGVGRIVVDSHNEIRLLASLARRRQRVLV 167

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCENKS 171
           R  P +               + G            +  +E     + GL  H   +   
Sbjct: 168 RATPDIDIHGHPAVTTGVDDQKFGFPINGGHLDAAVRLVLEQPSLELVGLHCHLGSQITD 227

Query: 172 FLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
              F      M+  +E+        +  ++LGGG          +    RL    +    
Sbjct: 228 VELFASAVDRMIGRMEQIRRDHGVILTNLNLGGGHAVPYLPGDPQIDLTRLAGVLDDALD 287

Query: 228 QIY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL 274
           +             LEPG  IV         V+ I         V     +  +    L 
Sbjct: 288 EACARNRFPRPGITLEPGRGIVARGGVTLYRVVSIKTGSGGRTFVAVDGGMSDNPRVALY 347

Query: 275 YQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNIN 329
                    N  P        V GR C AGD+          +  GD ++      Y+  
Sbjct: 348 GARYDVAVANRHPTGAHMPVTVVGRHCEAGDVLARDVSLPCDLHPGDVLAVPCTGAYHHC 407

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
             + +N +  P +         + IR  +  D  + 
Sbjct: 408 LASTYNSVGRPPMVAVRGGSARELIRRETAADLLSR 443


>gi|238758899|ref|ZP_04620071.1| Diaminopimelate decarboxylase [Yersinia aldovae ATCC 35236]
 gi|238702856|gb|EEP95401.1| Diaminopimelate decarboxylase [Yersinia aldovae ATCC 35236]
          Length = 421

 Score =  183 bits (464), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 57/400 (14%), Positives = 118/400 (29%), Gaps = 49/400 (12%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +  D   +   ++            +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWAYDGDVIAERINQLRQFDV-----IRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGH-EKF----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                 F          +     D    + ++  D  +   ++  L++      K    +
Sbjct: 82  RAICAGFQPGQEPAEIVFTADLLDEATLSRVTALDIPVNAGSIDMLDQLGQ--TKRGHPV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172
            LRINP   +      +     S+ G   KD  ++          + G+  H       +
Sbjct: 140 WLRINPGFGHGHSQKTNTGGENSKHGIWYKDLPQAIEKVQQYGLTLIGIHMHIGSGVD-Y 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP------------VKDFCQRLKE 220
                +   + ++       I  IS GGG+    +                 D  +R+  
Sbjct: 199 QHLEQVCDAMVQQVIALGQDISAISAGGGLSIPYQFGDADKIDTQHYYGLWNDARERIAA 258

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA 279
               + V + +EPG  +V  +  L   V  + +   ++ V+VD+     +   L      
Sbjct: 259 HLG-HPVSLEIEPGRFLVAESGVLIAQVRAVKNMGNRHYVLVDAGFNDLMRPALYGSYHH 317

Query: 280 --------TIYPNTGPYTAMVCGRSCLAGDIFG-------EFHFEKPVKIGDRISFEDVA 324
                       +      ++ G  C +GD+F        E        IGD + F D  
Sbjct: 318 ISLLPADGRDLNSDPLIDTVIAGPLCESGDVFTQEAGGALETRQLPNAHIGDYLVFHDTG 377

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            Y  +  + +N   +    +          R  +  +   
Sbjct: 378 AYGASMSSNYNSRPLLPEVLFERGVPRLIRRRQTIEELIA 417


>gi|117927837|ref|YP_872388.1| diaminopimelate decarboxylase [Acidothermus cellulolyticus 11B]
 gi|117648300|gb|ABK52402.1| diaminopimelate decarboxylase [Acidothermus cellulolyticus 11B]
          Length = 500

 Score =  183 bits (464), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 56/397 (14%), Positives = 116/397 (29%), Gaps = 42/397 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ID+    +         +  G  +  A K     G+   +     G    +  E
Sbjct: 62  GTPCYVIDETDFRSRCRRWRTAFE--GATVYYAAKALLTLGIARWVADEQLGLDVCTGDE 119

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +            ++   K       A+ +    I+ +  ++L +      +L     
Sbjct: 120 LAVALRAGVDPARIVFHGNNKSDAELRTALQAGVGRIVIDAFAELRRLAALGAELGVRPD 179

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G             + + +    + GL  H   +
Sbjct: 180 VLIRVTVGVEAHTHEFIATAHEDQKFGFSLAGGQALAAVTEALGATSLRLVGLHSHIGSQ 239

Query: 169 NKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVK----DFCQRLKE 220
                 F      +             ++  ++LGGG+              +F  +++ 
Sbjct: 240 IFDTAGFEVAAHRVVGLLRTIRDQHGIELPELNLGGGVGVAYTADDDPVDVAEFAAQVRA 299

Query: 221 FSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI------KNLVIVDSSVEA 267
             E+          ++ +EPG AI          V  +          +  V VD  +  
Sbjct: 300 IVERECAAAGLAVPRLAVEPGRAIAGPPVLTVYRVGTVKPVDLGGGFVRTYVSVDGGMSD 359

Query: 268 HVPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFE-KPVKIGDRISFED 322
           ++   L          N      P  A V G+ C AGDI     F    ++ GD ++   
Sbjct: 360 NIRAALYDAAYTCALANRRAAGEPILARVVGKHCEAGDIVVRDTFVSADIQDGDLLAVPV 419

Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
              Y  +  + +N +  P +           +R  + 
Sbjct: 420 TGAYCRSLASNYNYLGRPPLVAVRDGRARLLVRRETI 456


>gi|257053752|ref|YP_003131585.1| diaminopimelate decarboxylase [Halorhabdus utahensis DSM 12940]
 gi|256692515|gb|ACV12852.1| diaminopimelate decarboxylase [Halorhabdus utahensis DSM 12940]
          Length = 419

 Score =  183 bits (464), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 54/382 (14%), Positives = 111/382 (29%), Gaps = 28/382 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP Y+++  ++  N             +++ A K      +   L         ++  E
Sbjct: 26  ETPLYVLETGRVQANYRRFDAAF--PDAEVMYAAKAHTGRAVLSALLDVGADIECAARGE 83

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD------TIIFNTVSQLNKFKDKAQKLH 115
           +    E      T  Y                       TI        ++ +  A+   
Sbjct: 84  LQRAIEAGADPNTLQYTAVNPPAADLDYAVELADEYPGLTITGGARDTFDRLQ--ARGYD 141

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-----KIESEIKNVNGLMFHNNCE-- 168
            ++ +RINP +              ++ G   +          E  ++ GL  H      
Sbjct: 142 GRVAIRINPGIGTGHHEKV-ATGKDAKFGIPAERVPDLAADLRERFDLVGLHAHVGSGVL 200

Query: 169 NKSFLCFSAMLKNIEKEFGHFIT-QIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
                  +  L  +           +E++  GGG             ++   + ++E   
Sbjct: 201 TGEVDEHARALGKVADLAREVGDGDLEFVDFGGGFGVPYREDEPPLDIEVVAETVREAVG 260

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATI- 281
             +  +  EPG  +V +   +   V  + E  +  V+ VD+S+   +   +         
Sbjct: 261 DLNATMKFEPGRYVVADAELILARVNTVKEAPETTVVGVDASLSTLIRPAMFDSYHPIRN 320

Query: 282 --YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
              P+       V G  C + D+F         +  D ++  +   Y     N F+    
Sbjct: 321 VSAPDRADEAVSVGGPCCTSADVFATDRPIARPEREDILAIGNAGAYGYELANNFHSQPR 380

Query: 340 PTIAVKNVDGTIKAIREFSYND 361
           P       DG     R  +  D
Sbjct: 381 PAEVAIEGDGARIVRRRETMAD 402


>gi|310766546|gb|ADP11496.1| diaminopimelate decarboxylase [Erwinia sp. Ejp617]
          Length = 417

 Score =  183 bits (464), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 56/396 (14%), Positives = 122/396 (30%), Gaps = 44/396 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +  D   +   +             +  A K  +   +   +        S SL E+ 
Sbjct: 27  PLWAYDASIISERISQLQQFDV-----VRFAQKACSNVHILRLMRAAGVKVDSVSLGEIE 81

Query: 65  LGHEKF---GGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
                    GG+   +     D    A ++     +   +V  L++    +      + L
Sbjct: 82  RALAAGYQAGGDEIVFTADLLDEATLARVAGLKVPVNAGSVDMLHQLGQVS--AGHPVWL 139

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKSFLC 174
           R+NP   +      +     S+ G   +D       ++     + G+  H       +  
Sbjct: 140 RVNPGFGHGHSQKTNTGGENSKHGIWHEDMALALEAMQKYQLKLVGIHMHIGSGVD-YAH 198

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE-K 224
              +   +  +  +F   ++ IS GGG+               Y       R +      
Sbjct: 199 LEQVCDAMVNQVVNFGQDLQAISAGGGLSIPYHFGEETIDTRHYFGLWDAARQRVERHLG 258

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA---- 279
           + V++ +EPG  +V  +  L + V  + +   ++ V+VD+     +   +          
Sbjct: 259 HPVKLEIEPGRFLVAESGVLVSQVRAVKNMGSRHFVLVDAGFNDLMRPSMYGSYHHISAI 318

Query: 280 ----TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNI 328
                         ++V G  C +GD+F        E      V++GD + F D   Y  
Sbjct: 319 AGDGRTLDEMNSVESVVAGPLCESGDVFTQLEGGKVETRALPAVQVGDYLVFHDTGAYGA 378

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +  + +N   +    +       +  R  +  +   
Sbjct: 379 SMSSNYNSRPLLPEVLFENGQPRQIRRAQTVAELLA 414


>gi|259909546|ref|YP_002649902.1| diaminopimelate decarboxylase [Erwinia pyrifoliae Ep1/96]
 gi|224965168|emb|CAX56700.1| Diaminopimelate decarboxylase [Erwinia pyrifoliae Ep1/96]
          Length = 417

 Score =  183 bits (464), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 56/396 (14%), Positives = 121/396 (30%), Gaps = 44/396 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +  D   +   +             +  A K  +   +   +        S SL E+ 
Sbjct: 27  PLWAYDASIISERISQLQQFDV-----VRFAQKACSNVHILRLMRAAGVKVDSVSLGEIE 81

Query: 65  LGHEKF---GGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
                    GG+   +     D    A +      +   +V  L++    +      + L
Sbjct: 82  RALAAGYQAGGDEIVFTADLLDEATLARVAELKVPVNAGSVDMLHQLGQVS--AGHPVWL 139

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKSFLC 174
           R+NP   +      +     S+ G   +D       ++     + G+  H       +  
Sbjct: 140 RVNPGFGHGHSQKTNTGGENSKHGIWHEDMALALEAMQKYQLKLVGIHMHIGSGVD-YAH 198

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE-K 224
              +   +  +  +F   ++ IS GGG+               Y       R +      
Sbjct: 199 LEQVCDAMVNQVVNFGQDLQAISAGGGLSVPYHFGEETIDTRHYFGLWDAARQRVERHLG 258

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA---- 279
           + V++ +EPG  +V  +  L + V  + +   ++ V+VD+     +   +          
Sbjct: 259 HPVKLEIEPGRYLVAESGVLVSQVRAVKNMGSRHFVLVDAGFNDLMRPSMYGSYHHISAI 318

Query: 280 ----TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNI 328
                         ++V G  C +GD+F        E      V++GD + F D   Y  
Sbjct: 319 AGDGRALDEMNSVESVVAGPLCESGDVFTQLEGGKVETRALPAVQVGDYLVFHDTGAYGA 378

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +  + +N   +    +       +  R  +  +   
Sbjct: 379 SMSSNYNSRPLLPEVLFENGQPRQIRRAQTVAELLA 414


>gi|213964601|ref|ZP_03392801.1| diaminopimelate decarboxylase [Corynebacterium amycolatum SK46]
 gi|213952794|gb|EEB64176.1| diaminopimelate decarboxylase [Corynebacterium amycolatum SK46]
          Length = 472

 Score =  183 bits (464), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 60/406 (14%), Positives = 123/406 (30%), Gaps = 45/406 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +++D+Q   +   +     + A   +  A K F +  +   + +       +S  E
Sbjct: 61  GTPVFVVDEQDFRSRCRSMAKAFRGAE-NVHYASKAFLSKTIARWVMEEGLHLDVASGNE 119

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F  +   ++   K       A+ +    I+ ++ S+L +    A +    + 
Sbjct: 120 MAIALAAGFPAKDMTFHGNNKSTAELRDAISAGVGKIVLDSRSELRRLSQVAAEAGVVQD 179

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168
           + +R+ P V               + G                E E   + GL  H   +
Sbjct: 180 VLVRVKPGVEAHTHEFIATAHEDQKFGFSLASGSALEASSLVEEDENLRLVGLHCHIGSQ 239

Query: 169 N----KSFLCFSAMLKNIEKEFGHFITQIE----WISLGGGIHFTD----KDYPVKDFCQ 216
                   L    +   +EK      T+I      + LGGG         +   V     
Sbjct: 240 IVDSDGFILAAERVFSLVEKLVERHGTEISEHFNTLDLGGGFGIAYTAGEQPLDVAPLAD 299

Query: 217 RLKEFSEKYSVQIYL-------EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS----- 264
            +    +K + +I +       EPG AIV  +      V  + +   +  +         
Sbjct: 300 EILTAVDKLAQRIGIAAPTVAVEPGRAIVGPSMVTVYEVGTLKDVTIDDGMTRRYVSVDG 359

Query: 265 -VEAHVPDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRI 318
            +  ++   L          N           V G+ C +GDI          +  GD  
Sbjct: 360 GMSDNIRPALYGSNYDGRVVNREVSGSRIPTRVVGKHCESGDILINDANYPSDIVEGDLF 419

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +      Y     + +N +  P +         + +R  +  D  +
Sbjct: 420 ALAATGAYCYAMASRYNMLTRPPVVSVCDGQVTQILRRETVQDLLS 465


>gi|168186354|ref|ZP_02620989.1| diaminopimelate decarboxylase [Clostridium botulinum C str. Eklund]
 gi|169295706|gb|EDS77839.1| diaminopimelate decarboxylase [Clostridium botulinum C str. Eklund]
          Length = 469

 Score =  183 bits (463), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 82/415 (19%), Positives = 149/415 (35%), Gaps = 55/415 (13%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           TP+Y+  ++++L N+D      KN +  K+  A K  +   +   + +      ++S+YE
Sbjct: 52  TPFYVYSEKEILRNIDEIKKAFKNHSNTKIFYASKACSVMKILKIVKESGICVEANSIYE 111

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKK-- 117
           V    E  F GE   +N   K           D   I  ++  +LN  ++   +L K   
Sbjct: 112 VKKCLEIGFKGEQIVFNGVVKKKYELEFAIRNDLYLINVDSFFELNIIEEITNRLKKNAN 171

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCENK 170
           + +RI P+VS             ++ G   +D        I  +   + GL  H   +  
Sbjct: 172 VCVRIEPNVSSPTHPGLITAFH-AKSGIDLEDAEKMCGRIINMKYVKLKGLHMHVGDQVP 230

Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDY-------------PVKD 213
           +   F    + + KE          + + I++GGGI    K                  D
Sbjct: 231 TSEPFRKATEVMVKEAARLERVLNFKFDLINVGGGIPVPYKYEKENAQEDYLYGGINSYD 290

Query: 214 FCQRLKEFSEKYS--VQIYLEPGEAIVTNTTTLNTTV---------------LDISENIK 256
           F   +     K+   ++I +EPG  +V+++  L T+V                D+ +   
Sbjct: 291 FASAIINEIHKWRKDIEICIEPGRKVVSSSAVLLTSVSCEKTKTNYDENNNIQDLVDWKF 350

Query: 257 NLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFH------FEK 310
                    ++   D+  Y  +A+           V G  C  GD F +           
Sbjct: 351 VDAGYSILSDSLHFDWYFYLLNASKTNLEYNNWFKVAGPLCDGGDYFHQGVAGEFFALPS 410

Query: 311 PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364
             ++GD ++F D   Y I  +  +N      + + N +G  + IR   SY D   
Sbjct: 411 NTEVGDILAFLDAGAYTIESQTVYNNRPRTAVVLINKEGKDELIRREDSYEDMVK 465


>gi|13124048|sp|O69203|DCDA_ACTPA RecName: Full=Diaminopimelate decarboxylase; Short=DAP
           decarboxylase
 gi|3056878|gb|AAC13998.1| diaminopimelate decarboxylase [Actinosynnema pretiosum subsp.
           auranticum]
          Length = 437

 Score =  183 bits (463), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 56/390 (14%), Positives = 118/390 (30%), Gaps = 30/390 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP  ++D+  +        +       +++ A K      ++  +          S  E
Sbjct: 49  GTPCQVLDEGTVRA--RARAFREALPEAEVVFAGKALPCREVYRWVADEGLSLDVCSAGE 106

Query: 63  VMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + +     F  E    +      +    A+      ++ ++  ++ +    A+     + 
Sbjct: 107 LAIARSVGFPAERVLLHGNVKTPEDLKAALGYGVGRVVVDSFDEIEQLGALAEGPQD-VL 165

Query: 120 LRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCENK 170
           +R+ P V               + G         E     +E     + GL  H   + +
Sbjct: 166 VRVTPGVDPRTHRAVATGVEDQKFGFSLAGGDALEAVLRVVEQPSLRLVGLHCHVGSQVR 225

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYS 226
               +    + +         +IE + LGGG          ++ +  F  R++       
Sbjct: 226 HVAVYEEAARRVVGLIASCGVRIEQLDLGGGFAVPYLPGEGEFDLGGFAHRVRVALSHEC 285

Query: 227 -------VQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQES 278
                   ++ +EPG A+V         V  +   ++   V VD  +  +    L     
Sbjct: 286 ALRRVPVPRLSIEPGRAVVARAGVTLYRVAAVKRGVRRVFVAVDGGMSDNPRPALYGSRY 345

Query: 279 ATIYPNTGPY--TAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFN 335
           A      G       V GR C AGD+  E       V+ GD ++      Y+    + +N
Sbjct: 346 AVRLVRRGGRRAPVTVVGRHCEAGDVLAEDVPLPEDVRAGDLLAVPVTGAYHHALASNYN 405

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            +  P +           +R  +  D    
Sbjct: 406 AVGRPPVVGVRDGVARVLVRRETEEDLLRR 435


>gi|325675970|ref|ZP_08155653.1| diaminopimelate decarboxylase [Rhodococcus equi ATCC 33707]
 gi|325553208|gb|EGD22887.1| diaminopimelate decarboxylase [Rhodococcus equi ATCC 33707]
          Length = 447

 Score =  183 bits (463), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 58/397 (14%), Positives = 112/397 (28%), Gaps = 37/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+  + +           +  ++  A K      + D +          S  E
Sbjct: 50  GTPTYVLDEDDVRHRCRAYRTAFPES--EIAYAAKALTTRAVADWVTSEGLSLDVCSEGE 107

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + +             +   K       AV      I+ ++ +++      A++  +++ 
Sbjct: 108 LAIARSAGVDPSRIILHGNAKTATELRTAVGVGVGRIVVDSHTEIRLLASLARR-RQRVL 166

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCENK 170
           +R  P +               + G            +  +E     + GL  H   +  
Sbjct: 167 VRATPDIDIHGHPAVTTGVDDQKFGFPINGGHLDAAVRLVLEQPSLELVGLHCHLGSQIT 226

Query: 171 SFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-- 224
               F      M+  +E+        +  ++LGGG          +    RL    +   
Sbjct: 227 DVELFASAVERMIGRMEQIRRDHGVILTNLNLGGGHAVPYLPGDPQIDLTRLAGVLDDAL 286

Query: 225 ---------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYL 273
                        I LEPG  IV         V+ I         V     +  +    L
Sbjct: 287 DEACARNRFPRPDITLEPGRGIVARAGVTLYRVVSIKTGSGGRTFVAVDGGMSDNPRVAL 346

Query: 274 LYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNI 328
                     N  P        V GR C AGD+          +  GD ++      Y+ 
Sbjct: 347 YGARYDVAVANRHPTGAHMPVTVVGRHCEAGDVLARDVSLPCDLHPGDVLAVPCTGAYHH 406

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              + +N +  P +         + IR  +  D  + 
Sbjct: 407 CLASTYNSVGRPPMVAVRGGCARELIRRETAADLLSR 443


>gi|225428410|ref|XP_002283716.1| PREDICTED: hypothetical protein isoform 2 [Vitis vinifera]
          Length = 423

 Score =  183 bits (463), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 52/376 (13%), Positives = 99/376 (26%), Gaps = 67/376 (17%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+YL  K ++  N +      +     +  A+K      + + L +   G    S  E+ 
Sbjct: 94  PFYLYSKPQITRNFEAYKEALEGLRSIIGYAIKANNNLKILEHLRELGCGAVLVSGNELR 153

Query: 65  LG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGL 120
           L     F      +N       ++         +  ++   L+     A+       + L
Sbjct: 154 LALRAGFDPTRCIFNGNGKLLEDLVLAAQEGVFVNVDSEFDLDNIISAARIAGKKVNVLL 213

Query: 121 RINPSVSYSKFILADPNRPFSRLGE------KCKDKIESEIKNVN--GLMFHNNCENKSF 172
           RINP V              S+ G          D +++    +   G   H        
Sbjct: 214 RINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKV 273

Query: 173 LCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
             F      +            +I ++++GGG+                           
Sbjct: 274 DIFRDAAVLMVNYIDEIRAQGFEISYLNIGGGLGIDY----------------------- 310

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT 289
                                       L      ++ H+         A I       T
Sbjct: 311 ----------------------YHAGAVLPTPRDLIDTHIELVSPPPSDAQIS------T 342

Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349
             V G  C + D  G+         G  +   D   Y ++  + +N    P       DG
Sbjct: 343 FDVVGPVCESADFLGKDRELPTPPRGAGLVVHDAGAYCMSMASTYNLKMRPPEYWVEDDG 402

Query: 350 TIKAIRE-FSYNDYYN 364
           ++  IR   ++ D+  
Sbjct: 403 SMSKIRHGETFEDHVR 418


>gi|28198325|ref|NP_778639.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein
           [Xylella fastidiosa Temecula1]
 gi|182680964|ref|YP_001829124.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein
           [Xylella fastidiosa M23]
 gi|28056395|gb|AAO28288.1| diaminopimelate decarboxylase [Xylella fastidiosa Temecula1]
 gi|182631074|gb|ACB91850.1| aspartate kinase [Xylella fastidiosa M23]
 gi|307579432|gb|ADN63401.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein
           [Xylella fastidiosa subsp. fastidiosa GB514]
          Length = 868

 Score =  183 bits (463), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 52/362 (14%), Positives = 102/362 (28%), Gaps = 24/362 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y+     +         +          A+K      +  TL +   G    SL E+ 
Sbjct: 510 PCYVYHLPTVRERARQLNAVAAVDQC--YYAIKANPHPAILRTLIEEGFGLECVSLGELR 567

Query: 65  LGHEKFG---GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
              E           +  ++               +     +  +   +  +  + + LR
Sbjct: 568 HVFEVVPHLVPSRVLFTPSFASRVEYEQAFLLGVNVTLDNVEALRLWPEVFR-ERTLWLR 626

Query: 122 INPSVSYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175
           I+                 S+ G      ++  D  ++    V GL  H     +S   +
Sbjct: 627 IDLGYGDGHHEKVTTGGKTSKFGLSVTRIDEFIDVAKTLNITVTGLHAHLGSGVESGNHW 686

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF-----CQRLKEFSEKYSVQIY 230
           S M   +          +  + +GGG+    +                +  +     Q+ 
Sbjct: 687 SRMYDELAGFASRIG-SVSTLDIGGGLPIPYRPDDEPFDVGAWGASLAEVKALHPKFQLV 745

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIYPNTGPYT 289
           +EPG  +V     L T V  + E      V +++ +   +   L               T
Sbjct: 746 IEPGRFLVAEAGVLLTRVTQVIEKDDILRVGLEAGMHTLIRPALYDAWHGVENLTRLDET 805

Query: 290 ----AMVCGRSCLAGDIFGEFHFEKPVKI-GDRISFEDVAGYNINRKNWFNGINMPTIAV 344
                 V G  C + D+FG           GD +   D   Y  +  + +N   +P   V
Sbjct: 806 PHVLCDVVGPICESSDVFGRRRHLPAATASGDLMLIADAGAYGFSMASTYNLRGLPAEVV 865

Query: 345 KN 346
            +
Sbjct: 866 LD 867


>gi|304396707|ref|ZP_07378587.1| diaminopimelate decarboxylase [Pantoea sp. aB]
 gi|304355503|gb|EFM19870.1| diaminopimelate decarboxylase [Pantoea sp. aB]
          Length = 418

 Score =  182 bits (462), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 56/396 (14%), Positives = 110/396 (27%), Gaps = 44/396 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P++  D Q +   +             +  A K  +   +   +        S SL E+ 
Sbjct: 27  PFWAYDAQIIQARIAQLQ-AFDV----VRFAQKACSNTHILRLMRAAGVKVDSVSLGEIE 81

Query: 65  LGHEKF---GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-AQKLHKKIGL 120
                    GG+   +     D      ++     +      ++      A      + L
Sbjct: 82  RALAAGYQPGGDEIVFTADLFDQPTLERVT--ALKVPVNAGSIDMLHQLGAVSPGHAVWL 139

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174
           R+NP   +      +     S+ G    D       I+     + G+  H          
Sbjct: 140 RVNPGFGHGHSQKTNTGGENSKHGIWHGDLAEALATIKQYGLQLVGIHMHIGSGVDYAHL 199

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE-K 224
                  +E         +  IS GGG+               Y       R +      
Sbjct: 200 QQVCDAMVELVMAS-GQDLSAISAGGGLSIPYRYGEEAIDTHHYFGLWDAARQRIAQHLG 258

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
           ++V++ +EPG  +V     L + V  +     ++ V+VD+     +   +          
Sbjct: 259 HAVKLEIEPGRFLVAEAGVLVSQVRAVKSMGSRHFVLVDAGFSDLMRPSMYGSYHHISLM 318

Query: 284 NTGPY--------TAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNI 328
                          +V G  C +GD+F        E       K+GD + F D   Y  
Sbjct: 319 AGDERAIDEQQTIDTVVAGPLCESGDVFTQLEGGMVEPRAIPAAKVGDYLVFHDTGAYGA 378

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +  + +N   +    +       +  R  +      
Sbjct: 379 SMSSNYNSRPLIPEVLFEQGQPREIRRAQTIESLLA 414


>gi|256833011|ref|YP_003161738.1| diaminopimelate decarboxylase [Jonesia denitrificans DSM 20603]
 gi|256686542|gb|ACV09435.1| diaminopimelate decarboxylase [Jonesia denitrificans DSM 20603]
          Length = 459

 Score =  182 bits (462), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 56/412 (13%), Positives = 122/412 (29%), Gaps = 50/412 (12%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA------GVKLLLALKCFAAWGMFDTLNQYMDGTT 56
            TP + +D+              + A       V +  A K F +  +    ++      
Sbjct: 44  GTPAFFLDESDFRERAQLFRDAFRAAFSPLGVDVDVYYAGKAFLSIAVARWAHEEGLRID 103

Query: 57  SSSLYEVMLG-HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
           ++S+ E+ +       G+    +      +    A+      I+ ++  +++     A+ 
Sbjct: 104 TASMGEMAVALRAGIPGDHMGLHGNNKSDEERRRAITHRVGRIVIDSPGEIDDIVRVARA 163

Query: 114 L------HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNV 158
           L         + +R+   +           R   + G               ++    ++
Sbjct: 164 LGRTAADPVPVMVRVTTGIHAGGHDFIATAREDQKFGLSLAGGQALATLTAVLDHPELHL 223

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDY----P 210
            G   H   + +    F    + +              +  + LGGG             
Sbjct: 224 LGAHAHIGSQIQDPTAFEVNARKMLTLRADLEHATGYLMPELDLGGGYGIAYTPEETPID 283

Query: 211 VKDFCQRLKEFSEK-------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN------ 257
           V +  QRL     +          +I +EPG +I+         V  +   + +      
Sbjct: 284 VPNLAQRLATTLSEVAAELGTTIPRISIEPGRSIIGPAMVTCYRVGVVKPVVTDEGVTRL 343

Query: 258 LVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PV 312
            V VD  +  ++   L   +     A    +     A V G+ C +GDI          +
Sbjct: 344 YVSVDGGMSDNIRPALYGAQYTARLANRTGSEQGALARVVGKHCESGDIIIPDVVLPADI 403

Query: 313 KIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             GD +       YN +  + +N +  P +       T   +R  + +D   
Sbjct: 404 GPGDLLVVAATGAYNRSMASNYNNLLKPPVIAVREGHTTVLVRRETEDDLLA 455


>gi|257389205|ref|YP_003178978.1| diaminopimelate decarboxylase [Halomicrobium mukohataei DSM 12286]
 gi|257171512|gb|ACV49271.1| diaminopimelate decarboxylase [Halomicrobium mukohataei DSM 12286]
          Length = 413

 Score =  182 bits (462), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 56/385 (14%), Positives = 116/385 (30%), Gaps = 28/385 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D  ++  N              ++ A K      +   L +       ++  E
Sbjct: 27  GTPLYVLDVDRVAANYRRFAAAF--PDAHVMYAAKAHTGRAVLSGLLEAGADIECAAAGE 84

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCD------TIIFNTVSQLNKFKDKAQKLH 115
           +           T  Y              +        TI        ++ +D+     
Sbjct: 85  LQRAIDAGADPNTLQYTAVNPPGGDLDYAVDLADEHPGLTITGGAEDTFDRLEDR--GYD 142

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-----IESEIKNVNGLMFHNNCENK 170
            ++ +RINP +              ++ G    +         +  ++ GL  H      
Sbjct: 143 GRVAIRINPGIGTGHHEKV-ATGKDAKFGIPYDEVPALADDLRDRFDLVGLHAHAGSGVL 201

Query: 171 S--FLCFSAMLKNIEKEFGHFIT-QIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSE 223
                     +  + +         +E++  GGG     ++      ++   +R++E   
Sbjct: 202 REDLDDHCRAIAKVAELAREVGDSDLEFVDFGGGFGVPYREETEPLDMQAVGERVREAVG 261

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATI- 281
             S +I LEPG  +V +   + TTV  + E     V+ VD+S+   +   +         
Sbjct: 262 DLSARIKLEPGRYVVADAELILTTVNTVKETPATTVVGVDASLATLIRPAMFDSYHPIRN 321

Query: 282 --YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
              P+  P+   + G  C + D+F         +  D ++  +   Y     N F+    
Sbjct: 322 VSAPDRDPHPVSIGGPCCTSADVFATDRPIARPERTDLLAIGNAGAYGYELANQFHSQPR 381

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
           P              R  +  D   
Sbjct: 382 PAEVAIEDGDERVVRRRETMADVVR 406


>gi|289829292|ref|ZP_06546904.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
          Length = 420

 Score =  182 bits (462), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 56/398 (14%), Positives = 112/398 (28%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D   +   +             +  A K  +   +   +        S SL E+ 
Sbjct: 27  PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRAQDVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D    A +S     +   +V  L +    +     ++
Sbjct: 82  RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G    D   +          + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAVMQKYRLKLVGIHMHIGSGVDYG 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223
                    + +        +E IS GGG+               Y       R +    
Sbjct: 200 HLEQVCGAMVRQVL-ECGQDVEAISAGGGLSIPYHEGEEPVDTRHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES--- 278
             ++V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHAVKLEIEPGRYLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHRIS 318

Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     N      +V G  C +GD+F        E      V  GD +   D   Y
Sbjct: 319 ALAADGRALENGPWVETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    + +        R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 416


>gi|294815814|ref|ZP_06774457.1| Diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC
           27064]
 gi|294328413|gb|EFG10056.1| Diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC
           27064]
          Length = 454

 Score =  182 bits (462), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 59/397 (14%), Positives = 125/397 (31%), Gaps = 36/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+ +         + R      ++ A K F +  + D + Q   G    S  E
Sbjct: 56  GTPVYVLDEAE--VRARARAWRRALPDADVVYAAKAFLSRAVVDWMEQEGLGLDVCSAGE 113

Query: 63  VMLGHE-KFGGETHA-YNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI- 118
           + L     F  E    +  A    ++  A+      I+ ++  ++ +   + Q    +  
Sbjct: 114 LELAASRGFPAERIVLHGNAKSPQDLRTALRLGVGRIVIDSEGEIARLAAQVQGPEPQQV 173

Query: 119 GLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCEN 169
            +R+ P +               + G         E     +      + GL  H   + 
Sbjct: 174 MVRVLPGIEAGGHRKIRTGGEGQKFGLSLANGDAEEAVARVLGQPGLELVGLHCHLGSQI 233

Query: 170 KSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQ 216
            S   +      ++  + +        +  + LGGG                Y  +   +
Sbjct: 234 ASPEPYARAVRRLVALLARLRDRHGITLPELDLGGGFAVAYLPGDPAPAPAAYGRRIQDE 293

Query: 217 RLKEFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYL 273
            ++  +E       L  EPG +I+         VL +  +  +    VD  +  +    L
Sbjct: 294 LIRSCAESDYPAPRLTVEPGRSIMAPAGVALYRVLAVKRSGGRVFAAVDGGMSDNPRPAL 353

Query: 274 LYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNI 328
                                 V GR C AGD+  E       ++ GD ++      Y++
Sbjct: 354 YGARYTVRRVGRVSAAPMRATTVVGRHCEAGDVLAESVELPEDLRPGDVLAVPGAGAYHV 413

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           +  + +N    P +       +   +R  ++ D+ + 
Sbjct: 414 SMASGYNMTGRPPVVAVAEGRSRVLLRRETFEDHRSR 450


>gi|254389440|ref|ZP_05004667.1| diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC
           27064]
 gi|326444158|ref|ZP_08218892.1| diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC
           27064]
 gi|197703154|gb|EDY48966.1| diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC
           27064]
          Length = 446

 Score =  182 bits (462), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 59/397 (14%), Positives = 125/397 (31%), Gaps = 36/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+ +         + R      ++ A K F +  + D + Q   G    S  E
Sbjct: 48  GTPVYVLDEAE--VRARARAWRRALPDADVVYAAKAFLSRAVVDWMEQEGLGLDVCSAGE 105

Query: 63  VMLGHE-KFGGETHA-YNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI- 118
           + L     F  E    +  A    ++  A+      I+ ++  ++ +   + Q    +  
Sbjct: 106 LELAASRGFPAERIVLHGNAKSPQDLRTALRLGVGRIVIDSEGEIARLAAQVQGPEPQQV 165

Query: 119 GLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCEN 169
            +R+ P +               + G         E     +      + GL  H   + 
Sbjct: 166 MVRVLPGIEAGGHRKIRTGGEGQKFGLSLANGDAEEAVARVLGQPGLELVGLHCHLGSQI 225

Query: 170 KSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQ 216
            S   +      ++  + +        +  + LGGG                Y  +   +
Sbjct: 226 ASPEPYARAVRRLVALLARLRDRHGITLPELDLGGGFAVAYLPGDPAPAPAAYGRRIQDE 285

Query: 217 RLKEFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYL 273
            ++  +E       L  EPG +I+         VL +  +  +    VD  +  +    L
Sbjct: 286 LIRSCAESDYPAPRLTVEPGRSIMAPAGVALYRVLAVKRSGGRVFAAVDGGMSDNPRPAL 345

Query: 274 LYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNI 328
                                 V GR C AGD+  E       ++ GD ++      Y++
Sbjct: 346 YGARYTVRRVGRVSAAPMRATTVVGRHCEAGDVLAESVELPEDLRPGDVLAVPGAGAYHV 405

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           +  + +N    P +       +   +R  ++ D+ + 
Sbjct: 406 SMASGYNMTGRPPVVAVAEGRSRVLLRRETFEDHRSR 442


>gi|149197863|ref|ZP_01874912.1| diaminopimelate decarboxylase [Lentisphaera araneosa HTCC2155]
 gi|149139084|gb|EDM27488.1| diaminopimelate decarboxylase [Lentisphaera araneosa HTCC2155]
          Length = 418

 Score =  182 bits (462), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 60/392 (15%), Positives = 120/392 (30%), Gaps = 31/392 (7%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+Y+  ++ +       L I    G+    A+K      +   +        +SS YEV
Sbjct: 21  TPFYVYSQKVIEKQCQAILAIPAPFGLTARYAIKANPNTAILKVIENTGFHFDASSEYEV 80

Query: 64  MLGH-EKFGGETHAYNVAYKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +         +           E   ++          ++ QL ++  KA     +I +R
Sbjct: 81  IRCLKAGIAADKIQLTSQEMSSEHLELIIKEGVRFNACSLEQLKRYAAKA-PKGSEISIR 139

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDK----IESEIKNVNGLMFHNNCENKSFLCFSA 177
           INP +        +   P S  G   +        ++   +     H++  + +      
Sbjct: 140 INPGLGSGSSRKTNVGGPSSSFGIWFEQVDEVKRFADGCGLRITRLHSHIGSGADPAVWE 199

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK----------YSV 227
              ++       + ++  ++LGGG         V    + + +                 
Sbjct: 200 RAASLTLAVARQLPEVTVLNLGGGFKVARHSDEVSTSIEAVGQTVADVLKKEAEETGRKY 259

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV---DSSVEAHVPDYLLYQESAT--IY 282
            + LEPG  +V N  +L  +V DI+            ++ ++      L         + 
Sbjct: 260 HLELEPGTFLVANAGSLVCSVDDITNTGDEGYTFLKINAGMDMLTRPALYAAHHPCLPLS 319

Query: 283 PNTGPYTAMVCGRSCLAGDIFG-------EFHFEKPVKIGDRISFEDVAGYNINRK-NWF 334
            ++     ++ G  C +GD+F        E        IGD I  E    Y  +     +
Sbjct: 320 DSSEKVEYVITGHCCESGDLFSVSADDTLEPRSLPKTNIGDTIIIEGAGAYCASMSLKNY 379

Query: 335 NGINMPTIAVKNVDGTIKAIR-EFSYNDYYNN 365
           N        + + D     IR          N
Sbjct: 380 NSFPQVAELILDKDDQAHIIRKREEMEQILAN 411


>gi|285017830|ref|YP_003375541.1| bifunctional diaminopimelate decarboxylase/aspartate kinase
           [Xanthomonas albilineans GPE PC73]
 gi|283473048|emb|CBA15553.1| putative bifunctional diaminopimelate decarboxylase/aspartate
           kinase protein [Xanthomonas albilineans]
          Length = 850

 Score =  182 bits (462), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 53/365 (14%), Positives = 105/365 (28%), Gaps = 26/365 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+     L         I      +   A+K      +  TL +   G    S  E
Sbjct: 487 GTPRYVYHLPTLRERARALKAIAAVD--QRYYAIKANTHPAILQTLVEEGFGLECVSHGE 544

Query: 63  VMLGHEKFG---GETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           +    E           +  ++    E +A  +   T+  + V  L ++   A    + +
Sbjct: 545 LRRVFETLPELSPRRVLFTPSFAPRAEYEAAFALGVTVTLDNVEALQRWP--ALFRGRSL 602

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKC------KDKIESEIKNVNGLMFHNNCENKSF 172
            LRI+           +     S+ G          +   +    + G+  H     ++ 
Sbjct: 603 WLRIDLGHGDGHHQKVNTGGKRSKFGLSATRVDEFVEAARALDIRIVGVHAHLGSGVETS 662

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-----V 227
             +  +   +          IE I +GGG+                 +   +        
Sbjct: 663 EHWRRICDELAGFARRIG-SIEVIDIGGGLPIPYSADDEPFDLDAWAQGLAEVKQVHPGF 721

Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATI----Y 282
           ++ +EPG  +V     L +     I ++    V +D+ +   +   L       +     
Sbjct: 722 RLAIEPGRYLVAECGVLLSRATQVIEKDGIRRVGLDAGMNTLIRPALYDAWHDVVNLSRL 781

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                    V G  C + D+FG            D +   D   Y     + +N   +P 
Sbjct: 782 EREADTVFDVVGPVCESSDVFGHRRRLPAETAPDDVMLIADAGAYGYVMASTYNQRELPR 841

Query: 342 IAVKN 346
             V +
Sbjct: 842 EEVID 846


>gi|71892045|ref|YP_277775.1| diaminopimelate decarboxylase [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
 gi|71796151|gb|AAZ40902.1| diaminopimelate decarboxylase [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
          Length = 429

 Score =  182 bits (461), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 58/399 (14%), Positives = 125/399 (31%), Gaps = 47/399 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D   ++N +             +  A K  +   +   ++ Y     + SL E+ 
Sbjct: 27  PVWVYDASIIINRITQLKQFDV-----IRYAQKSCSNIHILRLMHNYEVKVDAVSLGEIE 81

Query: 65  LGH-EKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
                 F       E        ++  +  +      +   ++  L +    A     KI
Sbjct: 82  RALLAGFKAGKQSNEIVFTADILEEETLLRISELNIVVNAGSIDMLAQLG--ACSPGHKI 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172
            LRINP   +      +     S+ G   +D       I      + GL  H     + +
Sbjct: 140 WLRINPGFGHGHNQKTNTGGENSKHGIWHEDIPIALSYIHHYDLQLIGLHMHIGSGVR-Y 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-------- 224
              S +   + ++   +   ++ IS GGG+    +   +                     
Sbjct: 199 DHLSKVCNAMVQQILKYKIDVDVISAGGGLTIPYEHNDMVLDVNHYFRLWNNARKYISQY 258

Query: 225 --YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATI 281
             ++V + +EPG  +V  +  L T +  + +   ++ V++D+     +   +        
Sbjct: 259 LNHTVTLEIEPGRFLVAESGILITQIRAVKNMGNRHFVLIDAGYNDLMRPVMYGSYHHIS 318

Query: 282 YPNTGPYTAM--------VCGRSCLAGDIFGEF--------HFEKPVKIGDRISFEDVAG 325
                  + +        V G  C +GDIF +               K+GD + F D   
Sbjct: 319 LVPGDNRSVILETLCDTVVGGPLCESGDIFTQNMNGTILARKLPCSAKVGDYLIFHDTGA 378

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y  +  + +N   +    +       +  R+    D + 
Sbjct: 379 YGASMSSNYNTRPLLPEVLFENGQIRQIRRKQKLEDLFM 417


>gi|220913102|ref|YP_002488411.1| diaminopimelate decarboxylase [Arthrobacter chlorophenolicus A6]
 gi|219859980|gb|ACL40322.1| diaminopimelate decarboxylase [Arthrobacter chlorophenolicus A6]
          Length = 490

 Score =  182 bits (461), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 64/430 (14%), Positives = 125/430 (29%), Gaps = 67/430 (15%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA------GVKLLLALKCFAAWGMFDTLNQYMDGTT 56
            TP +++ +               +A      GV +  A K F    +   + +      
Sbjct: 57  GTPLFVMSENDFRARARAFSDAFNDAFADICGGVDVYYAGKSFLCTAVVRWVEEEGLRLD 116

Query: 57  SSSLYEVMLG-HEKFGG-ETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
           ++S  E+ +       G +   +     D E   A+      I+ +++ +L +    AQ 
Sbjct: 117 TASGGELAVAYRAGIPGADVALHGNNKSDGEIHRALDMGLGRIVVDSLDELARVGAIAQG 176

Query: 114 L--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------------DKIESEIK 156
                K+ LR+ P V               + G                       +   
Sbjct: 177 RGEQAKVMLRLTPGVHAHTHEFIATAHEDQKFGLSMAADTTDEAGISASEEAVAAATAHP 236

Query: 157 NVN--GLMFHNNCENKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYP 210
            +   GL  H   +      F+   + + +        +   +  + LGGG         
Sbjct: 237 GIELLGLHCHIGSQIFEPDGFALAAEKLLRFLAAMQEKYSITLPELDLGGGYGIAYTPED 296

Query: 211 VKDFCQ--------RLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVL---------- 249
                          ++    +    + +I +EPG AIV +TT     V           
Sbjct: 297 TPRPAAEIANAMAAVVRSTCAELGIDAPRISIEPGRAIVGSTTFTLYEVGTLKTVRVDAP 356

Query: 250 ---------DISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296
                    D     +  V VD  +  +    L   + + +      N  P  + V G+ 
Sbjct: 357 GTSGDGDAGDNVTYPRRYVSVDGGMSDNARPVLYDADYSAVLASRTSNAAPQLSRVVGKH 416

Query: 297 CLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           C +GDI     +    V  GD ++      Y     + +N +  P +       +   +R
Sbjct: 417 CESGDIVVRDVYLPEDVAAGDLLAVPGTGAYCWALSSNYNYLARPGVVAVRDGSSRLIVR 476

Query: 356 EFSYNDYYNN 365
             +  D  N 
Sbjct: 477 GETEEDLLNR 486


>gi|71899469|ref|ZP_00681627.1| Aspartate kinase [Xylella fastidiosa Ann-1]
 gi|71730782|gb|EAO32855.1| Aspartate kinase [Xylella fastidiosa Ann-1]
          Length = 868

 Score =  182 bits (461), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 51/362 (14%), Positives = 99/362 (27%), Gaps = 24/362 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y+     +         +      +   A+K      +  TL +   G    SL E+ 
Sbjct: 510 PCYVYHLPTVRERARQLNSVAAVD--QRYYAIKANPHPAILRTLIEEGFGLECVSLGELR 567

Query: 65  LGHEKFG---GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                          +  ++               +     +  +   +  +  + + LR
Sbjct: 568 HVFAVVPHLVPSRVLFTPSFASRVEYEQAFLLGVNVTLDNVEALRLWPEVFR-DRTLWLR 626

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSFLCF 175
           I+                 S+ G   K   E           V GL  H     +    +
Sbjct: 627 IDLGYGDGHHEKVTTGGKTSKFGLSVKRIDEFIDVAKTLNITVTGLHAHLGSGVERGNHW 686

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF-----CQRLKEFSEKYSVQIY 230
           S M   +          +  + +GGG+    +                +  +     Q+ 
Sbjct: 687 SRMYDELAGFASRIG-SVSTLDIGGGLPIPYRPDDEPFDVGAWGASLAEVKALHPKFQLV 745

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIYPNTGPYT 289
           +EPG  +V     L T V  + E      V +++ +   +   L          +    T
Sbjct: 746 IEPGRFLVAEAGVLLTRVTQVIEKDDILRVGLEAGMHTLIRPALYDAWHGVENLSRLDET 805

Query: 290 ----AMVCGRSCLAGDIFGEFHFEKPVKI-GDRISFEDVAGYNINRKNWFNGINMPTIAV 344
                 V G  C + D+FG           GD +   D   Y  +  + +N   +P   V
Sbjct: 806 PHVLCDVVGPICESSDVFGRRRRLPAATASGDLMLIADAGAYGFSMASTYNLRGLPAEVV 865

Query: 345 KN 346
            +
Sbjct: 866 LD 867


>gi|71276047|ref|ZP_00652328.1| Aspartate kinase [Xylella fastidiosa Dixon]
 gi|170729669|ref|YP_001775102.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein
           [Xylella fastidiosa M12]
 gi|71163130|gb|EAO12851.1| Aspartate kinase [Xylella fastidiosa Dixon]
 gi|167964462|gb|ACA11472.1| aspartate kinase / diaminopimelate decarboxylase [Xylella
           fastidiosa M12]
          Length = 868

 Score =  182 bits (461), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 51/362 (14%), Positives = 99/362 (27%), Gaps = 24/362 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y+     +         +      +   A+K      +  TL +   G    SL E+ 
Sbjct: 510 PCYVYHLPTVRERARQLNSVAAVD--QRYYAIKANPHPAILRTLIEEGFGLECVSLGELR 567

Query: 65  LGHEKFG---GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                          +  ++               +     +  +   +  +  + + LR
Sbjct: 568 HVFAVVPHLVPSRVLFTPSFASRVEYEQAFLLGVNVTLDNVEALRLWPEVFR-DRTLWLR 626

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSFLCF 175
           I+                 S+ G   K   E           V GL  H     +    +
Sbjct: 627 IDLGYGDGHHEKVTTGGKTSKFGLSVKRIDEFIDVAKTLNITVTGLHAHLGSGVERGNHW 686

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF-----CQRLKEFSEKYSVQIY 230
           S M   +          +  + +GGG+    +                +  +     Q+ 
Sbjct: 687 SRMYDELAGFASRIG-SVSTLDIGGGLPIPYRPDDEPFDVGAWGASLAEVKALHPKFQLV 745

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIYPNTGPYT 289
           +EPG  +V     L T V  + E      V +++ +   +   L          +    T
Sbjct: 746 IEPGRFLVAEAGVLLTRVTQVIEKDDILRVGLEAGMHTLIRPALYDAWHGVENLSRLDET 805

Query: 290 ----AMVCGRSCLAGDIFGEFHFEKPVKI-GDRISFEDVAGYNINRKNWFNGINMPTIAV 344
                 V G  C + D+FG           GD +   D   Y  +  + +N   +P   V
Sbjct: 806 PHVLCDVVGPICESSDVFGRRRRLPAATASGDLMLIADAGAYGFSMASTYNLRGLPAEVV 865

Query: 345 KN 346
            +
Sbjct: 866 LD 867


>gi|10640067|emb|CAC11919.1| diaminopimelate decarboxylase related protein [Thermoplasma
           acidophilum]
          Length = 436

 Score =  181 bits (460), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 70/382 (18%), Positives = 132/382 (34%), Gaps = 30/382 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP  +  + ++++N+       +N  V++L ++K      + + ++Q   G+ S+S  E
Sbjct: 62  GTPVIIYSRARIVSNIRRIREAYENR-VRMLYSVKANDNPRIIEIMHQESIGSDSASPME 120

Query: 63  VML-GHEKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGL 120
           +M+        E   Y+             +    I FNT +Q  K ++K     ++I  
Sbjct: 121 IMMSIFSGIPPEDILYSPNNASEYDLNFALDRGIAINFNTFTQYRKMREK----PERISF 176

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSF-- 172
           RINP     +F         ++ G      I +  K         G+       N+    
Sbjct: 177 RINPGFGMGEFAGTTTGGARTKFGIDPDAAILAYRKAREDGIREFGIHMMIGSNNRDHVK 236

Query: 173 --LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL-----KEFSEKY 225
               +S   +  ++         ++  +GGG+         +     L     KEF   +
Sbjct: 237 IAEAYSNFFRIADRIGREAGVSFQFADVGGGLGIPYVQGENELDIAALGSAVLKEFDRYH 296

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285
              + LEPG  +V +   +  TV D+          D  +  ++   L       I    
Sbjct: 297 FGDLVLEPGRYLVGDAGIIVGTVNDVHNG---FAGTDIGMNLNIRPALYGARHTIIPVGE 353

Query: 286 --GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343
                   V G+ C   D  G+  +   +  GDRI   D   Y  +  + +NG   P   
Sbjct: 354 RVEGEKITVTGQICENTDRIGDTAW--RLSEGDRIMVLDAGAYVYSMSSRYNGRPRPPEI 411

Query: 344 VKNVDGTIK-AIREFSYNDYYN 364
           +   DG      R   ++D+  
Sbjct: 412 MIMEDGKDVMIRRREDFSDFIA 433


>gi|308813676|ref|XP_003084144.1| diaminopimelate decarboxylase (ISS) [Ostreococcus tauri]
 gi|116056027|emb|CAL58560.1| diaminopimelate decarboxylase (ISS) [Ostreococcus tauri]
          Length = 518

 Score =  181 bits (460), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 60/401 (14%), Positives = 115/401 (28%), Gaps = 42/401 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D   L      A       G+ +  A+K      +     +      +SS YE
Sbjct: 116 GTPTYVYDAPTLEARAAVAKGFPNAYGLTVRYAMKASPNAAILKIFKKAGLHVDASSGYE 175

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                   F G+  + +          ++     I   ++ QL +F   A     +IG+R
Sbjct: 176 CERAMRAGFAGDEISLSTQELPSFFPELVEKGVRINACSLDQLERFG--AAFPGGEIGVR 233

Query: 122 INPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSFLCF 175
            NP +        +   P S  G         K+ +      V  +  H    +   +  
Sbjct: 234 FNPGLGSGGTGKTNVGGPSSSFGIWYELLPRVKEIVAEYNLKVVRVHTHIGSGSDPAVWQ 293

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY----- 230
                 +  +       +  ++LGGG       Y        +    ++   +       
Sbjct: 294 KVSG--MSLDLCREFPDVTTLNLGGGYKVGRMSYEKSTDLAVVGVPVKEAFEKFAEETGR 351

Query: 231 -----LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV----PDYLLYQESATI 281
                +EPG  ++ N+  + T V D              ++  +       L   +   +
Sbjct: 352 KLKLEIEPGTFLLANSCAVVTRVQDKVTTGTAEGHTFLKLDCGMTEVLRPSLYGSQHPLV 411

Query: 282 YP------NTGPYTAMVCGRSCLAGDIF---------GEFHFEKPVKIGDRISFEDVAGY 326
                          +V G  C +GD+                  V IGD I  E    Y
Sbjct: 412 SVTKDGTLPETQAEYVVVGHCCESGDLMTPAPDEPETISERTMGEVNIGDFIVIEGSGAY 471

Query: 327 NINRKN-WFNGINMPTIAVKNVDGTIK-AIREFSYNDYYNN 365
                +  +N        ++   G +    R+ + +   +N
Sbjct: 472 CAGMASKNYNSFPEAPEVMRRGAGDMVCIRRKQTLDQILSN 512


>gi|296393110|ref|YP_003657994.1| diaminopimelate decarboxylase [Segniliparus rotundus DSM 44985]
 gi|296180257|gb|ADG97163.1| diaminopimelate decarboxylase [Segniliparus rotundus DSM 44985]
          Length = 451

 Score =  181 bits (460), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 57/401 (14%), Positives = 121/401 (30%), Gaps = 41/401 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P +++DK                    +  A K F +  +   L+Q        S  E
Sbjct: 46  GSPLFVVDKDDFHTRCRRWAEALGPRN--VHYASKAFLSGQLAHWLDQEGLALDVCSGGE 103

Query: 63  VMLG-HEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F       +   K       AV    + ++ ++  ++ +      +L   + 
Sbjct: 104 LAIALRGGFPPNRMTLHGNNKSVAELRRAVDVGVEAVVLDSFEEIERLDAACAELGREQD 163

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G         E  +  +      + G   H   +
Sbjct: 164 VLVRLTVGVQAHTHEAIATAHEDQKFGFSVASGAAAEAVRRVLARPRLRLIGFHSHIGSQ 223

Query: 169 NKSFLCFSAMLKNIEKEFGH------FITQIEWISLGGGIHFTDK----DYPVKDFCQRL 218
                 F    + +             I  +  + LGGG+    +         +  + +
Sbjct: 224 ILELDGFRLAAQRVAAFADEAVRGFGPIPTLRVLDLGGGLGVAYQLGERPPEPAELAEAV 283

Query: 219 KEFSEKYSVQIYL----EPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDSSVEAH 268
           ++  E+Y     L    EPG +I+ + T    TV  + +       I+  V VD  +  +
Sbjct: 284 RKEVEQYPAAARLSVAVEPGRSIMASGTVTLYTVGTVKDVVLEGGAIRKYVSVDGGMSDN 343

Query: 269 VPDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDV 323
           +   L          +      P  + V G+ C  GDI          V  GD ++    
Sbjct: 344 IRPALYGAHYDARLVSRAGAAEPAQSRVVGKHCETGDIVVRDCLLPEDVAPGDIVAVAST 403

Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             Y  +  + +N +  P +       +   +R  +  D  +
Sbjct: 404 GAYCYSLSSRYNALCRPAVVAVEDGRSWLMLRRETEADLLS 444


>gi|88855309|ref|ZP_01129973.1| diaminopimelate decarboxylase [marine actinobacterium PHSC20C1]
 gi|88815216|gb|EAR25074.1| diaminopimelate decarboxylase [marine actinobacterium PHSC20C1]
          Length = 467

 Score =  181 bits (460), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 66/405 (16%), Positives = 124/405 (30%), Gaps = 42/405 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK------NAGVKLLLALKCFAAWGMFDTLNQYMDGTT 56
            TP Y+ID+   +                  + VK+  A K F    +   +        
Sbjct: 52  GTPVYVIDEADAIARATEIKSAFDSEFARIGSSVKVYYAGKAFLCTEVARWMTAAGLNID 111

Query: 57  SSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQK 113
            +S  E+ +            ++   K               I+ ++V ++ +  D A +
Sbjct: 112 VASAGEMAVALAAGVDASRLGFHGNNKSLSEIDRAVRAGIGPIVIDSVVEIGRVADAATR 171

Query: 114 L--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFH 164
               +++ LRIN  V  S        R   + G    +              +  G+  H
Sbjct: 172 HGRTQRVRLRINSGVHASTHEYLATAREDQKFGIPLAEAESVVAQIRSHGSLDFVGIHSH 231

Query: 165 NNCENKSFLCFSAMLKNIEKEFGH--FITQIEWISLGGGIHFTDKDYPVKDFCQRL---- 218
              +      F+   + + +       +  +  ++LGGG                L    
Sbjct: 232 IGSQIFDTAGFAEAAQRLLELHARLAALGPVPELNLGGGFGIAYTSADEALPVAELAASL 291

Query: 219 -------KEFSEKYSVQIYLEPGEAIVTNTTTLNTT------VLDISENIKNLVIVDSSV 265
                      E     I +EPG +I+  +TT   T      VL   E ++  V VD  +
Sbjct: 292 ASIVQAECARLEIDVPLIAIEPGRSIIGPSTTTLYTAGTIKDVLVDGEAVRKYVSVDGGM 351

Query: 266 EAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISF 320
             ++   L   +     A       P    + G+ C AGDI     +    ++ GD I+ 
Sbjct: 352 SDNLRTALYGADYSARIANRDSQADPALVRIAGKHCEAGDIIVRAEYLPGDIEPGDIIAV 411

Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
                Y     N +N +  P +           +R  + +D  + 
Sbjct: 412 PATGAYGWAMSNNYNYLARPPVVAVRDGHARIIVRGETEDDLLSR 456


>gi|54294698|ref|YP_127113.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein
           [Legionella pneumophila str. Lens]
 gi|53754530|emb|CAH16014.1| hypothetical protein lpl1775 [Legionella pneumophila str. Lens]
          Length = 859

 Score =  181 bits (460), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 58/365 (15%), Positives = 107/365 (29%), Gaps = 25/365 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I +P Y+         +         +   L  A+K      +  TL +   G    S+ 
Sbjct: 500 IHSPCYVYHSPT--QAIRARQLSALESIDSLFYAVKANPFPSILKTLEKEGIGFECVSIQ 557

Query: 62  EVMLGHEKFG---GETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKK 117
           E+ L  + F     E   +   +               +  +++  L  + +     +++
Sbjct: 558 ELELVLKLFPNIKKERILFTPNFAPKSEYEFALQTGCYVTIDSLYPLENWPEL--FKNRE 615

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKS 171
           + +RI+P                S+ G    D        +S    V GL  H+     S
Sbjct: 616 VIVRIDPGTGAGHHKHVSTGGNESKFGITQNDISKILSLTKSNHIKVIGLHAHSGSGILS 675

Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI-- 229
              +      +         ++  I+LGGG+   +K          L         Q   
Sbjct: 676 TDLW-QQTAVMLASLTDQFPEVRSINLGGGLGIVEKPGQHPIDFAALDAQLMAVKSQYPG 734

Query: 230 ---YLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATI---- 281
              +LEPG   V  +  +   V    E  K   I +++ + + +   L       +    
Sbjct: 735 LAIWLEPGRFFVAESGVILAKVTQCKEKGKVKFIGIETGMNSLIRPSLYGAYHEIVNLTR 794

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                   A + G  C +GD  G        K GD I   +   Y     + +N      
Sbjct: 795 LHEEKAGFAHIVGPICESGDTLGYDRLLPVTKEGDVILIANTGAYGHCMSSHYNLRPPAQ 854

Query: 342 IAVKN 346
             V  
Sbjct: 855 EIVLE 859


>gi|291618675|ref|YP_003521417.1| LysA [Pantoea ananatis LMG 20103]
 gi|291153705|gb|ADD78289.1| LysA [Pantoea ananatis LMG 20103]
          Length = 425

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 60/396 (15%), Positives = 115/396 (29%), Gaps = 44/396 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P++  D Q +   +             +  A K  +   +   ++       S SL E+ 
Sbjct: 36  PFWAYDAQVIQQRIAQLH-AFDV----VRFAQKACSNTHILRLMHSAGVKVDSVSLGEIE 90

Query: 65  LGH-EKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-AQKLHKKIGL 120
                 F    +   +     D    A     +  +      ++      A      + L
Sbjct: 91  RALVAGFQPDSDEIVFTADVLDNPTLAR--IAELKVPVNAGSVDMLHQLGAVSPGHAVWL 148

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174
           RINP   +      +     S+ G    D       IE     + G+  H       +  
Sbjct: 149 RINPGFGHGHSQKTNTGGENSKHGIWPSDLPAAQAAIEQYGLRLIGIHMHIGSGVD-YAH 207

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE-K 224
              +   +      F   +E IS GGG+               Y       R +      
Sbjct: 208 LQQVCDAMVDLVVEFGQDLEAISAGGGLSIPYHYGEEAIDTDHYFGLWDAARQRVADHLG 267

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
           ++V++ +EPG  +V  +  L + V  +     ++ V+VD+     +   +          
Sbjct: 268 HAVKLEIEPGRFLVAESGVLVSQVRAVKEMGSRHFVLVDAGFSDLMRPSMYGSYHHISVM 327

Query: 284 --------NTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNI 328
                         ++V G  C +GD+F        E       K+GD + F D   Y  
Sbjct: 328 AGDNRAIDEQATIDSVVAGPLCESGDVFTQLEGGKVETRAIPAAKVGDYLVFHDTGAYGA 387

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +  + +N   +    +       +  R     D   
Sbjct: 388 SMSSNYNSRPLIPEILFENGEPREIRRAQRIEDLLA 423


>gi|327395055|dbj|BAK12477.1| diaminopimelate decarboxylase [Pantoea ananatis AJ13355]
          Length = 425

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 59/396 (14%), Positives = 119/396 (30%), Gaps = 44/396 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P++  D Q +   +             +  A K  +   +   ++       S SL E+ 
Sbjct: 36  PFWAYDAQVIQQRIAQLH-AFDV----VRFAQKACSNTHILRLMHSAGVKVDSVSLGEIE 90

Query: 65  LGH-EKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-AQKLHKKIGL 120
                 F    +   +     D    A     +  +      ++      A      + L
Sbjct: 91  RALVAGFQPDSDEIVFTADVLDNPTLAR--IAELKVPVNAGSVDMLHQLGAVSPGHAVWL 148

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174
           RINP   +      +     S+ G    D       IE     + G+  H       +  
Sbjct: 149 RINPGFGHGHSQKTNTGGENSKHGIWPSDLPAAQAAIEQYGLRLIGIHMHIGSGVD-YAH 207

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGI----HFTDKDYPVKDFCQRLKEFSEK------ 224
              +   +      F   +E IS GGG+    H+ ++      +        ++      
Sbjct: 208 LQQVCDAMVDLVVEFGQDLEAISAGGGLSIPYHYGEEAIDTDHYFGLWDTARQRVADHLG 267

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
           ++V++ +EPG  +V  +  L + V  +     ++ V+VD+     +   +          
Sbjct: 268 HAVKLEIEPGRFLVAESGVLVSQVRAVKEMGSRHFVLVDAGFSDLMRPSMYGSYHHISVM 327

Query: 284 --------NTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNI 328
                         ++V G  C +GD+F        E       K+GD + F D   Y  
Sbjct: 328 AGDNRAIDEQATIDSVVAGPLCESGDVFTQLEGGKVETRAIPAAKVGDYLVFHDTGAYGA 387

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +  + +N   +    +       +  R     D   
Sbjct: 388 SMSSNYNSRPLIPEILFENGEPREIRRAQRIEDLLA 423


>gi|41407084|ref|NP_959920.1| LysA_1 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41395435|gb|AAS03303.1| LysA_1 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 444

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 54/397 (13%), Positives = 115/397 (28%), Gaps = 37/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+           Y R   GV+++ A K   +  +     +   G    S  E
Sbjct: 48  GTPAYVVDEADFRC--RARRYRRALRGVEVVYAGKSLLSTAVARWAREERLGVDVCSAGE 105

Query: 63  VMLGHEK-FGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +               +      +   +AV      I+ ++  ++      A++  + + 
Sbjct: 106 LATALAGGVDPARIVMHGNAKSPEELREAVRVGVGRIVLDSTIEIAYLAGLARR-RQPVL 164

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCENK 170
           +R+ P +               + G            +  +   I ++ GL  H   +  
Sbjct: 165 IRVTPDIDIHGHRAVTTGVSDQKFGFTLAGDHAADAVRRVLAHPILDLVGLHCHLGSQVS 224

Query: 171 SF----LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV----KDFCQRLKEFS 222
                      M+  +          +  +++GGG                    +++  
Sbjct: 225 DPALYGEAIRRMIAAMADIRARHGVILTELNIGGGHAIPYASGDPELNLDQLADVIEDAL 284

Query: 223 EKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYL 273
           ++          QI +EPG AI          V  +         V     +  +    L
Sbjct: 285 DEACAAERFPRPQIVVEPGRAISGRAGVTLYRVCSVKTQGGGRTFVAVDGGMSDNPRVSL 344

Query: 274 LYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNI 328
                A    N  P        V GR C +GD           ++ GD ++      Y+ 
Sbjct: 345 YGARYAVALANRHPLGLKQRVTVAGRHCESGDEIARDVELPADLRPGDLLAVACTGAYHH 404

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           +  + +N +  P +   +     + +R  +  D    
Sbjct: 405 SMASNYNMVGRPPLVAVSEGRARELVRRETVADLLAR 441


>gi|281211811|gb|EFA85973.1| group IV decarboxylase [Polysphondylium pallidum PN500]
          Length = 427

 Score =  181 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 57/395 (14%), Positives = 105/395 (26%), Gaps = 32/395 (8%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           TP++L    ++L N    L   +          A+K      +   L     G   SSL 
Sbjct: 27  TPFHLYHGDRILENGKKMLSAFRQYFPSYTNFFAVKATPNPHILSLLKSIGMGVDCSSLA 86

Query: 62  EVMLG-HEKFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E++L       G    +        E         TI  + ++Q++   D       ++ 
Sbjct: 87  ELLLAEKVGLKGNEIMFTSNNTPKSEYIKAYELGATINLDDITQIDYLHDALGGKMPEMV 146

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVN--GLMFHNNCENKSFL 173
                                ++ G   +   E+  K     V+  GL            
Sbjct: 147 SLRYNPGPLKNGNCFIGKPQEAKFGLTGEQLFEAYAKLKSLGVSRFGLHCMVASNELKLE 206

Query: 174 CFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK- 224
            F      + +             E ++LGGGI    +            Q +    +K 
Sbjct: 207 YFEETAVLLFETLVAVAKKLDIGFEMVNLGGGIGIPYRLDQTAVDFYRLAQLIDGQFQKI 266

Query: 225 -------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
                      I  E G  +      L T  +      +  + VD+ +   +   +    
Sbjct: 267 VVPAQLKQLPSIVTECGRVVTGPYGVLVTKAIHSKSIYREYIGVDACMANLMRPGMYNAY 326

Query: 278 SATIYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                 ++            + G  C   D F        +   D I   D   +  +  
Sbjct: 327 HYMSVLDSEKRDDQTTKKYDIVGSLCENNDKFAVDRELPVISRDDVIIIHDTGAHGHSMG 386

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366
             +NG       +   D      R  +Y+D +  L
Sbjct: 387 FNYNGKLRSAEYILLGDQIKCIRRAETYDDLFRTL 421


>gi|55377115|ref|YP_134965.1| ornithine decarboxylase [Haloarcula marismortui ATCC 43049]
 gi|55229840|gb|AAV45259.1| ornithine decarboxylase [Haloarcula marismortui ATCC 43049]
          Length = 434

 Score =  181 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 53/384 (13%), Positives = 113/384 (29%), Gaps = 30/384 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D  ++  N +            ++ A K      +   L +       ++  E
Sbjct: 50  GTPLYVVDLDRVAENYERFAAAF--PDAHVMYAAKAHTGQAVLSKLLETGADIECAAWGE 107

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCD------TIIFNTVSQLNKFKDKAQKLH 115
           +           T  Y                       TI        ++ +++    +
Sbjct: 108 LQRAIDAGADPNTLQYTAVNPPDRDLDRAVELAAEHPGLTITGGARDTFDRLEER--GYN 165

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-----KIESEIKNVNGLMFHNNCENK 170
            ++ +RINP +              ++ G    +         E  ++ GL  H      
Sbjct: 166 GRVAIRINPGIGTGHHEKV-ATGKDAKFGIPYDEVPEVAADVRERFDLVGLHAHAGSGVL 224

Query: 171 SFLCFSAMLK-----NIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEF 221
                          ++ +E      +++++  GGG         +   ++   ++++E 
Sbjct: 225 HDDLDDHCRAIGKVADMGREVIADGAELDFVDFGGGFGVPYREDVEPLDMEIVGEKVREA 284

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK-NLVIVDSSVEAHVPDYLLYQESAT 280
                 Q+ LEPG  +V +   + T V  + E     +V VD+S+   +   +       
Sbjct: 285 VGDLDAQVKLEPGRYVVADAECILTEVNTVKETPAATVVGVDASLATLIRPAMFGSYHPI 344

Query: 281 I---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                P        V G  C + D+F         +  D ++  +   Y     N F+  
Sbjct: 345 RNVTAPEREAEPVSVGGPCCTSADVFCTDRPLARPERTDLLAIGNAGAYGYELANQFHSQ 404

Query: 338 NMPTIAVKNVDGTIKAIREFSYND 361
             P         T       +  D
Sbjct: 405 PRPAEVAFEGGETRVVRERETLAD 428


>gi|168236070|ref|ZP_02661128.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|194738024|ref|YP_002115965.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|194713526|gb|ACF92747.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197290650|gb|EDY30004.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
          Length = 420

 Score =  181 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 56/398 (14%), Positives = 113/398 (28%), Gaps = 46/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D   +   +             +  A K  +   +   +        S SL E+ 
Sbjct: 27  PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRAQDVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D    A +S     +   +V  L +    +     ++
Sbjct: 82  RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G    D   +          + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAVMQKYRLKLVGIHMHIGSGVDYG 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223
                    + +        +E IS GGG+    +          Y       R +    
Sbjct: 200 HLEQVCGAMVRQVL-ECGQDVEAISAGGGLSIPYREGEEPVDTRHYYGLWNAAREQIARH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES--- 278
             ++V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +        
Sbjct: 259 LGHAVKLEIEPGRFLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHRIS 318

Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGY 326
                     N      +V G  C +GD+F        E      V  GD +   D   Y
Sbjct: 319 ALAADGRALENGPWVETVVAGPLCESGDVFTQQEGGMVETCALPAVIPGDYLVLHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    + +        R  +  +   
Sbjct: 379 GASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 416


>gi|283479623|emb|CAY75539.1| lysA [Erwinia pyrifoliae DSM 12163]
          Length = 445

 Score =  181 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 56/396 (14%), Positives = 121/396 (30%), Gaps = 44/396 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +  D   +   +             +  A K  +   +   +        S SL E+ 
Sbjct: 55  PLWAYDASIISERISQLQQFDV-----VRFAQKACSNVHILRLMRAAGVKVDSVSLGEIE 109

Query: 65  LGHEKF---GGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
                    GG+   +     D    A +      +   +V  L++    +      + L
Sbjct: 110 RALAAGYQAGGDEIVFTADLLDEATLARVAELKVPVNAGSVDMLHQLGQVS--AGHPVWL 167

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKSFLC 174
           R+NP   +      +     S+ G   +D       ++     + G+  H       +  
Sbjct: 168 RVNPGFGHGHSQKTNTGGENSKHGIWHEDMALALEAMQKYQLKLVGIHMHIGSGVD-YAH 226

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE-K 224
              +   +  +  +F   ++ IS GGG+               Y       R +      
Sbjct: 227 LEQVCDAMVNQVVNFGQDLQAISAGGGLSVPYHFGEETIDTRHYFGLWDAARQRVERHLG 286

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA---- 279
           + V++ +EPG  +V  +  L + V  + +   ++ V+VD+     +   +          
Sbjct: 287 HPVKLEIEPGRYLVAESGVLVSQVRAVKNMGSRHFVLVDAGFNDLMRPSMYGSYHHISAI 346

Query: 280 ----TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNI 328
                         ++V G  C +GD+F        E      V++GD + F D   Y  
Sbjct: 347 AGDGRALDEMNSVESVVAGPLCESGDVFTQLEGGKVETRALPAVQVGDYLVFHDTGAYGA 406

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +  + +N   +    +       +  R  +  +   
Sbjct: 407 SMSSNYNSRPLLPEVLFENGQPRQIRRAQTVAELLA 442


>gi|188534898|ref|YP_001908695.1| diaminopimelate decarboxylase [Erwinia tasmaniensis Et1/99]
 gi|188029940|emb|CAO97824.1| Diaminopimelate decarboxylase [Erwinia tasmaniensis Et1/99]
          Length = 417

 Score =  181 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 55/396 (13%), Positives = 117/396 (29%), Gaps = 44/396 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +  D   +   +             +  A K  +   +   +        S SL EV 
Sbjct: 27  PVWAYDASIIGERISQLQQFDV-----VRFAQKACSNIHILRLMQSAGVKVDSVSLGEVE 81

Query: 65  LGHEKF---GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ-KLHKKIGL 120
                    GG+   +     D    A +      +      ++      +      + L
Sbjct: 82  RALAAGYQAGGDDIVFTADLLDEPTLARIVG--LKVPVNAGSVDMLHQLGKASAGHPVWL 139

Query: 121 RINPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSFLC 174
           R+NP   +      +     S+ G          + I+     + G+  H       +  
Sbjct: 140 RVNPGFGHGHSQKTNTGGENSKHGIWHGDMALALEAIQKYQLKLVGIHMHIGSGVD-YAH 198

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE-K 224
              +   +  +   F   ++ IS GGG+               Y       R +      
Sbjct: 199 LEQVCDAMVSQVIDFGQDLQAISAGGGLSIPYHFGEETIDTQHYFGLWDAARQRVAQHLG 258

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA---- 279
           ++V++ +EPG  +V  +  L + V  + +   ++ V+VD+     +   +          
Sbjct: 259 HAVKLEIEPGRFLVAESGVLVSQVRAVKNMGSRHFVLVDAGFNDLMRPSMYGSYHHISAI 318

Query: 280 ----TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNI 328
                         ++V G  C +GD+F        E      V++GD + F D   Y  
Sbjct: 319 AGDGRALDEVNTVESVVAGPLCESGDVFTQREGGKVETRALPAVQVGDYLVFHDTGAYGA 378

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +  + +N   +    +       +  R  +  +   
Sbjct: 379 SMSSNYNSRPLLPEVLFENGQPRQIRRAQTVAELLA 414


>gi|311894653|dbj|BAJ27061.1| putative diaminopimelate decarboxylase [Kitasatospora setae
           KM-6054]
          Length = 465

 Score =  181 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 59/409 (14%), Positives = 116/409 (28%), Gaps = 48/409 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D+           Y R     ++L A K F    M D + +   G    S  E
Sbjct: 55  GTPLYVFDEG--EARARARAYRRALPEAEVLYAAKAFLCTAMADLVAEEGLGLDVCSAGE 112

Query: 63  VMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + L     F       +      D    A       I+ + ++++ +    A     +  
Sbjct: 113 LRLAAAAGFPAGRILLHGNAKSPDELRLARRLGVGRIVLDNLAEIPRLAALATPDRPQRV 172

Query: 120 L-RINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCEN 169
           L R+ P V+              + G         E  +  +      + GL  H   + 
Sbjct: 173 LVRVLPGVAAGHHAAVRTGVDGQKFGFSIASGEAAEAVRRTLAQPALRLVGLHCHLGSQI 232

Query: 170 KSFLCFSAML----KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK--------DFCQR 217
                +   +    + + +       ++  + LGGG          +            R
Sbjct: 233 TDPAPYRTAVDRLVELLARIRDEHAVELPELDLGGGHGVRYLPGDPELTPAAFAAATTAR 292

Query: 218 LKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI--VDSSVEAHVPDY 272
           L     +++    ++ +EPG A+          VL +    +      VD  +  +    
Sbjct: 293 LAARCAEHALAVPKLLIEPGRAVAAPAAVALYRVLAVKHTAEGRAFAAVDGGMSDNPRPA 352

Query: 273 LLYQESATIYPNTGPY---------------TAMVCGRSCLAGDIFGEFHFEK-PVKIGD 316
           L             P                   V G  C AGD+          ++ GD
Sbjct: 353 LYGSAYTVRVLGRAPRLGGGGVVGSGAGPTRPFDVVGCHCEAGDVLARDAPLPADLRPGD 412

Query: 317 RISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            ++      Y +   + +N +  P +           +R  + +D+   
Sbjct: 413 LLAVPAAGAYQLAMASGYNLVGRPALVAARDGRARLLVRRETVDDFLAR 461


>gi|54297723|ref|YP_124092.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein
           [Legionella pneumophila str. Paris]
 gi|53751508|emb|CAH12926.1| hypothetical protein lpp1774 [Legionella pneumophila str. Paris]
          Length = 859

 Score =  181 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 57/365 (15%), Positives = 105/365 (28%), Gaps = 25/365 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I +P Y+                 ++    L  A+K      +  TL +   G    S+ 
Sbjct: 500 IHSPCYVYHSPTQATRARQL-SALESID-SLFYAIKANPFPSILKTLEKEGIGFECVSIQ 557

Query: 62  EVMLGHEKFG---GETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKK 117
           E+ L  + F     E   +   +               +  +++  L  +        ++
Sbjct: 558 ELELVLKLFPNIKKERILFTPNFAPKSEYEFALQTGCYVTIDSLYPLENWPKL--FKDRE 615

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKS 171
           + +RI+P                S+ G    D        ++    V GL  H+     S
Sbjct: 616 VIVRIDPGTGAGHHKHVSTGGNESKFGITQNDISKILSHTKANHIKVIGLHAHSGSGILS 675

Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI-- 229
              +      +         ++  I+LGGG+   +K          L         Q   
Sbjct: 676 TDLW-QQTAVMLASLTDQFPEVRSINLGGGLGIVEKPGQHPIDFAALDAQLMAVKSQYPG 734

Query: 230 ---YLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATI---- 281
              +LEPG   V  +  +   V    E  K   I +++ + + +   L       I    
Sbjct: 735 LAIWLEPGRFFVAESGVILAKVTQCKEKGKVKFIGIETGMNSLIRPSLYGAYHEIINLTR 794

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                   A + G  C +GD  G        + GD I   +   Y     + +N      
Sbjct: 795 LHEEKAGFAHIVGPICESGDTLGYDRLLPVTREGDVILIANTGAYGHCMSSHYNLRPPAQ 854

Query: 342 IAVKN 346
             V  
Sbjct: 855 EIVLE 859


>gi|288818467|ref|YP_003432815.1| ornithine decarboxylase [Hydrogenobacter thermophilus TK-6]
 gi|288787867|dbj|BAI69614.1| ornithine decarboxylase [Hydrogenobacter thermophilus TK-6]
 gi|308752057|gb|ADO45540.1| Orn/DAP/Arg decarboxylase 2 [Hydrogenobacter thermophilus TK-6]
          Length = 390

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 53/357 (14%), Positives = 120/357 (33%), Gaps = 18/357 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP  L+D + +                ++  A+K      +   L++   G   +SL E
Sbjct: 38  ETPLLLLDLEGIKRRYKEIE--LYMPNFRIYYAVKANDHTSVIKALSEKGSGFEVASLEE 95

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +      K   E    +   K  E        + +    ++ +++ K    A++    + 
Sbjct: 96  LKKVLSLKVEPERIISSNPVKSEEFIDYAYSVHVNRFAVDSFTEVEKIAKVAKRARVYVR 155

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           L +    S                     +    +     G+ FH   +  ++  +   +
Sbjct: 156 LVVPNEGSDWPLSKKF--GVDVDTAIDILEYAREKGLVPYGITFHVGSQCNNYRNWFIAI 213

Query: 180 KNIEKEFGH---FITQIEWISLGGGIHFTDKDY-----PVKDFCQ-RLKEFSEKYSVQIY 230
           +   + +        +++ +++GGGI             +  + +  L++F      ++ 
Sbjct: 214 RKSAELWEKAKRRGFRLQMLNMGGGIPVKYTYEALRIEDIAYYIKGLLQKFFPNPPHELQ 273

Query: 231 LEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-Y 288
           +EPG  IV +   + T ++     N +N + VD+ V   + + L            G   
Sbjct: 274 IEPGRGIVGDQGIMITRIIGKAKRNDENWLYVDTGVFNGLAEALGGIRYPFYIDREGELK 333

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
              + G SC + D+  +       ++GD +       Y     + FNG  MP +   
Sbjct: 334 EWTIGGVSCDSMDVIAKMVALPEPEVGDHLYILSAGAYTTVYASNFNGFPMPKVLCL 390


>gi|116671170|ref|YP_832103.1| diaminopimelate decarboxylase [Arthrobacter sp. FB24]
 gi|116611279|gb|ABK04003.1| diaminopimelate decarboxylase [Arthrobacter sp. FB24]
          Length = 500

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 62/436 (14%), Positives = 121/436 (27%), Gaps = 73/436 (16%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA------GVKLLLALKCFAAWGMFDTLNQYMDGTT 56
            TP +++ +               +A      GV +  A K F    +   + +      
Sbjct: 61  GTPLFVMSENDFRARARAFSDAFNDAFADICGGVDVYYAGKSFLCTAVVRWVEEEGLRLD 120

Query: 57  SSSLYE-VMLGHEKFGG-ETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
           ++S  E  +       G +   +     D E   A+      I+ +++++L +    A  
Sbjct: 121 TASGGELAVAARAGIPGADVALHGNNKSDAEIHRALDMKLGRIVVDSLAELERIAAIASA 180

Query: 114 LHKKIG--LRINPSVSYSKFILADPNRPFSRLGEKCKD-----------------KIESE 154
             +     LR+ P V               + G    +                      
Sbjct: 181 RGETARVMLRLTPGVHAHTHEFIATAHEDQKFGLSMAEDSTDQAGLSAAEEAVAAATGFA 240

Query: 155 IKNVNGLMFHNNCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
              + GL  H   +      F      +L+ +      +   +  + LGGG         
Sbjct: 241 GIELLGLHCHIGSQIFEPDGFALAAVKLLRFLAAMQEKYSIVLPELDLGGGYGIAYTPVD 300

Query: 211 VKD--------FCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDIS------- 252
                          ++   E+    + +I +EPG AIV  +T     V  +        
Sbjct: 301 TPRPPAEIAQAMAAVVRSTCEELGITAPRISIEPGRAIVGTSTFTLYEVGTLKTVRVDAP 360

Query: 253 ------------------ENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTA 290
                                +  V VD  +  +    L   + + I         P  +
Sbjct: 361 AAADGAAADQAGNTAKNVTYPRRYVSVDGGMSDNARPVLYDADYSAIVASRTSGAAPQLS 420

Query: 291 MVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349
            V G+ C +GDI     +    V  GD ++      Y     + +N +  P +       
Sbjct: 421 RVVGKHCESGDIVVRDVYLPEDVAAGDLLAVPGTGAYCWALSSNYNYLARPGVVAVRDGS 480

Query: 350 TIKAIREFSYNDYYNN 365
               +R  +  D  N 
Sbjct: 481 ARLIVRGETEQDLLNR 496


>gi|300865977|ref|ZP_07110713.1| Diaminopimelate decarboxylase [Oscillatoria sp. PCC 6506]
 gi|300336043|emb|CBN55871.1| Diaminopimelate decarboxylase [Oscillatoria sp. PCC 6506]
          Length = 412

 Score =  180 bits (456), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 56/380 (14%), Positives = 121/380 (31%), Gaps = 19/380 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+    +L   LD          V+   A        +   + Q   G  +++  +
Sbjct: 30  GSPLYVYQGDRLRQTLDRIARSIDYPQVQFHFASVTNGNIALLQLIQQAGWGLHANTPGD 89

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           V LG    F  +   Y  +          +  N +   F+++SQL+ F D ++   + I 
Sbjct: 90  VFLGLKAGFTSDRIVYTGSNLSRVDIQQLLDWNINRFNFDSLSQLHDFCDCSRSQARSIH 149

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
             I   ++  +              +K     +     + GL F+      +   F   +
Sbjct: 150 SEIGLRLNSPELTGDSRIGVRPAEFDKANAIAQQHGFKITGLHFYRGTGTNATSAFIDAI 209

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTD---KDYPVKDFCQRL--KEFSEKYSVQIYLEPG 234
             +       +     +  GGG  +       +  ++F   +  K  +  + +++ +EPG
Sbjct: 210 DRV-VAIAQQLPDWRSLDFGGGFGYPYRGGAAFDWREFGTAITQKLTARSHPIELVIEPG 268

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPNTG------- 286
            A +     +   V+ +       ++   +  A++    +     A              
Sbjct: 269 RAAIAGCGVMLAKVVSVKWQCDRQIVGVDTTVANLSVPAVHGGYRAIAVWENESSLGDST 328

Query: 287 --PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344
              Y   +CG +  + D  G   +   +KIGD I+  D   Y     + F     P   +
Sbjct: 329 RSRYQTDICGNTTYSRDYLGRNCWLPSLKIGDAIAILDSGAYGYAMSSHFLHRPRPAEVL 388

Query: 345 KNVDGTIKAIREFSYNDYYN 364
              +      +   Y+   N
Sbjct: 389 IEGNHHRLIRQREDYSILLN 408


>gi|326403276|ref|YP_004283357.1| diaminopimelate decarboxylase [Acidiphilium multivorum AIU301]
 gi|325050137|dbj|BAJ80475.1| diaminopimelate decarboxylase [Acidiphilium multivorum AIU301]
          Length = 438

 Score =  180 bits (456), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 52/388 (13%), Positives = 109/388 (28%), Gaps = 27/388 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP ++     +   L          G    +  A+K      +   +     G   +S 
Sbjct: 44  GTPTWVYSAATIEGRLAALRAAFAGEGLAPAIRYAVKANDHLAILGLVRAGGAGADVTSA 103

Query: 61  YEVMLG-HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E               ++     +D    A+ +    +   +  +L      A    + 
Sbjct: 104 GEFARAEAAGIAPGAMVFSGVGKREDELRRALAAGIGQLNVESAEELEMISGIAAAMGVA 163

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-----NVNGLMFHNNCENK 170
             + LR+NP V+          R   + G    D             +  + F  +  ++
Sbjct: 164 APVALRVNPDVAAGGHDKISTGRKGDKFGIGFDDAGALYRHAAALPGIEAVGFSTHIGSQ 223

Query: 171 SFLCFSAMLKNIEK-----EFGHFITQIEWISLGGGIHFTDKD---YPVKDFCQRLKEFS 222
            F   +                     +  + LGGG      D   +P       ++   
Sbjct: 224 IFAPAAFEAAYRRVLGLIGALRGEGLAVRRLDLGGGFGIPYDDGTAFPFAAQAAMVRRVL 283

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATI 281
             + +++ +EPG  +V     L   V  +     +  V++D+ +   +   L       +
Sbjct: 284 GGHDLELIVEPGRWLVGPAGVLLARVTLVKRAGAERFVVLDAGMNDLIRPALYGARHGIV 343

Query: 282 -----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                     P  A V G  C + D FG       +  G  ++  D   Y     + +NG
Sbjct: 344 PVGAADAAGAPAPAEVVGPVCESSDRFGTHD-LPELAPGALVALLDAGAYGATMSSTYNG 402

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYYN 364
                  +          R  + ++ + 
Sbjct: 403 RPFAAQVMIADGAPQLIRRRQALDELWR 430


>gi|325963845|ref|YP_004241751.1| diaminopimelate decarboxylase [Arthrobacter phenanthrenivorans
           Sphe3]
 gi|323469932|gb|ADX73617.1| diaminopimelate decarboxylase [Arthrobacter phenanthrenivorans
           Sphe3]
          Length = 491

 Score =  180 bits (456), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 66/430 (15%), Positives = 127/430 (29%), Gaps = 67/430 (15%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA------GVKLLLALKCFAAWGMFDTLNQYMDGTT 56
            TP +++ +               NA      GV +  A K F    +   + +      
Sbjct: 58  GTPLFVMSENDFRARARAFSDAFNNAFADVCGGVDVYYAGKSFLCTAVVRWVEEEGLRLD 117

Query: 57  SSSLYE-VMLGHEKFGG-ETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
           ++S  E  +       G +   +     D E   A+      I+ +++ +L +  D A++
Sbjct: 118 TASGGELAVAAKAGIPGADVALHGNNKSDGEIHRALDMKLGRIVVDSLGELVRVGDIAER 177

Query: 114 L--HKKIGLRINPSVSYSKFILADPNRPFSRLG-----EKCKDK----------IESEIK 156
                K+ LR+ P V               + G     +  +              S   
Sbjct: 178 RGEQAKVMLRLTPGVHAHTHEFIATAHEDQKFGLSMAADTTEQAGLSAAEEAVAAASAHP 237

Query: 157 NVN--GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYP 210
            +   GL  H   +      F+   + + +       +    +  + LGGG         
Sbjct: 238 GIELLGLHCHIGSQIFEPEGFAMAAEKLLRFLAAMQEKYSIVLPELDLGGGYGIAYTPVD 297

Query: 211 VKDFCQ--------RLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISE------ 253
                          ++    +    S +I +EPG AIV +TT     V  +        
Sbjct: 298 TPRPAAEIAEAMAAVVRSTCAELGIDSPRISIEPGRAIVGSTTFTLYEVGTLKTVRVDAP 357

Query: 254 -------------NIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRS 296
                          +  V VD  +  +    L   + + I      +  P  + V G+ 
Sbjct: 358 AEPGASDGGNNVTYPRRYVSVDGGMSDNARPVLYDADYSAILASRTSSAAPQLSRVVGKH 417

Query: 297 CLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           C +GDI     +    V  GD ++      Y     + +N +  P +           +R
Sbjct: 418 CESGDIVVRDVYLPEDVAAGDLLAVPGTGAYCWALSSNYNYLARPGVVAVRDGSARLIVR 477

Query: 356 EFSYNDYYNN 365
             +  D  N 
Sbjct: 478 GETEEDLLNR 487


>gi|254774026|ref|ZP_05215542.1| diaminopimelate decarboxylase [Mycobacterium avium subsp. avium
           ATCC 25291]
          Length = 446

 Score =  180 bits (456), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 54/397 (13%), Positives = 115/397 (28%), Gaps = 37/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+           Y R   GV+++ A K   +  +     +   G    S  E
Sbjct: 50  GTPVYVVDEADFRC--RARRYRRALRGVEVVYAGKSLLSTAVARWAREERLGVDVCSAGE 107

Query: 63  VMLGHEK-FGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +               +      +   +AV      I+ ++  ++      A++  + + 
Sbjct: 108 LATALAGGVDPARIVMHGNAKSPEELREAVRVGVGRIVLDSTIEIAYLAGLARR-RQPVL 166

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCENK 170
           +R+ P +               + G            +  +   I ++ GL  H   +  
Sbjct: 167 IRVTPDIDIHGHRAVTTGVSDQKFGFTLAGDHAADAVRRVLAHPILDLVGLHCHLGSQVS 226

Query: 171 SF----LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV----KDFCQRLKEFS 222
                      M+  +          +  +++GGG                    +++  
Sbjct: 227 DPALYGEAIRRMIAAMADVRARHGVILTELNIGGGHAIPYASGDPELNLDQLADVIEDAL 286

Query: 223 EKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYL 273
           ++          QI +EPG AI          V  +         V     +  +    L
Sbjct: 287 DEACAAERFPRPQIVVEPGRAISGRAGVTLYRVCSVKTQCGGRTFVAVDGGMSDNPRVSL 346

Query: 274 LYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFH-FEKPVKIGDRISFEDVAGYNI 328
                A    N  P        V GR C +GD           ++ GD ++      Y+ 
Sbjct: 347 YGARYAVALANRHPLGLKQRVTVAGRHCESGDEIARDVGLPADLRPGDLLAVACTGAYHH 406

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           +  + +N +  P +   +     + +R  +  D    
Sbjct: 407 SMASNYNMVGRPPLVAVSEGRARELVRRETVADLLAR 443


>gi|118464302|ref|YP_880409.1| diaminopimelate decarboxylase [Mycobacterium avium 104]
 gi|118165589|gb|ABK66486.1| diaminopimelate decarboxylase [Mycobacterium avium 104]
          Length = 444

 Score =  180 bits (456), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 54/397 (13%), Positives = 115/397 (28%), Gaps = 37/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+           Y R   GV+++ A K   +  +     +   G    S  E
Sbjct: 48  GTPVYVVDEADFRC--RARRYRRALRGVEVVYAGKSLLSTAVARWAREERLGVDVCSAGE 105

Query: 63  VMLGHEK-FGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +               +      +   +AV      I+ ++  ++      A++  + + 
Sbjct: 106 LATALAGGVDPARIVMHGNAKSPEELREAVRVGVGRIVLDSTIEIAYLAGLARR-RQPVL 164

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNCENK 170
           +R+ P +               + G            +  +   I ++ GL  H   +  
Sbjct: 165 IRVTPDIDIHGHRAVTTGVSDQKFGFTLAGDHAADAVRRVLAHPILDLVGLHCHLGSQVS 224

Query: 171 SF----LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV----KDFCQRLKEFS 222
                      M+  +          +  +++GGG                    +++  
Sbjct: 225 DPALYGEAIRRMIAAMADVRARHGVILTELNIGGGHAIPYASGDPELNLDQLADVIEDAL 284

Query: 223 EKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYL 273
           ++          QI +EPG AI          V  +         V     +  +    L
Sbjct: 285 DEACAAERFPRPQIVVEPGRAISGRAGVTLYRVCSVKTQCGGRTFVAVDGGMSDNPRVSL 344

Query: 274 LYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFH-FEKPVKIGDRISFEDVAGYNI 328
                A    N  P        V GR C +GD           ++ GD ++      Y+ 
Sbjct: 345 YGARYAVALANRHPLGLKQRVTVAGRHCESGDEIARDVGLPADLRPGDLLAVACTGAYHH 404

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           +  + +N +  P +   +     + +R  +  D    
Sbjct: 405 SMASNYNMVGRPPLVAVSEGRARELVRRETVADLLAR 441


>gi|85702213|ref|NP_001030044.1| ornithine decarboxylase-like [Mus musculus]
 gi|74180789|dbj|BAE25605.1| unnamed protein product [Mus musculus]
 gi|187466332|emb|CAQ51836.1| novel protein similar to ornithine decarboxylase, structural 1 Odc1
           [Mus musculus]
 gi|220939007|emb|CAM45915.2| novel protein similar to ornithine decarboxylase, structural 1 Odc1
           [Mus musculus]
 gi|223461739|gb|AAI47396.1| Gene model 853, (NCBI) [Mus musculus]
 gi|223462101|gb|AAI47395.1| Gene model 853, (NCBI) [Mus musculus]
          Length = 425

 Score =  180 bits (456), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 54/361 (14%), Positives = 105/361 (29%), Gaps = 25/361 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           + + D   L++   T L       V+   A+KC +   +   L     G   +S  E+  
Sbjct: 52  FMVADLDVLVSRHRTFLQALPR--VQPFYAVKCNSNPWVLLVLAALGTGFDCASQGELEQ 109

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       +    K        + C   +    ++    K        ++ LRI  
Sbjct: 110 VLGLGVAPSRIIFANPCKAVSHIQFAARCGVQLLTFDNEEELIKLARYHPRARLVLRIQT 169

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S S F L                        V G  FH   +  +   +   + +  +
Sbjct: 170 LDSQSTFPLHTKFGAHLEACGHLLQVARELGLAVVGASFHVGSDCHTPESYRQAIADCHR 229

Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRL------KEFSEKYSVQIYLEPGE 235
            F         +  + LGGG           +   R+      + F E+  +++  EPG 
Sbjct: 230 VFEMGCKAGHHMSLLDLGGGFPGVKGSEAKFEEVARVINTALAQYFPEETGIEVIAEPGR 289

Query: 236 AIVTNTTTLNTTVL----------DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285
               +  T    ++                             + D +           +
Sbjct: 290 FYAGSVCTAAVNIIVKKSSLDPGGHRKLAYYLNEGHYGVFRLFLRDPVPRIPIVVKEFPS 349

Query: 286 GP--YTAMVCGRSCLAGD-IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
            P  +   + G +C A D +F        + +GD + F D+  Y+ +  + FNG  + T+
Sbjct: 350 EPPLFPCTLYGPTCDAYDRLFSTEVQLPELDVGDWLIFPDMGAYSSSMSSTFNGFPIATV 409

Query: 343 A 343
            
Sbjct: 410 Y 410


>gi|254821292|ref|ZP_05226293.1| LysA_2 [Mycobacterium intracellulare ATCC 13950]
          Length = 472

 Score =  179 bits (455), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 55/406 (13%), Positives = 121/406 (29%), Gaps = 45/406 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +++D+    +            G  +  A K F    +   +++        +  E
Sbjct: 64  GTPLFVVDEDDFRSRCREIASAFGG-GKNVHYAAKAFLCSEIARWIDEEGLSLDVCTGGE 122

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + +     F  E   ++   K       AV +    ++ ++++++ +    A +      
Sbjct: 123 LAVALHANFPPERITFHGNNKSVAELTAAVKAGVGHVVLDSMTEIERLNTIAGEAGIVQD 182

Query: 120 LRIN--PSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168
           + +     V               + G                E+E   V GL  H   +
Sbjct: 183 VFVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAALAAVGRVFEAEHLRVVGLHSHIGSQ 242

Query: 169 NKSFLCFSAM--------LKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQ 216
                 F            + +E+       QI  + LGGG+  +        P+ +   
Sbjct: 243 IFDVAGFELAARRVLGLLHEAVEQFGVEKTAQISTVDLGGGLGISYLAADDPPPMGELAA 302

Query: 217 RLKEFSEKY-------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS----- 264
           +L    +         + ++ +EPG AI    T     V  + +   +            
Sbjct: 303 KLSAIVKNESEAVGLPTPRLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDG 362

Query: 265 -VEAHVP----DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRI 318
            +  ++     D        +   +     A V G+ C +GDI     +    +  GD I
Sbjct: 363 GMSDNIRTALYDAQYDARLVSRLSDAPAELARVVGKHCESGDIVVRDTWVPGDLHPGDLI 422

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
                  Y  +  + +N +  P +           +R  + +D  +
Sbjct: 423 GVAATGAYCYSLSSRYNMVCRPAVVAVRDRRARLLLRRETVDDLLS 468


>gi|15837718|ref|NP_298406.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein
           [Xylella fastidiosa 9a5c]
 gi|9106073|gb|AAF83926.1|AE003947_6 bifunctional diaminopimelate decarboxylase/aspartate kinase
           [Xylella fastidiosa 9a5c]
          Length = 868

 Score =  179 bits (454), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 49/362 (13%), Positives = 103/362 (28%), Gaps = 24/362 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y+     +         +      +   A+K      +  TL +   G    SL E+ 
Sbjct: 510 PCYVYHLPTVRERARQLNAVAAVD--QRYYAIKANPHPAILRTLIEEGFGLECVSLGELR 567

Query: 65  LGHEKFG---GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                          +  ++               +     +  +   +  +  + + LR
Sbjct: 568 HVFAVVPHLVPSRVLFTPSFASRVEYEQAFLLGVNVTLDNVEALRLWPEVFR-DRTLWLR 626

Query: 122 INPSVSYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175
           I+                 S+ G      ++  D  ++    V GL  H     +    +
Sbjct: 627 IDLGYGDGHHEKVTTGGKTSKFGLSVTRIDEFIDVAKTLNIIVTGLHAHLGSGVERGDHW 686

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-----YSVQIY 230
           S M   +          +  + +GGG+    +        +       +       +Q+ 
Sbjct: 687 SRMYDELAGFASRIG-SVSTLDIGGGLPIPYRPDDEPFDVEAWGVSLAEVKALHPKLQLV 745

Query: 231 LEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----ATIYPNT 285
           +EPG  +V     L T V   I ++    V +++ +   +   L          +     
Sbjct: 746 IEPGRFLVAEAGVLLTRVTQVIEKDGIRRVGLEAGMHTLIRPALYDAWHDVENLSRLDEI 805

Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKI-GDRISFEDVAGYNINRKNWFNGINMPTIAV 344
                 V G  C + D+FG           GD +   D   Y  +  + +N   +P   V
Sbjct: 806 PHVLCDVVGPICESSDVFGRCRHLPAATASGDLMLIADAGAYGFSMASTYNLRGLPAEVV 865

Query: 345 KN 346
            +
Sbjct: 866 LD 867


>gi|319760400|ref|YP_004124338.1| diaminopimelate decarboxylase [Candidatus Blochmannia vafer str.
           BVAF]
 gi|318039114|gb|ADV33664.1| diaminopimelate decarboxylase [Candidatus Blochmannia vafer str.
           BVAF]
          Length = 428

 Score =  179 bits (454), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 65/403 (16%), Positives = 121/403 (30%), Gaps = 50/403 (12%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE-- 62
           P ++ D   ++N +             +  A K  +   +   +        + SL E  
Sbjct: 28  PVWIYDSSIIINRITQLRQFD-----IIRFAQKSCSNIHILKLMYNNGVKIDAVSLGEIE 82

Query: 63  -VMLGHEKFGGET--HAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
             +L   KFG E     +     + E   +      I  N  S     +  +     ++ 
Sbjct: 83  RALLAGFKFGKEKSEIIFTADILEEETL-LKILELKIPVNIGSIDMIIQLGSCSPGHEVW 141

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCENKSFL 173
           +RINP   Y      +     S+ G   +D   +          + GL  H         
Sbjct: 142 MRINPGFGYGHNNKTNTGGENSKHGIWYEDVPIALFYMRRYNLKLTGLHMHIGSGVHYSH 201

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE---------- 223
                   +E+    +   ++ IS GGG+    K         R     +          
Sbjct: 202 LSKVSTVMVEQIL-KYKIDLKVISCGGGLTIPYKFTDQVVNVNRYFNIWDHARKSISKYL 260

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA--- 279
           K+S+Q+ +EPG  +V  +  L T +  I        + +D+     +   +         
Sbjct: 261 KHSIQLEIEPGRFLVAESGILVTQIRAIKTTGSRRFVLIDAGYNDLMRPVMYGSYHHISI 320

Query: 280 ----------TIYPNTGPYTAMVCGRSCLAGDIFGEF-------HFEKP-VKIGDRISFE 321
                      I         +V G  C AGD+F +              VK+GD + F 
Sbjct: 321 VFGERNSNDKDICLGEELSDVVVGGPLCEAGDVFTQGANGEILSRKLPDSVKVGDYLIFH 380

Query: 322 DVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           D   Y  +  + +N   +    +       +  R+    D + 
Sbjct: 381 DTGAYGASMSSNYNTRPLLPEVLLEDGKIREIRRKQKLEDLFA 423


>gi|254415374|ref|ZP_05029135.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein
           [Microcoleus chthonoplastes PCC 7420]
 gi|196177849|gb|EDX72852.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein
           [Microcoleus chthonoplastes PCC 7420]
          Length = 391

 Score =  179 bits (454), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 55/377 (14%), Positives = 121/377 (32%), Gaps = 15/377 (3%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+    +L + +    Y       +   A        +     Q   G   ++  +
Sbjct: 12  GSPLYVYQGDRLRDTIHYITYAVPYPRTRFQFASVTNGNIALLQIFQQEGWGLHGNTPGD 71

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKK-I 118
           + LG    F  +   Y+ +  +      + +     +  +++SQL+      Q L  K  
Sbjct: 72  IYLGLKAGFAPDKIVYSGSNLNYPEMEQVLHWGITTLNLDSISQLDLCCQVYQSLTPKLP 131

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
            L +   ++  +           +         +S    + G+ F+      +   F+ +
Sbjct: 132 RLNLGLRLNVPELTGDSRIGVRPKEFPDALKITQSAGLQLQGIHFYRGTGTNATKAFTQV 191

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFSEK--YSVQIYLE 232
           +     E G  +   +++  GGG  +  +     +  + F Q + +  E     + + +E
Sbjct: 192 ID-SLCEIGQQLPDWDYLDFGGGFGYPYQGNGVTFDWQGFGQAITQKLETIGRPIDLIIE 250

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPNT---GPY 288
           PG A +    +L   V+ +       ++   +  A++    +       I         Y
Sbjct: 251 PGRAAIAGCASLLAKVVSVKWQNGKQIVGVDTTVANLSVPSVHGGYRKIISFTDNQGEQY 310

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348
              VCG +  + D  G       +KIGD I+  D   Y     + F     P   +    
Sbjct: 311 PTDVCGNTTYSRDYLGRNCQLPALKIGDVIAILDSGAYGYAMSSHFLHRPRPAEVLVEQG 370

Query: 349 GTIKAIREFSYNDYYNN 365
                 +   Y+    N
Sbjct: 371 THRLIRKREDYSVLLKN 387


>gi|322368446|ref|ZP_08043015.1| diaminopimelate decarboxylase [Haladaptatus paucihalophilus DX253]
 gi|320552462|gb|EFW94107.1| diaminopimelate decarboxylase [Haladaptatus paucihalophilus DX253]
          Length = 425

 Score =  179 bits (453), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 67/397 (16%), Positives = 123/397 (30%), Gaps = 35/397 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTS--- 57
            +P Y   +  L  N  T            ++  A+K     G+   L        +   
Sbjct: 22  GSPLYAFFEDDLRANYGTLRDALDEQYPNSEVHFAVKANYNLGVLSVLRDAGCKAEAYAR 81

Query: 58  SSLYEVMLGHEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
             L         F  E           +    A+      ++ +  ++L K    A+   
Sbjct: 82  CELTATRRA--GFDPEDVLLTGMNRAPEDIERALDWGVSHLLVDNATELEKILVAAEATE 139

Query: 116 KKIGLRI--NPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFH 164
               + I  NP++              S+ G            +  +ESE  ++ G+  H
Sbjct: 140 TVPDMLIRGNPAMEVPTHPEVATATRESKFGLDIESGRAMAVARQAVESEFVSLAGVQLH 199

Query: 165 NNCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK------DF 214
              + +    +      ML            +I+ + LGGG      +            
Sbjct: 200 VGSQIRGVEPYGVAGREMLGFAADVRDELGVEIDVLDLGGGFPVPYDEDVPDTETIVAHM 259

Query: 215 CQRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPD 271
            + ++E   +Y     ++++EPG  +V N  T   TV  + E       V       V  
Sbjct: 260 AETIRETCAQYDLDEPRLFVEPGRRLVGNAGTFLGTVGVVKETPYADFAVLDGGTNAVSS 319

Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
           Y  Y   A +       T  V G  C +GD+  E      +  GD ++ + +  Y++   
Sbjct: 320 YWPYPVYA-VKDREPTRTYHVAGPLCYSGDVLSEDVPLPELGPGDLVAVDRIGAYSLGSA 378

Query: 332 NWFNGINMPTIAVKNVDGTI-KAIREFSYNDYYNNLS 367
           +  N    P + +   DG      +  S +D   N S
Sbjct: 379 SHTNAEPKPPVVLVRSDGGYDLLRKRESCDDVLGNDS 415


>gi|58040374|ref|YP_192338.1| diaminopimelate decarboxylase [Gluconobacter oxydans 621H]
 gi|58002788|gb|AAW61682.1| Diaminopimelate decarboxylase [Gluconobacter oxydans 621H]
          Length = 424

 Score =  179 bits (453), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 62/389 (15%), Positives = 116/389 (29%), Gaps = 26/389 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           + TP ++   + L           +     V +  A+K          L Q   G    S
Sbjct: 21  VGTPCWITGAETLRRRAKALRAAFEARNLPVNMHFAMKSQDHQATLTILRQCGYGVDIVS 80

Query: 60  LYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK 116
             E+              ++   K           D   I   +V +L +  D A+   +
Sbjct: 81  GGEMQRALHAGISPSGIVFSGVGKSDAELRAAVEHDIAQINVESVEELYRLDDIARACGR 140

Query: 117 KIG--LRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNC 167
                LR+NP V           R   + G + +       +    +   + GL  H   
Sbjct: 141 VARAALRVNPDVDADTHDKISTGRAGDKFGIEHRRAVALYGEAASLKNVRLVGLAVHLGS 200

Query: 168 EN---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEF 221
           +      F    + L ++ +E       +E +  GGG+    +D            L E 
Sbjct: 201 QMLTAGPFREGYSRLADMVREIRAAGHTVEAVDCGGGLGIRYRDEIAPSPDMLAGVLAET 260

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
                V++ +EPG  +   T  L T V++      + V++D+++       L       +
Sbjct: 261 LGDLDVRLSIEPGRWLSAPTGILLTRVIETKAGNPDFVVLDAAMNDLARPSLYESWHGIM 320

Query: 282 YPNTG-----PYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFN 335
                          + G  C + DIF          K GD I+  D   Y     + +N
Sbjct: 321 PVAPNGLTSLTKLWDIVGPVCESSDIFARDRALPADTKRGDLIALLDTGAYGSVMSSTYN 380

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              +    + +        +  S  +   
Sbjct: 381 TRPLAAQVLIDNGKWEIIRQRQSVAELIA 409


>gi|148359357|ref|YP_001250564.1| hypothetical protein LPC_1255 [Legionella pneumophila str. Corby]
 gi|296107404|ref|YP_003619104.1| aspartate kinase [Legionella pneumophila 2300/99 Alcoy]
 gi|148281130|gb|ABQ55218.1| hypothetical protein LPC_1255 [Legionella pneumophila str. Corby]
 gi|295649305|gb|ADG25152.1| aspartate kinase [Legionella pneumophila 2300/99 Alcoy]
 gi|307610512|emb|CBX00096.1| hypothetical protein LPW_18421 [Legionella pneumophila 130b]
          Length = 853

 Score =  178 bits (452), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 57/365 (15%), Positives = 105/365 (28%), Gaps = 25/365 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I +P Y+                 ++    L  A+K      +  TL +   G    S+ 
Sbjct: 494 IHSPCYVYHSPTQATRARQL-SALESID-SLFYAIKANPFPTILKTLEKEGIGFECVSIQ 551

Query: 62  EVMLGHEKFG---GETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKK 117
           E+ L  + F     E   +   +               +  +++  L  + D      ++
Sbjct: 552 ELELVLKLFPNIKKERILFTPNFAPKSEYEFALQTGCYVTIDSLYPLENWPDL--FKDRE 609

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKS 171
           + +RI+P                S+ G    D        +     V GL  H+     S
Sbjct: 610 VIVRIDPGTGAGHHKHVSTGGNESKFGITQNDISKILSLTKVNHIKVIGLHAHSGSGILS 669

Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI-- 229
              +      +         ++  I+LGGG+   +K          L         Q   
Sbjct: 670 TDLW-QQTAVMLASLTDQFPEVRSINLGGGLGIVEKPGQHPIDFAALDAQLMAVKSQYPG 728

Query: 230 ---YLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATI---- 281
              +LEPG   V  +  +   V    E  K   I +++ + + +   L       +    
Sbjct: 729 LAIWLEPGRFFVAESGVILAKVTQCKEKGKVKFIGIETGMNSLIRPSLYGAYHEIVNLTR 788

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                   A + G  C +GD  G        + GD I   +   Y     + +N      
Sbjct: 789 LHEEKAGFAHIVGPICESGDTLGYDRLLPVTREGDVILIANTGAYGHCMSSHYNLRPPAQ 848

Query: 342 IAVKN 346
             V  
Sbjct: 849 EIVLE 853


>gi|52842038|ref|YP_095837.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein
           [Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1]
 gi|52629149|gb|AAU27890.1| aspartokinase [Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1]
          Length = 859

 Score =  178 bits (452), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 57/365 (15%), Positives = 105/365 (28%), Gaps = 25/365 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I +P Y+                 ++    L  A+K      +  TL +   G    S+ 
Sbjct: 500 IHSPCYVYHSPTQATRARQL-SALESID-SLFYAIKANPFPTILKTLEKEGIGFECVSIQ 557

Query: 62  EVMLGHEKFG---GETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKK 117
           E+ L  + F     E   +   +               +  +++  L  + D      ++
Sbjct: 558 ELELVLKLFPNIKKERILFTPNFAPKSEYEFALQTGCYVTIDSLYPLENWPDL--FKDRE 615

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKS 171
           + +RI+P                S+ G    D        +     V GL  H+     S
Sbjct: 616 VIVRIDPGTGAGHHKHVSTGGNESKFGITQNDISKILSLTKVNHIKVIGLHAHSGSGILS 675

Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI-- 229
              +      +         ++  I+LGGG+   +K          L         Q   
Sbjct: 676 TDLW-QQTAVMLASLTDQFPEVRSINLGGGLGIVEKPGQHPIDFAALDAQLMAVKSQYPG 734

Query: 230 ---YLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATI---- 281
              +LEPG   V  +  +   V    E  K   I +++ + + +   L       +    
Sbjct: 735 LAIWLEPGRFFVAESGVILAKVTQCKEKGKVKFIGIETGMNSLIRPSLYGAYHEIVNLTR 794

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                   A + G  C +GD  G        + GD I   +   Y     + +N      
Sbjct: 795 LHEEKAGFAHIVGPICESGDTLGYDRLLPVTREGDVILIANTGAYGHCMSSHYNLRPPAQ 854

Query: 342 IAVKN 346
             V  
Sbjct: 855 EIVLE 859


>gi|118442987|ref|YP_878189.1| diaminopimelate decarboxylase [Clostridium novyi NT]
 gi|118133443|gb|ABK60487.1| diaminopimelate decarboxylase [Clostridium novyi NT]
          Length = 470

 Score =  178 bits (452), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 77/414 (18%), Positives = 147/414 (35%), Gaps = 53/414 (12%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           TP+Y+  ++++L N+D      KN A  K+  A K  +   + + + +      ++S+YE
Sbjct: 53  TPFYVYSQKEILRNIDEIKNAFKNHANTKIFYASKACSVMKILNIVKESGICVEANSIYE 112

Query: 63  VMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           V    +  F G+   +N     K+    A+ ++  +I  ++  +L+  ++   +L K   
Sbjct: 113 VRKCLDVGFTGDQIVFNGVVKKKEELEFAIKNDLYSINVDSFFELDIIEEITNRLQKNAN 172

Query: 120 LRINPSVSYSKFILADPNRPFS-RLGEKCKDK-------IESEIKNVNGLMFHNNCENKS 171
           + +    S S          F  + G   +D        I  +   + GL  H   +   
Sbjct: 173 VCVRIEPSVSSPTHPGLVTAFHAKSGIDLEDAENMCKKIINMKYVRLKGLHMHVGDQVPI 232

Query: 172 FLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDY-------------PVKDF 214
              F    + + KE          + + I++GGGI    K                  DF
Sbjct: 233 SEPFRKATEIMVKEAARLERVLNYKFDLINVGGGIPVPYKYERGNAQEDYLYGGINSYDF 292

Query: 215 CQRLKEFSEKYS--VQIYLEPGEAIVTNTTT---------------LNTTVLDISENIKN 257
              +     K+   ++I +EPG  IV++                   N  + D+ +    
Sbjct: 293 ASAIISEVHKWRKDIEICIEPGRKIVSSAAVLLTSISCEKTKTNYDENNNIQDVVDWKFI 352

Query: 258 LVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFH------FEKP 311
                   ++   D+  Y  +A+           V G  C  GD F +            
Sbjct: 353 DAGYSILSDSLHFDWYFYLLNASKTNEKYESLFKVAGPLCDGGDYFHQGVVGEFFALPNN 412

Query: 312 VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364
            ++GD ++F D   Y I  +  +N      + + N +G  + IR   SY D   
Sbjct: 413 TEVGDVLAFLDAGAYTIESQTVYNNRPRTAVVLINNEGKDELIRREDSYEDMLK 466


>gi|289548121|ref|YP_003473109.1| Orn/DAP/Arg decarboxylase 2 [Thermocrinis albus DSM 14484]
 gi|289181738|gb|ADC88982.1| Orn/DAP/Arg decarboxylase 2 [Thermocrinis albus DSM 14484]
          Length = 390

 Score =  178 bits (452), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 53/355 (14%), Positives = 113/355 (31%), Gaps = 18/355 (5%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP   +D + + +      Y      VK+  A+K      +   L +   G   +S  E+
Sbjct: 39  TPVLYMDLEGIKSRYIELRYHL--PQVKVYYAVKANDHPEIIRVLAELGSGFEVASSEEL 96

Query: 64  MLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
               E     +    +   K  +          D    ++ ++++K    A++    + L
Sbjct: 97  RRVLEMGVSPDRVISSNPVKPMDFIEYAYSKGVDRFAVDSFTEVDKLAKVAKRSRVYVRL 156

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF---SA 177
            +    S                     +    +     G+ FH   +  ++  +     
Sbjct: 157 VVPNEGSDWPLSKKF--GVDVNTALDILEYAREKGLIPYGVTFHVGSQCNNYRNWFIGIR 214

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP------VKDFCQRLKEFSEKYSVQIYL 231
               +  +      +++ ++LGGGI                     L++F      ++ +
Sbjct: 215 TAAELWSKAKERGLRLQMLNLGGGIPVRYTYEALSVEDIAYYVRGLLQKFFPSMPHELQI 274

Query: 232 EPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-YT 289
           EPG  IV +   + T V+  +    +N + +D+ V   + + L     A      G    
Sbjct: 275 EPGRGIVGDQGIMVTRVIGKARRGNENWIYIDTGVFNGLAEALGGIRYAFYLDREGELEE 334

Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344
             + G SC + D+          ++GD +       Y       FNG  +P +  
Sbjct: 335 WTIGGVSCDSMDVVARSVPLPEPEVGDYLYILSAGAYTTVYAANFNGFPVPQVVF 389


>gi|67923188|ref|ZP_00516676.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2
           [Crocosphaera watsonii WH 8501]
 gi|67854974|gb|EAM50245.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2
           [Crocosphaera watsonii WH 8501]
          Length = 404

 Score =  178 bits (452), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 59/377 (15%), Positives = 124/377 (32%), Gaps = 15/377 (3%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+     L + +                A        +    N    G  +++  +
Sbjct: 25  GSPLYVYQSDLLRHGISHITTSIPYNNTLFQFATVTNGNIELLKLFNDQGWGIHANTPGD 84

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ-KLHKKI 118
           + LG    F GE   Y+ +    +     +     T+  +++SQL    +  +       
Sbjct: 85  IYLGLKAGFSGEKIVYSGSNLNPEEMTQILKWGVRTLNLDSISQLELLYEIYKSFPGDLS 144

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
            L++   ++    I         +   +     +    N+ GL F+      +   F+ +
Sbjct: 145 SLKLGLRLNEPNLIKDSRIGVQPQEFPEAIKIAKRVGLNIQGLHFYRGTGTNATRAFTKV 204

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSEK--YSVQIYLE 232
           + +I  + G  +   E++  GGG  +        +    F Q L +   +    +Q+ +E
Sbjct: 205 IDDI-IQIGQLLPNWEYLDFGGGFGYPYHHDKIAFNWHKFGQELTDKLNQLSKPIQLIIE 263

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPNTGPYTAM 291
           PG A++ N  TL   V+ +       +I   +   ++    +       I       T  
Sbjct: 264 PGRAVIANCATLLAKVVSVKWQGDKQIIGVDTTVGNLSVPSVHGGYRKIISWPEKSQTLW 323

Query: 292 ---VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348
              VCG +  + D  G+      ++IGD I   +V  Y     + F     P   +   +
Sbjct: 324 LTDVCGNTTYSRDYLGKNCQLPALEIGDIIGILEVGAYGYAMSSHFLHRPRPAEVLLEKE 383

Query: 349 GTIKAIREFSYNDYYNN 365
                 +   Y    +N
Sbjct: 384 SHRLIRQREDYQVLIDN 400


>gi|256821372|ref|YP_003145335.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Kangiella koreensis DSM 16069]
 gi|256794911|gb|ACV25567.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Kangiella koreensis DSM 16069]
          Length = 408

 Score =  178 bits (452), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 50/376 (13%), Positives = 114/376 (30%), Gaps = 35/376 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP Y+ D+  +  N+D          V L  A+K      + + L+  +DG   +S  E
Sbjct: 35  QTPCYVYDRSVIKQNVDRLRRFF--PKVSLHYAIKANPMPAVVNYLSHQVDGLDVASAKE 92

Query: 63  VMLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           +             ++      + E+   + +  TI   ++++L +    A    +   +
Sbjct: 93  LHTALSTGISPSKVSFAGPGKSEQELTMAIFSGITINIESITELKRIITIADSHDRVANI 152

Query: 121 RINPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKS-- 171
            +  +     K           + G   +        +E    N  GL      +N +  
Sbjct: 153 ALRLNPDFELKSSGMKMGGGPQQFGIDVEQLDQVFELLEHPKLNFMGLHIFTGSQNLNAG 212

Query: 172 --FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKY 225
                 +++   + +    +   ++ +++GGG         K   ++   + L +  +++
Sbjct: 213 SIITAHNSIFALVARLHAEYGFSLKHLNIGGGFGIPYFPGDKLLDLEPIAENLNKLIDEH 272

Query: 226 S-----VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-------- 272
                  ++ LE G  +V N       + D   +     ++ +    H            
Sbjct: 273 QSLLNDCELILELGRYLVGNAGIYLCQITDKKVSRGQTYLIANGGLHHHLAASGNFGQVI 332

Query: 273 --LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                   A     +      + G  C   DI          +IGD ++      Y    
Sbjct: 333 RKNYPVAIANRMQQSDTELVNIVGPLCTPLDILANKMELPKAQIGDWVAVYQSGAYGFTA 392

Query: 331 KNW-FNGINMPTIAVK 345
               F     P   + 
Sbjct: 393 SPRDFLSHPHPVELLL 408


>gi|326202520|ref|ZP_08192388.1| Orn/DAP/Arg decarboxylase 2 [Clostridium papyrosolvens DSM 2782]
 gi|325987104|gb|EGD47932.1| Orn/DAP/Arg decarboxylase 2 [Clostridium papyrosolvens DSM 2782]
          Length = 417

 Score =  178 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 51/395 (12%), Positives = 113/395 (28%), Gaps = 33/395 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D +K+++               +  ++K     G+     +      ++S  E
Sbjct: 14  GTPVYVYDTEKIISQYTLLKNSLPQE-FGIFYSMKANPLVGICQLFKKLGSCIETASSGE 72

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
           +       F  +   +    K  +        D   I   ++ +       A K+ + + 
Sbjct: 73  LHAALSAGFSPDKIIFTSPGKTYDELEYAVETDIYSINIESLDEAEAINKIAAKIGRVVD 132

Query: 120 LRINPSVSYS-KFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCENKS 171
           + I  +  +         +   S+ G          K+        V G+  +   +  +
Sbjct: 133 ISIRINPDFDIAGSGIKMSGVASQFGIDQIHMESVFKELKTLTNLKVIGIHIYTGTQALN 192

Query: 172 FLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--- 224
                  ++ I +        +   + +++LGGG                L+    +   
Sbjct: 193 AHSIVQSMEQIIQLALETSEKYCFNLRFLNLGGGFGVPYFKDDSTLDMDILRNEFGQVWD 252

Query: 225 ------YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQE 277
                    Q+++E G  ++  + T  T VL       +  ++ D     H     L + 
Sbjct: 253 KYKDRLSDTQVFVESGRFLMAESGTYLTKVLYRKECKGRKYLVCDGGSNQHASSAFLGRH 312

Query: 278 S------ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                    +  +       V G  C   D+ G+         GD ++ E    Y I + 
Sbjct: 313 IRNNFPMHILNKSGYEEPVNVVGPLCTPTDVIGQNVTLPEAVAGDVVAIEKSGAYGITQS 372

Query: 332 NW-FNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              F    +P         T      +   D+   
Sbjct: 373 PGLFLSHPLPAEVQYYKGKTYILRERWEKEDFMLR 407


>gi|30248913|ref|NP_840983.1| Orn/DAP/Arg decarboxylase family protein [Nitrosomonas europaea
           ATCC 19718]
 gi|30138530|emb|CAD84820.1| Orn/DAP/Arg decarboxylases family 2 [Nitrosomonas europaea ATCC
           19718]
          Length = 391

 Score =  178 bits (450), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 57/354 (16%), Positives = 118/354 (33%), Gaps = 17/354 (4%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+ LID   + N             V+   A K      +  TL +   G   +S+ E+ 
Sbjct: 42  PFLLIDSNIIRNKARRFKTSMPR--VRPHYAAKANPDPRVLKTLIEEGVGFEIASIAELD 99

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           L            Y+   K             +  + +++ +L K      K   K+ LR
Sbjct: 100 LLMSLGVPAAEIFYSNPMKSRAYIEYAAAKGVEWYVLDSIEELRKIVSI--KPDAKLYLR 157

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           I+     S + LA           +  D+      ++ G+ FH   + ++   +   ++ 
Sbjct: 158 IDTPNIGSDWPLAGKFGTHLVDVSEIIDEAVRLKADLAGVTFHVGSQCRNPQNWRVGIER 217

Query: 182 IEKEFGHF---ITQIEWISLGGGIH--FTDKDYPVKDFCQRLKEFSEKYSVQIYL--EPG 234
            +  F        +   ++LGGG           ++   + + E        I++  EPG
Sbjct: 218 AQTVFASMREAGLKPRLLNLGGGYPVRHVKPIPSIEVIAEVINEAIADLPEDIHVMAEPG 277

Query: 235 EAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-YTAMV 292
             +V+++      V+  +    K  +  D+ +   + +         +    G      V
Sbjct: 278 RYLVSDSACFVCRVVGTATRNGKRWMYWDAGIFGGIIEVSEGLRYEILTQRNGSLIPWSV 337

Query: 293 CGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
            G +C + D+          ++  D I   +   Y  +  + FNG  +P + V 
Sbjct: 338 AGPTCDSVDVLMHDEMLPEDIQENDFIFIPNAGAYTTSYASNFNGFPLPDVVVI 391


>gi|256823045|ref|YP_003147008.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein
           [Kangiella koreensis DSM 16069]
 gi|256796584|gb|ACV27240.1| aspartate kinase [Kangiella koreensis DSM 16069]
          Length = 853

 Score =  178 bits (450), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 55/360 (15%), Positives = 116/360 (32%), Gaps = 25/360 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            Y+ +   +  N+     I      ++  A+K      +  T  +   G  + S++EV  
Sbjct: 498 AYIYNLAAVAENIKNLQSISAVD--QIFFAVKANNHPQVLTTAYEQGIGFETVSIFEVER 555

Query: 66  GHEKFGG---ETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
             E F         +   +         L     +  ++   L          +K I LR
Sbjct: 556 IKELFPAIDTNRIFFTPNFASHNEYQKALDYGVMLSLDSSYPLK--YWAKTFANKTIFLR 613

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLCF 175
           I+P+V              S+ G   ++       I+     V GL  H      +   +
Sbjct: 614 IDPNVGKGHHENVRTAGATSKFGIPIQELEELLPIIKEHNIKVLGLHAHAGSGILTNEHW 673

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-----YSVQIY 230
           +   + +          +++++LGGG    ++    +   +++ +   +        Q++
Sbjct: 674 AEHARLLA-SVAKQFPDVKYLNLGGGFGIKERAQQTELTMEQINQSLLEVKAQYPDHQLW 732

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATI----YPNT 285
           +EPG  IV NT  L + V  + +      + +++ + + +   L       +       +
Sbjct: 733 IEPGRYIVANTGVLVSKVTQVKQKQNYYYVGINTGMNSLMRPALYGSYHNIVNLSRMTES 792

Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
             + A V G  C + D  G          GD I  E+   Y       +N          
Sbjct: 793 KNHLATVVGPICESTDKLGIEIPFPDTFEGDLILIENAGAYGHVMSTHYNMRAPAEEVCL 852


>gi|312143556|ref|YP_003995002.1| Orn/DAP/Arg decarboxylase 2 [Halanaerobium sp. 'sapolanicus']
 gi|311904207|gb|ADQ14648.1| Orn/DAP/Arg decarboxylase 2 [Halanaerobium sp. 'sapolanicus']
          Length = 410

 Score =  178 bits (450), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 55/388 (14%), Positives = 116/388 (29%), Gaps = 32/388 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP+++ D++ ++  L+  +        K   A+K      +   + +   G  ++++ E
Sbjct: 19  GTPFHIYDERIIIERLNNLIDSFNWTDFKEYFAIKANPNPHILKIMKEMNCGVDAATVSE 78

Query: 63  VMLG-HEKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           + L     F G    +             +     I  +  +      +  +       +
Sbjct: 79  IKLAEKVGFSGTDIMFTSNLTTLDAYQYAVDRGAIINIDWAAD---IYELFENDIIPENI 135

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESE----IKNVN--GLMFHNNCENKSF-- 172
               +    +  +   +   S+ G   +   E+        +   GL             
Sbjct: 136 SFRLNPGSIENEI-MGDSKDSKFGSTAEQIKEAVSFLSKNGIKKLGLHTMVVSNENDPAI 194

Query: 173 --LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV--- 227
                  +     +    F  +IE+I++GGGI          D         + Y     
Sbjct: 195 FKDYTEMIFDFALELINEFGVEIEFINIGGGIGIPYLPEQNVDLKAIADSVYQSYKNIIL 254

Query: 228 ------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
                 +I+LE G  +   +  L T ++   E  K  + +D+S+   +   +        
Sbjct: 255 AEDLKPKIFLESGRYVTGESGYLVTKIIKEKETFKKYLGLDASMSDLMRPGMYGSYHHIT 314

Query: 282 ------YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                           V G  C   D F         K  D I   D   +       +N
Sbjct: 315 NIDAEERGEKETEIYDVVGSLCENNDKFAVNRKLPLSKKNDIIVIHDTGAHGHAMGFNYN 374

Query: 336 GINMPTIAVKNVDGTIKAIRE-FSYNDY 362
           G+   +  +   DG ++ IR   ++ DY
Sbjct: 375 GMLKNSEFLYTRDGKVRQIRRNETFEDY 402


>gi|242010362|ref|XP_002425937.1| Ornithine decarboxylase, putative [Pediculus humanus corporis]
 gi|212509920|gb|EEB13199.1| Ornithine decarboxylase, putative [Pediculus humanus corporis]
          Length = 456

 Score =  178 bits (450), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 62/363 (17%), Positives = 116/363 (31%), Gaps = 20/363 (5%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+++ D  +++   +          ++   A+KC     + + L         +S  E+ 
Sbjct: 35  PFFVCDVGEIVKKFNEWKVKFPR--IQPFYAVKCNDTPIVLEVLGALGSSFDCASKNELS 92

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
              +     +   +    K         +    +    ++   +K K+     ++ LRI 
Sbjct: 93  KVLDLGVDPKKIIFANPCKPISHIRFAESNKVDLITFDNETELYKMKSLFPESRLILRIR 152

Query: 124 PSVSYSKFILADPNRPFS-RLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
                +   L         +   K  +   S   NV GL FH          +   +   
Sbjct: 153 YDAKVAACQLGMKFGCDHQKEAPKLINVARSLGLNVVGLSFHVGSGCGDPPVYRKAIAAC 212

Query: 183 EKEFGHF---ITQIEWISLGGGIH---FTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
           +  F +          + +GGG      T  D   +   Q L++F     ++I  EPG  
Sbjct: 213 KTLFDYAKTLGYDFNILDIGGGFPGNKHTSVDEFAEIINQALEDFFPDPEMKIIAEPGRF 272

Query: 237 IVTNTTTLNTTV---------LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287
           +  +  TL T V           I         V  S  + + D+           N   
Sbjct: 273 MAASCFTLVTNVHSKRTVLGENGIHNMYYINDGVYGSFNSIIYDHAHVNPIPLRQSNLKN 332

Query: 288 YTA-MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
            T   + G +C   D   +      + IGD I FED+  Y +   + FNG  +P + V  
Sbjct: 333 VTYASIWGPTCDGLDQVCDNVLLPELTIGDWIVFEDMGAYTLPGASTFNGFPVPKVYVVA 392

Query: 347 VDG 349
            + 
Sbjct: 393 SEN 395


>gi|319786420|ref|YP_004145895.1| aspartate kinase [Pseudoxanthomonas suwonensis 11-1]
 gi|317464932|gb|ADV26664.1| aspartate kinase [Pseudoxanthomonas suwonensis 11-1]
          Length = 874

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 50/366 (13%), Positives = 108/366 (29%), Gaps = 26/366 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+     +         +      +   A+K      + + L +   G    SL E
Sbjct: 511 GTPRYVYHLPTVRERARQLKELAAVD--RRYYAIKANPHPAILNALAEEGFGLECVSLAE 568

Query: 63  VMLGHE---KFGGETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           +                +  ++    E +  L+   T+  + V  L  + +      + +
Sbjct: 569 IRHVFAVVPGIDPARVLFTPSFAPREEYEQALALGVTVTVDNVELLRNWPE--TFRGRSL 626

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSF 172
            LRI+           +     ++ G   +   E   +       + GL  H     ++ 
Sbjct: 627 WLRIDLGHGDGHHEKVNTGGKEAKFGLSAQRVDEFVQEARGLGVVITGLHAHLGSGVENM 686

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-----DFCQRLKEFSEKYSV 227
             +  M   +      F   +  + +GGG+                     +  +   + 
Sbjct: 687 GHWRQMCDELAGFARRFG-TVATLDIGGGLPIPYAPEDEPFDLEAWAASLAEVRAVHPAF 745

Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286
            + +EPG  +V     L       + ++    V +D+ + A V   +       +     
Sbjct: 746 GLVIEPGRFLVAEAGVLLARATQVVEKDGVVRVGLDAGMNALVRPAMYDAWHDIVNLQRI 805

Query: 287 PYT----AMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                    V G  C + D+FG+          GD +   D   Y  +  + +N   +P 
Sbjct: 806 DAPADGQFDVVGPICESSDLFGKRRRLPRDTAAGDVMLVADAGAYGHSMASRYNLRELPP 865

Query: 342 IAVKNV 347
             V + 
Sbjct: 866 EDVIDG 871


>gi|86475640|emb|CAG77429.1| putative glutamate decarboxylase [Bacillus circulans]
          Length = 436

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 62/400 (15%), Positives = 120/400 (30%), Gaps = 39/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+YL D   +  +       R N  ++  L+LK      +     Q+  G   +S  E
Sbjct: 24  ETPFYLYDGDFIEAHYRQLRS-RTNPAIQFYLSLKANNNIHLAKLFRQWGLGVEVASAGE 82

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + L     F  E   ++     +     AV S    II  +V +L   ++ A+K +K   
Sbjct: 83  LALARHAGFSAENIIFSGPGKKRSELEIAVQSGIYCIIAESVEELFYIEELAEKENKTAR 142

Query: 120 --LRINPSVSYSKFILAD-----PNRPFSRLGEKCKDKIESEIK-NVNGLMFHNNCENKS 171
             +RINP  S+    +              + +   D + S       G+  +   +N +
Sbjct: 143 VAIRINPDKSFGSTAIKMGGVPRQFGMDESMLDAVMDAVRSLQFTKFIGIHVYTGTQNLN 202

Query: 172 ----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
                      +      +  +    E I+LGGG       +       ++      Y  
Sbjct: 203 TDSIIESMKYTVDLGRNIYERYGIVCECINLGGGFGVPYFSHEKALDIGKITRTVSDYVQ 262

Query: 226 --------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH--------- 268
                        +E G  ++       T VL    +   + ++      H         
Sbjct: 263 EARDTRFPQTTFIIESGRYLLAQAAVYVTEVLYRKASKGEVFVIVDGGMHHHAASTFRGR 322

Query: 269 -VPDYLLYQESATIYPNTGPY--TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
            +      +       +         + G  C   D  G+      +  GD +   +   
Sbjct: 323 SMRSNYPMEYIPVREDSGRRELEKVTIAGPLCTPEDCLGKDVHVPALYPGDLVCVLNSGA 382

Query: 326 YNINRKN-WFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y ++     F G   P   +K         R+ + +D   
Sbjct: 383 YGLSFSPVHFLGHPTPIEILKRNGSYELIRRKGTADDIVA 422


>gi|284992534|ref|YP_003411088.1| diaminopimelate decarboxylase [Geodermatophilus obscurus DSM 43160]
 gi|284065779|gb|ADB76717.1| diaminopimelate decarboxylase [Geodermatophilus obscurus DSM 43160]
          Length = 496

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 57/411 (13%), Positives = 115/411 (27%), Gaps = 51/411 (12%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +++D+    +    A +        +  A K F    +   +        + S  E
Sbjct: 60  GTPLFVLDEGDFRS--RAADFAAAFTDADVHYASKAFLCGQIARWIADDGLHLDACSGNE 117

Query: 63  VMLGHE-KFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL----- 114
           + L     F     A +   K       AV +    ++ ++  ++++    A        
Sbjct: 118 LALALAAGFPAGRIALHGNNKSLVELQLAVDAGIGHVVLDSFDEVDRLVPLAAARVAAGG 177

Query: 115 -HKKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFH 164
               + +R    +               + G               I      + GL  H
Sbjct: 178 APVPVLIRTTVGIEAHTHEFIATAHEDQKFGFSLATGDALTAAVRVIREPALRLTGLHSH 237

Query: 165 NNCENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDF------ 214
              +      F A    +    G         +  ++LGGG                   
Sbjct: 238 IGSQIFDTAGFEAAAHRVVGLLGQVRQATGEVLGELNLGGGFGIAYLPGDDPVSPGDVAR 297

Query: 215 -----CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-----------NIKNL 258
                     +       ++ +EPG AI    T     +  I              ++N 
Sbjct: 298 RLRSAVAAECDALGLPVPRLAVEPGRAIAGPGTVTLYEIGTIKPVRLGSGGQGAPQVRNY 357

Query: 259 VIVDSSVEAHVPDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEK-PVK 313
           V VD  +  ++   L       +  N      P    V G+ C +GDI     +    V+
Sbjct: 358 VSVDGGMSDNIRTALYDASYTCVLANRESDAPPALCRVVGKHCESGDILVRDLWLPADVQ 417

Query: 314 IGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            GD ++      Y  +  + +N +  P +         + +R  + +D + 
Sbjct: 418 PGDLLAVAATGAYCWSMASNYNYLLKPPVVAVRDGAATEIVRRQTLSDVFA 468


>gi|116668430|pdb|2J66|A Chain A, Structural Characterisation Of Btrk Decarboxylase From
           Butirosin Biosynthesis
 gi|70720851|dbj|BAE07075.1| BtrK [Bacillus circulans]
          Length = 428

 Score =  177 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 62/400 (15%), Positives = 120/400 (30%), Gaps = 39/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+YL D   +  +       R N  ++  L+LK      +     Q+  G   +S  E
Sbjct: 16  ETPFYLYDGDFIEAHYRQLRS-RTNPAIQFYLSLKANNNIHLAKLFRQWGLGVEVASAGE 74

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + L     F  E   ++     +     AV S    II  +V +L   ++ A+K +K   
Sbjct: 75  LALARHAGFSAENIIFSGPGKKRSELEIAVQSGIYCIIAESVEELFYIEELAEKENKTAR 134

Query: 120 --LRINPSVSYSKFILAD-----PNRPFSRLGEKCKDKIESEIK-NVNGLMFHNNCENKS 171
             +RINP  S+    +              + +   D + S       G+  +   +N +
Sbjct: 135 VAIRINPDKSFGSTAIKMGGVPRQFGMDESMLDAVMDAVRSLQFTKFIGIHVYTGTQNLN 194

Query: 172 ----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
                      +      +  +    E I+LGGG       +       ++      Y  
Sbjct: 195 TDSIIESMKYTVDLGRNIYERYGIVCECINLGGGFGVPYFSHEKALDIGKITRTVSDYVQ 254

Query: 226 --------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH--------- 268
                        +E G  ++       T VL    +   + ++      H         
Sbjct: 255 EARDTRFPQTTFIIESGRYLLAQAAVYVTEVLYRKASKGEVFVIVDGGMHHHAASTFRGR 314

Query: 269 -VPDYLLYQESATIYPNTGPY--TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
            +      +       +         + G  C   D  G+      +  GD +   +   
Sbjct: 315 SMRSNYPMEYIPVREDSGRRELEKVTIAGPLCTPEDCLGKDVHVPALYPGDLVCVLNSGA 374

Query: 326 YNINRKN-WFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y ++     F G   P   +K         R+ + +D   
Sbjct: 375 YGLSFSPVHFLGHPTPIEILKRNGSYELIRRKGTADDIVA 414


>gi|325293061|ref|YP_004278925.1| Diaminopimelate decarboxylase [Agrobacterium sp. H13-3]
 gi|325060914|gb|ADY64605.1| Diaminopimelate decarboxylase [Agrobacterium sp. H13-3]
          Length = 440

 Score =  177 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 45/387 (11%), Positives = 97/387 (25%), Gaps = 35/387 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +L D   +                 +  ++K      +     Q   G   +S+ E
Sbjct: 56  GTPCFLYDASAMRRAYRDLATALSGF-ADIYYSVKANPLPAIVSLFRQEGAGAEIASVGE 114

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
                      E   +    K      + + S    I   +  ++ + +   + +   I 
Sbjct: 115 YRAAIKAGIPPENIIFAGPGKRQAELLEVIESGTGEIHIESAEEITRIEAIGRPVKASIR 174

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE----IKNVNGLMFHNNCENKSFLCF 175
           +   P        +      F    E+ ++ +         N+ G+  +   +       
Sbjct: 175 INPVPDAQAGAMRMGGKATAFGFDEEELENVLPLFRDIRHINLVGVHIYGGTQILDADML 234

Query: 176 SAMLKNI----EKEFGHFITQIEWISLGGGIHFTDKDY-----------PVKDFCQRLKE 220
            +  ++      +        +E I LGGG+                   + D    ++ 
Sbjct: 235 VSQWRHSILLAARMAEMLGRPLETIDLGGGLGIPYFAGETPLDLAAVSAAIPDLKALVQA 294

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-------- 272
                   I +EPG  +          V  +  +     +V      H            
Sbjct: 295 HPLIADAHIIVEPGRFLAGPGGIYVAEVNSVKTSRGTTFVVTDGGMHHHLAASGNLGQIV 354

Query: 273 --LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                  +  +       TA + G  C   D          +K GD ++      Y    
Sbjct: 355 KRNYPIVAPAMMQADYEETATIVGPLCTPLDTLARNAALPKLKAGDLLAILQSGAYGATA 414

Query: 331 K-NWFNGINMPTIAVKNVDGTIKAIRE 356
             + F         +   +G  + I  
Sbjct: 415 SPSGFLSHPAAKEVLV-ENGAFEVIGR 440


>gi|311743945|ref|ZP_07717751.1| diaminopimelate decarboxylase [Aeromicrobium marinum DSM 15272]
 gi|311313075|gb|EFQ82986.1| diaminopimelate decarboxylase [Aeromicrobium marinum DSM 15272]
          Length = 469

 Score =  177 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 56/407 (13%), Positives = 116/407 (28%), Gaps = 47/407 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+                A   +  A K F +      + +        +  E
Sbjct: 61  GTPLYVLDEDDFRRRARAFREAFDTAD--VYYAGKAFLSVATARWVAEEGLNLDVCTGGE 118

Query: 63  VMLGHEK-FGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + +     F       +   K       A+      II ++V ++++     ++L     
Sbjct: 119 LAVAMAADFPPARIGLHGNNKSVAELRRALELGVGRIIVDSVEEIDRLVGLTEELGVTAR 178

Query: 120 LRINP--SVSYSKFILADPNRPFSRLGEKC--------------KDKIESEIKNVNGLMF 163
           + +     V               + G                 +  + +    + GL  
Sbjct: 179 VMVRVTAGVEAHTHEYISTAHEDQKFGFSIHGREGRPSDALQAVRRIVAAPGLKLLGLHS 238

Query: 164 HNNCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD-----KDYPVKDF 214
           H   +      F      +L+   +        +    LGGG            +P    
Sbjct: 239 HIGSQIFVTDGFEVAARRVLRLQAEIERELGVTLPEFDLGGGFGIAYTTQDDPRHPQDLA 298

Query: 215 CQRLKEFSEKYSVQIY------LEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVD 262
            + +K   ++            +EPG AIV  +T     V    E        +  V VD
Sbjct: 299 REMVKIVHDECGALDIGVPKLSIEPGRAIVGPSTFTLYEVGTTKEVALDGGASRRYVAVD 358

Query: 263 SSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDR 317
             +  ++   L   +     A+         + V G+ C +GDI  +  +    V  GD 
Sbjct: 359 GGMSDNIRTALYSADYSATLASRSSEAPAVLSRVVGKHCESGDIVVKDEYLPADVAAGDL 418

Query: 318 ISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           ++      Y  +  + +N +    +           +R  + +D   
Sbjct: 419 VAVPGTGAYCRSLASNYNHVPRAAVVAVREGEARLILRRETEDDLLR 465


>gi|220929910|ref|YP_002506819.1| Orn/DAP/Arg decarboxylase 2 [Clostridium cellulolyticum H10]
 gi|220000238|gb|ACL76839.1| Orn/DAP/Arg decarboxylase 2 [Clostridium cellulolyticum H10]
          Length = 416

 Score =  177 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 46/395 (11%), Positives = 114/395 (28%), Gaps = 33/395 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y  D +K+++             + +  ++K     G+     +   G  ++S  E
Sbjct: 14  GTPVYAYDTEKIMSQYALLKNSLPQE-IGIFYSMKANPLLGICQLFKKLGSGIETASSGE 72

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
           +       F  E   +    K  +            I   ++ +     + A K  + + 
Sbjct: 73  LHTALCAGFPPEKIIFTSPGKTYDELKYAVETGIYSINIESLEEAEVINEIADKKGRVVD 132

Query: 120 LRINPSVSY--------SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS 171
           + I  +  +           + +       RL     +    +  N+ G+  +   +  +
Sbjct: 133 ISIRINPDFDIAGSGIKMSGVASQFGIDQIRLDSVLNELKALQNLNIMGIHIYTGTQALN 192

Query: 172 ----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--- 224
                     ++K        ++ ++++++LGGG                L+    +   
Sbjct: 193 AHSIVQSMEQIVKLALDTSEKYVFKLKFLNLGGGFGVPYFKDDSTLDMDILRNEFSEMWN 252

Query: 225 ------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-------IVDSSVEAHVPD 271
                 ++ Q+++E G  ++  + T  T +L   E                ++       
Sbjct: 253 KYKDRLFNTQVFVESGRFLMAESGTYLTKILYRKECKGRKYLVCDGGSNQHAASAFLGRH 312

Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                    +  ++      V G  C   D+ G+         GD ++      Y + + 
Sbjct: 313 IRNNFPIQILNKSSNEEQVNVVGPLCTPTDVIGQNVMLPEAVPGDIVAVLKSGAYGVTQS 372

Query: 332 NW-FNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              F    +P         T      +   D+   
Sbjct: 373 PGLFLSHPLPAEVQYYEGKTYILRERWGKEDFMLR 407


>gi|289582392|ref|YP_003480858.1| diaminopimelate decarboxylase [Natrialba magadii ATCC 43099]
 gi|289531945|gb|ADD06296.1| diaminopimelate decarboxylase [Natrialba magadii ATCC 43099]
          Length = 411

 Score =  177 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 47/379 (12%), Positives = 105/379 (27%), Gaps = 22/379 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D  ++  N             +++ A K      + + + +       ++  E
Sbjct: 29  DTPLYVTDLDRVKENYTRFASAF--PDAEVMYAAKAHTGKAVLEAVLEAGGEIECAAWGE 86

Query: 63  VML-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN---TVSQLNKFKDKAQKLHKKI 118
           +           T  Y             ++          T+   +     A++ +   
Sbjct: 87  LQRSIDAGADPNTLQYTAVNPPDHDLDYATDLAAENPGLTITIGATDTLDRLAERGYDGR 146

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK-----IESEIKNVNGLMFHNNCENKSFL 173
                     +           ++ G              E  ++ GL  H      +  
Sbjct: 147 IAIRINPGIGTGHHEKVATGADAKFGIPYDRVPEVADRVREEFDLVGLHAHAGSGVLTEG 206

Query: 174 CFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVK----DFCQRLKEFSEKYS 226
                       E         +E++ +GGG     ++             +++      
Sbjct: 207 LEEHCRAIERVGEMARRVGDEDLEFVDVGGGYGVPYREDDEPLDLEKTSNMVRDAVGDLE 266

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATI---Y 282
             + LEPG  +V + + + + V  I E     V+ +D+S+   +   +            
Sbjct: 267 ATLKLEPGRYVVADASVILSEVNTIKEAPDTTVVGIDASLATLIRPAMFGSYHPMYNVSA 326

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
           P+  P+   V G  C + D+F         +  D I+  +   Y     + F+    P  
Sbjct: 327 PDREPHEVTVGGPVCTSADVFAHDRPVARPEREDIIAIGNAGSYGYELASQFHSQPRPAE 386

Query: 343 AVKNVDGTIKAIREFSYND 361
                       R  + +D
Sbjct: 387 VALENGEARVVRRRETLDD 405


>gi|145355995|ref|XP_001422228.1| Diaminopimelate decarboxylase [Ostreococcus lucimarinus CCE9901]
 gi|144582468|gb|ABP00545.1| Diaminopimelate decarboxylase [Ostreococcus lucimarinus CCE9901]
          Length = 471

 Score =  176 bits (447), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 58/402 (14%), Positives = 116/402 (28%), Gaps = 43/402 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D+  L      A       G+ +  A+K      +  T  +      +SS YE
Sbjct: 68  GTPTYVYDRATLDAQAARARAFPNAYGLTVRYAMKASPNAAILKTFKKAGLHVDASSGYE 127

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                   F G   + +        + ++     +   ++ QL +F         ++G+R
Sbjct: 128 CERAMKAGFEGGEISLSTQELPRFFEDLVRRGVKVNACSLDQLERFGRA--FPGGEVGVR 185

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCK------DKIESEIKNVNGLMFHNNCENKSFLCF 175
            NP +        +   P S  G   +      + +E     V  +  H    +   +  
Sbjct: 186 FNPGLGSGGTGKTNVGGPSSSFGIWFESLPRVKEIVEQYDLKVVRVHTHIGSGSDPAVWQ 245

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY----- 230
                 +  +       ++ ++LGGG       Y        +    ++           
Sbjct: 246 KVSG--MSLDLCREFPSVDTLNLGGGYKVGRMSYEKSTDLAVVGVPVKEAFEAFAKETGR 303

Query: 231 -----LEPGEAIVTNTTTLNTTVLDISENIKNLVIVD----SSVEAHVPDYLLYQESATI 281
                +EPG  ++ N+  + T+V D                  +   +   L   +   +
Sbjct: 304 KLKLEIEPGTFLLANSCAVVTSVQDKVVTGTAEGHTFLKLDMGMTEVLRPSLYGSQHPLV 363

Query: 282 YPNTGPY------TAMVCGRSCLAGDIF---------GEFHFEKPVKIGDRISFEDVAGY 326
             +            +V G  C +GD+                  V IGD +  E    Y
Sbjct: 364 SVSKAGELPAAQADYVVVGHCCESGDLLTPAPDEPETISERRMGEVNIGDYVVIEGSGAY 423

Query: 327 NINRKN-WFNGINMPTIAVKNVDGT--IKAIREFSYNDYYNN 365
                +  +N        ++  DG       R+ +      N
Sbjct: 424 CAGMSSKNYNSFPEAPEVMRLADGAGFAVIRRKQTLEQILAN 465


>gi|33519728|ref|NP_878560.1| diaminopimelate decarboxylase [Candidatus Blochmannia floridanus]
 gi|33504073|emb|CAD83334.1| diaminopimelate decarboxylase [Candidatus Blochmannia floridanus]
          Length = 425

 Score =  176 bits (447), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 59/398 (14%), Positives = 120/398 (30%), Gaps = 45/398 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +  D   ++N ++            +  A K  +   +   +N       + SL E+ 
Sbjct: 28  PVWAYDASIIINRINQLKQFDV-----IRFAQKSCSNIHILKLMNNNGVKIDAVSLGEIE 82

Query: 65  LGH-EKFGGET----HAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
                 F  +       +     + +    +     I  N  S     +  +     KI 
Sbjct: 83  RALLAGFKSDNEDSEIVFTADIFENDTLLKIVELG-IPVNIGSIDMLIQLGSCSPRHKIW 141

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCENKSFL 173
           LRINP   Y      +     S+ G   +D   +          + G   H         
Sbjct: 142 LRINPGFGYGHNYKTNTGGENSKHGIWHEDIPTALFYIRYYNLRLIGFHMHVGSGVHYDH 201

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--------- 224
                   +++ F +    ++ IS GGG+    + +              K         
Sbjct: 202 LLKVSYAMVQQVFKYT-EDLQAISAGGGLTVPYESHEKPVDVNNYFNIWNKARQEISQCL 260

Query: 225 -YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESA--- 279
            + +Q+ +EPG  +V  +  L T +  +     +N V++D+     +   +         
Sbjct: 261 GHKIQLEIEPGRFLVAESGILITQICAVKRMGRRNFVLIDAGYNDLMRPVMYGSYHHISL 320

Query: 280 -----TIYPNTGPYTAMVCGRSCLAGDIFGEF-------HFEKP-VKIGDRISFEDVAGY 326
                           ++ G  C +GDIF +              +KIGD + F D   Y
Sbjct: 321 IPGDNRNIMFDKLNDIIIGGPLCESGDIFTQNSYGEVLPRKLPDSLKIGDYLIFHDTGAY 380

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             +  + +N   +    +       +  R+    D ++
Sbjct: 381 GASMSSNYNTRPLLPEVLWENGEIRQIRRKQRLEDLFS 418


>gi|270157152|ref|ZP_06185809.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein
           [Legionella longbeachae D-4968]
 gi|289164443|ref|YP_003454581.1| diaminopimelate decarboxylase, aspartate kinase (fusion of lysA and
           lysC) [Legionella longbeachae NSW150]
 gi|269989177|gb|EEZ95431.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein
           [Legionella longbeachae D-4968]
 gi|288857616|emb|CBJ11456.1| putative diaminopimelate decarboxylase, aspartate kinase (fusion of
           lysA and lysC) [Legionella longbeachae NSW150]
          Length = 853

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 56/363 (15%), Positives = 111/363 (30%), Gaps = 25/363 (6%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           +P Y+             L   K+    L  A+K      +  T+ +   G    S+ E+
Sbjct: 496 SPCYVYHNPTQAAKAKQLL-ALKSIDA-LFYAIKANPHPAILKTMEKEGIGFECVSIQEL 553

Query: 64  MLGHEKFG---GETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIG 119
               E F         +   +          N    I  +++  L ++ +     ++++ 
Sbjct: 554 DRVVELFPDIDKNRILFTPNFAPKTEYEYALNIGCYITIDSLYPLERWPEL--FKNREVI 611

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE------SEIKNVNGLMFHNNCENKSFL 173
           +RI+P                S+ G    D  +           V GL  H+     +  
Sbjct: 612 IRIDPGTGAGHHKHVSTGGNESKFGITQNDIEQVVALTKKNNIQVVGLHAHSGSGILTPE 671

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSEKYSV-Q 228
            +     ++         Q + I+LGGG+   +K         +    L     +Y   +
Sbjct: 672 LW-QQTASMLASLTEQFPQAKSINLGGGLGVVEKPGQQPLDFVNLDALLMAVKSRYPQIK 730

Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESATI----YP 283
           I+LEPG   V  +  +   V    E  K   I +++ + + +   L       +      
Sbjct: 731 IWLEPGRFFVAESGVILAKVTQCKEKGKVKFIGIETGMNSLIRPSLYGSYHEIVNLSRLY 790

Query: 284 NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343
                 + + G  C +GD  G        + GD +   +   Y     + +N        
Sbjct: 791 EEKAGFSHIVGPICESGDTLGYDRLLPVTEEGDVLLIANTGAYGRCMSSHYNLRPPAQEI 850

Query: 344 VKN 346
           V  
Sbjct: 851 VLE 853


>gi|24213747|ref|NP_711228.1| diaminopimelate decarboxylase [Leptospira interrogans serovar Lai
           str. 56601]
 gi|45658455|ref|YP_002541.1| diaminopimelate decarboxylase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|24194569|gb|AAN48246.1| diaminopimelate decarboxylase [Leptospira interrogans serovar Lai
           str. 56601]
 gi|45601698|gb|AAS71178.1| diaminopimelate decarboxylase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 422

 Score =  176 bits (446), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 58/396 (14%), Positives = 133/396 (33%), Gaps = 35/396 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++  ++++  + + AL      G+ +  A+K      + + + +      +SS YE
Sbjct: 23  GTPVFVYSRERIEKSCEVALAFPNAYGLTVRYAMKANPNRTVLEIMKRKGIQIDASSEYE 82

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           V+   H  F  E            +  ++         ++ QL  F +      K++ +R
Sbjct: 83  VLRAIHYGFKPEQIMLTSQELAKGLKELVEKGVVFNACSLRQLETFGNL--FPGKEVSVR 140

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDK----IESEIKNVNGLMFHNNCENKSFLCFSA 177
            NP +   +    D     S  G   +D       +   ++     H +  + S      
Sbjct: 141 FNPGLGSGQTKKTDVGGKTSSFGIWYEDINQVKEIASKFDLKIFKVHTHIGSGSDPEVWK 200

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY------- 230
           ++  +  +     ++ + ++LGGG      +       Q++     +   +         
Sbjct: 201 VVAQVSLDIAAQFSECKILNLGGGFKVGRMEDEKTTDFQKIGPPVVELFQEFAKKHGTEL 260

Query: 231 ---LEPGEAIVTNTTTLNTTVLDISENIKNLVIV---DSSVEAHVPDYLLYQESATIYPN 284
              +EPG  ++ N  ++ TTV D+             D+ ++ +    L   +   +  +
Sbjct: 261 RLEIEPGSFLMVNNGSILTTVDDVVSTGPGGYTFVKLDAGMDVNTRPSLYAAKHPLVVVS 320

Query: 285 T------GPYTAMVCGRSCLAGDIFGE-------FHFEKPVKIGDRISFEDVAGYNINRK 331
                       +  G  C +GD+F +              K+GD +  E    Y  +  
Sbjct: 321 KEGVHSGKTADYVYVGHCCESGDLFTQAEGGGPITRITGEAKLGDYVVMEGAGAYCSSMS 380

Query: 332 N-WFNGINMPTIAVKNVDGTI-KAIREFSYNDYYNN 365
              +N        + + DG+     R  ++   + N
Sbjct: 381 TKNYNSFPETAEVLVDSDGSFQLIRRRQNWEQIFQN 416


>gi|284050162|ref|ZP_06380372.1| Orn/DAP/Arg decarboxylase 2 [Arthrospira platensis str. Paraca]
 gi|291572167|dbj|BAI94439.1| diaminopimelate decarboxylase [Arthrospira platensis NIES-39]
          Length = 409

 Score =  176 bits (446), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 53/370 (14%), Positives = 123/370 (33%), Gaps = 13/370 (3%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+ D + L   ++           +   A     +  +     Q   G  +++  +
Sbjct: 32  GSPLYVYDAEILQETINHIGGAVNYPKTRFKFASVTNGSIALLKIFQQANWGLHANTPGD 91

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
             LG    F  +   Y+ +  +     +L N        +++ QL  F +  Q+L     
Sbjct: 92  AFLGLKAGFHPQQIVYSGSNLNHREFQLLLNWGITTYNLDSLDQLQLFGEVFQQLKPDFL 151

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
            ++   ++  K           +   +      S    ++GL F+      +   F+ ++
Sbjct: 152 PKLGFRLNLPKINGDSRIGVNPQEFPEAIKIASSAGLKISGLHFYRGTGTNATSSFTQVI 211

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSE--KYSVQIYLEP 233
           K      G  +   +++  GGG  +  +     +  + F +++          + + +EP
Sbjct: 212 K-PLLAIGQQLPDWQYLDFGGGFGYPYQHQKSAFDWQLFGEQITAELNQLDREIDLIIEP 270

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPNTGPYTA-- 290
           G + + +  TL T V+         ++   +  A++    +       +  +  P     
Sbjct: 271 GRSAIASCGTLLTQVVSTKWQSPKQIVGVDTTVANLSVPSVYGNYREIVPFSDTPNHYIT 330

Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGT 350
            VCG +  + D  G+      +K GD ++  D   Y     + F     P   +      
Sbjct: 331 DVCGNTTYSRDYLGKNRQLPQLKRGDILAILDCGAYGYAMSSHFLHRPRPAEVLLKQGKH 390

Query: 351 IKAIREFSYN 360
               +   YN
Sbjct: 391 QLIRQREDYN 400


>gi|50954436|ref|YP_061724.1| diaminopimelate decarboxylase [Leifsonia xyli subsp. xyli str.
           CTCB07]
 gi|50950918|gb|AAT88619.1| diaminopimelate decarboxylase [Leifsonia xyli subsp. xyli str.
           CTCB07]
          Length = 471

 Score =  176 bits (446), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 53/410 (12%), Positives = 107/410 (26%), Gaps = 47/410 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA------GVKLLLALKCFAAWGMFDTLNQYMDGTT 56
            TP Y++D+ ++           + A        K+  A K F +  +   +        
Sbjct: 53  GTPLYVVDEAEVRERAADVRAAFQEAFAGVGTAAKVYYAGKAFLSIEVARWMAGAGLNID 112

Query: 57  SSSLYEVMLGHEKFGG-ETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKA-- 111
             S  E+ +        +   ++   K        V +    I+ ++V ++++    A  
Sbjct: 113 VCSGGELAVALAAGVAADRLGFHGNNKSEAEIEAAVSAGVGAIVIDSVQEIDRVAAAASR 172

Query: 112 QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFH 164
             + + + LR+N  V               + G    D         E       GL  H
Sbjct: 173 HGVVQPVRLRVNSGVHAHTHAFLATAHDDQKFGIALPDAAAAVARIREHGSLAFLGLHGH 232

Query: 165 NNCENKSFLCFSAMLKNIEKEFGH--FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
              +      F+     +            +  ++LGGG                L    
Sbjct: 233 IGSQIFGADGFAESASRLLAVHRELLAGGDVPELNLGGGFGIAYTAADDPAPIAELAHRI 292

Query: 223 EKYSVQIY-----------LEPGEAIVTNTTTLNTTVL---------------DISENIK 256
            +                  EPG +I+        TV                 +   + 
Sbjct: 293 AETVAASCTRLGIPLPVVAFEPGRSIIGRAGLTLYTVGTTKEVLAAAQDGGETAVRRYVS 352

Query: 257 NLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIG 315
               +  +    + +       A       P    V G+ C +GDI     +       G
Sbjct: 353 VDGGMSDNARPALYEADYSARIAGRVSAAPPVLVRVAGKHCESGDIVVHAEYLPADTAPG 412

Query: 316 DRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           D ++      Y     + +N +  P +           ++  S  D    
Sbjct: 413 DLLAVPATGAYCWTLASNYNYLGRPAVVAVRDGEARVIVKGESIEDLLAR 462


>gi|82703085|ref|YP_412651.1| Orn/DAP/Arg decarboxylase 2 [Nitrosospira multiformis ATCC 25196]
 gi|82411150|gb|ABB75259.1| ornithine decarboxylase [Nitrosospira multiformis ATCC 25196]
          Length = 391

 Score =  176 bits (446), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 63/354 (17%), Positives = 121/354 (34%), Gaps = 17/354 (4%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+ L+D   + N             V+   A+K      +  TL +   G   +S+ E+ 
Sbjct: 42  PFLLVDSNIIRNKARRFKAAMPR--VQPHYAVKANPDPRVLKTLIEEGVGFEIASISELD 99

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           L            Y+   K             +  + ++V +L K    + K   K+ LR
Sbjct: 100 LLLSLNVPAADIYYSNPMKSRAYLEYAAAKGVEWYVLDSVEELRKI--VSVKPDAKLYLR 157

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           I+     S + LA          ++  D+  +   ++ G+ FH   + ++   +   ++ 
Sbjct: 158 IDTPNIGSDWPLAGKFGTHVAEIKEIIDEAANLQADLAGVTFHVGSQCRNPQNWRVGIER 217

Query: 182 IEKEFGHF---ITQIEWISLGGGIH--FTDKDYPVKDFCQRLKEFSEKYSVQIYL--EPG 234
             K F            +++GGG           ++   + + E        I +  EPG
Sbjct: 218 AIKVFADMRQAGLSPRLLNIGGGYPVRHVKPIPSIEVIGEVVNEAIANLPENIRIMAEPG 277

Query: 235 EAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-YTAMV 292
             +V++       V+  +    K  +  D+ V   V +         +   TGP     V
Sbjct: 278 RYLVSDAAYFVCRVVGTATRNGKRWMYWDAGVFGGVIEVTEGLRYEILSDRTGPSIPWSV 337

Query: 293 CGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
            G +C + DI          ++ GD I   +   Y     + FNG  +P + V 
Sbjct: 338 AGPTCDSVDILMRDELLPEDIEEGDFIYIPNAGAYTTAYASNFNGFPLPEVVVL 391


>gi|261757576|ref|ZP_06001285.1| LOW QUALITY PROTEIN: orn/DAP/Arg decarboxylase [Brucella sp. F5/99]
 gi|261737560|gb|EEY25556.1| LOW QUALITY PROTEIN: orn/DAP/Arg decarboxylase [Brucella sp. F5/99]
          Length = 306

 Score =  176 bits (446), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 152/250 (60%), Positives = 187/250 (74%)

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
            GLR+NP VS S F LADP RPFSRLGE    K+E  +  + G M HNNCEN  F  F  
Sbjct: 57  RGLRLNPGVSSSSFDLADPARPFSRLGEWDVAKVEKVMDRITGFMIHNNCENSDFSLFDR 116

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI 237
           ML +IE++FG  + ++EW+SLGGGIHFT +DYPV  FC RLK FSEK+ VQ+YLEPGEA 
Sbjct: 117 MLSDIEEKFGSLLHRVEWVSLGGGIHFTGEDYPVDAFCARLKSFSEKFGVQVYLEPGEAS 176

Query: 238 VTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSC 297
           +T TTTL  TVLD   N KNL IVDSS+EAH+ D L+Y+E A + PN G ++ MVCG+SC
Sbjct: 177 ITRTTTLEVTVLDTLFNGKNLAIVDSSIEAHMLDLLIYREKAKMAPNNGGHSYMVCGKSC 236

Query: 298 LAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF 357
           LAGDIFGEF F+KP+ IGDR+SFED AGY + +KNWFNG+ MP IAV+ +DGT+K +REF
Sbjct: 237 LAGDIFGEFTFDKPLAIGDRLSFEDAAGYTMVKKNWFNGVKMPAIAVRELDGTVKLVREF 296

Query: 358 SYNDYYNNLS 367
            Y D+  +LS
Sbjct: 297 DYADFEGSLS 306


>gi|86742407|ref|YP_482807.1| diaminopimelate decarboxylase [Frankia sp. CcI3]
 gi|86569269|gb|ABD13078.1| diaminopimelate decarboxylase [Frankia sp. CcI3]
          Length = 486

 Score =  176 bits (445), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 59/399 (14%), Positives = 126/399 (31%), Gaps = 39/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +++D+         A + R  A   +  A K F    +   +++        +  E
Sbjct: 62  GTPAFVLDEAD--FRARCAAWRRAFAECDVYYAGKAFLCRTIARWVDEGGLNLDVCTGGE 119

Query: 63  VMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F  +   ++   K       AV      I+ ++ +++ +    A +    ++
Sbjct: 120 LAVARSVGFPADRLLFHGNNKSVAELRAAVGYGVGRIVVDSFAEITRLAAVAAEAGVRQR 179

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC----------KDKIESEIKNVNGLMFHNNC 167
           + +R+ P V           +   + G             +    +    + GL  H   
Sbjct: 180 VLIRVTPGVEAHTHHYVSTGQEDQKFGFSLAGGSAAEAVERVLAAAGSLELVGLHAHIGS 239

Query: 168 ENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVK----DFCQRLK 219
           +      F      +             ++  + LGGG+              D  +RL 
Sbjct: 240 QIFDTAGFGLAAHRLVGLLARIRDTHDLELPELDLGGGLGIAYTGEDAPLEVTDVAERLT 299

Query: 220 EFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVP 270
               K          ++ +EPG AIV +TT     V  + E    +  V VD  +  ++ 
Sbjct: 300 AVVGKECAAAGLTVPRLAVEPGRAIVGSTTVTLYEVGTVKELPGLRTFVSVDGGMSDNIR 359

Query: 271 DYLLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAG 325
             L          +       +   + GR C +GD+          V+ GD ++      
Sbjct: 360 TALYDARYTARLVSRTGLATTHVVTIVGRHCESGDVVAHDVPLPDDVRPGDLLAIPASGA 419

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y+ +  + +N +  P +           +R  + +D   
Sbjct: 420 YHRSMASNYNHVARPPVIAVRDGAARIIVRRETEDDLLR 458


>gi|254442821|ref|ZP_05056297.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein
           [Verrucomicrobiae bacterium DG1235]
 gi|198257129|gb|EDY81437.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein
           [Verrucomicrobiae bacterium DG1235]
          Length = 419

 Score =  176 bits (445), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 61/388 (15%), Positives = 131/388 (33%), Gaps = 35/388 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+  + +L  +    L      G+    A+K      +            +SS +
Sbjct: 19  VGTPCYVYSEAELRASAKKVLAFPNAFGLTARYAMKASPNSNILRLFASMGMHFDASSGF 78

Query: 62  EVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           EV          +  + +      +  +++    ++   ++SQL +F   +     K+GL
Sbjct: 79  EVRRAIAAGIEPKRISLSTQELPEDFASLVETGISVNVCSLSQLKRFG--SALPGSKVGL 136

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESE----IKNVNGLMFHNNCENKSFLCFS 176
           R NP +        +   P S  G   +   E +       ++    H++  + S     
Sbjct: 137 RFNPGLGSGGTQRTNVGGPASSFGIWHEQLDEVKKVVEKYELDVFRIHSHIGSGSDPEVW 196

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKY------S 226
             + ++          +  ++LGGG         K   ++   Q++K   E++       
Sbjct: 197 IRVVSMNLALVEAFPSVTNLNLGGGYKIGRIEGEKTTDLQVIGQKMKVEFEEFAARTGRE 256

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLD---ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
           + + +EPG  +V N T++ + V D     ++  + + +D+ +  +    +   +      
Sbjct: 257 IHLEVEPGTYLVANCTSILSRVQDETSTGDSGYDFLKLDTGMTDNTRPSMYGAQHPMWVL 316

Query: 284 NT-----GPYTAMVCGRSCLAGDIFGEFHFEK---------PVKIGDRISFEDVAGYNIN 329
                  G    +V G  C +GDI      +            K+GD         Y  +
Sbjct: 317 PADESERGEKEYIVVGHCCESGDILTPASGDPEGLAPRRLTEAKVGDFFVIGGAGAYCSS 376

Query: 330 RKN-WFNGINMPTIAVKNVDGTIKAIRE 356
                +N        +    G +  IRE
Sbjct: 377 MAAKNYNSFPESAEVLVREGGRVAIIRE 404


>gi|27904869|ref|NP_777995.1| diaminopimelate decarboxylase [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
 gi|46395814|sp|Q89AC6|DCDA_BUCBP RecName: Full=Diaminopimelate decarboxylase; Short=DAP
           decarboxylase
 gi|27904267|gb|AAO27100.1| diaminopimelate decarboxylase [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
          Length = 418

 Score =  176 bits (445), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 58/397 (14%), Positives = 118/397 (29%), Gaps = 43/397 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   ++  +             +  A K  +   + +   +Y     + SL E
Sbjct: 24  GTPLWVYDSNIIVKKIKELSQFDV-----IRFAQKSCSNIHILNLFYKYNVKIDAVSLGE 78

Query: 63  VMLG-----HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
           +              +    +   +   ++ V+     I   ++  L +    +      
Sbjct: 79  IERALISKYRFTMDQDVVFTSDIIERETLNKVVQYKIPINIGSIDMLEQVGKIS--PGHN 136

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDK----IESEIKNVNGLMFHNNCENKSFL 173
           I LRINP   +      +     S+ G    +     I      + GL  H         
Sbjct: 137 IWLRINPKFGHGHSKKTNTGGENSKHGIWDINLAFPYITKYNFKLIGLHMHIGSGVDYCH 196

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK----------DFCQRLKEFSE 223
                   I++       +I  IS GGG+                    +  +++     
Sbjct: 197 LKRVCKAMIDQVL-QCKFKIHVISAGGGLTVPYHCNDEPVNVKNYFFLWNKARKIISNYL 255

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA--- 279
              +++ +EPG  +V  +  L + +  I +      I VDS     +   +         
Sbjct: 256 NRPIRLEIEPGRFLVAESGILVSEIRVIKKTNNRTFILVDSGFNDLIRPAMYGSYHHISV 315

Query: 280 -----TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYN 327
                          A+VCG  C +GD+F        +      V+IGD + F D   Y 
Sbjct: 316 IPRDGRCVNYDDTIEAVVCGPLCESGDVFTQNEYGDIKTRILPNVQIGDFLVFHDTGAYG 375

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            +  + +N   +    +   +      R  +  +   
Sbjct: 376 ASMSSNYNSRPLIPEILFKDNEFHIIRRRQTMKELLE 412


>gi|183220822|ref|YP_001838818.1| diaminopimelate decarboxylase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189910921|ref|YP_001962476.1| diaminopimelate decarboxylase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167775597|gb|ABZ93898.1| Diaminopimelate decarboxylase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167779244|gb|ABZ97542.1| Diaminopimelate decarboxylase (DAP decarboxylase) [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 422

 Score =  176 bits (445), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 65/396 (16%), Positives = 133/396 (33%), Gaps = 35/396 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++  ++++    D  L      G+++  A+K      +   + +      +SS +E
Sbjct: 23  GTPLFVYSEKEIEQKCDDTLAFPNAFGLQVRYAMKANPNSNILQIMKKKGILIDASSEHE 82

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           V+      F  E+              ++         ++ QL  F        K + +R
Sbjct: 83  VVRALHFGFSPESIMLTSQEFPKAFVELIGKGVKFNACSLRQLELFGQ--HFPGKSVSIR 140

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESE----IKNVNGLMFHNNCENKSFLCFSA 177
            NP +        D     S  G   +   E +      N+     H +  + S      
Sbjct: 141 FNPGLGSGHTKKTDVGGVTSSFGIWHEKLEEVKAIVNKYNLVVEKVHTHIGSGSDPEVWK 200

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL--------KEFSEKYSVQI 229
            +     E+      +  +SLGGG      +       Q +        +EF++K+  ++
Sbjct: 201 AVAKYTLEYAESFPSVTVVSLGGGYKVGRMEDEKSTNLQTIGAPVKIQFEEFAKKHGRKL 260

Query: 230 Y--LEPGEAIVTNTTTLNTTV---LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
              +EPG  ++     L TTV   +D  ++    + +D+ ++++    L       I   
Sbjct: 261 ILEIEPGTYLIALCGALLTTVDDKVDTGKHGFQFLKLDTGMDSNTRPSLYGARHPLITVK 320

Query: 285 T------GPYTAMVCGRSCLAGDIFGE-------FHFEKPVKIGDRISFEDVAGYNINRK 331
                       +V G  C +GD+F +              +IGD +  E +  Y  +  
Sbjct: 321 KDGGIPSSHKEYVVVGHCCESGDVFTQKEGGEPITRLMGEAEIGDYVVMEAIGAYCSSMS 380

Query: 332 N-WFNGINMPTIAVKNVDGTIKAIR-EFSYNDYYNN 365
              +N        +   +G  K IR +    + + N
Sbjct: 381 TKNYNSFPETAEVLLRKNGETKLIRKKEPVMEIFRN 416


>gi|332671323|ref|YP_004454331.1| diaminopimelate decarboxylase [Cellulomonas fimi ATCC 484]
 gi|332340361|gb|AEE46944.1| diaminopimelate decarboxylase [Cellulomonas fimi ATCC 484]
          Length = 481

 Score =  175 bits (444), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 58/423 (13%), Positives = 117/423 (27%), Gaps = 61/423 (14%)

Query: 3   KTPYYLIDKQKLLNNLDT----ALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTT 56
            TP Y++D+Q L     T             AGV +  A K F +  +   +++      
Sbjct: 54  GTPAYVLDEQDLRTRARTYRRAFTEAFAEIGAGVDVYYAGKAFLSVAVARWVHEEGLRVD 113

Query: 57  SSSLYEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK 113
           ++S  E+ +       G     +   K     A    +    II +++ ++ +  D    
Sbjct: 114 TASGGELAVALRAGVPGAEIGLHGNNKSDGEIAAALDAGVGRIIVDSLVEIERVADAVAA 173

Query: 114 ---LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------------------- 148
                  + +R+   V               + G                          
Sbjct: 174 RGGAPAPVMVRVTTGVHAGGHEYISTAHEDQKFGLSLAPSRGTADTVAAADDDSPAMTAL 233

Query: 149 -DKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIH 203
              +      + G+  H   +      F+   + +              +E + LGGG  
Sbjct: 234 LAVVARPELRLLGIHSHIGSQILDPSGFAVAARAVLALRARLAARTGVLVEEVDLGGGYG 293

Query: 204 FTDKDYPVKDFCQRLKEFSEKYS-----------VQIYLEPGEAIVTNTTTLNTTVLDIS 252
                  V     R+ +                  +  +EPG AIV        +V  + 
Sbjct: 294 IAYLPGEVALDADRIAKEVAASVERSAAEVGTDLPRFSIEPGRAIVGPAGLTLYSVGTVK 353

Query: 253 ENIKNLVIVDSS------VEAHVPDYLLYQESA----TIYPNTGPYTAMVCGRSCLAGDI 302
               +             +  ++   L   +             P  A V G+ C +GDI
Sbjct: 354 PVRLDEGRTRLYVSVDGGMSDNIRPALYGAQYHAEVVGRLSTAEPVLARVVGKHCESGDI 413

Query: 303 FGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361
                     V+ GD ++      Y  +  + +N +  P +       +   +R  + +D
Sbjct: 414 VVHEVHLPGDVRAGDLLAVAATGAYGRSMASNYNLLTRPPVVAVREGASRVLVRRETVDD 473

Query: 362 YYN 364
              
Sbjct: 474 LLA 476


>gi|313238222|emb|CBY13314.1| unnamed protein product [Oikopleura dioica]
          Length = 415

 Score =  175 bits (444), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 47/385 (12%), Positives = 109/385 (28%), Gaps = 29/385 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLY 61
           P ++  +  L +N+ + L       +  +L  ++K      +   L      G T+ S  
Sbjct: 28  PVFVYSENSLRSNVKSYLSGLDALKSMTQLNFSMKSNFNPAVIKVLKSAGVTGLTTVSGG 87

Query: 62  EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHKK 117
           E+ L    E    +         D E+   +     I  ++     +     +A     +
Sbjct: 88  ELDLAAKLEFNSDKVIFNGNGKCDGEVRTAIERGHIINVDSWFDYVRISSTSRALNQKCQ 147

Query: 118 IGLRINPSVSYSKFILADP-NRPFSRLGE-------KCKDKIESEIKNVNGLMFHNNCEN 169
           + +RINP++           +    + G          +   E E  ++ G+  H     
Sbjct: 148 VLIRINPNIDPKVHQYNTTASGKACKFGVIQEEISSLARKIFEDENLSLLGIHCHLGSTI 207

Query: 170 KSFLCFSAMLKNIEKEFGHFITQI----EWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
                       ++         +    + +++GGG+    +         +        
Sbjct: 208 NDLEPIRQCSTTLKIIMESIAHFLEPGRKVVNVGGGLAINYEKQAHGYPTPQEYTECFTN 267

Query: 226 S---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
                 I  EPG ++V N+       L +  +   +  +  +    +   L         
Sbjct: 268 FGRDYLIIFEPGRSLVGNSAVCVGRSLGVKNDNILVTNMSMTEC--IRPALYQAFHLVTL 325

Query: 283 PNTGPYT----AMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGI 337
                        V G  C + D   +       ++    +   DV  Y     + +N  
Sbjct: 326 TKKTSKADSKVFKVVGPVCESADFLNKAAELPSTIENNQLVVLWDVGAYCHVLSSNYNMR 385

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDY 362
                 +       +  R+ ++ D 
Sbjct: 386 PRRAEYLVTGSQFRQIRRQDTFEDM 410


>gi|323356878|ref|YP_004223274.1| diaminopimelate decarboxylase [Microbacterium testaceum StLB037]
 gi|323273249|dbj|BAJ73394.1| diaminopimelate decarboxylase [Microbacterium testaceum StLB037]
          Length = 476

 Score =  175 bits (444), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 53/405 (13%), Positives = 115/405 (28%), Gaps = 42/405 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYI------RKNAGVKLLLALKCFAAWGMFDTLNQYMDGTT 56
            TP Y++D+ ++  +   A         R     ++  A K F +  +   +        
Sbjct: 54  GTPLYVLDEDEVRTHARRARAAFDSAAERHGIRARVYYAGKAFLSTEVVRWVVDEGLAVD 113

Query: 57  SSSLYEVMLGHE-KFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQK 113
             +  E+ +            ++   K       AV     +++ ++  ++ +    A +
Sbjct: 114 VCTRGELEVALAAGADPARLGFHGNNKSVGELERAVEVGIGSVVIDSPIEIERLAAIADR 173

Query: 114 --LHKKIGLRINPSVSYSKFILADPNRPFSRLG-------EKCKDKIESEIKNVNGLMFH 164
             + + + +R+   V               + G       E      E       GL  H
Sbjct: 174 RGVVQSVLVRVRTGVHAETHAFLATAHEDQKFGFSLEGAAEAVARIRELPSLRFVGLHAH 233

Query: 165 NNCENKSFLCFSAMLKNIEKEFGH--FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
              +      F      +           +I  +++GGG   +          + + +  
Sbjct: 234 IGSQIFDSSGFRESAARLVDLHADLLAGGEIPVLNVGGGFGISYTSVDDPKPIEEIADGI 293

Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDIS------ENIKNLVIVDSSV 265
                            +  EPG  IV         V  +          +  V VD  +
Sbjct: 294 LDAIADECAVRGIPMPDVATEPGRVIVGQAGVTLYEVGTVKTVTATENLERTYVSVDGGM 353

Query: 266 EAHVPDYLLYQ----ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISF 320
             +    L          +   +  P  + V GR C +GDI  +  +    V  GD ++ 
Sbjct: 354 SDNARPALYGADFSARVVSRTSSATPALSRVVGRHCESGDIVVDAEYLPADVTPGDLLAV 413

Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
                Y  +  + +N    P +           +R  + +D  + 
Sbjct: 414 PATGAYCFSLASNYNYTPRPPVVAVRDGQARVIVRGETVDDLLSR 458


>gi|167524549|ref|XP_001746610.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163774880|gb|EDQ88506.1| predicted protein [Monosiga brevicollis MX1]
          Length = 795

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 52/358 (14%), Positives = 104/358 (29%), Gaps = 18/358 (5%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y+  +          +         L  A+K  +   +   ++    G    S  E+ 
Sbjct: 439 PVYVYSRDMAFRQTQRLISNLNAVD-SLFFAIKANSHPDVLRAVHAAGAGFECVSQMEID 497

Query: 65  LGHEKFGG--ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
           L    F      H           +   +    +     +     +        K+ LRI
Sbjct: 498 LILSLFPDIDVRHLLFTPNFAARSEYEHALKLGVNVTVDNSFVLQEWHELFRGAKVLLRI 557

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIE------SEIKNVNGLMFHNNCENKSFLCFS 176
           +                 S+ G    +  E      +    V GL  H+    ++   ++
Sbjct: 558 DSGQGQGHHAHVKTGGSASKFGLDVHELAEVAQLCAAHGIEVFGLHCHSGSGVENTTLWA 617

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS-----EKYSVQIYL 231
             L+ + K           I++GGG+         +   + + +       E    Q+++
Sbjct: 618 NHLQYLAKLAREHFPAARVINVGGGLSIPYTFGGAEVNLKAVDDALAAAKAEFPQFQVWM 677

Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-PDYLLYQESA--TIYPNTGPY 288
           EPG  I      +   V  I        +  ++    +    L         I  +  P 
Sbjct: 678 EPGRFIAAQCGIVLAKVTQIKHKSGVKFVGVTAGMHTMIRPALYQAYHEVVNISRDGPPA 737

Query: 289 TAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
            A+VCG  C +GD+F          + GD +  +    Y     + +N   +P   + 
Sbjct: 738 NAVVCGPICESGDVFARERPLPEDTREGDVLLIDCCGAYGFCMASTYNLRPLPEELIV 795


>gi|255074843|ref|XP_002501096.1| predicted protein [Micromonas sp. RCC299]
 gi|226516359|gb|ACO62354.1| predicted protein [Micromonas sp. RCC299]
          Length = 433

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 66/402 (16%), Positives = 125/402 (31%), Gaps = 43/402 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D  +L      A       G+ +  A+K      +     +      +SS YE
Sbjct: 27  GTPTYVYDLARLQEQATKAKAFPNAFGLTVRYAMKASPNAAILKVFRKAGLHIDASSGYE 86

Query: 63  V-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           V       F  +  + +          ++     +   ++SQL  +         K+GLR
Sbjct: 87  VHRAVKAGFQYDQISLSTQEFPDFFPELVDKGLKVNACSLSQLEAYGI--MFPGAKVGLR 144

Query: 122 INPSVSYSKFILADPNRPFSRLGEK------CKDKIESEIKNVNGLMFHNNCENKSFLCF 175
            NP +        +   P S  G         K+ +E     V+ +  H    +   +  
Sbjct: 145 FNPGLGSGGTGKTNVGGPSSSFGIWHELLPEAKEIVERHGLIVDRIHTHIGSGSDPAVWQ 204

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY----- 230
                 +  +       +E ++LGGG       Y      Q +    ++   +       
Sbjct: 205 KTSG--MSLDLCRQFPTVETLNLGGGYKVGRMSYEKSTDLQVVGSPVKELFQKFAEETGR 262

Query: 231 -----LEPGEAIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESAT 280
                +EPG  ++ N+  +  TV D  +   +         D+ +   +   L   +   
Sbjct: 263 ELKLEIEPGTFLLANSCAVVCTVQDKVKTSDDADGHVFLKLDAGMTEVLRPSLYAAQHPL 322

Query: 281 IYPNTGPY------TAMVCGRSCLAGDIFGE---------FHFEKPVKIGDRISFEDVAG 325
           +  +          + +V G  C +GD+                  V IGD +  E    
Sbjct: 323 VTVSAAGELPKEHASYVVVGHCCESGDLMTPTPDDAEGIAERTMGAVDIGDLLVVEGAGA 382

Query: 326 YNINRKN-WFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNN 365
           Y     +  +N        +K  DGT+  IR+  +      N
Sbjct: 383 YCAGMSSKNYNSFPEAPEVMKGADGTMHLIRQKQTLEQILVN 424


>gi|186682256|ref|YP_001865452.1| Orn/DAP/Arg decarboxylase 2 [Nostoc punctiforme PCC 73102]
 gi|186464708|gb|ACC80509.1| Orn/DAP/Arg decarboxylase 2 [Nostoc punctiforme PCC 73102]
          Length = 414

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 51/378 (13%), Positives = 119/378 (31%), Gaps = 17/378 (4%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+ +   L   ++           +   A        +      +  G  +++  +
Sbjct: 36  GSPLYVYNGDHLRETIECITKAISYRRTQFRFASVTNGNIALLKIFRSFGWGLHANTPGD 95

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + LG    F      Y+ +   +   I  +     T+  ++++QL     K    H++  
Sbjct: 96  IYLGLQAGFDPSEIVYSGSNLNRAEMIQVLNWGVTTLNLDSLAQLQ-LCCKVLPKHREKS 154

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +R+   ++  +                           ++GL F+      +   F+ ++
Sbjct: 155 IRLGLRLNLPEITGDSRIGVRPEEFGDAIALTREVGLKLSGLHFYRGTGTNATEAFTQVI 214

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSEK--YSVQIYLEP 233
             +       +   E++  GGG  +        +  + F   L E        + + +EP
Sbjct: 215 DAVIAT-AQLLPDWEYLDFGGGFGYPYHHNKTAFDWEVFGAELSERITHLGRKIDLVIEP 273

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPNTGP----- 287
           G + +    TL   V+ +    +  +I   +  A++    +                   
Sbjct: 274 GRSAIAGCATLLAQVVSVKWQGEKQIIGVDTTVANLSVPSVHGGYREIFTWKQADNLRSL 333

Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
           +T  +CG +  + D  G+      ++IGD ++  DV  Y     + F     P   +   
Sbjct: 334 FTTDICGNTTYSRDYLGKNCQLPALEIGDIVAILDVGAYGYAMSSHFLHRPKPAEVLLEN 393

Query: 348 DGTIKAIREFSYNDYYNN 365
                  R   Y+    N
Sbjct: 394 GTHRLIRRREDYSVLLTN 411


>gi|116329346|ref|YP_799066.1| diaminopimelate decarboxylase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116330051|ref|YP_799769.1| diaminopimelate decarboxylase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116122090|gb|ABJ80133.1| Diaminopimelate decarboxylase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116123740|gb|ABJ75011.1| Diaminopimelate decarboxylase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 422

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 60/396 (15%), Positives = 139/396 (35%), Gaps = 35/396 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++  ++ +  + D AL      G+ +  A+K  +   + + + +      +SS YE
Sbjct: 23  GTPIFVYSREGIEKSCDAALAFPNGYGLTVRYAMKANSNRTILEIIKRKGIQIDASSEYE 82

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           V+   H  F  E            +   +         ++ QL  F +      K++ +R
Sbjct: 83  VLRAIHYGFKPEEIMLTSQELAKNLKEFVEKGVVFNACSLRQLEAFGNL--FPGKEVSVR 140

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDK----IESEIKNVNGLMFHNNCENKSFLCFSA 177
            NP +   +    D     S  G   ++       +    +     H +  + S      
Sbjct: 141 FNPGLGSGQTKKTDVGGKTSSFGVWHEELNKVKEIASKYKLKIFKIHTHIGSGSDPEAWK 200

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF--------CQRLKEFSEKYSVQI 229
            +  +  +     ++ + ++LGGG      +               +  +EF++K+   +
Sbjct: 201 AIAQVSLDIAAQFSECKILNLGGGFKVGRMEDEKTTNFQKIGKPVVELFQEFAKKHGTSL 260

Query: 230 Y--LEPGEAIVTNTTTLNTTVLDIS---ENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
           +  +EPG  ++ N  ++ +TV D+    +     V +D+ ++ +    L       +   
Sbjct: 261 HLEIEPGSFLMVNNGSIISTVDDVVSTGDGGYTFVKIDAGMDVNTRPSLYAARHPLVVVP 320

Query: 285 T------GPYTAMVCGRSCLAGDIFGE-------FHFEKPVKIGDRISFEDVAGYNINRK 331
                     + +  G  C +GD+F +              ++GD +  E    Y  +  
Sbjct: 321 KVETHSGKTASYVYVGHCCESGDLFTQAEGGGPVTRITGEAQLGDYVVMEGAGAYCSSMS 380

Query: 332 N-WFNGINMPTIAVKNVDGTIKAIR-EFSYNDYYNN 365
              +N        + ++DG+ + IR   +    + N
Sbjct: 381 TKNYNSFPETAEVLVDLDGSFQLIRKRQNLEQIFQN 416


>gi|83859343|ref|ZP_00952864.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein
           [Oceanicaulis alexandrii HTCC2633]
 gi|83852790|gb|EAP90643.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein
           [Oceanicaulis alexandrii HTCC2633]
          Length = 864

 Score =  174 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 55/362 (15%), Positives = 102/362 (28%), Gaps = 31/362 (8%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66
           Y+ D + +         I   +  +   A+K      +  T+ +   G    S  E+M  
Sbjct: 511 YVYDLETIKARASAVANI--KSVNRAFYAMKANPHPDVLKTIFEAGLGFECVSPGELMRL 568

Query: 67  HEKFG---GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG---- 119
            + F     +   +   +      A       I   T   ++      +      G    
Sbjct: 569 KDTFPGLDPKKVLFTPNF-----AARHEYAAAIELGTNLTIDGLHPLTEWPELFKGVEVI 623

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSFL 173
           LRINP              P ++ G        +          V GL  H         
Sbjct: 624 LRINPDRPRGHHQHVQTAGPKAKFGIPLDQLDAARDAAAKAGATVIGLHAHAGSGVIEAG 683

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-----SVQ 228
            +  +   +        + I  +++GGG+   +           +     K        +
Sbjct: 684 HWREIGAILA-RAAEGFSDIRILNVGGGLGVPESAEAPALDLALVDAELAKLKQALPDYE 742

Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATI----YP 283
           I++EPG   V  +  L + V  I        I   + + + +   L       +    Y 
Sbjct: 743 IWMEPGRYPVAESGVLLSAVTQIKHAFGTRFIGLGTGMNSLIRPALYGARHEIVNLSRYD 802

Query: 284 NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343
             G   A + G  C + D+ G        K GD I+  +   Y     + +N        
Sbjct: 803 EEGTGMASIVGPICESADLLGADRLMPETKEGDVIAIAEAGAYGAVMSSRYNLREPADEV 862

Query: 344 VK 345
           V 
Sbjct: 863 VI 864


>gi|15606123|ref|NP_213500.1| ornithine decarboxylase [Aquifex aeolicus VF5]
 gi|2983314|gb|AAC06904.1| ornithine decarboxylase [Aquifex aeolicus VF5]
          Length = 390

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 60/357 (16%), Positives = 125/357 (35%), Gaps = 22/357 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP  L+D Q +        Y        +  A+K      +   L +   G   +S  E
Sbjct: 38  KTPVLLMDIQGVKKKYLEVKYHFPEFN--VYYAVKANDDESVIRALVEVGAGFEVASSQE 95

Query: 63  VMLGHEKFGG--ETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +       G   +  + N       I+ A      T   ++++++ K KD A +    + 
Sbjct: 96  LEKVLRLGGKIEKVISSNPVKPPEFIEFAYQKGVRTFAVDSITEVKKIKDIAPRSKVYVR 155

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177
           + +    S          +    + E  +    +    +   G+ FH   +  +   +  
Sbjct: 156 IAVPNEGS----DWPLSRKFGVSVEEAVEILEYANDLGLVPYGITFHVGSQCNNLRNWFI 211

Query: 178 MLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYP--VKDFCQRLKEFSEKY----SVQ 228
            +K   + +        +++ +++GGGI          V+D    +K    KY      +
Sbjct: 212 AVKLSAQLWEKARAKGLKLQMLNMGGGIPVRYNYEALSVEDIAYYVKGLMRKYFPVQPYE 271

Query: 229 IYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287
           + +EPG  IV +   + T V+  ++   +N + +D+ V   + + L            G 
Sbjct: 272 LQIEPGRGIVGDQGIMVTKVIGKAKRGSENWLYIDTGVFNGLAEALGGIRYPFFLEREGE 331

Query: 288 -YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343
                + G SC + D+  +  +    ++GD +       Y     + FNG   P + 
Sbjct: 332 LKEWTIGGVSCDSMDVVAKNVYLPEPEVGDYLYILSAGAYTTVYASNFNGFPKPEVV 388


>gi|320165468|gb|EFW42367.1| bifunctional aspartate kinase/diaminopimelate decarboxylase
            [Capsaspora owczarzaki ATCC 30864]
          Length = 1083

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 60/376 (15%), Positives = 115/376 (30%), Gaps = 38/376 (10%)

Query: 5    PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
            P Y+  +  +  +      +   +  +L  A+K  +   + D +     G    SL EV 
Sbjct: 710  PLYVYAESAIRRSASELSQLTALS--RLFYAMKANSNRQVLDLVASLGLGLECVSLGEVE 767

Query: 65   LGHEKFGG-----------ETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA 111
            L  E                   +   +  +     A+  +   +  +++  L   +  +
Sbjct: 768  LAREVLSSLGPAAAANGTAAPIFFTPNFVQRSEYEGALAFSNVLVNVDSMYPLR--QWTS 825

Query: 112  QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE------SEIKNVNGLMFHN 165
                + I LRI+P V              S+ G    D  E          NV GL  H 
Sbjct: 826  TFAGQSIMLRIDPGVGAGHHDHVKTGGAASKFGISSADLAECAALCAEHRINVVGLHAHA 885

Query: 166  NCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIH-----FTDKDYPVKDFCQRLKE 220
                     +    + +         +   ++LGGG+           +        L  
Sbjct: 886  GSGILDPHQWVLHAELLASHAMRHFPRATILNLGGGVGVNPQCPQSDAFNFAQLNSLLTA 945

Query: 221  FSEKY-SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-HVPDYLL--YQ 276
            FSEK+   ++++EPG  +V  +  L   V  +        +  ++     +   L   Y 
Sbjct: 946  FSEKHPQFKLWMEPGRFVVAPSGVLLARVSQVKSKSGVTFVGLNAGMHNLIRPALYSAYH 1005

Query: 277  ESATIYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINR 330
                I            + +V G  C +GD+ G            D I  E V  Y  + 
Sbjct: 1006 GIHNISRFGMDGDRDTMSCVVVGPICESGDVLGRDRVLPASTSEDDVILIECVGAYGRSM 1065

Query: 331  KNWFNGINMPTIAVKN 346
             + +N   + +  +  
Sbjct: 1066 ASTYNLRPVASEILAR 1081


>gi|167462581|ref|ZP_02327670.1| diaminopimelate decarboxylase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 390

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 61/361 (16%), Positives = 110/361 (30%), Gaps = 37/361 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++D+  +       +   +++G   ++  A K F    M     +        S 
Sbjct: 30  GTPLYVVDETLVRQRCQEFVSAFRDSGLKFQVAYASKAFCVKAMCRVAVEEGMSLDVVSD 89

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+M   E  F  E   ++   K  +   +   +     + +   ++      A  Q L 
Sbjct: 90  GELMTALESGFPPERIHFHGNNKTPQEIEMALRAGIGCFVVDNFVEMQLLHSMAAEQGLR 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNN 166
             + LRI P V           +  S+ G   +         +    E  ++ G+  H  
Sbjct: 150 VNVLLRITPGVEAHTHEYISTGQTDSKFGFDLENGSAFQAVQEASRLESFHLLGIHSHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFC------- 215
            +      F   ++ +               + I+LGGG                     
Sbjct: 210 SQIFEVEGFQIAVEKVAAFAVQVRDEMGISFQVINLGGGFGIRYTAEDTPLPVSQYVQAI 269

Query: 216 -QRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHV 269
              +K     Y   I   ++EPG +IV +  T   TV  I +       V     +  + 
Sbjct: 270 TNSIKTCFASYKYPIPEIWVEPGRSIVGDAGTTLYTVGTIKDIPGVRKYVSVDGGMTDNP 329

Query: 270 PDYLLYQESATIYPNTGPYTA----MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              L       I  N     A     V G+ C +GD+         V+ GD ++      
Sbjct: 330 RPALYQSVYEAILANRAKEEAAEVISVAGKCCESGDMLIWDVKLPKVQTGDILAVFCTGA 389

Query: 326 Y 326
           Y
Sbjct: 390 Y 390


>gi|114331378|ref|YP_747600.1| ornithine decarboxylase [Nitrosomonas eutropha C91]
 gi|114308392|gb|ABI59635.1| ornithine decarboxylase [Nitrosomonas eutropha C91]
          Length = 390

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 50/354 (14%), Positives = 107/354 (30%), Gaps = 17/354 (4%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+ ++D   + N             V    A K      +  TL +   G   +S+ E+ 
Sbjct: 41  PFLMVDTAIIRNKARRFKAAMPR--VHPHYAAKANPDPRVLKTLIEEGVGFEIASIAELD 98

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           L            Y+   K             +  + ++V +L K           + + 
Sbjct: 99  LLMGFGVPAAEIFYSNPMKSRAYLQYAAAKGVEWYVLDSVEELRKIVSIKADAKLYLRID 158

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
                S                  +  D+      ++ G+ FH   + ++   +   ++ 
Sbjct: 159 TPNIGSDWPLAGKFGTHLGD--VREIIDEAVKLNADLAGVTFHVGSQCRNPQNWRVGIER 216

Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYSVQIYL--EPG 234
            +  F            ++LGGG           ++   + + E        I +  EPG
Sbjct: 217 AKTVFASMREAGLNPRLLNLGGGYPVRYVKPIPSIEIIAEVINEAIADLPQNIRIMAEPG 276

Query: 235 EAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-YTAMV 292
             +V+++      V+  +    K  +  D+ +   + +         +    G      V
Sbjct: 277 RYLVSDSACFVCRVVGTATRNGKRWMYWDAGIFGGIIEVSEGLRYEILTQRNGSLVPWSV 336

Query: 293 CGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
            G +C + D+          V+  D I   +   Y  +  + FNG  +P + V 
Sbjct: 337 AGPTCDSVDVLMHDEMLPEDVREDDFIFIPNAGAYTTSYASNFNGFPLPDVIVV 390


>gi|221485097|gb|EEE23387.1| pyridoxal-dependent decarboxylase, putative [Toxoplasma gondii GT1]
          Length = 564

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 66/457 (14%), Positives = 118/457 (25%), Gaps = 95/457 (20%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR------------------------------------- 25
            TP+YL D+ ++  N    L                                        
Sbjct: 13  PTPFYLYDETRIRENCRRLLAAFSWASEPFSTSSQSALENAPRSPRESLENRLGVRSSYS 72

Query: 26  KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKD- 83
             AG     A+K      + + L +   G   SSL E++L     F GE   +       
Sbjct: 73  AAAGFTNYFAVKATPTPAILEILREEGLGADCSSLAELLLAEAAGFRGERIFFTSNETPL 132

Query: 84  CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY------SKFILADPN 137
            E          I  +  S L+   +K       I        +           +   +
Sbjct: 133 EEFLKARDLGAIINLDDASHLDFLHEKFGGALPSILCFRFNPSAESRQSTSQSNPVIMGH 192

Query: 138 RPFSRLGEKCKDKIESEIK----NVNGLMFHNNCENKS------FLCFSAMLKNIEKEFG 187
              S+ G           +     V     H    +              +L    +   
Sbjct: 193 PKESKFGMTKTQLFHCLSRARSWGVRRFALHTMILSNCLSVDEVVETARLILTVAAEINE 252

Query: 188 HFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEKY-------SVQIYLEPGEA 236
                IE I+LGGG+            + +   R++ + +           ++  E G  
Sbjct: 253 RLGITIEMINLGGGLGVPYHPEEKDLNLHEVSARIRTWYKCTLALKGLAGTRLVTENGRF 312

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT------- 289
           I  +   L T V+   +  K  + VD+ +   +   +              +        
Sbjct: 313 ITADAGVLVTRVIHHKKTYKRFIGVDACMAHLMRPGMYGAYHHISVVPDRDHDDPRLPSR 372

Query: 290 ---------------------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
                                  V G  C   D F        V IGD +   DV  +  
Sbjct: 373 RNLFLSPEDDEEADDVSDNEIYDVVGGLCENNDKFAIDRPLPRVDIGDILLIHDVGAHGH 432

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           +    +NG       ++ ++G +  IR   +  D + 
Sbjct: 433 SMCFNYNGRLRCAEYLRRLNGEVVMIRRAETLKDLFA 469


>gi|241699676|ref|XP_002413144.1| ornithine decarboxylase, putative [Ixodes scapularis]
 gi|215506958|gb|EEC16452.1| ornithine decarboxylase, putative [Ixodes scapularis]
          Length = 443

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 64/383 (16%), Positives = 134/383 (34%), Gaps = 24/383 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P++++D   ++  +       K   V+   A+KC +   + + +     G   +S  E+ 
Sbjct: 31  PFFVVDVADIVYKIKLWK--LKIPRVEPFYAVKCNSDAAVLELMAGLGLGFDCASKAEID 88

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +            Y    K        +     +    ++   +K K      ++ +RI 
Sbjct: 89  VVRSLGVSPSRIIYANPCKTKSFIKHAAAQGVDLMTFDNEQELYKVKELFPLARLVIRIR 148

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S S   L           +      +S   +V G+ FH    ++  + F+  +++  
Sbjct: 149 VDDSGSVCQLGLKFGCEVSDAQHLLTIAKSLGLSVVGVSFHVGSNSREPMSFARAIESAR 208

Query: 184 KEFGH---FITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIYLEPG 234
             F         +E + +GGG                         F E+  V++  EPG
Sbjct: 209 LVFDQGLAMGFPMELLDIGGGYPGDRGFQKLFDKITQTINGSLALHFPEETGVRVISEPG 268

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT----- 289
              V +  TL TTV+   E +     +  ++     D +    + T++ +  P       
Sbjct: 269 RFFVASAFTLYTTVIAKREVLLPGSALPRAMYYL-NDGVYGSFNCTVFDHAEPVPFALRG 327

Query: 290 ------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343
                   + G +C + D   E      + +GD + FE++  Y +   + FNG  +P + 
Sbjct: 328 GGPLRPCSLWGPTCDSMDQILEEALLPDLGVGDWVVFENMGAYTLCASSNFNGFQVPEVK 387

Query: 344 VKNVDGTIKAIREFSYNDYYNNL 366
                 +I  +REF + ++ + L
Sbjct: 388 YALTYASIAYLREFPFWEHLSRL 410


>gi|295394644|ref|ZP_06804863.1| diaminopimelate decarboxylase [Brevibacterium mcbrellneri ATCC
           49030]
 gi|294972537|gb|EFG48393.1| diaminopimelate decarboxylase [Brevibacterium mcbrellneri ATCC
           49030]
          Length = 479

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 59/408 (14%), Positives = 114/408 (27%), Gaps = 46/408 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV------KLLLALKCFAAWGMFDTLNQYMDGTT 56
            +P ++ D                          +   A K F    +     +   G  
Sbjct: 58  GSPVFVFDVDDFQTRARDFAESFDREFAANGMTARGYYAGKAFLCTAVARWATEAGLGVD 117

Query: 57  SSSLYEVMLGHEKF--GGETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKA-- 111
           + +L E++         G    +     D E++ AV      I+ +++ ++ + +  A  
Sbjct: 118 TCTLGEMLTARAAGVDPGRVGLHGNNKSDAELEMAVSWGIGRIVVDSLDEIPRVERIAER 177

Query: 112 QKLHKKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLM 162
             +   + +R+   V               + G         E CK  ++S   ++ GL 
Sbjct: 178 CGVTAPVMVRVTVGVEAHTHDFIATAHEDQKFGLSLASGQALEACKKVLKSPHLDLVGLH 237

Query: 163 FHNNCENKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL 218
            H   +      F      +++        F   +  + LGGG                +
Sbjct: 238 SHIGSQIFDAEGFILAATRVIRLRATLQRDFGAPVAEVDLGGGFGIRYTSQDTPSSFADM 297

Query: 219 KEFSEKYSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA 267
                +  V+              EPG AIV         V  I        +       
Sbjct: 298 ARKLARAVVRACEDEDTDLPNVSFEPGRAIVGPAAFTLYEVGTIKPVHTENGVRTYVSID 357

Query: 268 H---------VPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDR 317
                     + D       A    +  P    V G+ C +GDI     +    V  GD 
Sbjct: 358 GGMSDNARTALYDADYSCTLANRRSDAEPIVVRVVGKHCESGDIVVRDEYLPSDVSAGDL 417

Query: 318 ISFEDVAGYNINRKNWFNGINMPTIAVKNVDGT-IKAIREFSYNDYYN 364
           I+  D   Y     + +N +  P +            ++  +Y+D + 
Sbjct: 418 IAVPDTGAYCKPLASNYNLVPRPGVLAVEEGRDPYWIVQPETYSDLFA 465


>gi|237842559|ref|XP_002370577.1| diaminopimelate decarboxylase, putative [Toxoplasma gondii ME49]
 gi|211968241|gb|EEB03437.1| diaminopimelate decarboxylase, putative [Toxoplasma gondii ME49]
 gi|221502696|gb|EEE28416.1| pyridoxal-dependent decarboxylase, putative [Toxoplasma gondii VEG]
          Length = 564

 Score =  174 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 66/457 (14%), Positives = 118/457 (25%), Gaps = 95/457 (20%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR------------------------------------- 25
            TP+YL D+ ++  N    L                                        
Sbjct: 13  PTPFYLYDETRIRENCRRLLAAFSWASEPFSTSSQSALENAPRSPRESLENRLGVCSSYS 72

Query: 26  KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKD- 83
             AG     A+K      + + L +   G   SSL E++L     F GE   +       
Sbjct: 73  AAAGFTNYFAVKATPTPAILEILREEGLGADCSSLAELLLAEAAGFRGERIFFTSNETPL 132

Query: 84  CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY------SKFILADPN 137
            E          I  +  S L+   +K       I        +           +   +
Sbjct: 133 EEFLKARDLGAIINLDDASHLDFLHEKFGGALPSILCFRFNPSAESRQSTSQSNPVIMGH 192

Query: 138 RPFSRLGEKCKDKIESEIK----NVNGLMFHNNCENKS------FLCFSAMLKNIEKEFG 187
              S+ G           +     V     H    +              +L    +   
Sbjct: 193 PKESKFGMTKTQLFHCLSRARSWGVRRFALHTMILSNCLSVDEVVETARLILTVAAEINE 252

Query: 188 HFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEKY-------SVQIYLEPGEA 236
                IE I+LGGG+            + +   R++ + +           ++  E G  
Sbjct: 253 RLGITIEMINLGGGLGVPYHPEEKDLNLHEVSARIRTWYKCTLALKGLAGTRLVTENGRF 312

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT------- 289
           I  +   L T V+   +  K  + VD+ +   +   +              +        
Sbjct: 313 ITADAGVLVTRVIHHKKTYKRFIGVDACMAHLMRPGMYGAYHHISVVPDRDHDDPRLPSR 372

Query: 290 ---------------------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
                                  V G  C   D F        V IGD +   DV  +  
Sbjct: 373 RNLFLSPEDGEEADDVSDDEIYDVVGGLCENNDKFAIDRPLPRVDIGDILLIHDVGAHGH 432

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           +    +NG       ++ ++G +  IR   +  D + 
Sbjct: 433 SMCFNYNGRLRCAEYLRRLNGEVVMIRRAETLKDLFA 469


>gi|303290454|ref|XP_003064514.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226454112|gb|EEH51419.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 437

 Score =  173 bits (439), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 66/402 (16%), Positives = 119/402 (29%), Gaps = 41/402 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D   L      AL      G+ +  A+K      +            +SS +E
Sbjct: 29  GTPTYVYDAATLKAQAAKALDFPNAFGLTVRYAMKASPNAAILKIFRNAGLKIDASSGHE 88

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           V       F     + +        + ++     +   ++SQL  F   A     +IGLR
Sbjct: 89  VRRAVRAGFDHADCSLSTQEFPEFFEELVKKGLKVNACSLSQLEAFG--AAFPGAEIGLR 146

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIES----EIKNVNGLMFHNNCENKSFLCFSA 177
            NP +        +   P S  G   +   E+    E   +  +  H +  + S      
Sbjct: 147 FNPGLGSGGTGKTNVGGPSSSFGIWHELLPEARAICEKHGLKVVRIHTHIGSGSDPAVWQ 206

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY------- 230
               +  +       +E ++LGGG       Y        +    +              
Sbjct: 207 KTSGMSLDLCREFPTVETLNLGGGYKVGRMAYEKSTDLAVVGAPVKALFEAFAKETGREL 266

Query: 231 ---LEPGEAIVTNTTTLNTTVLDISEN------IKNLVIVDSSVEAHVPDYLLYQESATI 281
              +EPG  ++ N+  +  TV D              + +D+ +   +   L   +   +
Sbjct: 267 RLEIEPGTFLLANSCAIVCTVQDKVTTGAASDGGHVFLKLDAGMTEVLRPSLYAAQHPLV 326

Query: 282 Y-------PNTGPYTAMVCGRSCLAGDIFGE---------FHFEKPVKIGDRISFEDVAG 325
                      G    +V G  C +GD+                  V+ GD +  E    
Sbjct: 327 TVSAATGKEPEGTEKYVVVGHCCESGDLMTPGPDDAEEIAERAMGEVERGDLLVVEGAGA 386

Query: 326 YNINRKN-WFNGINMPTIAVKNVDGTIKAIR-EFSYNDYYNN 365
           Y        +N        ++  +GT   IR + S      N
Sbjct: 387 YCAGMSGKNYNSFPEAPEVMRTAEGTFHVIRKKQSLEQIMAN 428


>gi|293189484|ref|ZP_06608204.1| diaminopimelate decarboxylase [Actinomyces odontolyticus F0309]
 gi|292821574|gb|EFF80513.1| diaminopimelate decarboxylase [Actinomyces odontolyticus F0309]
          Length = 466

 Score =  173 bits (439), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 52/413 (12%), Positives = 115/413 (27%), Gaps = 51/413 (12%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMDG 54
            TP +++D + +                      G     A K F +  +   +     G
Sbjct: 48  GTPTFVLDVEAMRGRARVWASAMAEEFWDGYGMNGGDAFYAGKAFLSADVARLVAAEGMG 107

Query: 55  TTSSSLYEVMLG-HEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA 111
             ++SL E+ L      G +    +   K       A+ +    I  +++ ++++ +  A
Sbjct: 108 IDTASLGELSLALRAGVGPDRIGLHGNNKSDAEIRLALQAGIHRIFIDSMDEVHQIERIA 167

Query: 112 QKLHKKIGLRIN--PSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNG 160
             L     + +     +               + G         E      ++   +  G
Sbjct: 168 ADLGVVAPVMVRLKSGIHAGGNEYIATAHEDQKFGLSLATGQAYEAVAVIKDAAHLDFRG 227

Query: 161 LMFHNNCENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF-- 214
           L  H   +             ++             +  I LGGG+              
Sbjct: 228 LHSHIGSQIFGTEAFAEAARIVIDFAALLKAELGLDVPAIDLGGGVGIAYTGQDPVPTSP 287

Query: 215 -------CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENI------KNL 258
                     ++E    +      + +EPG +I   +  +   V  + +        +  
Sbjct: 288 VEVARALATVVRERCAHHGLPIPHVSVEPGRSIAGPSMVMLYRVGVVKDISLEDGGVRRY 347

Query: 259 VIVDSSVEAHVPDYLLYQESATIYPNTGPY------TAMVCGRSCLAGDIFGEFHFEK-P 311
           V +D  +  ++   L          N  P          + G+ C +GDI          
Sbjct: 348 VAIDGGMSDNIRPVLYDAAYTATLANRDPADASELARCRIVGKHCESGDIIIRDIDLPAD 407

Query: 312 VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +  GD ++   V  Y  +  + +N +  P +           IR  + +    
Sbjct: 408 IAGGDLLAVPAVGAYGYSMASNYNMLTKPGVLAVEDGSARWFIRPQTVDHLLA 460


>gi|323447664|gb|EGB03577.1| hypothetical protein AURANDRAFT_39321 [Aureococcus anophagefferens]
          Length = 463

 Score =  173 bits (439), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 71/402 (17%), Positives = 127/402 (31%), Gaps = 42/402 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D   L+   + AL      GV +  A+K      +            +SS+YE
Sbjct: 56  GTPCYVYDAPTLVARAEEALAFPNAFGVTVRYAMKACPNGAVLRLFESMGLHFDASSVYE 115

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           V             + +    D +   ++     +   +++QL  F   A      +G+R
Sbjct: 116 VRRALAAGIAASKISLSTQQLDDDFGDLVKEGLKVNACSLAQLEAFG--AAFPGADVGVR 173

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIE------SEIKNVNGLMFHNNCENKSFLCF 175
            NP V        +   P S  G   +D  E          NV  +  H    + + +  
Sbjct: 174 FNPGVGSGGTSKTNVGGPSSSFGIWHEDFDEVAAIAGKHDLNVVRVHTHIGSGSDAAVWQ 233

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEKYSVQI-- 229
             + +            ++ ++LGGG       Y     +    + +K   E Y+ +   
Sbjct: 234 R-VSRMSLDLCERLGGTVKTLNLGGGYKVGRMAYEQSTDLSVVGEPVKAEFEAYAERTGD 292

Query: 230 ----YLEPGEAIVTNTTTLNTTVLDISENI-----KNLVIVDSSVEAHVPDYLLYQESAT 280
                +EPG  +V N   L TT+ D++         + + +D  +   +   L   +   
Sbjct: 293 ELKLEVEPGTFLVANAGALVTTIQDVTSTKGSEAGNDFLKLDCGMTEVLRPSLYGAQHPL 352

Query: 281 IYP------NTGPYTAMVCGRSCLAGDIFGEF---------HFEKPVKIGDRISFEDVAG 325
           +        N      +V G  C +GD+                     GD +  E V  
Sbjct: 353 VVVKRDGTLNDEHKPYVVVGHCCESGDLLTPAPDEPETLASRDLAAADRGDLMVVESVGA 412

Query: 326 YNINRKN-WFNGINMPTIAVKNVDGTIKAIR-EFSYNDYYNN 365
           Y        +N        + + DG    IR   S +    N
Sbjct: 413 YCAAMSTAGYNSFPSAPEVLHDKDGNFHLIRKRSSLDQLTMN 454


>gi|209526903|ref|ZP_03275422.1| Diaminopimelate decarboxylase [Arthrospira maxima CS-328]
 gi|209492682|gb|EDZ93018.1| Diaminopimelate decarboxylase [Arthrospira maxima CS-328]
          Length = 413

 Score =  173 bits (438), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 52/374 (13%), Positives = 120/374 (32%), Gaps = 17/374 (4%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+ +   L + ++           +   A        +     Q   G  +++  +
Sbjct: 32  GSPLYVYNADILQDTINHIGGAVNYPKTRFKFASVTNGNIALLKIFQQANWGLHANTPGD 91

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
             LG    F  +   Y+ +  +     +L N        +++ QL  F +  Q+L     
Sbjct: 92  AFLGLKAGFHPQQIVYSGSNLNHREFQLLLNWGITTYNLDSLDQLQLFGEVFQQLKLDFL 151

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
            ++   ++  +           +   +      S    + GL F+      +   F+ ++
Sbjct: 152 PKLGFRLNLPEINGDSRIGVNPQEFPEAIKIAASAGLKITGLHFYRGTGTNATSSFTQVI 211

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSE------KYSVQI 229
           K      G  +   +++  GGG  +  +     +    F Q++              + +
Sbjct: 212 K-PLLAIGQQLPDWQYLDFGGGFGYPYQHQKSAFDWHFFGQQITAELTQLNRELNREIDL 270

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPNTGPY 288
            +EPG + + +  TL T V+         ++   +  A++    +       +  +  P 
Sbjct: 271 IIEPGRSAIASCGTLLTQVVSTKWQPPKQIVGVDTTVANLSVPSVYGNYREIVSFSDTPN 330

Query: 289 TA--MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
                VCG +  + D  G+      +K GD ++  D   Y     + F     P   +  
Sbjct: 331 HYITDVCGNTTYSRDYLGKNRQLPQLKRGDILAILDCGAYGYAMSSHFLHRPRPAEVLLQ 390

Query: 347 VDGTIKAIREFSYN 360
                   +   YN
Sbjct: 391 QGKHQLIRQREDYN 404


>gi|217077735|ref|YP_002335453.1| ornithine decarboxylase [Thermosipho africanus TCF52B]
 gi|217037590|gb|ACJ76112.1| ornithine decarboxylase [Thermosipho africanus TCF52B]
          Length = 387

 Score =  173 bits (438), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 57/375 (15%), Positives = 123/375 (32%), Gaps = 22/375 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP  ++D + + +N    +   KN+  K+  A+K  +   +   L         +S  E
Sbjct: 18  GTPILVMDLEVVRDNYKRLVENVKNS--KIYYAVKANSHIEILKLLRDLGSYFDVASRPE 75

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIF--NTVSQLNKFKDKAQKLHKKIG 119
           +          E  ++    K     A        +F  ++  ++ K    A      + 
Sbjct: 76  IEKLLSIGVEPERMSFGNTIKKSSDIAFAYEKGIKMFAVDSEMEIEKIAKNAPGSDIYVR 135

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +  N     + + L                   S   N  G+ FH   +N +   +   +
Sbjct: 136 ISTNGMEDDADWPLTKKFGTSVDHAISLVKYAYSLGLNPIGVSFHVGSQNYNPENWRVAI 195

Query: 180 KNIEKEFGH---FITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKY---SVQIYL 231
           + +   F        +++ ++ GGG+          V++    + E    Y    V + L
Sbjct: 196 REVSVVFEEARRMGIEMKMVNTGGGMPVKYSKNIPTVEEISAVINEAIADYIGEDVTVIL 255

Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGP 287
           EPG ++V N  T+ T+V+  S+  +   I   +   H     +      +      +   
Sbjct: 256 EPGRSMVGNAGTMITSVILRSQKGEEKWIYTDAGVFHGLTETIQNIRYEVEVIGKEDEEK 315

Query: 288 YTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
              ++ G +C + D+            + D +   +   Y       FNGI  P I    
Sbjct: 316 EKFVLAGPTCDSVDVMYYDINLPKTTTMDDLVVLYNTGAYTTEYGTNFNGIPSPKIIF-- 373

Query: 347 VDGTIKAIREFSYND 361
              +   +++  + +
Sbjct: 374 --ESSIFVKQELFEE 386


>gi|325919586|ref|ZP_08181598.1| diaminopimelate decarboxylase ;aspartate kinase [Xanthomonas
           gardneri ATCC 19865]
 gi|325549922|gb|EGD20764.1| diaminopimelate decarboxylase ;aspartate kinase [Xanthomonas
           gardneri ATCC 19865]
          Length = 869

 Score =  173 bits (438), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 52/365 (14%), Positives = 111/365 (30%), Gaps = 26/365 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+     +         I      +   A+K  A   +   L Q   G    S  E
Sbjct: 506 GTPRYVYHLPTVRARAHALAQIAAVD--QRYYAIKANAHPAILMALEQAGFGLECVSHGE 563

Query: 63  VMLGHEKFG---GETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           +    +           +  ++    E +A  +   T+  + V  L ++ +      + +
Sbjct: 564 LRRVFDTLPELSPRRVLFTPSFAPKAEYEAGFALGVTVTVDNVEALRRWPEV--FRGRNV 621

Query: 119 GLRINPSVSYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNCENKSF 172
            LRI+           +     S+ G      ++  +   +    + G+  H     ++ 
Sbjct: 622 WLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVELARTLEVTITGVHAHLGSGVETG 681

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-----V 227
             +  M   +          +E I +GGG+             +   +   +        
Sbjct: 682 EHWRMMYDELAGFARRIG-TVETIDIGGGLPIPYSAEDEPFDLELWAKGLAEVKAVHPGY 740

Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----ATIY 282
           ++ +EPG  +V     L   V   I ++    V +D+ +   +   L          +  
Sbjct: 741 RLAIEPGRYLVAEAGVLLAQVTQVIEKDGVQRVGLDAGMNTLIRPALYDAWHDIENLSQL 800

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPV-KIGDRISFEDVAGYNINRKNWFNGINMPT 341
                    + G  C + D+FG+          GD +   D   Y  +  + +N   +P 
Sbjct: 801 DAPADGAFDIVGPICESSDVFGKRRRLPAATAPGDVMLVADSGAYGYSMASTYNQRELPR 860

Query: 342 IAVKN 346
             V +
Sbjct: 861 EEVID 865


>gi|195953881|ref|YP_002122171.1| Ornithine decarboxylase [Hydrogenobaculum sp. Y04AAS1]
 gi|195933493|gb|ACG58193.1| Ornithine decarboxylase [Hydrogenobaculum sp. Y04AAS1]
          Length = 400

 Score =  173 bits (438), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 59/364 (16%), Positives = 118/364 (32%), Gaps = 26/364 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTP  +I+  ++           K    K+  A+K      +   LN    G   +S +
Sbjct: 43  VKTPTLVINLDRIKERFIELQEALKE--AKIYYAVKANDHQEILALLNDLGSGYEVASSW 100

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118
           E+         G     +   K  +               ++  +++K K  A +    I
Sbjct: 101 ELEKVLRLGVDGSRIISSNPVKPLDFIDYAYKSGIKAFSIDSYKEIDKLKKIAPRSRVYI 160

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFS 176
            L +    S             + L         ++ +     G+ FH   +  +   + 
Sbjct: 161 RLIVPNEGSDWPLTNKFGVDVDTALDI----LEYAKYQGFVPYGITFHVGSQCNNLRNWF 216

Query: 177 AMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYP------VKDFCQRLKEFSEKYSV 227
             +K   + +        ++  ++LGGGI    +                L+++     +
Sbjct: 217 IGIKKAWELWEKAIYKDIKLTMLNLGGGIPVNYQYESLSIRDIGSYIEALLQKYFLIKPM 276

Query: 228 QIYLEPGEAIVTNTTTLNTTVL-----DISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
           ++ +EPG  +V +   L ++V+      I+      + +D+ V   + + L         
Sbjct: 277 EVQIEPGRGLVGDAGVLVSSVIGKTTKYINGEESYWIYLDTGVFNGLAEVLGGISYPMYA 336

Query: 283 PNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
              G      + G SC + DI   F +   V IGDR+       Y       FNG  +P 
Sbjct: 337 EQKGEIKPYTIAGVSCDSMDIISNFTYLPEVDIGDRVYIMATGAYTTVYAANFNGFGIPE 396

Query: 342 IAVK 345
               
Sbjct: 397 TVFV 400


>gi|260906191|ref|ZP_05914513.1| diaminopimelate decarboxylase [Brevibacterium linens BL2]
          Length = 478

 Score =  173 bits (437), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 63/409 (15%), Positives = 120/409 (29%), Gaps = 47/409 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYI--------RKNAGVKLLLALKCFAAWGMFDTLNQYMDG 54
            TP  ++D        +  +          +  AGV +  A K F    +   +++   G
Sbjct: 59  GTPTLVMDVADFKARAENYVSAYSAAFSEDKGLAGVDVFYAGKAFLCTAVARWVHESGLG 118

Query: 55  TTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA 111
             + SL E+M+       GE    +   K               I  +++ +++  +  A
Sbjct: 119 VDTCSLGEMMVARAAGVPGERVGLHGNNKSAAELEYALDYGVGRIFVDSLDEISLLESIA 178

Query: 112 --QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI---------ESEIKNVNG 160
             + +   + LR+   V               + G                 S     +G
Sbjct: 179 AARGVLAPVMLRVTVGVEAHTHDFIATAHEDQKFGLSVSAGTAAKAAEAVANSAHLRFDG 238

Query: 161 LMFHNNCENKSFLCFSAMLKNIEKE----FGHFITQIEWISLGGGIHFTDKDYPVKDFCQ 216
           L  H   +      F      +              +  I LGGG               
Sbjct: 239 LHSHIGSQIFDISGFQVAAARVLALRAEIMAEHGVDLPDIDLGGGFGIRYTSQDTPIPVA 298

Query: 217 RLKEFSEK-----------YSVQIYLEPGEAIVTNTTTLNTTV-----LDISENIKNLVI 260
            + +   +              +I +EPG AIV+ +      V     +D    ++  V 
Sbjct: 299 EMAQELAEVVAKECRGLGTNVPRISIEPGRAIVSPSMFTLYQVGTVKEVDTDNGLRTYVA 358

Query: 261 VDSSVEAHVPDYLLYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFE-KPVKIG 315
           VD  +  ++   L   + +    N    + P    V G+ C +GDI     +    V  G
Sbjct: 359 VDGGMSDNIRTALYDADYSCTLANRNSGSEPVIVRVVGKHCESGDIIVRDEYMGSDVSSG 418

Query: 316 DRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           D ++      Y  +  N +N +  P +     D     +    Y+    
Sbjct: 419 DLVAVPSTGAYCRSLANNYNHLPKPGVLAVTTDKVEWIVTPEDYSQMLR 467


>gi|327261305|ref|XP_003215471.1| PREDICTED: ornithine decarboxylase-like [Anolis carolinensis]
          Length = 460

 Score =  173 bits (437), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 65/394 (16%), Positives = 118/394 (29%), Gaps = 46/394 (11%)

Query: 6   YYLIDK-QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           +Y+ D    L  +L           V    A+KC  +  +   L     G   +S  E+ 
Sbjct: 40  FYVADLGDVLKKHLRWYK---ALPRVSPFYAVKCNDSIAVVKILAALGAGFDCASKTEIQ 96

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           L        E   Y    K        +N    +    S++   K        K+ LRI 
Sbjct: 97  LVQSVGVPPERIIYANPCKQVSQIKHAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIA 156

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S +   L+       +      ++ +    ++ G+ FH          F   + +  
Sbjct: 157 TDDSKAVCRLSVKFGATLKTSRLLLERAKELDLDIIGVSFHVGSGCTDPETFVQAISDAR 216

Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPG 234
             F         +  + +GGG   ++      +           K F     V+I  EPG
Sbjct: 217 CVFDMGAELGFSMYLLDIGGGFPGSEDVKLKFEEITNVINPALDKYFPSDSGVKIIAEPG 276

Query: 235 EAIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHV 269
              V +  TL   ++                          +++ +           AHV
Sbjct: 277 RYYVASAFTLAVNIIAKKVVIKEQTGSDDEEEQNDKTLMYYVNDGVYGSFNCILYDHAHV 336

Query: 270 PDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
              L  +           Y+  + G +C   D   E      +++GD + FE++  Y + 
Sbjct: 337 KPVLQKRPKPDERY----YSCSIWGPTCDGLDRIVELCAMPELQVGDWMLFENMGAYTVA 392

Query: 330 RKNWFNGINMPTIAVKNVDGTIKA---IREFSYN 360
             + FNG   PTI         +    I+E  + 
Sbjct: 393 AASTFNGFQRPTIYYVMSRPAWQLMEQIKEQGFQ 426


>gi|289667155|ref|ZP_06488230.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein
           [Xanthomonas campestris pv. musacearum NCPPB4381]
          Length = 711

 Score =  173 bits (437), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 54/365 (14%), Positives = 109/365 (29%), Gaps = 26/365 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y      +         I      +   A+K  A   +   L Q   G    S  E
Sbjct: 348 GTPRYAYHLPTVRERAHALAQIAAVD--QRYYAIKANAHPAILIALEQAGFGLECVSHGE 405

Query: 63  VMLGHEKFG---GETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           +    +           +  ++    E +A  +   T+  + V  L  +        + I
Sbjct: 406 LRRVFQALPELSPRRVLFTPSFAPKAEYEAAFALGVTVTVDNVEALRNWPQL--FRGRNI 463

Query: 119 GLRINPSVSYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNCENKSF 172
            LRI+           +     S+ G      ++  +   +    + G+  H     ++ 
Sbjct: 464 WLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVEVARTLEVTITGVHAHLGSGVETG 523

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-----V 227
             +  M   +          +E I +GGG+                 +   +        
Sbjct: 524 EHWRMMYDELAGFARRIG-TVETIDIGGGLPIPYSAEDEPFDLDVWAKGLAEVKAVHPGY 582

Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----ATIY 282
           ++ +EPG  +V     L  +V   I ++    V +D+ +   +   L          +  
Sbjct: 583 RLAIEPGRYLVAEAGVLIASVTQVIEKDGVERVGLDAGMNTLMRPALYDAWHDIENLSRL 642

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPV-KIGDRISFEDVAGYNINRKNWFNGINMPT 341
                 T  + G  C + D+FG+          GD +   D   Y  +  + +N   +P 
Sbjct: 643 DAPADGTFDIVGPICESSDVFGKRRRLPSATAPGDVVLVADTGAYGYSMASTYNQRELPR 702

Query: 342 IAVKN 346
             V +
Sbjct: 703 EEVID 707


>gi|239617956|ref|YP_002941278.1| Ornithine decarboxylase [Kosmotoga olearia TBF 19.5.1]
 gi|239506787|gb|ACR80274.1| Ornithine decarboxylase [Kosmotoga olearia TBF 19.5.1]
          Length = 386

 Score =  173 bits (437), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 56/364 (15%), Positives = 128/364 (35%), Gaps = 21/364 (5%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           +++TP+ ++D + +  N      +R    V++  A+K  +   +   L         +S 
Sbjct: 13  VLQTPFLVMDLKYVEKNYYDL--VRNIKDVRVFYAVKANSHPRIISLLRDLGSSFDVASR 70

Query: 61  YEVMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+          E  ++       +    A     +    ++  ++ K    A      
Sbjct: 71  GEIEKLLSLDVPAEKLSFGNTIKKVEDIAYAHSVGIEYFAVDSEMEVEKIAAHAPGSKVY 130

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
             +  + + S     L+              +       +  G+ FH   +N S   +  
Sbjct: 131 GRIATSGADSDW--PLSRKFGTDVEHVISILEYASRLGLDAYGVSFHVGSQNYSVKNWET 188

Query: 178 MLKNIEKEF---GHFITQIEWISLGGGIH--FTDKDYPVKDFCQRLKEFSEKY-----SV 227
            +++  K F         +  ++LGGGI      +   +++    +    EKY     ++
Sbjct: 189 AIQDASKVFKALRAKGVNLRMLNLGGGIPVKHVREIPSIEEIAACINASIEKYLGFVPNL 248

Query: 228 QIYLEPGEAIVTNTTTLNTTVL-DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286
           ++++EPG ++V +   + T+V+    +  ++ + +D+ V   + + +       I     
Sbjct: 249 EVFIEPGRSMVGDAGIMVTSVILKSKKGNEDWLYIDAGVFHGLTETIENFRYEVITDVED 308

Query: 287 P--YTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343
               T  + G SC + D   +       +  GD + F +   Y       FNGI  P I 
Sbjct: 309 NNLKTFHLAGPSCDSVDTIYDDIKLPRSISYGDILYFLNAGAYTTEYGTHFNGIEPPRIY 368

Query: 344 VKNV 347
             + 
Sbjct: 369 FVDE 372


>gi|227872752|ref|ZP_03991075.1| possible diaminopimelate decarboxylase [Oribacterium sinus F0268]
 gi|227841413|gb|EEJ51720.1| possible diaminopimelate decarboxylase [Oribacterium sinus F0268]
          Length = 394

 Score =  172 bits (436), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 60/380 (15%), Positives = 117/380 (30%), Gaps = 29/380 (7%)

Query: 16  NNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGE 73
           +           N G K   A+K      +   L +   G   SS  E+ +     F G+
Sbjct: 1   DTARKLYKAFSWNPGFKEYFAIKATPNTAILRILKEEGCGVDCSSKVELTMAEACGFKGQ 60

Query: 74  THAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFI 132
              ++     + E          I  +  S + + ++    L K + LR NP   +    
Sbjct: 61  EIMFSSNDTPEEEYIFAKELGGIINLDDFSNIAEVEETLGTLPKTMSLRFNPGGYFKIAN 120

Query: 133 LADPNRPFSRLGEKCKDKIE----SEIKNVNGLMFH------NNCENKSFLCFSAMLKNI 182
               N   ++ G      +E     + K V     H              +    + + +
Sbjct: 121 TIMDNPEEAKFGMTEAQILEGYKILKEKGVEHFGIHAFLASNTVSNEYYPVLARQLFQLV 180

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-----------SVQIYL 231
            +        +++++L GGI    +     +    + +  ++             +++  
Sbjct: 181 VRIKKELGISLDFVNLSGGIGIPYRPEQEPNDILLIGQGVKEVFEEILVPNGLGHIRLCT 240

Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY--- 288
           E G  ++     L T V+   E  ++   VD+     +   +                  
Sbjct: 241 ELGRFMLAPYGALITKVIHFKETYRHYAGVDACAANLMRPAIYDAYHHITVLGKEEEKET 300

Query: 289 -TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
            T  V G  C   D F +      ++ GD + F D   +       +NG       +   
Sbjct: 301 KTYDVVGSLCENNDKFAKNRELPVLEKGDYLFFHDAGAHGFAMGYNYNGKLWCAELLLKE 360

Query: 348 DGTIKAIRE-FSYNDYYNNL 366
           DGT+K IR      DY+  L
Sbjct: 361 DGTVKCIRRAQRDTDYFATL 380


>gi|148272332|ref|YP_001221893.1| hypothetical protein CMM_1152 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147830262|emb|CAN01196.1| lysA [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
          Length = 499

 Score =  172 bits (436), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 55/432 (12%), Positives = 110/432 (25%), Gaps = 69/432 (15%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN------AGVKLLLALKCFAAWGMFDTLNQYMDGTT 56
            TP Y++D+  +       L              ++  A K F +  +   + +      
Sbjct: 52  GTPLYVMDEDDVRGRAAETLAAFTREAAAVGTSARVYYAGKAFLSIEVARWMVEEGLHID 111

Query: 57  SSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQK 113
             S  E+ +            ++   K               I+ ++  ++ +    A  
Sbjct: 112 VCSGGELAVALAGGADPARLGFHGNNKSVAEIDRAVGAGIGQIVVDSAIEVERVAAAAAA 171

Query: 114 L--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFH 164
               + + LR+N  V           R   + G    D              +  GL  H
Sbjct: 172 HGRVQPVRLRVNSGVHAHTHEYLATAREDQKFGITLADAPGLVARIRSHATLSFTGLHAH 231

Query: 165 NNCENKSFLCFSAMLKNIEKEFGHFITQ--IEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
              +      F    + +       +    +  ++LGGG                +    
Sbjct: 232 IGSQIFETDAFVESARRLLDLHERLLADGPVPELNLGGGFGIAYTSVDRPVPVPEIARRL 291

Query: 223 EK-----------YSVQIYLEPGEAIVTNTTTLNTTVLDISE------------------ 253
                            I +EPG +IV  +T    TV  + +                  
Sbjct: 292 AHIVGDECGRRGISVPVIAVEPGRSIVGPSTVTLYTVGTVKDVLVTVGGVDGEVAEASSA 351

Query: 254 ---------------NIKNLVIVDSSVEAHVPDYLLYQ----ESATIYPNTGPYTAMVCG 294
                           ++  V VD  +  +    L         A       P    + G
Sbjct: 352 TGDVEDPRVAEEAETAVRRYVSVDGGMSDNARPALYGADYSVRIAGRASAADPALVRIAG 411

Query: 295 RSCLAGD-IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353
           + C +GD +    +    V+  D ++      Y     + +N I  P +           
Sbjct: 412 KHCESGDLVVLADYLPGDVRADDLVAVPATGAYCWALASNYNWIGRPPVVAVRDGEARVI 471

Query: 354 IREFSYNDYYNN 365
           +R  +  D    
Sbjct: 472 VRGETEADLLAR 483


>gi|323141851|ref|ZP_08076715.1| lysine/ornithine decarboxylase [Phascolarctobacterium sp. YIT
           12067]
 gi|322413691|gb|EFY04546.1| lysine/ornithine decarboxylase [Phascolarctobacterium sp. YIT
           12067]
          Length = 401

 Score =  172 bits (436), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 54/359 (15%), Positives = 114/359 (31%), Gaps = 18/359 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP  ++  +++  N            VK+  A+K      +   +         +S  E
Sbjct: 22  GTPLLVLSLEEIKKNYKVLKKYMPR--VKIHYAIKANPHPEILRVMADMGSCFDVASDGE 79

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +   H+    G    Y    K               + F++ S+++K K +       + 
Sbjct: 80  IRTMHDMGVDGGRLIYANPVKTGVGLEACRSCGVRKMTFDSASEIDKIKKQCPDATVLLR 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           LRI+ S ++            + L      + +    ++ G+ FH   +  S   +   L
Sbjct: 140 LRIDNSSAHVDLNKKFGAARENALA--LMQQAKEAGLDMAGIAFHVGSQTVSADPYLHAL 197

Query: 180 KNIEKEFGHF---ITQIEWISLGGGIHFTDKD--YPVKDFCQRLKEFSEKYSVQ--IYLE 232
               + F        ++  + +GGG    +    + + +  +++    ++      I+ E
Sbjct: 198 DIARELFEEAEAAGLKLRILDVGGGFPIPEPKVKFNLPEMLRQINARLDEDFADAEIWAE 257

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVD----SSVEAHVPDYLLYQESATIYPNTGPY 288
           PG  I      L T+V+ ++E                 + V       +  +        
Sbjct: 258 PGRYICGTAVNLITSVIGVTERGGQPWYFLNEGLYGTFSGVLFDQWDFKLISFREGEEKV 317

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
            A   G SC + DI        P+++GD +       Y       FNG +     +   
Sbjct: 318 AATFAGPSCDSLDIMFRGRLTVPLQVGDLLLVPSCGAYTSASATTFNGFSKAKFVIWER 376


>gi|309798991|ref|ZP_07693248.1| diaminopimelate decarboxylase [Streptococcus infantis SK1302]
 gi|308117395|gb|EFO54814.1| diaminopimelate decarboxylase [Streptococcus infantis SK1302]
          Length = 394

 Score =  172 bits (436), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 52/366 (14%), Positives = 104/366 (28%), Gaps = 28/366 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   SS  
Sbjct: 19  PTPFHLYDEKGIREKARAVNKAFSWNKGFKEYFAVKATPTPAILKILQEEGCGVDCSSYV 78

Query: 62  EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++ H+  F G    ++     D E         TI  +    +   +  A        
Sbjct: 79  ELLMSHKLGFTGADMMFSSNNTPDREYAYARELGATINLDAFEDIEHLERAAGIPEIISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVN-GLMFHNNCEN 169
                 V      + D     ++ G   +   E+         +   ++  L  +     
Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKEQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                   + +   +        +++I+L GGI    +     +    + E   +   + 
Sbjct: 198 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEPNDIALIGEGVRQVYEEV 257

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                     I+ E G  ++     L T V    +  +  + VD+S    +   +     
Sbjct: 258 LTPAGLGQVKIFTELGRFMLAPHGILVTKVTHKKKTYRTYLGVDASAVNLMRPAMYGAYH 317

Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                           V G  C   D F         +IGD +   D   +  +    +N
Sbjct: 318 HITNMMHPDGQTEVVDVVGSLCENNDKFAVNRELPQTEIGDLLVIHDTGAHGFSMGYQYN 377

Query: 336 GINMPT 341
                 
Sbjct: 378 AKLRSA 383


>gi|315604826|ref|ZP_07879885.1| diaminopimelate decarboxylase [Actinomyces sp. oral taxon 180 str.
           F0310]
 gi|315313497|gb|EFU61555.1| diaminopimelate decarboxylase [Actinomyces sp. oral taxon 180 str.
           F0310]
          Length = 466

 Score =  172 bits (436), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 52/411 (12%), Positives = 115/411 (27%), Gaps = 49/411 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMDG 54
            TP +++D   L                     +G     A K F +  +   + +   G
Sbjct: 50  GTPTFVLDVASLRGRARVWASAMAEEFWEGYGMSGGDAFYAGKAFLSADVARIVAEEGLG 109

Query: 55  TTSSSLYEVMLG-HEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA 111
             ++SL E+ L             +   K       A+ +    I  +++ ++ + +  A
Sbjct: 110 VDTASLGELTLALRAGVDPSRIGLHGNNKSDREIRLALEAGIHRIFIDSMDEVRQVERIA 169

Query: 112 QKLHKKIGLRIN--PSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNG 160
             +     + +     +               + G         E  +    +   ++ G
Sbjct: 170 ADMGVSAPVMVRLKSGIHAGGNEYIATAHEDQKFGLSLASGQALEAVRAIQRAPHLDLRG 229

Query: 161 LMFHNNCENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF-- 214
           L  H   +             ++            ++  I LGGG+              
Sbjct: 230 LHSHIGSQIFGTAAFVEAARKVIDFAALVRERLGLEVSAIDLGGGVGIAYTAQDPVPTSP 289

Query: 215 -------CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENI------KNL 258
                     ++E    +     ++ +EPG +I   +  +   V  + +        +  
Sbjct: 290 VEVARALAGVVRERCAHHGLPIPRVTVEPGRSIAGPSMVMLYRVGVVKDVSLEGGGVRRY 349

Query: 259 VIVDSSVEAHVPDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEK-PVK 313
           V +D  +  ++   L          N    T      V G+ C +GDI          + 
Sbjct: 350 VAIDGGMSDNIRPVLYGAAYTATLANRDGSTALARCRVVGKHCESGDIVVRDVDLPADIA 409

Query: 314 IGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            GD ++   V  Y  +  + +N    P +           +R  S +    
Sbjct: 410 GGDLLAVPAVGAYGYSMASNYNMATKPGVLAVEDGEAHWFLRPQSVDHLLA 460


>gi|289664589|ref|ZP_06486170.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein
           [Xanthomonas campestris pv. vasculorum NCPPB702]
          Length = 869

 Score =  172 bits (436), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 54/365 (14%), Positives = 110/365 (30%), Gaps = 26/365 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y      +         I      +   A+K  A   +   L Q   G    S  E
Sbjct: 506 GTPRYAYHLPTVRERAHALAQIAAVD--QRYYAIKANAHPAILIALEQAGFGLECVSHGE 563

Query: 63  VMLGHEKFG---GETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           +    +           +  ++    E +A  +   T+  + V  L  + +      + I
Sbjct: 564 LRRVFQALPELSPRRVLFTPSFAPKAEYEAAFALGVTVTVDNVEALRNWPEL--FRGRNI 621

Query: 119 GLRINPSVSYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNCENKSF 172
            LRI+           +     S+ G      ++  +   +    + G+  H     ++ 
Sbjct: 622 WLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVEVARTLEVTITGVHAHLGSGVETG 681

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-----V 227
             +  M   +          +E I +GGG+                 +   +        
Sbjct: 682 EHWRMMYDELAGFARRIG-TVETIDIGGGLPIPYSAEDEPFDLDVWAKGLAEVKAVHPGY 740

Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----ATIY 282
           ++ +EPG  +V     L  +V   I ++    V +D+ +   +   L          +  
Sbjct: 741 RLAIEPGRYLVAEAGVLIASVTQVIEKDGVERVGLDAGMNTLMRPALYDAWHDIENLSRL 800

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPV-KIGDRISFEDVAGYNINRKNWFNGINMPT 341
                 T  + G  C + D+FG+          GD +   D   Y  +  + +N   +P 
Sbjct: 801 DAPADGTFDIVGPICESSDVFGKRRRLPSATAPGDVVLVADTGAYGYSMASTYNQRELPR 860

Query: 342 IAVKN 346
             V +
Sbjct: 861 EEVID 865


>gi|227536835|ref|ZP_03966884.1| diaminopimelate decarboxylase [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227243262|gb|EEI93277.1| diaminopimelate decarboxylase [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 355

 Score =  172 bits (436), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 61/335 (18%), Positives = 105/335 (31%), Gaps = 26/335 (7%)

Query: 29  GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEID 87
           G  +  ALK      +   +     G    S  EV    E  F  +   +    K  +  
Sbjct: 9   GFHVHYALKANFNDRILQLIQAKGFGADCVSGNEVKKSIETGFKADKITFAGVGKSDKEI 68

Query: 88  AVLSNCDTI--IFNTVSQLNKFKDKA--QKLHKKIGLRINPSVSYSKFILADPNRPFSRL 143
                 +       ++ ++      A        + LRINP+V              ++ 
Sbjct: 69  RYALAHEIFAFNVESIEEMEVINALAGETGQIANVSLRINPNVDAQTHHYITTGLDENKF 128

Query: 144 GEKCKDK-------IESEIKNVNGLMFHNNCEN---KSFLCFSAMLKNIEKEFGHFITQI 193
           G    +         ES+  N+ GL FH   +      F      +   +  F    T I
Sbjct: 129 GIPNSELEKSAAILRESKHLNLVGLHFHIGSQIVDLNVFKSLCVKVNEWKNWFEERGTTI 188

Query: 194 EWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSVQ-IYLEPGEAIVTNTTTLNT 246
           + +++GGG+               + +      F E+ S Q ++ E G A+V    +L +
Sbjct: 189 KVLNVGGGLGVDYKDPDGNPVTDFEAYFDIFDRFLERNSHQEVHFELGRALVAQCGSLLS 248

Query: 247 TVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT---AMVCGRSCLAGDI 302
            VL       KN +I+D+ +   +   L                     V G  C + D 
Sbjct: 249 RVLYTKSGIKKNFLILDAGMTELMRPALYQAYHKIERVGESDQEEINYDVVGPICESSDC 308

Query: 303 FGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
           FG+       K GD I+      Y     + +N  
Sbjct: 309 FGKEVPLPVSKRGDLIAIRTAGAYGEVMSSHYNLR 343


>gi|313680960|ref|YP_004058699.1| diaminopimelate decarboxylase [Oceanithermus profundus DSM 14977]
 gi|313153675|gb|ADR37526.1| diaminopimelate decarboxylase [Oceanithermus profundus DSM 14977]
          Length = 394

 Score =  172 bits (436), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 63/368 (17%), Positives = 127/368 (34%), Gaps = 20/368 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y  D +++       L        ++  ALK      + + L     G  + SL 
Sbjct: 20  VPTPFYAYDLRRIEERTRRYLEAF--PTARVFYALKANPRLRLLERLRSQGLGAEAVSLG 77

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           EV+  +   F  +    N   K  E+  +   S   T++ ++ + L +   +      ++
Sbjct: 78  EVVRAYVAGFMPDEVVLNGPVKPPEVLGELARSGVPTLVADSRADLERIAQR--LPEARV 135

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKI------ESEIKNVNGLMFHNNCENKSF 172
            LR+NP +           R  S+ G   +D              + GL  H      + 
Sbjct: 136 LLRLNPDLPVDTHPHLATGRGDSQFGVLPEDWPDVFARGRELGLEMRGLHVHLGSNLHNP 195

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232
             F+A L+ +++        +E + LGGG          +D    +   +  Y  ++++E
Sbjct: 196 ADFAARLEVLQRLRERVGP-LEVLDLGGGFGLD---LDPRDLAPGMFALARAYGAELWIE 251

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT--A 290
           PG A+V +   L   V       +  +++D+ + A +   L               T   
Sbjct: 252 PGRALVADAGVLVARVWAEKRTRRRYLLLDAGMTAFLRPLLYGARHPVRPLYASERTAVY 311

Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGT 350
            + G +C +GD+          + GD ++F +   Y       +     P     +    
Sbjct: 312 DLAGPACESGDVLARDVELPVPREGDAVAFLEAGAYGEAMHLDYLDHPRPGAYAWD-GAR 370

Query: 351 IKAIREFS 358
            +  R   
Sbjct: 371 WEVWRRPG 378


>gi|282896355|ref|ZP_06304377.1| Diaminopimelate decarboxylase [Raphidiopsis brookii D9]
 gi|281198851|gb|EFA73730.1| Diaminopimelate decarboxylase [Raphidiopsis brookii D9]
          Length = 396

 Score =  172 bits (435), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 54/385 (14%), Positives = 121/385 (31%), Gaps = 23/385 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+ D   L   +       K    +   A        +         G  +++  +
Sbjct: 10  GSPLYVYDSDILNQTIAHITKSFKYPETRFYFATVTNGNIALLKVFKNAHWGLHANTPGD 69

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + LG    F  ++  Y+    + E     +     T+  ++++Q+    +    L    G
Sbjct: 70  IYLGLSAGFAPDSIIYSGTNLNREEIEQVLSWGVTTLNLDSLAQVQLLCEVCSSLKNTAG 129

Query: 120 ----LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCEN 169
               L     ++     L       SR+G + +D   +          ++GL F+     
Sbjct: 130 KGKNLNTFSRLNQLDIGLRLNVGGESRIGVRLQDFNTAIAIAKNVGLEISGLHFYRGTGT 189

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSE-- 223
            +   F+  +  +       +   ++I  GGG  +        +  + F   + +     
Sbjct: 190 NATKAFTDAIDEVL-VAAQNLPHWKYIDFGGGFGYPYNHQGIAFDWELFGGEIIQRISNL 248

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282
             ++++ +EPG A + +  TL   V+ +       ++   S   ++    +       I 
Sbjct: 249 DRTIKLIIEPGRAAIASCGTLLAKVVSVKWQDNKQILGVDSTVGNIAVPSVYGGYREIIS 308

Query: 283 PNTGPYTA--MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                      +CG +  + D  G+      +++GD I   DV  Y     + F     P
Sbjct: 309 WKNHSPKYITDICGNTTYSRDYLGKNCQLPSLEMGDIIGILDVGAYGYAMSSHFLHRPKP 368

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
              +              Y+    N
Sbjct: 369 GEVLLENSQHRLIRNREDYSVLLTN 393


>gi|333028651|ref|ZP_08456715.1| putative diaminopimelate decarboxylase [Streptomyces sp. Tu6071]
 gi|332748503|gb|EGJ78944.1| putative diaminopimelate decarboxylase [Streptomyces sp. Tu6071]
          Length = 412

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 59/397 (14%), Positives = 120/397 (30%), Gaps = 36/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+ ++            +AG  +  A K F    +   L++   G    S  E
Sbjct: 14  GTPLYVLDEDQVRARARAYRAAFPDAG--VHYAAKAFLCRALVRWLDEEGIGLDVCSAGE 71

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK-LHKKI 118
           + L     F  +    +   K     A         ++ ++V ++ +          +++
Sbjct: 72  LELAVAAGFPADRVLLHGNAKSPRDLASALRLGVGRVVLDSVGEITRLAALVPPGERRRV 131

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCEN 169
            +R+ P +S              + G    D          + +    + GL  H   + 
Sbjct: 132 LVRVVPGISAGHHDKVRTGDEDQKFGLSLTDGSAQHAVARVLATPCLELTGLHCHIGSQI 191

Query: 170 ----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEF 221
                       +L    +    +   +  I LGGG     +       + D  +RL+  
Sbjct: 192 AEVKPYLAAQRRLLGLRARIAETYGVVLPEIDLGGGHAVAQRPGERGIDLTDLARRLRAE 251

Query: 222 SEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE-AHVPDYL 273
             +          ++ LEPG A+V         VL +      + +        +    L
Sbjct: 252 LAESCRAAGLPEPRLLLEPGRALVARAGVAVYRVLAVKRTAHRVFVAVDGGMGDNPRPAL 311

Query: 274 LYQESATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNI 328
                            P+   + GR C AGD+          ++ GD ++      Y +
Sbjct: 312 YGAPCVPRLVGRVSTAAPHPVDLVGRHCEAGDVLAPAVPLPADIRPGDLVATPVAGAYQL 371

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           +  + +N    P +           IR    +D +  
Sbjct: 372 SMASAYNLHGRPPLIATREGTPRLLIRREEPDDLWLR 408


>gi|19115577|ref|NP_594665.1| ornithine decarboxylase Spe1 [Schizosaccharomyces pombe 972h-]
 gi|13124099|sp|Q9UQW9|DCOR_SCHPO RecName: Full=Ornithine decarboxylase; Short=ODC
 gi|5262753|emb|CAB45689.1| ornithine decarboxylase [Schizosaccharomyces pombe]
 gi|6138895|emb|CAB59684.1| ornithine decarboxylase Spe1 [Schizosaccharomyces pombe]
          Length = 432

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 61/367 (16%), Positives = 117/367 (31%), Gaps = 30/367 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   +   L    +  K   V+   A+KC     +   LN++  G   +S  E+  
Sbjct: 69  FFVADLNGVYRQL--LRWHAKLPRVQPFYAVKCNPDPKVLALLNKFGTGFDCASKGELEQ 126

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   +   Y    K        ++    +    +    +K K    + ++ LRI+ 
Sbjct: 127 ILGLGVSPDRIVYANPCKAITYVRYAASKGINLMTFDNADELYKVKQHHPNSRLLLRIST 186

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S S   L+           K  D  +S   NV G+ FH    +     F   ++   +
Sbjct: 187 DDSNSLCRLSLKFGASLDDTGKLLDIAKSLELNVVGVSFHVGSGSYDPSAFLDAIQRSRQ 246

Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ---IYLEPGEAIV 238
            F          + + +GGG      +         ++   + Y      +  EPG   V
Sbjct: 247 VFDQGLERGFNFDLLDIGGGF----MNDSFDGVADLIRSALDTYFDPSIRVISEPGRFFV 302

Query: 239 TNTTTLNTTVLDISENIKNLVIVD-----------SSVEAHVPDY-----LLYQESATIY 282
           +++ TL   V+   +      ++              +  H            +      
Sbjct: 303 SSSFTLAVNVIAKRKLDDEEKVMYYVNDGVYGSLNCILFDHQHPVARVLKCGSRFVYNDL 362

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
             TG +   + G +C + D+          + +GD I FED   Y +   + FNG     
Sbjct: 363 VGTGQHRCFIWGPTCDSLDVIANDAHLPYELNVGDWIYFEDAGAYTVAAASCFNGFKTSR 422

Query: 342 IAVKNVD 348
           I   + D
Sbjct: 423 IVYLDTD 429


>gi|292492211|ref|YP_003527650.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Nitrosococcus halophilus Nc4]
 gi|291580806|gb|ADE15263.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Nitrosococcus halophilus Nc4]
          Length = 410

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 50/375 (13%), Positives = 104/375 (27%), Gaps = 34/375 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+Y  D++ +   +          G+ L  ALK      +   L   +DG   +SL E+
Sbjct: 37  TPFYAYDRRLISERIQQLRTHLP-PGIHLHYALKANPMPALVGYLAPLVDGLDVASLGEL 95

Query: 64  MLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            L  +     ET ++      D E+ A L+    I   +  ++ +    A+K   +  + 
Sbjct: 96  RLALDSGMPPETISFAGPGKSDNELAASLAAGIIINMESEGEMERIARLAEKQGHRPKVA 155

Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKS--- 171
           +  + +   K             G   +        I +   +  G    +  +N     
Sbjct: 156 VRVNPNFELKTSGMKMAGGPKPFGIDAERVPPMLTQIGALDFDFYGFHIFSGSQNLRAEA 215

Query: 172 -FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV--- 227
                    K   +        +  +++GGG              + +            
Sbjct: 216 IIEAQERTFKLALELARSAPGPVRLLNIGGGFGIPYFPGDKPLDLRPIANNLATSLPEVN 275

Query: 228 ------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY--------- 272
                 ++ +E G  +V         V+D   +  ++ ++ +    H             
Sbjct: 276 KQLPEAEVIIELGRYLVGEAGIYVCEVIDRKISRGHVFLITNGGLHHHLAASGNFGQVIR 335

Query: 273 -LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                        +   T  V G  C   D   +        +GD +       Y  +  
Sbjct: 336 KNYPVVVGNRIQGSARETVSVVGPLCTPLDTLADRMELACADVGDLVVVFQSGAYGRSAS 395

Query: 332 N-WFNGINMPTIAVK 345
              F     P   + 
Sbjct: 396 PLGFLSHPAPAEVLV 410


>gi|262163683|ref|ZP_06031424.1| diaminopimelate decarboxylase [Vibrio mimicus VM223]
 gi|262027899|gb|EEY46563.1| diaminopimelate decarboxylase [Vibrio mimicus VM223]
          Length = 343

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 92/331 (27%), Gaps = 24/331 (7%)

Query: 52  MDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFK 108
             G    S+ E+              ++   K       A+          +  +L++  
Sbjct: 2   GSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKIKCFNVESERELHRLN 61

Query: 109 DKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVN 159
             A +L     I LRINP V              ++ G       E           +V+
Sbjct: 62  KVAAELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAAEVYRLAHSLSNLDVH 121

Query: 160 GLMFHNNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ 216
           G+  H   +  +   F      +             I  + +GGG+    +D       +
Sbjct: 122 GIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGGLGVVYRDELPPQPSE 181

Query: 217 RLKEFSEKYSVQI----YLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPD 271
             K   ++           EPG AI  N   L T V  +         I+D+++   +  
Sbjct: 182 YAKALLDRLERHRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHKNFAIIDAAMNDLIRP 241

Query: 272 YLLYQE---SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
            L                  T  + G  C   D  G+      ++ GD ++      Y  
Sbjct: 242 ALYQAWQDIIPLRPRQGEAQTYDLVGPVCETSDFLGKDRDLV-LEEGDLLAVRSSGAYGF 300

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
              + +N        + + +      +  + 
Sbjct: 301 TMSSNYNSRPRVAEVMVDGNKAHLVRQRETL 331


>gi|302554653|ref|ZP_07306995.1| diaminopimelate decarboxylase [Streptomyces viridochromogenes DSM
           40736]
 gi|302472271|gb|EFL35364.1| diaminopimelate decarboxylase [Streptomyces viridochromogenes DSM
           40736]
          Length = 423

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 60/399 (15%), Positives = 107/399 (26%), Gaps = 38/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D   L +  +       +  V + L+LK      +   L     G   SSL E
Sbjct: 21  GTPLYVYDTDVLRHTYEELR-ALTHPAVDIYLSLKANPNISVCGYLGSLGAGAEVSSLVE 79

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQ---KLHK 116
           +          E   +    K               I+  ++ +L +  + A    +   
Sbjct: 80  LETARRAGVAAEDTIFLGPGKTRAELEACVAAGLRAIVCESLEELAEVDEMAVSAGRADV 139

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNC-- 167
            + LR+NP        LA       + G        ++          V G   +     
Sbjct: 140 PVMLRVNPDFHTKGSGLAMG-GKPRQFGIDVALLRNAKRVLKGLRRTRVIGFHAYMGTRF 198

Query: 168 --ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQ 216
                       +L            +++ +  GGG               +        
Sbjct: 199 LRHEDLIHNTREILAVASALAAETGIELDIVDFGGGFGIPYFDNEPDLNIPELAAGIDAT 258

Query: 217 RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLY 275
             +   +    ++  E G  +     T  T  L + E++ +  V+ D     H+    + 
Sbjct: 259 VTRFLEDHPDCRLINELGRYLTARCGTYVTRALYVKESMGERFVVADGGTNHHMAAVGVG 318

Query: 276 Q--------ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
                     S T Y         V G  C   D+ G+      V+ GD I  E    Y 
Sbjct: 319 SFVKRNFPIRSLTRYHAEPTGAYTVTGPLCTPNDVIGKRVALPEVRPGDLIGVERSGAYG 378

Query: 328 INRKNW-FNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            +     F     P   + +        R    +D    
Sbjct: 379 PSASPGLFLSHGFPAEVMVHEGTAHLVRRRDVLDDLLGK 417


>gi|190689523|gb|ACE86536.1| ornithine decarboxylase 1 protein [synthetic construct]
          Length = 461

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 67/392 (17%), Positives = 122/392 (31%), Gaps = 41/392 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       +++    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 40  FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSKAIVKTLAATGTGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        +N         S++   K        K+ LRI  
Sbjct: 98  VQSLGVPPERIIYANPCKQVSQIKYAANNGVQTMTFDSEVELMKVARAHPKAKLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       R      ++ +    +V G+ FH          F   + +   
Sbjct: 158 DDSKAVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     V+I  EPG 
Sbjct: 218 VFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSDSGVRIIAEPGR 277

Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270
             V +  TL   ++                          +++ +           AHV 
Sbjct: 278 YYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVK 337

Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
             L  +           Y++ + G +C   D   E      + +GD + FE++  Y +  
Sbjct: 338 PLLQKRPKPD----EKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAA 393

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
            + FNG   PTI         + +++F   D+
Sbjct: 394 ASTFNGFQRPTIYYVMSGPAWQLMQQFQNPDF 425


>gi|188990816|ref|YP_001902826.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein
           [Xanthomonas campestris pv. campestris str. B100]
 gi|167732576|emb|CAP50770.1| aspartate kinase / diaminopimelate decarboxylase [Xanthomonas
           campestris pv. campestris]
          Length = 896

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 50/365 (13%), Positives = 113/365 (30%), Gaps = 26/365 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+     +         I      +   A+K  +   +   L Q   G    S  E
Sbjct: 533 GTPRYVYHLPTVRARAQALAQIAAVD--QRYYAIKANSHPAILMALEQAGFGLECVSHGE 590

Query: 63  VMLGHEKFG---GETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           +    +           +  ++    E +A  +   T+  + V  L ++ +      + +
Sbjct: 591 LRRVFDTLPELSPRRVLFTPSFAPRSEYEAAFALGVTVTVDNVEALKRWPEL--FRGRNV 648

Query: 119 GLRINPSVSYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNCENKSF 172
            LRI+           +     S+ G      ++  +   +    + G+  H     ++ 
Sbjct: 649 WLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVELARTLEVTITGVHAHLGSGVETG 708

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-----V 227
             +  M   +          +E I +GGG+             +   +   +        
Sbjct: 709 EHWRMMYDELAGFARRIG-TVETIDIGGGLPIPYSAEDEPFDLELWAKGLAEVKAVHPGF 767

Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----ATIY 282
           ++ +EPG  +V     L       I ++  + V +D+ + + +   L          +  
Sbjct: 768 RLAIEPGRYLVAEAGVLLAQATQVIEKDGVHRVGLDAGMNSLIRPALYDAWHDIENLSQL 827

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPV-KIGDRISFEDVAGYNINRKNWFNGINMPT 341
                 +  V G  C + D+FG+          G+ +   D   Y  +  + +N   +P 
Sbjct: 828 GAPADGSFDVVGPICESSDVFGKRRRLPAATAPGNVMLIADAGAYGYSMASTYNQRELPR 887

Query: 342 IAVKN 346
             V +
Sbjct: 888 EEVID 892


>gi|21232172|ref|NP_638089.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein
           [Xanthomonas campestris pv. campestris str. ATCC 33913]
 gi|66767699|ref|YP_242461.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein
           [Xanthomonas campestris pv. campestris str. 8004]
 gi|21113926|gb|AAM42013.1| bifunctional diaminopimelate decarboxylase/aspartate kinase
           [Xanthomonas campestris pv. campestris str. ATCC 33913]
 gi|66573031|gb|AAY48441.1| diaminopimelate decarboxylase [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 869

 Score =  171 bits (434), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 50/365 (13%), Positives = 113/365 (30%), Gaps = 26/365 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+     +         I      +   A+K  +   +   L Q   G    S  E
Sbjct: 506 GTPRYVYHLPTVRARAQALAQIAAVD--QRYYAIKANSHPAILMALEQAGFGLECVSHGE 563

Query: 63  VMLGHEKFG---GETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           +    +           +  ++    E +A  +   T+  + V  L ++ +      + +
Sbjct: 564 LRRVFDTLPELSPRRVLFTPSFAPRSEYEAAFALGVTVTVDNVEALKRWPEL--FRGRNV 621

Query: 119 GLRINPSVSYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNCENKSF 172
            LRI+           +     S+ G      ++  +   +    + G+  H     ++ 
Sbjct: 622 WLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVELARTLEVTITGVHAHLGSGVETG 681

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-----V 227
             +  M   +          +E I +GGG+             +   +   +        
Sbjct: 682 EHWRMMYDELAGFARRIG-TVETIDIGGGLPIPYSAEDEPFDLELWAKGLAEVKAVHPGF 740

Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----ATIY 282
           ++ +EPG  +V     L       I ++  + V +D+ + + +   L          +  
Sbjct: 741 RLAIEPGRYLVAEAGVLLAQATQVIEKDGVHRVGLDAGMNSLIRPALYDAWHDIENLSQL 800

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPV-KIGDRISFEDVAGYNINRKNWFNGINMPT 341
                 +  V G  C + D+FG+          G+ +   D   Y  +  + +N   +P 
Sbjct: 801 GAPADGSFDVVGPICESSDVFGKRRRLPAATAPGNVMLIADAGAYGYSMASTYNQRELPR 860

Query: 342 IAVKN 346
             V +
Sbjct: 861 EEVID 865


>gi|154509453|ref|ZP_02045095.1| hypothetical protein ACTODO_01984 [Actinomyces odontolyticus ATCC
           17982]
 gi|153799087|gb|EDN81507.1| hypothetical protein ACTODO_01984 [Actinomyces odontolyticus ATCC
           17982]
          Length = 466

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 51/413 (12%), Positives = 114/413 (27%), Gaps = 51/413 (12%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMDG 54
            TP +++D + +                      G     A K F +  +   +     G
Sbjct: 48  GTPTFVLDVEAMRGRARVWASAMAEEFWDGYGMNGGDAFYAGKAFLSADVARLVAAEGLG 107

Query: 55  TTSSSLYEVMLG-HEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKA 111
             ++SL E+ L        +    +   K       A+ +    I  +++ ++++ +  A
Sbjct: 108 IDTASLGELSLALRAGVDPDRIGLHGNNKSDAEIRLALEAGIHRIFIDSMDEVHQIERIA 167

Query: 112 QKLHKKIGLRIN--PSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNG 160
             L     + +     +               + G         E      ++   +  G
Sbjct: 168 ADLGVVAPVMVRLKSGIHAGGNEYIATAHEDQKFGLSLATDQAYEAVAVIKDAAHLDFRG 227

Query: 161 LMFHNNCENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF-- 214
           L  H   +             ++             +  I LGGG+              
Sbjct: 228 LHSHIGSQIFGTEAFAEAARIVIDFAALLKAELGLDVPAIDLGGGVGIAYTGQDPVPTSP 287

Query: 215 -------CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENI------KNL 258
                     ++E    +      + +EPG +I   +  +   V  + +        +  
Sbjct: 288 VEVARALATVVRERCAHHGLPIPHVSVEPGRSIAGPSMVMLYRVGVVKDISLEDGGVRRY 347

Query: 259 VIVDSSVEAHVPDYLLYQESATIYPNTGPY------TAMVCGRSCLAGDIFGEFHFEK-P 311
           V +D  +  ++   L          N  P          + G+ C +GDI          
Sbjct: 348 VAIDGGMSDNIRPVLYDAVYTATLANRDPAQASSLARCRIVGKHCESGDIIIRDIDLPAD 407

Query: 312 VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +  GD ++   V  Y  +  + +N +  P +           IR  + +    
Sbjct: 408 ITGGDLLAVPAVGAYGYSMASNYNMLTKPGVLAVEDGSARWFIRPQTVDHLLA 460


>gi|121534334|ref|ZP_01666158.1| Lysine decarboxylase [Thermosinus carboxydivorans Nor1]
 gi|121307104|gb|EAX48022.1| Lysine decarboxylase [Thermosinus carboxydivorans Nor1]
          Length = 385

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 56/358 (15%), Positives = 101/358 (28%), Gaps = 17/358 (4%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP  ++ + ++  N +         GV +  A+K      + D L         +S  E
Sbjct: 20  GTPLLVLSRDQIRYNYNFLAEHL--PGVHIYYAMKANPDPRIIDELAGLGACFDVASDGE 77

Query: 63  VM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           ++ L       E   Y    K     A         F   S+   +K         + LR
Sbjct: 78  ILALAQMGIAPERIVYANPVKTASGLAAARQTGVRKFTFDSESEIYKMAKAVPGGTVLLR 137

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +     ++   L            +       +  +V GL FH   ++     +   L  
Sbjct: 138 VRVDNPHALVDLNKKFGAHPDEALRLLTIAREQGLDVAGLCFHVGSQSTDAGAYVDALAA 197

Query: 182 IEKEF---GHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYSVQ--IYLEPG 234
             + F         +  + +GGG                 +++    +Y     I+ EPG
Sbjct: 198 CRRIFDAAAKEGFNLRILDIGGGFPIPAIGMKVDAAAMMGQIRTALAQYFPNTEIWAEPG 257

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGPYT 289
             I      L T V+ + +               +    + D+         + +     
Sbjct: 258 RFICGTAVNLITRVIGVQQRNGQQWYFLDEGLYGTFSGIIFDHW--DFELETFKSEPKIP 315

Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
           A   G SC + D+        P+ + D I       Y       FNG     I V   
Sbjct: 316 ATFAGPSCDSLDVLFRDKLTPPLAMDDLILVPSCGSYTSASATVFNGFAKAPIIVWEE 373


>gi|73979739|ref|XP_856678.1| PREDICTED: similar to Ornithine decarboxylase (ODC) isoform 8
           [Canis familiaris]
          Length = 448

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 63/366 (17%), Positives = 117/366 (31%), Gaps = 20/366 (5%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       +++    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 40  FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSRTIVKTLAAIGTGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        SN    +    S++   K        K+ LRI  
Sbjct: 98  VQSLGVPPERIIYANPCKQVSQIKYASNNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++      +V G+ FH          F   + +   
Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERARELNIDVIGVSFHVGSGCTDPETFVQAISDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     V++  EPG 
Sbjct: 218 VFDMGAEVGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPADSGVRVIAEPGR 277

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSS------VEAHVPDYLLYQE--SATIYPNTGP 287
             V +  TL   ++    + +   +   +          + D+   +        P+   
Sbjct: 278 YYVASAFTLAVNIIAKKLSSEQTFMYYVNDGVYGSFNCILYDHAHVKPLLQKRPKPDEKY 337

Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
           Y+  + G +C   D   E      + +GD + FE++  Y +   + FNG   PTI     
Sbjct: 338 YSTSIWGPTCDGLDRIVERCDLPEIHVGDWMLFENMGAYTVAAASTFNGFQRPTIYYVMS 397

Query: 348 DGTIKA 353
             T + 
Sbjct: 398 GPTWQL 403


>gi|301621450|ref|XP_002940066.1| PREDICTED: ornithine decarboxylase-like [Xenopus (Silurana)
           tropicalis]
          Length = 417

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 55/364 (15%), Positives = 113/364 (31%), Gaps = 26/364 (7%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   ++       + +    VK   A+KC +   +   L     G    S+ E+ +
Sbjct: 30  FYVADLGDIIKKY--WQFSKGLPRVKPFYAMKCNSTRAVLQMLAFLGTGFACCSMAELDM 87

Query: 66  G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       +    K        +           +    K  A     ++ L+I  
Sbjct: 88  VLRMGVPAADIVFVNPCKQVSHIRYAAEYGVRKMTFDCESELLKLAASYPQAEMILQIVT 147

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
                   L+     +    E    K +S   +V G+ FH     K    F   +++  K
Sbjct: 148 DNKEPWHTLSGICGVYISECENLLKKAKSLNMDVFGVSFHTGSRCKDTHSFHKAIEDARK 207

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYP-VKDFCQRLKEFSEKYSVQ-----IYLEPGE 235
            F    +   Q+  + +GGG     +  P  + F + ++   ++         I  EPG 
Sbjct: 208 VFDIGKNLGHQMRLLDIGGGFPGDSESRPTFEKFAEVIRISLDQSFPCNEDVQIIAEPGR 267

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA----- 290
             VT+  T    ++      K            + D +              +       
Sbjct: 268 FYVTSAFTAALNIVTKKVVTKKDGEERRQFSYVLNDGIFGSFFLNYMQMEETWPVVGKDF 327

Query: 291 ---------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                    ++ G +C + D   +      +++GD I F ++  Y+++  + FN  + P 
Sbjct: 328 DTAQELFPSILWGPTCASEDKIVKDIDLPELEMGDWIIFPNMGAYSMSMTSNFNAFSTPK 387

Query: 342 IAVK 345
           I   
Sbjct: 388 IYFV 391


>gi|152149219|pdb|2OO0|A Chain A, A Structural Insight Into The Inhibition Of Human And
           Leishmania Donovani Ornithine Decarboxylases By
           3-Aminooxy- 1-Aminopropane
 gi|152149220|pdb|2OO0|B Chain B, A Structural Insight Into The Inhibition Of Human And
           Leishmania Donovani Ornithine Decarboxylases By
           3-Aminooxy- 1-Aminopropane
          Length = 471

 Score =  171 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 67/392 (17%), Positives = 123/392 (31%), Gaps = 41/392 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       +++    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 50  FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSKAIVKTLAATGTGFDCASKTEIQL 107

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        +N    +    S++   K        K+ LRI  
Sbjct: 108 VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 167

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       R      ++ +    +V G+ FH          F   + +   
Sbjct: 168 DDSKAVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARC 227

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     V+I  EPG 
Sbjct: 228 VFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSDSGVRIIAEPGR 287

Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270
             V +  TL   ++                          +++ +           AHV 
Sbjct: 288 YYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVK 347

Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
             L  +           Y++ + G +C   D   E      + +GD + FE++  Y +  
Sbjct: 348 PLLQKRPKPD----EKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAA 403

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
            + FNG   PTI         + +++F   D+
Sbjct: 404 ASTFNGFQRPTIYYVMSGPAWQLMQQFQNPDF 435


>gi|60810097|gb|AAX36104.1| ornithine decarboxylase 1 [synthetic construct]
          Length = 462

 Score =  171 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 67/392 (17%), Positives = 123/392 (31%), Gaps = 41/392 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       +++    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 40  FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSKAIVKTLAATGTGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        +N    +    S++   K        K+ LRI  
Sbjct: 98  VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       R      ++ +    +V G+ FH          F   + +   
Sbjct: 158 DDSKAVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     V+I  EPG 
Sbjct: 218 VFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSDSGVRIIAEPGR 277

Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270
             V +  TL   ++                          +++ +           AHV 
Sbjct: 278 YYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVK 337

Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
             L  +           Y++ + G +C   D   E      + +GD + FE++  Y +  
Sbjct: 338 PLLQKRPKPD----EKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAA 393

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
            + FNG   PTI         + +++F   D+
Sbjct: 394 ASTFNGFQRPTIYYVMSGPAWQLMQQFQNPDF 425


>gi|118374|sp|P27118|DCOR_CHICK RecName: Full=Ornithine decarboxylase; Short=ODC
 gi|63713|emb|CAA45965.1| ornithine decarboxylase [Gallus gallus]
          Length = 450

 Score =  171 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 66/392 (16%), Positives = 119/392 (30%), Gaps = 44/392 (11%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   ++       + +    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 30  FYVADLGDIVK--KHMRWHKALPRVTPFYAVKCNDSEAVVKTLAVLGAGFDCASKTEIQL 87

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        +N    +    S++   K        K+ LRI  
Sbjct: 88  VQSIGVPPERIIYANPCKQLSQIKHAANSGVRMMTFDSEVELMKIARPHPKAKLLLRITT 147

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++ +     + G+ FH          F   + +   
Sbjct: 148 DDSKAVCRLSVKFGATLKTSRLLLERAKELDLAIVGVSFHVGSGCTDPETFVQAISDARC 207

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     V I  EPG 
Sbjct: 208 VFDMGAELGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPLDSEVTIIAEPGR 267

Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270
             V +  TL   ++                          +++ +           AHV 
Sbjct: 268 YYVASAFTLAVNIIAKKIVSKEQTGSDDEDDVNDKTLMYYVNDGVYGSFNCILYDHAHVK 327

Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
             L  +         G Y+  + G +C   D   E      +++GD I FE++  Y +  
Sbjct: 328 PVLQKRPKPD----DGCYSCSIWGPTCDGLDRIVERCNMPELQVGDWILFENMGAYTVAA 383

Query: 331 KNWFNGINMPTIAVKNVDGTIKA---IREFSY 359
            + FNG   PTI         +    I+E  +
Sbjct: 384 ASTFNGFQRPTIHYVMSRPAWQLMQQIKEQEF 415


>gi|4505489|ref|NP_002530.1| ornithine decarboxylase [Homo sapiens]
 gi|118377|sp|P11926|DCOR_HUMAN RecName: Full=Ornithine decarboxylase; Short=ODC
 gi|152149217|pdb|2ON3|A Chain A, A Structural Insight Into The Inhibition Of Human And
           Leishmania Donovani Ornithine Decarboxylases By
           3-Aminooxy- 1-Aminopropane
 gi|152149218|pdb|2ON3|B Chain B, A Structural Insight Into The Inhibition Of Human And
           Leishmania Donovani Ornithine Decarboxylases By
           3-Aminooxy- 1-Aminopropane
 gi|35136|emb|CAA39047.1| ornithine decarboxylase [Homo sapiens]
 gi|189371|gb|AAA59967.1| ornithine decarboxylase [Homo sapiens]
 gi|296667|emb|CAA34353.1| ornithine decarboxylase (ODC) [Homo sapiens]
 gi|338278|gb|AAA60563.1| ornithine decarboxylase [Homo sapiens]
 gi|338280|gb|AAA60564.1| ornithine decarboxylase [Homo sapiens]
 gi|386989|gb|AAA59969.1| ornithine decarboxylase [Homo sapiens]
 gi|19263696|gb|AAH25296.1| Ornithine decarboxylase 1 [Homo sapiens]
 gi|29893806|gb|AAA59966.2| ornithine decarboxylase [Homo sapiens]
 gi|56410853|gb|AAV88093.1| ornithine decarboxylase 1 [Homo sapiens]
 gi|62822486|gb|AAY15034.1| unknown [Homo sapiens]
 gi|119621363|gb|EAX00958.1| ornithine decarboxylase 1, isoform CRA_a [Homo sapiens]
 gi|119621364|gb|EAX00959.1| ornithine decarboxylase 1, isoform CRA_a [Homo sapiens]
 gi|123998958|gb|ABM87068.1| ornithine decarboxylase 1 [synthetic construct]
 gi|157929112|gb|ABW03841.1| ornithine decarboxylase 1 [synthetic construct]
 gi|158258136|dbj|BAF85041.1| unnamed protein product [Homo sapiens]
 gi|189053466|dbj|BAG35632.1| unnamed protein product [Homo sapiens]
 gi|190690881|gb|ACE87215.1| ornithine decarboxylase 1 protein [synthetic construct]
          Length = 461

 Score =  171 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 67/392 (17%), Positives = 123/392 (31%), Gaps = 41/392 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       +++    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 40  FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSKAIVKTLAATGTGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        +N    +    S++   K        K+ LRI  
Sbjct: 98  VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       R      ++ +    +V G+ FH          F   + +   
Sbjct: 158 DDSKAVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     V+I  EPG 
Sbjct: 218 VFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSDSGVRIIAEPGR 277

Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270
             V +  TL   ++                          +++ +           AHV 
Sbjct: 278 YYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVK 337

Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
             L  +           Y++ + G +C   D   E      + +GD + FE++  Y +  
Sbjct: 338 PLLQKRPKPD----EKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAA 393

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
            + FNG   PTI         + +++F   D+
Sbjct: 394 ASTFNGFQRPTIYYVMSGPAWQLMQQFQNPDF 425


>gi|294626294|ref|ZP_06704897.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
 gi|292599440|gb|EFF43574.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
          Length = 869

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 54/365 (14%), Positives = 112/365 (30%), Gaps = 26/365 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y      +         I      +   A+K  A   +   L Q   G    S  E
Sbjct: 506 GTPRYAYHLPTVRERAHALAQIAAVD--QRYYAIKANAHPAILMALEQAGFGLECVSHGE 563

Query: 63  VMLGHEKFG---GETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           +    +           +  ++    E +A  +   T+  + V  L  + +      + +
Sbjct: 564 LRRVFQALPELSPRRVLFTPSFAPKAEYEAAFALGVTVTVDNVEALRNWPEV--FRGRNV 621

Query: 119 GLRINPSVSYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNCENKSF 172
            LRI+           +     S+ G      ++  D   +    + G+  H     ++ 
Sbjct: 622 WLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVDVARTLDLTITGVHAHLGSGVETG 681

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-----V 227
             +  M   +          +E I +GGG+             +   +   +        
Sbjct: 682 EHWRMMYDELAGFARRIG-TVETIDIGGGLPIPYSAEDEPFDLEVWAKGLAEVKAVHPGY 740

Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----ATIY 282
           ++ +EPG  +V     L  +V   I ++  + V +D+ +   +   L          +  
Sbjct: 741 RLAIEPGRYLVAEAGVLLASVTQVIEKDGVHRVGLDAGMNTLIRPALYDAWHDIENLSQL 800

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKI-GDRISFEDVAGYNINRKNWFNGINMPT 341
                 T  + G  C + D+FG+        + GD +   D   Y     + +N   +P 
Sbjct: 801 DAPADGTFDIVGPICESSDVFGKRRRLPAATVPGDVVLVADAGAYGYTMASTYNQRELPR 860

Query: 342 IAVKN 346
             V +
Sbjct: 861 EEVID 865


>gi|71278455|ref|YP_269580.1| Orn/DAP/Arg decarboxylase family protein [Colwellia psychrerythraea
           34H]
 gi|71144195|gb|AAZ24668.1| Orn/DAP/Arg decarboxylase, family 2 [Colwellia psychrerythraea 34H]
          Length = 461

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 62/399 (15%), Positives = 123/399 (30%), Gaps = 38/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P Y++ +Q+L  +         +  VK  +  ++K      +   L Q        S 
Sbjct: 49  GSPLYVVSEQRLRQDFKNFKRSFSDEHVKTKVAYSIKTNYLPAVCAILRQEGAQAEVVSG 108

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKI 118
            E  L       G+   +N  +K      +  +    +  +  ++L      +++L    
Sbjct: 109 MEYELARTLGIPGKDIIFNGPHKTQSELKLALSEGALVNIDNFNELEHIDRISEELITPA 168

Query: 119 G--LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
              +R+N     + +     N          K    ++     G   H          ++
Sbjct: 169 RVAIRVNFRYGTNPWTKFGFNNENGESLNALKKIARNKKLQFEGFHCHVGTFVLVHELYA 228

Query: 177 AMLKNI---EKEFGHFITQIEWISLGGGIH---FTDKDYPVK------------DFCQRL 218
             ++ +    K+          I +GGG         +Y +              + + +
Sbjct: 229 NAVEKLIELAKQAREIGLNPTSIDIGGGFPSANTLRPEYDLPGGSQRANNDYLLPYAEHI 288

Query: 219 KEFSEKY------SVQIYLEPGEAIVTNTTTLNTTVLDISENIK-NLVIVDSSVEAHVPD 271
                K+      +  + LEPG AIV  +T L +TV+   E +     ++  +    VP 
Sbjct: 289 FGQLRKHSELFGNNPTLILEPGRAIVDASTQLLSTVIAKKEIVGGRNAVIIDAGVNLVPT 348

Query: 272 YLLYQESATIYPNTGPY------TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              Y         T            + G  C+  D   E      + +GD +S  +V  
Sbjct: 349 VCYYNHQIKTVAATKSEERGLLKPVDIFGPLCMQSDRLREQILMPALNVGDHLSIGNVGA 408

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           Y   + N F     P   +    G     R  +Y D + 
Sbjct: 409 YCHTQSNQFI-QPRPATILLGEHGPELIRRAETYKDIFA 446


>gi|209966274|ref|YP_002299189.1| lysine [Rhodospirillum centenum SW]
 gi|209959740|gb|ACJ00377.1| lysine [Rhodospirillum centenum SW]
          Length = 376

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 50/358 (13%), Positives = 108/358 (30%), Gaps = 29/358 (8%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP  ++D   +  N D           K+  A+K   A  +   L        ++S+ E+
Sbjct: 16  TPCLVVDLDVVARNYDRLSGAL--PDAKIYYAVKANPAPEILRLLTGLGSSFDTASVPEI 73

Query: 64  MLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
                     +  +Y            A         F++ ++L K    A        +
Sbjct: 74  EDCLAAGATPDRISYGNTIKKAADIRRAYELGVRLFAFDSEAELEKIAANAPGSRVFCRI 133

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS---A 177
             +   +           P        +      +    G+ FH   + +    +    +
Sbjct: 134 LTSGEGADWPLSRKFGCDPEMARDLLLRAAALDVVP--YGVSFHVGSQQRDLAQWDAALS 191

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFC--QRLKEFSEKYSVQIYL 231
               I ++       +  +++GGG                F   + L+        +  +
Sbjct: 192 TTAAIFRDLEEKGVALRMVNMGGGFPTRYRTDVPGTDEYGFAIDEALRRHFGNRIPETIV 251

Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYP 283
           EPG  +V +   + + V+ IS    N +     ++          + + + Y    T   
Sbjct: 252 EPGRGMVGDAGIIQSEVVLISRKSANDLRRWVYLDIGKFGGLAETMDEAIQYP-IETERD 310

Query: 284 NTGPYTAMVCGRSCLAGDIF---GEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337
                  ++ G +C + D+     E+     ++IGDR++      Y  +     FNG 
Sbjct: 311 GGPAEPVILAGPTCDSADVLYERAEYRLPVDLRIGDRVAIRATGAYTTSYSAVNFNGF 368


>gi|301621448|ref|XP_002940065.1| PREDICTED: ornithine decarboxylase-like [Xenopus (Silurana)
           tropicalis]
          Length = 430

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 65/376 (17%), Positives = 129/376 (34%), Gaps = 36/376 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +        ++++   VK   A+KC +   +   L     G   +S+ E+ +
Sbjct: 59  FYVADLGDIKQ--KHWRFMKELPRVKPFYAVKCNSTNEVLQMLATLGTGFDCASMGEIDM 116

Query: 66  G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       Y    K        +           +   FK  A     ++ LRI  
Sbjct: 117 VLRMGVPAADIVYANPCKQVSHIKYAAAHGVCKMTFDCEAELFKIAAFHPKAEMILRIAT 176

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIE---SEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
                       +  +  L E+C+D ++   +    V G+ FH     K+   F   +++
Sbjct: 177 DDR---DAWCALSSKYGALVEQCEDLLKTAKNLNIQVIGVSFHTGSGCKNTHSFCKAIED 233

Query: 182 IEKEFG---HFITQIEWISLGGGI-HFTDKDYPVKDFCQRLKEFSEKYSVQ-----IYLE 232
             K F        Q+  + +GGG    ++     ++F   +++   +Y        I  E
Sbjct: 234 ARKVFEIGKKLGYQMRLLDIGGGFSGNSEFRPTFEEFADVIRQSLNQYFPNNKEVEIISE 293

Query: 233 PGEAIVTNTTTLNTTVL----------DISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
           PG   V +  T+   ++          D +   K   I++  V     D+ L +E   + 
Sbjct: 294 PGRYYVESAFTVALNIITKKEVYEKGADGNSRRKFSYILNDGVYGTFLDFYLVKEKQKLK 353

Query: 283 PNTGP--------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
           P  G         + + + G +C   D      +   ++ GD + F ++  Y+I+    F
Sbjct: 354 PLLGKDFATEQELFPSNLWGPTCTNVDKLVNEFYLPELETGDWVIFPNMGAYSISMSTTF 413

Query: 335 NGINMPTIAVKNVDGT 350
           NG   P +      G 
Sbjct: 414 NGFPQPKVYFVLSKGD 429


>gi|254562604|ref|YP_003069699.1| ornithine/diaminopimelate PLP-dependent decarboxylase
           [Methylobacterium extorquens DM4]
 gi|254269882|emb|CAX25860.1| putative ornithine/diaminopimelate PLP-dependent decarboxylase
           [Methylobacterium extorquens DM4]
          Length = 429

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 47/390 (12%), Positives = 98/390 (25%), Gaps = 37/390 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   +                ++  ++K      +    +Q   G   +S  E
Sbjct: 39  GTPLFVYDADTMRRTYRALCAALAGF-AEVDFSVKANPNPAVIRVFSQEGAGAEIASGAE 97

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
                      E   +    K       +       I      ++ +    A++   ++ 
Sbjct: 98  FDAAIRAGVPPEKILFAGPGKGAADLDRVIGGGIGEIHLENREEIVRVAAAAERHGVRVR 157

Query: 120 LRINPSVSYSKFIL-ADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKS 171
           + +  +   +            S  G   +D   +           + GL      +   
Sbjct: 158 VALRINPGATAQGGAMRMGGKPSPFGFDEEDIEAAIDIVEAAPRLRLVGLHLFAGTQGLK 217

Query: 172 FL----CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV-----------KDFCQ 216
                  +S  L    +        +E I LGGG+                     D   
Sbjct: 218 ADTLLGQWSYGLGLAARIANRIGRPLETIDLGGGLGIPYFSGDTALDLGAIRAGLPDLIA 277

Query: 217 RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY---- 272
            L+   +  S ++ LEPG  +          VL + E+  +  ++      H        
Sbjct: 278 TLRADPKLASARVVLEPGRYLTGPAGVYVARVLAVKESRGSRFVITDGGMHHHLAASGNL 337

Query: 273 -----LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
                  +  +A            V G  C   D+        P+  GD ++      Y 
Sbjct: 338 GQIVKRDFPLAAVTDLGGERAATAVVGPLCTPLDMLARAAPLPPLAEGDLVAVLQSGAYG 397

Query: 328 INRK-NWFNGINMPTIAVKNVDGTIKAIRE 356
           +      F     P   + +     +    
Sbjct: 398 LTASPTGFLSHPTPAEVLVDGGEAREIRAR 427


>gi|294666660|ref|ZP_06731897.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
 gi|292603566|gb|EFF46980.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein
           [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
          Length = 869

 Score =  170 bits (430), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 54/365 (14%), Positives = 112/365 (30%), Gaps = 26/365 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y      +         I      +   A+K  A   +   L Q   G    S  E
Sbjct: 506 GTPRYTYHLPTVRERAHALAQIAAVD--QRYYAIKANAHPAILMALEQAGFGLECVSHGE 563

Query: 63  VMLGHEKFG---GETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           +    +           +  ++    E +A  +   T+  + V  L  + +      + +
Sbjct: 564 LRRVFQALPELSPRRVLFTPSFAPKAEYEAAFALGVTVTVDNVEALRNWPEV--FRGRNV 621

Query: 119 GLRINPSVSYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNCENKSF 172
            LRI+           +     S+ G      ++  D   +    + G+  H     ++ 
Sbjct: 622 WLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVDVARTLDLTITGVHAHLGSGVETG 681

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-----V 227
             +  M   +          +E I +GGG+             +   +   +        
Sbjct: 682 EHWRMMYDELAGFARRIG-TVETIDIGGGLPIPYSAEDEPFDLEVWAKGLAEVKAVHPGY 740

Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----ATIY 282
           ++ +EPG  +V     L  +V   I ++  + V +D+ +   +   L          +  
Sbjct: 741 RLAIEPGRYLVAEAGVLLASVTQVIEKDGVHRVGLDAGMNTLIRPALYDAWHDIENLSQL 800

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKI-GDRISFEDVAGYNINRKNWFNGINMPT 341
                 T  + G  C + D+FG+        + GD +   D   Y     + +N   +P 
Sbjct: 801 DAPADGTFDIVGPICESSDVFGKRRRLPAATVPGDVVLVADAGAYGYTMASTYNQRELPR 860

Query: 342 IAVKN 346
             V +
Sbjct: 861 EEVID 865


>gi|283850744|ref|ZP_06368031.1| Orn/DAP/Arg decarboxylase 2 [Desulfovibrio sp. FW1012B]
 gi|283573987|gb|EFC21960.1| Orn/DAP/Arg decarboxylase 2 [Desulfovibrio sp. FW1012B]
          Length = 420

 Score =  170 bits (430), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 53/393 (13%), Positives = 109/393 (27%), Gaps = 32/393 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            T   + D  +L   +               +A+K      +   L     G  ++SL E
Sbjct: 17  DTAVVVYDLDRLEAGVAELAAAF-GPQTLAAVAVKANPLPPVLAFLWGLGAGAEAASLPE 75

Query: 63  VMLGHE-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI-- 118
           + L            + + A    E+   L+    +  + + ++ +    A  L +    
Sbjct: 76  LHLALAAGVPAGRIVFDSPAKTADELRLALTLGVWVNADNLEEVARLDTLAASLGRPPEA 135

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD-----KIESEIKNVNGLMFHNNCENKSFL 173
           GLR+NP V   +         +S+ G   +         +    + GL  H   +     
Sbjct: 136 GLRVNPQVGLGRIKATSVAGRYSKFGVPLEKRREIKAAFARHPWLTGLHVHVGSQGCPLD 195

Query: 174 CFSA----MLKNIEKEFGHFIT-QIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
              A    +     +        ++  + +GGG+  T ++                    
Sbjct: 196 LLVAGVGAVYDLALEIDREQGPGRVRRLDIGGGLPATYRENDSPPTPAAYAAALATRCPG 255

Query: 229 IY-------LEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL---YQE 277
           I+        E G  +        + V  +     +   V     +  V +      +  
Sbjct: 256 IFSGDRELVTEFGRWLHAPAAVAISRVEYVKRQRGHRTAVLHLGADMFVRECYNPKSWSH 315

Query: 278 SATIYPNTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
              +    G           + G  C +GD          +  GD +   DV  Y ++  
Sbjct: 316 RVAVLTADGLEKTGEKSAWHLAGPLCFSGDFPVWRVRLPDIDEGDLLVIRDVGAYTLSMW 375

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           + +N   MP +               S +D   
Sbjct: 376 SRYNSRQMPRVLAVRDGRFSVLRERESPDDVVR 408


>gi|240169895|ref|ZP_04748554.1| LysA_1 [Mycobacterium kansasii ATCC 12478]
          Length = 446

 Score =  170 bits (430), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 53/397 (13%), Positives = 121/397 (30%), Gaps = 37/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ID+    +       + +   V+++ A K      +     +   G    S  E
Sbjct: 50  GTPAYVIDETDFRHRARRYRAVLR--DVEVVYAGKSLLTTAVARWAREEGLGIGVCSPGE 107

Query: 63  VMLGHEK-FGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + +             +      D   DAV      ++ ++   +      A +  +++ 
Sbjct: 108 LAVALAGGVDPSRMVMHGNATSPDELRDAVAVGVGRLVLDSSLGIAYLAGLA-RWRQRVL 166

Query: 120 LRINPSVSYSKFI-----LADPNRPFSRLGEKCKDKIESEIKN----VNGLMFHNNCENK 170
           +R+ P V           ++DP   F+  G    D + + + +    + GL      +  
Sbjct: 167 IRVTPDVDVHGHRAVTTGISDPTCGFTLTGGHAADAVRAVLAHPILDLIGLHCQLGPQVS 226

Query: 171 SFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFS 222
               +      ++  +     H    +  +++GGG          +  + +    +++  
Sbjct: 227 DPARYGEAIRRLIAAMADIRAHHGVILTELNIGGGHAVPYLRGDPELDLAELAGVIEDAL 286

Query: 223 EKYSVQIYL-------EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYL 273
           ++     +        EPG AI          V  +        +V        +    L
Sbjct: 287 DEACAAEHFPRPAVVVEPGRAISARAGVTLYRVCSVKTRPNGHTVVAVDGGRSDNPRVAL 346

Query: 274 LYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNI 328
              +      N        +  V GR C AGD           +  GD ++      Y+ 
Sbjct: 347 DGAQYTVALANRHGLGVKRSVTVAGRHCGAGDEIARNVELPSDIHAGDLLAVACTGSYHH 406

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           +  + +  +  P +   N     + +R  +  D  + 
Sbjct: 407 SMASNYTMVGRPPLVAVNGGRARELVRRETIADLLSR 443


>gi|84622974|ref|YP_450346.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein
           [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|84366914|dbj|BAE68072.1| bifunctional diaminopimelate decarboxylase/aspartase [Xanthomonas
           oryzae pv. oryzae MAFF 311018]
          Length = 869

 Score =  170 bits (430), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 56/365 (15%), Positives = 109/365 (29%), Gaps = 26/365 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y      +         +      +   A+K  A   +   L Q   G    S  E
Sbjct: 506 GTPRYAYHLPTVRARAHALAQVAAVD--QRYYAIKANAHPAILMALEQAGFGLECVSHGE 563

Query: 63  VMLGHEKFG---GETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           V    +           +  ++    E  A  +   T+  + V  L  + +      + I
Sbjct: 564 VRRVFQALPELSPRRVLFTPSFAPKAEYAAAFALGVTVTVDNVEALRNWPEV--FRGRNI 621

Query: 119 GLRINPSVSYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNCENKSF 172
            LRI+           +     S+ G      ++  D   +    + G+  H     ++ 
Sbjct: 622 WLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVDVARTLEVTITGVHAHLGSGVETG 681

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-----V 227
             +  M   +          +E I +GGG+                 +   +        
Sbjct: 682 EHWRMMYDELAGFARRIG-TVETIDIGGGLPIPYSAEDEPFDLDVWAKGLAEVKAVHPGY 740

Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----ATIY 282
           ++ +EPG  +V     L  +V   I ++    V +D+ +   +   L          +  
Sbjct: 741 RLAIEPGRYLVAEAGVLLASVTQVIEKDGVQRVGLDAGMNTLIRPALYDAWHDIENLSQL 800

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK-IGDRISFEDVAGYNINRKNWFNGINMPT 341
                 T  V G  C + D+FG+          GD +   D   Y  +  + +N   +P 
Sbjct: 801 DAPADSTFDVVGPICESSDVFGKRRRLPAATMPGDVVLVADTGAYGYSMASTYNQRELPR 860

Query: 342 IAVKN 346
             V +
Sbjct: 861 EEVID 865


>gi|332247288|ref|XP_003272785.1| PREDICTED: ornithine decarboxylase isoform 1 [Nomascus leucogenys]
 gi|332247290|ref|XP_003272786.1| PREDICTED: ornithine decarboxylase isoform 2 [Nomascus leucogenys]
          Length = 461

 Score =  170 bits (430), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 67/392 (17%), Positives = 123/392 (31%), Gaps = 41/392 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       +++    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 40  FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSKAIVKTLAAIGTGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        +N    +    S++   K        K+ LRI  
Sbjct: 98  VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       R      ++ +    +V G+ FH          F   + +   
Sbjct: 158 DDSKAVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     V+I  EPG 
Sbjct: 218 VFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSDSGVRIIAEPGR 277

Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270
             V +  TL   ++                          +++ +           AHV 
Sbjct: 278 YYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVK 337

Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
             L  +           Y++ + G +C   D   E      + +GD + FE++  Y +  
Sbjct: 338 PLLQKRPKPD----EKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAA 393

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
            + FNG   PTI         + +++F   D+
Sbjct: 394 ASTFNGFQRPTIYYVMSGPAWQLMQQFQNPDF 425


>gi|21243638|ref|NP_643220.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein
           [Xanthomonas axonopodis pv. citri str. 306]
 gi|21109214|gb|AAM37756.1| bifunctional diaminopimelate decarboxylase/asparta [Xanthomonas
           axonopodis pv. citri str. 306]
          Length = 869

 Score =  170 bits (430), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 53/365 (14%), Positives = 112/365 (30%), Gaps = 26/365 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y      +         I      +   A+K  A   +   L Q   G    S  E
Sbjct: 506 GTPRYAYHLPTVRERAHALAQIAAVD--QRYYAIKANAHPAILMALEQAGFGLECVSHGE 563

Query: 63  VMLGHEKFG---GETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           +    +           +  ++    E +A  +   T+  + V  L  + +      + +
Sbjct: 564 LRRVFQALPELSPRRVLFTPSFAPKAEYEAAFALGVTVTVDNVEALRNWPEV--FRGRNV 621

Query: 119 GLRINPSVSYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNCENKSF 172
            LRI+           +     S+ G      ++  +   +    + G+  H     ++ 
Sbjct: 622 WLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVEVARTLEVTITGVHAHLGSGVETG 681

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-----V 227
             +  M   +          +E I +GGG+             +   +   +        
Sbjct: 682 EHWRMMYDELAGFARRIG-TVETIDIGGGLPIPYSAEDEPFDLEVWAKGLAEVKAVHPGY 740

Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----ATIY 282
           ++ +EPG  +V     L  +V   I ++  + V +D+ +   +   L          +  
Sbjct: 741 RLAIEPGRYLVAEAGVLLASVTQVIEKDGVHRVGLDAGMNTLIRPALYDAGHDIENLSQL 800

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPV-KIGDRISFEDVAGYNINRKNWFNGINMPT 341
                 T  + G  C + D+FG+          GD +   D   Y  +  + +N   +P 
Sbjct: 801 DAPADGTFDIVGPICESSDVFGKRRRLPAATAPGDVVLVADAGAYGYSMASTYNQRELPR 860

Query: 342 IAVKN 346
             V +
Sbjct: 861 EEVID 865


>gi|300676948|gb|ADK26819.1| ornithine decarboxylase 1 [Zonotrichia albicollis]
          Length = 460

 Score =  170 bits (430), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 63/392 (16%), Positives = 118/392 (30%), Gaps = 44/392 (11%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   ++       + +    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 40  FYVADLGDIVK--KHMRWHKALPRVTPFYAVKCNDSKAVVKTLAVLGAGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        ++    +    S++   K        K+ LRI  
Sbjct: 98  VQSIGVPPERIIYANPCKQVSQIKHAASSGVQMMTFDSEVELMKVARAHPKAKLVLRITT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++ +     + G+ FH          F   + +   
Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELDLAIVGVSFHVGSGCTDPETFVQAISDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     + I  EPG 
Sbjct: 218 VFDMGAELGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPSDSGINIIAEPGR 277

Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270
             V +  TL   ++                          +++ +           AHV 
Sbjct: 278 YYVASAFTLAVNIIAKKIVLKEQTGSDDEDDTNDKTLMYYVNDGVYGSFNCILYDHAHVK 337

Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
             L  +           Y+  + G +C   D   E      +++GD I FE++  Y +  
Sbjct: 338 PVLQKRPKPDDSC----YSCSIWGPTCDGLDRIVERFNMPELQVGDWILFENMGAYTVAA 393

Query: 331 KNWFNGINMPTIAVKNVDGTIKA---IREFSY 359
            + FNG   PTI         +    I+E  +
Sbjct: 394 ASTFNGFQRPTIHYVMSRPAWQLMQQIKEQGF 425


>gi|294055339|ref|YP_003548997.1| Diaminopimelate decarboxylase [Coraliomargarita akajimensis DSM
           45221]
 gi|293614672|gb|ADE54827.1| Diaminopimelate decarboxylase [Coraliomargarita akajimensis DSM
           45221]
          Length = 421

 Score =  170 bits (430), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 56/386 (14%), Positives = 121/386 (31%), Gaps = 34/386 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+ D   L  N    L      G+    A+K      +    N+      +SS YE
Sbjct: 23  GSPVYVYDMATLKANAADVLAFPNAYGLTARYAMKASPNAAILRIFNEAGLHIDASSGYE 82

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           V       +  E  + +      +   +      I   ++SQL +F        + IG+R
Sbjct: 83  VRRAIAAGYTPEKISLSTQELPTDFAELYELGIEINACSLSQLERFGQA--FPGRSIGVR 140

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVNGLMFHNNCENKSFLCFSA 177
            NP          +   P S  G   +   +        ++  +  H +  + S      
Sbjct: 141 FNPGAGSGGNNRTNVGGPASSFGIWHEWIDQVQEIVARYDLKVIRIHTHIGSGSDPKVWQ 200

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEKY------SV 227
            + ++  E       +  ++LGGG             ++   + + +   ++       +
Sbjct: 201 KISSMSLELVRQFPDVVSLNLGGGYKVARMADEVSTDLQQCGEPVADKFREFAAETGREI 260

Query: 228 QIYLEPGEAIVTNTTTLNTTVLD---ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
           ++ +EPG  ++ N  ++ + V D           + +++ +   +   +   +       
Sbjct: 261 RLEIEPGTYLLANACSVLSMVQDKVSTGREGYEFLKLNTGMTEVLRPSIYGAQHPIFILK 320

Query: 285 TGPYT----AMVCGRSCLAGDIFGEFHFEKPV---------KIGDRISFEDVAGYNINRK 331
               T     M+ G  C +GDI      +  +         +IGD    +    Y     
Sbjct: 321 EATPTETCDYMIAGHCCESGDILTPASGDPELLATRTLPVTEIGDLCVIDGSGAYCSAMS 380

Query: 332 N-WFNGINMPTIAVKNVDGTIKAIRE 356
              +N        + +       IR+
Sbjct: 381 TKNYNSYPEAAEVMLDEANRPHLIRK 406


>gi|149640409|ref|XP_001508616.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
          Length = 533

 Score =  169 bits (429), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 58/361 (16%), Positives = 113/361 (31%), Gaps = 25/361 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+ + D  +L+      L      GV    ++KC  +  +   L     G   +S  E+ 
Sbjct: 106 PFLVADLGELVRKHQAFLQAL--PGVMPFYSVKCNNSPWVLQILKSLGTGFDCASQAELE 163

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                        Y    K        ++    +    S+    K        ++ LRI 
Sbjct: 164 QVLGLGVPATRIIYANPCKQTSHIQYAASQGVQLMTFDSEGELTKVAKFHPGARMVLRIR 223

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S S   L+           +      +    V G+ FH     +    +   + +  
Sbjct: 224 TEDSKSLHPLSTKFGASLEQSRRLLAVARNLNIAVIGVCFHVGSACQRVQNYEEAIADAH 283

Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQ------RLKEFSEKYSVQIYLEPG 234
           + F        ++ ++ +GGG   T+   P  +             F E    +I  EPG
Sbjct: 284 RVFEMGRQEGHEMHFLDIGGGFPGTESFVPTFEEMAEGIRTALAHYFPEGCGTEIIAEPG 343

Query: 235 EAIVTNTTTLNTTVLDI-----------SENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
               T+       ++                  N         + + D  L       + 
Sbjct: 344 RYYATSVYVSALNIIAKKATVEKGGCRKMMYYLNDGCYGLFQMSSMEDPKLKPVVMKTFS 403

Query: 284 NTGP-YTAMVCGRSCLAGDIFG-EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
           +  P Y  ++ G +C A D    E      +++GD + F+++  Y++   + FNG  MP+
Sbjct: 404 SEPPLYPCILWGPTCDAMDKISQEDILLPELEVGDWLVFKNMGSYSLTMFSSFNGFPMPS 463

Query: 342 I 342
           +
Sbjct: 464 V 464


>gi|300676855|gb|ADK26730.1| ornithine decarboxylase 1 [Zonotrichia albicollis]
          Length = 460

 Score =  169 bits (429), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 63/392 (16%), Positives = 118/392 (30%), Gaps = 44/392 (11%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   ++       + +    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 40  FYVADLGDIVK--KHMRWHKALPRVTPFYAVKCNDSKAVVKTLAVLGAGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        ++    +    S++   K        K+ LRI  
Sbjct: 98  VQSIGVPPERIIYANPCKQVSQIKHAASSGVQMMTFDSEVELMKVARAHPKAKLVLRITT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++ +     + G+ FH          F   + +   
Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELDLAIVGVSFHVGSGCTDPETFVQAISDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     + I  EPG 
Sbjct: 218 VFDMAAELGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPSDSGINIIAEPGR 277

Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270
             V +  TL   ++                          +++ +           AHV 
Sbjct: 278 YYVASAFTLAVNIIAKKIVLKEQTGSDDEDDANDKTLMYYVNDGVYGSFNCILYDHAHVK 337

Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
             L  +           Y+  + G +C   D   E      +++GD I FE++  Y +  
Sbjct: 338 PVLQKRPKPDDSC----YSCSIWGPTCDGLDRIVERFNMPELQVGDWILFENMGAYTVAA 393

Query: 331 KNWFNGINMPTIAVKNVDGTIKA---IREFSY 359
            + FNG   PTI         +    I+E  +
Sbjct: 394 ASTFNGFQRPTIHYVMSRPAWQLMQQIKEQGF 425


>gi|297668211|ref|XP_002812342.1| PREDICTED: ornithine decarboxylase-like [Pongo abelii]
          Length = 461

 Score =  169 bits (429), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 68/393 (17%), Positives = 122/393 (31%), Gaps = 43/393 (10%)

Query: 6   YYLIDK-QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           +Y+ D    L  +L     +     V    A+KC  +  +  TL     G   +S  E+ 
Sbjct: 40  FYVADLGDILKKHLRWLKAV---PRVTPFYAVKCNDSKAIVKTLAAVGTGFDCASKTEIQ 96

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           L        E   Y    K        +N    +    S++   K        K+ LRI 
Sbjct: 97  LVQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIA 156

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S +   L+       R      ++ +    +V G+ FH          F   + +  
Sbjct: 157 TDDSKAVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDAR 216

Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPG 234
             F         +  + +GGG   ++      +           K F     V+I  EPG
Sbjct: 217 CVFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPSDSGVRIIAEPG 276

Query: 235 EAIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHV 269
              V +  TL   ++                          +++ +           AHV
Sbjct: 277 RYYVASAFTLAVNIIAKKMVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHV 336

Query: 270 PDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
              L  +           Y++ + G +C   D   E      + +GD + FE++  Y + 
Sbjct: 337 KPLLQKRPKPD----EKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVA 392

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
             + FNG   PTI         + +++F   D+
Sbjct: 393 AASTFNGFQRPTIYYVMSGPAWQLMQQFQNPDF 425


>gi|281348976|gb|EFB24560.1| hypothetical protein PANDA_010453 [Ailuropoda melanoleuca]
          Length = 427

 Score =  169 bits (429), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 66/386 (17%), Positives = 119/386 (30%), Gaps = 41/386 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       +++    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 6   FYVADLGDILK--KHLRWLKALPRVSPFYAVKCNDSRTIVKTLATIGTGFDCASKTEIQL 63

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        +N    +    S++   K        K+ LRI  
Sbjct: 64  VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 123

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++      +V G+ FH          F   + +   
Sbjct: 124 DDSKAVCRLSVKFGATLKTSRLLLERARELNIDVIGVSFHVGSGCTDPETFVQAISDARC 183

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F     F   +  + +GGG   ++      +           K F     V+I  EPG 
Sbjct: 184 VFDMGAEFGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPADSGVRIIAEPGR 243

Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270
             V +  TL   ++                          +++ +           AHV 
Sbjct: 244 YYVASAFTLAVNIIAKKLVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVK 303

Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
             L  +           Y+  + G +C   D   E      + +GD + FE++  Y +  
Sbjct: 304 PLLQKRPKPD----EKYYSTSIWGPTCDGLDRIVERCDLPEMHVGDWMVFENMGAYTVAA 359

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIRE 356
            + FNG   PTI       T +  ++
Sbjct: 360 ASTFNGFQRPTIYYVMSGPTWQLRQQ 385


>gi|268370110|ref|NP_001161238.1| ornithine decarboxylase [Gallus gallus]
          Length = 464

 Score =  169 bits (429), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 66/392 (16%), Positives = 119/392 (30%), Gaps = 44/392 (11%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   ++       + +    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 44  FYVADLGDIVK--KHMRWHKALPRVTPFYAVKCNDSEAVVKTLAVLGAGFDCASKTEIQL 101

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        +N    +    S++   K        K+ LRI  
Sbjct: 102 VQSIGVPPERIIYANPCKQLSQIKHAANSGVRMMTFDSEVELMKIARAHPKAKLVLRITT 161

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++ +     + G+ FH          F   + +   
Sbjct: 162 DDSKAVCRLSVKFGATLKTSRLLLERAKELDLAIVGVSFHVGSGCTDPETFVQAISDARC 221

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     V I  EPG 
Sbjct: 222 VFDMGAELGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPLDSEVTIIAEPGR 281

Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270
             V +  TL   ++                          +++ +           AHV 
Sbjct: 282 YYVASAFTLAVNIIAKKIVSKEQTGSDDEDDVNDKTLMYYVNDGVYGSFNCILYDHAHVK 341

Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
             L  +         G Y+  + G +C   D   E      +++GD I FE++  Y +  
Sbjct: 342 PVLQKRPKPD----DGCYSCSIWGPTCDGLDRIVERCNMPELQVGDWILFENMGAYTVAA 397

Query: 331 KNWFNGINMPTIAVKNVDGTIKA---IREFSY 359
            + FNG   PTI         +    I+E  +
Sbjct: 398 ASTFNGFQRPTIHYVMSRPAWQLMQQIKEQEF 429


>gi|301772282|ref|XP_002921559.1| PREDICTED: ornithine decarboxylase-like [Ailuropoda melanoleuca]
          Length = 461

 Score =  169 bits (429), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 66/386 (17%), Positives = 119/386 (30%), Gaps = 41/386 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       +++    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 40  FYVADLGDILK--KHLRWLKALPRVSPFYAVKCNDSRTIVKTLATIGTGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        +N    +    S++   K        K+ LRI  
Sbjct: 98  VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++      +V G+ FH          F   + +   
Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERARELNIDVIGVSFHVGSGCTDPETFVQAISDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F     F   +  + +GGG   ++      +           K F     V+I  EPG 
Sbjct: 218 VFDMGAEFGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPADSGVRIIAEPGR 277

Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270
             V +  TL   ++                          +++ +           AHV 
Sbjct: 278 YYVASAFTLAVNIIAKKLVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVK 337

Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
             L  +           Y+  + G +C   D   E      + +GD + FE++  Y +  
Sbjct: 338 PLLQKRPKPD----EKYYSTSIWGPTCDGLDRIVERCDLPEMHVGDWMVFENMGAYTVAA 393

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIRE 356
            + FNG   PTI       T +  ++
Sbjct: 394 ASTFNGFQRPTIYYVMSGPTWQLRQQ 419


>gi|325925946|ref|ZP_08187313.1| diaminopimelate decarboxylase ;aspartate kinase [Xanthomonas
           perforans 91-118]
 gi|325543611|gb|EGD15027.1| diaminopimelate decarboxylase ;aspartate kinase [Xanthomonas
           perforans 91-118]
          Length = 827

 Score =  169 bits (429), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 54/365 (14%), Positives = 110/365 (30%), Gaps = 26/365 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y      +         I      +   A+K  A   +   L Q   G    S  E
Sbjct: 464 GTPRYAYHLPTVRARAHALAQIAAVD--QRYYAIKANAHPAILMALEQAGFGLECVSQGE 521

Query: 63  VMLGHEKFG---GETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           +    +           +  ++    E +A  +   T+  + V  L  + +      + I
Sbjct: 522 LRRVFQALPELSPRRVLFTPSFAPKAEYEAAFALGVTVTVDNVEALRNWPEV--FRGRTI 579

Query: 119 GLRINPSVSYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNCENKSF 172
            LRI+           +     S+ G      ++  D   +    + G+  H     ++ 
Sbjct: 580 WLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVDVARTLEVTITGVHAHLGSGVETG 639

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-----V 227
             +  M   +          +E I +GGG+             +   +   +        
Sbjct: 640 EHWRMMYDELAGFARRIG-TVETIDIGGGLPIPYSAEDEPFDLEVWAKGLAEVKAVHPGY 698

Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----ATIY 282
           ++ +EPG  +V     L  +V   I ++  + V +D+ +   +   L          +  
Sbjct: 699 RLAIEPGRYLVAEAGVLLASVTQVIEKDGVHRVGLDAGMNTLIRPALYDAWHDIENLSQL 758

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPV-KIGDRISFEDVAGYNINRKNWFNGINMPT 341
                    + G  C + D+FG+          GD +   D   Y     + +N   +P 
Sbjct: 759 DAPADGMFDIVGPICESSDVFGKRRRLPAATAPGDVVLVADAGAYGYTMASTYNQRELPR 818

Query: 342 IAVKN 346
             V +
Sbjct: 819 EEVID 823


>gi|297282813|ref|XP_001093632.2| PREDICTED: ornithine decarboxylase 2-like [Macaca mulatta]
          Length = 446

 Score =  169 bits (429), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 58/364 (15%), Positives = 104/364 (28%), Gaps = 26/364 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+ L D   L +             V    A+KC ++  +   L     G   +S  E+ 
Sbjct: 63  PFMLADLDMLASRHQAFCQAL--PQVSPFYAVKCNSSPWVLRVLAALGTGFDCASQVELE 120

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                        Y    K        +     +    S+    K        ++ LR+ 
Sbjct: 121 QVLGLGVAPSRIIYANPCKPASHIRYAARHGVQLLTFDSEEELTKVAQHHPGARLLLRLR 180

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S S F L+                       V G  FH     ++   F+  + +  
Sbjct: 181 TQDSQSTFPLSTKFGASLEACGHLLTSARDMGLAVVGASFHVGSNCQTPQSFTQAIADCR 240

Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDF------CQRLKEFSEKYSVQIYLEPG 234
             F         +  + +GGG   T+   P  +           ++F E+  V++  EPG
Sbjct: 241 CVFEMGRGAGHDMSCLDIGGGFPGTEDSGPKFEEMARVISAALAQDFPEERGVKVIAEPG 300

Query: 235 EAIVTNTTTLNTTVLDIS-----------ENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
              + +  T    ++                  N     S    H             + 
Sbjct: 301 RFYMESVCTAAVNIIAKKAVLEPGGSRKLMYYLNDGHYGSFRLGHREPVPRVPIVVKEFC 360

Query: 284 NTGP-YTAMVCGRSCLAGD-IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
           +  P +   + G +C A D +F E      + +GD + F  +  Y  +    FNG  +P 
Sbjct: 361 SEPPLFPCTLYGPTCDASDRLFLEDVRLPELDVGDWLVFPSMGAYTSSMSCSFNGF-LPA 419

Query: 342 IAVK 345
               
Sbjct: 420 TICY 423


>gi|149622083|ref|XP_001513468.1| PREDICTED: similar to ornithine decarboxylase [Ornithorhynchus
           anatinus]
          Length = 461

 Score =  169 bits (429), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 67/375 (17%), Positives = 113/375 (30%), Gaps = 35/375 (9%)

Query: 6   YYLIDK-QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           +Y+ D    L  +L           V    A+KC  +  +  TL     G   +S  E+ 
Sbjct: 40  FYVADLGDVLKKHLRWYK---ALPRVTPFYAVKCNDSKAIVKTLAALGAGFDCASKTEIQ 96

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           L        E   Y    K        +N    +    S++   K        K+ LRI 
Sbjct: 97  LVQSIGVSPERIIYANPCKQVSQIKYAANSGVQMMTFDSEVELMKVNRAHPKAKLVLRIA 156

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S +   L+       +      ++ +    +V G+ FH          F   + +  
Sbjct: 157 TDDSKAVCRLSVKFGATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPDTFVQAVTDAR 216

Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPG 234
             F         +  + +GGG   ++      +           K F     V+I  EPG
Sbjct: 217 CVFDMGAELGFDMYLLDIGGGFPGSEDVKLKFEEITSVINPALEKYFPSDSGVRIIAEPG 276

Query: 235 EAIVTNTTTLNTT-------------------VLDISENIKNLVIVDSSVEAHVPDYLLY 275
              V +  TL                      V D +        V  S    + D+   
Sbjct: 277 RYYVASAFTLAVNIIAKKVVLKEQTGSDDEDDVNDKTIMYYVNDGVYGSFNCILYDHAHV 336

Query: 276 QESATIYPNTGP--YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
           +      P      Y+  + G +C   D   E      +++GD + FE++  Y +   + 
Sbjct: 337 KPILQKRPKPDESYYSCSIWGPTCDGLDRIVERCDMPELQVGDWMLFENMGAYTVAAAST 396

Query: 334 FNGINMPTIAVKNVD 348
           FNG   PTI      
Sbjct: 397 FNGFQRPTIYYVMSG 411


>gi|31982947|ref|NP_776555.1| ornithine decarboxylase [Bos taurus]
 gi|118373|sp|P27117|DCOR_BOVIN RecName: Full=Ornithine decarboxylase; Short=ODC
 gi|163449|gb|AAA92339.1| ornithine decarboxylase [Bos taurus]
 gi|1036793|gb|AAA79849.1| ornithine decarboxylase [Bos taurus]
 gi|148877459|gb|AAI46219.1| Ornithine decarboxylase 1 [Bos taurus]
 gi|296482246|gb|DAA24361.1| ornithine decarboxylase [Bos taurus]
          Length = 461

 Score =  169 bits (428), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 66/388 (17%), Positives = 121/388 (31%), Gaps = 33/388 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       +++    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 40  FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSRTIVKTLAAIGTGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        +N    +    S++   K        K+ LRI  
Sbjct: 98  VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++ +    +V G+ FH          F   + +   
Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELDIDVIGVSFHVGSGCTDPETFVQAISDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     V+I  EPG 
Sbjct: 218 VFDMGAEVGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPSDSGVRIIAEPGR 277

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY---------------QESAT 280
             V +  TL   ++     +K     D   E+    ++ Y                    
Sbjct: 278 YYVASAFTLAVNIIAKKLVLKEQTGSDDEEESTDRTFMYYVNDGVYGSFNCILYDHAHVK 337

Query: 281 IYPNTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                 P        + + G +C   D   E      + +GD + FE++  Y +   + F
Sbjct: 338 PLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTF 397

Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDY 362
           NG   PTI       T + +++    D+
Sbjct: 398 NGFQRPTIYYVMSGPTWQLMQQIRTQDF 425


>gi|170781871|ref|YP_001710203.1| diaminopimelate decarboxylase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169156439|emb|CAQ01587.1| diaminopimelate decarboxylase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 499

 Score =  169 bits (428), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 53/432 (12%), Positives = 112/432 (25%), Gaps = 69/432 (15%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK------NAGVKLLLALKCFAAWGMFDTLNQYMDGTT 56
            TP Y++D+  + +     L              ++  A K F +  +   + +      
Sbjct: 52  GTPLYVMDEDDVRSRAAETLAAFAREAAAVGTSARVYYAGKAFLSIEVARWMVEEGLHID 111

Query: 57  SSSLYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQK 113
             S  E+ +            ++   K               I+ ++  ++ +    A  
Sbjct: 112 VCSGGELAVALAAGADPARLGFHGNNKSVAEIDRAVGAGIGQIVVDSRVEVERIAAAAAA 171

Query: 114 L--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFH 164
               + + LR+N  V           R   + G   +D              +  GL  H
Sbjct: 172 HGRVQPVRLRVNSGVHAHTHEYLATAREDQKFGITLQDAPGVVARIRSHASLSFTGLHAH 231

Query: 165 NNCENKSFLCFSAMLKNIEKEFGHFITQ--IEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
              +      F    + +       +    +  ++LGGG                +    
Sbjct: 232 IGSQIFETDAFVESARRLLDLHERLLADGPVPELNLGGGFGIAYTSVDRPVPVPEIARRL 291

Query: 223 EKYSVQIY-----------LEPGEAIVTNTTTLNTTVLDISE------------------ 253
            +                 +EPG +IV  +T     V  + +                  
Sbjct: 292 ARIVGDECGRRGIPAPVIAVEPGRSIVGPSTATLYAVGTVKDVLVTVGGVDGEVAEASSA 351

Query: 254 ---------------NIKNLVIVDSSVEAHVPDYLLYQ----ESATIYPNTGPYTAMVCG 294
                           ++  V VD  +  +    L         A    +  P    + G
Sbjct: 352 TGDVEDARVAEEAETAVRRYVSVDGGMSDNARPALYGADYSVRIAGRASDADPALVRIAG 411

Query: 295 RSCLAGD-IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353
           + C +GD +    +    V+  D ++      Y     + +N I  P +           
Sbjct: 412 KHCESGDLVVLADYLPGDVRPHDLLAVPATGAYCWALASNYNWIGRPPVVAVRDGEARVI 471

Query: 354 IREFSYNDYYNN 365
           +R  +  D    
Sbjct: 472 VRGETEADLLAR 483


>gi|90426308|ref|YP_534678.1| ornithine decarboxylase [Rhodopseudomonas palustris BisB18]
 gi|90108322|gb|ABD90359.1| ornithine decarboxylase [Rhodopseudomonas palustris BisB18]
          Length = 380

 Score =  169 bits (428), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 46/358 (12%), Positives = 109/358 (30%), Gaps = 29/358 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   + +N  +          ++  A+K   A  +   L         +S+ E+ 
Sbjct: 21  PCLVVDLDVVRDNFQSFAKAL--PDSRVFYAVKANPAPEVLSLLASMGSCFDCASVQEIQ 78

Query: 65  LGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +        +  ++    K       A          +  +++ K    A        + 
Sbjct: 79  MALDAGATPDRISFGNTIKKERDIGRAFALGIRLFSVDCTAEVEKIARAAPGAKVFCRIL 138

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
                + +++ L+        +     D  +       G+ FH   + +    +   L  
Sbjct: 139 --YDCAGAEWPLSRKFGCDPEMAVDVLDLAKRLGLEAYGISFHVGSQQRKVKAWDRALAM 196

Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIYLE 232
               F         +  +++GGG                +   + L++       +  +E
Sbjct: 197 ASSVFRDCAERGINLSMVNMGGGFPTKYLKEVPAVVQYGRSIFRALRKHFGNAIPETIIE 256

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPN 284
           PG  +V N   + T V+ IS    +       ++          + + + Y   +     
Sbjct: 257 PGRGMVGNAGVIETEVVLISTKSDDDDTRWVYLDIGKFGGLAETMDESIRYAIKSRHDGA 316

Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338
                 ++ G +C + D+  E   +     ++IGD++  E    Y     +  FNG  
Sbjct: 317 EMT-PCVLAGPTCDSADVMYEKLPYPLPVTLEIGDKLLIEGTGAYTSTYSSVAFNGFP 373


>gi|281211064|gb|EFA85230.1| group IV decarboxylase [Polysphondylium pallidum PN500]
          Length = 436

 Score =  169 bits (428), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 59/369 (15%), Positives = 114/369 (30%), Gaps = 34/369 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++       +++    V    A+KC    G+   L         +S  E+  
Sbjct: 65  FFVADIGVIIKQWQ--KWVKHLPNVTPFYAVKCNPTMGILKVLEALGTSFDCASRTEIES 122

Query: 66  GHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                       Y    K       A  +N   + F+ +S+L K +    +    + +  
Sbjct: 123 VLSMGVDPSRIIYANPCKQITAIKYARTNNVKLMTFDNLSELEKIEKFFPEAELVLRIAP 182

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           + S S  +F                 +  +     V G+ FH          +   L+ +
Sbjct: 183 DDSKSLMRFGTKFGVHIDDC--SDLLEMAKEMNLKVVGVSFHVGSGCFDASAYDTALEMV 240

Query: 183 EKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV---QIYLEPGEA 236
            K F        ++  + +GGG      D     F + +++ + +      +I  EPG  
Sbjct: 241 RKVFDMAKTHGMELNLVDIGGGF-TGSNDEMFGKFTEVIRKKTAELFDSSVRIIAEPGRY 299

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVE-AHVPDYLLY---------------QESAT 280
               + TL  TV+      +            ++  Y  Y                   T
Sbjct: 300 FAAMSHTLAVTVISKRSIKQEDNRQHPRRTSNNMRQYNYYLADGVYGSFNNIQFDHAKPT 359

Query: 281 IY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                  N  P    + G +C + D+  +      +KIGD + F D+  Y     + FNG
Sbjct: 360 ALLLKPTNKAPTPCTLFGPTCDSIDVIAKDTQLPELKIGDWLYFPDMGAYTTASASSFNG 419

Query: 337 INMPTIAVK 345
              P +   
Sbjct: 420 FCPPPVYYY 428


>gi|188577968|ref|YP_001914897.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein
           [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188522420|gb|ACD60365.1| bifunctional diaminopimelate decarboxylase/asparta [Xanthomonas
           oryzae pv. oryzae PXO99A]
          Length = 850

 Score =  169 bits (428), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 57/365 (15%), Positives = 109/365 (29%), Gaps = 26/365 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y      +         I      +   A+K  A   +   L Q   G    S  E
Sbjct: 487 GTPRYAYHLPTVRARAHALAQIAAVD--QRYYAIKANAHPAILMALEQAGFGLECVSHGE 544

Query: 63  VMLGHEKFG---GETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           V    +           +  ++    E  A  +   T+  + V  L  + +      + I
Sbjct: 545 VRRVFQALPELSPRRVLFTPSFAPKAEYAAAFALGVTVTVDNVEALRNWPEV--FRGRNI 602

Query: 119 GLRINPSVSYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNCENKSF 172
            LRI+           +     S+ G      ++  D   +    + G+  H     ++ 
Sbjct: 603 WLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVDVARTLEVTITGVHAHLGSGVETG 662

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-----V 227
             +  M   +          +E I +GGG+                 +   +        
Sbjct: 663 EHWRMMYDELAGFARRIG-TVETIDIGGGLPIPYSAEDEPFDLDVWAKGLAEVKAVHPGY 721

Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----ATIY 282
           ++ +EPG  +V     L  +V   I ++    V +D+ +   +   L          +  
Sbjct: 722 RLAIEPGRYLVAEAGVLLASVTQVIEKDGVQRVGLDAGMNTLIRPALYDAWHDIENLSQL 781

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK-IGDRISFEDVAGYNINRKNWFNGINMPT 341
                 T  V G  C + D+FG+          GD +   D   Y  +  + +N   +P 
Sbjct: 782 DAPADSTFDVVGPICESSDVFGKRRRLPAATMPGDVVLVADTGAYGYSMASTYNQRELPR 841

Query: 342 IAVKN 346
             V +
Sbjct: 842 EEVID 846


>gi|58581056|ref|YP_200072.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein
           [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|58425650|gb|AAW74687.1| diaminopimelate decarboxylase [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 869

 Score =  169 bits (428), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 57/365 (15%), Positives = 109/365 (29%), Gaps = 26/365 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y      +         I      +   A+K  A   +   L Q   G    S  E
Sbjct: 506 GTPRYAYHLPTVRARAHALAQIAAVD--QRYYAIKANAHPAILMALEQAGFGLECVSHGE 563

Query: 63  VMLGHEKFG---GETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           V    +           +  ++    E  A  +   T+  + V  L  + +      + I
Sbjct: 564 VRRVFQALPELSPRRVLFTPSFAPKAEYAAAFALGVTVTVDNVEALRNWPEV--FRGRNI 621

Query: 119 GLRINPSVSYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNCENKSF 172
            LRI+           +     S+ G      ++  D   +    + G+  H     ++ 
Sbjct: 622 WLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVDVARTLEVTITGVHAHLGSGVETG 681

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-----V 227
             +  M   +          +E I +GGG+                 +   +        
Sbjct: 682 EHWRMMYDELAGFARRIG-TVETIDIGGGLPIPYSAEDEPFDLDVWAKGLAEVKAVHPGY 740

Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----ATIY 282
           ++ +EPG  +V     L  +V   I ++    V +D+ +   +   L          +  
Sbjct: 741 RLAIEPGRYLVAEAGVLLASVTQVIEKDGVQRVGLDAGMNTLIRPALYDAWHDIENLSQL 800

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK-IGDRISFEDVAGYNINRKNWFNGINMPT 341
                 T  V G  C + D+FG+          GD +   D   Y  +  + +N   +P 
Sbjct: 801 DAPADSTFDVVGPICESSDVFGKRRRLPAATMPGDVVLVADTGAYGYSMASTYNQRELPR 860

Query: 342 IAVKN 346
             V +
Sbjct: 861 EEVID 865


>gi|325916086|ref|ZP_08178375.1| diaminopimelate decarboxylase ;aspartate kinase [Xanthomonas
           vesicatoria ATCC 35937]
 gi|325537695|gb|EGD09402.1| diaminopimelate decarboxylase ;aspartate kinase [Xanthomonas
           vesicatoria ATCC 35937]
          Length = 869

 Score =  169 bits (428), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 52/365 (14%), Positives = 109/365 (29%), Gaps = 26/365 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y      +         I      +   A+K  A   +   L Q   G    S  E
Sbjct: 506 GTPRYAYHLPTVRARAHALAQIAAVD--QRYYAIKANAHPAILMALEQAGFGLECVSHGE 563

Query: 63  VMLGHEKFG---GETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           +    +           +  ++    E +A  +   T+  + V  L  + +      + +
Sbjct: 564 LRRVFQTLPELSPRRVLFTPSFAPKAEYEAAFALGVTVTVDNVEALRNWPEV--FRGRNV 621

Query: 119 GLRINPSVSYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNCENKSF 172
            LRI+           +     S+ G      ++  +   +    + G+  H     ++ 
Sbjct: 622 WLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVEAARTLEVTITGVHAHLGSGVETG 681

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-----V 227
             +  M   +          +E I +GGG+             +   +   +        
Sbjct: 682 EHWRMMYDELAGFARRIG-TVETIDIGGGLPIPYSAEDEPFDLEVWAKGLAEVKAVHPGY 740

Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----ATIY 282
           ++ +EPG  +V     L   V   I ++    V +D+ +   +   L          +  
Sbjct: 741 RLAIEPGRYLVAEAGVLLAGVTQVIEKDGVQRVGLDAGMNTLIRPALYDAWHDIENLSRL 800

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                    + G  C + D+FG+          GD +   D   Y  +  + +N   +P 
Sbjct: 801 DTAADGAFDIVGPICESSDVFGKRRRLPSSTAPGDVVLVADAGAYGYSMASTYNQRELPR 860

Query: 342 IAVKN 346
             V +
Sbjct: 861 EEVID 865


>gi|75675117|ref|YP_317538.1| Orn/DAP/Arg decarboxylase 2 [Nitrobacter winogradskyi Nb-255]
 gi|74419987|gb|ABA04186.1| ornithine decarboxylase [Nitrobacter winogradskyi Nb-255]
          Length = 380

 Score =  169 bits (428), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 44/358 (12%), Positives = 110/358 (30%), Gaps = 29/358 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   + +N             ++  A+K   A  +   L        ++++ E+ 
Sbjct: 21  PCLVVDLDIVRDNYQAFAKAL--PDSRVFYAVKANPAPEVLSLLASLGSCFDTATVAEIE 78

Query: 65  LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +        +  ++      +     A          +  +++ K    A        + 
Sbjct: 79  MALAAGATPDRISFGNTIKKERDIARAYALGIRLFAVDCHAEVEKIARAAPGAKVFCRIL 138

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
                + +++ L+        +  +  D  +       G+ FH   + +    +   L  
Sbjct: 139 --YDCAGAEWPLSRKFGCDPEMAVEVLDLAKRLSLEPIGISFHVGSQQRKVKAWDRALAM 196

Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIYLE 232
           + + F         +  +++GGG                +   + L++       +  +E
Sbjct: 197 VSQVFRDCAERGINLTMVNMGGGFPTRYLKDVPPVVQYGRSIFRALRKHFGNQIPETIIE 256

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPN 284
           PG  +V N   +   V+ IS    N       ++          + + + Y         
Sbjct: 257 PGRGMVGNAGVIEAEVVLISRKSDNEESRWVYLDIGKFGGLAETMDESIRYAIRTPHDGA 316

Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338
                 ++ G +C + D+  E   +     ++IGD++  E    Y     +  FNG  
Sbjct: 317 EMT-PCVLAGPTCDSADVLYEKQPYPLPVTLEIGDKLLIEGTGAYTSTYSSVAFNGFP 373


>gi|320006754|gb|ADW01604.1| diaminopimelate decarboxylase [Streptomyces flavogriseus ATCC
           33331]
          Length = 449

 Score =  169 bits (428), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 55/397 (13%), Positives = 125/397 (31%), Gaps = 39/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ID+  + +   + L     K   V +  A K F    M     +        S 
Sbjct: 30  GTPVYVIDESAVRDRCRSYLRAFRSKWPHVDVAYASKAFLVGEMVRLAAEEGLSLDVVSA 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKL--H 115
            E+ L            ++  YK  E     V S   +++ + + +++    +A++    
Sbjct: 90  GELRLALWAGASPSKITFHGNYKTGEDIELAVCSRVRSLVIDCLDEIDLIDRQAREHGRV 149

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
           + + +R+N  +              S+ G   +           +  +   + GL FH  
Sbjct: 150 QDVDIRLNLGIDIHTDPKYTTGDEASKFGLPVRRGDAASAVARVLTRDHLRLRGLHFHLG 209

Query: 167 CENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDK----DYPVKDFCQRL 218
            +             + + +         + + I++GGG+           P  ++ + L
Sbjct: 210 AQVLDTKYHRQALNEVGEFVRTVTARTPWKPQSITVGGGMGVNYDGVSSPPPPSEWARDL 269

Query: 219 KEFSEKYSVQIY-------LEPGEAIVTNTTTLNTTVLDISENIKNL-VIVDSSVEAHVP 270
                +             +EPG +++    +   TV     +     V VD  +  +  
Sbjct: 270 LSVFGEQVAPYCAPDVVFGVEPGRSVIAEAGSTLYTVGPTKRSGDRRLVAVDGGLSDNPR 329

Query: 271 DYLLYQESATIYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
             +       +  +         + A + GR C   D   +      +  G+ ++ +   
Sbjct: 330 PLMYQSVHNVVLASNPELRDTELHEATIFGRHCET-DRLIDGVRLPDLPPGEVLAVQCTG 388

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361
            Y  +  N  N  + P +       +   +R   ++D
Sbjct: 389 AYTHSMFNQHNRFDKPPVVFVRDGRSRLVVRRERFSD 425


>gi|114576087|ref|XP_001157086.1| PREDICTED: ornithine decarboxylase 1 isoform 6 [Pan troglodytes]
          Length = 457

 Score =  169 bits (428), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 65/384 (16%), Positives = 118/384 (30%), Gaps = 29/384 (7%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       +++    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 40  FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSKAIVKTLAAIGTGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        +N    +    S++   K        K+ LRI  
Sbjct: 98  VQSLGVLPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       R      ++ +    +V G+ FH          F   + +   
Sbjct: 158 DDSKAVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     V+I  EPG 
Sbjct: 218 VFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSDSGVRIIAEPGR 277

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL-----------LYQESATIYPN 284
             V +  TL   ++     +K     D   +  +                          
Sbjct: 278 YYVASAFTLAVNIIAKKIVLKEQTGSDGIEQTFMYYVNDGVYGSFNCILYDHAHVKPLLQ 337

Query: 285 TGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
             P        + + G +C   D   E      + +GD + FE++  Y +   + FNG  
Sbjct: 338 KRPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAAASTFNGFQ 397

Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362
            PTI         + +++F   D+
Sbjct: 398 RPTIYYVMSGPAWQLMQQFQNPDF 421


>gi|325120746|emb|CBZ56301.1| Diaminopimelate decarboxylase protein, related [Neospora caninum
           Liverpool]
          Length = 563

 Score =  169 bits (427), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 69/455 (15%), Positives = 119/455 (26%), Gaps = 93/455 (20%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--------------------------KNAGVKL---- 32
           +TP+YL D+ ++  N    L                                GV+     
Sbjct: 13  QTPFYLYDEARIRENCRRLLAAFSWASEPFSTSQSALENVPRSPREALENRLGVRAASPS 72

Query: 33  -----LLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKD-CE 85
                  A+K      + + L +   G   SSL E++L     F GE   +        E
Sbjct: 73  GAFTNYFAVKATPTPAILEILREEGLGADCSSLAELLLAEAAGFRGERIFFTSNDTPLEE 132

Query: 86  IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY------SKFILADPNRP 139
                     I  +  S L+   +K       I        +           +      
Sbjct: 133 FLKARDLGAIINLDDASHLDFLHEKLGGALPSILCFRFNPSAESRQATVQSNPMIMGRPE 192

Query: 140 FSRLGEKCKDKIESEIKNVNG------LMFHNNCENKSFLCFSAMLKNIEKEFGHF---- 189
            S+ G           +          L       + S        + +           
Sbjct: 193 ESKFGMTKTQLFRCISRARAWGVCRFALHAMILSNSLSVDEVVETARLLLTVAAEIKERL 252

Query: 190 ITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEKY-------SVQIYLEPGEAIV 238
            T IE I+LGGG     +       + +   R++ + +           +I  E G  I 
Sbjct: 253 GTTIEMINLGGGFGVPYRPEEKDLDLHEVSARIRTWYKCTLALQGLAGTRIVTENGRLIT 312

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT--------- 289
            +   L T V+   +  K  V VD+ +   +   +                         
Sbjct: 313 ADAGVLVTRVIHQKKTYKRFVGVDACMAHLMRPGMYGAYHHISVVPDRDRHDPRLPSRRN 372

Query: 290 -------------------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                                V G  C   D F        V IGD +   DV  +  + 
Sbjct: 373 LFFSPDDEDEEAGVSDDAIYDVVGGLCENNDKFAVDRPLPRVDIGDLLLIHDVGAHGHSM 432

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
              +NG       ++ ++G +  IR   + ND + 
Sbjct: 433 CFNYNGRLRCAEYLRRLNGEVVMIRRAETLNDLFA 467


>gi|218508585|ref|ZP_03506463.1| diaminopimelate decarboxylase protein [Rhizobium etli Brasil 5]
          Length = 350

 Score =  169 bits (427), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 55/343 (16%), Positives = 95/343 (27%), Gaps = 26/343 (7%)

Query: 40  AAWGMFDTLNQYMDGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDC--EIDAVLSNCDTI 96
           +   +  TL +   G    S  E+              ++   K       A+ +     
Sbjct: 8   SNQAVLKTLGRLGAGIDVVSEGELRRALAADISASRIMFSGVGKTPSEMDFALEAGIYCF 67

Query: 97  IFNTVSQLNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE 154
              +  +L     +A        +  RINP V           +  ++ G   +      
Sbjct: 68  NVESEPELEILNQRAVSAGKKAPVSFRINPDVDAKTHSKISTGKKENKFGISWERARAIY 127

Query: 155 IK-------NVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHF 204
                    +V G+  H   +      F    K +             I+ + +GGG+  
Sbjct: 128 AHAAKLPGIDVTGIDMHIGSQITELQPFDDAFKLLRDLVATLRADGHTIDHVDIGGGLGV 187

Query: 205 TDKDYPVKD-----FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNL 258
             KD          +   +K      + ++  EPG  IV N   L T VL + +   K  
Sbjct: 188 PYKDDNNPPPLPDAYAAIVKNQLRDLNCKVITEPGRLIVGNAGILVTEVLYVKDGGEKTF 247

Query: 259 VIVDSSVEAHVPDYLLYQESATI-----YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313
           VIVD ++   +   L               N     A V G  C  GD           K
Sbjct: 248 VIVDGAMNDLIRPTLYEAYHEIRPVTISAANAPRIRADVVGPVCETGDYLALDREMAMPK 307

Query: 314 IGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
            GD ++      Y   +   +N   +    +            
Sbjct: 308 PGDLLAVSTAGAYGAVQAGTYNSRLLVPEVLVKGGDFHAIRPR 350


>gi|126330477|ref|XP_001381464.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 480

 Score =  169 bits (427), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 54/359 (15%), Positives = 103/359 (28%), Gaps = 25/359 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           + + D   L+              V    A+KC  +  +   L     G   +S  E+  
Sbjct: 75  FMVADLGVLVEQHQIFQQALPR--VTPFYAVKCNNSPSVLQVLANLGTGFDCASQGELEQ 132

Query: 66  G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       Y    K        ++    +     +    K        ++ LR+  
Sbjct: 133 VLRMGIAPTRIIYANTCKQISHLQYAASHGVQLMTFDCEEEIAKIAKFYPTARLVLRLWT 192

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S S F L+                 +     V G  FH     ++   F+  + +   
Sbjct: 193 QDSESLFPLSAKFGAPLDQCGHLLTLAKDLGVTVVGACFHVGSGCQTPQSFNEAIADARH 252

Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYP-VKDFCQRLKEFSEKYSVQ-----IYLEPGE 235
            F         +  + +GGG        P  ++    +    ++Y  +     I  EPG 
Sbjct: 253 VFDLGLQIGHPMSLLDIGGGFPGKKNFVPTFEEMAAVINRALDQYFPEGSGVKIISEPGR 312

Query: 236 AIVTNTTTLNTTVLDISEN---------IKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286
              T   T    ++   +          +  L     +  A +      +    +     
Sbjct: 313 FYATMVCTAALNIIGKKDLVAEQGGRKLMYYLNDGFYTSFAIIRREKESRTPLVVKKFNC 372

Query: 287 P---YTAMVCGRSCLAGDIFG-EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
               Y +++ G +C A D  G        + +GD + FED+  Y     + FNG + P 
Sbjct: 373 KPLLYPSILWGPTCDAFDRLGPTDVLLPELHVGDWLIFEDMGAYTYTTSSNFNGFSRPE 431


>gi|224048733|ref|XP_002198114.1| PREDICTED: ornithine decarboxylase 1 [Taeniopygia guttata]
          Length = 460

 Score =  169 bits (427), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 63/392 (16%), Positives = 118/392 (30%), Gaps = 44/392 (11%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   ++       + +    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 40  FYVADLGDIVK--KHVRWHKALPRVTPFYAVKCNDSKAVVKTLAVLGAGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        ++    +    S++   K        K+ LRI  
Sbjct: 98  VQSIGVPPERIIYANPCKQVSQIKHAASSGVQMMTFDSEVELMKVARAHPKAKLVLRITT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++ +     + G+ FH          F   + +   
Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELDLAIVGVSFHVGSGCTDPETFVQAISDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     + I  EPG 
Sbjct: 218 VFDMGAELGFSMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPSDSGINIIAEPGR 277

Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270
             V +  TL   ++                          +++ +           AHV 
Sbjct: 278 YYVASAFTLAVNIIAKKIVLKEQTGSDDEDDANDKTLMYYVNDGVYGSFNCILYDHAHVK 337

Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
             L  +           Y+  + G +C   D   E      +++GD I FE++  Y +  
Sbjct: 338 PVLQKRPKPDDSC----YSCSIWGPTCDGLDRIVERFNMPELQVGDWILFENMGAYTVAA 393

Query: 331 KNWFNGINMPTIAVKNVDGTIKA---IREFSY 359
            + FNG   PTI         +    I+E  +
Sbjct: 394 ASTFNGFQRPTIHYVMSRPAWQLMQQIKEQGF 425


>gi|73979731|ref|XP_856512.1| PREDICTED: similar to Ornithine decarboxylase (ODC) isoform 4
           [Canis familiaris]
          Length = 457

 Score =  169 bits (427), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 63/375 (16%), Positives = 112/375 (29%), Gaps = 29/375 (7%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       +++    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 40  FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSRTIVKTLAAIGTGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        SN    +    S++   K        K+ LRI  
Sbjct: 98  VQSLGVPPERIIYANPCKQVSQIKYASNNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++      +V G+ FH          F   + +   
Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERARELNIDVIGVSFHVGSGCTDPETFVQAISDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     V++  EPG 
Sbjct: 218 VFDMGAEVGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPADSGVRVIAEPGR 277

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL-----------LYQESATIYPN 284
             V +  TL   ++     +K     D + +  +                          
Sbjct: 278 YYVASAFTLAVNIIAKKLVLKEQTGSDGTYKGFMYYVNDGVYGSFNCILYDHAHVKPLLQ 337

Query: 285 TGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
             P          + G +C   D   E      + +GD + FE++  Y +   + FNG  
Sbjct: 338 KRPKPDEKYYSTSIWGPTCDGLDRIVERCDLPEIHVGDWMLFENMGAYTVAAASTFNGFQ 397

Query: 339 MPTIAVKNVDGTIKA 353
            PTI       T + 
Sbjct: 398 RPTIYYVMSGPTWQL 412


>gi|310923182|ref|NP_001185615.1| ornithine decarboxylase 1 [Macaca mulatta]
          Length = 461

 Score =  169 bits (427), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 67/392 (17%), Positives = 124/392 (31%), Gaps = 41/392 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       +++    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 40  FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSKAIVKTLAAVGTGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        +N    +    S++   K        K+ LRI  
Sbjct: 98  VQNLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVTRAHPKAKLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       R      ++ +    +V G+ FH          F   + +   
Sbjct: 158 DDSKAVCRLSVKFGATLRNSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   +++     +           K F     V+I  EPG 
Sbjct: 218 VFDMGAEVGFSMYLLDIGGGFPGSEEVKLKFEEITNVINPALDKYFPADSGVRIIAEPGR 277

Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270
             V +  TL   ++                          +++ +           AHV 
Sbjct: 278 YYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVK 337

Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
             L  +           Y++ + G +C   D   E      + +GD + FE++  Y +  
Sbjct: 338 PLLQKRPKPD----EKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAA 393

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
            + FNG   PTI         + +++F   D+
Sbjct: 394 ASTFNGFQRPTIYYVMSGPAWQLMQQFQNPDF 425


>gi|126303210|ref|XP_001371947.1| PREDICTED: similar to ornithine decarboxylase [Monodelphis
           domestica]
          Length = 461

 Score =  169 bits (427), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 66/374 (17%), Positives = 117/374 (31%), Gaps = 33/374 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       + +    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 40  FYVADLGDILK--KHLRWYKALPRVTPFYAVKCNDSRAILKTLAAVGAGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        +N    +    S++   K        K+ LRI  
Sbjct: 98  VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++ +    +V G+ FH          F   + +   
Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQAVSDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F     F   +  + +GGG   ++      +           K F     V+I  EPG 
Sbjct: 218 VFDMGAEFGFNMYLLDIGGGFPGSEDVKLKFEEISSVINPALDKYFPPDSGVRIIAEPGR 277

Query: 236 AIVTNTTTLNTTVL-------------------DISENIKNLVIVDSSVEAHVPDYLLYQ 276
             V +  TL   ++                   D +        V  S    + D+   +
Sbjct: 278 YYVASAFTLAVNIIAKKLVLKEQTGSDDEDEANDQTFMYYVNDGVYGSFNCILFDHAHVK 337

Query: 277 E--SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                   P+   Y++ + G +C   D   E      + +GD + FE++  Y +   + F
Sbjct: 338 PLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAAASTF 397

Query: 335 NGINMPTIAVKNVD 348
           NG   PTI      
Sbjct: 398 NGFQRPTIYYVMSG 411


>gi|73979733|ref|XP_856558.1| PREDICTED: similar to Ornithine decarboxylase (ODC) isoform 5
           [Canis familiaris]
          Length = 457

 Score =  168 bits (426), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 63/377 (16%), Positives = 113/377 (29%), Gaps = 33/377 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       +++    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 40  FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSRTIVKTLAAIGTGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        SN    +    S++   K        K+ LRI  
Sbjct: 98  VQSLGVPPERIIYANPCKQVSQIKYASNNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++      +V G+ FH          F   + +   
Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERARELNIDVIGVSFHVGSGCTDPETFVQAISDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     V++  EPG 
Sbjct: 218 VFDMGAEVGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPADSGVRVIAEPGR 277

Query: 236 AIVTNTTTLNTTVLDIS-------------------ENIKNLVIVDSSVEAHVPDYLLYQ 276
             V +  TL   ++                              V  S    + D+    
Sbjct: 278 YYVASAFTLAVNIIAKKLVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHA--H 335

Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
               +      ++  + G +C   D   E      + +GD + FE++  Y +   + FNG
Sbjct: 336 VKPLLQKVPSEHSISIWGPTCDGLDRIVERCDLPEIHVGDWMLFENMGAYTVAAASTFNG 395

Query: 337 INMPTIAVKNVDGTIKA 353
              PTI       T + 
Sbjct: 396 FQRPTIYYVMSGPTWQL 412


>gi|224583151|ref|YP_002636949.1| amino acid decarboxylase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|224467678|gb|ACN45508.1| putative amino acid decarboxylase [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
          Length = 465

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 76/418 (18%), Positives = 136/418 (32%), Gaps = 57/418 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+Y+  + +++ N+             K   A K  +  G+   +        ++S Y
Sbjct: 45  PTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQY 104

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116
           EV    E  F G+   +N   K           D   I  +++ +L      ++KL K  
Sbjct: 105 EVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVA 164

Query: 117 KIGLRINPSVSYSKF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170
            + +R+ P+V  +          A       +  E C+  +     ++ GL  H   +  
Sbjct: 165 NVCVRVEPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILAMTYVHLRGLHMHVGDQVP 224

Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPV--------------- 211
               F+   K +  E          + + I++GGGI    K                   
Sbjct: 225 ESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDDENGDPLKDNMYAGITA 284

Query: 212 KDFCQRLKEFSEKYSVQ--IYLEPGEAIVTNTTTLNTTV----------------LDISE 253
           ++F   +     K+     I +EPG  +  +   L T V                  +  
Sbjct: 285 QNFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLTEVSCEKRKTNYDLNGNVECHVEW 344

Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF------GEFH 307
              +      S   H  D+  Y  +A+           + G  C  GD F       EF 
Sbjct: 345 KFVDAGYSVLSDSQHF-DWFFYVYNASRMTAAHDAWVKLAGPLCDGGDYFHMGVKGEEFL 403

Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364
             K   +GD ++F D   Y I  +  +N      + + + +G  + IR   SY D   
Sbjct: 404 LPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMIDKNGETRLIRREDSYEDMVK 461


>gi|83816719|ref|YP_444447.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein
           [Salinibacter ruber DSM 13855]
 gi|83758113|gb|ABC46226.1| diaminopimelate decarboxylase [Salinibacter ruber DSM 13855]
          Length = 870

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 50/363 (13%), Positives = 103/363 (28%), Gaps = 25/363 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           ++P Y+ D + +    D    +      +   A+K      +   L +   G    S  E
Sbjct: 508 ESPRYVYDPEVVTARSDEVQGL--GPIDQSFYAVKANPHPEVLRLLERRGLGFECVSPGE 565

Query: 63  VMLGHE---KFGGETHAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           +    E           +   +    E          +  + V  L +  D      +++
Sbjct: 566 LDRVFEACPGLDPARVLFQPNFAAPAEYADAFERGVHVTVDNVQPLAEHPDV--FAGEEL 623

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172
            +R++P                S+ G    D       ++     V GL  H        
Sbjct: 624 FVRVDPGQGEGHHRKVRTAGAQSKFGVVPDDLGRLRAAVDQAGATVVGLHAHVGSGITDE 683

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFT-----DKDYPVKDFCQRLKEFSEKYSV 227
             ++ ++  +          +  +++GGG+                     K  +     
Sbjct: 684 STWAGLVDLLA-SLAAEFPAVRALNVGGGLGVPNASGGRPLDLDALDAALGKAAARHPQY 742

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATI----Y 282
            +++EPG  +V     L   V           +  D+ + + +   L       +     
Sbjct: 743 DLWMEPGRYLVAEAGVLLARVTQTKTKDAAAYVGLDTGMNSLLRPALYGAHHEIVNLSRL 802

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
                 TA V G  C  GD+ G      P + GD +       Y  +  N +N     + 
Sbjct: 803 DEPPAMTADVVGPVCETGDVLGHDRRLPPTEPGDTLLVATTGAYGASMSNRYNLREPASE 862

Query: 343 AVK 345
            + 
Sbjct: 863 VML 865


>gi|73979737|ref|XP_856636.1| PREDICTED: similar to Ornithine decarboxylase (ODC) isoform 7
           [Canis familiaris]
          Length = 462

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 64/380 (16%), Positives = 113/380 (29%), Gaps = 34/380 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       +++    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 40  FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSRTIVKTLAAIGTGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        SN    +    S++   K        K+ LRI  
Sbjct: 98  VQSLGVPPERIIYANPCKQVSQIKYASNNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++      +V G+ FH          F   + +   
Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERARELNIDVIGVSFHVGSGCTDPETFVQAISDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     V++  EPG 
Sbjct: 218 VFDMGAEVGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPADSGVRVIAEPGR 277

Query: 236 AIVTNTTTLNTTVLDIS-------------------ENIKNLVIVDSSVEAHVPDYLLYQ 276
             V +  TL   ++                              V  S    + D+   +
Sbjct: 278 YYVASAFTLAVNIIAKKLVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVK 337

Query: 277 ESATIYPNTGPYTAM---VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                 P+          + G +C   D   E      + +GD + FE++  Y +   + 
Sbjct: 338 PLLQKVPSEHNEKYYSTSIWGPTCDGLDRIVERCDLPEIHVGDWMLFENMGAYTVAAAST 397

Query: 334 FNGINMPTIAVKNVDGTIKA 353
           FNG   PTI       T + 
Sbjct: 398 FNGFQRPTIYYVMSGPTWQL 417


>gi|242237573|ref|YP_002985754.1| Orn/DAP/Arg decarboxylase 2 [Dickeya dadantii Ech703]
 gi|242129630|gb|ACS83932.1| Orn/DAP/Arg decarboxylase 2 [Dickeya dadantii Ech703]
          Length = 442

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 44/398 (11%), Positives = 107/398 (26%), Gaps = 35/398 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP+Y+   ++L             + + +  +LK      + + L     G    S  
Sbjct: 28  IGTPFYVYSARQLRRQFGQLRQRLP-SNIDIYYSLKANPNLSVVNLLVTEGAGCEVCSPT 86

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+          +   Y    K               I+  ++++L+    +A       
Sbjct: 87  ELETALAAGVAPQRVLYVGPGKSLAALEHAIDKQVRAIVAESIAELDAINRQAAASGSVQ 146

Query: 119 GLRINPSVSYS-KFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
            + +  +  ++ +      +   ++ G   ++   +           + G   +      
Sbjct: 147 TVALRINPDFNVEHARLVMSGKPTQFGLSLENAHAALASLSRWPFIALRGFHIYLGTRIL 206

Query: 171 S----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFS 222
           +          +L+        +   ++++ +GGG         +   +      L   +
Sbjct: 207 NAQAIADNTRHILQLARALRDRYRLSLDFVDVGGGFGVPYFPKEQPLDLPQLGDALTRIA 266

Query: 223 EKY-----SVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAH-------- 268
           + +       +I +E G  +V       T V  +     K   + D     H        
Sbjct: 267 DDFAAQAPDTRIIIELGRYLVAEAGMFVTRVNTLKTAGDKQFAVCDGGANCHSAAAGLNS 326

Query: 269 VPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
           +                      V G  C   D+ G+      + +GD I       Y +
Sbjct: 327 MLRKNFPLRRLGDNRQRPTQRYQVSGPLCTPTDLLGDNVLLPELTVGDLIGITHSGAYGL 386

Query: 329 NRKN-WFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
                 F     P   + + D  +   +  +       
Sbjct: 387 TASPGHFLSFGYPAEIMVDGDRVLLIRQPETSRQLLER 424


>gi|325000566|ref|ZP_08121678.1| diaminopimelate decarboxylase [Pseudonocardia sp. P1]
          Length = 443

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 58/394 (14%), Positives = 120/394 (30%), Gaps = 34/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP  ++D   + +            G +++ A K F   G    + Q      + S  E
Sbjct: 50  GTPLQVLDSADIRSRCRAYHDAL--PGAEIIYAGKAFLCRGTARLVAQEGCSIDACSGGE 107

Query: 63  VMLGHEKF-GGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           V +       GE    +      +    A  +    I+ ++V ++++    A +  +K+ 
Sbjct: 108 VAVAAAAGVPGERILLHGTVKTDEDLKAAFAARVGRIVIDSVGEIDRIAAAAPR-RQKVL 166

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENKSF 172
           LR+ P +              S  G    +        +      + GL  H   +  S 
Sbjct: 167 LRVRPDIDARTHPGLTTATADSWFGIAAGEVLAAVGRILARPQLRLIGLHCHLGSQVCSI 226

Query: 173 LCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSEK 224
             +      M++ +      +  ++  + LGGG      +         F + ++     
Sbjct: 227 SRYEAAATRMVEVLAAVRARYGLELPQLDLGGGHAVGYAEGERSTDPVSFGRAVRRAVSG 286

Query: 225 YS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQ 276
                     Q+ +EPG AIV         V  +  +     + VD  +  +    L   
Sbjct: 287 ACTAHGIVEPQLLVEPGRAIVARAGVTLYRVAAVERSGGRSTVLVDGGMSDNPRPALYGA 346

Query: 277 ESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRK 331
                              V GR C + D+  +       +  GD ++      Y  +  
Sbjct: 347 RYPVRLVGRATRADLEPMRVAGRHCESTDVLADAVRLPADLTAGDVLAMPVSGAYQASMA 406

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           + +N I    +   +   T+  +R  +  D    
Sbjct: 407 STYNQIPRVPVVAVSGGATLPLLRRDTPEDLLRR 440


>gi|291232632|ref|XP_002736260.1| PREDICTED: Ornithine DeCarboxylase family member (odc-1)-like
           [Saccoglossus kowalevskii]
          Length = 614

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 54/334 (16%), Positives = 112/334 (33%), Gaps = 28/334 (8%)

Query: 34  LALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG-HEKFGGETHAYNVA-YKDCEIDAVLS 91
            A+K      +   L          S  E+ L     F  +   +N       EI+  ++
Sbjct: 279 YAVKANNNLTILRILRDLGCTAVLVSGNELKLAMLAGFSTDKLVFNGNGKTQWEIELAVT 338

Query: 92  NCDTIIFNTVSQLNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD 149
           +   I  +++  ++     A++L    K+ LR+NP +              S+ G    D
Sbjct: 339 HDVMINADSLFDIDHISSVARQLGKKVKMLLRMNPDIDPEVHRYLATGSAVSKFGIPETD 398

Query: 150 KIESE-------IKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLG 199
              +          ++ GL  H      +   F A +  + +   H      +++++++G
Sbjct: 399 LDTALGKAGSDDNIDLVGLHCHIGSTITNIDVFRATVSAMLRYNNHVQGRGFRLKYLNVG 458

Query: 200 GGIHFTDKDY---------PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD 250
           GG+    + Y            +    + +  ++  + + LEPG +I+ +   L + V+ 
Sbjct: 459 GGLGINYRKYIQGGSPGIPSGGELIDSIADKIKESGLCLILEPGRSIIASAGILVSKVIG 518

Query: 251 ISENIKNLV-IVDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRSCLAGDIFGE 305
           I  N      ++D S+   +   L               +G     V G  C  GD   E
Sbjct: 519 IKRNETRSFLVIDGSMTEVMRPCLYGAYHHIQLIEPVKTSGTRRYSVVGPVCECGDYLAE 578

Query: 306 FHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                    G  ++  D   Y  +  + +N    
Sbjct: 579 DIELPIPHEGCGLAIRDAGAYCASMSSNYNMRVR 612


>gi|237718347|ref|ZP_04548828.1| diaminopimelate decarboxylase [Bacteroides sp. 2_2_4]
 gi|229452280|gb|EEO58071.1| diaminopimelate decarboxylase [Bacteroides sp. 2_2_4]
          Length = 365

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 62/344 (18%), Positives = 113/344 (32%), Gaps = 26/344 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           ++TP+Y  D + L + L      + K     +  A+K  A   +   + +   G    S 
Sbjct: 13  LQTPFYYYDTKVLRDTLSAINHEVAKYPNYSVHYAVKANANPKVLTIIRESGMGADCVSG 72

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDK--AQKLH 115
            E+       F      +    K      +        FN  ++ +L    +   AQ   
Sbjct: 73  GEIRAAIRAGFPANKVVFAGVGKADWEINLGLEYGIFCFNVESIPELEVINELAAAQNKV 132

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE 168
             +  RINP V              ++ G   +D         E +     GL FH   +
Sbjct: 133 ANVAFRINPDVGAHTHANITTGLAENKFGISMQDMDKVIDVAQEMKNVKFIGLHFHIGSQ 192

Query: 169 N---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-------DFCQRL 218
                 F+     +  ++ +       +E I++GGG+         +        F    
Sbjct: 193 ILDMGDFVALCNRVNELQDKLEARRILVEHINVGGGLGIDYGHPNRQAIPNFKDYFATYA 252

Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQE 277
            +   +    ++ E G A+V    +L + VL + +   K   I+D+ +   +   L    
Sbjct: 253 GQLKLRPYQTLHFELGRAVVGQCGSLISKVLYVKQGTRKKFAILDAGMTDLIRPALYQAF 312

Query: 278 S--ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319
                I          V G  C + D+FG+      VK GD I+
Sbjct: 313 HKMENITSEEPLEAYDVVGPICESSDVFGKAIDLNKVKRGDLIA 356


>gi|163852839|ref|YP_001640882.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium extorquens PA1]
 gi|163664444|gb|ABY31811.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium extorquens PA1]
          Length = 431

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 45/390 (11%), Positives = 93/390 (23%), Gaps = 37/390 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   +                ++  ++K      +    +Q   G   +S  E
Sbjct: 41  GTPLFVYDADTMRRTYRALCAALAGF-AEVDFSVKANPNPAVIRVFSQEGAGAEIASGAE 99

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
                      E   +    K       +       I      ++ +    A++    + 
Sbjct: 100 FDAAIRAGVPPEKILFAGPGKGAADLDRVIGGGIGEIHLENREEIVRVAAAAERHGVHVR 159

Query: 120 LRINPSVSYSKFIL-ADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKS 171
           + +  +   +            S  G   +D   +           + GL      +   
Sbjct: 160 VALRVNPGATAQGGAMRMGGKPSPFGFDEEDIEAAIDTVEAEPRLRLIGLHLFAGTQGLK 219

Query: 172 FLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPV-----------KDFCQ 216
                           +        +E I LGGG+                     D   
Sbjct: 220 ADTLLGQWAYGLGLAARIANRIGRPLETIDLGGGLGIPYFSGDTALDLGAIRAGLPDLIA 279

Query: 217 RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY---- 272
            L+      S ++ LEPG  +          VL + E+  +  ++      H        
Sbjct: 280 TLRADPRLASARVVLEPGRYLTGPAGVYVARVLAVKESRGSRFVITDGGMHHHLAASGNL 339

Query: 273 -----LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
                  +  +A            V G  C   D+        P+  GD ++      Y 
Sbjct: 340 GQIVKRDFPLAAVTDAGGERAATAVVGPLCTPLDMLARAAPLPPLPEGDLVAVLQSGAYG 399

Query: 328 INRK-NWFNGINMPTIAVKNVDGTIKAIRE 356
           +      F     P   + +     +    
Sbjct: 400 LTASPTGFLSHPTPAEVLVDGGEAREIRAR 429


>gi|159184868|ref|NP_354660.2| diaminopimelate decarboxylase [Agrobacterium tumefaciens str. C58]
 gi|159140149|gb|AAK87445.2| diaminopimelate decarboxylase [Agrobacterium tumefaciens str. C58]
          Length = 393

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 43/387 (11%), Positives = 96/387 (24%), Gaps = 35/387 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +L D   +                 +  ++K      +     +   G   +S+ E
Sbjct: 9   GTPCFLYDNSAMRQAYRDLETALSGF-ADIYYSVKANPLPAIISLFREEGAGAEIASVGE 67

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
                      +   +    K       +       I   +  ++ + +   + +   I 
Sbjct: 68  YRAAVKAGVAPDNIIFAGPGKSMAELREVIEGGIGEIHIESAEEIARIEAINRPVKASIR 127

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE----IKNVNGLMFHNNCENKSFLCF 175
           +   P        +      F    E+ ++ ++        ++ G+  +   +       
Sbjct: 128 INPVPDAQAGAMRMGGKATAFGFDEEELENVLKLFANVRHIDLVGIHIYGGTQILDADML 187

Query: 176 SAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDY-----------PVKDFCQRLKE 220
            +  ++     G         +E I LGGG+                   + D    LK 
Sbjct: 188 VSQWRHAIALAGRMAQMLGKPLETIDLGGGLGIPYFAGETSLDLAKVAAAIPDLKALLKA 247

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-------- 272
                   + +EPG  +          V  +  +     +V      H            
Sbjct: 248 HPLIADAHVIVEPGRFLAGPGGLYVVEVNSVKTSRGTTFVVTDGGMHHHLAASGNLGQIV 307

Query: 273 --LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                  +  +       TA + G  C   D          +  GD ++      Y  + 
Sbjct: 308 KRNYPIVAPAMMQAAHDETATIVGPLCTPLDTLARNATLPKLNAGDLLAILQSGAYGASA 367

Query: 331 KN-WFNGINMPTIAVKNVDGTIKAIRE 356
               F    +    +   DG  + I  
Sbjct: 368 SPGGFLSHTVAKEVLV-EDGAFEVIGR 393


>gi|317494190|ref|ZP_07952606.1| diaminopimelate decarboxylase [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316917963|gb|EFV39306.1| diaminopimelate decarboxylase [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 465

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 76/418 (18%), Positives = 140/418 (33%), Gaps = 57/418 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR-KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+Y+  + +++ N+         +A  K   A K  +  G+   +        ++SLY
Sbjct: 45  GTPFYVFSEPEIVRNIKEIEQAFSAHANTKTFFASKTCSVMGVLKAIKDAGICAEANSLY 104

Query: 62  EVMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116
           EV    E  F G    +N      +    A+ +    I  +++ +L+   + +++L K  
Sbjct: 105 EVRKCLEIGFSGSQIVFNGVVKKPEDLEYAIDNELYLINVDSLYELDHIDEISRRLKKTA 164

Query: 117 KIGLRINPSVSYSKF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170
            + +R+ P+V  +          A       +  E C+  ++     + GL  H   +  
Sbjct: 165 NVCVRVEPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILQMPYVKLRGLHMHVGDQVP 224

Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDY---------------PV 211
               F+   K +  E          + + I++GGGI    K                   
Sbjct: 225 ESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDEENGDPLKDNMYAGITA 284

Query: 212 KDFCQRLKEFSEKYSVQ--IYLEPGEAIVTNTTTLNTTV----------------LDISE 253
           +DF   +     K+     I +EPG  +  +   L T V                  +  
Sbjct: 285 QDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLTDVSCEKRKTNYDLEGNVECHVEW 344

Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF------GEFH 307
              +      S   H  D+  Y  +A+           + G  C  GD F       EF 
Sbjct: 345 KFVDAGYSVLSDSQHF-DWFFYVYNASRITEPHDQYIKLAGPLCDGGDYFHMGVKGEEFL 403

Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364
                +IGD + F D   Y I  +  +N      + + +  G  + IR   +Y D   
Sbjct: 404 LPHDTQIGDVVVFLDAGAYTIESQTVYNNRPRTAVVMIDNQGKDRLIRREDTYEDMVK 461


>gi|86751645|ref|YP_488141.1| ornithine decarboxylase [Rhodopseudomonas palustris HaA2]
 gi|86574673|gb|ABD09230.1| ornithine decarboxylase [Rhodopseudomonas palustris HaA2]
          Length = 380

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 49/356 (13%), Positives = 110/356 (30%), Gaps = 25/356 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   + +N  +          ++  A+K   A  +   L         +S+ E+ 
Sbjct: 21  PCLVVDLDVVRDNFASFAKAL--PDSRVFYAVKANPAPEVLSLLASLGSCFDCASVQEIQ 78

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +        +  ++    K     A        +F+        K        K+  RI 
Sbjct: 79  MALAAGATPDRISFGNTIKKERDIARAFALGIRLFSVDCSAEVEKIARSAPGSKVFCRIL 138

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              + +++ L+        +     D  +       G+ FH   + +    +   L    
Sbjct: 139 YDCAGAEWPLSRKFGCDPEMAVDVLDAAKRLGLEPYGISFHVGSQQRKVKAWDRALAMAA 198

Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIYLEPG 234
             F         +  +++GGG                +   + L++       +  +EPG
Sbjct: 199 TVFRDCAERGINLSMVNMGGGFPTKYLKEVPAVVQYGRSIFRALRKHFGNQIPETIIEPG 258

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPNTG 286
             +V N   + T V+ IS+      +    ++          + + + Y   +       
Sbjct: 259 RGMVGNAGIIETEVVLISKKSDEDEMRWVYLDIGKFGGLAETMDESIRYAIKSRHDGAEM 318

Query: 287 PYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338
               ++ G +C + D+  E   +     ++IGD++  E    Y        FNG  
Sbjct: 319 A-PCVLAGPTCDSADVMYEKLPYPLPVTLEIGDKLLIEGTGAYTSTYSAVAFNGFP 373


>gi|115526790|ref|YP_783701.1| ornithine decarboxylase [Rhodopseudomonas palustris BisA53]
 gi|115520737|gb|ABJ08721.1| ornithine decarboxylase [Rhodopseudomonas palustris BisA53]
          Length = 380

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 47/358 (13%), Positives = 110/358 (30%), Gaps = 29/358 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D + + +N  T          ++  A+K   A  +   L         +S+ E+ 
Sbjct: 21  PCLVVDLEVVRDNFQTFATAL--PDSRVFYAVKANPAPEVLTLLASMGSCFDCASVAEIE 78

Query: 65  LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +        +  +Y      +     A          +  +++ K    A        + 
Sbjct: 79  MALAAGATPDRISYGNTIKKERDIARAFALGIGLYSVDCAAEVEKIARVAPGARVFCRIL 138

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
                + +++ L+        +     D  +       G+ FH   + +    +   L  
Sbjct: 139 --YDCAGAEWPLSRKFGCDPEMAVDVLDLAKRLGLEPYGISFHVGSQQRKVKAWDRALAM 196

Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIYLE 232
               F         +  +++GGG                +   + L++       +  +E
Sbjct: 197 ASSVFRDCAERGINLSMVNMGGGFPTKYLKEVPAVVQYGRSIFRALRKHFGNQIPETIIE 256

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPN 284
           PG  +V N   + T V+ IS       +    ++          + + + Y   +     
Sbjct: 257 PGRGMVGNAGIIETEVVLISRKSDEDDVRWVYLDIGKFGGLAETMDESIRYAIRSRHDGA 316

Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338
                 ++ G +C + D+  E   +     ++IGD++  E    Y     +  FNG  
Sbjct: 317 EMT-PCVLAGPTCDSADVMYEKLPYPLPVTLEIGDKLLIEGTGAYTSTYSSVAFNGFP 373


>gi|239906758|ref|YP_002953499.1| decarboxylase [Desulfovibrio magneticus RS-1]
 gi|239796624|dbj|BAH75613.1| decarboxylase [Desulfovibrio magneticus RS-1]
          Length = 417

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 59/393 (15%), Positives = 104/393 (26%), Gaps = 32/393 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            T   L D   L   ++          V    A+K      +   L Q   G  ++SL E
Sbjct: 17  DTAVVLYDLDALTARVEALTSAFPAETVH-AFAVKACPLPPVLAMLAQLGLGAEAASLGE 75

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA---QKLHKKI 118
           + L     F  E   ++   K  E   +  +    +           D       L  + 
Sbjct: 76  IHLALAAGFPSERIVFDSPAKTVEELRLALSLGLFVNADNLDELDRLDDLGRDMGLVPRA 135

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK-----IESEIKNVNGLMFHNNCENKSFL 173
           GLRINP     +         +S+ G     +            ++GL  H   +     
Sbjct: 136 GLRINPQAGTGRIKATSVAGRYSKFGVPLPQREAIVDAFGRYPWLSGLHVHIGSQGCPLE 195

Query: 174 CFSA----MLKNIEKEFGHFIT-QIEWISLGGGIHFTDKDYPVKDFCQRL-------KEF 221
              A    +          F   ++    LGGG+    +D       Q            
Sbjct: 196 LLVAGVGAVYDLAADLDARFGPGRVAVFDLGGGLPAAYRDADRPPSPQAYFEALRVRCPG 255

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESAT 280
            E    ++  E G  +        + V  +     +   ++    +  V +    +    
Sbjct: 256 LEGNQRRLVTEFGRMMAAPCAVAASRVEYVKRQPGHRTAVMHLGADMFVRECYNPRFWPH 315

Query: 281 ---------IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                    +     P    + G  C +GD             GD +  EDV  Y ++  
Sbjct: 316 RTRLLGAHGLEKQGKPVLHHLAGPLCFSGDFPVRRAMLPEATAGDIVVIEDVGAYTLSMW 375

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           + +N   MP +                  D   
Sbjct: 376 SRYNSRQMPRVLGLRQGHFSVLREREEPEDLVQ 408


>gi|326624185|gb|EGE30530.1| putative amino acid decarboxylase [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
          Length = 460

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 77/418 (18%), Positives = 136/418 (32%), Gaps = 57/418 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+Y+  + +++ N+             K   A K  +  G+   +        ++S Y
Sbjct: 40  PTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQY 99

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116
           EV    E  F G+   +N   K           D   I  +++ +L      ++KL K  
Sbjct: 100 EVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVA 159

Query: 117 KIGLRINPSVSYSKF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170
            + +R+ P+V  +          A       +  E C+  +     ++ GL  H   +  
Sbjct: 160 NVCVRVEPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMHVGDQVP 219

Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPV--------------- 211
               F+   K +  E          + + I++GGGI    K                   
Sbjct: 220 ESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDDENGDPLKDNMYAGITA 279

Query: 212 KDFCQRLKEFSEKYSVQ--IYLEPGEAIVTNTTTLNTTV----------------LDISE 253
           +DF   +     K+     I +EPG  +  +   L T V                  +  
Sbjct: 280 QDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLTEVSCEKRKTNYDLNGNVECHVEW 339

Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF------GEFH 307
              +      S   H  D+  Y  +A+           + G  C  GD F       EF 
Sbjct: 340 KFVDAGYSVLSDSQHF-DWFFYVYNASRMTAAHDAWVKLAGPLCDGGDYFHMGVKGEEFL 398

Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364
             K   +GD ++F D   Y I  +  +N      + + + +G  + IR   SY D   
Sbjct: 399 LPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMIDKNGETRLIRREDSYEDMVK 456


>gi|161612905|ref|YP_001586870.1| hypothetical protein SPAB_00611 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|198242305|ref|YP_002216433.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|207857778|ref|YP_002244429.1| amino acid decarboxylase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|161362269|gb|ABX66037.1| hypothetical protein SPAB_00611 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|197936821|gb|ACH74154.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|206709581|emb|CAR33926.1| putative amino acid decarboxylase [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
          Length = 465

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 77/418 (18%), Positives = 136/418 (32%), Gaps = 57/418 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+Y+  + +++ N+             K   A K  +  G+   +        ++S Y
Sbjct: 45  PTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQY 104

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116
           EV    E  F G+   +N   K           D   I  +++ +L      ++KL K  
Sbjct: 105 EVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVA 164

Query: 117 KIGLRINPSVSYSKF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170
            + +R+ P+V  +          A       +  E C+  +     ++ GL  H   +  
Sbjct: 165 NVCVRVEPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMHVGDQVP 224

Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPV--------------- 211
               F+   K +  E          + + I++GGGI    K                   
Sbjct: 225 ESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDDENGDPLKDNMYAGITA 284

Query: 212 KDFCQRLKEFSEKYSVQ--IYLEPGEAIVTNTTTLNTTV----------------LDISE 253
           +DF   +     K+     I +EPG  +  +   L T V                  +  
Sbjct: 285 QDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLTEVSCEKRKTNYDLNGNVECHVEW 344

Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF------GEFH 307
              +      S   H  D+  Y  +A+           + G  C  GD F       EF 
Sbjct: 345 KFVDAGYSVLSDSQHF-DWFFYVYNASRMTAAHDAWVKLAGPLCDGGDYFHMGVKGEEFL 403

Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364
             K   +GD ++F D   Y I  +  +N      + + + +G  + IR   SY D   
Sbjct: 404 LPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMIDKNGETRLIRREDSYEDMVK 461


>gi|85715888|ref|ZP_01046866.1| Orn/DAP/Arg decarboxylase 2 [Nitrobacter sp. Nb-311A]
 gi|85697295|gb|EAQ35175.1| Orn/DAP/Arg decarboxylase 2 [Nitrobacter sp. Nb-311A]
          Length = 380

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 45/358 (12%), Positives = 113/358 (31%), Gaps = 29/358 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   + +N  T          ++  A+K   A  +   L        ++++ E+ 
Sbjct: 21  PCLVVDLDIVRDNYQTFAKAL--PDSRVFYAVKANPAPEVLSLLASLGSCFDTATVAEIE 78

Query: 65  LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +        +  ++      +     A          +  +++ K    A        + 
Sbjct: 79  MALAAGATPDRISFGNTIKKERDIARAYALGIRLFAVDCNAEVEKIARAAPGAKVFCRIL 138

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
                + +++ L+        +  +  D  +       G+ FH   + +    +   L  
Sbjct: 139 --YDCAGAEWPLSRKFGCEPEMAVEVLDVAKRLGLEPVGISFHVGSQQRKLKAWDRALAM 196

Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIYLE 232
           + + F         +  +++GGG                +   + L++       +  +E
Sbjct: 197 VSQVFRDCGERGINLTMVNMGGGFPTRYLKDVPPVVQYGRSIFRALRKHFGNQIPETIIE 256

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPN 284
           PG  +V N   + T V+ IS+   +       ++          + + + Y         
Sbjct: 257 PGRGMVGNAGVIETEVVLISKKSDDDENRWVYLDIGKFGGLAETMDESIRYAIRTPHDGA 316

Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338
                 ++ G +C + D+  E   +     ++IGD++  E    Y     +  FNG  
Sbjct: 317 EMT-PCVLAGPTCDSADVLYEKQPYPLPVTLEIGDKLLIEGTGAYTSTYSSVAFNGFP 373


>gi|325066828|ref|ZP_08125501.1| diaminopimelate decarboxylase [Actinomyces oris K20]
          Length = 486

 Score =  168 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 60/430 (13%), Positives = 126/430 (29%), Gaps = 68/430 (15%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMDG 54
            +P +++D+  L     +               AG +   A K F    +   + +   G
Sbjct: 54  PSPVFVLDEADLRGRAASWAAAMHEEFWPSYGMAGGEAFYAGKAFLTTKVAQWVLEEGMG 113

Query: 55  TTSSSLYEV---MLGHEKFGGETHA--------YNVAYKDCEID-AVLSNCDTIIFNTVS 102
             +SS  E+   +   ++  GE           +       EI  A+  +   ++ +++ 
Sbjct: 114 IDTSSRGELAVSLAALQEVDGEEATTDATRLGLHGNGKTQAEIAVALTHHVGHLVLDSLE 173

Query: 103 QLNKFKDKAQKLHK----------KIGLRINPSVSYSKFILADPNRPFSRLGEK------ 146
           +++      ++L            K+ +R+   V               + G        
Sbjct: 174 EVDLAVRAVRELRASGVYGPEETGKVMVRLTTGVHAGGHEYISTGHEDQKFGLSVHGGAA 233

Query: 147 ---CKDKIESEIKNVNGLMFHNNCENKSFLCFS----AMLKNIEKEFGHFITQIEWISLG 199
                  I +    ++GL  H   +      F      +L    K           + LG
Sbjct: 234 RRAIDAIIAAPELELHGLHSHIGSQILDLAGFREAVGIVLTLRHKVAVDTGHLCPEVDLG 293

Query: 200 GGIHFTDKDYPVKDF---------CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTT 247
           GG                       + ++E  E+       + +EPG A+   TT    T
Sbjct: 294 GGYGIAYTGADPVPPSPAQVARTLAEAVRETCERLGDEVPTVSIEPGRAVAGPTTVTLYT 353

Query: 248 VLDISENI------KNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA------MVCGR 295
           V  +          +  V +D  +  ++   L       +  N  P          V G+
Sbjct: 354 VTGLKRVELGEGASRLYVSIDGGMSDNIRPALYEAAYTALVANRRPDPQAGLVRSRVVGK 413

Query: 296 SCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            C +GD+          + +GD ++      Y  +  + +N    P +       +   +
Sbjct: 414 HCESGDVVVRDVDLPADLAVGDVLAVPATGAYGRSMASNYNLFTRPGVRWVREGESDWVL 473

Query: 355 REFSYNDYYN 364
           R  +  D   
Sbjct: 474 RPETIEDLIR 483


>gi|134058520|emb|CAL00729.1| unnamed protein product [Aspergillus niger]
          Length = 450

 Score =  168 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 55/359 (15%), Positives = 114/359 (31%), Gaps = 29/359 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y+ D  ++        +    + V+   A+KC     +   + +  +G   +S  E+ 
Sbjct: 74  PFYVADMGEVYR--QHLRWKMNLSRVRPFYAVKCNPDPEILRLMAKLGNGFDCASKAEID 131

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +  E         Y    K        +          +    +K KA     ++ LRI 
Sbjct: 132 MALETGVDPSRIIYAQPCKTKSYLRYAAQVGVKQMTFDNADELYKIKANYPDAELYLRIL 191

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S S    +        +  +  +        V G+ FH     +    F   +++  
Sbjct: 192 TDDSNSLCQFSMKFGASLDVARQLLELAHQLELKVVGVSFHVGSGAEDPKAFLKAVQDAR 251

Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
             F        ++  + +GGG      +       + L+ +     +++  EPG   V N
Sbjct: 252 LVFDQAAEIGHELHTLDVGGGFSQDTFEKFAGVLSEALETYFPPN-IRVIAEPGRYYVAN 310

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP------------- 287
             TL   ++   E        + +   ++ D +    S  I+ +  P             
Sbjct: 311 AFTLAANIIARREVRDPEDPANDAYMLYLNDGVYGNFSNIIFDHQHPVAQVLTCASAANS 370

Query: 288 --------YTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGI 337
                    T  + G +C   D+  +       +++GD + FE++  Y       FNG 
Sbjct: 371 PYAATSGGVTYSIWGPTCDGIDVISKRIALPALLEVGDWLYFEEMGAYTKCSATRFNGF 429


>gi|291441781|ref|ZP_06581171.1| decarboxylase [Streptomyces ghanaensis ATCC 14672]
 gi|291344676|gb|EFE71632.1| decarboxylase [Streptomyces ghanaensis ATCC 14672]
          Length = 542

 Score =  168 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 62/400 (15%), Positives = 126/400 (31%), Gaps = 39/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P +++   +L  N+     + +    GV +  + K      +   L++   G    S 
Sbjct: 136 GSPLFVVHGARLAENVRRFQQVPRGRSLGVDVFYSYKTNPVPAVLQRLSRLGVGAEVVSP 195

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKAQKLHKK 117
           YE+ L            YN   K   +   L   D +    N   ++      A +L K+
Sbjct: 196 YELWLALRLGVEPGRIIYNGPGKTPSVVRTLVRSDLLLTHLNHREEIALVARVAAELGKR 255

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
           I + +  + S S            +     ++ +      V GL  H     +       
Sbjct: 256 IDVGLRVATSDSWSGKFGVPIAGGQALAAYEEALAHPSLRVVGLHAHRGVAIEDADTLER 315

Query: 178 ML----KNIEKEFGHFITQIEWISLGGGIHFTD----------------KDYPVKDFCQR 217
            +    +  +         +  + LGG +                    +   ++ +   
Sbjct: 316 FVREVLEFCDALHARLGLDVRLLDLGGSLAVPTVLPLDASPLPLAERVGRRLSIERYLAL 375

Query: 218 LKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP 270
           L E  E +         ++ LEPG A+  NT  L   V  ++               ++ 
Sbjct: 376 LVEQVEDHFRRVGRPAPRVLLEPGRALTGNTQMLLCRVNSLNAPGSGPAHAILDAGENI- 434

Query: 271 DYLLYQESATIYPNTG-----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
            ++L++E   I+           T  + G +C   D   +     P+++GD ++  D   
Sbjct: 435 AHILHREYHEIFHAERWGESRSETYTLDGPTCSPMDCLRQTVALPPLRVGDTLAIMDAGA 494

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y ++  N F     P + V +        R  +Y D    
Sbjct: 495 YLVSFSNSF-CFPQPGVVVLDQGRERLIRRPETYEDMIAR 533


>gi|239933414|ref|ZP_04690367.1| decarboxylase, pyridoxal-dependent [Streptomyces ghanaensis ATCC
           14672]
          Length = 554

 Score =  168 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 62/400 (15%), Positives = 126/400 (31%), Gaps = 39/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P +++   +L  N+     + +    GV +  + K      +   L++   G    S 
Sbjct: 148 GSPLFVVHGARLAENVRRFQQVPRGRSLGVDVFYSYKTNPVPAVLQRLSRLGVGAEVVSP 207

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKAQKLHKK 117
           YE+ L            YN   K   +   L   D +    N   ++      A +L K+
Sbjct: 208 YELWLALRLGVEPGRIIYNGPGKTPSVVRTLVRSDLLLTHLNHREEIALVARVAAELGKR 267

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
           I + +  + S S            +     ++ +      V GL  H     +       
Sbjct: 268 IDVGLRVATSDSWSGKFGVPIAGGQALAAYEEALAHPSLRVVGLHAHRGVAIEDADTLER 327

Query: 178 ML----KNIEKEFGHFITQIEWISLGGGIHFTD----------------KDYPVKDFCQR 217
            +    +  +         +  + LGG +                    +   ++ +   
Sbjct: 328 FVREVLEFCDALHARLGLDVRLLDLGGSLAVPTVLPLDASPLPLAERVGRRLSIERYLAL 387

Query: 218 LKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP 270
           L E  E +         ++ LEPG A+  NT  L   V  ++               ++ 
Sbjct: 388 LVEQVEDHFRRVGRPAPRVLLEPGRALTGNTQMLLCRVNSLNAPGSGPAHAILDAGENI- 446

Query: 271 DYLLYQESATIYPNTG-----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
            ++L++E   I+           T  + G +C   D   +     P+++GD ++  D   
Sbjct: 447 AHILHREYHEIFHAERWGESRSETYTLDGPTCSPMDCLRQTVALPPLRVGDTLAIMDAGA 506

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           Y ++  N F     P + V +        R  +Y D    
Sbjct: 507 YLVSFSNSF-CFPQPGVVVLDQGRERLIRRPETYEDMIAR 545


>gi|167534885|ref|XP_001749117.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163772270|gb|EDQ85923.1| predicted protein [Monosiga brevicollis MX1]
          Length = 570

 Score =  168 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 50/378 (13%), Positives = 104/378 (27%), Gaps = 44/378 (11%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66
           +L+D  +++          +   V+   A+KC     +   L+        +S  E+   
Sbjct: 106 FLLDLAQVVRQQRRFER--QLPNVQPFYAVKCNPDPHILRALDALGVNFDCASKGEMAQV 163

Query: 67  HE-KFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
            +     E   +    K       A       + F+   +L+K          ++ LR+ 
Sbjct: 164 LDMGVAPERIIFANPCKPISHLRAARRWGVQLMTFDNEDELDKIH--VHYPEAQLVLRVL 221

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S +   L         +  +   +      N+ G+ FH          F+  +    
Sbjct: 222 ADDSSAVCRLGLKFGAPLSVVPRLLRRALELDLNLVGVSFHVGSGCTDANAFADAVHRAR 281

Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDYPV----------KDFCQRLKEFSEKYSVQIY 230
           + F         ++ + +GGG    D+                  Q L+           
Sbjct: 282 QVFDMATELGVCLKILDVGGGFPGADETSTNSKDVTFADIAHHLRQALQRHFGHLPDLTI 341

Query: 231 L-EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA---------------------- 267
           + EPG     +  TL   V+            D                           
Sbjct: 342 MAEPGRFYAHSAVTLAVNVIARRGASGRPGEEDHVRYYVSDGVYGSFNCLLFDHASVRGL 401

Query: 268 -HVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
             +       +   +  +   + + V G +C + D          +++GD + + D+  Y
Sbjct: 402 PLLRAADADHDPNHVDHDLKLHASSVWGPTCDSLDCIAREAQLPLLEVGDWLVYHDMGAY 461

Query: 327 NINRKNWFNGINMPTIAV 344
                + FNG   P    
Sbjct: 462 TACAASTFNGFVRPRCYY 479


>gi|294506193|ref|YP_003570251.1| Aspartate kinase [Salinibacter ruber M8]
 gi|294342521|emb|CBH23299.1| Aspartate kinase [Salinibacter ruber M8]
          Length = 870

 Score =  168 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 49/363 (13%), Positives = 103/363 (28%), Gaps = 25/363 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           ++P Y+ D + +    D    +      +   A+K      +   L +   G    S  E
Sbjct: 508 ESPRYVYDPEVVTARSDEVQGL--GPIDQSFYAVKANPHPEVLRLLERRGLGFECVSPGE 565

Query: 63  VMLGHE---KFGGETHAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           +    E           +   +    E          +  + V  L +  D      +++
Sbjct: 566 LDRVFEACPGLDPARVLFQPNFAAPAEYADAFERGVHVTVDNVQPLAEHPDV--FAGEEL 623

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172
            +R++P                S+ G    D       ++     V GL  H        
Sbjct: 624 FVRVDPGQGEGHHRKVRTAGAQSKFGVVPDDLGRLRAAVDQAGATVVGLHAHVGSGITDE 683

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFT-----DKDYPVKDFCQRLKEFSEKYSV 227
             ++ ++  +          +  +++GGG+                     +  +     
Sbjct: 684 STWAGLVDLLA-SLAAEFPAVRALNVGGGLGVPNASGGRPLDLDALDAALGEAAARHPQY 742

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATI----Y 282
            +++EPG  +V     L   V           +  D+ + + +   L       +     
Sbjct: 743 DLWMEPGRYLVAEAGVLLARVTQTKTKDAAAYVGLDTGMNSLLRPALYGAHHEIVNLSRL 802

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
                 TA V G  C  GD+ G      P + GD +       Y  +  N +N     + 
Sbjct: 803 DEPPAMTADVVGPVCETGDVLGHDRRLPPTEPGDTLLVATTGAYGASMSNRYNLREPASE 862

Query: 343 AVK 345
            + 
Sbjct: 863 VML 865


>gi|209884063|ref|YP_002287920.1| ornithine decarboxylase [Oligotropha carboxidovorans OM5]
 gi|209872259|gb|ACI92055.1| ornithine decarboxylase [Oligotropha carboxidovorans OM5]
          Length = 411

 Score =  168 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 47/362 (12%), Positives = 114/362 (31%), Gaps = 30/362 (8%)

Query: 2   IKT-PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           + T P  ++D   + +N  T          ++  A+K   A  +   L        ++++
Sbjct: 48  LDTEPCLVVDLDVVRDNYQTFAKAL--PDSRVFYAVKANPAPEVLTLLASLGSCFDTATV 105

Query: 61  YEVMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+ +        +  ++      +     A          +  +++ K    A      
Sbjct: 106 PEIEMALAAGATPDRISFGNTIKKERDVARAYALGIRLFAVDCTAEVEKIARAAPGAKVF 165

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
             +      + +++ L+        +     D  +       G+ FH   + +    +  
Sbjct: 166 CRIL--YDCAGAEWPLSRKFGCDPEMAVDVLDLAKRLGLEPVGISFHVGSQQRKVKAWDR 223

Query: 178 MLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQ 228
            L    + F         +  +++GGG                +   + L++       +
Sbjct: 224 ALAMASQVFRDCAERGINLTMVNMGGGFPTKYLKDVPPVVQYGRSIFRALRKHFGNQIPE 283

Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESAT 280
             +EPG  +V N   +   V+ IS+   +       ++          + + + YQ    
Sbjct: 284 TIIEPGRGMVGNAGVIEAEVVLISKKSDDDENRWVYLDIGKFGGLAETMGESIRYQIRTR 343

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNG 336
                     ++ G +C + D+  E   +     ++IGD++  E    Y     +  FNG
Sbjct: 344 HDGAEMA-PCVLAGPTCDSADVLYEKAPYPLPVTLEIGDKVLIEGTGAYTSTYSSVAFNG 402

Query: 337 IN 338
           I 
Sbjct: 403 IP 404


>gi|297156524|gb|ADI06236.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces bingchenggensis BCW-1]
          Length = 423

 Score =  168 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 47/397 (11%), Positives = 102/397 (25%), Gaps = 35/397 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D + L   + +         +++  +LK      +   L  +      SSL E
Sbjct: 20  GTPLYVYDGELLAGAVRSLAEALPRP-MEIFYSLKANPNSSVCSLLFAHGAHAEVSSLVE 78

Query: 63  VMLGH-EKFGGETHAY-NVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIG 119
           +          E   +        +I A +      I+  +  +L   +  A++   +  
Sbjct: 79  LRTARTAGARPENIIFLGPGKNAEDIRACVQGRVYAIVCESWEELELIEATARQAGLRQR 138

Query: 120 LRINPSVSYSK-------FILADPNRPFSRLGEKCKDKIESEIKNVN-GLMFHNNCENKS 171
           + +  + S+                          K+++ +    V  G+  +       
Sbjct: 139 VLLRINPSFGGAGSRLAMGGKPRQFGIDEEQVLAGKERLSALTHAVPLGVHVYLGTRILD 198

Query: 172 ----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS----- 222
                   + +L   E+       ++E + +GGG+     +         L+        
Sbjct: 199 AAAIVENTAQVLALAERVAAATGIELEAVDVGGGLGVAYFENEQDLDLDALRTGLTPVVG 258

Query: 223 ----EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                    ++ LE G  +          V  + E+      V      H    +     
Sbjct: 259 DFARRHPRTRLLLESGRFLTARAGAYLVRVQYVKESRDTWFAVTDGGTHHHMAAVGVGSY 318

Query: 279 ATIYPNTG---------PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
           A                     V G  C   D          +  GD ++      Y   
Sbjct: 319 ARRNFPVAAVAGDGAGPERRWHVTGPLCTPEDTLARGVPLPGIAPGDVLAVLRSGAYGPT 378

Query: 330 RKNW-FNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
                F     P   + +    +      + +D    
Sbjct: 379 ASPGLFLSHGFPAEVLVHEGRPLLVRDRDTADDLLRK 415


>gi|154249371|ref|YP_001410196.1| Orn/DAP/Arg decarboxylase 2 [Fervidobacterium nodosum Rt17-B1]
 gi|154153307|gb|ABS60539.1| Orn/DAP/Arg decarboxylase 2 [Fervidobacterium nodosum Rt17-B1]
          Length = 393

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 55/368 (14%), Positives = 117/368 (31%), Gaps = 18/368 (4%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP  ++D   + NN    +        K+  A+K  +   +   L         +S  E
Sbjct: 12  GTPVLVMDLNVIANNYRQLIE--NINNCKVYYAVKSNSHIEIVKFLKDMGSHFDVASRGE 69

Query: 63  VMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +             ++       +    A          +   ++ K    A      + 
Sbjct: 70  IEKLLSIGVEPSRMSFGNTIKKIEDIKFAYEVGIRMFAVDAEMEIEKIALVAPNADIYVR 129

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +  N     + + L            +     + +  N  GL FH   +N +   +   +
Sbjct: 130 ISTNGMEGDADWPLTRKFGTSVNHAIELVRYAKEKGLNPIGLSFHVGSQNYNPENWRTAI 189

Query: 180 KNIEKEFGH---FITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKY---SVQIYL 231
           +     F     F  +++ I+ GGG+          +K   + + E  E+Y    + + +
Sbjct: 190 REASIVFEEAKQFGVEMKMINTGGGMPVRYVRDIPSIKKIAKVINEAVEEYLGNDITVIV 249

Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH--VPDYLLYQESATIYPNTGP-- 287
           EPG ++V N   + + V+  S+      +   +   H         +   T+        
Sbjct: 250 EPGRSMVGNAGVMISRVILRSKKGDENWLYLDAGVFHGLTETIQNIRYRITVDGKEDEEL 309

Query: 288 YTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
              ++ G +C + D+            +GD + F     Y       FNGI  P+I  +N
Sbjct: 310 EKFVLAGPTCDSVDVMYYDAMLPKSTTLGDIVYFFATGAYTTEYGTNFNGIASPSIIFEN 369

Query: 347 VDGTIKAI 354
              + + +
Sbjct: 370 GILSEEIV 377


>gi|154150589|ref|YP_001404207.1| Orn/DAP/Arg decarboxylase 2 [Candidatus Methanoregula boonei 6A8]
 gi|153999141|gb|ABS55564.1| Orn/DAP/Arg decarboxylase 2 [Methanoregula boonei 6A8]
          Length = 397

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 65/366 (17%), Positives = 114/366 (31%), Gaps = 29/366 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ID  K+  N            ++   A+K  +  G+  TL         +S+ E
Sbjct: 33  GTPLFVIDHAKIRENYREFKKNF--PKIQAYFAVKANSNPGIVKTLMDLGASFDVASMPE 90

Query: 63  VMLG-----------HEKFGGETHAYNVAYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDK 110
            M+             + F  +   Y    K  E  + +      + F+ + +L K +  
Sbjct: 91  FMIVHNFIKDMPDKERQDFIWDRIIYANTIKPIETLEELNQYKPLVTFDNIEELKKIRQH 150

Query: 111 AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170
           A +    + LR+  + S  +        P                  V GL FH   +  
Sbjct: 151 APQAGLVLRLRVPNTGSMVELSSKFGADPGEA--VDLIKAAFDLGLVVEGLSFHVGSQCT 208

Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE--- 223
           +F  +   L+               +I  + +GGG                +K  +E   
Sbjct: 209 NFENYVVALQISANIIEETEHRTGRKIRILDIGGGFPVKYNPEVRSIEELAVKLKAEIAR 268

Query: 224 --KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--DYLLYQESA 279
                ++I  EPG  +V N  TL   V+  +          +    H        +    
Sbjct: 269 LFPDDMEILAEPGRFLVANACTLVAKVVGKAYRDGKPCYYINDGVYHTYSGQVFDHCTYP 328

Query: 280 TIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +    GP     V G +C A D          + IGD +   ++  Y+I    +FNG  
Sbjct: 329 VLAFKEGPRQISAVFGPTCDAFDTITLSAELPELDIGDLVYSVNIGAYSIASSTYFNGFP 388

Query: 339 MPTIAV 344
            P    
Sbjct: 389 -PAKVF 393


>gi|78048612|ref|YP_364787.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein
           [Xanthomonas campestris pv. vesicatoria str. 85-10]
 gi|78037042|emb|CAJ24777.1| bifunctional diaminopimelatedecarboxylase/aspartate kinase
           [Xanthomonas campestris pv. vesicatoria str. 85-10]
          Length = 869

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 54/365 (14%), Positives = 110/365 (30%), Gaps = 26/365 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y      +         I      +   A+K  A   +   L Q   G    S  E
Sbjct: 506 GTPRYAYHLPTVRARAHALAQIAAVD--QRYYAIKANAHPAILMALEQAGFGLECVSHGE 563

Query: 63  VMLGHEKFG---GETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           +    +           +  ++    E +A  +   T+  + V  L  + +      + I
Sbjct: 564 LRRVFQTLPELSPRRVLFTPSFAPKAEYEAAFALGVTVTVDNVEALRNWPEV--FRGRTI 621

Query: 119 GLRINPSVSYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNCENKSF 172
            LRI+           +     S+ G      ++  D   +    + G+  H     ++ 
Sbjct: 622 WLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVDVARTLEVTITGVHAHLGSGVETG 681

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-----V 227
             +  M   +          +E I +GGG+             +   +   +        
Sbjct: 682 EHWRMMYDELAGFARRIG-TVETIDIGGGLPIPYSAEDEPFDLEVWAKGLAEVKAVHPGY 740

Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----ATIY 282
           ++ +EPG  +V     L  +V   I ++  + V +D+ +   +   L          +  
Sbjct: 741 RLAIEPGRYLVAEAGVLLASVTQVIEKDGVHRVGLDAGMNTLIRPALYDAWHDIENLSQL 800

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPV-KIGDRISFEDVAGYNINRKNWFNGINMPT 341
                    + G  C + D+FG+          GD +   D   Y     + +N   +P 
Sbjct: 801 DAPAGGMFDIVGPICESSDVFGKRRRLPAATAPGDVVLVADAGAYGYTMASTYNQRELPR 860

Query: 342 IAVKN 346
             V +
Sbjct: 861 EEVID 865


>gi|330803450|ref|XP_003289719.1| hypothetical protein DICPUDRAFT_98470 [Dictyostelium purpureum]
 gi|325080187|gb|EGC33753.1| hypothetical protein DICPUDRAFT_98470 [Dictyostelium purpureum]
          Length = 453

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 59/370 (15%), Positives = 109/370 (29%), Gaps = 32/370 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++       + +    V    A+KC    G+   L+        +S  E+  
Sbjct: 79  FFVADIAVIIRQY--LKWKKNLPNVTPFYAVKCNPTIGILKVLDALGTSYDCASRTEIET 136

Query: 66  GHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                       Y    K       A   N   + F+ VS+L K +    +    + +  
Sbjct: 137 VLNLGVDPTRIIYANPCKQISAIKFARAHNVKLMTFDNVSELEKIEKFFPEAELVLRIAP 196

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS---FLCFSAML 179
           + S S  +F                 +  +     V G+ FH          +     M+
Sbjct: 197 DDSKSLMRFGTKFGVHIDDCY--DLLEMAKEMNLKVVGVSFHVGSGCFDSIAYDSALKMV 254

Query: 180 KNIEKEFGHFITQIEWISLGGGIH--FTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI 237
           K++ +        +  + +GGG      +         +         +V+I  EPG   
Sbjct: 255 KSVFEMAKKLDMTLTLVDVGGGFSGSNDEMFEKFTTVIREKTAELFDSNVRIIAEPGRYF 314

Query: 238 VTNTTTLNTTVLDISENIKNLVIVDSSVE-AHVPDYLLY---------------QESATI 281
              + TL  TV+      +            ++  Y  Y                   T 
Sbjct: 315 AAQSHTLAVTVISKRIIKQEDNRQHPRRTSNNMRQYNYYLADGVYGSFNNIQFDHAKPTP 374

Query: 282 Y----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                 N  P    + G +C + D+         +KIGD + F D+  Y     + FNG 
Sbjct: 375 MLLKPSNKQPTPCTLFGPTCDSIDVIARDTQIPELKIGDWLYFPDMGAYTTASASSFNGF 434

Query: 338 NMPTIAVKNV 347
             P +   N 
Sbjct: 435 CPPPVYYYNS 444


>gi|318060098|ref|ZP_07978821.1| putative diaminopimelate decarboxylase [Streptomyces sp. SA3_actG]
 gi|318076257|ref|ZP_07983589.1| putative diaminopimelate decarboxylase [Streptomyces sp. SA3_actF]
          Length = 439

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 59/397 (14%), Positives = 119/397 (29%), Gaps = 36/397 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+ ++            +AG  +  A K F    +   L++   G    S  E
Sbjct: 41  GTPLYVLDEDQVRARARAYRAAFPDAG--VHYAAKAFLCRALVRWLDEEDIGLDVCSAGE 98

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK-LHKKI 118
           + L     F  +    +   K     A         ++ + V ++ +          +++
Sbjct: 99  LELAVAAGFPADRVLLHGNAKSPRDLASALRLGVGRVVLDGVGEITRLAALVPPGERQRV 158

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCEN 169
            +R+ P +S              + G    D          + +    + GL  H   + 
Sbjct: 159 LVRVVPGISAGHHDKVRTGDEDQKFGLSLTDGSAQHAVARVLATPRLELTGLHCHIGSQI 218

Query: 170 ----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEF 221
                       +L    +    +   +  I LGGG     +       + D  +RL+  
Sbjct: 219 AEVKPYLAAQRRLLGLRARIAETYGVVLPEIDLGGGHAVAQRPGERGIDLTDLARRLRAE 278

Query: 222 SEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE-AHVPDYL 273
             +          ++ LEPG A+V         VL +      + +        +    L
Sbjct: 279 LAESCRAAGLPEPRLLLEPGRALVARAGVAVYRVLAVKRTAHRVFVAVDGGMGDNPRPAL 338

Query: 274 LYQESATIYP----NTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNI 328
                            P+   + GR C AGD+          ++ GD ++      Y +
Sbjct: 339 YGAPCVPRLVGRVSTAAPHRVDLVGRHCEAGDVLAPAVPLPADIRPGDLVATPVAGAYQL 398

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           +  + +N    P +           IR    +D +  
Sbjct: 399 SMASAYNLHGRPPLIATREGTPRLLIRREEPDDLWLR 435


>gi|157117130|ref|XP_001652949.1| ornithine decarboxylase [Aedes aegypti]
 gi|108876150|gb|EAT40375.1| ornithine decarboxylase [Aedes aegypti]
          Length = 433

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 65/370 (17%), Positives = 116/370 (31%), Gaps = 24/370 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y++D   ++      +   K   V    A+KC     +  TL         +S  E+ 
Sbjct: 37  PFYVMDIDDIVRKHQAWIE--KMPRVVPHYAVKCNDTEVVCATLATLGASFDCASKGEIA 94

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                    +   +    K          +N  T+ F++  +L+K +         + +R
Sbjct: 95  KILALGVSPDRIIFANPMKPSSHLRYASANNVKTMTFDSEIELHKIRKFCPDAKLVLRIR 154

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
                +           P        +    S   +V G+ FH       F  +   +  
Sbjct: 155 CEAEKATCPLGKKFGCDPVDEAPSLIR-IARSMNLDVIGISFHVGSGCSDFPIYYKAISI 213

Query: 182 IEKEFG---HFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
               F        +   + +GGG   +     D         L +F    SV+I  EPG 
Sbjct: 214 ARDLFDYAKQLGYEFNLLDIGGGFPGSHGTSIDEVALIINTALDKFFADKSVRIISEPGR 273

Query: 236 AIVTNTTTLNTTVLDIS------------ENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             V +  TL T V                        V +S    + D+   Q       
Sbjct: 274 YYVASAFTLLTNVQSKRACLDPATGTIDRMMYYLNDGVYASFNCILFDHQYPQPRLIGQQ 333

Query: 284 NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343
           +   Y + + G SC A D   E      ++I D + F+++  Y I   + FNG  +P + 
Sbjct: 334 SGKTYKSTIWGPSCDALDQVVETINLPELQIEDWVVFDNMGAYTIPIASPFNGFPLPKVF 393

Query: 344 VKNVDGTIKA 353
                 T++ 
Sbjct: 394 CYISKNTLEM 403


>gi|167549634|ref|ZP_02343393.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205325203|gb|EDZ13042.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
          Length = 465

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 76/418 (18%), Positives = 136/418 (32%), Gaps = 57/418 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+Y+  + +++ N+             K   A K  +  G+   +        ++S Y
Sbjct: 45  PTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQY 104

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116
           EV    E  F G+   +N   K           D   I  +++ +L      ++KL K  
Sbjct: 105 EVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVA 164

Query: 117 KIGLRINPSVSYSKF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170
            + +R+ P+V  +          A       +  E C+  +     ++ GL  H   +  
Sbjct: 165 NVCVRVEPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMHVGDQVP 224

Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPV--------------- 211
               F+   K +  E          + + I++GGGI    K                   
Sbjct: 225 ESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDDENGDPLKDNMYAGITA 284

Query: 212 KDFCQRLKEFSEKYSVQ--IYLEPGEAIVTNTTTLNTTV----------------LDISE 253
           +DF   +     K+     I +EPG  +  +   + T V                  +  
Sbjct: 285 QDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVILTEVSCEKRKTNYDLNGNVECHVEW 344

Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF------GEFH 307
              +      S   H  D+  Y  +A+           + G  C  GD F       EF 
Sbjct: 345 KFVDAGYSVLSDSQHF-DWFFYVYNASRMTVAHDAWIKLAGPLCDGGDYFHMGVKGEEFL 403

Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364
             K   +GD ++F D   Y I  +  +N      + + + +G  + IR   SY D   
Sbjct: 404 LPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMIDKNGETRLIRREDSYEDMVK 461


>gi|73979725|ref|XP_848547.1| PREDICTED: similar to Ornithine decarboxylase (ODC) isoform 2
           [Canis familiaris]
 gi|73979741|ref|XP_856711.1| PREDICTED: similar to Ornithine decarboxylase (ODC) isoform 9
           [Canis familiaris]
          Length = 461

 Score =  167 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 65/383 (16%), Positives = 116/383 (30%), Gaps = 41/383 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       +++    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 40  FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSRTIVKTLAAIGTGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        SN    +    S++   K        K+ LRI  
Sbjct: 98  VQSLGVPPERIIYANPCKQVSQIKYASNNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++      +V G+ FH          F   + +   
Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERARELNIDVIGVSFHVGSGCTDPETFVQAISDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     V++  EPG 
Sbjct: 218 VFDMGAEVGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPADSGVRVIAEPGR 277

Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270
             V +  TL   ++                          +++ +           AHV 
Sbjct: 278 YYVASAFTLAVNIIAKKLVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVK 337

Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
             L  +           Y+  + G +C   D   E      + +GD + FE++  Y +  
Sbjct: 338 PLLQKRPKPD----EKYYSTSIWGPTCDGLDRIVERCDLPEIHVGDWMLFENMGAYTVAA 393

Query: 331 KNWFNGINMPTIAVKNVDGTIKA 353
            + FNG   PTI       T + 
Sbjct: 394 ASTFNGFQRPTIYYVMSGPTWQL 416


>gi|168229736|ref|ZP_02654794.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|194470577|ref|ZP_03076561.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194456941|gb|EDX45780.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|205335840|gb|EDZ22604.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
          Length = 465

 Score =  167 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 77/418 (18%), Positives = 136/418 (32%), Gaps = 57/418 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+Y+  + +++ N+             K   A K  +  G+   +        ++S Y
Sbjct: 45  PTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQY 104

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116
           EV    E  F G+   +N   K           D   I  +++ +L      ++KL K  
Sbjct: 105 EVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVA 164

Query: 117 KIGLRINPSVSYSKF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170
            + +R+ P+V  +          A       +  E C+  +     ++ GL  H   +  
Sbjct: 165 NVCVRVEPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMHVGDQVP 224

Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPV--------------- 211
               F+   K +  E          + + I++GGGI    K                   
Sbjct: 225 ESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDDENGDPLKDNMYAGITA 284

Query: 212 KDFCQRLKEFSEKYSVQ--IYLEPGEAIVTNTTTLNTTV----------------LDISE 253
           +DF   +     K+     I +EPG  +  +   L T V                  +  
Sbjct: 285 QDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLTEVSCEKRKTNYDLNGNVECHVEW 344

Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF------GEFH 307
              +      S   H  D+  Y  +A+           + G  C  GD F       EF 
Sbjct: 345 KFVDAGYSVLSDSQHF-DWFFYVYNASRMTAAHDTWIKLAGPLCDGGDYFHMGVKGEEFL 403

Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364
             K   +GD ++F D   Y I  +  +N      + + + +G  + IR   SY D   
Sbjct: 404 LPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMIDKNGETRLIRREDSYEDMVK 461


>gi|161502495|ref|YP_001569607.1| hypothetical protein SARI_00539 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160863842|gb|ABX20465.1| hypothetical protein SARI_00539 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 465

 Score =  167 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 77/418 (18%), Positives = 136/418 (32%), Gaps = 57/418 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+Y+  + +++ N+             K   A K  +  G+   +        ++S Y
Sbjct: 45  PTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQY 104

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116
           EV    E  F G+   +N   K           D   I  +++ +L      ++KL K  
Sbjct: 105 EVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVA 164

Query: 117 KIGLRINPSVSYSKF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170
            + +R+ P+V  +          A       +  E C+  +     ++ GL  H   +  
Sbjct: 165 NVCVRVEPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMHVGDQVP 224

Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPV--------------- 211
               F+   K +  E          + + I++GGGI    K                   
Sbjct: 225 ESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDDENGDPLKDNMYAGITA 284

Query: 212 KDFCQRLKEFSEKYSVQ--IYLEPGEAIVTNTTTLNTTV----------------LDISE 253
           +DF   +     K+     I +EPG  +  +   L T V                  +  
Sbjct: 285 QDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLTEVSCEKRKTNYDLNGNVECHVEW 344

Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF------GEFH 307
              +      S   H  D+  Y  +A+           + G  C  GD F       EF 
Sbjct: 345 KFVDAGYSVLSDSQHF-DWFFYVYNASRITAAHDAWIKLAGPLCDGGDYFHMGVKGEEFL 403

Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364
             K   +GD ++F D   Y I  +  +N      + + + +G  + IR   SY D   
Sbjct: 404 LPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMIDKNGETRLIRREDSYEDMVK 461


>gi|238064589|ref|ZP_04609298.1| orn/DAP/Arg decarboxylase 2 [Micromonospora sp. ATCC 39149]
 gi|237886400|gb|EEP75228.1| orn/DAP/Arg decarboxylase 2 [Micromonospora sp. ATCC 39149]
          Length = 417

 Score =  167 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 53/397 (13%), Positives = 107/397 (26%), Gaps = 35/397 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   L         +     V +L +LK      +   L     G   SSL E
Sbjct: 6   GTPLFVYDADVLRERYRQLREVLH-PEVGILFSLKANPNVSICAVLRSLGAGAEVSSLAE 64

Query: 63  VMLG-HEKFGGET-HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIG 119
           +++        E            EIDA L+     I+  + S+L +    A + +    
Sbjct: 65  LLIAGRAGVAPEDTIFLGPGKSIQEIDACLATGVHAIVCESWSELTEIDALAARRNIVAR 124

Query: 120 LRINPSVS-YSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK- 170
           + +  + S   K      +    + G   +  +E+           + G+  +       
Sbjct: 125 VVLRINPSFTVKGSRLTMSGKPRQFGIDEEQALEAAARVAGLGNVRLTGVHVYMGTRILA 184

Query: 171 ---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFS- 222
                   + +L   E+       ++E + +GGG+        +D  ++     +     
Sbjct: 185 EEVVAENTTRILDLAERVAERLDFELETVDVGGGLGVAYFDGERDLNLRRLADLVNPAFA 244

Query: 223 ----EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                    +++ E G  +   + T    V  + E++     V      H    +     
Sbjct: 245 AFRARHPRTRLFTELGRFLTAESGTYLVRVRQVKESMGERFAVTDGGTHHHMAAVGIGSF 304

Query: 279 ATIYPN---------TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
                                 V G  C   D          ++ GD +       Y   
Sbjct: 305 VKRDFPIRLLGREATEPAQNWRVTGLLCTPNDTLSTHTPLPSLRPGDLLGVLRSGAYGPT 364

Query: 330 RKN-WFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
                F     P   + +              D  + 
Sbjct: 365 ASPVLFLSHGHPAEVLVDAGRPYLIRDRDRPADIVDR 401


>gi|194220974|ref|XP_001502373.2| PREDICTED: similar to Ornithine decarboxylase (ODC) [Equus
           caballus]
          Length = 461

 Score =  167 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 64/383 (16%), Positives = 119/383 (31%), Gaps = 41/383 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       +++    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 40  FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSRTIVKTLAAIGTGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        +N    +    S++   K        K+ LRI  
Sbjct: 98  VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++ +    +V G+ FH          F   + +   
Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQAISDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     V++  EPG 
Sbjct: 218 VFDMGAEIGFNMYLLDIGGGFPGSEDVKLKFEEVTSVINPALDKYFPSDSGVRVIAEPGR 277

Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270
             V +  TL   ++                          +++ +           AHV 
Sbjct: 278 YYVASAFTLAVNIIAKKLVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVK 337

Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
             L  +           Y++ + G +C   D   E      +++GD + FE++  Y +  
Sbjct: 338 PLLQKRPKPD----EKYYSSSIWGPTCDGLDRIVERCNLPEMQVGDWMLFENMGAYTVAA 393

Query: 331 KNWFNGINMPTIAVKNVDGTIKA 353
            + FNG   PTI       T + 
Sbjct: 394 ASTFNGFQRPTIYYVMSGPTWQL 416


>gi|320094245|ref|ZP_08026047.1| diaminopimelate decarboxylase [Actinomyces sp. oral taxon 178 str.
           F0338]
 gi|319978823|gb|EFW10364.1| diaminopimelate decarboxylase [Actinomyces sp. oral taxon 178 str.
           F0338]
          Length = 473

 Score =  167 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 60/412 (14%), Positives = 113/412 (27%), Gaps = 49/412 (11%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMD 53
           + TP +++D   L       +             AG     A K F +  +   +     
Sbjct: 55  LGTPLFVVDLADLAARARVWVSAMAEEFWDGYGMAGGDAFYASKAFLSAEVARLVAAEGM 114

Query: 54  GTTSSSLYEVMLG-HEKFGGETHA-YNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDK 110
           G  ++SL E+ L             +     D EI+ A+ +    I  ++  ++   +  
Sbjct: 115 GIDTASLGELTLALRAGVDPGRIGLHGNNKGDAEIELALQAGIHRIFIDSAHEVGAVERI 174

Query: 111 AQKLHKKIGLRIN--PSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVN 159
           A +L  +  + +     V               + G    D           E+      
Sbjct: 175 AARLGVEAPVMVRLKSGVHAGGNEYIATAHEDQKFGVSVADGQALDVVRRIREAPHLRFL 234

Query: 160 GLMFHNNCENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF- 214
           GL  H   +             ++    +       +   I LGGG+             
Sbjct: 235 GLHSHIGSQIFGTAAFEEAARVVVDFAARIRDELGVETGAIDLGGGVGIAYTGQDPVPDS 294

Query: 215 ----CQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI------KN 257
                + L     +           +  EPG ++V        TV  + +        + 
Sbjct: 295 PAAVARALAGVVRERCESLRLPVPHVSTEPGRSVVGPAALTLYTVGVVKDVSLPGGGVRR 354

Query: 258 LVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PV 312
            V VD  +  ++   L         A      G     V G+ C +GDI          V
Sbjct: 355 YVAVDGGMSDNIRPALYGASYTAALAGREGAEGLARCRVVGKHCESGDIVVRDVDLPADV 414

Query: 313 KIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             GD I+      Y  +  + +N +  P +           +R    +    
Sbjct: 415 GAGDVIAVPATGAYGYSMASNYNMLTKPGVVGVGAGEPHWLVRPQGLDHLLA 466


>gi|16761285|ref|NP_456902.1| amino acid decarboxylase [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29141019|ref|NP_804361.1| amino acid decarboxylase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56412743|ref|YP_149818.1| amino acid decarboxylase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|168242485|ref|ZP_02667417.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|168817903|ref|ZP_02829903.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194445823|ref|YP_002041624.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194447678|ref|YP_002046416.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|197247933|ref|YP_002147321.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197361677|ref|YP_002141313.1| amino acid decarboxylase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|204929227|ref|ZP_03220370.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|213161327|ref|ZP_03347037.1| putative amino acid decarboxylase [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213426984|ref|ZP_03359734.1| putative amino acid decarboxylase [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213621623|ref|ZP_03374406.1| putative amino acid decarboxylase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213852682|ref|ZP_03382214.1| putative amino acid decarboxylase [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|238912361|ref|ZP_04656198.1| putative amino acid decarboxylase [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|289827480|ref|ZP_06546092.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|25512762|pir||AF0801 probable amino acid decarboxylase STY2590 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16503584|emb|CAD07592.1| putative amino acid decarboxylase [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29136644|gb|AAO68210.1| putative amino acid decarboxylase [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56127000|gb|AAV76506.1| putative amino acid decarboxylase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|194404486|gb|ACF64708.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194405982|gb|ACF66201.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|197093153|emb|CAR58597.1| putative amino acid decarboxylase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|197211636|gb|ACH49033.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|204321771|gb|EDZ06970.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205338587|gb|EDZ25351.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205344959|gb|EDZ31723.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|320086795|emb|CBY96567.1| putative amino acid decarboxylase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|322617105|gb|EFY14011.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322617589|gb|EFY14488.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322624781|gb|EFY21610.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322630331|gb|EFY27101.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322634511|gb|EFY31244.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322639222|gb|EFY35914.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322640085|gb|EFY36752.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322645695|gb|EFY42219.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322652059|gb|EFY48422.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322656231|gb|EFY52528.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322659383|gb|EFY55630.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322665843|gb|EFY62026.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322669918|gb|EFY66059.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322673903|gb|EFY70000.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322678662|gb|EFY74718.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322683543|gb|EFY79557.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322687618|gb|EFY83588.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323193547|gb|EFZ78752.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323198454|gb|EFZ83556.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323204566|gb|EFZ89569.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323208496|gb|EFZ93435.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323213633|gb|EFZ98422.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323218331|gb|EGA03041.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323222914|gb|EGA07263.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323224511|gb|EGA08793.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323232326|gb|EGA16429.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323235640|gb|EGA19724.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323241200|gb|EGA25236.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323244942|gb|EGA28944.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323250061|gb|EGA33955.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323253845|gb|EGA37670.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323254982|gb|EGA38773.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323259831|gb|EGA43463.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323264148|gb|EGA47655.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323270846|gb|EGA54284.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 465

 Score =  167 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 77/418 (18%), Positives = 136/418 (32%), Gaps = 57/418 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+Y+  + +++ N+             K   A K  +  G+   +        ++S Y
Sbjct: 45  PTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQY 104

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116
           EV    E  F G+   +N   K           D   I  +++ +L      ++KL K  
Sbjct: 105 EVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVA 164

Query: 117 KIGLRINPSVSYSKF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170
            + +R+ P+V  +          A       +  E C+  +     ++ GL  H   +  
Sbjct: 165 NVCVRVEPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMHVGDQVP 224

Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPV--------------- 211
               F+   K +  E          + + I++GGGI    K                   
Sbjct: 225 ESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDDENGDPLKDNMYAGITA 284

Query: 212 KDFCQRLKEFSEKYSVQ--IYLEPGEAIVTNTTTLNTTV----------------LDISE 253
           +DF   +     K+     I +EPG  +  +   L T V                  +  
Sbjct: 285 QDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLTEVSCEKRKTNYDLNGNVECHVEW 344

Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF------GEFH 307
              +      S   H  D+  Y  +A+           + G  C  GD F       EF 
Sbjct: 345 KFVDAGYSVLSDSQHF-DWFFYVYNASRMTAAHDAWIKLAGPLCDGGDYFHMGVKGEEFL 403

Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364
             K   +GD ++F D   Y I  +  +N      + + + +G  + IR   SY D   
Sbjct: 404 LPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMIDKNGETRLIRREDSYEDMVK 461


>gi|168237385|ref|ZP_02662443.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|194735492|ref|YP_002115431.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|194710994|gb|ACF90215.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197289617|gb|EDY28980.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
          Length = 465

 Score =  167 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 76/418 (18%), Positives = 136/418 (32%), Gaps = 57/418 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+Y+  + +++ N+             K   A K  +  G+   +        ++S Y
Sbjct: 45  PTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQY 104

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116
           EV    E  F G+   +N   K           D   I  +++ +L      +++L K  
Sbjct: 105 EVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRRLKKVA 164

Query: 117 KIGLRINPSVSYSKF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170
            + +R+ P+V  +          A       +  E C+  +     ++ GL  H   +  
Sbjct: 165 NVCVRVEPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMHVGDQVP 224

Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPV--------------- 211
               F+   K +  E          + + I++GGGI    K                   
Sbjct: 225 ESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDDENGDPLKDNMYAGITA 284

Query: 212 KDFCQRLKEFSEKYSVQ--IYLEPGEAIVTNTTTLNTTV----------------LDISE 253
           +DF   +     K+     I +EPG  +  +   L T V                  +  
Sbjct: 285 QDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLTEVSCEKRKTNYDLNGNVECHVEW 344

Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF------GEFH 307
              +      S   H  D+  Y  +A+           + G  C  GD F       EF 
Sbjct: 345 KFVDAGYSVLSDSQHF-DWFFYVYNASRMTAAHDAWIKLAGPLCDGGDYFHMGVKGEEFL 403

Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364
             K   +GD ++F D   Y I  +  +N      + + + +G  + IR   SY D   
Sbjct: 404 LPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMIDKNGETRLIRREDSYEDMVK 461


>gi|92118880|ref|YP_578609.1| ornithine decarboxylase [Nitrobacter hamburgensis X14]
 gi|91801774|gb|ABE64149.1| ornithine decarboxylase [Nitrobacter hamburgensis X14]
          Length = 380

 Score =  167 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 47/358 (13%), Positives = 112/358 (31%), Gaps = 29/358 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   + +N  T          ++  A+K   A  +   L        ++++ E+ 
Sbjct: 21  PCLVVDLDVVRDNYQTFAKAL--PDSRVFYAVKANPAPEVLSLLASLGSCFDTATVAEIE 78

Query: 65  LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +        +  ++      +     A          +  +++ K    A        + 
Sbjct: 79  MALAAGATPDRVSFGNTIKKERDIARAYALGIRLFAVDCTAEVEKIARAAPGAKVFCRIL 138

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
                + +++ L+        +     D  +       G+ FH   + +    +   L  
Sbjct: 139 --YDCAGAEWPLSRKFGCDPEMAVDVLDLAKRLSLEPVGISFHVGSQQRKVKAWDRALAM 196

Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIYLE 232
           + + F         +  +++GGG                +   + L++       +  +E
Sbjct: 197 VSQVFRDCAERGINLTMVNMGGGFPTKYLRDVPPVVQYGRSIFRALRKHFGNQIPETIIE 256

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPN 284
           PG  +V N   + T V+ IS    +             S +   + + + Y         
Sbjct: 257 PGRGMVGNAGVIETEVVLISRKSDDDENRWVYLDIGKFSGLAETMDESIRYAIRTPHDGA 316

Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338
                 ++ G +C + D+  E   +     ++IGD++  E    Y     +  FNGI 
Sbjct: 317 EMT-PCVLAGPTCDSADVLYEKQPYPLPVTLEIGDKLLIEGTGAYTSTYSSVAFNGIP 373


>gi|213401143|ref|XP_002171344.1| ornithine decarboxylase [Schizosaccharomyces japonicus yFS275]
 gi|211999391|gb|EEB05051.1| ornithine decarboxylase [Schizosaccharomyces japonicus yFS275]
          Length = 431

 Score =  167 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 59/367 (16%), Positives = 112/367 (30%), Gaps = 30/367 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++   L           V+   A+KC     +   L ++  G   +S  E+  
Sbjct: 69  FFVADLAEVYRQLVRWHTNLPR--VQPFYAVKCNPDPRVLALLVKFGTGFDCASKGELQQ 126

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K         N +       +    +K K    + ++ LRI+ 
Sbjct: 127 ILSLGVSPERIVYANPCKAINYIRYARNNNVDFMTFDNTEELYKCKQHHPNARLLLRIST 186

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
           +   S   L+          E+     ++   NV G+ FH    N     F   +     
Sbjct: 187 NDENSICRLSLKFGAPMSETEELLRVAKTLDLNVVGVSFHVGSGNLDPASFIDAICRSRV 246

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV---QIYLEPGEAIV 238
            F     +      + +GGG          +     L+E  + +     +I  EPG   V
Sbjct: 247 VFDQGERYGFHFNTLDIGGGF----MSDSFEQTAAILREQLDTHFPANVRIIAEPGRFFV 302

Query: 239 TNTTTLNTTVLDISENIKNLVIVD-----------SSVEAHVPDYLLYQESATIYPNT-- 285
               TL   V+      +   ++              +  H        + A        
Sbjct: 303 ATAFTLAVNVVAKRRIPEENKVMYYVNDGVYGSLNCILFDHQHPVARVLKHAGRMCYNQY 362

Query: 286 ---GPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
              G +   + G +C + D+          +++GD I F+D   Y +   + FNG     
Sbjct: 363 VGTGDHVCSIWGPTCDSLDVIASDARLPFELEVGDWIYFDDAGAYTVAAASSFNGFQTSK 422

Query: 342 IAVKNVD 348
           +   + D
Sbjct: 423 VEYVSTD 429


>gi|168261617|ref|ZP_02683590.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|197265590|ref|ZP_03165664.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197243845|gb|EDY26465.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|205349442|gb|EDZ36073.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
          Length = 465

 Score =  167 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 77/418 (18%), Positives = 136/418 (32%), Gaps = 57/418 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+Y+  + +++ N+             K   A K  +  G+   +        ++S Y
Sbjct: 45  PTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQY 104

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116
           EV    E  F G+   +N   K           D   I  +++ +L      ++KL K  
Sbjct: 105 EVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVA 164

Query: 117 KIGLRINPSVSYSKF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170
            + +R+ P+V  +          A       +  E C+  +     ++ GL  H   +  
Sbjct: 165 NVCVRVEPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMHVGDQVP 224

Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPV--------------- 211
               F+   K +  E          + + I++GGGI    K                   
Sbjct: 225 ESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDDENGDPLKDNMYAGITA 284

Query: 212 KDFCQRLKEFSEKYSVQ--IYLEPGEAIVTNTTTLNTTV----------------LDISE 253
           +DF   +     K+     I +EPG  +  +   L T V                  +  
Sbjct: 285 QDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLTEVSCEKRKTNYDLNGNVECHVEW 344

Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF------GEFH 307
              +      S   H  D+  Y  +A+           + G  C  GD F       EF 
Sbjct: 345 KFVDAGYSVLSDSQHF-DWFFYVYNASRMTAAHDAWIKLAGPLCDGGDYFHMGVKGEEFL 403

Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364
             K   +GD ++F D   Y I  +  +N      + + + +G  + IR   SY D   
Sbjct: 404 LPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMIDKNGETRLIRREDSYEDMVK 461


>gi|200386842|ref|ZP_03213454.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|199603940|gb|EDZ02485.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
          Length = 465

 Score =  167 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 76/418 (18%), Positives = 136/418 (32%), Gaps = 57/418 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+Y+  + +++ N+             K   A K  +  G+   +        ++S Y
Sbjct: 45  PTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQY 104

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116
           EV    E  F G+   +N   K           D   I  +++ +L      ++KL K  
Sbjct: 105 EVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVA 164

Query: 117 KIGLRINPSVSYSKF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170
            + +R+ P+V  +          A       +  E C+  +     ++ GL  H   +  
Sbjct: 165 NVCVRVEPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMHVGDQVP 224

Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPV--------------- 211
               F+   K +  E          + + I++GGGI    K                   
Sbjct: 225 ESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDDENGDPLKDNMYAGITA 284

Query: 212 KDFCQRLKEFSEKYSVQ--IYLEPGEAIVTNTTTLNTTV----------------LDISE 253
           +DF   +     K+     I +EPG  +  +   L T V                  +  
Sbjct: 285 QDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLTEVSCEKRKTNYDLNGNVECHVEW 344

Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF------GEFH 307
              +      S   H  D+  Y  +A+           + G  C  GD F       EF 
Sbjct: 345 KFVDAGYSVLSDSQHF-DWFFYVYNASRMTAVHDAWIKLAGPLCDGGDYFHMGVKGEEFL 403

Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364
             +   +GD ++F D   Y I  +  +N      + + + +G  + IR   SY D   
Sbjct: 404 LPRETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMIDKNGETRLIRREDSYEDMVK 461


>gi|157363014|ref|YP_001469781.1| ornithine decarboxylase [Thermotoga lettingae TMO]
 gi|157313618|gb|ABV32717.1| Ornithine decarboxylase [Thermotoga lettingae TMO]
          Length = 376

 Score =  167 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 56/367 (15%), Positives = 124/367 (33%), Gaps = 29/367 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+ +ID   +  N             K+  A+K  +   + + L         +S+ E
Sbjct: 15  ETPFLIIDLDIIEENYRKLAAAI--PDCKIFYAIKANSHPRILERLRDLGSNFDVASIGE 72

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +          +   +    K  +   +A          ++  +L+K  + A      I 
Sbjct: 73  IKKLMNLGVTADRMIFANPIKREKDIAEAYDLGVYLFAADSTMELDKIAENAPGSQVVIR 132

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKI-ESEIKNVN--GLMFHNNCENKSFLCFS 176
           + +      +       +R F        D I  ++   +   G+ FH   +N     +S
Sbjct: 133 VAV-----ENTHSDWPLSRKFGVDLLVAVDLIAYAQKLRLTPVGVSFHVGSQNYDPHSWS 187

Query: 177 AMLKNIEKEF----GHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYSV--- 227
             ++ + K F     +F   +  + +GGGI          V++  + + +   ++     
Sbjct: 188 NAIERVAKIFYWAERNFGIHLRVLDIGGGIPIKHVKPIPTVEEIGEIVLQSISEHLYGVR 247

Query: 228 --QIYLEPGEAIVTNTTTLNTTVLDISEN--IKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             QI+ EPG ++V N+  L + VL   +    + + I        +     ++    +  
Sbjct: 248 NLQIFAEPGRSMVGNSGILVSKVLLRCQRGSEEWVYIDAGVFHGLMETIENFRYEIEVDG 307

Query: 284 NTGPY--TAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                    ++ G +C + D   +       + + D + F +   Y +     FNGI  P
Sbjct: 308 KESEQKIPFVLAGPTCDSVDKIYDDALLSYNITLDDIVYFINAGAYTVEYGTNFNGIPSP 367

Query: 341 TIAVKNV 347
            +     
Sbjct: 368 KVYFLQD 374


>gi|268325449|emb|CBH39037.1| diaminopimelate decarboxylase [uncultured archaeon]
 gi|268325761|emb|CBH39349.1| diaminopimelate decarboxylase [uncultured archaeon]
          Length = 478

 Score =  167 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 63/442 (14%), Positives = 130/442 (29%), Gaps = 79/442 (17%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++ ++ + +N                +  A+K    + +   L +   G   +S 
Sbjct: 28  GTPLYVLFEELIESNYKQYQTALNDVYKNHLICYAVKANTTFAIIKLLGELGAGADVASE 87

Query: 61  YEVMLGH-EKFGGETH-AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           YE+              A      +  ++  + N   I  +   +L+   + A++L    
Sbjct: 88  YELQFTLDAGIPPAKIRANGNCKSEQYLEECIKNGILINVDPEEELDILNETARELGMAA 147

Query: 119 GLRINPSVSYSKFIL---ADPNRPFSRLGEKCKDKIESEIKNV-------NGLMFHNNCE 168
            + +  +    K I       +  +S+ G   +   E+  K +       NGLM H   +
Sbjct: 148 KINLRLAGFPLKHITSPAITTSSEWSKFGIPVQRAKEALQKVLRLDHLIPNGLMVHLGSQ 207

Query: 169 NKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD--------------KDYPV 211
                 +  +L     +  +       ++ I++GGG   +                    
Sbjct: 208 ITDMGAYHLVLNELIKLAADADKIGFDVKEINIGGGCGISYLGKEEWNGIKSKIADTNDA 267

Query: 212 KDFCQRLKEFSEK--------------------------------------YSVQIYLEP 233
               + +     K                                         ++ +EP
Sbjct: 268 TWANELIGYNCNKEWVSEELYCPFTPDTFIQKLFNETYTANRTFKERLEAIELPKVVVEP 327

Query: 234 GEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAH-----VPDYLLYQESATIYPNTG 286
           G ++V N       V  +      +N+V VD+ V  H     VP+ L   E A       
Sbjct: 328 GRSLVGNAQVTLVRVCHVGTTPSGQNIVHVDAGVNHHSQNIIVPEQLHRMEIANDTDTAA 387

Query: 287 PYTAMVCGRSCLAGDIFG--EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344
            +   + G  C  GD+    +       + GD I   D   Y+    +  N    P   +
Sbjct: 388 GFETFIAGNLCYTGDLLCRIKNTLNSKPERGDYIIIYDTGAYSDFFASNTNSFPRPAKVM 447

Query: 345 KNV-DGTIKAIREFSYNDYYNN 365
                     ++  +  D ++ 
Sbjct: 448 VTKAGKDRVLVKRETLFDVFHR 469


>gi|312377939|gb|EFR24645.1| hypothetical protein AND_10627 [Anopheles darlingi]
          Length = 446

 Score =  166 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 67/375 (17%), Positives = 123/375 (32%), Gaps = 28/375 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +++D   ++  L    +  K   VK   A+KC     +  TL+    G   +S  E+ 
Sbjct: 35  PLHVLDLDDVV--LKHYGWCAKMPRVKPFYAVKCNDDPRILQTLHMLGAGFDCASKGELE 92

Query: 65  LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                    +   +    K       A      T+ F+   +L K      + H  + +R
Sbjct: 93  RILGLGVDPDNIIFAQPAKSVPSLLYARSKQVLTMTFDGAVELEKIHRHYPEAHLVLRIR 152

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
            +               P  R G +          NV G+ FH   + +    +   ++ 
Sbjct: 153 HDSQKVRCSLGKKFGCEP-VRDGPELLRYAAELGMNVVGISFHVGSDCEEHEVYYDAVQV 211

Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFSEKYSVQIYLEPG 234
            +  F +      ++  + +GGG    +      + V       + F    +V+I  EPG
Sbjct: 212 AKGLFDYAKTLGYKLTVLDIGGGFPGDNNKPLDRFAVAVNAAIDRFFPADCNVRIMAEPG 271

Query: 235 EAIVTNTTTLNTTVL------------DISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
              V +  TL + V                  I +  + D             Q +  I 
Sbjct: 272 RYYVASAVTLVSFVESKRVVKEVQEEDGTECTIMHYYLNDGVFGTFYTTAHEAQPAIPIV 331

Query: 283 PNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                   Y +MV G +C + D+         +++GD + FE+   Y       FNG  +
Sbjct: 332 ARKPGATEYRSMVWGPTCDSVDLILNDWKLPELELGDSVVFENCGAYTSVLSCRFNGFAL 391

Query: 340 PTIAVKNVDGTIKAI 354
           P +     +GT K +
Sbjct: 392 PKVVAYLREGTWKLL 406


>gi|218531665|ref|YP_002422481.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium chloromethanicum CM4]
 gi|218523968|gb|ACK84553.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium chloromethanicum CM4]
          Length = 428

 Score =  166 bits (421), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 45/390 (11%), Positives = 97/390 (24%), Gaps = 37/390 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   +            +   ++  ++K      +    +Q   G   +S  E
Sbjct: 39  GTPLFVYDADTMRRIYRALCAALADF-AEVDFSVKANPNPAVIRVFSQEGAGAEIASGAE 97

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
                      +   +    K       +       I      ++ +    A++   ++ 
Sbjct: 98  FDAAIRAGVPPDKILFAGPGKGAADLDRVIGDGIGEIHLENREEIVRVAAAAERHGVRVR 157

Query: 120 LRINPSVSYSKFIL-ADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKS 171
           + +  +   +            S  G   +D   +           + GL      +   
Sbjct: 158 VALRINPGATAQGGAMRMGGKPSPFGFDEEDIEAAIDTVEAAPRLRLVGLHLFAGTQGLK 217

Query: 172 FL----CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV-----------KDFCQ 216
                  +   L    +        +E I LGGG+                     D   
Sbjct: 218 ADTLLGQWRYGLGLAARIANRTGRPLETIDLGGGLGIPYFSGDTALDLGAIRAGLPDLIA 277

Query: 217 RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY---- 272
            L+      S ++ LEPG  +          VL + E+  +  ++      H        
Sbjct: 278 TLRADPLMASARVVLEPGRYLTGPAGVYVARVLALKESRGSRFVITDGGMHHHLAASGNL 337

Query: 273 -----LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
                  +  +A            V G  C   D+        P+  GD ++      Y 
Sbjct: 338 GQIVKRDFPLAAVTDLGGERAATAVVGPLCTPLDMLARAAPLPPLAEGDLVAVLQSGAYG 397

Query: 328 INRKNW-FNGINMPTIAVKNVDGTIKAIRE 356
           +      F     P   + +     +    
Sbjct: 398 LTASPMGFLSHPTPAEVLVDGGEAREIRAR 427


>gi|262204912|dbj|BAI48036.1| ornithine decarboxylase 1 [Sus scrofa]
          Length = 461

 Score =  166 bits (421), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 65/379 (17%), Positives = 116/379 (30%), Gaps = 33/379 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       +++    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 40  FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSRTIVQTLAAIGTGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        +N    +    S++   K        K+ LRI  
Sbjct: 98  VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++      +V G+ FH          F+  + +   
Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERARDLDIDVIGVSFHVGSGCTDPETFAQAISDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     V+I  EPG 
Sbjct: 218 VFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPPDSGVRIIAEPGR 277

Query: 236 AIVTNTTTLNTTVLDIS-------------------ENIKNLVIVDSSVEAHVPDYLLYQ 276
             V +  TL   ++                              V  S    + D+   Q
Sbjct: 278 YYVASAFTLAVNIIAKKLVLKEQTGSDDEEEASEQTFMYYVNDGVYGSFNCILYDHAHVQ 337

Query: 277 E--SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                   P+   Y++ + G +C   D   E      + +GD + FE++  Y +   + F
Sbjct: 338 PLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCRLPEMHVGDWMLFENMGAYTVAAASTF 397

Query: 335 NGINMPTIAVKNVDGTIKA 353
           NG   P I       T + 
Sbjct: 398 NGFQRPAIYYVMSGPTWQL 416


>gi|124298701|gb|ABN04356.1| putative ornithine decarboxylase [Theobroma cacao]
          Length = 411

 Score =  166 bits (421), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 55/359 (15%), Positives = 108/359 (30%), Gaps = 23/359 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y++D   ++   D   + R     +   A+KC     +   L     G   +S  E+ 
Sbjct: 47  PFYVLDLGVVMALFD--KWARNLPMAQPFYAVKCNPNPALLGALATLGSGFDCASKAEIE 104

Query: 65  LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                        +    K       A     +   F++  +L K K    K    I ++
Sbjct: 105 SVLSLGVSPGRIIFANPCKAESHIKYAATVGVNLTTFDSKEELEKIKKWHPKCALLIRVK 164

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
                     +                   ++    V G+ FH       F  +   +  
Sbjct: 165 APDDGGARCPLGPKY-GALPEEVTPLLQAAQTARLTVTGVSFHIGSGAMQFRAYREAIAA 223

Query: 182 IEKEFGH----FITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
            +  F       + ++  +++GGG        +            F  + S+ +  EPG 
Sbjct: 224 AKTVFETAARLGMPKMHVLNIGGGFTAGPQFAEAASTVKAALQAYFPNEPSLTVIAEPGR 283

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDY----LLYQESATIYPNTG 286
               +  TL T ++                   S+   + D+     +    A+     G
Sbjct: 284 FFAESAFTLATNIIGKRVRGDLREYWINDGIYGSMNCILYDHAVVTCMPLARASSPRCKG 343

Query: 287 PYTAM--VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343
             T    V G +C A D   + +    +++ D + F ++  Y     + FNG N   I 
Sbjct: 344 ARTYDSTVFGPTCDALDTVLKVYPLPELQVNDWLVFPNMGAYTAAAGSNFNGFNTSAIL 402


>gi|326916504|ref|XP_003204547.1| PREDICTED: ornithine decarboxylase-like [Meleagris gallopavo]
          Length = 464

 Score =  166 bits (421), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 64/392 (16%), Positives = 118/392 (30%), Gaps = 44/392 (11%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   ++       + +    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 44  FYVADLGDIVK--KHMRWHKALPRVTPFYAVKCNDSEAVVKTLAAVGAGFDCASKTEIQL 101

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        ++    +    S++   K        K+ LRI  
Sbjct: 102 VQSVGVPPERIIYANPCKQLSQIKHAASSGVQMMTFDSEVELMKIARAHPKAKLVLRITT 161

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++ +     + G+ FH          F   + +   
Sbjct: 162 DDSKAVCRLSVKFGATLKTSRLLLERAKELDLVIVGVSFHVGSGCTDPETFVQAISDARC 221

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     V I  EPG 
Sbjct: 222 VFDMGAELGFSMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPLDSEVTIIAEPGR 281

Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270
             V +  TL   ++                          +++ +           AHV 
Sbjct: 282 YYVASAFTLAVNIIAKKIVIKEQTGSDDEDDVNDKTLMYYVNDGVYGSFNCILYDHAHVK 341

Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
             L  +           Y+  + G +C   D   E      +++GD I FE++  Y +  
Sbjct: 342 PVLQKRPKPDDSC----YSCSIWGPTCDGLDRIVERCNMPELQVGDWILFENMGAYTVAA 397

Query: 331 KNWFNGINMPTIAVKNVDGTIKA---IREFSY 359
            + FNG   PTI         +    I+E  +
Sbjct: 398 ASTFNGFQRPTIHYVMSRPAWQLMQQIKEQEF 429


>gi|170049417|ref|XP_001855927.1| ornithine decarboxylase [Culex quinquefasciatus]
 gi|167871262|gb|EDS34645.1| ornithine decarboxylase [Culex quinquefasciatus]
          Length = 436

 Score =  166 bits (421), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 63/365 (17%), Positives = 116/365 (31%), Gaps = 27/365 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +++D   ++          K   V    A+KC     +  TL     G   +S  E+ 
Sbjct: 52  PVHILDLDDVVAKHQNWRR--KLPRVDPFYAVKCNDDPAIVQTLIALGAGFDCASKAEIE 109

Query: 65  LGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           L  +         Y    K  D  + A     + + F+   +L+K      +    + + 
Sbjct: 110 LVLQRGGDPSRIIYAHTAKSIDSLVYAKACGINLMTFDGEIELDKINQVHPEASLVLRIH 169

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
            + + +           P     +  +   +S   +V G+ FH    N    CF   +K 
Sbjct: 170 YDSANAQVSLGKKFGCDPEHEAPQLLRYA-KSLGLSVVGISFHVGSGNSDHECFYGAIKA 228

Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFSEKYSVQIYLEPG 234
            +K F +       +  + +GGG           Y         + F  K +V++  EPG
Sbjct: 229 AKKLFDYAQSLGYDLRLLDIGGGYPGDHDKPIDPYATTINGALQRFFPLKTNVRVIAEPG 288

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP------DYLLYQESATIYPNTGPY 288
              V +  TL   V            V   +           D+L  ++           
Sbjct: 289 TYYVASAVTLIANVQSKRIVRTPQGTVRELMYYLNDGLFGSFDWLNPRKYPPQVIPGNRQ 348

Query: 289 TAM--------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                      + G +C + D+       + ++IGD + F+D+  Y       FNG   P
Sbjct: 349 LVRSRELFLTTLWGPTCDSTDLILSGMAMEELQIGDFLVFDDMGAYGTVLATNFNGFAKP 408

Query: 341 TIAVK 345
            + V 
Sbjct: 409 KVMVY 413


>gi|307591535|ref|YP_003900334.1| Diaminopimelate decarboxylase [Cyanothece sp. PCC 7822]
 gi|306986389|gb|ADN18268.1| Diaminopimelate decarboxylase [Cyanothece sp. PCC 7822]
          Length = 409

 Score =  166 bits (421), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 59/378 (15%), Positives = 120/378 (31%), Gaps = 19/378 (5%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           +P YL   + L   +            +   A        +     +   G  +++  ++
Sbjct: 31  SPLYLYQGEVLRQEISHITRSIPYHNTRFQFATVTNGNIALLKIFKELGWGLHANTPGDI 90

Query: 64  MLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLH---KK 117
            LG    F  +   Y+ +  + +        N   +  ++VSQL       ++L      
Sbjct: 91  YLGLKAGFKSDNIVYSGSNLNRQEIEQLFNWNIKILNLDSVSQLQLCCQIYEELKGKLTP 150

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
             L    ++           RP      +     +S    + GL F+      +   F+ 
Sbjct: 151 PKLGFRLNLPELTGESRIGIRPEEF--PQALYIAQSAGLKIQGLHFYRGTGTNATKAFTG 208

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSEKYSVQI--YL 231
           +++ + K     +    ++  GGG  +  +     +    F + L E   K + +I   +
Sbjct: 209 VIETLIKTC-QLLPDWNYLDFGGGFGYRYQHQGIQFDWGIFGEALTEALNKLNRKIELII 267

Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPNTGPYT- 289
           EPG A++    TL   V+ +       +I   +  A++    +       +         
Sbjct: 268 EPGRAVIAACGTLLAQVVSVKWQENKQIIGVDTTVANLSVPSVHGGYREIVTWKENTEQL 327

Query: 290 --AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
               VCG +  + D  G+      ++IGD I   DV  Y     + F         +   
Sbjct: 328 YLTDVCGNTTYSRDYLGKNCQLPALEIGDMIGILDVGAYGYAMSSHFLHRPRAAEVLLEG 387

Query: 348 DGTIKAIREFSYNDYYNN 365
                  R   Y+   NN
Sbjct: 388 KTHKLIRRREDYSILLNN 405


>gi|237807627|ref|YP_002892067.1| Ornithine decarboxylase [Tolumonas auensis DSM 9187]
 gi|237499888|gb|ACQ92481.1| Ornithine decarboxylase [Tolumonas auensis DSM 9187]
          Length = 386

 Score =  166 bits (421), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 64/366 (17%), Positives = 124/366 (33%), Gaps = 18/366 (4%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P  ++D+  +              GV+L  ALK      +  TL     G   ++  E
Sbjct: 20  GSPLLVLDQAAVRKQYRALTQAL--PGVRLHYALKPLPHSAVVATLKAEGCGFDLATNGE 77

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           V +  E +   +   +    K              +F   + +   K    +   ++ LR
Sbjct: 78  VDVMLENQINPDDCIHTHPIKRDGDIRYALEYGCKVFVFDNPVELDKFLPYQDKAELLLR 137

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE---NKSFLCFSAM 178
           ++     +K  L+               K ++   NV GL FH   +   +K  +     
Sbjct: 138 VSFPNPETKVDLSKKFGCTPEAALPLLRKAKAMGLNVIGLSFHVGSQVPNSKRHVEAITS 197

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSVQIYL--E 232
              I ++       ++ + +GGG          D+ + +FC  ++E        I L  E
Sbjct: 198 CNQILRDAAAEDINLQVLDIGGGFPVNYGADGADFDIYEFCAPIREALSHTPKGIRLLAE 257

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGP 287
           PG  I     T   +V+  +E  +            S    + D++ Y +SA        
Sbjct: 258 PGRFISAPCMTSVASVMGKAERFERTWYYLDDGLYGSYSGQLFDHINYPKSAPYATGEAK 317

Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
             A++ G +C + D+  +      + +GD I  + +  Y       FN     +I V + 
Sbjct: 318 -PAVLAGPTCDSIDVLADDIDLPELDVGDVIVGKMMGAYTWASATEFNFFRKASILVIDS 376

Query: 348 DGTIKA 353
              I+ 
Sbjct: 377 QEAIEI 382


>gi|172072645|ref|NP_001116455.1| ornithine decarboxylase [Sus scrofa]
 gi|170673179|gb|ACB30110.1| ornithine decarboxylase 1.ODC1 [Sus scrofa]
          Length = 461

 Score =  166 bits (421), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 65/379 (17%), Positives = 116/379 (30%), Gaps = 33/379 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       +++    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 40  FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSRTIVQTLAAIGTGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        +N    +    S++   K        K+ LRI  
Sbjct: 98  VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++      +V G+ FH          F+  + +   
Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERARDLDIDVIGVSFHVGSGCTDPETFAQAISDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     V+I  EPG 
Sbjct: 218 VFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPPDSGVRIIAEPGR 277

Query: 236 AIVTNTTTLNTTVLDIS-------------------ENIKNLVIVDSSVEAHVPDYLLYQ 276
             V +  TL   ++                              V  S    + D+   Q
Sbjct: 278 YYVASAFTLAVNIIAKKLVLKEQTGSDDEEEASEQTFMYYVNDGVYGSFNCILYDHAHVQ 337

Query: 277 E--SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                   P+   Y++ + G +C   D   E      + +GD + FE++  Y +   + F
Sbjct: 338 PLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCRLPEMHVGDWMLFENMGAYTVAAASTF 397

Query: 335 NGINMPTIAVKNVDGTIKA 353
           NG   P I       T + 
Sbjct: 398 NGFQRPAIYYVMSGPTWQL 416


>gi|16765687|ref|NP_461302.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|167993048|ref|ZP_02574143.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|16420903|gb|AAL21261.1| putative diaminopimelate decarboxylase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|205328829|gb|EDZ15593.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|261247566|emb|CBG25393.1| putative amino acid decarboxylase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267994461|gb|ACY89346.1| putative diaminopimelate decarboxylase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301158918|emb|CBW18431.1| putative amino acid decarboxylase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312913351|dbj|BAJ37325.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|321222938|gb|EFX48009.1| Diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|323130692|gb|ADX18122.1| putative diaminopimelate decarboxylase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|332989293|gb|AEF08276.1| putative diaminopimelate decarboxylase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 465

 Score =  166 bits (421), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 77/418 (18%), Positives = 136/418 (32%), Gaps = 57/418 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+Y+  + +++ N+             K   A K  +  G+   +        ++S Y
Sbjct: 45  PTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQY 104

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116
           EV    E  F G+   +N   K           D   I  +++ +L      ++KL K  
Sbjct: 105 EVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVA 164

Query: 117 KIGLRINPSVSYSKF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170
            + +R+ P+V  +          A       +  E C+  +     ++ GL  H   +  
Sbjct: 165 NVCVRVEPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMHVGDQVP 224

Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPV--------------- 211
               F+   K +  E          + + I++GGGI    K                   
Sbjct: 225 ESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDDENGDPLKDNMYAGITA 284

Query: 212 KDFCQRLKEFSEKYSVQ--IYLEPGEAIVTNTTTLNTTV----------------LDISE 253
           +DF   +     K+     I +EPG  +  +   L T V                  +  
Sbjct: 285 QDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLTEVSCEKRKTNYDLNGNVECHVEW 344

Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF------GEFH 307
              +      S   H  D+  Y  +A+           + G  C  GD F       EF 
Sbjct: 345 KFVDAGYSVLSDSQHF-DWFFYVYNASRMTAAHDAWIKLAGPLCDGGDYFHMGVKGEEFL 403

Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364
             K   +GD ++F D   Y I  +  +N      + + + +G  + IR   SY D   
Sbjct: 404 LPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMIDKNGDTRLIRREDSYEDMVK 461


>gi|114576061|ref|XP_001156995.1| PREDICTED: ornithine decarboxylase 1 isoform 4 [Pan troglodytes]
 gi|114576063|ref|XP_001157039.1| PREDICTED: ornithine decarboxylase isoform 5 [Pan troglodytes]
 gi|114576065|ref|XP_001157192.1| PREDICTED: ornithine decarboxylase 1 isoform 8 [Pan troglodytes]
 gi|114576067|ref|XP_001157249.1| PREDICTED: ornithine decarboxylase 1 isoform 9 [Pan troglodytes]
 gi|114576069|ref|XP_001157295.1| PREDICTED: ornithine decarboxylase 1 isoform 10 [Pan troglodytes]
 gi|114576071|ref|XP_001157362.1| PREDICTED: ornithine decarboxylase 1 isoform 11 [Pan troglodytes]
 gi|114576073|ref|XP_001157412.1| PREDICTED: ornithine decarboxylase 1 isoform 12 [Pan troglodytes]
 gi|114576075|ref|XP_001157463.1| PREDICTED: ornithine decarboxylase 1 isoform 13 [Pan troglodytes]
 gi|114576077|ref|XP_001157520.1| PREDICTED: ornithine decarboxylase isoform 14 [Pan troglodytes]
 gi|114576079|ref|XP_001157580.1| PREDICTED: ornithine decarboxylase 1 isoform 15 [Pan troglodytes]
 gi|114576081|ref|XP_515299.2| PREDICTED: ornithine decarboxylase 1 isoform 17 [Pan troglodytes]
 gi|114576083|ref|XP_001157701.1| PREDICTED: ornithine decarboxylase 1 isoform 16 [Pan troglodytes]
          Length = 461

 Score =  166 bits (421), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 67/392 (17%), Positives = 123/392 (31%), Gaps = 41/392 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       +++    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 40  FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSKAIVKTLAAIGTGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        +N    +    S++   K        K+ LRI  
Sbjct: 98  VQSLGVLPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       R      ++ +    +V G+ FH          F   + +   
Sbjct: 158 DDSKAVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     V+I  EPG 
Sbjct: 218 VFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSDSGVRIIAEPGR 277

Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270
             V +  TL   ++                          +++ +           AHV 
Sbjct: 278 YYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVK 337

Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
             L  +           Y++ + G +C   D   E      + +GD + FE++  Y +  
Sbjct: 338 PLLQKRPKPD----EKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAA 393

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
            + FNG   PTI         + +++F   D+
Sbjct: 394 ASTFNGFQRPTIYYVMSGPAWQLMQQFQNPDF 425


>gi|126324023|ref|XP_001362614.1| PREDICTED: similar to membrane protein palmitoylated 4 [Monodelphis
           domestica]
          Length = 461

 Score =  166 bits (421), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 64/374 (17%), Positives = 115/374 (30%), Gaps = 33/374 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       + +    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 40  FYVADLGDILK--KHLRWYKALPRVTPFYAVKCNDSRAILKTLAAVGAGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       Y    K        +N    +    S++   K        K+ L I  
Sbjct: 98  VQSLGVPPGRIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLSIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++ +    +V G+ FH          F   + +   
Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQAVSDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F     F   +  + +GGG   ++      +           K F     V+I  EPG 
Sbjct: 218 VFDMGAEFGFNMYLLDIGGGFPGSEDVKLKFEEISSVINPALDKYFPPDSGVRIIAEPGR 277

Query: 236 AIVTNTTTLNTTVL-------------------DISENIKNLVIVDSSVEAHVPDYLLYQ 276
             V +  TL   ++                   D +        V  S    + D+   +
Sbjct: 278 YYVASAFTLAVNIIAKKLVLKEQTGSDDEDEANDQTFMYYVNDGVYGSFNCILFDHAHVK 337

Query: 277 E--SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                   P+   Y++ + G +C   D   E      + +GD + FE++  Y +   + F
Sbjct: 338 PLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAAASTF 397

Query: 335 NGINMPTIAVKNVD 348
           NG   PTI      
Sbjct: 398 NGFQRPTIYYVMSG 411


>gi|326771975|ref|ZP_08231260.1| diaminopimelate decarboxylase [Actinomyces viscosus C505]
 gi|326638108|gb|EGE39009.1| diaminopimelate decarboxylase [Actinomyces viscosus C505]
          Length = 486

 Score =  166 bits (421), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 59/430 (13%), Positives = 126/430 (29%), Gaps = 68/430 (15%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMDG 54
            +P +++D+  L     +               AG +   A K F    +   + +   G
Sbjct: 54  PSPVFVLDEADLRGRAASWAAAMHEEFWPSYGMAGGEAFYAGKAFLTTKVAQWVLEEGMG 113

Query: 55  TTSSSLYEV---MLGHEKFGGETHA--------YNVAYKDCEID-AVLSNCDTIIFNTVS 102
             ++S  E+   +   ++  GE           +       EI  A+  +   ++ +++ 
Sbjct: 114 IDTASRGELAVSLAALQEVDGEEATTDATRLGLHGNGKTQAEIAVALTHHVGHLVLDSLE 173

Query: 103 QLNKFKDKAQKLHK----------KIGLRINPSVSYSKFILADPNRPFSRLGEK------ 146
           ++       ++L            K+ +R+   V               + G        
Sbjct: 174 EVELAVRAVRELRASSVYGPEETGKVMVRLTTGVHAGGHEYISTGHEDQKFGLSVHGGAA 233

Query: 147 ---CKDKIESEIKNVNGLMFHNNCENKSFLCFS----AMLKNIEKEFGHFITQIEWISLG 199
                  I +    ++GL  H   +      F      +L    +           + LG
Sbjct: 234 RQAIDAIIAAPELELHGLHSHIGSQILDLAGFREAVGIVLTLRHEVAVDTGHLCPEVDLG 293

Query: 200 GGIHFTDKDYPVKDF---------CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTT 247
           GG                       + ++E  E+       + +EPG A+   TT    T
Sbjct: 294 GGYGIAYTGADPVPPSPAQVARTLAEAVRETCERLGDEVPTVSIEPGRAVAGPTTVTLYT 353

Query: 248 VLDISENI------KNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA------MVCGR 295
           V  +          +  V +D  +  ++   L      T+  N  P          V G+
Sbjct: 354 VTGLKRVELGEGASRLYVSIDGGMSDNIRPALYEAAYTTLIANRRPDPQAGLVRSRVVGK 413

Query: 296 SCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            C +GD+          + +GD ++      Y  +  + +N    P +       +   +
Sbjct: 414 HCESGDVVVRDVDLPADLAVGDVLAVPATGAYGRSMASNYNLFTRPGVRWVREGESGWVL 473

Query: 355 REFSYNDYYN 364
           R  +  D   
Sbjct: 474 RPETIEDLVR 483


>gi|49475973|ref|YP_034014.1| ornithine decarboxylase [Bartonella henselae str. Houston-1]
 gi|49238781|emb|CAF28047.1| Ornithine decarboxylase [Bartonella henselae str. Houston-1]
          Length = 377

 Score =  166 bits (421), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 49/363 (13%), Positives = 114/363 (31%), Gaps = 26/363 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   +  N          +  ++  A+K   A  + + L        ++S+ E+ 
Sbjct: 18  PCLIVDLDIIRENYLNFEKALPQS--RIFYAIKANPAPEILNLLASLGSSFDAASVAEIE 75

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +        +  ++    K     A        ++         K        ++  R+ 
Sbjct: 76  MALKAGATSDRISFGNTIKKERDIAQAYALGISLYAVDCVEEVEKIARAAPGVRVFCRVL 135

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
                +++ L+        +      +         G+ FH   +      +   L +  
Sbjct: 136 TDGKGAEWPLSRKFGCVPAMAVDVLRRAHQLGLQAYGVSFHVGSQQTDLSAWDRALSDAA 195

Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPG 234
             F    H    ++ +++GGG                      LK++      +  +EPG
Sbjct: 196 TVFRHLEHEGISLKLVNMGGGFPTRYLKDVPTTQAYGTVVFDSLKKYFGNRIPETIIEPG 255

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPNTG 286
             +V N   + T V+ IS+   N  I          + +   + + + Y    T + +  
Sbjct: 256 RGMVGNAGVIRTEVVLISKKADNDNIRWVYLDVGKFNGLTETMDEAIRYP-IETPHDDKA 314

Query: 287 PYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI-NMPT 341
               ++ G +C + D+  E   +     + +GD +       Y     +  FNG   +P+
Sbjct: 315 MEPCILAGPTCDSADVLYEKTPYLLPLSLTVGDELLIHGTGAYTATYASVAFNGFEPLPS 374

Query: 342 IAV 344
             +
Sbjct: 375 YVI 377


>gi|91975336|ref|YP_567995.1| ornithine decarboxylase [Rhodopseudomonas palustris BisB5]
 gi|91681792|gb|ABE38094.1| ornithine decarboxylase [Rhodopseudomonas palustris BisB5]
          Length = 380

 Score =  166 bits (420), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 50/356 (14%), Positives = 109/356 (30%), Gaps = 25/356 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D + + +N  +          ++  A+K   A  +   L         +S+ E+ 
Sbjct: 21  PCLVVDLEVVRDNFTSFARAL--PDSRVFYAVKANPAPEVLSLLASLGSCFDCASVQEIQ 78

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +        +  +Y    K     A        +F+        K        K+  RI 
Sbjct: 79  MALAAGATPDRISYGNTIKKERDIARSYELGIRLFSVDCTAEVEKIARSAPGSKVFCRIL 138

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              + +++ L+        +     D  +       G+ FH   + +    +   L    
Sbjct: 139 YDCAGAEWPLSRKFGCDPEMAVDVLDAAKRLGLEAYGISFHVGSQQRKVKAWDRALAMAA 198

Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIYLEPG 234
             F         +  +++GGG                +   + L++       +  +EPG
Sbjct: 199 TVFRDCAERGISLSMVNMGGGFPTKYLKEVPPVVQYGRSIFRALRKHFGNQIPETIIEPG 258

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPNTG 286
             +V N   + T V+ IS            ++          + + + Y   +       
Sbjct: 259 RGMVGNAGVIETEVVLISNKSDKDETRWVYLDIGKFGGLAETMDESIRYAIRSRHDGAEM 318

Query: 287 PYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338
               ++ G +C + D+  E   +     ++IGD++  E    Y        FNG  
Sbjct: 319 T-PCVLAGPTCDSADVLYEKMPYPLPVTLEIGDKLLIEGTGAYTSTYSAVAFNGFP 373


>gi|325129406|gb|EGC52238.1| diaminopimelate decarboxylase [Neisseria meningitidis OX99.30304]
          Length = 342

 Score =  166 bits (419), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 60/325 (18%), Positives = 113/325 (34%), Gaps = 22/325 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  K  L    +            +  A+K      +         G    S  E
Sbjct: 18  GTPLYVYSKSALTEAFENYQTAFATLNPLVCYAVKANGNLSIIKHFASLGSGFDIVSDGE 77

Query: 63  VMLGHEKFG--GETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +       G   +T    V   + EI+ A+ +        ++ ++++ +  A +L K   
Sbjct: 78  LARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEIDRIQKVAARLGKVAP 137

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           + LR+NP V              ++ G    D +E+           + G+  H   +  
Sbjct: 138 VSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHASRQSHLKIVGIDCHIGSQLT 197

Query: 171 SFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK 224
                    + I     +       +E + LGGG+    +D     +  + Q +++    
Sbjct: 198 DLSPLVEACERILVLVDQLADEGIVLEHLDLGGGVGIVYQDENVPDLGAYAQAVQKLIGT 257

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             +++ LEPG ++V N  +L T V  +     KN V+VD+++   +   L          
Sbjct: 258 RRLKLILEPGRSLVGNAGSLLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIEAV 317

Query: 284 NTGPY---TAMVCGRSCLAGDIFGE 305
            T      TA + G  C  GD  G+
Sbjct: 318 ETKDIEPLTANIVGPICETGDFLGK 342


>gi|49474545|ref|YP_032587.1| ornithine decarboxylase [Bartonella quintana str. Toulouse]
 gi|49240049|emb|CAF26473.1| Ornithine decarboxylase [Bartonella quintana str. Toulouse]
          Length = 377

 Score =  166 bits (419), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 49/367 (13%), Positives = 116/367 (31%), Gaps = 34/367 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   +  N          +  ++  A+K   A  + + L        ++S+ E+ 
Sbjct: 18  PCLIVDLDVVRENYLNFEKALPQS--RIFYAIKANPAPEILNLLASLGSSFDAASVAEIE 75

Query: 65  LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +        +  ++      +   + A          + V ++ K    A  +     + 
Sbjct: 76  MALKAGATPDRISFGNTIKKERDIVQAYALGISLYAVDCVEEVEKIARAAPGVRVFCRVL 135

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV--NGLMFHNNCENKSFLCFSAML 179
            +   +           P   +         +    +  +G+ FH   +      +   L
Sbjct: 136 TDGKGAEWPLSRKFGCVPAKAVDV----LRHAHQLGLQAHGVSFHVGSQQTDLRAWDRAL 191

Query: 180 KNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIY 230
            +    F H       ++ I++GGG                      LK++      +  
Sbjct: 192 SDAATVFRHLEQEGISLKLINMGGGFPTRYLKDVPTTQAYGTVVFDSLKKYFGNRIPETI 251

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282
           +EPG  +V N   + T V+ IS+   N  +          + +   + + + Y    T +
Sbjct: 252 IEPGRGMVGNAGVIRTEVVLISKKADNDNVRWVYLDVGKFNGLTETMDEAIRYP-IETPH 310

Query: 283 PNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI- 337
            +      ++ G +C + D+  E   +     + +GD +       Y     +  FNG  
Sbjct: 311 DDKAMEPCILAGPTCDSADVLYEKTPYLLPLSLTVGDELLIHGTGAYTATYASVAFNGFE 370

Query: 338 NMPTIAV 344
            +P+  +
Sbjct: 371 PLPSYVI 377


>gi|219122853|ref|XP_002181752.1| diaminopimelate decarboxylase [Phaeodactylum tricornutum CCAP
           1055/1]
 gi|217407028|gb|EEC46966.1| diaminopimelate decarboxylase [Phaeodactylum tricornutum CCAP
           1055/1]
          Length = 481

 Score =  166 bits (419), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 72/413 (17%), Positives = 125/413 (30%), Gaps = 52/413 (12%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y     KL    D  L      G+ +  A+K      +    +       +SS +E
Sbjct: 63  GTPLYAYSIDKLEEAADACLAFPNAYGLTVRYAMKACPNASILKYFHSKNIHVDASSGFE 122

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           V          E  + +      +  A++     +   +VSQL +F +       K+G+R
Sbjct: 123 VRRAMDAGVPAENISLSTQELPEDFAALVDMGVKLNACSVSQLERFGEHYAGKGAKVGVR 182

Query: 122 INPSV-------SYSKFILADPNRPFSRLGEKCK--------DKIESEIKNVNGLMFHNN 166
           +NP V       S + F   +   P S  G   +        D +E     V  +  H  
Sbjct: 183 VNPGVGSGGFSASTTGFSKTNVGGPSSSFGIWHELVTDGTVPDIVERYGLEVERIHTHIG 242

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV--------KDFCQRL 218
             +   +      K     F      ++ ++LGGG         V        K      
Sbjct: 243 SGSDPEIWQQVATK--SLSFCKVFPTVKTMNLGGGYKVGRNKGEVTTDLQKIGKPVADAF 300

Query: 219 KEFSEK--YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV----PDY 272
           K+F+EK    +Q+ +EPG  +V     L + V D              ++A +       
Sbjct: 301 KKFAEKEGRELQMEIEPGTYLVAMAGALVSKVQDKVHTTGENSHTFLKLDAGMTDVLRPS 360

Query: 273 LLYQESATIYPN---------TGPYTAMVCGRSCLAGDIFGE---------FHFEKPVKI 314
           L                        + +V G  C +GD+                +   +
Sbjct: 361 LYGAVHPITILPGSGNSADVGDETESVVVVGHCCESGDLMTPAPGEPEQLAEQELRAAAV 420

Query: 315 GDRISFEDVAGYNINRKN-WFNGINMPTIAVKNVDGTIKAIR-EFSYNDYYNN 365
           GD +  +    Y        +N        + +  G    IR   + +  Y N
Sbjct: 421 GDILVMDGSGAYCSGMSTKNYNSFPEAPEVLVDKAGKAHLIRKRQTLSQIYEN 473


>gi|304404706|ref|ZP_07386367.1| Orn/DAP/Arg decarboxylase 2 [Paenibacillus curdlanolyticus YK9]
 gi|304346513|gb|EFM12346.1| Orn/DAP/Arg decarboxylase 2 [Paenibacillus curdlanolyticus YK9]
          Length = 426

 Score =  166 bits (419), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 49/392 (12%), Positives = 111/392 (28%), Gaps = 34/392 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP YL D   +   ++           +L  + KC    GM   L +       +S  E
Sbjct: 22  GTPLYLYDASVVEQKVNELRSCFPE-QAELFYSFKCNPLVGMAQLLLRQGCRVEVASGGE 80

Query: 63  VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +              +    K  +    A+      I    ++++      A +    + 
Sbjct: 81  LTAALHAGCDPRNIVFTSPGKTVEELQLAIRKGIYCINVENMAEIGLVDQIAAEQGLTVD 140

Query: 120 LRINPSVSYSKFILADPNRPFSR---------LGEKCKDKIESEIKNVNGLMFHNNCENK 170
           + I  +    +   A                 L E  +         + G   +   +  
Sbjct: 141 IAIRINPDEPQQHAASIKMSGVPSQFGMDPTYLPEAIETAQRMSNVRLIGFHIYLGTQIL 200

Query: 171 SFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFS 222
                        +        F  +++++ +GGG             +    + + +  
Sbjct: 201 QADAIIRHFDQSIRTAVDLADRFGLELQFLDIGGGFGVPYFPKETALDLASLREGIMQVW 260

Query: 223 EKY-----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-HVPDYLLYQ 276
           +++     + ++ +E G  ++  +    + VL   E+  +  ++       H     L +
Sbjct: 261 QEWESRLANTRLAIESGRFLMAESGVFVSKVLYTKESKGSRYVIGDGGSHQHASSAFLGR 320

Query: 277 ESATIYPN------TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
              + +P        G +   V G  C + D+ G          GD +  E    Y +  
Sbjct: 321 YIRSNFPMRVIGEGDGEHEVTVTGPLCTSTDVIGNKVNLPIAAPGDLVVVEKSGAYGLTH 380

Query: 331 K-NWFNGINMPTIAVKNVDGTIKAIREFSYND 361
               F    MP   + + D          ++D
Sbjct: 381 SPTMFLSHPMPAEVLFDQDRYWVLRERGQFSD 412


>gi|166711271|ref|ZP_02242478.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein
           [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 869

 Score =  166 bits (419), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 55/365 (15%), Positives = 110/365 (30%), Gaps = 26/365 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y      +         I      +   A+K  A   +   L Q   G    S  E
Sbjct: 506 GTPRYAYHLPTVRVRARALAQIAAVD--QRYYAIKANAHPAILMALEQAGFGLECVSHGE 563

Query: 63  VMLGHEKFG---GETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           V    +           +  ++    E  A  +   T+  + V  L  + +      + I
Sbjct: 564 VRRVFQVLPELSPRRVLFTPSFAPKAEYVAAFALGVTVTVDNVEALRNWPEV--FRGRNI 621

Query: 119 GLRINPSVSYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNCENKSF 172
            LRI+           +     S+ G      ++  +   +    + G+  H     ++ 
Sbjct: 622 WLRIDLGHGDGHHEKVNTGGKASKFGLSSTRVDEFVNVARTLEVTITGVHAHLGSGVETG 681

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-----V 227
             +  M   +          +E I +GGG+                 +   +        
Sbjct: 682 EHWRMMYDELAGFARRIG-TVETIDIGGGLPIPYSADDEPFDLDVWAKGLAEVKAVHPGY 740

Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----ATIY 282
           ++ +EPG  +V     L  +V   I ++    V +D+ +   +   L          +  
Sbjct: 741 RLAIEPGRYLVAEAGVLLASVTQVIEKDGVQRVGLDAGMNTLIRPALYDAWHDIENLSQL 800

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKI-GDRISFEDVAGYNINRKNWFNGINMPT 341
                 T  + G  C + D+FG+        + GD +   D   Y  +  + +N   +P 
Sbjct: 801 DAPADSTFDIVGPICESSDVFGKRRRLPAATVPGDVVLVADTGAYGYSMASTYNQRELPR 860

Query: 342 IAVKN 346
             V +
Sbjct: 861 EEVID 865


>gi|240140165|ref|YP_002964642.1| putative ornithine/diaminopimelate PLP-dependent decarboxylase
           [Methylobacterium extorquens AM1]
 gi|240010139|gb|ACS41365.1| putative ornithine/diaminopimelate PLP-dependent decarboxylase
           [Methylobacterium extorquens AM1]
          Length = 429

 Score =  166 bits (419), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 45/390 (11%), Positives = 95/390 (24%), Gaps = 37/390 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   +                ++  ++K      +    +Q   G   +S  E
Sbjct: 39  GTPLFVYDADTMRRIYRALCAALAGF-AEVDFSVKANPNPAVIRVFSQEGAGAEIASGAE 97

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
                      +   +    K       +       I      ++ +    A++    + 
Sbjct: 98  FDAAIRAGVPPDKILFAGPGKGAADLDRVIGGGIGEIHLENREEIVRVAAAAERHGVHVR 157

Query: 120 LRINPSVSYSKFIL-ADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKS 171
           + +  +   +            S  G   +D   +           + GL      +   
Sbjct: 158 VALRINPGATAQGGAMRMGGKPSPFGFDEEDIEAAIDTAEAEPRLRLVGLHLFAGTQGLK 217

Query: 172 FL----CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV-----------KDFCQ 216
                  ++  L    +        +E I LGGG+                     D   
Sbjct: 218 ADTLLGQWTYGLGLAARIASRIGRPLESIDLGGGLGIPYFSGDTALDLGAIRAGLPDLIA 277

Query: 217 RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY---- 272
            L+      S ++ LEPG  +          VL + E+  +  ++      H        
Sbjct: 278 TLRADPLMASARVVLEPGRYLTGPAGVYVARVLAVKESRGSRFVITDGGMHHHLAASGNL 337

Query: 273 -----LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
                  +  +A            V G  C   D+        P+  GD ++      Y 
Sbjct: 338 GQIVKRDFPLAAVTDAGCERTQTAVVGPLCTPLDMLARAAPLPPLAEGDLVAVLQSGAYG 397

Query: 328 INRK-NWFNGINMPTIAVKNVDGTIKAIRE 356
           +      F     P   +       +    
Sbjct: 398 LTASPTGFLSHPTPAEVLVEGGEAREIRAR 427


>gi|327537995|gb|EGF24689.1| Orn/DAP/Arg decarboxylase 2 [Rhodopirellula baltica WH47]
          Length = 388

 Score =  165 bits (418), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 52/361 (14%), Positives = 114/361 (31%), Gaps = 21/361 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP  ++ + K +             GV L  A K         TLN         S  E
Sbjct: 32  GTPLLVVSRSKAIETYWAMKNAL--PGVDLYYAAKANPDLHFLSTLNGENAFIDVCSPGE 89

Query: 63  VMLGHE-KFGGET--HAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +       F  +   H +         +   +  +  +F+   +  K +     ++  + 
Sbjct: 90  LKAALAAGFTPDRMLHTHPCKTDANLWECYEAGVNWFVFDNPIEAEKIRRLTPDVNLLLR 149

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           L    + S               L        +++   V G  FH   +  +   +  +L
Sbjct: 150 LATTGASSRINLSAKFGCPMHEALELLAT--AKAKGLKVRGFSFHVGSQCLNPQDYVEVL 207

Query: 180 KNIEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIY 230
           +++ + +         +E + +GGG     ++               L+E      +++ 
Sbjct: 208 RSVREVWDEATKAGHHLEVLDIGGGFPAPYREDAPSIEAFGEVITNGLREIFGDLPIRLI 267

Query: 231 LEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAH---VPDYLLYQESATIYPNT 285
            EPG  + T + TL T V+       +    + D    +    + D+  +        + 
Sbjct: 268 AEPGRGLCTESVTLITRVIGKSRRWELPWFFLDDGIYGSFSGKIFDHTDFPLLVENDGSR 327

Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
                +V G +C + DI     +   +++G+ +    +  Y     + FNG+ M      
Sbjct: 328 ETVPCVVAGPTCDSTDIVSRDQWLPDLEVGELVLVPSMGAYAAASASPFNGLPMANSVAI 387

Query: 346 N 346
           +
Sbjct: 388 D 388


>gi|85059966|ref|YP_455668.1| diaminopimelate decarboxylase [Sodalis glossinidius str.
           'morsitans']
 gi|84780486|dbj|BAE75263.1| diaminopimelate decarboxylase [Sodalis glossinidius str.
           'morsitans']
          Length = 419

 Score =  165 bits (418), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 56/378 (14%), Positives = 116/378 (30%), Gaps = 46/378 (12%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ + + +   +             +  A K  +   +   +        S SL E+ 
Sbjct: 27  PVWVYEAETISALIAQLRRFD-----TIRFAQKACSNIHLLRLMRSQGVKVDSVSLGEIE 81

Query: 65  LGH-EKFGG----ETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                 F      +   +     D    A +      +   +   L +    A+     +
Sbjct: 82  RALLAGFLPGTENDEIVFTADLLDEPTLARVVELGIPVNAGSTDMLAQLG--ARSPGHGV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172
            LRINP   +      +     S+ G   +D       I+ +   + G+  H       +
Sbjct: 140 WLRINPGFGHGHSQKTNTGGENSKHGIWYEDLPQAVALIQHDGLRLIGIHMHIGSGVD-Y 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSE 223
              S +   + ++       +  IS GGG+             + Y       R +  S 
Sbjct: 199 DHLSQVCDAMVQQVMASGLDLAAISAGGGLSIPYRSGEEAIDTEHYFGLWDAARRRISSH 258

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQESATI 281
             + V + +EPG  +V  +  L T V  +     ++ V+VD+     +   +     A  
Sbjct: 259 LGHPVTLEIEPGRFLVAESGVLITQVRAVKDMGSRHFVLVDAGFNDLMRPAMYGSYHAIS 318

Query: 282 YPNTGPY--------TAMVCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVAGY 326
                            +V G  C +GD+F +              ++GD + F D   Y
Sbjct: 319 LLPADGRDRGAQPLRETVVGGPLCESGDVFTQTAGGGIAPRRLPLAQVGDYLVFHDTGAY 378

Query: 327 NINRKNWFNGINMPTIAV 344
             +  + +N   +    +
Sbjct: 379 GASMSSNYNSRPLLPEVL 396


>gi|259013291|ref|NP_001158445.1| ornithine decarboxylase 1 [Saccoglossus kowalevskii]
 gi|196475493|gb|ACG76357.1| ornithine decarboxylase [Saccoglossus kowalevskii]
          Length = 493

 Score =  165 bits (418), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 65/396 (16%), Positives = 116/396 (29%), Gaps = 49/396 (12%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           ++++D   ++N  +    +     V    A+KC     +   L     G   +S  E+  
Sbjct: 43  FFVMDFGDIVNKFEKWEALLPR--VHPFYAVKCNENPAVLRLLAALGTGFDCASKSEIKE 100

Query: 66  GHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
             +         Y    K       A       + F+   +L K +        ++ LRI
Sbjct: 101 ITDMGVSPSRIVYANPCKPNSHLKFAAQRKVSLMTFDNEMELQKIRKIY--PDAELVLRI 158

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
               S ++  L        +         +    NV G+ FH     +    FS  +++ 
Sbjct: 159 LTDDSTAQCQLGLKYGCHPQHAPSLLRVAKELGLNVVGVSFHVGSGCRDASAFSDAIQSS 218

Query: 183 EKEFG---HFITQIEWISLGGGIH------FTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
              F          + + +GGG         + ++            F E   V+I  EP
Sbjct: 219 RMVFDYGSALGFDFQLLDIGGGYPGQSSAAISFEEMAGCINQALDVHFPEGCGVRIISEP 278

Query: 234 GEAIVTNTTTLNTTVLDIS-------------------------------ENIKNLVIVD 262
           G   V +  TL   V+                                          V 
Sbjct: 279 GRYFVASAFTLTLNVIAKRAVARDIQTFHVPGSEDLVANTVAPSQCDEPAYMYYCNDGVY 338

Query: 263 SSVEAHVPDYLLYQESA--TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
            S    + D+   Q S    +      + + + G SC   D   E      + +GD I F
Sbjct: 339 GSFNCLLFDHATVQPSLLKKMLLGEPKFASSLWGPSCDGLDRIMENCLLPELHVGDWIVF 398

Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           ED+  Y +   + FNG   P       + T   ++ 
Sbjct: 399 EDMGAYTMCAASTFNGFPKPICYYMANESTWNFLKR 434


>gi|121998344|ref|YP_001003131.1| Orn/DAP/Arg decarboxylase 2 [Halorhodospira halophila SL1]
 gi|121589749|gb|ABM62329.1| Orn/DAP/Arg decarboxylase 2 [Halorhodospira halophila SL1]
          Length = 411

 Score =  165 bits (418), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 54/377 (14%), Positives = 105/377 (27%), Gaps = 36/377 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP++  D+  + + +           + L  A+K      +   L + +DG   +S  E
Sbjct: 37  QTPFFAYDRAMIDHRVAALRATLP-PEIHLHYAIKANPMPELVQHLARMVDGLDVASAGE 95

Query: 63  VMLGHEK--FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           + L  E      +        +D E+   L +  TI   +  +L +  + A +  +   +
Sbjct: 96  LALALETETAPADISIAGPGKQDHELARALESGVTINLESPGELERLAELANRHGRTPSV 155

Query: 121 RINPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173
            I  +     K           + G   +        I     +  G       +N +  
Sbjct: 156 AIRINPDFTLKTSGMQMGGGPKQFGIDTEQAPAVLHRIGELSFDFRGFQIFAGSQNLNTD 215

Query: 174 CFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
                   I + F     +    +  +++GGG+              R  E   ++    
Sbjct: 216 ALITAQNGIFELFNRLADEAPAPVTLLNMGGGLGIPYFANDRPLDLDRYGEHLHRHVAAC 275

Query: 230 ---------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-------- 272
                     LE G  +V         V+D   +   + +V      H            
Sbjct: 276 RQRFPNVQIVLELGRYLVGEAGVYVVRVIDRKVSRGQVFLVTDGGMHHHLAASGNLGQTI 335

Query: 273 --LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                   AT   +       V G  C   D+ G        K GD I       Y ++ 
Sbjct: 336 RRDYPIALATAMDHPAAEDVSVVGPLCTPLDVLGSRVPLPYAKPGDLIVVFQSGAYGLSA 395

Query: 331 KNWF--NGINMPTIAVK 345
              +  N        + 
Sbjct: 396 SPTYFLN-HPKAAELLV 411


>gi|32475383|ref|NP_868377.1| lysine/ornithine decarboxylase [Rhodopirellula baltica SH 1]
 gi|32445924|emb|CAD78655.1| lysine/ornithine decarboxylase [Rhodopirellula baltica SH 1]
          Length = 398

 Score =  165 bits (418), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 52/361 (14%), Positives = 114/361 (31%), Gaps = 21/361 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP  ++ + K +             GV L  A K         TLN         S  E
Sbjct: 42  GTPLLVVSRSKAIETYWAMKNAL--PGVDLYYAAKANPDLHFLSTLNGENAFIDVCSPGE 99

Query: 63  VMLGHE-KFGGET--HAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +       F  +   H +         +   +  +  +F+   +  K +     ++  + 
Sbjct: 100 LKAALAAGFTPDRMLHTHPCKTDANLWECYEAGVNWFVFDNPIEAEKIRRLTPDVNLLLR 159

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           L    + S               L        +++   V G  FH   +  +   +  +L
Sbjct: 160 LATTGASSRINLSAKFGCPMHEALELLAT--AKAKGLKVRGFSFHVGSQCLNPQDYVEVL 217

Query: 180 KNIEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIY 230
           +++ + +         +E + +GGG     ++               L+E      +++ 
Sbjct: 218 RSVREVWDEATKAGHHLEVLDIGGGFPAPYREDAPSIEAFGEVITNGLREIFGDLPIRLI 277

Query: 231 LEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAH---VPDYLLYQESATIYPNT 285
            EPG  + T + TL T V+       +    + D    +    + D+  +        + 
Sbjct: 278 AEPGRGLCTESVTLITRVIGKSRRWELPWFFLDDGIYGSFSGKIFDHTDFPLLVENDGSR 337

Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
                +V G +C + DI     +   +++G+ +    +  Y     + FNG+ M      
Sbjct: 338 ETVPCVVAGPTCDSTDIVSRDQWLPDLEVGELVLVPSMGAYAAASASPFNGLPMANSVAI 397

Query: 346 N 346
           +
Sbjct: 398 D 398


>gi|62180932|ref|YP_217349.1| putative diaminopimelate decarboxylase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|62128565|gb|AAX66268.1| putative diaminopimelate decarboxylase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|322715411|gb|EFZ06982.1| putative diaminopimelate decarboxylase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
          Length = 465

 Score =  165 bits (418), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 76/418 (18%), Positives = 136/418 (32%), Gaps = 57/418 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+Y+  + +++ N+             K   A K  +  G+   +        ++S Y
Sbjct: 45  PTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQY 104

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116
           EV    E  F G+   +N   K           D   I  +++ +L      ++KL K  
Sbjct: 105 EVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVA 164

Query: 117 KIGLRINPSVSYSKF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170
            + +R+ P+V  +          A       +  E C+  +     ++ GL  H   +  
Sbjct: 165 NVCVRVEPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMHVGDQVP 224

Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPV--------------- 211
               F+   K +  E          + + I++GGGI    K                   
Sbjct: 225 ESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDDENGDPLKDNMYAGITA 284

Query: 212 KDFCQRLKEFSEKYSVQ--IYLEPGEAIVTNTTTLNTTV----------------LDISE 253
           ++F   +     K+     I +EPG  +  +   L T V                  +  
Sbjct: 285 QNFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLTEVSCEKRKTNYDLNGNVECHVEW 344

Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF------GEFH 307
              +      S   H  D+  Y  +A+           + G  C  GD F       EF 
Sbjct: 345 KFVDAGYSVLSDSQHF-DWFFYVYNASRMTAAHDAWVKLAGPLCDGGDYFHMGVKGEEFL 403

Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364
             K   +GD ++F D   Y I  +  +N      + + + +G  + IR   SY D   
Sbjct: 404 LPKETHVGDIVAFLDAGAYAIESQTVYNNRPRTGVVMIDKNGETRLIRREDSYEDMVK 461


>gi|315658303|ref|ZP_07911175.1| diaminopimelate decarboxylase [Staphylococcus lugdunensis M23590]
 gi|315496632|gb|EFU84955.1| diaminopimelate decarboxylase [Staphylococcus lugdunensis M23590]
          Length = 353

 Score =  165 bits (418), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 51/351 (14%), Positives = 103/351 (29%), Gaps = 30/351 (8%)

Query: 44  MFDTLNQYMDGTTSSSLYEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNT 100
           M   + +        S  E+       F  +   ++   K          +     + + 
Sbjct: 1   MVKLVQEEGLQLDVVSEGELYTALSAGFDPKQIHFHGNNKTKREIQYGLENGIGYFVVDA 60

Query: 101 VSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKI 151
           + ++      A      + LR+NP V           +  S+ G   K            
Sbjct: 61  LEEIELIDKYASDTVNVV-LRVNPGVEAHTHEFIQTGQEDSKFGLSIKYGLALEAVNKIK 119

Query: 152 ESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
            S+   + G+ FH   + +         K +         Q+E ++LGGG      +   
Sbjct: 120 ASKHLYLKGIHFHVGSQIEGTEAMIETAKIVLNWLSEQQIQVELLNLGGGFGIKYVEGDT 179

Query: 212 KDFCQR-----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI 260
               +            + +       +I +EPG +IV         V  I +       
Sbjct: 180 SFPIEEGIAEITTAIKDITKELNYSVPEIGIEPGRSIVGEAGITLYEVGTIKDIPGVNKY 239

Query: 261 VDSS--VEAHVPDYLLYQESATI---YPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKI 314
           V     +  H+   L   +   +      +   T  + G+ C +GDI          V  
Sbjct: 240 VSIDGGMSDHIRTALYDAQYEALLVNRHESADETVTISGKLCESGDIIIRNAKLPSSVHR 299

Query: 315 GDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           GD ++      Y+ +  + +N +  P++         + I+  S      N
Sbjct: 300 GDILAILSTGAYHYSMSSNYNQMQKPSVFFLKDGKAREVIKRQSLRQLIIN 350


>gi|110748906|ref|XP_393529.3| PREDICTED: ornithine decarboxylase-like [Apis mellifera]
          Length = 470

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 53/373 (14%), Positives = 107/373 (28%), Gaps = 26/373 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y++D   ++          K   V    A+KC     + + L     G   +S  E+  
Sbjct: 36  FYVLDIGDVVRKHQIWKE--KMPRVSPYYAVKCNDNLIVIEVLAALGIGFDCASKSEINK 93

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       +    K        +     +    ++    K K      K+ +RI  
Sbjct: 94  VLSVGVDPSRIIFANPAKPASHIRHSAVVGVDVMTADNESELHKIKKLHPTAKVVIRIRC 153

Query: 125 SVSYSKFILADPNRPFSRL-GEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
               ++  L                        N+ G+ FH     +    F   +++ +
Sbjct: 154 DAEVAQCQLGMKFGCDPIFEAPNLLRLSRVLGLNIIGISFHVGSGCQDPPVFYRAIRHSK 213

Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV----QIYLEPGEA 236
             F        +   + +GGG         +      + E  ++Y       +  EPG  
Sbjct: 214 ILFDLATDLGFKPYLLDIGGGYPGNKGS-SIDRIADVVNEALDEYFNTDAVHVIAEPGRF 272

Query: 237 IVTNTTTLNTTVLD--------------ISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
            V +  TL T++                          V  S    + D+          
Sbjct: 273 YVASAFTLATSIHSKRSVRGDENSPNTITHNMYYINDGVYGSFNCLLYDHQHVIPIPLKK 332

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
                  + + G +C   D   E      + +GD I FE++  Y +   + FNG  +P +
Sbjct: 333 GCGKMIPSSIWGPTCDGLDQVVENVLLHEMDLGDWIIFENMGAYTLPVASPFNGFPVPKV 392

Query: 343 AVKNVDGTIKAIR 355
            +   +     ++
Sbjct: 393 HIVADENIWHLLK 405


>gi|150006522|ref|YP_001301266.1| diaminopimelate decarboxylase [Bacteroides vulgatus ATCC 8482]
 gi|265751974|ref|ZP_06087767.1| diaminopimelate decarboxylase [Bacteroides sp. 3_1_33FAA]
 gi|294778860|ref|ZP_06744277.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein
           [Bacteroides vulgatus PC510]
 gi|149934946|gb|ABR41644.1| diaminopimelate decarboxylase [Bacteroides vulgatus ATCC 8482]
 gi|263236766|gb|EEZ22236.1| diaminopimelate decarboxylase [Bacteroides sp. 3_1_33FAA]
 gi|294447313|gb|EFG15896.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein
           [Bacteroides vulgatus PC510]
          Length = 391

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 75/387 (19%), Positives = 146/387 (37%), Gaps = 25/387 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           +KTP +++D  KL++N+        +  +   +  ++K  +   M   LN+        S
Sbjct: 6   LKTPCFILDSDKLVSNVLEFKRALNSRFSNHCIGYSIKTNSLPYMLHMLNELGCYAEVVS 65

Query: 60  LYEVMLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             E  L  +  F      YN  A         + N   +  +T  ++    D  ++   K
Sbjct: 66  YTEYALALQVGFEKSHIVYNGPAKDKETFLDAIKNGAYVNIDTKREIEWLNDLNKQHSYK 125

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCE 168
           +G+R+N ++       A      SR G         E        +   + GL  H    
Sbjct: 126 VGIRVNLNLGKISPEDAKEGESDSRFGFSFENGELEEAINKIQLCKNVKLGGLHLHRTSL 185

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIH------FTDKDYPVKDFCQRLKEFS 222
            +S   +  + K   +       ++++I +GGG         T K+Y    +   L+E  
Sbjct: 186 TRSLNVYRNICKYAIRIINSLGLELDYIDVGGGYFGDKPNAPTYKEYVDTIYSSLLEEGI 245

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
           +   +++ +EPG AIV +  +  + ++D  +   + +IV       V  + L ++    +
Sbjct: 246 DVSKMKVIVEPGNAIVASPFSFLSEIIDTKKIGDSQIIVTDGSRNDVDPFFLKKDYFKSF 305

Query: 283 PNTGPYTA-----MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                        MV G SCL  D       +  + +GDRI +++V  Y +     F   
Sbjct: 306 IRKQEEKVFIDSQMVVGCSCLEYDKLFTLQNQPLLNVGDRILYQNVGAYTMTLSPLFIRF 365

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
             P + +K ++G      E++ ND   
Sbjct: 366 -FPRVYLKTLNGYEIIREEWTVNDLKQ 391


>gi|205353474|ref|YP_002227275.1| amino acid decarboxylase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205273255|emb|CAR38219.1| putative amino acid decarboxylase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|326628567|gb|EGE34910.1| putative amino acid decarboxylase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 465

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 77/418 (18%), Positives = 135/418 (32%), Gaps = 57/418 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+Y+  + +++ N+             K   A K  +  G+   +        ++S Y
Sbjct: 45  PTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQY 104

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116
           EV    E  F G+   +N   K           D   I  +++ +L      ++KL K  
Sbjct: 105 EVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVA 164

Query: 117 KIGLRINPSVSYSKF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170
            + +R+ P+V  +          A       +  E C+  +     ++ GL  H   +  
Sbjct: 165 NVCVRVEPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMHVGDQVP 224

Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPV--------------- 211
               F+   K +  E          + + I++GGGI    K                   
Sbjct: 225 ESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDDENGDPLKDNMYAGITA 284

Query: 212 KDFCQRLKEFSEKYSVQ--IYLEPGEAIVTNTTTLNTTV----------------LDISE 253
           +DF   +     K+     I +EPG  +  +   L T V                  +  
Sbjct: 285 QDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLTEVSCEKRKTNYDLNGNVECHVEW 344

Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF------GEFH 307
              +      S   H  D+  Y  +A+           + G  C  GD F       EF 
Sbjct: 345 KFVDAGYSVLSDSQHF-DWFFYVYNASRMTAAHDAWVKLAGPLCDGGDYFHMGVKGEEFL 403

Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364
             K   +GD ++F D   Y I  +  +N      +   + +G  + IR   SY D   
Sbjct: 404 LPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVRIDKNGETRLIRREDSYEDMVK 461


>gi|284047519|ref|YP_003397858.1| Lysine decarboxylase [Acidaminococcus fermentans DSM 20731]
 gi|283951740|gb|ADB46543.1| Lysine decarboxylase [Acidaminococcus fermentans DSM 20731]
          Length = 389

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 56/368 (15%), Positives = 111/368 (30%), Gaps = 23/368 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP  ++  +++  N D          +K+  A+K      + D L         +S  E
Sbjct: 22  GTPLLVLSLEQVEKNYDILRE--HIPQLKIHYAMKANPDLHILDLLINKGACFDVASDGE 79

Query: 63  VM-LGHEKFGGETHAYNVA-YKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKIG 119
           +  L      G+   Y      D    A        + +++ S++ K  +        + 
Sbjct: 80  IRTLSQLGVSGDRMIYANPIKLDAGFRACNDAGVYRMTYDSESEIRKIAEHCPGATVLLR 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           LRI+ + ++              L    K   +    +V G+ FH   +  S   +   +
Sbjct: 140 LRIDNAKAHVDLNKKFGCPREKALDLMLK--AKEAGLDVAGIAFHVGSQTVSADPYFHAM 197

Query: 180 KNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS----EKYSVQIYLE 232
               +           +  + +GGG    +            +  +    +   ++I+ E
Sbjct: 198 DITRELMAEARARGLSMRVLDIGGGFPIPETGVHYNLTALLDQVAARLREDFSDLEIWAE 257

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT--GPYT 289
           PG  +      L T V+  +E         D  +       +  Q    +          
Sbjct: 258 PGRYMCGTAVNLITRVIGENERNGQNWYFLDDGIYGTFSGVIFDQWDFKLISFKDGKKIP 317

Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349
           A   G SC + DI       +P+++GD +       Y       FNG       +     
Sbjct: 318 ATFAGPSCDSLDIMFRGKMTEPLEVGDLLLVPVCGAYTSASATTFNGFKKARTVIWEE-- 375

Query: 350 TIKAIREF 357
               +RE 
Sbjct: 376 ----VREE 379


>gi|332376635|gb|AEE63457.1| unknown [Dendroctonus ponderosae]
          Length = 462

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 60/377 (15%), Positives = 115/377 (30%), Gaps = 29/377 (7%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ +   +L        +     V+   A+KC     + + L         +S  E+  
Sbjct: 36  FYVCNLSSILEKHKGWQAVMPR--VEPHYAVKCNNDLAVLEILATLGACFDCASRAEIRK 93

Query: 66  GHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                   +   +            A      T+ F+ V +L+K ++        I +R+
Sbjct: 94  VLSLGVSPDRIIFANPAKISSHIRYAADVGVATMTFDDVCELHKIQNLYPSARLVIRIRV 153

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           + + +     +     P      +  D   S   NV G+ FH     +    F   +   
Sbjct: 154 DATDAQCPLGMKFGCEPNDA--PQLLDVARSLNLNVVGVSFHVGSGCREPAVFRRAISAA 211

Query: 183 EKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFC---QRLKEFSEKYSVQIYLEPGEA 236
              F +      +   + +GGG                   L++F     V++  EPG  
Sbjct: 212 RDVFDYASTVGFKFSLLDIGGGYPGVRGSSLTDIAAVVNNALEDFFRDMDVRVIAEPGRY 271

Query: 237 IVTNTTTLNTTVLDI---------------SENIKNLVIVDSSVEAHVPDYLLYQESATI 281
            VT+  TL   +  +                        V  S    + D+ +       
Sbjct: 272 YVTSAFTLACNIHSVRKITDVDDQGRRFETHRMYYINDGVYGSFNCVLYDHQVVCPVPLK 331

Query: 282 YPNTGPY-TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                   ++ V G +C   D   E      + IGD + FED+  Y +   + FNG  +P
Sbjct: 332 EYPESRRISSSVWGPTCDGLDRVIEDISLPDMNIGDWMVFEDMGAYTLPVASTFNGFPVP 391

Query: 341 TIAVKNVDGTIKAIREF 357
            +           ++ F
Sbjct: 392 EVCYIIKQHEWAQLKNF 408


>gi|299132171|ref|ZP_07025366.1| Orn/DAP/Arg decarboxylase 2 [Afipia sp. 1NLS2]
 gi|298592308|gb|EFI52508.1| Orn/DAP/Arg decarboxylase 2 [Afipia sp. 1NLS2]
          Length = 380

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 47/362 (12%), Positives = 115/362 (31%), Gaps = 30/362 (8%)

Query: 2   IKT-PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           + T P  ++D + + +N  T          ++  A+K   A  +   L        ++++
Sbjct: 17  LDTEPCLVVDLEVVRDNYQTFAKAL--PDSRVFYAVKANPAPEVLSLLASLGSCFDTATV 74

Query: 61  YEVMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+ +        +  ++      +     A          + V+++ K    A      
Sbjct: 75  AEIEMALAAGATPDRISFGNTIKKERDIARAYALGIRLFAVDCVAEVEKIARSAPGAKVF 134

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
             +      + +++ L+        +  +  D  +       G+ FH   + +    +  
Sbjct: 135 CRIL--YDCAGAEWPLSRKFGCEPEMAVEVLDLAKRLRLEPVGISFHVGSQQRKVKAWDR 192

Query: 178 MLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQ 228
            L    + F         +  +++GGG                +   + L++       +
Sbjct: 193 ALAMASQVFRDCAERGISLSMVNMGGGFPTKYLKDVPPVVQYGRSIFRALRKHFGNQIPE 252

Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESAT 280
             +EPG  +V N   +   V+ IS+   +       ++          + + + Y     
Sbjct: 253 TIIEPGRGMVGNAGVIEAEVVLISKKSDDDENRWVYLDIGKFGGLAETMDESIRYAIRTR 312

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRKNW-FNG 336
                     ++ G +C + D+  E         ++IGD++  E    Y     +  FNG
Sbjct: 313 HDGAEMA-PCVLAGPTCDSADVMYEKVPYPLPVTLEIGDKVLIEGTGAYTSTYSSVAFNG 371

Query: 337 IN 338
           I 
Sbjct: 372 IP 373


>gi|220930615|ref|YP_002507524.1| Orn/DAP/Arg decarboxylase 2 [Clostridium cellulolyticum H10]
 gi|220000943|gb|ACL77544.1| Orn/DAP/Arg decarboxylase 2 [Clostridium cellulolyticum H10]
          Length = 415

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 63/391 (16%), Positives = 116/391 (29%), Gaps = 41/391 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP YL D  +L         +  +A  +   ++K   ++G+   L +   G   +S  E
Sbjct: 14  KTPLYLFDGDRLEETYFNMKKVLPDA-FEFFYSVKANPSYGICRILQKCSSGIEVASAGE 72

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--K 117
           + L  E  F  +   +    K         +     I   +  ++    D A+  +K   
Sbjct: 73  LHLALEAGFDNKKILFTGPGKTYSELEFAVDSKILAINAESYKEIMLIDDIAKAKNKIVD 132

Query: 118 IGLRINPSVS-YSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCEN 169
           +GLRI+P+    SK          ++ G    +  E       S+  N+     +   + 
Sbjct: 133 VGLRIHPNFKIESKNPAISMMGTGTQFGVDIDEIPEILKYIKSSKNLNLVCFHVYAGSQI 192

Query: 170 KSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEF 221
                  A  +     F          I+ +  GGG   +     K Y  + F   + + 
Sbjct: 193 FQPDTTLAYFEQTINIFKELIEKNDLHIKVLDFGGGFGVSYDGKNKPYDFEYFGAEINKL 252

Query: 222 SEKYSVQI-----YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-------- 268
             KY           E G  ++  +    T V         + ++      H        
Sbjct: 253 YHKYEDFFQGKKLVFESGRLLLAESGVFLTEVQYRKVLHDKVFLITDGGMNHNSLSTFRE 312

Query: 269 --VPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
             +    L +    +       T  V G  C   DI G          GD +  ++   Y
Sbjct: 313 KKIRGNFLMK---ILDNRNEEETVTVAGPLCTPEDILGRNVTLNKADRGDILCIKNTGAY 369

Query: 327 NINRKN-WFNGINMPTIAVKNVDGTIKAIRE 356
             +     F G   P   +   +      + 
Sbjct: 370 GSSFSPLGFLGHPAPCEVLIYKNNEYYLKKH 400


>gi|328870102|gb|EGG18477.1| group IV decarboxylase [Dictyostelium fasciculatum]
          Length = 488

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 60/369 (16%), Positives = 115/369 (31%), Gaps = 34/369 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++       +I+    V    A+KC    G+   L         +S  E+  
Sbjct: 116 FFVADIATIIKQYQ--KWIKHLPHVTPYYAVKCNPTQGVLKVLEALGTSFDCASRNEIET 173

Query: 66  GHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                       Y    K       A L N   + F+ VS+L K +    +    + +  
Sbjct: 174 VLNLGVDPSRIIYANPCKQISALKFARLHNVKMMTFDNVSELEKIEKFFPEAELVLRIAP 233

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           + S S  +F                 +  +     V G+ FH          + A L+ +
Sbjct: 234 DDSKSLMRFGTKFGVHIDDC--SDLLEMAKEMNLKVVGVSFHVGSGCFDASAYDAALEMV 291

Query: 183 EKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ---IYLEPGEA 236
           +  F         +  + +GGG   +D       F   ++  +++       I  EPG  
Sbjct: 292 KSVFDMAKTHGMTLNLVDIGGGFTGSDDVM-FGKFTDAIRNKTKELFAPDVRIIAEPGRY 350

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVE-AHVPDYLLY-----------------QES 278
               +  L  TV+      +            ++  Y  Y                 + +
Sbjct: 351 FAAMSHVLAVTVISKRIIKQEDNRQHPRRTSNNLRQYNYYLADGVYGSFNNIQFDHAKPT 410

Query: 279 ATIYP--NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
             +    +  P    + G +C + D+         +KIGD + F+D+  Y +   + FNG
Sbjct: 411 PCLLKPSHKQPTPCTLFGPTCDSIDVIARDTQIPELKIGDWLYFKDMGAYTMASASSFNG 470

Query: 337 INMPTIAVK 345
              P I   
Sbjct: 471 FVPPPIYYY 479


>gi|74025726|ref|XP_829429.1| ornithine decarboxylase [Trypanosoma brucei TREU927]
 gi|70834815|gb|EAN80317.1| ornithine decarboxylase [Trypanosoma brucei]
          Length = 445

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 67/383 (17%), Positives = 118/383 (30%), Gaps = 33/383 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+++ D   ++   +T         V    A+KC   W +  TL     G   +S  E+ 
Sbjct: 59  PFFVADLGDIVRKHETWKKCLPR--VTPFYAVKCNDDWRVLGTLAALGTGFDCASNTEIQ 116

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                    E   Y    K         +    +          K        K+ LRI+
Sbjct: 117 RVRGIGVPPEKIIYANPCKQNSHIRYARDSGVDVMTFDCVDELEKVAKTHPKAKMVLRIS 176

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S ++  L+              ++ +    +V G+ FH    +     F+  + +  
Sbjct: 177 TDDSLARCRLSVKFGAKVEDCRFILEQAKKLNIDVTGVSFHVGSGSTDASTFAQAISDSR 236

Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRL------KEFSEKYSVQIYLEPG 234
             F         +  + +GGG   T       +    +      K F     + I  EPG
Sbjct: 237 FVFDMGTELGFNMHILDIGGGFPGTRDAPLKFEEIAGVINNALEKHFPPDLKLTIVAEPG 296

Query: 235 EAIVTNTTTLNTTVLDIS-------------------ENIKNLVIVDSSVEAHVPDYLLY 275
              V +  TL   V+                              V  S    + D+ + 
Sbjct: 297 RYYVASAFTLAVNVIAKKVTPGVQTDVGAHAESNAQSFMYYVNDGVYGSFNCILYDHAVV 356

Query: 276 QESATI--YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
           +        PN   Y + V G +C   D   E ++   +++G+ + FED+  Y +   + 
Sbjct: 357 RPLPQREPIPNEKLYPSSVWGPTCDGLDQIVERYYLPEMQVGEWLLFEDMGAYTVVGTSS 416

Query: 334 FNGINMPTIAVKNVDGTIKAIRE 356
           FNG   PTI           +RE
Sbjct: 417 FNGFQSPTIYYVVSGLPDHVVRE 439


>gi|13124043|sp|O50657|DCLO_SELRU RecName: Full=Lysine/ornithine decarboxylase; Short=LDC
 gi|2897824|dbj|BAA24923.1| lysine/ornithine decarboxylase [Selenomonas ruminantium]
 gi|28804806|dbj|BAC57940.1| lysine decarboxylase [Selenomonas ruminantium]
          Length = 393

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 57/362 (15%), Positives = 108/362 (29%), Gaps = 22/362 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP+ +    K+  N          AG  +  A+K      +   L         +S  
Sbjct: 18  IPTPFLVASLDKVEENYQFMRRHLPRAG--VFYAMKANPTPEILSLLAGLGSHFDVASAG 75

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+ + HE    G    Y    KD      A   N     F+  S+++K           +
Sbjct: 76  EMEILHELGVDGSQMIYANPVKDARGLKAAADYNVRRFTFDDPSEIDKMAKAVPGADVLV 135

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
            + +  + +               L        +    +  G+ FH   ++ S   +   
Sbjct: 136 RIAVRNNKALVDLNTKFGAPVEEAL--DLLKAAQDAGLHAMGICFHVGSQSLSTAAYEEA 193

Query: 179 LKNIEKEF---GHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKYSVQI--Y 230
           L    + F         +  + +GGG    D    +  +    + + +  ++       +
Sbjct: 194 LLVARRLFDEAEEMGMHLTDLDIGGGFPVPDAKGLNVDLAAMMEAINKQIDRLFPDTAVW 253

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNT 285
            EPG  +      L T+V+      +    +            + D+  Y        N 
Sbjct: 254 TEPGRYMCGTAVNLVTSVIGTKTRGEQPWYILDEGIYGCFSGIMYDHWTYPLHCFGKGNK 313

Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
            P T    G SC   D+         +KIGD++   ++  Y       FNG  +    + 
Sbjct: 314 KPSTF--GGPSCDGIDVLYRDFMAPELKIGDKVLVTEMGSYTSVSATRFNGFYLAPTIIF 371

Query: 346 NV 347
             
Sbjct: 372 ED 373


>gi|1749562|dbj|BAA13839.1| unnamed protein product [Schizosaccharomyces pombe]
          Length = 363

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 61/366 (16%), Positives = 115/366 (31%), Gaps = 30/366 (8%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66
           ++ D   +   L    +  K   V+   A+KC     +   LN++  G   +S  E+   
Sbjct: 1   FVADLNGVYRQL--LRWHAKLPRVQPFYAVKCNPDPKVLALLNKFGTGLDCASKGELEQI 58

Query: 67  HE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPS 125
                  +   Y    K        ++    +    +    +K K    + ++ LRI+  
Sbjct: 59  LGLGVSPDRIVYANPCKAITYVRYAASKGINLMTFDNADELYKVKQHHPNSRLLLRISTD 118

Query: 126 VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKE 185
            S S   L+           K  D  +S   NV G+ FH    +     F   ++   + 
Sbjct: 119 DSNSLCRLSLKFGASLDDTGKLLDIAKSLELNVVGVSFHVGSGSYDPSAFLDAIQRSRQV 178

Query: 186 FG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ---IYLEPGEAIVT 239
           F          + + +GGG      +         ++   + Y      +  EPG   V+
Sbjct: 179 FDQGLERGFNFDLLDIGGGF----MNDSFDGVADLIRSALDTYFDPSIRVISEPGRFFVS 234

Query: 240 NTTTLNTTVLDISENIKNLVIVD-----------SSVEAHVPDY-----LLYQESATIYP 283
           ++ TL   V+   +      ++              +  H            +       
Sbjct: 235 SSFTLAVNVIAKRKLDDEEKVMYYVNDGVYGSLNCILFDHQHPVARVLKCGSRFVYNDLV 294

Query: 284 NTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
            TG +   + G +C + D+            +GD I FED   Y +   + FNG     I
Sbjct: 295 GTGQHRCFIWGPTCDSLDVIANDAHLPYEPNVGDWIYFEDAGAYTVAAASCFNGFKTSRI 354

Query: 343 AVKNVD 348
              + D
Sbjct: 355 VYLDTD 360


>gi|114319288|ref|YP_740971.1| Orn/DAP/Arg decarboxylase 2 [Alkalilimnicola ehrlichii MLHE-1]
 gi|114225682|gb|ABI55481.1| Orn/DAP/Arg decarboxylase 2 [Alkalilimnicola ehrlichii MLHE-1]
          Length = 411

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 54/376 (14%), Positives = 105/376 (27%), Gaps = 34/376 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP+Y  D++ +   +          G+ L  A+K      +   +   +DG   +S  E
Sbjct: 37  GTPFYAYDRRLMTRRVAALRQTLPE-GIALHYAIKANPMPAVVQHMAGQVDGLDVASAGE 95

Query: 63  VMLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           + +           ++      D E+ A ++   TI   + ++L +    A+K+  +  +
Sbjct: 96  LRVALDAGVSAADISFAGPGKTDDELAAAVAAGITINLESATELERLAAIAEKIGHRPHV 155

Query: 121 RINPSVS-YSKFILADPNRPFSRLGEKCK------DKIESEIKNVNGLMFHNNCENKSFL 173
            +  +     K      +      G   +       +I +   +  G    +  +N    
Sbjct: 156 AVRVNPDFELKTSGMKMSGGAKPFGVDAEAVPALLKRIAALDVHFRGFHIFSGSQNLRAE 215

Query: 174 CFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227
                                  +E +++GGG          +     + E  E      
Sbjct: 216 ALVEAQGLTLDLALRLADDAPGPVEMLNIGGGFGIPYFPGDRRLDLAPVSEQLEARLPAV 275

Query: 228 -------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-------- 272
                  +I LE G  +V         V+D   +     +V +    H            
Sbjct: 276 RERLPGVEIILELGRYLVGEAGIYVAKVVDRKVSRGRTFLVTNGGLHHHLAASGNFGQVI 335

Query: 273 --LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                         +   T  V G  C   DI  +     P + GD I       Y    
Sbjct: 336 RKNYPVAVGNRMDASASETVDVVGPLCTPLDILAQQVDLPPAQPGDWIVVYQSGAYGYTA 395

Query: 331 K-NWFNGINMPTIAVK 345
               F G   P   + 
Sbjct: 396 SPTRFLGHPEPLELLV 411


>gi|162174|gb|AAA30218.1| ornithine decarboxylase [Trypanosoma brucei]
 gi|4104937|gb|AAD02222.1| ornithine decarboxylase [Trypanosoma brucei gambiense]
 gi|261335419|emb|CBH18413.1| ornithine decarboxylase, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 445

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 67/383 (17%), Positives = 118/383 (30%), Gaps = 33/383 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+++ D   ++   +T         V    A+KC   W +  TL     G   +S  E+ 
Sbjct: 59  PFFVADLGDIVRKHETWKKCLPR--VTPFYAVKCNDDWRVLGTLAALGTGFDCASNTEIQ 116

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                    E   Y    K         +    +          K        K+ LRI+
Sbjct: 117 RVRGIGVPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHPKAKMVLRIS 176

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S ++  L+              ++ +    +V G+ FH    +     F+  + +  
Sbjct: 177 TDDSLARCRLSVKFGAKVEDCRFILEQAKKLNIDVTGVSFHVGSGSTDASTFAQAISDSR 236

Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRL------KEFSEKYSVQIYLEPG 234
             F         +  + +GGG   T       +    +      K F     + I  EPG
Sbjct: 237 FVFDMGTELGFNMHILDIGGGFPGTRDAPLKFEEIAGVINNALEKHFPPDLKLTIVAEPG 296

Query: 235 EAIVTNTTTLNTTVLDIS-------------------ENIKNLVIVDSSVEAHVPDYLLY 275
              V +  TL   V+                              V  S    + D+ + 
Sbjct: 297 RYYVASAFTLAVNVIAKKVTPGVQTDVGAHAESNAQSFMYYVNDGVYGSFNCILYDHAVV 356

Query: 276 QESATI--YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
           +        PN   Y + V G +C   D   E ++   +++G+ + FED+  Y +   + 
Sbjct: 357 RPLPQREPIPNEKLYPSSVWGPTCDGLDQIVERYYLPEMQVGEWLLFEDMGAYTVVGTSS 416

Query: 334 FNGINMPTIAVKNVDGTIKAIRE 356
           FNG   PTI           +RE
Sbjct: 417 FNGFQSPTIYYVVSGLPDHVVRE 439


>gi|163783584|ref|ZP_02178574.1| ornithine decarboxylase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881204|gb|EDP74718.1| ornithine decarboxylase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 390

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 52/360 (14%), Positives = 117/360 (32%), Gaps = 22/360 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP  L+D + +        Y        +  A+K      +   L +   G   +S  
Sbjct: 37  VDTPALLMDLEGVKTRFVDVRYHLPEVN--VFYAVKANDHIDILRALAEVGAGFEVASSE 94

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKI 118
           E+          E    +   K  +               ++  +++K    A +    +
Sbjct: 95  ELGKVLSLGVQPERVISSNPVKPLDFIDYAYGVGVNRFAVDSFPEVDKIARAAPRARVYV 154

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFS 176
            L +    S          +    +    +    ++ + +   GL FH   +  +   + 
Sbjct: 155 RLTVPNEGSEW----PLSRKFGVDVNTAVEILEYAKNRGLVPIGLTFHVGSQCNNLRNWF 210

Query: 177 AMLKNIEKEFGH---FITQIEWISLGGGIHFTD-----KDYPVKDFCQ-RLKEFSEKYSV 227
             +K   + +        ++  +++GGGI             +  + +  L+++      
Sbjct: 211 IAIKRSAQLWEAARLKGIRLLVLNMGGGIPVRYLQESLSVEDIAYYVRGLLRKYFPTSPY 270

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286
           ++ +EPG  IV +   +   V+  +    +N + +D+ V   + + L      T     G
Sbjct: 271 ELQIEPGRGIVGDQGIMVVGVVGTATRGEENWLYIDTGVFNGLAEALGGIRYPTYLKREG 330

Query: 287 P-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
                ++ G SC + D+  +  F     +GDR+       Y       FNG   P +   
Sbjct: 331 ELKEWVIGGISCDSMDVVAKRVFLPEPAVGDRLFILSAGAYTTVYGANFNGFPPPKVICL 390


>gi|219853015|ref|YP_002467447.1| Orn/DAP/Arg decarboxylase 2 [Methanosphaerula palustris E1-9c]
 gi|219547274|gb|ACL17724.1| Orn/DAP/Arg decarboxylase 2 [Methanosphaerula palustris E1-9c]
          Length = 404

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 64/366 (17%), Positives = 117/366 (31%), Gaps = 29/366 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ID +K+  N            V++  A+K  +   +  TL         +S+ E
Sbjct: 40  GTPIFVIDHEKIRQNYREFREHL--PDVQVYFAVKANSNPEIVKTLFDMGCSFDVASMPE 97

Query: 63  VMLGHEKFGG-----------ETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKDK 110
            M+ +E               +   Y    K  E           + F+   +L K +  
Sbjct: 98  FMVVYENIKDLPDKERQEWIWDKIIYANTIKPIETIEALNQYKPLVTFDNSEELKKIRTY 157

Query: 111 AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170
           A      + +R+  + S  +        P   +    +      +    GL FH   +  
Sbjct: 158 APHAGLVLRIRVPNTGSMVELSSKFGAEPGEAVDLISEAFAMGLVT--EGLSFHVGSQCT 215

Query: 171 SFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDY--PVKDFCQRLKEFSEK 224
           +F  +   L+               +I  + +GGG                +RL    E+
Sbjct: 216 NFDNYVQALELSANIIEEVETRTGQKIRILDIGGGFPVRYHPEVKSFHLLARRLNTEIER 275

Query: 225 YS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--DYLLYQESA 279
                +QI  EPG  +V N  TL + V+  +          +    H        +    
Sbjct: 276 LFPPDMQILAEPGRFLVANACTLVSKVIGKAFRDGKPGYYINDGVYHTYSGQVFDHNTYP 335

Query: 280 TIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +    G    + V G +C A D          ++I D +  E++  Y+I    +FNG  
Sbjct: 336 VLAFKEGETQISAVFGPTCDAFDTITLSAELPDLEINDLVYSENIGAYSIASSTYFNGFP 395

Query: 339 MPTIAV 344
            P   +
Sbjct: 396 -PATVL 400


>gi|11514289|pdb|1D7K|A Chain A, Crystal Structure Of Human Ornithine Decarboxylase At 2.1
           Angstroms Resolution
 gi|11514290|pdb|1D7K|B Chain B, Crystal Structure Of Human Ornithine Decarboxylase At 2.1
           Angstroms Resolution
          Length = 421

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 66/392 (16%), Positives = 122/392 (31%), Gaps = 41/392 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       +++    V    A+ C  +  +  TL     G   +S  E+ L
Sbjct: 34  FYVADLGDILK--KHLRWLKALPRVTPFYAVXCNDSKAIVKTLAATGTGFDCASKTEIQL 91

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        +N    +    S++   K        K+ LRI  
Sbjct: 92  VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 151

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       R      ++ +    +V G+ FH          F   + +   
Sbjct: 152 DDSKAVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARC 211

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     V+I  EPG 
Sbjct: 212 VFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSDSGVRIIAEPGR 271

Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270
             V +  TL   ++                          +++ +           AHV 
Sbjct: 272 YYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVK 331

Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
             L  +           Y++ + G +C   D   E      + +GD + FE++  Y +  
Sbjct: 332 PLLQKRPKPDERY----YSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAA 387

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
            + FNG   PTI         + +++F   D+
Sbjct: 388 ASTFNGFQRPTIYYVMSGPAWQLMQQFQNPDF 419


>gi|316932414|ref|YP_004107396.1| Orn/DAP/Arg decarboxylase 2 [Rhodopseudomonas palustris DX-1]
 gi|315600128|gb|ADU42663.1| Orn/DAP/Arg decarboxylase 2 [Rhodopseudomonas palustris DX-1]
          Length = 380

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 48/357 (13%), Positives = 110/357 (30%), Gaps = 27/357 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D + + +N             ++  A+K   A  +   L         +S+ E+ 
Sbjct: 21  PCLVVDLEVVRDNFMHFAKAL--PDSRVFYAIKANPAPEVLSLLASLGSCFDCASVQEIQ 78

Query: 65  LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +        +  ++      +     A          +  +++ K    A     K+  R
Sbjct: 79  MALAAGATPDRISFGNTIKKERDIARAYELGIRLFSVDCTAEVEKIARVA--PGSKVFCR 136

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           I    + +++ L+        +     D  +       G+ FH   + +    +   L  
Sbjct: 137 ILYDCAGAEWPLSRKFGCDPEMAVDVLDVAKRLGLEAYGISFHVGSQQRKVKAWDRALAM 196

Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIYLE 232
             + F         +  +++GGG                +   + L++       +  +E
Sbjct: 197 AAQVFRDCAERGINLSMVNMGGGFPTKYLKEVPPVVQYGRSIFRALRKHFGNQIPETIIE 256

Query: 233 PGEAIVTNTTTLNTTVLDI-----SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287
           PG  +V N   + T V+ I      +  + + +                  A    + G 
Sbjct: 257 PGRGMVGNAGVIETEVVLISKKSDDDETRWVYLDIGKFGGLAETMDESIRYAIKSRHDGA 316

Query: 288 Y--TAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338
                ++ G +C + D+  E   +     ++IGD++  E    Y        FNG  
Sbjct: 317 EMTPCVLAGPTCDSADVLYEKLPYPLPVTLEIGDKLLIEGTGAYTSTYSAVAFNGFP 373


>gi|325981750|ref|YP_004294152.1| Ornithine decarboxylase [Nitrosomonas sp. AL212]
 gi|325531269|gb|ADZ25990.1| Ornithine decarboxylase [Nitrosomonas sp. AL212]
          Length = 391

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 53/351 (15%), Positives = 116/351 (33%), Gaps = 17/351 (4%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+ L+D   +       +       V    A+K      +   L     G   +S+ E+ 
Sbjct: 42  PFLLVDSTIIRRKAQRFIAAMPR--VHPHYAVKANPDARVLSALIDEGVGFEIASIAELD 99

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           L  +         Y+   K             +  + +++ +L K    + K   K+ LR
Sbjct: 100 LLLKLGVPAAEIFYSNPMKSRAYIEYAAAKGVEWYVLDSIEELRKI--VSVKPDAKMYLR 157

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           I+     S + LA           +   +      ++ G+ FH   + ++   +   ++ 
Sbjct: 158 IDTPNIGSDWPLAGKFGTHLADINEIIHEAVRLKADLAGVTFHVGSQCRNPQNWRVGIER 217

Query: 182 IEKEFGHF---ITQIEWISLGGGIH--FTDKDYPVKDFCQRLKEFSEKYS--VQIYLEPG 234
            +K F            +++GGG           ++   + + E        +++  EPG
Sbjct: 218 AKKVFAEMRRVGLNPRLLNVGGGYPVRHIKPIPSIEIIAEVINEAIADLPESIRVMAEPG 277

Query: 235 EAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-YTAMV 292
             +V+++      V+  +    K  +  D+ +   V +         +    G      +
Sbjct: 278 RYLVSDSAYFVCRVVGTATRNGKRWMYWDAGMFGGVIEMTEGLRYEILTDREGNNIPWSI 337

Query: 293 CGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
            G +C + DI          ++ GD I   +   Y     + FNG  +P +
Sbjct: 338 AGPTCDSVDILMHELMLPNNMQEGDFIYIPNAGAYTTAYASNFNGFPLPDV 388


>gi|168465929|ref|ZP_02699799.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|195631146|gb|EDX49706.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
          Length = 465

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 77/418 (18%), Positives = 136/418 (32%), Gaps = 57/418 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+Y+  + +++ N+             K   A K  +  G+   +        ++S Y
Sbjct: 45  PTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQY 104

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK-- 116
           EV    E  F G+   +N   K           D   I  +++ +L      ++KL K  
Sbjct: 105 EVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVA 164

Query: 117 KIGLRINPSVSYSKF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170
            + +R+ P+V  +          A       +  E C+  +     ++ GL  H   +  
Sbjct: 165 NVCVRVEPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMHVGDQVP 224

Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPV--------------- 211
               F+   K +  E          + + I++GGGI    K                   
Sbjct: 225 ESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDDENGDPLKDNMYAGITA 284

Query: 212 KDFCQRLKEFSEKYSVQ--IYLEPGEAIVTNTTTLNTTV----------------LDISE 253
           +DF   +     K+     I +EPG  +  +   L T V                  +  
Sbjct: 285 QDFADAVIREVHKWRTDVEICIEPGRKVTGSAAVLLTEVSCEKRKTNYDLNGNVECHVEW 344

Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF------GEFH 307
              +      S   H  D+  Y  +A+           + G  C  GD F       EF 
Sbjct: 345 KFVDAGYSVLSDSQHF-DWFFYVYNASRMTAAHDAWIKLAGPLCDGGDYFHMGVKGEEFL 403

Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364
             K   +GD ++F D   Y I  +  +N      + + + +G  + IR   SY D   
Sbjct: 404 LPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVMMIDKNGETRLIRREDSYEDMVK 461


>gi|73979735|ref|XP_856595.1| PREDICTED: similar to Ornithine decarboxylase (ODC) isoform 6
           [Canis familiaris]
          Length = 467

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 65/389 (16%), Positives = 117/389 (30%), Gaps = 47/389 (12%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       +++    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 40  FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSRTIVKTLAAIGTGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        SN    +    S++   K        K+ LRI  
Sbjct: 98  VQSLGVPPERIIYANPCKQVSQIKYASNNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++      +V G+ FH          F   + +   
Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERARELNIDVIGVSFHVGSGCTDPETFVQAISDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     V++  EPG 
Sbjct: 218 VFDMGAEVGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPADSGVRVIAEPGR 277

Query: 236 AIVTNTTTLNTTVL-------------------------------DISENIKNLVIVDSS 264
             V +  TL   ++                                +++ +         
Sbjct: 278 YYVASAFTLAVNIIAKKLVLKEQTGSDDYSAFLDEDESSEQTFMYYVNDGVYGSFNCILY 337

Query: 265 VEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
             AHV   L  +       +   Y+  + G +C   D   E      + +GD + FE++ 
Sbjct: 338 DHAHVKPLLQKRPKP----DEKYYSTSIWGPTCDGLDRIVERCDLPEIHVGDWMLFENMG 393

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKA 353
            Y +   + FNG   PTI       T + 
Sbjct: 394 AYTVAAASTFNGFQRPTIYYVMSGPTWQL 422


>gi|257456760|ref|ZP_05621944.1| decarboxylase, pyridoxal-dependent family [Treponema vincentii ATCC
           35580]
 gi|257445766|gb|EEV20825.1| decarboxylase, pyridoxal-dependent family [Treponema vincentii ATCC
           35580]
          Length = 395

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 54/376 (14%), Positives = 111/376 (29%), Gaps = 31/376 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TP  +I+  ++  N          A   +  A+K      +   L +       +S Y
Sbjct: 22  LETPCVVINLDRIKKNYLELKNFFSTAD--IYYAVKANPHEEVLKLLIELGANFDIASRY 79

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+          +  +Y    K  +  A            ++   L      A K H  +
Sbjct: 80  ELDKILALGISPDRLSYGNTIKKAKDIAYFYEKGIRLFATDSKEDLKNLAKYAPKSHVYV 139

Query: 119 GLRINPSVSY-SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
            + +  + S            P            +       G+ FH   + +    +  
Sbjct: 140 RILVENTNSADWPLSRKFGCHPDMAYDLCI--LAKELGLIPYGISFHVGSQQRDIGQWDD 197

Query: 178 MLKNIEKEF----GHFITQIEWISLGGGIHFTDK------DYPVKDFCQRLKEFSEKYSV 227
            +   +            +++ I++GGG   +             +  + L +       
Sbjct: 198 AIAKTKYLMSSLEEEEDIELKMINMGGGFPASYVVPTNELSEYASEINRYLDDDFGDERP 257

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATI- 281
           +I LEPG ++V N   L T V+ +S          + +        V       +   I 
Sbjct: 258 RIILEPGRSMVGNAGVLVTEVITVSRKNNTALQRWVYVDAGVFNGLVETLNESIKYPIIT 317

Query: 282 ---YPNTGPYTAMVCGRSCLAGDIF---GEFHFEKPVKIGDRISFEDVAGYNINRKN-WF 334
                 +     ++ G +C + DI     ++     +K GDR+ F     Y     +  F
Sbjct: 318 SKDTNCSKRGEVILAGPTCDSMDIMYEKYKYQLPINLKPGDRVYFLSAGAYTATYASVEF 377

Query: 335 NGINMPTIAVKNVDGT 350
           NG       +   +  
Sbjct: 378 NGFPPLKTYIMKNEKK 393


>gi|322835361|ref|YP_004215387.1| Orn/DAP/Arg decarboxylase 2 [Rahnella sp. Y9602]
 gi|321170562|gb|ADW76260.1| Orn/DAP/Arg decarboxylase 2 [Rahnella sp. Y9602]
          Length = 435

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 43/398 (10%), Positives = 101/398 (25%), Gaps = 37/398 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y     ++  +         +  +    +LK      +   LN+   G    SL 
Sbjct: 28  VPTPFYAYSASQIKADFSALKKSLPDE-IHYFYSLKANPNKTLVQLLNREGTGCEVCSLA 86

Query: 62  EVMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+     +    E   +     Y              ++  ++ ++    D A  +    
Sbjct: 87  ELETVISQGVPPEDIIFVGPGKYIAELTQCCRIGIKAVVIESIEEIKLLNDIAASMGVIQ 146

Query: 119 GLRINPSVS-YSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
            + +  +     +      +    + G   +   ++           + G+  +      
Sbjct: 147 TIALRINPEFTGEKAKLVMSGKPRQFGIDEQLLPQAFACVAQQENLRLAGIHIYLGTRIL 206

Query: 171 SFL----CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF--------CQRL 218
            +         +L         +    +++ +GGG      D                 +
Sbjct: 207 DWQALAKNTLNILSLAGSLQEIYKVDFDFVDVGGGFGVRYFDKEKPLDIVALGGALAPVI 266

Query: 219 KEFSEKYS-VQIYLEPGEAIVTNTTTLNTTVLD----------ISENIKNLVIVDSSVEA 267
           + + +K+   +I +E G  ++       T V            + +   N     + + +
Sbjct: 267 RNYHDKFPRCKIIVELGRYLIARAGIFVTRVNYLKPSRDEWFAVCDGGANCHGSAAGINS 326

Query: 268 HVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
            +                  +   V G  C   DI GE      +  GD I       Y 
Sbjct: 327 LIRRNFPMA-RLGETRAGTQHRYQVTGPLCTPTDILGENIMLAELHPGDLIGIGHSGAYG 385

Query: 328 INRKN-WFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            +     F     P   +             S      
Sbjct: 386 ASASPVNFLSFGHPAEILVEKGQAFLIRTADSIETLLA 423


>gi|269928458|ref|YP_003320779.1| diaminopimelate decarboxylase [Sphaerobacter thermophilus DSM
           20745]
 gi|269787815|gb|ACZ39957.1| diaminopimelate decarboxylase [Sphaerobacter thermophilus DSM
           20745]
          Length = 445

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 52/390 (13%), Positives = 113/390 (28%), Gaps = 39/390 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP YL     +L  L+          V++  ++K   +  +   L +   G   +S  E
Sbjct: 38  GTPCYLYHGGVVLEQLERVRAAV-GPDVEVAYSVKANPSLALTQLLARAGAGAEVASAGE 96

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKAQKLHKKIG 119
           + L        E   +    K  +                ++ ++ +    A+   + +G
Sbjct: 97  LHLALAAGVDPERIVFAGPGKTEDELRRAVRAGIFAVNVESLGEIERLARVAEGEGRDVG 156

Query: 120 LRINPSVSYS-KFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCENKS 171
           + +  + +              ++ G    D   +           + GL  +   +   
Sbjct: 157 VGLRINPAQPLIGSHMRMGGRPTQFGVDEADLERAVALVESKPRLRLRGLHVYTATQVFD 216

Query: 172 ----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
                     +     +        +E I  GGG         + + +  F    +   +
Sbjct: 217 ADALVEHARNVFDLAARVADAAGRPLEMIDFGGGFGIPYFEHLEPFDLDRFGAGFRPLLD 276

Query: 224 KYSV-------QIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLY 275
           +          +  LE G  +V       T V+D+ ++  K  V+ D  +  H+     +
Sbjct: 277 ERLSDPRLAGARFILELGRYLVAEAGVYLTRVVDVKQSWGKTFVVTDGGMNHHISATGNW 336

Query: 276 -----QESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
                +    +  +  P        + G  C   D+FG        + GD I       Y
Sbjct: 337 GQVFRKPYPILNVSADPAAALEQTDLVGPCCTPLDMFGTDIQMALPQPGDIIGVFLSGAY 396

Query: 327 NINRKNW-FNGINMPTIAVKNVDGTIKAIR 355
             +  +  F     P   +    G +  +R
Sbjct: 397 GYSVSSLKFLSHPEPAEVLVWQ-GEVHILR 425


>gi|86148471|ref|ZP_01066761.1| carboxynorspermidine decarboxylase [Vibrio sp. MED222]
 gi|85833768|gb|EAQ51936.1| carboxynorspermidine decarboxylase [Vibrio sp. MED222]
          Length = 301

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 129/297 (43%), Positives = 184/297 (61%), Gaps = 3/297 (1%)

Query: 73  ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFI 132
           ETHAY+V Y + ++  V   CD +IFN+ SQL  ++   +     +GLR+NP VSY+   
Sbjct: 1   ETHAYSVGYSEDDVREVADICDKMIFNSQSQLAAYRHIVED-RASLGLRLNPGVSYAGQD 59

Query: 133 LADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQ 192
           LA+P R FSRLG +           +NG+MFH NCENK    F  +L +I K+FG  + +
Sbjct: 60  LANPARQFSRLGVQADHIKPEIFDEINGVMFHMNCENKDVDAFIGLLDSISKQFGEHLDK 119

Query: 193 IEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDIS 252
           ++W+S+GGG+ FT   Y ++     LK FSEK+ VQ+YLEPGEAI+T TT L  TV+DI 
Sbjct: 120 LDWVSMGGGVFFTWSGYDIEKLGLALKAFSEKHGVQMYLEPGEAIITKTTDLVVTVVDIV 179

Query: 253 ENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLAGDIFGEFHFEK 310
           EN+K   IVDS+ EAH  D L+Y E A++      G +  ++   SCLAGD F E  F++
Sbjct: 180 ENVKKTAIVDSATEAHRLDTLIYNEPASVLEASENGSHGYVIGSCSCLAGDQFCEASFDE 239

Query: 311 PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367
           P+KIG ++   D AGY + + NWFNG+ MP+I     +G ++ + EF Y D+  +LS
Sbjct: 240 PLKIGQKLHLLDSAGYTMVKLNWFNGLKMPSIYCDRSNGEVQKLNEFGYEDFKRSLS 296


>gi|115397981|ref|XP_001214582.1| ornithine decarboxylase [Aspergillus terreus NIH2624]
 gi|114192773|gb|EAU34473.1| ornithine decarboxylase [Aspergillus terreus NIH2624]
          Length = 443

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 54/354 (15%), Positives = 109/354 (30%), Gaps = 25/354 (7%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D  ++        +      V+   A+KC     +   + +  +G   +S  E+ L
Sbjct: 72  FYVADMGEVYR--QHMRWKMNLGRVRPFYAVKCNPDPEILRLMAKLGNGFDCASKAEIDL 129

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       Y    K        +          +    +K KA     ++ LRI  
Sbjct: 130 ALATGVDPARIIYAQPCKTKSYLRYAAQKGVKQMTFDNADELYKIKACFPDAELYLRILT 189

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S S   L+        +  +  +        V G+ FH     +    F   +++   
Sbjct: 190 DDSTSLCRLSMKFGASLDVAHQLLELARDLELKVVGVSFHVGSGAEDPSAFLKAVQDARL 249

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            F        ++  + +GGG      +       + L  +   +  +I  EPG   V + 
Sbjct: 250 VFDQAADLGHELHTLDVGGGFTGETFEKFAGVLSEALDTYFPPHV-RIIAEPGRYYVASA 308

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY------------- 288
            TL   V+   +        + +   ++ D +    S  I+ +  P              
Sbjct: 309 FTLAANVIARRDVRDPEDPNNDAYMIYLNDGVYGNFSNIIFDHQHPVAQILTCANGPNAA 368

Query: 289 ----TAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGI 337
                  + G +C   D+  +       + +GD + FE++  Y       FNG 
Sbjct: 369 TSGIAYSIWGPTCDGIDVITQRITLPGLLDVGDWLFFEEMGAYTRCSATRFNGF 422


>gi|126330479|ref|XP_001381469.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 510

 Score =  164 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 55/358 (15%), Positives = 103/358 (28%), Gaps = 24/358 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           + + D   L     T   +     V    A+KC  +  +   L     G   +S  E+  
Sbjct: 29  FMVADLGVLAEQHKTFQQMLPR--VTPFFAVKCNNSSSVLRVLANLGTGFDCASRGELEQ 86

Query: 66  G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       Y    K        ++    +     +    K        ++ LR+  
Sbjct: 87  VLRMGIAPTRIIYANTCKQISHLQYAASHGVQLMTFDCEEEIAKIAKFHPTARLVLRLWT 146

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S S F L+                 +     V G  FH     ++   F+  + +   
Sbjct: 147 QDSESLFPLSTKFGAPLDQCGHLLTLAKDLGVIVVGACFHVGSGCQTPQSFNKAIADARH 206

Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYP-VKDFCQRLKEFSEKYSVQ-----IYLEPGE 235
            F         +  + +GGG        P  ++    +    ++Y  +     I  EPG 
Sbjct: 207 VFDLGLQIGHPMSLLDIGGGFPGKKNFVPTFEEMAAVINIALDQYFPEGSGVEIIAEPGR 266

Query: 236 AIVTNTTTLNTTVLDISEN--------IKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287
              T   T    ++   +         +  L     +  A +      +    +      
Sbjct: 267 FYGTKVCTSALNIIGKKDVVEQGGRKLMYYLNDGFYTSFAAIRREKETRIPHVVKKFNCK 326

Query: 288 ---YTAMVCGRSCLAGDIFG-EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
              Y + + G +C A D  G        + +GD + FED+  Y     + FNG + P 
Sbjct: 327 PLLYPSTLWGPTCDAFDRLGPTDVLLPELHVGDWLIFEDMGAYTYTISSNFNGFSRPE 384


>gi|149640407|ref|XP_001508498.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
          Length = 854

 Score =  164 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 50/362 (13%), Positives = 111/362 (30%), Gaps = 27/362 (7%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           + + D  +L+      L       V    A+KC  +     TL     G   +S  E+  
Sbjct: 441 FLVADLGELVRRHRGFLRALPR--VTPFYAVKCNNSPWALQTLKNLGTGFDCASQGELEQ 498

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             E         Y    K        ++    +    ++    K         + LRI  
Sbjct: 499 VLELGVPAARIIYANPCKQTSHIQFAASHGVRLMTFDNEGELTKVAKFHPTASMVLRIKT 558

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S S   L++             +   +    V G+ FH     ++   F   +++  +
Sbjct: 559 EDSESLAQLSEKFGAPLESCPCLLEAARALGVAVVGVSFHVGSGCQNSQTFRRAIEDAHR 618

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYP-VKDFCQRLKEFSEKYSVQ-----IYLEPGE 235
            F        ++  + +GGG    +   P  ++  + +    +++  +     +  EPG+
Sbjct: 619 VFEMGRQEGHEMRLLDIGGGFPGNESFVPTFEEMAEVINSSLDRHFPEGSGVELIAEPGK 678

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-------- 287
               +       ++   E ++           ++ + +     +       P        
Sbjct: 679 YYAMSVCRAAVNIIAKREVVEEGGSGSKRFMYYMNNGVYGSFQSFALEKIEPKPIVMKKI 738

Query: 288 ------YTAMVCGRSCLAGDIFG-EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                 Y   + G +C   D    +      + +GD + FE++  Y +   + FNG   P
Sbjct: 739 SSELPVYPCSLWGPTCDNLDKITQDDIPLPELDVGDWLMFENMGAYTVTLTSAFNGFPAP 798

Query: 341 TI 342
            +
Sbjct: 799 PV 800


>gi|291408922|ref|XP_002720724.1| PREDICTED: ornithine decarboxylase 1-like [Oryctolagus cuniculus]
          Length = 443

 Score =  164 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 54/360 (15%), Positives = 101/360 (28%), Gaps = 26/360 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+ + D   L     T        GV    ++KC  +  +   L     G   +S  E+ 
Sbjct: 66  PFMVADLDVLARRHQTFCQAL--PGVLTFYSVKCNNSPWVLRVLAALGTGFDCASQVEME 123

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                        Y    K        +     +    S+    K        ++ LR+ 
Sbjct: 124 QVLGLGVAPSRIIYANPCKSISHIQYAARHGVRLLTFDSEEELIKVAQHHPGARLVLRLW 183

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S S F L+                       V G+ FH     ++   ++  + + +
Sbjct: 184 TQDSQSIFPLSAKFGASLEACGHLLTSARDLGLAVVGVSFHVGSSCQTPTSYAQAITHCQ 243

Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKD------FCQRLKEFSEKYSVQIYLEPG 234
           + F         +  + LGGG    +   P+ +           + F E   V++  EPG
Sbjct: 244 QVFEMGRGAGHDMSLLDLGGGFPGAEGSQPLFEELVKGIKAALAQTFPEGSGVEVIAEPG 303

Query: 235 EAIVTNTTTLNTTVLD----------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
                   T    ++                        S    + +             
Sbjct: 304 RFYAEPVFTAAVNIIAKKSVLEPGGRRKFVYYLNDGHYGSFRVFLREPAPRIPIVVKEFR 363

Query: 285 TGP--YTAMVCGRSCLAGD-IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
           + P  +   + G +C A D +F        + +GD + F  +  Y  +  + FNG   P 
Sbjct: 364 SEPPLFPCTLYGPTCDAFDRLFVAELQLPELDVGDWLVFPSMGAYTSSMSSTFNGFP-PA 422


>gi|34810213|pdb|1NJJ|A Chain A, Crystal Structure Determination Of T. Brucei Ornithine
           Decarboxylase Bound To D-Ornithine And To G418
 gi|34810214|pdb|1NJJ|B Chain B, Crystal Structure Determination Of T. Brucei Ornithine
           Decarboxylase Bound To D-Ornithine And To G418
 gi|34810215|pdb|1NJJ|C Chain C, Crystal Structure Determination Of T. Brucei Ornithine
           Decarboxylase Bound To D-Ornithine And To G418
 gi|34810216|pdb|1NJJ|D Chain D, Crystal Structure Determination Of T. Brucei Ornithine
           Decarboxylase Bound To D-Ornithine And To G418
          Length = 425

 Score =  164 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 67/383 (17%), Positives = 118/383 (30%), Gaps = 33/383 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+++ D   ++   +T         V    A+KC   W +  TL     G   +S  E+ 
Sbjct: 39  PFFVADLGDIVRKHETWKKCLPR--VTPFYAVKCNDDWRVLGTLAALGTGFDCASNTEIQ 96

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                    E   Y    K         +    +          K        K+ LRI+
Sbjct: 97  RVRGIGVPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHPKAKMVLRIS 156

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S ++  L+              ++ +    +V G+ FH    +     F+  + +  
Sbjct: 157 TDDSLARCRLSVKFGAKVEDCRFILEQAKKLNIDVTGVSFHVGSGSTDASTFAQAISDSR 216

Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRL------KEFSEKYSVQIYLEPG 234
             F         +  + +GGG   T       +    +      K F     + I  EPG
Sbjct: 217 FVFDMGTELGFNMHILDIGGGFPGTRDAPLKFEEIAGVINNALEKHFPPDLKLTIVAEPG 276

Query: 235 EAIVTNTTTLNTTVLDIS-------------------ENIKNLVIVDSSVEAHVPDYLLY 275
              V +  TL   V+                              V  S    + D+ + 
Sbjct: 277 RYYVASAFTLAVNVIAKKVTPGVQTDVGAHAESNAQSFMYYVNDGVYGSFNCILYDHAVV 336

Query: 276 QESATI--YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
           +        PN   Y + V G +C   D   E ++   +++G+ + FED+  Y +   + 
Sbjct: 337 RPLPQREPIPNEKLYPSSVWGPTCDGLDQIVERYYLPEMQVGEWLLFEDMGAYTVVGTSS 396

Query: 334 FNGINMPTIAVKNVDGTIKAIRE 356
           FNG   PTI           +RE
Sbjct: 397 FNGFQSPTIYYVVSGLPDHVVRE 419


>gi|39933947|ref|NP_946223.1| ornithine decarboxylase [Rhodopseudomonas palustris CGA009]
 gi|192289366|ref|YP_001989971.1| ornithine decarboxylase [Rhodopseudomonas palustris TIE-1]
 gi|39647794|emb|CAE26314.1| putative ornithine decarboxylase [Rhodopseudomonas palustris
           CGA009]
 gi|192283115|gb|ACE99495.1| Ornithine decarboxylase [Rhodopseudomonas palustris TIE-1]
          Length = 380

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 49/355 (13%), Positives = 111/355 (31%), Gaps = 23/355 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D + + +N             ++  A+K   A  +   L         +S+ E+ 
Sbjct: 21  PCLVVDLEVVRDNFMHFAKAL--PDSRVFYAIKANPAPEVLSLLASLGSCFDCASVQEIQ 78

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +        +  ++    K     A        +F+        K        K+  RI 
Sbjct: 79  MALAAGATPDRISFGNTIKKERDIARAYELGIRLFSVDCTPEVEKVARAAPGSKVFCRIL 138

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              + +++ L+        +     D  +       G+ FH   + +    +   L    
Sbjct: 139 YDCAGAEWPLSRKFGCDPEMAVDVLDNAKRLGLEAYGISFHVGSQQRKVKAWDRALAMAA 198

Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIYLEPG 234
           + F         +  +++GGG                +   + L++       +  +EPG
Sbjct: 199 QVFRDCAERGISLSMVNMGGGFPTKYLKEVPPVVQYGRSIFRALRKHFGNQIPETIIEPG 258

Query: 235 EAIVTNTTTLNTTVLDI-----SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY- 288
             +V N   + T V+ I      ++++ + +                  A    + G   
Sbjct: 259 RGMVGNAGVIETEVVLISKKSDEDDVRWVYLDIGKFGGLAETMDESIRYAIKSRHDGAEM 318

Query: 289 -TAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338
              ++ G +C + D+  E   +     ++IGD++  E    Y     +  FNG  
Sbjct: 319 TPCVLAGPTCDSADVLYEKMPYPLPVTLEIGDKLLIEGTGAYTSTYSSVAFNGFP 373


>gi|150021213|ref|YP_001306567.1| Orn/DAP/Arg decarboxylase 2 [Thermosipho melanesiensis BI429]
 gi|149793734|gb|ABR31182.1| Orn/DAP/Arg decarboxylase 2 [Thermosipho melanesiensis BI429]
          Length = 386

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 53/358 (14%), Positives = 116/358 (32%), Gaps = 18/358 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP  ++D   +  N +  +   +N+  ++  A+K  +   +   L         +S  E
Sbjct: 18  GTPVLVMDLNIVKANYEKLIDNVRNS--RVYYAVKANSHIEILKLLRDLGSYFDVASRPE 75

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
           +          E  ++    K  +  +   N        ++  ++ K  D A      + 
Sbjct: 76  IEKLLSIGVEPERMSFGNTIKKTKDISFAYNNGIRMFAVDSEMEIEKIADNAPGSDIYVR 135

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +  N     + + L            K          N  G+ FH   +N +   +   +
Sbjct: 136 ISTNGMEDDADWPLTRKFGTSVDHAIKLVKYAVDLELNPIGVSFHVGSQNYNPDNWRVAI 195

Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKY---SVQIYL 231
           + +   F         +  ++ GGG+          V++  + + +    Y   +  + L
Sbjct: 196 REVSVVFEEARKMGIDMYMVNTGGGMPVKYSRNIPSVEEISEVINKAIVDYIGENTLVVL 255

Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLL----YQESATIYPNTGP 287
           EPG ++V +   + T+V+  S+  +   +   +   H     +    Y+           
Sbjct: 256 EPGRSMVGSAGAMVTSVILRSKKGEENWVYTDAGIFHGLTETIQNIRYEVEVIGRELEEK 315

Query: 288 YTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344
              ++ G +C + D+          V I D I   +   Y       FNGI  P +  
Sbjct: 316 GKFVLAGPTCDSVDVMYYDIELAKNVTIDDLIVLYNTGAYTTEYSTNFNGIEPPKVVF 373


>gi|114568958|ref|YP_755638.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein
           [Maricaulis maris MCS10]
 gi|114339420|gb|ABI64700.1| aspartate kinase [Maricaulis maris MCS10]
          Length = 857

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 56/359 (15%), Positives = 110/359 (30%), Gaps = 25/359 (6%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66
           Y+ D + +         ++     +   A+K      M  T  +   G    S+ EVM  
Sbjct: 504 YVYDLETVKTRASAVAGLKGLD--RGWYAMKANGHPDMIRTAVEAGLGVECVSINEVMAA 561

Query: 67  HEKFGG---ETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
            +       +   +   +    E    L     +  + +  L  + +      +KI LRI
Sbjct: 562 RKAVPDLPVDRILFTPNFAPRAEYAQALELGIHLTLDGLHPLRAWPEI--FSGRKITLRI 619

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSFLCFS 176
           NP              P ++ G    + +E+          +NGL  H+         + 
Sbjct: 620 NPQRPEGHHKHVRTAGPEAKFGLHADELVEARDLAKKAGAIINGLHVHSGSGISDPDHWR 679

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-----VQIYL 231
            +      +    +  +E + LGGG+   +     +     L +            Q+++
Sbjct: 680 RVG-LFLVDTARDMPDVEILDLGGGLSVDEASGVRRIDMDALDQVLTDLKTAHPKYQLWI 738

Query: 232 EPGEAIVTNTTTLNTTVLDISENIK-NLVIVDSSVEAHVPDYLLYQESATI----YPNTG 286
           EPG  I   +  L   V  +        V +++ + + +   L       +       + 
Sbjct: 739 EPGRYISAESGVLLARVTQLKHTPDARFVGINTGMNSLIRPALYGARHEIVNLTRLDESP 798

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
            Y A + G  C   D  G        + GD I   +   Y     + +N       AV 
Sbjct: 799 AYVADIVGPICETADRLGAQRLMPETEEGDIILIANGGAYGRVMASSYNMREPAGEAVI 857


>gi|217977341|ref|YP_002361488.1| Orn/DAP/Arg decarboxylase 2 [Methylocella silvestris BL2]
 gi|217502717|gb|ACK50126.1| Orn/DAP/Arg decarboxylase 2 [Methylocella silvestris BL2]
          Length = 376

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 52/357 (14%), Positives = 107/357 (29%), Gaps = 27/357 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   +  N  +          ++  A+K      + + L +      ++S+ EV 
Sbjct: 17  PCLVLDLDVVRENYVSFASAM--PDTRVYYAVKANPDPRVLELLAKLGSCFDTASVVEVE 74

Query: 65  LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                    +  ++      +     A          +  +++ K    A        L 
Sbjct: 75  AALASGATADRISFGNTIKKERDIKRAYELGVRLFAVDCEAEVEKIARAAPGSKVFCRLL 134

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
                  +++ L+        L  +  +          GL FH   + ++   +   LK 
Sbjct: 135 --CDGKGAEWPLSRKFGCDVDLAPRVLEHAHRLGLVAYGLSFHVGSQQRNPAMWDGALKA 192

Query: 182 IEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLE 232
               F   G     ++ ++LGGG                    Q L++    +  +  +E
Sbjct: 193 ASAIFNDLGERGIALQMVNLGGGFPTRYLKEVPAVRAYAQSIMQSLRKHFGNHIPETIIE 252

Query: 233 PGEAIVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287
           PG  +V N   +   V+ IS          + +                         G 
Sbjct: 253 PGRGMVGNAGVIEAEVVLISRKSDDDVVKWVYLDIGKFNGLAETMDEMIRYPIRTSFDGD 312

Query: 288 YT--AMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338
            T   ++ G SC + D+  E   +H    ++IG ++  E    Y     +  FNG  
Sbjct: 313 ETEPCVLAGPSCDSVDVLYEKDPYHLPVSLEIGAKVLIEGTGAYTTTYSSVGFNGFP 369


>gi|6573538|pdb|1QU4|A Chain A, Crystal Structure Of Trypanosoma Brucei Ornithine
           Decarboxylase
 gi|6573539|pdb|1QU4|B Chain B, Crystal Structure Of Trypanosoma Brucei Ornithine
           Decarboxylase
 gi|6573540|pdb|1QU4|C Chain C, Crystal Structure Of Trypanosoma Brucei Ornithine
           Decarboxylase
 gi|6573541|pdb|1QU4|D Chain D, Crystal Structure Of Trypanosoma Brucei Ornithine
           Decarboxylase
 gi|11513499|pdb|1F3T|A Chain A, Crystal Structure Of Trypanosoma Brucei Ornithine
           Decarboxylase (Odc) Complexed With Putrescine, Odc's
           Reaction Product.
 gi|11513500|pdb|1F3T|B Chain B, Crystal Structure Of Trypanosoma Brucei Ornithine
           Decarboxylase (Odc) Complexed With Putrescine, Odc's
           Reaction Product.
 gi|11513501|pdb|1F3T|C Chain C, Crystal Structure Of Trypanosoma Brucei Ornithine
           Decarboxylase (Odc) Complexed With Putrescine, Odc's
           Reaction Product.
 gi|11513502|pdb|1F3T|D Chain D, Crystal Structure Of Trypanosoma Brucei Ornithine
           Decarboxylase (Odc) Complexed With Putrescine, Odc's
           Reaction Product
          Length = 425

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 67/383 (17%), Positives = 118/383 (30%), Gaps = 33/383 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+++ D   ++   +T         V    A+KC   W +  TL     G   +S  E+ 
Sbjct: 39  PFFVADLGDIVRKHETWKKCLPR--VTPFYAVKCNDDWRVLGTLAALGTGFDCASNTEIQ 96

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                    E   Y    K         +    +          K        K+ LRI+
Sbjct: 97  RVRGIGVPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHPKAKMVLRIS 156

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S ++  L+              ++ +    +V G+ FH    +     F+  + +  
Sbjct: 157 TDDSLARCRLSVKFGAKVEDCRFILEQAKKLNIDVTGVSFHVGSGSTDASTFAQAISDSR 216

Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRL------KEFSEKYSVQIYLEPG 234
             F         +  + +GGG   T       +    +      K F     + I  EPG
Sbjct: 217 FVFDMGTELGFNMHILDIGGGFPGTRDAPLKFEEIAGVINNALEKHFPPDLKLTIVAEPG 276

Query: 235 EAIVTNTTTLNTTVLDIS-------------------ENIKNLVIVDSSVEAHVPDYLLY 275
              V +  TL   V+                              V  S    + D+ + 
Sbjct: 277 RYYVASAFTLAVNVIAKKVTPGVQTDVGAHAESNAQSFMYYVNDGVYGSFNCILYDHAVV 336

Query: 276 QESATI--YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
           +        PN   Y + V G +C   D   E ++   +++G+ + FED+  Y +   + 
Sbjct: 337 RPLPQREPIPNEKLYPSSVWGPTCDGLDQIVERYYLPEMQVGEWLLFEDMGAYTVVGTSS 396

Query: 334 FNGINMPTIAVKNVDGTIKAIRE 356
           FNG   PTI           +RE
Sbjct: 397 FNGFQSPTIYYVVSGLPDHVVRE 419


>gi|7404357|sp|P07805|DCOR_TRYBB RecName: Full=Ornithine decarboxylase; Short=ODC
 gi|162175|gb|AAA30219.1| ornithine decarboxylase [Trypanosoma brucei]
          Length = 423

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 67/383 (17%), Positives = 118/383 (30%), Gaps = 33/383 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+++ D   ++   +T         V    A+KC   W +  TL     G   +S  E+ 
Sbjct: 37  PFFVADLGDIVRKHETWKKCLPR--VTPFYAVKCNDDWRVLGTLAALGTGFDCASNTEIQ 94

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                    E   Y    K         +    +          K        K+ LRI+
Sbjct: 95  RVRGIGVPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHPKAKMVLRIS 154

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S ++  L+              ++ +    +V G+ FH    +     F+  + +  
Sbjct: 155 TDDSLARCRLSVKFGAKVEDCRFILEQAKKLNIDVTGVSFHVGSGSTDASTFAQAISDSR 214

Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRL------KEFSEKYSVQIYLEPG 234
             F         +  + +GGG   T       +    +      K F     + I  EPG
Sbjct: 215 FVFDMGTELGFNMHILDIGGGFPGTRDAPLKFEEIAGVINNALEKHFPPDLKLTIVAEPG 274

Query: 235 EAIVTNTTTLNTTVLDIS-------------------ENIKNLVIVDSSVEAHVPDYLLY 275
              V +  TL   V+                              V  S    + D+ + 
Sbjct: 275 RYYVASAFTLAVNVIAKKVTPGVQTDVGAHAESNAQSFMYYVNDGVYGSFNCILYDHAVV 334

Query: 276 QESATI--YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
           +        PN   Y + V G +C   D   E ++   +++G+ + FED+  Y +   + 
Sbjct: 335 RPLPQREPIPNEKLYPSSVWGPTCDGLDQIVERYYLPEMQVGEWLLFEDMGAYTVVGTSS 394

Query: 334 FNGINMPTIAVKNVDGTIKAIRE 356
           FNG   PTI           +RE
Sbjct: 395 FNGFQSPTIYYVVSGLPDHVVRE 417


>gi|56553801|pdb|1SZR|C Chain C, A Dimer Interface Mutant Of Ornithine Decarboxylase
           Reveals Structure Of Gem Diamine Intermediate
 gi|56553802|pdb|1SZR|D Chain D, A Dimer Interface Mutant Of Ornithine Decarboxylase
           Reveals Structure Of Gem Diamine Intermediate
 gi|56553803|pdb|1SZR|A Chain A, A Dimer Interface Mutant Of Ornithine Decarboxylase
           Reveals Structure Of Gem Diamine Intermediate
 gi|56553804|pdb|1SZR|B Chain B, A Dimer Interface Mutant Of Ornithine Decarboxylase
           Reveals Structure Of Gem Diamine Intermediate
          Length = 425

 Score =  163 bits (413), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 68/383 (17%), Positives = 119/383 (31%), Gaps = 33/383 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+++ D   ++   +T         V    A+KC   W +  TL     G   +S  E+ 
Sbjct: 39  PFFVADLGDIVRKHETWKKCLPR--VTPFYAVKCNDDWRVLGTLAALGTGFDCASNTEIQ 96

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                    E   Y    K         +    +          K        K+ LRI+
Sbjct: 97  RVRGIGVPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHPKAKMVLRIS 156

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S ++  L+              ++ +    +V G+ FH    +     F+  + +  
Sbjct: 157 TDDSLARCRLSVKFGAKVEDCRFILEQAKKLNIDVTGVSFHVGSGSTDASTFAQAISDSR 216

Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRL------KEFSEKYSVQIYLEPG 234
             F         +  + +GGG   T       +    +      K F     + I  EPG
Sbjct: 217 FVFDMGTELGFNMHILDIGGGFPGTRDAPLKFEEIAGVINNALEKHFPPDLKLTIVAEPG 276

Query: 235 EAIVTNTTTLNTTVLDI-------------------SENIKNLVIVDSSVEAHVPDYLLY 275
              V +  TL   V+                     S        V  S    + D+ + 
Sbjct: 277 RYYVASAFTLAVNVIAKAVTPGVQTDVGAHAESNAQSFMYYVNDGVYGSFNCILYDHAVV 336

Query: 276 QESATI--YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
           +        PN   Y + V G +C   D   E ++   +++G+ + FED+  Y +   + 
Sbjct: 337 RPLPQREPIPNEKLYPSSVWGPTCDGLDQIVERYYLPEMQVGEWLLFEDMGAYTVVGTSS 396

Query: 334 FNGINMPTIAVKNVDGTIKAIRE 356
           FNG   PTI           +RE
Sbjct: 397 FNGFQSPTIYYVVSGLPDHVVRE 419


>gi|288957461|ref|YP_003447802.1| ornithine decarboxylase [Azospirillum sp. B510]
 gi|288909769|dbj|BAI71258.1| ornithine decarboxylase [Azospirillum sp. B510]
          Length = 382

 Score =  163 bits (413), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 50/366 (13%), Positives = 113/366 (30%), Gaps = 37/366 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP  +ID   +  N +           ++  A+K   A  +   L +       +S+ E
Sbjct: 15  QTPCLVIDLDVVEQNYNDLHDAL--PDARIFYAVKANPAAEILGLLARLGSAFDCASVPE 72

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + +        +  ++      +     A         F++  +L K +  A        
Sbjct: 73  IQMALAAGATPDRISFGNTIKKEGDIRRAYELGVRLFAFDSEPELEKIERAAPGARVFCR 132

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177
           +      S          +    L       +++   +V   G+ FH   + K  + +  
Sbjct: 133 ILT----SGEGAEWPLSRKFGCDLAMARALLLKARDMDVQPYGVSFHVGSQQKDLMQWDH 188

Query: 178 MLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQ 228
            +  + + F         +  I+LGGG     +    +           L+     +  +
Sbjct: 189 AIFQVAQLFRELEVLGVDLGMINLGGGFPTRYRTDVPECTAYGQAIFDSLRTHFGNHLPE 248

Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQ---- 276
             +EPG  +V +   + + V+ +S            ++          + + + Y     
Sbjct: 249 TIVEPGRGMVGSAGIIESEVVLVSRKSAEDAKRWVYLDIGKFGGLAETMDEAIQYPIEVL 308

Query: 277 -ESATIYPNTGPYTAMVCGRSCLAGDIF---GEFHFEKPVKIGDRISFEDVAGYNINRKN 332
            + A    +      ++ G +C + D+     E+     +K GDR+       Y      
Sbjct: 309 GDEAIDGQDDDREAVILAGPTCDSADVLYERAEYRMPMGLKAGDRVRIHATGAYTTTYSA 368

Query: 333 W-FNGI 337
             FNG 
Sbjct: 369 VCFNGF 374


>gi|159036153|ref|YP_001535406.1| Orn/DAP/Arg decarboxylase 2 [Salinispora arenicola CNS-205]
 gi|157914988|gb|ABV96415.1| Orn/DAP/Arg decarboxylase 2 [Salinispora arenicola CNS-205]
          Length = 417

 Score =  163 bits (412), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 53/394 (13%), Positives = 100/394 (25%), Gaps = 33/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ +   +               + +  +LK      +   L     G   SSL E
Sbjct: 12  GTPLFVYEADTVAAQYTGLRQRLH-PAMDIFYSLKANPNLALCGHLRSLGAGAEVSSLLE 70

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
           +    E         +    K  E      +     II  +  +L    D A++   +  
Sbjct: 71  LTTAREAGVPPGDIVFPGPGKSREEITACLDAQIYAIICESFEELELVNDLARERGVRAR 130

Query: 120 LRINPSVS-YSKFILADPNRPFSRLGEKCKDK-----IESEIKNVNGLMFHNNCENKS-- 171
           + +  + +   K           + G           +      V G+  +         
Sbjct: 131 VALRVNPAFAVKGSGLTMGGKPRQFGIDEAHLFALPGLRLAHLRVVGVHVYLGTRILDET 190

Query: 172 --FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---------KE 220
                   +L+  E+   H    +E++ +GGG+     D       +RL           
Sbjct: 191 VIAENTRRILELAERLAAHLDFPLEFVDVGGGLGVAYFDGERDLAVERLTDLVNPVVADF 250

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-HVPDYLLYQE-- 277
                  ++ +E G  +V    T    V  +  ++     V       H+    +     
Sbjct: 251 HDRHRDTRLIMELGRYLVAPAGTYLIRVRYVKSSMGERFAVTDGGTHQHMAAVGIGSFVK 310

Query: 278 -----SATIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                     P  GP     V G  C   D          ++ GD +       Y  +  
Sbjct: 311 RDFPLRLLGRPTDGPLVRWTVTGPLCTPNDTLVRAAELPDLRRGDLLGVLRSGAYGPSAS 370

Query: 332 NW-FNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              F G   P   +                D   
Sbjct: 371 PTLFLGHGHPAEVLVRNGVGCLVRHRDQVADLLR 404


>gi|289209688|ref|YP_003461754.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Thioalkalivibrio sp. K90mix]
 gi|288945319|gb|ADC73018.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Thioalkalivibrio sp. K90mix]
          Length = 416

 Score =  163 bits (412), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 47/375 (12%), Positives = 100/375 (26%), Gaps = 34/375 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+Y  D+Q +   +           + +  A+K      +   +   +DG   +S  E+
Sbjct: 43  TPFYAYDRQVMTRRVQALRQALPR-DLSIHYAIKANPMPAVVGHMASLVDGLDVASGREL 101

Query: 64  MLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            +           ++        E++  ++   TI   + ++L +    A++  +   + 
Sbjct: 102 QIALDAGVSAADISFAGPGKSPAELEMAVAAGITIHLESDTELTRVAAIAERTGRTPCVA 161

Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174
           +  +     K      +      G   +        I     +  G       +N     
Sbjct: 162 VRVNPDFELKTSGMKMSGGPKVFGVDAERVPEMLGRIGELGLHFRGFHIFAGSQNLRAES 221

Query: 175 FSAML----KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY----- 225
                        +   H    +E +++GGG                + E  E+      
Sbjct: 222 LVEAQGLTLDLALRLADHAPGSVETLNIGGGFGIPYFPGDQPLTLGPIAEQLERRLPEVR 281

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY--------- 272
                 ++ LE G  +V         VLD   +   + +V +    H             
Sbjct: 282 ARMPQAEVILELGRYLVGEAGVYVAEVLDRKVSRGRVFLVTNGGLHHHLAASGNFGQVIR 341

Query: 273 -LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                               + G  C   D+ G+       +IGD +       Y     
Sbjct: 342 KNYPVAIGNRMGEAASEVVDIVGPLCTPLDVLGQQVELPRAEIGDLVVVFQSGAYGYTAS 401

Query: 332 NW-FNGINMPTIAVK 345
              F     P   + 
Sbjct: 402 PRGFLSHPEPAEILV 416


>gi|182412516|ref|YP_001817582.1| Orn/DAP/Arg decarboxylase 2 [Opitutus terrae PB90-1]
 gi|177839730|gb|ACB73982.1| Orn/DAP/Arg decarboxylase 2 [Opitutus terrae PB90-1]
          Length = 379

 Score =  163 bits (412), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 57/372 (15%), Positives = 117/372 (31%), Gaps = 34/372 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +++D   L     T         +++  A+K      +  TL Q       +S+ E
Sbjct: 15  GTPLFIVDHDALRKAYRTFRKHLPR--IQVYYAVKANPDPAIVRTLFQEGASFDVASMPE 72

Query: 63  VMLGHEKFGG------------ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK 110
            M+ HE                +    N       ++ +      + F+ + ++ K K  
Sbjct: 73  FMIVHENIKRLPAKERQEWIWDKIIYANPTKPTETLEELNQYKPLVTFDNLEEIQKIKQH 132

Query: 111 AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK---NVNGLMFHNNC 167
           A      + L++      +   + + +  F     +  D I    K    V G+ FH   
Sbjct: 133 APNAGLVLRLKV-----PNTGAMVELSSKFGASPGEAVDLILEADKAGLGVEGISFHVGS 187

Query: 168 ENKSFLCFSAMLKNIEKEFGHFIT----QIEWISLGGGIHFTDKD--YPVKDFCQRLKEF 221
           +  +F  +   L      F         ++  + +GGG      D   P +   + +   
Sbjct: 188 QTTNFENYVQALNLSANIFQEARERGYTKMNLLDIGGGFPAPYDDTVKPFEMLAKVINTE 247

Query: 222 SEKYSVQIYL---EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPD--YLLYQ 276
            ++   +      EPG  +   + T    V+  +          +    H        + 
Sbjct: 248 LDRLFPKEIQILAEPGRFLAAVSGTSVAKVIGKAVRDGKTCYYINDGVYHTYSGVIFDHC 307

Query: 277 ESATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +        GP +   V G +C A D+         ++ GD +   ++  Y+     +FN
Sbjct: 308 KYPVKAFKKGPTSLCSVFGPTCDALDVVSMAENLPDLQRGDFVYSVNIGAYSHASATYFN 367

Query: 336 GINMPTIAVKNV 347
           G     +   N 
Sbjct: 368 GFPPAKVVHVNQ 379


>gi|114705385|ref|ZP_01438293.1| ornithine decarboxylase [Fulvimarina pelagi HTCC2506]
 gi|114540170|gb|EAU43290.1| ornithine decarboxylase [Fulvimarina pelagi HTCC2506]
          Length = 377

 Score =  163 bits (412), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 45/363 (12%), Positives = 106/363 (29%), Gaps = 26/363 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   +  N +       ++   +  A+K   A  +   L         +S+ E+ 
Sbjct: 18  PCLVVDLDVVKENFNAFRKALPDSA--IFYAVKANPAPEILKLLASLGSNFDCASVAEIK 75

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +      G +  ++    K     A        +F         K        ++  R+ 
Sbjct: 76  MALAAGVGPDRISFGNTIKKERDVAAADALGVSLFAVDCIEEVEKVARAAPAARVFCRVL 135

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
                +++ L+        +                G+ FH   +      + A + + +
Sbjct: 136 TDGEGAEWPLSRKFGCMPAMAIDVLTHARDLGLRATGISFHVGSQQTDTNAWDAAIGDAK 195

Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPG 234
             F         +  +++GGG                    + LK+       +  +EPG
Sbjct: 196 FVFEALERRGINLTLVNMGGGFPTRYLKDVPTAQAYGHAIFESLKKHFGNRLPETIIEPG 255

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPNTG 286
             +V +   +   V+ +S+           ++          + + + Y           
Sbjct: 256 RGMVGDAGVIKAEVVLVSKKSDTDENRWVYLDIGKFGGLAETMDEAIRYPIRTRH-DGGA 314

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRKNW-FNGI-NMPT 341
               ++ G +C + D+  E         + IGD +  E    Y     +  FNG   + +
Sbjct: 315 TEPCVLAGPTCDSADVLYEKKPYPLPLALTIGDEVLIEGTGAYTTTYASVAFNGFEPLAS 374

Query: 342 IAV 344
             +
Sbjct: 375 YVI 377


>gi|269140449|ref|YP_003297150.1| putative diaminopimelate decarboxylase [Edwardsiella tarda EIB202]
 gi|267986110|gb|ACY85939.1| putative diaminopimelate decarboxylase [Edwardsiella tarda EIB202]
 gi|304560241|gb|ADM42905.1| Diaminopimelate decarboxylase [Edwardsiella tarda FL6-60]
          Length = 465

 Score =  163 bits (412), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 75/418 (17%), Positives = 140/418 (33%), Gaps = 57/418 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR-KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+Y+  + +++ N+         +   K   A K  +  G+   +        ++S Y
Sbjct: 45  GTPFYVFSEAEIVRNIREIEQAFSAHPNTKTFFASKTCSVMGVLQAIRDAGICAEANSQY 104

Query: 62  EVMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116
           EV    E  F G+   +N      +    A+ ++   I  +++ +L+     +++L K  
Sbjct: 105 EVRKCLEVGFRGDQIVFNGVVKKPEDLEYAIANDLYLINVDSLYELDHIDAISRRLKKTA 164

Query: 117 KIGLRINPSVSYSKF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170
            + +R+ P+V  +          A       +  E C+  +     ++ GL  H   +  
Sbjct: 165 NVCVRVEPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMHVGDQVP 224

Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDY---------------PV 211
               F+   + +  E            + I++GGGI    K                   
Sbjct: 225 EAEPFAKATRVLVDESRRLEQVLGITFDLINVGGGIPVPYKYDEENGDPLKDNMYAGITA 284

Query: 212 KDFCQRLKEFSEKYSV--QIYLEPGEAIVTNTTTLNTTV----------------LDISE 253
           +DF   +     K+    QI +EPG  +  +   L T V                  +  
Sbjct: 285 QDFADAVISEVHKWRTDVQICIEPGRKVTGSAAVLLTEVACEKRKTNYDVDGNVECHVEW 344

Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF------GEFH 307
              +      S   H  D+  Y  +A+           + G  C  GD F       EF 
Sbjct: 345 KFVDAGYSVLSDSQHF-DWFFYVYNASRITEAHDRYIKLAGPLCDGGDYFHVGVKGEEFL 403

Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364
                 IGD ++F D   Y+I  +  +N      + + +  G  + IR   SY D   
Sbjct: 404 MPHDTAIGDVVAFLDAGAYSIESQTVYNNRPRTAVVMIDRQGNDRLIRREDSYEDMVK 461


>gi|108760390|ref|YP_630578.1| pyridoxal-dependent decarboxylase [Myxococcus xanthus DK 1622]
 gi|108464270|gb|ABF89455.1| decarboxylase, pyridoxal-dependent [Myxococcus xanthus DK 1622]
          Length = 480

 Score =  163 bits (412), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 60/405 (14%), Positives = 114/405 (28%), Gaps = 45/405 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P +++    L  N +  L +      G ++  + K     G+   L+    G    S 
Sbjct: 64  GSPLHVVHMAALRRNAERFLAVPPGRTGGCEVYYSYKTNPVPGVLSFLHGLGVGAEVISA 123

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
           YE+ L  +     E   YN   K      +A+      +  N   ++  F   A +L ++
Sbjct: 124 YEMWLALKLGVPPERIVYNGPVKSEASVREAISRGIQLLAANHAEEIAVFARLAAELDRR 183

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK----SFL 173
             + +  + +                    +    S+  +V GL  H     +       
Sbjct: 184 PRVAVRVTTNSGWSAQFGTPIAGGAALRAYQQARGSKHLDVVGLHAHRGETIRTEGDFTA 243

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGI-------------------------HFTDKD 208
              ++L   +         +E + LGG +                               
Sbjct: 244 FVESVLDFTDTLHQELGLDLEVLDLGGSLNTPTVEHIAERDWRLNLTFFRDVPAPDPAAS 303

Query: 209 YPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV 261
             +  +     E  E +         +I+LEPG A+  +T  L   V  +         V
Sbjct: 304 LSIDRYVALAVEMVETHYARRGRQRPRIFLEPGRAMTGDTQLLLGRVHALKAGEDRTWAV 363

Query: 262 DSSVEAH---VPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRI 318
             +   H   V +                    V G  C  GD          +++GD +
Sbjct: 364 LDAGINHAECVRNEYHQLFHVNRPDAPADKVYTVVGPICTPGDTLYHAKRLPDLRVGDTL 423

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
           +  D   Y +     F     P I            R  +++D  
Sbjct: 424 AIMDAGAYFVPFATSF-SYPQPAIVALEDGKERLLRRAETFDDLV 467


>gi|312377938|gb|EFR24644.1| hypothetical protein AND_10625 [Anopheles darlingi]
          Length = 401

 Score =  163 bits (412), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 62/363 (17%), Positives = 116/363 (31%), Gaps = 25/363 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y++D   ++      +   K   V    A+KC     +  TL         +S  E+ 
Sbjct: 36  PFYVMDIGDIVRKHRQWIE--KMPRVVPHYAVKCNDNEVVCGTLAALGASFDCASKGEIA 93

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                    E   +    K          +   T+ +++ ++L+K K         I +R
Sbjct: 94  KILGLGVAPERIIFANPMKPASHLRYASSNGVKTMTYDSDTELHKIKQYCPDAKLVIRIR 153

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF---SAM 178
                +           P        K    S   +V G+ FH       F  +    + 
Sbjct: 154 CEAEKAQCPLGKKFGCDPVEEAPRLIK-IARSLGLDVIGVSFHVGSGCADFPIYYKAISY 212

Query: 179 LKNIEKEFGHFITQIEWISLGGGIH----FTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
             ++ +           + +GGG       +  +          + F +K +V++  EPG
Sbjct: 213 AHDLFEYAAQLGYTFNLLDIGGGFPGDTGTSIDEVSTIVNAALEQFFPDKAAVRVISEPG 272

Query: 235 EAIVTNTTTLNTTVLDIS------------ENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
              V++  TL T V                        V +S    + D+ + +      
Sbjct: 273 RYYVSSAFTLVTNVQSKRICLNARTGAIDRMMYYLNDGVYASFNCILYDHQIPRPKLIGG 332

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
                Y + + G +C A D   E      ++I D + FE++  Y I   + FNG  +P I
Sbjct: 333 QTGKQYNSTIWGPTCDALDQLIETIALPELQIDDWVVFENMGAYTIPVASPFNGFELPKI 392

Query: 343 AVK 345
              
Sbjct: 393 YCY 395


>gi|117621391|ref|YP_855811.1| ornithine decarboxylase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|117562798|gb|ABK39746.1| ornithine decarboxylase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 383

 Score =  163 bits (412), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 54/361 (14%), Positives = 111/361 (30%), Gaps = 16/361 (4%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P  L+DK  +               V+L  ALK      +   L +       ++  E
Sbjct: 18  GSPLLLLDKAAVRKQYRALAAAL--PDVRLHYALKPLPHEAVVSVLKEEGACFDLATNGE 75

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           V L   +        +    K              +F   + L   K    K   K+ LR
Sbjct: 76  VDLVRSQGVRPGRCIHTHPIKRDSDIRYALEYGCTVFVYDNPLELEKFIPYKDEVKLLLR 135

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           ++     +K  L+                  ++   V GL FH   +          +  
Sbjct: 136 VSFPNPETKVDLSKKFGCTPEQALPLLQLAHAKGIKVMGLSFHVGSQVPHARRHVQAIDA 195

Query: 182 IEKEFG---HFITQIEWISLGGGIHFTDK--DYPVKDFCQRLKEFSEKYSVQI--YLEPG 234
             +          +   + +GGG     +  ++ +  FC  ++E   K    +    EPG
Sbjct: 196 CREIMEQAWELGLKPWVLDIGGGFPVDYEGGEFDIDGFCAPIREALAKLPATVQKIAEPG 255

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGPYT 289
             I     T  ++V+  +     +          S    + D++ Y  S  +      + 
Sbjct: 256 RFISAPAMTSVSSVMGKAHRGDKIWYYLDDGLYGSYNGQLYDHVTYPVSTPLARGE-LHN 314

Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349
           +++ G +C + D+  +      + IG+ +    +  Y     + FN     +I + +   
Sbjct: 315 SVLSGPTCDSVDVIRDGIMLPDLAIGELVVGRVMGAYTWASASTFNFFPKASILILDSSQ 374

Query: 350 T 350
            
Sbjct: 375 K 375


>gi|291533520|emb|CBL06633.1| Diaminopimelate decarboxylase [Megamonas hypermegale ART12/1]
          Length = 372

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 57/357 (15%), Positives = 122/357 (34%), Gaps = 18/357 (5%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP  +I  + +  N +     +    +K+  A+K  +A  + + L +       +S  E+
Sbjct: 20  TPLEVISLEHIEENYNLL--CKHIPRLKVFYAIKANSAKCILEKLIKLGSNFDVASAGEI 77

Query: 64  ML-GHEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            L       GE   Y    K  +  I+A         F++ ++++K K        ++  
Sbjct: 78  RLLSKMGVSGEKMIYANPVKTIEGLIEASKVGIKRFTFDSENEIDKIKKYV--PDAEVLA 135

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+    S +   L               +  ++     NG+ FH   +  S   +     
Sbjct: 136 RVKIKQSDAIVNLNIKFGADETKILDLLNYAKANGLKANGICFHVGSQVLSTKSYERAFS 195

Query: 181 NIE---KEFGHFITQIEWISLGGGIH--FTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPG 234
                          I+++ +GGG+     DKD   +   + + +    +   +++ EPG
Sbjct: 196 LARGLIDRLKASGLDIKYMDIGGGLPVACLDKDVDAEKIMKSINDCLADFEDVEVWAEPG 255

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGPYT 289
             I  +   + T+++      +            S    + D+  Y   +    +     
Sbjct: 256 RYICGSAVNVITSIIGKQMRDEKQWYYIDDGIYGSFSGILFDHWDYDIISLKDEDNTYEK 315

Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
           A + G SC + DI  +  +   +  GD +   +   Y+      FNG ++P      
Sbjct: 316 ATIAGPSCDSLDIVKKEMYCPKLDEGDLLIALNAGAYSKVSATTFNGFSLPKTVALE 372


>gi|260654439|ref|ZP_05859929.1| lysine/ornithine decarboxylase [Jonquetella anthropi E3_33 E1]
 gi|260631072|gb|EEX49266.1| lysine/ornithine decarboxylase [Jonquetella anthropi E3_33 E1]
          Length = 410

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 57/366 (15%), Positives = 114/366 (31%), Gaps = 33/366 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P  ++  ++   N  T         VKL  A+K   A  +  T      G   +++ E
Sbjct: 52  GSPLVVLSLKQAEQNYRTLSDWLNR--VKLHYAMKSNPAEPLLKTFADLGSGFDVATIGE 109

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +    +         Y    K     A           +++ +++ K    A      + 
Sbjct: 110 IKTLLQLGVDPSRLIYANPTKPENWIAQAWKLGVTRFTYDSPAEVGKI--AANAPGASVW 167

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           LR+  +   +   L                  +S+  +V GL FH   + +    +   L
Sbjct: 168 LRVRIANPGALVNLNSKFGASQADALDLLQLAKSKGLDVAGLSFHVGSQTRDSGPYLNSL 227

Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKD--FCQRLKEFSEKYSVQIYL--E 232
               + F         +  + +GGG    +  Y +       ++++  E    +  L  E
Sbjct: 228 AVCRRIFNEAAEMGVPLRSLDIGGGFPIVELGYDIDQETMDSQIRDELEDLFPETELLAE 287

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT--- 289
           PG A+   T  L T+V+                   + D  +Y   + I  +   +    
Sbjct: 288 PGRALCGTTANLITSVIGKQVRDGQDWY--------ILDDGIYGTFSGILFDRWDFELLS 339

Query: 290 --------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                   +   G SC + D+         +++GDR+       Y       FNG ++  
Sbjct: 340 AKTGPLYLSTFAGPSCDSLDVLFRDRSTPELEVGDRLVVPACGAYTSASATTFNGFSLTP 399

Query: 342 IAVKNV 347
           I +   
Sbjct: 400 IVIWEE 405


>gi|330892355|gb|EGH25016.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. mori str.
           301020]
          Length = 376

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 57/368 (15%), Positives = 94/368 (25%), Gaps = 30/368 (8%)

Query: 29  GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG-HEKFGGETHAYNVAY-KDCEI 86
             K   A+K      +   L +   G   SS  E+ L       G    +      D E 
Sbjct: 7   NFKNFFAVKATPNPRIMQILKEEGMGMDCSSAAELELCERLGIRGRDIMFTSNNTPDEEF 66

Query: 87  DAVLSNCDTIIFNTVSQLNKFKDKAQKLH-KKIGLRINPSVSYSKFILADPNRPFSRLGE 145
               S    +  +    + +      K          N S    +      +   S+ G 
Sbjct: 67  VKSCSMGAILNIDDYEHITRLDVLEIKPELVSFRYLPNSSGEERQGNQIIGSPKESKFGI 126

Query: 146 KCKDKIE----SEIKNVNGLMFHNNCENK------SFLCFSAMLKNIEKEFGHFITQIEW 195
                       + +NV     H    +              M    ++   H    IE+
Sbjct: 127 TDDRIFHCFAAMKKRNVKRFGLHTMLASNERNAAFFIETARIMFDLAKRISEHLSIDIEF 186

Query: 196 ISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY-----------LEPGEAIVTNTTTL 244
           I+LGGG+         +     +     +   Q +           +E G  I      L
Sbjct: 187 INLGGGLGIPQHPTDSEIDIDLVGSEVGRLYTQYFHSEDGITPDIYMENGRYITGPAGVL 246

Query: 245 NTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY--TAMVCGRSCLAGDI 302
            T V  ++   K  V VD+S+   +   L          N         V G  C   D 
Sbjct: 247 LTKVRHVTSKHKRFVGVDASMADFMRPALYKDYHHVTVLNDSKELIKCDVTGSLCENNDK 306

Query: 303 FGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI----KAIREFS 358
           F            D +   D   +  +    +NG       +    G         R   
Sbjct: 307 FAIDRELPRCSRDDLLIIHDTGAHGYSMGFSYNGKTKSPEVLMRSKGEHFELELIRRREQ 366

Query: 359 YNDYYNNL 366
            +D +  L
Sbjct: 367 TSDLFATL 374


>gi|209154586|gb|ACI33525.1| Ornithine decarboxylase 1 [Salmo salar]
          Length = 456

 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 61/383 (15%), Positives = 113/383 (29%), Gaps = 34/383 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       + R    V    A+KC  +  +  TL     G   +S  E+ +
Sbjct: 38  FYVCDLSDVLK--KHMRWARAMPRVTPFYAVKCNDSRTVVTTLASLGAGFDCASKTEIQI 95

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       Y    K        S     +    S +   K      + K+ LRI  
Sbjct: 96  VQSLGVDASRIIYANPCKQVSQIKYASAHGVQMMTFDSDVELMKVARCHDNAKLVLRIAT 155

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++ +    NV G+ FH          +S  + +   
Sbjct: 156 DDSKAVCQLSVKFGATMKACRGLLERAKELGLNVIGVSFHVGSGCTDPDTYSQAISDARC 215

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     ++I  EPG 
Sbjct: 216 VFDMGAEVGFNMTLLDIGGGFPGSEDTKLKFEEITAVINPALDKYFPADSGIRIIAEPGR 275

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVE-----AHVPDYL-----------LYQESA 279
             V +  TL   V+     +      D   +       +                     
Sbjct: 276 YYVASAYTLAVNVIAKKVIMNEQSASDEDDDWTSDRTLMYYVNDGVYGSFNCILYDHAHP 335

Query: 280 TIYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
               +  P      Y   + G +C   D   E      +++G+ + FE++  Y +   + 
Sbjct: 336 LPTLHKKPKPDERMYPCSIWGPTCDGLDRIAEVCTLPDMQVGEWLLFENMGAYTVAASST 395

Query: 334 FNGINMPTIAVKNVDGTIKAIRE 356
           FNG   P I         + I++
Sbjct: 396 FNGFQKPDIYYIMSRTAWQCIQQ 418


>gi|297617721|ref|YP_003702880.1| ornithine decarboxylase [Syntrophothermus lipocalidus DSM 12680]
 gi|297145558|gb|ADI02315.1| Ornithine decarboxylase [Syntrophothermus lipocalidus DSM 12680]
          Length = 369

 Score =  163 bits (411), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 62/357 (17%), Positives = 117/357 (32%), Gaps = 17/357 (4%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP  ++ ++++              GVK+  A+K  A   +  T+ ++ D     S  E
Sbjct: 17  GTPLMVVSRREIGEKFAILNDYL--PGVKMYYAVKANAHPDVLKTVKEFTDRFDICSPQE 74

Query: 63  VMLGHE-KFGGE--THAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           ++         E   H   V   +    AV       +F+   +L KFK     ++  + 
Sbjct: 75  ILAAKSIGVQSENMIHTNPVKKPEDIRFAVEQGVRWFVFDNEYELEKFKPYGSDVNLLLR 134

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           L                  P    G   K         V GL FH   +N +   ++  +
Sbjct: 135 LSFPNPDCVVNLSYKYGVPPDEATGLVIKAA--EMGLAVRGLCFHVGSQNLNPYKYTDAI 192

Query: 180 KNIEKEFGH---FITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYSVQI--YLE 232
              ++ F         ++++ +GGG          P++ F   ++E  + Y   I    E
Sbjct: 193 AECKRVFNSLALHGIYLDFLDIGGGFPVEYIEPIMPLRRFFSPIQEALDSYFPNITVIAE 252

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP---YT 289
           PG  I+ +   L  TV+  S+                    LY     +  +        
Sbjct: 253 PGRFIIGDAVNLVMTVVGKSKRNNVWWYYVDDGLYGSFSGRLYDHCDYLILSEREGPREQ 312

Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
            ++ G +C + D+         ++IGD +    +  Y     + FNG       V +
Sbjct: 313 CIIAGPTCDSFDVIYHNTVMPQLEIGDTLIALSMGAYTAASASNFNGYPPARTVVVD 369


>gi|328886304|emb|CCA59543.1| Diaminopimelate decarboxylase [Streptomyces venezuelae ATCC 10712]
          Length = 432

 Score =  163 bits (411), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 58/403 (14%), Positives = 107/403 (26%), Gaps = 42/403 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP+YL D   L   +           ++   +LK      +   L+ +       S+ E
Sbjct: 20  GTPFYLYDGDALEGRMRALREAFD-PRLEFFFSLKSNPNIAVCALLHAHGARAEVCSMTE 78

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQK--LHKK 117
           ++         E   +    K  +  A   +     ++  +  +L    + A++  +   
Sbjct: 79  LLTARQAGVAPEDIIFLGPGKSRDEIAACLDEGISALVCESTQELALIDELARERGVRAP 138

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNN----------- 166
           + LR+NP+ S     L        + G      +                          
Sbjct: 139 VALRVNPAFSVKGSGLTMG-GKPRQFGIDEAQLLADPDLAARHPHVRLMGVQVYMGTRIL 197

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE--- 223
            E       + +    E+        +E + +GGG+     D         L        
Sbjct: 198 SEQSVVENSTRIFDLAERLSAALGFPLELVDIGGGLGVAYFDGENDLDLSVLATDLNPVL 257

Query: 224 ------KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY----- 272
                   S ++ +E G  +     T    V  +  ++     V      H         
Sbjct: 258 AGFADRHPSTRLVMELGRYLTAEAGTYVLRVRYVKTSLGENFAVTDGGTHHHMAAVGIGS 317

Query: 273 -----LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
                   +  +     TG  T  V G  C   D   +     P+  GD +  +    Y 
Sbjct: 318 FVKRNFPMRLLSGAGEETGTETWNVTGPLCTPNDTLAKKIQLPPLAPGDLLGVDRSGAYG 377

Query: 328 INRKN-WFNGINMPTIAVKNVDGTIKAIREFS-YNDY--YNNL 366
                  F     P   +  VDG    +RE     D      L
Sbjct: 378 PTASPVNFLSHGYPAEVLV-VDGRAHLVREPDRPADLLSKQRL 419


>gi|296224503|ref|XP_002758083.1| PREDICTED: ornithine decarboxylase [Callithrix jacchus]
          Length = 461

 Score =  163 bits (411), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 63/383 (16%), Positives = 117/383 (30%), Gaps = 41/383 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       +++    V    A+KC  +  + + L     G   +S  E+ L
Sbjct: 40  FYVADLGDILK--KHLRWLKALPRVMPFYAVKCNDSRAIVNALAAIGTGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        +N    +    S++   K        K+ LRI  
Sbjct: 98  VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++ +    +V G+ FH          F   + +   
Sbjct: 158 DDSKAICRLSVKFGATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQAITDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     V+I  EPG 
Sbjct: 218 VFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPSDSEVRIIAEPGR 277

Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270
             V +  TL   ++                          +++ +           AHV 
Sbjct: 278 YYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVK 337

Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
             L  +           Y++ + G +C   D   E      + +GD + FE++  Y +  
Sbjct: 338 PLLQKRPKPD----EKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAA 393

Query: 331 KNWFNGINMPTIAVKNVDGTIKA 353
            + FNG   PTI         + 
Sbjct: 394 ASTFNGFQRPTIYYVMSGPAWQL 416


>gi|254521715|ref|ZP_05133770.1| diaminopimelate decarboxylase, putative [Stenotrophomonas sp.
           SKA14]
 gi|219719306|gb|EED37831.1| diaminopimelate decarboxylase, putative [Stenotrophomonas sp.
           SKA14]
          Length = 864

 Score =  163 bits (411), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 54/365 (14%), Positives = 107/365 (29%), Gaps = 26/365 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+     +         I      +   A+K  +   +   L     G    S  E
Sbjct: 505 GTPRYVYHLPTVRARARALAAI--KPIDQRYYAIKANSHPAILQLLEAEGFGLECVSHGE 562

Query: 63  VMLGHEKFG---GETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           +    +       +   +  ++    E +A  +   T+  + V  L ++ D     ++++
Sbjct: 563 LKHVFQHLPELSPKRVLFTPSFCPRSEYEAAFALGVTVTVDNVEALQRWPDL--FRNREL 620

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCK------DKIESEIKNVNGLMFHNNCENKSF 172
            LR++                 S+ G                   V GL  H     ++ 
Sbjct: 621 WLRVDLGRGEGHHAKVRTGGKDSKFGLPIARVDEFVRAATELGSRVVGLHAHLGSGVETA 680

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-----YSV 227
             +  M   +          ++ I +GGG+     D           E   +      + 
Sbjct: 681 QHWRLMCDELAGFARRIG-SVQTIDIGGGLPIPYSDEDEPFDLDAWAEGLAEVKALHPAF 739

Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----ATIY 282
           ++ +EPG  +V  +  L T     + ++    V +D+ +   +   L          +  
Sbjct: 740 RLAIEPGRYLVAESGVLLTHATQVVEKDGVRRVGLDAGMNTLMRPALYDAWHDIENLSRQ 799

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                    V G  C + D+FG+           D +   D   Y     N +N   MP 
Sbjct: 800 GGYAEAAFDVVGPICESSDVFGKRRKLPVSTAPDDVMLIADAGAYGYVMSNTYNQRAMPR 859

Query: 342 IAVKN 346
             V  
Sbjct: 860 EDVIE 864


>gi|190573193|ref|YP_001971038.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein
           [Stenotrophomonas maltophilia K279a]
 gi|190011115|emb|CAQ44724.1| putative lysine-sensitive aspartokinase III [Stenotrophomonas
           maltophilia K279a]
          Length = 864

 Score =  163 bits (411), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 53/365 (14%), Positives = 108/365 (29%), Gaps = 26/365 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+     +         I      +   A+K  +   +   L     G    S  E
Sbjct: 505 GTPRYVYHLPTVRARARALAAI--KPIDQRYYAIKANSHPAILQLLEAEGFGLECVSHGE 562

Query: 63  VMLGHEKFG---GETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           +    +       +   +  ++    E +A  +   T+  + V  L ++ D     ++++
Sbjct: 563 LKHVFQHLPELSPKRVLFTPSFCPRSEYEAAFALDVTVTVDNVEALQRWPDL--FRNREL 620

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCK------DKIESEIKNVNGLMFHNNCENKSF 172
            LR++                 S+ G                   V GL  H     ++ 
Sbjct: 621 WLRVDLGRGEGHHAKVRTGGKESKFGLPIARVDEFVRAATDLGSRVVGLHAHLGSGVETA 680

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-----YSV 227
             +  M   +          ++ I +GGG+                 E   +      + 
Sbjct: 681 QHWRLMCDELAGFARRIG-SVQTIDIGGGLPIPYSAEDEPFDLDAWAEGLAEVKALHPAF 739

Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----ATIY 282
           ++ +EPG  +V  +  L T     + ++    V +D+ + A +   L          +  
Sbjct: 740 RLAIEPGRYLVAESGVLLTHATQVVEKDGVRRVGLDAGMNALMRPALYDAWHDIENLSRQ 799

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                    V G  C + D+FG+           D +   D   Y  +  N +N   +P 
Sbjct: 800 GGYAEAAFDVVGPICESSDVFGKRRKLPVSTAPDDVMLIADAGAYGYSMANTYNQRMLPR 859

Query: 342 IAVKN 346
             V  
Sbjct: 860 EDVIE 864


>gi|189239038|ref|XP_968571.2| PREDICTED: similar to ornithine decarboxylase [Tribolium castaneum]
          Length = 433

 Score =  162 bits (410), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 63/371 (16%), Positives = 120/371 (32%), Gaps = 24/371 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   ++    T         V+   A+KC  +  + + L     G   +S  E+  
Sbjct: 13  FYVCDVGDIVRKHKTWKAFLPR--VQPHYAVKCNDSLTVLEVLAALGTGFDCASKGEINK 70

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                   +   +    K          +N  T+ F+  ++L+K K+        I +R 
Sbjct: 71  VLSLGVSPDRIIFANPAKPSSHIRHAAATNVSTMTFDNETELHKIKNFHPDSKLVIRIRC 130

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           + + S     +     P        +    S   NV G+ FH     +    F   +   
Sbjct: 131 DATDSQCPLGMKFGCDPVLEAPRLLQTAR-SLNLNVIGVSFHVGSGCREPSVFKRAIAMS 189

Query: 183 EKEFG---HFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
            + F            + +GGG         D   +     L ++    SV+I  EPG  
Sbjct: 190 REVFDLGQALGYNFTLLDIGGGFPGDRGTSLDEIAQVVNSALDDYFPDPSVEIIAEPGRF 249

Query: 237 IVTNTTTLNTTVLDI-----------SENIKNLVIVDSSVEAHVPDYLLYQESA-TIYPN 284
            V++  TL   +  I                    V  S    + D+           P 
Sbjct: 250 YVSSAYTLICNIHSIRDVISEDETTRHRMYYINDGVYGSFNCILYDHQRVVPLPLHEVPG 309

Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344
           +  Y++ + G +C   D   E      + +GD + FE++  Y +   + FNG  +  + V
Sbjct: 310 SKYYSSSIWGPTCDGLDQVVEEVLLPEMGLGDWLVFENMGAYTLPVASPFNGFPVAKVHV 369

Query: 345 KNVDGTIKAIR 355
              +     ++
Sbjct: 370 VADESIWVLLK 380


>gi|270010871|gb|EFA07319.1| hypothetical protein TcasGA2_TC015912 [Tribolium castaneum]
          Length = 456

 Score =  162 bits (410), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 63/371 (16%), Positives = 120/371 (32%), Gaps = 24/371 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   ++    T         V+   A+KC  +  + + L     G   +S  E+  
Sbjct: 36  FYVCDVGDIVRKHKTWKAFLPR--VQPHYAVKCNDSLTVLEVLAALGTGFDCASKGEINK 93

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                   +   +    K          +N  T+ F+  ++L+K K+        I +R 
Sbjct: 94  VLSLGVSPDRIIFANPAKPSSHIRHAAATNVSTMTFDNETELHKIKNFHPDSKLVIRIRC 153

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           + + S     +     P        +    S   NV G+ FH     +    F   +   
Sbjct: 154 DATDSQCPLGMKFGCDPVLEAPRLLQTAR-SLNLNVIGVSFHVGSGCREPSVFKRAIAMS 212

Query: 183 EKEFG---HFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
            + F            + +GGG         D   +     L ++    SV+I  EPG  
Sbjct: 213 REVFDLGQALGYNFTLLDIGGGFPGDRGTSLDEIAQVVNSALDDYFPDPSVEIIAEPGRF 272

Query: 237 IVTNTTTLNTTVLDI-----------SENIKNLVIVDSSVEAHVPDYLLYQESA-TIYPN 284
            V++  TL   +  I                    V  S    + D+           P 
Sbjct: 273 YVSSAYTLICNIHSIRDVISEDETTRHRMYYINDGVYGSFNCILYDHQRVVPLPLHEVPG 332

Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344
           +  Y++ + G +C   D   E      + +GD + FE++  Y +   + FNG  +  + V
Sbjct: 333 SKYYSSSIWGPTCDGLDQVVEEVLLPEMGLGDWLVFENMGAYTLPVASPFNGFPVAKVHV 392

Query: 345 KNVDGTIKAIR 355
              +     ++
Sbjct: 393 VADESIWVLLK 403


>gi|18859145|ref|NP_571876.1| ornithine decarboxylase [Danio rerio]
 gi|9858179|gb|AAG01031.1|AF290981_1 ornithine decarboxylase [Danio rerio]
 gi|18652915|dbj|BAB84694.1| ornithine decarboxylase [Danio rerio]
 gi|28839552|gb|AAH47796.1| Odc1 protein [Danio rerio]
 gi|39645422|gb|AAH63932.1| Ornithine decarboxylase 1 [Danio rerio]
 gi|66911315|gb|AAH97034.1| Odc1 protein [Danio rerio]
 gi|182889558|gb|AAI65342.1| Odc1 protein [Danio rerio]
          Length = 461

 Score =  162 bits (410), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 62/374 (16%), Positives = 118/374 (31%), Gaps = 34/374 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       ++R    +    A+KC  +  +  TL     G   +S  E+ +
Sbjct: 40  FYVADLGDVLK--KHLRWLRVLPRITPFYAVKCNDSRAVVTTLASLGAGFDCASKTEIQI 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       Y    K        S     +    S++   K      + K+ LRI  
Sbjct: 98  VQSVGVDPSRIIYANPCKQVSQIKYASAHGVQMMTFDSEVELMKVARSHENAKLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++ +    +V G+ FH          +S  + +   
Sbjct: 158 DDSKAVCRLSVKFGATLKSSRLLLERAKELGLDVIGVSFHVGSGCTDPETYSQAISDARY 217

Query: 185 EF---GHFITQIEWISLGGGIHFTDK-DYPVKDFCQRLKEFSEKYSV-----QIYLEPGE 235
            F         +  + +GGG   ++      ++    +    +KY       +I  EPG 
Sbjct: 218 VFDIGAELGYNMSLLDIGGGFPGSEDTKLKFEEIAAVINPALDKYFPVDSGVRIIAEPGR 277

Query: 236 AIVTNTTTLNTTVL----------------DISENIKNLVIVDSSVEAHVPDYLLYQESA 279
             V +  TL   ++                D+S +   +  V+  V       L      
Sbjct: 278 YYVASAYTLAVNIIAKKVIMKEQSASDEEEDVSNDRTLMYYVNDGVYGSFNCILYDHAHV 337

Query: 280 TIYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
               +  P      Y   + G +C   D   E      +++GD + FE++  Y +   + 
Sbjct: 338 LPTLHKKPKPDERMYPCSIWGPTCDGLDRIVEQCSLPDMQVGDWLLFENMGAYTVAASST 397

Query: 334 FNGINMPTIAVKNV 347
           FNG   P I     
Sbjct: 398 FNGFQKPDIYYIMS 411


>gi|330830642|ref|YP_004393594.1| Ornithine decarboxylase [Aeromonas veronii B565]
 gi|328805778|gb|AEB50977.1| Ornithine decarboxylase [Aeromonas veronii B565]
          Length = 388

 Score =  162 bits (410), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 54/361 (14%), Positives = 111/361 (30%), Gaps = 16/361 (4%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P  L+DK  +               V+L  ALK      +   L +       ++  E
Sbjct: 23  GSPLLLLDKAAVRKQYRALTSAL--PDVRLHYALKPLPHEAVVSVLKEEGACFDLATNGE 80

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           V L   +        +    K              +F   + L   K    K   K+ LR
Sbjct: 81  VDLVRSQGVRPGRCIHTHPIKRDSDIRYALEFGCTVFVYDNPLELEKFIPYKDEVKLLLR 140

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           ++     +K  L+                  ++   V GL FH   +          +  
Sbjct: 141 VSFPNPETKVDLSKKFGCTPEQALPLLQLAHAKGIKVMGLSFHVGSQVPHARRHVQAIDA 200

Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDK--DYPVKDFCQRLKEFSEKYSVQI--YLEPG 234
             +          +   + +GGG     +  ++ +  FC  ++E   K    +    EPG
Sbjct: 201 CREIMEQAWALGLKPWVLDIGGGFPVDYEGGEFDIDGFCAPIREALAKLPATVQKIAEPG 260

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGPYT 289
             I     T  ++V+  +     +          S    + D++ Y  S         + 
Sbjct: 261 RFISAPAMTSVSSVMGKAHRGDKIWYYLDDGLYGSYNGQLYDHVTYPVSTPYASGEQ-HN 319

Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349
           +++ G +C + D+  +      + IG+ +  + +  Y     + FN     +I + +   
Sbjct: 320 SVLSGPTCDSVDVIRDGIMLPDLAIGELVVGKVMGAYTWASASTFNFFPKASILILDSSQ 379

Query: 350 T 350
            
Sbjct: 380 K 380


>gi|66813288|ref|XP_640823.1| group IV decarboxylase [Dictyostelium discoideum AX4]
 gi|74897175|sp|Q54UF3|DCOR_DICDI RecName: Full=Probable ornithine decarboxylase; Short=ODC
 gi|60468851|gb|EAL66851.1| group IV decarboxylase [Dictyostelium discoideum AX4]
          Length = 461

 Score =  162 bits (410), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 62/370 (16%), Positives = 118/370 (31%), Gaps = 32/370 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++       +++    VK   A+KC    G+   L+        +S  E+  
Sbjct: 87  FFVADVGVIIKQWQ--KWVKNLPNVKPYYAVKCNPTVGVLRVLDALGTNYDCASRTEIES 144

Query: 66  GHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                       Y    K       A   N   + F+ +S+L K +    +    + +  
Sbjct: 145 VLNLGVDPSRIIYANPCKQISALKFARAHNVKLMTFDNLSELEKIEKFFPEAELVLRIAP 204

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS---FLCFSAML 179
           + S S  +F                 +  +     V G+ FH     +S   +     M+
Sbjct: 205 DDSKSVMRFGSKFGVHIDDC--NDLLEMAKEMNLKVVGVSFHVGSGCQSGDSYADALIMV 262

Query: 180 KNIEKEFGHFITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI 237
           K++         ++  + +GGG      +K        +         +V+I  EPG   
Sbjct: 263 KSVFDMAKKLNMELTLVDVGGGFTGSDDEKFNAFTKVIREKTAELFSPNVKIIAEPGRYF 322

Query: 238 VTNTTTLNTTVLDISENIKNLVIVDSSVE-AHVPDYLLYQE-------------SATIYP 283
              + TL  TV+      +            ++  Y  Y                A + P
Sbjct: 323 AAQSHTLAVTVISKRSIKQEDNRQHPRRTSNNMRQYNYYLADGVYGSFNNTKFDYAKVEP 382

Query: 284 ------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                    P    + G +C + D+  +      +KIGD + F+D+  Y I   + FNG 
Sbjct: 383 LLLKPSTKQPTPCTLFGPTCDSIDVVLKDTQIPELKIGDWLYFQDMGAYTIASSSSFNGF 442

Query: 338 NMPTIAVKNV 347
             P +   N 
Sbjct: 443 CPPPVYYYNS 452


>gi|109475568|ref|XP_232777.4| PREDICTED: similar to ornithine decarboxylase [Rattus norvegicus]
 gi|109477346|ref|XP_001062262.1| PREDICTED: similar to ornithine decarboxylase [Rattus norvegicus]
          Length = 425

 Score =  162 bits (410), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 55/362 (15%), Positives = 100/362 (27%), Gaps = 25/362 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+ + D   L +   T L            A+KC     +   L     G   +S  E+ 
Sbjct: 51  PFMVADLDVLASRHQTFLQALPRVW--PFYAVKCNNRPSLLLVLAALGTGFDCASQGELE 108

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                        +    K        + C   +    S+    K        ++ LRI 
Sbjct: 109 QVLGLGVAPSRIIFANPCKAVSHIQYAARCGVQLLTFDSEEELTKLARHHPGARLILRIQ 168

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
                S F L            +           V G  FH   +  +   +   + +  
Sbjct: 169 TLGGRSTFPLHTKFGARLLACGRLLQVARELGLAVVGASFHVGSDCHTPQSYRQAIADCH 228

Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDYPVKD------FCQRLKEFSEKYSVQIYLEPG 234
           + F        Q+  + LGGG    +      +           + F E   V++  EPG
Sbjct: 229 RVFEMGCKAGHQMSLLDLGGGFPGIEGSEAKFEEMARVVNAALAQYFPEGTGVEVIAEPG 288

Query: 235 EAIVTNTTTLNTTVL----------DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
                +  T    ++                        +    + D +           
Sbjct: 289 RFYAESVCTAAVNIIAKKASLEPGGHRKLAYYLNEGHYGAFRIFLRDPVPRIPIVVKELP 348

Query: 285 TGPY--TAMVCGRSCLAGD-IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
           + P+     + G +C A D +F        + +GD + F D+  Y     + FNG  + T
Sbjct: 349 SDPHLFPCTLYGPTCDAFDRLFSTEVQLPELDVGDWLVFPDMGAYRSTMSSTFNGFPITT 408

Query: 342 IA 343
           + 
Sbjct: 409 VY 410


>gi|296112240|ref|YP_003626178.1| ornithine decarboxylase [Moraxella catarrhalis RH4]
 gi|295919934|gb|ADG60285.1| ornithine decarboxylase [Moraxella catarrhalis RH4]
 gi|326560709|gb|EGE11077.1| ornithine decarboxylase [Moraxella catarrhalis 46P47B1]
 gi|326561751|gb|EGE12086.1| ornithine decarboxylase [Moraxella catarrhalis 7169]
 gi|326571717|gb|EGE21730.1| ornithine decarboxylase [Moraxella catarrhalis BC8]
 gi|326571828|gb|EGE21834.1| ornithine decarboxylase [Moraxella catarrhalis BC7]
 gi|326578069|gb|EGE27929.1| ornithine decarboxylase [Moraxella catarrhalis O35E]
          Length = 391

 Score =  162 bits (410), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 54/363 (14%), Positives = 122/363 (33%), Gaps = 30/363 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP  ++D  ++    +  + +      K+  A+K   A  +   L         +S+YE
Sbjct: 24  ETPLLVVDLSRIKTKYEEMVTLF--PKAKIHYAMKASPATEVVKYLADLGSNFDCASIYE 81

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +    +     +  +Y    K         N    ++ T S+ +   + A          
Sbjct: 82  LDRVLDCGVTADRISYGNTIKKAVHIKYAYNKGIDLYATDSKADLI-NIANNAPGSKVFV 140

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179
                           +            ++++   +   G+ FH   + K    +   L
Sbjct: 141 RILVHGADTAEWPLSRKFGCHPDMAIDLLVQAKNLGLVPYGISFHVGSQQKDVAAWDDAL 200

Query: 180 KNIEKEFGHF----ITQIEWISLGGGIHFTDKDY--PVKDFCQRLKEFS-----EKYSVQ 228
             ++  F         +++ I+LGGG          P+  + + +  +      E    +
Sbjct: 201 AKVKYMFDWMKYEEGIKLQMINLGGGFPTNYISEVNPISVYAEEIHRYLSEDFDEDEMPE 260

Query: 229 IYLEPGEAIVTNTTTLNTTVLDI---------SENIKNLVIVDSSVEAHVPDYLLYQESA 279
           I LEPG ++V ++  L + V+ I              ++ +    +E           + 
Sbjct: 261 IILEPGRSMVGDSGVLVSEVVLISRKSRTDLTRWVYTDVGLFQGLIETLGEAIKYPVYTP 320

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFN 335
            +   T   T ++ G +C + DI  E   +   + ++IGD++ +     Y  +  +  FN
Sbjct: 321 KMETATEKGTVILAGPTCDSTDIMYEDAAYKLPQNLEIGDKLYWLTTGAYTNSYSSVEFN 380

Query: 336 GIN 338
           G  
Sbjct: 381 GFP 383


>gi|229819776|ref|YP_002881302.1| diaminopimelate decarboxylase [Beutenbergia cavernae DSM 12333]
 gi|229565689|gb|ACQ79540.1| diaminopimelate decarboxylase [Beutenbergia cavernae DSM 12333]
          Length = 455

 Score =  162 bits (410), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 59/406 (14%), Positives = 118/406 (29%), Gaps = 44/406 (10%)

Query: 3   KTPYYLIDKQKLLNNLDT----ALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
            TP Y++D+  L                 + V +  A K F +  +   ++       ++
Sbjct: 46  GTPVYVLDEADLRARARAYRDAFTRELAPSSVHVYYAGKAFLSIAVARWVHAEGLRIDTA 105

Query: 59  SLYEVMLG-HEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQK-- 113
           +  E+ +       G     +   K       A+ +    I+ +++ ++ +  D A +  
Sbjct: 106 TGGELAVALRAGIPGADIGMHGNNKSDAEIDRALAAGVGRIVVDSLPEVARVADAAARRG 165

Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFH 164
           +   + +R+   V               + G               +      + GL  H
Sbjct: 166 VRAPVMVRVTTGVHAGGHEYISTAHEDQKFGLSIAAGRAEEAVAAVLARPELELLGLHSH 225

Query: 165 NNCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFC 215
              +      F     ++L+   +        +  + LGGG             P     
Sbjct: 226 IGSQVLEAEAFTVAARSVLELRARIAETHGVLVGEVDLGGGYGVAYLPGEVPLDPAMLAA 285

Query: 216 QRLKEFSEKYS------VQIYLEPGEAIVTNTTTLNTTVLDISENIKN------LVIVDS 263
           +  +   E  +        + +EPG AIV        TV  +             V VD 
Sbjct: 286 ELARTVREVCAELGTDVPDVSIEPGRAIVAPAGCTLYTVGTVKPVRATDGADRLYVSVDG 345

Query: 264 SVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRI 318
            +   +   L         A+      P  + V G+ C +GDI          V  GD +
Sbjct: 346 GMSDSIRPALYGAAYTATIASRASAAPPVRSRVVGKHCESGDIVVHDVDLPADVAAGDLL 405

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +      Y  +  + +N +  P +           IR  +  D   
Sbjct: 406 AVPATGAYGRSMASQYNLVPRPGVVAVAGGEARAVIRRETEEDVLA 451


>gi|114576093|ref|XP_001156697.1| PREDICTED: ornithine decarboxylase 1 isoform 1 [Pan troglodytes]
          Length = 414

 Score =  162 bits (410), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 65/378 (17%), Positives = 116/378 (30%), Gaps = 41/378 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       +++    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 40  FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSKAIVKTLAAIGTGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        +N    +    S++   K        K+ LRI  
Sbjct: 98  VQSLGVLPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       R      ++ +    +V G+ FH          F   + +   
Sbjct: 158 DDSKAVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     V+I  EPG 
Sbjct: 218 VFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSDSGVRIIAEPGR 277

Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270
             V +  TL   ++                          +++ +           AHV 
Sbjct: 278 YYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVK 337

Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
             L  +           Y++ + G +C   D   E      + +GD + FE++  Y +  
Sbjct: 338 PLLQKRPKPD----EKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAA 393

Query: 331 KNWFNGINMPTIAVKNVD 348
            + FNG   PTI      
Sbjct: 394 ASTFNGFQRPTIYYVMSG 411


>gi|194364789|ref|YP_002027399.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein
           [Stenotrophomonas maltophilia R551-3]
 gi|194347593|gb|ACF50716.1| diaminopimelate decarboxylase [Stenotrophomonas maltophilia R551-3]
          Length = 864

 Score =  162 bits (410), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 54/365 (14%), Positives = 107/365 (29%), Gaps = 26/365 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+     +         I      +   A+K  +   +   L     G    S  E
Sbjct: 505 GTPRYVYHLPTVRARARALAAI--KPIDQRYYAIKANSHPAILQLLEAEGFGLECVSHGE 562

Query: 63  VMLGHEKFG---GETHAYNVAYKDC-EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           +    +       +   +  ++    E +A  +   T+  + V  L ++ D     ++++
Sbjct: 563 LKHVFQHLPELSPKRVLFTPSFCPREEYEAAFALGVTVTVDNVEALQRWPDL--FRNREL 620

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCK------DKIESEIKNVNGLMFHNNCENKSF 172
            LR++                 S+ G                   V GL  H     ++ 
Sbjct: 621 WLRVDLGRGEGHHAKVRTGGKDSKFGLPIARVDEFVRAATELGTRVVGLHAHLGSGVETA 680

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-----YSV 227
             +  M   +          ++ I +GGG+     D           E   +      + 
Sbjct: 681 QHWRLMCDELAGFARRIG-SVQTIDIGGGLPIPYSDEDEPFDLDAWAEGLAEVKALHPAF 739

Query: 228 QIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQES----ATIY 282
           ++ +EPG  +V  +  L T     + ++    V +D+ +   +   L          +  
Sbjct: 740 RLAIEPGRFLVAESGVLLTHATQVVEKDGVRRVGLDAGMNTLMRPALYDAWHDIENLSRQ 799

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                    V G  C + D+FG+           D +   D   Y     N +N   MP 
Sbjct: 800 GGYAEAAFDVVGPICESSDVFGKRRKLPVSTAPDDVMLIADAGAYGYVMSNTYNQRAMPR 859

Query: 342 IAVKN 346
             V  
Sbjct: 860 EDVIE 864


>gi|158421957|ref|YP_001523249.1| ornithine decarboxylase [Azorhizobium caulinodans ORS 571]
 gi|158328846|dbj|BAF86331.1| ornithine decarboxylase [Azorhizobium caulinodans ORS 571]
          Length = 376

 Score =  162 bits (410), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 46/358 (12%), Positives = 103/358 (28%), Gaps = 29/358 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   +  N             ++  A+K      +   L +       +S+ E+ 
Sbjct: 17  PCVVVDLDVVRANYTAFARAL--PDTRVFYAVKANPDAAILKALAELGSCFDCASVQEIE 74

Query: 65  LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +        +  ++      +     A          +   ++ K    A        + 
Sbjct: 75  MALFAGATPDRISFGNTIKKERDIERAYKIGVRLFAVDCYEEVEKIARVAPGARVFCRIL 134

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
            + + +           P         +       +  G+ FH   + K+   +   L +
Sbjct: 135 CDGAGAEWPLSRKFGCVPEMA--PDVLEHAFRLGLSPYGVSFHVGSQQKNVHAWDQALGS 192

Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLE 232
               F         +  ++LGGG          K           L+        +  +E
Sbjct: 193 AAYIFRECAVRGISLSMVNLGGGFPTKYLQDVPKAQAYGEAIFDSLRRHFGNAIPETIME 252

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPN 284
           PG  +V N   + T V+ IS+  ++  +    ++          + + + Y        +
Sbjct: 253 PGRGMVGNAGIIETEVVLISKKAESDTMRWVYLDIGKFGGLAETMDEAIRYPLRTPRDGD 312

Query: 285 TGPYTAMVCGRSCLAGDIFGEF--HFEK-PVKIGDRISFEDVAGYNINRKNW-FNGIN 338
                 ++ G +C + D+  E         + IGD++  E    Y        FNG  
Sbjct: 313 DTA-PCVLAGPTCDSADVLYEKTPVELPLSLSIGDKVLIEACGAYTTTYSAVAFNGFP 369


>gi|169774255|ref|XP_001821595.1| ornithine decarboxylase [Aspergillus oryzae RIB40]
 gi|83769458|dbj|BAE59593.1| unnamed protein product [Aspergillus oryzae]
          Length = 399

 Score =  162 bits (410), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 53/357 (14%), Positives = 108/357 (30%), Gaps = 25/357 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+++ D  +++              ++   A+KC +       L++       +S  E+ 
Sbjct: 35  PFFVADGSRIVEQHLRWKSSL--PDIQPFYAVKCNSDVNFLRYLDRLGVNFDCASQGEIE 92

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           L            +    K        +          +     K K       + LRI 
Sbjct: 93  LILSLGVDPSRIIFAHPCKSISALHFAAKQGIRWATFDNIDELEKVKQHSPQIGLLLRIF 152

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
                +K  L D             ++       + G+ FH          F+  ++   
Sbjct: 153 AEDDGAKVCLGDKFGAPWNTTVALLERARELHLQIVGVSFHIGSGASDPEAFTTAIQQAR 212

Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
             F         +  + +GGG   T+ ++        L        V++  EPG    T 
Sbjct: 213 HVFDQGERLGFNMTVLDVGGGFQHTNFEFMASSLRPALAREFGDRPVRVIAEPGRFFATP 272

Query: 241 TTTLNTTVLDISEN------------------IKNLVIVDSSVEAHVPDYLLYQESATIY 282
             TL   V+    +                          S  E ++P  +   E    +
Sbjct: 273 CYTLVCKVIARRTHIGAAPSNPADMLYQNDGLYGCFSCGWSEGEEYMPVLVKQNEGRDDH 332

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFH-FEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
             +G +   + G +C + D   +    +  VK+GD + ++D+  Y ++  + FNG  
Sbjct: 333 RESGEHRYSLWGPTCDSIDQIAKEVVMDGEVKVGDWLVYKDMGAYTMSASSQFNGFP 389


>gi|154246083|ref|YP_001417041.1| Orn/DAP/Arg decarboxylase 2 [Xanthobacter autotrophicus Py2]
 gi|154160168|gb|ABS67384.1| Orn/DAP/Arg decarboxylase 2 [Xanthobacter autotrophicus Py2]
          Length = 376

 Score =  162 bits (410), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 46/358 (12%), Positives = 102/358 (28%), Gaps = 29/358 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   +  N             ++  A+K      +   L +       +S+ E+ 
Sbjct: 17  PCVVVDLDVVRTNYQAFARAL--PDTRVYYAVKANPDAAILQALEELGSSFDCASVGEIE 74

Query: 65  LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +      G E  ++      +     A          ++  +  K    A        + 
Sbjct: 75  MVLATGAGAERISFGNTIKKERDIERAFRLGVRLFAVDSYEEAEKIARVAPHAKVFCRIL 134

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
            + + +           P         +          G+ FH   + K+   +   L +
Sbjct: 135 CDGAGAEWPLSRKFGCEPEMAA--DVLEHAHRLGLAAYGVSFHVGSQQKNVHAWDGALAS 192

Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLE 232
             + F         +  ++LGGG                      L++       +  +E
Sbjct: 193 AAQIFRACAERGISLSMVNLGGGFPTRYLQEVPGAQSYGEAIFSSLRKHFGNQVPETIME 252

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPN 284
           PG  +V N   +   V+ IS+  +   +    ++          + + + Y        +
Sbjct: 253 PGRGMVGNAGLIEAEVVLISKKSEADAMRWVYLDIGKFGGLAETMDEAIRYPLRTPRDGD 312

Query: 285 TGPYTAMVCGRSCLAGDIFGEF--HFEK-PVKIGDRISFEDVAGYNINRKNW-FNGIN 338
                 ++ G +C + D+  E         + IGD++  E    Y        FNG  
Sbjct: 313 DTA-PCVLAGPTCDSADVMYEKTPVELPLSLSIGDKVIIEACGAYTTTYSAVAFNGFP 369


>gi|157117134|ref|XP_001652951.1| ornithine decarboxylase [Aedes aegypti]
 gi|108876152|gb|EAT40377.1| ornithine decarboxylase [Aedes aegypti]
          Length = 416

 Score =  162 bits (409), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 65/395 (16%), Positives = 124/395 (31%), Gaps = 43/395 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P ++++   ++          K   V+   A+KC     +  TL     G   +S  E
Sbjct: 29  DSPVHILNLDDVVAKHRNWRE--KLPRVEPFYAVKCNDDPAIIRTLVALGAGFDCASKKE 86

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
           + +  +     +   Y    K  +       C    + F+   +L+K K    +    + 
Sbjct: 87  IEMVLKLGGNADKIIYAHTAKSMDSITYAKTCGISMMTFDGEIELDKIKKLHPEASLVLR 146

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +R +   +           P        K   +S   +V G+ FH    NK+  CF   +
Sbjct: 147 IRYDSPDAAVSLGKKFGCDPEHEAPHLLKYA-KSLGLSVVGISFHVGSGNKNAECFYGAI 205

Query: 180 KNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-----QIYL 231
           K     F         +  + +GGG        P+  F + +    ++Y       ++  
Sbjct: 206 KTTRTLFNLASELDFDLSLLDIGGGFPGDHDK-PIDTFVKAINLALQRYFPIKSGVRVIA 264

Query: 232 EPGEAIVTNTTTLNTTVLD-----------ISENIKNLVIVDSSVEAHVPDYLLYQE--- 277
           EPG   V +   L   V             ISE +  L          +           
Sbjct: 265 EPGTYYVASAVNLVANVQSKRIIRSGPQATISEIMYYLNDGMFGSFDWLNPRCYPPVVIP 324

Query: 278 -SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
            +  I  +   +   + G +C + D+       + ++IGD + F D+  Y       FNG
Sbjct: 325 GNPQIVRSRDQFLTTLWGPTCDSTDLIASGWMMEELQIGDFLVFNDMGAYGSVLSTNFNG 384

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDYY-----NNL 366
              P + V         +   +Y+          L
Sbjct: 385 FAKPKMMVY--------VSRTTYDQLKLGRNDRRL 411


>gi|326574369|gb|EGE24312.1| ornithine decarboxylase [Moraxella catarrhalis CO72]
          Length = 391

 Score =  162 bits (409), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 54/363 (14%), Positives = 122/363 (33%), Gaps = 30/363 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP  ++D  ++    +  + +      K+  A+K   A  +   L         +S+YE
Sbjct: 24  ETPLLVVDLSRIKTKYEEMVTLF--PKAKIHYAMKASPATEVVKYLADLGSNFDCASIYE 81

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +    +     +  +Y    K         N    ++ T S+ +   + A          
Sbjct: 82  LDRVLDCGVTADRISYGNTIKKAVHIKYAYNKGIDLYATDSKADLI-NIANNAPGSKIFV 140

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179
                           +            ++++   +   G+ FH   + K    +   L
Sbjct: 141 RILVHGADTAEWPLSRKFGCHPDMAVDLLVQAKNLGLVPYGISFHVGSQQKDVAAWDDAL 200

Query: 180 KNIEKEFGHF----ITQIEWISLGGGIHFTDKDY--PVKDFCQRLKEFS-----EKYSVQ 228
             ++  F         +++ I+LGGG          P+  + + +  +      E    +
Sbjct: 201 AKVKYMFDWMKYEEGIKLQMINLGGGFPTNYISEVNPISVYAEEIHRYLSEDFDEDEMPE 260

Query: 229 IYLEPGEAIVTNTTTLNTTVLDI---------SENIKNLVIVDSSVEAHVPDYLLYQESA 279
           I LEPG ++V ++  L + V+ I              ++ +    +E           + 
Sbjct: 261 IILEPGRSMVGDSGVLVSEVVLISRKSRTDLTRWVYTDVGLFQGLIETLGEAIKYPVYTP 320

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFN 335
            +   T   T ++ G +C + DI  E   +   + ++IGD++ +     Y  +  +  FN
Sbjct: 321 KMETATEKGTVILAGPTCDSTDIMYEDAAYKLPQNLEIGDKLYWLTTGAYTNSYSSVEFN 380

Query: 336 GIN 338
           G  
Sbjct: 381 GFP 383


>gi|326562308|gb|EGE12634.1| ornithine decarboxylase [Moraxella catarrhalis 103P14B1]
 gi|326569028|gb|EGE19097.1| ornithine decarboxylase [Moraxella catarrhalis BC1]
 gi|326575512|gb|EGE25437.1| ornithine decarboxylase [Moraxella catarrhalis 101P30B1]
          Length = 391

 Score =  162 bits (409), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 54/363 (14%), Positives = 122/363 (33%), Gaps = 30/363 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP  ++D  ++    +  + +      K+  A+K   A  +   L         +S+YE
Sbjct: 24  ETPLLVVDLSRIKTKYEEMVTLF--PKAKIHYAMKASPATEVVKYLADLGSNFDCASIYE 81

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +    +     +  +Y    K         N    ++ T S+ +   + A          
Sbjct: 82  LDRVLDCGVTADRISYGNTIKKAVHIKYAYNKGIDLYATDSKADLI-NIANNAPGSKVFV 140

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179
                           +            ++++   +   G+ FH   + K    +   L
Sbjct: 141 RILVHGADTAEWPLSRKFGCHPDMAVDLLVQAKNLGLVPYGISFHVGSQQKDVAAWDDAL 200

Query: 180 KNIEKEFGHF----ITQIEWISLGGGIHFTDKDY--PVKDFCQRLKEFS-----EKYSVQ 228
             ++  F         +++ I+LGGG          P+  + + +  +      E    +
Sbjct: 201 AKVKYMFDWMKYEEGIKLQMINLGGGFPTNYISEVNPISVYAEEIHRYLSEDFDEDEMPE 260

Query: 229 IYLEPGEAIVTNTTTLNTTVLDI---------SENIKNLVIVDSSVEAHVPDYLLYQESA 279
           I LEPG ++V ++  L + V+ I              ++ +    +E           + 
Sbjct: 261 IILEPGRSMVGDSGVLVSEVVLISRKSRTDLTRWVYTDVGLFQGLIETLGEAIKYPVYTP 320

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFN 335
            +   T   T ++ G +C + DI  E   +   + ++IGD++ +     Y  +  +  FN
Sbjct: 321 KMETATEKGTVILAGPTCDSTDIMYEDAAYKLPQNLEIGDKLYWLTTGAYTNSYSSVEFN 380

Query: 336 GIN 338
           G  
Sbjct: 381 GFP 383


>gi|320450162|ref|YP_004202258.1| diaminopimelate decarboxylase [Thermus scotoductus SA-01]
 gi|320150331|gb|ADW21709.1| diaminopimelate decarboxylase [Thermus scotoductus SA-01]
          Length = 387

 Score =  162 bits (409), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 60/371 (16%), Positives = 122/371 (32%), Gaps = 22/371 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP+Y  D  ++   L            +   ALK     G+   L     G  + SL E
Sbjct: 18  PTPFYAYDWGRVRAQLARLREAF--PFARFFYALKANPRLGLLRRLRDLGLGAEAVSLGE 75

Query: 63  VMLG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           V+      FG +   +N        + A+      ++ ++   + +          ++ L
Sbjct: 76  VLRAYRSGFGPDQVVWNGPVKTPEALTALKGREPLVVLDSEGDVGRVAR--YLPGARVLL 133

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCENKSFL 173
           R+NP +  +        R  S+ G    + +   ++ +        GL  H         
Sbjct: 134 RVNPDLPVNTHGHLATGRGESQFGV-LPEAVPGLVRTIREKGLTFLGLHLHLGSALSRVE 192

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
            F      +E  +      +  ++LGGG         ++   + LK  +  Y  Q++LEP
Sbjct: 193 DFLEGYGVLEALYPQVGP-VAVLNLGGGFGLDLPLEALQ---EPLKSLARLYGAQVWLEP 248

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT---- 289
           G  +V     L + V+ + E  +  V++D+ + + +   L       +            
Sbjct: 249 GRYLVAEAGVLVSRVVGLKETRRRYVLLDAGMTSLIRPALYGARHPILPLYPREGREEGI 308

Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349
             + G +C AGDI          + G+ ++  +   Y  +    +     P   +    G
Sbjct: 309 FDLAGPACEAGDILAREVRLPVPQEGEALAILEAGAYGASMSLTYLDTPRPLELLWTGAG 368

Query: 350 TIKAIREFSYN 360
                    + 
Sbjct: 369 WEVLRTREPWE 379


>gi|312879707|ref|ZP_07739507.1| ornithine decarboxylase [Aminomonas paucivorans DSM 12260]
 gi|310782998|gb|EFQ23396.1| ornithine decarboxylase [Aminomonas paucivorans DSM 12260]
          Length = 392

 Score =  162 bits (409), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 62/358 (17%), Positives = 122/358 (34%), Gaps = 26/358 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+ LID  ++    D    +R+ +  +   A+K      +   L         +S+YE
Sbjct: 30  QTPFLLIDLGRIAERYDEL--VREMSFARPFYAVKANPHESILKLLAARGSSFDVASVYE 87

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
           +          E  +Y    K     A   +        ++ S L K  + A     K+ 
Sbjct: 88  LDQMLALGVEPERISYGNTIKKARDIAYAYHKGIRLFATDSESDLRKIAENA--PGSKVF 145

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
            RI    S + + L+           +             G+ FH   + +    +  ++
Sbjct: 146 YRILSDCSGADWPLSRKFGTHPDSIYRLIGLSTRLPVQPYGVSFHVGSQQRDIGQWGYLI 205

Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYS----VQIY 230
                 F     F  +++ I+LGGG+         P+  +   ++ F E+       +I+
Sbjct: 206 STCRYLFDSAREFNVELKMINLGGGLPAQYFDPTPPIALYASEIRRFLEEDFGKDLPEIF 265

Query: 231 LEPGEAIVTNTTTLNTTVLDIS-----ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285
           +EPG  +V +   L T V+ IS          + +        +       +        
Sbjct: 266 IEPGRGMVGDAGILVTEVVLISKKSQVNPYSWVYLDTGKFGGLIETLDEAIKYPVYVDKK 325

Query: 286 GP-YTAMVCGRSCLAGDIFG---EFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338
           GP    ++ G +C + D+     ++     +  GDR+ F     Y  +  +  FNG  
Sbjct: 326 GPSQKVILAGPTCDSVDVLYEQFKYELPVTLAEGDRVYFLSTGAYTASYCSVNFNGFP 383


>gi|222099782|ref|YP_002534350.1| Ornithine decarboxylase [Thermotoga neapolitana DSM 4359]
 gi|221572172|gb|ACM22984.1| Ornithine decarboxylase [Thermotoga neapolitana DSM 4359]
          Length = 386

 Score =  162 bits (409), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 54/363 (14%), Positives = 112/363 (30%), Gaps = 22/363 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP+ L D   +           K  G  +  A+K  +   +   L +       +S  E
Sbjct: 13  KTPFLLFDLSVVEKKFLEMKAALK--GADIYYAVKANSHPRILSLLAKLGCNFDVASKGE 70

Query: 63  VMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +         G+  ++      ++    A  +       ++  ++ K    A      + 
Sbjct: 71  IEKLLALGISGKRMSFGNTIKKEEDIAFAYKNGIRLFAVDSEMEIEKVAISAPGSRIFVR 130

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +  + S +           P   L           I    G+ FH   +N +   +   +
Sbjct: 131 IATDGSDADWPLSRKFGTDPDHALDLLFYAAKMKLIPA--GVSFHVGSQNLNPESWRKAI 188

Query: 180 KNIEKEFGH---FITQIEWISLGGGIH--FTDKDYPVKDFCQRLKEFSEKYSVQIY---- 230
               K F         +  +++GGG           +++  + ++E  ++    ++    
Sbjct: 189 SVAGKIFKKAMRSGLNLFLLNVGGGFPVQHRKPIPTMEEIGRVIEEAIDENLWFVHGLKL 248

Query: 231 -LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH----VPDYLLYQESATIYPNT 285
             EPG  +V     L T VL  SE      +   +   H          Y+       N 
Sbjct: 249 ISEPGRYMVGEAGWLVTKVLLKSERNGEKWVYLDAGVFHGLAETMQNFEYEVRVLGKEND 308

Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344
                 + G +C + D+  +       + + D + F +   Y +    +FNGI  P +  
Sbjct: 309 ELEEYHLAGPTCDSVDVIYDRILLPKTITLNDLVCFVNAGAYTVEYNTYFNGIEPPKMVF 368

Query: 345 KNV 347
              
Sbjct: 369 VEE 371


>gi|256379655|ref|YP_003103315.1| Orn/DAP/Arg decarboxylase 2 [Actinosynnema mirum DSM 43827]
 gi|255923958|gb|ACU39469.1| Orn/DAP/Arg decarboxylase 2 [Actinosynnema mirum DSM 43827]
          Length = 397

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 50/367 (13%), Positives = 110/367 (29%), Gaps = 27/367 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP  +ID   ++             GV +  A+K      + + L         +S  E
Sbjct: 35  GTPCLVIDLPTVVERFRALRAAL--PGVGIFYAVKANPTREVVEVLAAEGCCFDVASPNE 92

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + L   E    E  +Y+   K     A          + ++   +    + A      + 
Sbjct: 93  IDLCLAEGAPPEAVSYSNPIKKAADIAYAHRLGVRLFVSDSEQDVRTIAEHAPGARVMLR 152

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           + +    S   F       P                    G+ FH   +      + A +
Sbjct: 153 ILVESKGSTYPFGKKFGCAPDMA--VDLLRLAGELGLEPYGVAFHAGSQQLDPTGWDAAI 210

Query: 180 KNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVK------DFCQRLKEFSEKYSVQIY 230
            +  +   +       +  ++LGGG+     + P             ++    +++  + 
Sbjct: 211 ADAAEVTAKLRAEGVALSVVNLGGGLPAGYLEQPPPLAEYAAAMTDAVRRTFGEHAPSVM 270

Query: 231 LEPGEAIVTNTTTLNTTVLDI----SENIKNLVIVDSSVEAHVPDYLLYQ-ESATIYPNT 285
           +EPG A+V  +  + ++V+ +      + +  V +D      + +               
Sbjct: 271 IEPGRALVAESGVIRSSVVLVARKSYSDERRWVFLDIGRYGGLAETEGEAIAYPLRTTRD 330

Query: 286 GPYT--AMVCGRSCLAGDIFG---EFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGINM 339
           G  T   ++ G +C A D+      +     ++ GD +       Y  +  +  FNG   
Sbjct: 331 GGETGPVVLAGPTCDADDVLYQHTRYDLPLDLRAGDHVDLLRAGAYTASYSSVAFNGFPP 390

Query: 340 PTIAVKN 346
                  
Sbjct: 391 LATYCVR 397


>gi|114576089|ref|XP_001157142.1| PREDICTED: ornithine decarboxylase 1 isoform 7 [Pan troglodytes]
          Length = 472

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 65/399 (16%), Positives = 119/399 (29%), Gaps = 44/399 (11%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       +++    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 40  FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSKAIVKTLAAIGTGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        +N    +    S++   K        K+ LRI  
Sbjct: 98  VQSLGVLPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       R      ++ +    +V G+ FH          F   + +   
Sbjct: 158 DDSKAVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     V+I  EPG 
Sbjct: 218 VFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSDSGVRIIAEPGR 277

Query: 236 AIVTNTTTLNTTVL---------------DISENIKNLVIVDSSVEAHVPDYL------- 273
             V +  TL   ++                       +   +SS +  +           
Sbjct: 278 YYVASAFTLAVNIIAKKIVLKEQTGSDGMYKGRITSCITENESSEQTFMYYVNDGVYGSF 337

Query: 274 ----LYQESATIYPNTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323
                            P        + + G +C   D   E      + +GD + FE++
Sbjct: 338 NCILYDHAHVKPLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENM 397

Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
             Y +   + FNG   PTI         + +++F   D+
Sbjct: 398 GAYTVAAASTFNGFQRPTIYYVMSGPAWQLMQQFQNPDF 436


>gi|218462257|ref|ZP_03502348.1| probable ornithine decarboxylase protein [Rhizobium etli Kim 5]
          Length = 377

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 46/359 (12%), Positives = 104/359 (28%), Gaps = 33/359 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   + +N     +   ++   +  A+K   A  +   L         +S+ E+ 
Sbjct: 18  PCLVVDLDVVRDNFQAFRHAMPDSA--IYYAVKANPAPEVLKLLAGLGSNFDCASVAEIE 75

Query: 65  LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +           ++      +     A          ++  ++ K    A        + 
Sbjct: 76  MALDAGATAARISFGNTIKKERDVARAHALGVSLFAVDSHEEVEKISRAAPGARVFCRVL 135

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179
            +   +           P   +       + +    +   G+ FH   +      + + L
Sbjct: 136 TDGEGAEWPLSRKFGCVPQMAVDV----LVYAHQLGLQSYGVSFHVGSQMTKVDAWDSAL 191

Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIY 230
            + ++ F         ++ +++GGG                    Q L+        Q  
Sbjct: 192 ADAKRVFVSLAKQGIHLQMVNMGGGFPTKYLRDVPSAEAYGKSIYQALRTHFGNQIPQTI 251

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282
           +EPG  +V N   +   V+ IS+   N               +   + + + Y       
Sbjct: 252 IEPGRGMVGNAGVIKAEVVLISKKSDNDDARWVFLDIGKFGGLAETMDEAIRYPIRTEHD 311

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRKNW-FNGI 337
            +      ++ G +C + D+  E         + IGD +  E    Y        FNG 
Sbjct: 312 GDEM-EPCVIAGPTCDSADVLYEKKLYPLPISLSIGDEVLIEGTGAYTTTYSAVAFNGF 369


>gi|306920205|emb|CBX19979.1| ornithine decarboxylase [Nicotiana glauca]
          Length = 433

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 50/362 (13%), Positives = 113/362 (31%), Gaps = 26/362 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y++D  ++++ +D          ++   A+KC         L+        +S  E+ 
Sbjct: 66  PFYVLDLGEVVSLMDQWKSAL--PNIRPFYAVKCNPEPSFLSILSAMGSNFDCASRAEIE 123

Query: 65  LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                    +   +    K       A     +   +++  ++ K +    K    + ++
Sbjct: 124 YVLALGISPDRIVFANPCKPESDIIFAAKVGVNLTTYDSEDEVYKIRKHHPKSELLLRIK 183

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE----NKSFLCFSA 177
                +    +            E      ++    V+G+ FH        N      +A
Sbjct: 184 PMFDGNARCPMGPKY-GALPEEVEPLLRAAQAARLTVSGVSFHIGSGDADSNAYLGAIAA 242

Query: 178 MLKNIEKEFGHFITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
             +  E      ++++  + +GGG           V       + F ++  + I  EPG 
Sbjct: 243 AKEVFETAAKLGMSKMTVLDVGGGFTSGHQFTAAAVAVKSALKQRFDDEPELTIIAEPGR 302

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPN------ 284
                  TL TT++      +            S+   + D+     +     +      
Sbjct: 303 FFAETAFTLATTIIGKRVRGELREYWINDGLYGSMNCVLYDHATVNATPLAVQSNRSNVT 362

Query: 285 ---TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
              +  +   V G +C A D     +    +++ D + F ++  Y     + FNG N   
Sbjct: 363 CGGSKTFPTTVFGPTCDALDTVLRDYQLPELQVNDWLVFPNMGAYTKAAGSNFNGFNTSA 422

Query: 342 IA 343
           I 
Sbjct: 423 IV 424


>gi|259481591|tpe|CBF75254.1| TPA: ornithine decarboxylase (Eurofung) [Aspergillus nidulans FGSC
           A4]
          Length = 434

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 54/359 (15%), Positives = 106/359 (29%), Gaps = 33/359 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D  ++        +    + V+   A+KC     +   + +  +G   +S  E+ +
Sbjct: 61  FYVADMGEVYR--QHLRWKMNLSRVRPFYAVKCNPDPEVLRLMAKLGNGFDCASKAEIDM 118

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       Y    K        +          +    +K KA     ++ LRI  
Sbjct: 119 ALSTGVDPSRIIYAQPCKTKSYLRHAAKVGVKQMTFDNADELYKIKACYPEAELYLRILT 178

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S S    +        +  +  +        + G+ FH     +    F   +++   
Sbjct: 179 DDSNSLCQFSMKFGASLDVARQLLELAHQLELKIVGVSFHVGSGAEDPKAFLKAVQDARL 238

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ---IYLEPGEAIV 238
            F        ++  + +GGG          + F   L    E Y      I  EPG   V
Sbjct: 239 VFDQAAEIGHELHTLDVGGGF----TGETFEKFAAVLDSALETYFPPNIRIIAEPGRYYV 294

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY---------- 288
               TL   ++              +   ++ D +    S  I+ +  P           
Sbjct: 295 GGAFTLAANIIARRGVQDPENPSKDAYMIYLNDGVYGNFSNIIFDHQHPEARILSCASEI 354

Query: 289 ---------TAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGI 337
                    T  + G +C   D+  +       + +GD + FE++  Y       FNG 
Sbjct: 355 NGRPVSEDVTYSIWGPTCDGIDVISQRSVLPGLLDVGDWLYFEEMGAYTRCSATRFNGF 413


>gi|118380|sp|P27119|DCOR_MUSPA RecName: Full=Ornithine decarboxylase; Short=ODC
 gi|200124|gb|AAA39847.1| ornithine decarboxylase [Mus pahari]
          Length = 461

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 62/382 (16%), Positives = 117/382 (30%), Gaps = 33/382 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       +++    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 40  FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSRAIVSTLAATGTGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        ++    +    S++   K        K+ LRI  
Sbjct: 98  VQGLGVPPERIIYANPCKQVSQIKYAASSGVQMMTFDSEIELMKVARAHPKAKLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++ +    +V G+ FH          F   + +   
Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQAVSDARC 217

Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     V+I  EPG 
Sbjct: 218 VFDMGTEVGFSMYLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPSDSGVRIIAEPGR 277

Query: 236 AIVTNTTTLNTTVLDIS-------------------ENIKNLVIVDSSVEAHVPDYLLYQ 276
             V +  TL   ++                              V  S    + D+   +
Sbjct: 278 YYVASAFTLAVNIIAKKTVWKEQPGSDDEDESNEQTFMYYVNDGVYGSFNCILYDHAHVK 337

Query: 277 E--SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                   P+   Y++ + G +C   D   E      + +GD + FE++  Y +   + F
Sbjct: 338 ALLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTF 397

Query: 335 NGINMPTIAVKNVDGTIKAIRE 356
           NG   P I         + ++ 
Sbjct: 398 NGFQRPNIYYVMSRPMWQLMKR 419


>gi|28838469|gb|AAH47954.1| MGC52527 protein [Xenopus laevis]
          Length = 456

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 62/370 (16%), Positives = 120/370 (32%), Gaps = 39/370 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++       +++    VK   A+KC ++ G+   L +   G   +S  E+ L
Sbjct: 39  FFVADLGDVVR--KHLRFLKALPRVKPFYAVKCNSSKGVVKILAELGAGFDCASKTEIEL 96

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             +     E   Y    K        +     +    +++   K      + ++ LRI  
Sbjct: 97  VQDIGVAPERIIYANPCKQISQIKYAAKNGVQMMTFDNEVELSKVSRSHPNARMVLRIAT 156

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS---FLCFSAMLKN 181
             S S   L+       +   +  +  ++   +V G+ FH          +    +  + 
Sbjct: 157 DDSKSSARLSVKFGAPLKSCRRLLEMAKNLSVDVIGVSFHVGSGCTDSKAYTQAISDARL 216

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL------KEFSEKYSVQIYLEPGE 235
           + +    F  ++  + +GGG   T+      +    +        F E   VQI  EPG 
Sbjct: 217 VFEMASEFGYKMWLLDIGGGFPGTEDSKIRFEEIAGVINPALDMYFPESSDVQIIAEPGR 276

Query: 236 AIVTNTTTLNTTVLDIS-----------------ENIKNLVIVDSSVEAHVPDYLLYQES 278
             V +  +L   V+                            V  S    V D       
Sbjct: 277 YYVASAFSLAVNVIAKKEVEHSVSDDEENESSKSIMYYVNDGVYGSFNCLVFD----HAH 332

Query: 279 ATIYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                +  P      YT+ + G +C   D   E      + +GD + FE++  Y I   +
Sbjct: 333 PKPILHKKPSPDQPLYTSSLWGPTCDGLDQIAERVQLPELHVGDWLLFENMGAYTIAASS 392

Query: 333 WFNGINMPTI 342
            FNG     +
Sbjct: 393 NFNGFQQSPV 402


>gi|300312040|ref|YP_003776132.1| diaminopimelate decarboxylase [Herbaspirillum seropedicae SmR1]
 gi|300074825|gb|ADJ64224.1| diaminopimelate decarboxylase protein [Herbaspirillum seropedicae
           SmR1]
          Length = 418

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 46/379 (12%), Positives = 105/379 (27%), Gaps = 38/379 (10%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+Y+ D+  L   +         A + L  ++K      +   + Q +DG   +S  E+
Sbjct: 41  TPFYVYDRALLRARVAHLRAHLP-AELALHYSIKANPMPALVQAMAQLVDGFDVASGGEL 99

Query: 64  MLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
               +     +  ++        E+   L+    +   +  +       AQ+L  + G+ 
Sbjct: 100 ATALDTPMPVQHISFTGPGKSLAELRRALAAGVMLHVESEREAEAVAALAQELGVRPGVT 159

Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCKD----KIESEIKNVNGLMFHNNCENKSFLCFS 176
           +  +     K             G   +           + V        C ++S    +
Sbjct: 160 LRINPPFELKSSGMRMGGGAKPFGVDAEAAPALLRWLAGQGVQVAGLQIFCGSQSLDAQA 219

Query: 177 AM------LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ-- 228
            M       +   +  G     +  +++GGG                +     ++  +  
Sbjct: 220 IMAAQSSSFELALQLAGEAGLSLRVLNIGGGFGIPYFPGERALEIAPIGAHLAQWLPRLR 279

Query: 229 -------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-----------VP 270
                  + +E G  +V       + V+D  ++   + +V      H           + 
Sbjct: 280 ALHPQLRVVMEMGRYLVGEAGLYVSRVIDRKQSRGEVFLVVDGGLHHHLAASGNFGQVIR 339

Query: 271 ---DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
                 +  +              V G  C   D+           +GD +       Y 
Sbjct: 340 KNYPVTIVPQQPQRSGGGTTERVSVVGPLCTPLDVLAAQMLLPAAAVGDLVVVFQSGAYG 399

Query: 328 INRKNW-FNGINMPTIAVK 345
           ++     F G   P   + 
Sbjct: 400 LSASPTAFLGHPAPAEVLV 418


>gi|269960557|ref|ZP_06174929.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269834634|gb|EEZ88721.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 483

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 52/393 (13%), Positives = 110/393 (27%), Gaps = 36/393 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP+Y   + +L ++L T       A +    +LK      +   ++Q   G    SL 
Sbjct: 69  IGTPFYAYSRAQLTHDLQTLKSTMPQA-LTFYYSLKANPNLSLVKIIHQQGVGCEVCSLT 127

Query: 62  EVMLGHEKFGG--ETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
           E+           +         D E+   +      ++  ++++L + +  A +  K  
Sbjct: 128 ELETALNAGASVQDIIFVGPGKSDKELTRCVELGIKAVVVESLNELQRLETVASRAGKYQ 187

Query: 119 GLRINPSVS-YSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCENK 170
                 + +  S+      +    + G                    + G+  +      
Sbjct: 188 AFAFRINPNFTSEKARLVMSGKPRQFGIDEDIVMAALNQLERYPHLTLTGIHVYLGTRIL 247

Query: 171 S----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL-------- 218
                      +L    +        + ++ +GGG+                        
Sbjct: 248 DAQAVIENTRNILSLATRIEAKLDRPLGFVDVGGGLGIPYYPKEQFLDLDATALGLRPLI 307

Query: 219 -KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAH-------- 268
            +  ++    ++ +E G  I+  +    T V DI  +  K   I D     H        
Sbjct: 308 AQFKADHPETRLIMELGRYIIARSGVFITAVRDIKTSKGKTFAICDGGSNCHGAAAGLGS 367

Query: 269 -VPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
            +      +   T          M+ G  C   D+ G+      ++ GD +       Y 
Sbjct: 368 VIRKNFPIRRLGTPIEGEPREDYMITGPLCTPTDLIGDSVVLPQLQSGDLLGVFHSGAYG 427

Query: 328 INRKN-WFNGINMPTIAVKNVDGTIKAIREFSY 359
                  F     P   +   D  I+  R   +
Sbjct: 428 PTASPVNFLSFGQPAEVLIEGDTAIQIRRAECF 460


>gi|148230687|ref|NP_001079692.1| ornithine decarboxylase 2 [Xenopus laevis]
 gi|24636815|sp|Q9I8S4|DCOR2_XENLA RecName: Full=Ornithine decarboxylase 2; Short=ODC 2; Short=xODC2
 gi|9653274|gb|AAF27628.2|AF217544_1 ornithine decarboxylase-2 [Xenopus laevis]
          Length = 456

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 62/370 (16%), Positives = 120/370 (32%), Gaps = 39/370 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++       +++    VK   A+KC ++ G+   L +   G   +S  E+ L
Sbjct: 39  FFVADLGDVVR--KHLRFLKALPRVKPFYAVKCNSSKGVVKILAELGAGFDCASKTEIEL 96

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             +     E   Y    K        +     +    +++   K      + ++ LRI  
Sbjct: 97  VQDVGVAPERIIYANPCKQISQIKYAAKNGVQMMTFDNEVELSKVSRSHPNARMVLRIAT 156

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS---FLCFSAMLKN 181
             S S   L+       +   +  +  ++   +V G+ FH          +    +  + 
Sbjct: 157 DDSKSSARLSVKFGAPLKSCRRLLEMAKNLSVDVIGVSFHVGSGCTDSKAYTQAISDARL 216

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL------KEFSEKYSVQIYLEPGE 235
           + +    F  ++  + +GGG   T+      +    +        F E   VQI  EPG 
Sbjct: 217 VFEMASEFGYKMWLLDIGGGFPGTEDSKIRFEEIAGVINPALDMYFPESSDVQIIAEPGR 276

Query: 236 AIVTNTTTLNTTVLDIS-----------------ENIKNLVIVDSSVEAHVPDYLLYQES 278
             V +  +L   V+                            V  S    V D       
Sbjct: 277 YYVASAFSLAVNVIAKKEVEHSVSDDEENESSKSIMYYVNDGVYGSFNCLVFD----HAH 332

Query: 279 ATIYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                +  P      YT+ + G +C   D   E      + +GD + FE++  Y I   +
Sbjct: 333 PKPILHKKPSPDQPLYTSSLWGPTCDGLDQIAERVQLPELHVGDWLLFENMGAYTIAASS 392

Query: 333 WFNGINMPTI 342
            FNG     +
Sbjct: 393 NFNGFQQSPV 402


>gi|27382870|ref|NP_774399.1| ornithine decarboxylase [Bradyrhizobium japonicum USDA 110]
 gi|27356043|dbj|BAC53024.1| ornithine decarboxylase [Bradyrhizobium japonicum USDA 110]
          Length = 380

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 45/358 (12%), Positives = 113/358 (31%), Gaps = 29/358 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D + + +N  T          ++  A+K   A  +   L        ++++ E+ 
Sbjct: 21  PCLVVDLEVVRDNYQTFSKAL--PDSRVFYAVKANPAPEVLALLASMGSCFDTATVAEIE 78

Query: 65  LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +        +  ++      +     A          +  +++ K    A        + 
Sbjct: 79  MALAAGATPDRISFGNTIKKERDIARAFALGIRLFAVDCAAEVEKIARAAPGAKVFCRIL 138

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
                + +++ L+        +     D  +       G+ FH   + +    +   L  
Sbjct: 139 --YDCAGAEWPLSRKFGCDPEMAVDVLDVAKRLGLEPCGISFHVGSQQRKVKAWDRALAM 196

Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIYLE 232
             + F         +  +++GGG                +   + L++       +  +E
Sbjct: 197 ASQVFRDCAERGINLSMVNMGGGFPTKYLKDVPPVVTYGRSIFRALRKHFGNQIPETIIE 256

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPN 284
           PG  +V N   + + V+ IS+      +    ++          + + + Y         
Sbjct: 257 PGRGMVGNAGIIESEVVLISKKSDEDEVRWVYLDIGKFGGLAETMDESIRYAIRTAHDGA 316

Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338
                 ++ G +C + D+  E   +     ++IGD++  E    Y     +  FNGI 
Sbjct: 317 DMT-PCVLAGPTCDSADVLYEKNPYPLPVTLEIGDKVLIEGTGAYTSTYSSVAFNGIP 373


>gi|145298270|ref|YP_001141111.1| ornithine decarboxylase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|142851042|gb|ABO89363.1| ornithine decarboxylase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 417

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 55/358 (15%), Positives = 110/358 (30%), Gaps = 16/358 (4%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P  L+DK  +         +     V+L  ALK      +   L +       ++  E
Sbjct: 52  GSPLLLLDKAAVRKQYRAL--VAALPDVRLHYALKPLPHEAVVSVLKEEGACFDLATNGE 109

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           V L   +        +    K              +F   + L   K    K   K+ LR
Sbjct: 110 VDLVRSQGVRPGRCIHTHPIKRDSDIRYALEYGCTVFVYDNPLELEKFIPYKDEVKLLLR 169

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           ++     +K  L+                  ++   V GL FH   +          +  
Sbjct: 170 VSFPNPETKGDLSKKFGCTPEQALPLLQLAHAKGIKVMGLSFHVGSQVPHARRHVQAIDA 229

Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDK--DYPVKDFCQRLKEFSEKYSVQI--YLEPG 234
             +          +   + +GGG        ++ +  FC  ++E   K    +    EPG
Sbjct: 230 CREIMEQAWDLGLKPWVLDIGGGFPVDYDGGEFDIDGFCAPIREALAKLPATVQKIAEPG 289

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGPYT 289
             I     T  ++V+  +     +          S    + D++ Y  S         + 
Sbjct: 290 RFISPPAMTSISSVMGKAHRGDKIWYYLDDGLYGSYNGQLYDHVTYPVSTPYARGEQ-HN 348

Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
           +++ G +C + D+  E      + IG+ +    +  Y     + FN     +I + + 
Sbjct: 349 SVLSGPTCDSVDVIREEIMLPDLAIGELVVGRVMGAYTWASASTFNFFPKASILILDS 406


>gi|149024091|gb|EDL80588.1| similar to ornithine decarboxylase (predicted) [Rattus norvegicus]
          Length = 421

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 54/356 (15%), Positives = 103/356 (28%), Gaps = 19/356 (5%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+ + D   L +   T L            A+KC     +   L     G   +S  E+ 
Sbjct: 61  PFMVADLDVLASRHQTFLQALPRVW--PFYAVKCNNRPSLLLVLAALGTGFDCASQGELE 118

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                        +    K        + C   +    S+    K        ++ LRI 
Sbjct: 119 QVLGLGVAPSRIIFANPCKAVSHIQYAARCGVQLLTFDSEEELTKLARHHPGARLILRIQ 178

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
                S F L            +           V G  FH   +  +   +   + +  
Sbjct: 179 TLGGRSTFPLHTKFGARLLACGRLLQVARELGLAVVGASFHVGSDCHTPQSYRQAIADCH 238

Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDYPVKD------FCQRLKEFSEKYSVQIYLEPG 234
           + F        Q+  + LGGG    +      +           + F E   V++  EPG
Sbjct: 239 RVFEMGCKAGHQMSLLDLGGGFPGIEGSEAKFEEMARVVNAALAQYFPEGTGVEVIAEPG 298

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH------VPDYLLYQESATIYPNTGPY 288
                +  T    ++    +++       +   +         +L       +  +   +
Sbjct: 299 RFYAESVCTAAVNIIAKKASLEPGGHRKLAYYLNEGHYGAFRIFLRDPVPRELPSDPHLF 358

Query: 289 TAMVCGRSCLAGD-IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343
              + G +C A D +F        + +GD + F D+  Y     + FNG  + T+ 
Sbjct: 359 PCTLYGPTCDAFDRLFSTEVQLPELDVGDWLVFPDMGAYRSTMSSTFNGFPITTVY 414


>gi|196009165|ref|XP_002114448.1| hypothetical protein TRIADDRAFT_27475 [Trichoplax adhaerens]
 gi|190583467|gb|EDV23538.1| hypothetical protein TRIADDRAFT_27475 [Trichoplax adhaerens]
          Length = 391

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 63/377 (16%), Positives = 116/377 (30%), Gaps = 32/377 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y+++   +L    T L +     V+   A+KC     +  TL+    G   +S+ E+ 
Sbjct: 17  PFYIVNVGNILKKHKTWLSLLPR--VEPFYAVKCNDDRNVLATLSALGIGFDCASMAEIK 74

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
              +         Y    K        +  +  +    ++    K K      K+ LR+ 
Sbjct: 75  AVLKLGVPPSKIVYANPCKQASHLKFAAKREVSMMTFDNEPELHKVKQLHPTAKLILRLL 134

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S S   L        +          +   NV G+ FH          FS+ ++  +
Sbjct: 135 TDDSKSLCRLGQKYGAPLKTVPNLLQVARNLDLNVVGISFHVGSGCYDASAFSSAVEIAK 194

Query: 184 KEFGH---FITQIEWISLGGGIH-FTDKDYPVKDFCQRLKEFSEKYSV-----QIYLEPG 234
             F +      Q + + +GGG           ++    L +   K+       +I  EPG
Sbjct: 195 TAFDYGKSMGFQFDILDIGGGFPGSPRATVSFEEISATLNKALNKHFPVESGVRIIAEPG 254

Query: 235 EAIVTNTTTLNTTVLDIS--------------------ENIKNLVIVDSSVEAHVPDYLL 274
              V +   L   V+                               V  S    + D+ +
Sbjct: 255 RYYVASAFNLAVNVIAKRQVNDDNTQAQGKQHAYRNQKYMYYVNDGVYGSFNCLLYDHAI 314

Query: 275 YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                    N   Y++ + G +C   D   +      + +GD + FED+  Y     + F
Sbjct: 315 VYPKTLGRDNEQQYSSSIWGPTCDGLDCVMKECMLPELDVGDWMYFEDMGAYTAAAASNF 374

Query: 335 NGINMPTIAVKNVDGTI 351
           NG   P       +   
Sbjct: 375 NGFQKPLAYYVIEEKVW 391


>gi|71064610|ref|YP_263337.1| ornithine decarboxylase [Psychrobacter arcticus 273-4]
 gi|71037595|gb|AAZ17903.1| ornithine decarboxylase [Psychrobacter arcticus 273-4]
          Length = 391

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 58/373 (15%), Positives = 131/373 (35%), Gaps = 34/373 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+ ++D  ++       +        K+  A+K   A  + + L +       +S+YE
Sbjct: 24  ETPFLVVDLNRIKIKYHEMVGFF--PNAKIHYAMKASPAVEVINLLAELGSNFDCASIYE 81

Query: 63  VMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +    +        +Y       +    A     D    ++ + L      A      + 
Sbjct: 82  LDRVLDCGVEASRISYGNTIKKPEHVKYAFDKGIDLYATDSEADLKNIAKHAPGSKIFVR 141

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177
           + +               +         +  I+++   +   G+ FH   + K    +  
Sbjct: 142 ILVQ---GSETAEWPLSRKFGCHPNMAIELLIQAQELGLVPYGISFHVGSQQKDVAAWDD 198

Query: 178 MLKNIEKEFGHF----ITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFS-----EKYS 226
            L  ++  F         +++ I+LGGG       +  P+K + + +K +       +  
Sbjct: 199 ALAKVKYMFDWMKNEEGIKLQMINLGGGFPANYLSEVNPIKVYAEEIKSYLSDDYSAEDM 258

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQ-E 277
            +I LEPG ++V  +  L + V+ IS      +      +          + + + Y   
Sbjct: 259 PEIILEPGRSLVGGSGVLVSDVVLISRKSHTDLTRWVYTDVGLFQGLIETLGEAIKYPVY 318

Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-W 333
           +  +  +T   T ++ G +C + DI  E   +   + ++IGD+I +     Y  +  +  
Sbjct: 319 TPKMETSTSAGTVVLAGPTCDSTDIMYEEAGYQLPEELEIGDKIFWLTTGAYTNSYSSIE 378

Query: 334 FNGINMPTIAVKN 346
           FNG     +   N
Sbjct: 379 FNGFPPLEVVYVN 391


>gi|307297673|ref|ZP_07577479.1| Orn/DAP/Arg decarboxylase 2 [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916933|gb|EFN47315.1| Orn/DAP/Arg decarboxylase 2 [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 387

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 56/364 (15%), Positives = 125/364 (34%), Gaps = 22/364 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           IKTP+ ++D   + NN      +     V++  A+K  +   + +TL         +S  
Sbjct: 14  IKTPFLIMDMDYVRNNY--FDIVSHVRNVQVFYAVKANSHPRIIETLRDLGSNFDVASRG 71

Query: 62  EVMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+          E  ++       +    A     D    ++  ++ K    A       
Sbjct: 72  EIEKLLALGISPERMSFGNTIKKVEDIAYAYSVGIDYYAVDSEMEVEKIAAHAPGSKVYG 131

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
            +  +       + L+              +  +    +  G+ FH   +N +   +   
Sbjct: 132 RIATSGGD--CDWPLSRKFGTDVGHVISIMEYADQLGLDAYGVSFHVGSQNYNVNSWDDA 189

Query: 179 LKNIEKEF---GHFITQIEWISLGGGIH--FTDKDYPVKDFCQRLKEFSEKYSVQI---- 229
           +++  + F         +  ++LGGG+      +   VK +   +    +KY   +    
Sbjct: 190 IRDASEVFKTLRAKNINLRMLNLGGGMPVKHVREIKSVKSYGDIINRALDKYMSFVPDLE 249

Query: 230 -YLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYPNT-- 285
            ++EPG ++V N+  L + V+  S+   ++ V +D+ V   + + +       +      
Sbjct: 250 LFIEPGRSMVGNSAILVSQVILRSKKGSEDWVYIDAGVFHGLTETIEGFRYEVLTEGKVD 309

Query: 286 -GPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343
               +  + G +C + D           +  GD + F +   Y       FNGI+ P + 
Sbjct: 310 DTKISFHLAGPTCDSVDTIYHEIDLPKNIGYGDILYFINAGAYTTEYATNFNGIDAPRVL 369

Query: 344 VKNV 347
               
Sbjct: 370 FVED 373


>gi|296124036|ref|YP_003631814.1| ornithine decarboxylase [Planctomyces limnophilus DSM 3776]
 gi|296016376|gb|ADG69615.1| Ornithine decarboxylase [Planctomyces limnophilus DSM 3776]
          Length = 392

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 59/355 (16%), Positives = 117/355 (32%), Gaps = 22/355 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP   + +  +  N +         GV+L  A K      +  TL +        S+ E
Sbjct: 35  GTPLMCVSRSVVARNYEILQ--AGLPGVELFYAAKSNPDLTILRTLRRLGGSVDICSVGE 92

Query: 63  VMLGH-EKFGGET--HAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +       F  E   H +     D  +    +     +++  ++L K       +   + 
Sbjct: 93  LKAALQAGFTPEQMLHTHPCKTVDNLMTCYEAGVRLFVYDNATELKKVHRLTPDVGLLLR 152

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           + ++ + S           P          +      NV G+ FH   +      +   L
Sbjct: 153 VAMSSASSMINLSAKFGCAPSEA--VDLLRQARELGMNVRGISFHVGSQTLEPGDYDRAL 210

Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKD------YPVKDFCQRLKEFSEKYSVQIY 230
             + + F         +E + +GGG+    ++             Q L+       V++ 
Sbjct: 211 AKVRQIFDDAACEGIDLEILDIGGGMPAPYREAIISLETYCDIVRQSLEIHFGDLPVRVI 270

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV------DSSVEAHVPDYLLYQESATIYPN 284
            EPG  I  +T TL T+V+  S                 S    V D+  +   A  + +
Sbjct: 271 AEPGRVISADTQTLITSVIGKSVRPNGATQYIIDDGLYGSFSGKVYDHTDFNLMAENHLD 330

Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
              +  +V G +C + D+         ++IG+ I    +  Y     + FNG+++
Sbjct: 331 RPCFPCVVAGPTCDSTDVVSRDQELPNLEIGELILVPSMGSYTNASGSTFNGLDL 385


>gi|322790208|gb|EFZ15207.1| hypothetical protein SINV_04085 [Solenopsis invicta]
          Length = 479

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 58/371 (15%), Positives = 115/371 (30%), Gaps = 25/371 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y++D   ++          K   V+   A+KC     + + L         +S  E+  
Sbjct: 36  FYVLDIGDIVLKHQIWKE--KLPRVEPYYAVKCNDNLIVIEVLAALGINFDCASKNEINK 93

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                       +    K        +     T+  +  S+L+K K         I +R 
Sbjct: 94  VLSLGVDSSRIIFANPAKPASHIRHAAAVRVETMTVDNESELHKIKKLFPSAKVVIRIRC 153

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           +  ++     +     P  R          +   NV G  FH     +    F   + + 
Sbjct: 154 DAEMAQCPLGMKFGCDP-VREAPNLLHLAYNLGLNVVGFSFHVGSGCQDPPVFYRAIHHC 212

Query: 183 EKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV----QIYLEPGE 235
           +  F        +   + LGGG    DK   +    + + +  ++Y       +  EPG 
Sbjct: 213 KMLFDMATDLGFKPYLLDLGGGYP-GDKGTSIDKIAEVINKALDEYFNTDAVHVIAEPGR 271

Query: 236 AIVTNTTTLNTTVLD-----------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
             V +  TL T++                       V  S    + D+            
Sbjct: 272 FYVASAFTLATSIHSKRSIRGDSNAVTHNMYYINDGVYGSFNCLLYDHQHVTPIPLKNGC 331

Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344
                + V G +C   D   E      +++G+ I FE++  Y +   + FNG  +P + +
Sbjct: 332 GKMIASSVWGPTCDGLDRIVENIMLHDMELGEWIIFENMGAYTLPVASPFNGFPIPKVHI 391

Query: 345 KNVDGTIKAIR 355
              +     ++
Sbjct: 392 VADEDIWLLLK 402


>gi|86359219|ref|YP_471111.1| ornithine decarboxylase protein [Rhizobium etli CFN 42]
 gi|86283321|gb|ABC92384.1| probable ornithine decarboxylase protein [Rhizobium etli CFN 42]
          Length = 506

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 48/359 (13%), Positives = 105/359 (29%), Gaps = 33/359 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   +  N     +   ++   +  A+K   A  +   L         +S+ E+ 
Sbjct: 147 PCLVVDLDVIRENFHAFRHAMPDSA--IYYAVKANPAPEVLKLLAGLGSNFDCASVAEIE 204

Query: 65  LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +  E        +Y      +     A          ++  ++ K    A        + 
Sbjct: 205 MALEAGATAARISYGNTIKKERDVARAHALGVSLFAVDSHEEVEKISRAAPGARVFCRVL 264

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179
            +   +           P   +       + +    +   G+ FH   +      + + L
Sbjct: 265 TDGEGAEWPLSRKFGCVPQMAVDV----LVYAHQLGLQSYGVSFHVGSQMTKVDAWDSAL 320

Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIY 230
            + ++ F         ++ +++GGG                    Q L+        Q  
Sbjct: 321 ADAKRVFVQLAKQGIHLQMVNMGGGFPTRYLRDVPSAEAYGKSIYQALRTHFGNQIPQTI 380

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282
           +EPG  +V N   +   V+ IS+   N               +   + + + Y       
Sbjct: 381 IEPGRGMVGNAGVIKAEVVLISKKSDNDDARWVFLDIGKFGGLAETMDEAIRYPIRTERD 440

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRKNW-FNGI 337
            +      ++ G +C + D+  E +       + IGD +  E    Y        FNG 
Sbjct: 441 GDEM-EPCVIAGPTCDSADVLYEKNLYPLPLSLTIGDEVLIEGTGAYTTTYSAVAFNGF 498


>gi|290986807|ref|XP_002676115.1| predicted protein [Naegleria gruberi]
 gi|284089715|gb|EFC43371.1| predicted protein [Naegleria gruberi]
          Length = 1020

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 54/384 (14%), Positives = 107/384 (27%), Gaps = 40/384 (10%)

Query: 5    PYYLIDKQKLLNNLDTALYIRKNAGV---KLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            P Y+ D  +   N    + I    G     +  A+K      +         G    S+ 
Sbjct: 638  PLYVYDVDQFYANAQKLINISTKCGGPVDTIFFAIKSNPNVEILKIFEGIGFGLECVSID 697

Query: 62   EVMLGHEKFG---GETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            EV +    F         +   +   +     +S    +  +++  L  + +      K 
Sbjct: 698  EVRMVCNLFPNIDKSRILFTPNFAPKKEYREAISLGVMLTIDSLYPLMNWSEL--LRGKS 755

Query: 118  IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKS 171
            + LRI+P            +   S+ G    D  ++          V GL  H       
Sbjct: 756  VLLRIDPGAGKGHHAKVKTSGVQSKFGIHISDIPQAIELCEQFSITVMGLHAHVGSGILD 815

Query: 172  FLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDY-----PVKDFCQR---LK 219
                         +           ++ I  GGG+      Y      + +  +     K
Sbjct: 816  EAEAWKKTATTLTQLISEYPKLAKDVKLIDCGGGLGVPYVPYKQTELDLGEVAKAMTEFK 875

Query: 220  EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQES 278
              +   +V++ +EPG  +  N   L   V  I        + +++ + + +   L     
Sbjct: 876  LNNNPTNVKLCMEPGRFLTANAGVLLARVTQIKNKNFKLFIGIETGMNSLIRPTLYNSHH 935

Query: 279  ATI-----------YPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326
              +            P      A + G  C +GD+FG         + GD +       Y
Sbjct: 936  EIVNLSKISNPDSDDPAESTMVADIVGPICESGDVFGNDRPISSETREGDVLCICTAGSY 995

Query: 327  NINRKNWFNGINMPTIAVKNVDGT 350
              +  + +N               
Sbjct: 996  GFSMSSNYNNRAPAKEVFIPSSKK 1019


>gi|6979656|gb|AAF34583.1|AF212867_1 ornithine decarboxylase [Paracoccidioides brasiliensis]
          Length = 447

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 58/359 (16%), Positives = 105/359 (29%), Gaps = 31/359 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y+ D  ++               VK   A+KC     +   + Q  +G   +S  E+ 
Sbjct: 69  PFYVADLGQVYRQHIRWKKNLGR--VKPFYAVKCNPDPQILRLMVQLGNGFDCASKAEID 126

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
              +         Y    K        S          +    +K K      ++ LRI 
Sbjct: 127 YALDVGVDPSRIIYAQPCKTKSFLRYASQVGVKQMTFDNSDELYKIKEMCPDAELYLRIL 186

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S S   L+        +     +  +    NV G+ FH     +    F   +++  
Sbjct: 187 TDDSASLCRLSMKFGASLSVARSLLELAKELKLNVIGVSFHVGSGAEDPKSFVKAVEDSR 246

Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
             F         ++ + +GGG      +         L E+   + ++I  EPG   V +
Sbjct: 247 FVFDQAAEVGFDLKVLDVGGGFSEDTFERFAATLSDALDEYFPPH-IRIIAEPGRYYVAS 305

Query: 241 TTTLNTTVLD----------------------ISENIKNLVIVDSSVEAHVPDYLLYQES 278
             TL   V+                       I  N        + +  H          
Sbjct: 306 AFTLAANVIARRDVSLEMSDSDSTAGATEAYMIYLNDGVYGNFSNIIFDHQHPVPQILTM 365

Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
            +      P    + G +C   D+  E      + +G+ + FE++  Y       FNG 
Sbjct: 366 ESRVC--APIEYSIWGPTCDGIDLICERIALPELDVGNWLYFENMGAYTKCSATRFNGF 422


>gi|15644616|ref|NP_229669.1| ornithine decarboxylase [Thermotoga maritima MSB8]
 gi|148270058|ref|YP_001244518.1| Orn/DAP/Arg decarboxylase 2 [Thermotoga petrophila RKU-1]
 gi|281412061|ref|YP_003346140.1| Ornithine decarboxylase [Thermotoga naphthophila RKU-10]
 gi|4982459|gb|AAD36935.1|AE001824_4 ornithine decarboxylase [Thermotoga maritima MSB8]
 gi|147735602|gb|ABQ46942.1| ornithine decarboxylase [Thermotoga petrophila RKU-1]
 gi|281373164|gb|ADA66726.1| Ornithine decarboxylase [Thermotoga naphthophila RKU-10]
          Length = 388

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 56/363 (15%), Positives = 116/363 (31%), Gaps = 18/363 (4%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           ++KTP+ L D   +           K A   +  A+K  +   +   L +       +S 
Sbjct: 12  VVKTPFLLFDLSVVEKKYLEMKAALKKAD--IYYAVKANSHPRIISLLARLGSNFDVASK 69

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E+         G+  ++    K  E  A        +F   S++   K         + 
Sbjct: 70  GEIEKLLALGVDGKRMSFGNTIKREEDIAFAYKNGIRLFAVDSEMEVEKVAINAPGSFVF 129

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +R+    + + + L+           +             GL FH   +N +   +   +
Sbjct: 130 VRVETDGADADWPLSRKFGTNPEHALQLLSYASKMKLIPAGLSFHVGSQNLNPESWKKAI 189

Query: 180 KNIEKEFGH---FITQIEWISLGGGIH--FTDKDYPVKDFCQRLKEFSEKYSVQIY---- 230
           +   + F         +  +++GGG     T     +++  + ++E  ++    ++    
Sbjct: 190 EIAGRVFKKAMRSGLNLFLLNVGGGFPVQHTKPIPSMEEIGKAIEEAIDENLWFVHNLKV 249

Query: 231 -LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP----DYLLYQESATIYPNT 285
             EPG  +V     L T VL  SE      +   +   H          Y+         
Sbjct: 250 IAEPGRYMVGEAGWLVTKVLLKSERSGEKWVYIDAGVFHGLAETIQNFEYEIRVLGKERE 309

Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344
                 + G +C + D+  +  F    + + D + F +   Y +     FNGI  P +  
Sbjct: 310 ELEEYHLAGPTCDSVDVIYDRIFLPKSITLNDLVCFINAGAYTVEYNTRFNGIEPPKMVF 369

Query: 345 KNV 347
              
Sbjct: 370 IEE 372


>gi|227498854|ref|ZP_03928994.1| lysine decarboxylase [Acidaminococcus sp. D21]
 gi|226904306|gb|EEH90224.1| lysine decarboxylase [Acidaminococcus sp. D21]
          Length = 391

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 52/360 (14%), Positives = 109/360 (30%), Gaps = 21/360 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP  ++  +++  N D           ++  A+K      + +T+         +S  E
Sbjct: 22  GTPLLVLSLEQIEKNYDILRTHIPQM--RIHYAMKANPDLRILETMIDKNADFDVASDGE 79

Query: 63  VM-LGHEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +  L      GE   Y    K        V +    + F++ S++ K           + 
Sbjct: 80  IRTLASLGVPGEKMIYANPIKTEAGLKACVDAGVTRMTFDSESEICKIAKWVPHATVLLR 139

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           LRI+   ++              L             ++ G+ FH   +  +   +    
Sbjct: 140 LRIDNPKAHVDLNKKFGAPREKAL--SLMRLARQAGLDMAGIAFHVGSQVTTADSYLHAF 197

Query: 180 KNIEKEFGH---FITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEK--YSVQIYLE 232
             + +           +  + +GGG    +    Y +     ++     +      I+ E
Sbjct: 198 DVVHELLEEAKNEGFDLPIMDIGGGFPIPETGVHYNLTAILDQIAARLREDFSDKIIWSE 257

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGP 287
           PG  +      L T V+ ++E    +          +    + D   Y+  +       P
Sbjct: 258 PGRYMAGTAQNLITKVIGVNERNGQVWYFLDDGIYGTFSGVIFDQWDYKLISFKEGEKIP 317

Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
            T    G SC + DI       +P+++ D +       Y       FNG     + +   
Sbjct: 318 ATF--AGPSCDSLDIMFRGKMTEPLEVDDLLLVPVCGAYTSASATTFNGFKKARMVIWED 375


>gi|73979729|ref|XP_856472.1| PREDICTED: similar to Ornithine decarboxylase (ODC) isoform 3
           [Canis familiaris]
          Length = 436

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 58/358 (16%), Positives = 112/358 (31%), Gaps = 16/358 (4%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       +++    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 40  FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSRTIVKTLAAIGTGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        SN    +    S++   K        K+ LRI  
Sbjct: 98  VQSLGVPPERIIYANPCKQVSQIKYASNNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++      +V G+ FH          F   + +   
Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERARELNIDVIGVSFHVGSGCTDPETFVQAISDARC 217

Query: 185 EFGH-----FITQIEWISLGGG----IHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
            F           ++           I    + Y    F   +   ++K  ++   +   
Sbjct: 218 VFDMGITSVINPALDKYFPADSGVRVIAEPGRYYVASAFTLAVNIIAKKLVLKEQTDYSA 277

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGR 295
            +  + ++  T +  +++ +           AHV   L  +           Y+  + G 
Sbjct: 278 FLDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVKPLLQKRPKPD----EKYYSTSIWGP 333

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353
           +C   D   E      + +GD + FE++  Y +   + FNG   PTI       T + 
Sbjct: 334 TCDGLDRIVERCDLPEIHVGDWMLFENMGAYTVAAASTFNGFQRPTIYYVMSGPTWQL 391


>gi|254502587|ref|ZP_05114738.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein
           [Labrenzia alexandrii DFL-11]
 gi|222438658|gb|EEE45337.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein
           [Labrenzia alexandrii DFL-11]
          Length = 376

 Score =  161 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 51/365 (13%), Positives = 113/365 (30%), Gaps = 30/365 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   + +N +            +  A+K   A  + + L         +S+ E+ 
Sbjct: 17  PCVVVDLDIVRDNFEAFARSL--PDTSVYYAVKANPAPEILNLLENLGSSFDCASVGEIE 74

Query: 65  LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +           +Y      +     A          + V ++ K    A     ++  R
Sbjct: 75  MVLATGADASRISYGNTIKKERDIARAFEFGVRLFAVDCVEEVEKIARVA--PGSRVFCR 132

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +      +++ L+       ++     D          G+ FH   +  +   +   L  
Sbjct: 133 VLCDGVGAEWPLSRKFGCDPQMAPDVLDHAHRLGLEAYGVSFHVGSQQANLQAWDFALAM 192

Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTD----KDYPVKDFC--QRLKEFSEKYSVQIYLE 232
               F        +++ +++GGG            P       Q L +          +E
Sbjct: 193 AAGVFREMALRGIELKMVNMGGGFPTRYLKDVPGVPRYGEAIFQALSKHFGNRLPSTIIE 252

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPN 284
           PG  +V N   + T V+ IS+  +   +            +   + + + Y    T    
Sbjct: 253 PGRGMVGNAGLIETEVVLISKKSETDEVRWVYLDIGKFHGLAETMDEAIRYP-IKTPRDG 311

Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGI-NM 339
                 ++ G +C + D+  E   +     + IGD++  E    Y     +  FNG   +
Sbjct: 312 DRTAPCVLAGPTCDSVDVLYEKTPYELPVSLSIGDKVLIEACGAYTTTYSSVGFNGFAPL 371

Query: 340 PTIAV 344
            +  +
Sbjct: 372 ASYVI 376


>gi|150397970|ref|YP_001328437.1| Orn/DAP/Arg decarboxylase 2 [Sinorhizobium medicae WSM419]
 gi|150029485|gb|ABR61602.1| Orn/DAP/Arg decarboxylase 2 [Sinorhizobium medicae WSM419]
          Length = 377

 Score =  161 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 47/359 (13%), Positives = 106/359 (29%), Gaps = 33/359 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   + +N     +   ++   +  A+K   A  +   L         +S+ E+ 
Sbjct: 18  PCLVVDLDVVRDNFKAFRHALPDSA--IYYAVKANPAPEVLRLLASLGSNFDCASVAEIE 75

Query: 65  LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +           +Y      +     A          ++  ++ K    A        + 
Sbjct: 76  MALDAGATPNRISYGNTIKKERDVARAHTLGISLFAVDSHEEVEKIARAAPGARVFCRVL 135

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179
            +   +           P   +       + +    +   G+ FH   +      + A L
Sbjct: 136 TDGEGAEWPLSRKFGCVPQMAVDV----LVYAHQLGLASYGVSFHVGSQMTKLDAWDAAL 191

Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIY 230
            + ++ F        +++ +++GGG                      LK+       +  
Sbjct: 192 ADAKRVFVQLAKQGIELKMVNMGGGFPTKYLRDVPSAEAYGQAIFGALKKHFGNNIPETI 251

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282
           +EPG  +V N   +   V+ +S+   N               +   + + + Y    T  
Sbjct: 252 IEPGRGMVGNAGVIKAEVVLVSKKSDNDSHRWVFLDIGKFGGLAETMDEAIRYPIR-TAR 310

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRKNW-FNGI 337
                   ++ G +C + D+  E +       + IGD +  E    Y        FNG 
Sbjct: 311 DADAMEPCVLAGPTCDSADVLYEKNMYPLPISLTIGDEVLIEGTGAYTTTYSAVAFNGF 369


>gi|307194296|gb|EFN76671.1| Ornithine decarboxylase [Harpegnathos saltator]
          Length = 473

 Score =  161 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 56/373 (15%), Positives = 110/373 (29%), Gaps = 26/373 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y++D   ++          K   V+   A+KC     + + L     G   +S  E+  
Sbjct: 36  FYVLDIGDIVRKHQIWKE--KLPRVEPYYAVKCNDNLIVIEVLAALGIGFDCASKGEINK 93

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       +    K        +          ++    K K      KI LRI  
Sbjct: 94  VLSVGVDSSRIIFANPAKPASHIRHAAAMRVETMTVDNESELHKIKKLFPTAKIVLRIRC 153

Query: 125 SVSYSKFILADPNRPFSRL-GEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
               ++  L                    +   NV G+ FH     +    +   +++ +
Sbjct: 154 DAEIAQCPLGMKFGCDPITEAPNLLRLARALGLNVVGISFHVGSGCQDPPVYHRAIRHSK 213

Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV----QIYLEPGEA 236
             F        +   + +GGG     K   +      + +  ++Y       +  EPG  
Sbjct: 214 ILFDVAIDLGFKPYLLDIGGGYPGN-KGTSIDKMADTINQALDEYFNTDAVHVIAEPGRF 272

Query: 237 IVTNTTTLNTTVLD--------------ISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
            V +  TL T++                          V  S    + D+          
Sbjct: 273 YVASAFTLATSIHSKRSVRGDDSSSGAITHNMYYINDGVYGSFNCLLYDHQHVTPLPLKD 332

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
                  + + G +C   D   E      +++GD I FE++  Y +   + FNG  +P +
Sbjct: 333 GCGKLIPSSIWGPTCDGLDKVVENILLYDMELGDWILFENMGAYTLPVASPFNGFPVPKV 392

Query: 343 AVKNVDGTIKAIR 355
            V   +     ++
Sbjct: 393 HVVADESIWLLLK 405


>gi|271498687|ref|YP_003331712.1| Orn/DAP/Arg decarboxylase 2 [Dickeya dadantii Ech586]
 gi|270342242|gb|ACZ75007.1| Orn/DAP/Arg decarboxylase 2 [Dickeya dadantii Ech586]
          Length = 446

 Score =  161 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 50/398 (12%), Positives = 105/398 (26%), Gaps = 35/398 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+   ++L   L         A   +  +LK      +  TL +   G    S  
Sbjct: 38  VGTPFYVYSARQLRRQLQHLYQQLP-ADTAVYYSLKANPNLSVVKTLVEQGTGCEVCSPA 96

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118
           E+          +   Y    K     +   +C    I+  +V++L+     A +     
Sbjct: 97  ELDTALAAGVLPQHILYVGPGKSLAALSHAMDCGIRAIVAESVTELDNINQLAAQAGTVQ 156

Query: 119 GLRINPSVS-YSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
            + +  + +  S+      +   ++ G                    V G   +      
Sbjct: 157 TVALRINPNFSSEHARLVMSGKPTQFGMTLDTLQTVLTCLSRWPSLAVRGFHVYLGTRIL 216

Query: 171 SFL----CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFS 222
           +          +L+        +   ++++ +GGG             +      +    
Sbjct: 217 NAQAIANNTRNILQLALNLRDQYQLTLDFVDIGGGFGVPYFPKETPLDLPALGDAIAPIV 276

Query: 223 EKYSV-----QIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAH-------- 268
             +       QI +E G  +V       T V  +     K   I D     H        
Sbjct: 277 ADFRRQATNTQIIIELGRYLVAEAGLFVTRVNTLKTAGGKTFAICDGGANCHSAAAGLNS 336

Query: 269 VPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
           +              +       V G  C   D+ G+      + + D I       Y +
Sbjct: 337 MLRKNFPLLRLGDNHSRPVQPYQVSGPLCTPTDLLGDNVLLPTLAVNDLIGIAHSGAYGL 396

Query: 329 NRKNW-FNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
                 F     P   + +    I+  +  +       
Sbjct: 397 TASPGLFLSFGYPAEVMVDGHRLIQIRQPETTAQLLAR 434


>gi|5738966|dbj|BAA83427.1| ornithine decarboxylase [Nicotiana tabacum]
          Length = 432

 Score =  161 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 50/362 (13%), Positives = 112/362 (30%), Gaps = 26/362 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y++D  ++++ +D          ++   A+KC         L+        +S  E+ 
Sbjct: 65  PFYVLDLGEVVSLMDQWKSAL--PNIRPFYAVKCNPEPSFLSILSAMGSNFDCASRAEIE 122

Query: 65  LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                    +   +    K       A     +   +++  ++ K +    K    + ++
Sbjct: 123 YVLSLGISPDRIVFANPCKPESDIIFAAKVGVNLTTYDSEDEVYKIRKHHPKSELLLRIK 182

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE----NKSFLCFSA 177
                +    +            E      ++    V+G+ FH        N      +A
Sbjct: 183 PMFDGNARCPMGPKY-GALPEEVEPLLRAAQAARLTVSGVSFHIGSGDADSNAYLGAIAA 241

Query: 178 MLKNIEKEFGHFITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
             +  E      ++++  + +GGG           V       + F ++  + I  EPG 
Sbjct: 242 AKEVFETAAKLGMSKMTVLDVGGGFTSGHQFTTAAVAVRSALKQHFDDQPELTIIAEPGR 301

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESA---------TI 281
                  TL TT++      +            S+   + D+     +            
Sbjct: 302 FFAETAFTLATTIIGKRVRGELREYWINDGLYGSMNCVLYDHATVNATPLAVLSNRTNVT 361

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
              +  +   V G +C A D     +    +++ D + F ++  Y     + FNG N   
Sbjct: 362 CGGSKTFPTTVFGPTCDALDTVLRDYQLPELQVNDWLVFPNMGAYTKAAGSNFNGFNTCA 421

Query: 342 IA 343
           I 
Sbjct: 422 IV 423


>gi|261338624|ref|ZP_05966508.1| diaminopimelate decarboxylase [Bifidobacterium gallicum DSM 20093]
 gi|270276343|gb|EFA22197.1| diaminopimelate decarboxylase [Bifidobacterium gallicum DSM 20093]
          Length = 479

 Score =  161 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 55/442 (12%), Positives = 110/442 (24%), Gaps = 80/442 (18%)

Query: 3   KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
            +P Y+ID  ++ +              N    +  A K F    +   + Q      + 
Sbjct: 34  GSPLYVIDTDEVRDRARAFVEAAANAFHNTTTHVSFAGKAFLCKEIVRIVVQQGMFVDTC 93

Query: 59  SLYEVMLGHE-KFGGETHAYNVAYKDCEIDA--VLSNCDTIIFN--TVSQLNKFKDKAQK 113
           SL E+ +       G     +   K        +    + I+ +    +       +   
Sbjct: 94  SLGEMTIALAAGVPGRRLVLHGNNKSDAEIELAIREGFNKIVIDEPNEAARIAAIAQRLG 153

Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKC------------------------KD 149
              ++ LR+   +               + G                            +
Sbjct: 154 KRARVMLRVTSGIHAGGHEFVSTAHEDQKFGVALLPVNADLQVVDSVVERIGGHMGDSPE 213

Query: 150 KI--------------------ESEIKNVNGLMFHNNCENK----SFLCFSAMLKNIEKE 185
            +                     ++   + G+  H                 M+   +  
Sbjct: 214 LLEALNIIAQGPAIAALQGIAEHADWLELVGVHSHIGSNIHDAEAFIQAARRMMLLRKTF 273

Query: 186 FGHFITQIEWISLGGGIHFTDKDYPVKDFCQ-----------RLKEFSEKYSVQIYLEPG 234
                  +  + LGGG      D                    +       +  I  EPG
Sbjct: 274 HAVAGYLMPEVDLGGGYSVAYTDGEDLMDVDRELSRLAASVSAVNRALGMPAPTISFEPG 333

Query: 235 EAIVTNTTTLNTTV-------LDISENIKNLVIVDSSVEAHVPDYLLYQES----ATIYP 283
             IV         V       L +    +  V VD  +  ++   L   +     A    
Sbjct: 334 RWIVAPAGVTLYRVGTVKTVELSVDPAERTYVSVDGGMSDNIRPALYGADYTAVLANRES 393

Query: 284 NTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
              P  + V G  C +GDI     F    +  GD ++      Y     + +N   +P +
Sbjct: 394 TAAPRLSRVVGIHCESGDIVVNNVFLPDDITRGDVLAVPVTGAYGRTMASNYNQQLIPAV 453

Query: 343 AVKNVDGTIKAIREFSYNDYYN 364
              + +G    +R  +  D  +
Sbjct: 454 VGVSSEGAHVMMRRQTLEDLLD 475


>gi|271501109|ref|YP_003334134.1| diaminopimelate decarboxylase [Dickeya dadantii Ech586]
 gi|270344664|gb|ACZ77429.1| Diaminopimelate decarboxylase [Dickeya dadantii Ech586]
          Length = 417

 Score =  161 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 54/377 (14%), Positives = 104/377 (27%), Gaps = 32/377 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            ++ D   L  ++   +      GV+L  A+K  +   + D +   + G   SS  E+  
Sbjct: 25  AFVYDLAALRQHVSEVMAALP-PGVELYYAIKANSEKPILDAIAPLVHGFEISSGGEIDR 83

Query: 66  GHEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                  +   ++           A+    + +   +  ++ + + +AQ+      + I 
Sbjct: 84  VAGCATAKPFVFSGPGKLDSDFDLALEHGVEAVHVESRHEIARLQQRAQQHGVVQPVFIR 143

Query: 124 PSVS---------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174
            +                        + L +  +D   +    + G   H      S   
Sbjct: 144 INPELASSLTSKLAMAGTPTPFGMDEADLPDAVRDVDNASHLQLKGFHVHAMSHQMSVER 203

Query: 175 FSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKY 225
              +L      +  +        QI  +++GGGI       + +     C  L+    + 
Sbjct: 204 HQQLLDLYLTRWPQWKALSAHPQQITHLNVGGGIGVPYLTPERFDWSALCDYLRVRLAQQ 263

Query: 226 SVQIY--LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282
                   EPG  I          VLD   +     +V                +   I+
Sbjct: 264 PDVPVVRFEPGRFISAYCGYYAIEVLDKKRSHGKHFLVCRGGTHQFRLPVAQGHDHPIIH 323

Query: 283 PNTGP-------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WF 334
               P           V G+ C   D+         V IGD +       Y  N  +  F
Sbjct: 324 LPLAPAQPAGETRDWTVVGQLCTPKDVLSRDQRLTDVNIGDLLVLPLAGAYGYNISHADF 383

Query: 335 NGINMPTIAVKNVDGTI 351
                P        G I
Sbjct: 384 LCHPRPAQYFITDAGVI 400


>gi|6981302|ref|NP_036747.1| ornithine decarboxylase [Rattus norvegicus]
 gi|118382|sp|P09057|DCOR_RAT RecName: Full=Ornithine decarboxylase; Short=ODC
 gi|56787|emb|CAA30765.1| ornithine decarboxylase [Rattus norvegicus]
 gi|205804|gb|AAA41737.1| ornithine decarboxylase (EC 4.1.1.17) [Rattus norvegicus]
 gi|205808|gb|AAA66164.1| ornithine decarboxylase [Rattus norvegicus]
 gi|51261226|gb|AAH78882.1| Ornithine decarboxylase 1 [Rattus norvegicus]
 gi|149050981|gb|EDM03154.1| ornithine decarboxylase 1 [Rattus norvegicus]
 gi|225925|prf||1403320A Orn decarboxylase
          Length = 461

 Score =  161 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 62/382 (16%), Positives = 118/382 (30%), Gaps = 33/382 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       +++    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 40  FYVADLGDVLK--KHLRWLKALPRVTPFYAVKCNDSRAIVSTLAAIGTGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        ++    +    S++   K        K+ LRI  
Sbjct: 98  VQGLGVPPERIIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKAKLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++ +    +V G+ FH          F   + +   
Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQAVSDARC 217

Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     V+I  EPG 
Sbjct: 218 VFDMGTEVGFSMYLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPSDSGVRIIAEPGR 277

Query: 236 AIVTNTTTLNTTVLDISE-------------------NIKNLVIVDSSVEAHVPDYLLYQ 276
             V +  TL   ++                              V  S    + D+   +
Sbjct: 278 YYVASAFTLAVNIIAKKTVWKEQTGSDDEDESNEQTLMYYVNDGVYGSFNCILYDHAHVK 337

Query: 277 E--SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                   P+   Y++ + G +C   D   E      + +GD + FE++  Y +   + F
Sbjct: 338 ALLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCSLPEMHVGDWMLFENMGAYTVAAASTF 397

Query: 335 NGINMPTIAVKNVDGTIKAIRE 356
           NG   P I         + +++
Sbjct: 398 NGFQRPNIYYVMSRSMWQLMKQ 419


>gi|303239984|ref|ZP_07326506.1| Orn/DAP/Arg decarboxylase 2 [Acetivibrio cellulolyticus CD2]
 gi|302592463|gb|EFL62189.1| Orn/DAP/Arg decarboxylase 2 [Acetivibrio cellulolyticus CD2]
          Length = 412

 Score =  161 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 65/399 (16%), Positives = 117/399 (29%), Gaps = 36/399 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D   +    +T          ++  + K     G+   +     G   +S+ E
Sbjct: 14  GTPSYMYDGDCIEKQYNTLRSFLPE-NFQIFYSAKANPLLGICQIMKNMGSGIEVASVGE 72

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + L     F  E   +    K  +    AV SN   I      +       A++  K + 
Sbjct: 73  LYLAQKAGFTPEQIIFTSPGKTAQELIYAVESNIYCINIECTEEAVLLNQIAEERSKIVN 132

Query: 120 LRINPSVSYS-KFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE--- 168
           + +  +  ++ +      +   S+ G          +         + G+  +   +   
Sbjct: 133 IAVRVNPDFNLQGSRIKMSGVSSQFGIDQGEVKNAFETLKTLANIKLIGIHVYCGTQVLS 192

Query: 169 -NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
                 CF   +K        F   +E++ LGGG                LK+   K   
Sbjct: 193 SQSLLECFEEEIKLALALSDEFDFSLEFLDLGGGFGIPYFKNEYPLDIVLLKDGMSKLIR 252

Query: 228 QI---------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-------PD 271
                       +E G  ++       T VL + +   +  IV      H          
Sbjct: 253 NYGTRLEKTRVAVESGRFLLAECGLYLTKVLYVKKCKGSKFIVCDGGSNHHASSAFLGRH 312

Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                    +  +       V G  C   D+ G+      ++  D I+ E    Y +   
Sbjct: 313 VRNNFPMRVLEKSENCEEVTVVGPLCTPTDVIGQKVLLPTIETEDIIAIEKSGAYGLTHS 372

Query: 332 N-WFNGINMPTIAVKNVDGTIKAIREFS-YNDYYNN-LS 367
              F    MP I + +  G I   RE     D+  N LS
Sbjct: 373 PVMFLSHEMP-IELVSYKGEINVARERGRKEDFLKNQLS 410


>gi|311258828|ref|XP_003127815.1| PREDICTED: ornithine decarboxylase-like [Sus scrofa]
          Length = 459

 Score =  161 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 54/371 (14%), Positives = 98/371 (26%), Gaps = 37/371 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+ + +   L               V    A+KC     +   L     G   +S  E+ 
Sbjct: 66  PFMVANLDVLPRRHQLFHQALPR--VSPFYAVKCNNNPWVLRVLAALGTGFDCASQGELE 123

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                        Y    K        ++    +    S+    K        ++ LR+ 
Sbjct: 124 QVLGLGVPPSRIIYANPCKPVSHILYAAHHGVQLLTFDSEEELIKVAQHYPGARLVLRLW 183

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHN-------------NCENK 170
              S S F L+        L E            V G                       
Sbjct: 184 TQDSESIFSLSTKFGARLELCEHLLKSARDLGVAVVGTSTGTADSERTXXXXXGXXXPAT 243

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD----FCQRLKEFSEKYS 226
           +     A  + + +        + ++ +GGG    +   P  +         ++F E   
Sbjct: 244 TVQQAIADCRCLFEMGLRIGHDMNFLDIGGGFPGEEGLDPKFEEXVINATLAQDFPEGSG 303

Query: 227 VQIYLEPGEAIVTNTTTLNTTVL----------DISENIKNLVIVDSSVEAHVPDYLLYQ 276
           V+I  EPG        T+   ++                             + D     
Sbjct: 304 VEIIAEPGRFYAAPVCTIAVNIIAKKAVVQPGGHRKLLYYLNDGYYGDFRVFLRDPE--P 361

Query: 277 ESATIYPNTGPYT----AMVCGRSCLAGD-IFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
           +   +    GP       ++ G +C A D +F E      + +GD + F  +  Y     
Sbjct: 362 KIPIVVKELGPEPPLFSCILFGPTCDAFDKLFLEELQLPELNVGDWLVFPTMGAYTNVMT 421

Query: 332 NWFNGINMPTI 342
           + FNG    +I
Sbjct: 422 STFNGFPPASI 432


>gi|288574389|ref|ZP_06392746.1| Ornithine decarboxylase [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570130|gb|EFC91687.1| Ornithine decarboxylase [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 395

 Score =  161 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 62/369 (16%), Positives = 119/369 (32%), Gaps = 28/369 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP  L+D + +  N D           K+  A+K      +   L +       +S+ E
Sbjct: 32  ETPCLLLDLKSVERNFDDLTRTMPY--AKIHYAVKANPHEAILRMLIRKGCNFDFASINE 89

Query: 63  V--MLGHEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           +  ML  +    E  +Y       +    A          ++   L +    A       
Sbjct: 90  LDTMLALD-TSPERLSYGHTIKKSEHIAYAYEKGVRLFATDSEDDLRRIAKNAPGSQVFF 148

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
            L +  S +           P +    K     +       GL FH   + +    +   
Sbjct: 149 RLFMECSGADWSLSRKFGAHPDTIF--KLIRLSKELDVIPWGLSFHVGSQQRDIGQWGNA 206

Query: 179 LKNIEKEF---GHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYS----VQI 229
           + +    F        Q++ I+LGGG          P++ + + +  F  +       +I
Sbjct: 207 IASCRYLFDSAKELGIQLKLINLGGGFPAKYIQPTVPLEIYAKEVTRFLSEDFPEGIPEI 266

Query: 230 YLEPGEAIVTNTTTLNTTVL-----DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
            +EPG ++V +   L T V+     +       L I                +       
Sbjct: 267 IIEPGRSLVGDCGILTTQVVLKSKKESYNPYSWLYIDAGKFGGLYETIDESIKYPIYSEK 326

Query: 285 TGP-YTAMVCGRSCLAGDIFG---EFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGINM 339
            GP    ++ G +C + D+     ++   K ++ GD++ F     Y  +     FNG   
Sbjct: 327 QGPVEEYIIAGPTCDSLDVLYERDKYMLPKNLEEGDKLYFFSTGAYVNSCSLESFNGFKP 386

Query: 340 PTIAVKNVD 348
           P + V + D
Sbjct: 387 PKVYVYDED 395


>gi|170288742|ref|YP_001738980.1| Orn/DAP/Arg decarboxylase 2 [Thermotoga sp. RQ2]
 gi|170176245|gb|ACB09297.1| Orn/DAP/Arg decarboxylase 2 [Thermotoga sp. RQ2]
          Length = 388

 Score =  161 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 55/363 (15%), Positives = 115/363 (31%), Gaps = 18/363 (4%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           ++KTP+ L D   +           K A   +  A+K  +   +   L +       +S 
Sbjct: 12  VVKTPFLLFDLSVVEKKYLEMKAALKKAD--IYYAVKANSHPRIISLLARLGSNFDVASK 69

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E+         G+  ++    K  E  A        +F   S++   K         + 
Sbjct: 70  GEIEKLLALGVDGKRMSFGNTIKREEDIAFAYKNGIRLFAVDSEMEVEKVAINAPGSFVF 129

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +R+    + + + L+           +             GL FH   +N +   +   +
Sbjct: 130 VRVETDGADADWPLSRKFGTNPEHALQLLSYASKMKLIPAGLSFHVGSQNLNPESWKKAI 189

Query: 180 KNIEKEFGH---FITQIEWISLGGGIH--FTDKDYPVKDFCQRLKEFSEKYSVQIY---- 230
           +   + F         +  +++GGG     T     +++  + ++E  ++    ++    
Sbjct: 190 EIAGRVFKKAMRSGLNLFLLNVGGGFPVQHTKPIPSMEEIGKAIEEAIDENLWFVHNLRV 249

Query: 231 -LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP----DYLLYQESATIYPNT 285
             EPG  +V     L T VL  SE      +   +   H          Y+         
Sbjct: 250 IAEPGRYMVGEAGWLVTKVLLKSERSGEKWVYIDAGVFHGLAETIQNFEYEVRVLGKERE 309

Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344
                 + G +C + D+  +       + + D + F +   Y +     FNGI  P +  
Sbjct: 310 ELEEYHLAGPTCDSVDVIYDRILLPKSITLNDLVCFINAGAYTVEYNTRFNGIEPPKMVF 369

Query: 345 KNV 347
              
Sbjct: 370 IEE 372


>gi|93004868|ref|YP_579305.1| ornithine decarboxylase [Psychrobacter cryohalolentis K5]
 gi|92392546|gb|ABE73821.1| ornithine decarboxylase [Psychrobacter cryohalolentis K5]
          Length = 391

 Score =  161 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 56/373 (15%), Positives = 131/373 (35%), Gaps = 34/373 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+ ++D  ++       +        K+  A+K   A  + + L +       +S+YE
Sbjct: 24  ETPFLVVDLNRIKIKYHEMVGFF--PHAKIHYAMKASPAVEVINLLAELGSNFDCASIYE 81

Query: 63  VMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +    +        +Y       +    A     D    ++ + L      A      + 
Sbjct: 82  LDRVLDCGVEPSRISYGNTIKKPEHVKYAFEKGVDLYATDSEADLKNIAKHAPGSKIFVR 141

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177
           + +               +         +  I+++   +   G+ FH   + K    +  
Sbjct: 142 ILVQ---GSDTAEWPLSRKFGCHPNMAIELLIQAQELGLVPYGISFHVGSQQKDVAAWDD 198

Query: 178 MLKNIEKEFGHF----ITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFS-----EKYS 226
            L  ++  F         +++ I+LGGG       +  P+K + + ++ +       +  
Sbjct: 199 ALAKVKYMFDWMKNEEGIKLQMINLGGGFPANYLSEVNPIKVYAEEIQSYLSDDYSAEDM 258

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQ-E 277
            +I LEPG ++V  +  L + V+ IS      +      +          + + + Y   
Sbjct: 259 PEIILEPGRSLVGGSGVLVSDVVLISRKSHTDLTRWVYTDVGLFQGLIETLGEAIKYPVY 318

Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-W 333
           +  +  +T   T ++ G +C + DI  E   +   + ++IGD+I +     Y  +  +  
Sbjct: 319 TPKMETSTSAGTVVLAGPTCDSTDIMYEEAGYQLPEELEIGDKIFWLTTGAYTNSYSSIE 378

Query: 334 FNGINMPTIAVKN 346
           FNG     +   +
Sbjct: 379 FNGFPPLEVVYVD 391


>gi|170045392|ref|XP_001850295.1| ornithine decarboxylase [Culex quinquefasciatus]
 gi|167868455|gb|EDS31838.1| ornithine decarboxylase [Culex quinquefasciatus]
          Length = 440

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 78/376 (20%), Positives = 130/376 (34%), Gaps = 32/376 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P++L+D   ++       ++R+   VK   A+KC     +  TL     G   +S  E+ 
Sbjct: 40  PFHLLDLDDVVR--KHLNWLRELPRVKPFYAVKCNDDESIVKTLALLGTGFDCASKGEIS 97

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                  G E   Y    K  E      N         ++    K        ++ LRI 
Sbjct: 98  QVLGLGVGAERIIYAHPIKAKESLVFARNNGVGKVTFDNECELKKVAKYYPEAELVLRIR 157

Query: 124 PSVSYSKFILADPNRPFSRL-GEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
                    L       +RL G +   K +    NV G+ FH  C +    CF   +K+ 
Sbjct: 158 HDSDKVLISLGKKFGCDARLDGPELIRKAQELGLNVIGVSFHVGCGSLDADCFYNAIKSA 217

Query: 183 EKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-----QIYLEPG 234
           +  F        +   + +GGG    D D P+ +F   +    +++       Q+  EPG
Sbjct: 218 KFLFEFADTVGYRFSLLDIGGGFP-GDVDKPIGEFATAINRALDEFFPNLDGIQVIAEPG 276

Query: 235 EAIVTNTTTLNTTVL---------DISENIKNLVIVDSSVEAHVPDY-------LLYQES 278
              V +   L  T+          D S  ++ +  ++  V   + D+        L +  
Sbjct: 277 RYYVGSAVRLLATINGKKIIRDPADSSRILQVMYYINDGVFGTLFDWVSLRAINDLSRAI 336

Query: 279 ATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
             I         +   V G +C + DI  E        IG+ + FE++  Y I     FN
Sbjct: 337 PIITKQKREKVQFKTTVWGPTCDSTDIVCEDVDFPEHDIGEYLLFENIGAYGITFATNFN 396

Query: 336 GINMPTIAVKNVDGTI 351
           G   PTI +     T 
Sbjct: 397 GFPKPTIQIYVKKQTW 412


>gi|311113374|ref|YP_003984596.1| diaminopimelate decarboxylase [Rothia dentocariosa ATCC 17931]
 gi|310944868|gb|ADP41162.1| diaminopimelate decarboxylase [Rothia dentocariosa ATCC 17931]
          Length = 504

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 54/446 (12%), Positives = 112/446 (25%), Gaps = 84/446 (18%)

Query: 3   KTPYYLIDKQKLLNNLD----TALYIRKNAGVKL--LLALKCFAAWGMFDTLNQYMDGTT 56
            TP Y+  +                     G ++    A K F    +    ++      
Sbjct: 54  DTPQYVFSEDTFRARARGYRQAFKDAFARYGAQVSVYYAGKSFLCTSVARWAHEEGLCLD 113

Query: 57  SSSLYEVMLG-HEKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKA-- 111
           ++S  E+ +    +  G+  A +   K       A+      ++ ++V +L    D    
Sbjct: 114 TASGGELAIALRAQVPGQNIALHGNNKSHGEIVRAIKHGVGRVVADSVDELKLIADVHAE 173

Query: 112 -----------QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGE------------KCK 148
                            + +RI P V  S            + G             +  
Sbjct: 174 LNAERAAAGQEPYPAVPVLIRITPGVHASTHESIATAHEDQKFGMSLQPGTARLAGLEAD 233

Query: 149 DKIESEIKN-------------------VNGLMFHNNCENKSFLCFSAMLK----NIEKE 185
           +                             G+  H   +      F          +   
Sbjct: 234 ELEYWSTTEDESYAMLAAGILTATDSLEFRGIHCHIGSQIFEAQGFEQAADTALTFMHAV 293

Query: 186 FGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-----------SVQIYLEPG 234
              +   +  + LGGG      +       +++                     +  EPG
Sbjct: 294 NQKYGLSLPELDLGGGYGIGYTEADTPRSIEQITVSIADAVAATCVRLGLAIPHMSFEPG 353

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDS----------SVEAHVPDYLLYQESATIYPN 284
            +I   +     TV  I                       +  +    L   + A    N
Sbjct: 354 RSISGPSGVTLYTVGTIKNVSIEDEHGQIRVRRYVSVDGGMSDNARPVLYDADYAVTLAN 413

Query: 285 TGP----YTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINM 339
             P      + V G+ C +GDI   + +    ++ GD ++      Y     + +N ++ 
Sbjct: 414 RAPAGEHVLSRVVGKHCESGDIVVRYCYLPADLRAGDILAVPATGAYCYVLGSNYNYLSR 473

Query: 340 PTIAVKNVDGTIK-AIREFSYNDYYN 364
           P +   +        IR  S ++   
Sbjct: 474 PPVIATSAGEAAHPIIRRQSEDEMLA 499


>gi|300114365|ref|YP_003760940.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Nitrosococcus watsonii C-113]
 gi|299540302|gb|ADJ28619.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Nitrosococcus watsonii C-113]
          Length = 410

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 45/375 (12%), Positives = 103/375 (27%), Gaps = 34/375 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+Y  +++ +   +         + + +  ALK      +   +   +DG   +S+ E+
Sbjct: 37  TPFYAYERRLISERIRHLRAHLP-SEIYIHYALKANPMPALAGHIAPLVDGLDVASIGEL 95

Query: 64  MLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            +        +T ++      D E+   L+    I   +  ++ +    A+K   +  + 
Sbjct: 96  KIALDAGISPKTISFAGPGKSDAELRTSLAAGIIINMESEGEMERIAHLAEKQGYRPKVA 155

Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKS--- 171
           +  + +   K             G   +        + +   +  G    +  +N     
Sbjct: 156 VRVNPNFELKTSGMKMAGGPKPFGIDAERVPAMLARLSALDLDFQGFHIFSGSQNLRAEA 215

Query: 172 -FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF---------CQRLKEF 221
                        +        +  +++GGG                          K  
Sbjct: 216 IIEAQERTFTLALELARSAPAPVRLLNIGGGFGIPYFPGDKPLDLRPIADNLAASLPKVQ 275

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY--------- 272
            +    ++ LE G  +V         V+D   +  ++ ++ +    H             
Sbjct: 276 QQLPEAEVTLELGRYLVGEAGIYVCEVIDRKISRGHVFLITNGGLHHHLAASGNFGQVIR 335

Query: 273 -LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                        +    A V G  C   DI          ++GD I       Y  +  
Sbjct: 336 KNYPVVVGNRVQGSDREIASVVGPLCTPLDILAHRMDLAQAEVGDLIVVFQSGAYGRSAS 395

Query: 332 N-WFNGINMPTIAVK 345
              F G   P   + 
Sbjct: 396 PLGFLGHPAPAEVLV 410


>gi|116515197|ref|YP_802826.1| diaminopimelate decarboxylase [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|116257051|gb|ABJ90733.1| diaminopimelate decarboxylase [Buchnera aphidicola str. Cc (Cinara
           cedri)]
          Length = 416

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 61/395 (15%), Positives = 123/395 (31%), Gaps = 41/395 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP ++ + +            +      +  A K  +   +   + +      + SL E
Sbjct: 25  KTPIWIYNSEI-----IKKQIKKLKKFDIIRFAQKSCSNIHILKLMRKKNIKIDAVSLGE 79

Query: 63  VMLGH-EKFGGET--HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
           +       F  +     +     + ++   +      +   ++  L K   K+  L   +
Sbjct: 80  IERALLAGFKPKNNNIVFTSDIIENKVLKKVIKYKIPVNAGSIDMLKKIGKKS--LKHPV 137

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK----CKDKIESEIKNVNGLMFHNNCENKSFLC 174
            +RINP       I  +     S+ G          I+    N+ GL  H     K+   
Sbjct: 138 WIRINPKFGDGHHIKTNTGGENSKHGIWNPKKALSVIKKYKLNLIGLHIHIGSGIKT-KN 196

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK---------- 224
              +   ++K      T+I++IS GGGI    K    +   +      +K          
Sbjct: 197 LHKVCNAMKKYAIKLKTKIKFISAGGGISIPYKSKEKEINIKDYFSQWDKTKKKISSILN 256

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
            S+Q+ +EPG  +   +  L   V  I        V+++S     +   L          
Sbjct: 257 CSIQLEIEPGRFLTAQSGILIAKVYAIKKMGKNIFVLINSGFNDLIRPILYGSYHKITVF 316

Query: 284 NTGPYT-------AMVCGRSCLAGDIFGE-------FHFEKPVKIGDRISFEDVAGYNIN 329
           +             +     C +GD+F               VK+GD I   D   Y  +
Sbjct: 317 HKKKSKKKRKKIKTIFAEPLCESGDVFTIKKNEIIFHRKIPQVKLGDYIIIHDTGAYGSS 376

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             + +N        +   +  ++  R  +  +  +
Sbjct: 377 MSSNYNSRPFIPEILYKKNNFVQIRRRQTIKEMLS 411


>gi|37787285|gb|AAO92750.1| ornithine decarboxylase [Paralichthys olivaceus]
          Length = 460

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 60/367 (16%), Positives = 114/367 (31%), Gaps = 34/367 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       ++R    +    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 40  FYVCDLGDVLK--KHLRWMRALPRITPFYAVKCNDSRAVVTTLASLGTGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       Y    K        S     +    S++   K      + K+ LRI  
Sbjct: 98  VQSLGVDPSRIIYANPCKQVSQIKYASAHGVQMMTFDSEVELMKVARCHDNAKLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++ +    NV G+ FH          +   + +   
Sbjct: 158 DDSKAVCRLSVKFGAPLKACRGLLERAKELGLNVIGVSFHVGSGCTDSKTYMQAIADARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIYLEPGE 235
            F         ++ + +GGG   +D                  K FS    V+I  EPG 
Sbjct: 218 VFHMGDELGFNMDLLDIGGGFPGSDNVELKFEEITAVINSALDKYFSADSGVKIIAEPGR 277

Query: 236 AIVTNTTT-----LNTTVLDISENIKNLVIVDSSVEAHVPDYL-----------LYQESA 279
             V +  T     +   V+   +++ +     ++    +                     
Sbjct: 278 FYVASAYTLVVNIIAKKVIMDEDSVSDDEDEGTNDRTLMYYVNDGVYGSFNCILYDHAHC 337

Query: 280 TIYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
               +  P      Y   + G +C   D   E  +   +++GD + FE++  Y +   + 
Sbjct: 338 MPILHKKPKPDEIMYPCSIWGPTCDGLDRIVEQCYLPDMQVGDWLVFENMGAYTVAASST 397

Query: 334 FNGINMP 340
           FNG   P
Sbjct: 398 FNGFQRP 404


>gi|156543044|ref|XP_001604390.1| PREDICTED: similar to ornithine decarboxylase [Nasonia vitripennis]
          Length = 400

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 56/360 (15%), Positives = 110/360 (30%), Gaps = 28/360 (7%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y++D   ++          K   V    A+KC  +  + + L     G   +S  E+  
Sbjct: 36  FYVLDVGDIVQKHQIWKE--KLPRVDPFYAVKCNDSLTVLEVLASLGVGFDCASKNEINK 93

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
             +         +    K             D +  +  S+L+K K         + +R 
Sbjct: 94  VLDIGVDSSRIIFANPAKPASHIRHAAAVGVDLMTVDNESELHKIKKLFPTAKVVLRIRC 153

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           +  V+  +  +     P        +        +V G+ FH     +    F+  + + 
Sbjct: 154 DSEVAQCQLGMKFGCDPTFEAPSLLR-LARLLDIDVVGISFHVGSGCQDPPVFNRAICHA 212

Query: 183 EKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV----QIYLEPGE 235
           +  F        +   + LGGG         ++     +    ++Y       I  EPG 
Sbjct: 213 KNLFDLAVDIGFKPYLLDLGGGYPGNKGS-SIEKIADVINHALDEYFPTDDVHIIAEPGR 271

Query: 236 AIVTNTTTLNTTVLD--------------ISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
             V +  TL T +                          V  S    + D+         
Sbjct: 272 FYVASAFTLATAIHSKRSVRADGNSPGNVTHTMYYINDGVYGSFNCLLYDHQHVTPIPLR 331

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
             +     + + G +C   D   E      +++GD I FE++  Y +   + FNG  +P 
Sbjct: 332 PGHGKMIPSSIWGPTCDGLDQVVENVLMHEMELGDWIIFENMGAYTLPVASPFNGFPIPK 391


>gi|294101351|ref|YP_003553209.1| Orn/DAP/Arg decarboxylase 2 [Aminobacterium colombiense DSM 12261]
 gi|293616331|gb|ADE56485.1| Orn/DAP/Arg decarboxylase 2 [Aminobacterium colombiense DSM 12261]
          Length = 395

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 58/367 (15%), Positives = 115/367 (31%), Gaps = 30/367 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP  +ID   +    D+          K+  A+K      +   L +       +S+YE
Sbjct: 31  ETPCLIIDLDVIEKQYDSLKK--GMPFAKIYYAVKANPLDDVVKLLVEKGSCFDIASVYE 88

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +          +  +Y    K  +  A            ++ S L K    A        
Sbjct: 89  LNQVLALGATPDRISYGNTIKKAKDIAYAYEKGVRLFATDSESDLYKLAKHAPGSKVFFR 148

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177
           +  + S +           P +      K  + S+   +   G+ FH   + +    +  
Sbjct: 149 ILTDGSGADWPLSRKFGAHPDTLY----KLILMSKELGLEPYGVSFHVGSQQRDLGQWDH 204

Query: 178 MLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQ 228
            +   +  F        +++ I+LGGG         V          + LKE   +   +
Sbjct: 205 AISTCKYLFDSVAEKGIRLKMINLGGGFPSQYIYPTVGAEVYGTEITRYLKEDFGENLPE 264

Query: 229 IYLEPGEAIVTNTTTLNTTVLDISE-----NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
           I LEPG  +  +   + T V+ IS        + + +        +       +      
Sbjct: 265 IILEPGRYMAGDAGVMVTEVVLISRKSEFGQYRWIYLDAGKFGGLIETLDESIKYPIYVE 324

Query: 284 NTG-PYTAMVCGRSCLAGDIF---GEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338
             G    A++ G +C + DI     ++     ++ GDR+       Y  +  +  FNG  
Sbjct: 325 KKGIVQEAIIAGPTCDSMDILYEQYKYELPLTLEEGDRVYILTTGAYTQSYSSVYFNGFP 384

Query: 339 MPTIAVK 345
                + 
Sbjct: 385 PLAAYIL 391


>gi|148237898|ref|NP_001080167.1| ornithine decarboxylase 1 [Xenopus laevis]
 gi|27694591|gb|AAH44004.1| Odc1-prov protein [Xenopus laevis]
          Length = 460

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 60/378 (15%), Positives = 118/378 (31%), Gaps = 42/378 (11%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   ++       + +    V    A+KC     +  TL+    G   +S  E+ L
Sbjct: 40  FYVADLGDIVK--KHVRWFKALPRVTPFYAVKCNDGKAIVKTLSILGAGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        ++C        S++   K      + K+ LRI  
Sbjct: 98  VQSIGVSPERIIYANPCKQVSQIKYAASCGVEKMTFDSEVELMKVARNHPNAKLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++ +    ++ G+ FH          +   + +   
Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELNVDIIGVSFHVGSGCTDPQTYVQAVSDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     V+I  EPG 
Sbjct: 218 VFDMGAELGFNMHLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPADSGVKIIAEPGR 277

Query: 236 AIVTNTTTLNTTVL--------------------------DISENIKNLVIVDSSVEAHV 269
             V ++ TL   ++                           +++ +           AHV
Sbjct: 278 YYVASSFTLAVNIIAKKVMVNEQSGSDDEEDAANDKTLMYYVNDGVYGSFNCILFDHAHV 337

Query: 270 PDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
              L  +           Y++ + G +C   D   E      +++GD + FE++  Y + 
Sbjct: 338 KPVLTKKPKPD----EKFYSSSIWGPTCDGLDRIVERFELPELQVGDWMLFENMGAYTVA 393

Query: 330 RKNWFNGINMPTIAVKNV 347
             + FNG   PT+     
Sbjct: 394 AASTFNGFQRPTLYYVMS 411


>gi|12007488|gb|AAG45222.1|AF323910_1 ornithine decarboxylase [Nicotiana glutinosa]
          Length = 432

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 52/362 (14%), Positives = 112/362 (30%), Gaps = 26/362 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y++D  ++++ +D          ++   A+KC         L+        +S  E+ 
Sbjct: 65  PFYVLDLGEVVSLMDQWKSSL--PNIRPFYAVKCNPEPSFLSILSAMGSNFDCASRAEIE 122

Query: 65  LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                    +   +    K       A     +   +++  ++ K +    K      ++
Sbjct: 123 YVLALGISPDRIVFANPCKPESDIIFAAKVGVNLTTYDSEDEVYKIRKHHPKSELLPRIK 182

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE----NKSFLCFSA 177
                +    +            E      ++    V+G+ FH        N      +A
Sbjct: 183 PMFDGNARCPMGPKY-GALPEEVEPLLRAAQAARLTVSGVSFHIGSGDADSNAYLGAIAA 241

Query: 178 MLKNIEKEFGHFITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
             +  E      ++++  + +GGG           V       + F ++  + I  EPG 
Sbjct: 242 AKEVFETAAKLGMSKMTVLDVGGGFTSGHQFTTAAVAVKSALKQHFDDEPELTIIAEPGR 301

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESA---------TI 281
                  TL TTV+      +            S+   + D+     +            
Sbjct: 302 FFAETAFTLATTVIGKRVRGELREYWINDGLYGSMNCVLYDHATVNATPLAVLSNRTNVT 361

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
              +  +   V G +C A D     +    +++ D + F ++  Y     + FNG N  T
Sbjct: 362 CGGSKTFPTTVFGPTCDALDTVLRDYQLPELQVNDWLVFPNMGAYTKAAGSNFNGFNTST 421

Query: 342 IA 343
           I 
Sbjct: 422 IV 423


>gi|327189543|gb|EGE56696.1| putative ornithine decarboxylase protein [Rhizobium etli CNPAF512]
          Length = 377

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 47/359 (13%), Positives = 106/359 (29%), Gaps = 33/359 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   + +N     +   ++   +  A+K   A  +   L         +S+ E+ 
Sbjct: 18  PCLVVDLDVVRDNFHAFRHAMPDSA--IYYAVKANPAPEVLKLLAGLGSNFDCASVAEIE 75

Query: 65  LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +  E        ++      +     A          ++  ++ K    A        + 
Sbjct: 76  MALEAGATAARISFGNTIKKERDVARAHALGVSLFAVDSHEEVEKISRAAPGARVFCRVL 135

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179
            +   +           P   +       + +    +   G+ FH   +      + + L
Sbjct: 136 TDGEGAEWPLSRKFGCVPQMAVDV----LVYAHQLGLQSYGVSFHVGSQMTKVDAWDSAL 191

Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIY 230
            + ++ F         ++ +++GGG                    Q L+        Q  
Sbjct: 192 ADAKRVFVSLAKQGIHLQMVNMGGGFPTKYLRDVPSAEAYGKSIYQALRMHFGNQIPQTI 251

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282
           +EPG  +V N   +   V+ IS+   N               +   + + + Y       
Sbjct: 252 IEPGRGMVGNAGVIKAEVVLISKKSDNDDARWVFLDIGKFGGLAETMDEAIRYPIRTEHD 311

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRKNW-FNGI 337
            +      ++ G +C + D+  E +       + IGD +  E    Y        FNG 
Sbjct: 312 GDEM-EPCVIAGPTCDSADVLYEKNLYPLPISLSIGDEVLIEGTGAYTTTYSAVAFNGF 369


>gi|7230377|gb|AAF42973.1|AF127242_1 ornithine decarboxylase [Nicotiana tabacum]
 gi|13171237|gb|AAK13622.1|AF233849_1 ornithine decarboxylase [Nicotiana tabacum]
 gi|1754522|dbj|BAA14049.1| ornithine decarboxylase [Nicotiana tabacum]
          Length = 433

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 49/362 (13%), Positives = 112/362 (30%), Gaps = 26/362 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y++D  ++++ +D          ++   A+KC         L+        +S  E+ 
Sbjct: 66  PFYVLDLGEVVSLMDQWKSAL--PNIRPFYAVKCNPEPSFLSILSAMGSNFDCASRAEIE 123

Query: 65  LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                    +   +    K       A     +   +++  ++ K +    K    + ++
Sbjct: 124 YVLSLGISPDRIVFANPCKPESDIIFAAKVGVNLTTYDSEDEVYKIRKHHPKSELLLRIK 183

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE----NKSFLCFSA 177
                +    +            +      ++    V+G+ FH        N      +A
Sbjct: 184 PMLDGNARCPMGPKY-GALPEEVDPLLRAAQAARLTVSGVSFHIGSGDADSNAYLGAIAA 242

Query: 178 MLKNIEKEFGHFITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
             +  E      ++++  + +GGG           V       + F ++  + I  EPG 
Sbjct: 243 AKEVFETAAKLGMSKMTVLDVGGGFTSGHQFTTAAVAVKSALKQHFDDEPELTIIAEPGR 302

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESA---------TI 281
                  TL TT++      +            S+   + D+     +            
Sbjct: 303 FFAETAFTLATTIIGKRVRGELREYWINDGLYGSMNCVLYDHATVNATPLAVLSNRSNVT 362

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
              +  +   V G +C A D     +    +++ D + F ++  Y     + FNG N   
Sbjct: 363 CGGSKTFPTTVFGPTCDALDTVLRDYQLPELQVNDWLVFPNMGAYTKAAGSNFNGFNTSA 422

Query: 342 IA 343
           I 
Sbjct: 423 IV 424


>gi|205806|gb|AAA66286.1| ornithine decarboxylase [Rattus norvegicus]
          Length = 461

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 62/382 (16%), Positives = 118/382 (30%), Gaps = 33/382 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       +++    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 40  FYVADLGDVLK--KHLRWLKALPRVTPFYAVKCNDSRAIVSTLAAIGTGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        ++    +    S++   K        K+ LRI  
Sbjct: 98  VQGLGVPPERIIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKAKLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++ +    +V G+ FH          F   + +   
Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQAVSDARC 217

Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     V+I  EPG 
Sbjct: 218 VFDMGTEVGFSMYLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPSDSGVRIIAEPGR 277

Query: 236 AIVTNTTTLNTTVLDISE-------------------NIKNLVIVDSSVEAHVPDYLLYQ 276
             V +  TL   ++                              V  S    + D+   +
Sbjct: 278 YYVASAFTLAVNIIAKKTVWKEQTGSDDEDESNEQTLMYYVNDGVYGSFNCILYDHAHVK 337

Query: 277 E--SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                   P+   Y++ + G +C   D   E      + +GD + FE++  Y +   + F
Sbjct: 338 ALLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCSLPEMHVGDWMLFENMGAYTVAAASTF 397

Query: 335 NGINMPTIAVKNVDGTIKAIRE 356
           NG   P I         + +++
Sbjct: 398 NGFQRPNIYYVMSRSMWQLMKQ 419


>gi|315040125|ref|XP_003169440.1| ornithine decarboxylase [Arthroderma gypseum CBS 118893]
 gi|311346130|gb|EFR05333.1| ornithine decarboxylase [Arthroderma gypseum CBS 118893]
          Length = 460

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 55/389 (14%), Positives = 112/389 (28%), Gaps = 42/389 (10%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y+ D  ++               VK   A+KC     +   +    +G   +S  E+ 
Sbjct: 73  PFYVADLGEIYRQHIRWKTNLPR--VKPFYAVKCNPNPQVLRLMAVLGNGFDCASKAEID 130

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           L            Y    K        S          +    +K K      ++ LRI 
Sbjct: 131 LALAAGVDPSRIIYAHPCKTKSYLRYASQIGVKQMTFDNTDELYKIKDMCPDAELYLRIL 190

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S S   L+              +   +   NV G+ FH     +    F   +++  
Sbjct: 191 TDDSASLCRLSMKFGASLSSARPLLELAHTLGLNVVGVSFHVGSGAEDPKSFIKAVQDAR 250

Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
             F         ++ + +GGG      +       + L  +   + +++  EPG   V  
Sbjct: 251 FVFDRAAEIGFDLKVLDVGGGFSDDTFEPFAAALGEALDTYFPPH-IRVIAEPGRYYVAT 309

Query: 241 TTTLNTTVLDISE-------------------------NIKNLVIVDSSVEAHVPDYLLY 275
             TL   V+   +                         +   ++ ++  V  +  + +  
Sbjct: 310 AFTLAANVIARRDVGAEEPLSDSESDSASPSRASTPTSSGAYMIYLNDGVYGNFSNIVFD 369

Query: 276 QESA-------TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYN 327
            +              + P    + G +C   D+  +       + +G+ + FE++  Y 
Sbjct: 370 HQHPVAQILTKDDDYTSAPIEYSIWGPTCDGIDVISKRITLNGLLGVGNWLYFENMGAYT 429

Query: 328 INRKNWFNGI--NMPTIAVKNVDGTIKAI 354
                 FNG       I +    G    +
Sbjct: 430 QCSATRFNGFTDKHEVIYIVTEPGAAALL 458


>gi|291412331|ref|XP_002722435.1| PREDICTED: ornithine decarboxylase 1-like [Oryctolagus cuniculus]
          Length = 461

 Score =  160 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 65/374 (17%), Positives = 114/374 (30%), Gaps = 33/374 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       +++    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 40  FYVADLGDVLK--KHLRWLKALPRVTPFYAVKCNDSRAIIKTLATIGTGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        ++    +    S++   K        ++ LRI  
Sbjct: 98  VQGLGVPPERIIYANPCKQVSQIKYAASSGVQMMTFDSEVELMKVARAHPKARLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++ +    +V G+ FH          F   L +   
Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQALSDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     V+I  EPG 
Sbjct: 218 VFDMGAEVGFHMHLLDIGGGFPGSEDAKLKFEEITSVINPALDKYFPSDSGVRIIAEPGR 277

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY---------------QESAT 280
             V +  TL   ++     +K     D   EA    ++ Y                    
Sbjct: 278 YYVASAFTLAVNIIAKKLVLKEQTGSDDEDEASERTFMYYVNDGVYGSFNCILYDHAHVK 337

Query: 281 IYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                 P      Y A + G +C   D          + +GD + FE++  Y +   + F
Sbjct: 338 PLLQKRPKPDEQYYPASIWGPTCDGLDRIVARCDLPEMHVGDWMLFENMGAYTVAAASTF 397

Query: 335 NGINMPTIAVKNVD 348
           NG   PTI      
Sbjct: 398 NGFQRPTIHYVMSG 411


>gi|134100867|ref|YP_001106528.1| ornithine decarboxylase [Saccharopolyspora erythraea NRRL 2338]
 gi|291003519|ref|ZP_06561492.1| ornithine decarboxylase [Saccharopolyspora erythraea NRRL 2338]
 gi|133913490|emb|CAM03603.1| ornithine decarboxylase [Saccharopolyspora erythraea NRRL 2338]
          Length = 407

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 53/364 (14%), Positives = 110/364 (30%), Gaps = 24/364 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP  ++D   + +       +       +  A+K   A  +   L         +S  E
Sbjct: 32  PTPCLVVDLPTIAHRYRRLRGLFPR--AVVHYAVKANPAPEVVSLLAGLGASFDVASPAE 89

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
             L        +  +Y    K     A +      +F   S+ +     A+     +  R
Sbjct: 90  AELCLRAGAAPDRLSYGNTVKKASDVARVHGLGVRMFTVDSEPDLVNVSAEAPGADVLCR 149

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA---M 178
           +      +             L E    +         G+ FH   +      +      
Sbjct: 150 VFAEPPGASTPFGRKFGCEPELAESLLRRAGRLGLRPRGVSFHVGTQQLDPRAWEHGIAT 209

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKD--YPVKDFCQRLKEFSEKYS----VQIYLE 232
              +         ++  + LGGG     +D   P  ++   ++E+ ++Y      ++ LE
Sbjct: 210 AARLMDRLADSGVRLTTLDLGGGFPAAYRDGAPPPSEYAAAIEEYLDRYFGAARPEVVLE 269

Query: 233 PGEAIVTNTTTLNTTVLDIS---ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-- 287
           PG A+V +   L + V+ +S      ++  +       +       +             
Sbjct: 270 PGRAVVADAGVLRSEVVLVSRKAYEHRHRWVYLDVGRHNGLTETEDEFITYALATPHDGG 329

Query: 288 --YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGI-NMP 340
                ++ G +C   D+  E   +H    +  GD +       Y  +     FNG   +P
Sbjct: 330 PTGPVVLAGPTCDGDDVLYERNTYHLPLDLHAGDHVDVLAAGAYTASCATVGFNGFPPLP 389

Query: 341 TIAV 344
           TI +
Sbjct: 390 TIHL 393


>gi|78484619|ref|YP_390544.1| ornithine decarboxylase [Thiomicrospira crunogena XCL-2]
 gi|78362905|gb|ABB40870.1| ornithine decarboxylase [Thiomicrospira crunogena XCL-2]
          Length = 398

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 58/358 (16%), Positives = 119/358 (33%), Gaps = 15/358 (4%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+ ++D Q++              GV+L  A+K  A   +   L +       ++  E
Sbjct: 35  ETPFLVLDLQEVEYQYSALQKAL--PGVELFYAIKSLAHPAVIRRLKKLGGSFDLATSGE 92

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           V L       G    +    K         +     F   +     K    K   ++ +R
Sbjct: 93  VDLVKGLGIEGHQCIHTHPIKKDREIRHALDFGCTRFVVDNPDEVLKFIPYKDEVELMIR 152

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           ++     +   L+              +        V+GL FH   ++ S       ++ 
Sbjct: 153 VSFRSQDAIVDLSRKFGSALEELPGLVNLAMENGLTVSGLSFHVGSQSLSPFAQVNAVQA 212

Query: 182 IEKEFGHFIT-QIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYS--VQIYLEPGEA 236
                        +W+ +GG    +      P++DFC  + E   +    V+++ EPG  
Sbjct: 213 SISAMKEMSHVHWKWLDIGGSFPVSYQGPVMPIEDFCAPIMEALTELPASVKVFAEPGRF 272

Query: 237 IVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESA--TIYPNTGPYT 289
           I   +      V+  ++               ++   + D+  Y  +    + P    Y 
Sbjct: 273 ISAPSMIEVIRVVGKAKRGARTWYYLDDGVYGALSGQMYDHAKYPIAPLKPVDPTGDFYP 332

Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
           +++ G +C + D+  E      + +GD +  + +  Y I   + FN    P I V   
Sbjct: 333 SVLAGPTCDSVDVVDEDIELPELAVGDILIAKQMGAYTIASASEFNYYPKPKIVVVED 390


>gi|332020376|gb|EGI60797.1| Ornithine decarboxylase 2 [Acromyrmex echinatior]
          Length = 427

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 53/357 (14%), Positives = 114/357 (31%), Gaps = 23/357 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y++D   ++N     +   K   V    A+KC     +   L     G   +S  E+  
Sbjct: 35  FYIVDIGDIINKHREWIT--KIPRVTPHYAVKCNPDPNVIKILAALNAGFDCASEQEIRQ 92

Query: 66  GHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
             +     +   +   YK       A   N + I  ++  +L K KD   +    I +R 
Sbjct: 93  VMQYGVQADRIIFANPYKCPSHIKYAKKMNIEQITADSELELLKIKDLYSEAKIVIRIRC 152

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA----M 178
           +   S     L     P      +      +    ++G  FH          +S      
Sbjct: 153 DAKNSECNLGLKFGCEPDED-AVRLIQLTANLGLTLHGFSFHVGSPCGELNAYSRGIGIC 211

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS--VQIYLEPGEA 236
            + I          ++ I +GGG         +      + +  +     +++  EPG  
Sbjct: 212 KRLIAIAKSMGCQDVQLIDIGGGF-LGQSGTDIDKLANIINDAIQDLDSSIRVISEPGRY 270

Query: 237 IVTNTTT-----LNTTVLDISENIKNLVIVDSSV-----EAHVPDYLLYQESATIYPNTG 286
            V +  T      +  ++  +     +   +        +  +              +  
Sbjct: 271 YVESAFTLASFLHSKKIVHKNGKFMRMYYANIGTYNSFLDELICPNTKVLRILFEPASDE 330

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343
            + + + G +C + D+  +      + IGD + +E+V  Y++     FNG  +P + 
Sbjct: 331 KFLSTLWGPTCDSFDVIAKDVLLPELHIGDWLVWENVGAYSLCLSTTFNGFPIPKVI 387


>gi|42526619|ref|NP_971717.1| pyridoxal-dependent family decarboxylase [Treponema denticola ATCC
           35405]
 gi|41816812|gb|AAS11598.1| decarboxylase, pyridoxal-dependent family [Treponema denticola ATCC
           35405]
 gi|325473161|gb|EGC76357.1| pyridoxal-dependent family Decarboxylase [Treponema denticola
           F0402]
          Length = 389

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 54/371 (14%), Positives = 118/371 (31%), Gaps = 29/371 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TP  +I+ + +  N          A   +  A+K      +   LN+       +S Y
Sbjct: 22  LETPCVVINLKTIKKNYQKLRENFPYAD--IFYAIKANPHEEIISMLNEMGSCFDIASRY 79

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+    +     E  +Y    K  +  A            ++   L      A      +
Sbjct: 80  ELDKVLKLGVSPERLSYGNTIKKAKDIAYFYEKGVRMFATDSKDDLKNIAQFAPGSRVYV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
            + +  + S    +            + C    +S +    G+ FH   + +    ++  
Sbjct: 140 RILVENTTSADWPLSRKFGCHPDMAYDLCIQARDSGLI-PYGISFHVGSQQRDIGQWNDA 198

Query: 179 LKNIEKEFG----HFITQIEWISLGGGIHFTDKD------YPVKDFCQRLKEFSEKYSVQ 228
           +   +            ++E +++GGG   +             +  + L++   +   +
Sbjct: 199 IAKTKYLMDSLEEEEEIKLEMVNMGGGFPASYVTPANDLSEYASEISRYLEDDFGEERPR 258

Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATIYP 283
           I LEPG ++V ++  L T V+ IS          + +        +       +   I  
Sbjct: 259 IILEPGRSLVGDSGILVTEVVMISRKNNTALFRWVYLDTGLFNGLIETLNESLKYPIITD 318

Query: 284 ----NTGPYTAMVCGRSCLAGDIF---GEFHFEKPVKIGDRISFEDVAGYNINRKN-WFN 335
                      ++ G +C + DI     ++     +K GDR+ F     Y  +  +  FN
Sbjct: 319 KDEGCKKWGEVVLAGPTCDSMDIMYEDYKYSLPTNLKPGDRVYFLTTGAYTSSYASVEFN 378

Query: 336 GINMPTIAVKN 346
           G       +  
Sbjct: 379 GFPPIKTYIMK 389


>gi|332715985|ref|YP_004443451.1| ornithine decarboxylase [Agrobacterium sp. H13-3]
 gi|325062670|gb|ADY66360.1| ornithine decarboxylase [Agrobacterium sp. H13-3]
          Length = 377

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 48/367 (13%), Positives = 111/367 (30%), Gaps = 38/367 (10%)

Query: 2   IKT-----PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTT 56
           IKT     P  ++D   + +N +   +        +  A+K   A  +   L        
Sbjct: 10  IKTRRPEGPCLVVDLDVVRDNFNAFRHSL--PNSAIYYAVKANPAPEILKLLASLGSNFD 67

Query: 57  SSSLYEVMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
            +S+ E+ +        +  ++      +     A     D    ++  ++ K    A  
Sbjct: 68  CASVAEIQMALDAGATSDRISFGNTIKKERDVARAYALGIDLFAVDSHEEVEKVARAAPG 127

Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKS 171
                 +  +   +           P   +       + +    +   G+ FH   +  +
Sbjct: 128 ARVFCRVLTDGEGAEWPLSRKFGCVPQMAVDV----LVYAHQLGLESYGVSFHVGSQMMN 183

Query: 172 FLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFS 222
              + A L + ++ F         ++ +++GGG            +   +     L++  
Sbjct: 184 LDAWDAALGDAKRVFASLSKQGIHLQMVNMGGGFPTKYLRGVPAAEEYGQAIDTALRKHF 243

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLL 274
                +  +EPG  +V N   +   V+ +S    N               +   + + + 
Sbjct: 244 GNQIPKTIIEPGRGMVGNAGVIKAEVVLVSRKSDNDNHRWVFLDIGKFGGLAETMDEAIR 303

Query: 275 YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRK 331
           Y        +      ++ G +C + D+  E +       + IGD +  E    Y     
Sbjct: 304 YPIRTERDQDEM-EPCVLAGPTCDSADVLYEKNMYPLPVSLTIGDEVLIEGAGAYTTTYS 362

Query: 332 NW-FNGI 337
              FNG 
Sbjct: 363 AVAFNGF 369


>gi|296818705|ref|XP_002849689.1| ornithine decarboxylase [Arthroderma otae CBS 113480]
 gi|238840142|gb|EEQ29804.1| ornithine decarboxylase [Arthroderma otae CBS 113480]
          Length = 457

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 56/370 (15%), Positives = 105/370 (28%), Gaps = 40/370 (10%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y+ D  ++               VK   A+KC     +   +    +G   +S  E+ 
Sbjct: 70  PFYVADLGEIYRQHIRWKTNLPR--VKPFYAVKCNPNPMVLRLMAVLGNGFDCASKAEID 127

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           L            Y    K        S          +    +K K+     ++ LRI 
Sbjct: 128 LALAAGVDPTRIIYAHPCKTKSYLRYASQVGVKQMTFDNTDELYKIKSMCPDAELYLRIL 187

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S S   L+              +       NV G+ FH     +    F   +++  
Sbjct: 188 TDDSASLCRLSMKFGASLSSARPLLELAHELGLNVVGVSFHVGSGAEDPKSFIKAVQDAR 247

Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
             F         ++ + +GGG      +       + L  +   + +++  EPG   V  
Sbjct: 248 FVFDRAAEIGFDLKVLDVGGGFSDDTFEPFAAALGEALDTYFPPH-IRVIAEPGRYYVAT 306

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVP-----DYLLYQESATI-------------- 281
             TL   V+   +      + DS  ++  P               +              
Sbjct: 307 AFTLAANVIARRDVGSEEQLSDSESDSTSPTRAATPASNGMYMIYLNDGVYGNFSNIVFD 366

Query: 282 -------------YPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYN 327
                           + P    + G +C   D+  E       + +G+ + FE++  Y 
Sbjct: 367 HQHPVAQILTKDDAYTSAPIQYSIWGPTCDGIDVISESVTLNGLLGVGNWLYFENMGAYT 426

Query: 328 INRKNWFNGI 337
                 FNG 
Sbjct: 427 QCSATRFNGF 436


>gi|116253893|ref|YP_769731.1| lysine/ornithine decarboxylase [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115258541|emb|CAK09645.1| putative lysine/ornithine decarboxylase [Rhizobium leguminosarum
           bv. viciae 3841]
          Length = 377

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 49/359 (13%), Positives = 107/359 (29%), Gaps = 33/359 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   + +N D   +   ++   +  A+K   A  +   L         +S+ E+ 
Sbjct: 18  PCLVVDLDVVRDNFDAFRHAMPDSA--IYYAVKANPAPEVLKLLAGLGSNFDCASVAEIE 75

Query: 65  LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +  E        +Y      +     A          ++  ++ K    A        + 
Sbjct: 76  MALEAGATAARISYGNTIKKERDVARAHALGVSLFAVDSHEEVEKISRAAPGARVFCRVL 135

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179
            +   +           P   +       + +    +   G+ FH   +      + + L
Sbjct: 136 TDGEGAEWPLSRKFGCVPQMAVDV----LVYAHQLGLQSYGVSFHVGSQMTKVDAWDSAL 191

Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIY 230
            + ++ F         ++ +++GGG                    Q L+        Q  
Sbjct: 192 ADAKRVFVSLAKQGIHLQMVNMGGGFPTKYLRDVPSAEAYGKSIYQALRTHFGNQIPQTI 251

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282
           +EPG  +V N   +   V+ IS+   N               +   + + + Y       
Sbjct: 252 IEPGRGMVGNAGVIKAEVVLISKKSDNDDARWVFLDIGKFGGLAETMDEAIRYPIRTEHD 311

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRKNW-FNGI 337
            +      ++ G +C + D+  E +       + IGD +  E    Y        FNG 
Sbjct: 312 GDEM-EPCVIAGPTCDSADVLYEKNLYPLPISLSIGDEVLIEGTGAYTTTYSAVAFNGF 369


>gi|15966628|ref|NP_386981.1| putative ornithine, DAP, or arginine decarboxylase protein
           [Sinorhizobium meliloti 1021]
 gi|307300337|ref|ZP_07580117.1| Orn/DAP/Arg decarboxylase 2 [Sinorhizobium meliloti BL225C]
 gi|307319620|ref|ZP_07599046.1| Orn/DAP/Arg decarboxylase 2 [Sinorhizobium meliloti AK83]
 gi|15075900|emb|CAC47454.1| Putative ornithine, DAP, or arginine decarboxylase [Sinorhizobium
           meliloti 1021]
 gi|306894742|gb|EFN25502.1| Orn/DAP/Arg decarboxylase 2 [Sinorhizobium meliloti AK83]
 gi|306904503|gb|EFN35087.1| Orn/DAP/Arg decarboxylase 2 [Sinorhizobium meliloti BL225C]
          Length = 379

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 47/359 (13%), Positives = 106/359 (29%), Gaps = 33/359 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   + +N     +   ++   +  A+K   A  +   L         +S+ E+ 
Sbjct: 20  PCLVVDLDVVRDNFKAFRHALPDSA--IYYAVKANPAPEILRLLAGLGSNFDCASVAEIE 77

Query: 65  LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +           +Y      +     A          ++  ++ K    A        + 
Sbjct: 78  MALDAGATPNRISYGNTIKKERDVARAHALGISLFAVDSHEEVEKIARAAPGARVFCRVL 137

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179
            +   +           P   +       + +    +   G+ FH   +      + A L
Sbjct: 138 TDGEGAEWPLSRKFGCVPQMAVDV----LVYAHQLGLVSYGVSFHVGSQMTKLDAWDAAL 193

Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIY 230
            + ++ F        +++ +++GGG                      LK+       +  
Sbjct: 194 ADAKRVFVQLAKQGIELKMVNMGGGFPTKYLRDVPSAEAYGQAIFGALKKHFGNNIPETI 253

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282
           +EPG  +V N   +   V+ +S+   N               +   + + + Y    T  
Sbjct: 254 IEPGRGMVGNAGVIKAEVVLVSKKSDNDSHRWVFLDIGKFGGLAETMDEAIRYPIR-TAR 312

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRKNW-FNGI 337
                   ++ G +C + D+  E +       + IGD +  E    Y        FNG 
Sbjct: 313 DADAMEPCVLAGPTCDSADVLYEKNMYPLPISLTIGDEVLIEGTGAYTTTYSAVAFNGF 371


>gi|308205619|gb|ADO19084.1| diaminopimelate decarboxylase [Nostoc flagelliforme str.
           Sunitezuoqi]
          Length = 458

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 49/404 (12%), Positives = 121/404 (29%), Gaps = 43/404 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+ +  +L   ++           +   A        +      +  G  +++  +
Sbjct: 45  GSPLYVYNGDRLGETIERITKAVSYPRTQFRFASVTNGNIALLKIFRSFGWGLHANTPGD 104

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIG 119
           + LG    F      Y+ +  +      + N    T+ F++++QL     +     ++  
Sbjct: 105 IYLGLQAGFDASEIVYSGSNLNRSEMLEVLNWGVTTLNFDSLAQLQ-LCCEVLPKGREKN 163

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +R+   ++  +                           ++GL F+      +   F+ ++
Sbjct: 164 IRLGLRLNLPEITGDSRIGVRPEEFGDAIALTGEVGIKLSGLHFYRGTGTNATAAFTQVI 223

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSEK--YSVQIYLEP 233
             +       +   E++  GGG  +        +  + F   L +   +    + + +EP
Sbjct: 224 DTVIAT-AQQLPDWEYLDFGGGFGYPYHHNKTAFDWEIFGAELTKRITRLGRKIDLVIEP 282

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPNTGP----- 287
           G A +    TL   V+ +    +  ++   +  A++    +       I           
Sbjct: 283 GRAAIAGCATLLAQVVSVKWQGEKQIVGVDTTVANLSVPSVHGGYREIITWKQANKSSIP 342

Query: 288 --------------------------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321
                                     +   +CG +  + D  G+      ++IGD ++  
Sbjct: 343 HSPLLRLTSAKLGTSRSVQVPTPDSLFKTDICGNTTYSRDYLGKNCQLPALEIGDIVAIL 402

Query: 322 DVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           DV  Y     + F     P   +          R   Y+    N
Sbjct: 403 DVGAYGYAMSSHFLHRPKPAEVLLENCTHRLIRRREDYSVLLTN 446


>gi|114576085|ref|XP_001156939.1| PREDICTED: ornithine decarboxylase 1 isoform 3 [Pan troglodytes]
          Length = 476

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 65/407 (15%), Positives = 122/407 (29%), Gaps = 56/407 (13%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       +++    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 40  FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSKAIVKTLAAIGTGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                   E   Y    K        +N     + F++  +L K      K        I
Sbjct: 98  VQSLGVLPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKIYQRQYI 157

Query: 123 NPSVSYS-------KFILADPNRPFSRLGEKCK------DKIESEIKNVNGLMFHNNCEN 169
             +                   R   + G   +      ++ +    +V G+ FH     
Sbjct: 158 CCTFLACRLVLRIATDDSKAVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGC 217

Query: 170 KSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKE 220
                F   + +    F         +  + +GGG   ++      +           K 
Sbjct: 218 TDPETFVQAISDARCVFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKY 277

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVL-------------------------DISENI 255
           F     V+I  EPG   V +  TL   ++                          +++ +
Sbjct: 278 FPSDSGVRIIAEPGRYYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGV 337

Query: 256 KNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIG 315
                      AHV   L  +           Y++ + G +C   D   E      + +G
Sbjct: 338 YGSFNCILYDHAHVKPLLQKRPKPD----EKYYSSSIWGPTCDGLDRIVERCDLPEMHVG 393

Query: 316 DRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
           D + FE++  Y +   + FNG   PTI         + +++F   D+
Sbjct: 394 DWMLFENMGAYTVAAASTFNGFQRPTIYYVMSGPAWQLMQQFQNPDF 440


>gi|296270931|ref|YP_003653563.1| Orn/DAP/Arg decarboxylase 2 [Thermobispora bispora DSM 43833]
 gi|296093718|gb|ADG89670.1| Orn/DAP/Arg decarboxylase 2 [Thermobispora bispora DSM 43833]
          Length = 362

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 56/349 (16%), Positives = 102/349 (29%), Gaps = 19/349 (5%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y+ D   L  +           G ++  A+K      +   L  Y+DG   +S  E  
Sbjct: 16  PAYVYDLDGLRRHAAAVRDAM--TGTQIHYAVKANPDPKVLRALAPYVDGFEVASAGEFQ 73

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
              E   G   ++    K  +  A+          + ++L +    A  L +        
Sbjct: 74  RVTEVVPGMPVSFGGPGKTTDELALAPLVHRWHVESPAELRRLTGPADILLRVNLGVPVE 133

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             + +    A P         +C   + +    + G+  H      +          +E 
Sbjct: 134 GAALTMGGGATPFGMDPEGVAECLRLLPTSRARLRGVHAHLASGLDAPALLEIARAVLEY 193

Query: 185 EFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
                   +   +LGGG+          +    + + L+  +         EPG A+   
Sbjct: 194 G---RGLGVAEFNLGGGMAVDYRRPGNRFDWAAYGEGLRRLAAPGETLRI-EPGRALTAY 249

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPNTG------PYTAMVC 293
                TTV+D+         V S    H+        +      + G      P    + 
Sbjct: 250 CGWYLTTVIDVKRVHGERFAVLSGGTHHLRTPVTKGHDQPFTVIHRGAGGRPEPEPVTLV 309

Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGINMPT 341
           GR C   D+F        +  GD ++F     Y  N  +  F     P 
Sbjct: 310 GRLCTPKDVFARRV-PASLAPGDVVAFAMAGAYAWNISHHDFLMHPKPE 357


>gi|26541511|gb|AAN85498.1|AF484556_20 diaminopimelase decarboxylase [Streptomyces atroolivaceus]
          Length = 433

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 58/400 (14%), Positives = 123/400 (30%), Gaps = 39/400 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D+  +  +  T   +    G+ +  +LK      +    ++      +SS++E
Sbjct: 29  GTPVFVYDEATVRASSKTMSTLPNAFGLTVRYSLKACPGQAIIRLFDREGFSFDASSVWE 88

Query: 63  VMLG-HEKFGGETHAYN--VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
                         +     A  D  +  ++         ++ QL ++          + 
Sbjct: 89  ARRAVLAGVEPGRISMTAQEAVFDENLRDLIDQGLQFDAGSLHQLEEYGRAY--PGGAVA 146

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE----IKNVNGLMFHNNCENKSFLCF 175
           +RINP          +   P S  G   +   E +       +  +   ++  +      
Sbjct: 147 IRINPGFGSGLVGRLNSGGPQSSFGIWHEQLPEVKQIVEQYGLRLVRLQSHIGSGHHWDI 206

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIH----FTDKDYPVKDFCQRLKEFSEKYSV---- 227
                     F      +  + LGGG       +D  Y   ++ + + +  ++++     
Sbjct: 207 LVDAVRTMLSFARDFQDVHTLDLGGGYRVSALQSDPVYDHTEWARVVADELKQFAEETGR 266

Query: 228 --QIYLEPGEAIVTNTTTLNTTVL---DISENIKNLVIVDSSVEAHVPDYLLYQESATI- 281
                +EPG  +     +L T V+   D      + + ++S +           +   + 
Sbjct: 267 RLHTEVEPGTYLTALAGSLVTKVIDKADTGAEGNSFLKINSGLTEIARPSYYGVQHPIVS 326

Query: 282 --------YPNTGPYTAMVCGRSCLAGDIF-GEFHFEKPV-----KIGDRISFEDVAGYN 327
                             V G  C+AGD+   +     PV     +IGD +  E    Y 
Sbjct: 327 VPATGGAERAADDREEFNVVGHCCIAGDVLTAKQEELAPVPLGRTEIGDYVVIERAGSYC 386

Query: 328 INRKN-WFNGINMPTIAVKNVDGTIKAIR-EFSYNDYYNN 365
            +     FN        ++  DG+   IR   S      N
Sbjct: 387 SSMSMKNFNSYPEAAEVLRRTDGSFDLIRSRQSIEQVIVN 426


>gi|319899290|ref|YP_004159385.1| lysine/ornithine decarboxylase [Bartonella clarridgeiae 73]
 gi|319403256|emb|CBI76815.1| lysine/ornithine decarboxylase [Bartonella clarridgeiae 73]
          Length = 453

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 51/359 (14%), Positives = 111/359 (30%), Gaps = 33/359 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   +  N          +  ++  A+K   A  +   L        ++S+ E+ 
Sbjct: 94  PCLVVDLDVVHENYLNFKKALPQS--RIFYAIKANPAPEILRLLVSLGSSFDAASIAEIE 151

Query: 65  LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +        +  ++      +     A          + + ++ K    A        + 
Sbjct: 152 MALKAGATADRISFGNTIKKERDIARAHALGVSLYAVDCLEEVEKVACAAPGARVFCRVL 211

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179
            +   +           PF  +         +    +   G+ FH   +      +   L
Sbjct: 212 TDGEGAEWPLSQKFGCVPFMAVDV----LRHAHQLGLQAYGVSFHVGSQQTDLNAWDRAL 267

Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIY 230
            +    F        Q++ +++GGG                      LK++      +  
Sbjct: 268 SDTAFVFKSLEQEGIQLKLVNMGGGFPTRYLKDIPTVQTYGMAIFDSLKKYFGNRIPETI 327

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282
           +EPG A+V N   + T V+ IS+  K+  I          + +   + + + Y    T Y
Sbjct: 328 IEPGRAMVGNAGVIRTEVVLISKKAKDDNIRWVYLDVGKFNGLTETMDEAIRYP-IETAY 386

Query: 283 PNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337
            +      ++ G +C + D+  E   +     + IGD +       Y     +  FNG 
Sbjct: 387 DDKAMEPCILAGPTCDSADVMYEKTPYLLPLSLTIGDELLIHGTGAYTTTYASVAFNGF 445


>gi|134097855|ref|YP_001103516.1| Orn/DAP/Arg decarboxylase 2 [Saccharopolyspora erythraea NRRL 2338]
 gi|291005509|ref|ZP_06563482.1| Orn/DAP/Arg decarboxylase 2 [Saccharopolyspora erythraea NRRL 2338]
 gi|133910478|emb|CAM00591.1| Orn/DAP/Arg decarboxylase 2 [Saccharopolyspora erythraea NRRL 2338]
          Length = 402

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 53/369 (14%), Positives = 123/369 (33%), Gaps = 26/369 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP  ++D   +  N             ++  A+K   A  +  TL         +S  E
Sbjct: 36  ETPCLVVDLAAVRRNYQALRSAL--PDARICYAVKANPAPEVVATLAALGSSFDVASPGE 93

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           + L        E+ +Y    K     A        +F T S+ +           ++  R
Sbjct: 94  IDLCLAQGASPESISYGNTIKKPRDIARAHRLGVRLFVTDSEADLLNIAESAPGSQVFCR 153

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +      S+           +   +   +      +  G+ FH   +      +   ++ 
Sbjct: 154 VLVDNKGSRTPFGRKFGCTPQTAVRLLRRAAELGLDPYGVSFHIGSQQLDPSAWEHGIRA 213

Query: 182 IEKEF---GHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYS----VQIYLE 232
             + F            ++LGGG+  +      P+ D+ + ++   +++      ++ +E
Sbjct: 214 AREVFDGLAEHGVTPRMVNLGGGLPASYTESAPPLGDYAEHIERALDRHFGARRPELLIE 273

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIV-------DSSVEAHVPDYLLYQESATIYPNT 285
           PG  +V +   L T V+ ++ +  +            + +     + + Y+   +   + 
Sbjct: 274 PGRQVVGDAGVLRTEVVLVTASAGDDRRWVYLDVGRYNGLAETEGEAITYRLRTSRDGDE 333

Query: 286 GPYTAMVCGRSCLAGDIFG---EFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI-NMP 340
                ++ G +C   D+      +     ++ GDR+       Y  +  +  FNGI  +P
Sbjct: 334 CG-PVVLAGPTCDGDDVLYQHTRYDLPLTLRGGDRVDLLSAGAYTASYSSVCFNGIAPLP 392

Query: 341 TIAVKNVDG 349
           T    + D 
Sbjct: 393 TH-CIDGDE 400


>gi|296446216|ref|ZP_06888163.1| Orn/DAP/Arg decarboxylase 2 [Methylosinus trichosporium OB3b]
 gi|296256253|gb|EFH03333.1| Orn/DAP/Arg decarboxylase 2 [Methylosinus trichosporium OB3b]
          Length = 380

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 46/359 (12%), Positives = 105/359 (29%), Gaps = 31/359 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   + +N  +          ++  A+K   A  +   L +      ++S+ E+ 
Sbjct: 21  PCLVVDLDIVRDNYQSFARAL--PDTRVFYAVKANPAPEVLALLARLGSCFDTASVVEIE 78

Query: 65  LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                    +  ++      +     A          +  +++ K    A        + 
Sbjct: 79  QTLAAGATPDRISFGNTIKKERDIARAYALGVRLFAVDCEAEVEKIARAAPGARVFCRIL 138

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179
            +   +           P        +    +    +   G+ FH   + +    +   L
Sbjct: 139 CDGDGAEWPLSRKFGCAPQMA----PRVLEHAHRLGLTAYGVSFHVGSQQRDPGMWDGAL 194

Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIY 230
           K+  + F        Q++ ++LGGG                    + L +       +  
Sbjct: 195 KSAAEIFNDLAERGIQLQMVNLGGGFPTKYLKNVPVVKAYGQAIFRALSKHFGNRIPETI 254

Query: 231 LEPGEAIVTNTTTLNTTVLDI-----SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285
           +EPG  +V N   +   V+ +      + ++ + +                         
Sbjct: 255 IEPGRGMVGNAGVIEAEVVLVSRKSDDDPVRWVYLDIGKFNGLAETTDEMIRYPIRTEAD 314

Query: 286 GPYTAMVC--GRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338
           G  TA     G SC + D+  E   +     ++IG ++  E    Y     +  FNG  
Sbjct: 315 GDATAPCVLAGPSCDSIDVLYEKDPYLLPIGLEIGSKVLIEGTGAYTTTYSSVGFNGFP 373


>gi|241206375|ref|YP_002977471.1| Orn/DAP/Arg decarboxylase 2 [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240860265|gb|ACS57932.1| Orn/DAP/Arg decarboxylase 2 [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 377

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 48/359 (13%), Positives = 106/359 (29%), Gaps = 33/359 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   + +N     +   ++   +  A+K   A  +   L         +S+ E+ 
Sbjct: 18  PCLVVDLDVVRDNFHAFRHAMPDSA--IYYAVKANPAPEVLKLLAGLGSNFDCASVAEIE 75

Query: 65  LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +  E        +Y      +     A          ++  ++ K    A        + 
Sbjct: 76  MALEAGATAARISYGNTIKKERDVARAHALGVSLFAVDSHEEVEKISRAAPGARVFCRVL 135

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179
            +   +           P   +       + +    +   G+ FH   +      + + L
Sbjct: 136 TDGEGAEWPLSRKFGCVPQMAVDV----LVYAHQLGLQSYGVSFHVGSQMTKVDAWDSAL 191

Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIY 230
            + ++ F         ++ +++GGG                    Q L+        Q  
Sbjct: 192 ADAKRVFVSLAKQGIHLQMVNMGGGFPTKYLRDVPSAEAYGKSIYQALRTHFGNQIPQTI 251

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282
           +EPG  +V N   +   V+ IS+   N               +   + + + Y       
Sbjct: 252 IEPGRGMVGNAGVIKAEVVLISKKSDNDDARWVFLDIGKFGGLAETMDEAIRYPIRTEHD 311

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRKNW-FNGI 337
            +      ++ G +C + D+  E +       + IGD +  E    Y        FNG 
Sbjct: 312 GDEM-EPCVIAGPTCDSADVLYEKNLYPLPISLSIGDEVLIEGTGAYTTTYSAVAFNGF 369


>gi|121706982|ref|XP_001271694.1| ornithine decarboxylase [Aspergillus clavatus NRRL 1]
 gi|119399842|gb|EAW10268.1| ornithine decarboxylase [Aspergillus clavatus NRRL 1]
          Length = 441

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 56/360 (15%), Positives = 112/360 (31%), Gaps = 31/360 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D  ++        +    + VK   A+KC     +   + +  +G   +S  E+ L
Sbjct: 64  FYVADMGEIYR--QHLRWKMNLSRVKPFYAVKCNPDPEILRLMAKLGNGFDCASKSEIDL 121

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             E         Y    K        +          +    +K KA     ++ LRI  
Sbjct: 122 ALETGIDPSRIIYAQPCKTKSYLRYAAQVGVRQMTFDNADELYKIKACFPDAELYLRILT 181

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S S   L+        +  +  +        V G+ FH     +    F   +++   
Sbjct: 182 DDSTSLCRLSMKFGASLDIARQLLELAAELELKVVGVSFHVGSGAEDPRAFLKAVQDARL 241

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            F        ++  + +GGG      +       + L  +   + ++I  EPG   V + 
Sbjct: 242 VFDQAAEVGHELHTLDVGGGFSQDTFETFAGILGEALDTYFPPH-IRIIAEPGRYYVASA 300

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY------------- 288
            TL   V+   +        + +   ++ D +    S  I+ +  P              
Sbjct: 301 LTLAANVIARRDLRDPEDPANDAYMLYLNDGVYGNFSNIIFDHQHPVAKILTRSGGPQPI 360

Query: 289 ----------TAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGI 337
                        + G +C   D+  +       + +GD + FE++  Y       FNG 
Sbjct: 361 APNAATSEGIAYSIWGPTCDGIDVITQRIVLPGLLDVGDWLYFEEMGAYTKCSATRFNGF 420


>gi|33340513|gb|AAQ14852.1|AF321138_1 ornithine decarboxylase [Nicotiana tabacum]
          Length = 433

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 49/362 (13%), Positives = 112/362 (30%), Gaps = 26/362 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y++D  ++++ +D          ++   A+KC         L+        +S  E+ 
Sbjct: 66  PFYVLDLGEVVSLMDQWKSAL--PNIRPFYAVKCNPEPSFLSILSAMGSNFDCASRAEIE 123

Query: 65  LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                    +   +    K       A     +   +++  ++ K +    K    + ++
Sbjct: 124 YVLSLGISPDRIVFANPCKPESDIIFAAKVGVNLTTYDSEDEVYKIRKHHPKSELSVRIK 183

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE----NKSFLCFSA 177
                +    +            +      ++    V+G+ FH        N      +A
Sbjct: 184 PMLDGNARSAMGPKY-GALPEEVDPLLRAAQAARLTVSGVSFHIGSGDADSNAYLGAIAA 242

Query: 178 MLKNIEKEFGHFITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
             +  E      ++++  + +GGG           V       + F ++  + I  EPG 
Sbjct: 243 AKEVFETAAKLGMSKMTVLDVGGGFTSGHQFTTAAVAVKSALKQHFDDEPELTIIAEPGR 302

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESA---------TI 281
                  TL TT++      +            S+   + D+     +            
Sbjct: 303 FFAETAFTLATTIIGKRVRGELREYWINDGLYGSMNCVLYDHATVNATPLAVLSNRSNVT 362

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
              +  +   V G +C A D     +    +++ D + F ++  Y     + FNG N   
Sbjct: 363 CGGSKTFPTTVFGPTCDALDTVLRDYQLPELQVNDWLVFPNMGAYTKAAGSNFNGFNTSA 422

Query: 342 IA 343
           I 
Sbjct: 423 IV 424


>gi|194757515|ref|XP_001961010.1| GF13654 [Drosophila ananassae]
 gi|190622308|gb|EDV37832.1| GF13654 [Drosophila ananassae]
          Length = 396

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 53/358 (14%), Positives = 102/358 (28%), Gaps = 25/358 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
             + D   +         +     +    A+KC     +   L +   G   +S  E+ L
Sbjct: 33  LNICDLSSVERKYQLWKKLLPR--IMPCYAVKCNDDPVLVKLLAELGAGFDCASKNELKL 90

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   +    +                   ++   +K         + +R   
Sbjct: 91  VLGFDVSPERIIFANPCRPVSHLDYAKENRVANGTVDNEFEVYKLHKHYPESNLIVRFKS 150

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKI-ESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
               ++  L D     +         + +S    V G  FH          +   +K  +
Sbjct: 151 EAKEAQCPLGDKFGCDADADATALMLLAKSLDLTVTGTSFHVGSGCSELEAYDRAIKKAK 210

Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV----QIYLEPGEA 236
             F         ++++ +GGG   +D     +     +    EK+      QI  EPG  
Sbjct: 211 NIFKFGELLGYDMDFLDIGGGFPGSDD-EKFQKIADIVNTSVEKHFPDERVQIIAEPGRY 269

Query: 237 IVTNTTTLNTTVLDISE-----------NIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285
            V    TL   +    E                  V  S    + D+ +      +    
Sbjct: 270 FVAAAFTLICKIHARREIRNEAGKLDTVMYYLNDGVYGSFNCILYDHQVVTAQHYLDDAE 329

Query: 286 G--PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
               + +++ G SC A D   E      +  GD + F ++  Y +   + FNG  +P 
Sbjct: 330 NLPKFKSLIWGPSCDALDKISEDLRLPNLNRGDLLGFPNMGAYTMPIASPFNGFEIPK 387


>gi|190893472|ref|YP_001980014.1| ornithine decarboxylase [Rhizobium etli CIAT 652]
 gi|190698751|gb|ACE92836.1| probable ornithine decarboxylase protein [Rhizobium etli CIAT 652]
          Length = 377

 Score =  159 bits (402), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 47/359 (13%), Positives = 106/359 (29%), Gaps = 33/359 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   + +N     +   ++   +  A+K   A  +   L         +S+ E+ 
Sbjct: 18  PCLVVDLDVVRDNFHAFRHAMPDSA--IYYAVKANPAPEVLKLLAGLGSNFDCASVAEIE 75

Query: 65  LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +  E        ++      +     A          ++  ++ K    A        + 
Sbjct: 76  MALEAGATAARISFGNTIKKERDIARAHALGVSLFAVDSHEEVEKISRAAPGARVFCRVL 135

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179
            +   +           P   +       + +    +   G+ FH   +      + + L
Sbjct: 136 TDGEGAEWPLSRKFGCVPQMAVDV----LVYAHQLGLQSYGVSFHVGSQMTKVDAWDSAL 191

Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIY 230
            + ++ F         ++ +++GGG                    Q L+        Q  
Sbjct: 192 ADAKRVFVSLAKQGIHLQMVNMGGGFPTKYLRDVPSAEAYGKSIYQALRTHFGNQIPQTI 251

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282
           +EPG  +V N   +   V+ IS+   N               +   + + + Y       
Sbjct: 252 IEPGRGMVGNAGVIKAEVVLISKKSDNDDARWVFLDIGKFGGLAETMDEAIRYPIRTEHD 311

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRKNW-FNGI 337
            +      ++ G +C + D+  E +       + IGD +  E    Y        FNG 
Sbjct: 312 GDEM-EPCVIAGPTCDSADVLYEKNLYPLPISLSIGDEVLIEGTGAYTTTYSAVAFNGF 369


>gi|218961453|ref|YP_001741228.1| Ornithine decarboxylase [Candidatus Cloacamonas acidaminovorans]
 gi|167730110|emb|CAO81022.1| Ornithine decarboxylase [Candidatus Cloacamonas acidaminovorans]
          Length = 393

 Score =  159 bits (402), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 50/359 (13%), Positives = 112/359 (31%), Gaps = 26/359 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP  ++D   + N              K+  A+K      +   LN+       +S Y
Sbjct: 29  IPTPCLIVDLDIVRNKYLELQASM--PNYKIYYAVKANPMLEVIMLLNELGANFDLASPY 86

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+             ++    K                  ++   L      A       
Sbjct: 87  ELDQMLNLGIEPSRLSFGNTIKKVNDIKYFYEKGVRLFATDSKLDLANLAKYAPGSKVLF 146

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
            +    + +         + P +      K    +      G+ FH   + +    +   
Sbjct: 147 RILTEGTGADWPLSRKFGSHPDTIYHLIVKAAKMNLQPW--GISFHVGSQQRDIGQWDDA 204

Query: 179 LKNIEKEF---GHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEF----SEKYSVQI 229
           +   +  F        +++ I++GGG         + ++++   ++ F          +I
Sbjct: 205 VARCKYLFDAVAEEGIELKMINIGGGFPANYVDPTFSIQEYATEIQRFITEDFGDNLPEI 264

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE-----AHVPDYLLYQESATIYPN 284
            LEPG ++V +   + + V++++   KN +     ++       +       +    +P 
Sbjct: 265 ILEPGRSLVADAGVIVSEVINVARKSKNNLYQWVYLDIGKFGGLIETIDESIKFPIYFPR 324

Query: 285 TG-PYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338
            G     ++ G +C + DI  E   +   +    GDR+       Y  +  +  FNG  
Sbjct: 325 KGLAEEIILAGPTCDSMDILYEHYRYRMPEGTVPGDRVYIFTTGAYTQSYSSVNFNGFP 383


>gi|311899938|dbj|BAJ32346.1| putative diaminopimelate decarboxylase [Kitasatospora setae
           KM-6054]
          Length = 420

 Score =  159 bits (402), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 54/388 (13%), Positives = 109/388 (28%), Gaps = 35/388 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP YL D   + +             V++  +LK      +   L++       SS+ E
Sbjct: 14  GTPLYLYDGDAVRDQYLGLRDRLH-PVVEIFYSLKANPNISVCALLHRLGARAEVSSMAE 72

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
           ++   E     +   +    K  +        D   II  ++ +L      A  L  +  
Sbjct: 73  LVTALEAGVPADQIMFLGPGKSEQEITACLKEDIRAIICESIDELAAIDRLAADLGTRAR 132

Query: 120 LRINPSVS-YSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK- 170
           + +  + S   K           + G   +   ++E         ++ G+  +       
Sbjct: 133 VVLRVNPSFTVKGSGLTMGGKPRQFGIDEQALFDAEDLPGRHARTDLIGVQAYMGTRILS 192

Query: 171 ---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
                     +L   E+        ++ + +GGG+        +D  V      +    E
Sbjct: 193 EEAVAENTRRILDMAERLAERQGFPLDLVDVGGGLGVAYFAQEQDLDVDRLADLVNPIFE 252

Query: 224 KYSV-----QIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLY-- 275
           ++       ++ +E G  +V       + V  + E++ +   I D     H+    +   
Sbjct: 253 EFHRRRPDTRVVMELGRYLVATGGVYVSAVRYVKESMGERFAITDGGTNHHMAAVGIGSF 312

Query: 276 -----QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNIN 329
                                V G  C   D  G+       ++ GD I  E    Y   
Sbjct: 313 AKRNFPMRLLNRAGGPAAKWNVTGPLCTPNDTLGKGVELADDLRPGDLIGVERSGAYGPT 372

Query: 330 RKN-WFNGINMPTIAVKNVDGTIKAIRE 356
                F     P   +          R 
Sbjct: 373 ASPVLFLSHGYPAEVLVVDGDAQLVRRR 400


>gi|194863624|ref|XP_001970532.1| GG23323 [Drosophila erecta]
 gi|190662399|gb|EDV59591.1| GG23323 [Drosophila erecta]
          Length = 396

 Score =  159 bits (402), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 55/357 (15%), Positives = 104/357 (29%), Gaps = 23/357 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
             + D   +   L     +     +K   A+KC     +   L +   G   +S  EV L
Sbjct: 35  LNICDLSSVERKLRLWQRLLPR--IKPFYAVKCNDDPVVVRLLAELGAGFDCASKNEVKL 92

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   +    +                   ++   +K      +  + +R   
Sbjct: 93  VLGFDVPPERIIFANPCRPVSHLEYAKEHQVANGTVDNEFEVYKLHTHYPNSNLIVRFKS 152

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKI-ESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
               ++  L D     + +       + +S    V G  FH          +   +K  +
Sbjct: 153 EAKEAQCPLGDKFGCDADVDAAALMLLAKSLDLKVTGTSFHVGSGCSELEAYDRAIKKAK 212

Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEKYSVQIYLEPGEAI 237
             F         ++++ +GGG   +D     K        ++       V+I  EPG   
Sbjct: 213 NLFKFGALLGYDMDFLDIGGGFPGSDDGKFEKIAESVNTSVQRHFPNERVRIIAEPGRFF 272

Query: 238 VTNTTTLNTTVLDISE-----------NIKNLVIVDSSVEAHVPDYLLYQESATIYPNT- 285
           V    TL   +    E                  V  S    + D+ +      +     
Sbjct: 273 VAAACTLVCKIHAKREIRNEAGKLDTVMYYLNDGVYGSFNCILYDHQVVTAEHYLDNADS 332

Query: 286 -GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                +++ G SC A D   E      +  GD + F ++  Y +   + FNG  +P 
Sbjct: 333 LPQLKSLIWGPSCDALDKISEDLHLPNLNRGDLLGFRNMGAYTMPIASPFNGFELPK 389


>gi|182678066|ref|YP_001832212.1| Orn/DAP/Arg decarboxylase 2 [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|182633949|gb|ACB94723.1| Orn/DAP/Arg decarboxylase 2 [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 376

 Score =  159 bits (401), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 46/357 (12%), Positives = 107/357 (29%), Gaps = 27/357 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D + + +N             ++  A+K      + + L +      ++S+ E+ 
Sbjct: 17  PCLVLDLEVVRDNYQAFSKAL--PDTRVFYAVKANPDPQVLELLARLGSCFDTASVVEIQ 74

Query: 65  LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                    +  ++      +     A          +  +++ K    A        + 
Sbjct: 75  QVLAAGASADRISFGNTIKKERDIARAYALGVRLFAVDCEAEVEKIARAAPGSRVFCRIL 134

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
            +   +           P   L  +  +          GL FH   + ++ L + + L++
Sbjct: 135 CDGEGAEWPLSRKFGCAPS--LAPRVLEHAHRLGLQAFGLSFHVGSQQRNPLMWDSALRS 192

Query: 182 IEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLE 232
             + F         ++ ++LGGG                      L++       +  +E
Sbjct: 193 SSEIFKDLAERGITLQMVNLGGGFPTKYLRDVPAVKAYGEAIFHSLRKHFGNKIPETIIE 252

Query: 233 PGEAIVTNTTTLNTTVLDISENI-----KNLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287
           PG  +V N   +   V+ IS+       K + +                         G 
Sbjct: 253 PGRGMVGNAGVIEAEVVLISKKSEDDSVKWVYLDIGKFNGLAETMDEMIRYPIRTAFDGD 312

Query: 288 --YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338
                ++ G +C + D+  E   +     ++IG ++  E    Y     +  FNG  
Sbjct: 313 ACEPCVLAGPTCDSVDVLYEKDPYLLPISLEIGSKVLIEGTGAYTTMYSSVGFNGFP 369


>gi|159031805|dbj|BAF91874.1| ornithine decarboxylase [Nicotiana benthamiana]
          Length = 433

 Score =  159 bits (401), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 49/362 (13%), Positives = 112/362 (30%), Gaps = 26/362 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y++D  ++++ +D          ++   A+KC         L+        +S  E+ 
Sbjct: 66  PFYVLDLGEVVSLMDQWKSAL--PNIRPFYAVKCNPEPSFLSILSAMGSNFDCASRAEIE 123

Query: 65  LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                    +   +    K       A     +   +++  ++ K +    K    + ++
Sbjct: 124 YVLSLGISPDRIVFANPCKPESDIIFAAKVGVNLTTYDSEDEVYKIRKHHPKSELLLRIK 183

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE----NKSFLCFSA 177
                +    +            +      ++    V+G+ FH        N      +A
Sbjct: 184 PMLDGNARCPMGPKY-GALPEEVDPLLRAAQTARLTVSGVSFHIGSGDADSNAYLGAIAA 242

Query: 178 MLKNIEKEFGHFITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
             +  E      ++++  + +GGG           V       + F ++  + I  EPG 
Sbjct: 243 AKEVFETAAKLGMSKMTVLDVGGGFTSGHQFTTAAVAVKSALKQHFDDEPGLAIIAEPGR 302

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESA---------TI 281
                  TL TT++      +            S+   + D+     +            
Sbjct: 303 FFAETAFTLATTIIGKRVRGELREYWINDGLYGSMNCVLYDHATVNATPLAVLSNRSNVT 362

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
              +  +   V G +C A D     +    +++ D + F ++  Y     + FNG N   
Sbjct: 363 CGRSKTFPTTVFGPTCDALDTVLRDYQLPELQVNDWLVFPNMGAYTKAAGSNFNGFNTSA 422

Query: 342 IA 343
           I 
Sbjct: 423 IV 424


>gi|332020341|gb|EGI60763.1| Ornithine decarboxylase [Acromyrmex echinatior]
          Length = 471

 Score =  159 bits (401), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 54/373 (14%), Positives = 113/373 (30%), Gaps = 27/373 (7%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y++D   ++          K   V+   A+KC     + + L         +S  E+  
Sbjct: 36  FYVLDIGDIVQKHKIWKE--KLPRVEPYYAVKCNDNLIVIEVLAALGINFDCASKNEINK 93

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                       +    K             +T+  +  S+L+K K         + +R 
Sbjct: 94  VLSFGVESSRIIFANPAKPASHIRHAAAVGVETMTVDNESELHKIKKLFPTAKIVLRIRC 153

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           +  ++     +     P             +   NV G  FH     +    F   + + 
Sbjct: 154 DAEMAQCPLGMKFGCDPIHEAPNLL-HLAYNLGLNVIGFSFHVGSGCQDPPVFYRAIHHC 212

Query: 183 EKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV----QIYLEPGE 235
           +  F        +   + LGGG     K   +    + + +  ++Y       +  EPG 
Sbjct: 213 KILFDMATDLGFKPYLLDLGGGYPGN-KGTSIDKIAEIINKALDEYFNTDAVHVIAEPGR 271

Query: 236 AIVTNTTTLNTTVLD-------------ISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
             V +  TL T++                         V  S    + D+          
Sbjct: 272 FYVASAFTLATSIHSKRSIRGDENSSAITHNMYYINDGVYGSFNCLLYDHQHVTPIPLKN 331

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
                  + V G +C   D   E      +++G+ + FE++  Y +   + FNG  +P +
Sbjct: 332 GCGKMIPSSVWGPTCDGLDKIVENIMLNDMELGEWMIFENMGAYTLPVASPFNGFPIPKV 391

Query: 343 AVKNVDGTIKAIR 355
            +   +     ++
Sbjct: 392 HIVADEDIWLLLK 404


>gi|258578139|ref|XP_002543251.1| ornithine decarboxylase [Uncinocarpus reesii 1704]
 gi|237903517|gb|EEP77918.1| ornithine decarboxylase [Uncinocarpus reesii 1704]
          Length = 446

 Score =  159 bits (401), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 54/359 (15%), Positives = 111/359 (30%), Gaps = 29/359 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y+ D  ++        +      VK   A+KC     +   +    +G   +S  E+ 
Sbjct: 70  PFYVADLGEIYR--QHVRWKMNLGRVKPFYAVKCNPDPQVLRLMAHLGNGFDCASKAEID 127

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                        Y    K        +          +    +K KA     ++ LRI 
Sbjct: 128 YALDAGVDPSRIIYAHPCKTKSYLRYAAQQGVKQMTFDNADELYKIKAMCPDAELFLRIL 187

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S S   L+        +     +  +    NV G+ FH     +    F   +++  
Sbjct: 188 TDDSASLCRLSMKFGASLTVTRSLLELAKELDLNVVGVSFHVGSGAEDPKAFVKAVEDAR 247

Query: 184 KEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
             F         ++ + +GGG      ++        L  +   + +++  EPG   V +
Sbjct: 248 FVFDQASDIGHDLKVLDVGGGFCDETFEHFAAALSDALDTYFPPH-IRVIAEPGRYYVAS 306

Query: 241 TTTLNTTVLDISEN--------------IKNLVIVDSSVEAHVPDYLLYQESA------- 279
             TL   V+   +                  ++ ++  V  +  + +   +         
Sbjct: 307 AFTLAANVIARRDVSPSASDSDSSTGPAEMYMIYLNDGVYGNFSNIVFDHQHPVAQILTK 366

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGI 337
               +T P    + G +C   D+  E       + +G+ + FE++  Y       FNG 
Sbjct: 367 DDITSTHPVEYSIWGPTCDGIDVISERITLNGVLGVGNWLYFENMGAYTRCSATRFNGF 425


>gi|17562780|ref|NP_504752.1| Ornithine DeCarboxylase family member (odc-1) [Caenorhabditis
           elegans]
 gi|12644263|sp|P41931|DCOR_CAEEL RecName: Full=Ornithine decarboxylase; Short=ODC
 gi|1658364|gb|AAB18317.1| Ornithine decarboxylase protein 1, partially confirmed by
           transcript evidence [Caenorhabditis elegans]
          Length = 422

 Score =  159 bits (401), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 51/380 (13%), Positives = 117/380 (30%), Gaps = 34/380 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           + L+D  K++          +   ++   A+KC     +   L     G   +S  E+ +
Sbjct: 42  FMLVDLDKIIERFQLWKR--ELPMIEPFYAVKCNTDLVLIRILASLGCGFDCASKDEIDI 99

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K     A   + D  +    +     K      + ++ LRI  
Sbjct: 100 VMGTGVSAERIIYANPCKTRSFIAHAMDRDVKMMTFDNPEELLKIAKLHPNAEMILRIAV 159

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIE---SEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           S   +   L                 ++    E  NV G+ FH          +   L++
Sbjct: 160 SDPTATCPLNLKFGADPI--IAAPQLLKTASEEGINVVGISFHVGSGCNDASAYRNALQH 217

Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI--------- 229
            +           +++ I +GGG    +   P +   + +++  +++             
Sbjct: 218 AKNLCEIGEGLGFKMDIIDMGGGFPGAEHHNPFEKIAETIRDALDEFFPDTNKRLIAEPG 277

Query: 230 -YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP- 287
            +   G   +       T V             D     ++ D +    +  ++ +  P 
Sbjct: 278 RFFAAGPFSLVANIIHATEVPASKITKDPKDCADHGYMYYINDGVYGSFNCILFDHAHPI 337

Query: 288 ------------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                       + + + G +C + D+  +      + +G+ + + D+  Y +     FN
Sbjct: 338 GSPLFDTDRNEKFMSTIWGPTCDSLDLVEDKKLMPKMNVGEWLYYPDMGAYTLAAATTFN 397

Query: 336 GINMPTIAVKNVDGTIKAIR 355
           G + P       +   ++IR
Sbjct: 398 GFSKPVPMYVMSEEMWESIR 417


>gi|70994492|ref|XP_752025.1| ornithine decarboxylase [Aspergillus fumigatus Af293]
 gi|66849659|gb|EAL89987.1| ornithine decarboxylase [Aspergillus fumigatus Af293]
 gi|159125062|gb|EDP50179.1| ornithine decarboxylase [Aspergillus fumigatus A1163]
          Length = 453

 Score =  159 bits (401), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 55/360 (15%), Positives = 111/360 (30%), Gaps = 31/360 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D  ++        +      VK   A+KC     +   + +  +G   +S  E+ L
Sbjct: 76  FYVADMGEIYR--QHLRWKMNLGRVKPFYAVKCNPDPEILRLMAKLGNGFDCASKAEIDL 133

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             E         Y    K        +          +    +K KA     ++ LRI  
Sbjct: 134 ALETGIDPSRIIYAQPCKTKSYLRYAAKVGVKQMTFDNADELYKIKACYPDAELYLRILT 193

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S S   L+        +  +  +        V G+ FH     +    F   +++   
Sbjct: 194 DDSTSLCRLSMKFGASLDIARQLLELAHELELKVVGVSFHVGSGAEDPRAFLKAVQDARL 253

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            F        ++  + +GGG      +       + L  +   + +++  EPG   V + 
Sbjct: 254 VFDQAAEVGHELHTLDVGGGFCQDTFEKFAGILSEALDTYFPPH-IRVIAEPGRYYVASA 312

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY------------- 288
            TL   V+   +        + +   ++ D +    S  I+ +  P              
Sbjct: 313 FTLAANVIARRDVRDPKDPANDTYMLYLNDGVYGNFSNIIFDHQHPVAKILTCSGETQPS 372

Query: 289 ----------TAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGI 337
                        + G +C   D+  +       + +GD + FE++  Y       FNG 
Sbjct: 373 ALNAATSEGIAYSIWGPTCDGIDVITQRIVLPGLLDVGDWLYFEEMGAYTKCSATRFNGF 432


>gi|300785911|ref|YP_003766202.1| diaminopimelate decarboxylase [Amycolatopsis mediterranei U32]
 gi|299795425|gb|ADJ45800.1| diaminopimelate decarboxylase [Amycolatopsis mediterranei U32]
          Length = 431

 Score =  159 bits (401), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 48/397 (12%), Positives = 110/397 (27%), Gaps = 35/397 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D  +L   L           +++  +LK      +   L+ +      SS+ E
Sbjct: 20  GTPLFVYDGDELGGRLLGLREQLH-PRLEIFYSLKANPNISVCALLHAHGARAEVSSMAE 78

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIG 119
           ++        GE   +    K     A   +    T++  +  +L    + A++   +  
Sbjct: 79  LITARRAGVAGEDIIFLGPGKSTSELAACLDEGVYTVVCESFGELKILDELARERGIEAR 138

Query: 120 LRINPSVS-YSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCENKS 171
           + +  + S   K           + G   +  + +           + G+  +       
Sbjct: 139 VALRVNPSFAVKGSGLTMGGKPRQFGIDEEQLLAATDLVDRHPNLRLMGVQVYMGTRILD 198

Query: 172 ----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
                     + +  E+        ++ + +GGG+        +D         L    +
Sbjct: 199 EEPIVENTRRIFELAERVSRRLGFPLDMVDVGGGLGVAYFDGERDLDRDLLASLLNPVID 258

Query: 224 KYSV-----QIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQE 277
           +++      ++ +E G  +   + T    V     +  +N  + D     H+    +   
Sbjct: 259 EFAQRHPATRLVMELGRYLAATSGTYVVRVRYTKTSLGQNFAVADGGTNHHMAAVGIGSY 318

Query: 278 S--------ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
                              T  V G  C   D+  +     PV+ GD +       Y   
Sbjct: 319 VKRDFPIRLLNRIDEPATETWQVTGPLCTPNDVLAKKAALPPVRPGDLVGVTRSGAYGPT 378

Query: 330 RKN-WFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
                F     P   + +              D    
Sbjct: 379 ASPVLFLSHGYPAEVIVHCGRHYLVSERDEPADLLRR 415


>gi|15724139|gb|AAL06466.1|AF411043_1 ornithine decarboxylase [Musca domestica]
 gi|1297346|gb|AAA98981.1| ornithine decarboxylase [Musca domestica]
          Length = 396

 Score =  159 bits (401), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 53/365 (14%), Positives = 106/365 (29%), Gaps = 26/365 (7%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            ++ D  +L    D          VK   A+KC     +  TL +       +S  E+  
Sbjct: 32  LFVCDLTRLKEKYDMWTKYMPR--VKPYYAVKCNDDGHIVKTLAELGTNFDCASKGEIKQ 89

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             +     +   +    K             +     ++    K         + +R   
Sbjct: 90  VLDLGVHPDRIIFAQPCKPISHLEYAKEMGVMTSTVDTEFEIHKLHKHFPESNLVIRFRC 149

Query: 125 SVSYSKFILADPNRPFSR-LGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
               ++  L D     +           +S    V G  FH          +   +   +
Sbjct: 150 EAKEAQCPLGDKFGCDAENEATSLMLLAKSLNLKVIGTSFHVGSGCNDLPAYDRAITIAK 209

Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV----QIYLEPGEA 236
             F        ++  + +GGG   +D     +   + + +   ++       I  EPG  
Sbjct: 210 NLFKFGALLGYEMNLLDIGGGFPGSDNKK-FEKIAEIVNKSLMRHFPDDKVNIIAEPGRF 268

Query: 237 IVTNTTTLNTTVLD-----------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285
            V +  TL   +             +++       V  S    + D+   +    +    
Sbjct: 269 FVASAYTLICKIHAKGEARLPNGKLLTKMYYLNDGVYGSFNCILYDHQHAEVQHFVDEEN 328

Query: 286 GPYTAM---VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
                    + G +C A D   E      +K GD ++F ++  Y I   + FNG  +P I
Sbjct: 329 AEVPKFNSLIWGPTCDALDKIAEDLQLPDLKCGDFLAFPNMGAYTIPIASPFNGFMLPKI 388

Query: 343 AVKNV 347
              + 
Sbjct: 389 LYFHK 393


>gi|222087145|ref|YP_002545680.1| ornithine decarboxylase protein [Agrobacterium radiobacter K84]
 gi|221724593|gb|ACM27749.1| ornithine decarboxylase protein [Agrobacterium radiobacter K84]
          Length = 377

 Score =  159 bits (401), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 45/359 (12%), Positives = 103/359 (28%), Gaps = 33/359 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   + +N     +   ++   +  A+K   A  +   L         +S+ E+ 
Sbjct: 18  PCLVVDLDVVRDNFRAFRHAMPDSA--IYYAVKANPAPEVLRLLASLGSNFDCASVAEIE 75

Query: 65  LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +           ++      +     A          ++  ++ K    A        + 
Sbjct: 76  MALDAGATAARISFGNTIKKERDVARAHALGISLFAVDSHEEVEKISRAAPGARVFCRVL 135

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179
            +   +           P   +       + +    +   G+ FH   +      + A L
Sbjct: 136 TDGEGAEWPLSRKFGCVPQMAVDV----LVYAHQLGLESYGVSFHVGSQMTKVDAWDAAL 191

Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIY 230
            + ++ F         ++ +++GGG                      L+           
Sbjct: 192 ADAKRVFVSLAKQGIHLQMVNMGGGFPTKYLRDVPSAEAYGKAIFASLRAHFGNQIPHTI 251

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282
           +EPG  +V N   +   V+ IS+   N               +   + + + Y       
Sbjct: 252 IEPGRGMVGNAGVIKAEVVLISKKSDNDDARWVFLDIGKFGGLAETMDEAIRYPIRTERD 311

Query: 283 PNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337
            +      ++ G +C + D+  E   +     + IGD +  E    Y        FNG 
Sbjct: 312 GDEM-EPCIIAGPTCDSADVLYEKNLYPLPVTLTIGDEVLIEGTGAYTTTYSAVAFNGF 369


>gi|6469279|emb|CAB61758.1| ornithine decarboxylase [Mucor circinelloides f. lusitanicus]
          Length = 433

 Score =  159 bits (401), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 55/374 (14%), Positives = 111/374 (29%), Gaps = 35/374 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  +++        +     ++   A+KC     +   L     G   +S  E+  
Sbjct: 60  FFVGDLGEVVRQHIRWKSLLPR--IEPFYAIKCNPDPMVVQLLASLGCGFDCASKQEIQQ 117

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             +         Y    K        +  +       +    FK K      ++ LRI  
Sbjct: 118 VLDVGVDPSRIIYANPCKQASFIRYSAQQNVSRMTFDNAEELFKIKKYYPDAELVLRILT 177

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN---KSFLCFSAMLKN 181
             S S   L           +      +    NV G+ FH         +F       KN
Sbjct: 178 DDSMSLCQLGLKFGAPLHTVQHLLQLAKELNLNVIGVSFHVGSGCLDENAFGDAVVRAKN 237

Query: 182 IEKEFGHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYSV---QIYLEPGEA 236
           +  +        +++ +GGG    D       +     L    ++      ++  EPG  
Sbjct: 238 VFDQAKAMGYDFKFLDVGGGFPGADVKNGITFEKVAAVLGPIVDRLFPKDVRVIAEPGRY 297

Query: 237 IVTNTTTLNTTVLDISENIKNLVI--------------VDSSVEAHVPDYLLYQESATIY 282
            V +   L   V+    N+ +                 +  SV   + D+ +      + 
Sbjct: 298 YVASAFNLAVNVIGRRTNMAHQDQTDASPEYMYYVNDGMYGSVNCIIFDHQVVHPKVLMK 357

Query: 283 P---------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                         Y + V G +C + D   +      ++ GD + FE++  + I   + 
Sbjct: 358 NELFAYGQDLPEAQYESSVWGPTCDSIDCLNKSARLPKLEPGDWLYFENMGAHTICAASQ 417

Query: 334 FNGINMPTIAVKNV 347
           FNG    +  +   
Sbjct: 418 FNGFRK-SEVLYTN 430


>gi|255936309|ref|XP_002559181.1| Pc13g07510 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583801|emb|CAP91820.1| Pc13g07510 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 448

 Score =  159 bits (401), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 56/360 (15%), Positives = 106/360 (29%), Gaps = 31/360 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D  ++        +      VK   A+KC     +   + Q  +G   +S  E+ +
Sbjct: 71  FYVADMGEVYR--QHMRWKMNLGRVKPFYAVKCNPDPEVLRLMAQLGNGFDCASKSEIDM 128

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             +         Y    K        S          +    +K KA     ++ LRI  
Sbjct: 129 ALQTGIDPSRIIYAQPCKTKSYLRYASEVGVKQMTFDNADELYKIKATFPEAELYLRILT 188

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S S   L+              +        V G+ FH     +    F   +++   
Sbjct: 189 DDSTSLCRLSMKFGASMDQARMLLELAYKLELKVVGVSFHVGSGAEDPRAFLKAVQDARM 248

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            F        ++  + +GGG      +       + +  +     +++  EPG   V   
Sbjct: 249 VFDQAAEIGHELHTLDVGGGFCQDTFEKFAGILGEAVDTYFPPN-IRVIAEPGRYYVATA 307

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY------------- 288
            TL   V+   +          +   ++ D +    S  I+ +  P              
Sbjct: 308 YTLAANVIARRDIPDPDDPSRDAFMLYLNDGVYGNFSNIIFDHQHPVAQVLTCAADSPPG 367

Query: 289 ----------TAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGI 337
                     T  + G +C   D+  E       +  GD + FE++  Y       FNG 
Sbjct: 368 SPNSATSEDITYSIWGPTCDGIDVISERIALPGLLNTGDWLYFEEMGAYTKCSATRFNGF 427


>gi|109103106|ref|XP_001084503.1| PREDICTED: ornithine decarboxylase isoform 2 [Macaca mulatta]
          Length = 461

 Score =  159 bits (401), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 65/392 (16%), Positives = 120/392 (30%), Gaps = 41/392 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       ++     V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 40  FYVADLGDILK--KHLRWLNALPRVTPFYAVKCNDSKAIMKTLAAVGTGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
               +   E   Y    K        +N    +    S++   K        K+ LRI  
Sbjct: 98  VQSLRVPPERIIYANPCKQVSQTKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+   R   R      ++ +    +V G+ FH          F   + +   
Sbjct: 158 DDSKAVCCLSVKFRATLRNSRLLLERAKEVNIDVVGVSFHAGSGCTDPETFVQAISDTRC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           + F     V+I  +PG 
Sbjct: 218 VFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITSIINPALDRYFLSDSGVRIIAKPGR 277

Query: 236 AIVTNTTTLNTTVL-------------------------DISENIKNLVIVDSSVEAHVP 270
             V +  TL   ++                          ++  +           AHV 
Sbjct: 278 YYVASAFTLAVNIISKKIVLKEQTGSDDEDESSEQTFMCYVNYGVYGSFNCILYDHAHVK 337

Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
             L  +           Y++ + G  C   D   E      + +GD + FE++  Y +  
Sbjct: 338 PLLQKRPKPD----KKYYSSSIWGPICDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAA 393

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
            + FNG   P I         +  ++F   D+
Sbjct: 394 ASTFNGFQRPVIYYVMSGPAWQLTQQFQNPDF 425


>gi|259496073|gb|ACW82828.1| ornithine decarboxylase [Spodoptera litura]
          Length = 448

 Score =  159 bits (401), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 61/360 (16%), Positives = 111/360 (30%), Gaps = 25/360 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y++D  +++        +     V+   A+KC     +  TL     G   +S  E+ 
Sbjct: 35  PFYVMDLGEVVARYHRWKELMPR--VEPFYAVKCNDDKLLVSTLAALGTGFDCASKAEIE 92

Query: 65  LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           L        +   +            A     D + F++ ++L K K         I +R
Sbjct: 93  LVTSIGVAPDRIIFANPAKMASHIRFASAVGVDVMTFDSETELMKIKQYMPHAQLVIRIR 152

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
            + + +     +     P +      K        +V G+ FH          ++  +  
Sbjct: 153 CDAASAQCPLGIKFGCDPVTEAPRLLK-LAAVFGLDVIGVSFHVGSGASETDVYARAIAL 211

Query: 182 IEKEF---GHFITQ-IEWISLGGGIH---FTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
               F    +   + +  + +GGG      T            L+E   + SV++  EPG
Sbjct: 212 SRALFLVGHNVGHKAMRILDIGGGFPGGTHTSIQEVSAVINSALEEHFPERSVRVIAEPG 271

Query: 235 EAIVTNTTTLNTTVLD------------ISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
                   TL   V                        V  S    + D+          
Sbjct: 272 RYFAAAAYTLAAMVHAKREVTSKECADETHTMYFINDGVYGSFNCVLYDHQHVVAEPLND 331

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
             + P    V G +C   D          + IGD + F D+  Y +   + FNG  +PT+
Sbjct: 332 NGSVPAPCSVWGPTCDGLDCVLPATRLPSLAIGDWLIFRDMGAYTLPVASPFNGFPVPTV 391


>gi|254463855|ref|ZP_05077266.1| Orn/DAP/Arg decarboxylases family 2 [Rhodobacterales bacterium Y4I]
 gi|206684763|gb|EDZ45245.1| Orn/DAP/Arg decarboxylases family 2 [Rhodobacterales bacterium Y4I]
          Length = 389

 Score =  159 bits (401), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 59/362 (16%), Positives = 120/362 (33%), Gaps = 24/362 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  +ID   +                ++  A+K   A  + +TL +      ++S  E+ 
Sbjct: 31  PTLVIDSHAVARQYQALDRGLGR--ARIHYAVKANPAPEVLETLVRLGSNFDAASRAEIE 88

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +        E   +    K     A         F   +Q    K         + LR+ 
Sbjct: 89  MCLAAGARAEQITFGNTIKRPADIAFAHGIGITHFAADAQEELEKLAEFAPGAHVCLRVI 148

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S + + L+      + +     D        V+GL FH   + +  L ++ +L  + 
Sbjct: 149 VEASGADWPLSRKFGSSASMALSLMDAAAGLGLTVHGLSFHVGSQTRDPLMWAPVLDQVA 208

Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPV--KDFCQRLKEFSEKYSVQ---IYLEPGE 235
           + +         ++ +++GGG   + K   +  +D+ + + E  +        +  EPG 
Sbjct: 209 EVWTAGRAAGHDLKLVNIGGGFPASYKTEVMGAEDYARAVMEQVDARFPDAAEVMAEPGR 268

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPNTGP 287
            +V     +   VL +S    + +           S +   + + + YQ   T   +   
Sbjct: 269 GLVAEAGAIAAEVLLVSRKHADDMFRWVYLDIGKFSGLAETMDEAIRYQ-ITTSREHEPT 327

Query: 288 YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIA 343
              ++ G SC + D+  E         +K GDR+       Y     +  FNG     + 
Sbjct: 328 GPCVLAGPSCDSADVLYEKQLVQLPLGLKAGDRVVIHSCGAYTSTYASVGFNGFPPLDVV 387

Query: 344 VK 345
           V 
Sbjct: 388 VI 389


>gi|413768|gb|AAA88795.1| ornithine decarboxylase [Caenorhabditis elegans]
          Length = 422

 Score =  158 bits (400), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 51/380 (13%), Positives = 117/380 (30%), Gaps = 34/380 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           + L+D  K++          +   ++   A+KC     +   L     G   +S  E+ +
Sbjct: 42  FMLVDLDKIIERFQLWKR--ELPMIEPFYAVKCNTDLVLIRILASLGCGFDCASKDEIDI 99

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K     A   + D  +    +     K      + ++ LRI  
Sbjct: 100 VMGTGVSAERIIYANPCKTRSFIAHAMDRDVKMMTFDNPEELLKIAKLHPNAEMILRIAV 159

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIE---SEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           S   +   L                 ++    E  NV G+ FH          +   L++
Sbjct: 160 SDPTATCPLNLKFGADPI--IAAPQLLKTASEEGINVVGISFHVGSGCNDASAYRNALQH 217

Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI--------- 229
            +           +++ I +GGG    +   P +   + +++  +++             
Sbjct: 218 AKNLCEIGEGLGFKMDIIDMGGGFPGAEHHNPFEKIAETIRDALDEFFPDTNKRLYREPG 277

Query: 230 -YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP- 287
            +   G   +       T V             D     ++ D +    +  ++ +  P 
Sbjct: 278 RFFAAGPFSLVANIIHATEVPASKITKDPKDCADHGYMYYINDGVYGSFNCILFDHAHPI 337

Query: 288 ------------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                       + + + G +C + D+  +      + +G+ + + D+  Y +     FN
Sbjct: 338 GSPLFDTDRNEKFMSTIWGPTCDSLDLVEDKKLMPKMNVGEWLYYPDMGAYTLAAATTFN 397

Query: 336 GINMPTIAVKNVDGTIKAIR 355
           G + P       +   ++IR
Sbjct: 398 GFSKPVPMYVMSEEMWESIR 417


>gi|289449867|ref|YP_003474367.1| carboxynorspermidine decarboxylase [Clostridiales genomosp. BVAB3
           str. UPII9-5]
 gi|289184414|gb|ADC90839.1| carboxynorspermidine decarboxylase [Clostridiales genomosp. BVAB3
           str. UPII9-5]
          Length = 460

 Score =  158 bits (400), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 99/290 (34%), Positives = 153/290 (52%), Gaps = 9/290 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P ++ID+Q L  NL     +++  G K+LLA K FA +  +  + QY+DGTT+S LY
Sbjct: 18  LPSPAFIIDEQLLTANLKKLHLVKEKTGCKILLAQKAFATFSTYPLIGQYLDGTTASGLY 77

Query: 62  EVMLGHEKFGG-ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--I 118
           E  LGHE+  G E H ++  +   EI  +L   D I+FN+ SQ   F+D+ +        
Sbjct: 78  EARLGHEEMPGREIHCFSPGFTKYEIGQLLDFTDHIVFNSFSQWLTFRDQIKFATHPVSC 137

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE----SEIKNVNGLMFHNNCENKSFLC 174
           GLRINP  S     L DP    SRLG +  D ++      ++ + GL FH  CE  S   
Sbjct: 138 GLRINPEYSEVATALYDPCSSSSRLGIRLNDFLDGAAKGLLEGIEGLHFHCLCEQGS-DA 196

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
                + +++ FG F+ +++WI++GGG H T  DY +   C  +K+    + + +YLEPG
Sbjct: 197 LLHTWEVVKRNFGSFLPKMKWINMGGGHHITKDDYDLDTLCSVIKDAQNSFGLTVYLEPG 256

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYP 283
           EA+  N   L  TVLD+  +      + D+S   H+PD L       ++P
Sbjct: 257 EAVALNAGFLKATVLDVVPSGDMPCAILDTSAACHMPDVLEMPYQPRVFP 306



 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 31/79 (39%), Positives = 49/79 (62%)

Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
           Y   + G +CLAGD+ G ++F  P+  GD++ F D+A Y++ + N FNG+ +P I +   
Sbjct: 382 YPYRLAGPTCLAGDVIGSYNFPAPLFPGDQVFFCDMAIYSMVKTNTFNGMPLPAIVLLQP 441

Query: 348 DGTIKAIREFSYNDYYNNL 366
           DG +  +R FSY D+ N L
Sbjct: 442 DGKVTVLRRFSYADFRNRL 460


>gi|319406162|emb|CBI79799.1| lysine/ornithine decarboxylase [Bartonella sp. AR 15-3]
          Length = 377

 Score =  158 bits (400), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 50/359 (13%), Positives = 109/359 (30%), Gaps = 33/359 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   +  N          +  ++  A+K   A  +   L        ++S+ E+ 
Sbjct: 18  PCLVVDLDVVHENYLNFEKALPQS--RIFYAIKANPAPEILRLLVSLGSSFDAASIAEIE 75

Query: 65  LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +  E     +  ++      +     A          +   ++ K    A        + 
Sbjct: 76  MALEAGATADRISFGNTIKKERDIARAYAFGVSLYAVDCFEEVEKVACAAPGARVFCRVL 135

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179
            +   +           P   +         +    +   G+ FH   +      +   L
Sbjct: 136 TDGEGAEWPLSQKFGCVPSMAVDV----LRYAHHLGLQACGVSFHVGSQQTDLNAWDRAL 191

Query: 180 KNIEKEFG---HFITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIY 230
            +    F        Q++ +++GGG                      LK++      +  
Sbjct: 192 SDTAFVFRSLEQEGIQLQLVNMGGGFPTRYLKDIPTVQTYGMAIFDSLKKYFGNRIPETI 251

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282
           +EPG A+V N   + T V+ IS+   +  +          + +   + + + Y    T Y
Sbjct: 252 IEPGRAMVGNAGVIRTEVVLISKKATSDNVRWVYLDVGKFNGLTETMDEAIRYP-IETAY 310

Query: 283 PNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337
            +      ++ G +C + DI  E   +     + IGD +       Y     +  FNG 
Sbjct: 311 DDKAMEPCILAGPTCDSADIMYEKTPYLLPLSLTIGDELLIHGTGAYTTTYASVAFNGF 369


>gi|67479463|ref|XP_655113.1| ornithine decarboxylase [Entamoeba histolytica HM-1:IMSS]
 gi|56472227|gb|EAL49727.1| ornithine decarboxylase, putative [Entamoeba histolytica HM-1:IMSS]
 gi|60686955|gb|AAX35675.1| ornithine decarboxylase [Entamoeba histolytica]
          Length = 413

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 59/352 (16%), Positives = 119/352 (33%), Gaps = 25/352 (7%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D + +   ++          V+   A+KC     +   L +   G   +SL E+  
Sbjct: 28  FWIFDTEGVEKAVERWKK--NMPTVRPCFAVKCNPEPHLVKLLGELGCGFDCASLNEIKE 85

Query: 66  GHE-KFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
             +  F  E   Y+  +K      +A     +  I +++ ++ K    A K+   I +  
Sbjct: 86  VLDLGFNPEDITYSQTFKPYNQLIEASHLGINHTIVDSIDEVQKIAKYAPKMGIMIRIM- 144

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS---FLCFSAML 179
               S               +    K+ I+ +  N++G+ FH   ++ +   F       
Sbjct: 145 ENDTSAGHVFGEKFGLHDDEVEIVLKE-IKDKGLNLDGVHFHVGSDSHNSEVFTKALTKA 203

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ-RLKEFSEKYSVQIYLEPGEAIV 238
           +N       F  +   I +GGG              +  +KE       +   EPG  + 
Sbjct: 204 RNTVTLAEQFGMKPYLIDIGGGFSQVAPFEEFAATIEKTIKELEFPERTRFIAEPGRYMA 263

Query: 239 TNTTTLNTTV----LDISENIKNLVIVDSSVEAHVPDYLLYQES--------ATIYPNTG 286
           +N   L +++    + I    K +               ++ E           +  NT 
Sbjct: 264 SNAFHLVSSLHGKRVRIQNGKKQIEYTSGDGLHGSFGCCIWFEKQKSCECITQKVNENTK 323

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIG-DRISFEDVAGYNINRKNWFNGI 337
            Y +++ G SC   D          ++ G D + F ++  Y I+    FNG 
Sbjct: 324 MYESIIYGPSCNGSDKVAT-QELPEMEPGKDWLLFPNMGAYTISMATNFNGF 374


>gi|302654764|ref|XP_003019181.1| ornithine decarboxylase, putative [Trichophyton verrucosum HKI
           0517]
 gi|291182888|gb|EFE38536.1| ornithine decarboxylase, putative [Trichophyton verrucosum HKI
           0517]
          Length = 460

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 58/389 (14%), Positives = 107/389 (27%), Gaps = 42/389 (10%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y+ D  ++               VK   A+KC     +   +    +G   +S  E+ 
Sbjct: 73  PFYVADLGEVYRQHIRWKTNLPR--VKPFYAVKCNPNPQVLRLMAVLGNGFDCASKAEID 130

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           L            Y    K        S          +    +K K      ++ LRI 
Sbjct: 131 LALAAGVDPSRIIYAHPCKTKSYLRYASQVGVKQMTFDNTDELYKIKEMCPDAELYLRIL 190

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S S   L+              +       NV G+ FH     +    F   +++  
Sbjct: 191 TDDSASLCRLSMKFGASLSSARPLLELAHGLGLNVVGVSFHVGSGAEDPKSFIKAVQDAR 250

Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
             F         ++ + +GGG      +         L  +   + +++  EPG   V  
Sbjct: 251 FVFDRAAEIGFDLKVLDVGGGFSDDTFEPFAAALGDALDTYFPPH-IRVIAEPGRYYVAT 309

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVP-----DYLLYQESATI-------------- 281
             TL   V+   +      + DS  ++  P               +              
Sbjct: 310 AFTLAANVIARRDVGVEEPLSDSESDSTTPSRASTPSSSGAYMIYLNDGVYGNFSNIVFD 369

Query: 282 -------------YPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYN 327
                           + P    + G +C   D+  E       + +G+ + FE++  Y 
Sbjct: 370 HQHPVAQILTKDDDYTSAPIEYSIWGPTCDGIDVISERVTLNGLLGVGNWLYFENMGAYT 429

Query: 328 INRKNWFNGI--NMPTIAVKNVDGTIKAI 354
                 FNG       I +    G    +
Sbjct: 430 QCSATRFNGFTDKHEVIYIVTEPGAAALL 458


>gi|241654744|ref|XP_002411340.1| ornithine decarboxylase, putative [Ixodes scapularis]
 gi|215503970|gb|EEC13464.1| ornithine decarboxylase, putative [Ixodes scapularis]
          Length = 442

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 60/374 (16%), Positives = 113/374 (30%), Gaps = 24/374 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y++D   L   +D        A      A+KC     + + L     G   +S+ E+ 
Sbjct: 60  PFYVVDIDDLFYRMDLWRKSIPRAA--PYYAVKCNDNPVVLEVLAGSGLGFDCASINEIE 117

Query: 65  -LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
            +           Y    K         +    +    S    +K K      ++ LR+ 
Sbjct: 118 TMIALGVDPSRIIYAHPQKHVSFIRRARDLGVDLVTFDSSEELYKIKEHHPTCRVVLRLR 177

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS---FLCFSAMLK 180
                + F + D      +   +     +     V G+ FH    N+    F    A  +
Sbjct: 178 VDNDKAWFAMGDKFGCTDKEAVQLLRLAKDLQLAVVGICFHVGSSNQDPTAFAGAIAGAR 237

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL------KEFSEKYSVQIYLEPG 234
                       +  + +GGG     +  P+      +      K F E Y V I  EPG
Sbjct: 238 RAFDAARAMGFDVTLLDIGGGYPGEKESEPIFLKTADIINEGLEKYFPESYGVNIISEPG 297

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES------------ATIY 282
              V +  TL   ++    N          +  ++ + +                   + 
Sbjct: 298 TFFVHSAFTLFAKIIGKRINEGQNNTKPRQMMYYINESVYKSFVVSLFNDDPVEPLPLMD 357

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
            +   + ++V G +C   D          + +G  + FE++  Y I     FNG     I
Sbjct: 358 SDGPLHESIVWGITCDGLDKIKASCKLPELSVGQWLMFENMGAYTITLNTPFNGFPSADI 417

Query: 343 AVKNVDGTIKAIRE 356
             ++       +R 
Sbjct: 418 VYRSSKLVEDHLRR 431


>gi|162455320|ref|YP_001617687.1| hypothetical protein sce7038 [Sorangium cellulosum 'So ce 56']
 gi|161165902|emb|CAN97207.1| lysA [Sorangium cellulosum 'So ce 56']
          Length = 427

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 51/386 (13%), Positives = 102/386 (26%), Gaps = 32/386 (8%)

Query: 10  DKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE- 68
           D  ++   +          G    +A+K      +         G  ++SL EV L    
Sbjct: 34  DLGRMRARIGRIGAAFP-PGALHTVAIKANPLVEVLRAAVDCGAGLEAASLEEVKLSLAA 92

Query: 69  KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK--LHKKIGLRINPS 125
               +   Y + A    +I   L     I  + + +L +  +         +IGLRINP 
Sbjct: 93  GCPPDRIVYDSPAKSRADIAEALRLGVRINADNLDELGRIDELVGHGGAASRIGLRINPQ 152

Query: 126 VSYSKFILADPNRPFSRLGEKCKDKI-----ESEIKNVNGLMFHNNCE----NKSFLCFS 176
           V  S   L       S+ G   +         +    + GL  H   +    ++      
Sbjct: 153 VGASSIALTSVADRRSKFGVPLEQADAVRAAFARYAWLAGLHVHVGSQGCALSQLIDGIG 212

Query: 177 AMLKNIEKEFGHFIT-QIEWISLGGGIHFTDKDYPVKD----FCQRLK---EFSEKYSVQ 228
            +    ++            + +GGG+    +          +   L+       +    
Sbjct: 213 RVEALRQELRRAMGPLAAGTMDIGGGLPVAYRSTDRPPALEDYAAALRREVPTLFEEGTT 272

Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV--PDYLLYQESATIYPNTG 286
           +  E G  I        + V  + ++      +       +    Y              
Sbjct: 273 LITEFGRWIQAGCGFAVSRVEYVKKDSAGRTAILHLGADFLLRRAYHPDDWHHDFMALDP 332

Query: 287 PY--------TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
                        + G  C  GD+         +  GD +   D   Y ++  +      
Sbjct: 333 EAEPKGGPLSPCTLGGPLCFGGDVLARELAFPELSPGDLVLIRDTGAYTLSMWSRHCSRG 392

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364
           +P +   + D            D   
Sbjct: 393 IPAVLGVDADDLRVLRERELPEDVVA 418


>gi|302868326|ref|YP_003836963.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Micromonospora aurantiaca ATCC 27029]
 gi|302571185|gb|ADL47387.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Micromonospora aurantiaca ATCC 27029]
          Length = 384

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 49/373 (13%), Positives = 105/373 (28%), Gaps = 32/373 (8%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+YL D   + + +        + GV L  A+K      +   L   +DG   +S  E+
Sbjct: 13  TPFYLYDFAAVRHRVAELRAALPD-GVLLHYAIKANPMPALVQRLAPLVDGLDVASHGEL 71

Query: 64  MLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +         E  ++     +D E+ A ++    +   +  +L + +     + + +   
Sbjct: 72  LTALGTAVDREQISFAGPGKRDPELAAAIAAGVVVNVESGDELARLRRIETAVGRSVRFA 131

Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKD----KIESEIKNVNGLMFHNNCENKSFL--- 173
           +  +  +             ++ G   +           + + GL      +N       
Sbjct: 132 LRVNPDFQLSGSGMTMGGGATQFGIDAEAVGEVLRGPGRRGLCGLHIFAGSQNLRLDALT 191

Query: 174 -CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD---------YPVKDFCQRLKEFSE 223
              S   +  ++        +  +++GGG+               Y      +  +    
Sbjct: 192 TGVSQTFELADRLVREHRLDLAHVNIGGGLGIPYFPRDEALDLAAYGRHLAVEVERWRRR 251

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY------QE 277
                + LE G  +V       + V++   +     +V      H             + 
Sbjct: 252 HPDTAVVLELGRYLVGEAGVFVSRVVERKHSRGETFLVVDGGMHHHLAASGNFGQVVRRN 311

Query: 278 SATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN- 332
                    P     T  V G  C   D  G        ++GD +       Y       
Sbjct: 312 YPVSAVTAKPADERETVTVVGPLCTPLDTLGRRVELPRCEVGDLVVVHQSGAYGPTASPV 371

Query: 333 WFNGINMPTIAVK 345
            F G   P   + 
Sbjct: 372 HFLGHPAPVEVLL 384


>gi|221130673|ref|XP_002157770.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 444

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 58/364 (15%), Positives = 106/364 (29%), Gaps = 25/364 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y+ +   ++              V+   A+KC     +   L         +S  E+ 
Sbjct: 45  PFYICNLDDVVRKYWKFQEHL--PQVQPFFAVKCNPDPVIIALLAYLGVNFDCASKGEIK 102

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
              +     E   +    K        +  +       ++   +K K      ++ +R+ 
Sbjct: 103 AVLDLGVDPERIIFANPCKQNSFIKYANEKNVKKMTFDNEAELYKIKQHFPDAELVIRLK 162

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S S               EK  +  +    NV G+ FH          +   +K   
Sbjct: 163 VDDSKSSCQFGIKFGATLESAEKLLNIAKELGLNVIGVSFHVGSGCYDASLYYDAVKLSA 222

Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQ------RLKEFSEKYSVQIYLEPG 234
             F            + +GGG    +      +           K F  + +V+I  EPG
Sbjct: 223 TVFEQAENLGFNFTLLDIGGGFPGVEGGKISFELTASQLNLGIEKFFPPERNVRIIAEPG 282

Query: 235 EAIVTNTTTLNTTVLDIS-----------ENIKNLVIVDSSVEAHVPDYLLY-QESATIY 282
              V +  TL   V  I                    V  S    + D+      +    
Sbjct: 283 RYFVASAFTLTCNVTSIREVSTNKNSPPGFMYYLNDGVYGSFNCILFDHQSPTPLTLHET 342

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
            +   Y   + G +C + D   +  +   + IGD + FE++  Y I     FNG   P +
Sbjct: 343 DHCPRYKCSLWGPTCDSMDCISKDSYLPKLMIGDWLYFENMGAYTIAPSIKFNGF-KPPV 401

Query: 343 AVKN 346
               
Sbjct: 402 VFYM 405


>gi|170046132|ref|XP_001850632.1| ornithine decarboxylase [Culex quinquefasciatus]
 gi|167869005|gb|EDS32388.1| ornithine decarboxylase [Culex quinquefasciatus]
          Length = 433

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 59/372 (15%), Positives = 106/372 (28%), Gaps = 23/372 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +LI+   L+       ++R    V    A+K      +  T      G   +S  E+ 
Sbjct: 37  PLHLIELDNLIK--QHYAWLRHLPRVNPFYAIKSNDEPTIVATSVLLGIGYDCASKSELK 94

Query: 65  LGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                    E   +   A     +     +    +F++  +L K +    +    I  + 
Sbjct: 95  RVLAHGVNSEKIIFAQPAKTIEALKFARESKVRTVFDSEFELKKIQQYYPEAELLIRYKF 154

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           +   S +         P +          +    NV G  F+          F   +K  
Sbjct: 155 DSKNSRATLGTKFGCNPDTEAPHLL-QIAKELGLNVVGWCFNVGSACSDADIFYHAIKKG 213

Query: 183 EKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
            +            ++  LGGG     + Y V       + F+      +  EPG     
Sbjct: 214 RQLCDLAAALGFHFKFFDLGGGFAGDIERYAVHINAALDEFFAIDEECTVIAEPGRYYCA 273

Query: 240 NTTT-----LNTTVLDISENIKNLVIVDSSVEAHVPDYLLY----------QESATIYPN 284
            TT          VL  +E    +  +   +   +                     I  +
Sbjct: 274 ATTINVVSIHGKKVLYNAEVPTQIEHIYYYLNDGLSGTFYGVRSDNDPVNPIAWKKINNS 333

Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344
              Y     G +C  GD FG       + I DR+ F +   Y       FNG  +P   +
Sbjct: 334 QPRYKTTFFGPTCDNGDRFGTGIELPELDISDRLVFPNHGAYTRVYATTFNGFCLPKTVI 393

Query: 345 KNVDGTIKAIRE 356
                + K + +
Sbjct: 394 FIRQSSWKLLEQ 405


>gi|28627544|gb|AAL83709.1| putative ornithine decarboxylase 1 [Capsicum annuum]
          Length = 435

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 52/362 (14%), Positives = 110/362 (30%), Gaps = 26/362 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y++D  ++++ +D          V    A+KC         L         +S  E+ 
Sbjct: 68  PFYVLDLGEVVSLMDQWNVAL--PNVHPFYAVKCNPEPSFLSMLAAMGSNFDCASRAEIE 125

Query: 65  LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                    E   +    K       A     +   +++  ++ K K    K    + ++
Sbjct: 126 YVLSLGISPERIVFANPCKPESDIIFAEKVGVNLTTYDSEDEVYKIKKHHPKCELLLRIK 185

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE----NKSFLCFSA 177
                +    +            E      ++    V+G+ FH        N      +A
Sbjct: 186 PMNDGNARCPMGPKY-GALPEEIEPLLRIAQASRLTVSGVSFHIGSGDADSNAYLGAIAA 244

Query: 178 MLKNIEKEFGHFITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
             +  E      ++++  + +GGG                   + FS +  + I  EPG 
Sbjct: 245 AKQVFETAAKFGMSKMNVLDIGGGFTSGHQFTTAATAVKSALQQHFSNEPELTIIAEPGR 304

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPN------ 284
                  TL TT++                   S+   + D+     +     +      
Sbjct: 305 FFAETAFTLATTIIGKRVRGDLREYWINDGLYGSMNCVLYDHATVTATPLACMSNRVNLN 364

Query: 285 ---TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
              +  + + + G +C A D     +    +++ D + F ++  Y     + FNG N   
Sbjct: 365 CSGSKMFPSTIFGPTCDALDTVLRDYQLPELQVNDWLIFPNMGAYTKAAGSNFNGFNTSA 424

Query: 342 IA 343
           I 
Sbjct: 425 IV 426


>gi|315505294|ref|YP_004084181.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Micromonospora sp. L5]
 gi|315411913|gb|ADU10030.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Micromonospora sp. L5]
          Length = 384

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 49/373 (13%), Positives = 105/373 (28%), Gaps = 32/373 (8%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+YL D   + + +        + GV L  A+K      +   L   +DG   +S  E+
Sbjct: 13  TPFYLYDFAAVRHRVAELRAALPD-GVLLHYAIKANPMPALVQRLAPLVDGLDVASHGEL 71

Query: 64  MLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +         E  ++     +D E+ A ++    +   +  +L + +     + + +   
Sbjct: 72  LTALGTAVDREQISFAGPGKRDPELAAAIAAGVVVNVESGDELARLRRIETAVGRSVRFA 131

Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKD----KIESEIKNVNGLMFHNNCENKSFL--- 173
           +  +  +             ++ G   +           + + GL      +N       
Sbjct: 132 LRVNPDFQLSGSGMTMGGGATQFGIDAEAVGEVLRGPGRRGLCGLHIFAGSQNLRLDALT 191

Query: 174 -CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD---------YPVKDFCQRLKEFSE 223
              S   +  ++        +  +++GGG+               Y      +  +    
Sbjct: 192 TGVSQTFELADRLVREHRLDLAHVNIGGGLGIPYFPRDEALDLAAYGRHLAVEVEQWRRR 251

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY------QE 277
                + LE G  +V       + V++   +     +V      H             + 
Sbjct: 252 HPDTAVVLELGRYLVGEAGVFVSRVVERKHSRGETFLVVDGGMHHHLAASGNFGQVVRRN 311

Query: 278 SATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN- 332
                    P     T  V G  C   D  G        ++GD +       Y       
Sbjct: 312 YPVSAVTAKPADERETVTVVGPLCTPLDTLGRRVELPRCEVGDLVVVHQSGAYGPTASPV 371

Query: 333 WFNGINMPTIAVK 345
            F G   P   + 
Sbjct: 372 HFLGHPAPVEVLL 384


>gi|118384|sp|P27120|DCOR1_XENLA RecName: Full=Ornithine decarboxylase 1; Short=ODC 1; Short=xODC1
 gi|64954|emb|CAA39760.1| ornithine decarboxylase [Xenopus laevis]
          Length = 460

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 60/378 (15%), Positives = 118/378 (31%), Gaps = 42/378 (11%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   ++       + +    V    A+KC     +  TL+    G   +S  E+ L
Sbjct: 40  FYVADFGDIVK--KHVRWFKALPRVTPFYAVKCNDGKAIVKTLSILGAGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        ++C        S++   K      + K+ LRI  
Sbjct: 98  VQSIGVSPERIIYANPCKQVSQIKYAASCGVEKMTFDSEVELMKVARNHPNAKLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++ +    ++ G+ FH          +   + +   
Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELNVDIIGVSFHVGSGCTDPQTYVQAVSDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     V+I  EPG 
Sbjct: 218 VFDMGAELGFNMHLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPADSGVKIIAEPGR 277

Query: 236 AIVTNTTTLNTTVL--------------------------DISENIKNLVIVDSSVEAHV 269
             V ++ TL   ++                           +++ +           AHV
Sbjct: 278 YYVASSFTLAVNIIAKKVMVNEQSGSDDEEDAANDKTLMYYVNDGVYGSFNCILFDHAHV 337

Query: 270 PDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
              L  +           Y++ + G +C   D   E      +++GD + FE++  Y + 
Sbjct: 338 KPVLTKKPKPD----EKFYSSSIWGPTCDGLDRIVERFELPELQVGDWMLFENMGAYTVA 393

Query: 330 RKNWFNGINMPTIAVKNV 347
             + FNG   PT+     
Sbjct: 394 AASTFNGFQRPTLYYVMS 411


>gi|302507226|ref|XP_003015574.1| ornithine decarboxylase, putative [Arthroderma benhamiae CBS
           112371]
 gi|291179142|gb|EFE34929.1| ornithine decarboxylase, putative [Arthroderma benhamiae CBS
           112371]
          Length = 460

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 58/389 (14%), Positives = 107/389 (27%), Gaps = 42/389 (10%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y+ D  ++               VK   A+KC     +   +    +G   +S  E+ 
Sbjct: 73  PFYVADLGEVYRQHIRWKTNLPR--VKPFYAVKCNPNPQVLRLMAVLGNGFDCASKAEID 130

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           L            Y    K        S          +    +K K      ++ LRI 
Sbjct: 131 LALAAGVDPSRIIYAHPCKTKSYLRYASQVGVKQMTFDNTDELYKIKEMFPDAELYLRIL 190

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S S   L+              +       NV G+ FH     +    F   +++  
Sbjct: 191 TDDSASLCRLSMKFGASLSSARPLLELAHGLGLNVVGVSFHVGSGAEDPKSFIKAVQDAR 250

Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
             F         ++ + +GGG      +         L  +   + +++  EPG   V  
Sbjct: 251 FVFDRAAEIGFDLKVLDVGGGFSDDTFEPFAAALGDALDTYFPPH-IRVIAEPGRYYVAT 309

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVP-----DYLLYQESATI-------------- 281
             TL   V+   +      + DS  ++  P               +              
Sbjct: 310 AFTLAANVIARRDVGVEEPLSDSESDSTTPSRASTPSSSGAYMIYLNDGVYGNFSNIVFD 369

Query: 282 -------------YPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYN 327
                           + P    + G +C   D+  E       + +G+ + FE++  Y 
Sbjct: 370 HQHPVAQILTKDDDYTSAPIEYSIWGPTCDGIDVISERVTLNGLLGVGNWLYFENMGAYT 429

Query: 328 INRKNWFNGI--NMPTIAVKNVDGTIKAI 354
                 FNG       I +    G    +
Sbjct: 430 QCSATRFNGFSDKHEVIYIVTEPGAAALL 458


>gi|1781297|emb|CAA71498.1| ornithine decarboxylase [Nicotiana tabacum]
          Length = 433

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 49/362 (13%), Positives = 113/362 (31%), Gaps = 26/362 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y++D  ++++ +D          ++   A+KC         L+        +S  E+ 
Sbjct: 66  PFYVLDLGEVVSLMDQWKSAL--PNIRPFYAVKCNPEPSFLSILSAMGSNFDCASRAEIE 123

Query: 65  LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                    +   +    K       A     +   +++  ++NK +    K    + ++
Sbjct: 124 YVLSLGISPDRIVFANPCKPESDIIFAAKVGVNLTTYDSEDEVNKIRKHHPKSELLLRIK 183

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE----NKSFLCFSA 177
                +    +            +      ++    V+G+ FH        N      +A
Sbjct: 184 PMLDGNARCPMGPKY-GALPEEVDPLLRAAQAARLTVSGVSFHIGSGDADSNAYLGAIAA 242

Query: 178 MLKNIEKEFGHFITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
             +  E      ++++  + +GGG           V       + F ++  + I  EPG 
Sbjct: 243 AKEVFETAAKLGMSKMTVLDVGGGFTSGHQFTTAAVAVKSALKQHFDDEPELTIIAEPGR 302

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESA---------TI 281
                   L TT++      +            S+   + D+     +            
Sbjct: 303 FFAETAFALATTIIGKRVRGELREYWINDGLYGSMNCVLYDHATVNATPLAVLSNRSNVT 362

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
              +  +   V G +C A D     +    +++ D + F ++  Y    ++ FNG N   
Sbjct: 363 CGGSKKFPTTVFGPTCDAFDTVLRDYQLPELQVNDWLVFPNMGAYTKAAESNFNGFNNSA 422

Query: 342 IA 343
           I 
Sbjct: 423 IV 424


>gi|119500932|ref|XP_001267223.1| ornithine decarboxylase [Neosartorya fischeri NRRL 181]
 gi|119415388|gb|EAW25326.1| ornithine decarboxylase [Neosartorya fischeri NRRL 181]
          Length = 453

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 55/360 (15%), Positives = 111/360 (30%), Gaps = 31/360 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D  ++        +      VK   A+KC     +   + +  +G   +S  E+ L
Sbjct: 76  FYVADMGEIYR--QHLRWKMNLGRVKPFYAVKCNPDPEILRLMAKLGNGFDCASKAEIDL 133

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             E         Y    K        +          +    +K KA     ++ LRI  
Sbjct: 134 ALETGIDPSRIIYAQPCKTKSYLRYAAKVGVKQMTFDNADELYKIKACYPDAELYLRILT 193

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S S   L+        +  +  +        V G+ FH     +    F   +++   
Sbjct: 194 DDSTSLCRLSMKFGASLDIARQLLELAHELELKVVGVSFHVGSGAEDPRAFLKAVQDARL 253

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            F        ++  + +GGG      +       + L  +   + +++  EPG   V + 
Sbjct: 254 VFDQAAEVGHELHTLDVGGGFCQDTFEKFAGILSEALDTYFPPH-IRVIAEPGRYYVASA 312

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY------------- 288
            TL   V+   +        + +   ++ D +    S  I+ +  P              
Sbjct: 313 FTLAANVIARRDVRDPEDPANDAYMLYLNDGVYGNFSNIIFDHQHPVAKILTCSGETQPS 372

Query: 289 ----------TAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGI 337
                        + G +C   D+  +       + +GD + FE++  Y       FNG 
Sbjct: 373 ALNAATSEGIAYSIWGPTCDGIDVITQRIVLPGLLDVGDWLYFEEMGAYTKCSATRFNGF 432


>gi|328876086|gb|EGG24450.1| group IV decarboxylase [Dictyostelium fasciculatum]
          Length = 466

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 61/422 (14%), Positives = 110/422 (26%), Gaps = 58/422 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP++L +   +  N    +   +N         A+K      + D L Q   G   SS 
Sbjct: 35  DTPFHLYNGDMIAENARHMIKSFRNHFTHYTNYFAVKATPNPHLLDLLKQQGMGVDCSSF 94

Query: 61  YEVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E++L  +  F G+   +      D E          I  + ++Q++  K          
Sbjct: 95  AELILSQKVGFKGDEIMFTSNNTPDKEYQLAYELGAVINLDDITQIDAMKQALGGEKMPR 154

Query: 119 GLRINPSVSYSKFILADPNRP-FSRLGEKCKDK------IESEIKNVNGLMFHNNCENKS 171
            + +  +    K   A    P  ++ G            +++   +  GL          
Sbjct: 155 MVSLRYNPGPLKQGNAIIGEPQEAKFGLTAAQLPEAYAKLKALGVDRFGLHCMVASNELQ 214

Query: 172 FLCFSAMLKNIEKEFGH-----FITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFS 222
              F    K +                E I+LGGGI        K        QR+    
Sbjct: 215 LDYFEETAKLLFNTVAELSRSPMSLTFEMINLGGGIGIPYRPGQKPVDFVQLAQRIANQY 274

Query: 223 EK-----------------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSV 265
                                ++I  E G  +      L T  +      K  V VD+ +
Sbjct: 275 NNIILPLLSDQQQYVNANIKEIKIVTECGRVVTGPYGCLITKAIHHKSTYKQYVGVDACM 334

Query: 266 EAHVPDYLLYQESATIY-------------PNTGPYTAMVCGRSCLAGDIFGEFHFEKPV 312
              +   +                               + G  C   D F        +
Sbjct: 335 VNLMRPGMYGAYHHITVLKQNNQNNQNNQNNQNNNNLYDIVGSLCENNDKFAVNRSLPNI 394

Query: 313 KIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK--------AIREFSYNDYYN 364
           + GD +   D   +  +    +NG       +                  R  + +D + 
Sbjct: 395 EKGDILVIHDSGAHGHSMGFNYNGKTRSAEYLFTTTNNNNNETKTFTCIRRGETLDDLFT 454

Query: 365 NL 366
            L
Sbjct: 455 TL 456


>gi|195972769|dbj|BAG68504.1| ornithine decarboxylase [Aspergillus oryzae]
          Length = 447

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 52/355 (14%), Positives = 111/355 (31%), Gaps = 26/355 (7%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D  ++        +    + V+   A+KC     +   + +  +G   +S  E+ +
Sbjct: 75  FYVADMGEVYR--QHLRWKMNLSRVRPFYAVKCNPDPEILRLMAKLGNGFDCASKAEIDM 132

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             +         Y    K        +          +    +K KA     ++ LRI  
Sbjct: 133 ALDTGIDPSRIIYAQPCKTKSYLRYAAQMGVKQMTFDNADELYKIKACFPDAELYLRILT 192

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S S   L+        +  +  +        V G+ FH     +    F   +++   
Sbjct: 193 DDSTSLCRLSMKFGASLDIARQLLELAHELELKVVGVSFHVGSGAEDPTAFVKAVQDARM 252

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            F        ++  + +GGG      +       + L  +   + +++  EPG   V   
Sbjct: 253 VFDQAAEIGHELHTLDVGGGFSGDTFEKFAGVLSEALDTYFPPH-IRVIAEPGRYYVATA 311

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY------------- 288
            TL   V+   +        + +   ++ D +    S  I+ +  P              
Sbjct: 312 FTLAANVIARRDVRDPEDPANDAYMIYLNDGVYGNFSNIIFDHQHPVAQILTCANASNAA 371

Query: 289 -----TAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGI 337
                   + G +C   D+  +       + +GD + FE++  Y       FNG 
Sbjct: 372 TSAGIAYSIWGPTCDGIDVISQRITLPGLLDVGDWLFFEEMGAYTKCSATRFNGF 426


>gi|53749692|ref|NP_001005441.1| ornithine decarboxylase 1 [Xenopus (Silurana) tropicalis]
 gi|49257730|gb|AAH74547.1| ornithine decarboxylase 1 [Xenopus (Silurana) tropicalis]
          Length = 460

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 60/374 (16%), Positives = 113/374 (30%), Gaps = 34/374 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   ++       + +    V    A+KC  +  +  TL+    G   +S  E+ L
Sbjct: 40  FYVADLGDIVK--KHVRWFKALPRVTPFYAVKCNDSKAIVKTLSLLGAGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        ++C        S++   K      + K+ LRI  
Sbjct: 98  VQSIGVSSERIIYANPCKQVSQIKYAASCGVEKMTFDSEVELMKVARNHPNAKLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++ +     + G+ FH          +   + +   
Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELNVEIIGVSFHVGSGCTDPQTYVQAVSDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     V I  EPG 
Sbjct: 218 VFDMGAELGFSMHLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPVDSGVTIIAEPGR 277

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY----------------QESA 279
             V +  TL   ++     +      D   +A     L+Y                    
Sbjct: 278 YYVASAFTLAVNIIAKKVMVNEQSGSDDEEDAANDKTLMYYVNDGVYGSFNCILFDHAHV 337

Query: 280 TIYPNTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                  P        + + G +C   D   E      +++GD + FE++  Y +   + 
Sbjct: 338 KPVLTKKPKPDESFYSSSIWGPTCDGLDRIVERFDLPELQVGDWMLFENMGAYTVAASST 397

Query: 334 FNGINMPTIAVKNV 347
           FNG   PT+     
Sbjct: 398 FNGFQRPTLYYVMS 411


>gi|240851013|ref|YP_002972413.1| ornithine decarboxylase [Bartonella grahamii as4aup]
 gi|240268136|gb|ACS51724.1| ornithine decarboxylase [Bartonella grahamii as4aup]
          Length = 377

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 50/357 (14%), Positives = 107/357 (29%), Gaps = 29/357 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   + +N          +  ++  A+K   A  +   L        ++S+ E+ 
Sbjct: 18  PCLIVDLDVVRDNYLNFEKALPQS--RIFYAIKANPAPEILRLLASLGSSFDAASVAEIE 75

Query: 65  LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +        E  ++      +     A          + V ++ K    A        + 
Sbjct: 76  MALKAGATSERISFGNTIKKERDIARAYALGVSLYAVDCVEEVEKIARVAPGARVFCRVL 135

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
            +   +           P   +      +         G+ FH   +      +   L +
Sbjct: 136 TDGKGAEWPLSRKFGCVP--AMAVDVLRRAHQLGLQAYGVSFHVGSQQVDLSAWDRALSD 193

Query: 182 IEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLE 232
               F         +  +++GGG           +          LK+       +  +E
Sbjct: 194 AATVFKRLEQEGISLRLVNMGGGFPTRYLKDVPTEQAYGTAVFDSLKKHFGNRIPETIIE 253

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPN 284
           PG A+V N   + T V+ IS+   N  +          + +   + + + Y    T + +
Sbjct: 254 PGRAMVGNAGVIRTEVVLISKKADNDNVRWVYLDIGKFNGLAETMDEAIRYP-IETPHDD 312

Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337
                 ++ G +C + D+  E   +     + IGD I       Y     +  FNG 
Sbjct: 313 KVMEPCILAGPTCDSADVLYEKTPYPLPLSLTIGDEILIHGTGAYTTTYASVAFNGF 369


>gi|220921641|ref|YP_002496942.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium nodulans ORS 2060]
 gi|219946247|gb|ACL56639.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium nodulans ORS 2060]
          Length = 388

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 44/364 (12%), Positives = 107/364 (29%), Gaps = 33/364 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D + + +N             ++  A+K   A  +   L        ++S+ E+ 
Sbjct: 21  PVMVLDLEVVRDNYAAFARAL--PDTRVFYAVKANPAPEVLGLLASLGSCFDTASVVEIQ 78

Query: 65  LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK---LHKKI 118
           L        +  ++      + C + A+         +  +++ K    A+      + +
Sbjct: 79  LALAAGATADRISFGNTIKKERCIVRALELGVRLFAVDCQAEVEKIARAAETAGVAPEDV 138

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFS 176
            +        +        +              +  + +   G+ FH   +  +   + 
Sbjct: 139 QVFCRILCDGAGAEWPLSRKFGCVPEMAVDVLEHAHRQGLRAYGVSFHVGSQQGNTEAWD 198

Query: 177 AMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSV 227
             L      F         +  ++LGGG                    + L +    +  
Sbjct: 199 GALAASAMIFRECAERGIALSMVNLGGGFPTKYLKEVPGVESYGNAIFRALTKHFGNHMP 258

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENI---------KNLVIVDSSVEAHVPDYLLYQES 278
           +  +EPG  +V N   +   V+ +S+              +     +   + + + Y   
Sbjct: 259 ETIIEPGRGMVGNAGIIEAEVVLVSKKSDAADEVRWVYLDIGKFGGLAETMDESIRYAIR 318

Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-F 334
                       ++ G +C + D+  E   +     + IGD++  E    Y        F
Sbjct: 319 TDH-DEDRKVPCVLAGPTCDSADVLYEKTPYPLPVSLSIGDKVLIEGAGAYTTTYAAVAF 377

Query: 335 NGIN 338
           NG  
Sbjct: 378 NGFP 381


>gi|326470122|gb|EGD94131.1| ornithine decarboxylase [Trichophyton tonsurans CBS 112818]
 gi|326484361|gb|EGE08371.1| ornithine decarboxylase [Trichophyton equinum CBS 127.97]
          Length = 460

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 58/389 (14%), Positives = 107/389 (27%), Gaps = 42/389 (10%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y+ D  ++               VK   A+KC     +   +    +G   +S  E+ 
Sbjct: 73  PFYVADLGEVYRQHIRWKTNLPR--VKPFYAVKCNPNPQVLRLMAVLGNGFDCASKAEID 130

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           L            Y    K        S          +    +K K      ++ LRI 
Sbjct: 131 LALAAGVDPSRIIYAHPCKTKSYLRYASQVGVKQMTFDNTDELYKIKEMCPDAELYLRIL 190

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S S   L+              +       NV G+ FH     +    F   +++  
Sbjct: 191 TDDSASLCRLSMKFGASLSSARPLLELAHGLGLNVVGVSFHVGSGAEDPKSFIKAVQDAR 250

Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
             F         ++ + +GGG      +         L  +   + +++  EPG   V  
Sbjct: 251 FVFDRAAEIGFDLKVLDVGGGFSDDTFEPFAAALGDALDNYFPPH-IRVIAEPGRYYVAT 309

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVP-----DYLLYQESATI-------------- 281
             TL   V+   +      + DS  ++  P               +              
Sbjct: 310 AFTLAANVIARRDVGVEEPLSDSESDSTTPSRASTPSSSGAYMIYLNDGVYGNFSNIVFD 369

Query: 282 -------------YPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYN 327
                           + P    + G +C   D+  E       + +G+ + FE++  Y 
Sbjct: 370 HQHPVAQILTKDDDYASAPIEYSIWGPTCDGIDVISERITLNGLLGVGNWLYFENMGAYT 429

Query: 328 INRKNWFNGI--NMPTIAVKNVDGTIKAI 354
                 FNG       I +    G    +
Sbjct: 430 QCSATRFNGFTDKHEVIYIVTEPGAAALL 458


>gi|298293889|ref|YP_003695828.1| Orn/DAP/Arg decarboxylase 2 [Starkeya novella DSM 506]
 gi|296930400|gb|ADH91209.1| Orn/DAP/Arg decarboxylase 2 [Starkeya novella DSM 506]
          Length = 376

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 45/356 (12%), Positives = 102/356 (28%), Gaps = 27/356 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   + +N             ++  A+K      +   L +       +S+ E++
Sbjct: 17  PCVVVDLDVVRSNYAAFARAL--PDTRVFYAVKANPDPAILSALAELGSCFDCASVNEIL 74

Query: 65  LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +        +  ++      +     A          +  +++ K    A        + 
Sbjct: 75  MALAAGATPDRISFGNTIKKERDVARAFELGVRLFAVDCEAEVEKIARVAAGAKVFCRIL 134

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
            + + +           P         +          G+ FH   + K+   + + L +
Sbjct: 135 CDGAGAEWPLSRKFGCVPEMA--VDVLEHAHRLGLEAYGVSFHVGSQQKNVEAWDSALAS 192

Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLE 232
             + F         +  ++LGGG                    + L         Q  +E
Sbjct: 193 ASQIFRECMERGFSLSLVNLGGGFPAKYLQDVPAAEAYGEAIFRALSRHFGNAIPQTIIE 252

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE-----AHVPDYLLYQESATIYPNTGP 287
           PG  +V     +   V+ IS+   +  +    ++                   + P+ G 
Sbjct: 253 PGRGMVGAAGLIEAEVVLISKKAADDDMRWVYLDIGKFGGLAETMEEAIRYPLVTPHDGD 312

Query: 288 --YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337
                ++ G +C + D+  E         + IGD++  E    Y        FNG 
Sbjct: 313 AMEPCVLAGPTCDSADVMYEKTPVMLPVSLAIGDKVLIEATGAYTTTYSAVAFNGF 368


>gi|121602552|ref|YP_989352.1| pyridoxal-dependent decarboxylase [Bartonella bacilliformis KC583]
 gi|120614729|gb|ABM45330.1| pyridoxal-dependent decarboxylase [Bartonella bacilliformis KC583]
          Length = 377

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 54/357 (15%), Positives = 112/357 (31%), Gaps = 29/357 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   +  N          +  ++  A+K   A  +   L        ++S+ E+ 
Sbjct: 18  PCLVVDLDIVHENYLNFEKALPQS--RIFYAVKANPAPEILRLLVSLGSSFDAASVAEIK 75

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +  E     E  ++    K     A            + + ++ K    A        + 
Sbjct: 76  MILESGATAERISFGNTIKKERDIASAHALGVSLYAVDCIEEVEKVARAAPGARVFCRVL 135

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
            N   +           P   +   C+          +G+ FH   +      +   L +
Sbjct: 136 TNGEGAEWPLSRKFGCVPAMAVDVLCR--AHQLGLQAHGVSFHVGSQQTDLNAWDRALSD 193

Query: 182 IEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLE 232
           +   F        Q++ I++GGG                      LK++      +  +E
Sbjct: 194 VAIVFERLEKEGIQLKLINMGGGFPTRYLHDVPTAQVCGVVIFDSLKKYFGNRIPETIIE 253

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPN 284
           PG A+V N   + T V+ IS+   N  I          + +   + + + Y    T+  +
Sbjct: 254 PGRAMVGNAGVIRTEVVLISKKADNDNIRWVYLDVGKFNGLAETMDEAIRYP-IETMRDD 312

Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337
                 ++ G +C + D+  E   +     + +GD +       Y     +  FNG 
Sbjct: 313 KAMEPCILAGPTCDSADVMYEKSLYLLPLSLTVGDELLIHGTGAYTATYASVAFNGF 369


>gi|307946080|ref|ZP_07661415.1| lysine/ornithine decarboxylase [Roseibium sp. TrichSKD4]
 gi|307769744|gb|EFO28970.1| lysine/ornithine decarboxylase [Roseibium sp. TrichSKD4]
          Length = 376

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 50/365 (13%), Positives = 110/365 (30%), Gaps = 30/365 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   + +N              +  A+K   A  +   L         +S+ E+ 
Sbjct: 17  PCVVVDLDIVRDNYHAFARSL--PDTSVYYAVKANPAPEILSLLESLGSCFDCASVGEIE 74

Query: 65  LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +        +  +Y      +     A          + V +++K    A     ++  R
Sbjct: 75  MVLATGASADRISYGNTIKKEKDIAKAYAYGVRLFAVDCVEEVDKIARSA--PGSRVFCR 132

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +      +++ L+      + +     +          G+ FH   +  +   +   L  
Sbjct: 133 VLCDGIGAEWPLSRKFGCDADMAPDVLEYAHRLGLQAYGVSFHVGSQQANLEAWDLALAM 192

Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTD----KDYPVKDFC--QRLKEFSEKYSVQIYLE 232
               F         ++ +++GGG            P       + L +          +E
Sbjct: 193 AAGVFKEMALRGIDLKMVNMGGGFPTRYLKDVPGVPTYGTAIFEALCKHFGNRLPSTIIE 252

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPN 284
           PG  +V N   +   V+ IS    +  I          S +   + + + Y        +
Sbjct: 253 PGRGMVGNAGMIEAEVVLISRKSADDEIRWVYLDIGKFSGLAETMDEAIRYPIRTPKDGD 312

Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGI-NM 339
                 ++ G +C + D+  E   +     + IGD+I  E    Y        FNG   +
Sbjct: 313 RTA-PCVLAGPTCDSVDVMYEKTPYELPVSLSIGDKILIEACGAYTTTYSTVSFNGFAPL 371

Query: 340 PTIAV 344
            +  +
Sbjct: 372 ASHVI 376


>gi|169773617|ref|XP_001821277.1| ornithine decarboxylase [Aspergillus oryzae RIB40]
 gi|238491624|ref|XP_002377049.1| ornithine decarboxylase [Aspergillus flavus NRRL3357]
 gi|83769138|dbj|BAE59275.1| unnamed protein product [Aspergillus oryzae]
 gi|220697462|gb|EED53803.1| ornithine decarboxylase [Aspergillus flavus NRRL3357]
          Length = 449

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 52/355 (14%), Positives = 111/355 (31%), Gaps = 26/355 (7%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D  ++        +    + V+   A+KC     +   + +  +G   +S  E+ +
Sbjct: 77  FYVADMGEVYR--QHLRWKMNLSRVRPFYAVKCNPDPEILRLMAKLGNGFDCASKAEIDM 134

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             +         Y    K        +          +    +K KA     ++ LRI  
Sbjct: 135 ALDTGIDPSRIIYAQPCKTKSYLRYAAQMGVKQMTFDNADELYKIKACFPDAELYLRILT 194

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S S   L+        +  +  +        V G+ FH     +    F   +++   
Sbjct: 195 DDSTSLCRLSMKFGASLDIARQLLELAHELELKVVGVSFHVGSGAEDPTAFVKAVQDARM 254

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            F        ++  + +GGG      +       + L  +   + +++  EPG   V   
Sbjct: 255 VFDQAAEIGHELHTLDVGGGFSGDTFEKFAGVLSEALDTYFPPH-IRVIAEPGRYYVATA 313

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY------------- 288
            TL   V+   +        + +   ++ D +    S  I+ +  P              
Sbjct: 314 FTLAANVIARRDVRDPEDPANDAYMIYLNDGVYGNFSNIIFDHQHPVAQILTCANASNAA 373

Query: 289 -----TAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGI 337
                   + G +C   D+  +       + +GD + FE++  Y       FNG 
Sbjct: 374 TSAGIAYSIWGPTCDGIDVISQRITLPGLLDVGDWLFFEEMGAYTKCSATRFNGF 428


>gi|159185643|ref|NP_357406.2| ornithine decarboxylase [Agrobacterium tumefaciens str. C58]
 gi|159140777|gb|AAK90191.2| ornithine decarboxylase [Agrobacterium tumefaciens str. C58]
          Length = 377

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 48/367 (13%), Positives = 112/367 (30%), Gaps = 38/367 (10%)

Query: 2   IKT-----PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTT 56
           IKT     P  ++D   + +N +   +        +  A+K   A  +   L        
Sbjct: 10  IKTRRPEGPCLVVDLDVVRDNFNAFRHSL--PNSAIYYAVKANPAPEILKLLASLGSNFD 67

Query: 57  SSSLYEVMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
            +S+ E+ +        +  ++      +     A     D    ++  ++ K    A  
Sbjct: 68  CASVAEIQMALDAGATSDRISFGNTIKKERDVARAHALGIDLFAVDSHEEVEKVARAAPG 127

Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKS 171
                 +  +   +           P   +       + +    +   G+ FH   +  +
Sbjct: 128 ARVFCRVLTDGEGAEWPLSRKFGCVPQMAVDV----LVYAHQMGLESYGVSFHVGSQMMN 183

Query: 172 FLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFS 222
              + A L + ++ F         ++ +++GGG            +   +     L++  
Sbjct: 184 LDAWDAALADAKRVFASLAKQGIHLQMVNMGGGFPTKYLRDVPAAEEYGQAIDTALRKHF 243

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLL 274
                +  +EPG  +V N   +   V+ +S+   N               +   + + + 
Sbjct: 244 GNQIPKTIIEPGRGMVGNAGVIKAEVVLVSKKSDNDNHRWVFLDIGKFGGLAETMDEAIR 303

Query: 275 YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRK 331
           Y        +      ++ G +C + D+  E +       + IGD +  E    Y     
Sbjct: 304 YPIRTERDQDEM-QPCVLAGPTCDSADVLYEKNMYPLPVSLTIGDEVLIEGTGAYTTTYS 362

Query: 332 NW-FNGI 337
              FNG 
Sbjct: 363 AVAFNGF 369


>gi|156847349|ref|XP_001646559.1| hypothetical protein Kpol_1055p58 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117237|gb|EDO18701.1| hypothetical protein Kpol_1055p58 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 455

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 56/364 (15%), Positives = 110/364 (30%), Gaps = 34/364 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  +L           +   V+   A+KC     +  TL+Q       +S  E+  
Sbjct: 78  FFVCDLGELEKLYKNWK--LELPNVQPFYAVKCNPNEKILQTLDQLGINFDCASKSEIDK 135

Query: 66  GHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K           + +     +     K K    + ++ +RI  
Sbjct: 136 VLSMNVDPERIIYANPCKASSFIRYAQTKNVLKSTFDNVEELHKIKKFHPNSELFIRIAT 195

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S ++  L+          E     ++    N+ G+ FH       F      +K+   
Sbjct: 196 DDSTAQCRLSTKYGCELSDVENLLQAVKDLDLNLVGVAFHVGSGASDFTSLYQAVKDSRY 255

Query: 185 EFGHF----ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            F       + +++ + +GGG  F       K     L+E+     V+   EPG   V+ 
Sbjct: 256 VFDKCIEMGLPELKILDIGGGFQFESFHESSKVVRVALEEYFPGDKVKFMAEPGRYFVST 315

Query: 241 TTTLNTTVLD----------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN------ 284
             TL + V+           +  N      ++  +  H             +        
Sbjct: 316 ALTLASNVIAKRTISNNEAMLYINDGVYGNMNCILFDHQEPIPRILYHNNEFHYYDFESS 375

Query: 285 ----------TGPYTAMVCGRSCLAGDIFGEFHFE-KPVKIGDRISFEDVAGYNINRKNW 333
                       P    + G +C   D   + ++    +++GD   F ++  Y       
Sbjct: 376 TNMLKKNDVSKYPQKVSIWGPTCDGLDCITKEYYLKHDLEVGDWFYFPNLGAYTSTAATP 435

Query: 334 FNGI 337
           FNG 
Sbjct: 436 FNGF 439


>gi|302186112|ref|ZP_07262785.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2
           [Pseudomonas syringae pv. syringae 642]
          Length = 402

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 57/385 (14%), Positives = 121/385 (31%), Gaps = 35/385 (9%)

Query: 2   IKT-PY--YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
           ++T P   ++ D   L  ++   +     AGV+L  A+K  +   M +TL   + G   S
Sbjct: 18  LETDPLAAFIYDLDALRQHVSEVMAALP-AGVELYYAIKANSEALMLETLAPLVSGFEIS 76

Query: 59  SLYEVMLGHEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
           S  E+         + + ++     D ++ + L N    I   +++++ + +  A++  +
Sbjct: 77  SGGEIERVMACPTRKPYVFSGPGKLDSDLRSALLNKVEAIHLESLNEIARLQQLAEQAGR 136

Query: 117 KIGLRINPSVS---------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
              + +  +                        + L E  +    +    + G   H   
Sbjct: 137 VQPVFLRINPQLPAAQSSRLAMAGTATPFGIDEAELAEAVRRVDNASHLTLKGFHVHAMS 196

Query: 168 ENKSFLCFSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRL 218
              S      +L    + +  +        Q+   ++GGGI       + +  +  C+ L
Sbjct: 197 HQMSVERHEQLLDFYLQRWQEWKALARDPGQLTHFNVGGGIGVDYLNSQQFDWQRLCRYL 256

Query: 219 KEFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLY 275
           ++   +      L  EPG  I          VLD   +     ++               
Sbjct: 257 EKRLGEQHDAPILRFEPGRFISAYCGYYAIEVLDSKTSHGEHFLICRGGTHQFRLPVAQS 316

Query: 276 QESATIYPNTGPYT-------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
            +   I+    P           + G+ C   D+       K V IGD +       Y  
Sbjct: 317 HDHPVIHLPNTPQNAASSEQAYTIVGQLCTPKDVLSRRQPLKDVNIGDLLVLPLAGAYGY 376

Query: 329 NRKN-WFNGINMPTIAVKNVDGTIK 352
           N  +  F     P+         ++
Sbjct: 377 NISHADFLCHPRPSQHFVRNGERVR 401


>gi|222149795|ref|YP_002550752.1| ornithine decarboxylase [Agrobacterium vitis S4]
 gi|221736777|gb|ACM37740.1| ornithine decarboxylase [Agrobacterium vitis S4]
          Length = 377

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 46/359 (12%), Positives = 106/359 (29%), Gaps = 33/359 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   + +N     +   ++   +  A+K      +   L         +S+ E+ 
Sbjct: 18  PCLVVDLDVVRDNYGAFRHALPDSA--IYYAVKANPEPAILSLLASLGSNFDCASVAEIE 75

Query: 65  LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +        +  ++      +     A     +    ++  ++ K    A        + 
Sbjct: 76  MALAAGATAQRISFGNTIKKERDIAKAHALGINLFAVDSHEEVEKIARAAPGARVFCRVL 135

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179
            +   +           P   +       + +    +   G+ FH   +      + A L
Sbjct: 136 TDGEGAEWPLSRKFGCVPQMAVDV----LVYAHQHGLESFGVSFHVGSQMTKVDAWDAAL 191

Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIY 230
            + ++ F         ++ +++GGG                      LK+       Q  
Sbjct: 192 GDAKRVFAQLAKQGIYLQMVNMGGGFPTKYLRDIPSAEAYGQAINASLKKHFGNNIPQTI 251

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282
           +EPG  +V N   +   V+ IS+   N               +   + + + Y       
Sbjct: 252 IEPGRGMVGNAGVIKAEVVLISKKSDNDAHRWVFLDIGKFGGLAETMDEAIRYPIRTAHD 311

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRKNW-FNGI 337
            +      ++ G +C + D+  E +       + IGD +  E    Y        FNG 
Sbjct: 312 GDEM-EPCVLAGPTCDSADVMYEKNMYPLPLSLTIGDDVLIEGTGAYTTTYSAVAFNGF 369


>gi|6435612|pdb|7ODC|A Chain A, Crystal Structure Ornithine Decarboxylase From Mouse,
           Truncated 37 Residues From The C-Terminus, To 1.6
           Angstrom Resolution
          Length = 424

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 62/373 (16%), Positives = 114/373 (30%), Gaps = 33/373 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       +++    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 40  FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSRAIVSTLAAIGTGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        ++    +    S++   K        K+ LRI  
Sbjct: 98  VQGLGVPAERVIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKAKLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++ +    +V G+ FH          F   + +   
Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPDTFVQAVSDARC 217

Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     V+I  EPG 
Sbjct: 218 VFDMATEVGFSMHLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPSDSGVRIIAEPGR 277

Query: 236 AIVTNTTTLNTTVLDIS-------------------ENIKNLVIVDSSVEAHVPDYLLYQ 276
             V +  TL   ++                              V  S    + D+   +
Sbjct: 278 YYVASAFTLAVNIIAKKTVWKEQPGSDDEDESNEQTFMYYVNDGVYGSFNCILYDHAHVK 337

Query: 277 E--SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                   P+   Y++ + G +C   D   E      + +GD + FE++  Y +   + F
Sbjct: 338 ALLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTF 397

Query: 335 NGINMPTIAVKNV 347
           NG   P I     
Sbjct: 398 NGFQRPNIYYVMS 410


>gi|62858211|ref|NP_001015993.1| arginine decarboxylase [Xenopus (Silurana) tropicalis]
 gi|89271304|emb|CAJ82977.1| ornithine decarboxylase-2 [Xenopus (Silurana) tropicalis]
          Length = 458

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 57/368 (15%), Positives = 117/368 (31%), Gaps = 33/368 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++       +++    VK   A+KC ++ G+   L +   G   +S  E+ L
Sbjct: 39  FFVADLGDVVK--KHLRFLKALPRVKPFYAVKCNSSRGVVKILAELGAGFDCASKTEIEL 96

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             +     E   Y    K        +     +    +++   K      + ++ LRI  
Sbjct: 97  VQDIGVTPERIIYANPCKQISQIKFAAKTGVQMMTFDNEVELSKVSRNHPNARMVLRIAT 156

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S S   L+       +   +  +  ++   +V G+ FH          ++  + +   
Sbjct: 157 DDSKSSARLSVKFGAPLKSCRRLLEMAKNLSVDVIGVSFHVGSGCTDSKAYTQAIADARL 216

Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ------IYLEPGE 235
            F     F   +  + +GGG   T+      +    +   +            I  EPG 
Sbjct: 217 VFEMASEFGYNMWLLDIGGGFPGTEDSKIRFEEMAGVINPALDLYFPEGSDVQIIAEPGR 276

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY---------------QESAT 280
             V +  +L   ++   E +      D        + + Y                    
Sbjct: 277 YYVASAFSLAVNIIAKKEVLMEHSGSDDEENGPNKNIMYYVNDGVYGSFNCLVFDHAHPK 336

Query: 281 IYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
              +  P      YT+ + G +C   D   E        +GD + FE++  Y I   + F
Sbjct: 337 PILHKKPSPDQPLYTSSLWGPTCDGLDQIAENLLLPEHHVGDWLLFENMGAYTIAASSNF 396

Query: 335 NGINMPTI 342
           NG     +
Sbjct: 397 NGFQQSPV 404


>gi|118379|sp|P00860|DCOR_MOUSE RecName: Full=Ornithine decarboxylase; Short=ODC
 gi|53518|emb|CAA30301.1| ornithine decarboxylase [Mus musculus]
 gi|200120|gb|AAA39845.1| ornithine decarboxylase [Mus musculus]
 gi|387500|gb|AAA51638.1| ornithine decarboxylase [Mus musculus]
 gi|387501|gb|AAA39849.1| ornithine decarboxylase [Mus musculus]
 gi|404562|gb|AAB27809.1| ornithine decarboxylase [Mus musculus domesticus]
          Length = 461

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 62/373 (16%), Positives = 114/373 (30%), Gaps = 33/373 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       +++    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 40  FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSRAIVSTLAAIGTGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        ++    +    S++   K        K+ LRI  
Sbjct: 98  VQGLGVPAERVIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKAKLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++ +    +V G+ FH          F   + +   
Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPDTFVQAVSDARC 217

Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     V+I  EPG 
Sbjct: 218 VFDMATEVGFSMHLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPSDSGVRIIAEPGR 277

Query: 236 AIVTNTTTLNTTVLDIS-------------------ENIKNLVIVDSSVEAHVPDYLLYQ 276
             V +  TL   ++                              V  S    + D+   +
Sbjct: 278 YYVASAFTLAVNIIAKKTVWKEQPGSDDEDESNEQTFMYYVNDGVYGSFNCILYDHAHVK 337

Query: 277 E--SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                   P+   Y++ + G +C   D   E      + +GD + FE++  Y +   + F
Sbjct: 338 ALLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTF 397

Query: 335 NGINMPTIAVKNV 347
           NG   P I     
Sbjct: 398 NGFQRPNIYYVMS 410


>gi|300741295|ref|ZP_07071316.1| diaminopimelate decarboxylase [Rothia dentocariosa M567]
 gi|300380480|gb|EFJ77042.1| diaminopimelate decarboxylase [Rothia dentocariosa M567]
          Length = 498

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 53/446 (11%), Positives = 112/446 (25%), Gaps = 84/446 (18%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK------LLLALKCFAAWGMFDTLNQYMDGTT 56
            TP Y+  +              ++A  +      +  A K F    +     +      
Sbjct: 48  DTPQYVFSEDTFRARARGYRQAFEDAFARHGAQVSVYYAGKSFLCTSVARWAYEEGLCLD 107

Query: 57  SSSLYEVMLG-HEKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKA-- 111
           ++S  E+ +    +  G+  A +   K       A+      ++ ++V +L    D    
Sbjct: 108 TASGGELAIALRAQVPGQNIALHGNNKSRGEIARAIKHGVGRVVADSVDELKLIADVHAE 167

Query: 112 -----------QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGE------------KCK 148
                            + +RI P V  S            + G             +  
Sbjct: 168 LNTERAAAGQEPYPAVPVLIRITPGVHASTHESIATAHEDQKFGMSLQPGTARLAGLEAD 227

Query: 149 DKIESEIK-------------------NVNGLMFHNNCENKSFLCFSAMLK----NIEKE 185
           +                          +  G+  H   +      F          +   
Sbjct: 228 ELEYWSTTEDESYAMLAAGILTATDSLDFRGIHCHIGSQIFEAQGFEQAADTALTFMHAV 287

Query: 186 FGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL-----------KEFSEKYSVQIYLEPG 234
              +   +  + LGGG      +       +++                     +  EPG
Sbjct: 288 NQKYGISLPELDLGGGYGIGYTEADTPRSIEQITVSIADAVAATCGRLGMTIPHMSFEPG 347

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDS----------SVEAHVPDYLLYQESATIYPN 284
            +I   +     TV  I                       +  +    L   +      N
Sbjct: 348 RSISGPSGVTLYTVGTIKNVSIEDEHGQIRVRRYVSVDGGMSDNARPVLYDADYMVTLAN 407

Query: 285 TGP----YTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINM 339
             P      + V G+ C +GDI   + +    +  GD ++      Y     + +N ++ 
Sbjct: 408 RAPAGEQVLSRVVGKHCESGDIVVRYCYLPADLCAGDILAVPATGAYCYVLGSNYNYLSR 467

Query: 340 PTIAVKNVDGTIK-AIREFSYNDYYN 364
           P +   +        IR  S ++   
Sbjct: 468 PPVIATSAGEAAHPIIRRQSEDEMLA 493


>gi|291532659|emb|CBL05772.1| diaminopimelate decarboxylase [Megamonas hypermegale ART12/1]
          Length = 354

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 58/347 (16%), Positives = 102/347 (29%), Gaps = 30/347 (8%)

Query: 48  LNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLN 105
           + +   G   SSL E++L       GE            E    +     I  + ++ + 
Sbjct: 1   MQEEGAGADCSSLPELLLADASGIHGEKIMLTSNDTPADEFQKAIELGAIINLDDITHIE 60

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------ 159
             +  A               +  +          ++ G   +  +E+    ++      
Sbjct: 61  YLEKNAGMPQVMS--FRYNPGNLIEGNDIIGKPEEAKYGLTKEQMLEAYKIAMDKGVKRF 118

Query: 160 GLMFHNNCENKSFL----CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
           GL                    +     +       + E+I+LGGGI    +        
Sbjct: 119 GLHTMVISNETRLEGLLLNAKIVFDLAAEIATKLGIKFEFINLGGGIGIPYRPEDNAVDL 178

Query: 216 QRLKEFSEKYSVQIY-----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS 264
           + L E   K   +I             E G AI      L +TVL      +N + +DS 
Sbjct: 179 EALGEGVHKLYDEILVPAGLTTTAIAYESGRAITGPYGYLVSTVLHQKNTYRNYIGLDSC 238

Query: 265 VEAHVPDYLLYQESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
           +   +   L       +              V G  C   D F        + IGDRI  
Sbjct: 239 MANLMRPALYGSYHHIVVVGKENEPCDHVYDVTGSLCENNDKFAIDRKLPKIDIGDRIIM 298

Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
            D   +       +NG       + + DG+++ IR   +  DY+  L
Sbjct: 299 FDTGAHGHAMGFNYNGKLRSAELLLHEDGSVELIRRAETIEDYFATL 345


>gi|227823450|ref|YP_002827423.1| ornithine decarboxylase SpeF [Sinorhizobium fredii NGR234]
 gi|227342452|gb|ACP26670.1| ornithine decarboxylase SpeF [Sinorhizobium fredii NGR234]
          Length = 377

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 48/359 (13%), Positives = 109/359 (30%), Gaps = 33/359 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   + +N     +   ++   +  A+K   A  +   L         +S+ E+ 
Sbjct: 18  PCLVVDLDIVRDNFKAFRHALPDSA--IYYAVKANPAPEILRLLAGLGSNFDCASVAEIE 75

Query: 65  LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +  E        +Y      +     A     +    ++  ++ K    A        + 
Sbjct: 76  MALEAGATPSRISYGNTIKKERDIARAHALGINLFAVDSHEEVEKVARAAPGARVFCRVL 135

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179
            +   +           P   +       + +    +   G+ FH   +      + A L
Sbjct: 136 TDGEGAEWPLSRKFGCVPQMAVDV----LVYAHQLGLVSYGVSFHVGSQMTKLDAWDAAL 191

Query: 180 KNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIY 230
            + ++ FG       +++ +++GGG                      LK+       +  
Sbjct: 192 ADAKRVFGQLDKQGIELKMVNMGGGFPTKYLRDVPSAEAYGQAIFGALKKHFGNNIPETI 251

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282
           +EPG  +V N   +   V+ +S+   N               +   + + + Y       
Sbjct: 252 IEPGRGMVGNAGVIKAEVVLVSKKSDNDSHRWVFLDIGKFGGLAETMDEAIRYPIRTARD 311

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRKNW-FNGI 337
            +      ++ G +C + D+  E +       + IGD +  E    Y        FNG 
Sbjct: 312 ADEM-EPCVLAGPTCDSADVLYEKNMYPLPISLTIGDEVLIEGTGAYTTTYSAVAFNGF 369


>gi|158300908|ref|XP_320710.4| AGAP011805-PA [Anopheles gambiae str. PEST]
 gi|157013386|gb|EAA00421.4| AGAP011805-PA [Anopheles gambiae str. PEST]
          Length = 400

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 65/367 (17%), Positives = 116/367 (31%), Gaps = 26/367 (7%)

Query: 2   IKT--PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           + T  P+Y++D   ++      +   K   V    A+KC     +  TL         +S
Sbjct: 31  LPTDNPFYVMDIGDIVRKHQQWIE--KMPRVVPHYAVKCNDTDLVCATLAALGASFDCAS 88

Query: 60  LYEVMLGHE-KFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
             E+          E   +    K       A  +   T+ +++ ++L+K K        
Sbjct: 89  KGEIAKILSLGVAPERIIFANPMKPASHVRYAASNAVKTMTYDSDTELHKIKQYCPDAKL 148

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF- 175
            I +R     +           P        K    S    V G+ FH       F  + 
Sbjct: 149 VIRIRCEAEKAQCPLGKKFGCDPVEEAPRLIK-IARSLGLEVIGVSFHVGSGCADFPIYY 207

Query: 176 --SAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKYSVQIY 230
              +  +++             + +GGG         D         L  F    +V++ 
Sbjct: 208 KAISYARDLFDYAAQLGYSFSLLDIGGGFPGDTGTSIDEVAMIVNAALDTFFPDKAVRVI 267

Query: 231 LEPGEAIVTNTTTLNTTVLDIS------------ENIKNLVIVDSSVEAHVPDYLLYQES 278
            EPG   V++  TL T V                        V +S  + + D+ + Q  
Sbjct: 268 SEPGRYYVSSAFTLVTNVQSKRVCLNARTGTIDRMMYYLNDGVYASFNSILYDHQVPQPK 327

Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
                    Y + + G +C A D   E      ++I D + FE++  Y I   + FNG  
Sbjct: 328 LIGGQAGKQYKSTLWGPTCDALDQLIETIALPELQIDDWVVFENMGAYTIPVASPFNGFE 387

Query: 339 MPTIAVK 345
           +P +   
Sbjct: 388 LPKVYCY 394


>gi|131888589|ref|NP_038642.2| ornithine decarboxylase [Mus musculus]
 gi|37590522|gb|AAH59826.1| Odc1 protein [Mus musculus]
 gi|52789415|gb|AAH83122.1| Odc1 protein [Mus musculus]
 gi|74137839|dbj|BAE24082.1| unnamed protein product [Mus musculus]
 gi|148666078|gb|EDK98494.1| mCG130699 [Mus musculus]
 gi|189176133|gb|ACD81645.1| ornithine decarboxylase structural 1 [Mus musculus]
          Length = 461

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 62/373 (16%), Positives = 114/373 (30%), Gaps = 33/373 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       +++    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 40  FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSRAIVSTLAAIGTGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        ++    +    S++   K        K+ LRI  
Sbjct: 98  VQGLGVPAERVIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKAKLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++ +    +V G+ FH          F   + +   
Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQAVSDARC 217

Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     V+I  EPG 
Sbjct: 218 VFDMATEVGFSMHLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPSDSGVRIIAEPGR 277

Query: 236 AIVTNTTTLNTTVLDIS-------------------ENIKNLVIVDSSVEAHVPDYLLYQ 276
             V +  TL   ++                              V  S    + D+   +
Sbjct: 278 YYVASAFTLAVNIIAKKTVWKEQPGSDDEDESNEQTFMYYVNDGVYGSFNCILYDHAHVK 337

Query: 277 E--SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                   P+   Y++ + G +C   D   E      + +GD + FE++  Y +   + F
Sbjct: 338 ALLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTF 397

Query: 335 NGINMPTIAVKNV 347
           NG   P I     
Sbjct: 398 NGFQRPNIYYVMS 410


>gi|157117140|ref|XP_001652954.1| ornithine decarboxylase [Aedes aegypti]
 gi|108876155|gb|EAT40380.1| ornithine decarboxylase [Aedes aegypti]
          Length = 432

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 66/376 (17%), Positives = 129/376 (34%), Gaps = 35/376 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P++++D   ++       ++R+   V+   A+KC     + +TL     G   +S  E+ 
Sbjct: 37  PFHVLDLDDVVQ--KHLTWLRQMPRVRPFYAVKCNDDPYILETLACLGTGFDCASKAEIR 94

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                    +   +    K  E            + F++  +L K      +      L 
Sbjct: 95  KVLNLGVEPDRIIFAHPVKSNEALLFAKEKRVTKMTFDSELELEKIAQFYPEAE----LV 150

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK---NVNGLMFHNNCENKSFLCFSAM 178
           +      +  +++   +      E+  + I    K   NV G+ FH  C +K   C+   
Sbjct: 151 LRFRHDSATVLISLGKKFGCNAQEEGPELIRKAKKLGLNVVGVSFHVGCGSKDVDCYYDA 210

Query: 179 LKNIEKEFG---HFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSEKYSVQIYL 231
           +K+ +  F        + + + +GGG           Y         K F  +  +++  
Sbjct: 211 IKSAKSLFDFASSVGYKFKLLDIGGGFPGDSDKKIDGYAEVINQALDKFFPTQSGIEVIA 270

Query: 232 EPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDSSVEAHVPDYLLYQE-------S 278
           EPG   V +   L TT+               +  ++  V   + D++  +         
Sbjct: 271 EPGRYYVGSAVRLFTTIHGKKFVKTDDGENHVMYYINDGVFGTLFDWVSLRAVQDLARVI 330

Query: 279 ATIYPNTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
            +I  +          + G +C + DI  E        IG+ + FE++  Y I     FN
Sbjct: 331 PSITSDKHDKPLLKTTIWGPTCDSTDIVCEDVEFPEHDIGEYMLFENIGAYGITFATSFN 390

Query: 336 GINMPTIAVKNVDGTI 351
           G   PTI V   + T 
Sbjct: 391 GFPSPTIRVYVKEQTW 406


>gi|261205964|ref|XP_002627719.1| ornithine decarboxylase [Ajellomyces dermatitidis SLH14081]
 gi|239592778|gb|EEQ75359.1| ornithine decarboxylase [Ajellomyces dermatitidis SLH14081]
 gi|239611062|gb|EEQ88049.1| ornithine decarboxylase [Ajellomyces dermatitidis ER-3]
 gi|327350693|gb|EGE79550.1| ornithine decarboxylase [Ajellomyces dermatitidis ATCC 18188]
          Length = 450

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 59/358 (16%), Positives = 110/358 (30%), Gaps = 28/358 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y+ D  ++               VK   A+KC     +   + +  +G   +S  E+ 
Sbjct: 71  PFYVADLGQVYRQHIRWKKNLGR--VKPFYAVKCNPDPQVLRLMAKLGNGFDCASKAEID 128

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           L            Y    K        S          +    +K K      ++ LRI 
Sbjct: 129 LALGVGVDPSRIIYAQPCKTKSYLRYASQVGVKQMTFDNSDELYKIKEMCPDAELYLRIL 188

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S S   L+        +     +  +    NV G+ FH     +    F   +++  
Sbjct: 189 TDDSASLCRLSMKFGASLSIARSLLELAKELKLNVVGVSFHVGSGAEDPRSFVKAVEDSR 248

Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
             F         ++ + +GGG      +         L E    + +++  EPG   V +
Sbjct: 249 YVFDQAAEAGFDLKVLDVGGGFSEDTFERFAATLSDALDEHFPPH-IRVIAEPGRYYVAS 307

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAH------VPDYLLYQESATIYPNTGPYT----- 289
             TL   V+   +    +    S+  A       + D +    S  I+ +  P       
Sbjct: 308 AFTLAANVIARRDVSLEMSDSASTDSATEAYMIYLNDGVYGNFSNIIFDHQHPVPQILTM 367

Query: 290 ---------AMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGI 337
                      + G +C   D+  E       + +G+ + FE++  Y       FNG 
Sbjct: 368 GSPVCTPIEYSIWGPTCDGIDLITERTTLPGALDVGNWLYFENMGAYTKCSATRFNGF 425


>gi|158300906|ref|XP_320709.4| AGAP011806-PA [Anopheles gambiae str. PEST]
 gi|157013385|gb|EAA00695.5| AGAP011806-PA [Anopheles gambiae str. PEST]
          Length = 404

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 55/374 (14%), Positives = 108/374 (28%), Gaps = 33/374 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +++D   ++       +  +   VK   A+KC     +  TL     G   +S  E+ 
Sbjct: 37  PLHVLDLDDVVR--KHYGWCAQMPRVKPYYAVKCNDDPRILQTLMTLGTGFDCASKGEME 94

Query: 65  LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                    E+  +    K       A       + F+   +L K      +      L 
Sbjct: 95  RMLGYGVKPESIIFAQPAKSIPSLLYARSKQVSVMTFDGAVELEKIHQYYPEA----RLV 150

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIES---EIKNVNGLMFHNNCENKSFLCFSAM 178
           +       K   +   +       +  + +        NV G+ FH   +      +   
Sbjct: 151 LRMRHDSLKVRCSLGKKFGCDPIAEAPELLRYAATLRMNVIGISFHVGSDCDEHEVYYEA 210

Query: 179 LKNIEKEFGH---FITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFSEKYSVQIYL 231
           +K  +  F +      +   + +GGG    +      Y         + F  +  ++I  
Sbjct: 211 VKIAKGLFEYAKTIGYEFSLLDIGGGFPGDNDKPIDRYAQAVNVAIDQFFPAESDIRIIA 270

Query: 232 EPGEAIVTNTTTLNTTV--------------LDISENIKNLVIVDSSVEAHVPDYLLYQE 277
           EPG   V++  TL + V                          +  +      +      
Sbjct: 271 EPGRYYVSSAVTLVSFVDSKRVMKEKQPDGTEKTRMYYYLNDGIFGTFYCTAHEAQPAIP 330

Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                     +   V G +C   D+         + +GD + FE+   Y       FNG 
Sbjct: 331 IVERKTGAKDFPTSVWGPTCDVMDLILPDVMLPELNVGDSVVFENCGAYGQVLACRFNGF 390

Query: 338 NMPTIAVKNVDGTI 351
            +P +     +GT 
Sbjct: 391 PLPKVIAYLREGTW 404


>gi|254230297|ref|ZP_04923686.1| carboxynorspermidine decarboxylase [Vibrio sp. Ex25]
 gi|151937194|gb|EDN56063.1| carboxynorspermidine decarboxylase [Vibrio sp. Ex25]
          Length = 295

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 123/290 (42%), Positives = 179/290 (61%), Gaps = 3/290 (1%)

Query: 80  AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRP 139
            Y + ++  V   CD +IFN+ SQL  ++   +     IGLR+NP VSY+   LA+P R 
Sbjct: 2   GYSEDDVRDVADICDKMIFNSQSQLAAYRHIVEGKAS-IGLRLNPGVSYAGQDLANPARQ 60

Query: 140 FSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLG 199
           FSRLG +           ++G+MFH NCENK    F  +L  I ++FG ++ +++W+S+G
Sbjct: 61  FSRLGVQADHIKPEIFDGIDGVMFHMNCENKDVDAFIGLLDAISEQFGEYLDKLDWVSMG 120

Query: 200 GGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV 259
           GG+ FT   Y ++     LK FSEK+ VQ+YLEPGEAI+T TT L  TV+DI EN+K   
Sbjct: 121 GGVFFTWPGYDIEKLGLALKAFSEKHGVQMYLEPGEAIITKTTDLVVTVVDIVENVKKTA 180

Query: 260 IVDSSVEAHVPDYLLYQESATIYP--NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDR 317
           IVDS+ EAH  D L+Y E A+I      G +  ++   SCLAGD F   +FE+P++IG R
Sbjct: 181 IVDSATEAHRLDTLIYNEPASILEASENGEHEYVIGSCSCLAGDQFCVANFEQPLEIGQR 240

Query: 318 ISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367
           +   D AGY + + NWFNG+ MP++  +  +G I+ + EF Y+D+  +LS
Sbjct: 241 LHILDSAGYTMVKLNWFNGLRMPSVYCERSNGDIQKLNEFDYSDFKRSLS 290


>gi|293394650|ref|ZP_06638942.1| diaminopimelate decarboxylase [Serratia odorifera DSM 4582]
 gi|291422776|gb|EFE96013.1| diaminopimelate decarboxylase [Serratia odorifera DSM 4582]
          Length = 354

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 52/353 (14%), Positives = 105/353 (29%), Gaps = 39/353 (11%)

Query: 48  LNQYMDGTTSSSLYEVMLGHEKF---GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQ 103
           + Q      S SL EV    +     GG+   +     D    A +S     +   ++  
Sbjct: 1   MRQQGVKVDSVSLGEVERALQAGYQPGGDEIVFTADVLDHATLARVSELKIPVNAGSIDM 60

Query: 104 LNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKN 157
           L +           + LRINP   +      +     S+ G    D       I+     
Sbjct: 61  LEQLGQ--CSAGHPVWLRINPGFGHGHSQKTNTGGENSKHGIWYADLPKAVEKIQRYGLT 118

Query: 158 VNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR 217
           + G+  H       +     +   + ++       I  IS GGG+    +        + 
Sbjct: 119 LLGVHMHIGSGVD-YQHLERVCDAMVQQVIDLGQDIAAISAGGGLSIPYQHGEEAIDTEH 177

Query: 218 LKEFSEK----------YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVE 266
                ++          + V + +EPG  ++     L   V  +     ++ V+VD+   
Sbjct: 178 YFGLWDRARQRIAAHLGHPVALEIEPGRFLMAEAGVLVAEVRAVKDMGSRHFVLVDAGFN 237

Query: 267 AHVPDYLLYQESATIYPNTGPYTA--------MVCGRSCLAGDIF-------GEFHFEKP 311
             +   +                         ++ G  C +GD+F        E      
Sbjct: 238 DLMRPAMYGSYHHISLLPADGRDTAGQPLRDTVIAGPLCESGDVFTQQAGGGVETRALPA 297

Query: 312 VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           V++GD + F D   Y  +  + +N   +    +          R  + ++   
Sbjct: 298 VQVGDYLVFHDTGAYGSSMSSNYNSRPLLPEVLFENGEARLIRRRQTIDELIA 350


>gi|329945379|ref|ZP_08293142.1| diaminopimelate decarboxylase [Actinomyces sp. oral taxon 170 str.
           F0386]
 gi|328529001|gb|EGF55932.1| diaminopimelate decarboxylase [Actinomyces sp. oral taxon 170 str.
           F0386]
          Length = 486

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 57/430 (13%), Positives = 122/430 (28%), Gaps = 68/430 (15%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMDG 54
            +P +++D+  L     +                G +   A K F    +   + Q   G
Sbjct: 54  PSPVFVLDEADLRGRAASWSAAMAEEFWSGYGLRGGEAFYAGKAFLTTQVARIVLQEGMG 113

Query: 55  TTSSSLYEVMLGHEKF----GGETHAY--------NVAYKDCEIDAVLSNCDTIIFNTVS 102
             ++S  E+ +G        G E   +        N         AV      ++ ++  
Sbjct: 114 IDTASRVELAVGLTGLEKVDGPEATTHARRLGLHGNGKTPAEVTTAVRHRVGHLVIDSPE 173

Query: 103 QLNKFKDKAQKLHK----------KIGLRINPSVSYSKFILADPNRPFSRLGE------- 145
           +++       +L +          ++ +R+   +               + G        
Sbjct: 174 EVDHAVAAVHELRRSGDFGADERARVMVRLTTGIHAGGHEYISTAHEDQKFGLSVSTGAA 233

Query: 146 --KCKDKIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLG 199
                  + ++   + GL  H   +      F      +L    +           + LG
Sbjct: 234 RRTIDAIVAADELELAGLHSHIGSQILDMAGFREAVGVVLGLRHEIAVDTGHLCPEVDLG 293

Query: 200 GGIHFTDKDYPVKDF---------CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTT 247
           GG                       + ++E  E+       + +EPG A+   TT    T
Sbjct: 294 GGYGIAYTGADPVAPSPAQVARTLAEAVRETCERLGDEVPTVSIEPGRAVAGPTTVTLYT 353

Query: 248 VLDISENI------KNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT------AMVCGR 295
           V  +          +  V +D  +  ++   L       +  N  P        A V G+
Sbjct: 354 VTGLKRVELGEGASRLYVSIDGGMSDNIRPALYEAAYTALVANRRPDPSAGLTRARVVGK 413

Query: 296 SCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            C +GD+          + +GD ++      Y  +  + +N    P +       +   +
Sbjct: 414 HCESGDVVVRDVDLPADLAVGDVLAVPATGAYGRSMASSYNLFTRPGVRWVREGESGWIL 473

Query: 355 REFSYNDYYN 364
           R  +  D   
Sbjct: 474 RPETIEDLLR 483


>gi|75277325|sp|O22616|DCOR_SOLLC RecName: Full=Ornithine decarboxylase; Short=ODC; AltName:
           Full=LeODC
 gi|3668354|gb|AAC61845.1| ornithine decarboxylase [Solanum lycopersicum]
 gi|10937976|gb|AAB82301.2| ornithine decarboxylase [Solanum lycopersicum]
          Length = 431

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 47/362 (12%), Positives = 110/362 (30%), Gaps = 26/362 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y++D  ++++ ++          ++   A+KC         L+        +S  E+ 
Sbjct: 64  PFYVLDLGEVVSLMEQWNSAL--PNIRPFYAVKCNPEPSFLSMLSAMGSNFDCASRAEIE 121

Query: 65  LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                    +   +    K       A     +   +++  ++ K +    K    + ++
Sbjct: 122 YVLSHGISPDRIVFANPCKPESDIIFAEKIGVNLTTYDSEDEVYKIRKHHPKCELLLRIK 181

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE----NKSFLCFSA 177
                +    +          +    +   ++    V+G+ FH        N      +A
Sbjct: 182 PMTDGNARCPMGPKYGALPEEIEPLLRTA-QAARLTVSGVSFHIGSGDADSNAYLGAIAA 240

Query: 178 MLKNIEKEFGHFITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
             +  E      + ++  + +GGG                     F +   + I  EPG 
Sbjct: 241 AKQVFETAAQLGMPKMTVLDIGGGFTSGHQFTTAAPAVKSALETHFHDFPELTIIAEPGR 300

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPD---------YLLYQESATI 281
                  TL TT++      +            S+   + D           +   +   
Sbjct: 301 FFAETAFTLATTIIGKRVRGELKEYWINDGLYGSMNCVLYDHATVTATPLACMSNRNNLN 360

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
              +  + + V G +C A D     +    +++ D + F ++  Y     + FNG N   
Sbjct: 361 CGGSKTFPSTVFGPTCDALDTVLRDYQLPELQVNDWLIFPNMGAYTKAAGSNFNGFNTSA 420

Query: 342 IA 343
           I 
Sbjct: 421 IV 422


>gi|209550966|ref|YP_002282883.1| Orn/DAP/Arg decarboxylase 2 [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209536722|gb|ACI56657.1| Orn/DAP/Arg decarboxylase 2 [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 377

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 47/359 (13%), Positives = 106/359 (29%), Gaps = 33/359 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   + +N     +   ++   +  A+K   A  +   L         +S+ E+ 
Sbjct: 18  PCLVVDLDVISDNFHAFRHAMPDSA--IYYAVKANPAPEVLKLLAGLGSNFDCASVAEIE 75

Query: 65  LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +  E        ++      +     A          ++  ++ K    A        + 
Sbjct: 76  MALEAGATAARISFGNTIKKERDVARAHALGVSLFAVDSHEEVEKISRAAPGARVFCRVL 135

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV--NGLMFHNNCENKSFLCFSAML 179
            +   +           P   +       + +    +   G+ FH   +      + + L
Sbjct: 136 TDGEGAEWPLSRKFGCVPQMAVDV----LVYAHQLGLLSYGVSFHVGSQMTKVDAWDSAL 191

Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIY 230
            + ++ F         ++ +++GGG                    Q L+        Q  
Sbjct: 192 ADAKRVFVSLAKQGIHLQMVNMGGGFPTKYLRDVPSAEAYGKSIYQALRTHFGNQIPQTI 251

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282
           +EPG  +V N   +   V+ IS+   N               +   + + + Y       
Sbjct: 252 IEPGRGMVGNAGVIKAEVVLISKKSDNDDARWVFLDIGKFGGLAETMDEAIRYPIRTEHD 311

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRKNW-FNGI 337
            +      ++ G +C + D+  E +       + IGD +  E    Y        FNG 
Sbjct: 312 GDEM-EPCVIAGPTCDSADVLYEKNLYPLPISLSIGDEVLIEGTGAYTTTYSAVAFNGF 369


>gi|119485611|ref|ZP_01619886.1| Orn/DAP/Arg decarboxylase 2 [Lyngbya sp. PCC 8106]
 gi|119456936|gb|EAW38063.1| Orn/DAP/Arg decarboxylase 2 [Lyngbya sp. PCC 8106]
          Length = 423

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 70/407 (17%), Positives = 122/407 (29%), Gaps = 52/407 (12%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE 68
            +  K+                 +L  LK  +   +   L Q   G   SS  E+    +
Sbjct: 2   YNLNKISRQYSKLRDYLP-PNFNILYTLKANSNLTICHRLAQLGCGADISSTGELKAALK 60

Query: 69  -KFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPS 125
             F      +    K       A+ +    I+  ++++  +  + AQK  KK  + I  +
Sbjct: 61  TGFSAPQIVFTGPGKTNSELAAAIEAGIGIIVLESINEARRLNNLAQKYGKKQDVLIRIN 120

Query: 126 VSYSKFILADPNRP-------------------------------FSRLGEKCKDKIESE 154
             Y      +                                    ++  E+       E
Sbjct: 121 PLYRTNQSCEIREKASSCGANDTNSVQPSLTIQTIASSSSKFGVDENKAIEEIAAINSLE 180

Query: 155 IKNVNGLMFHNNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTD----K 207
             N+ G+          +    A   N      +       I  +  GGGI         
Sbjct: 181 NLNLKGIHIFTESNVLDYQQLLASWTNTISIANKINDQGYHISLLDFGGGIGIPYNTVDP 240

Query: 208 DYPVKDFCQRLKEFSE--KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSV 265
           ++ ++ F + L+   E   YS    +E G  +V       T V+DI E++    I+    
Sbjct: 241 EFDMESFGKELQRIFENNPYSYHCIVEIGRYLVGEAGCYITEVVDIKESLGQKFIILDGG 300

Query: 266 EA--HVPDYLLYQESATIYPNTGPYT--AMVCGRSCLAGDIFGEFHFEKP-VKIGDRISF 320
                        +   +    G YT  A + G+     DI  E       ++IGDR+  
Sbjct: 301 VHQLLRLSMKPASKYMEVLGKNGNYTQKATLGGKLPTPLDIMVEDVMVPEDIEIGDRLVI 360

Query: 321 EDVAGYNINRK-NWFNGINMPTIAVKNVDGTIKAIREFS-YNDYYNN 365
            +   Y  N     F   N P       DG ++ IRE     D++ N
Sbjct: 361 YNCGAYGFNHSLTNFALHNYPAEVAY-SDGEMELIREPGKIEDFFLN 406


>gi|239944440|ref|ZP_04696377.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces roseosporus NRRL 15998]
 gi|239990897|ref|ZP_04711561.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces roseosporus NRRL 11379]
 gi|291447906|ref|ZP_06587296.1| orn/DAP/Arg decarboxylase 2 [Streptomyces roseosporus NRRL 15998]
 gi|291350853|gb|EFE77757.1| orn/DAP/Arg decarboxylase 2 [Streptomyces roseosporus NRRL 15998]
          Length = 434

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 54/402 (13%), Positives = 109/402 (27%), Gaps = 40/402 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D + L + +           +++  +LK      +F  L +       SSL E
Sbjct: 16  GTPLYVYDGEVLTDTVTELRSALH-PALEVFYSLKSNPNISVFRVLRRGGARAEVSSLVE 74

Query: 63  VMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIG 119
           +           +           E+ A L      ++  +  +L+  +  A     +  
Sbjct: 75  LRTALAAGAKPEDVIFLGPGKSAEELGACLDVGVYAVVVESFDELDHLERLAGDRGVRQR 134

Query: 120 LRINPSV-SYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCENKS 171
           + +  +                 + G   K  +++          +V G+  +       
Sbjct: 135 VLLRINPACAISGSRLTMGGKPRQFGIDEKAVLDAGDLPSRYRHADVAGIHVYMGTRILD 194

Query: 172 FL----CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
                   +  L   E+       +++ + +GGG+         D  + D  + L    E
Sbjct: 195 AEVLGKNTAYALDLAERVVRSTGIRLDAVDIGGGMGVAYFDGESDLDLADVVKELNPRIE 254

Query: 224 KYS-----VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH---------- 268
           K++      ++ LE G  +     T    V  + E++     V      H          
Sbjct: 255 KFATAHPGTRLILESGRFLSARAGTYVLGVRYVKESLGESFAVADGGTHHHMAAVGIGSF 314

Query: 269 ----VPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
                P  LL ++              V G  C   D   +      ++ GD I      
Sbjct: 315 VKRNFPAVLLGRDGEERTRTGPISPQNVTGPLCTPNDTLLKQAQLPDLRPGDLIGVARSG 374

Query: 325 GYNINRKNW-FNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            Y        F     P   +               +D    
Sbjct: 375 AYGPTASPGLFLSHGYPAEVLVTEGRAHLVRSRDEPDDLMRK 416


>gi|319404654|emb|CBI78256.1| lysine/ornithine decarboxylase [Bartonella rochalimae ATCC
           BAA-1498]
 gi|319404673|emb|CBI78275.1| lysine/ornithine decarboxylase [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 377

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 51/359 (14%), Positives = 109/359 (30%), Gaps = 33/359 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   +  N          +  ++  A+K   A  +   L        ++S+ E+ 
Sbjct: 18  PCLVVDLDVVHENYLNFEKALPQS--RIFYAIKANPAPEILRLLVSLGSFFDAASVAEIE 75

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +           ++    K     A            +   ++ K    A        + 
Sbjct: 76  MALAAGATANRISFGNTIKKERDIARAHALGISLYAIDCFEEVEKVARAAPGARVFCRVL 135

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV--NGLMFHNNCENKSFLCFSAML 179
            +   +           P   +         +    +  +G+ FH   +      +   L
Sbjct: 136 TDGEGAEWPLSQKFGCVPSMAVDV----LRYAHHLGLQAHGVSFHVGSQQTDLNAWDRAL 191

Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIY 230
            +    F        Q++ +++GGG                      LK++      +  
Sbjct: 192 SDTAFVFKSLEQEGIQLQLVNMGGGFPTRYLKDIPTVQTYGMSIFDALKKYFGNRIPETI 251

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282
           +EPG A+V N   + T V+ IS+  KN  +          + +   + + + Y    T +
Sbjct: 252 IEPGRAMVGNAGVIRTEVVLISKKGKNDNVRWVYLDIGKFNGLTETMDEAIRYP-IETAH 310

Query: 283 PNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337
            +      ++ G +C + DI  E   +     + IGD +       Y     +  FNG 
Sbjct: 311 DDQAMEPCILAGPTCDSADIMYEKTPYLLPLSLTIGDELLIHGTGAYTTTYASVAFNGF 369


>gi|23273123|gb|AAH33264.1| Odc1 protein [Mus musculus]
          Length = 456

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 62/373 (16%), Positives = 114/373 (30%), Gaps = 33/373 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       +++    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 40  FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSRAIVSTLAAIGTGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        ++    +    S++   K        K+ LRI  
Sbjct: 98  VQGLGVPAERVIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKAKLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++ +    +V G+ FH          F   + +   
Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQAVSDARC 217

Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     V+I  EPG 
Sbjct: 218 VFDMATEVGFSMHLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPSDSGVRIIAEPGR 277

Query: 236 AIVTNTTTLNTTVLDIS-------------------ENIKNLVIVDSSVEAHVPDYLLYQ 276
             V +  TL   ++                              V  S    + D+   +
Sbjct: 278 YYVASAFTLAVNIIAKKTVWKEQPGSDDEDESNEQTFMYYVNDGVYGSFNCILYDHAHVK 337

Query: 277 E--SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                   P+   Y++ + G +C   D   E      + +GD + FE++  Y +   + F
Sbjct: 338 ALLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTF 397

Query: 335 NGINMPTIAVKNV 347
           NG   P I     
Sbjct: 398 NGFQRPNIYYVMS 410


>gi|6573548|pdb|2TOD|A Chain A, Ornithine Decarboxylase From Trypanosoma Brucei K69a
           Mutant In Complex With Alpha-Difluoromethylornithine
 gi|6573549|pdb|2TOD|B Chain B, Ornithine Decarboxylase From Trypanosoma Brucei K69a
           Mutant In Complex With Alpha-Difluoromethylornithine
 gi|6573550|pdb|2TOD|C Chain C, Ornithine Decarboxylase From Trypanosoma Brucei K69a
           Mutant In Complex With Alpha-Difluoromethylornithine
 gi|6573551|pdb|2TOD|D Chain D, Ornithine Decarboxylase From Trypanosoma Brucei K69a
           Mutant In Complex With Alpha-Difluoromethylornithine
          Length = 425

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 66/383 (17%), Positives = 117/383 (30%), Gaps = 33/383 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+++ D   ++   +T         V    A+ C   W +  TL     G   +S  E+ 
Sbjct: 39  PFFVADLGDIVRKHETWKKCLPR--VTPFYAVACNDDWRVLGTLAALGTGFDCASNTEIQ 96

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                    E   Y    K         +    +          K        K+ LRI+
Sbjct: 97  RVRGIGVPPEKIIYANPCKQISHIRYARDSGVDVMTFDCVDELEKVAKTHPKAKMVLRIS 156

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S ++  L+              ++ +    +V G+ FH    +     F+  + +  
Sbjct: 157 TDDSLARCRLSVKFGAKVEDCRFILEQAKKLNIDVTGVSFHVGSGSTDASTFAQAISDSR 216

Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRL------KEFSEKYSVQIYLEPG 234
             F         +  + +GGG   T       +    +      K F     + I  EPG
Sbjct: 217 FVFDMGTELGFNMHILDIGGGFPGTRDAPLKFEEIAGVINNALEKHFPPDLKLTIVAEPG 276

Query: 235 EAIVTNTTTLNTTVLDIS-------------------ENIKNLVIVDSSVEAHVPDYLLY 275
              V +  TL   V+                              V  S    + D+ + 
Sbjct: 277 RYYVASAFTLAVNVIAKKVTPGVQTDVGAHAESNAQSFMYYVNDGVYGSFNCILYDHAVV 336

Query: 276 QESATI--YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
           +        PN   Y + V G +C   D   E ++   +++G+ + FED+  Y +   + 
Sbjct: 337 RPLPQREPIPNEKLYPSSVWGPTCDGLDQIVERYYLPEMQVGEWLLFEDMGAYTVVGTSS 396

Query: 334 FNGINMPTIAVKNVDGTIKAIRE 356
           FNG   PTI           +RE
Sbjct: 397 FNGFQSPTIYYVVSGLPDHVVRE 419


>gi|322787419|gb|EFZ13507.1| hypothetical protein SINV_03783 [Solenopsis invicta]
          Length = 394

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 56/357 (15%), Positives = 112/357 (31%), Gaps = 23/357 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y++D   ++N         K   V    A+KC     +   L     G   +S  E+  
Sbjct: 35  FYIVDLGDIINKHREWTT--KIPRVTPHYAVKCNPDPNVIKILAALNAGFDCASEQEIRE 92

Query: 66  GHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
             +     +   +   YK       A   N D I  ++  +L K KD   +    I +R 
Sbjct: 93  VMQYGVQADRIIFANPYKSPSHIKYAKKMNVDQITVDSEIELLKIKDLYPEAKIVIRIRC 152

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS----AM 178
           +   S     L       +    +           ++G  FH          +S      
Sbjct: 153 DAKDSDVDLGLKFGC-ESNDDAVRLIQLTMDLGLTLHGFSFHPGSPCWELNAYSRGIGFC 211

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV--QIYLEPGEA 236
            + I          ++ I +GGG         +      + +  +      +I  EPG  
Sbjct: 212 RQLIAIAKSMGCKDVQLIDIGGGFPGKRGT-NIDKLASIINDAIQDLDPSIRIISEPGRY 270

Query: 237 IVTNTTTLNTTVLDISEN------IKNLVIVDSSVEAHVPDY----LLYQESATIYPNTG 286
            V +  TL + +            ++       +  + + +         ++     +  
Sbjct: 271 YVDSAFTLASYLHSKKTAFKNGKFMRMYYTNVGTYNSFIDELLGLKSRVPQTVFGPMSGE 330

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343
            + + V G +C + D+  +      + IGD + + DV  Y +     FNG  +P + 
Sbjct: 331 KFPSTVWGPTCDSYDVIVKDALLPELHIGDWLVWNDVGAYTLCLCTTFNGFPIPKVV 387


>gi|319407636|emb|CBI81285.1| lysine/ornithine decarboxylase [Bartonella sp. 1-1C]
          Length = 377

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 52/359 (14%), Positives = 109/359 (30%), Gaps = 33/359 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   +  N          +  ++  A+K   A  +   L        ++S+ E+ 
Sbjct: 18  PCLVVDLDVVHENYLNFEKALPQS--RIFYAIKANPAPEILRLLVSLGSSFDAASVAEIE 75

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +           ++    K     A            +   ++ K    A        + 
Sbjct: 76  MALAAGATANRISFGNTIKKERDIARAHALGISLYAVDCFEEVEKVARAAPGARVFCRVL 135

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV--NGLMFHNNCENKSFLCFSAML 179
            +   +           P   +         +    +  +G+ FH   +      +   L
Sbjct: 136 TDGEGAEWPLSQKFGCVPSMAVDV----LRYAHHLGLQAHGVSFHVGSQQTDLNAWDRAL 191

Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIY 230
            +    F        Q++ +++GGG                      LK++      +  
Sbjct: 192 SDTAFVFKSLEQEGIQLQLVNMGGGFPTRYLKDIPTVQTYGMAIFDSLKKYFGNRIPETI 251

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282
           +EPG A+V N   + T V+ IS+  KN  +          + +   + + + Y    T Y
Sbjct: 252 IEPGRAMVGNAGVIRTEVVLISKKGKNDNVRWVYLDIGKFNGLTETMDEAIRYP-IETAY 310

Query: 283 PNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337
            +      ++ G +C + DI  E   +     + IGD +       Y     +  FNG 
Sbjct: 311 DDKAMEPCILAGPTCDSADIMYEKTPYLLPLSLTIGDELLIHGTGAYTTTYASVAFNGF 369


>gi|254699413|ref|ZP_05161241.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella suis bv. 5 str. 513]
 gi|261749863|ref|ZP_05993572.1| orn/DAP/Arg decarboxylase 2 [Brucella suis bv. 5 str. 513]
 gi|261739616|gb|EEY27542.1| orn/DAP/Arg decarboxylase 2 [Brucella suis bv. 5 str. 513]
          Length = 377

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 51/357 (14%), Positives = 112/357 (31%), Gaps = 29/357 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   +  N          +  ++  A+K   A  +   L        ++S+ E+ 
Sbjct: 18  PCLVVDTDVVRENYQGFEKALPYS--RIFYAVKANPAPEILRLLASLGSSFDTASVAEIE 75

Query: 65  LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +  E     +  +Y      +     A          + V ++ K    A     ++  R
Sbjct: 76  MALEAGATPDRISYGNTIKKERDIARAFDLGIRLYAVDCVEEVEKIARVA--PGSRVFCR 133

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +      +++ L+        + +    + ++   +  G+ FH   +      +   L +
Sbjct: 134 VLTDGEGAEWPLSRKFGCVPAMAKDVLRRAKALGLDAYGVSFHVGSQQTDLTAWDRALAD 193

Query: 182 IEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLE 232
               F         +  +++GGG                      L         +  +E
Sbjct: 194 AAAVFRTLADEGIILRMVNMGGGFPTRYLKDVPTAQAYGMAIFDALSRHFGNRIPETIIE 253

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPN 284
           PG  +V N   + T V+ +S    N  +    ++          + + + YQ   T +  
Sbjct: 254 PGRGMVGNAGVIKTEVVLVSRKADNDNMRWVYLDIGKFGGLAETMDEAIRYQ-IVTPHDG 312

Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337
           +     ++ G +C + D+  E   +     + IGD I  E    Y        FNG 
Sbjct: 313 SETEPCVLAGPTCDSADVLYEKTPYPLPVSLTIGDEILIEGTGAYTTTYSAVAFNGF 369


>gi|13472621|ref|NP_104188.1| ornithine decarboxylase [Mesorhizobium loti MAFF303099]
 gi|14023367|dbj|BAB49974.1| ornithine decarboxylase [Mesorhizobium loti MAFF303099]
          Length = 377

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 47/359 (13%), Positives = 106/359 (29%), Gaps = 33/359 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   + +N             K+  A+K   A  +   L        ++S+ EV 
Sbjct: 18  PCLVVDLDVVRDNFRAFEKAL--PDSKIYYAVKANPAPEILRLLAAMGSSFDTASVAEVE 75

Query: 65  LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +        +  ++      +     A          + V ++ K    A        + 
Sbjct: 76  MAMDAGAPADRISFGNTIKKERDIARAYQLGIRLFAVDCVEEVEKIARVAPGARVFCRVL 135

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179
            +   +          +              ++   ++  G+ FH   +      +   L
Sbjct: 136 TDGEGAEW----PLSRKFGCVPAMAVDVLRHAKGLGLDAYGVSFHVGSQQTDLTAWDRAL 191

Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIY 230
            + +K F         ++ +++GGG                      L++       +  
Sbjct: 192 ADAKKVFATLAEEGIVLKMVNMGGGFPTRYLRDVPAAQAYGQAIFSALRKHFGNAIPETI 251

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282
           +EPG  +V N   + + V+ IS+   N  +            +   + + + Y       
Sbjct: 252 IEPGRGMVGNAGVIKSEVVLISKKADNDNVRWVFLDIGKFGGLAETMDEAIRYPLVTRHD 311

Query: 283 PNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337
            +      ++ G +C + D+  E   +     + IGD +  E    Y        FNG 
Sbjct: 312 GSETA-PCVLAGPTCDSADVMYEKTPYPLPLSLTIGDEVLIEGTGAYTTTYSAVAFNGF 369


>gi|330468944|ref|YP_004406687.1| diaminopimelate decarboxylase [Verrucosispora maris AB-18-032]
 gi|328811915|gb|AEB46087.1| diaminopimelate decarboxylase [Verrucosispora maris AB-18-032]
          Length = 422

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 57/392 (14%), Positives = 107/392 (27%), Gaps = 35/392 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D   + +             V++  +LK      +   L+        SSL E
Sbjct: 20  GTPLYVYDGATITDRYQQLRERLH-PAVRMFYSLKANPNISVCALLHSLGASAEVSSLTE 78

Query: 63  VMLG-HEKFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           ++         E   +        E+ A L    T+I  ++ +L    + A +L     +
Sbjct: 79  LVTAERAGVPAEDIMFLGPGKSRTELTACLKGEVTLICESLGELALIDELAAELGTTARV 138

Query: 121 RINPSVS-YSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNN----CE 168
            +  + S   K           + G      +             + G   +       E
Sbjct: 139 VLRVNPSFAVKGSGLTMGGKPRQFGIDEAALLAESDLAGRHPSVRLCGFQAYLGTRFLSE 198

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
                  + +L   E+   H    +E + +GGG+               L +        
Sbjct: 199 AMIVENTARILDLAERLSQHLAVDLEVVDVGGGLGVAYFAGEQDLDVAALTDQLNPVFAA 258

Query: 229 IY---------LEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQES 278
            +         +E G  +V ++ T    V  + E++ +   + D     H+    +    
Sbjct: 259 FHARHPRTVLVMELGRYLVGHSGTYAVQVRYVKESMGERFAVADGGTNHHMAAVGIGSFV 318

Query: 279 ATIYPN--------TGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNIN 329
              +P           P    V G  C   D  G+       V+ GD I  E    Y   
Sbjct: 319 KRNFPMRLLNRDSTAEPVKWNVTGPLCTPNDTIGKAVELPADVRPGDVIGVERSGAYGPT 378

Query: 330 RKN-WFNGINMPTIAVKNVDGTIKAIREFSYN 360
                F     P   + +              
Sbjct: 379 ASPVHFLSHGYPAEVLIHEGEPRLVRTRDDVE 410


>gi|195383336|ref|XP_002050382.1| GJ22122 [Drosophila virilis]
 gi|194145179|gb|EDW61575.1| GJ22122 [Drosophila virilis]
          Length = 392

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 55/356 (15%), Positives = 106/356 (29%), Gaps = 23/356 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
             + D   +          ++   +K   A+KC     +  TL     G   +S  E+ L
Sbjct: 31  LNICDLSSVERKFRLWQ--QQLPRIKPYYAVKCNDDSRIVQTLAGLGVGFDCASKNELKL 88

Query: 66  GHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             +     E   +    +             +     ++   +K      +  + +R   
Sbjct: 89  VLDCDVSPERIIFANPCRPISHLDYAKQRQVLKGTVDNEFEIYKLHKHYPNSNLIVRFKS 148

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKI-ESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
               ++  L D     + +       + ++    V G  FH          +   +K  +
Sbjct: 149 EAKAAQCPLGDKFGCDADIDASALMLLAKALDLTVTGTSFHVGSGCTELEAYERAIKKAK 208

Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQ---RLKEFSEKYSVQIYLEPGEAI 237
             F         ++ + +GGG   +D +  VK        ++       ++I  EPG   
Sbjct: 209 NIFKFGELLGYDLKLLDIGGGFPGSDDEQFVKIAANVNRAVQRHFADERIEIIAEPGRFF 268

Query: 238 VTNTTTLNTTVLDISE-----------NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286
           V    TL   +    E                  V  S    + D+ L      +     
Sbjct: 269 VAAAYTLVCKIHAKREVRNAAGKLDTVMYYLNDGVYGSFNCILYDHQLVTAQHYLEGAES 328

Query: 287 PYTAM--VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
             T    + G SC A D   E      +  GD + F ++  Y +   + FNG  +P
Sbjct: 329 LPTFKSLIWGPSCDALDKISENLRLPNLNRGDLLGFPNMGAYTVPIASAFNGFPLP 384


>gi|90418748|ref|ZP_01226659.1| ornithine decarboxylase [Aurantimonas manganoxydans SI85-9A1]
 gi|90336828|gb|EAS50533.1| ornithine decarboxylase [Aurantimonas manganoxydans SI85-9A1]
          Length = 377

 Score =  157 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 44/357 (12%), Positives = 102/357 (28%), Gaps = 29/357 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   + +N +       ++   +  A+K   A  +   L         +S+ EV 
Sbjct: 18  PCLIVDLDIVEDNFNAFRKALPDSA--IFYAVKANPAPEVLKLLAGLGSNFDCASVAEVE 75

Query: 65  LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +           +Y      +     A          + V ++ K    A        + 
Sbjct: 76  MALNAGATPRRISYGNTIKKERDIARAHQLGVALFAVDCVEEVEKVARAAPGARVFCRVL 135

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
            +   +           P   +         +      G+ FH   +      + A + +
Sbjct: 136 TDGEGAEWPLSRKFGCVPDMAIDVLVH--ANALGLVATGVSFHVGSQQTDTGAWDAAIAD 193

Query: 182 IEKEF---GHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSVQIYLE 232
               F         +  +++GGG                +     L+        +  +E
Sbjct: 194 ARFVFEALAEKGIVLTLVNMGGGFPTRYLKDVPAAAEYGRAIFASLRTHFGNRLPETIIE 253

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPN 284
           PG  +V +   +   V+ +S+           ++          + + + Y    T +  
Sbjct: 254 PGRGMVGDAGVVKAEVVLVSKKSDTDANRWVYLDIGKFGGLAETMDEAIRYP-IVTRHDG 312

Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337
                 ++ G +C + D+  E   +     + +GD +  E    Y     +  FNG 
Sbjct: 313 GATEPCVIAGPTCDSADVLYEKTPYPLPLALTVGDEVLIEGTGAYTTTYASVAFNGF 369


>gi|330501823|ref|YP_004378692.1| ornithine decarboxylase [Pseudomonas mendocina NK-01]
 gi|328916109|gb|AEB56940.1| ornithine decarboxylase [Pseudomonas mendocina NK-01]
          Length = 387

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 55/361 (15%), Positives = 117/361 (32%), Gaps = 30/361 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+ +ID+Q + +  D           K+  A+K   A  + + L         +S+YE
Sbjct: 25  ETPFVVIDRQIIADAYDQLGNCF--PFAKVYYAVKANPATEIIELLRDKGSSFDIASIYE 82

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +        G E  +Y    K                  ++ + L      A      + 
Sbjct: 83  LDKVMATGVGPERISYGNTIKKSRDIRYFFDKGVRLFATDSEADLRNIAKAAPGSKIYVR 142

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177
           +    S S          +   +        I ++   +   G+ FH   + +    + A
Sbjct: 143 ILTEGSNSA---DWPLSRKFGCQPDMALDLLILAKQLGLVPYGISFHVGSQQRDIDVWDA 199

Query: 178 MLKNIEKEF----GHFITQIEWISLGGGIHFTD--KDYPVKDFCQRL----KEFSEKYSV 227
            +  ++  F          ++ I++GGG       +   ++ + + +    KE       
Sbjct: 200 AIAKVKVIFERLKEEDGITLQMINMGGGFPANYIQRTNDLETYAEEITRFLKEDFGDELP 259

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIY 282
           +I LEPG +++ N   L + V+ ++        + +          +       +     
Sbjct: 260 EIILEPGRSLIANAGVLVSEVVLVARKSRTAVERWVYADVGKFSGLIETMDEAIKFPIWT 319

Query: 283 PNTGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337
              G     ++ G +C + DI  E +       +  GDR+ +     Y  +     FNG 
Sbjct: 320 EKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLASGDRLYWLSTGAYTTSYSAVEFNGF 379

Query: 338 N 338
            
Sbjct: 380 P 380


>gi|158300267|ref|XP_320233.4| AGAP012308-PA [Anopheles gambiae str. PEST]
 gi|157013076|gb|EAA00673.4| AGAP012308-PA [Anopheles gambiae str. PEST]
          Length = 414

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 66/363 (18%), Positives = 121/363 (33%), Gaps = 31/363 (8%)

Query: 19  DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAY 77
              +++R    V    A+KC     +  TL     G   +S  E+          +   +
Sbjct: 53  KHLVWLRSMPRVTPFYAVKCNDDPAILATLAALGTGFDCASEAEMRTILALGVTPDRIIF 112

Query: 78  NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPN 137
               K  +  A             ++    K   +    ++ LRI          L    
Sbjct: 113 AHPIKSVQALAFAKAHGIRRMTFDNECELEKVAREYPEAELVLRIRHDSDRVLIALGKKF 172

Query: 138 RPFSR-LGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG----HFITQ 192
              +R  G     + ++    V G+ FH  C +    CF   + +    F         +
Sbjct: 173 GCDARGDGRVLLARAQALGVAVIGVSFHVGCGSLDADCFYHAIASARSVFDYAKDELGMR 232

Query: 193 IEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ-------IYLEPGEAIVTNTTTLN 245
           +  + +GGG    D D P+  + + +    +++          +  EPG   V +  TL 
Sbjct: 233 LWLLDVGGGFP-GDNDKPIDQYAEAVSRALQEFFPPEQDEEVYVLGEPGRFYVGSAATLL 291

Query: 246 TTVL-------DISENIKNLVIVDSSVEAHVPDYLLYQESATI----------YPNTGPY 288
           TTV        D  +  + +  ++  V   + D+L  +E   +            +   +
Sbjct: 292 TTVQGKKIVRDDAGQIQQMMYYINDGVFGTLFDWLSLREIKDLKRAVPLVRREREHEPAF 351

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348
              + G +C + DI  E        IGD I FE++  Y +     FNG   PT+ V   +
Sbjct: 352 PTTIWGPTCDSTDIVCEDVPYPEHHIGDYIVFENLGAYGMTFATNFNGFPKPTVQVYVKE 411

Query: 349 GTI 351
            T 
Sbjct: 412 HTW 414


>gi|319781640|ref|YP_004141116.1| ornithine decarboxylase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317167528|gb|ADV11066.1| Ornithine decarboxylase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 377

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 46/362 (12%), Positives = 105/362 (29%), Gaps = 34/362 (9%)

Query: 3   KT-PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            T P  ++D   + +N             ++  A+K   A  +   L        ++S+ 
Sbjct: 15  PTGPCLVVDLDVVRDNFRAFEKAL--PDSRIYYAVKANPAPEILRLLAAMGSSFDTASVA 72

Query: 62  EVMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           EV +        +  ++      +     A          + V ++ K    A       
Sbjct: 73  EVEMAMDAGAPADRISFGNTIKKERDIARAYQLGIRLFAVDCVEEVEKIARVAPGARVFC 132

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFS 176
            +  +   +          +              ++   ++  G+ FH   +      + 
Sbjct: 133 RVLTDGEGAEW----PLSRKFGCVPAMAVDVLRHAKGLGLDAYGVSFHVGSQQTDLTAWD 188

Query: 177 AMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSV 227
             L + +  F         ++ +++GGG                      L++       
Sbjct: 189 RALADAKVVFATLAEEGIVLKMVNMGGGFPTRYLRDVPAAQAYGQAIFSALRKHFGNAIP 248

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESA 279
           +  +EPG  +V N   + + V+ IS+   N  +            +   + + + Y    
Sbjct: 249 ETIIEPGRGMVGNAGVIKSEVVLISKKAANDNVRWVFLDIGKFGGLAETMDEAIRYPIVT 308

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FN 335
                      ++ G +C + D+  E   +     + IGD +  E    Y        FN
Sbjct: 309 AHDGTETA-PCVLAGPTCDSADVMYEKTPYPLPLSLTIGDEVLIEGTGAYTTTYSAVAFN 367

Query: 336 GI 337
           G 
Sbjct: 368 GF 369


>gi|188582859|ref|YP_001926304.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium populi BJ001]
 gi|179346357|gb|ACB81769.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium populi BJ001]
          Length = 429

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 50/390 (12%), Positives = 100/390 (25%), Gaps = 39/390 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   +             +  ++  ++K      +     +   G   +S  E
Sbjct: 39  GTPLFVYDAATMRRTYRALCAAVA-SFAEVDFSVKASPNPAVIRVFREEGAGAEIASGAE 97

Query: 63  VMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
                      E   +    K        V  N   I      ++ +    A++    + 
Sbjct: 98  FEAALKAGVAPEKILFAGPGKGAADLDRVVAGNIGEIHLENREEMVRVAAAAERHGVTVR 157

Query: 120 LRINPSVSY-------SKFILADPNRPFSRLGEKCKDKIESEIK-NVNGLMFHNNCENKS 171
           + +  +                 P        E   D +E+  +  + GL      +   
Sbjct: 158 VALRINPGATAQGGAMRMGGKPSPFGFDEEEMETAIDAVEAMPRLRLVGLHLFAGTQGLK 217

Query: 172 FLCFSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPV-----------KDFCQ 216
                           +        +E I LGGG+                     D   
Sbjct: 218 AETLLGQWAYGLGLAARIAQRTGRALETIDLGGGLGIPYFSGEAALDLGAIRAGLPDLIA 277

Query: 217 RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY---- 272
            L+        ++ LEPG  +  +       VL + ++  +  ++      H        
Sbjct: 278 TLRADPRLAGARVVLEPGRYLAGSAGLYVARVLAVKDSRGSRFVITDGGMHHHLAASGNL 337

Query: 273 -----LLYQESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
                  +  +A +     P  A  V G  C   D+        P+  GD ++      Y
Sbjct: 338 GQIVKRDFPLAAVVEDPEAPRAATAVVGPLCTPLDMLARAAPLPPLAEGDLVAVLQSGAY 397

Query: 327 NINRK-NWFNGINMPTIAVKNVDGTIKAIR 355
            +      F     P   +    G  + IR
Sbjct: 398 GLTASPTGFLSHPTPAEVLV-EGGRAEMIR 426


>gi|251790262|ref|YP_003004983.1| Diaminopimelate decarboxylase [Dickeya zeae Ech1591]
 gi|247538883|gb|ACT07504.1| Diaminopimelate decarboxylase [Dickeya zeae Ech1591]
          Length = 418

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 52/377 (13%), Positives = 102/377 (27%), Gaps = 32/377 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            ++ D   L  ++   +      GV+L  A+K  +   + D +   + G   SS  E+  
Sbjct: 26  AFVYDLTALRRHVGEVMAALP-PGVELYYAIKANSEKPILDAIAPLVHGFEISSGGEIAR 84

Query: 66  GHEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                  +   ++           A+    + I   +  ++ + + +A++      + I 
Sbjct: 85  VAGCATRKPFVFSGPGKLDSDFDLALEQGVEAIHVESRHEIARLQQRAKRHGVVQPVFIR 144

Query: 124 PSVS---------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174
            +                        + L +  +D   +    + G   H          
Sbjct: 145 INPELASSLTSKLAMAGTPTPFGMDEADLPDAVRDVDNASHLQLKGFHVHAMSHQMVVER 204

Query: 175 FSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKY 225
              +L      +  +         I  +++GGGI       + +     C  L+    + 
Sbjct: 205 HQQLLDLYLTRWPQWKALSAQPQLITHLNVGGGIGVPYLTPERFDWPALCDYLRTRLAQQ 264

Query: 226 SVQIY--LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282
                   EPG  I          VLD   +     +V                +   I+
Sbjct: 265 PDVPVVRFEPGRFISAYCGYYAIEVLDKKRSHGKHFLVCRGGTHQFRLPVAQGHDHPVIH 324

Query: 283 -------PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WF 334
                           V G+ C   D+         V IGD +       Y  N  +  F
Sbjct: 325 LPLTSMPTTGETRDWTVVGQLCTPKDVLSRDQRLTDVNIGDLLVLPLAGAYGYNISHADF 384

Query: 335 NGINMPTIAVKNVDGTI 351
                P       DG I
Sbjct: 385 LCHPRPEQYFLIDDGVI 401


>gi|134291178|ref|YP_001114947.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia vietnamiensis G4]
 gi|134134367|gb|ABO58692.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia vietnamiensis G4]
          Length = 402

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 41/375 (10%), Positives = 95/375 (25%), Gaps = 34/375 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+++ D+  L   +          G+ L  ++K      +   L   MDG   +S  E+
Sbjct: 29  TPFFVYDRATLDARVCMLRETLP-TGIDLHYSVKANPLPAVVHHLAPQMDGFDVASANEM 87

Query: 64  MLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            +        E   +        ++   +++   I   +V+QL        +L  +  + 
Sbjct: 88  AVALNAGMPAELIGFAGPGKSRDDLRRAVASGVNIHLESVTQLRLVTALGWELGVQPKVA 147

Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174
           I  +   +            S  G   +        +++    + G       +      
Sbjct: 148 IRVNPDFHVDHSGMRMGGGASPFGLDAEQVPELLRELDARDVTLAGFHIFWGSQCLHAPT 207

Query: 175 FSAMLKNIEKEFGHFITQI----EWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY----- 225
                +            +    ++++ GGG                + +    +     
Sbjct: 208 VIHAQRKSADLVVRLAGGLPVAPQYVNFGGGFGIPYFAGETPLDLAAVADAMHDWLGVLR 267

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH----------VPD 271
                 +  LE G  +V         ++D   +     ++      H          +  
Sbjct: 268 GRLPGTRTVLEFGRYLVGEAGIYVCRIIDRKISRDRTFLITDGGLHHHLAASGNFGQILR 327

Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                               + G  C   D   +       +IGD +       Y  +  
Sbjct: 328 RNFPVTIGNRQTQAPTERCHIVGCLCTPLDRIADDVLLPEAQIGDFVVVFQSGAYGRSAS 387

Query: 332 N-WFNGINMPTIAVK 345
              F G       + 
Sbjct: 388 PRNFLGHPDAIEMLV 402


>gi|187922157|ref|YP_001893799.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Burkholderia phytofirmans PsJN]
 gi|187713351|gb|ACD14575.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Burkholderia phytofirmans PsJN]
          Length = 402

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 44/376 (11%), Positives = 105/376 (27%), Gaps = 34/376 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP++  D+  +   +     +  +A ++L  ++K      +   L Q +DG   +S  E
Sbjct: 28  QTPFFAYDRSAIDTRVRELRSLLPSA-MQLHYSIKANPMPAVIHYLAQRVDGFDVASAQE 86

Query: 63  VMLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           + L        ++  +        ++   +++   +   + +QL        +L  +  +
Sbjct: 87  MALALDAGATPDSIGFAGPGKSHDDLRRAVASGVNVHVESDTQLRLVTALGWELGVQPNV 146

Query: 121 RINPSVS-YSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCENKS-- 171
            I  +                +  G           +       + G       +     
Sbjct: 147 VIRINPDFQVGHSGMRMGGSAAPFGVDVDQIPALLHELETREVALAGFHVFWGSQCLHAS 206

Query: 172 --FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSEKY 225
                    +  I +        + +++LGGG              K  C+ + ++  + 
Sbjct: 207 TIIEAQRQSVDLILRLASDLPRPLRFVNLGGGFGIPYFPGETPLDTKVVCEAMHDWLPRL 266

Query: 226 SVQ-----IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-----LLY 275
             +       LE G  +V         V+D   +     ++      H          + 
Sbjct: 267 CERLPGTTPILELGRYLVGEAGIYVCRVIDRKVSRGRTFVITDGGLHHHLAASGNFGQVL 326

Query: 276 QESATIYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
           + +  +     P         V G  C   D   +        IGD +  +    Y  + 
Sbjct: 327 RRNFPVVIGNRPDGISRERCYVVGCLCTPLDRLADDVELPEAHIGDFVVVKQSGAYGHSA 386

Query: 331 KN-WFNGINMPTIAVK 345
               F     P   + 
Sbjct: 387 SPVHFLSHPEPVEMLV 402


>gi|307293323|ref|ZP_07573169.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Sphingobium chlorophenolicum L-1]
 gi|306881389|gb|EFN12605.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Sphingobium chlorophenolicum L-1]
          Length = 410

 Score =  156 bits (395), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 52/377 (13%), Positives = 100/377 (26%), Gaps = 35/377 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   +                 L  A+K      +   + + +DG   +S  E
Sbjct: 34  DTPLFVYDMAIVEGQARAFRDAMPPTLP-LHYAVKANPYAPLLQRMAKLVDGFDVASGGE 92

Query: 63  VMLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           +    E        ++     +D E+ A + +  TI   +  +  +     ++  +   L
Sbjct: 93  LTRALEAGMDPAHISFAGPGKRDDELIAAIDSGTTINLESEGEARRAIALGEQRGRTPKL 152

Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSFL 173
            I  +  +  K             G   +   +   + ++      G       +     
Sbjct: 153 AIRVNPDFDLKGSGMRMGGGAKPFGVDAERAADLARRVIDAGADWRGWHIFAGSQALGVE 212

Query: 174 CFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                                     ++LGGG          +   + + E  +    Q 
Sbjct: 213 ALIETQAATIDLATRLSDAVGVTPPLVNLGGGFGIPYFPGDERLDIRPIGEALDMLLEQR 272

Query: 229 --------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-----------V 269
                     +E G  +V       T ++DI ++     IV      H           V
Sbjct: 273 ADILQGSEFAMELGRWLVGEAGVYLTRIVDIKKSQGETFIVVDGGLHHQLAASGNFGTVV 332

Query: 270 PDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
                   +           A V G  C   D  G+     PV+ GD I+      Y  +
Sbjct: 333 RRNYPIAVANRFGQAPAQEAATVVGCLCTPIDRLGDKVALPPVEEGDLIAIFLAGAYGAS 392

Query: 330 RKN-WFNGINMPTIAVK 345
                F G   P   + 
Sbjct: 393 ASPAAFLGHPAPLELLI 409


>gi|327297983|ref|XP_003233685.1| ornithine decarboxylase [Trichophyton rubrum CBS 118892]
 gi|326463863|gb|EGD89316.1| ornithine decarboxylase [Trichophyton rubrum CBS 118892]
          Length = 460

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 56/389 (14%), Positives = 110/389 (28%), Gaps = 42/389 (10%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y+ D  ++               VK   A+KC     +   +    +G   +S  E+ 
Sbjct: 73  PFYVADLGEVYRQHIRWKTNLPR--VKPFYAVKCNPDPQVLRLMAVLGNGFDCASKAEID 130

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           L            Y    K        S          +    +K K      ++ LRI 
Sbjct: 131 LALAAGVDPSRIIYAHPCKTKSYLRYASQVGVKQMTFDNTDELYKIKEMCPDAELYLRIL 190

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S S   L+              +       NV G+ FH     +    F   +++  
Sbjct: 191 TDDSASLCRLSMKFGASLSSARPLLELAHGLGLNVVGVSFHVGSGAEDPKSFIKAVQDAR 250

Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
             F         ++ + +GGG      +         L  +   + +++  EPG   V  
Sbjct: 251 FVFDCAAEIGFDLKVLDVGGGFSDDTFEPFAAALGDALDTYFPPH-IRVIAEPGRYYVAT 309

Query: 241 TTTLNTTVLDISE-------------------------NIKNLVIVDSSVEAHVPDYLLY 275
             TL   V+   +                         +   ++ ++  V  +  + +  
Sbjct: 310 AFTLAANVIARRDVGVEELLSDSESDSTTPSRASTPSSSGAYMIYLNDGVYGNFSNIVFD 369

Query: 276 QESA-------TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYN 327
            +              + P    + G +C   D+  E       + +G+ + FE++  Y 
Sbjct: 370 HQHPVAQILTKDDDYTSAPIEYSIWGPTCDGIDVISERVTLNGLLGVGNWLYFENMGAYT 429

Query: 328 INRKNWFNGI--NMPTIAVKNVDGTIKAI 354
                 FNG       I +    G    +
Sbjct: 430 QCSATRFNGFTDKHEVIYIVTEPGAAALL 458


>gi|84500171|ref|ZP_00998437.1| decarboxylase, pyridoxal-dependent [Oceanicola batsensis HTCC2597]
 gi|84392105|gb|EAQ04373.1| decarboxylase, pyridoxal-dependent [Oceanicola batsensis HTCC2597]
          Length = 390

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 52/362 (14%), Positives = 113/362 (31%), Gaps = 24/362 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  +ID  ++                ++  A+K      + + L     G  ++S  E+ 
Sbjct: 32  PTLVIDVDRVEEQYHALKAGLGR--ARIHYAVKANPQREIVERLVDLGSGFDAASRAEIE 89

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           L        E  ++    K              +F   ++    K        ++ +R+ 
Sbjct: 90  LCLSLGARPENISFGNTVKKVRDIEFAWGAGVTLFAADAEEELEKIAEHAPGAEVYIRLI 149

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF---SAMLK 180
              S + + L+              D          G  FH   + K    +      + 
Sbjct: 150 VDASEADWPLSRKFGCARDKAIMLLDMARELGLRPVGFSFHVGSQTKRAEMWTATLDQVA 209

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEKYSVQIYL--EPGE 235
            + +       ++  +++GGG      +    P     + ++  +E++    ++  EPG 
Sbjct: 210 AVWEAAKEAGHELTLLNIGGGFPAYYGEEIQRPTAYAARVMELITERFGDVAHVMAEPGR 269

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPNTGP 287
            +V     +   VL +S   +N +           S +   + + + YQ   T   +   
Sbjct: 270 GLVAEAGAIAAEVLLVSRKSENDLHRWVYLDIGKFSGLAETMDEAIRYQF-LTERDHEAT 328

Query: 288 YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIA 343
              ++ G SC + D+  E         ++ GDR    +   Y     +  FNG     + 
Sbjct: 329 GPCILAGPSCDSADVLYEKRPVELPLGLRSGDRFIIRNCGAYTSTYASVGFNGFPPLDVV 388

Query: 344 VK 345
           V 
Sbjct: 389 VL 390


>gi|321451794|gb|EFX63336.1| hypothetical protein DAPPUDRAFT_204767 [Daphnia pulex]
          Length = 517

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 57/366 (15%), Positives = 105/366 (28%), Gaps = 30/366 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y++D   ++          K   V    A+KC     + +TL         +S  E+  
Sbjct: 43  FYVLDVGDIIRKHKEWK--LKMPRVAPFYAVKCNDNRTVLETLASLGASFDCASKSEIAK 100

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             +     +   +    K        S+ +       ++   +K K      K+ LRI  
Sbjct: 101 VLDLGVETDRIIFANPAKQVSHIRYASSVNVQAMTFDNESELYKVKEHHPTAKMVLRIRC 160

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
                +  L      F +   +          ++ G+ FH          F   +    +
Sbjct: 161 DAKRVQCPLGIKFGAFPKDAPRLVALAAKLGVDLVGISFHVGSGCDEPEVFERCIVIGRQ 220

Query: 185 EF----GHFITQIEWISLGGGIHFTDKDYPVKDFC----QRLKEFSEKYSVQIYLEPGEA 236
            F      +   +  + LGGG                     + F E   V I  EPG  
Sbjct: 221 IFDLAARDYGINMTLLDLGGGYPGNRGSSINSIAAIVNSSLDRHFPEGCGVDIIAEPGRY 280

Query: 237 IVTNTTTLNTTVLDISEN-------------------IKNLVIVDSSVEAHVPDYLLYQE 277
            V +  TL T +    +                          V  S    + D+ +   
Sbjct: 281 YVASAFTLATRIHGRRQLTNDDEDADGPRTPANTSYFYYINDGVYGSFNCMLYDHAVVTP 340

Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                     ++  + G +C   D          + +GD + FED+  Y +     FNG 
Sbjct: 341 LLLEPRPGPDFSCNIWGPTCDGLDRIATNAQLPLMDVGDWLIFEDMGAYTLAAAGCFNGF 400

Query: 338 NMPTIA 343
            +P + 
Sbjct: 401 PVPKVY 406


>gi|146281380|ref|YP_001171533.1| ornithine decarboxylase [Pseudomonas stutzeri A1501]
 gi|145569585|gb|ABP78691.1| probable ornithine decarboxylase [Pseudomonas stutzeri A1501]
 gi|327479557|gb|AEA82867.1| ornithine decarboxylase [Pseudomonas stutzeri DSM 4166]
          Length = 387

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 57/359 (15%), Positives = 119/359 (33%), Gaps = 26/359 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+ +ID + +    D      +    K+  A+K   A  + D L         +S+YE
Sbjct: 25  ETPFVVIDTETISKAYDDLRAGFEF--AKVYYAVKANPAVEIIDLLRDKGSSFDIASIYE 82

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +        G E  +Y    K              +F T S+ +  ++ A+         
Sbjct: 83  LDKVMSRGVGPERISYGNTIKKSRDIRYFFEKGVRMFATDSEAD-LRNIAKAAPGAKVYV 141

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179
              +   +        +   +        I +    +   G+ FH   + +    + A +
Sbjct: 142 RILTEGSTTADWPLSRKFGCQTDMAMDLLILARQLGLEPYGISFHVGSQQRDISVWDAAI 201

Query: 180 KNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSVQI 229
             ++  F         +++ I++GGG                ++  + LKE       +I
Sbjct: 202 AKVKVIFERLKEEDGIELKMINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDDLPEI 261

Query: 230 YLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
            LEPG +++ N   L + V+ ++        + + +        +       +       
Sbjct: 262 ILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYVDVGKFSGLIETMDESIKFPIYTEK 321

Query: 285 TGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338
            G     ++ G +C + DI  E +       + IGDR+ +     Y  +     FNG  
Sbjct: 322 KGEVEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLYWLSTGAYTTSYSAVEFNGFP 380


>gi|255326256|ref|ZP_05367342.1| diaminopimelate decarboxylase [Rothia mucilaginosa ATCC 25296]
 gi|255296710|gb|EET76041.1| diaminopimelate decarboxylase [Rothia mucilaginosa ATCC 25296]
          Length = 506

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 57/446 (12%), Positives = 116/446 (26%), Gaps = 84/446 (18%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA------GVKLLLALKCFAAWGMFDTLNQYMDGTT 56
           +TP Y+  +              + A       V +  A K F +  +     +      
Sbjct: 54  ETPQYVFSETTFRTRARAYRTAFEQAFAAHGAKVSVYYAGKSFLSTAVARWATEEGLCLD 113

Query: 57  SSSLYEVMLG-HEKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKA-- 111
           ++S  E+ L    +  G   A +   K       A+ +    ++ ++V +L   +     
Sbjct: 114 TASGGELALALRAQVPGANIALHGNNKSEAEIARAIRNGLGRVVADSVDELKLIERVYAE 173

Query: 112 -----------QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKC----------KDK 150
                            + +RI P V  S            + G             ++ 
Sbjct: 174 LAAERVAEGEEPYAPVPVLIRITPGVHASTHESIATAHEDQKFGMSLQLGTAALAGLEEA 233

Query: 151 IESEIK---------------------NVNGLMFHNNCENKSFLCFSAML----KNIEKE 185
                                      +  G+  H   +      F        + + + 
Sbjct: 234 EMEHWGVEATDSYAALAAAILNATDSLDFRGIHCHIGSQIFEAEGFEQAATTALEFMNRL 293

Query: 186 FGHFITQIEWISLGGGIHFTDKDYPVKDFC-----------QRLKEFSEKYSVQIYLEPG 234
                  +  + LGGG      +                      E        +  EPG
Sbjct: 294 NRDLGVTLPELDLGGGYGIGYTEADHPRSITEVTESIAASVAATCERLGMAIPHMSFEPG 353

Query: 235 EAIVTNTTTLNTTVLDISE----------NIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
            +I   +     TV  I             ++  V VD  +  +    L   + +    N
Sbjct: 354 RSISGPSGATLYTVGTIKNVSIEDENGEIRVRRYVSVDGGMSDNARPVLYESDYSVTLAN 413

Query: 285 TGP----YTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINM 339
             P      + V G+ C +GD+   + +    ++ GD ++      Y     + +N +  
Sbjct: 414 RAPAGEQVLSRVVGKHCESGDVVVRYCYLPADLQAGDILAVPATGAYCYVLGSNYNFLTR 473

Query: 340 PTIAVKNVDG-TIKAIREFSYNDYYN 364
           P +        +   IR     D   
Sbjct: 474 PPVIATAEGKPSRVMIRRQREEDMLA 499


>gi|67526777|ref|XP_661450.1| hypothetical protein AN3846.2 [Aspergillus nidulans FGSC A4]
 gi|40739921|gb|EAA59111.1| hypothetical protein AN3846.2 [Aspergillus nidulans FGSC A4]
          Length = 450

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 54/361 (14%), Positives = 106/361 (29%), Gaps = 35/361 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLL--ALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           +Y+ D  ++        +    + V+     A+KC     +   + +  +G   +S  E+
Sbjct: 75  FYVADMGEVYR--QHLRWKMNLSRVRPFYELAVKCNPDPEVLRLMAKLGNGFDCASKAEI 132

Query: 64  MLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
            +            Y    K        +          +    +K KA     ++ LRI
Sbjct: 133 DMALSTGVDPSRIIYAQPCKTKSYLRHAAKVGVKQMTFDNADELYKIKACYPEAELYLRI 192

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
               S S    +        +  +  +        + G+ FH     +    F   +++ 
Sbjct: 193 LTDDSNSLCQFSMKFGASLDVARQLLELAHQLELKIVGVSFHVGSGAEDPKAFLKAVQDA 252

Query: 183 EKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ---IYLEPGEA 236
              F        ++  + +GGG          + F   L    E Y      I  EPG  
Sbjct: 253 RLVFDQAAEIGHELHTLDVGGGF----TGETFEKFAAVLDSALETYFPPNIRIIAEPGRY 308

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY-------- 288
            V    TL   ++              +   ++ D +    S  I+ +  P         
Sbjct: 309 YVGGAFTLAANIIARRGVQDPENPSKDAYMIYLNDGVYGNFSNIIFDHQHPEARILSCAS 368

Query: 289 -----------TAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNG 336
                      T  + G +C   D+  +       + +GD + FE++  Y       FNG
Sbjct: 369 EINGRPVSEDVTYSIWGPTCDGIDVISQRSVLPGLLDVGDWLYFEEMGAYTRCSATRFNG 428

Query: 337 I 337
            
Sbjct: 429 F 429


>gi|326333860|ref|ZP_08200093.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Nocardioidaceae bacterium Broad-1]
 gi|325948442|gb|EGD40549.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Nocardioidaceae bacterium Broad-1]
          Length = 397

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 47/375 (12%), Positives = 105/375 (28%), Gaps = 34/375 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP++  D+  +   + +         V L  A+K      +   L + +D    +S  E+
Sbjct: 24  TPFFAYDRAAIDARVASLRSALPE-DVHLSYAVKANPMPAVVQHLARTVDALDVASGAEM 82

Query: 64  MLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            +  +     G            E+   ++    +   +  + ++  + A++L  +  + 
Sbjct: 83  RVALDTGIAPGSVSFAGPGKSVAELTQAVAAGVLVEIESPLEADRLVEAAERLGLRPRVA 142

Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174
           +  +     K           + G   +        +      V G    +  +N     
Sbjct: 143 VRVNPDFEVKGSGMRMGGGAQQFGVDAETVPLLLKTLHDRDVEVAGFHVFSGSQNLHAEI 202

Query: 175 ----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY----- 225
                 + +  + +        + ++++GGG                +    E+      
Sbjct: 203 LASAQESTVDLVLRLADDLPAAMTYLNIGGGFGIPYYAQDRPLDLDLVGSRLEELLARRV 262

Query: 226 -----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-------- 272
                S Q+ +E G  +V       T V+D   +     +V      H            
Sbjct: 263 RPSLPSAQVVIELGRYLVGEAGVYVTRVVDRKISRGKTFLVVDGGMHHQLAASGNFGQVI 322

Query: 273 -LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
              Y  S          T  V G  C   D+ G+       ++GD +       Y +   
Sbjct: 323 RRNYPISVAAAREGEEETVQVVGCLCTPLDLLGDKVSLPRAEVGDLVVVHQAGAYGLTAS 382

Query: 332 NW-FNGINMPTIAVK 345
              F     P   + 
Sbjct: 383 PTAFLSHPAPLEVLV 397


>gi|330955127|gb|EGH55387.1| diaminopimelate decarboxylase [Pseudomonas syringae Cit 7]
          Length = 402

 Score =  156 bits (394), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 56/378 (14%), Positives = 118/378 (31%), Gaps = 32/378 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            ++ D   L  ++   +     AGV+L  A+K  +   M +TL   + G   SS  E+  
Sbjct: 25  AFVYDLDALQQHVSEVMAALP-AGVELYYAIKANSEALMLETLAPLVSGFEISSGGEIER 83

Query: 66  GHEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                  + + ++     D ++ + L N    I   +++++ + +  A++  +   + + 
Sbjct: 84  VMACPTRKPYVFSGPGKLDSDLRSALLNKVEAIHLESLNEIARLQQLAEQAGRVQPVFLR 143

Query: 124 PSVS---------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174
            +                        + L E  +    +    + G   H      S   
Sbjct: 144 INPQLPAAQSSRLAMAGTATPFGIDEADLAEAVRRVDNASHLTLKGFHVHAMSHQMSVER 203

Query: 175 FSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKY 225
              +L    + +  +        Q+   ++GGGI       + +  +  C+ L++   + 
Sbjct: 204 HEQLLDFYLQRWQEWKALARDPSQLTHFNVGGGIGVDYLNSQQFDWQRLCRYLEKRLGEQ 263

Query: 226 SVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282
                L  EPG  I          VLD   +     +V                +   I+
Sbjct: 264 HDAPILRFEPGRFISAYCGYYAIEVLDSKTSHGEHFLVCRGGTHQFRLPVAQSHDHPVIH 323

Query: 283 PNTGPYT-------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WF 334
               P +         + G+ C   D+       K V IGD +       Y  N  +  F
Sbjct: 324 LPNAPQSTESSEQAYTIVGQLCTPKDVLSRRQPLKGVNIGDLLVLPLAGAYGYNISHADF 383

Query: 335 NGINMPTIAVKNVDGTIK 352
                P+         ++
Sbjct: 384 LCHPRPSQHFVRNGERVR 401


>gi|23499865|ref|NP_699305.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2
           [Brucella suis 1330]
 gi|62317058|ref|YP_222911.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2
           [Brucella abortus bv. 1 str. 9-941]
 gi|83269051|ref|YP_418342.1| Orn/DAP/Arg decarboxylase family protein [Brucella melitensis
           biovar Abortus 2308]
 gi|148558692|ref|YP_001257169.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2
           [Brucella ovis ATCC 25840]
 gi|161620188|ref|YP_001594074.1| lysine/ornithine decarboxylase [Brucella canis ATCC 23365]
 gi|163844298|ref|YP_001621953.1| hypothetical protein BSUIS_B0106 [Brucella suis ATCC 23445]
 gi|189022323|ref|YP_001932064.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus S19]
 gi|225628577|ref|ZP_03786611.1| Lysine/ornithine decarboxylase [Brucella ceti str. Cudo]
 gi|237816619|ref|ZP_04595611.1| Lysine/ornithine decarboxylase [Brucella abortus str. 2308 A]
 gi|254691458|ref|ZP_05154712.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus bv. 6 str.
           870]
 gi|254698345|ref|ZP_05160173.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254702533|ref|ZP_05164361.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella suis bv. 3 str. 686]
 gi|254706342|ref|ZP_05168170.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella pinnipedialis
           M163/99/10]
 gi|254711368|ref|ZP_05173179.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella pinnipedialis B2/94]
 gi|254711967|ref|ZP_05173778.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella ceti M644/93/1]
 gi|254715037|ref|ZP_05176848.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella ceti M13/05/1]
 gi|254720654|ref|ZP_05182465.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella sp. 83/13]
 gi|254731788|ref|ZP_05190366.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus bv. 4 str.
           292]
 gi|256014892|ref|YP_003104901.1| decarboxylase, ornithine/DAP/arginine decarboxylase family 2
           [Brucella microti CCM 4915]
 gi|256030002|ref|ZP_05443616.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella pinnipedialis
           M292/94/1]
 gi|256059653|ref|ZP_05449850.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella neotomae 5K33]
 gi|256158166|ref|ZP_05456082.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella ceti M490/95/1]
 gi|256252883|ref|ZP_05458419.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella ceti B1/94]
 gi|256256643|ref|ZP_05462179.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus bv. 9 str.
           C68]
 gi|260166947|ref|ZP_05753758.1| decarboxylase, ornithine/DAP/arginine decarboxylase family 2
           [Brucella sp. F5/99]
 gi|260544294|ref|ZP_05820115.1| orn/DAP/Arg decarboxylase, family 2 [Brucella abortus NCTC 8038]
 gi|260568562|ref|ZP_05839031.1| orn/DAP/Arg decarboxylase, family 2 [Brucella suis bv. 4 str. 40]
 gi|260757077|ref|ZP_05869425.1| orn/DAP/Arg decarboxylase 2 [Brucella abortus bv. 6 str. 870]
 gi|260759553|ref|ZP_05871901.1| orn/DAP/Arg decarboxylase 2 [Brucella abortus bv. 4 str. 292]
 gi|260762798|ref|ZP_05875130.1| orn/DAP/Arg decarboxylase 2 [Brucella abortus bv. 2 str. 86/8/59]
 gi|260882887|ref|ZP_05894501.1| orn/DAP/Arg decarboxylase 2 [Brucella abortus bv. 9 str. C68]
 gi|261216741|ref|ZP_05931022.1| orn/DAP/Arg decarboxylase 2 [Brucella ceti M13/05/1]
 gi|261219971|ref|ZP_05934252.1| orn/DAP/Arg decarboxylase 2 [Brucella ceti B1/94]
 gi|261313787|ref|ZP_05952984.1| orn/DAP/Arg decarboxylase 2 [Brucella pinnipedialis M163/99/10]
 gi|261318973|ref|ZP_05958170.1| orn/DAP/Arg decarboxylase 2 [Brucella pinnipedialis B2/94]
 gi|261319608|ref|ZP_05958805.1| orn/DAP/Arg decarboxylase 2 [Brucella ceti M644/93/1]
 gi|261323625|ref|ZP_05962822.1| orn/DAP/Arg decarboxylase 2 [Brucella neotomae 5K33]
 gi|261753106|ref|ZP_05996815.1| orn/DAP/Arg decarboxylase 2 [Brucella suis bv. 3 str. 686]
 gi|261756332|ref|ZP_06000041.1| orn/DAP/Arg decarboxylase [Brucella sp. F5/99]
 gi|265985700|ref|ZP_06098435.1| orn/DAP/Arg decarboxylase 2 [Brucella sp. 83/13]
 gi|265987023|ref|ZP_06099580.1| orn/DAP/Arg decarboxylase 2 [Brucella pinnipedialis M292/94/1]
 gi|265996684|ref|ZP_06109241.1| orn/DAP/Arg decarboxylase 2 [Brucella ceti M490/95/1]
 gi|294853126|ref|ZP_06793798.1| ornithine decarboxylase [Brucella sp. NVSL 07-0026]
 gi|297249998|ref|ZP_06933699.1| ornithine decarboxylase [Brucella abortus bv. 5 str. B3196]
 gi|306837380|ref|ZP_07470259.1| ornithine decarboxylase [Brucella sp. NF 2653]
 gi|306841124|ref|ZP_07473842.1| ornithine decarboxylase [Brucella sp. BO2]
 gi|306845478|ref|ZP_07478051.1| ornithine decarboxylase [Brucella sp. BO1]
 gi|23463438|gb|AAN33310.1| decarboxylase, ornithine/DAP/arginine decarboxylase family 2
           [Brucella suis 1330]
 gi|62197251|gb|AAX75550.1| decarboxylase, ornithine/DAP/arginine decarboxylase family 2
           [Brucella abortus bv. 1 str. 9-941]
 gi|82939325|emb|CAJ12264.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella melitensis biovar
           Abortus 2308]
 gi|148369977|gb|ABQ62849.1| decarboxylase, ornithine/DAP/arginine decarboxylase family 2
           [Brucella ovis ATCC 25840]
 gi|161336999|gb|ABX63303.1| Lysine/ornithine decarboxylase [Brucella canis ATCC 23365]
 gi|163675021|gb|ABY39131.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
 gi|189020897|gb|ACD73618.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus S19]
 gi|225616423|gb|EEH13471.1| Lysine/ornithine decarboxylase [Brucella ceti str. Cudo]
 gi|237787432|gb|EEP61648.1| Lysine/ornithine decarboxylase [Brucella abortus str. 2308 A]
 gi|255997552|gb|ACU49239.1| decarboxylase, ornithine/DAP/arginine decarboxylase family 2
           [Brucella microti CCM 4915]
 gi|260097565|gb|EEW81439.1| orn/DAP/Arg decarboxylase, family 2 [Brucella abortus NCTC 8038]
 gi|260155227|gb|EEW90308.1| orn/DAP/Arg decarboxylase, family 2 [Brucella suis bv. 4 str. 40]
 gi|260669871|gb|EEX56811.1| orn/DAP/Arg decarboxylase 2 [Brucella abortus bv. 4 str. 292]
 gi|260673219|gb|EEX60040.1| orn/DAP/Arg decarboxylase 2 [Brucella abortus bv. 2 str. 86/8/59]
 gi|260677185|gb|EEX64006.1| orn/DAP/Arg decarboxylase 2 [Brucella abortus bv. 6 str. 870]
 gi|260872415|gb|EEX79484.1| orn/DAP/Arg decarboxylase 2 [Brucella abortus bv. 9 str. C68]
 gi|260918555|gb|EEX85208.1| orn/DAP/Arg decarboxylase 2 [Brucella ceti B1/94]
 gi|260921830|gb|EEX88398.1| orn/DAP/Arg decarboxylase 2 [Brucella ceti M13/05/1]
 gi|261292298|gb|EEX95794.1| orn/DAP/Arg decarboxylase 2 [Brucella ceti M644/93/1]
 gi|261298196|gb|EEY01693.1| orn/DAP/Arg decarboxylase 2 [Brucella pinnipedialis B2/94]
 gi|261299605|gb|EEY03102.1| orn/DAP/Arg decarboxylase 2 [Brucella neotomae 5K33]
 gi|261302813|gb|EEY06310.1| orn/DAP/Arg decarboxylase 2 [Brucella pinnipedialis M163/99/10]
 gi|261736316|gb|EEY24312.1| orn/DAP/Arg decarboxylase [Brucella sp. F5/99]
 gi|261742859|gb|EEY30785.1| orn/DAP/Arg decarboxylase 2 [Brucella suis bv. 3 str. 686]
 gi|262550981|gb|EEZ07142.1| orn/DAP/Arg decarboxylase 2 [Brucella ceti M490/95/1]
 gi|264659220|gb|EEZ29481.1| orn/DAP/Arg decarboxylase 2 [Brucella pinnipedialis M292/94/1]
 gi|264664292|gb|EEZ34553.1| orn/DAP/Arg decarboxylase 2 [Brucella sp. 83/13]
 gi|294818781|gb|EFG35781.1| ornithine decarboxylase [Brucella sp. NVSL 07-0026]
 gi|297173867|gb|EFH33231.1| ornithine decarboxylase [Brucella abortus bv. 5 str. B3196]
 gi|306274129|gb|EFM55948.1| ornithine decarboxylase [Brucella sp. BO1]
 gi|306288845|gb|EFM60159.1| ornithine decarboxylase [Brucella sp. BO2]
 gi|306407572|gb|EFM63772.1| ornithine decarboxylase [Brucella sp. NF 2653]
          Length = 377

 Score =  156 bits (394), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 51/357 (14%), Positives = 112/357 (31%), Gaps = 29/357 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   +  N          +  ++  A+K   A  +   L        ++S+ E+ 
Sbjct: 18  PCLVVDTDVVRENYQGFEKALPYS--RIFYAVKANPAPEILRLLASLGSSFDTASVAEIE 75

Query: 65  LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +  E     +  +Y      +     A          + V ++ K    A     ++  R
Sbjct: 76  MALEAGATPDRISYGNTIKKERDIARAFDLGIRLYAVDCVEEVEKIARVA--PGSRVFCR 133

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +      +++ L+        + +    + ++   +  G+ FH   +      +   L +
Sbjct: 134 VLTDGEGAEWPLSRKFGCVPAMAKDVLRRAKALGLDAYGVSFHVGSQQTDLTAWDRALAD 193

Query: 182 IEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLE 232
               F         +  +++GGG                      L         +  +E
Sbjct: 194 AAAVFRTLADEGIILRMVNMGGGFPTRYLKDVPTAQAYGMAIFDALSRHFGNRIPETIIE 253

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPN 284
           PG  +V N   + T V+ +S    N  +    ++          + + + YQ   T +  
Sbjct: 254 PGRGMVGNAGVIKTEVVLVSRKADNDNVRWVYLDIGKFGGLAETMDEAIRYQ-IVTPHDG 312

Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337
           +     ++ G +C + D+  E   +     + IGD I  E    Y        FNG 
Sbjct: 313 SETEPCVLAGPTCDSADVLYEKTPYPLPVSLTIGDEILIEGTGAYTTTYSAVAFNGF 369


>gi|325190815|emb|CCA25305.1| ornithine decarboxylase 1 putative [Albugo laibachii Nc14]
          Length = 599

 Score =  156 bits (394), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 60/387 (15%), Positives = 107/387 (27%), Gaps = 35/387 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y++D   L               VK   A+KC     +  TL     G   +S  E+  
Sbjct: 206 FYVVDLHALEKRYQLWNKHL--PFVKPFYAVKCNPDQQLLQTLAHLGCGFDCASRAEIDA 263

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                   +   Y    K           + + + F++  +L+K +         + L +
Sbjct: 264 VLRLGVHAKEIIYANPCKQPSHIRHSASQSVNLMTFDSHDELDKIEATNSNAKLVLRLYV 323

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
                    +          +             +V G+ FH      S   +S  +K  
Sbjct: 324 -DDTKAICRLGTKFGAMLHDVPSILSHAKT-LGLDVVGVSFHVGSGCYSVSAYSDAVKRA 381

Query: 183 EKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQ------RLKEFSEKYSVQIYLEP 233
              F    +     E + +GGG   T+        C         K F     VQ+  EP
Sbjct: 382 RTAFDIGANLGFSFELLDIGGGFPGTENGPITFKECAQELATSLEKWFPRSSHVQVISEP 441

Query: 234 GEAIVTNTTTLNTTVLDIS----------------ENIKNLVIVDSSVEAHVPDYLLYQE 277
           G     +T TL   V+                           +  S    + D+   Q 
Sbjct: 442 GRFFAASTHTLAACVIGRKVAPILESFVHETVESSYMYFINDGLYGSFNCLIYDHPDIQP 501

Query: 278 SATIYPNTGPYTAM---VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                            + G +C   D   +      +++G  I F  +  Y     + F
Sbjct: 502 VVLATEPVNSKDFRLASIWGPTCDGMDCIMKDIRMPQLRVGQWICFPSMGAYTCAAGSDF 561

Query: 335 NGINMPTIAVKNVDGTIKAIREFSYND 361
           NG   P     +     +  +E  ++D
Sbjct: 562 NGFAPPAKLYIDTKQLFEFRQEMQFSD 588


>gi|17989478|ref|NP_542111.1| ornithine decarboxylase [Brucella melitensis bv. 1 str. 16M]
 gi|225685964|ref|YP_002733936.1| Lysine/ornithine decarboxylase [Brucella melitensis ATCC 23457]
 gi|256043023|ref|ZP_05445969.1| Lysine/ornithine decarboxylase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256111987|ref|ZP_05452938.1| Lysine/ornithine decarboxylase [Brucella melitensis bv. 3 str.
           Ether]
 gi|256262911|ref|ZP_05465443.1| orn/DAP/Arg decarboxylase [Brucella melitensis bv. 2 str. 63/9]
 gi|260564257|ref|ZP_05834742.1| orn/DAP/Arg decarboxylase, family 2 [Brucella melitensis bv. 1 str.
           16M]
 gi|265989462|ref|ZP_06102019.1| orn/DAP/Arg decarboxylase 2 [Brucella melitensis bv. 1 str. Rev.1]
 gi|265993438|ref|ZP_06105995.1| orn/DAP/Arg decarboxylase 2 [Brucella melitensis bv. 3 str. Ether]
 gi|17985359|gb|AAL54375.1| ornithine decarboxylase [Brucella melitensis bv. 1 str. 16M]
 gi|225642069|gb|ACO01982.1| Lysine/ornithine decarboxylase [Brucella melitensis ATCC 23457]
 gi|260151900|gb|EEW86993.1| orn/DAP/Arg decarboxylase, family 2 [Brucella melitensis bv. 1 str.
           16M]
 gi|262764308|gb|EEZ10340.1| orn/DAP/Arg decarboxylase 2 [Brucella melitensis bv. 3 str. Ether]
 gi|263000131|gb|EEZ12821.1| orn/DAP/Arg decarboxylase 2 [Brucella melitensis bv. 1 str. Rev.1]
 gi|263092749|gb|EEZ16958.1| orn/DAP/Arg decarboxylase [Brucella melitensis bv. 2 str. 63/9]
 gi|326410285|gb|ADZ67349.1| Lysine/ornithine decarboxylase [Brucella melitensis M28]
 gi|326553578|gb|ADZ88217.1| Lysine/ornithine decarboxylase [Brucella melitensis M5-90]
          Length = 377

 Score =  156 bits (394), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 52/357 (14%), Positives = 112/357 (31%), Gaps = 29/357 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   +  N          +  ++  A+K   A  +   L        ++S+ E+ 
Sbjct: 18  PCLVVDTDVVRENYQGFEKALPYS--RIFYAVKANPAPEILRLLASLGSSFDTASVAEIE 75

Query: 65  LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +  E     +  +Y      +     A          + V ++ K    A     ++  R
Sbjct: 76  MALEAGATPDRISYGNTIKKERDIARAFDLGIRLYAVDCVEEVEKIARVA--PGSRVFCR 133

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +      +K+ L+        + +    + ++   +  G+ FH   +      +   L +
Sbjct: 134 VLTDGEGAKWPLSRKFGCVPAMAKDVLRRAKALGLDAYGVSFHVGSQQTDLTAWDRALAD 193

Query: 182 IEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLE 232
               F         +  +++GGG                      L         +  +E
Sbjct: 194 AAAVFRTLADEGIILRMVNMGGGFPTRYLKDVPTAQAYGMAIFDALSRHFGNRIPETIIE 253

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPN 284
           PG  +V N   + T V+ +S    N  +    ++          + + + YQ   T +  
Sbjct: 254 PGRGMVGNAGVIKTEVVLVSRKADNDNVRWVYLDIGKFGGLAETMDEAIRYQ-IVTPHDG 312

Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337
           +     ++ G +C + D+  E   +     + IGD I  E    Y        FNG 
Sbjct: 313 SETEPCVLAGPTCDSADVLYEKTPYPLPVSLTIGDEILIEGTGAYTTTYSAVAFNGF 369


>gi|110635049|ref|YP_675257.1| ornithine decarboxylase [Mesorhizobium sp. BNC1]
 gi|110286033|gb|ABG64092.1| ornithine decarboxylase [Chelativorans sp. BNC1]
          Length = 377

 Score =  156 bits (393), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 47/357 (13%), Positives = 111/357 (31%), Gaps = 29/357 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   + +N             ++  A+K   A  +   L        ++S+ E+ 
Sbjct: 18  PCLVVDLDVVRDNYLAFERAL--PDSRIYYAVKANPAPQILRLLTSLGSSFDTASVAEIE 75

Query: 65  LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +        +  +Y      +     A          ++  ++ K    A     K+  R
Sbjct: 76  MALDAGATPDRISYGNTIKKERDIARAFALGIRLFAVDSTEEVEKISRAA--PGSKVFCR 133

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +    + +++ L+        +      + +       G+ FH   +      +   L +
Sbjct: 134 VLTDGAGAEWPLSRKFGCVPAMAVDVLRRAKQLGLEPYGVSFHVGSQQTDLSAWDRALSD 193

Query: 182 IEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLE 232
               F         +  +++GGG          +           L++       +  +E
Sbjct: 194 ARMVFAALADEGIVLRMVNMGGGFPTRYLRDVPEAQAYGQAIFSSLRKHFGNRIPETIIE 253

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPN 284
           PG  +V N   + + V+ IS+   N  +    ++          + + + Y        +
Sbjct: 254 PGRGMVGNAGVIKSEVVLISKKADNDNVRWVYLDIGKFGGLAETMDEAIRYPLVTRHDGS 313

Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337
                 ++ G +C + D+  E   +     + IGD +  E    Y     +  FNG 
Sbjct: 314 ETT-PCVLAGPTCDSADVLYEKTPYPLPVSLTIGDEVLIEGTGAYTTTYASVAFNGF 369


>gi|254433551|ref|ZP_05047059.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Nitrosococcus oceani AFC27]
 gi|207089884|gb|EDZ67155.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Nitrosococcus oceani AFC27]
          Length = 401

 Score =  156 bits (393), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 47/375 (12%), Positives = 108/375 (28%), Gaps = 34/375 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+Y  +++ +   +         + + +  ALK      +   +   +DG   +SL E+
Sbjct: 28  TPFYAYERRLISERIQHLRTHLP-SEIYIHYALKANPMPALAGHIAPLVDGLDVASLGEL 86

Query: 64  MLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            +  +     E+ ++      D E+ A L+   TI   +  ++ +    A+K  ++  + 
Sbjct: 87  RVALDTGTPPESISFAGPGKSDAELAASLAAGITINMESEGEMERIAHLAEKQGRRPRVA 146

Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKS--- 171
           +  + +   K             G   +        I +   +  G    +  +N     
Sbjct: 147 VRVNPNFELKTSGMKMAGGPKPFGVDAERVPAMLARINTLDLDFQGFHIFSGSQNLRAEA 206

Query: 172 -FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF---------CQRLKEF 221
                        +      T +  +++GGG                          K  
Sbjct: 207 IIEAQERTFTLALELARSAPTPVRLLNIGGGFGIPYFPGNKPLDLRPIADNLAASLPKLQ 266

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY--------- 272
            +    ++ LE G  +V         ++D   +  ++ ++ +    H             
Sbjct: 267 RQIPEAEVTLELGRYLVGEAGIYVCEIIDRKISRGHVFLITNGGLHHHLAASGNFGQVIR 326

Query: 273 -LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                        +    A V G  C   D+  +       + GD I       Y  +  
Sbjct: 327 KNYPVVVGNRIQGSTREIASVVGPLCTPLDLLADRMELAQAEAGDLIVVFQSGAYGRSAS 386

Query: 332 N-WFNGINMPTIAVK 345
              F    +P   + 
Sbjct: 387 PLGFLSHPVPAEVLV 401


>gi|77165424|ref|YP_343949.1| Orn/DAP/Arg decarboxylase 2 [Nitrosococcus oceani ATCC 19707]
 gi|76883738|gb|ABA58419.1| Orn/DAP/Arg decarboxylase 2 [Nitrosococcus oceani ATCC 19707]
          Length = 410

 Score =  156 bits (393), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 47/375 (12%), Positives = 108/375 (28%), Gaps = 34/375 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+Y  +++ +   +         + + +  ALK      +   +   +DG   +SL E+
Sbjct: 37  TPFYAYERRLISERIQHLRTHLP-SEIYIHYALKANPMPALAGHIAPLVDGLDVASLGEL 95

Query: 64  MLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            +  +     E+ ++      D E+ A L+   TI   +  ++ +    A+K  ++  + 
Sbjct: 96  RVALDTGTPPESISFAGPGKSDAELAASLAAGITINMESEGEMERIAHLAEKQGRRPRVA 155

Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKS--- 171
           +  + +   K             G   +        I +   +  G    +  +N     
Sbjct: 156 VRVNPNFELKTSGMKMAGGPKPFGVDAERVPAMLARINTLDLDFQGFHIFSGSQNLRAEA 215

Query: 172 -FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF---------CQRLKEF 221
                        +      T +  +++GGG                          K  
Sbjct: 216 IIEAQERTFTLALELARSAPTPVRLLNIGGGFGIPYFPGNKPLDLRPIADNLAASLPKLQ 275

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY--------- 272
            +    ++ LE G  +V         ++D   +  ++ ++ +    H             
Sbjct: 276 RQIPEAEVTLELGRYLVGEAGIYVCEIIDRKISRGHVFLITNGGLHHHLAASGNFGQVIR 335

Query: 273 -LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                        +    A V G  C   D+  +       + GD I       Y  +  
Sbjct: 336 KNYPVVVGNRIQGSTREIASVVGPLCTPLDLLADRMELAQAEAGDLIVVFQSGAYGRSAS 395

Query: 332 N-WFNGINMPTIAVK 345
              F    +P   + 
Sbjct: 396 PLGFLSHPVPAEVLV 410


>gi|209151020|gb|ACI33056.1| Ornithine decarboxylase 1 [Salmo salar]
          Length = 455

 Score =  156 bits (393), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 58/371 (15%), Positives = 108/371 (29%), Gaps = 34/371 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       + R    V    A+KC  +  +  TL     G   +S  E+ +
Sbjct: 37  FYVCDLGDVLK--KHMRWARAMPRVTPFYAVKCNDSRAVVTTLASLNAGFDCASKTEIQI 94

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       Y    K        S     +    S +   K        K+ LRI  
Sbjct: 95  VQSLGVDANRIIYANPCKQVSQIKYASAHGVQMMTFDSDVELMKVARYHDDAKLVLRIAT 154

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++ +    +V G+ FH          +S  + +   
Sbjct: 155 DDSKAVCRLSVKFGATLKACRGLLERAKELGLDVIGVSFHVGSGCTDPDTYSQAISDARC 214

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     ++I  EPG 
Sbjct: 215 VFDMGAEVGFNMTLLDIGGGFPGSEDTKLKFEEITAVINPALDKYFPADSGIRIIAEPGR 274

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVE-----AHVPDYL-----------LYQESA 279
             V +  TL   ++     +      D   +       +                     
Sbjct: 275 YYVASAYTLAVNIIAKKVIMNEQSASDEDDDWTSDRTLMYYVNDGVYGSFNCILYDHAHP 334

Query: 280 TIYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
               +  P      Y   + G +C   D   E      +++G+ + FE++  Y +   + 
Sbjct: 335 LPTLHKKPKPDERMYPCSIWGPTCDGLDRIAEVCTLPDMQVGEWLLFENMGAYTVAASST 394

Query: 334 FNGINMPTIAV 344
           FNG   P I  
Sbjct: 395 FNGFQKPDIYY 405


>gi|149374378|ref|ZP_01892152.1| putative diaminopimelate decarboxylase protein [Marinobacter
           algicola DG893]
 gi|149361081|gb|EDM49531.1| putative diaminopimelate decarboxylase protein [Marinobacter
           algicola DG893]
          Length = 398

 Score =  156 bits (393), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 50/375 (13%), Positives = 102/375 (27%), Gaps = 35/375 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            Y+ D  +L N     +      G ++  A K   A  +   L  ++ G   +S  E+  
Sbjct: 25  AYVYDLPELRNRAQNIVGCLP-PGCEMFYAAKANPALPVLSALASFVHGFEVASGGELDW 83

Query: 66  GHEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
               F   +  +    K       A+  N + I   ++ +L +  D A +      + + 
Sbjct: 84  VRRHFPDTSVIFGGPGKLASDLEKAIDQNVELIHVESLLELQRLCDIAGRRQANQDILLR 143

Query: 124 PSVS---------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN----K 170
            ++              +        + + +            + G  FH         +
Sbjct: 144 INLELADTPSTRLTMGGVPTPFGMEEACIPDALALLARQGRVRLRGFHFHLMSHQLDEKR 203

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK------ 224
                   L+ +      +   +  I++GGGI         +          ++      
Sbjct: 204 HLTLIKHYLETVRTWEAQYGLSLTEINVGGGIGINYTQPDQQFDWSGFCTGLDELLQAYV 263

Query: 225 -YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI-- 281
             + +I  E G  I          VLD+    +    V      H         +     
Sbjct: 264 DRAWRIRFECGRFITAPCGYYVGEVLDVKRCGEEWFAVCRGGTHHFRTPAAQAHNHPFDI 323

Query: 282 ---------YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                     P    ++  + G+ C   D+F        + +GD + F     Y  N  +
Sbjct: 324 LPTNNTDAATPCVTDHSVTLVGQLCTPKDVFARQVHIASLGVGDLVVFRYAGAYAWNISH 383

Query: 333 W-FNGINMPTIAVKN 346
             F     P      
Sbjct: 384 QAFLMHPHPEEYFIE 398


>gi|226943361|ref|YP_002798434.1| Ornithine decarboxylase [Azotobacter vinelandii DJ]
 gi|226718288|gb|ACO77459.1| Ornithine decarboxylase [Azotobacter vinelandii DJ]
          Length = 387

 Score =  156 bits (393), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 56/361 (15%), Positives = 116/361 (32%), Gaps = 30/361 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+ +ID + + N  +           ++  A+K   A  +   L         +S YE
Sbjct: 25  ETPFVVIDTEIIANAYEELGDCF--PFARIYYAVKANPAVEIIRLLRDKGSNFDIASRYE 82

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +     E  G E  +Y    K  +               ++ + L      A      + 
Sbjct: 83  LDKVMAEGVGPERVSYGNTIKKAKDIRYFYEKGVRLFATDSEADLRNIAKAAPGSKVYVR 142

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177
           +    + S          +   +        I +    +   GL FH   + +    + A
Sbjct: 143 ILTEGTASA---DWPLSRKFGCQPDMALDLMILARQLGLVPYGLSFHVGSQQRDIDVWDA 199

Query: 178 MLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSV 227
           ++  ++  F         +++ I++GGG                ++  + LKE   +   
Sbjct: 200 VIAKVKVIFERLKQEDGIELKMINMGGGFPANYITKTNSLQTYAEEIIRFLKEDFGEELP 259

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIY 282
           +I LEPG +++ N   L + V+ +S        + +          +       +     
Sbjct: 260 EIILEPGRSLIANAGILVSEVVLVSRKSRTAVERWVYTDVGKFSGLIETMDEAIKYPIWT 319

Query: 283 PNTGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337
              G     ++ G +C + DI  E +       +  GDR+ +     Y  +     FNG 
Sbjct: 320 EKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLASGDRLYWLSTGAYTTSYSAVEFNGF 379

Query: 338 N 338
            
Sbjct: 380 P 380


>gi|330981825|gb|EGH79928.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. aptata str.
           DSM 50252]
          Length = 402

 Score =  156 bits (393), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 58/385 (15%), Positives = 123/385 (31%), Gaps = 35/385 (9%)

Query: 2   IKT-PY--YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
           ++T P   ++ D   L  ++   +     AGV+L  A+K  +   M +T+   + G   S
Sbjct: 18  LETDPLAAFVYDLDALQQHVSEVMAALP-AGVELYYAIKANSEALMLETIAPLVSGFEIS 76

Query: 59  SLYEVMLGHEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
           S  E+         + + ++     D ++ + L N    I   +++++ + +  A++  +
Sbjct: 77  SGGEIERVMACPTRKPYVFSGPGKLDSDLRSALLNKVEAIHLESLNEIARLQQLAEQAGR 136

Query: 117 KIGLRINPSVS---------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
              + +  +                        + L E  +    +    + G   H   
Sbjct: 137 VQPVFLRINPQLPAAQSSRLAMAGTATPFGIDEADLAEAVRRVDNASHLMLKGFHVHAMS 196

Query: 168 ENKSFLCFSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRL 218
              S      +L    + +  +        Q+   ++GGGI       + +  +  C+ L
Sbjct: 197 HQMSVERHEQLLDFYLQRWQEWKALARDPGQLTHFNVGGGIGVDYLNSQQFDWQRLCRYL 256

Query: 219 KEFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLY 275
           ++   +      L  EPG  I          VLD   +     +V               
Sbjct: 257 EKRLGEQHDAPILRFEPGRFISAYCGYYAIEVLDSKTSHGEHFLVCRGGTHQFRLPVAQS 316

Query: 276 QESATIYPNTGPYT-------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
            +   I+  T P +         + G+ C   D+       K V IGD +       Y  
Sbjct: 317 HDHPVIHLPTAPQSTESSEQAYTIVGQLCTPKDVLSRRQPLKGVNIGDLLVLPLAGAYGY 376

Query: 329 NRKN-WFNGINMPTIAVKNVDGTIK 352
           N  +  F     P+         ++
Sbjct: 377 NISHADFLCHPRPSQHFVRNGERVR 401


>gi|169601550|ref|XP_001794197.1| hypothetical protein SNOG_03643 [Phaeosphaeria nodorum SN15]
 gi|5921568|emb|CAB56523.1| ornithine decarboxylase [Phaeosphaeria nodorum]
 gi|160705959|gb|EAT88848.2| hypothetical protein SNOG_03643 [Phaeosphaeria nodorum SN15]
          Length = 445

 Score =  156 bits (393), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 57/361 (15%), Positives = 102/361 (28%), Gaps = 31/361 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++               VK   A+KC     +   +++   G   +S  E+  
Sbjct: 66  FFIADLGEVYRQHLRWKKNLAR--VKPHYAVKCNPDTQVLRLMSELGMGFDCASKNEIET 123

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             +         Y    K        +N         +    +K K      ++ LRI  
Sbjct: 124 VLKLGVDPARIIYAQPCKTKSYVRYAANSGVKQMTFDNADELYKTKQLFPDAELYLRILT 183

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S S   L+           +  +       NV G+ FH          F   +++   
Sbjct: 184 DDSGSLCRLSQKFGASLDTTAELLELAHKLELNVVGVAFHVGSGASDPKAFIKAVQDARF 243

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            F     F   +  + +GGG        P+        +      +++  EPG   V+  
Sbjct: 244 VFDQAAAFGFDMHTLDVGGGFTGDITFEPMAAVLSASLDEYFPPHIRVIGEPGRYYVSTA 303

Query: 242 TTLNTTVLD---------------ISENIKNLVIVDSSVEAHVPDYL---------LYQE 277
            T+   V+                +  N        S +  H              LY  
Sbjct: 304 FTIACHVIARRTVADATLGTTSYMLYLNDGVYGNFSSIIFDHQHPVPRVLKSGNDVLYDV 363

Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNG 336
             + Y         + G +C   DI          + +GD + FED+  Y       FNG
Sbjct: 364 RTSGYDTPSQVEYSIWGPTCDGIDIISSSCSFPELLDVGDWLYFEDMGAYTKCSATKFNG 423

Query: 337 I 337
            
Sbjct: 424 F 424


>gi|255658079|ref|ZP_05403488.1| lysine/ornithine decarboxylase [Mitsuokella multacida DSM 20544]
 gi|260849844|gb|EEX69851.1| lysine/ornithine decarboxylase [Mitsuokella multacida DSM 20544]
          Length = 399

 Score =  155 bits (392), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 59/370 (15%), Positives = 107/370 (28%), Gaps = 23/370 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP+ ++   K+  N          AG  +  A+K        + L         +S  E
Sbjct: 19  PTPFLVLSVDKVAENYAFLRKHLPRAG--IYYAIKANPHPRALERLAALGSHFDVASAGE 76

Query: 63  V-MLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + ML      G    Y     D      A         F+  S++ K    A      + 
Sbjct: 77  MEMLHAAGVDGSRMIYANPVHDARGFAAASRFGVKRFTFDDESEIPKLAAAAPGADVLVR 136

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           ++++ S +             S L      K E    +  G+ FH   ++ S   +   L
Sbjct: 137 VQVHNSKALVDLNTKFGAPLGSALP--LLRKAEQAGLHAKGICFHVGSQSLSTAAYEEAL 194

Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKYSVQI--YL 231
             +   F         +  + +GGG            +    + +    E+   Q   + 
Sbjct: 195 LLVHHLFLEAEASGMHLTDLDIGGGFPIPSAEGLHVDLAAMLEAINRQLERLFPQTAVWT 254

Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTG 286
           EPG  +      L T+V+   +       +            + D+  Y      + N  
Sbjct: 255 EPGRFLCGTAMNLVTSVIGTKQRGTFPWYILDEGIYGVFSGILFDHWTYPLH--CFGNGA 312

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
              ++  G SC   D+         + IG  +   D+  Y       FNG   P   +  
Sbjct: 313 KTPSVFAGPSCDGIDVLYRDFPAPKLPIGANVLVSDIGAYTTVSATRFNGFE-PAAVLVW 371

Query: 347 VDGTIKAIRE 356
            D      + 
Sbjct: 372 EDQADLVAKR 381


>gi|194671181|ref|XP_001256848.2| PREDICTED: ornithine decarboxylase-like, partial [Bos taurus]
          Length = 420

 Score =  155 bits (392), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 66/382 (17%), Positives = 116/382 (30%), Gaps = 36/382 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       +++    V    A+KC  +  +  TL     G   +S  E+ L
Sbjct: 40  FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSRTIVKTLAAIGTGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        +N    +    S++   K        K+ LRI  
Sbjct: 98  VQSLGVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++ +    +V G+ FH          F   + +   
Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELDIDVIGVSFHVGSGCTDPETFVQAISDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     V+I  EPG 
Sbjct: 218 VFDMGAEVGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPSDSGVRIIAEPGR 277

Query: 236 AIVTNTTTLNTTVL-------------------DISENIKNLVIVDSSVEAHVPDYLLYQ 276
             V +  TL   ++                   D +        V  S    + D+   +
Sbjct: 278 YYVASAFTLAVNIIAKKLVLKEQTGSDDEEESTDRTFMYYVNDGVYGSFNCILYDHAHVK 337

Query: 277 -----ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                      P+   Y++ + G +C   D   E         GD + FE++  Y +   
Sbjct: 338 PLLQKYLPNTQPDEKYYSSSIWGPTCDGLDRIDERCNLLRCMWGDWMLFENMGAYTVAAA 397

Query: 332 NWFNGINMPTIAVKNVDGTIKA 353
           + FNG   PTI       T   
Sbjct: 398 STFNGFQRPTIYYVMSGPTWLV 419


>gi|91790607|ref|YP_551559.1| Orn/DAP/Arg decarboxylase 2 [Polaromonas sp. JS666]
 gi|91699832|gb|ABE46661.1| Orn/DAP/Arg decarboxylase 2 [Polaromonas sp. JS666]
          Length = 408

 Score =  155 bits (392), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 59/375 (15%), Positives = 111/375 (29%), Gaps = 36/375 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            Y+ D + L  +    +     AG +L  A+K  +   +  TL   + G   SS  E+  
Sbjct: 25  AYVYDLEALRRHSQAVVAALP-AGCELFYAIKANSDLPILRTLAPRVAGFEVSSGGELAW 83

Query: 66  GHEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK--KIGLR 121
             E F      ++   K      +  + D   I   ++ +L +    A+   +   + LR
Sbjct: 84  VREHFPSTPLIFSGPGKTDAELRLALDSDVEAIHVESLHELRRLAWLAEAAGRTAPVLLR 143

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENK---- 170
           +N  +              +  G              E+    + G  FH          
Sbjct: 144 VNLPLPGLAATTLMMGGKATPFGIAVDQLPACLASLREAPGLRLRGFHFHLLSHQLDAAA 203

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS---- 226
                +A L+ +E+  G +   I+ +++GGGI    +    +          ++      
Sbjct: 204 HVELIAAYLEQVERWCGAYGLDIDHVNVGGGIGVNYRQPQQQFDLAAFGAGLQRLRASRP 263

Query: 227 --VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL----------- 273
              ++  E G  I          VLD+        +V      H                
Sbjct: 264 GLPRLRFECGRYITAACGYYAMQVLDLKHTFGRDYVVARGGTHHFRTPYAQGHSHPFHVL 323

Query: 274 --LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
              +       P     T  V G+ C   D+       + V++GD + F     Y  +  
Sbjct: 324 PVEHWPYPWARPELRDATVHVVGQLCTPKDLLAFDAPVERVRVGDLLVFPYAGAYAWHIS 383

Query: 332 NW-FNGINMPTIAVK 345
           +  F     P     
Sbjct: 384 HHDFLRHPHPQHWYL 398


>gi|290960696|ref|YP_003491878.1| pyridoxal-dependent decarboxylase [Streptomyces scabiei 87.22]
 gi|260650222|emb|CBG73338.1| putative pyridoxal-dependent decarboxylase [Streptomyces scabiei
           87.22]
          Length = 541

 Score =  155 bits (392), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 54/399 (13%), Positives = 106/399 (26%), Gaps = 46/399 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+ D  ++   L+           ++  +LK  +   +   L +       +S  E
Sbjct: 25  GSPLYVYDLARVRTALEDLRAALPQP-SRVYYSLKANSHPDLVAELRRGGARAEVTSRGE 83

Query: 63  VMLGHEKFGG--ETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKL-HKKI 118
           +    E      E           E  +A+ +   T    +   L++    A        
Sbjct: 84  LAAALEAGHPAAELMYSGPGKVPAELDEAIAAGMRTFSAESFGDLDRIGAAADAHGVTAD 143

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172
            +    +               S+ G    D       +  +   + G+ F      +  
Sbjct: 144 CVLRINAAGAPGEGGLRMTGGPSQFGFDLDDLTAHGARLLVKGVRIIGMHFFPLTNARDE 203

Query: 173 LCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK 224
               A L    +            +  + LGGG         +          L    ++
Sbjct: 204 DGLLAELAQSVRTAASLRDELGIPLHLLDLGGGFAAPYATPGERPAYPGLRSALSAVLDE 263

Query: 225 YSVQI-------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-------- 269
                         E G  +V +   L +TV D+  +  N   V  +   H+        
Sbjct: 264 SLPGWRDGEPVVAFESGRYLVGDCGRLVSTVTDVKNSRGNTYAVLDAGINHLGGLSGLGR 323

Query: 270 ------PDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323
                         +     +  P    + G  C   DI         ++ GD ++F +V
Sbjct: 324 LLPLSARPLSGPGPATDEVGDREPAFVTLAGPLCTPADILARAADLPGLRPGDLLAFPNV 383

Query: 324 AGYNINRK-NWFNGINMPTIAVKNVD-----GTIKAIRE 356
             Y ++     F G   P   V +       G +   R 
Sbjct: 384 GAYGLSASLLGFLGHPAPAELVVDGGETVSAGRLALRRH 422


>gi|146305836|ref|YP_001186301.1| ornithine decarboxylase [Pseudomonas mendocina ymp]
 gi|145574037|gb|ABP83569.1| ornithine decarboxylase [Pseudomonas mendocina ymp]
          Length = 387

 Score =  155 bits (392), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 54/361 (14%), Positives = 117/361 (32%), Gaps = 30/361 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+ +ID+Q + +  D           K+  A+K   A  + + L         +S+YE
Sbjct: 25  ETPFVVIDRQIISDAYDQLGNCF--PFAKIYYAVKANPAVEIIELLRDKGSSFDIASIYE 82

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +        G E  +Y    K                  ++ + L      A      + 
Sbjct: 83  LDKVMATGVGPERISYGNTIKKSRDIRYFFDKGVRLFATDSEADLRNIAKAAPGSKIYVR 142

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177
           +    S S          +   +        I ++   +   G+ FH   + +    + A
Sbjct: 143 ILTEGSTSA---DWPLSRKFGCQPDMALDLLILAKQLGLVPYGISFHVGSQQRDIDVWDA 199

Query: 178 MLKNIEKEF----GHFITQIEWISLGGGIHFTD--KDYPVKDFCQRL----KEFSEKYSV 227
            +  ++  F          ++ I++GGG       +   ++ + + +    KE       
Sbjct: 200 AIAKVKVIFERLREEDGITLQMINMGGGFPANYIQRTNDLETYAEEITRFLKEDFGDDLP 259

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIY 282
           +I LEPG +++ N   L + V+ ++        + +          +       +     
Sbjct: 260 EIILEPGRSLIANAGVLVSEVVLVARKSRTAVERWVYADVGKFSGLIETMDESIKFPIWT 319

Query: 283 PNTGP-YTAMVCGRSCLAGDIF---GEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337
              G     ++ G +C + DI     ++     +  GDR+ +     Y  +     FNG 
Sbjct: 320 EKKGEMEEVVIAGPTCDSADIMYEHYKYGLPLNLASGDRLYWLSTGAYTTSYSAVEFNGF 379

Query: 338 N 338
            
Sbjct: 380 P 380


>gi|332298614|ref|YP_004440536.1| Ornithine decarboxylase [Treponema brennaborense DSM 12168]
 gi|332181717|gb|AEE17405.1| Ornithine decarboxylase [Treponema brennaborense DSM 12168]
          Length = 390

 Score =  155 bits (392), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 51/373 (13%), Positives = 117/373 (31%), Gaps = 33/373 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TP  +++ + +  N          A   +  A+K   A  +   +NQ       +S Y
Sbjct: 23  LETPCIVVNLRTIKKNYIKLQNSFPFAA--IYYAVKANPANEVISLVNQLGGNFDIASRY 80

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+          +  +Y    K  +  A            ++   L      A      +
Sbjct: 81  ELDQVLALGISPDRISYGNTIKKAKDIAYFYEKGVRMFATDSKEDLKNIAKYAPGSRIYV 140

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFS 176
            + +  S +          +            ++S    +   G+ FH   + +    ++
Sbjct: 141 RILVENSATA---DWPLSRKFGCHPDMAYDLLVQSRDSGLTPYGISFHVGSQQRDIGQWN 197

Query: 177 AMLKNIEKEF----GHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSE----KYS 226
             +   +  F         ++  I++GGG   +       + ++   +  +         
Sbjct: 198 DAIAKTKYLFTALEEEENIRLSMINMGGGFPASYVQPTNDLSEYASEITRYLHDDFGDNV 257

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATI 281
            QI LEPG ++V ++  L + V+ IS        + + +        +       +   +
Sbjct: 258 PQIILEPGRSLVGDSGILVSEVVLISRKNNTALYRWVYLDTGKFNGLIETLGESIKYPVL 317

Query: 282 YPNT----GPYTAMVCGRSCLAGDIFG---EFHFEKPVKIGDRISFEDVAGYNINRKNW- 333
                        ++ G +C + DI     ++     +KIGDR+       Y  +  +  
Sbjct: 318 TEKDDPSAKEGEVILAGPTCDSMDIIYEDFKYKLPLDLKIGDRVYVLSAGAYTASYASVC 377

Query: 334 FNGINMPTIAVKN 346
           FNG         +
Sbjct: 378 FNGFPPLKTYFMD 390


>gi|307130373|ref|YP_003882389.1| diaminopimelate decarboxylase [Dickeya dadantii 3937]
 gi|306527902|gb|ADM97832.1| Diaminopimelate decarboxylase [Dickeya dadantii 3937]
          Length = 411

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 50/375 (13%), Positives = 101/375 (26%), Gaps = 32/375 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            ++ D   L  ++   +      GV+L  A+K  +   + D +   + G   SS  E+  
Sbjct: 25  AFVYDLTALRQHVSEVMAALP-PGVELYYAIKANSEKPILDAIAPLVHGFEISSGGEIAR 83

Query: 66  GHEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                  +   ++           A+    + +   +  ++ + + +A++      + I 
Sbjct: 84  VAGCGTRKPFVFSGPGKLDSDFDLALEQGVEAVHVESRHEIARLQQRARQHGVVQPVFIR 143

Query: 124 PSVS---------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174
            +                        + L +  +D   +    + G   H          
Sbjct: 144 VNPELASSLTSKLAMAGTPTPFGMDEADLADAVRDVDNASHLQLKGFHVHAMSHQMVVAR 203

Query: 175 FSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKY 225
              +L      +  +         I  +++GGGI       + +     C  L+    + 
Sbjct: 204 HQQLLDLYLTRWPQWKALSAHPQHITHLNVGGGIGVPYLTPERFDWPALCDYLRTRLAQQ 263

Query: 226 SVQIY--LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282
                   EPG  I          VLD   +     +V                +   I+
Sbjct: 264 PDAPIVRFEPGRFISAYCGYYAIEVLDKKRSHGKHFLVCRGGTHQFRLPVAQGHDHPVIH 323

Query: 283 -------PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WF 334
                           V G+ C   D+         V IGD +       Y  N  +  F
Sbjct: 324 LPLTSAPTTGETRDWTVVGQLCTPKDVLSRDQRLTDVNIGDLLVLPLAGAYGYNISHADF 383

Query: 335 NGINMPTIAVKNVDG 349
                P       DG
Sbjct: 384 LCHPRPGQYFTTEDG 398


>gi|195551415|ref|XP_002076223.1| GD15360 [Drosophila simulans]
 gi|194201872|gb|EDX15448.1| GD15360 [Drosophila simulans]
          Length = 394

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 57/357 (15%), Positives = 104/357 (29%), Gaps = 23/357 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
             + D   +   L     +     +K   A+KC     +   L Q   G   +S  EV L
Sbjct: 33  LNICDLSSVERKLRLWQKLLPR--IKPFYAVKCNDDPMVVRLLAQLGAGFDCASKNEVKL 90

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   +    +                   ++   +K      +  + +R   
Sbjct: 91  VLGFDVSPERIIFANPCRPVSHLEYAKEHRVSNGTVDNEFEVYKLHTHYPNSNLIVRFKS 150

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKI-ESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
               ++  L D     + +       + +S    V G  FH          +   +K  +
Sbjct: 151 EAKEAQCPLGDKFGCDADVDAAALMLLAKSLELKVTGTSFHVGSGCSELEAYDRAIKKAK 210

Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEKYSVQIYLEPGEAI 237
             F         ++++ +GGG   +D     K        ++       VQI  EPG   
Sbjct: 211 NLFKFGALLGYDMDFLDIGGGFPGSDDGKFEKIAESVNTSVQRHFPDERVQIIAEPGRFF 270

Query: 238 VTNTTTLNTTVLDISE-----------NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286
           V    TL   +    E                  V  S    + D+ +      +     
Sbjct: 271 VAAACTLVCKIHAKREIRNEAGKLDTVMYYLNDGVYGSFNCILYDHQVVTAEHYLDNAES 330

Query: 287 PY--TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                +++ G SC A D   E      +  GD + F ++  Y +   + FNG  +P 
Sbjct: 331 LPHLKSLIWGPSCDALDKISEDLHLPNLNRGDLLGFRNMGAYTMPIASPFNGFEVPK 387


>gi|257056451|ref|YP_003134283.1| ornithine decarboxylase [Saccharomonospora viridis DSM 43017]
 gi|256586323|gb|ACU97456.1| ornithine decarboxylase [Saccharomonospora viridis DSM 43017]
          Length = 389

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 49/360 (13%), Positives = 107/360 (29%), Gaps = 30/360 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP  ++D   +++               +  A+K      +   L         +S  E
Sbjct: 18  PTPCLVVDIDTVIDRYSRFTEAF--PDAHVQYAVKANPHPAVVRALVDAGAAFDVASPGE 75

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + L  E     +T +Y    K     A           F+  S L+     A      + 
Sbjct: 76  IDLCVEAGARPDTLSYGNTIKKPSDIAHAHAAGVREYTFDARSDLDNIARHAPGAQVSVR 135

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177
           L +              N+      +  +  + +    +   G+ FH   +      +  
Sbjct: 136 LLVEGGPDSVT---PFGNKFGCNTDDAVRMLLRAAESGLEPVGVSFHVGSQQLEPAAWDL 192

Query: 178 MLKNIEKEF---GHFITQIEWISLGGGIHFTDKD--YPVKDFCQRLKEFSEKYSVQI--- 229
            + +  K F         +  +++GGG      D   P+  +   +      +  +    
Sbjct: 193 AVASAAKVFAGVAEHGVTLRRLNVGGGFGVDYIDTAPPMSAYADTILSAVRSHFPEPPEL 252

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVI--------VDSSVEAHVPDYLLYQESATI 281
             EPG A+V     + + V+ ++                  + +     + + Y+     
Sbjct: 253 VCEPGRALVAEAGMIRSEVVVVARKHPTDEHRWVYLDIGRYNGLAETENEAIAYRLVPVG 312

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337
             +      ++ G +C   D+  +   +     ++ GDRI       Y  +  +  FNGI
Sbjct: 313 THSQEDGPVIIAGPTCDGDDVLYQRTPYRLPLSLEPGDRIDILASGAYTASYSSVAFNGI 372


>gi|206889745|ref|YP_002249553.1| ornithine decarboxylase [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206741683|gb|ACI20740.1| ornithine decarboxylase [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 372

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 55/355 (15%), Positives = 125/355 (35%), Gaps = 20/355 (5%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           PY L+D++ L   +       KN+  K+  A+K      +   LN +  G   +S  E+ 
Sbjct: 24  PYLLLDREILKEKISLIGRGIKNS--KVFYAVKANPDIDVIRYLNSFNVGFEIASEGELA 81

Query: 65  LGHE-KFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +  +     E    +   K  +   +AV    +   F++++++ K      +    + L 
Sbjct: 82  ILKQLNVEPERIITSNPVKTFKFLKEAVEYGIEYYAFDSIAEVEKLAKYTPRKKVYVRLT 141

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFS--- 176
           +    S               + E  +  I ++ + ++  G+ FH   +  +   +    
Sbjct: 142 VPNEGSEWPLSKKF----GVEMEEAAQLLIYAKQRGLDPIGITFHVGSQCSNVYNWHTAI 197

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYSVQ--IYLE 232
                +++       +I+ +++GGG       K   ++    ++    E+Y     I++E
Sbjct: 198 HKAGQLKELVRKNGIEIKMLNIGGGYPIEYTKKVPSIETIETKINSILEEYFPDTEIFIE 257

Query: 233 PGEAIVTNTTTLNTTVLDISEN--IKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA 290
           PG A+V +     + ++  ++      L I        +      +    +         
Sbjct: 258 PGRAVVGDAGVFVSRIIGKAQRGDENWLYIDVGVFNGLMESIGGIKYQYIVGSRGEEKEW 317

Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
            + G SC + D+           +G  I       Y I+  + FNG + P   + 
Sbjct: 318 TIAGPSCDSFDVIDREVVLPEPDVGSLILILSAGAYTISYASEFNGFSTPKTFLI 372


>gi|56477868|ref|YP_159457.1| ornithine/diaminopimelate/arginine decarboxylase,family protein
           [Aromatoleum aromaticum EbN1]
 gi|56313911|emb|CAI08556.1| Ornithine/diaminopimelate/arginine decarboxylase, family 2
           [Aromatoleum aromaticum EbN1]
          Length = 416

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 50/374 (13%), Positives = 102/374 (27%), Gaps = 34/374 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+Y  D+  L   +           V+L  A+K      +   + + +DG   +S  E+
Sbjct: 43  TPFYAYDRGLLTQRVSELRTALPRE-VRLHYAMKANPMPALVCHMAKLVDGIDVASAGEL 101

Query: 64  MLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            +  +     GE        +D E+   ++    +   +  ++      +  L     + 
Sbjct: 102 KVALDAGADPGEISFAGPGKQDAELQQSVAAGILVNLESFREIAPLVAASVALGLPARVA 161

Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK---- 170
           +  +     K           + G   +        I        G       +N     
Sbjct: 162 VRVNPDFELKSSGMKMGGGPKQFGVDAEQVPQLLAEIGRAGLAFEGFHLFAGSQNLKAEA 221

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK--------DFCQRLKEFS 222
                    +   +   H    +++++LGGG          +        +    + E +
Sbjct: 222 IVEAQRKSFELALRLAEHAPAPVKFLNLGGGFGIPYFPGEQRLELAPIGDNLAALVAEAA 281

Query: 223 EKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY--------- 272
            K    Q+ +E G  +V         V+D   +  +  +V      H             
Sbjct: 282 RKLPQAQLVIELGRYLVGEAGIYVCRVIDKKVSRGHTYLVTDGGLHHHLSASGNFGQVIR 341

Query: 273 -LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                       +       V G  C   D+ GE      V+ GD +       Y  +  
Sbjct: 342 KNYPVAIGNRMGDAATENYSVVGPLCTPLDLLGEKINLPQVQPGDLVVIHQSGAYGASAS 401

Query: 332 -NWFNGINMPTIAV 344
              F G       +
Sbjct: 402 PTGFLGHPEIIEIL 415


>gi|326504166|dbj|BAK02869.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 457

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 60/356 (16%), Positives = 112/356 (31%), Gaps = 24/356 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P++ +D + + N      ++     V    A+KC     +   L     G   +S  E+ 
Sbjct: 37  PFFAVDLEDICN--KHIRWLTSMPRVTPHYAIKCNDDINVIKLLAYLGAGFDCASKGEIK 94

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
              +     +   Y    K              +    ++    K K    + K+ LR+ 
Sbjct: 95  KVMDLGVSADRIIYANPCKQSSYIRYAHEVGVDVMTFDNEQELLKIKQCHSNAKLVLRLV 154

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS---FLCFSAMLK 180
              S +    +           K  DK +     + G+ FH      +   F+      +
Sbjct: 155 TDDSNAVCRFSMKFGADMNTARKLIDKAQELDMEIIGVSFHCGSGQMTSKAFVDAIQNAR 214

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ------RLKEFSEKYSVQIYLEPG 234
            I          ++ + LGGG                       + F E  +V+I  EPG
Sbjct: 215 MIMNYGNKLGFTMKLLDLGGGFPGNTGTEEYFAEIASAVNATIDEHFPENENVRIIAEPG 274

Query: 235 EAIVTNTTTLNTTVLD-----------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
              V +  TL T V+            +         V  S    + D+ + +       
Sbjct: 275 RYYVASAYTLATNVIASREMIDPETGAVKYMYYINDGVYGSFNCVLYDHYVPEPCLFDKN 334

Query: 284 NTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +   YT+ + G +C   D          ++IGD I ++++  Y I+    FNG+ 
Sbjct: 335 KSNDSYTSSIWGPTCDGLDCIQTSIQLPKLEIGDWIYWKNMGAYTISAAVQFNGLP 390


>gi|225679753|gb|EEH18037.1| ornithine decarboxylase [Paracoccidioides brasiliensis Pb03]
 gi|226291506|gb|EEH46934.1| ornithine decarboxylase [Paracoccidioides brasiliensis Pb18]
          Length = 448

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 105/360 (29%), Gaps = 32/360 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y+ D  ++               VK   A+KC     +   + Q  +G   +S  E+ 
Sbjct: 69  PFYVADLGQVYRQHIRWKKNLGR--VKPFYAVKCNPDPQILRLMVQLGNGFDCASKAEID 126

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
              +         Y    K        S          +    +K K      ++ LRI 
Sbjct: 127 YALDVGVDPSRIIYAQPCKTKSFLRYASQVGVKQMTFDNSDELYKIKEMCPDAELYLRIL 186

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S S   L+        +     +  +    NV G+ FH     +    F   +++  
Sbjct: 187 TDDSASLCRLSMKFGASLSVARSLLELAKELKLNVIGVSFHVGSGAEDPKSFVKAVEDSR 246

Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
             F         ++ + +GGG      +         L E+   + ++I  EPG   V +
Sbjct: 247 FVFDQAAEVGFDLKVLDVGGGFSEDTFERFAATLSDALDEYFPPH-IRIIAEPGRYYVAS 305

Query: 241 TTTLNTTVLD----------------------ISENIKNLVIVDSSVEAHVPDYLLYQES 278
             TL   V+                       I  N        + +  H          
Sbjct: 306 AFTLAANVIARRDVSLEMSDSDSTAGATEAYMIYLNDGVYGNFSNIIFDHQHPVPQILTM 365

Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGI 337
            +      P    + G +C   D+  E       + +G+ + FE++  Y       FNG 
Sbjct: 366 ESRVC--APIEYSIWGPTCDGIDLICERIALPGALDVGNWLYFENMGAYTKCSATRFNGF 423


>gi|83773891|dbj|BAE64016.1| unnamed protein product [Aspergillus oryzae]
          Length = 449

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 61/369 (16%), Positives = 119/369 (32%), Gaps = 31/369 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+ + D +++    +  L       +    A+KC +   +   L +   G   +S  E+ 
Sbjct: 63  PFLVADTRRIFQQHERWLQCL--PNIAPFYAVKCNSNIRLLRYLARLGVGFDCASWGEMK 120

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           L            +    K      +   S      F+ V +L K KD A   + ++ LR
Sbjct: 121 LVLNLGVDPSRIIFAHPCKAVSALQMASRSGVPRTTFDNVDELEKIKDNA--PNLRLLLR 178

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           I      +   L +         +    K +     V+G+ FH      +   F   ++N
Sbjct: 179 IFADDDTALVSLGNKFGAPLDTTKALLLKAKDLGLVVDGVSFHVGSGASNADTFVTAVQN 238

Query: 182 IEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
            +  F         +  + +GGG   ++ +       + +++     +  +  EPG    
Sbjct: 239 AKHVFQQGKQLGFDMHVLDVGGGFQDSNFEPMALSLQRAIEKEFPPSTQVM-AEPGRYYA 297

Query: 239 TNTTTLNTTV-----------------LDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
            +  T    V                 L +++ I    +   +        L  QE+ + 
Sbjct: 298 RSFYTAACKVVARRKQIGQDKLSQSDMLYLNDGIYGCFMNAVAENEIYRPILFKQETTSS 357

Query: 282 YPNT-GPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGIN- 338
                G +   V G +C   D   +       VK+GD + FE++  Y       FNG   
Sbjct: 358 TEREAGEHRYSVWGPTCDGLDCIAKEATMGCEVKVGDWVKFENMGAYTTATSTQFNGFPN 417

Query: 339 MPTIAVKNV 347
              I   + 
Sbjct: 418 RYDIIYVDD 426


>gi|330958646|gb|EGH58906.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 402

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 61/377 (16%), Positives = 122/377 (32%), Gaps = 32/377 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            ++ D   L  ++   +     AGV+L  A+K  +   M +TL   + G   SS  E+  
Sbjct: 25  AFIYDLDALQQHVSEVMAALP-AGVELYYAIKANSEALMLETLAPLVSGFEISSGGEIER 83

Query: 66  GHEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKL--HKKIGLR 121
                  + + ++     D ++ + L N    +   +++++ + +  A++    + + +R
Sbjct: 84  VMACPTRKPYVFSGPGKLDSDLRSALLNKVEAVHLESLNEIQRLQHLAEEAGRVQPVFIR 143

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENKSFLC 174
           INP +  ++          +  G    D  ++           + G   H      S   
Sbjct: 144 INPQLPAAQSSKLAMAGTATPFGIDEADLADAVRLVDSATHLTLKGFHVHAMSHQMSVER 203

Query: 175 FSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKY 225
              +L    + +  +        Q+   ++GGGI         +  +  C+ LK+   + 
Sbjct: 204 HEQLLDFYLQRWQAWKALARYPEQLTHFNVGGGIGVDYLNNPQFDWQRLCRYLKKRLGEQ 263

Query: 226 SVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282
                L  EPG  I          VLD   +     +V                +   ++
Sbjct: 264 PDAPILRFEPGRFISAYCGYYVIEVLDRKTSHGEHFLVCRGGTHQFRLPVAQGHDHPVVH 323

Query: 283 PNTGPYT-------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WF 334
             + P T         V G+ C   D+       K V IGD +       Y  N  +  F
Sbjct: 324 LPSVPPTAASPEKVYTVVGQLCTPKDVLSRRRPFKDVSIGDLLVLPMAGAYGYNISHADF 383

Query: 335 NGINMPTIAVKNVDGTI 351
                P          +
Sbjct: 384 LCHPRPPQHFVRNGERV 400


>gi|254695245|ref|ZP_05157073.1| Orn/DAP/Arg decarboxylase, family 2 [Brucella abortus bv. 3 str.
           Tulya]
 gi|261215608|ref|ZP_05929889.1| orn/DAP/Arg decarboxylase 2 [Brucella abortus bv. 3 str. Tulya]
 gi|260917215|gb|EEX84076.1| orn/DAP/Arg decarboxylase 2 [Brucella abortus bv. 3 str. Tulya]
          Length = 377

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 51/357 (14%), Positives = 112/357 (31%), Gaps = 29/357 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   +  N          +  ++  A+K   A  +   L        ++S+ E+ 
Sbjct: 18  PCLVVDTDVVRENYQGFEKALPYS--RIFYAVKANPAPEILRLLASLGSSFDTASVAEIE 75

Query: 65  LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +  E     +  +Y      +     A          + V ++ K    A     ++  R
Sbjct: 76  MALEAGATPDRISYGNTIKKERDIARAFDLGIRLYAVDCVEEVEKIARVA--PGSRVFCR 133

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +      +++ L+        + +    + ++   +  G+ FH   +      +   L +
Sbjct: 134 VLTDGEGAEWPLSRKFGCVPAMAKDVLRRAKALGLDAYGVSFHVGSQQTDLTAWDRALAD 193

Query: 182 IEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLE 232
               F         +  +++GGG                      L         +  +E
Sbjct: 194 AAAVFRTLADEGIILCMVNMGGGFPTRYLKDVPTAQAYGMAIFDALSRHFGNRIPETIIE 253

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPN 284
           PG  +V N   + T V+ +S    N  +    ++          + + + YQ   T +  
Sbjct: 254 PGRGMVGNAGVIKTEVVLVSRKADNDNVRWVYLDIGKFGGLAETMDEAIRYQ-IVTPHDG 312

Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337
           +     ++ G +C + D+  E   +     + IGD I  E    Y        FNG 
Sbjct: 313 SETEPCVLAGPTCDSADVLYEKTPYPLPVSLTIGDEILIEGTGAYTTTYSAVAFNGF 369


>gi|298487275|ref|ZP_07005324.1| pyridoxal-dependent decarboxylase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298158299|gb|EFH99370.1| pyridoxal-dependent decarboxylase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 402

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 60/385 (15%), Positives = 121/385 (31%), Gaps = 35/385 (9%)

Query: 2   IKT-PY--YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
           ++T P   ++ D   L  ++   +     AGV+L  A+K  +   M +TL   + G   S
Sbjct: 18  LETDPLAAFVYDLDALQQHVTDVMAALP-AGVELYYAIKANSEALMLETLAPLVSGFEIS 76

Query: 59  SLYEVMLGHEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
           S  E+         + + ++     D ++ + L N    I   +++++ + +  A++  +
Sbjct: 77  SGGEIERVMACPTRKPYVFSGPGKLDSDLRSALLNKVEAIHLESLNEIARLQHLAEETGR 136

Query: 117 KIGLRINPSVS---------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
              + +  +                        + L E  +    +    + G   H   
Sbjct: 137 VQPVFLRINPQLPAAQSSKLAMAGTATPFGIDETDLAEAIRRLDGASHLTLKGFHVHAMS 196

Query: 168 ENKSFLCFSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRL 218
              S      +L    + +  +        Q+   ++GGGI       + +  +  C+ L
Sbjct: 197 HQMSVERHEQLLDFYLQRWQEWKALASYPEQLTHFNVGGGIGVDYLNSQQFDWQRLCRYL 256

Query: 219 KEFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLY 275
           ++   +      L  EPG  I          VLD   +     +V               
Sbjct: 257 EKRLGEQRDAPILRFEPGRFISAYCGYYAIEVLDSKTSHGEHFLVCRGGTHQFRLPVAQG 316

Query: 276 QESATIYPNTGPYT-------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
            +   I+    P T         V G+ C   D+       K V IGD +       Y  
Sbjct: 317 HDHPVIHVPCAPATGASEEQAYTVVGQLCTPKDVLSRQQPLKGVNIGDLLVLPLAGAYGY 376

Query: 329 NRKN-WFNGINMPTIAVKNVDGTIK 352
           N  +  F     P          ++
Sbjct: 377 NISHVDFLCHPRPIQHFVRNGERVR 401


>gi|330942902|gb|EGH45399.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 402

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 58/385 (15%), Positives = 122/385 (31%), Gaps = 35/385 (9%)

Query: 2   IKT-PY--YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
           ++T P   ++ D   L  ++   +     AGV+L  A+K  +   M +TL   + G   S
Sbjct: 18  LETDPLAAFVYDLDALQQHVSEVMAALP-AGVELYYAIKANSEALMLETLAPLVSGFEIS 76

Query: 59  SLYEVMLGHEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
           S  E+         + + ++     D ++ + L N    I   +++++ + +  A++  +
Sbjct: 77  SGGEIERVMACPTRKPYVFSGPGKLDSDLRSALLNKVEAIHLESLNEIARLQQLAEQAGR 136

Query: 117 KIGLRINPSVS---------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
              + +  +                        + L E  +    +    + G   H   
Sbjct: 137 VQPVFLRINPQLPAAQSSRLAMAGTATPFGIDEADLAEAVRRVDNASHLMLKGFHVHAMS 196

Query: 168 ENKSFLCFSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRL 218
              S      +L    + +  +        Q+   ++GGGI       + +  +  C+ L
Sbjct: 197 HQMSVERHEQLLDFYLQRWQEWKALARDPGQLTHFNVGGGIGVDYLNSQQFDGQRLCRYL 256

Query: 219 KEFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLY 275
           ++   +      L  EPG  I          VLD   +     +V               
Sbjct: 257 EKRLGEQHDAPILRFEPGRFISAYCGYYAIEVLDSKTSHGEHFLVCRGGTHQFRLPVAQS 316

Query: 276 QESATIYPNTGPYT-------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
            +   I+    P +         + G+ C   D+       K V IGD +       Y  
Sbjct: 317 HDHPVIHLPNAPQSTESSEQAYTIVGQLCTPKDVLSRRQPLKGVNIGDLLVLPLAGAYGY 376

Query: 329 NRKN-WFNGINMPTIAVKNVDGTIK 352
           N  +  F     P+         ++
Sbjct: 377 NISHADFLCHPRPSQHFVRNGERVR 401


>gi|260768554|ref|ZP_05877488.1| ornithine decarboxylase/arginine decarboxylase [Vibrio furnissii
           CIP 102972]
 gi|260616584|gb|EEX41769.1| ornithine decarboxylase/arginine decarboxylase [Vibrio furnissii
           CIP 102972]
 gi|315180265|gb|ADT87179.1| Diaminopimelate decarboxylase [Vibrio furnissii NCTC 11218]
          Length = 399

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 61/357 (17%), Positives = 106/357 (29%), Gaps = 17/357 (4%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  L+D   +               V L  ALK      +  TL Q       ++  EV 
Sbjct: 36  PLLLLDCDIVRQQYRALSAAL--PNVTLHFALKPLPHPVVVRTLLQEGASFDLATTGEVE 93

Query: 65  L-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           L   E    E   +    K              +F   +     K KA +   ++ +R++
Sbjct: 94  LVAQEGVPAERTIHTHPIKRDADIRDALAYGCNVFVVDNLNELAKFKAYRDEVELLVRLS 153

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE----NKSFLCFSAML 179
              S +   L+              +  +     + GL FH   +     K         
Sbjct: 154 FRNSEAFADLSKKFGCSPEQAVNIIEMAKEWNIRIKGLSFHVGSQTTNPQKYVEAIRTCK 213

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYSV--QIYLEPGE 235
             +E+     +  +  + +GGG       +  P+  FC  + E   +     Q+  EPG 
Sbjct: 214 GVMEEVVARGLPALSTLDIGGGFPVNYTKQVMPIDQFCLPINEALAELPETVQVIAEPGR 273

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGPYTA 290
            IV        +V+  +E    +          S    + D   Y    T+        +
Sbjct: 274 FIVAQCMMSVASVMGQAERDGQMWYYLDDGVYGSFSGLIFDDAQYPL-VTLKQEGERVPS 332

Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
           ++ G +C + D+  E      +  GD I    +  Y       FN        V N 
Sbjct: 333 VLAGPTCDSIDVIAEDILLPKLDNGDLIVGRMMGAYTSATATDFNFFKRAQTVVFNE 389


>gi|295668118|ref|XP_002794608.1| ornithine decarboxylase [Paracoccidioides brasiliensis Pb01]
 gi|226286024|gb|EEH41590.1| ornithine decarboxylase [Paracoccidioides brasiliensis Pb01]
          Length = 448

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 58/360 (16%), Positives = 105/360 (29%), Gaps = 32/360 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y+ D  ++               VK   A+KC     +   + Q  +G   +S  E+ 
Sbjct: 69  PFYVADLGQVYRQHIRWKKNLGR--VKPFYAVKCNPDPQILRLMVQLGNGFDCASKAEID 126

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
              +         Y    K        S          +    +K K      ++ LRI 
Sbjct: 127 YALDVGVDPSRIIYAQPCKTKSFLRYASQVGVKQMTFDNSDELYKIKEMCPDAELYLRIL 186

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S S   L+        +     +  +    NV G+ FH     +    F   +++  
Sbjct: 187 TDDSASLCRLSMKFGASLSVARSLLELAKELKLNVIGVSFHVGSGAEDPKSFVKAVEDSR 246

Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
             F         ++ + +GGG      +         L E+   + ++I  EPG   V +
Sbjct: 247 FVFDQAAEVGFDLKVLDVGGGFSEDTFERFASTLSDALDEYFPPH-IRIIAEPGRYYVAS 305

Query: 241 TTTLNTTVLD----------------------ISENIKNLVIVDSSVEAHVPDYLLYQES 278
             TL   V+                       I  N        + +  H          
Sbjct: 306 AFTLAVNVIARRDVSLEMSDSDSTAGATEAYMIYLNDGVYGNFSNIIFDHQHPVPQILTM 365

Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGI 337
            +      P    + G +C   D+  E       + +G+ + FE++  Y       FNG 
Sbjct: 366 ESRVC--APIEYSIWGPTCDGIDLICERIALPGALDVGNWLYFENMGAYTKCSATRFNGF 423


>gi|242808433|ref|XP_002485161.1| ornithine decarboxylase [Talaromyces stipitatus ATCC 10500]
 gi|218715786|gb|EED15208.1| ornithine decarboxylase [Talaromyces stipitatus ATCC 10500]
          Length = 475

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 58/384 (15%), Positives = 104/384 (27%), Gaps = 57/384 (14%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D  ++        +      VK   A+KC     +   + Q  +G   +S  E+ L
Sbjct: 78  FYVADMGEVYR--QHMRWKLNLGRVKPFYAVKCNPDPEVLRLMAQLGNGFDCASKTEIDL 135

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             +         Y    K                   +    +K K      ++ LRI  
Sbjct: 136 ALKTGIDPSRIIYAQPCKTRSYLRYARQKGVKQMTFDNADELYKIKNDFPDAELYLRILT 195

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S S   L+              D  +    NV G+ FH     +    F    ++   
Sbjct: 196 DDSTSLCRLSMKFGASLDTARPLLDLAKKLELNVVGVSFHVGSGAEDPGAFLKAAQDARW 255

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ---IYLEPGEAIV 238
            F        ++  + +GGG      D   + F   L +  +        I  EPG   V
Sbjct: 256 VFDQAAEVGYELHTLDVGGGF----CDETFEKFAAILSKAVDDLFPPNIRIIAEPGRYYV 311

Query: 239 TNTTTLNTTVLD-----------------------------ISENIKNLVIVDSSVEAHV 269
               TL   V+                              I ++   +  + +     +
Sbjct: 312 AAAFTLAANVIARRDVLDPQASSGSYMIYLNDGVYGNFSNIIFDHQHPVAQILTCANGSI 371

Query: 270 PD--------------YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPV-KI 314
           P                       +   +       + G +C   D+  +      +  +
Sbjct: 372 PPTPGLTASGSSTPGSATPCSADGSPCASPAGIEYSIWGPTCDGIDVISQRIVLPGLVDV 431

Query: 315 GDRISFEDVAGYNINRKNWFNGIN 338
           GD + FED+  Y       FNG  
Sbjct: 432 GDWLYFEDMGAYTRCSATRFNGFP 455


>gi|167383073|ref|XP_001736394.1| ornithine decarboxylase [Entamoeba dispar SAW760]
 gi|165901251|gb|EDR27353.1| ornithine decarboxylase, putative [Entamoeba dispar SAW760]
          Length = 413

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 58/352 (16%), Positives = 115/352 (32%), Gaps = 25/352 (7%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D +     ++          V+   A+KC     +   L     G   +SL E+  
Sbjct: 28  FWIFDTKGAEKAVERWKK--NMPTVRPCFAVKCNPEPHLVKLLGNLGCGFDCASLNEIKE 85

Query: 66  GHE-KFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
             +  F  E   Y+  +K      +A        I +++ ++ K    A ++   I +  
Sbjct: 86  VLDLGFSPEDITYSQTFKPYNQLIEASHLGIRHTIVDSIDEVQKIAKYAPEMGVMIRIM- 144

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC---ENKSFLCFSAML 179
               S             + +    K+ I+ +  N++G+ FH       ++ F       
Sbjct: 145 ENDTSAGHVFGEKFGLHDNEVEIVLKE-IKDKGLNLDGVHFHVGSDSHNSQIFTKALTKA 203

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ-RLKEFSEKYSVQIYLEPGEAIV 238
           +N+      F  +   I +GGG              +  +KE       +   EPG  + 
Sbjct: 204 RNVVTLAEQFGMKPYLIDIGGGFSQIAPFEEFATTIEKTIKELEFPEGTRFIAEPGRYLA 263

Query: 239 TNTTTLNTTV----LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN--------TG 286
           +N   L  ++    + I    K +               ++ E   I           T 
Sbjct: 264 SNVFHLVCSLHGKRVRIHNEKKQIEYTSGDGLHGSFGCCIWFEKQKICECVTQIINENTK 323

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIG-DRISFEDVAGYNINRKNWFNGI 337
            Y +++ G SC   D          ++ G D + F ++  Y I+    FNG 
Sbjct: 324 MYESIIYGPSCNGSDKVA-IQDLPEMEPGKDWLLFPNMGAYTISMATNFNGF 374


>gi|308503917|ref|XP_003114142.1| CRE-ODC-1 protein [Caenorhabditis remanei]
 gi|308261527|gb|EFP05480.1| CRE-ODC-1 protein [Caenorhabditis remanei]
          Length = 426

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 53/363 (14%), Positives = 110/363 (30%), Gaps = 30/363 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           + L+D  K++   +      +   ++   A+KC     +   L     G   +S  E+ +
Sbjct: 44  FMLVDLDKIIERFELWKR--ELPMIEPFYAVKCNTDLVLIRILASLGCGFDCASREEIDI 101

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   +   Y    K           D  +    +     K      + ++ LRI  
Sbjct: 102 VMGTGVSADRLIYANPCKTRSFITHAMERDVRMMTFDNSEELLKIARLHPNAEMILRIAV 161

Query: 125 SVSYSKFILADPNRPFSRL-GEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
           S   +   L         L G +       E  NV G+ FH          +   L++ +
Sbjct: 162 SDPTATCPLNLKFGADPVLAGPQLLKLASEEGVNVVGISFHVGSGCNDASAYRNALQHAK 221

Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI----YLEPGEA 236
                      +++ I +GGG    +   P +   + +++  +++  +       EPG  
Sbjct: 222 NLCEIGEGLGFKMDIIDMGGGFPGAEHHNPFEKIAETIRDALDEFFPETEKRLIAEPGRF 281

Query: 237 IVTNTTTLNTTVL------------------DISENIKNLVIVDSSVEAHVPD-YLLYQE 277
                 +L   ++                  D          V  S    + D       
Sbjct: 282 FAAGPFSLCANIIHATEVPATKITKDPKDCADHGYMYYINDGVYGSFNCIMFDHAHPVGA 341

Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                     Y + + G +C + D+  +      ++IG+ + + D+  Y +     FNG 
Sbjct: 342 PLFDVGRNEKYISTIWGPTCDSLDLVEDKKLMAKMEIGEWLYYPDMGAYTLAAGTTFNGF 401

Query: 338 NMP 340
             P
Sbjct: 402 AKP 404


>gi|260460667|ref|ZP_05808918.1| Orn/DAP/Arg decarboxylase 2 [Mesorhizobium opportunistum WSM2075]
 gi|259033772|gb|EEW35032.1| Orn/DAP/Arg decarboxylase 2 [Mesorhizobium opportunistum WSM2075]
          Length = 377

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 46/362 (12%), Positives = 106/362 (29%), Gaps = 34/362 (9%)

Query: 3   KT-PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            T P  ++D   + +N             ++  A+K   A  +   L        ++S+ 
Sbjct: 15  PTGPCLVVDLDVVRDNFRAFEKAL--PDSRIYYAVKANPAPEILRLLAAMGSSFDTASVA 72

Query: 62  EVMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           EV +        +  ++      +     A          + V ++ K    A       
Sbjct: 73  EVEMAMDAGAPADRISFGNTIKKERDIARAYQLGIRLFAVDCVEEVEKVARVAPGSRVFC 132

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFS 176
            +  +   +          +              ++   ++  G+ FH   +      + 
Sbjct: 133 RVLTDGEGAEW----PLSRKFGCVPAMAVDVLRHAKGLGLDAYGVSFHVGSQQTDLTAWD 188

Query: 177 AMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSV 227
             L++ +  F         ++ +++GGG                      L++       
Sbjct: 189 RALRDAKTVFATLAEEGIVLKMVNMGGGFPTRYLRDVPAAQAYGQAIFSALRKHFGNAIP 248

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESA 279
           +  +EPG  +V N   + + V+ IS+   N  +            +   + + + Y    
Sbjct: 249 ETIIEPGRGMVGNAGVIKSEVVLISKKADNDNVRWVFLDIGKFGGLAETMDEAIRYPIVT 308

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FN 335
                      ++ G +C + D+  E   +     + IGD +  E    Y        FN
Sbjct: 309 RHDGTETA-PCVLAGPTCDSADVMYEKTPYPLPLSLTIGDEVLIEGTGAYTTTYSAVAFN 367

Query: 336 GI 337
           G 
Sbjct: 368 GF 369


>gi|303321193|ref|XP_003070591.1| ornithine decarboxylase [Coccidioides posadasii C735 delta SOWgp]
 gi|240110287|gb|EER28446.1| ornithine decarboxylase [Coccidioides posadasii C735 delta SOWgp]
          Length = 445

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 52/359 (14%), Positives = 108/359 (30%), Gaps = 29/359 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y+ D  ++        +      VK   A+KC     +   +    +G   +S  E+ 
Sbjct: 69  PFYVADLGEVYR--QHIRWKMNLGRVKPFYAVKCNPDPQVLRLMAHLGNGFDCASKAEID 126

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                        Y    K        +          +    +K K      ++ LRI 
Sbjct: 127 YVLAAGVDPSRIIYAHPCKTKSYLRYAAQQGVKQMTFDNADELYKIKTMCPDAELFLRIL 186

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S S   L+        +     +  +    NV G+ FH     +    F   +++  
Sbjct: 187 TDDSASLCRLSMKFGASLTVTRSLLELAKDLGLNVVGVSFHVGSGAEDPTAFVKAVEDAR 246

Query: 184 KEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
             F         ++ + +GGG      +         L  +   + +++  EPG   V +
Sbjct: 247 FVFDQASDIGHDLKVLDVGGGFCDETFERFAAALSDALDTYFPPH-IRVIAEPGRYYVAS 305

Query: 241 TTTLNTTVLDIS--------------ENIKNLVIVDSSVEAHVPDYLLYQESA------- 279
             TL   V+                      ++ ++  V  +  + +   +         
Sbjct: 306 AFTLAANVIARRDVSPAASDSDSASGPAEMYMIYLNDGVYGNFSNIVFDHQHPVAQILTK 365

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGI 337
               +T P    + G +C   D+  +       + +G+ + FE++  Y       FNG 
Sbjct: 366 DDMASTHPVEYSIWGPTCDGIDVISKRVTLNGVLGVGNWLYFENMGAYTQCSATRFNGF 424


>gi|474034|emb|CAA47165.1| ornithine decarboxylase [Drosophila melanogaster]
          Length = 394

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 56/357 (15%), Positives = 104/357 (29%), Gaps = 23/357 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
             + D   +  N+     +     +K   A+KC     +   L Q   G   +S  EV L
Sbjct: 33  LNICDLSSVERNVRLWQKLLPR--IKPFYAVKCNDDPMVVRLLAQLGAGFDCASKNEVKL 90

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   +    +                   ++   +K      +  + +R   
Sbjct: 91  VLGFDVSPERIIFANPCRPVSHLEYAKEHQVSNGTVDNEFEVYKLHTHYPNSNLIVRFKS 150

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKI-ESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
               ++  L D     + +       + +S    V G  FH          +   +K  +
Sbjct: 151 EAKEAQCPLGDKFGCDADVDAAALMLLAKSLELKVTGTSFHVGSGCSELQAYDRAIKKAK 210

Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEKYSVQIYLEPGEAI 237
             F         ++++ +GGG   +D     K        ++       V I  EPG   
Sbjct: 211 NLFKFGALLGYDMDFLDIGGGFPGSDDVKFEKIAESVNTSVQRHFPDERVHIIAEPGRFF 270

Query: 238 VTNTTTLNTTVLDISE-----------NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286
           V    TL   +    E                  V  S    + D+ +      +     
Sbjct: 271 VAAACTLVCKIHAKREIRNEAGKLDTVMYYLNDGVYGSFNCILYDHQVVIAEHYLDNAES 330

Query: 287 PY--TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                +++ G SC A D   E      +  GD + F ++  Y +   + FNG  +P 
Sbjct: 331 LPHLKSLIWGPSCDALDKISEDLHLPNLNRGDLLGFRNMGAYTMPIASAFNGFEVPK 387


>gi|114331408|ref|YP_747630.1| Orn/DAP/Arg decarboxylase 2 [Nitrosomonas eutropha C91]
 gi|114308422|gb|ABI59665.1| Orn/DAP/Arg decarboxylase 2 [Nitrosomonas eutropha C91]
          Length = 411

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 48/374 (12%), Positives = 99/374 (26%), Gaps = 34/374 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+Y  D+Q +   + +         + L  A+K      +   L   +DG   +S+ E+
Sbjct: 38  TPFYAYDRQLISTRVQSLRQHLP-PDILLHYAMKANPMPAVVQHLAGLVDGIDVASVGEM 96

Query: 64  MLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            +        E  ++        E+   ++    I   +  +L      A +      + 
Sbjct: 97  KVALDAGVTPENISFAGPGKNRQELACAIAAGIIINMESEQELETIAQLADETGFHPKVA 156

Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174
           +  +     K           + G   +        I     +  GL   +  +N     
Sbjct: 157 VRVNPDFELKSSGMRMGGGSKQFGIDAERIPAVLQRIAQLKLDFEGLHIFSGSQNLRVEA 216

Query: 175 FSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY----- 225
                +       +        I  I++GGG                +    ++      
Sbjct: 217 IQEAHEKTLQLGLQLASTSPVPIRTINIGGGFGVPYFPGENPLDLSAVGTNLKQLLAEIP 276

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY--------- 272
               +++  +E G  IV         VL+   +   + ++ +    H             
Sbjct: 277 ASSPNIRFVVELGRYIVAEAGIYVCRVLEKKLSRGQVFLITNGGLHHHLAASGNFGQVIR 336

Query: 273 -LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                        +   TA V G  C   D+          + GD I       Y +   
Sbjct: 337 KNYPVAVGNKMYISETETASVVGPLCTPLDLLANQMELSKAEPGDLIVVFQSGAYGLTAS 396

Query: 332 -NWFNGINMPTIAV 344
              F     P   +
Sbjct: 397 PTSFLSHPAPLEIL 410


>gi|114778627|ref|ZP_01453443.1| probable diaminopimelate decarboxylase protein [Mariprofundus
           ferrooxydans PV-1]
 gi|114551092|gb|EAU53653.1| probable diaminopimelate decarboxylase protein [Mariprofundus
           ferrooxydans PV-1]
          Length = 386

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 56/378 (14%), Positives = 99/378 (26%), Gaps = 39/378 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVM 64
            Y+ D   +   +     I   AGV++  A+K            +    G   +SL E  
Sbjct: 10  CYVYDTTPMREKIAHLNQIMP-AGVEVFYAMKANPHPAFLQAAREAGAKGIEIASLGEAE 68

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                 F      Y    K  E           TI   ++++ ++ +    +L K   + 
Sbjct: 69  KAVTAGFPAGQLIYTGPGKSSEELRWGVAHGIRTIHIESLTEAHRLQAICTELGKNQDIL 128

Query: 122 INPSVSYSKFI-LADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCENKSFL 173
           +  +  +         +    + G             +  +     GL  +      +  
Sbjct: 129 LRINADFDIHEAQTTFSGGSKKFGIDEEKLADFLPQILALDHLRFRGLHVYAASGVLNVG 188

Query: 174 CFSAMLKNIEKEFG-----HFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK 224
                 + +          H  T  + I  GGG          D+  + +   L    E+
Sbjct: 189 DLLKNCELVFGMARNIEANHPGTCCDTIDFGGGFGVDYLEEGHDFDPQAYADGLAALIEQ 248

Query: 225 YSV---QIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESAT 280
           Y       +LE G  +  ++    T VLDI ++  K  VI    +        L      
Sbjct: 249 YGFGERTFFLELGRYLAADSGWFCTEVLDIKDSRGKKQVICAGGINHFRRPAALAINHPM 308

Query: 281 IYPNTGPYT------------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
                                    G  C   D          V +GD   F     Y +
Sbjct: 309 AIIPMHREKLFPAQEQVRDEAVYFGGPLCTGADKLANNVLMNAVDVGDIAVFGLAGAYGL 368

Query: 329 NRKN-WFNGINMPTIAVK 345
              N  F     P   + 
Sbjct: 369 TMSNLEFLSHERPQEIIL 386


>gi|223995827|ref|XP_002287587.1| ornithine decarboxylase [Thalassiosira pseudonana CCMP1335]
 gi|220976703|gb|EED95030.1| ornithine decarboxylase [Thalassiosira pseudonana CCMP1335]
          Length = 386

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 51/381 (13%), Positives = 112/381 (29%), Gaps = 52/381 (13%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y++D   +   L           V    A+KC     +  TL         +S  E+ +
Sbjct: 1   FYVVDLGIVGAQLARWRAAFPR--VVPYYAIKCNPDPVIVRTLASLGCNFDCASRGEIEI 58

Query: 66  GHE-------KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
             +               Y    K       AV      + F+ V+++ K    ++K+  
Sbjct: 59  VQQVSRGLPSGIPKPEIVYANPCKGRGHIIDAVCRGVRMMTFDNVAEVQKCAAVSRKIQL 118

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
            + + I         + +    P         +  +     V G+ FH     +    + 
Sbjct: 119 IMRI-ITDDSGSQCRLSSKFGAPKQHWPILLAEA-KKFGLEVVGVSFHVGSGCRDATRYE 176

Query: 177 A----MLKNIEKEFGHFITQIEWISLGGGIH-----FTDKDYPVKDFCQRLKEFSEKYSV 227
                  +  E     +   +  + +GGG         ++     +    +    ++   
Sbjct: 177 MALKDCKELFEVAKRDYGFDMNILDIGGGFPGETHNKGNQYMYFNEIAAAVAPMLDELFP 236

Query: 228 Q-----IYLEPGEAIVTNTTTLNTTVLDIS----------------------ENIKNLVI 260
                 +  EPG  +V  ++TL  +V+ +                               
Sbjct: 237 PSSGVKLIAEPGRYLVAASSTLVASVVSVREAAVSGIVRQAIADSVQPLQDDFAYYINDG 296

Query: 261 VDSSVEAHVPD---YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDR 317
           V  +    + D    +  +   T   +   Y + V G +C + D+         + +GD 
Sbjct: 297 VYGAFNNLLFDHATVVDEEADETSPQDETLYPSTVFGPTCDSMDVLSRGVLLPKMAVGDW 356

Query: 318 ISFEDVAGYNINRKNWFNGIN 338
           + F+++  Y     + FNG  
Sbjct: 357 MYFQNMGAYTSAAASTFNGFP 377


>gi|317155498|ref|XP_001825149.2| ornithine decarboxylase [Aspergillus oryzae RIB40]
          Length = 416

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 61/369 (16%), Positives = 119/369 (32%), Gaps = 31/369 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+ + D +++    +  L       +    A+KC +   +   L +   G   +S  E+ 
Sbjct: 30  PFLVADTRRIFQQHERWLQCL--PNIAPFYAVKCNSNIRLLRYLARLGVGFDCASWGEMK 87

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           L            +    K      +   S      F+ V +L K KD A   + ++ LR
Sbjct: 88  LVLNLGVDPSRIIFAHPCKAVSALQMASRSGVPRTTFDNVDELEKIKDNA--PNLRLLLR 145

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           I      +   L +         +    K +     V+G+ FH      +   F   ++N
Sbjct: 146 IFADDDTALVSLGNKFGAPLDTTKALLLKAKDLGLVVDGVSFHVGSGASNADTFVTAVQN 205

Query: 182 IEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
            +  F         +  + +GGG   ++ +       + +++     +  +  EPG    
Sbjct: 206 AKHVFQQGKQLGFDMHVLDVGGGFQDSNFEPMALSLQRAIEKEFPPSTQVM-AEPGRYYA 264

Query: 239 TNTTTLNTTV-----------------LDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
            +  T    V                 L +++ I    +   +        L  QE+ + 
Sbjct: 265 RSFYTAACKVVARRKQIGQDKLSQSDMLYLNDGIYGCFMNAVAENEIYRPILFKQETTSS 324

Query: 282 YPNT-GPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGIN- 338
                G +   V G +C   D   +       VK+GD + FE++  Y       FNG   
Sbjct: 325 TEREAGEHRYSVWGPTCDGLDCIAKEATMGCEVKVGDWVKFENMGAYTTATSTQFNGFPN 384

Query: 339 MPTIAVKNV 347
              I   + 
Sbjct: 385 RYDIIYVDD 393


>gi|153011560|ref|YP_001372774.1| Orn/DAP/Arg decarboxylase 2 [Ochrobactrum anthropi ATCC 49188]
 gi|151563448|gb|ABS16945.1| Orn/DAP/Arg decarboxylase 2 [Ochrobactrum anthropi ATCC 49188]
          Length = 377

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 51/355 (14%), Positives = 109/355 (30%), Gaps = 25/355 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   + +N  +       +  ++  A+K   A  +   L        ++S+ E+ 
Sbjct: 18  PCLVVDTDVVRDNYQSFEKALPYS--RIFYAVKANPAPEILRLLASLGSCFDTASVAEIE 75

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +  E        +Y    K     A        ++         K        ++  R+ 
Sbjct: 76  MALEAGATPTRISYGNTIKKERDIARAFELGIRLYAVDCVEEVEKVARAAPGSRVFCRVL 135

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
                +++ L+        +        +S   +  G+ FH   +      +   L +  
Sbjct: 136 TDGEGAEWPLSRKFGCVPAMAIDVLRHAKSLGLDSYGVSFHVGSQQTDLSAWDRALGDAA 195

Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPG 234
             F         +  +++GGG                      L +       +  +EPG
Sbjct: 196 SVFRTLADEGIVLRMVNMGGGFPTRYLKDVPTAQAYGMAIFDALSKHFGNRIPETIIEPG 255

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPNTG 286
             +V N   + T V+ +S    N  +    ++          + + + YQ   T +  + 
Sbjct: 256 RGMVGNAGVIKTEVVLVSRKADNDNVRWVYLDIGKFGGLAETMDEAIRYQ-IVTPHDGSE 314

Query: 287 PYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337
               ++ G +C + D+  E   +     + IGD I  E    Y        FNG 
Sbjct: 315 TEPCVLAGPTCDSADVLYEKTPYPLPVSLTIGDEILIEGTGAYTTTYSAVAFNGF 369


>gi|320035934|gb|EFW17874.1| ornithine decarboxylase [Coccidioides posadasii str. Silveira]
          Length = 447

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 52/359 (14%), Positives = 108/359 (30%), Gaps = 29/359 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y+ D  ++        +      VK   A+KC     +   +    +G   +S  E+ 
Sbjct: 71  PFYVADLGEVYR--QHIRWKMNLGRVKPFYAVKCNPDPQVLRLMAHLGNGFDCASKAEID 128

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                        Y    K        +          +    +K K      ++ LRI 
Sbjct: 129 YVLAAGVDPSRIIYAHPCKTKSYLRYAAQQGVKQMTFDNADELYKIKTMCPDAELFLRIL 188

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S S   L+        +     +  +    NV G+ FH     +    F   +++  
Sbjct: 189 TDDSASLCRLSMKFGASLTVTRSLLELAKDLGLNVVGVSFHVGSGAEDPTAFVKAVEDAR 248

Query: 184 KEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
             F         ++ + +GGG      +         L  +   + +++  EPG   V +
Sbjct: 249 FVFDQASDIGHDLKVLDVGGGFCDETFERFAAALSDALDTYFPPH-IRVIAEPGRYYVAS 307

Query: 241 TTTLNTTVLDIS--------------ENIKNLVIVDSSVEAHVPDYLLYQESA------- 279
             TL   V+                      ++ ++  V  +  + +   +         
Sbjct: 308 AFTLAANVIARRDVSPAASDSDSASGPAEMYMIYLNDGVYGNFSNIVFDHQHPVAQILTK 367

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGI 337
               +T P    + G +C   D+  +       + +G+ + FE++  Y       FNG 
Sbjct: 368 DDMASTHPVEYSIWGPTCDGIDVISKRVTLNGVLGVGNWLYFENMGAYTQCSATRFNGF 426


>gi|119180252|ref|XP_001241615.1| ornithine decarboxylase [Coccidioides immitis RS]
          Length = 447

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 52/359 (14%), Positives = 108/359 (30%), Gaps = 29/359 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y+ D  ++        +      VK   A+KC     +   +    +G   +S  E+ 
Sbjct: 71  PFYVADLGEVYR--QHIRWKMNLGRVKPFYAVKCNPDPQVLRLMAHLGNGFDCASKAEID 128

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                        Y    K        +          +    +K K      ++ LRI 
Sbjct: 129 YVLAAGVDPSRIIYAHPCKTKSYLRYAAQQGVKQMTFDNADELYKIKTMCPDAELFLRIL 188

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S S   L+        +     +  +    NV G+ FH     +    F   +++  
Sbjct: 189 TDDSASLCRLSMKFGASLTVTRSLLELAKDLGLNVVGVSFHVGSGAEDPTAFVKAVEDAR 248

Query: 184 KEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
             F         ++ + +GGG      +         L  +   + +++  EPG   V +
Sbjct: 249 FVFDQASDIGHDLKVLDVGGGFCDETFERFAAALSDALDTYFPPH-IRVIAEPGRYYVAS 307

Query: 241 TTTLNTTVLDIS--------------ENIKNLVIVDSSVEAHVPDYLLYQESA------- 279
             TL   V+                      ++ ++  V  +  + +   +         
Sbjct: 308 AFTLAANVIARRDVSPAASDSDSATGPAEMYMIYLNDGVYGNFSNIVFDHQHPVAQILTK 367

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGI 337
               +T P    + G +C   D+  +       + +G+ + FE++  Y       FNG 
Sbjct: 368 DDMASTHPVEYSIWGPTCDGIDVISKRVTLNGVLGVGNWLYFENMGAYTQCSATRFNGF 426


>gi|301166995|emb|CBW26574.1| putative diaminopimelate decarboxylase [Bacteriovorax marinus SJ]
          Length = 405

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 54/370 (14%), Positives = 112/370 (30%), Gaps = 23/370 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + + +Y  D   L ++L      R ++ +KL  A K      +         G   +S  
Sbjct: 22  LDSSFYFYDLDGLKDHLSYMRDTRDDS-IKLWYACKANPMSAILKIFRNLDFGLDVASQG 80

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKI 118
           E+          E        K  +    +   +   ++  +++Q     + A++L  + 
Sbjct: 81  ELEQVLSAGILPEDILSTGPSKSRKYLRSMIINEVNVVVLESLNQAYWLDEIARELGARP 140

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD---KIESEIKNVNGLMFHNNCE------N 169
            + +   + + +          +  G   K+     +S+ +N++   FH          +
Sbjct: 141 KVLLRVQLDWDEGKSVLGGDEITPFGLDEKEWLKLDKSKCQNLDFKGFHVFQWGNLLELS 200

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ-----RLKEFSEK 224
           +    +   + +++         +E I LGGG+             +      +K   E 
Sbjct: 201 RLERIWRGTIVSLQDLSKKMDIDMEVIDLGGGLGIPYAANETPLDFKDVNSLLVKLRDEY 260

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-PDYLLYQESATIYP 283
               I++E G           + V+D        ++V      H+    L  Q       
Sbjct: 261 KLQTIWMELGRYCTGPYGHYLSQVIDKKVVRGRDILVLDGGINHIARPALTDQAFPCEMF 320

Query: 284 NT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGINM 339
                      V G  C A D  G F   + +  GD + F     Y        F   N+
Sbjct: 321 RESDAKTKEFTVHGPLCTALDKLGTFQLPEDIDEGDWLVFSQAGAYGFTEAMPFFLCHNL 380

Query: 340 PTIAVKNVDG 349
           P   +     
Sbjct: 381 PAEVILYNGD 390


>gi|30249115|ref|NP_841185.1| Orn/DAP/Arg decarboxylase family protein [Nitrosomonas europaea
           ATCC 19718]
 gi|30138732|emb|CAD85037.1| Orn/DAP/Arg decarboxylases family 2 [Nitrosomonas europaea ATCC
           19718]
          Length = 409

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 45/375 (12%), Positives = 97/375 (25%), Gaps = 34/375 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+Y  D++ +   +         AG+ L  A+K      +   L   +DG   +S+ E+
Sbjct: 36  TPFYAYDRKLISARIQFLRQHLP-AGIHLHYAMKANPMPAVVQHLAGLVDGMDVASVGEM 94

Query: 64  MLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLR 121
            +        E  ++    K  +           I   +  +L      A++   +  + 
Sbjct: 95  KVALDAGITPENISFAGPGKSRQELICAIAAGIVINVESEYELETIAQLAEETGFQPKVA 154

Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCK------DKIESEIKNVNGLMFHNNCENKSFLC 174
           +  +     K           + G   +       +I     +  GL   +  +N     
Sbjct: 155 VRVNPDFELKSSGMKMGGGSKQFGIDAECVPAVLQRIAQLRFDFEGLHIFSGSQNLRVEA 214

Query: 175 FSAMLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY----- 225
                +       +        +  I++GGG                +    ++      
Sbjct: 215 LREAHEKTLQLGLQLASTSPVPVRAINIGGGFGVPYFPGESPLDLNAVGTNLQRLLAEIP 274

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY--------- 272
               +++  +E G  IV         VL+   +     +V +    H             
Sbjct: 275 SQFSAIRFVIELGRYIVAEAGIYVCRVLEKKISRGQTFLVTNGGLHHHLAASGNFGQVIR 334

Query: 273 -LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                               V G  C   D+  +       + GD +       Y +   
Sbjct: 335 KNYPVAIGNKMKIDETEIVSVVGPLCTPLDLLADRMELSRAEPGDLVVVFQSGAYGLTAS 394

Query: 332 NW-FNGINMPTIAVK 345
              F         + 
Sbjct: 395 PTAFLSHPASLEVLI 409


>gi|289627600|ref|ZP_06460554.1| hypothetical protein PsyrpaN_21127 [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289648756|ref|ZP_06480099.1| hypothetical protein Psyrpa2_13540 [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|330869725|gb|EGH04434.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. aesculi
           str. 0893_23]
          Length = 402

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 60/385 (15%), Positives = 121/385 (31%), Gaps = 35/385 (9%)

Query: 2   IKT-PY--YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
           ++T P   ++ D   L  ++   +     AGV+L  A+K  +   M +TL   + G   S
Sbjct: 18  LETDPLAAFVYDLDALQQHVTDVMAALP-AGVELYYAIKANSEALMLETLAPLVSGFEIS 76

Query: 59  SLYEVMLGHEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
           S  E+         + + ++     D ++ + L N    I   +++++ + +  A++  +
Sbjct: 77  SGGEIERVMACPTRKPYVFSGPGKLDSDLRSALLNKVEAIHLESLNEIARLQHLAEETGR 136

Query: 117 KIGLRINPSVS---------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
              + +  +                        + L E  +    +    + G   H   
Sbjct: 137 VQPVFLRINPQLPAAQSSKLAMAGTATPFGIDETDLAEAIRRVDSASHLTLKGFHVHAMS 196

Query: 168 ENKSFLCFSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRL 218
              S      +L    + +  +        Q+   ++GGGI       + +  +  C+ L
Sbjct: 197 HQMSVERHEQLLDFYLQRWQEWKALASYPEQLTHFNVGGGIGVDYLNSQQFDWQRLCRYL 256

Query: 219 KEFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLY 275
           ++   +      L  EPG  I          VLD   +     +V               
Sbjct: 257 EKRLGEQRDTPILRFEPGRFISAYCGYYAIEVLDSKTSHGEHFLVCRGGTHQFRLPVAQG 316

Query: 276 QESATIYPNTGPYT-------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
            +   I+    P T         V G+ C   D+       K V IGD +       Y  
Sbjct: 317 HDHPVIHVPCAPATGASEEQAYTVVGQLCTPKDVLSRQQPLKGVNIGDLLVLPLAGAYGY 376

Query: 329 NRKN-WFNGINMPTIAVKNVDGTIK 352
           N  +  F     P          ++
Sbjct: 377 NISHVDFLCHPRPVQHFVRNGERVR 401


>gi|242240545|ref|YP_002988726.1| Orn/DAP/Arg decarboxylase 2 [Dickeya dadantii Ech703]
 gi|242132602|gb|ACS86904.1| Orn/DAP/Arg decarboxylase 2 [Dickeya dadantii Ech703]
          Length = 392

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 55/374 (14%), Positives = 115/374 (30%), Gaps = 34/374 (9%)

Query: 5   PY--YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           P+  Y+ D   L  +           G +L  A K      +  TL   +DG  ++S  E
Sbjct: 19  PFCAYVYDLSALHAHASAMKAALP-PGCELFYAAKANPDAAILTTLADSVDGFEAASGGE 77

Query: 63  VMLGHEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           +    E+  G    +            AV    D +   ++++L + +  A++L   + +
Sbjct: 78  LSWLTEQVPGRRLIFGGPGKLPAELEQAVAQRIDALHVESLNELQRLEQCAERLATPVNI 137

Query: 121 RINPSV--SYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN-- 169
            +  ++                +  G    +   +  +        + G  FH       
Sbjct: 138 MLRMNIPLEGVTGTRLMMGGKPTPFGLDVAELPAAIARIKASRGLKLQGFHFHLMSHQLE 197

Query: 170 --KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSE 223
                      L  + +    F  Q+  +++GGGI        + +  +DFC++L +   
Sbjct: 198 VATHLSLMRRYLDTVHQWQRQFDIQVPVVNVGGGIGINYLDPQRHFDWQDFCRQLPQVIA 257

Query: 224 K---YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESA 279
           +   + +++  E G  +          VLD+ +N+     +      H            
Sbjct: 258 QTGSHGLRLRFECGRYVSAACGYYVMEVLDVKKNLGEWFAIAHGGTHHFRTPAAQGHNHP 317

Query: 280 -------TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                   + P        + G+ C   D+         +  GD + F     Y  N  +
Sbjct: 318 FSVLRREHLPPTVEQQPITLVGQLCTPKDVLARQQPVAALAPGDWLVFHLAGAYAWNISH 377

Query: 333 -WFNGINMPTIAVK 345
             F     P +   
Sbjct: 378 QNFLMHAPPEMIYL 391


>gi|320534481|ref|ZP_08034951.1| diaminopimelate decarboxylase [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|320133312|gb|EFW25790.1| diaminopimelate decarboxylase [Actinomyces sp. oral taxon 171 str.
           F0337]
          Length = 486

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 57/430 (13%), Positives = 121/430 (28%), Gaps = 68/430 (15%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMDG 54
            +P +++D+  L     +               AG +   A K F A  +   + +   G
Sbjct: 54  PSPVFVLDEADLRGRAASWSAAMAEEFWPNYGMAGGEAFYAGKAFLATKVAQWVLEEGMG 113

Query: 55  TTSSSLYEVMLGHEKFGG-----------ETHAYNVAYKDCE-IDAVLSNCDTIIFNTVS 102
             ++S  E+ +G                     +       E   AV      ++ ++  
Sbjct: 114 IDTASRVELAVGLAGLEKVDGYEATTRARRLGLHGNGKTPAEVTTAVRHRVGHLVIDSPE 173

Query: 103 QLNKFKDKAQKLHK----------KIGLRINPSVSYSKFILADPNRPFSRLGE------- 145
           +++       +L +          ++ +R+   +               + G        
Sbjct: 174 EVDYAVAAVHELRRSGDFGPAERARVMVRLTTGIHAGGHEYISTAHEDQKFGLSVSTGAA 233

Query: 146 --KCKDKIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLG 199
                  + +E   + GL  H   +      F      +L    +           I LG
Sbjct: 234 RRTIDAIMAAEELELAGLHSHIGSQILDLAGFREAVGVVLGLRHEIAVDTGHLCPEIDLG 293

Query: 200 GGIHFTDKDYPVKDF---------CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTT 247
           GG                       + ++E  E+       + +EPG A+   TT    T
Sbjct: 294 GGYGIAYTGADPVAPSPAQVARALAEAVRETCERLGDEVPTVSIEPGRAVAGPTTVTLYT 353

Query: 248 VLDISENI------KNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA------MVCGR 295
           V  +          +  V +D  +  ++   L       +  N  P          V G+
Sbjct: 354 VTGLKRVELGAGASRLYVSIDGGMSDNIRPALYEAAYTALVANRRPDPQAGLVRSRVVGK 413

Query: 296 SCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            C +GD+          + +GD ++      Y  +  + +N    P +       +   +
Sbjct: 414 HCESGDVVVRDVDLPTDLAVGDVLAVPATGAYGRSMASSYNLFTRPGVRWVLEGESGWVL 473

Query: 355 REFSYNDYYN 364
           R  +  D   
Sbjct: 474 RPETIEDLLR 483


>gi|304310859|ref|YP_003810457.1| Ornithine decarboxylase [gamma proteobacterium HdN1]
 gi|301796592|emb|CBL44804.1| Ornithine decarboxylase [gamma proteobacterium HdN1]
          Length = 387

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 53/371 (14%), Positives = 112/371 (30%), Gaps = 31/371 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TP++LID   +             A      A+K  ++  +   LNQ      ++S+Y
Sbjct: 21  LETPFFLIDLDLIEQQYRLLREALPFAAC--YFAMKSNSSTAVIQRLNQLGSRFEAASIY 78

Query: 62  EVMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+              +          ++A      +  F++  +L K    A   +   
Sbjct: 79  EIRRCLALGVPPRDIHFGNTIKKDSHILEAYRLGVHSYAFDSSQELEKIAQLAPGSNVSC 138

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
            L  +   +     L            +      S      G+ FH   + +S   +   
Sbjct: 139 RLATDGKGAVWG--LCRKFGRDPDDVVELMKYAHSLGLRAYGISFHTGSQQRSAGAWRRT 196

Query: 179 LKNIEKEFGHFITQ---IEWISLGGGIH-------FTDKDYPVKDFCQRLKEFSEKYSVQ 228
           ++           Q      I+LGGG                + ++ + +K   ++   Q
Sbjct: 197 IEICADIIQRLNQQQVYPRLINLGGGFPSYQYAGDEMQPQGDIFEYGKVIKTAVDELLPQ 256

Query: 229 ---IYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDSSVEAHVPDYLLYQESA 279
                +EPG  I      +  TV+ + +        + + +             +     
Sbjct: 257 GIDCVMEPGRFITAAAGLVKATVILVLDKATDGVPTRWVYLDAGRFNGLYESVDVEYPII 316

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEF---HFEKP-VKIGDRISFEDVAGYNIN-RKNWF 334
           T   +      ++ G +C + D+  +     F    +  GD + F +   Y+ +     F
Sbjct: 317 TNRTDGTAIRTVLAGPTCDSDDVMYDRDRAVFLPDTLTQGDSLIFTNAGAYSKSYMTVDF 376

Query: 335 NGINMPTIAVK 345
           NG       V 
Sbjct: 377 NGFPPMQEYVV 387


>gi|474030|emb|CAA47167.1| ornithine decarboxylase [Drosophila melanogaster]
          Length = 394

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 55/357 (15%), Positives = 103/357 (28%), Gaps = 23/357 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
             + D   +  N+     +     +K   A+KC     +   L Q   G   +S  EV L
Sbjct: 33  LNICDLSSVERNVRLWQKLLPR--IKPFYAVKCNDDPMVVRLLAQLGAGFDCASKNEVKL 90

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   +    +                   ++   +K      +  + +R   
Sbjct: 91  VLGFDVSPERIIFANPCRPVSHLEYAKEHQVSNGTVDNEFEVYKLHTHYPNSNLIVRFKS 150

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKI-ESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
               ++  L D     + +       + +S    V G  FH          +   +K  +
Sbjct: 151 EAKEAQCPLGDKFGCDADVDAAALMLLAKSLELKVTGTSFHVGSGCSELQAYDRAIKKAK 210

Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEKYSVQIYLEPGEAI 237
             F         ++++ +GGG   +D     +        ++       V I  EPG   
Sbjct: 211 NLFKFGALLGYDMDFLDIGGGFPGSDDVKFEQIAESVNTSVQRHFPDERVHIIAEPGRFF 270

Query: 238 VTNTTTLNTTVLDISE-----------NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286
           V    TL   +    E                  V  S    + D+ +            
Sbjct: 271 VAAACTLVCKIHAKREIRNEAGKLDTVMYYLNDGVYGSFNCILYDHQVVIAEHYQDNAES 330

Query: 287 PY--TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                +++ G SC A D   E      +  GD + F ++  Y +   + FNG  +P 
Sbjct: 331 LPHLKSLIWGPSCDALDQISEDLHLPNLNRGDLLGFRNMGAYTMPIASAFNGFEVPK 387


>gi|195474572|ref|XP_002089565.1| GE19168 [Drosophila yakuba]
 gi|194175666|gb|EDW89277.1| GE19168 [Drosophila yakuba]
          Length = 394

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 55/357 (15%), Positives = 102/357 (28%), Gaps = 23/357 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
             + D   +   L     +     +K   A+KC     +   L +   G   +S  EV L
Sbjct: 33  LNICDLSSVERKLRLWQRLLPR--IKPFYAVKCNDDPVVVRLLAELGAGFDCASKNEVKL 90

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   +    +                   ++   +K      +  + +R   
Sbjct: 91  VLGFGVQPERIIFANPCRPVSHLEYAKEHQVSNGTVDNEFEVYKLHTHYPNSNLIVRFKS 150

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKI-ESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
               ++  L D     + +       + +S    V G  FH          +   +K  +
Sbjct: 151 EAKEAQCPLGDKFGCDADVDAAALMLLAKSLDLKVTGTSFHVGSGCSELEAYDRAIKKAK 210

Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEKYSVQIYLEPGEAI 237
             F         ++ + +GGG   +D     K        ++       V I  EPG   
Sbjct: 211 NLFKFGALLGYDMDLLDIGGGFPGSDDGKFEKIAESVNTSVQRHFPNERVHIIAEPGRFF 270

Query: 238 VTNTTTLNTTVLDISE-----------NIKNLVIVDSSVEAHVPDYLLYQESATIYPNT- 285
           V    TL   +    E                  V  S    + D+ +      +     
Sbjct: 271 VAAACTLVCKIHAKREIRNEAGKLDTVMYYLNDGVYGSFNCILYDHQVVTAEHYLDNADS 330

Query: 286 -GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                +++ G SC A D   E      +  GD + F ++  Y +   + FNG  +P 
Sbjct: 331 LPQLKSLIWGPSCDALDKISEDLHLPNLNRGDLLGFRNMGAYTMPIASAFNGFEVPK 387


>gi|83951296|ref|ZP_00960028.1| decarboxylase, pyridoxal-dependent [Roseovarius nubinhibens ISM]
 gi|83836302|gb|EAP75599.1| decarboxylase, pyridoxal-dependent [Roseovarius nubinhibens ISM]
          Length = 392

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 53/364 (14%), Positives = 116/364 (31%), Gaps = 29/364 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D+ ++    D           ++  A+K   A  +   L Q      ++S  E+ 
Sbjct: 34  PTLVVDRGRIAQQYDALAEGLGE--ARIHYAVKANPAPEIIAMLVQRGARFDAASRGEIE 91

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           L   +   G   ++    K     A       +    ++ ++L K    A      + + 
Sbjct: 92  LCLSQGAKGSDISFGNTVKRPSDIAFAQSVGVELFSADSDAELEKIAQHAPGAKVYLRVI 151

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA---M 178
           +    +           P +    +  D       ++ GL FH   + K    +      
Sbjct: 152 VENENADWPLSRKFGCAPGAMA--ELMDYARGLDVDIVGLSFHVGSQTKEARHWLPVLDQ 209

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKYSVQIYL--EP 233
           +  +          +  ++LGGG           P     + ++    ++    Y+  EP
Sbjct: 210 VAELWHAARAAGHDMRVLNLGGGFPAHYDQSVQGPQAYAAEVMEAVRARFGQPEYVMAEP 269

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------DYLLYQESATIYPNT 285
           G  +V     +   V+ +S    + +     ++  +         + + Y +  T+    
Sbjct: 270 GRGLVAEAGHIAAEVMLVSRKSPDDLHRWVYLDIGMFSGLAECAGEAIRY-KIDTLRDGE 328

Query: 286 GPYTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPT 341
                ++ G SC + DI  E         ++ GDR+   +   Y  +  +  FNG   P 
Sbjct: 329 ETGPCVLAGPSCDSADILYEKRPIQLPLSLQSGDRVMIRNCGAYTSSYSSVGFNGFP-PL 387

Query: 342 IAVK 345
             V 
Sbjct: 388 EVVV 391


>gi|119468237|ref|ZP_01611363.1| diaminopimelate decarboxylase, PLP-binding protein [Alteromonadales
           bacterium TW-7]
 gi|119448230|gb|EAW29494.1| diaminopimelate decarboxylase, PLP-binding protein [Alteromonadales
           bacterium TW-7]
          Length = 401

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 52/378 (13%), Positives = 113/378 (29%), Gaps = 27/378 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+++ D  KL  +L   +       VKL  A+K      +  +L+        +S  
Sbjct: 19  LDTPFFVYDLDKLNAHLTRLV---AQTDVKLWYAVKANPLSKVIQSLDSAGFNFDVASKG 75

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+          +        K  +             +  +++Q+     +AQ  + ++
Sbjct: 76  ELEQVLAQGISSQRVLNTGPAKSPKQIKYFIERGVRIFVAESLNQVRWLNQQAQLQNTQL 135

Query: 119 GLRINPSVSYSKFILADPNRPF-SRLGEKCKDKI-----ESEIKNVNGLMFH----NNCE 168
            + +   + + +           +  G  C +       +    N +GL           
Sbjct: 136 QVLLRVQLRWPEGEKNPLGGDSLTPFGLGCDEWQALNTGDYPALNFDGLHIFQWGNMLST 195

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSE 223
            K    +S M+  +     +    ++ + LGGG+                     K   E
Sbjct: 196 QKLSELWSQMIAPLTTLANNLNINLKILDLGGGLGIPYTQNETILEWDGLIAALAKIKKE 255

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIY 282
               ++++E G   V         V++  +N     ++    +   +   +  Q+     
Sbjct: 256 ACVDELWMELGRYAVGECGHYANPVIECKQNYGQQQVILTGGINHLLRPAVTSQDFPAAL 315

Query: 283 PNTG---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338
                       + G  C A D  GE      +K  D + F     Y        F    
Sbjct: 316 LRESTAPEQAMSLYGPLCTALDCLGEHTLPSDLKEQDWLVFSQCGAYGFTESMPYFLCHE 375

Query: 339 MPTIAVKNVDGTIKAIRE 356
           +    V   +G +  +R+
Sbjct: 376 LAAEYVL-QNGELTCVRQ 392


>gi|1706323|sp|P50134|DCOR_DATST RecName: Full=Ornithine decarboxylase; Short=ODC
 gi|871008|emb|CAA61121.1| ornithine decarboxylase [Datura stramonium]
          Length = 431

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 47/362 (12%), Positives = 115/362 (31%), Gaps = 26/362 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y++D  ++++ +D   +      ++   A+KC         L+        +S  E+ 
Sbjct: 64  PFYVLDLGEVVSLMD--QWNAGLPNIRPFYAVKCNPEPSFLSMLSAMGSNFDCASRAEIE 121

Query: 65  LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                    +   +    K       A     +   F++  ++ K +    K    + ++
Sbjct: 122 YVLSLGISPDRIVFANPCKPESDIIFAAKVGVNLTTFDSEDEVYKIRKHHPKCELLLRIK 181

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
                +    +          +    +   ++    V+G+ FH    +     +   +  
Sbjct: 182 PMDDGNARCPMGPKYGALPEEVEPLLRTA-QAARLTVSGVSFHIGSGDADSKAYLGAIAA 240

Query: 182 IEKEF----GHFITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
            +  F       ++++  + +GGG                   + F ++  + I  EPG 
Sbjct: 241 AKGVFETAARFGMSKMTVLDIGGGFTSGHQFTTASAAVRSALEQHFHDEQELTIIAEPGR 300

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPN------ 284
                  TL TT++      +            S+   + D+     +     +      
Sbjct: 301 FFAETAFTLATTIIGKRVRGELREYWINDGLYGSMNCVLYDHATVNATPLACMSNRSNLN 360

Query: 285 ---TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
              +  + + V G +C A D     +    +++ D + F ++  Y     + FNG N   
Sbjct: 361 CGGSKTFPSTVFGPTCDALDTVLRDYQLPELQVNDWLIFPNMGAYTKAAGSNFNGFNTSA 420

Query: 342 IA 343
           I 
Sbjct: 421 IV 422


>gi|163736245|ref|ZP_02143664.1| Orn/DAP/Arg decarboxylase 2 [Phaeobacter gallaeciensis BS107]
 gi|161390115|gb|EDQ14465.1| Orn/DAP/Arg decarboxylase 2 [Phaeobacter gallaeciensis BS107]
          Length = 828

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 60/395 (15%), Positives = 107/395 (27%), Gaps = 39/395 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP+YL D   L   LD               +LK      +   L+ +  G   SSL E
Sbjct: 21  GTPFYLYDASVLRRRLDALRAALPQVDF--FYSLKSNPNLSVTRVLHGHGAGCEVSSLLE 78

Query: 63  VMLGH-EKFGGETHAY-NVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +          E          + E   A+      I+  +  +L +    A++    + 
Sbjct: 79  LETSLQAGATPERILMVGPGKSETELTRAIELGIKAIVVESAYELTQIDALARQQGRVQN 138

Query: 118 IGLRINPSVSYSKFILADPNRPFS------RLGEKCKDKIESEIKNVNGLMFHNNCENKS 171
           I LR+NP        L    RP         L +  K         + GL  +      +
Sbjct: 139 IALRVNPDFHAGGAKLNMSGRPTQFGIDQSELPDVLKQAEGCAQLRLCGLHAYMGTRILT 198

Query: 172 FLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
                     +L    +        ++++ +GGG      D   +     L +       
Sbjct: 199 HETVVANVGNILNLATEVVSSLKVPLDFVDVGGGFGIPYYDGETELDLDALGQAVTPLVQ 258

Query: 228 QI---------YLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHV-------- 269
                       +E G  +   +    T V     +  ++  + D     HV        
Sbjct: 259 SFGTTHPKTRVVIELGRYLSGPSGQFVTRVQQTKSSKGEHFAVCDGGSNVHVAAAGQGFL 318

Query: 270 ---PDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
                  L ++      +       + G  C   D+ G+       ++GD IS      Y
Sbjct: 319 RKNFPIRLLRDGKAEIDDEAAQPWTLTGPLCTPQDVIGKSVLMATPQVGDLISIGQSGAY 378

Query: 327 NINRKN-WFNGINMPTIAVKNVDGTIKAIREFSYN 360
                   F G   P   + +           +  
Sbjct: 379 GPTASPVNFLGFGAPAEVMIDGTELRLVRSRDTVE 413


>gi|307201784|gb|EFN81457.1| Ornithine decarboxylase [Harpegnathos saltator]
          Length = 427

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 53/369 (14%), Positives = 117/369 (31%), Gaps = 24/369 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y++D   ++      +   K   V    A+KC     +   L     G   +S  E+ 
Sbjct: 34  PFYIVDIGDIIRKHHEWIT--KMPKVIPHYAVKCNPDPTVIKVLAALNAGFDCASQQEIR 91

Query: 65  LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
              +     +   +            A   N   +  +   +L K K+   +    I +R
Sbjct: 92  QVMQYGVQSDRIIFANPTKCPSHIKFAKKKNVSRMTVDGELELLKIKELYPEAEIVIRIR 151

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS----A 177
            +   S           P      +     +     ++G  FH          FS     
Sbjct: 152 CDSKNSLVPLGSKFGCEPDEE-AVRLIQLTKDLGLTLHGFSFHVGSPCGEMSAFSKGIGI 210

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV--QIYLEPGE 235
             + I          ++ I +GGG         +      + +  +      ++  EPG+
Sbjct: 211 CKQLIAIARAIGCENVQMIDIGGGFPGASDT-DIDKLANIVNDAIQDLDPSIRVISEPGQ 269

Query: 236 AIVTNTTTLNTT------VLDISENIKNLVIVDSSVEAHVPDY----LLYQESATIYPNT 285
             VT+  TL +       V    + ++   +      + + +       Y +      + 
Sbjct: 270 YYVTSAFTLASYLHSKKLVRRSGKLMRMYYVNCGVYNSFIEEMLGLKARYPQFLFEPDSH 329

Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA-V 344
             + + + G +C + D+  +      ++IGD + ++D+  Y ++  + FNG   P +  +
Sbjct: 330 EKFISSLWGPTCDSYDVILKDVLMPELRIGDWLVWKDMGAYTLSISSTFNGFPSPMVVPI 389

Query: 345 KNVDGTIKA 353
                  K 
Sbjct: 390 IRKSQWEKL 398


>gi|212537713|ref|XP_002149012.1| ornithine decarboxylase [Penicillium marneffei ATCC 18224]
 gi|210068754|gb|EEA22845.1| ornithine decarboxylase [Penicillium marneffei ATCC 18224]
          Length = 472

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 53/376 (14%), Positives = 102/376 (27%), Gaps = 46/376 (12%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D  ++        +      +K   A+KC     +   + +   G   +S  E+ L
Sbjct: 80  FYVADMGEVYR--QHMRWKMNLGRIKPFYAVKCNPDPEVLRLMAKLGLGFDCASKTEIDL 137

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             +         Y    K                   +    +K K      ++ LRI  
Sbjct: 138 ALKTGIDSSRIIYAQPCKTRSYLRYARQKGVKQMTFDNTDELYKIKNDFPDAELYLRILT 197

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S S   L+              D  +    NV G+ FH     +    F    ++   
Sbjct: 198 DDSTSLCRLSMKFGASLDTARPLLDLAKKLELNVVGVSFHVGSGAEDPGAFLKAAQDARW 257

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            F        ++  + +GGG      +       + + +    +  +I  EPG   V   
Sbjct: 258 VFDQAAEVGYELHTLDVGGGFCDNTFEKFAAILSKAVDDLFPAHV-RIIAEPGRYYVAAA 316

Query: 242 TTLNTTVLD-----------------------------ISENIKNLVIVDSSVEAHVPDY 272
            TL   V+                              I ++   +  + +     +P  
Sbjct: 317 FTLAANVIARRDVFDPQNSSGSYMIYLNDGVYGNFSNIIFDHQHPVAQILTCANGSIPPT 376

Query: 273 L---------LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPV-KIGDRISFED 322
                         +             + G +C   D+  +      +  +GD + FED
Sbjct: 377 PGLTASGSSTPDPSAGDSPCAPAGVEYSIWGPTCDGIDVISQQIVLPGLVDVGDWLYFED 436

Query: 323 VAGYNINRKNWFNGIN 338
           +  Y       FNG  
Sbjct: 437 MGAYTRCSATRFNGFP 452


>gi|257484348|ref|ZP_05638389.1| hypothetical protein PsyrptA_13912 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|331008402|gb|EGH88458.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 402

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 60/385 (15%), Positives = 121/385 (31%), Gaps = 35/385 (9%)

Query: 2   IKT-PY--YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
           ++T P   ++ D   L  ++   +     AGV+L  A+K  +   M +TL   + G   S
Sbjct: 18  LETDPLAAFVYDLDALQQHVTDVMAALP-AGVELYYAIKANSEALMLETLAPLVSGFEIS 76

Query: 59  SLYEVMLGHEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
           S  E+         + + ++     D ++ + L N    I   +++++ + +  A++  +
Sbjct: 77  SGGEIERVMACPTRKPYVFSGPGKLDSDLRSALLNKVEAIHLESLNEIARLQHLAEETGR 136

Query: 117 KIGLRINPSVS---------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
              + +  +                        + L E  +    +    + G   H   
Sbjct: 137 MQPVFLRINPQLPAAQSSKLAMAGTATPFGIDETDLAEAIRRVDSASHLTLKGFHVHAMS 196

Query: 168 ENKSFLCFSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRL 218
              S      +L    + +  +        Q+   ++GGGI       + +  +  C+ L
Sbjct: 197 HQMSVERHEQLLDFYLQRWQEWKALASYPEQLTHFNVGGGIGVDYLNSQQFDWQRLCRYL 256

Query: 219 KEFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLY 275
           ++   +      L  EPG  I          VLD   +     +V               
Sbjct: 257 EKRLGEQRDAPILRFEPGRFISAYCGYYAIEVLDSKTSHGEHFLVCRGGTHQFRLPVAQG 316

Query: 276 QESATIYPNTGPYT-------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
            +   I+    P T         V G+ C   D+       K V IGD +       Y  
Sbjct: 317 HDHPVIHVPCAPATGASEEQAYTVVGQLCTPKDVLSRRQPLKGVNIGDLLVLPLAGAYGY 376

Query: 329 NRKN-WFNGINMPTIAVKNVDGTIK 352
           N  +  F     P          ++
Sbjct: 377 NISHVDFLCHPRPVQHFVRNGERVR 401


>gi|126740499|ref|ZP_01756186.1| decarboxylase, pyridoxal-dependent [Roseobacter sp. SK209-2-6]
 gi|126718300|gb|EBA15015.1| decarboxylase, pyridoxal-dependent [Roseobacter sp. SK209-2-6]
          Length = 404

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 53/362 (14%), Positives = 108/362 (29%), Gaps = 24/362 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   +                ++  A+K      +   L        ++   E+ 
Sbjct: 46  PTLVVDLDAVAAQYRALEAGLGR--ARIHYAVKANPEAAILKRLVALGAHFDAAGRAEID 103

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +           ++    K     A    C    F   +     K        ++ LRI 
Sbjct: 104 MCLAAGATAAQISFGNTIKRPADIAYAHACGITHFAFDASEELEKIATHAPGAEVCLRII 163

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA---MLK 180
                + + L+           +  D+       VNGL FH   + +    +        
Sbjct: 164 VENCEADWPLSRKFGCAPEDALRLMDQARGLGLVVNGLSFHVGSQTREPDMWVPVLDQAA 223

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-----KYSVQIYLEPGE 235
            I ++       +  +++GGG   +             +   +       + +I  EPG 
Sbjct: 224 AIWRQAREAGHALRLVNIGGGFPASYDQQMQGAEAYAREVMKQVEARFGEAAEIMAEPGR 283

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPNTGP 287
            +V     +   VL +S+  +N +           S +   + + + Y+   T   +   
Sbjct: 284 GLVAEAGAIAAEVLLVSKKHENDLHRWVYLDVGKFSGLAETMDEAIRYR-ITTDRDHEAK 342

Query: 288 YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIA 343
              +V G SC + D+  E   +     +K GDR+       Y     +  FNG     + 
Sbjct: 343 GPCVVAGPSCDSVDVLYEKQPYQLPTGLKAGDRVVIHSCGAYTSTYASIGFNGFPPLDVI 402

Query: 344 VK 345
           V 
Sbjct: 403 VI 404


>gi|77457028|ref|YP_346533.1| ornithine decarboxylase [Pseudomonas fluorescens Pf0-1]
 gi|77381031|gb|ABA72544.1| putative ornithine decarboxylase [Pseudomonas fluorescens Pf0-1]
          Length = 387

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 53/361 (14%), Positives = 113/361 (31%), Gaps = 30/361 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+ +ID   +    D      +    K+  A+K   A  + D L +       +S+YE
Sbjct: 25  ETPFVVIDTAMIAQAYDDLRAGFEF--AKVYYAVKANPAVEIIDLLKEKGSSFDIASIYE 82

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +          +  +Y    K  +               ++ + L      A      + 
Sbjct: 83  LDKVLSRGVSADQISYGNTIKKSKDIRYFYEKGVRLFATDSEADLRNIAKAAPGAKVYVR 142

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177
           +        +        +   +        I +    +   G+ FH   + +    + A
Sbjct: 143 ILTE---GSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDA 199

Query: 178 MLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSV 227
            +  ++  F          ++ I++GGG                ++  + LKE       
Sbjct: 200 AIAKVKVIFERLKEEDGIHLKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDDLP 259

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIY 282
           +I LEPG +++ N   L + V+ ++        + +          +       +     
Sbjct: 260 EIILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIETMDEAIKFPIWT 319

Query: 283 PNTGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337
              G     ++ G +C + DI  E +       + IGDR+ +     Y  +     FNG 
Sbjct: 320 EKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLYWLSTGAYTTSYSAVEFNGF 379

Query: 338 N 338
            
Sbjct: 380 P 380


>gi|225850437|ref|YP_002730671.1| diaminopimelate decarboxylase [Persephonella marina EX-H1]
 gi|225646093|gb|ACO04279.1| diaminopimelate decarboxylase [Persephonella marina EX-H1]
          Length = 451

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 63/394 (15%), Positives = 127/394 (32%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P ++I ++KL             +   V+   + K      +   L+Q        S 
Sbjct: 48  GSPLFVISERKLRERYRKIYNAFSSRYPNVQFGWSYKTNYLKAVCSVLHQEGAIAEVVSA 107

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKI 118
           +E          G+   +N  +K  +I    ++    I  +   ++   +  A +L KKI
Sbjct: 108 FEYEKARNLGIDGKNIIFNGPHKTLDILEKAASEGAMIHIDHFDEIIDLEKIADRLGKKI 167

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN---VNGLMFHNNCENKSFLCF 175
            + I  ++        D        G+               +NGL  H          +
Sbjct: 168 KVAIRVNMDTGIHPQWDRFGFNLETGQALDAVKRIATGGKLVLNGLHSHIGTFILEPEAY 227

Query: 176 ----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY------ 225
                 ++K   +   +F  +IE++ +GGG    +K          L    E+Y      
Sbjct: 228 GKEVEKLVKLAYEIEDNFGFKIEYLDIGGGFPSKNKLKGTYLPPDVLVPSVEEYAEKITE 287

Query: 226 ----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLL 274
                       ++ LE G AI+     L TT+              +    ++      
Sbjct: 288 ALYSNLRPGDFPKLILETGRAIIDEAEYLITTIFASKRLPDGRKAYIADAGVNILFTAFW 347

Query: 275 YQESATI--YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
           Y+ +  I          +++ G  C+  D+  +     P++ G R+    V  YN  +  
Sbjct: 348 YKFNIEIDREVQGTNEPSVIYGPLCMNIDVIDDGTMLPPLERGTRLIISPVGAYNNTQWM 407

Query: 333 WFNGINMPTIAVKNVDGTIKAIR-EFSYNDYYNN 365
            F     P + +   DG+++ +R     +D    
Sbjct: 408 QFIEY-RPNVVMIMEDGSVEIVREREDISDIERR 440


>gi|71734209|ref|YP_274941.1| hypothetical protein PSPPH_2752 [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71554762|gb|AAZ33973.1| LysA [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|320324164|gb|EFW80244.1| hypothetical protein PsgB076_13342 [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320328441|gb|EFW84443.1| hypothetical protein PsgRace4_18243 [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330885703|gb|EGH19852.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 402

 Score =  154 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 60/385 (15%), Positives = 121/385 (31%), Gaps = 35/385 (9%)

Query: 2   IKT-PY--YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
           ++T P   ++ D   L  ++   +     AGV+L  A+K  +   M +TL   + G   S
Sbjct: 18  LETDPLAAFVYDLDALQQHVTDVMAALP-AGVELYYAIKANSEALMLETLAPLVSGFEIS 76

Query: 59  SLYEVMLGHEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
           S  E+         + + ++     D ++ + L N    I   +++++ + +  A++  +
Sbjct: 77  SGGEIERVMACPTRKPYVFSGPGKLDSDLRSALLNKVEAIHLESLNEIARLQHLAEETGR 136

Query: 117 KIGLRINPSVS---------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
              + +  +                        + L E  +    +    + G   H   
Sbjct: 137 VQPVFLRINPQLPAAQSSKLAMAGTATPFGIDETDLAEAIRRVDSASHLTLKGFHVHAMS 196

Query: 168 ENKSFLCFSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRL 218
              S      +L    + +  +        Q+   ++GGGI       + +  +  C+ L
Sbjct: 197 HQMSVERHEQLLDFYLQRWQEWKALASYPEQLTHFNVGGGIGVDYLNSQQFDWQRLCRYL 256

Query: 219 KEFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLY 275
           ++   +      L  EPG  I          VLD   +     +V               
Sbjct: 257 EKRLGEQRDAPILRFEPGRFISAYCGYYAIEVLDSKTSHGEHFLVCRGGTHQFRLPVAQG 316

Query: 276 QESATIYPNTGPYT-------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
            +   I+    P T         V G+ C   D+       K V IGD +       Y  
Sbjct: 317 HDHPVIHVPCAPATGASEEQAYTVVGQLCTPKDVLSRRQPLKGVNIGDLLVLPLAGAYGY 376

Query: 329 NRKN-WFNGINMPTIAVKNVDGTIK 352
           N  +  F     P          ++
Sbjct: 377 NISHVDFLCHPRPVQHFVRNGERVR 401


>gi|163741227|ref|ZP_02148619.1| hypothetical protein RG210_17245 [Phaeobacter gallaeciensis 2.10]
 gi|161385580|gb|EDQ09957.1| hypothetical protein RG210_17245 [Phaeobacter gallaeciensis 2.10]
          Length = 828

 Score =  154 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 60/395 (15%), Positives = 105/395 (26%), Gaps = 39/395 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP+YL D   L   LD               +LK      +   L+ +  G   SSL E
Sbjct: 21  GTPFYLYDASVLRGRLDALRAALPQVDF--FYSLKSNPNLSVTRVLHGHGAGCEVSSLLE 78

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKL--HKK 117
           +          E        K     A         I+  +  +L +    A++    + 
Sbjct: 79  LETSLQAGATPERILMVGPGKSETELARAIELGIKAIVVESAHELTQIDALARQQGRVQN 138

Query: 118 IGLRINPSVSYSKFILADPNRPFS------RLGEKCKDKIESEIKNVNGLMFHNNCENKS 171
           I LR+NP        L    RP         L +  K         + GL  +      +
Sbjct: 139 IALRVNPDFHAGGAKLNMSGRPTQFGIDQSELPDVLKQAESCAHLRLCGLHAYMGTRILT 198

Query: 172 FLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
                     +L    +        ++++ +GGG      D   +     L +       
Sbjct: 199 HETVVANVGNILNLATEVISTLKAPLDFVDVGGGFGIPYYDGETELDLDALGQAVTPLVQ 258

Query: 228 QI---------YLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHV-------- 269
                       +E G  +   +    T V     +  ++  + D     HV        
Sbjct: 259 SFGATHPKTRVVIELGRYLSGPSGQFVTRVQQTKSSKGEHFAVCDGGSNVHVAAAGQGFL 318

Query: 270 ---PDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
                  L ++      +       + G  C   D+ G+       ++GD IS      Y
Sbjct: 319 RKNFPIRLLRDGKAEIDDEAAQPWTLTGPLCTPQDVIGKSVLMATPQVGDLISIGQSGAY 378

Query: 327 NINRKN-WFNGINMPTIAVKNVDGTIKAIREFSYN 360
                   F G   P   + +           +  
Sbjct: 379 GPTASPVNFLGFGAPAEVMIDGTELRLVRSRDTVE 413


>gi|237797381|ref|ZP_04585842.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331020231|gb|EGI00288.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 402

 Score =  154 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 62/376 (16%), Positives = 123/376 (32%), Gaps = 32/376 (8%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66
           ++ D   L  ++   +     AGV+L  A+K  +   M +TL   + G   SS  E+   
Sbjct: 26  FIYDLDALQQHVREVMAALP-AGVELYYAIKANSEALMLETLAPLVSGFEISSGGEIERV 84

Query: 67  HEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQK--LHKKIGLRI 122
                 + + ++     D ++ + L N    +   +++++ + +  A++    + + +RI
Sbjct: 85  MACPTRKPYVFSGPGKLDSDLRSALLNKVEAVHLESLNEIQRLQHLAEETGRVQPVFIRI 144

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCENKSFLCF 175
           NP +   +          +  G    D          +    + G   H      S    
Sbjct: 145 NPHLPAEQSSKLAMAGTATPFGIDEADLTQAVSLVDSASHLTLKGFHVHAMSHQMSVERH 204

Query: 176 SAMLKNIEKEFGHFI------TQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKYS 226
             +L    + +  +        Q+   ++GGGI       + +  +  C+ L++   ++S
Sbjct: 205 EQLLDFYLQRWQAWKALARYPDQLTHFNVGGGIGVDYLNSQQFDWQRLCRYLEKRLAEHS 264

Query: 227 VQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYP 283
               L  EPG  I          VLD   +     +V                +   I+ 
Sbjct: 265 DAPILRFEPGRFISAYCGYYVIEVLDSKTSHGEHFLVCRGGTHQFRLPVAQGHDHPVIHL 324

Query: 284 NTGPYT-------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFN 335
            + P T         V G+ C   D+       K V IGD +       Y  N  +  F 
Sbjct: 325 PSVPPTAAPSEQAYTVVGQLCTPKDVLSRRQPLKNVNIGDLLVLPMAGAYGYNISHADFL 384

Query: 336 GINMPTIAVKNVDGTI 351
               P          +
Sbjct: 385 CHPRPLQHFVRNGQRV 400


>gi|119899537|ref|YP_934750.1| diaminopimelate decarboxylase [Azoarcus sp. BH72]
 gi|119671950|emb|CAL95864.1| probable diaminopimelate decarboxylase [Azoarcus sp. BH72]
          Length = 427

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 45/376 (11%), Positives = 97/376 (25%), Gaps = 34/376 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+Y  D+  L   +         + +KL  A+K      +   + + +DG   +S  E
Sbjct: 53  QTPFYAYDRSLLDARVAQLRAALP-SEIKLHYAMKANPMPALVGHMVRLVDGIDVASAGE 111

Query: 63  VMLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           + +        +  ++     ++ E+   ++    I   +  +L         L     +
Sbjct: 112 LQVALDAGADPKEISFAGPGKREQELLQAVAAGILINVESFRELPILAAAQDALGLPARV 171

Query: 121 RINPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173
            +  +     K           + G   +D       I +      G       +N    
Sbjct: 172 AVRVNPDFELKSSGMKMGGGPKQFGVDAEDVPRLLAEIGNAGLAFEGFHLFAGSQNLRPE 231

Query: 174 ---CFSAMLKNIEKEFGHFITQ-IEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY---- 225
                      +           + +++LGGG                + +         
Sbjct: 232 AIVEAQQKSYALAVRLAEHAPTAVRFLNLGGGFGIPYFPGETPLDLAPIGDNLGAIVAAA 291

Query: 226 -----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-------- 272
                  +I +E G  +V         V+D   +   + +V      H            
Sbjct: 292 RQQLPEAEIVIELGRYLVGEAGIYVARVVDKKVSRGQIYLVTDGGLHHHLSASGNFGQVI 351

Query: 273 --LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                         +   T  V G  C   D+  +       + GD +       Y  + 
Sbjct: 352 RKNYPAAIGNRIEGSMRETVSVVGPLCTPLDLLADKMSLPAAEPGDLVVVYQSGAYGASA 411

Query: 331 KNW-FNGINMPTIAVK 345
               F G       + 
Sbjct: 412 SPQRFLGHPAVAEVLV 427


>gi|50085824|ref|YP_047334.1| putative ornithine decarboxylase [Acinetobacter sp. ADP1]
 gi|49531800|emb|CAG69512.1| putative ornithine decarboxylase [Acinetobacter sp. ADP1]
          Length = 386

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 55/361 (15%), Positives = 112/361 (31%), Gaps = 30/361 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP+ ++D   +  +              +  ALK   A  + D LN        +S+ E
Sbjct: 23  DTPFLVLDLSVIEKHYLELKQGF--PNTDIYYALKANPANEVIDRLNSLGSNFDLASVNE 80

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +             A+    K                + ++   LN     A        
Sbjct: 81  LKKVQAFGVDASRLAFGNTIKKRIDIQYFYDQGVRLYVTDSDIDLNNIAHYAPGSKVFFR 140

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177
           L I+              +         +  I+++   +   G+ FH   + +    + +
Sbjct: 141 LSID---GSETADWPLSGKFGCNAECVIRLAIKAKELGLIPYGISFHVGSQQRKIDLWDS 197

Query: 178 MLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSV 227
            L+  +  F         +++ ++LGGG+               K     L+ F   +  
Sbjct: 198 ALQETKAIFDVLATEHNIRLKMLNLGGGLPAQYVQETEAFDNYSKQINAALEIFKSYHLE 257

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLL-YQESATI 281
           QI LEPG ++V N   L + ++ IS+  +      +          +       Q     
Sbjct: 258 QIILEPGRSLVGNAGILVSEIVLISQRPQSGTKRWVYTDVGVFNGLIETLGESIQYPIMC 317

Query: 282 YPNTGPYTAMVCGRSCLAGDIFG---EFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337
                    ++ G +C + DI     ++     ++IGD + +     Y  +  +  FNG 
Sbjct: 318 KKTGNSDDIILAGPTCDSMDIMYQNKKYELPLSLEIGDHLYWLSTGAYTTSYSSIEFNGF 377

Query: 338 N 338
            
Sbjct: 378 P 378


>gi|294011486|ref|YP_003544946.1| diaminopimelate decarboxylase [Sphingobium japonicum UT26S]
 gi|292674816|dbj|BAI96334.1| diaminopimelate decarboxylase [Sphingobium japonicum UT26S]
          Length = 410

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 47/377 (12%), Positives = 104/377 (27%), Gaps = 35/377 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   +             A + L  A+K      + + + + +DG   +S  E
Sbjct: 34  DTPLFVYDMGIVEGQARAFRDAMPAA-LSLHYAVKANPHALLLERMAKLVDGFDVASGGE 92

Query: 63  VMLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           +    E        ++     +D E+   + +  TI   +  +  +    A++  +   L
Sbjct: 93  LARALEAGMDAAHISFAGPGKRDDELIVAIDSGATINLESEGEARRAIALAERRGRTPKL 152

Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKS-- 171
            +  +  +  K             G   +       + +       G       +     
Sbjct: 153 AVRVNPDFDLKGSGMRMGGGAKPFGVDAERAAALARRVIEAGGEWRGWHIFAGSQALGAQ 212

Query: 172 --FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                 +A +    +           ++LGGG          +   + + +       + 
Sbjct: 213 ALIETQAATVDLAARLSEAVGAAPPLVNLGGGFGIPYFPGDERLDIRPIGDALGGMLDRR 272

Query: 229 --------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-----------V 269
                     +E G  +V       T ++D+ ++     +V      H           V
Sbjct: 273 ADILQDSAFAMELGRWLVGEAGVYLTRIVDVKKSQGETFVVVDGGLHHQLAASGNFGTVV 332

Query: 270 PDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
                   +      +      V G  C   D  G+     PV+ GD ++      Y  +
Sbjct: 333 RRNYPIAVANRFGEASAEDAVTVVGCLCTPIDRLGDKVALPPVEEGDLVAIFLAGAYGAS 392

Query: 330 RKN-WFNGINMPTIAVK 345
                F G   P   + 
Sbjct: 393 ASPAAFLGHPAPRELLI 409


>gi|152984562|ref|YP_001350471.1| ornithine decarboxylase [Pseudomonas aeruginosa PA7]
 gi|150959720|gb|ABR81745.1| ornithine decarboxylase [Pseudomonas aeruginosa PA7]
          Length = 387

 Score =  153 bits (387), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 52/361 (14%), Positives = 117/361 (32%), Gaps = 30/361 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+ +ID+Q + +  D           ++  A+K   A  + + L         +S+YE
Sbjct: 25  ETPFVVIDRQTIADAYDQLTDCF--PFARIYYAVKANPATEITELLRDKGSNFDIASIYE 82

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +    +   G E  +Y    K  +               ++ + L      A      + 
Sbjct: 83  LDKVLKTGVGPERISYGNTIKKSKDIRYFYEKGVRLFATDSEADLRNIAKAAPGAKVYVR 142

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177
           +        +        +   +        I +    +   G+ FH   + +    + A
Sbjct: 143 ILTE---GSTTADWPLSRKFGCQTDMAMDLLILARQLGLEPYGISFHVGSQQRDISVWDA 199

Query: 178 MLKNIEKEF----GHFITQIEWISLGGGIHFTD--KDYPVKDFCQRL----KEFSEKYSV 227
            +  ++  F          ++ I++GGG       K   ++ + + +    KE       
Sbjct: 200 AIAKVKVIFERLKEEDGIVLKMINMGGGFPANYITKTNDLETYAEEIIRFLKEDFGDDLP 259

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIY 282
           +I LEPG +++ N   L + V+ ++        + +          +       +     
Sbjct: 260 EIILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYADVGKFSGLIETMDESIKFPIWT 319

Query: 283 PNTGP-YTAMVCGRSCLAGDIF---GEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337
              G     ++ G +C + DI     ++     +  GDR+ +     Y  +     FNG 
Sbjct: 320 EKQGEMEEVVIAGPTCDSADIMYEHYKYGLPLNLSSGDRLYWLSTGAYTTSYSAVEFNGF 379

Query: 338 N 338
            
Sbjct: 380 P 380


>gi|170751044|ref|YP_001757304.1| ornithine decarboxylase [Methylobacterium radiotolerans JCM 2831]
 gi|170657566|gb|ACB26621.1| Ornithine decarboxylase [Methylobacterium radiotolerans JCM 2831]
          Length = 388

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 46/364 (12%), Positives = 106/364 (29%), Gaps = 33/364 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   + +N             ++  A+K   A  +   L +      ++S+ E+ 
Sbjct: 21  PVMVLDLDVVRDNYTAFARSL--PDTRVFYAVKANPAPEVLRLLAEMGSCFDTASVAEME 78

Query: 65  LGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKA---QKLHKKI 118
           +        +  ++    K       A+         +  +++ K    A        +I
Sbjct: 79  MVLAAGATADRISFGNTIKKERCIGRALKLGIRLFAVDCQAEVEKIARAAEAVDVPAGEI 138

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFS 176
            +                 +              +  + +   G+ FH   +  +   + 
Sbjct: 139 RVFCRILCDGVGADWPLSRKFGCVPEMAADVLEHAHRQGLEAYGISFHVGSQQGNTEAWD 198

Query: 177 AMLKNIEKEFGHF---ITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYS----V 227
             L +    F         +  ++LGGG           V+ + + +     K+      
Sbjct: 199 GALGSAAAVFRECAERGIGLSMVNLGGGFPTKYLKAVPGVESYGEAIFRGLTKHFGNQIP 258

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENI---------KNLVIVDSSVEAHVPDYLLYQES 278
           +  +EPG  +V N   +   V+ +S               +     +   + + + Y   
Sbjct: 259 ETIIEPGRGMVGNAGLIEAEVVLVSRKSADADEVRWVYLDIGKFGGLAETMDEAIRYPIR 318

Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRKNW-F 334
            T          ++ G +C + D+  E         + IGD++  E    Y        F
Sbjct: 319 -TARDGDATEPCVIAGPTCDSVDVLYERQLYPLPVSLSIGDKVLIEGAGAYTTTYAAVAF 377

Query: 335 NGIN 338
           NG  
Sbjct: 378 NGFP 381


>gi|56695279|ref|YP_165627.1| decarboxylase, pyridoxal-dependent [Ruegeria pomeroyi DSS-3]
 gi|56677016|gb|AAV93682.1| decarboxylase, pyridoxal-dependent [Ruegeria pomeroyi DSS-3]
          Length = 393

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 58/362 (16%), Positives = 113/362 (31%), Gaps = 24/362 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  +ID Q +             AG  +  A+K      +  TL +      ++S  E+ 
Sbjct: 35  PTLVIDTQAVARQFAALAQGLGRAG--IHYAVKANPLPEILSTLARLGSNFDAASRVEIE 92

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           L        +  ++    K     A        +F   ++    K  A     K+ +R+ 
Sbjct: 93  LCLAAGASADRISFGNTVKKPADIAWAHAAGIALFAADAEDELDKIAAHAPGAKVYIRMI 152

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA---MLK 180
                + + L+              D   S   +  GL FH   + +    +      + 
Sbjct: 153 VEACQADWPLSRKFGCAPDKAIAVLDYARSVGLDPVGLSFHVGSQTRRAEMWVPVLDQVA 212

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEKYSV--QIYLEPGE 235
            +          +  +++GGG           P     + ++   E++    QI  EPG 
Sbjct: 213 AVWHAARAAGHDLSLLNIGGGFPAFYGQEVDAPELYAAEVIRLVGERFGDVGQIMAEPGR 272

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPNTGP 287
            +V     +   VL +S    + +           S +   + + + YQ   T   +   
Sbjct: 273 GMVAEAGAIAAEVLLVSRKSGHDLHRWVYLDIGKFSGLAETMDEAIRYQF-LTEREHEPT 331

Query: 288 YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIA 343
              ++ G SC + D+  E         ++ GDRI   +   Y     +  FNG     + 
Sbjct: 332 GPCILAGPSCDSADVLYEKKPVQLPLGLRDGDRIVIRNCGAYTSTYASVGFNGFPPLDVV 391

Query: 344 VK 345
             
Sbjct: 392 AI 393


>gi|328769068|gb|EGF79113.1| hypothetical protein BATDEDRAFT_35584 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 468

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 57/404 (14%), Positives = 106/404 (26%), Gaps = 66/404 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+++ D   ++        +     V+   A+KC     +  TL     G   +S  E+ 
Sbjct: 63  PFFVADLGDVVRQHQQWKALLPR--VEPFYAIKCNPDPAILQTLAGLGTGFDCASKAEID 120

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +  E         Y    K          C+  +    +    +K K      K+ LRI 
Sbjct: 121 MVLEQGVDPSRIIYANPCKQASHIRHAGACNVKVMTFDNADELYKIKQAMPSAKMVLRIL 180

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S S                           +V G+ FH          FS  +    
Sbjct: 181 TDDSRSVCRFGIKFGASLAAVPSLLRTARELDIDVIGISFHVGSGCYDASAFSEAVLLAR 240

Query: 184 KEFG---HFITQIEWISLGGGIH-FTDKDYPVKDFCQRLKEFSEKYSV---QIYLEPGEA 236
           K F            + +GGG    + +     D  + L+   +       ++  EPG  
Sbjct: 241 KAFDIGQALDFNFTLLDIGGGFPGRSTEGIQFTDVARLLRPVIDDNFPETVRVIAEPGRY 300

Query: 237 IVTNTTTLNTTVLDIS-------------------------------------------- 252
             ++  TL   +                                                
Sbjct: 301 FASSAFTLAVNIFARRVVLRDTIESTTASSEFGKDSPTTVSSQLSLDSECNPTNANEHPS 360

Query: 253 ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT------------GPYTAMVCGRSCLAG 300
                   +  S      D+ + +    +                  ++  + G +C + 
Sbjct: 361 YMYYINDGMYGSFNCLTFDHAVVKAIPLVRQGEYLFDSPEVSDSMPQFSCSIWGPTCDSI 420

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344
           D  G       +KIGD + F ++  Y +   + FNG    T+  
Sbjct: 421 DCIGRECLLPMMKIGDWLYFSNMGAYTMAAASAFNGFEKSTVLY 464


>gi|219119576|ref|XP_002180545.1| ornithine decarboxylase 2 [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217408018|gb|EEC47953.1| ornithine decarboxylase 2 [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 390

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 57/385 (14%), Positives = 125/385 (32%), Gaps = 56/385 (14%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y++D   L++ +     +     V+   A+KC     +  TL         +S  E+ L
Sbjct: 7   FYVVDIGVLVSQVYQWRRVFPR--VEPFYAVKCNPDPLIVKTLATLGCNFDCASRNEIRL 64

Query: 66  GHEKFG-----GETHAYNVAYKDCEIDAVLSNCDTII-FNTVSQLNKFKDKAQKLHKKIG 119
             E         +    N       +   +     ++ F+   ++ K    ++ +   + 
Sbjct: 65  VMEATKDMPTKPDIIYANPCKSRLGLLEAVCKGVKMVTFDNEMEVQKCASISKNIQLVLR 124

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN---VNGLMFHNNCENKSFLCFS 176
           +  +   S         +  F     K +  + +  K+   V G+ FH     +    + 
Sbjct: 125 IITDDRGS-----QCRLSSKFGAPRHKWRLLLAAAQKHGLQVVGVSFHVGSGCRDASRYE 179

Query: 177 AMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYL-- 231
           A LK+  + F   G +   ++ + +GGG            +   + E       +++   
Sbjct: 180 AALKDAREIFDLAGEYGMNMQVLDIGGGFPGETHRDGHFMYFTEIAEQVAPLIDEMFPPS 239

Query: 232 -----EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-----HVPDYL-------- 273
                EPG   V    TL  +V+    N  N      +++      ++P           
Sbjct: 240 VRIIGEPGRYFVAACATLCCSVIAARTNEMNSSFEPEAIDDKEAAENLPPLQDDYSYYIN 299

Query: 274 --LYQESATIYPNTGPYTAMV--------------CGRSCLAGDIFGEFHFEKPVKIGDR 317
             +Y     I  +       +               G +C + D+         +K+GD 
Sbjct: 300 DGVYGAFNNIMFDHATVRPRILGPGEKIVATEEDVFGPTCDSIDVIARSVLLPKLKVGDY 359

Query: 318 ISFEDVAGYNINRKNWFNGINMPTI 342
           + F+++  Y +   + FNG   P+ 
Sbjct: 360 MYFQNMGAYTMAAASSFNGFT-PSE 383


>gi|71908053|ref|YP_285640.1| Orn/DAP/Arg decarboxylase 2 [Dechloromonas aromatica RCB]
 gi|71847674|gb|AAZ47170.1| Orn/DAP/Arg decarboxylase 2 [Dechloromonas aromatica RCB]
          Length = 412

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 53/376 (14%), Positives = 108/376 (28%), Gaps = 34/376 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+Y  D++ L   +     +   AG+KL  A+K      +   +   +DG   +S  E
Sbjct: 38  QTPFYAYDRELLRTRVRELKAVLP-AGIKLHYAMKANPMPALVAFMASLVDGIDVASGGE 96

Query: 63  VMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           + +  +      E        +D E+   ++    I   +  +L+     + +L     +
Sbjct: 97  MKVALDAGGVPQEISFAGPGKRDAELRQAVAAGVLINVESFRELDLLARISTELGLPARV 156

Query: 121 RINPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173
            +  +     K           + G   +        I     +  G       +N    
Sbjct: 157 AVRVNPDFELKGSGMKMGGGPKQFGVDAEQVPLLLARIGELKLSFEGFHLFAGSQNLKPE 216

Query: 174 CFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                 +   +       H  + + +++LGGG                + +   + + + 
Sbjct: 217 SICEAQQKSYELALALSRHAPSPVRFLNLGGGFGIPYFPGERPLDLSSIGDNLAQLASRA 276

Query: 229 --------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-------- 272
                   + +E G  +V       + ++D   +     +V      H            
Sbjct: 277 AQDFPLASLVIELGRYLVGEAGIYVSRIIDRKISRGQTYLVTDGGLNHHLSASGNFGQVI 336

Query: 273 -LLYQESATIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
              Y  S     N      A V G  C   DI G+         GD +       Y  + 
Sbjct: 337 RKNYPVSIGNRMNAEDIEIATVVGPLCTPLDILGDRMALSVAMPGDLVVVFQSGAYGASA 396

Query: 331 KNW-FNGINMPTIAVK 345
               F G    T  + 
Sbjct: 397 SPQSFLGHPEVTEVLV 412


>gi|325970023|ref|YP_004246214.1| ornithine decarboxylase [Spirochaeta sp. Buddy]
 gi|324025261|gb|ADY12020.1| Ornithine decarboxylase [Spirochaeta sp. Buddy]
          Length = 397

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 53/359 (14%), Positives = 116/359 (32%), Gaps = 26/359 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+ LI    +       L        K+  A+K   A  +   L++       +S+YE
Sbjct: 35  ETPFQLILSDVIEEKYQELLDAI--PFAKIYYAVKANPAPAVLSLLDRLGSNFDVASVYE 92

Query: 63  VMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +    E     +  +        +   +   +     + ++   L      A      + 
Sbjct: 93  LRRLQELGISADRMSCGNTIKKFEHIKEFYAAGIRLFVTDSEGDLRNIAMAAPGSKIMVR 152

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS--- 176
           L    + +   + L+        L                GL FH   + +    +    
Sbjct: 153 LMTEGAQTA-DWPLSRKFGCSPDLAGDLLILARKLGLQPWGLSFHVGSQQRDITAWDSAL 211

Query: 177 -AMLKNIEKEFGHFITQIEWISLGGGIHFTDKD--YPVKDFCQRLKEFSEKYS----VQI 229
             +         +   ++  I++GGG   T ++   PV+ +   +K + E+       +I
Sbjct: 212 SKVSYLFTWLLENEDLKLSCINMGGGFPATYRERTNPVQTYADEIKRYLEEDYGDILPEI 271

Query: 230 YLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
            +EPG ++V ++  L + ++ IS        + +          +           +   
Sbjct: 272 IIEPGRSLVGDSGVLVSEIVLISRKSRTALERWVYQDCGRFGGLMETLGEAIHYPILCER 331

Query: 285 TGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338
            GP    ++ G +C + D   E +       + +GDR+ +     Y  +     FNG  
Sbjct: 332 NGPLEQVILAGPTCDSMDTLYEDYRYELPLSLAVGDRLYWLSTGAYTSSYSAIEFNGFP 390


>gi|15599715|ref|NP_253209.1| ornithine decarboxylase [Pseudomonas aeruginosa PAO1]
 gi|107099896|ref|ZP_01363814.1| hypothetical protein PaerPA_01000917 [Pseudomonas aeruginosa PACS2]
 gi|116052549|ref|YP_792864.1| ornithine decarboxylase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218893611|ref|YP_002442480.1| ornithine decarboxylase [Pseudomonas aeruginosa LESB58]
 gi|254238823|ref|ZP_04932146.1| hypothetical protein PACG_04987 [Pseudomonas aeruginosa C3719]
 gi|254244669|ref|ZP_04937991.1| hypothetical protein PA2G_05538 [Pseudomonas aeruginosa 2192]
 gi|296391234|ref|ZP_06880709.1| ornithine decarboxylase [Pseudomonas aeruginosa PAb1]
 gi|313107163|ref|ZP_07793363.1| ornithine decarboxylase [Pseudomonas aeruginosa 39016]
 gi|9950761|gb|AAG07907.1|AE004866_1 ornithine decarboxylase [Pseudomonas aeruginosa PAO1]
 gi|115587770|gb|ABJ13785.1| putative ornithine decarboxylase [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126170754|gb|EAZ56265.1| hypothetical protein PACG_04987 [Pseudomonas aeruginosa C3719]
 gi|126198047|gb|EAZ62110.1| hypothetical protein PA2G_05538 [Pseudomonas aeruginosa 2192]
 gi|218773839|emb|CAW29653.1| ornithine decarboxylase [Pseudomonas aeruginosa LESB58]
 gi|310879865|gb|EFQ38459.1| ornithine decarboxylase [Pseudomonas aeruginosa 39016]
          Length = 387

 Score =  153 bits (386), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 53/361 (14%), Positives = 117/361 (32%), Gaps = 30/361 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+ +IDKQ + +  D           ++  A+K   A  + + L         +S+YE
Sbjct: 25  ETPFVVIDKQTIADAYDQLTDCF--PFARIYYAVKANPATEITELLRDKGSNFDIASIYE 82

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +    +   G E  +Y    K  +               ++ + L      A      + 
Sbjct: 83  LDKVMKTGVGPERISYGNTIKKSKDIRYFYEKGVRLFATDSEADLRNIAKAAPGAKVYVR 142

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177
           +        +        +   +        I +    +   G+ FH   + +    + A
Sbjct: 143 ILTE---GSTTADWPLSRKFGCQTDMAMDLLILARQLGLEPYGISFHVGSQQRDISVWDA 199

Query: 178 MLKNIEKEF----GHFITQIEWISLGGGIHFTD--KDYPVKDFCQRL----KEFSEKYSV 227
            +  ++  F          ++ I++GGG       K   ++ + + +    KE       
Sbjct: 200 AIAKVKVIFERLKEEDGIVLKMINMGGGFPANYITKTNDLETYAEEIIRFLKEDFGDDLP 259

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIY 282
           +I LEPG +++ N   L + V+ ++        + +          +       +     
Sbjct: 260 EIILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYADVGKFSGLIETMDESIKFPIWT 319

Query: 283 PNTGP-YTAMVCGRSCLAGDIF---GEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337
              G     ++ G +C + DI     ++     +  GDR+ +     Y  +     FNG 
Sbjct: 320 EKQGEMEEVVIAGPTCDSADIMYEHYKYGLPLNLASGDRLYWLSTGAYTTSYSAVEFNGF 379

Query: 338 N 338
            
Sbjct: 380 P 380


>gi|302345615|ref|YP_003813968.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein
           [Prevotella melaninogenica ATCC 25845]
 gi|302149026|gb|ADK95288.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein
           [Prevotella melaninogenica ATCC 25845]
          Length = 395

 Score =  153 bits (386), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 67/388 (17%), Positives = 135/388 (34%), Gaps = 25/388 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           + TP +++D+Q + +N+            K  +  ++K  +   +              S
Sbjct: 6   LHTPCFILDEQDVAHNICEFKTALSTYFAKSIIGYSVKTNSLPYILKIAKDNGCYAEVVS 65

Query: 60  LYEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            +E  L  +  F  +   YN            + +   +   T  +++   D  +    +
Sbjct: 66  YHEYQLALKVGFQKDHIIYNGPMKSKETFLDAIKHRAIVNIETWREVDWLDDLPKDQVYE 125

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168
           IG+RIN + S       D     SR G   +           ++     + G+  H   +
Sbjct: 126 IGIRININTSLVSPEDEDHPEDDSRFGFSFESGELDKVINLILKKNNIKIVGIHSHREPK 185

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD---YPVKDFCQRLKEFSEKY 225
            +S   +  ++  +++    +   +++  LGGG      +   Y             +  
Sbjct: 186 TRSVRFYERVICYVQEIILKYNLSLKYWDLGGGFFGCMPNKPTYDEYSKAFFNALDVKLR 245

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285
            +   +EPG AIV +       V+DI ++     +        +  +    +    +   
Sbjct: 246 DITFIVEPGNAIVASGFDYVAEVIDIKDHDGKTYVCTDGTRNDIDPFFRKSDYFKEFCCQ 305

Query: 286 GPYTAM------VCGRSCLAGD-IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
           G  +        V G +CL  D +F     E+ + IGDR+ F  V  Y ++    F    
Sbjct: 306 GDISVFSQLPQVVSGLTCLEYDRMFTIPAGERKLNIGDRVIFHRVGAYTMSLTPLFIHY- 364

Query: 339 MPTIAVKNVDGTIKAIREFSYND-YYNN 365
            PTI +K+  G +  IRE    D +   
Sbjct: 365 FPTIYLKDSKGHLFVIREEWCEDEFIQK 392


>gi|66045821|ref|YP_235662.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2
           [Pseudomonas syringae pv. syringae B728a]
 gi|63256528|gb|AAY37624.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2
           [Pseudomonas syringae pv. syringae B728a]
          Length = 402

 Score =  153 bits (386), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 58/385 (15%), Positives = 121/385 (31%), Gaps = 35/385 (9%)

Query: 2   IKT-PY--YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
           ++T P   +  D   L  ++   +     AGV+L  A+K  +   M +TL   + G   S
Sbjct: 18  LETDPLAAFFYDLDALQQHVSEVMAALP-AGVELYYAIKANSEALMLETLAPLVSGFEIS 76

Query: 59  SLYEVMLGHEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
           S  E+         + + ++     D ++ + L N    I   +++++ + +  A++  +
Sbjct: 77  SGGEIERVMACPTRKPYVFSGPGKLDSDLRSALLNKVEAIHLESLNEIARLQQLAEQAGR 136

Query: 117 KIGLRINPSVS---------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
              + +  +                        + L E  +    +    + G   H   
Sbjct: 137 VQPVFLRINPQLPAAQSSRLAMAGTATPFGIDEADLAEAVRRVDNASHLTLKGFHVHAMS 196

Query: 168 ENKSFLCFSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRL 218
              S      +L    + +  +        Q+   ++GGGI       + +  +  C+ L
Sbjct: 197 HQMSVERHEQLLDFYLQRWQEWKALARDPSQLTHFNVGGGIGVDYLNSQQFDWQRLCRYL 256

Query: 219 KEFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLY 275
           ++   +      L  EPG  I          VLD   +     +V               
Sbjct: 257 EKRLGEQHDAPILRFEPGRFISAYCGYYAIEVLDSKTSHGEHFLVCRGGTHQFRLPVAQS 316

Query: 276 QESATIYPNTGPYT-------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
            +   I+  + P           + G+ C   D+       K V IGD +       Y  
Sbjct: 317 HDHPVIHLPSTPQPAASSEQAYTIVGQLCTPKDVLSRRQPLKGVNIGDLLVLPLAGAYGY 376

Query: 329 NRKN-WFNGINMPTIAVKNVDGTIK 352
           N  +  F     P+         ++
Sbjct: 377 NISHADFLCHPRPSQHFVRNGERVR 401


>gi|320535387|ref|ZP_08035501.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein
           [Treponema phagedenis F0421]
 gi|320147789|gb|EFW39291.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein
           [Treponema phagedenis F0421]
          Length = 389

 Score =  153 bits (386), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 51/363 (14%), Positives = 110/363 (30%), Gaps = 29/363 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TP  +I+ +K+  N      +       +  A+K      +   L         +S Y
Sbjct: 22  LQTPCVIINLEKIKKNYLELKQLF--PDADIYYAMKANPHEEILKLLIGLGANFDIASRY 79

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+          E  +Y    K  +  A            ++   L      + +    +
Sbjct: 80  ELDKILSLGVPPECLSYGNTIKKAKDIAYFYEKGVRLFATDSKEDLKNLAKYSPQSRVFV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
            + +  + S   + L+        +        +       G+ FH   + +    +   
Sbjct: 140 RILVENTNSA-DWPLSRKFGCHPDMAYDLCVLAKEMGLIPYGISFHVGSQQRDIGQWDDA 198

Query: 179 LKNIEKEFG----HFITQIEWISLGGGIHFTDKD------YPVKDFCQRLKEFSEKYSVQ 228
           +   +            ++E I++GGG                ++  + L +        
Sbjct: 199 IAKTKYLMRSLEEEEDIKLEMINMGGGFPAPYITPTNKLSEYAREITRYLDDDFGNEKPH 258

Query: 229 IYLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYP 283
           I LEPG ++V ++  L T ++ IS        + + +                +      
Sbjct: 259 IILEPGRSLVGDSGVLVTEIITISRKNNTALHRWVYVDAGVFNGLTETLNENIKYPIFTS 318

Query: 284 NT----GPYTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFN 335
                      ++ G +C + DI  E +       +K GDR+ F     Y  +  +  FN
Sbjct: 319 KDESAGKWGEVVLAGPTCDSMDIMYEDYKYTMPISLKSGDRLYFLSTGAYTASYASVEFN 378

Query: 336 GIN 338
           G  
Sbjct: 379 GFP 381


>gi|282801751|gb|ADB02854.1| AzicN [Kibdelosporangium sp. MJ126-NF4]
          Length = 396

 Score =  152 bits (385), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 60/382 (15%), Positives = 115/382 (30%), Gaps = 31/382 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP Y+ D  ++  N    +       V L  +LK      +   + +        S  E
Sbjct: 7   ETPAYVYDLAEVRANQTALVRALPEKSV-LYYSLKANPHPDLLAEIRKGGARAEVCSRGE 65

Query: 63  VMLGHEKFGG--ETHAYNVAYKDCEIDAVLS-NCDTIIFNTVSQLNKFKDKA-QKLHKKI 118
           +           +        +D ++   +         ++V+ L++    A  +  +  
Sbjct: 66  LDAALAAGWPVDDVLYTGPGKRDQDLAYAIELGVRKFSVDSVTGLDQLDRVAAVQATEVR 125

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGE-------KCKDKIESEIKNVNGLMFHNNCENKS 171
            L                    S+ G        + +         V+GL  +      +
Sbjct: 126 CLLRINDDQPVPGQGLVMTGVASQFGADTSWVLAEPERFAGRPHVIVSGLHLYMGTNLAT 185

Query: 172 FLCFSAMLKNIEKE-------FGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKE 220
                A  +                   +  + LGGG             +      L  
Sbjct: 186 VDDLVAQFRRSLDTGIRLTEVLRQHGADMHMLDLGGGFGAPFARGGAAVDLAGLKDELDR 245

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280
             + + + I  E G  +V    TL TTVLD+ ++    V+V  S   H+      +    
Sbjct: 246 MLDGHDLFIAFESGRYLVGTAGTLYTTVLDVKQSHGKRVLVLDSGINHLGGMSGLRRLPP 305

Query: 281 IYP-----NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-- 333
           + P     +     AM+ G  C   D++        VK GD ++  +V  Y +   +   
Sbjct: 306 LVPDVLADHGELADAMLAGPLCTPLDLWARSAPVGEVKPGDVLAIPNVGAYGL-YASLVA 364

Query: 334 FNGINMPTIAVKNVDGTIKAIR 355
           F G  +P   V + D   +  R
Sbjct: 365 FLGHPLPVEVVVDGDAPPRISR 386


>gi|37677184|ref|NP_937580.1| diaminopimelate decarboxylase [Vibrio vulnificus YJ016]
 gi|37201729|dbj|BAC97550.1| diaminopimelate decarboxylase [Vibrio vulnificus YJ016]
          Length = 411

 Score =  152 bits (385), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 105/357 (29%), Gaps = 17/357 (4%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  L+D   +               V L  ALK      +  TL         ++  EV 
Sbjct: 48  PLLLLDCDVIRQQYRALKNAL--PNVTLHYALKPLPHPVVVRTLLAEGASFDLATTGEVE 105

Query: 65  L-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           L   E    E   +    K              +F   +     K KA +   ++ +R++
Sbjct: 106 LVASEGVPAELTIHTHPIKRDADIRDALAYGCNVFVVDNLNELEKFKAYRDEVELLVRLS 165

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE----NKSFLCFSAML 179
              S +   L+              +  +     + GL FH   +    NK         
Sbjct: 166 FRNSEAFADLSKKFGCSPEQALVIIETAKEWNIRIKGLSFHVGSQTTNPNKYVEAIHTCR 225

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYSVQIYL--EPGE 235
             +E+     +  +  + +GGG       +  P+  FC  + E        +++  EPG 
Sbjct: 226 HVMEQVVERGLPALSTLDIGGGFPVNYTQQVMPIDQFCAPINEALSLLPETVHVLAEPGR 285

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGPYTA 290
            I     T   +V+  +E    +          S    + D   Y    TI        +
Sbjct: 286 FICAPAVTSVASVMGQAEREGQIWYYLDDGIYGSFSGLMFDDARYPL-TTIKQGGELIPS 344

Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
           ++ G +C + D+  E      +  GD +    +  Y       FN          N 
Sbjct: 345 VLSGPTCDSVDVIAENILLPKLNNGDLVIGRTMGAYTSATATDFNFFKRAQTIALNE 401


>gi|1706324|sp|P49725|DCOR_PANRE RecName: Full=Ornithine decarboxylase; Short=ODC
 gi|758642|emb|CAA57683.1| ornithine decarboxylase [Panagrellus redivivus]
 gi|1200128|emb|CAA65024.1| ornithine decarboxylase [Panagrellus redivivus]
          Length = 435

 Score =  152 bits (385), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 56/386 (14%), Positives = 114/386 (29%), Gaps = 37/386 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+ +++   ++  +           V    A+KC     +  TL     G   +S  E+ 
Sbjct: 46  PFVVMNVSTIMAKVIQWQRTMPR--VAPCYAVKCNDDKVLLRTLADLGMGFDCASKAEIE 103

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                 G E   Y    K     A         + F++V +L K K         + + +
Sbjct: 104 KVIGLVGPEKIVYANPCKTRGFIAHAEAAGVKRMTFDSVEELTKIKQNHADPSLILRISV 163

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           +   +  +  +     P +   +  +        NV G+ FH          F   L+  
Sbjct: 164 SDPTAQCQLGIKFGCDPETVAPKLLRKAA-DMGMNVIGISFHVGSGCNEPATFRTALEYA 222

Query: 183 EKEFG---HFITQIEWISLGGGIHFTDKDY-PVKDFCQRLKEFSEKYSV-------QIYL 231
              F         +  + +GGG    D  +  +      +    E+          ++  
Sbjct: 223 RGLFDLGISLGLSMTLLDIGGGFPGVDTAHISLDACAAVINPALEELFPLDSCPDVEVIA 282

Query: 232 EPGEAIVTNTTTLNTTVL---------------DISENIKNLVIV---DSSVEAHVPDYL 273
           EPG        ++ T V+               D++ +     +      S    + D+ 
Sbjct: 283 EPGRYFACAAVSVTTNVIASVKVPASRITEKADDVNRDGYMYYMNDGVYGSFNCKLFDHY 342

Query: 274 LYQESATIYPN--TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
             +       +     +   V G +C   D   E      +  GD + + D+  Y     
Sbjct: 343 QPRGMPLAEHDADEPRFPVCVWGPTCDGLDQVEESSVMPRLYEGDWLYYPDMGAYTSVAA 402

Query: 332 NWFNGINMPTI-AVKNVDGTIKAIRE 356
           + FNG + P      +       +R+
Sbjct: 403 STFNGFDKPKTYYFIDEATLGSIVRK 428


>gi|24586472|ref|NP_477052.2| ornithine decarboxylase 1 [Drosophila melanogaster]
 gi|62512165|sp|P40807|DCOR1_DROME RecName: Full=Ornithine decarboxylase 1; Short=ODC
 gi|7304113|gb|AAF59150.1| ornithine decarboxylase 1 [Drosophila melanogaster]
 gi|20151407|gb|AAM11063.1| GH13851p [Drosophila melanogaster]
 gi|220945166|gb|ACL85126.1| Odc1-PA [synthetic construct]
 gi|220954986|gb|ACL90036.1| Odc1-PA [synthetic construct]
          Length = 394

 Score =  152 bits (385), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 56/357 (15%), Positives = 103/357 (28%), Gaps = 23/357 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
             + D   +   L     +     +K   A+KC     +   L Q   G   +S  EV L
Sbjct: 33  LNICDLSSVERKLRLWQKLLPR--IKPFYAVKCNDDPMVVRLLAQLGAGFDCASKNEVKL 90

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   +    +                   ++   +K      +  + +R   
Sbjct: 91  VLGFDVSPERIIFANPCRPVSHLEYAKEHQVSNGTVDNEFEVYKLHTHYPNSNLIVRFKS 150

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKI-ESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
               ++  L D     + +       + +S    V G  FH          +   +K  +
Sbjct: 151 EAKEAQCPLGDKFGCDADVDAAALMLLAKSLELKVTGTSFHVGSGCSELQAYDRAIKKAK 210

Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEKYSVQIYLEPGEAI 237
             F         ++++ +GGG   +D     K        ++       V I  EPG   
Sbjct: 211 NLFKFGALLGYDMDFLDIGGGFPGSDDVKFEKIAESVNTSVQRHFPDERVHIIAEPGRFF 270

Query: 238 VTNTTTLNTTVLDISE-----------NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286
           V    TL   +    E                  V  S    + D+ +      +     
Sbjct: 271 VAAACTLVCKIHAKREIRNEAGKLDTVMYYLNDGVYGSFNCILYDHQVVIAEHYLDNAES 330

Query: 287 PY--TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                +++ G SC A D   E      +  GD + F ++  Y +   + FNG  +P 
Sbjct: 331 LPHLKSLIWGPSCDALDKISEDLHLPNLNRGDLLGFRNMGAYTMPIASAFNGFEVPK 387


>gi|330807503|ref|YP_004351965.1| diaminopimelate decarboxylase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375611|gb|AEA66961.1| Putative ornithine decarboxylase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 387

 Score =  152 bits (385), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 55/359 (15%), Positives = 116/359 (32%), Gaps = 26/359 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+ +ID   +    D      +    K+  A+K   A  + D L         +S+YE
Sbjct: 25  ETPFVVIDTAMISQAYDDLRAGFEF--AKVYYAVKANPAVEIIDLLKDKGSNFDIASIYE 82

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +        G +  +Y    K              ++ T S+ +  ++ A+         
Sbjct: 83  LDKVMSRGVGPDRISYGNTIKKSRDIRYFYEKGVRLYATDSEAD-LRNIAKAAPGSKVYV 141

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179
              +   +        +   +        I +    +   G+ FH   + +    + A +
Sbjct: 142 RILTEGSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDAAI 201

Query: 180 KNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSVQI 229
             ++  F          ++ I++GGG                ++  + LKE       +I
Sbjct: 202 AKVKVIFERLKEEDGIVLKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDDLPEI 261

Query: 230 YLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
            LEPG +++ N   L + V+ ++        + +          +       +       
Sbjct: 262 ILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIETMDEAIKFPIWTEK 321

Query: 285 TGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338
            G     ++ G +C + DI  E +       + IGDR+ +     Y  +     FNG  
Sbjct: 322 KGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLYWLSTGAYTTSYSAVEFNGFP 380


>gi|225572465|ref|ZP_03781329.1| hypothetical protein RUMHYD_00762 [Blautia hydrogenotrophica DSM
           10507]
 gi|225040102|gb|EEG50348.1| hypothetical protein RUMHYD_00762 [Blautia hydrogenotrophica DSM
           10507]
          Length = 432

 Score =  152 bits (385), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 57/400 (14%), Positives = 131/400 (32%), Gaps = 54/400 (13%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +YL D++K+++++           ++ L ++KC +   + +++     G  ++S  EV  
Sbjct: 28  FYLYDERKIVDSIRRLKQHF--PNIEFLYSIKCNSNPYVINSVFAQGLGADAASAGEVRK 85

Query: 66  G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y+ A K  E          +I +++ ++ + +  A+  +  + + I  
Sbjct: 86  AVAAGQKKEKIYYSAAGKSMEDIESTMESAVLIADSIEEIKRIQFAAKHRNLVVEIGIRI 145

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSFL----C 174
           +     F         S+ G   ++ +    +N      V G+  H   +  +       
Sbjct: 146 NP---NFSFYKNEGMPSKFGIDEEEALAFLRENRFPNVRVTGIHVHLRSQELNTELLARY 202

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP---------VKDFCQRLKEFSEKY 225
           +  +L+   +        ++++++G G+                         +   E  
Sbjct: 203 YENVLELARRVQKVTDVSLDYVNMGAGMGIPYAVKDRALNLKELGQSVEAAVARFREEFP 262

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPD--------YLLYQ 276
            ++  +E G  +V       T V+D   +     I+  +++   +          Y   Q
Sbjct: 263 GIRAMIETGRHVVGKAGVYVTKVMDRKVSHAKTYIILKNTLNGFIRPSLACLVERYWQGQ 322

Query: 277 ESA----------------TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
           +S                 T+          + G  C A DI  E      ++ GD +  
Sbjct: 323 QSPEGSEPLFTGTDAFQFLTLRERKPAERVDLVGNLCTATDIIAENLVMPRLECGDVVVI 382

Query: 321 EDVAGYNINRKN-WFNGINMPTIAVKNVDGTIKAIREFSY 359
            +   Y        F+    P     N DG +    E S+
Sbjct: 383 TNAGAYAAVLSPVQFSTQIRPIELFLNEDGNVV---EESF 419


>gi|225556784|gb|EEH05072.1| ornithine decarboxylase [Ajellomyces capsulatus G186AR]
          Length = 446

 Score =  152 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 56/360 (15%), Positives = 102/360 (28%), Gaps = 32/360 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y+ D  ++               VK   A+KC     +   +    +G   +S  E+ 
Sbjct: 69  PFYIADLGQVYRQHVRWKKNLGR--VKPFYAVKCNPDPQVLRLMANLGNGFDCASKAEID 126

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                        Y    K        S          +    +K K      ++ LRI 
Sbjct: 127 CALGAGVDPSRIIYAQPCKTKSYLRYASQVGVKQMTFDNSDELYKIKEMCPEAELYLRIL 186

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S S   L+        +     +  +    NV G+ FH     +    F   +++  
Sbjct: 187 TDDSASLCRLSMKFGASLSITRSLLELAKELKLNVIGVSFHVGSGAEDPRSFVKAVEDSR 246

Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
             F         ++ + +GGG      +         L E    + +++  EPG   V +
Sbjct: 247 YVFDQAAEVGFDLKVLDVGGGFSEDTFERFAATLGDALDEHFPPH-IRVIAEPGRYYVAS 305

Query: 241 TTTLNTTVLD----------------------ISENIKNLVIVDSSVEAHVPDYLLYQES 278
             TL   V+                       I  N        + +  H          
Sbjct: 306 AFTLAANVIARRDVSLEMSDSESTSSATEAYMIYLNDGVYGNFSNIIFDHQHPVPQILTM 365

Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGI 337
            +      P    + G +C   D+  E       + +G+ + FE++  Y       FNG 
Sbjct: 366 ESPVC--TPIEYSIWGPTCDGIDLITERITLPGALDVGNWLYFENMGAYTKCSATCFNGF 423


>gi|154253672|ref|YP_001414496.1| Orn/DAP/Arg decarboxylase 2 [Parvibaculum lavamentivorans DS-1]
 gi|154157622|gb|ABS64839.1| Orn/DAP/Arg decarboxylase 2 [Parvibaculum lavamentivorans DS-1]
          Length = 433

 Score =  152 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 45/368 (12%), Positives = 113/368 (30%), Gaps = 29/368 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P  ++D   + +N             ++  A+K   A  +   L        ++S+ 
Sbjct: 71  LPSPCLVVDVDIVAHNFGELASSL--PDARIFYAVKANPADEIVSRLAGLGSSFDTASMG 128

Query: 62  EVMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+ L        +  ++      +     A         F++ ++L+K    A     K+
Sbjct: 129 EIDLCLSHGVSADRLSFGNTIKKERDIAAAYAKGVRMFAFDSTAELDKIARVA--PGSKV 186

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
             R+      +++ L+        +      + ++   +  G+ FH   +      +   
Sbjct: 187 YCRVLMECEGAEWPLSRKFGCEPAMAVDLLVRAKALGLDAYGVSFHVGSQQTDLTQYDKA 246

Query: 179 LKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQI 229
           L      F        ++  +++GGG     +              + L          +
Sbjct: 247 LALSLSLFRDLEARGVKLRMVNMGGGFPSRYRTDVPSISAYGAAIREALLRHFGDSQPDV 306

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATI 281
            +EPG  +V +   +   V+ +SE   +               +   + + + Y+   + 
Sbjct: 307 IVEPGRGVVGDAGVIQAEVVLVSEKGGDDARRWVYLDAGKFHGLAETMDEAIKYRLLTSR 366

Query: 282 YPNTGPYTAMVCGRSCLAGDIFG---EFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337
                    ++ G +C + DI     ++     ++ GD++       Y        FNG 
Sbjct: 367 DGGETS-PVVLAGPTCDSADILYEKTDYRLPSELEAGDKVWILATGAYTTTYSAVAFNGF 425

Query: 338 NMPTIAVK 345
                   
Sbjct: 426 PPLASVCI 433


>gi|300785523|ref|YP_003765814.1| diaminopimelate decarboxylase [Amycolatopsis mediterranei U32]
 gi|299795037|gb|ADJ45412.1| diaminopimelate decarboxylase [Amycolatopsis mediterranei U32]
          Length = 427

 Score =  152 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 59/394 (14%), Positives = 106/394 (26%), Gaps = 33/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP YL D    L      L  R + GV +  + K      +   L+    G   SSL E
Sbjct: 17  GTPLYLYDGDA-LRERYERLRERLHPGVDIFYSAKANPNVSVCALLHSLGAGLEISSLAE 75

Query: 63  VMLG-HEKF-GGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           ++        G +           E+ A       TI+  + ++L    +       K+ 
Sbjct: 76  LVTAERAGATGPDVIFLGPGKSTEELRACCERGVGTIVCESFAELAAVDELRPPATVKVM 135

Query: 120 LRINPSVSYSKFI-----LADPNRPFSRLGEKCKDKIESE-IKNVNGLMFHNNCEN---- 169
           LR+NP    +                  +    +D + +     V G   +         
Sbjct: 136 LRVNPESESAGSRLAMGGKPRQFGVDEEILRSSRDAVSALRHIRVTGFHAYLGTRILDAT 195

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC--------QRLKEF 221
                   +L+  E         +E + +GGG      D                 ++ F
Sbjct: 196 TIVRNTGTILELAESLAELLDIPLETVDIGGGWGVPYFDGEDDLDADAAIEGINAAVESF 255

Query: 222 SEKYS-VQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESA 279
            ++    ++  E G  +V            + E+  +  VI D     H+    +     
Sbjct: 256 LDRNPATRVITELGRYLVGWAGRYIVRARYVKESKGEWFVIADGGTNHHMAAVGIGSFVK 315

Query: 280 TIYPN--------TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
             +P                V G  C   D+  +  +   V  GD +       Y  +  
Sbjct: 316 RNFPIRALAGQDSPADRVYTVTGPLCTPNDVVAKRVWLPEVHPGDLLEVARSGAYGPSAS 375

Query: 332 N-WFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
              F     P   +             +  D   
Sbjct: 376 PVMFLSHGHPAEVLLLGGTAHLVRSRDTVEDLLR 409


>gi|319789913|ref|YP_004151546.1| Orn/DAP/Arg decarboxylase 2 [Thermovibrio ammonificans HB-1]
 gi|317114415|gb|ADU96905.1| Orn/DAP/Arg decarboxylase 2 [Thermovibrio ammonificans HB-1]
          Length = 450

 Score =  152 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 59/394 (14%), Positives = 118/394 (29%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P ++  +++L N           +   V+   + K      +   L+   +     S 
Sbjct: 48  GSPLFVFSEKRLRNKFRELKNAFTLRYPNVEFSWSYKTNYLDAICAILHSEGETAEVVSE 107

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKI 118
           +E          G    YN  YK  +     +     I  +   ++   +  A +L  KI
Sbjct: 108 FEYEKARRLGVPGNQIIYNGPYKPLDSLRRAAREGARINIDHFEEIADLEQVADELGTKI 167

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKC---KDKIESEIKNVNGLMFHNNCENKSFLCF 175
            + I  ++                 G+     K         + GL  H          +
Sbjct: 168 KVGIRLNMDTGIKPQWSRFGFNLENGQALDAVKRIAAGGKLELVGLHCHIGTFILEPRAY 227

Query: 176 SAMLKNIEKEF----GHFITQIEWISLGGGIHFTD----------------KDYPVKDFC 215
              ++ + +        F  +IE++ +GGG    +                 ++  +   
Sbjct: 228 ENEVRKMVQFAYQVEEQFGFKIEYLDIGGGFPSKNRLKGVYLPPDVAVPSIDEFAERVCN 287

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLL 274
             L+        ++ LE G AIV     L TTV             V  +    +     
Sbjct: 288 ALLESLKPGDYPKLILESGRAIVDEAGFLITTVHASKRMPDGRRAYVLDAGVNILFTAFW 347

Query: 275 YQESATI--YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
           Y  +  +           ++ G  C+  D+  +     P+  G R+    V  YN+ +  
Sbjct: 348 YHFNVELDREVQGPSEPCILYGPLCMNIDVVDDAVQLPPLPRGTRLILSPVGAYNVTQWM 407

Query: 333 WFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNN 365
            F     P + +   +G +  IRE    +D    
Sbjct: 408 QFIRY-RPAVVLIGENGEVDLIREAEDLSDIVRR 440


>gi|114778271|ref|ZP_01453130.1| probable ornithine decarboxylase [Mariprofundus ferrooxydans PV-1]
 gi|114551373|gb|EAU53929.1| probable ornithine decarboxylase [Mariprofundus ferrooxydans PV-1]
          Length = 414

 Score =  152 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 52/359 (14%), Positives = 120/359 (33%), Gaps = 26/359 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+ ++D++ +  +    +        K+  A+K      +   L         +S YE
Sbjct: 51  ETPFVVLDRRIINEHYSELVDNFPY--AKIYYAIKANPDVEILSLLRDRGACFDVASTYE 108

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +          +  +Y    K C+           +F + ++ +  ++ A++        
Sbjct: 109 LDKVLGLGVSPDRCSYGNTIKKCKDIRYFYAKGIRLFASDAEAD-LRNIAREAPGAKVYI 167

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179
              +            +   +        I ++   +   G+ FH   + +    + A +
Sbjct: 168 RLLTEGSHTADWPLSRKFGCQTDMATNLLILAKELGLEPYGVSFHVGSQQRDIGAWDAAI 227

Query: 180 KNIEKEFG----HFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSE----KYSVQI 229
             ++  F         Q++ I++GGG       +   +  + + +  +          +I
Sbjct: 228 DKVKAIFDWLKTECDIQLKMINMGGGFPANYLTRTNDLPTYAKEITHYLHDDFGDDMPEI 287

Query: 230 YLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
            LEPG ++  N   L + V+ IS        + +          +       +       
Sbjct: 288 ILEPGRSLCANAGVLVSEVVLISRKTTTSLHRWVYTDVGMFSGLIETLGEAIKYPIYTDR 347

Query: 285 TGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338
           +G    +++ G SC + DI  E H       ++IGDR+ +     Y  +     FNG  
Sbjct: 348 SGEREESVIAGPSCDSADIMYEDHKYGLPNSLEIGDRLYWFSTGAYTTSYSAIEFNGFP 406


>gi|121551083|gb|ABM55741.1| ornithine decarboxylase [Epichloe festucae]
          Length = 445

 Score =  152 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 58/365 (15%), Positives = 103/365 (28%), Gaps = 37/365 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +        + +    VK   A+KC     +   L +   G   +S  E+  
Sbjct: 64  FYVADLGDVYR--QHLRWKKNLPRVKPFYAVKCNPDPQVLHLLAELGTGFDCASKGEIEQ 121

Query: 66  GH-EKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                   +   Y    K       +       + F+   +L K      +    + +  
Sbjct: 122 VLGMGTSPDRIIYAQPCKTNSYVRFVKSVGVKQMTFDNADELYKIAKLYPEAELFLRIMT 181

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           + + S  +  +       +  G            NV G+ FH        L F   +++ 
Sbjct: 182 DDTSSLCRLSMKFGAAMDTTEGLLA--VARDLGLNVVGVSFHVGSGASDPLAFYKAVRDA 239

Query: 183 EKEF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
              F         +  + +GGG    T +           + F +   V I  EPG   V
Sbjct: 240 HIVFQQGAELGHSLRTLDVGGGFCGDTFEQMAGVLREALDEFFPDGNKVDIIAEPGRYYV 299

Query: 239 TNTTTLNTTVLD---------------ISENIKNLVIVDSSVEAHVPDYL---------- 273
           +   T+   V+                +  N        S +  H               
Sbjct: 300 STAFTIACNVIARRTVEDPTLDGKGYMVYVNDGVYGNFSSIMFDHQQPVAKILRASGRTL 359

Query: 274 LYQESATIYPNTGPYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYNINRKN 332
               +A            V G +C   D   E   F+  + +GD + FED+  Y      
Sbjct: 360 YNSAAANPCSAGDGVEYSVWGPTCDGIDRISESVRFDSILDVGDWLYFEDMGAYTKCSAT 419

Query: 333 WFNGI 337
            FNG 
Sbjct: 420 QFNGF 424


>gi|325981612|ref|YP_004294014.1| Ornithine decarboxylase [Nitrosomonas sp. AL212]
 gi|325531131|gb|ADZ25852.1| Ornithine decarboxylase [Nitrosomonas sp. AL212]
          Length = 390

 Score =  152 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 50/359 (13%), Positives = 110/359 (30%), Gaps = 26/359 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+ ++D   +    D           +   A+K   A  +   L         +S YE
Sbjct: 28  ETPFLVVDLATIDRQYDEMSRHFPY--ARTYYAVKANPAPQILTLLKDKGACFDIASTYE 85

Query: 63  VMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +          +  ++                       ++ + L      A        
Sbjct: 86  LDKVLALGVTPDRISFGNTIKKAKDIRTFYQKGVRMFATDSEADLRNIAKAAPGARIYTR 145

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +    +++   + L+      S +             +  G+ FH   + +    + A L
Sbjct: 146 ILTEGTLTA-DWPLSRKFGCESDMAMDLLILARDLGLDPYGVSFHVGSQQREIGAWDAAL 204

Query: 180 KNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSVQI 229
             ++  F         +++ I++GGG                ++  + L E       +I
Sbjct: 205 GKVKVIFNRLWEEDRIKLKMINMGGGFPANYLQRTNELSIYAEEIARFLHEDFLDDMPEI 264

Query: 230 YLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
            +EPG ++++N   L + V+ IS        + +          +       +       
Sbjct: 265 IIEPGRSMISNAGVLVSEVVLISRKSRTALHRWIYTDVGKFTGLIETLDESIKYPIYTEK 324

Query: 285 TGPYT-AMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338
            G +  A++ G +C + DI  E +       +  GDR+ +     Y     +  FNG  
Sbjct: 325 NGEFENAIIAGPTCDSADIMYENYKYGLPLNLAAGDRLYWLSTGAYTTTYSSVEFNGFP 383


>gi|163738946|ref|ZP_02146359.1| Ornithine decarboxylase [Phaeobacter gallaeciensis BS107]
 gi|161387751|gb|EDQ12107.1| Ornithine decarboxylase [Phaeobacter gallaeciensis BS107]
          Length = 391

 Score =  152 bits (385), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 51/362 (14%), Positives = 112/362 (30%), Gaps = 24/362 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  +ID Q +                ++  A+K      +   L +      ++S  E+ 
Sbjct: 33  PTLVIDSQAVARQYAALAQGLGR--ARIHYAVKANPEPQILRRLTRMGANFDAASRAEIE 90

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +            +    K     A         F   +     K        ++ +R+ 
Sbjct: 91  MCLAAGAKPSQITFGNTIKRPADIAFAHEIGITHFAVDALAELDKLADHAPGARVCIRLL 150

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              + + + L+      + +     D+       V+GL FH   + +    ++  L  + 
Sbjct: 151 VEATGADWPLSRKFGCTAAMALTLMDRARDLDLCVSGLSFHVGSQTREPQMWADTLDQVA 210

Query: 184 KEFGH---FITQIEWISLGGGIHFTDKDY--PVKDFCQRLKEFSEKYSVQ---IYLEPGE 235
           + +        ++  +++GGG   +          + Q +             I  EPG 
Sbjct: 211 QVWRAAKTAGHELTLLNIGGGFPASYGTEVMAPNRYAQEVMALVNARFPDASEIMAEPGR 270

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPNTGP 287
            +V     +   VL +S    + +           S +   + + + Y+   T + +   
Sbjct: 271 GLVAEAGAIAAEVLLVSRKDADDLHRWVYLDIGKFSGLAETMDEAIRYR-ITTEHGDGQT 329

Query: 288 YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIA 343
              ++ G SC + D+  E   +     +K GDR+       Y     +  FNG     + 
Sbjct: 330 GPCILAGPSCDSADVLYEKQLYQMPLELKSGDRVVIHACGAYTTTYASVGFNGFPPLDVV 389

Query: 344 VK 345
           V 
Sbjct: 390 VI 391


>gi|163741810|ref|ZP_02149200.1| decarboxylase, pyridoxal-dependent [Phaeobacter gallaeciensis 2.10]
 gi|161384983|gb|EDQ09362.1| decarboxylase, pyridoxal-dependent [Phaeobacter gallaeciensis 2.10]
          Length = 393

 Score =  152 bits (384), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 51/362 (14%), Positives = 112/362 (30%), Gaps = 24/362 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  +ID Q +                ++  A+K      +   L +      ++S  E+ 
Sbjct: 35  PTLVIDSQAVARQYAALAQGLGR--ARIHYAVKANPEPQILRRLTRMGANFDAASRAEIE 92

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +            +    K     A         F   +     K        ++ +R+ 
Sbjct: 93  MCLAAGAKPSQITFGNTIKRPADIAFAHEIGITHFAVDALAELDKLADHAPGARVCIRLL 152

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              + + + L+      + +     D+       V+GL FH   + +    ++  L  + 
Sbjct: 153 VETTGADWPLSRKFGCTAAMALTLMDRARDLDLCVSGLSFHVGSQTREPQMWADTLDQVA 212

Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDY--PVKDFCQRLKEFSEKYSVQ---IYLEPGE 235
           + +        ++  +++GGG   +          + Q +             I  EPG 
Sbjct: 213 QVWRTAKTAGHELTLLNIGGGFPASYGTEVMAPNRYAQEVMALVNARFPDASEIMAEPGR 272

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPNTGP 287
            +V     +   VL +S    + +           S +   + + + Y+   T + +   
Sbjct: 273 GLVAEAGAIAAEVLLVSRKDADDLHRWVYLDIGKFSGLAETMDEAIRYR-ITTEHGDGQT 331

Query: 288 YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIA 343
              ++ G SC + D+  E   +     +K GDR+       Y     +  FNG     + 
Sbjct: 332 GPCILAGPSCDSADVLYEKQLYQMPLELKSGDRVVIHACGAYTTTYASVGFNGFPPLDVV 391

Query: 344 VK 345
           V 
Sbjct: 392 VI 393


>gi|74141603|dbj|BAE38566.1| unnamed protein product [Mus musculus]
          Length = 461

 Score =  152 bits (384), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 61/373 (16%), Positives = 113/373 (30%), Gaps = 33/373 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L       +++    V    A+KC  +  +  TL     G   +   E+ L
Sbjct: 40  FYVADLGDILK--KHLRWLKALPRVTPFYAVKCNDSRAIVSTLAAIGTGFDCAXQTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        ++    +    S++   K        K+ LRI  
Sbjct: 98  VQGLGVPAERVIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVARAHPKAKLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++ +    +V G+ FH          F   + +   
Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQAVSDARC 217

Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            F         +  + +GGG   ++      +           K F     V+I  EPG 
Sbjct: 218 VFDMATEVGFSMHLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPSDSGVRIIAEPGR 277

Query: 236 AIVTNTTTLNTTVLDIS-------------------ENIKNLVIVDSSVEAHVPDYLLYQ 276
             V +  TL   ++                              V  S    + D+   +
Sbjct: 278 YYVASAFTLAVNIIAKKTVWKEQPGSDDEDESNEQTFMYYVNDGVYGSFNCILYDHAHVK 337

Query: 277 E--SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                   P+   Y++ + G +C   D   E      + +GD + FE++  Y +   + F
Sbjct: 338 ALLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTF 397

Query: 335 NGINMPTIAVKNV 347
           NG   P I     
Sbjct: 398 NGFQRPNIYYVMS 410


>gi|330973820|gb|EGH73886.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 402

 Score =  152 bits (384), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 59/385 (15%), Positives = 122/385 (31%), Gaps = 35/385 (9%)

Query: 2   IKT-PY--YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
           ++T P   +  D   L  ++   +     AGV+L  A+K  +   M +TL   + G   S
Sbjct: 18  LETDPLAAFFYDLDALQQHVSEVMAALP-AGVELYYAIKANSEALMLETLAPLVSGFEIS 76

Query: 59  SLYEVMLGHEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
           S  E+         + + ++     D ++ + L N    I   +++++ + +  A++  +
Sbjct: 77  SGGEIERVMACPTRKPYVFSGPGKLDSDLRSALLNKVEAIHLESLNEIARLQQLAEQAGR 136

Query: 117 KIGLRINPSVS---------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
              + +  +                        + L E  +    +    + G   H   
Sbjct: 137 VQPVFLRINPQLPAAQSSRLAMAGTATPFGIDEADLAEAVRRVDNASHLTLKGFHVHAMS 196

Query: 168 ENKSFLCFSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRL 218
              S      +L    + +  +        Q+   ++GGGI       + +  +  C+ L
Sbjct: 197 HQMSVERHEQLLDFYLQRWQEWKALARDPSQLTHFNVGGGIGVDYLNSQQFDWQRLCRYL 256

Query: 219 KEFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLY 275
           ++   +      L  EPG  I          VLD   +     +V               
Sbjct: 257 EKRLGEQHDAPILRFEPGRFISAYCGYYAIEVLDSKTSHGEHFLVCRGGTHQFRLPVAQS 316

Query: 276 QESATIYPNTGP-------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
            +   I+  T P       +   + G+ C   D+       K V IGD +       Y  
Sbjct: 317 HDHPVIHLPTAPQSTDSSEHAYTIVGQLCTPKDVLSRRQPLKGVNIGDLLVLPLAGAYGY 376

Query: 329 NRKN-WFNGINMPTIAVKNVDGTIK 352
           N  +  F     P+         ++
Sbjct: 377 NISHADFLCHPRPSQHFVRNGERVR 401


>gi|323136936|ref|ZP_08072016.1| Orn/DAP/Arg decarboxylase 2 [Methylocystis sp. ATCC 49242]
 gi|322397697|gb|EFY00219.1| Orn/DAP/Arg decarboxylase 2 [Methylocystis sp. ATCC 49242]
          Length = 381

 Score =  152 bits (384), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 48/358 (13%), Positives = 102/358 (28%), Gaps = 28/358 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   +  N             ++  A+K   A  +   L        ++S+ E+ 
Sbjct: 21  PCLVVDLDVVRENYLGFAKAL--PDTRVFYAVKANPAPEVLSLLASLGSCFDTASVVEIE 78

Query: 65  LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                    +  ++      +     A          ++ +++ K    A        + 
Sbjct: 79  QTLAAGATPDRISFGNTIKKERDIARAYELGIRLFAVDSEAEVEKIARAAPGSKVFCRIL 138

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
            + + +           P    G    +       N  G+ FH   +  +   +   LK+
Sbjct: 139 CDGAGAEWPLSRKFGCVPEMATG--VLEHAHRLGLNAYGVSFHVGSQQTNPRMWDGALKS 196

Query: 182 IEKEFG---HFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSVQIYLE 232
               F         ++ ++LGGG                    + L +       +  +E
Sbjct: 197 AADIFRDLAERGITLQMVNLGGGFPTKYLKNVPAVKQYGNAIFRALSKHFGNRIPETIIE 256

Query: 233 PGEAIVTNTTTLNTTVLDISENI------KNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286
           PG  +V N   +   V+ IS+        + + +                      P  G
Sbjct: 257 PGRGMVGNAGIIEAEVVLISKKSEAEGELRWVYLDIGKFSGLAETIDEMIRYPIRTPADG 316

Query: 287 P--YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338
                 ++ G SC + D+  E   +     ++IG ++  E    Y        FNG  
Sbjct: 317 APTSPCVIAGPSCDSVDVLYEKHPYDLPISLEIGAKVLIEGTGAYTTTYSAVGFNGFP 374


>gi|299068847|emb|CBJ40088.1| putative diaminopimelate decarboxylase protein (lysA) [Ralstonia
           solanacearum CMR15]
          Length = 413

 Score =  152 bits (384), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 56/377 (14%), Positives = 103/377 (27%), Gaps = 42/377 (11%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            YL D   L              G +L  A+K  +   +   L+  + G   +SL EV+ 
Sbjct: 19  AYLYDLDHLRERAARL-SAMLPPGCELFYAIKANSDAPVLAALDGAVAGYEVASLGEVVR 77

Query: 66  GHEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
             E        +       D    A+    + I   +  QL +    A ++ ++  + + 
Sbjct: 78  AREVGAHARIVFGGPGKTDDELQGALERGVELIHVESELQLRRLDAIACRMGRRARVLLR 137

Query: 124 PSVS---------------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE 168
            + +                              + +  +         V GL  H    
Sbjct: 138 VNPNPLAADAGGKRPQGTLTMGGQPTQFGIEEDAVPDLIRLARTLPGVEVVGLHLHALSN 197

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKE 220
           N             L    +        ++ +++GGGI     +    +  + FC  L  
Sbjct: 198 NLDADSHLALMRHYLALALRLRREHGLTLDTLNVGGGIGVDYANPSHAFDWRRFCDGLGV 257

Query: 221 FSEK--YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQE 277
              +     +I  E G  I  +     T V+D+  N      V      H          
Sbjct: 258 LLAEAGAGCRIVFECGRFIAADCGYYVTEVVDLKRNHGQWFAVLRGGTHHFRLPASWQHN 317

Query: 278 SATIYPNTGPYTA------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
                     +               +CG  C   D+         +++GDRI F+    
Sbjct: 318 HPFAILPNARWDYSFERPSVQAQAVTLCGELCTPKDVLARDVVVDRLRVGDRIVFQLAGA 377

Query: 326 YNINRKNW-FNGINMPT 341
           Y  +  +  F     P 
Sbjct: 378 YGWHISHHDFLSHPHPE 394


>gi|239834475|ref|ZP_04682803.1| Lysine/ornithine decarboxylase [Ochrobactrum intermedium LMG 3301]
 gi|239822538|gb|EEQ94107.1| Lysine/ornithine decarboxylase [Ochrobactrum intermedium LMG 3301]
          Length = 377

 Score =  152 bits (384), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 52/355 (14%), Positives = 110/355 (30%), Gaps = 25/355 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   + +N  +       +  ++  A+K   A  +   L        ++S+ E+ 
Sbjct: 18  PCLVVDTDVVRDNYLSFEKALPYS--RIFYAVKANPAPEILRLLASLGSCFDTASVAEIE 75

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +  E        +Y    K     A        ++         K        ++  R+ 
Sbjct: 76  MALEAGATANRISYGNTIKKERDIARAFELGIRLYAVDCVEEVEKVARAAPGSRVFCRVL 135

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
                +++ L+        +        +S   +  G+ FH   +      +   L +  
Sbjct: 136 TDGEGAEWPLSRKFGCVPAMAIDVLRHAKSLGLDSYGVSFHVGSQQTDLTAWDRALGDAA 195

Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPG 234
           K F         +  +++GGG                      L +       +  +EPG
Sbjct: 196 KVFRTLADEGIVLRMVNMGGGFPTRYLKDVPTAQAYGMVIFDALSKHFGNRIPETIIEPG 255

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPNTG 286
             +V N   + T V+ +S    N  +    ++          + + + YQ   T +  + 
Sbjct: 256 RGMVGNAGVIKTEVVLVSRKADNDNVRWVYLDIGKFGGLAETMDEAIRYQ-IVTPHDGSE 314

Query: 287 PYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337
               ++ G +C + D+  E   +     + IGD I  E    Y        FNG 
Sbjct: 315 TEPCVLAGPTCDSADVLYEKTPYPLPVSLTIGDEILIEGTGAYTTTYSAVAFNGF 369


>gi|194335990|ref|YP_002017784.1| Orn/DAP/Arg decarboxylase 2 [Pelodictyon phaeoclathratiforme BU-1]
 gi|194308467|gb|ACF43167.1| Orn/DAP/Arg decarboxylase 2 [Pelodictyon phaeoclathratiforme BU-1]
          Length = 379

 Score =  152 bits (384), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 59/372 (15%), Positives = 112/372 (30%), Gaps = 33/372 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP +++D + L  N            V+   A+K  +A  +  T          +S+ E
Sbjct: 14  GTPLFVVDHEVLRANYREFKRHLPR--VQAYFAVKANSAKEIVKTFYDAGASFDVASMPE 71

Query: 63  VMLGHEKFGG------------ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK 110
            +  +E                +    N       +  +      + F+   ++ K    
Sbjct: 72  FLAVYENIKSLTPEEQQDFIWDKIIYANPIKPIPTLKELDQYKPLVTFDNEDEIAKIATY 131

Query: 111 AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170
           A   +  + LRI    + +   L+              +K       V GL FH   +  
Sbjct: 132 A--PNTGLVLRIKVPNTGAMVELSSKFGADPGEAVDLIEKAFRSGLVVEGLSFHVGSQCT 189

Query: 171 SFLCFSAMLKNIEKEFGHFIT----QIEWISLGGGIHFTDKDY--PVKDFCQRLKEFSEK 224
           +F  +   L      F         Q++ + +GGG          P  +    L    ++
Sbjct: 190 NFQNYIQALNLAANIFKESWERGYTQVKILDIGGGFPAPYDKNVRPFAELAIMLNSEIDR 249

Query: 225 YSVQ---IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-----VPDYLLYQ 276
                  I  EPG  +V     +   ++  +          +    H     + D+  Y 
Sbjct: 250 LFPPDIEIIAEPGRFLVATAAWVVMEIIGTAYRDGKRCYYVNDGVYHTFSGIIFDHCEYP 309

Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFN 335
             +    N       V G +C A D     +     + IGD +  E++  Y+     +FN
Sbjct: 310 VKSFKEGNEK--MCAVYGPTCDALDTITMANLLPEDLSIGDLLYSENIGAYSHASSTYFN 367

Query: 336 GINMPTIAVKNV 347
           G     +   N 
Sbjct: 368 GFPPAKVLHINR 379


>gi|91780468|ref|YP_555675.1| putative Orn/DAP/Arg decarboxylase [Burkholderia xenovorans LB400]
 gi|91693128|gb|ABE36325.1| Putative Orn/DAP/Arg decarboxylase [Burkholderia xenovorans LB400]
          Length = 402

 Score =  152 bits (384), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 47/375 (12%), Positives = 96/375 (25%), Gaps = 34/375 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP++  D+  +   +     +   AG+ L  ++K      +   L Q +DG   +S  E+
Sbjct: 29  TPFFAYDRSAIDIRVRELRNLLP-AGMHLHYSIKANPMPAVIHHLAQRVDGFDVASAQEM 87

Query: 64  MLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLR 121
            L        +   +    K  +           +   + +QL        +L  +  + 
Sbjct: 88  ALALDAGTAPDAIGFAGPGKSHDDLRRAVASGINVHVESETQLRLVTALGWELGVQPSVA 147

Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKS--- 171
           I  +                +  G            +E+    + G       +      
Sbjct: 148 IRVNPDFQVGHSGMRMGGGAAPFGVDVDQVPALLRELEAREVALAGFHVFWGSQCLHAAT 207

Query: 172 -FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ-- 228
                      I +        + +++LGGG              + + E  + +     
Sbjct: 208 IIKAQRQSADLILRLASGVPRPLRFVNLGGGFGIPYFPGETPLDVKAVCEAMQDWLPPLC 267

Query: 229 -------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-----LLYQ 276
                    LE G  +V         V+D   +     +V      H          + +
Sbjct: 268 ERLPGTTPILELGRYLVGEAGIYVCRVIDRKVSRGRTFVVTDGGLHHHLAASGNFGQVLR 327

Query: 277 ESATIYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
            +  +     P         V G  C   D   +        IGD +       Y  +  
Sbjct: 328 RNFPVVIGNRPDGVPRERCHVVGCLCTPLDRLADEVELPEAHIGDFVVIMQSGAYGRSAS 387

Query: 332 N-WFNGINMPTIAVK 345
              F     P   + 
Sbjct: 388 PVRFLSHPEPVEMLV 402


>gi|218671272|ref|ZP_03520942.1| diaminopimelate decarboxylase protein [Rhizobium etli GR56]
          Length = 309

 Score =  152 bits (384), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 42/270 (15%), Positives = 77/270 (28%), Gaps = 20/270 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+     L  +         +    +  A+K  +   +  TL +   G    S  
Sbjct: 25  VGTPFYVYSTATLERHYRVFSEAFADMDSMVCYAMKANSNQAVLKTLGRLGAGIDVVSEG 84

Query: 62  EVMLGHEK-FGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E+              ++           A+ +        +  +L     +A       
Sbjct: 85  ELRRALAADIPASRIMFSGVGKTPSEMDFALEAGIYCFNVESEPELEILNQRAVSAGKKA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
            +  RINP V           +  ++ G   +                V G+  H   + 
Sbjct: 145 PVSFRINPDVDAKTHSKISTGKKENKFGISWERARAIYAHAAKLPGIEVTGIDMHIGSQI 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221
                F    K +             I+ + +GGG+    KD          +   +K  
Sbjct: 205 TELQPFDDAFKLLRDLVATLRADGHTIDHVDIGGGLGVPYKDDNNPPPLPDAYAAIVKNQ 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251
                 ++  EPG  IV N   L T VL +
Sbjct: 265 LRDLDCKVITEPGRLIVGNAGILVTEVLYV 294


>gi|152149342|pdb|2PLJ|A Chain A, Crystal Structure Of LysineORNITHINE DECARBOXYLASE
           Complexed With Putrescine From Vibrio Vulnificus
 gi|152149343|pdb|2PLJ|B Chain B, Crystal Structure Of LysineORNITHINE DECARBOXYLASE
           Complexed With Putrescine From Vibrio Vulnificus
 gi|152149344|pdb|2PLK|A Chain A, Crystal Structure Of LysineORNITHINE DECARBOXYLASE
           Complexed With Cadaverine From Vibrio Vulnificus
 gi|152149345|pdb|2PLK|B Chain B, Crystal Structure Of LysineORNITHINE DECARBOXYLASE
           Complexed With Cadaverine From Vibrio Vulnificus
          Length = 419

 Score =  152 bits (384), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 58/357 (16%), Positives = 105/357 (29%), Gaps = 17/357 (4%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  L+D   +               V L  ALK      +  TL         ++  EV 
Sbjct: 56  PLLLLDCDVIRQQYRALKNAL--PNVTLHYALKPLPHPVVVRTLLAEGASFDLATTGEVE 113

Query: 65  L-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           L   E    +   +    K              +F   +     K KA +   ++ +R++
Sbjct: 114 LVASEGVPADLTIHTHPIKRDADIRDALAYGCNVFVVDNLNELEKFKAYRDDVELLVRLS 173

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE----NKSFLCFSAML 179
              S +   L+              +  +     + GL FH   +    NK         
Sbjct: 174 FRNSEAFADLSKKFGCSPEQALVIIETAKEWNIRIKGLSFHVGSQTTNPNKYVEAIHTCR 233

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYSVQIYL--EPGE 235
             +E+     +  +  + +GGG       +  P+  FC  + E        +++  EPG 
Sbjct: 234 HVMEQVVERGLPALSTLDIGGGFPVNYTQQVMPIDQFCAPINEALSLLPETVHVLAEPGR 293

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGPYTA 290
            I     T   +V+  +E    +          S    + D   Y    TI        +
Sbjct: 294 FICAPAVTSVASVMGQAEREGQIWYYLDDGIYGSFSGLMFDDARYPL-TTIKQGGELIPS 352

Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
           ++ G +C + D+  E      +  GD +    +  Y       FN          N 
Sbjct: 353 VLSGPTCDSVDVIAENILLPKLNNGDLVIGRTMGAYTSATATDFNFFKRAQTIALNE 409


>gi|27367421|ref|NP_762948.1| Ornithine decarboxylase [Vibrio vulnificus CMCP6]
 gi|27358990|gb|AAO07938.1| Ornithine decarboxylase [Vibrio vulnificus CMCP6]
          Length = 399

 Score =  152 bits (384), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 58/357 (16%), Positives = 105/357 (29%), Gaps = 17/357 (4%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  L+D   +               V L  ALK      +  TL         ++  EV 
Sbjct: 36  PLLLLDCDVIRQQYRALKNAL--PNVTLHYALKPLPHPVVVRTLLAEGASFDLATTGEVE 93

Query: 65  L-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           L   E    +   +    K              +F   +     K KA +   ++ +R++
Sbjct: 94  LVASEGVPADLTIHTHPIKRDADIRDALAYGCNVFVVDNLNELEKFKAYRDDVELLVRLS 153

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE----NKSFLCFSAML 179
              S +   L+              +  +     + GL FH   +    NK         
Sbjct: 154 FRNSEAFADLSKKFGCSPEQALVIIETAKEWNIRIKGLSFHVGSQTTNPNKYVEAIHTCR 213

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYSVQIYL--EPGE 235
             +E+     +  +  + +GGG       +  P+  FC  + E        +++  EPG 
Sbjct: 214 HVMEQVVERGLPALSTLDIGGGFPVNYTQQVMPIDQFCAPINEALSLLPETVHVLAEPGR 273

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGPYTA 290
            I     T   +V+  +E    +          S    + D   Y    TI        +
Sbjct: 274 FICAPAVTSVASVMGQAEREGQIWYYLDDGIYGSFSGLMFDDARYPL-TTIKQGGELIPS 332

Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
           ++ G +C + D+  E      +  GD +    +  Y       FN          N 
Sbjct: 333 VLSGPTCDSVDVIAENILLPKLNNGDLVIGRTMGAYTSATATDFNFFKRAQTIALNE 389


>gi|119499648|ref|XP_001266581.1| ornithine decarboxylase [Neosartorya fischeri NRRL 181]
 gi|119414746|gb|EAW24684.1| ornithine decarboxylase [Neosartorya fischeri NRRL 181]
          Length = 443

 Score =  152 bits (384), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 50/363 (13%), Positives = 106/363 (29%), Gaps = 37/363 (10%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+++ D  ++L              V    A+KC     +   L +   G   +S  E+ 
Sbjct: 49  PFFVADLGQILRQHRRWQSNL--PNVHPFYAVKCNPDPTLLRLLAELGTGFDCASTEELR 106

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +            +    K        +     +    +       +      ++ LRI 
Sbjct: 107 VVLNLGVDPSRIIFANPCKSASSLLFAARTGVTLTTFDNLDELETIQTFLPTARLMLRIY 166

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
                +   L +      +       + +     V G+ FH      +   +   +++  
Sbjct: 167 ACDDDALIKLGEKFGAPIKSSFVLLQRAQELGLEVCGVSFHVGTGASNVSAYVNAIRHAH 226

Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK---YSVQIYLEPGEAI 237
             F         ++ + +GGG     +D   +   Q ++    +      QI  EPG   
Sbjct: 227 MVFELGKSLGYDMDLLDIGGG----YQDSNFEKIAQSIRGTLMEAFPSRTQIIAEPGRYY 282

Query: 238 VTNTTTLNTTVLDISENIKNLVIVDSSV----------------------EAHVPDYLLY 275
             +  TL   +L    +I         +                       + +P    Y
Sbjct: 283 ARSAYTLVCKILSRRCHIAEAAQDRPDMLYQNDGVYGSFMNVLFEKEVVHPSLIPCSSPY 342

Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWF 334
               T     GP+   + G +C + D        +  V++GD + + ++  Y +     F
Sbjct: 343 HLRNTKRVR-GPHHYSIWGPTCDSVDCVARESTLEAEVRVGDWLKYSNMGAYTMATSTQF 401

Query: 335 NGI 337
           NG 
Sbjct: 402 NGF 404


>gi|229588356|ref|YP_002870475.1| putative ornithine decarboxylase [Pseudomonas fluorescens SBW25]
 gi|229360222|emb|CAY47079.1| putative ornithine decarboxylase [Pseudomonas fluorescens SBW25]
          Length = 387

 Score =  152 bits (384), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 53/359 (14%), Positives = 114/359 (31%), Gaps = 26/359 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+ +ID   +    D      +    K+  A+K   A  + D L         +S+YE
Sbjct: 25  ETPFVVIDTAMISQAYDDLRAGFEF--AKVYYAVKANPAVEIIDLLKDKGSSFDIASIYE 82

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +    +     +  +Y    K  +           +F +       ++ A+         
Sbjct: 83  LDKVMDRGVSPDRISYGNTIKKSKDIRYFYEKGVRLF-STDSEADLRNIAKAAPGSKVYV 141

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179
              +   +        +   +        I +    +   G+ FH   + +    + A +
Sbjct: 142 RILTEGSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDAAI 201

Query: 180 KNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSVQI 229
             ++  F          ++ I++GGG                ++  + LKE       +I
Sbjct: 202 AKVKVIFERLKEEDNIHLKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDDLPEI 261

Query: 230 YLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
            LEPG +++ N   L + V+ ++        + +          +       +       
Sbjct: 262 ILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIETMDEAIKFPIWTEK 321

Query: 285 TGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338
            G     ++ G +C + DI  E +       + IGDR+ +     Y  +     FNG  
Sbjct: 322 KGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLYWLSTGAYTTSYSAVEFNGFP 380


>gi|257482121|ref|ZP_05636162.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2
           [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|330987528|gb|EGH85631.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2
           [Pseudomonas syringae pv. lachrymans str. M301315]
          Length = 387

 Score =  152 bits (384), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 54/361 (14%), Positives = 114/361 (31%), Gaps = 30/361 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+ +ID   +    D      +    K+  A+K   A  + + L         +S+YE
Sbjct: 25  ETPFVVIDTAIISKAYDDLRAGFEF--AKVYYAVKANPAVEVINLLKDKGSSFDIASIYE 82

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +        G E  +Y    K  +               ++ + L      A      + 
Sbjct: 83  LDKVMSCGVGPERISYGNTIKKSKDIRYFYEKGVRLFATDSEADLRNIAKAAPGAKVYVR 142

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177
           +        +        +   +        I +    +   G+ FH   + +    + A
Sbjct: 143 ILTE---GSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDA 199

Query: 178 MLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSV 227
            +  ++  F          ++ I++GGG                ++  + LKE       
Sbjct: 200 AIAKVKVIFERLKEEDGIVLKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDDLP 259

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIY 282
           +I LEPG ++++N   L + V+ ++        + +          +       +     
Sbjct: 260 EIILEPGRSLISNAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIETMDEAIKFPIWT 319

Query: 283 PNTGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337
              G     ++ G +C + DI  E +       + IGDR+ +     Y  +     FNG 
Sbjct: 320 EKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRMYWLSTGAYTTSYSAVEFNGF 379

Query: 338 N 338
            
Sbjct: 380 P 380


>gi|300693403|ref|YP_003749376.1| diaminopimelate decarboxylase protein (lysa) [Ralstonia
           solanacearum PSI07]
 gi|299075440|emb|CBJ34735.1| putative diaminopimelate decarboxylase protein (lysA) [Ralstonia
           solanacearum PSI07]
          Length = 413

 Score =  152 bits (384), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 57/377 (15%), Positives = 102/377 (27%), Gaps = 42/377 (11%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            YL D   L             AG +L  A+K  +   +   L+  + G   +SL EV+ 
Sbjct: 19  AYLYDLDHLRERARRL-SAMLPAGCELFYAIKANSDAPVLAALDGAVAGYEVASLGEVVR 77

Query: 66  GHEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
             E  G     +       D    A+    + I   +  QL +    A+++ ++  + + 
Sbjct: 78  AREVGGHARIVFGGPGKTDDELQGALERGVELIHAESELQLRRLDAIARRMGRRARVLLR 137

Query: 124 PSVS---------------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE 168
            + +                              +    +         V GL  H    
Sbjct: 138 VNPNPLSADAAGRRPEGTLTMGGQPTQFGIEEDAVPGLIRLARTLPGVEVVGLHLHALSN 197

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE- 223
           N             L    +        ++ +++GGGI             +R  +    
Sbjct: 198 NLDADSHLALMRHYLSLALRLHREHGLTLDTLNVGGGIGVDYAQPSHAFDWRRFCDGLGV 257

Query: 224 -----KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQE 277
                +   +I  E G  I  +     T V+DI  N      V      H          
Sbjct: 258 LLAEARAGCRIVFECGRFIAADCGYYVTEVVDIKRNHGKWFAVLRGGTHHFRLPASWQHN 317

Query: 278 SATIYPNTGPYTAM------------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
                     ++              +CG  C   D+         + +GDRI F+    
Sbjct: 318 HPFAVLPNAQWSYPFARPSVQAQAITLCGELCTPKDVLARDVVVDRLSVGDRIVFQLAGA 377

Query: 326 YNINRKNW-FNGINMPT 341
           Y  +  +  F     P 
Sbjct: 378 YGWHISHHDFLSHPHPE 394


>gi|164688768|ref|ZP_02212796.1| hypothetical protein CLOBAR_02415 [Clostridium bartlettii DSM
           16795]
 gi|164602244|gb|EDQ95709.1| hypothetical protein CLOBAR_02415 [Clostridium bartlettii DSM
           16795]
          Length = 409

 Score =  152 bits (384), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 56/393 (14%), Positives = 122/393 (31%), Gaps = 46/393 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV- 63
           P+Y+ D++ + + +            + L ++K      +   ++Q   G+ S+S  EV 
Sbjct: 16  PFYIYDEKVIGDQIQELKTNFPE--FEFLYSIKTNPNKDVIKFISQNDIGSDSASKNEVF 73

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                    E   Y+ A K  +      +   I  ++  +L    + A++ +  + + + 
Sbjct: 74  KSIDAGMPKEKIIYSSAGKTKQDIEETYDKCIITADSYHELEVINEVAKEHNIVLRVGVR 133

Query: 124 PSVS---YSKFILADPNRPFSRLGEKCKDKIESEIK-NVNGLMFHNNCENKSFLCFSAML 179
            + +       IL +            K+ I+S     + G+  H   +  ++       
Sbjct: 134 INSNYAIEGGDILPNKFGIDEESLLPHKEFIDSLKNIKICGIHVHLKSQILNYETLYNYY 193

Query: 180 ----KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC--------QRLKEFSEKYSV 227
               +            +++++ GGG+         +           + +KEF EK + 
Sbjct: 194 KDVLELAVFCVDEMGFDMDFVNFGGGLGVAYSQRENELEIESLGQKCRELIKEFKEKLNC 253

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLV------IVDSSVEAHVPDYLLYQESATI 281
           ++ +E G  IV  + T  T ++D   +                          Y +    
Sbjct: 254 RLIIESGRFIVCKSGTYVTYIIDKKVSRGANYLIVANGYNGFHKTTLAEMVKGYAQGPLE 313

Query: 282 YPN--------------------TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321
             +                           VCG  C A D+ G+       +IGD I+  
Sbjct: 314 DIHAVEPLFTSYDAYEVKVLNKSQEKEEVTVCGNLCTAADLIGKNLVLPKAEIGDIIAIT 373

Query: 322 DVAGYNINRKN-WFNGINMPTIAVKNVDGTIKA 353
           +   Y        F+  ++P     N       
Sbjct: 374 NAGSYGFTLSPILFSSHDIPYEIYLNSKNQAII 406


>gi|312958927|ref|ZP_07773446.1| ornithine decarboxylase [Pseudomonas fluorescens WH6]
 gi|311286697|gb|EFQ65259.1| ornithine decarboxylase [Pseudomonas fluorescens WH6]
          Length = 387

 Score =  152 bits (384), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 53/361 (14%), Positives = 112/361 (31%), Gaps = 30/361 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+ +ID   +    D      +    K+  A+K   A  + D L         +S+YE
Sbjct: 25  ETPFVVIDTAMISQAYDDLRAGFEF--AKVYYAVKANPAVEIIDLLKDKGSSFDIASIYE 82

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +    +     +  +Y    K  +               ++ + L      A        
Sbjct: 83  LDKVMDRGVSADRISYGNTIKKSKDIRYFYEKGVRLFSTDSEADLRNIAKAAPGSKVYGR 142

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177
           +        +        +   +        I +    +   G+ FH   + +    + A
Sbjct: 143 ILTE---GSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDA 199

Query: 178 MLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSV 227
            +  ++  F          ++ I++GGG                ++  + LKE       
Sbjct: 200 AIAKVKVIFERLKEEDGIHLKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDDLP 259

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIY 282
           +I LEPG +++ N   L + V+ ++        + +          +       +     
Sbjct: 260 EIILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIETMDEAIKFPIWT 319

Query: 283 PNTGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337
              G     ++ G +C + DI  E +       + IGDR+ +     Y  +     FNG 
Sbjct: 320 EKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLYWLSTGAYTTSYSAVEFNGF 379

Query: 338 N 338
            
Sbjct: 380 P 380


>gi|296394573|ref|YP_003659457.1| Orn/DAP/Arg decarboxylase 2 [Segniliparus rotundus DSM 44985]
 gi|296181720|gb|ADG98626.1| Orn/DAP/Arg decarboxylase 2 [Segniliparus rotundus DSM 44985]
          Length = 421

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 50/366 (13%), Positives = 108/366 (29%), Gaps = 35/366 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP  ++D + +                ++  A+K   A  +   L         +S+ E
Sbjct: 52  ETPCLVVDLETVRERYCQLTAAL--PKARVYYAVKANPAAEVVRELAAAGSCFDVASVAE 109

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + L            Y            A          ++ + L    + A        
Sbjct: 110 IELCLAAGANPRDLCYGNTIKKPADVAKAHALGVRLYTTDSETDLEALSEHAPGSSVFCR 169

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +      +   F       P   L E    +  +      G+ FH+  +      + + +
Sbjct: 170 IAAVHDGAVYSFGAKFGCAPE--LAESLLLRAGTLGLAAAGVSFHSGSQQLDPHAWRSGI 227

Query: 180 KN---IEKEFGHFITQIEWISLGGGIHFTDKD--YPVKDFCQRLKEFSEKYS-------V 227
            +   I         ++  +++GGG+  +      P+ D+   +     ++         
Sbjct: 228 AHAAQIAARLAAKGVRLPMLNIGGGLPGSYTHAAPPLADYADAISAAVREHFGAVGLHEP 287

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPD------------YLLY 275
            + LEPG  +V +   L + V+ +S            V+A   +             L  
Sbjct: 288 LLVLEPGRYLVADAGLLRSEVVLVSRKSPADEHRWVYVDAGRYNGLTETEGECVAYVLAS 347

Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN 332
            E A            + G +C   D+  +   +     +++GD + F     Y  +  +
Sbjct: 348 PEHAGPAAAEDTAPVYLAGPTCDGDDVLYQRTVYRLPSALRVGDHLDFLSTGAYTASYAS 407

Query: 333 -WFNGI 337
             FNG 
Sbjct: 408 IAFNGF 413


>gi|66047474|ref|YP_237315.1| ornithine decarboxylase [Pseudomonas syringae pv. syringae B728a]
 gi|302188823|ref|ZP_07265496.1| ornithine decarboxylase [Pseudomonas syringae pv. syringae 642]
 gi|63258181|gb|AAY39277.1| Ornithine decarboxylase [Pseudomonas syringae pv. syringae B728a]
 gi|330952898|gb|EGH53158.1| ornithine decarboxylase [Pseudomonas syringae Cit 7]
 gi|330969561|gb|EGH69627.1| ornithine decarboxylase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 387

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 54/361 (14%), Positives = 115/361 (31%), Gaps = 30/361 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+ +ID   +    D      +    K+  A+K   A  + + L +       +S+YE
Sbjct: 25  ETPFVVIDTDIISKAYDDLRAGFEF--AKVYYAVKANPAVEVINLLKEKGSSFDIASIYE 82

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +        G E  +Y    K  +               ++ + L      A      + 
Sbjct: 83  LDKVLSCGVGPERMSYGNTIKKSKDIRYFYEKGVRLFATDSEADLRNIAKAAPGAKVYVR 142

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177
           +        +        +   +        I +    +   G+ FH   + +    + A
Sbjct: 143 ILTE---GSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDA 199

Query: 178 MLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSV 227
            +  ++  F          ++ I++GGG                ++  + LKE       
Sbjct: 200 AIAKVKVIFERLKEEDGIVLKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDDLP 259

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIY 282
           +I LEPG ++++N   L + V+ ++        + +          +       +     
Sbjct: 260 EIILEPGRSLISNAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIETMDEAIKFPIWT 319

Query: 283 PNTGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337
              G     ++ G +C + DI  E +       + IGDR+ +     Y  +     FNG 
Sbjct: 320 EKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRMYWLSTGAYTTSYSAVEFNGF 379

Query: 338 N 338
            
Sbjct: 380 P 380


>gi|269792190|ref|YP_003317094.1| Orn/DAP/Arg decarboxylase 2 [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269099825|gb|ACZ18812.1| Orn/DAP/Arg decarboxylase 2 [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 392

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 60/365 (16%), Positives = 119/365 (32%), Gaps = 22/365 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP  ++D  K++            A      A+K      +   L++       +S+YE
Sbjct: 30  ETPCLVMDMSKVIERYQEIDREMGFAKC--YYAVKANPHDEIIRELSKRGSCFDVASIYE 87

Query: 63  V-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +  L       E  +Y    K     A   +    +F T  + +  K        K+  R
Sbjct: 88  LDQLLRLGVEPERISYGNTIKKARDVAYAYSKGVRVFATDCESDLRKIAENAPGSKVFYR 147

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           I    S + + L+           +             GL FH   + +    +  ++  
Sbjct: 148 ILSDCSGADWPLSRKFGTHPDSIYRLIGLSTRLPVEPYGLSFHVGSQQRDIGQWGFLIST 207

Query: 182 IEKEF---GHFITQIEWISLGGGIHFTD--KDYPVKDFCQRL----KEFSEKYSVQIYLE 232
            +  F     F   ++ I+LGGG+         P+  +   +    KE   +   +I++E
Sbjct: 208 CKYLFDSAREFNVDLKMINLGGGLPAQYLEPTAPLSLYASEILRFLKEDFGEKLPEIWIE 267

Query: 233 PGEAIVTNTTTLNTTVLDI-----SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287
           PG  +V +   L + V+ I     +     + +        +       +        GP
Sbjct: 268 PGRGMVGDAGVLVSEVVMISKKSQTNPYSWVYLDAGKFGGLIETLDEAIKYPIYVDRRGP 327

Query: 288 -YTAMVCGRSCLAGDIFG---EFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTI 342
               ++ G +C + DI     ++     +  GDR+ F     Y  +  +  FNG      
Sbjct: 328 SQKTILAGPTCDSVDILYEHFKYELPVSLSEGDRVYFLSAGAYTASYCSVNFNGFPPIKT 387

Query: 343 AVKNV 347
            +   
Sbjct: 388 YIFEG 392


>gi|71734289|ref|YP_276391.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2
           [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|289625475|ref|ZP_06458429.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2
           [Pseudomonas syringae pv. aesculi str. NCPPB3681]
 gi|289648183|ref|ZP_06479526.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2
           [Pseudomonas syringae pv. aesculi str. 2250]
 gi|298488376|ref|ZP_07006407.1| Ornithine decarboxylase / Arginine decarboxylase [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|71554842|gb|AAZ34053.1| decarboxylase, ornithine/DAP/arginine decarboxylase family 2
           [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|298157001|gb|EFH98090.1| Ornithine decarboxylase / Arginine decarboxylase [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|320322601|gb|EFW78694.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2
           [Pseudomonas syringae pv. glycinea str. B076]
 gi|320330144|gb|EFW86130.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2
           [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330869021|gb|EGH03730.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2
           [Pseudomonas syringae pv. aesculi str. 0893_23]
 gi|330882340|gb|EGH16489.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2
           [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330888738|gb|EGH21399.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2
           [Pseudomonas syringae pv. mori str. 301020]
          Length = 387

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 54/361 (14%), Positives = 114/361 (31%), Gaps = 30/361 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+ +ID   +    D      +    K+  A+K   A  + + L         +S+YE
Sbjct: 25  ETPFVVIDTAIISKAYDDLRAGFEF--AKVYYAVKANPAVEVINLLKDKGSSFDIASIYE 82

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +        G E  +Y    K  +               ++ + L      A      + 
Sbjct: 83  LDKVMSCGVGPERISYGNTIKKSKDIRYFYEKGVRLFATDSEADLRNIAKAAPGAKVYVR 142

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177
           +        +        +   +        I +    +   G+ FH   + +    + A
Sbjct: 143 ILTE---GSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDA 199

Query: 178 MLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSV 227
            +  ++  F          ++ I++GGG                ++  + LKE       
Sbjct: 200 AIAKVKVIFERLKEEDGIVLKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDDLP 259

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIY 282
           +I LEPG ++++N   L + V+ ++        + +          +       +     
Sbjct: 260 EIILEPGRSLISNAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIETMDEAIKFPIWT 319

Query: 283 PNTGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337
              G     ++ G +C + DI  E +       + IGDR+ +     Y  +     FNG 
Sbjct: 320 EKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRMYWLSTGAYTTSYSAVEFNGF 379

Query: 338 N 338
            
Sbjct: 380 P 380


>gi|302910029|ref|XP_003050202.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256731139|gb|EEU44489.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 448

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 58/363 (15%), Positives = 100/363 (27%), Gaps = 33/363 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++        + +    V+   A+KC     +   L +   G   +S  E+  
Sbjct: 67  FFVADLGEVYR--QHLRWKKNLPRVRPFYAVKCNPDTQIIKLLAELGTGFDCASKAEIEQ 124

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   +   Y    K       +           +    +K        ++ LRI  
Sbjct: 125 VLSLGLSPDRIIYAQPCKTNSYVRYVKTAGVKQMTFDNSDELYKIAKLYPGAELFLRIMT 184

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S S    +          E      +    NV G+ FH        L F   +++   
Sbjct: 185 DDSESMCRFSMKFGAAMETAEGLLALAKQLGLNVVGVSFHVGSGASDPLAFYKAVRDAHT 244

Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            F         +  + +GGG    T +           + F     V I  EPG   V  
Sbjct: 245 VFQQARELGFNMRTLDVGGGFSGDTFETMAEVLREALDEFFPPGCGVDIMAEPGRYYVAT 304

Query: 241 TTTLNTTVLD---------------ISENIKNLVIVDSSVEAHVPDYL----------LY 275
             T+   ++                +  N        + V  H                 
Sbjct: 305 AFTIACNIIARRTVEDPTLDGKGYMVYVNDGVYGNFSNIVFDHQTPVAKILRASGKTLYE 364

Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFEDVAGYNINRKNWF 334
             SA   P        + G +C   D   E   F+  + +GD + FED+  Y       F
Sbjct: 365 TPSAHPVPAGEGVEYSIWGPTCDGIDRVTESIRFDPILDVGDWLYFEDMGAYTKCSATQF 424

Query: 335 NGI 337
           NG 
Sbjct: 425 NGF 427


>gi|70734359|ref|YP_257999.1| pyridoxal-dependent decarboxylase domain-containing protein
           [Pseudomonas fluorescens Pf-5]
 gi|68348658|gb|AAY96264.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain
           [Pseudomonas fluorescens Pf-5]
          Length = 387

 Score =  152 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 55/359 (15%), Positives = 120/359 (33%), Gaps = 26/359 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+ +ID Q +    D      +    K+  A+K   A  + D L++       +S+YE
Sbjct: 25  ETPFVVIDTQMISQAYDDLRAGFEF--AKVYYAVKANPAVEIIDLLHEKGSSFDIASIYE 82

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +             +Y    K  +      +    ++ T S+ +  ++ A+         
Sbjct: 83  LDKVLGRGVNPANISYGNTIKKSKDIRYFYDKGVRLYATDSEAD-LRNIAKAAPGSKVYV 141

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179
              +   +        +   +        I +    +   G+ FH   + +    + A +
Sbjct: 142 RILTEGSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGVSFHVGSQQRDISVWDAAI 201

Query: 180 KNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSVQI 229
             ++  F         +++ I++GGG                ++  + LKE       +I
Sbjct: 202 AKVKVIFERLKEEDGIELKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDDLPEI 261

Query: 230 YLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
            LEPG +++ N   L + V+ ++        + +          +       +       
Sbjct: 262 ILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIETMDESIKFPIWTEK 321

Query: 285 TGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338
            G     ++ G +C + DI  E +       + IGDR+ +     Y  +     FNG  
Sbjct: 322 KGEVEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLYWLSTGAYTTSYSAVEFNGFP 380


>gi|7021323|gb|AAF35284.1|AF179245_1 ornithine decarboxylase [Coccidioides posadasii]
          Length = 447

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 51/360 (14%), Positives = 107/360 (29%), Gaps = 30/360 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y+ D  ++        +      VK   A+KC     +   +    +G   +S  E+ 
Sbjct: 71  PFYVADLGEVYR--QHIRWKMNLGRVKPFYAVKCNPDPQVLRLMAHLGNGFDCASKAEID 128

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                        Y    K        +          +    +K K     + + LRI 
Sbjct: 129 YVLAAGSTPSRIIYAHPCKTKSYLRYAAQQGVNEMTFDNADELYKIKTMCPDRDVFLRIL 188

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S S   L+        +     +  +    NV G+ FH     +    F   +++  
Sbjct: 189 TDDSASLCRLSMKFGASLTVTRSLLELAKDLGLNVVGVSFHVGSGAEDQQHFVKAVEDAR 248

Query: 184 KEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
             F         ++ + +GGG      +         L  +   + +++  EPG   V +
Sbjct: 249 FVFDQASDIGHDLKVLDVGGGFCDETFERFAAALSDALDTYFPPH-IRVIAEPGRYYVAS 307

Query: 241 TTTLNTTVLDIS--------------ENIKNLVIVDSSVEAHVPDYLLYQESA------- 279
             TL   V+                      ++ ++     +  + +   +         
Sbjct: 308 AFTLAANVIARRDVSPAASDSDSASGPAEMYMIYLNDGCYGNFSNIVFDHQHPVAQILTK 367

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP--VKIGDRISFEDVAGYNINRKNWFNGI 337
               +T P    + G +C   D+  +        + +G+ + FE++  Y       FNG 
Sbjct: 368 DDMDSTHPVEYSIWGPTCDGIDVITKRVTLNREVLGVGNWLYFENMGAYTQCSATRFNGF 427


>gi|16118733|gb|AAL14568.1|AF416740_3 LysA [Erwinia chrysanthemi]
          Length = 411

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 49/375 (13%), Positives = 101/375 (26%), Gaps = 32/375 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            ++ D   L  ++   +      GV+L  A+K  +   + D +   + G   SS  E+  
Sbjct: 25  AFVYDLTALRQHVSEVMAALP-PGVELYYAIKANSEKPILDAIAPLVHGFEISSGGEIAR 83

Query: 66  GHEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                  +   ++           A+    + +   +  ++ + + +A++      + I 
Sbjct: 84  VAGCGTRKPFVFSGPGKLDSDFDLALEQGVEAVHVESRHEIARLQQRARQHGVVQPVFIR 143

Query: 124 PSVS---------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174
            +                        + L +  +D   +    + G   H          
Sbjct: 144 VNPELASSLTSKLAMAGTPTPFGMDEADLADAVRDVDNASHLQLKGFHVHAMSHQMVVAR 203

Query: 175 FSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKY 225
              +L      +  +         I  +++GGGI       + +     C  L+    + 
Sbjct: 204 HQQLLDLYLTRWPQWKALSAHPQHITHLNVGGGIGVPYLTPERFDWPALCDYLRTRLAQQ 263

Query: 226 SVQIY--LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282
                   EPG  I          VLD   +     +V                +   I+
Sbjct: 264 PDAPIVRFEPGRFISAYCGYYAIEVLDKKRSHGKHFLVCRGGTHQFRLPVAQGHDHPVIH 323

Query: 283 -------PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WF 334
                           V G+ C   ++         V IGD +       Y  N  +  F
Sbjct: 324 LPLTSAPTTGETRDWTVVGQLCTPKNVLSRDQRLTDVNIGDLLVLPLAGAYGYNISHADF 383

Query: 335 NGINMPTIAVKNVDG 349
                P       DG
Sbjct: 384 LCHPRPGQYFTTEDG 398


>gi|261856421|ref|YP_003263704.1| Orn/DAP/Arg decarboxylase 2 [Halothiobacillus neapolitanus c2]
 gi|261836890|gb|ACX96657.1| Orn/DAP/Arg decarboxylase 2 [Halothiobacillus neapolitanus c2]
          Length = 430

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 49/381 (12%), Positives = 106/381 (27%), Gaps = 38/381 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP Y+     +   +     +   + + L  A+K      +   L++ +DG   +SL E+
Sbjct: 51  TPAYVYHLAAIDQQVAVVRAVLP-SNLHLHYAIKANPNQRIIQHLSRQIDGFDCASLAEM 109

Query: 64  MLGHEKFGGETH---AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
                    +         A  D E+   +S+   I   + ++L + +  A +  ++  +
Sbjct: 110 QQIIAIAPDKAAQASIAGPAKSDDELAFAISHGILINAESANELRRIQALAAQKKQRARV 169

Query: 121 RINPSVS-YSKFILADPNRPFSRLGEKCKDKI---------ESEIKNVNGLMFHNNCENK 170
            +  +     K             G   +D            S   ++ G   +   +N+
Sbjct: 170 ALRINPPFEVKGSGMKMGGGARPFGIDSEDIPTLIRQWQAETSSWIDLEGFHLYTGSQNR 229

Query: 171 SF----LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS---- 222
                   F A +  I +           ++LGGG                L+       
Sbjct: 230 DATALGAGFRAAMDLIIELSQACDFTPRHLNLGGGFGVVYHPQDAPLDLAALQPALLEVS 289

Query: 223 -----EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH--------- 268
                    V++ LE G  +V       T ++D   +     ++      H         
Sbjct: 290 ATAQTHWPGVRLNLELGRYLVAGAGIYLTRIVDKKTSRGKTYLLCDGGMHHHLALSGNLG 349

Query: 269 -VPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
            +        +         +   + G  C   D+ G+      + + D I       Y 
Sbjct: 350 QILRRNWPIIAIDQLNAPCTHPFDLAGPLCTPLDVLGQNQELPELAVSDVIGVLQSGAYG 409

Query: 328 INRKNW-FNGINMPTIAVKNV 347
           ++     F             
Sbjct: 410 LSASPNGFLSHPACGEYFLRD 430


>gi|218517060|ref|ZP_03513900.1| diaminopimelate decarboxylase protein [Rhizobium etli 8C-3]
          Length = 294

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 42/270 (15%), Positives = 78/270 (28%), Gaps = 20/270 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+     L  +         +    +  A+K  +   +  TL +   G    S  
Sbjct: 25  VGTPFYVYSTATLERHYRVFSEAFADMDSMVCYAMKANSNQAVLKTLGRLGAGIDVVSEG 84

Query: 62  EVMLGHEK-FGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E+              ++           A+ +        +  +L     +A       
Sbjct: 85  ELRRALAADIPASRIMFSGVGKTPSEMDFALEAGIYCFNVESEPELEILNQRAVSAGKKA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCEN 169
            +  RINP V           +  ++ G   +                V G+  H   + 
Sbjct: 145 PVSFRINPDVDAKTHSKISTGKKENKFGISWERARAIYAHAAKLPGIEVTGIDMHIGSQI 204

Query: 170 KSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD-----FCQRLKEF 221
                F    K +             I+ + +GGG+    KD          +   +K  
Sbjct: 205 TELQPFDDAFKLLRDLVATLRADGHTIDHVDIGGGLGVPYKDDNNPPPLPDAYAAIVKNQ 264

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251
               + ++  EPG  IV N   L T VL +
Sbjct: 265 LRDLNCKVITEPGRLIVGNAGILVTEVLYV 294


>gi|148556930|ref|YP_001264512.1| Orn/DAP/Arg decarboxylase 2 [Sphingomonas wittichii RW1]
 gi|148502120|gb|ABQ70374.1| Orn/DAP/Arg decarboxylase 2 [Sphingomonas wittichii RW1]
          Length = 413

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 47/378 (12%), Positives = 95/378 (25%), Gaps = 35/378 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   + + +          GV L  A+K      +   +   +DG   +S  E
Sbjct: 34  DTPLFVYDLAVVRDRIARFRAAFA--GVSLHYAVKANPHPPLVAAIAPLVDGIDVASAGE 91

Query: 63  VMLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
             L           ++     +D E+   +    T+   +  +  +     + + +   L
Sbjct: 92  AQLALDAGMDARRISFAGPGKRDRELAMAIEAGITLNLESEGEAERALAIGRGIGRTPRL 151

Query: 121 RINPSVS-YSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKS-- 171
            +  +     K             G   +       + V       GL      +     
Sbjct: 152 ALRINPDFELKGSGMKMGGGAKPFGVDAERAAPIIRRIVEAGADYRGLHIFAGSQALDAD 211

Query: 172 --FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---------KE 220
                  + L    +           ++LGGG          +    R+         + 
Sbjct: 212 ALVEAQRSALALAARVSVEAGVAPPHVNLGGGFGIPHFANDARLDESRVGGALSSALSRR 271

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY----- 275
                  +  +E G  +V       T ++D   +     +V      H            
Sbjct: 272 DPILAEAEFTIELGRWLVGEAGVYLTRIVDRKASHGETFLVVDGGLHHQLAASGNFGTVV 331

Query: 276 -QESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
            +                   V G  C   D  G+       K+GD ++      Y  + 
Sbjct: 332 RRNYPISLTKYSDSVKVEEVTVVGCLCTPIDRLGDHVGLPEAKVGDVVALYLAGAYGASA 391

Query: 331 KNW-FNGINMPTIAVKNV 347
               F G   P     + 
Sbjct: 392 SPQAFLGHPSPLEITIDG 409


>gi|289675926|ref|ZP_06496816.1| ornithine decarboxylase [Pseudomonas syringae pv. syringae FF5]
 gi|330895459|gb|EGH27784.1| ornithine decarboxylase [Pseudomonas syringae pv. japonica str.
           M301072PT]
 gi|330981896|gb|EGH79999.1| ornithine decarboxylase [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 387

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 54/361 (14%), Positives = 115/361 (31%), Gaps = 30/361 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+ +ID   +    D      +    K+  A+K   A  + + L +       +S+YE
Sbjct: 25  ETPFVVIDTDIISKAYDDLRAGFEF--AKVYYAVKANPAVEVINLLKEKGSSFDIASIYE 82

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +        G E  +Y    K  +               ++ + L      A      + 
Sbjct: 83  LDKVLSCGVGPERMSYGNTIKKSKDIRYFYEKGVRLFATDSEADLRNIAKAAPGSKVYVR 142

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177
           +        +        +   +        I +    +   G+ FH   + +    + A
Sbjct: 143 ILTE---GSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDA 199

Query: 178 MLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSV 227
            +  ++  F          ++ I++GGG                ++  + LKE       
Sbjct: 200 AIAKVKVIFERLKEEDGIVLKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDDLP 259

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIY 282
           +I LEPG ++++N   L + V+ ++        + +          +       +     
Sbjct: 260 EIILEPGRSLISNAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIETMDEAIKFPIWT 319

Query: 283 PNTGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337
              G     ++ G +C + DI  E +       + IGDR+ +     Y  +     FNG 
Sbjct: 320 EKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRMYWLSTGAYTTSYSAVEFNGF 379

Query: 338 N 338
            
Sbjct: 380 P 380


>gi|58038915|ref|YP_190879.1| ornithine decarboxylase [Gluconobacter oxydans 621H]
 gi|58001329|gb|AAW60223.1| Ornithine decarboxylase [Gluconobacter oxydans 621H]
          Length = 379

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 50/368 (13%), Positives = 104/368 (28%), Gaps = 30/368 (8%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP  ++D   +  +             K+  A+K   A  + D L         +S  E+
Sbjct: 16  TPCLVVDLDVVGAHYRALHDALPE--AKIYYAIKANPAPAILDRLVALGSSFDVASPAEI 73

Query: 64  MLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            +        +  +Y       +   +A        +F+++ +L K    A        L
Sbjct: 74  RMCLDAGATPDRISYGNTLKKAEWIREAHDLGISLFVFDSIEELEKLAKHAPGARVFCRL 133

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
            +    +             +      +           GL FH   +      +   + 
Sbjct: 134 AVENEGADWPLSRKFGTTLSNARALMLR--ARDLGLKPYGLSFHVGSQQTGVAAYDHAIA 191

Query: 181 NIE---KEFGHFITQIEWISLGGGIHFTDK------DYPVKDFCQRLKEFSEKYSVQIYL 231
                  +       ++ ++LGGG     +                L+      + +I L
Sbjct: 192 KAAGLYHDLRAQGVDLQMLNLGGGFPTHYRENVPSVQDFADTIHASLRTHFPDGAPEILL 251

Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP---------DYLLYQESATIY 282
           EPG  +V  +  +++ V+ +S     +                     + + Y    +  
Sbjct: 252 EPGRYMVGQSGVVSSEVILVSRRGGAVTDPRWVYLDIGRFGGLAETEGEAIRYTFRTSRD 311

Query: 283 PNTGPY-TAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRKN-WFNGI 337
            +       ++ G SC   DI  E +       ++ GDR+       Y     +  FNG 
Sbjct: 312 SDDATCSPCVLAGPSCDGVDIMYEKNRIPLPDSLECGDRVEILATGAYVSTYASVGFNGF 371

Query: 338 NMPTIAVK 345
              T    
Sbjct: 372 PPLTEYYI 379


>gi|255539090|ref|XP_002510610.1| ornithine decarboxylase, putative [Ricinus communis]
 gi|223551311|gb|EEF52797.1| ornithine decarboxylase, putative [Ricinus communis]
          Length = 416

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 51/363 (14%), Positives = 112/363 (30%), Gaps = 26/363 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y+++   +   +DT    R+   ++   A+KC +   +   L         +S  E+ 
Sbjct: 48  PFYVLNLGAVAELMDTW--SRQLPMIQPFYAVKCNSEPSLLGALAALGCNFDCASKVEIQ 105

Query: 65  LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                    +   Y    K       A     +   F++V +L+K      +    + L+
Sbjct: 106 TILSLGVSPDRIVYANPCKAESHLKYAASVGVNLTTFDSVYELDKISKLHPRCALLLRLK 165

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
                +     L        +  E      ++    V+G+ FH   E+ +   +   + +
Sbjct: 166 SPDDSAAKWASLGSKFGALPQEVEPLLRAAQAANLTVSGVSFHIGSESTNPNAYRTAIAS 225

Query: 182 IEKEFGHFI----TQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
            +  F          +  +++GGG        +            F+E   +++  EPG 
Sbjct: 226 AKAAFDTAGRLGMPPMTLLNVGGGFTAGSFFDEAATVINSALQDYFAEYPQLKVISEPGR 285

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVD---------SSVEAHVPDYLLY-----QESATI 281
                  TL  +++                             P   L        +   
Sbjct: 286 YFAETVFTLAASIIGKRVRDDVREYWLNDGVFGSFLCVAYGITPPACLPLALSSNRTNPT 345

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                 + + + G +C + D   E H    ++  D + F ++  Y+      FNG + P 
Sbjct: 346 CEGAPTHMSTLFGPTCDSVDKIVEEHQLPELETNDWLVFPNMGAYSKVCATNFNGFS-PD 404

Query: 342 IAV 344
           +  
Sbjct: 405 VVF 407


>gi|281357820|ref|ZP_06244306.1| Orn/DAP/Arg decarboxylase 2 [Victivallis vadensis ATCC BAA-548]
 gi|281315767|gb|EFA99794.1| Orn/DAP/Arg decarboxylase 2 [Victivallis vadensis ATCC BAA-548]
          Length = 388

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 54/367 (14%), Positives = 113/367 (30%), Gaps = 26/367 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP+ +++   +    +  L     +  ++  A+K   A  + + L         +S YE
Sbjct: 25  PTPFLVVNLNIVKMKYEELLQHFPFS--RIYYAVKANPATEVLELLRDLGSCFDIASRYE 82

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +          E  +Y    K                  ++ + L     +A        
Sbjct: 83  LDRVLSLGIEPERVSYGNTIKKPADIRYFYEKGVRLFATDSEADLRNIAKEAPGARVFCR 142

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +    S +   + L+        +                G+ FH   + +    + + +
Sbjct: 143 ILTEGSETA-DWPLSRKFGCHPDMAIDLVLLARELGLQPWGISFHVGSQQRDIGAWDSAI 201

Query: 180 KNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIY 230
             +   F +      ++  I++GGG          +         + L+E       +I 
Sbjct: 202 AKVRYIFDYLEGEGLKLSMINMGGGFPANYISKTNEMNVYSEEITRYLEEDFGDDFPEII 261

Query: 231 LEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285
           LEPG ++V     L + V+ IS+       K L +        +  +    +        
Sbjct: 262 LEPGRSLVGECGILVSEVVLISQKSSMGVDKWLYLDTGKFNGLIETWDESIKYPLYCEAR 321

Query: 286 GP--YTAMVCGRSCLAGDIFGEFHF---EKPVKIGDRISFEDVAGYNINRKN-WFNGINM 339
           G      ++ G +C + DI  E+        +K GDRI +     Y  +  +  FNG   
Sbjct: 322 GEPCEDFIIAGPTCDSQDIMYEYFRNPVPAYIKPGDRIYWLSTGAYTSSYCSVEFNGFPP 381

Query: 340 PTIAVKN 346
             +    
Sbjct: 382 LPVYFVK 388


>gi|82703782|ref|YP_413348.1| Orn/DAP/Arg decarboxylase 2 [Nitrosospira multiformis ATCC 25196]
 gi|82411847|gb|ABB75956.1| Orn/DAP/Arg decarboxylase 2 [Nitrosospira multiformis ATCC 25196]
          Length = 410

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 45/376 (11%), Positives = 104/376 (27%), Gaps = 34/376 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP+Y  D+Q+L + +         A + L  A+K      +   + + +DG   +S  E
Sbjct: 36  KTPFYAYDRQRLTDRVAFLRQHLP-AEIHLHYAMKANPMPAVVQHMARLVDGLDVASAGE 94

Query: 63  VMLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           + +  +        ++      D E+   ++    +   +  ++ +     + L  +  +
Sbjct: 95  MKVALDTPMPPGEISFAGPGKSDSELSCAIAAGIVLNMESEQEMERIAILGEYLGVRPKV 154

Query: 121 RINPSVSYSKFILADPNRPFSR-LGEKCKDK------IESEIKNVNGLMFHNNCENKSF- 172
            +  +  +     +       +  G   +        +     +  G    +  +N    
Sbjct: 155 AVRVNPDFELKSSSMKMGGGPKQFGVDAERVPAMLARLGRLALDFEGFHIFSGSQNLRVA 214

Query: 173 ---LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227
                     +       H    +  +++GGG                + E   +     
Sbjct: 215 ALQEAHEKTFQLGIALAKHAPAPVRMLNIGGGFGTPYFPGDEALDLAAVGENLRRLIPGV 274

Query: 228 -------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-------- 272
                  +I +E G  +V         VL+  E+   + ++      H            
Sbjct: 275 RQALPEARIVIELGRYLVAEAGIYVCRVLERKESRGQIFLITDGGLHHHLAASGNFGQVI 334

Query: 273 -LLYQESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
              Y               + V G  C   D+  +       + GD I       Y +  
Sbjct: 335 RKNYPVMVGNRVQGTDREVVSVVGPLCTPLDLLADRMEMSRAEAGDLIVVFQSGAYGLTA 394

Query: 331 KNW-FNGINMPTIAVK 345
               F     P   + 
Sbjct: 395 SPTAFLSHPPPMEMLV 410


>gi|224085964|ref|XP_002307756.1| predicted protein [Populus trichocarpa]
 gi|222857205|gb|EEE94752.1| predicted protein [Populus trichocarpa]
          Length = 416

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 53/362 (14%), Positives = 109/362 (30%), Gaps = 26/362 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y++D  ++   +D   ++     V    A+KC     +  +L         +S  E+ 
Sbjct: 49  PFYVLDLGEVTALMD--KWLMTLPMVHPFYAVKCNPDPALLGSLAALGSNFDCASRAEIE 106

Query: 65  LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                        Y    K       A     +   F++  +L+K +    K    I ++
Sbjct: 107 SVLSLGVSPNRIVYANPCKQESHIKYAASVGVNLTTFDSKEELDKIRKWHSKCALLIRIK 166

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
                     +                   ++   NV G+ FH          +   + +
Sbjct: 167 APDDSGARCPLGPKY-GALPDEVTPLLQAAQTAQLNVVGVSFHIGSGATRSRAYEGAIAS 225

Query: 182 IEKEFGH----FITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
            +  F       +  ++ +++GGG        +            F  +  + +  EPG 
Sbjct: 226 AKSVFEAAVRLGMPGMKILNIGGGFTAGSQFDEAATTIKSALQAYFPNEPGLTVISEPGR 285

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGP--- 287
               +  TL T ++                   S+   + D+     +     +      
Sbjct: 286 FFAESAFTLATNIIGKRVRGDLREYWINDGIYGSMNCILYDHATITCTPLACNSNHANLT 345

Query: 288 ------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                 Y++ V G +C A D     H    ++I D + F ++  Y     + FNG N   
Sbjct: 346 CKGLRAYSSTVFGPTCDALDTVLTGHQLPELQINDWLVFPNMGAYTAAAGSSFNGFNTAA 405

Query: 342 IA 343
           I 
Sbjct: 406 IL 407


>gi|240281644|gb|EER45147.1| ornithine decarboxylase [Ajellomyces capsulatus H143]
          Length = 446

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 56/360 (15%), Positives = 102/360 (28%), Gaps = 32/360 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y+ D  ++               VK   A+KC     +   +    +G   +S  E+ 
Sbjct: 69  PFYIADLGQVYRQHVRWKKNLGR--VKPFYAVKCNPDPQVLRLMANLGNGFDCASKAEID 126

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                        Y    K        S          +    +K K      ++ LRI 
Sbjct: 127 CALGAGVDPSRIIYAQPCKTKSYLRYASQVGVKQMTFDNSDELYKIKEMCPEAELYLRIL 186

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S S   L+        +     +  +    NV G+ FH     +    F   +++  
Sbjct: 187 TDDSASLCRLSMKFGASLSITRSLLELAKELKLNVIGVSFHVGSGAEDPRSFVKAVEDSR 246

Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
             F         ++ + +GGG      +         L E    + +++  EPG   V +
Sbjct: 247 YVFDQAAEVGFDLKVLDVGGGFSEDTFERFAATLGDALDEHFPPH-IRVIAEPGRYYVAS 305

Query: 241 TTTLNTTVLD----------------------ISENIKNLVIVDSSVEAHVPDYLLYQES 278
             TL   V+                       I  N        + +  H          
Sbjct: 306 AFTLAANVIARRDVSLEMSDSDSTSSATEAYMIYLNDGVYGNFSNIIFDHQHPVPQILTM 365

Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGI 337
            +      P    + G +C   D+  E       + +G+ + FE++  Y       FNG 
Sbjct: 366 ESPVC--TPIEYSIWGPTCDGIDLITERITLPGALDVGNWLYFENMGAYTKCSATCFNGF 423


>gi|217969813|ref|YP_002355047.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Thauera sp. MZ1T]
 gi|217507140|gb|ACK54151.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Thauera sp. MZ1T]
          Length = 415

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 49/375 (13%), Positives = 99/375 (26%), Gaps = 35/375 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+Y  D+  +   +           ++L  A+K      +   L + +DG   +S  E+
Sbjct: 41  TPFYAYDRGAIARRVAELRAALP-PAIELHYAMKANPMPALVGHLARLVDGIDVASAGEL 99

Query: 64  MLGHEKFGGETHAY--NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            +  +      H        +D E+   ++    +   +  ++    + A  L     + 
Sbjct: 100 QVALDAGADPQHVSFAGPGKRDTELRQAVAAGILVNVESFREIAPLAEAAAALGVPARVA 159

Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK---- 170
           +  +     K             G   +        I        G       +N     
Sbjct: 160 VRVNPDFELKSSGMKMGGGPKPFGVDAEQVPGLLAEISRAGLAFEGFHLFAGSQNLKAEA 219

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSEKYS 226
                    +   +   H    +  ++LGGG             +      L +   + +
Sbjct: 220 IVEAQRKSFELALRLAAHAPAPVRTLNLGGGFGIPYFPGEQALDLTPIAAGLADIVAEAA 279

Query: 227 V-----QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-----------VP 270
                 +I LE G  +V         + DI  +  +  +V      H           + 
Sbjct: 280 QALPEARIVLELGRYLVGEAGVYVCRITDIKVSRGHTYLVTDGGLHHHLSASGNFGQVIR 339

Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                     +        A V G  C   D+  +       +IGD I       Y  + 
Sbjct: 340 KNYPVAIGNRMDAPPAGEPASVVGPLCTPLDVIADRMPLPAAQIGDLIVVFQSGAYGASA 399

Query: 331 KNW-FNGINMPTIAV 344
               F G       +
Sbjct: 400 SPQAFLGHPQVVEIL 414


>gi|254477427|ref|ZP_05090813.1| Orn/DAP/Arg decarboxylases family 2 [Ruegeria sp. R11]
 gi|214031670|gb|EEB72505.1| Orn/DAP/Arg decarboxylases family 2 [Ruegeria sp. R11]
          Length = 395

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 52/362 (14%), Positives = 114/362 (31%), Gaps = 24/362 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D Q +                ++  A+K   A  +   L +      ++S  E+ 
Sbjct: 37  PTLVVDSQAVARQYAALAQGLGR--ARIHYAVKANPAPQILRRLTRMGANFDAASRAEIE 94

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           L            +    K     A         F   +     K         + +R+ 
Sbjct: 95  LCLAAGAKPAQITFGNTIKRPADIAFAHEIGITHFAADATAELEKLAQHAPGAHVCIRLL 154

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS---AMLK 180
              + + + L+      + +     D+       V+GL FH   + +    ++     + 
Sbjct: 155 VEATGADWPLSRKFGCSAAMALSLMDEARDLGLEVSGLSFHVGSQTREPQMWADTLDQVA 214

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEKYSV--QIYLEPGE 235
            + K        +  +++GGG   +       P +   + ++  + ++    +I  EPG 
Sbjct: 215 AVWKAAKDAGHGLRLLNIGGGFPASYGTEVMAPNQYAREVMELVNARFPDAAEIMAEPGR 274

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPNTGP 287
            +V     +   VL +S    + +           S +   + + + Y+   T +     
Sbjct: 275 GLVAEAGAIAAEVLLVSRKDADDLHRWVYLDIGKFSGLAETMDEAIRYR-ITTDHGEAQT 333

Query: 288 YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIA 343
              ++ G SC + D+  E   +     +K GDR+       Y        FNG     + 
Sbjct: 334 GPCILAGPSCDSADVLYEKQLYQLPLALKAGDRVVIHACGAYTSTYSTVGFNGFPPLDVV 393

Query: 344 VK 345
           V 
Sbjct: 394 VI 395


>gi|331019663|gb|EGH99719.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 402

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 61/377 (16%), Positives = 122/377 (32%), Gaps = 32/377 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            ++ D   L  ++   +     AGV+L  A+K  +   M +TL   + G   SS  E+  
Sbjct: 25  AFIYDLDALQQHVSEVMAALP-AGVELYYAIKANSEALMLETLAPLVSGFEISSGGEIER 83

Query: 66  GHEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKL--HKKIGLR 121
                  + + ++     D ++ + L N    +   +++++ + +  A++    + + +R
Sbjct: 84  VMACPTRKPYVFSGPGKLDSDLRSALLNKVEAVHLESLNEIQRLQHLAEEAGRVQPVFIR 143

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENKSFLC 174
           INP +  ++          +  G    D  E+           + G   H      S   
Sbjct: 144 INPQLPAAQSSKLAMAGTATPFGIDEADLAEAVRLVDSATHLTLKGFHVHAMSHQMSVER 203

Query: 175 FSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKY 225
              +L    + +  +        Q+   ++GGGI       + +  +   + L++   + 
Sbjct: 204 HEQLLDFYLQRWQAWKALARHPEQLTHFNVGGGIGVDYLNSQQFDWQRLFRYLEKRLGEQ 263

Query: 226 SVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282
                L  EPG  I          VLD   +     +V                +   I+
Sbjct: 264 PDSPILRFEPGRFISAYCGYYVIEVLDRKTSHGEHFLVCRGGTHQFRLPVAQSHDHPVIH 323

Query: 283 PNTGPYT-------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WF 334
             + P T         V G+ C   D+       K V IGD +       Y  N  +  F
Sbjct: 324 LPSVPPTAASPEQAYTVVGQLCTPKDVLSRRQPFKDVNIGDLLVLPMAGAYGYNISHADF 383

Query: 335 NGINMPTIAVKNVDGTI 351
                P          +
Sbjct: 384 LCHPRPPQHFVRNGERV 400


>gi|258566646|ref|XP_002584067.1| predicted protein [Uncinocarpus reesii 1704]
 gi|237905513|gb|EEP79914.1| predicted protein [Uncinocarpus reesii 1704]
          Length = 493

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 56/370 (15%), Positives = 107/370 (28%), Gaps = 40/370 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y++D++ + + L           V+   A+KC     +   L ++  G   +S  E+  
Sbjct: 40  FYVVDEEFIHSQLRMWASKFG--HVQPFYAVKCNDNPRLLSILAKHGTGFDCASQSEIKR 97

Query: 66  GHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
             +     +   Y    K  +    A        +F++  +L K          ++ LR+
Sbjct: 98  ILDLGVKPDRILYAAPIKSEDHILYAKEHGVVQTMFDSEDELRKLVKL--FPPAQLYLRL 155

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC-------ENKSFLCF 175
                 S+  L D         ++           V GL FH            ++    
Sbjct: 156 WADDPTSRVRLCDKFGVQLPQAKRLLTLARELNMTVVGLCFHVGSSASDCDAYRRAIALS 215

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-KYSVQIYLEPG 234
             +    E         I  I +GGG    + D  V+   + ++E       ++   EPG
Sbjct: 216 REVYDYNESFGADKRHPIRTIDVGGGFSRGNFDNAVRAINEGIQEHFGADNQLRWVAEPG 275

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES---------------- 278
                    L   V+                   V D  +                    
Sbjct: 276 RYFPDEAFHLVCRVIGTRPRPSLSDEPPPGEAFPVGDVYINDGIYRNFLNAITEQVVPPA 335

Query: 279 --------ATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFEDVAGYNIN 329
                     +  +    T ++ G++C + D         +  K+GD + F  +  Y   
Sbjct: 336 RLLDCTGSPYVRGDDTEDTYVLWGQTCDSFDKINSSCVLPRRAKVGDWVYFPSMGAYTHV 395

Query: 330 RKNWFNGINM 339
             N FNG   
Sbjct: 396 TANDFNGFPK 405


>gi|85374200|ref|YP_458262.1| ornithine/diaminopimelate/arginine decarboxylase,family protein
           [Erythrobacter litoralis HTCC2594]
 gi|84787283|gb|ABC63465.1| ornithine/diaminopimelate/arginine decarboxylase,family 2
           [Erythrobacter litoralis HTCC2594]
          Length = 420

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 42/376 (11%), Positives = 105/376 (27%), Gaps = 34/376 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++  +  +   +           + +  A+K  +   +   +   ++G   +S  E
Sbjct: 46  GTPLFVYSRDIIAGTMRHLREAMPER-LHINYAIKANSHPEVLAFMADLVEGYDIASGGE 104

Query: 63  VMLG-HEKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           +             ++     +D E++A +    T+   +  +  +  + A++L +   L
Sbjct: 105 LEKIQAAGIDTRRVSFAGPGKRDRELEAAIEAGVTLNLESEGEARRALEIAERLGQTPRL 164

Query: 121 RINPSVSYSKFILADPNRPFSR-LGEKCKDKIESEIKNV------NGLMFHNNCENK--- 170
            I  +  +            ++  G   +       + +       GL  +   +     
Sbjct: 165 AIRVNPDFDMKGSGMKMGGGAKPFGIDAERVPALGSEIIAAGGEWRGLHIYTGSQALSAE 224

Query: 171 -SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227
                 + +L   +K        +  +++GGG              + +    E+     
Sbjct: 225 AIIETQANVLALADKIASEMGEALPKLNMGGGFGIPYFHGDEPLDIEAIGSALEERFGDL 284

Query: 228 -------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-------- 272
                   + +E G  +V         ++D   +     +V      H            
Sbjct: 285 PETLADAHLCIELGRYLVGLAGVYLCRIVDRKVSHGETFLVTDGGLHHQLAASGNFGTVV 344

Query: 273 -LLYQESATIYPNTGPYTA-MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
              Y  +     +  P     V G  C   D   +  F     +GD ++      Y  + 
Sbjct: 345 RRNYPAAIATRFDAPPVEVQHVVGCLCTPLDRLSDKAFLPRADVGDIVAIFCAGAYGASA 404

Query: 331 KN-WFNGINMPTIAVK 345
               F G       + 
Sbjct: 405 SPAEFLGQGPAREVLV 420


>gi|325087796|gb|EGC41106.1| ornithine decarboxylase [Ajellomyces capsulatus H88]
          Length = 446

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 56/360 (15%), Positives = 102/360 (28%), Gaps = 32/360 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y+ D  ++               VK   A+KC     +   +    +G   +S  E+ 
Sbjct: 69  PFYIADLGQVYRQHVRWKKNLGR--VKPFYAVKCNPDPQVLRLMANLGNGFDCASKAEID 126

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                        Y    K        S          +    +K K      ++ LRI 
Sbjct: 127 CALGAGVDPSRIIYAQPCKTKSYLRYASQVGVKQMTFDNSDELYKIKEMCPEAELYLRIL 186

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S S   L+        +     +  +    NV G+ FH     +    F   +++  
Sbjct: 187 TDDSASLCRLSMKFGASLSITRSLLELAKELKLNVIGVSFHVGSGAEDPRSFVKAVEDSR 246

Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
             F         ++ + +GGG      +         L E    + +++  EPG   V +
Sbjct: 247 YVFDQAAEVGFDLKVLDVGGGFSEDTFERFAATLGDALDEHFPPH-IRVIAEPGRYYVAS 305

Query: 241 TTTLNTTVLD----------------------ISENIKNLVIVDSSVEAHVPDYLLYQES 278
             TL   V+                       I  N        + +  H          
Sbjct: 306 AFTLAANVIARRDVSLEMSDSDSTSSATEAYMIYLNDGVYGNFSNIIFDHQHPVPQILTM 365

Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGI 337
            +      P    + G +C   D+  E       + +G+ + FE++  Y       FNG 
Sbjct: 366 ESPVC--TPIEYSIWGPTCDGIDLITERITLPGALDVGNWLYFENMGAYTKCSATCFNGF 423


>gi|257093227|ref|YP_003166868.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
 gi|257045751|gb|ACV34939.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 401

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 46/376 (12%), Positives = 98/376 (26%), Gaps = 34/376 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+Y  D+Q L   +         + +KL  A+K      +   +   +DG   +S  E
Sbjct: 27  QTPFYAYDRQLLTRRVALLRAALPAS-LKLHYAMKANPMPALVCHMAGLVDGIDVASAGE 85

Query: 63  VMLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           + +           ++     +  E+   ++    I   +  ++ +    + +      +
Sbjct: 86  LKVALDAGANPREISFAGPGKRRAELSQAVAAGILINIESFREVAELAAISHETGCAGRV 145

Query: 121 RINPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF- 172
            +  +     K           + G   +        I        G       +N    
Sbjct: 146 AVRVNPDFELKSSGMKMGGGARQFGVDAEQVPDLLTEIGRYGLAFEGFHLFAGSQNLRPE 205

Query: 173 ---LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL---------KE 220
                     +   +  G     + +++LGGG                +         + 
Sbjct: 206 AIAEAQIKSFELALRLAGSAPAPVRFLNLGGGFGIPYFPGEQHLELAPIGANLSGIVERA 265

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-------- 272
             E  + ++ +E G  +V       T +LD   +     +V      H            
Sbjct: 266 ARELPAAELVIELGRYLVGEAGLYVTRILDRKTSRGQTFLVTDGGLHHHLSASGNFGQVI 325

Query: 273 --LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                             T  V G  C   D+  E       + GD +       Y +  
Sbjct: 326 RKNYPVAIGNRMIPARLETVSVVGPLCTPLDLLAERMELAEAQAGDLVVVHQSGAYGMTA 385

Query: 331 KNW-FNGINMPTIAVK 345
               F G       + 
Sbjct: 386 SPQAFLGHPACVEILV 401


>gi|163758927|ref|ZP_02166014.1| putative ornithine, dap, or arginine decarboxylase protein [Hoeflea
           phototrophica DFL-43]
 gi|162284217|gb|EDQ34501.1| putative ornithine, dap, or arginine decarboxylase protein [Hoeflea
           phototrophica DFL-43]
          Length = 377

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 45/359 (12%), Positives = 102/359 (28%), Gaps = 33/359 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   + +N  +           +  A+K   A  +   L         +S+ E+ 
Sbjct: 18  PCLVVDLDVVRDNFVSFRKAL--PDSSIYYAVKANPAPEILRLLAGLGSNFDCASVAEIE 75

Query: 65  LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +           +Y      +     A          ++  ++ K    A        + 
Sbjct: 76  MALKAGATSARVSYGNTIKKERDIARAHALGVTLFAVDSHEEVEKIARAAPGARVFCRVL 135

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV--NGLMFHNNCENKSFLCFSAML 179
            +   +           P   +       + +    +  +G+ FH   +      + A L
Sbjct: 136 TDGEGAEWPLSRKFGCVPQMAVDV----LVYAHQLGLVSHGVSFHVGSQMTKLDAWDAAL 191

Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIY 230
            +  + F         ++ +++GGG                      L++       +  
Sbjct: 192 SDARRVFDKLAQQGIHLKMVNMGGGFPTRYLKDIPTAQAYGQAIHGSLRKHFGNNIPETI 251

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282
           +EPG  +V N   +   V+ +S       +            +   + + + Y    T  
Sbjct: 252 IEPGRGMVGNAGAIKAEVVLVSRKSDEDDVRWVFLDIGKFGGLAETMDEAIRYS-IVTPR 310

Query: 283 PNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337
                   ++ G +C + D+  E   +     + IGD +  E    Y        FNG 
Sbjct: 311 DGDEMEPCVLAGPTCDSADVLYEKTPYPMPVSLTIGDEVLIEGTGAYTTTYSAVAFNGF 369


>gi|126665613|ref|ZP_01736595.1| decarboxylase, ornithine/DAP/arginine decarboxylase family 2
           [Marinobacter sp. ELB17]
 gi|126630241|gb|EBA00857.1| decarboxylase, ornithine/DAP/arginine decarboxylase family 2
           [Marinobacter sp. ELB17]
          Length = 391

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 51/361 (14%), Positives = 111/361 (30%), Gaps = 30/361 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+ +ID   + ++ +  +        ++  A+K   A  +   L         +S+YE
Sbjct: 29  QTPFVVIDTATIDSHYNELVEGFPY--AQVYYAVKANPAPQVLTLLRDKGANFDIASVYE 86

Query: 63  VMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +          E  ++                       ++ + L    + A      + 
Sbjct: 87  LEQVMALGVTAERISFGNTIKKAKDVRTFYEKGVRMFATDSEADLRNIAEVAPGSKIYVR 146

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177
           +                 +   +        I +    +   G+ FH   + +    + A
Sbjct: 147 ILTE---GTLTADWPLSRKFGCQQDMAMDLLILARDLGLVPYGVSFHVGSQQREIGAWDA 203

Query: 178 MLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSV 227
            L  ++  F         +++ I++GGG          +         + L+E       
Sbjct: 204 ALGTVKVIFERLKEEDGIELKMINMGGGFPANYITRANEVKVYAEEIGRFLREDFGDELP 263

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIY 282
           +I +EPG ++++N   L + V+ IS        + +          +       +     
Sbjct: 264 EIIIEPGRSLISNAGVLVSEVVLISRKSSTALHRWVYTDVGKFSGLIETLDEAIKFPIWT 323

Query: 283 PNTGP-YTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRKN-WFNGI 337
              G     ++ G +C + DI  E H       + IGDR+ +     Y        FNG 
Sbjct: 324 EKDGEGEDCVIAGPTCDSADIMYEDHKYPLPLSLAIGDRMYWFSTGAYTTTYSAVGFNGF 383

Query: 338 N 338
            
Sbjct: 384 P 384


>gi|317038522|ref|XP_001401610.2| ornithine decarboxylase [Aspergillus niger CBS 513.88]
          Length = 454

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 57/366 (15%), Positives = 114/366 (31%), Gaps = 39/366 (10%)

Query: 5   PYYLID-------KQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTS 57
           P+Y+ D          L N L+      + +      A+KC     +   + +  +G   
Sbjct: 74  PFYVADMGGGLPPASALENELEPCSAFLRESI-----AVKCNPDPEILRLMAKLGNGFDC 128

Query: 58  SSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
           +S  E+ +  E         Y    K        +          +    +K KA     
Sbjct: 129 ASKAEIDMALETGVDPSRIIYAQPCKTKSYLRYAAQVGVKQMTFDNADELYKIKANYPDA 188

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
           ++ LRI    S S    +        +  +  +        V G+ FH     +    F 
Sbjct: 189 ELYLRILTDDSNSLCQFSMKFGASLDVARQLLELAHQLELKVVGVSFHVGSGAEDPKAFL 248

Query: 177 AMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
             +++    F        ++  + +GGG      +       + L+ +     +++  EP
Sbjct: 249 KAVQDARLVFDQAAEIGHELHTLDVGGGFSQDTFEKFAGVLSEALETYFPPN-IRVIAEP 307

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP------ 287
           G   V N  TL   ++   E        + +   ++ D +    S  I+ +  P      
Sbjct: 308 GRYYVANAFTLAANIIARREVRDPEDPANDAYMLYLNDGVYGNFSNIIFDHQHPVAQVLT 367

Query: 288 ---------------YTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331
                           T  + G +C   D+  +       +++GD + FE++  Y     
Sbjct: 368 CASAANSPYAATSGGVTYSIWGPTCDGIDVISKRIALPALLEVGDWLYFEEMGAYTKCSA 427

Query: 332 NWFNGI 337
             FNG 
Sbjct: 428 TRFNGF 433


>gi|89094856|ref|ZP_01167789.1| Ornithine decarboxylase [Oceanospirillum sp. MED92]
 gi|89080911|gb|EAR60150.1| Ornithine decarboxylase [Oceanospirillum sp. MED92]
          Length = 385

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 52/359 (14%), Positives = 111/359 (30%), Gaps = 26/359 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP+  +D   +        +    A   +  A+K   A  + + L         +S  E
Sbjct: 23  PTPFLAMDLSVVEKRYVELEHGFPEAD--IFYAVKANPADEVIELLASKGSSFDIASPQE 80

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +          E  +Y    K                  ++ + L      A   +  I 
Sbjct: 81  LDKVLAYGVPAERMSYGNTIKKASAIKYFYEQGVRLFATDSEADLQNIAKYAPGSNIYIR 140

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +  + S     + L+        +  +     +    N  G+ FH   + +    +   +
Sbjct: 141 VLTDGSEGA-DWPLSRKFGCNPEMAYELAVLAKELGLNPYGVSFHVGSQQRDIDVWDGAI 199

Query: 180 KN----IEKEFGHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYS----VQI 229
                  E+       ++E I++GGG       K      + + +K F  +       +I
Sbjct: 200 AKVKVIFERLLEEAGIRLEMINMGGGFPAIYLQKTNEFTTYAEEIKRFLREDFGEDIPRI 259

Query: 230 YLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
            LEPG ++V +   + + V+ IS        + +          +       +       
Sbjct: 260 ILEPGRSLVGDAGVIVSEVVLISRKSSTALERWVYTDVGMFNGLIETLGEAIKYPISSSR 319

Query: 285 TG-PYTAMVCGRSCLAGDIFG---EFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338
            G     ++ G +C + DI     ++     ++IGD + +     Y  +  +  FNG  
Sbjct: 320 QGEEEEVILAGPTCDSLDIMYEQFKYKLPLSLEIGDHVFWYSTGAYTTSYSSIEFNGFP 378


>gi|75303413|sp|Q8S3N2|DCOR_CAPAN RecName: Full=Ornithine decarboxylase; Short=ODC; AltName:
           Full=CaODC1; AltName: Full=CapODC
 gi|19387300|gb|AAL87201.1|AF480882_1 ornithine decarboxylase [Capsicum annuum]
          Length = 435

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 52/362 (14%), Positives = 111/362 (30%), Gaps = 26/362 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y++D  ++++ +D          V+   A+KC         L         +S  E+ 
Sbjct: 68  PFYVLDLGEVVSLMDQWNVAL--PNVRPFYAVKCNPEPSFLSMLAAMGSNFVCASRAEIE 125

Query: 65  LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                    E   +    K       A     +   +++  ++ K K    K    + ++
Sbjct: 126 YVLSLGISPERIVFANPCKPESDIIFAEKVGVNLTTYDSEDEVYKIKKHHPKCELLLRIK 185

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE----NKSFLCFSA 177
                +    +            E      ++    V+G+ FH        N      +A
Sbjct: 186 PMNDGNARCPMGPKY-GALPEEIEPLLRIAQASRLTVSGVSFHIGSGDADSNAYLGAIAA 244

Query: 178 MLKNIEKEFGHFITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
             +  E      ++++  + +GGG                   + FS +  + I  EPG 
Sbjct: 245 AKQVFETAAKFGMSKMNVLDIGGGFTSGHQFTTAATAVKSALQQHFSNEPELTIIAEPGR 304

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPN------ 284
                  TL TT++                   S+   + D+     +     +      
Sbjct: 305 FFAETAFTLATTIIGKRVRGDLREYWINDGLYGSMNCVLYDHATVTATPLACMSNRVNLN 364

Query: 285 ---TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
              +  + + + G +C A D     +    +++ D + F ++  Y     + FNG N   
Sbjct: 365 CSGSKMFPSTIFGPTCDALDTVLRDYHVPELQVNDWVIFPNMGAYTKAAGSNFNGFNTSA 424

Query: 342 IA 343
           I 
Sbjct: 425 IV 426


>gi|291301207|ref|YP_003512485.1| Orn/DAP/Arg decarboxylase 2 [Stackebrandtia nassauensis DSM 44728]
 gi|290570427|gb|ADD43392.1| Orn/DAP/Arg decarboxylase 2 [Stackebrandtia nassauensis DSM 44728]
          Length = 388

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 54/369 (14%), Positives = 95/369 (25%), Gaps = 30/369 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            Y+ D   L   +            +L  A+K  +   +     QY DG   +S  E+  
Sbjct: 22  AYVYDLAALSERIAAVKAALP-PQTRLFYAMKANSRPELVARAAQYCDGIEIASPGELAT 80

Query: 66  GHEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                         +  D  + A        T+    + +L +    A++      + + 
Sbjct: 81  AIAAGARHLIYGGPSKTDAALTAALSCGTPVTVNVEGLHELRRLDRLARQHGTVAEIALR 140

Query: 124 PSVSYSKFIL-ADPNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNCENKSFLCF 175
            + +              +  G       ++           + GL  H    N      
Sbjct: 141 VNRATETPGGTHRMTGTPTPFGIDAAHLDDAVDLARRLPGVRLTGLHLHAVSNNLDAAAH 200

Query: 176 SAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYL 231
           +  +    +             E ++LGGGI          D          + +V    
Sbjct: 201 ARFVAEALEYAADTATRHGLTWETVNLGGGIGVDPAGGSEFDLAD-FAARLTRPAVTTIF 259

Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH--VPDYLLYQE-----------S 278
           E G  +   T    T V DI         V      H  +P    Y              
Sbjct: 260 ELGRYLAAETGWYATEVTDIKTTHGRTFAVVRGGTHHFRLPAAWGYDHPAAVHPVDEWPY 319

Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337
               P     T  V G  C   D+         +++GD + F     Y  +  +  F   
Sbjct: 320 PWQRPEARDTTVDVTGELCTPRDVLCRDLPVSRLRVGDVLVFGRTGAYGWDISHHDFLSH 379

Query: 338 NMPTIAVKN 346
             P   V +
Sbjct: 380 PHPDTVVLD 388


>gi|149189477|ref|ZP_01867761.1| diaminopimelate decarboxylase [Vibrio shilonii AK1]
 gi|148836634|gb|EDL53587.1| diaminopimelate decarboxylase [Vibrio shilonii AK1]
          Length = 526

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 55/417 (13%), Positives = 124/417 (29%), Gaps = 56/417 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK---LLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P +++ +  L NNL        N   K   ++ A+K    + +    N+   G     
Sbjct: 70  GSPLFVLSEDTLRNNLRRVKNAFGNYWPKPVNVMFAIKSNTNFAVRAICNEEGVGGDCFG 129

Query: 60  LYEVMLGH-EKFGGETH-AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             EV   +      +T         +  I   +     I  ++  ++   +  A+++   
Sbjct: 130 PGEVEATYIAGADPKTIALNGTVKPELAIRKAIEYGYAIHLDSYEEIEIVERIAREVKPA 189

Query: 118 IGLRI-------------NPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKN 157
             +RI             +       F        + + G   ++  +        ++  
Sbjct: 190 EKVRIAVRLKVIPEDFFNDFEPDAYPFPNFIGAMKWIKFGLLKEEAKKIINRVKEIDMFE 249

Query: 158 VNGLMFHNNCENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV-- 211
             G   H    +K    + A+ +   +           Q   + LGGG     +      
Sbjct: 250 FYGFHTHLGRFSKRPEGWDALYREYARNIIEISRECGVQPFQVDLGGGWPREREPECRSK 309

Query: 212 ---------KDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENI 255
                    +D+ + +     +          Q++LEPG  I  N  TL T+V  + ++ 
Sbjct: 310 EHMMNPNTIEDYAKVVCGGMLEEFTKEGFEVPQLWLEPGRYIAGNIGTLLTSVYVVKDDQ 369

Query: 256 KNLVIVDSSVEAHVPDY--------LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFH 307
           +          +                  +  +       T  + G  C+   I+    
Sbjct: 370 EMDYTYTMVDASTYLATLVESQESKNPVLPANKMTQPLVERTTEIAGPICIPS-IWESGA 428

Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
               ++  D ++  DV  Y  ++ + FN +  P   +          R  + +D + 
Sbjct: 429 RMPALQPKDVLAIMDVGHYAESQASQFNSLPRPATVLVKDGEAELIKRAETVDDVFA 485


>gi|33945616|emb|CAD91349.1| ornithine decarboxylase [Glycine max]
          Length = 434

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 48/365 (13%), Positives = 110/365 (30%), Gaps = 35/365 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP+ ++D   ++  +D   +  K   V+   A+KC     +   L         +S  
Sbjct: 57  IDTPFSVLDLGVVMGLMD--QWACKLPTVQPFYAVKCNPNLSLIGALAALGSSFDCASKA 114

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+          +   Y    K             +   ++++ ++ K +         +
Sbjct: 115 EIESVLSLGVSPDRIIYANPCKSESHIRYAASVGVNVTTYDSIDEVEKIRKCHPTCELLL 174

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK---NVNGLMFHNNCENKSFLCF 175
            ++                  +  L E+  + +++  +    V G+ FH          +
Sbjct: 175 RIKPPQDSGART----SLGLKYGALPEEVDELLQAAHEAGLKVTGVSFHIGSGGADTRAY 230

Query: 176 SAMLKNIEKEFGH----FITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQI 229
              +   +  F       + ++  + +GGG     + +   +K        F ++  + +
Sbjct: 231 HGAISAAKNVFESASRLGLPRMGVLDIGGGFTSGPSFEAAALKINAAIEGSFGKEEGLVV 290

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------------DSSVEAHVPDYLLY 275
             EPG        TL T V+                          D +    +P     
Sbjct: 291 IGEPGRYFAETAFTLATRVIGKRVRGDVREYWIDDGIYGTLNNIVFDYATVTCMPLACTS 350

Query: 276 QESATIYPNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
           +              Y + V G +C + D     +    +++ D + F ++  Y  +   
Sbjct: 351 KPENPTCCRDLNLKTYPSTVFGPTCDSIDTVLRDYQLPELQVNDWLVFPNMGAYTTSSGT 410

Query: 333 WFNGI 337
            FNG 
Sbjct: 411 NFNGF 415


>gi|125808167|ref|XP_001360660.1| GA21280 [Drosophila pseudoobscura pseudoobscura]
 gi|54635832|gb|EAL25235.1| GA21280 [Drosophila pseudoobscura pseudoobscura]
          Length = 395

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 51/357 (14%), Positives = 103/357 (28%), Gaps = 25/357 (7%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
             + D   +    +  +       +    A+KC     +   L +   G   +S  EV L
Sbjct: 34  LNICDLSSVERKYNLWVKYLPR--ITPYYAVKCNDDPMIVKVLAELGAGFDCASKNEVKL 91

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   +    +                   ++   +K         + +R   
Sbjct: 92  VLGLDVAPERIIFANPCRPVSHLEYAQQHRVANGTVDNEFEIYKLHKHYPQSNLIVRFKS 151

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKI-ESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
               ++  L D     +         + ++    V G  FH          +   +K  +
Sbjct: 152 EAKEAQCPLGDKFGCDADADATALMLLAKALDLKVTGTSFHVGSGCSELEAYDRAIKKAK 211

Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV----QIYLEPGEA 236
             F         + ++ +GGG   +D     +   + +    +++      QI  EPG  
Sbjct: 212 NIFKFGELLGYDMNFLDIGGGFPGSDDGK-FQKIAEIVNTSVQRHFPDDRVQIIAEPGRF 270

Query: 237 IVTNTTTLNTTVLDIS-----------ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285
            V    TL   +                       V  S    + D+ +      +  + 
Sbjct: 271 FVAAAYTLVCKIHAKREVRNEAGKLDTIMYYLNDGVYGSFNCILYDHQVVTPEHYLDESE 330

Query: 286 G--PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
               + +++ G SC A D   E      +  GD I F ++  Y +   + FNG  +P
Sbjct: 331 AFPEFKSLIWGPSCDALDKISEDLRLPNLNRGDLIGFPNMGAYTVPIASPFNGFEVP 387


>gi|114052146|ref|NP_001040457.1| ornithine decarboxylase [Bombyx mori]
 gi|95102974|gb|ABF51428.1| ornithine decarboxylase [Bombyx mori]
          Length = 444

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 67/369 (18%), Positives = 111/369 (30%), Gaps = 28/369 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y++D  +++        +     V+   A+KC     +  TL     G   +S  E+ 
Sbjct: 34  PFYVMDLGEVVARYQQWKELLPR--VEPFYAVKCNDDKLLLTTLAALGTGFDCASKAEIE 91

Query: 65  LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           L        E   +            A     D + F++  +L K K         I +R
Sbjct: 92  LVTSLGVPPERIIFANPAKMASHIRYASAVGVDVMTFDSEIELMKIKQYMPHAQLLIRIR 151

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
            + + +     +     P +      K        +V G+ FH          F   ++ 
Sbjct: 152 CDAASAQCPLGIKFGCDPVTEAPRLLK-LASVLGLDVAGVSFHVGSGAAEAAVFGRGVQL 210

Query: 182 IEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQ-----RLKEFSEKYSVQIYLEP 233
               F        +   + LGGG       +             L+    + SV++  EP
Sbjct: 211 ARSLFSAARDLGLRPRLLDLGGGYPGIAAQHHFMLEIAEVVNAALESHFPERSVRVVAEP 270

Query: 234 GEAIVTNTTTLNTTVL-------------DISENIKNLVIVDSSVEAHVPDYLLYQESAT 280
           G        TL   V              D          V  S    + D+ +      
Sbjct: 271 GRYFAAAAYTLAAMVHSKREIPAKEGEDADTHTMYFINDGVYGSFNCVLYDHQIVSAEPL 330

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                      V G SC A D   E     P+  GD + F D+  Y I   + FNG  +P
Sbjct: 331 HDRADSVLPCSVWGPSCDALDCVMESALLPPLDAGDWLVFRDMGAYTIPIASPFNGFPVP 390

Query: 341 TI-AVKNVD 348
            + AV +  
Sbjct: 391 RVRAVVDAG 399


>gi|149190404|ref|ZP_01868676.1| diaminopimelate decarboxylase [Vibrio shilonii AK1]
 gi|148835783|gb|EDL52748.1| diaminopimelate decarboxylase [Vibrio shilonii AK1]
          Length = 508

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 53/417 (12%), Positives = 119/417 (28%), Gaps = 56/417 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK---LLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P +++ +  L  NL        N   K   ++ A+K    + +    N+   G     
Sbjct: 70  GSPLFVLSEDTLRGNLRRVKNAFGNYWPKPVNVMFAIKSNTNFAVRAICNEEGVGGDCFG 129

Query: 60  LYEVMLGH-EKFGGETH-AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             EV   H      +T         +  I   +     I  ++  ++   +  A+++   
Sbjct: 130 PGEVEATHIAGADPKTIALNGTVKPELAIRKAIEYGYAIHLDSYEEIEIVERIAREVKPA 189

Query: 118 IGLRI-------------NPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------KN 157
             +RI             +       F        + + G   ++  +            
Sbjct: 190 EKVRIAVRLKVIPEDFFNDFEPDAYPFPNFIGAMKWIKFGLLKEEAKKIINRVKEIDIFE 249

Query: 158 VNGLMFHNNCENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYP--- 210
             G   H    +K    + A+ +   +           Q   + LGGG     +      
Sbjct: 250 FYGFHTHLGRFSKQPEGWDALYREYARNVIEISRECGVQPFQVDLGGGWPREREPECRSK 309

Query: 211 -VKDFCQRLKEFSEKYSVQI--------------YLEPGEAIVTNTTTLNTTVLDISENI 255
                   ++++++     +              +LEPG  I  N  TL T+V  + ++ 
Sbjct: 310 EHMMNSNTIEDYAKIVCEGMLEEFTKEGFEVPQLWLEPGRYIAGNIGTLLTSVYVVKDDQ 369

Query: 256 KNLVIVDSSVEAHVPDY--------LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFH 307
           +          +                  +  +       T  + G  C+   I+    
Sbjct: 370 EMDYTYTMVDASTYLATLVESQESKNPVLPANKMTQPLVKKTTEIAGPICIPS-IWESAA 428

Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
               ++  D ++  DV  Y  ++ + FN +  P   +          R  +  D + 
Sbjct: 429 TMPALEPKDVLAIMDVGHYAESQASQFNSLPRPATVLVKDGQAELIKRAETVEDVFA 485


>gi|46123051|ref|XP_386079.1| hypothetical protein FG05903.1 [Gibberella zeae PH-1]
          Length = 448

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 58/365 (15%), Positives = 109/365 (29%), Gaps = 37/365 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++        + +    V+   A+KC     +   L++   G   +S  E+  
Sbjct: 67  FFVADLGEVYR--QHLRWKKNLPRVRPFYAVKCNPDPQIIKLLSELGTGFDCASKTEIEQ 124

Query: 66  GH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   +   Y    K       + +         +    +K        ++ LRI  
Sbjct: 125 VLSAGLSPDRIIYAQPCKTNSYVRYVKSVGVKQMTFDNADELYKIAKLYPGAELFLRIMT 184

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S S    +          E      +    NV G+ FH        L F   +++   
Sbjct: 185 DDSESLCRFSMKFGAAMDTTEGLLALAKDLGLNVVGVSFHVGSGASDPLAFFKAVRDAHT 244

Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            F     F   +  + +GGG    T +           + F     V+I  EPG   V  
Sbjct: 245 VFQQARDFGFAMRTLDVGGGFCGDTFEAMANVLRGALDEFFPPHSGVEIIAEPGRYYVAT 304

Query: 241 TTTLNTTVLDIS-----------ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-- 287
             T+   ++                +     V  +    + D+   Q +A I   +G   
Sbjct: 305 AFTIACNIIARRTVEDPTLDGKGYMLYVNDGVYGNFSNIMFDHQ--QPTAKILRTSGKTL 362

Query: 288 --------------YTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYNINRKN 332
                         +   + G +C   D   +   F+  + +GD + FED+  Y      
Sbjct: 363 FETAAAEPTPVGEGFEYSIWGPTCDGIDRITDSTRFDPILDVGDWLYFEDMGAYTKCSAT 422

Query: 333 WFNGI 337
            FNG 
Sbjct: 423 QFNGF 427


>gi|167031923|ref|YP_001667154.1| ornithine decarboxylase [Pseudomonas putida GB-1]
 gi|166858411|gb|ABY96818.1| Ornithine decarboxylase [Pseudomonas putida GB-1]
          Length = 387

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 56/359 (15%), Positives = 120/359 (33%), Gaps = 26/359 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+ LID Q +    D      +    K+  A+K   A  + D L +       +S+YE
Sbjct: 25  ETPFVLIDTQMISQAYDDLRAGFEF--AKVYYAVKANPAVEIIDLLKEKGSSFDIASIYE 82

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +    +     +  +Y    K  +           ++ T S+ +  ++ A+         
Sbjct: 83  LDKVMDRGVSADRISYGNTIKKSKDIRYFYEKGVRLYATDSEAD-LRNIAKAAPGSKVYV 141

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179
              +   +        +   +        I +    +   G+ FH   + +    + A +
Sbjct: 142 RILTEGSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDAAI 201

Query: 180 KNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSVQI 229
             ++  F         +++ I++GGG                ++  + LKE       +I
Sbjct: 202 AKVKVIFERLKEEDGIELKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDELPEI 261

Query: 230 YLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
            LEPG +++ N   L + V+ ++        + +          +       +       
Sbjct: 262 ILEPGRSLIANAGILVSEVVLVARKSRTAVERWIYTDVGKFSGLIETMDEAIKFPIWTEK 321

Query: 285 TGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338
            G     ++ G +C + DI  E +       + IGDR+ +     Y  +     FNG  
Sbjct: 322 KGEAEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLYWLSTGAYTTSYSAVEFNGFP 380


>gi|320160946|ref|YP_004174170.1| diaminopimelate decarboxylase [Anaerolinea thermophila UNI-1]
 gi|319994799|dbj|BAJ63570.1| diaminopimelate decarboxylase [Anaerolinea thermophila UNI-1]
          Length = 431

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 57/390 (14%), Positives = 125/390 (32%), Gaps = 34/390 (8%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKN--AGVKLL-LALKCFAAWGMFDTLNQYMDGTTSSSL 60
           TP Y+ D   + +N+DT     K    G  ++  A K + +      + +   G  + S 
Sbjct: 36  TPLYIYDAHTIFHNIDTLKDTLKKYYPGESIITYAAKAYFSLRFAQFIAKTEVGIDAVSE 95

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK- 116
            E++         E    +   K          +N   I+ +    +   +  + K    
Sbjct: 96  NELIFALRAGIKPERIHLHGNNKTYAELDHAVQANIHAIVIDNFEDIEILERLSHKKSPI 155

Query: 117 KIGLRINPSVSYS-KFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
            + +R+NP +         +     S+ G   +D          + +    + G+  H  
Sbjct: 156 SVWIRVNPEIDEIATHPYRNTGHSVSKFGLTIRDGQAETAIRMLMANPNFRLIGIHTHIG 215

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEF 221
            +      +   +  + K           +  GGG     +        ++++ + +   
Sbjct: 216 SQIFDTAPYKQAIGEMLKLARRCNWIPAEVCPGGGWGVPYRHDEMINNNIENWIREISIV 275

Query: 222 SEK------YSVQIYLEPGEAIVTNTTTLNTTVLDISE--NIKNLVIVDSSVEAHVPDYL 273
            ++      +  ++ LEPG  IV        TV  + +  N + L+ VD  +  ++   L
Sbjct: 276 IQEEYRGSNFLPRLILEPGRWIVARAGIAIYTVGRVKQFSNGEKLLAVDGGMGDNIRPPL 335

Query: 274 LYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
              E   I       +      + GR C +GD          V+ G+ + F     Y+++
Sbjct: 336 YQAEYEAIVAENPLGSPTTCYRIVGRFCESGDELIHEIDLPEVQTGNHLIFPVSGAYHLS 395

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
             + +N    P +               + 
Sbjct: 396 MASNYNLFARPAVLWVENGSVNVLQERENL 425


>gi|332532720|ref|ZP_08408594.1| diaminopimelate decarboxylase [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332037747|gb|EGI74197.1| diaminopimelate decarboxylase [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 401

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 48/378 (12%), Positives = 113/378 (29%), Gaps = 27/378 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+++ D  +L  +L   +       VKL  A+K      +  +L+        +S  
Sbjct: 19  LDTPFFVYDLDQLNTHLARLV---AQTDVKLWYAVKANPLSKIIQSLDSAGFNFDVASKG 75

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+          +        K  +             +  +++Q+     +AQ  + ++
Sbjct: 76  ELEQVLAQGISSQRVLNTGPAKSPKQIKHFIERGVRIFVAESLNQVRWLNQQAQLQNTQL 135

Query: 119 GLRINPSVSYSKFILADPNRPF-SRLGEKCKD-----KIESEIKNVNGLMFH----NNCE 168
            + +   + + +           +  G  C +       +      +GL           
Sbjct: 136 QVLLRVQLRWPEGEKNPLGGDSLTPFGLGCDEWQALNVADYPALKFDGLHIFQWGNMLST 195

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSE 223
            K    +S M+  + +        ++ + LGGG+                     K  ++
Sbjct: 196 QKLSDLWSQMIAPLSQLASDLNISLKILDLGGGLGIPYTQNEATLDWDDLIAALAKIKND 255

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIY 282
               ++++E G   V         V++  +N     ++    +   +   +  Q+     
Sbjct: 256 AGVEELWMELGRYAVGECGHYANPVVERKQNYNQEQVILSGGINHLLRPAVTSQDFPAAL 315

Query: 283 PNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338
                       + G  C A D  GE +    +   D + F     Y        F    
Sbjct: 316 LRESSAKTQAVTLYGPLCTALDCLGEHNLPSDLNEHDWLVFSQCGAYGFTESMPYFLCHE 375

Query: 339 MPTIAVKNVDGTIKAIRE 356
           +        +GT+  +R+
Sbjct: 376 LAAEYTL-QNGTLTCVRQ 392


>gi|302308137|ref|NP_984947.2| AER087Cp [Ashbya gossypii ATCC 10895]
 gi|299789313|gb|AAS52771.2| AER087Cp [Ashbya gossypii ATCC 10895]
          Length = 450

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 52/368 (14%), Positives = 110/368 (29%), Gaps = 30/368 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++   L       +   V+   A+KC     + + L         +S  E+  
Sbjct: 81  FFVCDLGEVERLLRYWRR--ELPRVQPYYAVKCNPDVRVLERLASLGVNFDCASKAEIER 138

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             +     E   Y    K        +          +    +K        ++ LRI+ 
Sbjct: 139 VLQLGVAPERIIYANPCKVSSFIRFAAARGVRQSTFDNVEELYKIARFHPESQLLLRIST 198

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S ++  L+          +    K+     N+ G+ FH       F   +  + +  +
Sbjct: 199 DDSTAQCQLSAKYGCSPDEVDPLLAKVAELGLNLVGVSFHIGSGASDFSSLTQAVVDARR 258

Query: 185 EFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-YSVQIYLEPGEAIVT 239
            F       +  +  + +GGG  F             L         V++  EPG  +V 
Sbjct: 259 VFDRAAHFGLPALRVLDVGGGFQFDTFHQSSAILNAALDTHFPPGSGVELIAEPGRFLVA 318

Query: 240 NTTTLNTTVLD----------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN----- 284
              TL++ V+           +  N      ++  +  H          A  +       
Sbjct: 319 TAFTLSSHVIAKRELPERGSMLYINDGIYANMNCILFDHYQPTPRVLYHAAAFHYFDTTS 378

Query: 285 ------TGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGI 337
                   P+   + G +C   D   + ++ +  + +GD + F +   Y  +    FNG 
Sbjct: 379 SKSRTAACPHRTSIWGPTCDGLDCITDEYYLRYDLAVGDWLYFANFGAYTSSAATPFNGF 438

Query: 338 NMPTIAVK 345
                 + 
Sbjct: 439 EAAVEVIY 446


>gi|330967131|gb|EGH67391.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 402

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 61/377 (16%), Positives = 123/377 (32%), Gaps = 32/377 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            ++ D   L  ++   +     AGV+L  A+K  +   M +TL   + G   SS  E+  
Sbjct: 25  AFIYDLDALQQHVSEVMAALP-AGVELYYAIKANSEALMLETLAPLVSGFEISSGGEIER 83

Query: 66  GHEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQK--LHKKIGLR 121
                  + + ++     D ++ + L N    +   +++++ + +  A++    + + +R
Sbjct: 84  VMACPTRKPYVFSGPGKLDSDLRSALLNKVEAVHLESLNEIQRLQHLAEQTGRVQPVFIR 143

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENKSFLC 174
           INP +  ++          +  G    D  E+           + G   H      S   
Sbjct: 144 INPQLPAAQSSKLAMAGTATPFGIDEADLAEAVRLVDSATHLTLKGFHVHAMSHQMSVER 203

Query: 175 FSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKY 225
              +L    + +  +         +   ++GGGI       + +  +  C+ L++   + 
Sbjct: 204 HEQLLDFYLQRWQAWKALARHPEHLTHFNVGGGIGVDYLNSQQFDWQRLCRYLEKRLGEQ 263

Query: 226 SVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282
                L  EPG  I          VLD   +     +V                +   I+
Sbjct: 264 PDAPILRFEPGRFISAYCGYYVIEVLDSKSSHGEHFLVCRGGTHQFRLPVAQSHDHPVIH 323

Query: 283 PNTGPYT-------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WF 334
             + P T         V G+ C   D+       K V IGD +       Y  N  +  F
Sbjct: 324 LPSVPPTTASSEQAYTVVGQLCTPKDVLSRRQPFKDVNIGDLLVLPMAGAYGYNISHADF 383

Query: 335 NGINMPTIAVKNVDGTI 351
                P+         +
Sbjct: 384 LCHPRPSQHFVRNGERV 400


>gi|319761484|ref|YP_004125421.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Alicycliphilus denitrificans BC]
 gi|317116045|gb|ADU98533.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Alicycliphilus denitrificans BC]
          Length = 401

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 48/376 (12%), Positives = 101/376 (26%), Gaps = 34/376 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+Y  D+  +   +     +    GV L  A+K      +   +   +DG   +S  E
Sbjct: 27  QTPFYAYDRSLIAARVAGVRQVLPQ-GVHLHYAIKANPMPALVGFMRPLVDGMDVASAGE 85

Query: 63  VMLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           + L         T  +     +D E+   ++    +   +  +L      AQ L +   +
Sbjct: 86  LKLALDAGADPRTIGFAGPGKRDAELRQAVAAGVLLHAESARELEVLAASAQALGRSARV 145

Query: 121 RINPSVSYSKFILADPNRPFSR-LGEKCKD------KIESEIKNVNGLMFHNNCENKS-- 171
            +  +  +             +  G   +        +  +     G   +   +N    
Sbjct: 146 ALRINPDFELRGAGMHMGGGPKPFGIDAEQVPAMLRAMARDGLAFEGFHIYPGSQNLRGS 205

Query: 172 --FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKY 225
                    ++ + +        + +++LGGG         +   +      L +     
Sbjct: 206 VIAESLHRSVELVLRLAHDAPAPVRYVNLGGGWGIPYVAGEQRLDLAPVADALAQVQAAL 265

Query: 226 SV-----QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-------- 272
                  Q+ LE G  +V         V+D   +   + +V                   
Sbjct: 266 GRALPEAQMVLELGRYLVGEAGIYVARVIDRKVSRGQVFLVTDGGMHQHLAASGNFGQVI 325

Query: 273 --LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                             +A V G  C   D+  E       + GD +       Y    
Sbjct: 326 RRNYPVVIGNRLQAAERESATVVGPLCTPLDVLAERMELAVAQPGDLVVVLQSGAYGATA 385

Query: 331 KNW-FNGINMPTIAVK 345
               F G       + 
Sbjct: 386 SPQAFLGHPPCAEVLV 401


>gi|302524721|ref|ZP_07277063.1| orn/DAP/Arg decarboxylase 2 [Streptomyces sp. AA4]
 gi|302433616|gb|EFL05432.1| orn/DAP/Arg decarboxylase 2 [Streptomyces sp. AA4]
          Length = 502

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 47/372 (12%), Positives = 115/372 (30%), Gaps = 30/372 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP  ++D   +  +      +      ++  A+K   A  +   + Q   G   +   E
Sbjct: 18  PTPCLVVDLDVVRGSCARLRAVLPE--ARMYYAVKANPAPEVVRVVRQAGAGFDVAGREE 75

Query: 63  VMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + L        E+ +Y            A         F++   L K  + A        
Sbjct: 76  IELCLAQGVRPESLSYGNPVKKARDIEFAHRVGVRRFTFDSREDLEKLAEFAPGATVSCR 135

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV--NGLMFHNNCENKSFLCFSA 177
           + +         +     +         +  + +    +   G+ FH   ++     + A
Sbjct: 136 ILV----DSPGALTPFGRKFGCDPAMAAELLVRAAELGLDPEGIAFHVGSQHVDPRAWEA 191

Query: 178 MLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPV--KDFCQRLKEFSEKYS---VQI 229
            +     + +        +  +++GGG        P   +++   +++   ++     ++
Sbjct: 192 GIAAAGEVTRAVAQRGVSLRGLNIGGGFPVGYLTEPPSLEEYAAVIRDAVGRHFAVAPEL 251

Query: 230 YLEPGEAIVTNTTTLNTTVLDISE----NIKNLVIVDSSVEAHVPDYLL--YQESATIYP 283
             EPG A+V +   + + V+ +S     + K  V +D      + +              
Sbjct: 252 SFEPGRAVVASAGVIRSEVVLVSRKSAADEKRWVYLDIGRYGGLAETENEAIAYRLVTAH 311

Query: 284 NTGPY-TAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338
           + GP    +V G +C   D+  +   +     ++ GD +       Y  +  +  FNG  
Sbjct: 312 DGGPDGPVVVAGPTCDGDDVLYQRTPYRLPLALRAGDYVDIPHAGAYTQSYSSVSFNGFP 371

Query: 339 MPTIAVKNVDGT 350
                    +  
Sbjct: 372 PLRAYFIGGESA 383


>gi|17548645|ref|NP_521985.1| diaminopimelate decarboxylase protein [Ralstonia solanacearum
           GMI1000]
 gi|17430893|emb|CAD17575.1| probable staphyloferrin b siderophore synthesis decarboxylase
           protein [Ralstonia solanacearum GMI1000]
          Length = 413

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 56/377 (14%), Positives = 102/377 (27%), Gaps = 42/377 (11%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            YL D   L              G +L  A+K  +   +   L+  + G   +SL EV+ 
Sbjct: 19  AYLYDLDHLRERAARL-SAMLPPGCELFYAIKANSDAPVLAALDGAVAGYEVASLGEVVR 77

Query: 66  GHEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
             E        +       D    A+    + I   +  QL +    A ++ ++  + + 
Sbjct: 78  AREVGAQARIVFGGPGKTDDELQGALERGVELIHVESELQLRRLDAIACRMGRRARVLLR 137

Query: 124 PSVS---------------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE 168
            + +                              + +  +         V GL  H    
Sbjct: 138 VNPNPLSADAVGKRAQGTLTMGGQPTQFGIEEDAVPDLIRLARTLPGVEVVGLHLHALSN 197

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKE 220
           N             L    +        ++ +++GGGI          +  + FC  L  
Sbjct: 198 NLDADSHLALMRHYLSLALRLRREHGLTLDTLNVGGGIGVDYADPSHAFDWRRFCDGLGV 257

Query: 221 FSEK--YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQE 277
              +     +I  E G  I  +     T V+D+  N      V      H          
Sbjct: 258 LLAEAGAGCRIVFECGRFIAADCGYYVTEVVDLKRNHGRWFAVLRGGTHHFRLPASWQHN 317

Query: 278 SATIYPNTGPYTAM------------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
                     +               +CG  C   D+         +++GDRI F+    
Sbjct: 318 HPFAILPNARWDYPFERPSVLAQAVTLCGELCTPKDVLARDVVVDRLRVGDRIVFQLAGA 377

Query: 326 YNINRKNW-FNGINMPT 341
           Y  +  +  F     P 
Sbjct: 378 YGWHISHHDFLSHPHPE 394


>gi|26987600|ref|NP_743025.1| ornithine decarboxylase [Pseudomonas putida KT2440]
 gi|24982277|gb|AAN66489.1|AE016277_8 ornithine decarboxylase, putative [Pseudomonas putida KT2440]
          Length = 371

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 56/359 (15%), Positives = 119/359 (33%), Gaps = 26/359 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+ LID Q +    D      +    K+  A+K   A  + D L +       +S+YE
Sbjct: 9   ETPFVLIDTQMISQAYDDLRAGFEF--AKVYYAVKANPAVEIIDLLKEKGSSFDIASIYE 66

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +          +  +Y    K  +           ++ T S+ +  ++ A+         
Sbjct: 67  LDKVMGRGVSADRISYGNTIKKSKDIRYFYEKGVRLYATDSEAD-LRNIAKAAPGSKVYV 125

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179
              +   +        +   +        I +    +   G+ FH   + +    + A +
Sbjct: 126 RILTEGSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDAAI 185

Query: 180 KNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSVQI 229
             ++  F         +++ I++GGG                ++  + LKE       +I
Sbjct: 186 AKVKVIFERLKEEDGIELKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDELPEI 245

Query: 230 YLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
            LEPG +++ N   L + V+ ++        + +          +       +       
Sbjct: 246 ILEPGRSLIANAGILVSEVVLVARKSRTAVERWIYTDVGKFSGLIETMDEAIKFPIWTEK 305

Query: 285 TGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338
            G     ++ G +C + DI  E +       + IGDR+ +     Y  +     FNG  
Sbjct: 306 KGEAEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLYWLSTGAYTTSYSAVEFNGFP 364


>gi|170700579|ref|ZP_02891580.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Burkholderia ambifaria IOP40-10]
 gi|170134527|gb|EDT02854.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Burkholderia ambifaria IOP40-10]
          Length = 402

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 46/375 (12%), Positives = 96/375 (25%), Gaps = 34/375 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TPY+  D+  +   +          GV L  ++K      +   L+  +DG   +S  E+
Sbjct: 29  TPYFAYDRAAIDARVLALRDALP-PGVLLHYSIKANPMPAVVHHLSTRIDGFDVASATEL 87

Query: 64  MLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            L        +   +        E+   +++   +   +++QL+       +L  +  + 
Sbjct: 88  ALALDAGMPADQIGFAGPGKGSDELRRAVASGVNVHVESLTQLHLVTALGWELGVQPNIA 147

Query: 122 INPSVSYSKFILADPNRPF-SRLGEKCKDK------IESEIKNVNGLMFHNNCENKS--- 171
           I  +  +             +  G   +        +E+    + G       +      
Sbjct: 148 IRINPDFHVDRSGMRMGGGAAAFGVDLEQVPALLRELEARDATLAGFHVFWGSQCLHAPT 207

Query: 172 -FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI- 229
                      + K          +++LGGG                + +    +  Q  
Sbjct: 208 VIQAQRQSADLVMKLAADRSVAPRFVNLGGGFGIPYFPGETPLDVGAVTDAMRSWLPQFT 267

Query: 230 --------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
                    LE G  +V         V+D   +   + +V      H             
Sbjct: 268 ENLPGTRLILELGRYLVGEAGIYVCRVIDRKVSRGKMFLVTDGGLHHHLAASGNFGQVLR 327

Query: 282 YPNT----------GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                               + G  C   D   E        IGD +       Y  +  
Sbjct: 328 RNFPVLLGNRLGEAPRERCQIVGCLCTPLDRIAEDVPLPDAHIGDLVVVLQSGAYGRSAS 387

Query: 332 -NWFNGINMPTIAVK 345
            + F G       + 
Sbjct: 388 PSRFLGHPDAIEMLV 402


>gi|300696992|ref|YP_003747653.1| diaminopimelate decarboxylase protein (lysA) [Ralstonia
           solanacearum CFBP2957]
 gi|299073716|emb|CBJ53236.1| putative diaminopimelate decarboxylase protein (lysA) [Ralstonia
           solanacearum CFBP2957]
          Length = 413

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 61/392 (15%), Positives = 105/392 (26%), Gaps = 45/392 (11%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            YL D   L              G +L  A+K  +   +   L+  + G   +SL EV+ 
Sbjct: 19  AYLYDLDHLRERAGRL-SAMLPPGCELFYAIKANSDAPVLAALDGAVAGYEVASLGEVVR 77

Query: 66  GHEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
             E        +    K       A+    + I   +  QL +    A ++ +   + + 
Sbjct: 78  AREVSAHARIVFGGPGKTDAELQGALERGIELIHVESELQLRRLDAVACRMGRCARVLLR 137

Query: 124 PSVS---------------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE 168
            + +                              + +  +         V GL  H    
Sbjct: 138 VNPNPLSADSAGKRPQGTLTMGGQPTQFGIEEDAVPDLIRLARGLAGVEVVGLHLHALSN 197

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
           N             L    +        ++ +++GGGI             +R  +    
Sbjct: 198 NLDADSHLALMRHYLALALRLRREHGLTLDTLNVGGGIGVDYAQPSHAFDWRRFCDGLGA 257

Query: 225 Y------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQE 277
                    +I  E G  I  +     T V+DI  N      V      H          
Sbjct: 258 LLAEAGAGCRIVFECGRFITADCGYYVTEVVDIKRNHGKWFAVLRGGTHHFRLPASWQHN 317

Query: 278 SATIYPNTGPYTAM------------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
                     +T              +CG  C   D+         + +GDRI F+    
Sbjct: 318 HPFAIVPNAQWTYPFARPSVQAQAVTLCGELCTPKDVLARDVVVDRLSVGDRIVFQLAGA 377

Query: 326 YNINRKNW-FNGINMPTIAVKNVDGTIKAIRE 356
           Y  +  +  F     P        GT+ A+RE
Sbjct: 378 YGWHISHHDFLSHPHPERRFV---GTLNAVRE 406


>gi|224368132|ref|YP_002602295.1| decarboxylase family protein [Desulfobacterium autotrophicum HRM2]
 gi|223690848|gb|ACN14131.1| decarboxylase family protein [Desulfobacterium autotrophicum HRM2]
          Length = 387

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 51/366 (13%), Positives = 119/366 (32%), Gaps = 26/366 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP+ +ID   +   L+  + +       +  A+K   A  +   +         +S+YE
Sbjct: 25  DTPFLVIDTATVERRLEQLINVFPY--ASIYYAVKANPAIEILTMMRDKNVNFDIASIYE 82

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +          +  ++    K  +           ++ T S+ +  ++ A+         
Sbjct: 83  LDRVLSLGISPDRISFGNTIKKSKDVRYFYEKGVRMYATDSEAD-IRNIARAAPGSRIYV 141

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179
              +            +   +L       I ++   +   G+ FH   + +    + A +
Sbjct: 142 RILTEGTLTADWPLSRKFGCQLDMAMDLIILAKDLGLIPYGISFHVGSQQREIGAWDAAI 201

Query: 180 KNIEKEFG----HFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYS----VQI 229
             ++  F          ++ I+LGGG       K   ++ + Q +  F  +       QI
Sbjct: 202 GKVKGIFDRLEQEDDINLQMINLGGGFPANYLSKANDLETYGQEITRFLTESFGDDLPQI 261

Query: 230 YLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
            LEPG +++ +   + T V+ I+        + + +        +       +       
Sbjct: 262 ILEPGRSLIADAGVMVTEVVLIARKSRTALHRWVYLDVGKFSGLIETMDESIKYPIFTGK 321

Query: 285 TGP-YTAMVCGRSCLAGDIF---GEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINM 339
            G     ++ G +C + DI     ++     + I DR+ +     Y  +     FNG   
Sbjct: 322 KGEVEEVVLAGPTCDSADILYENYKYKLPLNLAISDRVYWLSTGAYTSSYSAVEFNGFPP 381

Query: 340 PTIAVK 345
             +   
Sbjct: 382 LAVYFI 387


>gi|154275626|ref|XP_001538664.1| ornithine decarboxylase [Ajellomyces capsulatus NAm1]
 gi|150415104|gb|EDN10466.1| ornithine decarboxylase [Ajellomyces capsulatus NAm1]
          Length = 446

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 56/360 (15%), Positives = 102/360 (28%), Gaps = 32/360 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y+ D  ++               VK   A+KC     +   +    +G   +S  E+ 
Sbjct: 69  PFYIADLGQVYRQHVRWKKNLGR--VKPFYAVKCNPDPQVLRLMANLGNGFDCASKAEID 126

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                        Y    K        S          +    +K K      ++ LRI 
Sbjct: 127 CALGAGVDPSRIIYAQPCKTKSYLRYASQVGVKQMTFDNSDELYKIKEMCPEAELYLRIL 186

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S S   L+        +     +  +    NV G+ FH     +    F   +++  
Sbjct: 187 TDDSASLCRLSMKFGASLSITRSLLELAKELKLNVIGVSFHVGSGAEDPRSFVKAVEDSR 246

Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
             F         ++ + +GGG      +         L E    + +++  EPG   V +
Sbjct: 247 YVFDQAAEVGFDLKVLDVGGGFSEDTFERFASTLGDALDEHFPPH-IRVIAEPGRYYVAS 305

Query: 241 TTTLNTTVLD----------------------ISENIKNLVIVDSSVEAHVPDYLLYQES 278
             TL   V+                       I  N        + +  H          
Sbjct: 306 AFTLAANVIARRDVSLEMSDSDSTSSATEAYMIYLNDGVYGNFSNIIFDHQHPVPQILTM 365

Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGI 337
            +      P    + G +C   D+  +       + IG+ + FE++  Y       FNG 
Sbjct: 366 ESPVC--TPIEYSIWGPTCDGIDLITQRITLPGALDIGNWLYFENMGAYTKCSATCFNGF 423


>gi|89069157|ref|ZP_01156530.1| decarboxylase, pyridoxal-dependent [Oceanicola granulosus HTCC2516]
 gi|89045330|gb|EAR51396.1| decarboxylase, pyridoxal-dependent [Oceanicola granulosus HTCC2516]
          Length = 396

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 46/364 (12%), Positives = 99/364 (27%), Gaps = 28/364 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D  ++                 +  A+K   A  +   L        ++S  E+ 
Sbjct: 38  PTLVVDLDRVEQQYRALSAGLGR--ATIHYAVKANPAEEVIARLVALGSHFDAASRGEIA 95

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIGLR 121
           L           ++    K     A   +        ++  +L K  + A      I L 
Sbjct: 96  LCLAQGARPRDISFGNTIKKPSDIAWAWDRGITLFAADSEEELEKIAEHAPGARVYIRLI 155

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +    S + + L       +    +  D          G  FH   + +    +   L  
Sbjct: 156 V--ETSEADWPLTRKFGCDASKALELLDYATDLSLEPVGFSFHVGSQTRRAEMWIPALDA 213

Query: 182 ---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR-------------LKEFSEKY 225
                +       ++  +++GGG      +                      +     + 
Sbjct: 214 LAATWRAAQAAGHELSVLNIGGGFPAFYGEEIEAPEAYARAVMGLVTERFGEVAHIMAEP 273

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285
              +  E G  +         +  D+   +   +   S +     + + YQ   T   + 
Sbjct: 274 GRGMVAEAGTIVAETMLVSRKSDRDVHRWVYLDIGRFSGLAETEGEAIRYQL-ETGRDHE 332

Query: 286 GPYTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPT 341
                ++ G SC + D+  E         +K GDR+   +   Y     +  FNG     
Sbjct: 333 AMGPCILAGPSCDSADVLYEKRPVMLPLGLKSGDRVLIRNTGAYTSTYSSVGFNGFPPLD 392

Query: 342 IAVK 345
           +   
Sbjct: 393 VVCI 396


>gi|269129052|ref|YP_003302422.1| Orn/DAP/Arg decarboxylase 2 [Thermomonospora curvata DSM 43183]
 gi|268314010|gb|ACZ00385.1| Orn/DAP/Arg decarboxylase 2 [Thermomonospora curvata DSM 43183]
          Length = 373

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 50/355 (14%), Positives = 108/355 (30%), Gaps = 21/355 (5%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D   L  ++          G +L  A K      +  T+  Y+DG   +S  E+ 
Sbjct: 14  PAFVYDLGALREHVAAIRKALTG-GPELFYAAKANPDAEILKTVAPYVDGIEVASGGELK 72

Query: 65  LGHEKFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                      A+      D E+   +   + +   +  +L++     + +   + + + 
Sbjct: 73  HVRAVLPKARLAFGGPGKTDEELALAVREAERVHVESPHELSRLARIGRDVDVLLRVNLA 132

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIE-SEIKNVNGLMFHNNCENKS---FLCFSAML 179
                    ++ P        E C + +  +    + G+  H     ++         +L
Sbjct: 133 GERKGVALAMSGPFGMDPEAIEACHEILAGAPWVRLRGIHAHLASGLEAEALVRQSEEIL 192

Query: 180 KNIEKEFGHFIT-QIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
           +            Q    +LGGG+        + +    + +++   ++   +    EPG
Sbjct: 193 QWARPWLEKTGCTQNPEFNLGGGMAVDYTDPHRRFDWTTYGRQIAALAQPGEILRI-EPG 251

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPNTGPY----- 288
            A+        T VLD+ +       V      H+                 G       
Sbjct: 252 RAVTVYAGWYVTQVLDVKKAHGQWYAVLRGGTHHIRTPVTKNHNQPFTVLPRGEQGPAVN 311

Query: 289 --TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGINMP 340
                + G+ C   D+F        + +GD ++F     Y  N  +  F     P
Sbjct: 312 GAEVTLVGQLCTPKDVFARQVPVDRIAVGDVVAFSMAGAYAWNISHHDFLMHPKP 366


>gi|330879043|gb|EGH13192.1| diaminopimelate decarboxylase [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 402

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 60/376 (15%), Positives = 121/376 (32%), Gaps = 32/376 (8%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66
           ++ D   L  ++   +     AGV+L  A+K  +   M +TL   + G   SS  E+   
Sbjct: 26  FIYDLDALQQHVSEVMAALP-AGVELYYAIKANSEALMLETLAPLVSGFEISSGGEIERV 84

Query: 67  HEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQK--LHKKIGLRI 122
                 + + ++     D ++ + L N    +   +++++ + +  A++    + + +RI
Sbjct: 85  MACPTRKPYVFSGPGKLDSDLRSALLNKVEAVHLESLNEIQRLQHLAEQTGRVQPVFIRI 144

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENKSFLCF 175
           NP +  ++          +  G    D  E+           + G   H      S    
Sbjct: 145 NPQLPAAQSSKLAMAGTATPFGIDEADLAEAVRLVDSATHLTLKGFHVHAMSHQMSVERH 204

Query: 176 SAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKYS 226
             +L    + +  +         +   ++GGGI       + +  +  C+ L++   +  
Sbjct: 205 EQLLDFYLQRWQAWKALARYPEHLTHFNVGGGIGVDYLNTQQFDWQRLCRYLEKRLGEQP 264

Query: 227 VQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYP 283
               L  EPG  I          VLD   +     +V                +   I+ 
Sbjct: 265 DAPILRFEPGRFISAYCGYYVIEVLDRKTSHGEHFLVCRGGTHQFRLPVAQSHDHPVIHL 324

Query: 284 NTGPYT-------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFN 335
            + P T         V G+ C   D+         V IGD +       Y  N  +  F 
Sbjct: 325 PSVPPTAASSEQAYTVVGQLCTPKDVLSRRQPFSGVNIGDLLVLPMAGAYGYNISHADFL 384

Query: 336 GINMPTIAVKNVDGTI 351
               P          +
Sbjct: 385 CHPRPPQHFVRNGERV 400


>gi|148546138|ref|YP_001266240.1| ornithine decarboxylase [Pseudomonas putida F1]
 gi|148510196|gb|ABQ77056.1| ornithine decarboxylase [Pseudomonas putida F1]
 gi|313497233|gb|ADR58599.1| Ornithine decarboxylase [Pseudomonas putida BIRD-1]
          Length = 387

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 56/359 (15%), Positives = 119/359 (33%), Gaps = 26/359 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+ LID Q +    D      +    K+  A+K   A  + D L +       +S+YE
Sbjct: 25  ETPFVLIDTQMISQAYDDLRAGFEF--AKVYYAVKANPAVEIIDLLKEKGSSFDIASIYE 82

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +          +  +Y    K  +           ++ T S+ +  ++ A+         
Sbjct: 83  LDKVMGRGVSADRISYGNTIKKSKDIRYFYEKGVRLYATDSEAD-LRNIAKAAPGSKVYV 141

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179
              +   +        +   +        I +    +   G+ FH   + +    + A +
Sbjct: 142 RILTEGSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDAAI 201

Query: 180 KNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSVQI 229
             ++  F         +++ I++GGG                ++  + LKE       +I
Sbjct: 202 AKVKVIFERLKEEDGIELKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDELPEI 261

Query: 230 YLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
            LEPG +++ N   L + V+ ++        + +          +       +       
Sbjct: 262 ILEPGRSLIANAGILVSEVVLVARKSRTAVERWIYTDVGKFSGLIETMDEAIKFPIWTEK 321

Query: 285 TGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338
            G     ++ G +C + DI  E +       + IGDR+ +     Y  +     FNG  
Sbjct: 322 KGEAEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLYWLSTGAYTTSYSAVEFNGFP 380


>gi|149195262|ref|ZP_01872351.1| Orn/DAP/Arg decarboxylase, family 2 [Caminibacter mediatlanticus
           TB-2]
 gi|149134604|gb|EDM23091.1| Orn/DAP/Arg decarboxylase, family 2 [Caminibacter mediatlanticus
           TB-2]
          Length = 443

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 58/394 (14%), Positives = 129/394 (32%), Gaps = 33/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P ++  ++ + N           +   V+   + K      +    ++        S 
Sbjct: 44  GSPLFVFSERDIENKYLEFKEAFSSRYPDVEFWWSYKTNYLGAICKVFHKLGSKAEVVSE 103

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKI 118
           +E          G+   +N  YK  E   V       I  +   ++N  ++ A KL   I
Sbjct: 104 FEYQKARHLGIDGKDIIFNGPYKSKEALEVAVKEGAKIHIDHWDEINDLEEIADKLGVNI 163

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
            + I  +++   + L      F+    +  D I+   +     +   +    +F+  +  
Sbjct: 164 PVAIRCNMNTGVYPLWSRFG-FNIDNNEAYDAIKRIYEGKKLYLIGLHTHIGTFMLSADA 222

Query: 179 LKNIEKEF--------GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS---- 226
            +   K+           F   IE++ LGGG    ++   V    + +    + Y+    
Sbjct: 223 YRVAAKKLTELKNRVEEEFGFNIEYLDLGGGFASKNRLKGVYQPPEVIVPTPDDYAIAIT 282

Query: 227 -----------VQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLL 274
                       ++YLE G A++     L T+V          +  +  +    +     
Sbjct: 283 DTIYATNKGNLPKLYLETGRALIDEAGYLLTSVFASKRLPDGKVSYILDAGVNLLYTSFW 342

Query: 275 YQESATI--YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
           Y     +    +     +++ G  C+  D+  +  +  P+  GD ++   V  YN+ +  
Sbjct: 343 YNFDIFLSKKYDDISELSILNGPLCMNIDVIADNIYLPPLNRGDVVTIAPVGAYNVTQWM 402

Query: 333 WFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNN 365
            F     P + + + +     IRE     D    
Sbjct: 403 QFIRY-RPAVVLIDKNSNPHLIREKEDLEDIIKR 435


>gi|301119039|ref|XP_002907247.1| ornithine decarboxylase 1 [Phytophthora infestans T30-4]
 gi|262105759|gb|EEY63811.1| ornithine decarboxylase 1 [Phytophthora infestans T30-4]
          Length = 481

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 61/385 (15%), Positives = 112/385 (29%), Gaps = 49/385 (12%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y++D   + +             V+   A+KC     + + L +   G   +S  E+  
Sbjct: 93  FYVVDTAAVEDRFKLWNQYLPE--VRPYYAVKCNPDPALIEGLARLGAGFDCASQTEISS 150

Query: 66  GHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                       Y    K       A  +  D + F++  +L K           + L +
Sbjct: 151 VLGNGVSASDIIYANPCKQGSQITYAHANGVDMMTFDSQEELTKIHSINPSAKLVLRLYV 210

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIE---SEIKNVNGLMFHNNCENKSFLCFSAML 179
           + S S     +      F  +     D +    +   +V G+ FH      +   +S  +
Sbjct: 211 DDSNS-----ICRLGTKFGAMVHDVPDILNHAKALNLDVVGVSFHVGSGCFNVEAYSDAV 265

Query: 180 KNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQR------LKEFSEKYSVQIY 230
               K F            + +GGG   T+      + C           F    +V++ 
Sbjct: 266 ALARKVFDIGHSQGFNFSLLDIGGGFPGTENAPIRFEDCALELKKSLAVHFPRSSNVKVI 325

Query: 231 LEPGEAIVTNTTTLNTTVLDI-----------------------SENIKNLVIVDSSVEA 267
            EPG     +T TL   V+                         +        + +S   
Sbjct: 326 SEPGRFFAASTHTLAVNVIGRKVAPTFDIPGQPPVLASAAGPTPNYMYFVNDGLYASFNC 385

Query: 268 HVPDYLLYQESATIYPNTGPYTAM----VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323
            V D+   Q        +   T M    + G +C   D   +      + IG  I F  +
Sbjct: 386 MVYDHPSIQPVIMSDTASPSATQMFKASLWGPTCDGMDCIMKEVEMPLMDIGQWILFPSM 445

Query: 324 AGYNINRKNWFNGINMPTIAVKNVD 348
             Y     + FNG   P     + +
Sbjct: 446 GAYTCAAGSDFNGFQRPQKIYFDSN 470


>gi|310643688|ref|YP_003948446.1| orn/dap/arg decarboxylase 2 [Paenibacillus polymyxa SC2]
 gi|309248638|gb|ADO58205.1| Orn/DAP/Arg decarboxylase 2 [Paenibacillus polymyxa SC2]
          Length = 425

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 65/391 (16%), Positives = 126/391 (32%), Gaps = 39/391 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP+Y  D   L  ++ + L  R +  V++  ALK      +   L     G   +S  E
Sbjct: 16  PTPFYYYDGDALHAHVSSLL-ARLHPAVRVHYALKANGNVPLAGLLRSLGCGVEIASAGE 74

Query: 63  VMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + +  E  +  E   Y    K      +A+      I   +V +L   +D A +    + 
Sbjct: 75  MFVAMEAGYAAEDVLYAGPGKTIAELREAITCGIGCIHVESVRELRLLEDIAAQTGVFVR 134

Query: 120 LRIN----PSVSYSKFILADPNRPFSRLGEKCKDK--IESEIKNVNGLMFHNNCENKSFL 173
             +       +S +   +    RPF     +      +  +  +V           +   
Sbjct: 135 AAVRINPDNDLSGATIKMGGVPRPFGVDEGQLDHFFKVLEDCPHVYFQGIQVYTGTQMLK 194

Query: 174 ------CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSE 223
                  F+  L+  E+    +   +  I+LGGG       +     +      L   +E
Sbjct: 195 ADQILASFANTLQLAERVQAQYSVAMHTINLGGGFGVPYFAHEQPLDMDHVIDGLNALAE 254

Query: 224 KYSVQI-----YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH---------- 268
           +   ++      +E G  +V  +       L   ++     +V      H          
Sbjct: 255 QTRSRMPGVRLIIESGRYLVAQSGMYVCRALYTKKSKGEKFVVADGGMNHYVAATFRGRR 314

Query: 269 VPDYLLYQ--ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
           + D    +     +   +T   T  + G  C   D   +     P++ GD I+F +   Y
Sbjct: 315 LRDNYPVRIMRRQSAEVSTELETVSIVGPLCTPEDCIVKKAELPPIQEGDYIAFPNAGAY 374

Query: 327 NINRKNW-FNGINMPTIAVKNVDGTIKAIRE 356
            ++     F G   P   + +  G +  IRE
Sbjct: 375 GLSYSPLYFLGHATPAE-LLDYRGKVHIIRE 404


>gi|329895688|ref|ZP_08271111.1| Diaminopimelate decarboxylase [gamma proteobacterium IMCC3088]
 gi|328922206|gb|EGG29560.1| Diaminopimelate decarboxylase [gamma proteobacterium IMCC3088]
          Length = 315

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 53/304 (17%), Positives = 102/304 (33%), Gaps = 21/304 (6%)

Query: 81  YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNR 138
            ++  + A+ +        +V++L    + AQ+L     + LR+NP V            
Sbjct: 8   KREEMVAALEAGIHCFNVESVAELELLAEVAQELGKEAPVSLRVNPDVDAKTHPYISTGL 67

Query: 139 PFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGH 188
             ++ G   +   ++           V G+  H   +      F   L    ++      
Sbjct: 68  AENKFGISMEHAYQAYAFVHATEGLRVIGIDCHIGSQLTELAPFKDALDRVLDLVDRLRE 127

Query: 189 FITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLN 245
               +E +  GGG+    KD     + D+ + LK       + + LEPG +IV N  TL 
Sbjct: 128 AGIVLEHVDAGGGLGVRYKDETPPDITDYVRALKGPLAARGLGLMLEPGRSIVANAGTLI 187

Query: 246 TTVLDISENIKNLVI-VDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAG 300
           T V  +    K+    VD+++   +   L           +  +       + G  C  G
Sbjct: 188 TQVDFLKTTEKHNFALVDAAMNDLLRPALYQAWMDIKPLEVNSDVTEKAWNIVGPVCETG 247

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           D  G+      +  GDR++      Y     + +N        + + D         +  
Sbjct: 248 DFLGKDRRLA-LSAGDRLAVLGAGAYGFVMASNYNTRPRAAEIMIDGDQMHLVRERETVA 306

Query: 361 DYYN 364
           D + 
Sbjct: 307 DLFK 310


>gi|320159270|ref|YP_004191648.1| ornithine decarboxylase/Arginine decarboxylase [Vibrio vulnificus
           MO6-24/O]
 gi|319934582|gb|ADV89445.1| ornithine decarboxylase / Arginine decarboxylase [Vibrio vulnificus
           MO6-24/O]
          Length = 399

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 59/357 (16%), Positives = 104/357 (29%), Gaps = 17/357 (4%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  L+D   +               V L  ALK      +  TL         ++  EV 
Sbjct: 36  PLLLLDCDVIRQQYRALKNAL--PNVTLHYALKPLPHPVVVRTLLAEGASFDLATTGEVE 93

Query: 65  L-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           L   E    E   +    K              +F   +     K KA     ++ +R++
Sbjct: 94  LVASEGVPAELTIHTHPIKRDADIRDALAYGCNVFVVDNLNELEKFKAYCDEVELLVRLS 153

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE----NKSFLCFSAML 179
              S +   L+              +  +     + GL FH   +    NK         
Sbjct: 154 FRNSEAFADLSKKFGCSPEQALVIIETAKEWNIRIKGLSFHVGSQTTNPNKYVEAIHTCR 213

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYSVQIYL--EPGE 235
             +E+     +  +  + +GGG       +  P+  FC  + E        +++  EPG 
Sbjct: 214 HVMEQVVERGLPALSTLDIGGGFPVNYTQQVMPIDQFCVPINEALSLLPETVHVLAEPGR 273

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGPYTA 290
            I     T   +V+  +E    +          S    + D   Y    TI        +
Sbjct: 274 FICAPAVTSVASVMGQAEREGQIWYYLDDGIYGSFSGLMFDDARYPL-TTIKQGGELLPS 332

Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
           ++ G +C + D+  E      +  GD +    +  Y       FN          N 
Sbjct: 333 VLSGPTCDSVDVIAENILLPKLNNGDLVIGRTMGAYTSATATDFNFFKRAQTIALNE 389


>gi|160902007|ref|YP_001567588.1| Orn/DAP/Arg decarboxylase 2 [Petrotoga mobilis SJ95]
 gi|160359651|gb|ABX31265.1| Orn/DAP/Arg decarboxylase 2 [Petrotoga mobilis SJ95]
          Length = 390

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 50/366 (13%), Positives = 117/366 (31%), Gaps = 26/366 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TP+ ++D   +  N            V++  A+K  +   + +TL         +S  
Sbjct: 14  LETPFLVLDTNYVKENYYKLKNSIN--DVEIFYAVKANSHPSILETLRDLGASFDVASRG 71

Query: 62  EV-MLGHEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+  L       +  ++      +     A  +  +    +   ++ K    A       
Sbjct: 72  EIEKLMRLGISTDKMSFGNTIKKEKDIKFAWDNGVEYFAVDAEMEVEKIARNAPGAKVYG 131

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFS 176
            L ++ + S               +         ++ K +   G+ FH   ++ +   + 
Sbjct: 132 RLSMSSNDSDWPLSGKFGTDVDHLIEI----LKYAKRKGLIPYGVSFHVGSQSYNKYKWK 187

Query: 177 AMLKNIEKEFG---HFITQIEWISLGGGIH--FTDKDYPVKDFCQRLKEFSEKYSV---- 227
             + N  + F         ++ ++LGGGI    T     V++  + + E  ++Y      
Sbjct: 188 EAILNASEVFEKLHKQKIDLKMLNLGGGIPVKHTKPVPEVEEIGEVINESIKEYLGWVDG 247

Query: 228 -QIYLEPGEAIVTNTTTLNTTVL--DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
            ++  EPG ++V N   + + VL          + +        +     ++    +   
Sbjct: 248 LRVLSEPGRSMVGNAGIIASRVLLRGRKGTQNWVFLDTGVFHGLMETIENFRYEVLVEGK 307

Query: 285 TGPY--TAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                 T  + G +C + D   +       +   D + F +   Y       FNGI    
Sbjct: 308 EYSETTTMTLAGPTCDSVDTIYDEIELPIDIDYNDIVYFINTGAYTNEYATSFNGIEPLK 367

Query: 342 IAVKNV 347
           +     
Sbjct: 368 VYTVED 373


>gi|120612446|ref|YP_972124.1| Orn/DAP/Arg decarboxylase 2 [Acidovorax citrulli AAC00-1]
 gi|120590910|gb|ABM34350.1| Orn/DAP/Arg decarboxylase 2 [Acidovorax citrulli AAC00-1]
          Length = 404

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 46/376 (12%), Positives = 106/376 (28%), Gaps = 36/376 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP++  D+ KL   +           +++  ++K      +   +   +DG   +S  E+
Sbjct: 31  TPFFAYDRSKLAERVALLRRWLA-PDIRIHYSIKANPMPALVHCMAGLVDGFDVASAGEL 89

Query: 64  MLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIG 119
            +  +     E  A       + ++ + +    T+   +V QL+       A  +  ++ 
Sbjct: 90  RVALDTGMAAEHIALAGPGKTELDVRSTVGAGATLTLESVHQLDAAARAGQALGVRPRVA 149

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKSFL 173
           LRINP        +     P  + G   +        I     +  G       +     
Sbjct: 150 LRINPDFQPKTSGMRMGGGP-RQFGIDAEQAPGVLAAIAQRDLDFRGFHVFWGSQCLDAD 208

Query: 174 C----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSEKY 225
                   + + + +        + ++++GGG      +      ++     ++++    
Sbjct: 209 TVISAQRHVAELVVRLADQANAPVAFVNMGGGFGIPYFENERALDLEPIGAAMRQWLVPL 268

Query: 226 SV-----QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-------- 272
                  ++ +E G  +V         +LD   +     +V      H            
Sbjct: 269 RQRLPEARLAMEFGRYLVGEAGIYVCRILDKKVSRGETFLVTDGGLHHQLAASGNFGQVL 328

Query: 273 --LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                             T  + G  C   D   +        IGD +       Y  + 
Sbjct: 329 RRNYPVAIGNKSGLPATETCHIVGCLCTPLDRIADRVALASPDIGDFVVVAQSGAYGRSA 388

Query: 331 KN-WFNGINMPTIAVK 345
               F     P   + 
Sbjct: 389 SPAAFLSHPEPAEILV 404


>gi|213966727|ref|ZP_03394878.1| decarboxylase, ornithine/DAP/arginine decarboxylase family 2
           [Pseudomonas syringae pv. tomato T1]
 gi|301383239|ref|ZP_07231657.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2
           [Pseudomonas syringae pv. tomato Max13]
 gi|302061449|ref|ZP_07252990.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2
           [Pseudomonas syringae pv. tomato K40]
 gi|302133486|ref|ZP_07259476.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2
           [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|213928577|gb|EEB62121.1| decarboxylase, ornithine/DAP/arginine decarboxylase family 2
           [Pseudomonas syringae pv. tomato T1]
 gi|331018464|gb|EGH98520.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2
           [Pseudomonas syringae pv. lachrymans str. M302278PT]
          Length = 387

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 54/361 (14%), Positives = 113/361 (31%), Gaps = 30/361 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+ +ID   +    D           K+  A+K   A  + + L         +S+YE
Sbjct: 25  ETPFVVIDTAIISKAYDDLRAGFDF--AKVYYAVKANPAVEVINLLKDKGSSFDIASIYE 82

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +        G E  +Y    K  +               ++ + L      A      + 
Sbjct: 83  LDKVLSCGVGPERMSYGNTIKKSKDIRYFYEKGVRLFATDSEADLRNIAKAAPGAKVYVR 142

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177
           +        +        +   +        I +    +   G+ FH   + +    + A
Sbjct: 143 ILTE---GSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDA 199

Query: 178 MLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSV 227
            +  ++  F          ++ I++GGG                ++  + LKE       
Sbjct: 200 AIAKVKVIFERLKEEDGIVLKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDDLP 259

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIY 282
           +I LEPG ++++N   L + V+ ++        + +          +       +     
Sbjct: 260 EIILEPGRSLISNAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIETMDEAIKFPIWT 319

Query: 283 PNTGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337
              G     ++ G +C + DI  E +       + IGDR+ +     Y  +     FNG 
Sbjct: 320 EKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRMYWLSTGAYTTSYSAVEFNGF 379

Query: 338 N 338
            
Sbjct: 380 P 380


>gi|83747080|ref|ZP_00944124.1| Ssd [Ralstonia solanacearum UW551]
 gi|207739670|ref|YP_002258063.1| staphyloferrin b siderophore synthesis decarboxylase protein
           [Ralstonia solanacearum IPO1609]
 gi|83726210|gb|EAP73344.1| Ssd [Ralstonia solanacearum UW551]
 gi|206593052|emb|CAQ59958.1| staphyloferrin b siderophore synthesis decarboxylase protein
           [Ralstonia solanacearum IPO1609]
          Length = 413

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 56/377 (14%), Positives = 100/377 (26%), Gaps = 42/377 (11%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            YL D   L              G +L  A+K  +   +   L+  + G   +SL EV+ 
Sbjct: 19  AYLYDLDHLRERAGRL-SAMLPPGCELFYAIKANSDAPVLAALDGAVAGYEVASLGEVVR 77

Query: 66  GHEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
             E        +    K       A+    + I   +  QL +    A ++ ++  + + 
Sbjct: 78  AREVGAHARIVFGGPGKTDAELQGALERGVELIHVESELQLRRLDAVACRMGRRARVLLR 137

Query: 124 PSVS---------------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE 168
            + +                              + +  +         V GL  H    
Sbjct: 138 VNPNPLSADSAGKRPQGTLTMGGQPTQFGIEEDAVPDLIRLARGLPGVEVVGLHLHALSN 197

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKE 220
           N             L    +        ++ +++GGGI          +  + FC  L  
Sbjct: 198 NLDADSHLALIRHYLALALRLRREHGLTLDTLNVGGGIGVDYAQPSQAFDWRRFCDGLGA 257

Query: 221 FSEK--YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQE 277
              +     +I  E G  I  +     T V+DI         V      H          
Sbjct: 258 LLAEAGAGCRIVFECGRFIAADCGYYVTEVVDIKRTHGKWFAVLRGGTHHFRLPASWQHN 317

Query: 278 SATIYPNTGPYTAM------------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
                     +               +CG  C   D+         + +GDRI F+    
Sbjct: 318 HPFAIVPNAQWAYPFARPSVQAQAVTLCGELCTPKDVLARDVVVDRLSVGDRIVFQLAGA 377

Query: 326 YNINRKNW-FNGINMPT 341
           Y  +  +  F     P 
Sbjct: 378 YGWHISHHDFLSHPHPE 394


>gi|195150603|ref|XP_002016240.1| GL11482 [Drosophila persimilis]
 gi|194110087|gb|EDW32130.1| GL11482 [Drosophila persimilis]
          Length = 395

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 51/357 (14%), Positives = 103/357 (28%), Gaps = 25/357 (7%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
             + D   +    +  +       +    A+KC     +   L +   G   +S  EV L
Sbjct: 34  LNICDLSSVERKYNLWVKYLPR--ITPYYAVKCNDDPMIVKVLAELGAGFDCASKNEVKL 91

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   +    +                   ++   +K         + +R   
Sbjct: 92  VLGLDVAPERIIFANPCRPVSHLEYAQQHRVANGTVDNEFEIYKLHKHYPQSNLIVRFKS 151

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKI-ESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
               ++  L D     +         + ++    V G  FH          +   +K  +
Sbjct: 152 EAKEAQCPLGDKFGCDADADATALMLLAKALDLKVTGTSFHVGSGCSELEAYDRAIKKAK 211

Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV----QIYLEPGEA 236
             F         + ++ +GGG   +D     +   + +    +++      QI  EPG  
Sbjct: 212 NIFKFGELLGYDMNFLDIGGGFPGSDDGK-FQKIAEIVNTSVQRHFPDDRVQIIAEPGRF 270

Query: 237 IVTNTTTLNTTVLDIS-----------ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285
            V    TL   +                       V  S    + D+ +      +  + 
Sbjct: 271 FVAAAYTLVCKIHAKREVRNEAGKLDTIMYYLNDGVYGSFNCILYDHQVVTPEHYLDESA 330

Query: 286 G--PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
               + +++ G SC A D   E      +  GD I F ++  Y +   + FNG  +P
Sbjct: 331 AFPEFKSLIWGPSCDALDKISEDLRLPNLNRGDLIGFPNMGAYTVPIASPFNGFEVP 387


>gi|315125301|ref|YP_004067304.1| diaminopimelate decarboxylase [Pseudoalteromonas sp. SM9913]
 gi|315013814|gb|ADT67152.1| diaminopimelate decarboxylase [Pseudoalteromonas sp. SM9913]
          Length = 401

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 53/378 (14%), Positives = 113/378 (29%), Gaps = 27/378 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+++ D   L  +L   +       VKL  A+K      +   LN        +S  
Sbjct: 19  LDTPFFVYDLDSLNTHLTRLV---AQTEVKLWYAVKANPLSSVIQRLNNAGFNFDVASKG 75

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+          E        K  +           T +  +++Q+    ++A     ++
Sbjct: 76  ELEQVLAQGINSERVLNTGPAKSPKQIKHFIARGVRTFVAESLNQVRWLNEQAIAQQCQL 135

Query: 119 GLRINPSVSYSKFILADPNRPF-SRLGEKCKDKI-----ESEIKNVNGLMFH----NNCE 168
            + +   + + +           +  G  C +       +    N +GL           
Sbjct: 136 QVLLRVQLRWPEGDKNPLGGDSLTPFGLGCDEWQTLNTSDYCALNFDGLHIFQWGNMLSS 195

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL-----KEFSE 223
           +K    ++ M+  + +        ++ + LGGG+               L     K   +
Sbjct: 196 DKLAELWTQMITPLRQLAEDLNINLKVLDLGGGLGIPYTLDTPSLSWDALIEALAKIKCD 255

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDY---LLYQESA 279
               ++++E G   V       T V++      +  VI+   +   +        +    
Sbjct: 256 AGVTELWMELGRYAVGECGHYATPVVERKLNYGQQQVIMSGGINHLLRPAVTSQDFPARL 315

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338
               N       + G  C A D  GE      +   D + F     Y        F    
Sbjct: 316 LRDSNAANQAMSLYGPLCTALDCLGEHQLPSDLNEQDWLVFSQCGAYGFTESMPYFLCHE 375

Query: 339 MPTIAVKNVDGTIKAIRE 356
           +    V + +G +  +R+
Sbjct: 376 LAGEYVID-NGVLSCVRQ 392


>gi|297472150|ref|XP_002685706.1| PREDICTED: ornithine decarboxylase 1-like [Bos taurus]
 gi|296490255|gb|DAA32368.1| ornithine decarboxylase 1-like [Bos taurus]
          Length = 683

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 52/357 (14%), Positives = 100/357 (28%), Gaps = 30/357 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           + + D   L +             V     +KC ++  M   L         SS  E+  
Sbjct: 69  FMVADLDVLASRHQVFRQALPR--VSPFYVVKCNSSPWMLRVLAALGTSFDCSSQGELEQ 126

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
             +         Y  A K        S      ++FN+     +    AQ       +  
Sbjct: 127 VLDLGVAPSRIVYANACKPVSHIRFASLHGVKLLVFNS---EEELIKVAQHHPGARLVLW 183

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
               S S F L+        + E   +        V G  FH     ++   F   + + 
Sbjct: 184 WTQDSDSIFPLSSKFGARLEVCEHLLESARDLGLAVVGTSFHVGSRCQTPRNFMKAIVDC 243

Query: 183 EKEFGH---FITQIEWISLGGGIHFTDKDYPVKD------FCQRLKEFSEKYSVQIYLEP 233
            + F         +  + + GG    +   P  +           ++F E   V++  EP
Sbjct: 244 RRVFEMGSSIGHDMSLLDIRGGFSREEGSDPEFEEVAGVINAALAQDFPEGSGVEVIAEP 303

Query: 234 GEAIVTNTTTLNTTVLDI--------SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285
           G    T   T    ++             +   +         +           +    
Sbjct: 304 GRFYATFVCTTAVNIIAKKAVLEPRGRRKLLYYLNDGHYGTFRIFPRESEPRMPIMVKEL 363

Query: 286 GP----YTAMVCGRSCLAGD-IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
            P    +   + G +C A D +F +      + +GD + F  +  Y     + F+G+
Sbjct: 364 SPKLSLFPCTLFGPTCDAFDKLFLKEVQLPELDVGDWLVFPFMGAYTSVLSSTFSGL 420


>gi|194664373|ref|XP_610618.4| PREDICTED: ornithine decarboxylase 1-like [Bos taurus]
          Length = 441

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 52/357 (14%), Positives = 100/357 (28%), Gaps = 30/357 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           + + D   L +             V     +KC ++  M   L         SS  E+  
Sbjct: 69  FMVADLDVLASRHQVFRQALPR--VSPFYVVKCNSSPWMLRVLAALGTSFDCSSQGELEQ 126

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
             +         Y  A K        S      ++FN+     +    AQ       +  
Sbjct: 127 VLDLGVAPSRIVYANACKPVSHIRFASLHGVKLLVFNS---EEELIKVAQHHPGARLVLW 183

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
               S S F L+        + E   +        V G  FH     ++   F   + + 
Sbjct: 184 WTQDSDSIFPLSSKFGARLEVCEHLLESARDLGLAVVGTSFHVGSRCQTPRNFMKAIVDC 243

Query: 183 EKEFGH---FITQIEWISLGGGIHFTDKDYPVKD------FCQRLKEFSEKYSVQIYLEP 233
            + F         +  + + GG    +   P  +           ++F E   V++  EP
Sbjct: 244 RRVFEMGSSIGHDMSLLDIRGGFSREEGSDPEFEEVAGVINAALAQDFPEGSGVEVIAEP 303

Query: 234 GEAIVTNTTTLNTTVLDI--------SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285
           G    T   T    ++             +   +         +           +    
Sbjct: 304 GRFYATFVCTTAVNIIAKKAVLEPRGRRKLLYYLNDGHYGTFRIFPRESEPRMPIMVKEL 363

Query: 286 GP----YTAMVCGRSCLAGD-IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
            P    +   + G +C A D +F +      + +GD + F  +  Y     + F+G+
Sbjct: 364 SPKLSLFPCTLFGPTCDAFDKLFLKEVQLPELDVGDWLVFPFMGAYTSVLSSTFSGL 420


>gi|307701187|ref|ZP_07638209.1| diaminopimelate decarboxylase [Mobiluncus mulieris FB024-16]
 gi|307613581|gb|EFN92828.1| diaminopimelate decarboxylase [Mobiluncus mulieris FB024-16]
          Length = 538

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 56/417 (13%), Positives = 114/417 (27%), Gaps = 75/417 (17%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNA----GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           TP +++D                        ++  A K F   G+         G  ++S
Sbjct: 66  TPVFIMDMDDFRKRARAWREAFTKTFGKGNAQVYYAGKAFLCLGLARVATAQGLGLDTAS 125

Query: 60  LYEVMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
             E+ L             +   K       AV +    II ++++++ + +     L +
Sbjct: 126 PGELTLALASGIDPLRVGLHGNGKSAALLHQAVSAGIGRIIIDSLAEIPRLQRVLDALPQ 185

Query: 117 ----KIGLRINPSVSYSKFILADPNRPFSRLGEKCK------------------------ 148
                + +R+   V               + G   +                        
Sbjct: 186 AATVPVMIRLTTGVHAGGHEYIATAHEDQKFGLSLEPGTHAGLCPDDSDWDGCYVVSPAD 245

Query: 149 --------DKIESEIKNVNGLMFHNNCENKSFLCF----SAMLKNIEKEFGHFITQIEWI 196
                     +  +   + GL  H   +  +F  F      +++            +  I
Sbjct: 246 SPALAAVKLILADDRLELVGLHSHIGSQISAFAGFTAAAQKIIEFRGAVARETGYLVPEI 305

Query: 197 SLGGGIHFTDKDYPVKDFC---------QRLKEFSEKYSVQ---IYLEPGEAIVTNTTTL 244
            LGGG                       + +++  E++      + +EPG ++V  TT  
Sbjct: 306 DLGGGYGVAYTAATPPGMAPHEIAEKLYRAVQDACEQHDQPLPAVSVEPGRSLVAPTTIT 365

Query: 245 NTTVLDISEN-----------IKNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYT 289
              VL+I +             +  V VD  +  ++   L         A          
Sbjct: 366 LYRVLNIKDQPVGTRLDGSVVYRRYVAVDGGMSDNIRPALYDAHYTATLANRLSAAPLVA 425

Query: 290 AMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
             V G  C +GDI          +  GD ++      Y  +  + +N    P +   
Sbjct: 426 TRVVGTHCESGDIVVRNVALPADLTEGDLLAVPMTGAYGWSMSSNYNWFTRPGVLGV 482


>gi|328544617|ref|YP_004304726.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein
           [polymorphum gilvum SL003B-26A1]
 gi|326414359|gb|ADZ71422.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein
           [Polymorphum gilvum SL003B-26A1]
          Length = 376

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 44/353 (12%), Positives = 103/353 (29%), Gaps = 30/353 (8%)

Query: 17  NLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH-EKFGGETH 75
           N +            +  A+K   A  +   L +       +S+ E+ +      G E  
Sbjct: 29  NYEAFARAL--PDTSVYYAVKANPAPEILSLLAELGSSFDCASVGEIEMVLAAGAGAERI 86

Query: 76  AYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFIL 133
           +Y      +     A          ++ ++++K    A        +  +   +      
Sbjct: 87  SYGNTIKKERDIARAFELGVRLFAVDSDAEVDKIARAAPGSKVFCRILCDGVGAEWPLSK 146

Query: 134 ADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FI 190
                P         ++        +G+ FH   +  +   +   L      F       
Sbjct: 147 KFGCVPEMA--PDVLEQAHRSGLVAHGVSFHVGSQQANLGAWDNALATAAAVFRETARRG 204

Query: 191 TQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGEAIVTNTTTL 244
            +++ +++GGG                    Q L +       +  +EPG  +V +   +
Sbjct: 205 IELKMVNMGGGFPARYLKDVPGVPAYGQAIFQALSDHFGNRLPETIIEPGRGMVGDAGLI 264

Query: 245 NTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRS 296
              V+ IS    +  +            +   + + + Y        +      ++ G +
Sbjct: 265 EAEVVLISRKSADDAVRWVYLDIGKFHGLAETMDEAIRYPIRTARDGDETA-PCVLAGPT 323

Query: 297 CLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGI-NMPTIAV 344
           C + D+  E   +     + IGD++  E    Y        FNG   + +  +
Sbjct: 324 CDSVDVLYEKTPYELPVSLSIGDKVLIEACGAYTTTYSTVGFNGFAPLASYVI 376


>gi|118793147|ref|XP_001238365.1| AGAP011807-PA [Anopheles gambiae str. PEST]
 gi|116117239|gb|EAU75863.1| AGAP011807-PA [Anopheles gambiae str. PEST]
          Length = 397

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 62/373 (16%), Positives = 116/373 (31%), Gaps = 33/373 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +++D   ++       +  +   VK   A+KC     +  TL     G   +S  E+ 
Sbjct: 32  PLHVLDLDDVVR--KHYGWCAQMPRVKPYYAVKCNDDPRILQTLMTLGTGFDCASKGEME 89

Query: 65  LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                    E+  +    K       A       + F+   +L K      +      L 
Sbjct: 90  RMLGYGVKPESIIFAQPAKSIPSLLYARSKQVSVMTFDGAVELEKIHQYYPEA----RLV 145

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIES---EIKNVNGLMFHNNCENKSFLCFSAM 178
           +       K   +   +       +  + +        NV G+ FH   +      +   
Sbjct: 146 LRMRHDSLKVRCSLGKKFGCDPIAEAPELLRYAATLRMNVIGISFHVGSDCDEHEVYYEA 205

Query: 179 LKNIEKEFGH---FITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFSEKYSVQIYL 231
           +K  +  F +      +   + +GGG    +      Y         + F  +  ++I  
Sbjct: 206 VKIAKGLFEYAKTIGYEFSLLDIGGGFPGDNDKPIDRYVQAVNVAIDQFFPAESDIRIIA 265

Query: 232 EPGEAIVTNTTTLNTTVL-----------DISENIKNLVIVDSSVEAHVPDYLLYQESAT 280
           EPG   V++  TL + V               +      + D          L  Q+   
Sbjct: 266 EPGRYYVSSAVTLVSFVDSKRVMKEKQPDGTEKTRMYYYLNDGIFGTFYCTALEGQQVVP 325

Query: 281 IYPNT--GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
           I  +     Y   + G +C   D   E      + +GD + FE+V  Y +   N FNG  
Sbjct: 326 IVRSKLTKRYDTTLWGPTCHVVDKIAEAR-LPELDVGDSVVFENVGAYGMVLANQFNGFP 384

Query: 339 MPTIAVKNVDGTI 351
           +P +     +GT 
Sbjct: 385 LPKVRAYLREGTW 397


>gi|330962453|gb|EGH62713.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2
           [Pseudomonas syringae pv. maculicola str. ES4326]
          Length = 387

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 54/361 (14%), Positives = 113/361 (31%), Gaps = 30/361 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+ +ID   +    D           K+  A+K   A  + + L         +S+YE
Sbjct: 25  ETPFVVIDTAIISKAYDDLRAGFDF--AKVYYAVKANPAVEVINLLKDKGSSFDIASIYE 82

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +        G E  +Y    K  +               ++ + L      A      + 
Sbjct: 83  LDKVLSCGVGPERMSYGNTIKKSKDIRYFYEKGVRLFATDSEADLRNIAKAAPGSKVYVR 142

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177
           +        +        +   +        I +    +   G+ FH   + +    + A
Sbjct: 143 ILTE---GSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDA 199

Query: 178 MLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSV 227
            +  ++  F          ++ I++GGG                ++  + LKE       
Sbjct: 200 AIAKVKVIFERLKEEDGIVLKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDDLP 259

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIY 282
           +I LEPG ++++N   L + V+ ++        + +          +       +     
Sbjct: 260 EIILEPGRSLISNAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIETMDEAIKFPIWT 319

Query: 283 PNTGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337
              G     ++ G +C + DI  E +       + IGDR+ +     Y  +     FNG 
Sbjct: 320 EKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRMYWLSTGAYTTSYSAVEFNGF 379

Query: 338 N 338
            
Sbjct: 380 P 380


>gi|325275905|ref|ZP_08141752.1| ornithine decarboxylase [Pseudomonas sp. TJI-51]
 gi|324098955|gb|EGB96954.1| ornithine decarboxylase [Pseudomonas sp. TJI-51]
          Length = 387

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 56/359 (15%), Positives = 119/359 (33%), Gaps = 26/359 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+ LID Q +    D      +    K+  A+K   A  + D L +       +S+YE
Sbjct: 25  ETPFVLIDTQMISQAYDDLRAGFEF--AKVYYAVKANPAVEIIDLLKEKGSSFDIASIYE 82

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +          +  +Y    K  +           ++ T S+ +  ++ A+         
Sbjct: 83  LDKVLGRGVSADRISYGNTIKKSKDIRYFYEKGVRLYATDSEAD-LRNIAKAAPGSKVYV 141

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179
              +   +        +   +        I +    +   G+ FH   + +    + A +
Sbjct: 142 RILTEGSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDAAI 201

Query: 180 KNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSVQI 229
             ++  F         +++ I++GGG                ++  + LKE       +I
Sbjct: 202 AKVKVIFERLKEEDGIELKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDELPEI 261

Query: 230 YLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
            LEPG +++ N   L + V+ ++        + +          +       +       
Sbjct: 262 ILEPGRSLIANAGILVSEVVLVARKSRTAVERWIYTDVGKFSGLIETMDEAIKFPIWTEK 321

Query: 285 TGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338
            G     ++ G +C + DI  E +       + IGDR+ +     Y  +     FNG  
Sbjct: 322 KGETEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLYWLATGAYTTSYSAVEFNGFP 380


>gi|213966939|ref|ZP_03395089.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2
           [Pseudomonas syringae pv. tomato T1]
 gi|301385124|ref|ZP_07233542.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2
           [Pseudomonas syringae pv. tomato Max13]
 gi|302059679|ref|ZP_07251220.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2
           [Pseudomonas syringae pv. tomato K40]
 gi|302131930|ref|ZP_07257920.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2
           [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|213928261|gb|EEB61806.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2
           [Pseudomonas syringae pv. tomato T1]
          Length = 402

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 60/377 (15%), Positives = 120/377 (31%), Gaps = 32/377 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            ++ D   L  ++   +     AGV+L  A+K  +   M +TL   + G   SS  E+  
Sbjct: 25  AFIYDLDALQQHVSEVMAALP-AGVELYYAIKANSEALMLETLAPLVSGFEISSGGEIER 83

Query: 66  GHEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQK--LHKKIGLR 121
                  + + ++     D ++ + L N    +   +++++ + +  A++    + + +R
Sbjct: 84  VMACPTRKPYVFSGPGKLDSDLRSALLNKVEAVHLESLNEIQRLQHLAEQTGRVQPVFIR 143

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENKSFLC 174
           INP +  ++          +  G    D  E+           + G   H      S   
Sbjct: 144 INPQLPAAQSSKLAMAGTATPFGIDEADLAEAVRLVDSATHLTLKGFHVHAMSHQMSVER 203

Query: 175 FSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKY 225
              +L    + +  +         +   ++GGGI       + +  +     L++   + 
Sbjct: 204 HEQLLDFYLQRWQAWKALARHPEHLTHFNVGGGIGVDYLNSQQFDWQRLFCYLEKRLGEQ 263

Query: 226 SVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282
                L  EPG  I          VLD   +     +V                +   I+
Sbjct: 264 PDSPILRFEPGRFISAYCGYYVIEVLDRKTSHGEHFLVCRGGTHQFRLPVAQSHDHPVIH 323

Query: 283 PNTGPYT-------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WF 334
             + P T         V G+ C   D+       K V IGD +       Y  N  +  F
Sbjct: 324 LPSVPPTAASPEQAYTVVGQLCTPKDVLSRRQPFKDVNIGDLLVLPMAGAYGYNISHADF 383

Query: 335 NGINMPTIAVKNVDGTI 351
                P          +
Sbjct: 384 LCHPRPPQHFVRNGERV 400


>gi|330823348|ref|YP_004386651.1| pyridoxal-dependent decarboxylase [Alicycliphilus denitrificans
           K601]
 gi|329308720|gb|AEB83135.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Alicycliphilus denitrificans K601]
          Length = 401

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 51/376 (13%), Positives = 105/376 (27%), Gaps = 34/376 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+Y  D+  +   +     +    GV L  A+K      +   +   +DG   +S  E
Sbjct: 27  QTPFYAYDRSLIAARVAGVRQVLPQ-GVLLHYAIKANPMPALVGFMRPLVDGMDVASAGE 85

Query: 63  VMLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           + L        +T  +     +D E+   ++    +   +  +L      AQ L +   +
Sbjct: 86  LKLALDAGADPQTIGFAGPGKRDAELRQAVAAGVLLHVESARELEALAASAQALGRPARV 145

Query: 121 RINPSVSYSKFILADPNRPFSR-LGEKCKD------KIESEIKNVNGLMFHNNCENKSFL 173
            +  +  +             +  G   +        +  +     G   +   +N    
Sbjct: 146 ALRINPDFELRGAGMHMGGGPKPFGIDAEQVPAMLRAMARDGLAFEGFHIYPGSQNLRGN 205

Query: 174 CFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTD-------KDYPVKDFCQRLKEFS 222
             +  L    +            + +++LGGG            +  PV D   +++   
Sbjct: 206 VIAESLHRSVELVQRLAHDAPAPVRYVNLGGGWGIPYVAGERRLELPPVADALAQVQAAL 265

Query: 223 EK--YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-------- 272
            +     Q+ LE G  +V         V+D   +   + +V                   
Sbjct: 266 GRALPEAQMVLELGRYLVGEAGIYVARVIDRKVSRGQVFLVTDGGMHQHLAASGNFGQVI 325

Query: 273 --LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                             +A V G  C   D+  E       + GD +       Y    
Sbjct: 326 RRNYPVVIGNRLQAAERESATVVGPLCTPLDVLAERMELAVAQPGDLVVVLQSGAYGATA 385

Query: 331 KNW-FNGINMPTIAVK 345
               F G       + 
Sbjct: 386 SPQAFLGHPPCAEVLV 401


>gi|322696105|gb|EFY87902.1| ornithine decarboxylase [Metarhizium acridum CQMa 102]
          Length = 427

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 59/365 (16%), Positives = 107/365 (29%), Gaps = 37/365 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++        + +    +K   A+KC     +   L +   G   +S  E+  
Sbjct: 46  FFVADLGEVYR--QHLRWKKNLPRIKPFYAVKCNPDPKVLRLLAELGTGFDCASKGEIEQ 103

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                   E   Y    K       + N     + F+   +L K      +    + +  
Sbjct: 104 VLAMGTTPERIIYAQPCKTNSYVRFVKNAGVKQMTFDNADELYKIAKLYPEAELFLRIMT 163

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           + + S  +  +       +  G       ++   NV G+ FH        L F   +++ 
Sbjct: 164 DDASSLCRLSMKFGAAMDTTEGLLA--VAKNLGLNVVGVSFHVGSGASDPLAFCKAVRDA 221

Query: 183 EKEF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
              F     F   +  + +GGG    T +           + F     + I  EPG   V
Sbjct: 222 HTVFQQAAEFGFAMRTLDVGGGFCGDTFEQMSGVLRDALDEFFPAGNGIDIIAEPGRYYV 281

Query: 239 TNTTTLNTTVLD---------------ISENIKNLVIVDSSVEAHVPDYL---------- 273
           +   T+   ++                +  N        S +  H               
Sbjct: 282 STAFTIACNIIARRTVEDPTLDGKGYMVYINDGVYGNFSSIMFDHQHPVAKILRSDGRTL 341

Query: 274 LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFEDVAGYNINRKN 332
               SA            V G +C   D   E   FE  + +GD + FED+  Y      
Sbjct: 342 YNTASANACNAGEGVEYSVWGPTCDGIDRISESIRFETILNVGDWLYFEDMGAYTKCSAT 401

Query: 333 WFNGI 337
            FNG 
Sbjct: 402 QFNGF 406


>gi|170738789|ref|YP_001767444.1| ornithine decarboxylase [Methylobacterium sp. 4-46]
 gi|168193063|gb|ACA15010.1| Ornithine decarboxylase [Methylobacterium sp. 4-46]
          Length = 390

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 43/364 (11%), Positives = 104/364 (28%), Gaps = 33/364 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   + +N             ++  A+K   A  +   L        ++S+ E+ 
Sbjct: 23  PVMVLDLDVVRDNYHAFARAL--PDTRVFYAVKANPAPEVLGLLASLGSCFDTASVAEIQ 80

Query: 65  LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI--- 118
           +        +  ++      + C   A+         +  +++ K    A          
Sbjct: 81  MALAAGATADRISFGNTIKKERCIARALALGVRLFAVDCEAEVEKIARAAACADVAPEEV 140

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFS 176
            +        +        +              +  + +   G+ FH   +  +   + 
Sbjct: 141 QVFCRILCDGAGAEWPLSRKFGCVPDMAVDVLEHAHRQGLRAYGVSFHVGSQQGNTEAWD 200

Query: 177 AMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSV 227
             L +    F         +  ++LGGG                    + L +       
Sbjct: 201 GALASAAMIFRECAERGIALAMVNLGGGFPTKYLKEVPGVESYGGAIFRALTKHFGNRMP 260

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENI---------KNLVIVDSSVEAHVPDYLLYQES 278
           +  +EPG  +V N   +   V+ +S+              +     +   + + + Y+  
Sbjct: 261 ETIIEPGRGMVGNAGIIEAEVILVSKKSEAADEVRWVYLDIGKFGGLAETMDESIRYRIR 320

Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-F 334
                +      ++ G +C + D+  E   +     + IGD++  E    Y        F
Sbjct: 321 TDHDEDRM-VPCVLAGPTCDSADVLYEKIPYPLPVSLSIGDKVLIEGAGAYTTTYAAVAF 379

Query: 335 NGIN 338
           NG  
Sbjct: 380 NGFP 383


>gi|159030424|emb|CAO91325.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 569

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 66/375 (17%), Positives = 126/375 (33%), Gaps = 26/375 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+++  +L  NL   +     +  ++   +K   +  + + L         SS YE
Sbjct: 28  GSPLYILNVGQLRRNLSHFVE-LVGSPSQVAYPVKANPSMAILNELVSLGCSADCSSKYE 86

Query: 63  VMLGHE-KFGGETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           V L     F      YN    D + +  +L    T++ ++ + L+  + K         L
Sbjct: 87  VELALSCGFPLNRITYNSPAPDRQLMVDLLDGGATVVADSQAILDDLQHKLYGKDWSGSL 146

Query: 121 RINPS--------VSYSKFILADPNRPFSRLGEKCKDKIESEIKN---VNGLMFHNNCEN 169
            +  +         +     L     P S+ G   ++  ++       + GL  H   + 
Sbjct: 147 LVRVNPEKPVEYFHNTDWQDLVSHASPNSKFGIPSEELPDAPASCQLPIAGLHIHIGTQM 206

Query: 170 KSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
            +   FS  ++ I              +  ++LGGG+     D           E  +K+
Sbjct: 207 DNVSAFSHSIQFIHHLKNLIEACSHHCMRKLNLGGGLGIDFHDGQQFPTIPEYTEALKKH 266

Query: 226 ---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
               ++  +EPG A+V N   L T + ++ +       +       +    L   S  I 
Sbjct: 267 LLPGIEYIVEPGHALVGNAVALLTRIRELKQMRGRRWAIVDVGSDQLIKVTLLSWSHQII 326

Query: 283 PNTGPYTAM-----VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                         + G  C AGDI       +    GD +  +    Y  +  N FNG 
Sbjct: 327 DRNHRTLPTQGDDAIGGPLCFAGDILLPSTNLEGQSPGDPLLIQHAGAYCYSVNNHFNGF 386

Query: 338 NMPTIAVKNVDGTIK 352
           + P     +  G I+
Sbjct: 387 HGPGHITIDEMGQIE 401


>gi|313220937|emb|CBY31771.1| unnamed protein product [Oikopleura dioica]
          Length = 435

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 66/394 (16%), Positives = 124/394 (31%), Gaps = 37/394 (9%)

Query: 3   KTPYY-LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++P   L D + L            +       A+K     G+         G  ++S+ 
Sbjct: 31  ESPVLDLYDLEGLRGRFKEVQDALPSWNH--AFAIKTNPIRGVMLEAKNCGLGAEAASIG 88

Query: 62  EVMLGHE-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK-- 117
           E+    +  F      Y +       +   L+    I  + + ++ K       L+    
Sbjct: 89  ELEHALQLGFDRSKIVYDSPVKTKAHLKHALNAGVVINLDNLEEIEKVNQLLPDLNVDVT 148

Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLG-------EKCKDKIESEIKNVNGLMFHNNCE 168
             IG+R+NP+V   K  ++      S+ G       E    KI  E   + GL  H   +
Sbjct: 149 GKIGMRVNPNVGAGKIAMSSTAGKSSKFGLPMTGEFEDEVVKIILENSWIQGLHQHIGSQ 208

Query: 169 NKSFLCFSAMLKNIEKEFGHFI-----TQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223
             S    +  ++ +              QI++I +GGGI    +    K       +   
Sbjct: 209 GISLDQLTLGVERLVALARKINELAGTKQIKYIDVGGGIPTDYESDNEKVAYAEYAKLVN 268

Query: 224 KY-----SVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLL--- 274
           +          + E G ++VT      + V  +     +  V+        + +  L   
Sbjct: 269 ERVPNLDEFNFHSEFGRSLVTKYAISVSKVETVKTWGDRITVLTHFGSNQFLREVYLPDT 328

Query: 275 YQESATIYPNTGPYTA------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
           +    ++    G           V G  C  GD   +      +K GD I   D+ GY  
Sbjct: 329 WFHRMSVLDQNGDPKVSDLIEQDVGGPLCFQGDYLAKARALPEIKPGDYIVMHDIGGYTY 388

Query: 329 NRKNWFNGINMPTIAVKN-VDGTIKAIREFSYND 361
              + FN I  P +   +  +   +     S  +
Sbjct: 389 ALYSRFNSIQAPAVYGYDASENFYELKSRESLAE 422


>gi|159038615|ref|YP_001537868.1| Orn/DAP/Arg decarboxylase 2 [Salinispora arenicola CNS-205]
 gi|157917450|gb|ABV98877.1| Orn/DAP/Arg decarboxylase 2 [Salinispora arenicola CNS-205]
          Length = 418

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 57/391 (14%), Positives = 103/391 (26%), Gaps = 38/391 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TP Y+ D  ++  N             ++  +LK      + DTL +        S+ 
Sbjct: 22  VQTPAYVYDLAEVRANAVRLRAALPER-SEIYYSLKANPHPAILDTLREQGARAEVCSVG 80

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL-HKK 117
           E+       +  +T  Y    K  +               ++   L++    A +   + 
Sbjct: 81  ELDESLAAGWPPDTLLYTGPGKRDQDLRHALRRGVREFSVDSPIGLDQLDRLAGEAGVQA 140

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC-------KDKIESEIKNVNGLMFHNNCENK 170
             L                    S+ G                    V GL  +      
Sbjct: 141 RCLLRINDDQPVPGQGLTMTGVASQFGVDVSWVFADPARFTGGLNAPVVGLHLYMGTNMT 200

Query: 171 SFLCFSAML-------KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223
                 A           +         ++  + LGGG                L++   
Sbjct: 201 EVHDLLAQFGRSLATAAQLRCALARHGVRLRVVDLGGGFGAPFACVGEPVVLSGLRDGLY 260

Query: 224 KYSV-----------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH---- 268
           +              ++  E G  +V    TL T VLD+  +    ++V  S   H    
Sbjct: 261 RLLDAELPGWRDGAVRVVFESGRYLVGTAGTLVTRVLDVKRSHGRDLVVLESGINHLGGM 320

Query: 269 --VPDYLLYQESATIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
             +                G     MV G  C   D++       P+  GD +   +V  
Sbjct: 321 SGLRRLPPLNPHLLSDTAAGDLRPTMVAGPLCTPLDLWSRNAPLSPLHPGDTLQVPNVGA 380

Query: 326 YNINRKNW-FNGINMPTIAVKNVDGTIKAIR 355
           Y ++     F     PT    + D      R
Sbjct: 381 YGLSASLLAFLSHPTPTEVAVDGDQVTHVSR 411


>gi|170723475|ref|YP_001751163.1| ornithine decarboxylase [Pseudomonas putida W619]
 gi|169761478|gb|ACA74794.1| Ornithine decarboxylase [Pseudomonas putida W619]
          Length = 387

 Score =  149 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 55/359 (15%), Positives = 119/359 (33%), Gaps = 26/359 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+ LID Q +    D      +    K+  A+K   A  + D L +       +S+YE
Sbjct: 25  ETPFVLIDTQMISQAYDDLRAGFEF--AKVYYAVKANPAVEIIDLLKEKGSSFDIASIYE 82

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +          +  +Y    K  +           ++ T S+ +  ++ A+         
Sbjct: 83  LDKVMGRGVSADRISYGNTIKKSKDIRYFFEKGVRLYATDSEAD-LRNIAKAAPGSKVYV 141

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179
              +   +        +   +        I +    +   G+ FH   + +    + A +
Sbjct: 142 RILTEGSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDAAI 201

Query: 180 KNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSVQI 229
             ++  F         +++ I++GGG                ++  + LKE       +I
Sbjct: 202 AKVKVIFERLKEEDGIELKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDDLPEI 261

Query: 230 YLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
            LEPG +++ N   L + V+ ++        + +          +       +       
Sbjct: 262 ILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIETMDESIKFPIWTEK 321

Query: 285 TGP-YTAMVCGRSCLAGDIF---GEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338
            G     ++ G +C + DI     ++     + IGDR+ +     Y  +     FNG  
Sbjct: 322 KGEMEEVVIAGPTCDSADIMYEHYKYGLPLNLAIGDRLYWLSTGAYTTSYSAVEFNGFP 380


>gi|86749199|ref|YP_485695.1| Orn/DAP/Arg decarboxylase 2 [Rhodopseudomonas palustris HaA2]
 gi|86572227|gb|ABD06784.1| diaminopimelate decarboxylase [Rhodopseudomonas palustris HaA2]
          Length = 428

 Score =  149 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 51/383 (13%), Positives = 97/383 (25%), Gaps = 36/383 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   +              G +L  A+K   A  +         G   +S  E
Sbjct: 20  GTPLFIYDAPAMRAAAARLQEALP-PGARLFFAVKANPAPDVIRLFAGEGLGAEVASGGE 78

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIF--NTVSQLNKFK--DKAQKLHKK 117
           + L        +   ++   K                   +V++L+  +    A+    +
Sbjct: 79  LRLALACGVAPDRIVFSGPAKTAPELRCAIEACIFAVQAESVAELDTLQALCVARGATVR 138

Query: 118 IGLRINPSVSYSKFILADPNRPF----SRLGEKCKDKIESEIKNVNGLMFHNNCENKSFL 173
           + LR+N      +        PF      L E        +   + GL  H   +     
Sbjct: 139 VALRVNLGPGGERRGGWGGPSPFGMDTDALDEVTARAARLDRLRIVGLHNHQASQTLDPA 198

Query: 174 CFSAMLKNIEKEFGHFI--TQIEWISLGGGIHFTDKDYPVK-------DFCQRLKEFSEK 224
              A      +          +++++ GGG                       L      
Sbjct: 199 KLIARFDAFARVAASLGSRFDLQFVNFGGGFGAPFYADDAPLDLAPVRACFAALAGVFGD 258

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-----------PDYL 273
             +Q   E G  +V         V+D+  +      +      HV               
Sbjct: 259 RPLQFAAESGRYLVGPAGCYVARVVDVKRSFGVRYALLDGGIHHVLGLSGTMRSLRRPVA 318

Query: 274 LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKN 332
           +                 + G  C   D           +  GD ++F +   Y  +   
Sbjct: 319 V--ARVGARSGEPCEPTEIAGPLCTPIDRLAGAAELPCDLAAGDLLAFANCGAYAKHASP 376

Query: 333 -WFNGINMPTIAVKNVDGTIKAI 354
             F G + P   +   DG    +
Sbjct: 377 LNFLGHDWPAELMI--DGARVIV 397


>gi|312210257|emb|CBX90344.1| similar to ornithine decarboxylase [Leptosphaeria maculans]
          Length = 446

 Score =  149 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 50/369 (13%), Positives = 103/369 (27%), Gaps = 31/369 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++        + +  + VK   A+KC     +   + +   G   +S  E+  
Sbjct: 67  FFVADLGEVYR--QHMRWKKNLSRVKPHYAVKCNPDLQVLRLMTELGMGFDCASKNEIET 124

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             +         Y    K        +          +    +K K      ++ LRI  
Sbjct: 125 VLKLGVDPSRIIYAQPCKTKSYVRYAAQSGVKQMTFDNADELYKTKQLFPDAELYLRILT 184

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S S   L+           +  +  +    NV G+ FH          F   +++   
Sbjct: 185 DDSASLCRLSQKFGASLDTTAELLELAKKLELNVVGVAFHVGSGASDPKAFIKAVQDARF 244

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            F         +  + +GGG        P+        +      +++  EPG   V+  
Sbjct: 245 VFDQAAALGFNMHTLDVGGGFTGDVTFEPMAAVLSASLDEYFPPHIRVIAEPGRYYVSTA 304

Query: 242 TTLNTTVLDISE-------NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG-------- 286
            T+   V+               ++ ++  V  +    +   +                 
Sbjct: 305 FTIACNVIARRTVTDATLGTTSYMLYLNDGVYGNFSSIIFDHQHPQPRVLKNGNNVLYDV 364

Query: 287 ---------PYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNG 336
                         + G +C   DI          + +GD + FED+  Y       FNG
Sbjct: 365 RRSGYDTPSQVEYSIWGPTCDGIDIISTSCTFPELLDVGDWLYFEDMGAYTKCSATRFNG 424

Query: 337 INMPTIAVK 345
                  + 
Sbjct: 425 FTDSHEVIY 433


>gi|154320654|ref|XP_001559643.1| hypothetical protein BC1G_01799 [Botryotinia fuckeliana B05.10]
 gi|150853488|gb|EDN28680.1| hypothetical protein BC1G_01799 [Botryotinia fuckeliana B05.10]
          Length = 531

 Score =  149 bits (377), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 57/360 (15%), Positives = 98/360 (27%), Gaps = 31/360 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++        + +    VK   A+KC     +   L +   G   +S  E+  
Sbjct: 154 FFVADLGEVYR--QHMRWKKNLPRVKPFYAVKCNPDPQVIRLLAELGTGFDCASKGEIEQ 211

Query: 66  GH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       Y    K                   +    +K K      ++ LRI+ 
Sbjct: 212 VLKAGIDPTRIIYAQPCKTNSYVRYAEKNGVKQMTFDNSDELYKIKKLFPGAELFLRIST 271

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S S   L+                      NV G+ FH        L F   +++   
Sbjct: 272 DDSSSLCRLSLKFGAAMDATNNLLALARELDLNVVGVSFHVGSGASDPLAFRKAVQDAHT 331

Query: 185 EFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            F     F   +  + +GGG      +         L+E+    +++I  EPG   V N 
Sbjct: 332 VFEQARNFGYYMHTLDVGGGFCTETFEVMASVLSDALEEYM-PKNIKIIGEPGRYYVANA 390

Query: 242 TTLNTTVLDISENIKN---------------LVIVDSSVEAHVPDYLLYQESATIYPNTG 286
            TL   V+                            S +  H        ++        
Sbjct: 391 FTLACNVIARRTVEDPESLEKSYMLYLNDGLYGNFSSIMFDHQNPIAQVLQTGNRSYFNT 450

Query: 287 PY--------TAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                        + G +C   D       F   + +GD + FE +  Y       FNG 
Sbjct: 451 LESCATLEGTEYSIWGPTCDGIDRISASIRFNHNLDVGDWLYFESMGAYTKCSATRFNGF 510


>gi|322706473|gb|EFY98053.1| ornithine decarboxylase [Metarhizium anisopliae ARSEF 23]
          Length = 447

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 59/363 (16%), Positives = 103/363 (28%), Gaps = 33/363 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++        + +    +K   A+KC     +   L +   G   +S  E+  
Sbjct: 66  FFVADLGEVYR--QHLRWKKNLPRIKPFYAVKCNPDPKVLRLLAELGAGFDCASKGEIEQ 123

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K       + N         +    +K        ++ LRI  
Sbjct: 124 VLAMGTTPERIIYAQPCKTNSYVRFVKNAGVKQMTFDNADELYKIAKLYPEAELFLRIMT 183

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN---KSFLCFSAMLKN 181
             + S   L+          E      ++   NV G+ FH         +F         
Sbjct: 184 DDASSLCRLSMKFGAAMDTTESLLAVAKNLGLNVVGVSFHVGSGASDPLAFYKAVRDAHA 243

Query: 182 IEKEFGHFITQIEWISLGGGI-HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
           + ++   F   +  + +GGG    T +           + F     + I  EPG   V+ 
Sbjct: 244 VFQQAAEFGFTMRTLDVGGGFCGDTFEQMSSVLRDALDEFFPAGNGIDIIAEPGRYYVST 303

Query: 241 TTTLNTTVLD---------------ISENIKNLVIVDSSVEAHVPDYL----------LY 275
             T+   ++                +  N        S +  H                 
Sbjct: 304 AFTIACNIIARRTVEDPTLDGKGYMVYINDGVYGNFSSIMFDHQHPVAKILRSNGRTLYN 363

Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFEDVAGYNINRKNWF 334
             SA            V G +C   D   E   FE  + +GD + FED+  Y       F
Sbjct: 364 TASANACNAGEGVEYSVWGPTCDGIDRISESIRFETILNVGDWLYFEDMGAYTKCSATQF 423

Query: 335 NGI 337
           NG 
Sbjct: 424 NGF 426


>gi|313229650|emb|CBY18465.1| unnamed protein product [Oikopleura dioica]
          Length = 435

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 67/399 (16%), Positives = 124/399 (31%), Gaps = 44/399 (11%)

Query: 3   KTPYY-LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++P   L D + L            +       A+K     G+         G  ++S+ 
Sbjct: 31  ESPVLDLYDLEGLRGRFKEVQDALPSWNH--AFAIKTNPIRGVMLEAKNCGLGAEAASIG 88

Query: 62  EVMLGHE-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK-- 117
           E+    +  F      Y +       +   L+    I  + + ++ K       L+    
Sbjct: 89  ELEHALQLGFDRSKIVYDSPVKTKAHLKHALNAGVVINLDNLEEIEKVNQLLPDLNVDVT 148

Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLG-------EKCKDKIESEIKNVNGLMFHNNCE 168
             IG+R+NP+V   K  ++      S+ G       E    KI  E   + GL  H   +
Sbjct: 149 GKIGMRVNPNVGAGKIAMSSTAGKSSKFGLPMTGEFEDEVVKIILENSWIQGLHQHIGSQ 208

Query: 169 NKSFLCFSAMLKNIEKEFGHFI-----TQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223
             S    +  ++ +              QI++I +GGGI    +    K       +   
Sbjct: 209 GISLDQLTLGVERLVALARKINELAGTKQIKYIDVGGGIPTDYESDNEKVAYAEYAKLVN 268

Query: 224 KY-----SVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLL--- 274
           +          + E G ++VT      + V  +     +  V+        + +  L   
Sbjct: 269 ERVPNLDEFNFHSEFGRSLVTKYAISVSKVETVKTWGDRITVLTHFGSNQFLREVYLPDT 328

Query: 275 YQESATIYPNTGPYTA------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
           +    ++    G           V G  C  GD   +      +K GD I   D+ GY  
Sbjct: 329 WFHRMSVLDQNGDPKVSDLIEQDVGGPLCFQGDYLAKARALPEIKPGDYIVMHDIGGYTY 388

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367
              + FN I  P +   +            Y  + +  S
Sbjct: 389 ALYSRFNSIQAPAVYGYDASENF-------YE-FKSRES 419


>gi|319408973|emb|CBI82632.1| lysine/ornithine decarboxylase [Bartonella schoenbuchensis R1]
          Length = 377

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 54/357 (15%), Positives = 110/357 (30%), Gaps = 29/357 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   +  N          +  ++  A+K   A  +   L        ++S+ E+ 
Sbjct: 18  PCLIVDLDVVRENYLNFEKALPQS--RIFYAIKANPAPEILSLLTSLGSSFDAASVAEIK 75

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +  E     E  ++    K     A            + V ++ K    A        + 
Sbjct: 76  MALEAGATAERISFGNTIKKERDIAYAHTLGISLYAVDCVEEVEKIARAAPGARVFCRIL 135

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA---M 178
            N   +           P   +    +           G+ FH   +      +      
Sbjct: 136 TNGEGAEWPLSRKFGCVPDMAVDVLRR--AHQLGLQAYGVSFHVGSQQTHLNAWDHALSD 193

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLE 232
           +  + +       Q++ +++GGG                      LK++      +  +E
Sbjct: 194 VALVFERLEKEGIQLKLVNMGGGFPARYLKEVPTAQVYGIAIFDSLKKYFGNRIPETIIE 253

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPN 284
           PG AIV N   + T V+ IS+   N  I          + +   + + + Y    TI+ +
Sbjct: 254 PGRAIVGNAGVIRTEVVLISKKADNDNIRWVYLDVGKFNGLAETMGEAIRYP-IETIHDD 312

Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337
                 ++ G +C + D+  E   +     + IGD +       Y     +  FNG 
Sbjct: 313 KAMEPCILAGPTCDSADVMYEKTPYLLPLSLTIGDELLIHGTGAYTTTYASVAFNGF 369


>gi|237801422|ref|ZP_04589883.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2
           [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|330873453|gb|EGH07602.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2
           [Pseudomonas syringae pv. morsprunorum str. M302280PT]
 gi|330965275|gb|EGH65535.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2
           [Pseudomonas syringae pv. actinidiae str. M302091]
 gi|331024281|gb|EGI04338.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2
           [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 387

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 54/361 (14%), Positives = 114/361 (31%), Gaps = 30/361 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+ +ID   +    D      +    K+  A+K   A  + + L         +S+YE
Sbjct: 25  ETPFVVIDTAIISKAYDDLRAGFEF--AKVYYAVKANPAVEVINLLKDKGSSFDIASIYE 82

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +        G E  +Y    K  +               ++ + L      A      + 
Sbjct: 83  LDKVMSCGVGPERMSYGNTIKKSKDIRYFYEKGVRLFATDSEADLRNIAKAAPGSKVYVR 142

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177
           +        +        +   +        I +    +   G+ FH   + +    + A
Sbjct: 143 ILTE---GSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDA 199

Query: 178 MLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSV 227
            +  ++  F          ++ I++GGG                ++  + LKE       
Sbjct: 200 AIAKVKVIFERLKEEDGIVLKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDDLP 259

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIY 282
           +I LEPG ++++N   L + V+ ++        + +          +       +     
Sbjct: 260 EIILEPGRSLISNAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIETMDEAIKFPIWT 319

Query: 283 PNTGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337
              G     ++ G +C + DI  E +       + IGDR+ +     Y  +     FNG 
Sbjct: 320 EKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRMYWLSTGAYTTSYSAVEFNGF 379

Query: 338 N 338
            
Sbjct: 380 P 380


>gi|119384035|ref|YP_915091.1| Orn/DAP/Arg decarboxylase 2 [Paracoccus denitrificans PD1222]
 gi|119373802|gb|ABL69395.1| Orn/DAP/Arg decarboxylase 2 [Paracoccus denitrificans PD1222]
          Length = 414

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 45/392 (11%), Positives = 99/392 (25%), Gaps = 40/392 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+     +   L             +  A+K      +   +   +D    SS  E
Sbjct: 20  GTPAYVYATDVVEERLAHLRAHLGR-WFAVSFAVKSNPNPALLGWMRDRLDYLDISSGGE 78

Query: 63  VMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + LG E  +     ++      +     A+ +    ++  ++ +       A ++ +   
Sbjct: 79  LALGREAGWDAARISFTGPAKREAELRAAIEAGLGELVLESLREARLADAVAAEMGRVQP 138

Query: 120 LRINPSV-SYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKS 171
           + +  +     K          S  G   +D  E   +        + GL  ++  +   
Sbjct: 139 VLVRLAPARVPKGFGDQMAGRPSPFGVDVEDAAEILPQIAALPNLRIIGLHIYSGTQCLK 198

Query: 172 FLCFSAMLKNIEKEFGHFITQIEWI----SLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
                   +   + F      ++        G G+               +         
Sbjct: 199 PEAICENWRIFMQVFRDTCAALDLRPEKLIFGAGLGIPYHPGDSALDLAAIAAEIGPELD 258

Query: 228 QI-----------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSV----------- 265
                         LE G  +V       T VL + ++    + +               
Sbjct: 259 AFRAEPRLADARLVLELGRYLVGPAGWFVTRVLSVKQSRGTRIAICDGGLNDNLAASGNF 318

Query: 266 -EAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
                 +Y++++               + G  C + D  G       ++ GD I+     
Sbjct: 319 GMVLRRNYVMHRVGGDEDGTRPEEKQDISGPLCTSIDKLGGGVALPRLEEGDLIAIHACG 378

Query: 325 GYNINRKN-WFNGINMPTIAVKNVDGTIKAIR 355
            Y        F    MP   +          R
Sbjct: 379 AYGPTASPLHFISHPMPAEVLLTGGQMQDVTR 410


>gi|269139319|ref|YP_003296020.1| putative diaminopimelate decarboxylase [Edwardsiella tarda EIB202]
 gi|267984980|gb|ACY84809.1| putative diaminopimelate decarboxylase [Edwardsiella tarda EIB202]
 gi|304559225|gb|ADM41889.1| Vibrioferrin decarboxylase protein PvsE [Edwardsiella tarda FL6-60]
          Length = 390

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 59/354 (16%), Positives = 104/354 (29%), Gaps = 32/354 (9%)

Query: 4   TPY--YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           TP+  YL D   L   + T   +      +L  A K  A   +  TL  ++DG  ++S  
Sbjct: 17  TPFCGYLYDLSALRERIATMKRLLPE-HCELFYAAKANAEAPILHTLAPWVDGFEAASGG 75

Query: 62  EVM-LGHEKFGGETHAYNVAYKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+  L  +                E++       D +   ++ +L +    A++  + + 
Sbjct: 76  ELAWLAQQSLDSRLLFGGPGKLTRELEQACDLRVDALHVESLGELRRLAALAERRRQTLP 135

Query: 120 LRINPSVSYSKFILA--DPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           L +  ++                +  G    D   +           + G  FH      
Sbjct: 136 LLLRMNIPLPGGAETPLMMGGKPTPFGLDPADLAPALRLIGDARWLRLRGFHFHLLSHQL 195

Query: 171 SFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQ---RLK 219
           S           L  +++    F  QIE ++LGGG         + +   DFCQ    ++
Sbjct: 196 SVDSHLALIQHCLTQVQRWCQQFHLQIEMVNLGGGFGINYRDPARHFDWADFCQRLPAVR 255

Query: 220 EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQES 278
                    +  E G  I          VLDI  N+     V      H         + 
Sbjct: 256 RACRADPWLLRFECGRYISAPCGYYVMEVLDIKRNLGEWFAVGHGGTHHFRTPAAQGHDH 315

Query: 279 ATIYPNTG------PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
                              + G+ C   D+         +  GD + F     Y
Sbjct: 316 PFQVVRRDTPPEIRDRRVTLVGQLCTPKDVLARRQPIAALATGDWLVFPLAGAY 369


>gi|149187276|ref|ZP_01865574.1| diaminopimelate decarboxylase [Vibrio shilonii AK1]
 gi|148838812|gb|EDL55751.1| diaminopimelate decarboxylase [Vibrio shilonii AK1]
          Length = 541

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 56/417 (13%), Positives = 123/417 (29%), Gaps = 56/417 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK---LLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            +P +++ +  L  NL        N   K   ++ A+K    + +    N+   G     
Sbjct: 70  GSPLFVLSEDTLRGNLRRVKAAFGNYWPKPVNVMFAIKSNTNFAVRAICNEEGVGGDCFG 129

Query: 60  LYEVMLGH-EKFGGETH-AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             EV   H      +T         +  I   +     I  ++  ++   +  A+++  +
Sbjct: 130 PGEVEATHIAGADPKTIALNGTVKPELAIRKAIEYGYAIHLDSYEEIEIVERIAREVKPE 189

Query: 118 IGLRI-------------NPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------KN 157
             +RI             N S     F        + + G   ++  +            
Sbjct: 190 DKVRIAVRLKVLPDDFFDNFSPDAYPFPDFKGAMKWIKFGLLREEAKKIVNRVKEIDIFE 249

Query: 158 VNGLMFHNNCENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP--- 210
             G   H    +K        +    K++ +       Q   + LGGG     +      
Sbjct: 250 FYGFHTHLGRFSKDPAGWDALYRQYAKDVIEISRACDVQPFQVDLGGGWPREREPECRSK 309

Query: 211 -VKDFCQRLKEFSEKYS--------------VQIYLEPGEAIVTNTTTLNTTVLDISENI 255
                   ++++++                  Q++LEPG  I  N  TL T+V  + ++ 
Sbjct: 310 EHMMNANTIEDYAKVVCAGMLDEFNRAGFDIPQLWLEPGRYIAGNIGTLLTSVYVVKDDQ 369

Query: 256 KNLVIVDSSVEAHVPDY--------LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFH 307
           +          +                  +  +       T  + G  C+   I+    
Sbjct: 370 EMDYTYTMVDASTYLATLVESQESKNPVLPANKMTQPVVAKTTEIAGPICIPS-IWESGA 428

Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
               ++  D ++  DV  Y  ++ + FN +  P   +     +    R  +  D + 
Sbjct: 429 TMPELQPKDVLAIMDVGHYAESQASQFNSLPRPATVLVKDGQSELIKRAETVEDVFA 485


>gi|104780253|ref|YP_606751.1| ornithine decarboxylase [Pseudomonas entomophila L48]
 gi|95109240|emb|CAK13937.1| putative ornithine decarboxylase [Pseudomonas entomophila L48]
          Length = 387

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 56/359 (15%), Positives = 119/359 (33%), Gaps = 26/359 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+ LID Q +    D      +    K+  A+K   A  + D L +       +S+YE
Sbjct: 25  ETPFVLIDTQMISQAYDDLRAGFEF--AKVYYAVKANPAVEIIDLLKEKGSSFDIASIYE 82

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +          +  +Y    K  +           ++ T S+ +  ++ A+         
Sbjct: 83  LDKVMGRGVSADRISYGNTIKKSKDIRYFYEKGVRLYATDSEAD-LRNIAKAAPGSKVYV 141

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179
              +   +        +   +        I +    +   G+ FH   + +    + A +
Sbjct: 142 RILTEGSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDAAI 201

Query: 180 KNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSVQI 229
             ++  F         +++ I++GGG                ++  + LKE       +I
Sbjct: 202 AKVKVIFERLKEEDGIELKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDDLPEI 261

Query: 230 YLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
            LEPG +++ N   L + V+ ++        + +          +       +       
Sbjct: 262 ILEPGRSLIANAGILVSEVVLVARKSRTAVERWIYTDVGKFSGLIETMDEAIKFPIWTEK 321

Query: 285 TGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338
            G     ++ G +C + DI  E +       + IGDR+ +     Y  +     FNG  
Sbjct: 322 NGEAEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLYWLSTGAYTTSYSAVEFNGFP 380


>gi|120553020|ref|YP_957371.1| ornithine decarboxylase [Marinobacter aquaeolei VT8]
 gi|120322869|gb|ABM17184.1| ornithine decarboxylase [Marinobacter aquaeolei VT8]
          Length = 391

 Score =  149 bits (376), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 56/359 (15%), Positives = 118/359 (32%), Gaps = 26/359 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+ +ID Q +    +  +        K+  A+K   A  + + L         +S+YE
Sbjct: 29  ETPFVVIDTQTIDRQYEELVEGFPY--AKVYYAVKANPAPQILNMLRDKGANFDIASVYE 86

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +         G+  +Y    K  +           ++ T S+ +  ++ A+         
Sbjct: 87  LDKVMALGVTGDRISYGNTIKKAKDIRTFYEKGVRLYATDSEAD-LRNIAKAAPGSKVYV 145

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179
              +            +   +        I +    +   G+ FH   + +    + A L
Sbjct: 146 RILTEGTLTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGVSFHVGSQQREIGAWDAAL 205

Query: 180 KNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSVQI 229
             ++  F         +++ I++GGG                ++  + L E       +I
Sbjct: 206 NKVKVIFERLKEEDGIELKMINMGGGFPANYITRTNELGVYAEEIARFLHEDFGDDLPEI 265

Query: 230 YLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
            +EPG ++++N   L + V+ IS        + +          +       +       
Sbjct: 266 IIEPGRSLISNAGVLVSEVVLISRKSRTALHRWVFTDVGKFSGLIETLDESIKFPIWTEK 325

Query: 285 TGP-YTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRKN-WFNGIN 338
           +G     ++ G +C + DI  E H       + IGDR+ +     Y        FNG  
Sbjct: 326 SGEGEDCVIAGPTCDSADIMYEHHKYPLPLNLAIGDRMYWLSTGAYTTTYSAIEFNGFP 384


>gi|262376838|ref|ZP_06070065.1| predicted protein [Acinetobacter lwoffii SH145]
 gi|262308183|gb|EEY89319.1| predicted protein [Acinetobacter lwoffii SH145]
          Length = 397

 Score =  149 bits (376), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 71/385 (18%), Positives = 127/385 (32%), Gaps = 25/385 (6%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           TP Y+++K+ L N++   +        K  L  +LK  +   +   +          S  
Sbjct: 6   TPAYVLNKESLRNSIKKIIDSLNKNFNKNILSYSLKTNSLPYILKEIKDLGGYAEVVSSD 65

Query: 62  EVMLG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E  L     F      YN            L     +   T  ++   K   +     +G
Sbjct: 66  EYELAKLVGFKTNKIVYNGPLKCKDTFLEALIGGSILNIETYREIEWLKLLPKNKTFNVG 125

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNNCENK 170
           +RIN  +       +  +  +SR G             +  +     ++GL  H     +
Sbjct: 126 IRINIDLKEISPEDSKEDEDYSRFGFSYYTGELKKAIDEISKIGNIKIDGLHAHRTTLTR 185

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEFSEKY 225
           S  C+  + + I      F   + +I +GGG +      P       +    L  + +  
Sbjct: 186 SINCYKKICEFIGLISNKFDLNLSYIDIGGGYYGIMNSKPTFDEYFSEIANSLSRYFDLD 245

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285
              I +EPG AIV +     T+V+D+ +N    VI        V  +           + 
Sbjct: 246 KTVIIVEPGNAIVASCFDFITSVIDVKKNRDFYVITTDGSRNDVDPFFKKSTYFYELLHE 305

Query: 286 GPYTAM------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
               +       +CG +CL  D          + +GD+I F+ V  Y +     F     
Sbjct: 306 TKKKSDVVSLQKICGCTCLEYDKLFTIENSHLLSVGDKIVFKSVGAYTMALSPLFIRF-F 364

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
           P I + +          +S  D+YN
Sbjct: 365 PKIYLLDESQYTLIRDNWSAKDFYN 389


>gi|156040381|ref|XP_001587177.1| hypothetical protein SS1G_12207 [Sclerotinia sclerotiorum 1980]
 gi|154696263|gb|EDN96001.1| hypothetical protein SS1G_12207 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 441

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 59/363 (16%), Positives = 99/363 (27%), Gaps = 37/363 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++        + R    VK   A+KC     +   L +   G   +S  E+  
Sbjct: 64  FFVADLGEVYR--QHMRWKRNLPRVKPFYAVKCNPDPQVIRLLAELGTGFDCASKGEIEQ 121

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             +         Y    K        +          +     K K      ++ LRI+ 
Sbjct: 122 ILKTGIDPARIIYAQPCKTNSYVRYAAKQGVKQMTFDNSDELHKIKKLFPGAELFLRIST 181

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S S   L+                      NV G+ FH        L F   +++   
Sbjct: 182 DDSSSLCQLSLKFGATMDTTSDLLALARELDLNVVGVSFHVGSGASDPLAFREAVQDAHT 241

Query: 185 EFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV---QIYLEPGEAIV 238
            F     +   +  + +GGG          +     L +  E+Y     +I  EPG   V
Sbjct: 242 VFEQARTYGYYMHTLDVGGGF----CSETFEKMAAALNDALEEYMPKNIKIIGEPGRYYV 297

Query: 239 TNTTTLNTTVLDISENIKN---------------LVIVDSSVEAHVPDYLLYQESATIYP 283
            N  TL   V+                            S +  H         +     
Sbjct: 298 ANAFTLACNVIARRTVEDPVSTEKSYMLYLNDGLYGNFSSIMFDHQNPIAQVLRTGKRSY 357

Query: 284 NT--------GPYTAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                     G     + G +C   D       F+  + +GD + FE +  Y       F
Sbjct: 358 FDTLASQATLGGTEYSIWGPTCDGIDRISASIRFDHNLDVGDWLYFEGMGAYTKCSATRF 417

Query: 335 NGI 337
           NG 
Sbjct: 418 NGF 420


>gi|291289439|emb|CBK55649.1| ornithine decarboxylase [Metarhizium anisopliae]
          Length = 447

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 58/363 (15%), Positives = 103/363 (28%), Gaps = 33/363 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++        + +    +K   A+KC     +   L +   G   +S  E+  
Sbjct: 66  FFVADLGEVYR--QHLRWKKNLPRIKPFYAVKCNPDPKVLRLLAELGAGFDCASKGEIEQ 123

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    +       + N         +    +K        ++ LRI  
Sbjct: 124 VLAMGTTPERIIYAQPCETNSYVRFVKNAGVKQMTFDNADELYKIAKLYPEAELFLRIMT 183

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN---KSFLCFSAMLKN 181
             + S   L+          E      ++   NV G+ FH         +F         
Sbjct: 184 DDASSLCRLSMKFGATMDTTESLLAVAKNLGLNVVGVSFHVGSGASDPLAFYKAVRDAHA 243

Query: 182 IEKEFGHFITQIEWISLGGGI-HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
           + ++   F   +  + +GGG    T +           + F     + I  EPG   V+ 
Sbjct: 244 VFQQAAEFGFTMRTLDVGGGFCGDTFEQMSSVLRDALDESFPAGNGIDIIAEPGRYYVST 303

Query: 241 TTTLNTTVLD---------------ISENIKNLVIVDSSVEAHVPDYL----------LY 275
             T+   ++                +  N        S +  H                 
Sbjct: 304 AFTIACNIIARRTVEDPTLDGKGYMVYINDGVYGNFSSIMFDHQHPVAKILRSNGRTLYN 363

Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFEDVAGYNINRKNWF 334
             SA            V G +C   D   E   FE  + +GD + FED+  Y       F
Sbjct: 364 TASANACSAGEGVXYSVWGPTCDGIDRISESIRFETILNVGDWLYFEDMGAYTKCSATQF 423

Query: 335 NGI 337
           NG 
Sbjct: 424 NGF 426


>gi|302529561|ref|ZP_07281903.1| diaminopimelate decarboxylase [Streptomyces sp. AA4]
 gi|302438456|gb|EFL10272.1| diaminopimelate decarboxylase [Streptomyces sp. AA4]
          Length = 404

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 60/384 (15%), Positives = 112/384 (29%), Gaps = 33/384 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D   +       L+     G  +  ALK      +   L +       SS  E
Sbjct: 12  GTPAYVYDLD-VTAQSRDQLFGLLPEGFAVYYALKANPHPEIARELREGGCRAEISSTGE 70

Query: 63  VMLGH-EKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +       F  E   Y    K       A+ +        +++ L      A++     +
Sbjct: 71  LANALTAGFAPEDILYTGPGKTDGELAAALAAGVRLFSVESLTDLQHVGAAAERQDTVAR 130

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNCENK 170
             LR+N +   +   +    RP    G   +   E            + G  F      +
Sbjct: 131 CLLRVNTTQGSASTGIRMMGRPSQ-FGVDAETLPELMPLFKAVGGTKIVGAHFFTMSNAQ 189

Query: 171 SFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFS 222
                 A  + + +            +E + +GGG         +          L++  
Sbjct: 190 DEDALLAEYEFVLQSAAQLRQETGLPLELLDIGGGFSSPYAVPGERTDYPKLRNGLEQLL 249

Query: 223 EKYSVQI-------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIV---DSSVEAHVPDY 272
           + Y  +          E G  +     TL   V+++ E+  +  ++     +V   +   
Sbjct: 250 DLYLPEWRSGEVELACESGRYLSGTCGTLLAGVVNVKESRGHRFVILDAGINVVGGLSGI 309

Query: 273 LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK- 331
                +A      G     + G  C  GD   +      +  GD ++  +V  Y +    
Sbjct: 310 GRLLPAAVGVEQVGDNPGQLVGPLCTPGDSLSKAAKLPELAAGDLLTVPNVGAYGVTASL 369

Query: 332 NWFNGINMPTIAVKNVDGTIKAIR 355
             F G   PT  V   D  +   R
Sbjct: 370 ISFLGRPAPTEVVVRGDEVVSVSR 393


>gi|119468765|ref|ZP_01611817.1| diaminopimelate decarboxylase [Alteromonadales bacterium TW-7]
 gi|119447821|gb|EAW29087.1| diaminopimelate decarboxylase [Alteromonadales bacterium TW-7]
          Length = 407

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 56/357 (15%), Positives = 110/357 (30%), Gaps = 17/357 (4%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D + +              GV L  ALK      +  TL +       ++  EV 
Sbjct: 45  PLMVLDCEAIRRQYHALKNAL--PGVVLHFALKPLPLAAVVRTLLEEGASFDLATSGEVD 102

Query: 65  L-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           L   +    E   +    K              +F   +     K  A K   +I +R++
Sbjct: 103 LVASQGVPSERTIHTHPIKRDSDIRDALAYGCTVFVVDNINELEKFIAYKGQAEILVRLS 162

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
                +   L+                 +     + GL FH   ++ +   +   +    
Sbjct: 163 FRNKDAFADLSKKFGCSPDAAIDIISYAQQLGIRIKGLSFHVGSQSPNPTKYVEAINACA 222

Query: 184 KEFGHF----ITQIEWISLGGGIHFTDKDY--PVKDFCQRLKEFSEKYS--VQIYLEPGE 235
           K         +  +  + +GGG          P+  FC  +     +    +QI  EPG 
Sbjct: 223 KVINKVSELGLPALSTLDIGGGFPVPYSADVLPINVFCAPINVALAQLPETMQIIAEPGR 282

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGPYTA 290
            IV ++ T   +V+  ++               S    + D   Y    +   +   + +
Sbjct: 283 FIVASSVTSVASVMGQAQREGRTWYYLDDGIYGSFSGLMFDEAAYP-IDSAKQDGERFES 341

Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
           ++ G +C + D+  +      +  GD I    +  Y +     FN      + V N 
Sbjct: 342 VLAGPTCDSIDVVSDSIMLPKLNNGDLIISRMMGAYTLATATDFNFFKRAEVIVLNE 398


>gi|302854271|ref|XP_002958645.1| hypothetical protein VOLCADRAFT_84542 [Volvox carteri f.
           nagariensis]
 gi|300256034|gb|EFJ40311.1| hypothetical protein VOLCADRAFT_84542 [Volvox carteri f.
           nagariensis]
          Length = 562

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 54/378 (14%), Positives = 104/378 (27%), Gaps = 32/378 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV-M 64
           +Y++D   +               V    A+KC    G+   L     G   +S  E+ M
Sbjct: 177 FYVVDLANVQRMFKAWRAAMPR--VMPYYAVKCNPEPGILKLLVAMGAGFDCASKGELDM 234

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
           +           +    K         +         +    +K        K  LRI  
Sbjct: 235 MLRMGVSPSRIIFAHPCKRASDIRYARDHGIQYTTFDTVSELYKISQMNPDFKCVLRIRA 294

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
               ++  L                  +    +V G+ FH     ++   FS  ++N  K
Sbjct: 295 DDPDARVPLGLKYGAEVSEAPVLLQTAKDLGLHVVGVSFHVGSACQNLSTFSGAIENARK 354

Query: 185 EFGHF---ITQIEWISLGGG---IHFTDKDYPVKDFCQRLKEFSEKYSVQ-----IYLEP 233
            F         +E + +GGG         +    +    +      +        +  EP
Sbjct: 355 VFDEAHTLGFHMELLDIGGGFTGHFDEMGNVMFGEIANTINTALAAHFPPEMGVRVIAEP 414

Query: 234 GEAIVTNTTTLNTTV----------LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
           G      ++TL T V            + ++      +  S    + D           P
Sbjct: 415 GRYFAETSSTLLTPVYGQRDRVAHDGAVKKDYWLTDGLYGSFNCILYDGQSPAYKVVRSP 474

Query: 284 NTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG- 336
                     +T+ + G +C + D   +      ++ GD + + +   Y +     FNG 
Sbjct: 475 LLPEPADIRTFTSTLWGPTCDSADCVYKDVQLPVLRNGDWLMWNNAGAYTVAGACDFNGI 534

Query: 337 -INMPTIAVKNVDGTIKA 353
               P       D  +  
Sbjct: 535 EFTTPGKLYVWSDSAVDV 552


>gi|303325885|ref|ZP_07356328.1| diaminopimelate decarboxylase [Desulfovibrio sp. 3_1_syn3]
 gi|302863801|gb|EFL86732.1| diaminopimelate decarboxylase [Desulfovibrio sp. 3_1_syn3]
          Length = 406

 Score =  149 bits (375), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 56/392 (14%), Positives = 120/392 (30%), Gaps = 53/392 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y+ D++ +   +     I    G  +L ++KC +   +   +     G  ++S  EV+
Sbjct: 16  PLYVYDRKAISGRIARLRDIFN--GFDILYSMKCNSNREICRHMADCGAGIDAASKNEVL 73

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKIGLR 121
             H      E   ++   K  +      +   II ++ ++L +       + +   +GLR
Sbjct: 74  TAHALGVPREKILFSAPGKSDDDLRETLDNCLIIADSYTELQRIDAICASRNITCAVGLR 133

Query: 122 INPSVSYSKFILA-DPNRPFSRLGEK------CKDKIESE-IKNVNGLMFHNNCENKSFL 173
           +NP  SY              + GE        +D +         G+  H   +  S  
Sbjct: 134 VNPDFSYGSGPCPAMRPGLPDKFGEDEEGLPAHRDFLHRLEHARPTGIHVHARSQVLSAD 193

Query: 174 CFSAMLKNIEKEFGHFIT----QIEWISLGGGIHFTDKDYPVKDFCQRLKEFS------- 222
                 +++ +    +       +E+I  GGG+             +RL+          
Sbjct: 194 ALGRCFEHVARLARVWNHGLGMPLEFIDFGGGLGIPYAGEMRSLNMERLRGHLAGLLRLI 253

Query: 223 ---EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS-VEAHVPDYLLY--- 275
                   + Y+E G  +V +     T ++DI  +     ++ +  +   +   +     
Sbjct: 254 PQDGPVPARRYVESGRFLVGDAGVFVTRIVDIKRSRGKTFVIAAGLLNHFLRPAIAGLFE 313

Query: 276 -------QESATIYPNTGPYTA--------------MVCGRSCLAGDIFGEFHFEKPVKI 314
                           +G  T                +CG  C   D        +   +
Sbjct: 314 ALPLEPTYAGPCEPLWSGRGTYVPKALGLPAPAEIVTICGNLCTGMDTVARDVVLENAVV 373

Query: 315 GDRISFEDVAGYNINRKNW-FNGINMPTIAVK 345
           G+ + FE+   Y        F+        + 
Sbjct: 374 GNMLIFENAGAYAAALSPHGFSSHPEAREFLW 405


>gi|85708790|ref|ZP_01039856.1| ornithine/diaminopimelate/arginine decarboxylase, family 2
           [Erythrobacter sp. NAP1]
 gi|85690324|gb|EAQ30327.1| ornithine/diaminopimelate/arginine decarboxylase, family 2
           [Erythrobacter sp. NAP1]
          Length = 410

 Score =  149 bits (375), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 43/375 (11%), Positives = 95/375 (25%), Gaps = 34/375 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP ++  +  L               + +  A+K      +   +   +DG   +S  E+
Sbjct: 37  TPLFVYSRSHLDLRTAELRAALPKR-IGVNFAVKANPHPAVIAHMAPLVDGFDVASSGEL 95

Query: 64  MLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
               E        ++     +D E++A +    T+   +  +  +    AQ++     + 
Sbjct: 96  AKLQETGIDPSRVSFAGPGKRDDELEAAIVAGATLNCESEGEGERALAIAQRVGTAPRIA 155

Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCKDKIESEIKNVNG------LMFHNNCENK---- 170
           I  +     K             G   +         ++G      L      +      
Sbjct: 156 IRVNPDFELKGSGMKMGGGAKPFGVDAERVPALAQTLIDGGAEWRGLHIFTGSQALSADA 215

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY----- 225
                  ++    +        +  +++GGG                +    ++      
Sbjct: 216 IIEAQGNVIDLAARISNDIGEGLPKLNMGGGFGIPYFPGDEPLDLPAVGNALKERTADLP 275

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY--------- 272
                 ++ LE G  +V         V+D   +     +V      H             
Sbjct: 276 ESLSDTELCLELGRYLVGEAGVYLCRVIDRKVSHGVTYLVTDGGLHHQLAASGNFGTVVR 335

Query: 273 -LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                  A  +   G     V G  C   D   +       ++GD ++      Y     
Sbjct: 336 RNYPVAIANRFGCEGDDVVNVVGCLCTPLDRLADAALLPRAEVGDLVAVFCAGAYGATAS 395

Query: 332 N-WFNGINMPTIAVK 345
              F G       + 
Sbjct: 396 PENFLGHGPAAEMLV 410


>gi|195474574|ref|XP_002089566.1| GE19169 [Drosophila yakuba]
 gi|194175667|gb|EDW89278.1| GE19169 [Drosophila yakuba]
          Length = 394

 Score =  149 bits (375), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 54/357 (15%), Positives = 98/357 (27%), Gaps = 23/357 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
             + D   L   L     +     ++   A+KC     +   L     G   +S  E+ L
Sbjct: 33  LNICDLSSLERKLRLWHKLMPR--IEPHYAVKCNDDPVVVKFLADLGTGFDCASKNELKL 90

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   +    +             +     ++   +K K       + +R   
Sbjct: 91  VLGFGVSPERIIFAHPCRPASHLKYAKEQQVVNGTVDNEYEVYKLKKHYPGSNLIVRFKS 150

Query: 125 S-VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
                   +                   ++    V G  FH          +   ++  E
Sbjct: 151 EAKKALCPLGDKYGCDAESDAAALMLLAKALDLKVTGTSFHVGSGCSEVEAYDRAIERAE 210

Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEKYSVQIYLEPGEAI 237
             F        ++E + +GGG    D D   K        L        V+I  EPG   
Sbjct: 211 SIFKVGEFVGHKMEMLDIGGGFPGIDDDMFEKIAQAVNTSLDLCFPDERVRIISEPGRFF 270

Query: 238 VTNTTTLNTTV---LDISENIKNLVIVDSSVEAHVP----DYLLYQE------SATIYPN 284
           V    TL   V    ++      L  +   +   +         Y E            +
Sbjct: 271 VEAAYTLICKVHAKREVRGKDGKLDTMMYYLNDGIFGAFAAMFYYPEELTPVLYLDDAES 330

Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                +++ G SC A D          +  GD + F ++  Y +   + FNG ++P 
Sbjct: 331 LPKLKSVIWGPSCDALDKILGDLLLPNLNPGDLLGFHNMGAYTMPIASPFNGFDVPE 387


>gi|307320235|ref|ZP_07599654.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Sinorhizobium meliloti AK83]
 gi|306894114|gb|EFN24881.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Sinorhizobium meliloti AK83]
          Length = 408

 Score =  149 bits (375), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 46/376 (12%), Positives = 105/376 (27%), Gaps = 35/376 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP++  D++ + + +     +   + + L  A+K      +   L + +D    +S  E
Sbjct: 33  GTPFFAYDRRLITSRVKFLRSVLP-SDIHLSYAVKANPMPAVVQHLARLVDAFDVASTTE 91

Query: 63  VMLGHEKFGGETHAY--NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           +    +     +H           E+   ++   TI   + ++  +  +   +L  +  +
Sbjct: 92  MKTALDTPTPASHISFAGPGKTVVELTQAVAAGVTIEIESPTEAARVVEVGSRLGIRPRV 151

Query: 121 RINPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173
            +  +     K           + G   ++       + +   +  G    +  +N    
Sbjct: 152 ALRINPDFQIKGSGMRMGGGPQQFGIDVEEIPSLLQKLAAAELDFLGFHVFSGSQNLHAD 211

Query: 174 CFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                            G     + +++LGGG      +         +           
Sbjct: 212 ILCEASAKHVSLLIRLAGECPWPVRYLNLGGGFGIPYFEKDRPLDLLAIGATLSDLMECA 271

Query: 229 ---------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY------- 272
                    + +E G  +V  +    T V+D   +   + +V      H           
Sbjct: 272 VRPNLPDARVVIELGRYLVGESGVYVTRVVDRKVSRGKVYLVVDGGLHHQLAASGNFGQV 331

Query: 273 ---LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
                    A     T      V G  C   D+ G+        IGD +       Y + 
Sbjct: 332 IRRNYPIAVANRMKETELENVSVVGCLCTPLDMLGDNITLPRADIGDLLVVFQAGAYGLT 391

Query: 330 RKNW-FNGINMPTIAV 344
                F G  +P   +
Sbjct: 392 ASPTAFLGHPLPVEIL 407


>gi|237726405|ref|ZP_04556886.1| diaminopimelate decarboxylase [Bacteroides sp. D4]
 gi|229434931|gb|EEO45008.1| diaminopimelate decarboxylase [Bacteroides dorei 5_1_36/D4]
          Length = 389

 Score =  149 bits (375), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 70/389 (17%), Positives = 145/389 (37%), Gaps = 27/389 (6%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
           M KTPYYL+D+ KLL+N ++     +      K+  + K      + + + ++       
Sbjct: 1   MNKTPYYLLDEDKLLSNFESMKRAFEKLWPNFKIAYSYKTNNLPWLVNWMKEHGALAEVV 60

Query: 59  SLYEVMLG-HEKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLN--KFKDKAQKL 114
           S  E  L            YN        +D  + N   +  +  S++        +++ 
Sbjct: 61  SYPEYKLAQRVGNKISNIVYNGPNKNFEGLDEAVLNGAIVNLDNFSEIEHLLLFSSSKRA 120

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHN 165
             K+GLRIN  +         P +   R G   ++                ++ GL  H+
Sbjct: 121 KIKVGLRINFDLESYCPNETIPGKEPGRFGFNIENGDLQKAISLLSSIPNVSIVGLHGHH 180

Query: 166 NCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF-----CQRLKE 220
           +   KS   F  + + +  +  + +++IE++ +GG +       P  D          K 
Sbjct: 181 STRTKSLKIFKTIAEQM-CQMANHLSKIEYLDMGGCLFGDKPGAPTFDEYASTIVNVFKH 239

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-PDYLLYQESA 279
           +       + +EPG A+V +  +   +VL + +     ++       H+ P     +  +
Sbjct: 240 YQIPSKTLLIMEPGAALVASPFSYVCSVLAVKDIQTTRLVFTDGSVKHIAPQMNAVRFMS 299

Query: 280 TIYPNTGPYTAM--VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
           ++   +    A   V G +C+  D F E    + ++IGD I   +   Y+++    F   
Sbjct: 300 SVQTTSTKIIARQVVSGYTCIENDRFLELIDCQELQIGDTIQIYNTGAYSLSLSPLFIEY 359

Query: 338 NMPTIAVKNVDGTIKAIRE-FSYNDYYNN 365
             P   +       K +RE +  +++   
Sbjct: 360 -YPK-VIVKNGLRHKIVREAWDIDEFMQK 386


>gi|33945618|emb|CAD91350.1| ornithine decarboxylase [Glycine max]
          Length = 434

 Score =  149 bits (375), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 46/362 (12%), Positives = 106/362 (29%), Gaps = 29/362 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I +P+ ++D   ++  +D   +  K   V+   A+KC     +   L         +S  
Sbjct: 57  IDSPFSVLDLGVVMGLMD--KWACKLPTVQPFYAVKCNPNLSLIGALAALGSSFDCASKA 114

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+          +   Y    K             +   ++++ ++ K ++        +
Sbjct: 115 EIESVLSLGVSPDRIIYANPCKSESHIRYAASVGVNVTTYDSLDEVEKIRNCHPTCELLL 174

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
            ++          +             +           V G+ FH          +   
Sbjct: 175 RIKPPQDSGARTSLGLKY-GALPEEVHELLQAAHEAGLKVTGVSFHIGSGGADTRAYDGA 233

Query: 179 LKNIEKEFGH----FITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232
           +   +  F       + ++  + +GGG       +   +K        F  +  + +  E
Sbjct: 234 ISAAKNVFEMASGLGLPRMRVLDIGGGFTSGPPFEAAALKINAAIQASFGNEEGLVVIGE 293

Query: 233 PGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDYLLYQ-------------- 276
           PG        TL T ++   +  +++   I D            Y               
Sbjct: 294 PGRYFAETAFTLATRIIGKRVRGDVREYWIDDGIYGTLNNIVFDYATVTCMPLACTSKPE 353

Query: 277 -ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
               +   N   Y + V G +C + D     +    +++ D + F ++  Y  +    FN
Sbjct: 354 NPRCSRELNLKTYPSTVFGPTCDSIDTVLRDYKLPGLQVNDWLVFPNMGAYTTSSGTNFN 413

Query: 336 GI 337
           G 
Sbjct: 414 GF 415


>gi|214091212|gb|ACJ63455.1| ornithine decarboxylase [Haliotis diversicolor supertexta]
          Length = 472

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 64/382 (16%), Positives = 113/382 (29%), Gaps = 45/382 (11%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++        +     V+   A+KC   +G+   L         +S +E+  
Sbjct: 40  FFIADLGDIVAKYKKWRRLLPR--VEPFYAVKCNDDYGVLKLLGDLGTSFDCASKFEIDK 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       Y    K        +  +  +    ++    K KA     ++ LRI P
Sbjct: 98  VLNLGLPPSRIIYANPCKQTSFLRHAAKRNVDLMTFDNEAELLKVKAVFPDARLVLRILP 157

Query: 125 S-----VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
                                 +L EK K+   S    V G+ FH     +    F+  +
Sbjct: 158 PSNFKVQCELGMKFGCHPSKAKQLLEKAKELELS----VVGVSFHVGSGAEEAAAFAVAV 213

Query: 180 KNIEKEFG---HFITQIEWISLGGGIH-FTDKDYPVKDFCQRLKEFSEKYSV-----QIY 230
           +     F            + +GGG           ++    L    + Y       +I 
Sbjct: 214 EQAYGVFQTGLDMGFPFTLLDIGGGFPGQVTAAISFEEVVAVLNPVLDHYFPASSGVRII 273

Query: 231 LEPGEAIVTNTTTLNTTVLDISE------------------------NIKNLVIVDSSVE 266
            EPG   V +  TL   ++                                   V  S  
Sbjct: 274 AEPGRYFVASAFTLTANIIAKRMVARDKSNDEHLPDQVVTGDDEPASMYYINDGVYGSFN 333

Query: 267 AHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
             + D+     S     +   + + V G +C   D   E +    ++IG+ I FED+  Y
Sbjct: 334 CLLFDHATVTPSVLQDGSDMTFVSSVWGPTCDGLDCITEEYRLPEMQIGEWIYFEDMGAY 393

Query: 327 NINRKNWFNGINMPTIAVKNVD 348
            I   + FNG+  P I     D
Sbjct: 394 TICASSTFNGMPRPRIFYLCHD 415


>gi|306819518|ref|ZP_07453225.1| diaminopimelate decarboxylase [Mobiluncus mulieris ATCC 35239]
 gi|304647810|gb|EFM45128.1| diaminopimelate decarboxylase [Mobiluncus mulieris ATCC 35239]
          Length = 538

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 56/417 (13%), Positives = 114/417 (27%), Gaps = 75/417 (17%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNA----GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           TP +++D                        ++  A K F   G+         G  ++S
Sbjct: 66  TPVFIMDMDDFRKRARAWREAFTKTFGKGNAQVYYAGKAFLCLGLARVATAQGLGLDTAS 125

Query: 60  LYEVMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
             E+ L             +   K       AV +    II ++++++ + +     L +
Sbjct: 126 SGELTLALASGIDPLRVGLHGNGKSAALLHQAVSAGIGRIIIDSLAEIPRLQRVLDALPQ 185

Query: 117 ----KIGLRINPSVSYSKFILADPNRPFSRLGEKCK------------------------ 148
                + +R+   V               + G   +                        
Sbjct: 186 AAMVPVMIRLTTGVHAGGHEYIATAHEDQKFGLSLEPGTHAGLCPDDSDWDGCYVVSPAD 245

Query: 149 --------DKIESEIKNVNGLMFHNNCENKSFLCF----SAMLKNIEKEFGHFITQIEWI 196
                     +  +   + GL  H   +  +F  F      +++            +  I
Sbjct: 246 SPALAAVKLILADDRLELVGLHSHIGSQISAFAGFTAAAQKIIEFRGAVARETGYLVPEI 305

Query: 197 SLGGGIHFTDKDYPVKDFC---------QRLKEFSEKYSVQ---IYLEPGEAIVTNTTTL 244
            LGGG                       + +++  E++      + +EPG ++V  TT  
Sbjct: 306 DLGGGYGVAYTAATPPGMAPHEIAEKLYRAVQDACEQHDQPLPAVSVEPGRSLVAPTTIT 365

Query: 245 NTTVLDISEN-----------IKNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYT 289
              VL+I +             +  V VD  +  ++   L         A          
Sbjct: 366 LYRVLNIKDQPVGTRLDGSVVYRRYVAVDGGMSDNIRPALYDAHYTATLANRLSAAPLVA 425

Query: 290 AMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
             V G  C +GDI          +  GD ++      Y  +  + +N    P +   
Sbjct: 426 TRVVGTHCESGDIVVRNVALPADLTEGDLLAVPMTGAYGWSMSSNYNWFTRPGVLGV 482


>gi|269976851|ref|ZP_06183825.1| diaminopimelate decarboxylase [Mobiluncus mulieris 28-1]
 gi|269934682|gb|EEZ91242.1| diaminopimelate decarboxylase [Mobiluncus mulieris 28-1]
          Length = 538

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 56/417 (13%), Positives = 114/417 (27%), Gaps = 75/417 (17%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNA----GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           TP +++D                        ++  A K F   G+         G  ++S
Sbjct: 66  TPVFIMDMDDFRKRARAWREAFTKTFGKGNAQVYYAGKAFLCLGLARVATAQGLGLDTAS 125

Query: 60  LYEVMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
             E+ L             +   K       AV +    II ++++++ + +     L +
Sbjct: 126 SGELTLALASGIDPLRVGLHGNGKSAALLHQAVSAGIGRIIIDSLAEIPRLQRVLDALPQ 185

Query: 117 ----KIGLRINPSVSYSKFILADPNRPFSRLGEKCK------------------------ 148
                + +R+   V               + G   +                        
Sbjct: 186 AATVPVMIRLTTGVHAGGHEYIATAHEDQKFGLSLEPGTHAGLCPDDSDWDGCYVVSPAD 245

Query: 149 --------DKIESEIKNVNGLMFHNNCENKSFLCF----SAMLKNIEKEFGHFITQIEWI 196
                     +  +   + GL  H   +  +F  F      +++            +  I
Sbjct: 246 SPALAAVKLILADDRLELVGLHSHIGSQISAFAGFTAAAQKIIEFRGAVARETGYLVPEI 305

Query: 197 SLGGGIHFTDKDYPVKDFC---------QRLKEFSEKYSVQ---IYLEPGEAIVTNTTTL 244
            LGGG                       + +++  E++      + +EPG ++V  TT  
Sbjct: 306 DLGGGYGVAYTAATPPGMAPHEIAEKLYRAVQDACEQHDQPLPAVSVEPGRSLVAPTTIT 365

Query: 245 NTTVLDISEN-----------IKNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYT 289
              VL+I +             +  V VD  +  ++   L         A          
Sbjct: 366 LYRVLNIKDQPVGTRLDGSVVYRRYVAVDGGMSDNIRPALYDAHYTATLANRLSAAPLVA 425

Query: 290 AMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
             V G  C +GDI          +  GD ++      Y  +  + +N    P +   
Sbjct: 426 TRVVGTHCESGDIVVRNVALPADLTEGDLLAVPMTGAYGWSMSSNYNWFTRPGVLGV 482


>gi|227876243|ref|ZP_03994359.1| diaminopimelate decarboxylase [Mobiluncus mulieris ATCC 35243]
 gi|227843204|gb|EEJ53397.1| diaminopimelate decarboxylase [Mobiluncus mulieris ATCC 35243]
          Length = 538

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 56/417 (13%), Positives = 114/417 (27%), Gaps = 75/417 (17%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNA----GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           TP +++D                        ++  A K F   G+         G  ++S
Sbjct: 66  TPVFIMDMDDFRKRARAWREAFTKTFGKGNAQVYYAGKAFLCLGLARVATAQGLGLDTAS 125

Query: 60  LYEVMLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
             E+ L             +   K       AV +    II ++++++ + +     L +
Sbjct: 126 SGELTLALASGIDPLRVGLHGNGKSAALLHQAVSAGIGRIIIDSLAEIPRLQRVLDALPQ 185

Query: 117 ----KIGLRINPSVSYSKFILADPNRPFSRLGEKCK------------------------ 148
                + +R+   V               + G   +                        
Sbjct: 186 AATVPVMIRLTTGVHAGGHEYIATAHEDQKFGLSLEPGTHAGLCPDDSDWDGRYAVSPAD 245

Query: 149 --------DKIESEIKNVNGLMFHNNCENKSFLCF----SAMLKNIEKEFGHFITQIEWI 196
                     +  +   + GL  H   +  +F  F      +++            +  I
Sbjct: 246 SPALAAVKLILADDRLELVGLHSHIGSQISAFAGFTAAAQKIIEFRGAVARETGYLVPEI 305

Query: 197 SLGGGIHFTDKDYPVKDFC---------QRLKEFSEKYSVQ---IYLEPGEAIVTNTTTL 244
            LGGG                       + +++  E++      + +EPG ++V  TT  
Sbjct: 306 DLGGGYGVAYTAATPPGMAPHEIAEKLYRAVQDACEQHDQPLPAVSVEPGRSLVAPTTIT 365

Query: 245 NTTVLDISEN-----------IKNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYT 289
              VL+I +             +  V VD  +  ++   L         A          
Sbjct: 366 LYRVLNIKDQPVGTRLDGSVVYRRYVAVDGGMSDNIRPALYDAHYTATLANRLSAAPLVA 425

Query: 290 AMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
             V G  C +GDI          +  GD ++      Y  +  + +N    P +   
Sbjct: 426 TRVVGTHCESGDIVVRNVALPADLTEGDLLAVPMTGAYGWSMSSNYNWFTRPGVLGV 482


>gi|223993801|ref|XP_002286584.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220977899|gb|EED96225.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 484

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 73/416 (17%), Positives = 127/416 (30%), Gaps = 55/416 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y     +L       L      G+ +  A+K      +            +SS YE
Sbjct: 62  GTPLYAYSLSQLAAAATATLAFPNAFGLTVRYAMKACPNGSILKYFLSRGICIDASSGYE 121

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           V          E  + +      + D ++     I   +VSQL +         +K+G+R
Sbjct: 122 VRRAMSMGVPAEKISLSSQELPADFDELIGLGVKINACSVSQLERIGKAFPNTSQKVGIR 181

Query: 122 INP-------SVSYSKFILADPNRPFSRLGEKCK--------DKIESEIKNVNGLMFHNN 166
           INP       S S + F   +   P S  G   +        D +      V  +  H  
Sbjct: 182 INPGVGSGGFSSSTTGFSKTNVGGPSSSFGIWHELVTDGTVPDIVTKYGLEVERIHTHIG 241

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD--------YPVKDFCQRL 218
             +   +  S  +      F      I  ++LGGG                         
Sbjct: 242 SGSDPAIWQS--VATRSLSFCKLWDTITTLNLGGGYKVGRNPGEKTTDLNEIGAPVADAF 299

Query: 219 KEFSEKYSV--QIYLEPGEAIVTNTTTLNTTVLDI-------SENIKNLVIVDSSVEAHV 269
           ++F+++     Q+ +EPG  +V N   L TT+ D        S+     + +D+ +   +
Sbjct: 300 RDFAKETGRELQMEIEPGTYLVANAGALVTTIQDKVSTKSASSDEGHIYLKMDAGMTDVL 359

Query: 270 PDYLLYQESATIYPNT---------GPYTAMVCGRSCLAGDIFG---------EFHFEKP 311
              L                        + +V G  C +GD+           E    + 
Sbjct: 360 RPSLYGAIHPITILPASGKSSDIGTATESVVVVGHCCESGDLMTPKPGEPEALEERVLRT 419

Query: 312 VKIGDRISFEDVAGYNINRKN-WFNGINMPTIAVKNVDGTIKAIR-EFSYNDYYNN 365
            +IGD    +    Y        +N        + +++G +  IR   S    Y N
Sbjct: 420 AEIGDIAVMDGSGAYCAGMSTKNYNSFPEAPEVLVDLEGKVHLIRKRQSLQQIYEN 475


>gi|196233372|ref|ZP_03132216.1| Orn/DAP/Arg decarboxylase 2 [Chthoniobacter flavus Ellin428]
 gi|196222512|gb|EDY17038.1| Orn/DAP/Arg decarboxylase 2 [Chthoniobacter flavus Ellin428]
          Length = 485

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 55/417 (13%), Positives = 116/417 (27%), Gaps = 54/417 (12%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P ++  ++ L      A          V+   + K      +    +Q        S 
Sbjct: 46  GSPLFVFSEKALREKYREAHRAFSRRYPDVQFAWSYKTNYLNAICRVFHQEGSIAEVVSG 105

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKI 118
           +E          G    +N  +K+        N    I  + + +L       +   + +
Sbjct: 106 FEYEKARRNGVDGSKIIFNGPHKERADLERAVNERAMIQVDNIDELLTLASIVRDRTEPV 165

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKC---KDKIESEIKNVNGLMFHNNCENKSFLCF 175
            + +   +      +          GE     +         + GL  H          +
Sbjct: 166 SIALRVHLQTGTHTVWSKFGFNGDDGEVLQIIRRITTLHNLRLQGLHCHVGTFILDPENY 225

Query: 176 SAMLKNI---EKEFGHFIT-QIEWISLGGGIHFTDKDYPVK-----------DFCQRLK- 219
               + +     E       QI +++LGGG     + +               + + +  
Sbjct: 226 RVAARRLVELAIEAEKIGAGQIRYLNLGGGFASHARLHYQYLPPEQTTPSLDRYAEAICE 285

Query: 220 -----EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD------------ 262
                  + +   ++YLE G A+V +   L ++V+ + +      +              
Sbjct: 286 TIIGLWPAGRDLPRLYLETGRALVDDAGYLISSVVAVKKRHLPSQMQTAMAAYGKSAAVM 345

Query: 263 -----------SSVEAHVPDYLLYQES--ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFE 309
                       +    +     YQ            P    V G  C+  D+  E    
Sbjct: 346 PQGNSRHALVLDAGINLLYTTAWYQPKILPARPCLDTPEPTTVFGCLCMNIDVIREDAPL 405

Query: 310 KPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366
             +  GD++    V  YNI +   F     P + + + +  +  IR     DY   L
Sbjct: 406 PSLTTGDQVVLHPVGAYNITQSMQFITY-RPAVVMIDSERKVHVIRRRENLDYVQEL 461


>gi|195430116|ref|XP_002063103.1| GK21743 [Drosophila willistoni]
 gi|194159188|gb|EDW74089.1| GK21743 [Drosophila willistoni]
          Length = 397

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 49/359 (13%), Positives = 104/359 (28%), Gaps = 26/359 (7%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
             + D   +         +     V    A+KC     +   L +   G   +S  E+ L
Sbjct: 35  LNICDLSSVERKFHLWQRLLPR--VHPFYAVKCNDDPMIVQVLAKLGAGFDCASKNELKL 92

Query: 66  GH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   +    +     A             ++   +K         + +R   
Sbjct: 93  VLGSAVTPERIIFANPCRPVSHLAYAEKHGVTNGTVDNEFEIYKLYKHYPSSNLIVRYKS 152

Query: 125 SVSYSKFILADPNRPFSR-LGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
               ++  L D     +           ++   NV G   H          ++  ++  +
Sbjct: 153 EAKEAQCPLGDKFGCDADGDATALMLLAKALELNVTGTSVHVGSGCSELGAYNRAIRKAK 212

Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ----IYLEPGEA 236
             F         +  + +GGG   +D     +   + + +  ++Y       I  EPG  
Sbjct: 213 HLFQFGELLDFDMNLLDIGGGFPGSDD-EKFEKIAEDVNKSLDRYFPDENVEIIAEPGRF 271

Query: 237 IVTNTTTLNTTVLDISE------------NIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
            V +  TL   +    E                   +  S    + D+ +      +   
Sbjct: 272 FVASALTLICKIHAKREVRNPSTGKLDTVMYYLNDGIYGSFNCILYDHQVIIAEHYLNST 331

Query: 285 T--GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                + +++ G +C A D+  +      +  GD I F ++  Y +   + FNG  +P 
Sbjct: 332 EDLPQFKSLLFGPTCDALDMITDNLQLPNLNRGDLIGFPNMGAYTVPVASPFNGFEVPK 390


>gi|326433060|gb|EGD78630.1| hypothetical protein PTSG_01608 [Salpingoeca sp. ATCC 50818]
          Length = 444

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 50/375 (13%), Positives = 106/375 (28%), Gaps = 40/375 (10%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  +     LL           N   +L  A K      +   ++    G    SL EV 
Sbjct: 63  PVNVYHVPTLLQRARELKAALTNVN-RLFFATKSNTHPRLVRAIHSLGFGLECVSLQEVE 121

Query: 65  --LGHEKFGGETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
             +       +   +   +   +   A +     +  + V  L  + D        + + 
Sbjct: 122 YVMAATHASPDHVLFTPNFATRDEYAAAIKLGVHVTVDNVYCLRAWPDVFTGASVALRID 181

Query: 122 INPSVSYSKFILADPNRPFSRLGE----KCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
                 + K ++   ++    +G     +     +     V GL  H+         ++ 
Sbjct: 182 PVKGRGHHKHVVTAGSQSKFGMGIEDMPEVVQICKDNNITVVGLHCHSGSGIFDPATWNE 241

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ---IYLEPG 234
                          ++++ +GGG+    +    +    ++ E           +++EPG
Sbjct: 242 H-AACLIAVAKQFPAVKFMDIGGGLGVPYRFTEKRLNLDKVNEELAAILHPGIDLWMEPG 300

Query: 235 EAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQES--------------- 278
             +V+    L   V  I        V + + +   +   L                    
Sbjct: 301 RFLVSECGVLLARVSQIKTKAGVKFVGITAGMNNLLRPALYGSHHELANLSHLARTRRGA 360

Query: 279 -----------ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGY 326
                      AT   +       VCG  C + DIFG         + GD I  +    Y
Sbjct: 361 TDGATDGATDGATDGDSGACEPVTVCGPICESADIFGRDRMLPVDTREGDVILVDTTGAY 420

Query: 327 NINRKNWFNGINMPT 341
            +  ++++N     +
Sbjct: 421 GVTMESYYNMRPRAS 435


>gi|295812475|gb|ADG34834.1| ornithine decarboxylase [Sporothrix schenckii]
          Length = 410

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 55/376 (14%), Positives = 102/376 (27%), Gaps = 48/376 (12%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++        +      VK   A+KC     +   L +  +G   +S  E+  
Sbjct: 24  FFVADLGEVYR--QQLRWKMNLPRVKPFYAVKCNPDPKVLRLLAELGNGFDCASKAEIEQ 81

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
             +         Y    K       +       + F+   +L K           + +  
Sbjct: 82  VLDMGVDPSRIIYAQPCKTNSYVRYVASKGVRAMTFDNADELRKIAKLYPDAELFLRILT 141

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           + S S  +  L       +  G            NV G+ FH          F   +++ 
Sbjct: 142 DDSSSLCRLSLKFGASLDTTDGLLA--LARELNLNVVGVSFHVGSGASDPQAFLKAVQDA 199

Query: 183 EKEFGH---FITQIEWISLGGGIHFTDKDYPVKD--FCQRLKEFSEKYSVQIYLEPGEAI 237
              F         +  + +GGG    D    +         + F     V +  EPG   
Sbjct: 200 YAVFSQAATHGYSLRTLDVGGGFCSDDSFEGMATVLRDALDEYFPPHLGVSLIAEPGRYF 259

Query: 238 VTNTTTLNTTVLD----------------------ISENIKNLVIVDSSVEAHVPDY--- 272
           V++  T+   ++                       +  N        S +  H       
Sbjct: 260 VSSVFTIACNIIARRTLEDPEQAVDGNARRDPSYMVYVNDGLYGNFSSIMFDHQNPVAKV 319

Query: 273 ----------LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFE 321
                          + T           + G +C   D   E   F + + +GD + FE
Sbjct: 320 LTSSARFLYDTEGAHATTADAGAAGTEYSIWGPTCDGIDRITESIRFRQTLDVGDWLYFE 379

Query: 322 DVAGYNINRKNWFNGI 337
           D+  Y       FNG 
Sbjct: 380 DMGAYTSCSATRFNGF 395


>gi|55853671|gb|AAV67809.1| siderophore synthesis decarboxylase [Ralstonia solanacearum]
          Length = 413

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 58/377 (15%), Positives = 102/377 (27%), Gaps = 42/377 (11%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            YL D   L              G +L  A+K  +   +   L+  + G   +SL EV+ 
Sbjct: 19  AYLYDLDHLRERAGRL-SAMLPPGCELFYAIKANSDAPVLAALDGAVAGYEVASLGEVVR 77

Query: 66  GHEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
             E        +    K       A+    + I   +  QL +    A+++ ++  + + 
Sbjct: 78  AREVGAHARIVFGGPGKTDAELQGALERGVELIHVESELQLRRLDAVARRMGRRARVLLR 137

Query: 124 PSVS---------------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE 168
            + +                              + +  +         V GL  H    
Sbjct: 138 VNPNPLSADSAGKRPQGTLTMGGQPTQFGIEEDAVPDLIRLARGLAGVEVVGLHLHALSN 197

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKE 220
           N             L    +        ++ +++GGGI          +  + FC  L  
Sbjct: 198 NLDADSHLALMRHYLALALRLRREHGLTLDTLNVGGGIGVDYVQPSHAFDWRRFCDGLGA 257

Query: 221 FSEK--YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQE 277
              +     +I  E G  I  +     T V+DI  N      V      H          
Sbjct: 258 LLAEAGAGCRIVFECGRFIAADCGYYVTEVVDIKRNHGKWFAVLRGGTHHFRLTASWQHN 317

Query: 278 SATIYPNTGPYTAM------------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
                     +T              +CG  C   D+         + +GDRI F+    
Sbjct: 318 HPFAIVPNAQWTYPFARPSVQAQAVTLCGELCTPKDVLARDVVVDRLSVGDRIVFQLAGA 377

Query: 326 YN-INRKNWFNGINMPT 341
           Y      + F     P 
Sbjct: 378 YGWHISHHDFLSHPHPE 394


>gi|78223226|ref|YP_384973.1| Orn/DAP/Arg decarboxylase 2 [Geobacter metallireducens GS-15]
 gi|78194481|gb|ABB32248.1| Orn/DAP/Arg decarboxylase 2 [Geobacter metallireducens GS-15]
          Length = 419

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 52/385 (13%), Positives = 117/385 (30%), Gaps = 37/385 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP+YL D  K+            ++ ++LL A+K      +   +   +DG   +S  E
Sbjct: 25  GTPFYLYDLDKVKEKCAAVRKAFGDS-LELLYAVKANPNRELLAAMRGEVDGLDIASAGE 83

Query: 63  VMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +    E  +     ++      +D    ++ +    I   ++ +LN  +D  +    +  
Sbjct: 84  LERALETGYDAGCISFAGPGKTRDELRRSLEAGVGCISVESLRELNDLRDLVRAGSHRAY 143

Query: 120 LRINPSVS-YSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENK 170
           + +  +     +          S+ G   ++   +           +  G+  +   +  
Sbjct: 144 ILVRVNPQLLIRDFAVKMGGKASQFGIDEEELPSALDFIKANADAFDFKGIHIYAGTQCL 203

Query: 171 SFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFS 222
           +    +  L N           +  +   I++GGG+  +  +      +       +   
Sbjct: 204 NEEALAQNLANTLAIAARITTDYGMECRVINIGGGLGVSYYEEHPGLDLDKLALLFRAEF 263

Query: 223 EKYS------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-------- 268
           ++Y        +I LE G  +V       T V+    +      V      H        
Sbjct: 264 DRYREATGTKPRILLELGRFLVAEAGIYVTRVVSEKLSRGEQFYVLDGGMNHHLSASGNL 323

Query: 269 -VPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
            +     Y       P        + G  C   D+ G+    +  ++GD + F +   Y 
Sbjct: 324 GMTIRKNYLVRNLSRPGAERIICTLVGPLCTPLDLMGKGVTVEVPEVGDLVGFLNSGSYG 383

Query: 328 INRKN-WFNGINMPTIAVKNVDGTI 351
            +     F G   P   +       
Sbjct: 384 YSASPLLFLGHGEPCELLVEGKDVR 408


>gi|332524864|ref|ZP_08401053.1| diaminopimelate decarboxylase [Rubrivivax benzoatilyticus JA2]
 gi|332108162|gb|EGJ09386.1| diaminopimelate decarboxylase [Rubrivivax benzoatilyticus JA2]
          Length = 415

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 51/375 (13%), Positives = 100/375 (26%), Gaps = 34/375 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+Y +D+  L   +         AGVKL  A+K      +   +   +DG   +S  E+
Sbjct: 42  TPFYAVDRGLLRRRVAELRAALP-AGVKLHYAMKANPMPALVAFMAGLVDGIDVASGGEL 100

Query: 64  MLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            +  +      E        +D E+   ++    +   +  +L      A +      + 
Sbjct: 101 KVALDAGADAAEVSFAGPGKRDAELRQAVAARVLVNVESERELAVLAAAAAEFGVPARVA 160

Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF-- 172
           +  +     K           + G            I        G       +N     
Sbjct: 161 VRVNPDFELKGSGMRMGGGAKQFGVDADRVPALLARIGELGLAFEGFHLFAGSQNLRAEA 220

Query: 173 --LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ-- 228
                    +   +   H    + +++LGGG          +     +    +  + +  
Sbjct: 221 ICEAQRQSYELALRLAAHAPAPLRFLNLGGGFGIPYFPGETRLDLAPIGANLQALAERAR 280

Query: 229 -------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY--------- 272
                  + +E G   V       T V+D   +   + +V      H             
Sbjct: 281 TELPEASLVIELGRYFVGEAGVYVTRVVDRKLSRGQVFLVCDGGLNHHLAASGNFGQVVR 340

Query: 273 -LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                       +    TA   G  C   D+  +     P  +GD +       Y  +  
Sbjct: 341 KNYPVTVGNRLGDEARETATAVGPLCTPLDLLADRMSLPPADVGDLVVVFQSGAYGASAS 400

Query: 332 NW-FNGINMPTIAVK 345
              F G    T  + 
Sbjct: 401 PQAFLGHAPVTEVLV 415


>gi|34495197|emb|CAE02644.1| ornithine decarboxylase [Lotus japonicus]
          Length = 422

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 58/350 (16%), Positives = 116/350 (33%), Gaps = 25/350 (7%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67
           ++D   ++  +D   ++ K   V+   A+KC     +   L         +S  E+ +  
Sbjct: 63  VLDLGVVMELMD--KWVTKFPTVQPFYAVKCNPDISLIGALAALGSSFDCASKAEIQIVL 120

Query: 68  E-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                 +   Y    K       A     +   +++V +++K +        ++ LRI  
Sbjct: 121 SLGISPDRIVYANPCKSESDIKYAATVGVNLATYDSVYEVDKVQK--WHPKCELLLRIKY 178

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
               +   L            +     E+   NV G+ FH        L  S  ++  + 
Sbjct: 179 DSEGALASLGVKYGALPEEVPELLKAAEAAGVNVTGVSFHIGSGGADPLALSGAIEAAKS 238

Query: 185 EFGHFIT----QIEWISLGGGIHFTDKDY--PVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
            F         ++  + +GGG     +      K     L  F +   + +  EPG    
Sbjct: 239 VFEMASHFGMSRMSILDIGGGFTCGPELDVAATKVKAAILAHFGDHQGLVVIAEPGRYFT 298

Query: 239 TNTTTLNTTVLD-----------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287
               TL + V+            I++ +   +       A +    L Q++ T       
Sbjct: 299 ETAFTLVSRVIGKRVRGELREYWINDGVYGSISNIIYDHATIRCAPLRQKNLTCVD-AKT 357

Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
           Y   V G +C   DI  + +    +++ D + F ++  Y I+    FNG 
Sbjct: 358 YPTTVFGPTCDCIDIVLKDYQLPELQVNDWLVFPNMGAYTISSGTNFNGF 407


>gi|171692171|ref|XP_001911010.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946034|emb|CAP72835.1| unnamed protein product [Podospora anserina S mat+]
          Length = 510

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 50/373 (13%), Positives = 103/373 (27%), Gaps = 45/373 (12%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++        +      VK   A+KC     +   L    +G   +S  E+  
Sbjct: 121 FFVADLGEVYR--QHLRWKMNLPRVKPFYAVKCNPDPMLLKLLAALGNGFDCASKAEIEQ 178

Query: 66  G-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                       Y    K               + F+   +L K      +    + +  
Sbjct: 179 VLRMGVDPSRIIYAQPCKTNSYVRYVAQQGVRAMTFDNADELRKIARFYPEAELYLRILT 238

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           + + S  +  +       S  G            NV G+ FH          F   +++ 
Sbjct: 239 DDTSSLCRLSMKFGASLDSTDGLLA--LARDLNLNVVGVSFHVGSGASDPSAFLKAVRDS 296

Query: 183 EKEF---GHFITQIEWISLGGGIHFTDKDYPVKD--FCQRLKEFSEKYSVQIYLEPGEAI 237
              F     +   ++ + +GGG    +    +         + F     + +  EPG   
Sbjct: 297 HMVFQQAASYGFSLKTLDVGGGFCADNTFEQMAGVLREALDEYFPAHSGINLIAEPGRFY 356

Query: 238 VTNTTTLNTTVLD--------------ISENIKNLVIVDSSVEAHVPDYLLYQESA---- 279
            +   TL   V+                + +   ++ V+  +  +    +   +      
Sbjct: 357 ASAAYTLACNVIARRTIQDTALINNGTTTPDPSYMLYVNDGLYGNFSSIMFDHQHPEAKV 416

Query: 280 --------------TIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFEDVA 324
                             +       + G +C   D   E   F   + +GD + FED+ 
Sbjct: 417 LRAGGQTLYDTPAANGMDDRSGVEYSIWGPTCDGIDRITESIRFPVVLDVGDWLYFEDMG 476

Query: 325 GYNINRKNWFNGI 337
            Y       FNG 
Sbjct: 477 AYTKCSATTFNGF 489


>gi|126697432|gb|ABO26673.1| ornithine decarboxylase 1 [Haliotis discus discus]
          Length = 472

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 63/380 (16%), Positives = 114/380 (30%), Gaps = 41/380 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++        +     V+   A+KC   +G+   L         +S  E+  
Sbjct: 40  FFIADLGDIVAKYKKWRRLLPR--VEPFYAVKCNDDYGVLKVLADLGTSFDCASKMEIDK 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       Y    K        +  +  +    ++    K KA     ++ LRI P
Sbjct: 98  VLNLGISPSRIIYANPCKQTSYVRHAAKRNVDLMTFDNEAELLKVKAVFPDARLVLRILP 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIE---SEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
             ++   +  +    F     K K  +E       NV G+ FH     +    F+  ++ 
Sbjct: 158 PSNFK--VRCELGMKFGCHPAKAKQLLETAKELELNVVGVSFHVGSGAEEAAAFAVAVEQ 215

Query: 182 IEKEFG---HFITQIEWISLGGGIH-FTDKDYPVKDFCQRLKEFSEKYSV-----QIYLE 232
               F            + +GGG           ++    L    + Y       QI  E
Sbjct: 216 AHGVFQTGLDMGFPFTLLDIGGGFPGQVTAAISFEEVVDVLSPALDHYFPASSGVQIIAE 275

Query: 233 PGEAIVTNTTTLNTTVLDIS------------------------ENIKNLVIVDSSVEAH 268
           PG   V +  TL   ++                                   V  S    
Sbjct: 276 PGRYFVASAFTLTANIIAKRVVARDKSNHEHLPDQVVTGDDEPAYMYYINDGVYGSFNCL 335

Query: 269 VPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
           + D+     S     +   + + V G +C   D   E      ++IG+ I FED+  Y +
Sbjct: 336 LFDHATVTPSVLQDGSDMTFVSSVWGPTCDGLDCIMEDCRLPEMQIGEWIYFEDMGAYTM 395

Query: 329 NRKNWFNGINMPTIAVKNVD 348
              + FNG+  P +     D
Sbjct: 396 CCASTFNGMPRPRVFYLCHD 415


>gi|170736652|ref|YP_001777912.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Burkholderia cenocepacia MC0-3]
 gi|254249328|ref|ZP_04942648.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia cenocepacia PC184]
 gi|124875829|gb|EAY65819.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia cenocepacia PC184]
 gi|169818840|gb|ACA93422.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Burkholderia cenocepacia MC0-3]
          Length = 402

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 39/375 (10%), Positives = 94/375 (25%), Gaps = 34/375 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+++  +  +   +         + ++L  ++K      +   L   +DG   +S  E+
Sbjct: 29  TPFFVYARAAIDARVCQLRAKLPAS-IQLHYSIKANPMPAVVHHLAMRIDGFDVASGAEL 87

Query: 64  MLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            L        +   +        E+   +++   +   +++QL+       +   +  + 
Sbjct: 88  ALALNAGMPPDQIGFAGPGKTREELRCAVASGVNVHIESLTQLHLLAALGWEQGLRPRVT 147

Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174
           I  +                ++ G   +        + +    + G       +      
Sbjct: 148 IRVNPDFQITHAGMRMGGGATQFGIDAEQVPALLQELSTCDVTLAGFHVFWGSQCLRPAT 207

Query: 175 FSAMLKNIEKEFGHFITQI----EWISLGGGIHFTD---------KDYPVKDFCQRLKEF 221
                +   +      + +     +++LGGG                          +  
Sbjct: 208 VVEAQRRSAELVMKLASDLPLPPRYVNLGGGFGIPYFEGEVPLDLDAVAQPMHAWLSRMH 267

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
                V+  LE G  +V         V+D   +     +V      H             
Sbjct: 268 RALPGVRPVLEFGRYLVGEAGAYVCRVIDRKVSRGTTFLVTDGGLHHHLAASGNFGQVLR 327

Query: 282 YPNT----------GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                               + G SC   D   +        IGD +       Y  +  
Sbjct: 328 RNFPVVLGNRLGDTPTERCHIVGCSCTPLDRIVDDVLLPEAHIGDFVVVLQSGAYARSAS 387

Query: 332 NW-FNGINMPTIAVK 345
              F G       + 
Sbjct: 388 PRDFLGHPEAIEMLV 402


>gi|258654007|ref|YP_003203163.1| Orn/DAP/Arg decarboxylase 2 [Nakamurella multipartita DSM 44233]
 gi|258557232|gb|ACV80174.1| Orn/DAP/Arg decarboxylase 2 [Nakamurella multipartita DSM 44233]
          Length = 508

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 40/396 (10%), Positives = 88/396 (22%), Gaps = 35/396 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D + L  +            V++  +LK      +   L          S  E
Sbjct: 20  GTPLFVYDAEVLAASFGELREALP-PAVEIFYSLKANPNVSVVGVLAAAGARAEVCSRAE 78

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIG 119
           +              +    K               I+  +  +L +    A+    +  
Sbjct: 79  LRTALLAGIDPADIIFLGPSKSATDLEACLTAGIYAIVAESFDELGELDRIARSRQVRPR 138

Query: 120 LRINPSVSYSKF-ILADPNRPFSRLGEKCKDKIES-------EIKNVNGLMFHNNCE--- 168
           + +  +                 + G                   +V G+  +       
Sbjct: 139 VMLRVNPRRGTTGAGLSMGGKPRQFGIDESQLEHCGSVPERFPQLDVCGIHVYLGTRLLD 198

Query: 169 -NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
            +       A L+  E+       ++  + +GGG+               ++   E    
Sbjct: 199 ASLFTENVRATLELAERIAAVTGIRLAAVDVGGGVGVAYFAGESDPDLSGVRAELEPLVA 258

Query: 228 QI---------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH------VPDY 272
                        E G  +          V  + +++            H      +   
Sbjct: 259 SFRQRHPRVRLMCESGRFLAARAGEYVVRVGAVKQSMGQWFASTDGGTHHHQAAAGIGSV 318

Query: 273 LLYQESATIYPNTGPYT---AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
           +       +   T         V G  C   D          +++GD I       Y  +
Sbjct: 319 VPRNFPVRLLNRTSAAPAGAWQVTGSLCTPNDTLARNVELPQLQVGDLIGIGRSGAYAAS 378

Query: 330 RKN-WFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
                F         + +        R  +  D   
Sbjct: 379 ASPGRFLSHGYAAEVLLHDGDGHLVRRRDNPLDLLR 414


>gi|226493711|ref|NP_001142154.1| hypothetical protein LOC100274319 [Zea mays]
 gi|194707370|gb|ACF87769.1| unknown [Zea mays]
          Length = 412

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 50/350 (14%), Positives = 103/350 (29%), Gaps = 19/350 (5%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           T +++     +L              V+   A+KC     +   L +   G   +S  E+
Sbjct: 53  TAFHVFRIDNVLELYSAWRRGL--PDVRPYYAVKCNPEPALLGALAELGAGFDCASRAEI 110

Query: 64  MLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                      +  Y    K        +    +   T     +     +   +   L  
Sbjct: 111 EAVLALGVPPSSIIYANPCKSEPHLEYAAAAG-VNLTTYDTEEEVAKVKRCHPRCELLLR 169

Query: 123 NPSVSYSKFILADPNRPFSRLGE--KCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
                 S+       +  +R  E       ++     V G+ FH          + A ++
Sbjct: 170 LKGPDGSETTCDLGTKYGARADEVVPLLRAVQRAGVTVAGVSFHVGSPVARVGVYRAAIE 229

Query: 181 NIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFC--QRLKEFSEKYSVQIYLEPG 234
                F       +  +  + +GGG                   + F +   V++  EPG
Sbjct: 230 AARAAFDEAAALGMPPMRVLDIGGGFTAGASFDDAAAVINDALARSFGDLPCVEVIGEPG 289

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGP-- 287
                   TL   V+      +            S+   + D+ + +      P  G   
Sbjct: 290 RYFCETAFTLAARVIGKRTRGEVREYWIDDGLYGSLNNILMDHKVPRPRPLATPRPGDRT 349

Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
           +T+ V G +C + D     +    + +GD + F+++  Y+    + FNG 
Sbjct: 350 HTSTVFGPTCDSQDEVVTGYQLPEMSVGDWLVFDNMGAYSTGSGSKFNGF 399


>gi|20091552|ref|NP_617627.1| ornithine decarboxylase [Methanosarcina acetivorans C2A]
 gi|19916709|gb|AAM06107.1| ornithine decarboxylase [Methanosarcina acetivorans C2A]
          Length = 390

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 55/367 (14%), Positives = 124/367 (33%), Gaps = 30/367 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+ +ID QK+  + +  +        K+  A+K      +   L         +++YE
Sbjct: 30  ETPFLVIDLQKIERSYEELVEHM--PFAKIHYAVKANPMDRVVLALKDKGSNFDVATIYE 87

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +          E  +Y    K  +  A          + ++ S L K   +A        
Sbjct: 88  LDQVLRLGVEPERISYGNTIKKEKDIAYAYEKGVRLFVTDSESDLKKLSREAPGSRVFFR 147

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177
           +      +         + P        K  +++E   +   GL FH   + +    +  
Sbjct: 148 ILTESDGADWPLSRKFGSHPDLIY----KLILKAEKLGLEPYGLSFHVGSQQRDIGQWDN 203

Query: 178 MLKNIEKEF---GHFITQIEWISLGGGIHFTDKDY--PVKDFCQRLKEFSE----KYSVQ 228
            +   +  F        Q++ I+LGGG     +     ++ + + ++ F      +   +
Sbjct: 204 AISKCKYLFEAAAEKGIQLKMINLGGGFPAKYQAQANDLETYAREIRRFLHDDFGEELPE 263

Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE-----AHVPDYLLYQESATIYP 283
           I +EPG ++V +   + + V+ IS+  +        ++       +       +      
Sbjct: 264 ILIEPGRSLVADAGIIVSEVVMISKKARFNQYKWVYLDIGKFGGLIETLDECIKYPIFCD 323

Query: 284 NTG-PYTAMVCGRSCLAGDIFG---EFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338
             G     ++ G +C + DI     ++ F   ++ G+R        Y  +  +  FNG  
Sbjct: 324 KKGCAEEVILAGPTCDSMDILYEHHKYSFPHTMREGNRAYIFTTGAYTQSYCSVNFNGFP 383

Query: 339 MPTIAVK 345
                + 
Sbjct: 384 PLKAYLI 390


>gi|24586474|ref|NP_477053.2| ornithine decarboxylase 2 [Drosophila melanogaster]
 gi|66774204|sp|P40808|DCOR2_DROME RecName: Full=Ornithine decarboxylase 2; Short=ODC; AltName:
           Full=dODC2
 gi|21627754|gb|AAF59149.2| ornithine decarboxylase 2 [Drosophila melanogaster]
          Length = 393

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 47/357 (13%), Positives = 96/357 (26%), Gaps = 24/357 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
             + D   L   L     +     ++   A+KC     +   L     G   +S  E+ L
Sbjct: 33  LNICDLSSLERKLRLWHKLMPR--IEPHYAVKCNDDPVVVKFLADLGTGFDCASKNELKL 90

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   +    +             +     ++   +K +       + +R   
Sbjct: 91  VLGLGVSPERIIFAHPCRPASHLRYAKEQQVVNGTVDNEYEIYKLRKHYPDSNLIVRFKS 150

Query: 125 S-VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
                   +                   ++    V G  FH          +   ++  E
Sbjct: 151 EAKKALCPLGDKYGCDAEADAAALMLLAKALGLKVTGTSFHVGSGCSEVEAYDRAIEKAE 210

Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEKYSVQIYLEPGEAI 237
             F        ++E + +GGG    D +   +        ++       ++I  EPG   
Sbjct: 211 NIFKVGEMIGHKMELLDVGGGFPGIDDEMFEEIAQSVNTSVELRFPDKRIRIISEPGRFF 270

Query: 238 VTNTTTLNTTV---LDISENIKNLVIVDSSVEAHVPDYLL-YQESATIYPNT-------- 285
           V    TL   V    ++      L  +   +   +                         
Sbjct: 271 VEAAYTLICKVHAKREVRSKDGKLDTMMYYLNDGIFGAFAGMFYYPEEVAPELYLDEAES 330

Query: 286 -GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                +++ G SC A D          +  GD + F ++  Y +   + FNG ++P 
Sbjct: 331 LPKLKSVIWGPSCDAMDKI-SDLLLPNLNPGDLLGFRNMGAYTMPIASPFNGFDVPE 386


>gi|194863622|ref|XP_001970531.1| GG23324 [Drosophila erecta]
 gi|190662398|gb|EDV59590.1| GG23324 [Drosophila erecta]
          Length = 399

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 50/357 (14%), Positives = 97/357 (27%), Gaps = 23/357 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
             + D   L   L     +     ++   A+KC     +   L     G   +S  E+ L
Sbjct: 33  LNICDLSNLERKLRLWHKLMPR--IEPHYAVKCNDDPVVVKVLADLGTGFDCASKNELKL 90

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   +    +             +     ++   +K +       + +R   
Sbjct: 91  VLGLGVSPERIIFAHPCRPASHLKYAKEQQVVNGTVDNEFEVYKLRKHHPDSNLIIRFKS 150

Query: 125 S-VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
                   +                   ++    V G  FH          +   ++  E
Sbjct: 151 EAKKALCPLGDKYGCDAETDAAALMLLAKALDLKVTGTSFHVGSGCSEVEAYDRAIEKAE 210

Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEKYSVQIYLEPGEAI 237
             F        ++E + +GGG    D +   +        +K       V+I  EPG   
Sbjct: 211 SIFKVGELIGHKMELLDVGGGFPGADDEMFEEIAHAVNTSVKLRFPDERVRIISEPGRFF 270

Query: 238 VTNTTTLNTTV---LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY------ 288
           V    TL   V    ++      L  +   +   +                  Y      
Sbjct: 271 VEAAYTLICKVHAKREVRSQDGKLDSMMYYLNDGIFGAFAGMFYYPEEMAPELYLDEAAS 330

Query: 289 ----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                +++ G SC A D          +  GD + F ++  Y +   + FNG ++P 
Sbjct: 331 LPKLKSVLWGPSCDALDKISGHLLLPSLNPGDLLGFRNMGAYTMPIASPFNGFDVPE 387


>gi|229119086|ref|ZP_04248424.1| Decarboxylase [Bacillus cereus Rock1-3]
 gi|228664370|gb|EEL19873.1| Decarboxylase [Bacillus cereus Rock1-3]
          Length = 411

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 58/395 (14%), Positives = 110/395 (27%), Gaps = 43/395 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+ +  +L  +    +    +  + +  +LK      +   L         SS+ E
Sbjct: 12  GSPLYVYNLAELTKSYQKLINSLPDKSI-IYYSLKANPNPEITRHLINLGCYAEISSIGE 70

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +    +     E   Y    K  +        N       + ++L    D  +   K I 
Sbjct: 71  LDTVLDVGGPPEHCLYTGPGKTKKEIQYALSKNVSHFSVESFNELEIINDLTKNHSKLIN 130

Query: 120 LRINPSVSYS-KFILADPNRPFSRLGEK--------CKDKIESEIKNVNGLMFHNNCENK 170
           + +  + S++            S+ G           K    ++   +NG   +N     
Sbjct: 131 ITLRINPSFNVGNASIKMTGIPSQFGFDEECLNSDIIKLFKGNKNLKINGFHIYNGSNFN 190

Query: 171 SFLCFSAML----KNIEKEFGHFITQIEWISLGGGIH---------FTDKDYPVKDFCQR 217
           +            + I          IE+I  GGG              K+         
Sbjct: 191 NIDILVENYTNILETILNLKNKLSIDIEFIDFGGGFAAPFGKDLDLPDYKELKDSLEALL 250

Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
            K F + +   I  E G  +      L  TV  + E+      +      H+      + 
Sbjct: 251 NKHFKDNHRPTIAFESGRYLTATCGCLIGTVQSVKESKGRKYCIVDFGINHLGGMSGLRR 310

Query: 278 SATIY-----------PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
             TI             N    T  + G  C   D   +      ++ GD +   +V  Y
Sbjct: 311 IPTIELNIFKLNISVEDNAKVETVTIVGPLCTPLDYLAKNVSVSKLQPGDVVFVPNVGAY 370

Query: 327 NINRK-NWFNGINMPTIAVKNV-----DGTIKAIR 355
            +      F    +P   +          T+K +R
Sbjct: 371 GLTASLIAFLSREIPKEIIIKNQSVICSHTLKIVR 405


>gi|289741541|gb|ADD19518.1| ornithine decarboxylase [Glossina morsitans morsitans]
          Length = 397

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 57/359 (15%), Positives = 108/359 (30%), Gaps = 26/359 (7%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            ++ D  K+     T         VK   A+KC     +  TL     G   +S  E+  
Sbjct: 33  LFICDLTKIKEKYVTWQKYMPR--VKPYYAIKCNNDDLVIKTLADLGTGFDCASKNEIKQ 90

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             +    GE   +    K         +   +     ++   +K         + +R   
Sbjct: 91  ILDIGVQGERIIFANPCKLTSHIKYARSNQVLNGTVDNEFEMYKLHKYYPQSNLIIRFRC 150

Query: 125 SVSYSKFILADPNRPF-SRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
                +  L +       +         +S   NV G+ FH     K F  +   +   +
Sbjct: 151 EAEEVQCPLGEKFGCDAEQDASALMLLAKSLQLNVIGISFHVGSGCKDFPAYDRAINIAK 210

Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV----QIYLEPGEA 236
           K F         +  + +GGG   +  D   K     + +   ++       +  EPG  
Sbjct: 211 KLFKFGALLGYDMNLLDIGGGFPGS-SDENFKVIAAIVNKSLNRHFPDRKVNVIAEPGRF 269

Query: 237 IVTNTTTLNTTVLD------------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
            V    TL   +              + +       V  S    + D+        +  +
Sbjct: 270 FVAAAYTLICKIHAKREVRSPNNNKLLRKMYYLNDGVYGSFNCILYDHQHVTVEHFLDTD 329

Query: 285 T--GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
           +    +  ++ G +C A D   E      +  GD ++F ++  Y I   + FNG   P 
Sbjct: 330 SYLPSFKTLIWGPTCDALDKIIEDTELPDLCCGDLLAFPNMGAYTIPIASPFNGFMSPK 388


>gi|325981618|ref|YP_004294020.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Nitrosomonas sp. AL212]
 gi|325531137|gb|ADZ25858.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Nitrosomonas sp. AL212]
          Length = 411

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 46/375 (12%), Positives = 103/375 (27%), Gaps = 34/375 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+Y  D++K+   ++          V L  A+K      +   L   +DG   +S  E+
Sbjct: 38  TPFYAYDRKKITERVELLRQNLPQE-VLLHYAIKANPMPAVVQHLASLVDGMDVASAGEM 96

Query: 64  MLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            +  +     E  ++     K  E+ + ++    +   +  ++     +   L     + 
Sbjct: 97  RVALDTTLTSEKISFAGPGKKVHELRSAIAAGVVLNIESPQEMELIAQQGVDLGMAPKVA 156

Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCK------DKIESEIKNVNGLMFHNNCENKSFLC 174
           I  +     K      +      G   +       +++    N  G    +  +N +   
Sbjct: 157 IRINPDFELKSSGVKMSGGSKPFGIDAECVPDVLKRLDLLDLNFVGFHIFSGSQNLNAAA 216

Query: 175 FSAMLKNIEK---EFGHFIT-QIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI- 229
                + I     +   +    ++ +++GGG                +    ++   +I 
Sbjct: 217 IQESHEKIVMLAIQLAKYAPSSVKLLNIGGGFGVPYFPGDQPLDIAAIGVNLQRLIKRIK 276

Query: 230 --------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY--------- 272
                    LE G  +V         VL+   +   + +V      H             
Sbjct: 277 QQLPETTVALELGRYLVAEAGIYVCRVLERKASRGQVFLVTDGGLHHHLAASGNLGQVIR 336

Query: 273 -LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                        T      V G  C   D+  +        + D +       Y +   
Sbjct: 337 KNYPVVIGNKVQGTAREIVSVVGPLCTPLDVLADQMAMARASVNDLVVVLQSGAYGLTAS 396

Query: 332 NW-FNGINMPTIAVK 345
              F     P   + 
Sbjct: 397 PTAFLDHPPPIEVLV 411


>gi|188581259|ref|YP_001924704.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium populi BJ001]
 gi|179344757|gb|ACB80169.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium populi BJ001]
          Length = 388

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 46/364 (12%), Positives = 108/364 (29%), Gaps = 33/364 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   + +N             ++  A+K   A  +   L +      ++S+ E+ 
Sbjct: 21  PVMVLDLDVVRDNYTAFARAL--PDTRVFYAVKANPAPEVLRLLAEMGSCFDTASVAEIE 78

Query: 65  LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKF---KDKAQKLHKKI 118
           +        E  ++      +   + A+         +  +++ K      +A      +
Sbjct: 79  MALAAGATAERVSFGNTIKKERDIVRALKLGIRLFAVDCQAEVEKILSATTQAGVAAADV 138

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFS 176
            +        +        +              +    +N  G+ FH   +  +   + 
Sbjct: 139 QVFCRILCDGAGADWPLSRKFGCEPEMAVNVLEHAHRHGLNAYGVSFHVGSQQANTEAWD 198

Query: 177 AMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSV 227
             L +  + F         +  ++LGGG                    + L +       
Sbjct: 199 GALASASQIFRECALRGIGLSMVNLGGGFPTKYLKQVPGVESYGDAIFRALTKHFGNRIP 258

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENI---------KNLVIVDSSVEAHVPDYLLYQES 278
           +  +EPG  +V N   +   V+ +S+              +     +   + + + Y   
Sbjct: 259 ETIIEPGRGMVGNAGMIEAEVVLVSKKSEAEDEVRWVYLDIGKFGGLAETMDESIRYA-I 317

Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-F 334
            T +        +V G +C + D+  E   +     + IGD++  E    Y        F
Sbjct: 318 KTDHDEDRMSPCVVAGPTCDSVDVLYEKNHYPLPVSLSIGDKVWIEGAGAYTTTYAAVAF 377

Query: 335 NGIN 338
           NG  
Sbjct: 378 NGFP 381


>gi|193706848|ref|XP_001946073.1| PREDICTED: ornithine decarboxylase-like isoform 1 [Acyrthosiphon
           pisum]
 gi|328700928|ref|XP_003241430.1| PREDICTED: ornithine decarboxylase-like isoform 2 [Acyrthosiphon
           pisum]
          Length = 459

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 58/362 (16%), Positives = 116/362 (32%), Gaps = 25/362 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y+ D   L++        +K   VK   A+KC     + +TL  +      +S  E+ 
Sbjct: 35  PFYIFDVGDLVHKARIWQ--QKLPRVKPFYAVKCNDNSLVLETLAAFGTNFDCASKAEIK 92

Query: 65  LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
              +         +            A+    D   F+   +L K K      +  I +R
Sbjct: 93  KVLDLGVNPSRIIFANPAKMTSHIKYAMSQCVDLTTFDNELELYKIKSIHPSCNLVIRIR 152

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
            + + +     +     P +               ++ G+ FH          F   +  
Sbjct: 153 CDATETQCPLGIKYGCDPLTEAP-ALMSLARDLGLSIVGVSFHVGSGCNEPAAFRRAIAA 211

Query: 182 IEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ-----IYLE 232
               F          +  +++GGG     K   +      + +   ++        I  E
Sbjct: 212 SAAIFRLAQQLGFMNMYLLNIGGGFPGN-KSTSLDKIADIVNDALNEWFPPNNGVTIIAE 270

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDS--------SVEAHVPDYLLYQESATIYPN 284
           PG   V +  TL+T +  I +   +   +          S  + + D+ +          
Sbjct: 271 PGRFFVASAFTLSTKIHSIKKRSNDENHIMYFINDGVYGSFNSILYDHSVVVPKPLNDYP 330

Query: 285 TGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343
             P     + G +C   D   +      +++GD I+F+D+  Y I   + FNG  +P + 
Sbjct: 331 MSPVCQSSIWGPTCDGLDQVVDLVNLPLMRMGDWITFDDMGAYTIPVASTFNGFPLPKVF 390

Query: 344 VK 345
             
Sbjct: 391 AV 392


>gi|237797832|ref|ZP_04586293.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331020682|gb|EGI00739.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 324

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 50/294 (17%), Positives = 95/294 (32%), Gaps = 19/294 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +                 +  A+K  +  G+ + L +   G    S  E
Sbjct: 26  GTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH--KK 117
           +          E   ++     ++    A+          +  +L + +D A +L+    
Sbjct: 86  LERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQDVAAELNVRAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           I LR+NP V              ++ G       +  I+        V G+  H   +  
Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAEDVYIRASQLPNLEVIGVDCHIGSQLT 205

Query: 171 SFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
           +   F   L  + +     G     +  I LGGG+    +D         +K   E+ + 
Sbjct: 206 TLEPFIDALDRLLQLVDRLGDCGIHLHHIDLGGGLGVRYRDEEPPLAADYIKAVRERLAG 265

Query: 228 Q---IYLEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQE 277
           +   +  EPG  IV N   L + V  +         IVD+++   +   L    
Sbjct: 266 RDLGLLFEPGRFIVANAGVLLSRVEYLKHTEHKDFAIVDAAMNDLIRPALYQAW 319


>gi|3360285|gb|AAC27893.1| ornithine decarboxylase [Haemonchus contortus]
          Length = 422

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 52/376 (13%), Positives = 109/376 (28%), Gaps = 39/376 (10%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67
           ++     +          +   ++   A+KC     +  TL     G   +S  E+ +  
Sbjct: 50  VVSTDSFVKR--------ELPMIEPFYAVKCNTDRVLVRTLAALGTGFDCASREEIDIVM 101

Query: 68  E-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
           +     E   Y    K       A   N   + F++  +L K      +    + + ++ 
Sbjct: 102 DLGVSAERIVYANPCKTRSFITHAKERNVSMMTFDSAEELAKVAQLHPQAKMILRIAVSD 161

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             +     L     P     +      +    +V G+ FH          +   L +   
Sbjct: 162 PTARCPLNLKFGADPVKMAPQLLVHA-QELGVDVIGISFHVGSGCNDPTAYREALAHARH 220

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ-----IYLEPGEA 236
                      +  + LGGG   T +    +D    ++   ++Y        +  EPG  
Sbjct: 221 LIELGRGLGLDMTLVDLGGGYPGTPQQTSFEDIAAVIRSAVDEYLPPEFGVRLIAEPGRF 280

Query: 237 IVTNTTTLNTT------------------VLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
                 TL                     V +          V  S    + D++    +
Sbjct: 281 FAAAPFTLVCNIIHATEVSAEKITKRPEDVEERGFMYYVNDGVYGSFNCILFDHVQPVGT 340

Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
                    Y + + G +C + D   +    + + +G+ I + ++  Y  +    FNG  
Sbjct: 341 PLFDEIAQEYPSTIWGPTCDSLDKIEDQKLMRMMSVGEWIVYRNMGAYTCSASTTFNGFQ 400

Query: 339 MP-TIAVKNVDGTIKA 353
            P  I + N     + 
Sbjct: 401 RPNAIYMINRKNWARI 416


>gi|116206602|ref|XP_001229110.1| hypothetical protein CHGG_02594 [Chaetomium globosum CBS 148.51]
 gi|88183191|gb|EAQ90659.1| hypothetical protein CHGG_02594 [Chaetomium globosum CBS 148.51]
          Length = 459

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 56/362 (15%), Positives = 102/362 (28%), Gaps = 34/362 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++        +      V+   A+KC     + + L+    G   +S  E+  
Sbjct: 80  FFVADLGEVYR--QHLRWKLNLPRVRPFYAVKCNPDTRLLELLSALGTGFDCASKSEIEQ 137

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                       Y    K               + F+   +L+K          ++ LRI
Sbjct: 138 VLNLGVDPSRIIYAQPCKTNSYVRYVAQKGVRQMTFDNADELHKIARLY--PDAELFLRI 195

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
               S S   L+          +           NV G+ FH          F   +++ 
Sbjct: 196 LTDDSSSLCRLSLKFGASLDSTDSLLALASELGLNVVGVSFHVGSGASDPGAFLKAVRDA 255

Query: 183 EKEF---GHFITQIEWISLGGGIHFTDKDYPVKD--FCQRLKEFSEKYSVQIYLEPGEAI 237
            + F         ++ + +GGG    +    +         + F     + +  EPG   
Sbjct: 256 HEVFQQAASHGFSLQTLDVGGGFCSDNTFEQMAGVLRAALDEYFPAHLGINLIAEPGRYY 315

Query: 238 VTNTTTLNTTVLD-------------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
            +   TL   V+              +  N        S +  H         S      
Sbjct: 316 ASTAFTLACNVIARRTIEDMSAASYMVYVNDGLYGNFSSIMFDHQHPIAKVLRSGGRTMY 375

Query: 285 TGP--------YTAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFEDVAGYNINRKNWFN 335
             P            + G +C   D   E   F + + +GD + FED+  Y       FN
Sbjct: 376 NTPAADATDDGIEYSIWGPTCDGIDRITESIRFPRLLDVGDWLYFEDMGAYTKCSATTFN 435

Query: 336 GI 337
           G 
Sbjct: 436 GF 437


>gi|154308241|ref|XP_001553457.1| hypothetical protein BC1G_07866 [Botryotinia fuckeliana B05.10]
 gi|150852951|gb|EDN28143.1| hypothetical protein BC1G_07866 [Botryotinia fuckeliana B05.10]
          Length = 441

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 56/360 (15%), Positives = 103/360 (28%), Gaps = 31/360 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           ++++D  ++        + +    VK   A+KC     +   L +   G   +S  E+  
Sbjct: 64  FFVVDLGEVYR--QHMRWKKNLPRVKPFYAVKCNPDPQVIRLLAELGTGFDCASKGEIEQ 121

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             +         Y    K        ++         +    +K K      ++ LRI+ 
Sbjct: 122 VLKMGIDPNYIIYAQPCKTSSYIRYAADQGIKQMTFDNGDELYKIKKLFPDAELFLRIST 181

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S S   L+                 +S   N+ G+ FH        L F   +++   
Sbjct: 182 DDSSSLSPLSLKFGAAMNATNDLLALAKSLGLNIVGVSFHVGSGASDPLAFRKAVQDAHS 241

Query: 185 EFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            F         +  + +GGG      +       + L EF   + + I  EPG   V+  
Sbjct: 242 VFEQALTHGYHLHTLDIGGGFCTEIFELMTDTLSKALDEFMPSH-INIIGEPGRYYVSKA 300

Query: 242 TTLNTTVLDISENIKN---------------LVIVDSSVEAHVPDYLLYQESATIYPNTG 286
            TL   ++                              V  H         + +      
Sbjct: 301 FTLACNIIARRTIKDPVSSDKSYMLYLNDGLYGNFSGIVFDHRNPVARVLRAGSFTCFDS 360

Query: 287 --------PYTAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                        + G +C   D       F+  + +GD + FED+  Y       FNG 
Sbjct: 361 LTNQETVDGIQYSIWGPTCDGIDRISANICFDHNLDVGDWLYFEDMGAYTKCCVTRFNGF 420


>gi|474032|emb|CAA47166.1| ornithine decarboxylase [Drosophila melanogaster]
          Length = 393

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 47/357 (13%), Positives = 96/357 (26%), Gaps = 24/357 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
             + D   L   L     +     ++   A+KC     +   L     G   +S  E+ L
Sbjct: 33  LNICDLSSLERKLRLWHKLMPR--IEPHYAVKCNDDPVVVKFLADLGTGFDCASKNELKL 90

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   +    +             +     ++   +K +       + +R   
Sbjct: 91  VLGFGVSPERIIFAHPCRPASHLRYAKEQQVVNGTVDNEYEIYKLRKHYPDSSLIVRFKS 150

Query: 125 S-VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
                   +                   ++    V G  FH          +   ++  E
Sbjct: 151 EAKKALCPLGDKYGCDAEADAAALMLLAKALGLKVTGTSFHVGSGCSEVEAYDRAIEKAE 210

Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEKYSVQIYLEPGEAI 237
             F        ++E + +GGG    D +   +        ++       ++I  EPG   
Sbjct: 211 NIFKVGEMIGHKMELLDVGGGFPGIDDEMFKEIAQSVNTSVELRFPDKRIRIISEPGRFF 270

Query: 238 VTNTTTLNTTV---LDISENIKNLVIVDSSVEAHVPDYLL-YQESATIYPNT-------- 285
           V    TL   V    ++      L  +   +   +                         
Sbjct: 271 VEAAYTLICKVHAKREVRSKDGKLDTMMYYLNDGIFGAFAGMFYYPEEVAPELYLDEAES 330

Query: 286 -GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                +++ G SC A D          +  GD + F ++  Y +   + FNG ++P 
Sbjct: 331 LPKLKSVIWGPSCDALDKI-SDLLLPNLNPGDLLGFRNMGAYTMPIASPFNGFDVPE 386


>gi|163851469|ref|YP_001639512.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium extorquens PA1]
 gi|163663074|gb|ABY30441.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium extorquens PA1]
          Length = 388

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 48/371 (12%), Positives = 114/371 (30%), Gaps = 34/371 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   +  N             ++  A+K   A  +   L +      ++S+ E+ 
Sbjct: 21  PVMVLDLDVVRENYTAFARAL--PDTRVFYAVKANPAAEVLRLLAEMGSCFDTASVAEIE 78

Query: 65  LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG-- 119
           +        +  ++      +   + A+         +  +++ K    ++      G  
Sbjct: 79  MALAAGATADRVSFGNTIKKERDVVRALKLGIRLFAVDCQAEVEKIVRASEAAGIAAGEV 138

Query: 120 ---LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
               RI    + + + L+        +     +       N  G+ FH   +  +   + 
Sbjct: 139 QVFCRILCDGAGADWPLSRKFGCEPEMAVNVLEHAHRHGLNAYGVSFHVGSQQANTEAWD 198

Query: 177 AMLKNIEKEFGHF---ITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSV 227
             L +  + F         +  ++LGGG            +       + L +       
Sbjct: 199 GALASASEIFRECALRGIGLSMVNLGGGFPTKYLKQVPGVETYGDAIFRALTKHFGNRIP 258

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENI---------KNLVIVDSSVEAHVPDYLLYQES 278
           +  +EPG  +V N   +   V+ +S+              +     +   + + + Y   
Sbjct: 259 ETIIEPGRGMVGNAGLIEAEVVLVSKKSEAEDEVRWVYLDIGKFGGLAETMDESIRYAIR 318

Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-F 334
                +      +V G +C + D+  E   +     + IGD++  E    Y        F
Sbjct: 319 TDHDEDRMA-PCVVAGPTCDSVDVLYEKNHYPLPVSLSIGDKVWIEGAGAYTTTYAAVAF 377

Query: 335 NGI-NMPTIAV 344
           NG   +  I +
Sbjct: 378 NGFPPLAQIVI 388


>gi|226313832|ref|YP_002773726.1| hypothetical protein BBR47_42450 [Brevibacillus brevis NBRC 100599]
 gi|226096780|dbj|BAH45222.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 423

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 57/391 (14%), Positives = 120/391 (30%), Gaps = 34/391 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           +Y++D +KL +N          +   V +  + K      +   L+Q        S  E 
Sbjct: 18  FYVLDTEKLSDNYRRFQRAFTRRYEHVVVAYSYKTNYLPFLCQKLHQLGAHAEVVSRLEY 77

Query: 64  MLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK---I 118
            L  +      +  +N     + +I   L     I  ++ S++      A +  ++   I
Sbjct: 78  ELARKLGVDPASIIFNGPLKTEDDIHFALEQGSLINLDSFSEIPWVVAYAMQYPEQTFRI 137

Query: 119 GLRINPS---------VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN 169
           GLRIN            +  +            L +       +   +V GL  H +   
Sbjct: 138 GLRINVDLARGGVSPLQNGYEVSRFGFCVENGNLEKALSQLAVAPNVHVVGLHGHFSTNR 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD-------YPVKDFCQRLKEFS 222
              +              H   ++ +I +GGG                 +++ + +    
Sbjct: 198 SVGVYRQITRHLCRLGKQHLGERLAFIDIGGGFFGELPTSFGMTAAPTFEEYAEAITSVV 257

Query: 223 EK------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ 276
           ++      ++  + LEPG ++V +       V+D+ EN     ++      +V   +   
Sbjct: 258 KEELAELDHAPLLILEPGISLVADAVDFVCRVIDVKENKGERFVLVDGSIHNVKPTMHSH 317

Query: 277 ESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                           T  V G +C+  D   + +      IGD   F  V  Y +    
Sbjct: 318 LLPARLVCNRKPVPEATYHVVGYTCMEKDYLLQGYTGPLPDIGDYFVFGHVGAYTLVFNP 377

Query: 333 WFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
            F     P +   + +       + +   + 
Sbjct: 378 PFI-RERPPVLAIDGNEAFIVRGKETLQQFI 407


>gi|195029057|ref|XP_001987391.1| GH21896 [Drosophila grimshawi]
 gi|193903391|gb|EDW02258.1| GH21896 [Drosophila grimshawi]
          Length = 392

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 51/357 (14%), Positives = 103/357 (28%), Gaps = 25/357 (7%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
             + D   +               VK   A+KC     +  TL +   G   +S  E+  
Sbjct: 31  LNICDLSTVERMFQLWQQNMPR--VKPFYAVKCNDDPLILQTLAKLGAGFDCASKNEMKQ 88

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             +     E   +    +             +     ++   +K      +  + +R   
Sbjct: 89  VLDLDVEPERIIFANPCRPISHLEYAKKNQVLKCAVDNEFEIYKLHKHFPNSNLIVRFKS 148

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKI-ESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
               ++  L D     + +       + +S    V G+ FH          +   ++  +
Sbjct: 149 EAKKAQCPLGDKFGCDADIDASALMLLAKSLNLTVTGISFHVGSGCMESQAYERAIRKAK 208

Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ----IYLEPGEA 236
             F         +  + +GGG   +  D   +   + + +  ++Y       I  EPG  
Sbjct: 209 NLFKFGELLGYDMNLLDIGGGFPGS-NDEQFEKIAESINKAVQRYFPDERIKIISEPGRF 267

Query: 237 IVTNTTTLNTTVLDISE-----------NIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285
            V    TL   +    E                  V       + D+        +  ++
Sbjct: 268 FVAAAYTLVCKIHAKREVRDEAGKLDTVMYYLNDGVYGLFNCVLYDHQQVTAQHYLNDDS 327

Query: 286 GPYTAM--VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              T    + G SC A D   E      +  GD + F ++  Y +   + FNG  + 
Sbjct: 328 SLPTFKSLIWGPSCDALDKISENVSLPNLNRGDILGFPNMGAYTVPIASAFNGFPLA 384


>gi|159478827|ref|XP_001697502.1| ornithine decarboxylase 1 [Chlamydomonas reinhardtii]
 gi|158274381|gb|EDP00164.1| ornithine decarboxylase 1 [Chlamydomonas reinhardtii]
          Length = 542

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 56/360 (15%), Positives = 102/360 (28%), Gaps = 30/360 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV-M 64
           +Y++D   +               V    A+KC    G+   LN    G   +S  E+ M
Sbjct: 155 FYVVDLANVQRMFKAWRAAMPR--VVPFYAVKCNPEPGILKLLNALGAGFDCASKGELDM 212

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
           +           +    K           +       +     K        K  LRI  
Sbjct: 213 MLRMGVSPNRIIFAHPCKRASDIRYAREHNVQYTTFDTVSELHKIAQMNPDFKCVLRIRA 272

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
               ++  L           +      +     V G+ FH     ++   FS  ++N  K
Sbjct: 273 DDPDARVPLGLKYGAEVSEADVLLRTAKELGLQVVGVSFHVGSACQNLSTFSGAIENARK 332

Query: 185 EFGHFI---TQIEWISLGGGIHFTDKDY--------PVKDFCQRLKEFSEKYSVQIYLEP 233
            F         +E + +GGG      +                    F  +  V++  EP
Sbjct: 333 VFDEAGALGFNMELLDIGGGFTGHFDEMGNVMFGEIANTINAALATNFPPEMGVRVIAEP 392

Query: 234 GEAIVTNTTTLNTTV----------LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
           G      ++TL T V            + ++      +  S    + D           P
Sbjct: 393 GRYFAETSSTLLTPVYGQRDRVAADGSVKKDYWLTDGLYGSFNCILYDGQNPGYKVVRSP 452

Query: 284 NTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                T      + + G +C + D   +      ++ GD + + +   Y +     FNGI
Sbjct: 453 LMADSTDSRTFLSTLWGPTCDSADCVYKDVTLPVLRNGDWLMWNNAGAYTVAGACDFNGI 512


>gi|296161875|ref|ZP_06844676.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Burkholderia sp. Ch1-1]
 gi|295887894|gb|EFG67711.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Burkholderia sp. Ch1-1]
          Length = 402

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 48/375 (12%), Positives = 102/375 (27%), Gaps = 34/375 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP++  D+  +   +     +   +G+ L  ++K      +   L Q +DG   +S  E+
Sbjct: 29  TPFFAYDRMAIDIRVRELRSLLP-SGMHLHYSIKANPMPAVIHYLAQRVDGLDVASAQEM 87

Query: 64  MLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLR 121
            L        +   +    K  E           +   + +QL        +L  +  + 
Sbjct: 88  ALALDAGTAPDAIGFAGPGKSHEDLRRAVASGINVHVESETQLRLVTALGWELGVQPRVA 147

Query: 122 INPSVSYSKFILADPNRPFSR-LGEKCKDK------IESEIKNVNGLMFHNNCENKS--- 171
           I  +  +            +   G            +E+    + G       +      
Sbjct: 148 IRVNPDFQVGNSGMRMGGGAAPFGMDVDQVPALLRELEAREVALAGFHVFWGSQCLHAAT 207

Query: 172 -FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSEKYS 226
                      I +        + +++LGGG             VK  C+ ++++     
Sbjct: 208 IIEAQRQSADLILRLASGLAQPLRFVNLGGGFGIPYFPGETPLDVKAVCEAMRDWLPPLC 267

Query: 227 VQ-----IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-----LLYQ 276
            +       LE G  +V         V+D   +     ++      H          + +
Sbjct: 268 ERLPGTTPILELGRYLVGEAGIYVCRVVDRKVSRGRTFVITDGGLHHQLAASGNFGQVLR 327

Query: 277 ESATIYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
            +  +     P         V G  C   D   +        IGD +  +    Y  +  
Sbjct: 328 RNFPVVIGNRPDGVPRERCHVVGCLCTPLDRLADDVELPEAHIGDFVVVKQSGAYGRSAS 387

Query: 332 N-WFNGINMPTIAVK 345
              F     P   + 
Sbjct: 388 PVHFLSHPEPVEMLV 402


>gi|149378202|ref|ZP_01895918.1| decarboxylase, ornithine/DAP/arginine decarboxylase family 2
           [Marinobacter algicola DG893]
 gi|149357526|gb|EDM46032.1| decarboxylase, ornithine/DAP/arginine decarboxylase family 2
           [Marinobacter algicola DG893]
          Length = 391

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 57/359 (15%), Positives = 119/359 (33%), Gaps = 26/359 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP  +ID   +    D  +     A   +  A+K   A  +   L         +S+YE
Sbjct: 29  DTPCVVIDTATINRQYDELVEGFPYAN--VYYAVKANPAPQVLTMLRDKGASFDIASVYE 86

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +         G+  +Y    K  +           ++ T S+ +  ++ A+         
Sbjct: 87  LDKVMGLGVTGDRISYGNTIKKAKDIRTFYERGVRLYATDSEAD-LRNIAKAAPGSKVYV 145

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179
              +            +   +        I +    +   G+ FH   + +    + A L
Sbjct: 146 RILTEGTLTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGVSFHVGSQQREIGAWDAAL 205

Query: 180 KNIEKEF----GHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYS----VQI 229
             ++  F         +++ I++GGG       +   +K + + +K F ++       +I
Sbjct: 206 GKVKVIFERLKEEDGIELKMINMGGGFPANYITRTNDLKTYAEEIKRFLDEDFGDDLPEI 265

Query: 230 YLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
            +EPG ++++N   L + V+ IS        + +          +       +       
Sbjct: 266 IIEPGRSLISNAGVLVSEVVLISRKSRTALHRWVFTDVGKFGGLIETLDESIKFPIFTEK 325

Query: 285 TGP-YTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRKN-WFNGIN 338
           +G     ++ G +C + DI  E H       + IGDR+ +     Y        FNG  
Sbjct: 326 SGEGEDCVIAGPTCDSADIMYEHHKYPLPLNLAIGDRMYWLSTGAYTTTYSAIEFNGFP 384


>gi|258590920|emb|CBE67215.1| putative Diaminopimelate decarboxylase [NC10 bacterium 'Dutch
           sediment']
          Length = 435

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 59/395 (14%), Positives = 118/395 (29%), Gaps = 38/395 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           + TP  +    ++ +N+       + +   V++  ALK     G+   L Q        S
Sbjct: 48  LGTPLLIYSSARVRDNIAAVAAAAEASPWPVRIHFALKACYLAGVVSLLQQAGLNVEVMS 107

Query: 60  LYEVMLGHE-KFGGE-THAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
            YE +L     F          A +      AV+     I   ++S++   +   Q+L +
Sbjct: 108 EYEYVLARRIGFSPNQVIVNGPAKRPEFLERAVIDGVALINVESLSEMTFLQGLGQRLGR 167

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNC 167
            I + I  +   S+ +      P S+ G            K    S   ++  +  H   
Sbjct: 168 IIEVGIRINPLLSQRLRGPFTPPGSKFGFDVPSGEAAAAVKRIARSRSLSLQAVHCHGYT 227

Query: 168 ENKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223
                    A +  + K           +I  +  GGG              Q+      
Sbjct: 228 RQYRPDAHRAQVAAVVKFLRGVEADLGIRIPVLDFGGGFGSRYLMEAHGWTFQQFMREML 287

Query: 224 KY------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
                     Q+ +EPG  +V +T    T+VL     +    ++  +    +P     + 
Sbjct: 288 DPLAGLPGDRQVIIEPGRYLVNDTAACLTSVLTCKRTVHRRWVLVDTGRHILPPRENAEY 347

Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPV-------KIGDRISFEDVAGYNINR 330
                  +   T    G      D         P+       + GD ++  +   Y  + 
Sbjct: 348 VVMPCQASPGRTVYHVG------DFLCVPSEPVPLSVVGGVMRPGDLLAVFNAGAYTFSM 401

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              F G  +P   + +        ++ S  + +  
Sbjct: 402 AQNF-GEPIPNAILVDKGEWRWLFKKRSVEEQFMR 435


>gi|84385203|ref|ZP_00988235.1| putative diaminopimelate decarboxylase protein [Vibrio splendidus
           12B01]
 gi|84379800|gb|EAP96651.1| putative diaminopimelate decarboxylase protein [Vibrio splendidus
           12B01]
          Length = 400

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 61/354 (17%), Positives = 114/354 (32%), Gaps = 34/354 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV-M 64
            YL D   L  ++    ++     V+L  A K   +  +  TL  Y+DG  ++S  E+  
Sbjct: 28  AYLYDLDALEQHIKQMRHVLPK-NVELFYAAKANPSEPILRTLAPYVDGFEAASGGELTH 86

Query: 65  LGHEKFGGETHAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IGLR 121
           L  ++                   A+  + D I   ++++L +     QKL++   I LR
Sbjct: 87  LHQQQLDKPLIFGGPGKMLSELEQAIELDVDAIHVESLTELQRIGSLTQKLNRPASIFLR 146

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKSFLC 174
           +N  +              +  G    +   + +         + G  FH          
Sbjct: 147 MNIDIGDITLSKLAMGGKPTPFGLDESELSNALMYLRDFPLIKLKGFHFHLMSHQLDVDR 206

Query: 175 FSAMLKNIEKEFGHFITQIE----WISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYS 226
             A+++   +    +          I+LGGG+        + +P  +FC +L+    K  
Sbjct: 207 HLALMQRYFQVVKEWKKTFSLDELIINLGGGMGINYQNPKQHFPWMEFCDKLEFLISKEH 266

Query: 227 ---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282
               ++  E G  I          VLDI +N+    ++      H         +     
Sbjct: 267 LQDWKLRFECGRYISAPCGYYVMEVLDIKQNLGENFVIARGGTHHFRTPAAQGHDHPFAI 326

Query: 283 PNTGPY----------TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
                           TA + G+ C   D+         + IGD + F     Y
Sbjct: 327 LKNKQQPTISNPIDQTTATLVGQLCTPKDVLARNQNIDHIDIGDYVVFTLAGAY 380


>gi|294811317|ref|ZP_06769960.1| Decarboxylase [Streptomyces clavuligerus ATCC 27064]
 gi|326439949|ref|ZP_08214683.1| pyridoxal-dependent decarboxylase [Streptomyces clavuligerus ATCC
           27064]
 gi|294323916|gb|EFG05559.1| Decarboxylase [Streptomyces clavuligerus ATCC 27064]
          Length = 542

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 58/411 (14%), Positives = 111/411 (27%), Gaps = 57/411 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+ D  ++   L+           ++  +LK     G+   L +       +S  E
Sbjct: 17  GSPLYIYDLARVRAALEDLRAALPQP-SRIYYSLKANPHPGLVAELRRGGARAEVTSRGE 75

Query: 63  VMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL-HKKI 118
           +    E         Y+     +    +AV +   T    +   L +    A        
Sbjct: 76  LAAALEAGHPAAELMYSGPGKVRAELDEAVAAGMRTFSAESFGDLERIGAAAAAQGVTAD 135

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKS- 171
            +    +               S+ G            +  +   + G+ F      +  
Sbjct: 136 CVLRINAAGAPGQAGLRMTGGPSQFGFDLDGLTEQRARLLVQGTRIVGMHFFPLTNARDE 195

Query: 172 ---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK 224
                  +  ++   +        +  + LGGG         +    +     L    ++
Sbjct: 196 AGLLAELAQSVRTAAQLREELGIPLHLLDLGGGFSAPYATPGERPVYRGLRTALSTVLDE 255

Query: 225 YSVQI-------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH--------- 268
           +             E G  +V ++  L  TV D+  +  +   V  S   H         
Sbjct: 256 HLPGWRDGEPVVAFESGRYLVGDSGRLVVTVTDVKHSRGSDYAVLDSGINHLGGLSGLGR 315

Query: 269 ---------VPDYLLYQ--------ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP 311
                    VP  L  Q               +  P T  + G  C   DI         
Sbjct: 316 LLPLSAQPLVPPVLPDQGAGAAETDGKTDGETDGEPGTVTLAGPLCTPADILARAAELPG 375

Query: 312 VKIGDRISFEDVAGYNINRK-NWFNGINMPTIAVKNVDGTI----KAIREF 357
           V  GD + F +V  Y ++     F G   P   + +   T+     A+R  
Sbjct: 376 VAAGDLLVFPNVGAYGLSASLLGFLGHPAPAEVLVDGGETVSATRLALRRQ 426


>gi|254393792|ref|ZP_05008907.1| decarboxylase [Streptomyces clavuligerus ATCC 27064]
 gi|197707394|gb|EDY53206.1| decarboxylase [Streptomyces clavuligerus ATCC 27064]
          Length = 531

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 58/411 (14%), Positives = 111/411 (27%), Gaps = 57/411 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+ D  ++   L+           ++  +LK     G+   L +       +S  E
Sbjct: 6   GSPLYIYDLARVRAALEDLRAALPQP-SRIYYSLKANPHPGLVAELRRGGARAEVTSRGE 64

Query: 63  VMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL-HKKI 118
           +    E         Y+     +    +AV +   T    +   L +    A        
Sbjct: 65  LAAALEAGHPAAELMYSGPGKVRAELDEAVAAGMRTFSAESFGDLERIGAAAAAQGVTAD 124

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKS- 171
            +    +               S+ G            +  +   + G+ F      +  
Sbjct: 125 CVLRINAAGAPGQAGLRMTGGPSQFGFDLDGLTEQRARLLVQGTRIVGMHFFPLTNARDE 184

Query: 172 ---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK 224
                  +  ++   +        +  + LGGG         +    +     L    ++
Sbjct: 185 AGLLAELAQSVRTAAQLREELGIPLHLLDLGGGFSAPYATPGERPVYRGLRTALSTVLDE 244

Query: 225 YSVQI-------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH--------- 268
           +             E G  +V ++  L  TV D+  +  +   V  S   H         
Sbjct: 245 HLPGWRDGEPVVAFESGRYLVGDSGRLVVTVTDVKHSRGSDYAVLDSGINHLGGLSGLGR 304

Query: 269 ---------VPDYLLYQ--------ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP 311
                    VP  L  Q               +  P T  + G  C   DI         
Sbjct: 305 LLPLSAQPLVPPVLPDQGAGAAETDGKTDGETDGEPGTVTLAGPLCTPADILARAAELPG 364

Query: 312 VKIGDRISFEDVAGYNINRK-NWFNGINMPTIAVKNVDGTI----KAIREF 357
           V  GD + F +V  Y ++     F G   P   + +   T+     A+R  
Sbjct: 365 VAAGDLLVFPNVGAYGLSASLLGFLGHPAPAEVLVDGGETVSATRLALRRQ 415


>gi|311696676|gb|ADP99549.1| ornithine decarboxylase [marine bacterium HP15]
          Length = 391

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 58/359 (16%), Positives = 115/359 (32%), Gaps = 26/359 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+ +ID   +    D  +        K+  A+K   A  +   L         +S+YE
Sbjct: 29  ETPFVVIDTATIDRQYDELVEGFPY--AKVYYAVKANPAPQILTMLRDKGASFDIASVYE 86

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +         GE  +Y    K  +           +F T S+ +  ++ A+         
Sbjct: 87  LDKVMALGVTGERISYGNTIKKAKDIRTFYEKGVRMFATDSEAD-LRNIAKAAPGSKVYV 145

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179
              +            +   +        I +    +   G+ FH   + +    + A L
Sbjct: 146 RILTEGTLTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGVSFHVGSQQREIGAWDAAL 205

Query: 180 KNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSVQI 229
             ++  F         +++ I++GGG                ++  + L E       +I
Sbjct: 206 NKVKVIFERLKEEDGIELKMINMGGGFPANYITRTNELKVYAEEIARFLHEDFGAELPEI 265

Query: 230 YLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
            +EPG ++++N   L + V+ IS        + +          +       +       
Sbjct: 266 IIEPGRSLISNAGVLVSEVVLISRKSRTALHRWVFTDVGKFSGLIETLDEAIKFPIWTEK 325

Query: 285 TGP-YTAMVCGRSCLAGDIFGEFHFEK---PVKIGDRISFEDVAGYNINRKN-WFNGIN 338
            G     ++ G +C + DI  E H       + IGDR+ +     Y        FNG  
Sbjct: 326 VGEGEDCVIAGPTCDSADIMYEHHKYPLPLNLAIGDRMYWLSTGAYTTTYSAIEFNGFP 384


>gi|170694158|ref|ZP_02885313.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Burkholderia graminis C4D1M]
 gi|170140898|gb|EDT09071.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Burkholderia graminis C4D1M]
          Length = 402

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 43/375 (11%), Positives = 96/375 (25%), Gaps = 34/375 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP++  ++  +   +     +    GV L  ++K      +   L   +DG   +S  E+
Sbjct: 29  TPFFAYERAAIDTRIRELRSLLP-PGVHLHYSIKANPMPAVVHYLAARVDGFDVASAQEM 87

Query: 64  MLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            +            +        ++   +S+   +   + +QL        +L  + G+ 
Sbjct: 88  AVALNAGAAPADIGFAGPGKSYDDLRRAISSGVNVHVESETQLRLVTALGWELGVQPGVA 147

Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLC 174
           I  +                +  G            +++    + G       +      
Sbjct: 148 IRINPDFEVGRSGMRMGGGAAPFGVDVDQVPALLRELQARQVALAGFHIFWGSQCLDAAT 207

Query: 175 FSAMLKNIEKEFGHFITQI----EWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY----- 225
                +            +     +++LGGG              Q + E    +     
Sbjct: 208 VIQAQRQSADLVARLARGLSEPPRFVNLGGGFGIPYFPGETPLNVQAVCEAMHDWLPRLC 267

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-----LLYQ 276
                +   LE G  +V         V+D   +     ++      H          + +
Sbjct: 268 ERVSGMTPILELGRYLVGEAGIYVCRVIDRKVSRGRTFVITDGGLHHHLAASGNFGQVLR 327

Query: 277 ESATIYPNTGP-----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
            +  +     P         V G  C   D   +        IGD +       Y  +  
Sbjct: 328 RNFPVVIGNRPDGVPQQRCHVVGCLCTPLDRLADDIELPEAHIGDLVVVRQSGAYARSAS 387

Query: 332 N-WFNGINMPTIAVK 345
              F     P   + 
Sbjct: 388 PLHFLSHPEPVEMLV 402


>gi|307133129|ref|YP_003885145.1| diaminopimelate decarboxylase [Dickeya dadantii 3937]
 gi|19571822|emb|CAD27340.1| lysA-like protein [Erwinia chrysanthemi]
 gi|306530658|gb|ADN00589.1| Diaminopimelate decarboxylase [Dickeya dadantii 3937]
          Length = 440

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 48/398 (12%), Positives = 103/398 (25%), Gaps = 35/398 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP+Y+    + L      L  +   G  +  +LK      +   L +   G    S  
Sbjct: 33  IGTPFYVYS-ARQLRRQLQQLRQQLPTGTAIYYSLKANPNLSVVRALAEQGAGCEVCSPA 91

Query: 62  EVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+          +   Y    K       A+      I+  +V++L+     A + +   
Sbjct: 92  ELKTALAAGVSPQHILYVGPGKSLPALKLAIDCGIRAIVVESVTELDNLNRLAARANTVQ 151

Query: 119 GLRINPSVSYSK-FILADPNRPFSRLGEKCKDK---IESEIKN----VNGLMFHNNCENK 170
            + +  +  +S        +   ++ G         + S  +     + G   +      
Sbjct: 152 TVALRINPDFSSAHARLVMSGKPTQFGMMRDTLHTVLASLHRWPSISLRGFHVYLGTRIL 211

Query: 171 S----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFS 222
           +          +L+            ++++ +GGG             +      +    
Sbjct: 212 NAQAIADNTRNILQLALDLRDTHRLTLDFVDVGGGFGVPYFPKETPLDLPALGAAIASIV 271

Query: 223 EKYSV-----QIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAH-------- 268
             +       QI +E G  +V       T V  +     K   + D     H        
Sbjct: 272 ADFRRRAADTQIIIELGRYLVAEAGLFVTRVNTLKTAGGKTFAVCDGGANCHSAAAGLNS 331

Query: 269 VPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
           +                      V G  C   D+ G+      +++ D I       Y +
Sbjct: 332 MLRKNFPLLRLGDNQGRPLQPYQVSGPLCTPTDLLGDNVLLPTLEVDDLIGITHSGAYGL 391

Query: 329 NRKN-WFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
                 F     P   + +        +  +       
Sbjct: 392 TASPGSFLSFGYPVEVMVDGRRLTLIRQPETTEQLLAR 429


>gi|325295056|ref|YP_004281570.1| diaminopimelate decarboxylase [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065504|gb|ADY73511.1| Diaminopimelate decarboxylase [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 451

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 64/394 (16%), Positives = 119/394 (30%), Gaps = 32/394 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P ++  ++KL             +   V+   + K      +   L+   +     S 
Sbjct: 49  GSPLFVFSERKLRQKFREIKNAFTLRYPNVEFSWSYKTNYLDAICAILHSEGETAEVVSE 108

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKI 118
           +E     +    G    YN  YK  E   V +     I  +   ++   +  A +L  K+
Sbjct: 109 FEYEKARKLGVEGNQIIYNGPYKPIESLRVAAAEGARINIDHFEEIADLEQVADELGVKV 168

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKC---KDKIESEIKNVNGLMFHNNCENKSFLCF 175
              I  ++                 G+     K         +NGL  H          +
Sbjct: 169 KAGIRLNMDTGIHPQWTRFGFNLENGQAWDAVKRIASGGKIELNGLHCHIGTFILEPKAY 228

Query: 176 SA----MLKNIEKEFGHFITQIEWISLGGGIHFTD----------------KDYPVKDFC 215
                 M++   K    F  ++E+I +GGG    +                 ++  +   
Sbjct: 229 ENEVRKMVEFAYKIEDEFGFKVEYIDIGGGFPSKNRLRGIYLPPDVSVPSIDEFAERVCN 288

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLL 274
             L         ++ +E G AIV     L TTV             V  +    +     
Sbjct: 289 TLLSSLRPGDYPKLIVESGRAIVDEAGFLITTVHAAKRMPDGKRAYVLDAGVNILFTAFW 348

Query: 275 YQESATIYPNTG--PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
           Y  +  I           ++ G  C+  D+  +  +  P+  G R+    V  YN+ +  
Sbjct: 349 YHFNIEIDREVQGLTEPCILYGPLCMNIDVVDDLVYLPPLPRGTRLVISPVGAYNVTQWM 408

Query: 333 WFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNN 365
            F     P + +   +G I  IRE    +D    
Sbjct: 409 QFIRY-KPAVVLIGDNGEIDVIREAEDLSDITGR 441


>gi|332850067|ref|ZP_08432454.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein
           [Acinetobacter baumannii 6013150]
 gi|332871508|ref|ZP_08440002.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein
           [Acinetobacter baumannii 6013113]
 gi|193078056|gb|ABO12988.2| putative ornithine decarboxylase [Acinetobacter baumannii ATCC
           17978]
 gi|332730916|gb|EGJ62222.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein
           [Acinetobacter baumannii 6013150]
 gi|332731362|gb|EGJ62654.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein
           [Acinetobacter baumannii 6013113]
          Length = 386

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 52/360 (14%), Positives = 112/360 (31%), Gaps = 30/360 (8%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+ ++D   +  +              +  ALK   A  + + L +       +S+ E+
Sbjct: 24  TPFLVLDLSVIEKHYLELKQGF--PNADIYYALKANPANEVIERLCRIGSSFDLASVNEL 81

Query: 64  MLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIGL 120
                        A+    K                + ++ + LN     A        L
Sbjct: 82  KKVQAFGVDASRLAFGNTIKKRADIQYFYEQGIRLYVTDSDADLNNIAQYAPGSKVFFRL 141

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAM 178
            I+              +         +  ++++   +   G+ FH   + +    + + 
Sbjct: 142 SID---GSETADWPLSGKFGCNAECVIRLAVKAKELGLIPYGISFHVGSQQRKIDLWDSA 198

Query: 179 LKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQ 228
           L   +  F          ++ ++LGGG+                     L+ F      Q
Sbjct: 199 LAETKAIFDVLVNDHQIHLKMLNLGGGLPAQYVQQTEAFASYSKQINAALEMFKPYQLEQ 258

Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATIYP 283
           I LEPG ++V N   L + ++ IS+  +      +          +       +   +  
Sbjct: 259 IILEPGRSLVGNAGILVSEIVLISQRPQSGTKRWVYTDVGVFNGLIETLGEAIQYPIVCK 318

Query: 284 NTGP-YTAMVCGRSCLAGDIFG---EFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338
            TG     ++ G +C + DI     ++     ++IGD + +     Y  +  +  FNG  
Sbjct: 319 KTGQSDDIILAGPTCDSMDIMYQNKKYELPLSLEIGDHLYWLSTGAYTTSYSSIEFNGFP 378


>gi|240138634|ref|YP_002963106.1| putative ornithine/diaminopimelate PLP-dependent decarboxylase
           [Methylobacterium extorquens AM1]
 gi|240008603|gb|ACS39829.1| putative ornithine/diaminopimelate PLP-dependent decarboxylase
           [Methylobacterium extorquens AM1]
          Length = 388

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 48/371 (12%), Positives = 115/371 (30%), Gaps = 34/371 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   + +N             ++  A+K   A  +   L +      ++S+ E+ 
Sbjct: 21  PVMVLDLDVVRDNYTAFARAL--PDTRVFYAVKANPAAEVLRLLAEMGSCFDTASVAEIE 78

Query: 65  LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG-- 119
           +        +  ++      +   + A+         +  +++ K    ++      G  
Sbjct: 79  MALAAGATADRVSFGNTIKKERDVVRALKLGIRLFAVDCQAEVEKIVRASEAAGIAAGEV 138

Query: 120 ---LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
               RI    + + + L+        +     +       N  G+ FH   +  +   + 
Sbjct: 139 QVFCRILCDGAGADWPLSRKFGCEPEMAVNVLEHAHRHGLNAYGVSFHVGSQQANTEAWD 198

Query: 177 AMLKNIEKEFGHF---ITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSV 227
             L +  + F         +  ++LGGG            +       + L +       
Sbjct: 199 GALASASEIFRECALRGIGLSMVNLGGGFPTKYLKQVPGVETYGDAIFRALTKHFGNRIP 258

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENI---------KNLVIVDSSVEAHVPDYLLYQES 278
           +  +EPG  +V N   +   V+ +S+              +     +   + + + Y   
Sbjct: 259 ETIIEPGRGMVGNAGLIEAEVVLVSKKSEAEDEVRWVYLDIGKFGGLAETMDESIRYAIR 318

Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-F 334
                +      +V G +C + D+  E   +     + IGD++  E    Y        F
Sbjct: 319 TDHDEDRMA-PCVVAGPTCDSVDVLYEKNHYPLPVSLSIGDKVWIEGAGAYTTTYAAVAF 377

Query: 335 NGI-NMPTIAV 344
           NG   +  I +
Sbjct: 378 NGFPPLAQIVI 388


>gi|324507907|gb|ADY43343.1| Ornithine decarboxylase [Ascaris suum]
          Length = 415

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 56/378 (14%), Positives = 109/378 (28%), Gaps = 32/378 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y++   KL+              ++   A+KC     +   L +   G   +S  E + 
Sbjct: 23  FYVMSVNKLVTRFMEWKRYLPR--IEPFYAVKCNDDPVVLKVLTKLGCGLDVASKAEFVQ 80

Query: 66  GHEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
             +    E   Y    K               + F++V +LNK      +    + +   
Sbjct: 81  AVKLVSTEKIVYANPVKTKSFIKRAKELGISMMTFDSVDELNKVAVLHPEARMILRIAT- 139

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
                   +           G K           V G+ FH   +      F   +    
Sbjct: 140 DDTQARCPLSMKFGCEPITDGPKLLKVAAELGIRVVGISFHVGSDRNDPTAFYEPINQAR 199

Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRL------KEFSEKYSVQIYLEPG 234
           K F        ++  + +GGG    D   P       +      K F    +++I  EPG
Sbjct: 200 KLFNIGLQLGHKMTILDVGGGFPGIDNASPSFINIADIVSSYIDKCFPANENIRIIAEPG 259

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-----HVPDYLLYQESATIYPNTGPY- 288
               T   +L T V+ +       +    +        ++ + +    +   +    P  
Sbjct: 260 RFFATAPFSLVTNVIGVKRVPAERISKTGTTHHDGFMYYMNEGIYGSFNCIYFDFAKPQG 319

Query: 289 ------------TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                          + G +C   D   +    + +  GD + ++D+  Y  +  + FNG
Sbjct: 320 KPLFDKEDEECAPCSIWGPTCDGFDQVEKRRIMRRLSTGDWLYYDDMGAYTRSAASMFNG 379

Query: 337 INMPTIAVKNVDGTIKAI 354
                        T K I
Sbjct: 380 FEKTRTYYFTDKNTWKLI 397


>gi|119945152|ref|YP_942832.1| ornithine decarboxylase [Psychromonas ingrahamii 37]
 gi|119863756|gb|ABM03233.1| ornithine decarboxylase [Psychromonas ingrahamii 37]
          Length = 392

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 62/365 (16%), Positives = 127/365 (34%), Gaps = 31/365 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TP+ +ID   + ++ D           ++  ALK   A  + D +N    G   +S Y
Sbjct: 24  VETPFVIIDSATVEDHFDALRNNF--PWAEIYYALKANPAHEIIDIVNNKEGGFDLASTY 81

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           E+          +  +Y    K         +    +F T S  +     A     K+ +
Sbjct: 82  ELDRVISHGTDPDLISYGNTIKKRADIKYFYDAGIRMFVTDSDADLANIAAMAPGAKVYV 141

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAM 178
           RI               +   +        ++++   +   G+ FH   + +    +   
Sbjct: 142 RILTE-GNLTADWPLSRKFGCQPDMAMDLLVKAQKLGLEPYGVSFHVGSQQRDIGAWDGA 200

Query: 179 LKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVK--DFCQRLKEFSEK----YSVQ 228
           +  ++  F         +++ I++GGG              +   ++ F  +       +
Sbjct: 201 IATVKVIFERLKSENNIELQMINMGGGFPAQYIHQTNTLAVYAAEIQRFLIEDFGATLPR 260

Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENI----KNLVIVDSSVEAHVPD-------YLLYQE 277
           I LEPG ++V N   L T V+ +S          V  D  + + + +       Y LY E
Sbjct: 261 IILEPGRSLVANAGILVTEVVQVSRKSNTALHRWVYTDVGLFSGMIETLGEAIKYPLYCE 320

Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIF---GEFHFEKPVKIGDRISFEDVAGYNINRKN-W 333
           +++          ++ G +C + DI     ++     +K GDR+ +     Y  +     
Sbjct: 321 TSSPGTGEESEEVVIAGPTCDSADILYEDYKYRLPHSLKEGDRLFWFSTGAYTTSYSAVE 380

Query: 334 FNGIN 338
           FNG  
Sbjct: 381 FNGFP 385


>gi|218530277|ref|YP_002421093.1| ornithine decarboxylase [Methylobacterium chloromethanicum CM4]
 gi|218522580|gb|ACK83165.1| Ornithine decarboxylase [Methylobacterium chloromethanicum CM4]
          Length = 388

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 48/371 (12%), Positives = 115/371 (30%), Gaps = 34/371 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   + +N             ++  A+K   A  +   L +      ++S+ E+ 
Sbjct: 21  PVMVLDLDVVRDNYTAFARAL--PDTRVFYAVKANPAAEVLRLLAEMGSCFDTASVAEIE 78

Query: 65  LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG-- 119
           +        +  ++      +   + A+         +  +++ K    ++      G  
Sbjct: 79  MALAAGATADRVSFGNTIKKERDVVRALKLGIRLFAVDCQAEVEKIVRASEAAGIAAGDV 138

Query: 120 ---LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
               RI    + + + L+        +     +       N  G+ FH   +  +   + 
Sbjct: 139 QVFCRILCDGAGADWPLSRKFGCEPEMAVNVLEHAHRHGLNAYGVSFHVGSQQANTEAWD 198

Query: 177 AMLKNIEKEFGHF---ITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSV 227
             L +  + F         +  ++LGGG            +       + L +       
Sbjct: 199 GALASASEIFRECALRGIGLSMVNLGGGFPTKYLKQVPGVETYGDAIFRALTKHFGNRIP 258

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENI---------KNLVIVDSSVEAHVPDYLLYQES 278
           +  +EPG  +V N   +   V+ +S+              +     +   + + + Y   
Sbjct: 259 ETIIEPGRGMVGNAGLIEAEVVLVSKKSEAEDEVRWVYLDIGKFGGLAETMDESIRYAIR 318

Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-F 334
                +      +V G +C + D+  E   +     + IGD++  E    Y        F
Sbjct: 319 TDHDEDRMA-PCVVAGPTCDSVDVLYEKNHYPLPVSLSIGDKVWIEGAGAYTTTYAAVAF 377

Query: 335 NGI-NMPTIAV 344
           NG   +  I +
Sbjct: 378 NGFPPLAQIVI 388


>gi|183178880|gb|ACC43928.1| ornithine decarboxylase [Malus hupehensis]
          Length = 425

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 53/362 (14%), Positives = 105/362 (29%), Gaps = 27/362 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y++D   L++ +           V    A+KC         L         +S  E+ 
Sbjct: 56  PFYVLDLGVLVSLMQKWNRCL--PNVLPFFAVKCNPEPAFIAALATLGASFDCASKVEIE 113

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                        Y    K        +        F+++ +LNK K    K    + + 
Sbjct: 114 AILSHGVSPSRIVYANPCKGENHLRHAAGVGVNLATFDSMDELNKIKGCHPKCSLLLRIA 173

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +    S  +            +    +         V G+ FH   +      +   +  
Sbjct: 174 VPNDTSSWRSFGTKFGVLSEEVAPLLRHA-HKLGLRVVGVSFHVGSKASESQVYRGAIAA 232

Query: 182 IEKEF----GHFITQIEWISLGGGIHFTD-KDYPVKDFCQRLKEFSEKYSVQ----IYLE 232
               F       + ++  + +GGG       D   +     +KE    +  +    +  E
Sbjct: 233 ARAAFDVADELKLPKVHVLDIGGGFKVNPLFDEIAETLNDAIKEHFGDHQSESDLVVMAE 292

Query: 233 PGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDYL----------LYQESAT 280
           PG        TL   V+   +    +   I D    +                L      
Sbjct: 293 PGRFFAETPFTLVANVMGKRVRGEKREYWITDGIYGSFNLPAFDKSCLTVSPLLLHTPDH 352

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
            + +   Y++ V G +C + D     +    +K+ D + F ++  Y  +    FNG  + 
Sbjct: 353 HHHSVAIYSSTVFGPTCDSLDTVVADYKLPELKLNDYLVFHNMGAYTSSAGTNFNGFCIS 412

Query: 341 TI 342
            I
Sbjct: 413 AI 414


>gi|196016998|ref|XP_002118347.1| hypothetical protein TRIADDRAFT_62377 [Trichoplax adhaerens]
 gi|190579063|gb|EDV19169.1| hypothetical protein TRIADDRAFT_62377 [Trichoplax adhaerens]
          Length = 391

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 62/364 (17%), Positives = 111/364 (30%), Gaps = 40/364 (10%)

Query: 22  LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH-EKFGGETHAYNVA 80
            +  +   V++  A+KC     +  TL         +SL E+          +   Y   
Sbjct: 6   QWKMRLRNVEIFYAMKCNNDPVLLRTLINLGVSFDCASLGEIQSILNAGVNPDRIIYANT 65

Query: 81  YKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNR 138
            K       A   N +  +F+   +L K K         I +  +  V  S+F L     
Sbjct: 66  IKAISHLRFAKEKNVNLTVFDNEDELYKIKKYHPNAKLAIRICPDMEVCESRFQLGIKFG 125

Query: 139 PFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEW 195
                     +  +S   NV G+ FH   +  + + +   +   ++ F     F      
Sbjct: 126 AAKADVAHLLEVAQSLKLNVVGVSFHVGSDCLTPIAYEKGIITSKQIFKLAEKFGYHFNL 185

Query: 196 ISLGGGIHFTDKDYPVKDFCQRL------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVL 249
           + +GGG                +      K F  +  V+I  EPG    T   TL   V+
Sbjct: 186 LDIGGGFTAFSALETTFAKAAAVISKALQKYFPPELGVRIIAEPGRYFATRACTLVLNVI 245

Query: 250 D--ISENIKNLVIVDSSVEAHVP--------------------------DYLLYQESATI 281
              +       +       AH+                           D+ L       
Sbjct: 246 GRRVVRKGNGDLFDFEHENAHLYKNTNDFEKVLYYVNDSVYGCLNILPIDHALITLKPVK 305

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
               G  TA++ G++C + D   +      +  GD + FE+   Y+++  + FN    P 
Sbjct: 306 SNTHGEETAVLFGQTCDSLDCLMKECLLPKLNAGDWVYFEETGAYSLSLASKFNSFKKPK 365

Query: 342 IAVK 345
               
Sbjct: 366 CYYY 369


>gi|326387492|ref|ZP_08209101.1| ornithine/diaminopimelate/arginine decarboxylase,family 2
           [Novosphingobium nitrogenifigens DSM 19370]
 gi|326208148|gb|EGD58956.1| ornithine/diaminopimelate/arginine decarboxylase,family 2
           [Novosphingobium nitrogenifigens DSM 19370]
          Length = 423

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 50/382 (13%), Positives = 104/382 (27%), Gaps = 34/382 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D  ++   +         + + +  A+K      +   +  ++DG   +S  E
Sbjct: 38  GTPLFVYDAGRIAGRVAALRAAMP-SELGIHYAVKANPFAPLLAFMAGHVDGFDIASGGE 96

Query: 63  VMLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           + L       G    +     +D E+   +    T+   +  +L++  +   +L     L
Sbjct: 97  LALLTSVGISGARIGFAGPGKRDGEMVEAVKAGVTLHLESPRELDRAIEVGARLGIAPRL 156

Query: 121 RINPSVS-YSKFILADPNRPFSRLGEKCKDKIESEIKNV------NGLMFHNNCENKSFL 173
            I  +                   G       +   + V       G   +   ++    
Sbjct: 157 AIRVNPDFELAGAGMRMGGGARPFGIDADQVPDLVRRIVASGAEWRGFHVYAGSQSLDSE 216

Query: 174 CFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY---- 225
             +A     +  + +        +   +LGGG               R+     +     
Sbjct: 217 AIAAAQAATIDCVARLADAAGVAVPVCNLGGGFGIPYFHGQHPLDIDRIGAELAERLASL 276

Query: 226 -----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-------- 272
                  +  LE G  +V       T +LD   +     +V      H            
Sbjct: 277 PASLAQTRFVLELGRWLVGEAGVYLTEILDRKISRGETFLVVDGGLHHQLAASGNFGSII 336

Query: 273 --LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                   AT +       A V G  C   D  G+       + GD ++      Y  + 
Sbjct: 337 RRNYPCAVATRFAAPAEEVAHVVGCLCTPLDRLGDALALPHAEPGDLVALFCAGAYGASA 396

Query: 331 K-NWFNGINMPTIAVKNVDGTI 351
             + F G       +   +  I
Sbjct: 397 SPSEFLGHGPARQVLVGHEDEI 418


>gi|320582680|gb|EFW96897.1| Ornithine decarboxylase [Pichia angusta DL-1]
          Length = 433

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 55/367 (14%), Positives = 102/367 (27%), Gaps = 38/367 (10%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+++ D  +L   +       +   V+ L A+KC     +  TL Q   G   +S  E+ 
Sbjct: 58  PFFVCDLGELKRLVRLWR--AEMPRVEPLYAVKCNNDEKLLHTLLQMGLGFDCASKTEIQ 115

Query: 65  LGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                        Y    K       A  +  +    ++V ++ K    A      + +R
Sbjct: 116 QMLSLGADPAKIIYANPCKAVPHVRYARQNGVNLTTVDSVDEVRKI--AAHHPDCGLLIR 173

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           I+   + +   L+       +       +      N+ G+ FH     K+F      +++
Sbjct: 174 IHTDDADATCPLSIKFGASLQEARILVQECAKLKLNLKGVAFHVGSGCKNFNTIETAVRD 233

Query: 182 IEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ---IYLEPGE 235
               F         ++ + +GGG            F   L             I+ E G 
Sbjct: 234 SRMVFDYAESLGYTLKMLDIGGGFSKATFHASAAVFRSALDTHFAAEEFPDLYIFSELGR 293

Query: 236 AIVTNTTTLNTTVLDI--------------------SENIKNLVIVDSSVEAHVPDYLLY 275
            +  +  TL   V                            +  +    + +H       
Sbjct: 294 FLAASCFTLAVNVTSKRSDAFQERIYVNDGVYGNLNCILFDHQEVEPKVLTSHGRFVFHS 353

Query: 276 QESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFE-KPVKIGDRISFEDVAGYNINR 330
             +                 V G +C   D         + V  GD + F+D   Y    
Sbjct: 354 NYNHPEKELAAAANPFKQYSVWGPTCDGLDCISPNCKLSQEVVAGDWLYFKDTGAYTSAA 413

Query: 331 KNWFNGI 337
              FNG 
Sbjct: 414 ATNFNGF 420


>gi|85714753|ref|ZP_01045740.1| probable diaminopimelate decarboxylase protein [Nitrobacter sp.
           Nb-311A]
 gi|85698638|gb|EAQ36508.1| probable diaminopimelate decarboxylase protein [Nitrobacter sp.
           Nb-311A]
          Length = 392

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 52/375 (13%), Positives = 98/375 (26%), Gaps = 35/375 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            YL D   L    DT       A  KL  A+K  +   +   L    DG   +SL E+  
Sbjct: 19  AYLYDLAHLRRRADTLRRCLP-AQCKLFYAIKANSDAPILRALLHRTDGFEVASLGEIQA 77

Query: 66  GHEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                      +    K               I   +  QL +    A++ +++  + + 
Sbjct: 78  VRGINDAVPVVFGGPGKTDAELEGALDQGVLLIHVESEHQLRRLDWIARRRNQRADILLR 137

Query: 124 PSV-SYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENKSFLCF 175
            +  S  +          ++ G +           +      + GL  H+   N      
Sbjct: 138 VNPASVPQQATLRMGGQATQFGIEEAQIPALIELALGLPGVRLRGLHIHSISNNLDAQTH 197

Query: 176 ----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSEKYSV 227
                            +  + +W++ GGGI     +    +  + FC  L         
Sbjct: 198 LALLEHYFDLTSTWQRRYQLEFDWLNAGGGIGINYANPQASFDWEGFCAGLAALIAARQP 257

Query: 228 QI--YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284
           +     E G  +  +       V D+         +      H             +   
Sbjct: 258 RFQLVFECGRFLTADCGYYLADVTDLKHTHGKHFAILRGGSHHFRLPASWQHNHPFVVLP 317

Query: 285 TGPYTAM------------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
              +               +CG  C   D        + ++ GD I+F     Y  +  +
Sbjct: 318 REAWPYPFSRPAVHETPVTLCGELCTPKDTLACDVRVERLRAGDCIAFLLAGAYGWHISH 377

Query: 333 W-FNGINMPTIAVKN 346
             F     P     +
Sbjct: 378 HDFLSHPHPERVYLD 392


>gi|258424237|ref|ZP_05687118.1| orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus A9635]
 gi|257845503|gb|EEV69536.1| orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus A9635]
          Length = 400

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 54/381 (14%), Positives = 107/381 (28%), Gaps = 36/381 (9%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66
           Y+ D  +L ++L         +  ++  A+K  +   + DT++QY++G   +S  E+  G
Sbjct: 21  YIYDLDELKSHLQHITSSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79

Query: 67  HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                     +       +    AV      I   ++ +L +     +   K   + +  
Sbjct: 80  LAFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRV 139

Query: 125 S-VSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE----NKSF 172
           +                ++ G          +  +     +++G  FH+       N   
Sbjct: 140 NLAGPFPNATLHMAGRPTQFGVSEDEVDDVIEAALAMSNIHLDGFHFHSISNNLDSNLHV 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKDFCQRLKEFSEKY 225
                  K  +         ++ I+LGGGI           +     +  + L    E  
Sbjct: 200 DVVKLYFKKAKAWSEKHQFPLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQEMG 259

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284
            V +  E G  IV +     T VLDI +       +                        
Sbjct: 260 DVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFEIYR 319

Query: 285 TGPYTA------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                              + G+ C   D+F        +  GD I F+    Y  +  +
Sbjct: 320 YKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSISH 379

Query: 333 W-FNGINMPTIAVKNVDGTIK 352
             F     P           +
Sbjct: 380 HDFLSHPHPEFIYLTQTKEDE 400


>gi|254453489|ref|ZP_05066926.1| lysine/ornithine decarboxylase, putative [Octadecabacter
           antarcticus 238]
 gi|198267895|gb|EDY92165.1| lysine/ornithine decarboxylase, putative [Octadecabacter
           antarcticus 238]
          Length = 404

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 51/362 (14%), Positives = 113/362 (31%), Gaps = 24/362 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D  ++              G  +  A+K   A  + + L +      ++S  E+ 
Sbjct: 46  PTLVMDVNRVEQQYYALKAGLG--GADIHYAVKANPAPEIIERLVKLGSHFDAASRGEIE 103

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK-LHKKIGLRI 122
           L           ++    K     A       +   +   + + +  AQ     ++ +R+
Sbjct: 104 LVLGAGASPSDVSFGNTIKRASDIAYAHAAG-VTLFSADAIEEIEKIAQHAPGAQVYIRL 162

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
               S + + L+        +     D+  +   +  GL FH   + +    +   L  +
Sbjct: 163 IVESSEADWPLSRKFGCDRDMAIDLLDRARALGLDPVGLSFHVGSQTRKASMWGPTLDEM 222

Query: 183 ---EKEFGHFITQIEWISLGGGIHFTDKD--YPVKDFCQRLKEFSEKYSV---QIYLEPG 234
                        +  +++GGG             D+   + +          ++  EPG
Sbjct: 223 VKIWDAAKEAGHALSLLNIGGGFPAFYGQDIEAPTDYAASVMDQVRSRFGEVARVMAEPG 282

Query: 235 EAIVTNTTTLNTTVLDISENI----KNLVIVDSSVEAHVPDY--LLYQESATIYPNTGPY 288
             +V     +   V+ +S          V +     + + +      +   T   +  P 
Sbjct: 283 RGLVAEAGAIVAEVMLVSRKSSRDLHRWVYLSIGRFSGLAETEGEAIRYQITTLRDDDPV 342

Query: 289 -TAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIA 343
              ++ G SC + D+  E         +K GDRI   +   Y  +  +  FNG     + 
Sbjct: 343 GPCVLAGPSCDSADVLYEKQPVLLPMTLKSGDRIVIRNCGAYTSSYSSVGFNGFPPLDVL 402

Query: 344 VK 345
           V 
Sbjct: 403 VI 404


>gi|89899511|ref|YP_521982.1| Orn/DAP/Arg decarboxylase 2 [Rhodoferax ferrireducens T118]
 gi|89344248|gb|ABD68451.1| Orn/DAP/Arg decarboxylase 2 [Rhodoferax ferrireducens T118]
          Length = 414

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 44/376 (11%), Positives = 101/376 (26%), Gaps = 34/376 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+Y  D+  L   +     +     VKL  A+K      +   +   +DG   +S  E
Sbjct: 40  QTPFYAYDRLLLRARVAALRGVLPRT-VKLHYAMKANPMPAVVGLMVGLVDGIDVASAGE 98

Query: 63  VMLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           + +           ++     +D E+   +++   I   +  ++   +    +L     +
Sbjct: 99  LKVALDAGANPLEISFAGPGKRDAELRQAVASRVLINLESFREVAALEAICGELGLSARV 158

Query: 121 RINPSVS-YSKFILADPNRPFSRLGEKCKDKIESEIK------NVNGLMFHNNCENKS-- 171
            +  +     K           + G   +   E          +  G       +N    
Sbjct: 159 AVRVNPDFELKGSGMKMGGGPKQFGVDVEQIPELLGCIGRAGLSFEGFHLFAGSQNLRSE 218

Query: 172 --FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                     +   +   H    + +++LGGG          +     + +   +   + 
Sbjct: 219 SICEAQQKSYELALRLAQHAPAPVRFLNLGGGFGIPYFPGEQRLDLAPIGDNLAQLVQRA 278

Query: 229 --------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-------- 272
                   + +E G  +V         ++D   +   + +V      H            
Sbjct: 279 QTELPDAALVIELGRYLVGEAGVYVARIVDRKVSRGQVYLVADGGLHHHLSASGNFGQVI 338

Query: 273 --LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                        +    T  V G  C   D+  E       ++ D +       Y  + 
Sbjct: 339 RKNYPVTIGNKADSRETETVSVVGPLCTPLDLLAERMALPVAQVDDLVVVFQSGAYGASA 398

Query: 331 KNW-FNGINMPTIAVK 345
               F G       + 
Sbjct: 399 SPQGFLGHPACLEVLV 414


>gi|1352223|sp|P14019|DCOR_CRIGR RecName: Full=Ornithine decarboxylase; Short=ODC
 gi|49440|emb|CAA34784.1| unnamed protein product [Cricetus cricetus]
          Length = 455

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 66/377 (17%), Positives = 119/377 (31%), Gaps = 46/377 (12%)

Query: 6   YYLIDK-QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           +Y+ D    L  +L     +     V    A+KC  +  + +TL         +S  E+ 
Sbjct: 39  FYVADLGDVLKKHLRWLKAL----PVTPFYAVKCNDSRALVNTLAA--ITVDCASKTEIQ 92

Query: 65  LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           L        E   Y    K       A  +    + F++  +L K   +A     K+ LR
Sbjct: 93  LVQGLGVPPERVIYANPCKQVSQIKYAASNGVQMMTFDSEIELMKVA-RAHPKVTKLVLR 151

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           I    S +   L+       R      ++ +    +V G+ FH          F   L +
Sbjct: 152 IATDDSKAVCRLSVKFGATLRTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQALSD 211

Query: 182 IEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLE 232
               F         +  + +GGG   ++      +           K F     V++  E
Sbjct: 212 ARCVFDMGTEVGFSMYLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPPDSGVRVIAE 271

Query: 233 PGEAIVTNTTTLNTTVL----------------------DISENIKNLVIVDSSVEAHVP 270
           PG   V +  TL   ++                       +++ +           AHV 
Sbjct: 272 PGRYYVASAFTLAVNIIAKKIVSKGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVK 331

Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
             L  +           Y++ + G +C   D   E      + +GD + FE++  Y +  
Sbjct: 332 PLLPKRPKPD----EKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAA 387

Query: 331 KNWFNGINMPTIAVKNV 347
            + FNG   P+I     
Sbjct: 388 ASTFNGFQRPSIYYVMS 404


>gi|70983858|ref|XP_747455.1| ornithine decarboxylase [Aspergillus fumigatus Af293]
 gi|66845081|gb|EAL85417.1| ornithine decarboxylase, putative [Aspergillus fumigatus Af293]
          Length = 433

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 48/363 (13%), Positives = 107/363 (29%), Gaps = 36/363 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+++ D  +++              V    A+KC     +   L     G   +S+ E+ 
Sbjct: 44  PFFVADLGQVIRQHRRWR--VNLPDVLPFYAVKCNPDPNLLRLLANLGTGFDCASIEELR 101

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                        +    K        +          +       +    + ++ LR+ 
Sbjct: 102 TVLSLGVDPCRIIFANPCKSVSSLVFAARTGVTRTTFDNLDELDNIRTFLPNAELVLRLY 161

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
            S S +   L +              +      +V G+ FH      +   +   +++ +
Sbjct: 162 ASDSDALINLGEKFGATVEASLPLLQRARELGLDVCGVSFHVGTGASNASAYVTAIRDAK 221

Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYL--EPGEAIV 238
             FG+       +  + +GGG   +     ++D    L+   ++    + L  EPG   V
Sbjct: 222 IVFGYGKSLGFDMNLLDIGGGFQDS----NLEDIACVLRPILKEEFPGVRLLAEPGRYYV 277

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSV-----------------EAHVPD------YLLY 275
            +  TL   VL    +          +                 +  V        +  +
Sbjct: 278 RSAYTLACKVLSRRRHSGTDHHDRPDMLYQNDGVYGNFMNVLIEKETVRPSLVAYTWPFH 337

Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFE-KPVKIGDRISFEDVAGYNINRKNWF 334
                       +   + G +C + D   +       ++IGD + ++++  Y I     F
Sbjct: 338 SRGNNTRRKLEEHRYTIWGPTCDSMDCVAKDVPMTSEIRIGDWLKYKNMGAYTIATATQF 397

Query: 335 NGI 337
           NG 
Sbjct: 398 NGF 400


>gi|229106622|ref|ZP_04236863.1| Decarboxylase [Bacillus cereus Rock3-28]
 gi|228676804|gb|EEL31409.1| Decarboxylase [Bacillus cereus Rock3-28]
          Length = 411

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 57/395 (14%), Positives = 110/395 (27%), Gaps = 43/395 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+ +  +L  +    +    +  + +  +LK      +   L         SS+ E
Sbjct: 12  GSPLYVYNLAELTKSYQKLINSLPDKSI-IYYSLKANPNPEITRHLINLGCYAEISSIGE 70

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +    +     E   Y    K  +        N       + ++L    D  +   K I 
Sbjct: 71  LDTVLDVGGSPEHCLYTGPGKTKKEIQYALSKNVSHFSVESFNELEIINDLTKNHSKLIN 130

Query: 120 LRINPSVSYS-KFILADPNRPFSRLGEK--------CKDKIESEIKNVNGLMFHNNCENK 170
           + +  + S++            S+ G           K    ++   +NG   +N     
Sbjct: 131 ITLRINPSFNVGNASIKMTGIPSQFGFDEECLNSDIIKLFKGNKNLKINGFHIYNGSNFN 190

Query: 171 SFLCFSAML----KNIEKEFGHFITQIEWISLGGGIH---------FTDKDYPVKDFCQR 217
           +            + I          IE++  GGG              K+         
Sbjct: 191 NIDILVENYTNILETILNLKNKLSIDIEFVDFGGGFAAPFGKDLDLPDYKELKDSLEALL 250

Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
            K F + +   I  E G  +      L  TV  + E+      +      H+      + 
Sbjct: 251 NKHFKDNHRPTIAFESGRYLTATCGCLIGTVQSVKESKGRKYCIVDFGINHLGGMSGLRR 310

Query: 278 SATIY-----------PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
             TI             N    T  + G  C   D   +      ++ GD +   +V  Y
Sbjct: 311 IPTIELNILKLNISVEDNAKVETVTIVGPLCTPLDYLAKNVSVSKLQPGDVVFVPNVGAY 370

Query: 327 NINRK-NWFNGINMPTIAVKNV-----DGTIKAIR 355
            +      F    +P   +          T+K +R
Sbjct: 371 GLTASLIAFLSREIPKEIIIKNQSVICSHTLKIVR 405


>gi|255730323|ref|XP_002550086.1| ornithine decarboxylase [Candida tropicalis MYA-3404]
 gi|240132043|gb|EER31601.1| ornithine decarboxylase [Candida tropicalis MYA-3404]
          Length = 462

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 62/367 (16%), Positives = 121/367 (32%), Gaps = 37/367 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++  +++          V+   A+KC +   +  TL         +S  E+ L
Sbjct: 84  FFICDLGEIKKSVEIWNKSL--PSVQPHYAVKCNSNLKVLQTLYSLGVNFDCASKQEIDL 141

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   +   Y    K        ++ D  +    +    +K        KI +R+  
Sbjct: 142 ILSMAIQPDKIIYANPCKTNSFIRHANSQDVNLTTVDNVHELYKISKFHPGCKILIRLIT 201

Query: 125 SVSYSKFILADPNRPFSRLGE-KCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
             S ++  L+        +   +     +    NV+G+ FH     K F      +K+ +
Sbjct: 202 DDSTAQCQLSTKFGCDLSIAINEILPIAKELGLNVHGVAFHVGSGAKDFTSIYQAIKDSK 261

Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS-----EKYSVQIYLEPGE 235
             F          + + +GGG      +   K     L+++        + ++   EPG 
Sbjct: 262 TLFEKMFEFGFTPQLLDIGGGFERGTFNESSKMVNFALEKYFPLEYTTNHGIKFIAEPGR 321

Query: 236 AIVTNTTTLNTTVL----------DISENIKNLVIVDSSVEAHVPDY------------- 272
            +V N  TL T V+          D+   +     V  ++   + D+             
Sbjct: 322 FMVANAFTLITHVIARRDLAENENDVKAMLYINDGVYGNLNCILFDHQNPKVYVLTNKNQ 381

Query: 273 -LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINR 330
               QE      N   +   V G +C   D    F      +++GD + FE+V  Y    
Sbjct: 382 LYYKQELLEKSQNQKGFNYSVWGPTCDGLDCVSSFVQLSKNIEVGDWLFFENVGAYTSCA 441

Query: 331 KNWFNGI 337
              FNG+
Sbjct: 442 STRFNGL 448


>gi|159123567|gb|EDP48686.1| ornithine decarboxylase, putative [Aspergillus fumigatus A1163]
          Length = 433

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 48/363 (13%), Positives = 107/363 (29%), Gaps = 36/363 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+++ D  +++              V    A+KC     +   L     G   +S+ E+ 
Sbjct: 44  PFFVADLGQVIRQHRRWR--VNLPDVLPFYAVKCNPDPNLLRLLANLGTGFDCASIEELR 101

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                        +    K        +          +       +    + ++ LR+ 
Sbjct: 102 TVLSLGVDPCRIIFANPCKSVSSLVFAARTGVTRTTFDNLDELDNIRTFLPNAELVLRLY 161

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
            S S +   L +              +      +V G+ FH      +   +   +++ +
Sbjct: 162 ASDSDALINLGEKFGATVEASLPLLQRARELGLDVCGVSFHVGTGASNASAYVTAIRDAK 221

Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYL--EPGEAIV 238
             FG+       +  + +GGG   +     ++D    L+   ++    + L  EPG   V
Sbjct: 222 IVFGYGKSLGFDMNLLDIGGGFQDS----NLEDIACVLRPILKEEFPGVRLLAEPGRYYV 277

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSV-----------------EAHVPD------YLLY 275
            +  TL   VL    +          +                 +  V        +  +
Sbjct: 278 RSAYTLACKVLSRRRHSGTDHHDRPDMLYQNDGVYGNFMNVLIEKETVRPSLVAYTWPFH 337

Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFE-KPVKIGDRISFEDVAGYNINRKNWF 334
                       +   + G +C + D   +       ++IGD + ++++  Y I     F
Sbjct: 338 SRGNDTRRKLEEHRYTIWGPTCDSMDCVAKDVPMTSEIRIGDWLKYKNMGAYTIATATQF 397

Query: 335 NGI 337
           NG 
Sbjct: 398 NGF 400


>gi|288941528|ref|YP_003443768.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Allochromatium vinosum DSM 180]
 gi|288896900|gb|ADC62736.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Allochromatium vinosum DSM 180]
          Length = 410

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 45/376 (11%), Positives = 104/376 (27%), Gaps = 35/376 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+Y  D+  +   +        +  + L  A+K      +   L   +DG   +S  E+
Sbjct: 36  TPFYAYDRALISARVAQLRQALPD-DIHLHYAIKANPMPAVVQHLAGLVDGFDVASGGEL 94

Query: 64  MLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
               +        ++   A    E+   ++    I   +  +L       + L  +  + 
Sbjct: 95  KTALDTSMPPHQISFAGPAKTPGELRQAIAAGIVINLESERELRAAVQAGEALGIRPRVA 154

Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCKD----KIESEIKNVNGLMFHNNCENKSFLCFS 176
           +  +     K      +    + G   +       E +  ++  + FH     ++    +
Sbjct: 155 VRVNPDFELKSAGMKMSGGPKQFGIDAERVPAVLAEMKCLDLEFIGFHIFSGAQNLRAEA 214

Query: 177 AMLKNIEKEFGHFITQIEWI------SLGGGIHFTDKDYPVKDFCQRLKEFSEKY----- 225
                 +         ++        +LGGG                + E   +      
Sbjct: 215 ISEAQEKTLELAMRLALDVPSPVRALNLGGGFGIPYFPGEPPLDLVAVGERLSELLPAAR 274

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-----------VP 270
                 ++ +E G   V         V++   +   + +V      H           + 
Sbjct: 275 RALPDTELIIELGRFFVGEAGVYVCRVVERKVSRGQVFLVTDGGLHHHLAASGNFGQVIR 334

Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                  +  +  +  P TA V G  C   D+  +       + GD ++      Y +  
Sbjct: 335 KNYPVLVANRVESDGDPETASVVGPLCTPLDLLADRMPLGHAREGDLVAVMQSGAYGLTA 394

Query: 331 KNW-FNGINMPTIAVK 345
               F G       + 
Sbjct: 395 SPTAFLGHPTAVEVLV 410


>gi|262052059|ref|ZP_06024269.1| hypothetical protein SA930_0163 [Staphylococcus aureus 930918-3]
 gi|259160037|gb|EEW45071.1| hypothetical protein SA930_0163 [Staphylococcus aureus 930918-3]
          Length = 400

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 54/381 (14%), Positives = 106/381 (27%), Gaps = 36/381 (9%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66
           Y+ D   L ++L         +  ++  A+K  +   + DT++QY++G   +S  E+  G
Sbjct: 21  YIYDLVGLEHHLQHITSSLP-SNCQIYYAMKANSERKILDTISQYVEGFEVASQGEIAKG 79

Query: 67  HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                     +       +    AV      I   ++ +L +     +   K   + +  
Sbjct: 80  LAFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRV 139

Query: 125 S-VSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE----NKSF 172
           +                ++ G          +  +     +++G  FH+       N   
Sbjct: 140 NLAGPFPNATLHMAGRPTQFGISEDEVDDVIEAALAMPKIHLDGFHFHSISNNLDSNLHV 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKDFCQRLKEFSEKY 225
                  K  +         ++ I+LGGGI           +     +  + L    E  
Sbjct: 200 DVVKLYFKKAKAWSEKHRFPLKHINLGGGIGVNYADLTNQFEWDNFVERFKTLIVEQEME 259

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284
            V +  E G  IV +     T VLDI +       +                        
Sbjct: 260 DVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFDIYR 319

Query: 285 TGPYTA------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                              + G+ C   D+F        +  GD I F+    Y  +  +
Sbjct: 320 YKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSISH 379

Query: 333 W-FNGINMPTIAVKNVDGTIK 352
             F     P           +
Sbjct: 380 HDFLSHPHPEFIYLTQTKEDE 400


>gi|163794512|ref|ZP_02188483.1| Orn/DAP/Arg decarboxylase 2 [alpha proteobacterium BAL199]
 gi|159180236|gb|EDP64759.1| Orn/DAP/Arg decarboxylase 2 [alpha proteobacterium BAL199]
          Length = 417

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 47/358 (13%), Positives = 98/358 (27%), Gaps = 29/358 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P   +D   +  N  +           +  A+K      + D L         +S  E+ 
Sbjct: 58  PLLAVDLSVVEWNYRSL--AFALPETAIYYAVKANPEPELVDLLAALGSRFDVASRGEIE 115

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           L        +  ++    K     A            +  +++ K    A        + 
Sbjct: 116 LCLSRGISADRLSFGNTIKKERDIAFAHAEGVRMFAVDCEAEVEKVARAAPGADVFCRIL 175

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
            + + +     L+          E    +         G+ FH   +      +   L  
Sbjct: 176 TSGTGAEW--PLSRKFGCTLAKAETVLRRAADLGLTPRGVSFHVGSQQIDLSQWDIALAE 233

Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLE 232
               F         ++ I+LGGG     ++               L       ++    E
Sbjct: 234 TAHLFERMEDQGITLDLINLGGGFPARYREDVAGAEAYGRAIYAALDRHFAGRAINTIAE 293

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPN 284
           PG  +V +   +   V+ +S    +             S +   + + + Y+ +      
Sbjct: 294 PGRGLVGDAGVIRAEVVLVSRKDDSEDTRWVYLDIGKFSGLAETMDEAIKYRVTTDH-DG 352

Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338
                 ++ G SC + DI  E   +     + +GD +       Y     +  FNG  
Sbjct: 353 GPDGPVILAGPSCDSADILYEKAGYRLPLDLAVGDTVLILATGAYTSTYSSIGFNGFP 410


>gi|119773550|ref|YP_926290.1| ornithine decarboxylase [Shewanella amazonensis SB2B]
 gi|119766050|gb|ABL98620.1| ornithine decarboxylase [Shewanella amazonensis SB2B]
          Length = 391

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 54/358 (15%), Positives = 119/358 (33%), Gaps = 26/358 (7%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+ +ID   +    D  +     A   +  A+K   A  +   L         +S+YE+
Sbjct: 30  TPFVVIDTNIIAKQYDDMVTNFPFAN--VYYAVKANPAKEILTLLKDKGSNFDIASIYEL 87

Query: 64  MLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            +        +  ++      +                ++ + L    ++A      + +
Sbjct: 88  DMVMAVGVTADRVSFGNTIKKRKDVRAFYERGVRLFASDSEADLRMIAEEAPGSKVYVRI 147

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
               S +   + L+      + +  +     +    +  G+ FH   + +    + A + 
Sbjct: 148 LTEGSQTA-DWPLSRKFGCQNEMAYELLALAKELGLDPYGISFHVGSQQRDIGAWDAAIG 206

Query: 181 NIEKEF----GHFITQIEWISLGGGIHFTDKDYPVK--DFCQRLKEFSEKYS----VQIY 230
            ++  F          ++ I++GGG      D   +   + Q++K F ++       +I 
Sbjct: 207 KVKVLFDRLREDHGIVLKMINMGGGFPANYIDKTNQLGVYAQQIKHFLKEDFGDELPEII 266

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATIYPNT 285
           LEPG ++++N   L + V+ IS          +          +       +        
Sbjct: 267 LEPGRSLISNAGVLISEVVLISRKSHTALERWVYTDVGKFSGLIETMDEAIKYPIFTEKK 326

Query: 286 GP-YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338
           G     ++ G +C + DI  E   +     + IGDR+ +     Y        FNG  
Sbjct: 327 GELDKCVIAGPTCDSADIMYEHYAYGLPADLAIGDRLYWLTAGAYTTTYSAVCFNGFP 384


>gi|225445352|ref|XP_002281621.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 412

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 50/362 (13%), Positives = 111/362 (30%), Gaps = 29/362 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y++D   ++  +D          V    A+KC     +   L         +S  E+ 
Sbjct: 45  PFYILDLGAVVRLMDMWKQAL--PNVVPYYAVKCNCQPPLITALASLGANFDCASRAEIE 102

Query: 65  LGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                  G +   Y      +     A     +   F+++ +++K     +K    + ++
Sbjct: 103 TVMALGVGAQQIVYANPCKGESHLKYAASVGVNLTTFDSMQEIDKIIMWHKKCDLLLRIK 162

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
                  S   L                   +    V G+ FH   +      +   + +
Sbjct: 163 APNDEKGSWRSLGSKFGALREEVVPLLQHANAAGLRVIGVSFHVGSKVNDPQVYRGAIAS 222

Query: 182 IEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV--------QI 229
               F       +  +  + +GGG     +     +    +KE    Y          +I
Sbjct: 223 ARGVFDAAAQLKLPPMHVLDIGGGF---QESPTFHEIAAVIKEAINDYFPSSETSEDLKI 279

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI-------- 281
             EPG        TL + ++      +              +   Y +S+ +        
Sbjct: 280 MAEPGRFFAETAFTLVSNIIGKRVRGEKREYWIDDGIYGSFNLPAYDKSSMMVKPLLGGS 339

Query: 282 -YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
            + N   +++ V G +C + D+         + + D + F ++  Y  +    FNG ++ 
Sbjct: 340 EWMNKAKFSSTVFGPTCDSMDMVVAESQLPELHMNDVLVFYNMGAYTASAGTRFNGFDIS 399

Query: 341 TI 342
           +I
Sbjct: 400 SI 401


>gi|23014264|ref|ZP_00054090.1| COG0019: Diaminopimelate decarboxylase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 460

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 54/393 (13%), Positives = 120/393 (30%), Gaps = 34/393 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLL--LALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P ++  +++L  N+       +     ++   + K      +   L+Q        S 
Sbjct: 52  GSPLFIASERRLRENVRRVRGAFERHYRPVVHGWSYKTNYTSAICRILHQEGSWAEVVSA 111

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKI 118
           +E          G    +N   K   I          +  + + +L   +  A++  + +
Sbjct: 112 FEYEKARSLGVPGNRIIFNGPNKPRAILERAIAEGARLHVDHLDELELIERIAREKGEVV 171

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK---CKDKIESEIKNVNGLMFHNNCENKSFLCF 175
            + +  + +                G+          S    + GL  H          +
Sbjct: 172 PVTLRLNFNTGYTDPWSRFGFNLESGQAHSAASRIKRSAHLRLTGLHSHIGTFILETRAY 231

Query: 176 SAMLKNIEKEFGHFITQ----IEWISLGGGIH-----------FTDKDYPVKDFCQRLKE 220
           +  ++ +              I+ I +GGG+                   V+++   +  
Sbjct: 232 AEQVRLMCNFMKTVEADGECVIDAIDIGGGLPSRNALQGIYLPPEQAVPAVEEYGAAVCS 291

Query: 221 FSEKY-------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDY 272
             E+           +++E G A+V +  +L +TV+                  + +   
Sbjct: 292 ALEECLADRVGPHPTLFIESGRAVVDDAVSLASTVVGTKRLPDGRAAAVLDAGINSMLTA 351

Query: 273 LLYQESATIYPNTGPYTAM--VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
           L Y     +       +A   + G  C+  D+        P+ +GD + F  V  YN  +
Sbjct: 352 LWYHHPVKLTKPKAGDSADTVLYGPMCMNIDVMRHTVQLPPLSVGDCLVFNPVGAYNNTQ 411

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIRE-FSYNDY 362
              F     P + + + DG    IRE  +  D 
Sbjct: 412 WLQFIEY-RPAVVLIHSDGEHSVIREAETIEDM 443


>gi|126323015|ref|XP_001364917.1| PREDICTED: similar to ornithine decarboxylase [Monodelphis
           domestica]
          Length = 461

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 62/386 (16%), Positives = 113/386 (29%), Gaps = 33/386 (8%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67
           + D   +L       + +         A+KC     +  TL     G    S  E+ L  
Sbjct: 42  VADLGDILK--KHLRWYKALPQATPFYAVKCNDNRAILKTLAAVGAGFDWVSKTEMQLVQ 99

Query: 68  E-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSV 126
                 E   Y    K         N    +    S++   K        K+ LR+    
Sbjct: 100 NLGVPPEMTIYANPCKQVSQIKYAVNSGVQMMTFDSEVELMKVARAHPKAKLVLRMATDD 159

Query: 127 SYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF 186
           S +   L+       +      ++ +    +V G+ FH          F   + +    F
Sbjct: 160 SKAVCRLSVKFGVTLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQAVFDARCVF 219

Query: 187 ---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRL------KEFSEKYSVQIYLEPGEAI 237
                F   +  + +GGG   ++      +    +      K F     VQI  EP    
Sbjct: 220 DMGAEFGFNMYLLDIGGGFPGSEDVKLKFEEISTVINPALDKYFPPDSGVQIIAEPCRYY 279

Query: 238 VTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY---------------QESATIY 282
           V +  TL   ++     +K     D   EA+   ++ Y                      
Sbjct: 280 VASAFTLAVNIIAKKVVLKEQTGSDDEDEANDQTFMYYVNDGVYGSFNCILFDHAHVKPL 339

Query: 283 PNTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
               P        +   G +C   D   +      + +GD + FE++  Y +   + FNG
Sbjct: 340 LQKRPKPDEKYYSSSTWGPTCDGLDRIVKCCDLPEMHVGDWMLFENMGAYTVAAASTFNG 399

Query: 337 INMPTIAVKNVDGTIKAIREFSYNDY 362
               TI         + +++    D+
Sbjct: 400 FQRSTIYYVISGPAWQCMQQIKNQDF 425


>gi|326503090|dbj|BAJ99170.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 408

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 50/352 (14%), Positives = 103/352 (29%), Gaps = 19/352 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +++ +Y+ D  ++++            GV+   A+KC     +   L     G   +S  
Sbjct: 47  VRSAFYVFDLARVVDLYRGWRRAL--PGVRSCYAVKCNPEPALLGALAALGAGFDCASRR 104

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           E+           +  Y    K        +    +   T     +     +       +
Sbjct: 105 EMEAVLALGVQPGSIVYANPCKPEAHLEYAAEVG-VNLATYDSEEEVVKVKRCHPGCELI 163

Query: 121 RIN--PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
                P    ++  L                  + E  NV G+ FH      +   +   
Sbjct: 164 LRIKGPDGGEARVDLGTKYGAHEDEVLPLLRAAQREGLNVAGVSFHVGSGASNTDVYRGA 223

Query: 179 LKNIEKEFGHF----ITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232
           ++     F       +  +  + +GGG        +          + F E   V++  E
Sbjct: 224 IEAARGVFDTAAALGMPPMRVLDIGGGFMAGPAFDEAAAVINAALERYFGELPCVEVIGE 283

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGP 287
           PG        T+   V+      +            ++     D+ + +      P  G 
Sbjct: 284 PGRYFAETAFTMAARVIGKRTRGEVREYWIDDGLYGTLSCIPMDHYVPRPRPLAAPRAGE 343

Query: 288 YTAM--VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
            T    V G +C + D     +    + +GD + F+D+  Y     + FNG 
Sbjct: 344 KTYTSTVFGPTCDSLDTVVTGYQLPEMSVGDWLVFDDMGAYTTASGSNFNGF 395


>gi|242050042|ref|XP_002462765.1| hypothetical protein SORBIDRAFT_02g031570 [Sorghum bicolor]
 gi|241926142|gb|EER99286.1| hypothetical protein SORBIDRAFT_02g031570 [Sorghum bicolor]
          Length = 413

 Score =  146 bits (367), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 49/348 (14%), Positives = 95/348 (27%), Gaps = 19/348 (5%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y++D  K+++              +   A+KC     +   L     G   +S  E+  
Sbjct: 56  FYVLDLAKVVDLFRAWRRAL--PDARPCYAVKCNPDPALLGALAALGAGFDCASRAEIEA 113

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       Y    K        +    +   T     +     +       L    
Sbjct: 114 VLALGVQPRDIVYANPCKPEAHLEYAAEVG-VNLTTYDSEEEVAKVRRCHPACELLLRLK 172

Query: 125 SVSYSKFILADPNRPFSRLGE--KCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
                   +    +  +   E        +     V G+ FH          +S  ++  
Sbjct: 173 GPDGGGVRVDLGTKYGAHADEVVPLLRAAQRAGVGVAGVSFHVGSGASILAVYSGAIQAA 232

Query: 183 EKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFC--QRLKEFSEKYSVQIYLEPGEA 236
              F       +  +  + +GGG                   + F +   V++  EPG  
Sbjct: 233 RAAFDAAAALGMPPMRVLDIGGGFVSGPTFDDAAAVINDALAQHFGDLPCVEVIGEPGRY 292

Query: 237 IVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGPYTAM 291
                 TL   V+      +            S+   + D+ +        P  G  T  
Sbjct: 293 FAETAFTLAARVIGKRTRGEVREYWIDDGLYGSLNCVIMDHYVPTPRPLASPRPGDKTYT 352

Query: 292 --VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
             V G +C + D     +    + +GD + F+D+  Y     + FNG 
Sbjct: 353 STVFGPTCDSFDTVVTGYQLPEMSVGDWLVFDDMGAYTTGAGSNFNGY 400


>gi|41386599|dbj|BAD08372.1| decarboxylase [Streptomyces halstedii]
          Length = 414

 Score =  146 bits (367), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 61/391 (15%), Positives = 111/391 (28%), Gaps = 45/391 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG----TTSS 58
            TP Y+ D  ++            +  V++  ALK      +   L    +G       S
Sbjct: 12  GTPLYVYDLDRVAEARHDLRTSLPDE-VEIYYALKANPHPQVAGALRS-GEGRECRAEIS 69

Query: 59  SLYEVMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKA--QK 113
           S+ E+       F      Y    K      +A+     T    +++ L      A    
Sbjct: 70  SVGELAAALTAGFRASEILYTGPGKTDGELDEAIGKGVKTFCVESLTDLQHVGAVALRHG 129

Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFS------RLGEKCKDKIESEIKNVNGLMFHNNC 167
           +     LRIN + + +   +     P         L +   +        + GL F    
Sbjct: 130 VVADCLLRINSATASATTSIRMTGTPSQFGIDSETLVDAMPELRAVPGTRITGLHFFPLS 189

Query: 168 ENKS----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--------DYPVKDFC 215
             +        F   +             +E++ +GGG                   +  
Sbjct: 190 NARDEASLIGEFRHTIAYAAGLAEETGLTLEFLDIGGGFAHPYGAPGERPVYRELRTELA 249

Query: 216 QRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENI----------KNLVIVD 262
             L E    +     +I +E G    +   TL T V++I  +            N     
Sbjct: 250 AALDEHFPHWREGAPRIAVETGRYQTSGAGTLLTRVVNIKVSRGRKFVVIDAGINTFGGM 309

Query: 263 SSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFED 322
           S +   +P  +  + + +         A + G  C  GDI G       +  GD ++  +
Sbjct: 310 SGLGRLLPVAVEPEYTGSAEATELTDVASLAGPLCTPGDILGREIRLPELAPGDLVTIPN 369

Query: 323 VAGYNINRKN--WFNGINMPTIAVKNVDGTI 351
              Y     +   F G   P   V      +
Sbjct: 370 AGAYG-VTASLLMFLGRPAPVEVVLKGGKVV 399


>gi|254561232|ref|YP_003068327.1| ornithine/diaminopimelate PLP-dependent decarboxylase
           [Methylobacterium extorquens DM4]
 gi|254268510|emb|CAX24467.1| putative ornithine/diaminopimelate PLP-dependent decarboxylase
           [Methylobacterium extorquens DM4]
          Length = 388

 Score =  146 bits (367), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 47/371 (12%), Positives = 115/371 (30%), Gaps = 34/371 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   + +N             ++  A+K   A  +   L +      ++S+ E+ 
Sbjct: 21  PVMVLDLDVVRDNYTAFARAL--PDTRVFYAVKANPAAEVLRLLAEMGSCFDTASVAEIE 78

Query: 65  LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG-- 119
           +        +  ++      +   + A+         +  +++ K    ++      G  
Sbjct: 79  MALAAGATADRVSFGNTIKKERDIVRALKLGIRLFAVDCQAEVEKIVRASEAAGIAAGEV 138

Query: 120 ---LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
               RI    + + + L+        +     +       +  G+ FH   +  +   + 
Sbjct: 139 QVFCRILCDGAGADWPLSRKFGCEPEMAVNVLEHAHRHGLHAYGVSFHVGSQQANTEAWD 198

Query: 177 AMLKNIEKEFGHF---ITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSV 227
             L +  + F         +  ++LGGG            +       + L +       
Sbjct: 199 GALASASEIFRECALRGIGLSMVNLGGGFPTKYLKQVPGVETYGDAIFRALTKHFGNRIP 258

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENI---------KNLVIVDSSVEAHVPDYLLYQES 278
           +  +EPG  +V N   +   V+ +S+              +     +   + + + Y   
Sbjct: 259 ETIIEPGRGMVGNAGLIEAEVVLVSKKSEAEDEVRWVYLDIGKFGGLAETMDESIRYAIR 318

Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-F 334
                +      +V G +C + D+  E   +     + IGD++  E    Y        F
Sbjct: 319 TDHDEDRMA-PCVVAGPTCDSVDVLYEKNHYPLPVSLSIGDKVWIEGAGAYTTTYAAVAF 377

Query: 335 NGI-NMPTIAV 344
           NG   +  I +
Sbjct: 378 NGFPPLAQIVI 388


>gi|54025755|ref|YP_119997.1| putative ornithine decarboxylase [Nocardia farcinica IFM 10152]
 gi|54017263|dbj|BAD58633.1| putative ornithine decarboxylase [Nocardia farcinica IFM 10152]
          Length = 371

 Score =  145 bits (366), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 57/363 (15%), Positives = 110/363 (30%), Gaps = 29/363 (7%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYI---RKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTS 57
           M ++PY +I  +++ +N          R   G ++  A+K      +   L+        
Sbjct: 1   MPESPYLVIHPERVRDNYRALAAAVSGRGLRGTRIRYAVKASPVPELIRLLDTEGAEFDV 60

Query: 58  SSLYEVMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114
           +S+ E+ L            Y            A         F+T   L +  + A   
Sbjct: 61  ASIGEIDLCRAQGVAPHKLCYGNTVKKAADIARAHAVGVRRFAFDTEDDLLRIAEHAPGA 120

Query: 115 HKKIGLRINPSVS--YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF 172
             +     +   S            +  +RL  + +D        V G  FH   +    
Sbjct: 121 QVECRFLASAPQSRTPFGTKFGCAPQEAARLLVRARDL----GLEVAGPYFHVGSQQLDP 176

Query: 173 LCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
             +   ++   +I          +  +++GGG+     D                     
Sbjct: 177 DAWRIGIEQAGHIANALSDKEIPVTSVNIGGGLPIAYADAAPALDRIAAVIEEAAARHLP 236

Query: 230 -----YLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDY-LLYQESATI 281
                 +EPG A+V N  T++  V+ +      +  V +D      + +    Y     +
Sbjct: 237 PTATLVVEPGRALVGNAGTIHAEVVAVRIAPDGRRWVYLDIGRYNGMAETENEYIAYRFV 296

Query: 282 YPNTGP--YTAMVCGRSCLAGDIFG---EFHFEKPVKIGDRISFEDVAGYNINRKN-WFN 335
               G     A+V G +C   D+            ++ GDR+   D   Y  +  +  FN
Sbjct: 297 TERDGDPVDEAVVAGPTCDGDDVLYQRTRVLLPTTLRAGDRVQILDTGAYTASYSSVSFN 356

Query: 336 GIN 338
           G  
Sbjct: 357 GFP 359


>gi|195121526|ref|XP_002005271.1| GI20395 [Drosophila mojavensis]
 gi|193910339|gb|EDW09206.1| GI20395 [Drosophila mojavensis]
          Length = 392

 Score =  145 bits (366), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 51/357 (14%), Positives = 111/357 (31%), Gaps = 23/357 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
             + D   +    +      +   +    A+KC     +  TL     G   +S  E+  
Sbjct: 31  LNICDLSTVERKFELWQK--QLPRITPFYAVKCNDDKRIVQTLADLGVGFDCASKNELKQ 88

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             +     +   +    +             +     ++   +K      +  + +R   
Sbjct: 89  VLDYGVSPDRIIFANPCRPISHLDYAKQQKVLKGTVDNEFEIYKLHKHYPNSNLIVRFKS 148

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKI-ESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
               ++  L D     + +       + +S    V G  FH          +   ++  +
Sbjct: 149 EAKAAQCPLGDKFGCDADIDASALMLLAKSLDLTVTGTSFHVGSGCSDMEAYERAIRKAK 208

Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEKYSVQIYLEPGEAI 237
             F         ++ + +GGG   +D ++ +K        ++++     +QI  EPG   
Sbjct: 209 NLFKFGQLLGYDLDLLDIGGGFPGSDDEHFIKLAGTVNSAVQKYFPDERIQIIAEPGRFF 268

Query: 238 VTNTTTLNTTVLDISE-----------NIKNLVIVDSSVEAHVPDYLLYQESATIYPNT- 285
           V  + TL   +    E                  V  S    + D+        +  +  
Sbjct: 269 VAASYTLVCKIHAKREVRNSAGKLDTVMYYLNDGVYGSFNCILYDHQTVTVEHYLPADPL 328

Query: 286 -GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
              + +++ G SC A D   E      +K GD + F ++  Y +   + FNG  +P 
Sbjct: 329 LPTFKSLIWGPSCDALDKISEDLRLPYLKRGDLLGFPNMGAYTVPIASAFNGFPLPK 385


>gi|146343068|ref|YP_001208116.1| putative ornithine decarboxylase [Bradyrhizobium sp. ORS278]
 gi|146195874|emb|CAL79901.1| putative ornithine decarboxylase [Bradyrhizobium sp. ORS278]
          Length = 380

 Score =  145 bits (366), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 48/357 (13%), Positives = 111/357 (31%), Gaps = 27/357 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   + +N             ++  A+K   A  +   L        ++++ E+ 
Sbjct: 21  PCLVVDLDIVRDNYMNFARAL--PDSRVFYAVKANPAPEVLSLLASLGSSFDTATVAEIE 78

Query: 65  LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +        +  +Y      +     A          +  +++ K    A        + 
Sbjct: 79  MALAAGATPDRISYGNTIKKERDIARAYALGIRLFAVDCAAEVEKISRAAPGAKVFCRIL 138

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
                + +++ L+        +  +  D  +       G+ FH   + +    +   L  
Sbjct: 139 --YDCAGAEWPLSRKFGCDPEMAVEVLDLAKRLGLEPCGISFHVGSQQRKVKAWDRALAM 196

Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIYLE 232
               F         +  +++GGG                +   + L++       +  +E
Sbjct: 197 ASTVFRDCAERGINLSMVNMGGGFPTKYLKDVPPVVQYGRSIFRALRKHFGNQIPETIIE 256

Query: 233 PGEAIVTNTTTLNTTVLDISENI-----KNLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287
           PG  +V N   + + V+ IS+       + + +                  A   P+ G 
Sbjct: 257 PGRGMVGNAGIIESEVVLISKKSDEDELRWVYLDIGKFGGLAETMDESIRYAIRTPHEGA 316

Query: 288 YT--AMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338
            T   ++ G +C + D+  E   +     + IGD++  E    Y     +  FNGI 
Sbjct: 317 ETTPCVLAGPTCDSADVMYEKLPYPLPVTLSIGDKVLIEGTGAYTSTYSSVAFNGIP 373


>gi|307213748|gb|EFN89086.1| Ornithine decarboxylase [Harpegnathos saltator]
          Length = 409

 Score =  145 bits (366), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 53/374 (14%), Positives = 128/374 (34%), Gaps = 24/374 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   ++       +I K   V    A+KC +   +   L         +S+ E+  
Sbjct: 33  FYVADIGGVIK--KHMEWINKIPRVTPYYAIKCNSDPTVIKVLAAMNVCFDCASMQEIRQ 90

Query: 66  GHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
             +    GE   +            A     + +  +  ++L+K ++   +    + +R 
Sbjct: 91  VMQHGVKGERIIFAHPAKLPSHIKYARKVGVERMTVDGETELSKIQEFFPEAKVVLRIRC 150

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           +   S           P+         + +    N++G  FH     +    +   +K  
Sbjct: 151 DAKNSPVSLGTKFGCEPYEE-AVHLIQRTKDLGLNLHGFSFHVGTPCREVDAYRRGIKTC 209

Query: 183 EKEFGHFI----TQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV--QIYLEPGEA 236
            +            +E I +GGG         +  F + + + ++      +I  EPG  
Sbjct: 210 ARLIDVAKTIGCRDVELIDIGGGFSGDCGAE-IDRFAKVINDATQDLDPAVRIISEPGRY 268

Query: 237 IVTNTTTLNTT------VLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT----G 286
            V+   TL +       V +  E  +   +      + + + L  Q              
Sbjct: 269 YVSANFTLASYLHSKRIVSENGELKRMYYMNCGVYNSFLDELLGLQSRRPRLLFEPINDE 328

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA-VK 345
            +++++ G +  + D+  +      + +GD + ++D+  Y ++  N FNG  +P +    
Sbjct: 329 EFSSILWGPTADSYDLIVKDVPLPELYVGDWLVWKDMGAYTLSLSNTFNGFPIPAVMPFV 388

Query: 346 NVDGTIKAIREFSY 359
                + +++  S+
Sbjct: 389 RKSQWLVSVKMESF 402


>gi|21229287|ref|NP_635209.1| ornithine decarboxylase [Methanosarcina mazei Go1]
 gi|20907866|gb|AAM32881.1| Ornithine decarboxylase [Methanosarcina mazei Go1]
          Length = 390

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 54/360 (15%), Positives = 125/360 (34%), Gaps = 30/360 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+ ++D QK+  + D  +        K+  A+K      +   L +       +++YE
Sbjct: 30  ETPFLIVDLQKIERSYDELVEHM--PFAKIHYAVKANPLDKVVLALKRKGSNFDVATIYE 87

Query: 63  V-MLGHEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +  L       E  +Y    K  +  A          + ++ S L K   +A        
Sbjct: 88  LDQLIRLGVEPERISYGNTIKKEKDIAYAYDNGVRLFVTDSESDLKKLARRAPGSRVFFR 147

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177
           +      +         + P        K  +++E   +   GL FH   + +    +  
Sbjct: 148 ILTESDGADWPLSRKFGSHPDLIY----KLILKAEKLGLEPYGLSFHVGSQQRDIGQWDN 203

Query: 178 MLKNIEKEF---GHFITQIEWISLGGGIHFTDKD--YPVKDFCQRLKEFSEKYS----VQ 228
            +   +  F         ++ I+LGGG     +   + ++ +   ++ F  +       +
Sbjct: 204 AIAKCKYLFEAVAEKGIHLKMINLGGGFPAKYQSQAHDLETYAHEIRRFLHEDFGEELPE 263

Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE-----AHVPDYLLYQESATIYP 283
           I +EPG ++V +   + + V+ I++  +        ++       +       +      
Sbjct: 264 ILIEPGRSLVADAGIIVSEVIMIAKKARFNQYKWVYLDIGKFGGLIETLDECIKYPIFCD 323

Query: 284 NTG-PYTAMVCGRSCLAGDIFG---EFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338
             G     ++ G +C + DI     ++ F   ++ G+R+       Y  +  +  FNG  
Sbjct: 324 KKGCAEEVILAGPTCDSMDILYEHHKYSFPHTMRDGNRVYIFTTGAYTQSYSSICFNGFP 383


>gi|93006103|ref|YP_580540.1| Orn/DAP/Arg decarboxylase 2 [Psychrobacter cryohalolentis K5]
 gi|92393781|gb|ABE75056.1| Orn/DAP/Arg decarboxylase 2 [Psychrobacter cryohalolentis K5]
          Length = 421

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 61/389 (15%), Positives = 111/389 (28%), Gaps = 47/389 (12%)

Query: 3   KTPY--YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P   Y+ D + L   + T      +   +L  A+K  A   +  TL +++DG  ++S 
Sbjct: 34  PSPLCAYIYDLEALEERITTMKRCLPD-NTQLFYAIKANAEPKILSTLAEHVDGFEAASA 92

Query: 61  YEVMLGHEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHK 116
            E+             +    K       A+    DTI   ++ +L + +    A +L  
Sbjct: 93  GELNWLQTHQPNHPIIFGGPGKLTSDLQQAIHQQIDTIHVESLVELTRIQILSQALQLPV 152

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCEN 169
           +I LR+N  +              +  G       ++             G  FH     
Sbjct: 153 RIFLRMNIDIGDIGSSKLVMGGKPTPFGLDETHLKQALAIIDSSPFIEFCGFHFHLMSHQ 212

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIE------WISLGGGIHFTDKDYPVKDFCQRLKEFS- 222
            S      +++   +    +            I++GGGI       P     +   +   
Sbjct: 213 LSVERHLLLMQRYMEMVKKWQHDYPSLPSNLTINVGGGIGIHYDQQPQHFEWEVFCQQLA 272

Query: 223 ----EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQE 277
                     +  E G  I          VLDI +N+    ++      H          
Sbjct: 273 SILTANLQFTVRFEIGRFITAPCGYYVMEVLDIKKNLGETFVIGHGGTHHFRTPAAQQHN 332

Query: 278 SATIYPNTGPYTAM--------------------VCGRSCLAGDIFGEFHFEKPVKIGDR 317
                       AM                    + G+ C   DI  +  +   + IGD 
Sbjct: 333 HPFFIVPRRMSHAMENKLQANLIEQAAITGTKATLVGQLCTPKDILAKDQWIDALHIGDY 392

Query: 318 ISFEDVAGYNINRKN-WFNGINMPTIAVK 345
           + F     Y  N  +  F     P +   
Sbjct: 393 LVFTLAGAYAWNISHQNFLMHQPPKMIFL 421


>gi|77359149|ref|YP_338724.1| diaminopimelate decarboxylase [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76874060|emb|CAI85281.1| diaminopimelate decarboxylase, PLP-binding [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 401

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 47/372 (12%), Positives = 109/372 (29%), Gaps = 28/372 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P+++ D   L ++L   +       VKL  A+K      +   L+        +S  
Sbjct: 19  LDSPFFVYDLDTLNSHLAQLV---AQTEVKLWYAVKANPLSKIIQCLDNAGFNFDVASKG 75

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKA--QKLHK 116
           E+          +        K  +           T +  +++Q+    ++A  Q    
Sbjct: 76  ELEQVLAQGVSSDRVLNTGPAKSPKQIKHFIERGVRTFVAESINQVRWLNEQAKLQNCQL 135

Query: 117 KIGLRINPSVSYSK---------FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
           ++ LR+       +                  +  L     D +  +  ++     +   
Sbjct: 136 QVLLRVQLRWPEGEKNPLGGDSLTPFGLGCTEWQALNITDYDALSFDGLHIFQWG-NMLS 194

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC-----QRLKEFS 222
             K    +S M+  + +        ++ + LGGG+        +            K   
Sbjct: 195 TQKLSELWSQMIAPLSQLARDLNINLKILDLGGGLGIPYTQNDITLNWDDLITALAKIKK 254

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATI 281
           +    ++++E G   V         V++  +N     ++    +   +   +  Q+    
Sbjct: 255 QAGVEELWMELGRYAVGECGHYAAPVVERKQNYGQQQVILSGGINHLLRPAVTSQDFPAA 314

Query: 282 Y---PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337
                +T      + G  C A D  GE      +   D + F     Y  +     F   
Sbjct: 315 LLRDSHTPTQAMSLYGPLCTALDSLGEHALPSDLNEHDWLVFSQCGAYGFSESMPYFLCH 374

Query: 338 NMPTIAVKNVDG 349
            +    V   + 
Sbjct: 375 ELAGEYVLEQNK 386


>gi|254227376|ref|ZP_04920808.1| Diaminopimelate decarboxylase [Vibrio sp. Ex25]
 gi|262396359|ref|YP_003288212.1| vibrioferrin decarboxylase protein PvsE [Vibrio sp. Ex25]
 gi|151939988|gb|EDN58814.1| Diaminopimelate decarboxylase [Vibrio sp. Ex25]
 gi|262339953|gb|ACY53747.1| vibrioferrin decarboxylase protein PvsE [Vibrio sp. Ex25]
          Length = 400

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 59/354 (16%), Positives = 116/354 (32%), Gaps = 34/354 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE-VM 64
            Y+ D   L  ++    ++     V+L  A K   +  +  TL  Y+DG  ++S  E   
Sbjct: 28  AYVYDLNALEEHIKQLRHVLPR-NVELFYAAKANPSGPILKTLAPYVDGFEAASGGELAH 86

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLHKK--IGLR 121
           L  ++               E+   +    D I   ++++L +     ++L++   I LR
Sbjct: 87  LHQQQLDKPLIFGGPGKMPSELQQAIELDVDAIHVESLTELQRIGALTERLNRPASIFLR 146

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNCENKSFLC 174
           +N  +              +  G    +   + +        ++ G  FH          
Sbjct: 147 MNIDIGDITLSKLAMGGKPTPFGLDESELSNALMLLRDFPQVSLKGFHFHLMSHQLDVER 206

Query: 175 FSAMLKNIEKEFGHFITQIE----WISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYS 226
             A+++   +    +  + E     I+LGGG+        + +P  +FC +L+    K  
Sbjct: 207 HLALMQRYFQVVKAWQQEFELGELMINLGGGMGINYQNPEQHFPWMEFCDKLEFLIAKEQ 266

Query: 227 ---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282
                +  E G  I          VLDI +N+    ++      H         +   + 
Sbjct: 267 VQDWTLRFECGRFITAACGYYVMEVLDIKQNLGENFVIARGGTHHFRTPAAQSHDHPFVI 326

Query: 283 PNTGPYT----------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
             +  +           A   G+ C   D+         V IGD + F     Y
Sbjct: 327 LKSEQHHEISHPIQHAQATFAGQLCTPKDVLARNQHVAHVDIGDYVVFTLAGAY 380


>gi|73669670|ref|YP_305685.1| ornithine decarboxylase [Methanosarcina barkeri str. Fusaro]
 gi|72396832|gb|AAZ71105.1| ornithine decarboxylase [Methanosarcina barkeri str. Fusaro]
          Length = 390

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 56/367 (15%), Positives = 123/367 (33%), Gaps = 30/367 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+  +D QK+  + D  +        K+  A+K      +   L         +++YE
Sbjct: 30  ETPFLTVDLQKIEQSYDELVEHM--PFAKIHYAVKANPMDEVVLALKSKGSNFDVATVYE 87

Query: 63  V-MLGHEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +  L       E  +Y    K  +             + ++ S L K   KA        
Sbjct: 88  LDQLLRLGVEPERISYGNTIKKEKDIEYAYEKGVRLYVTDSDSDLKKLARKAPGSRVFFR 147

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177
           +      +         + P        K  +++E   +   GL FH   + +    +  
Sbjct: 148 ILTESDGADWPLSKKFGSHPDLIY----KLILKAEKLGLEPYGLSFHVGSQQRDIGQWDN 203

Query: 178 MLKNIEKEF---GHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYS----VQ 228
            +   +  F         ++ I+LGGG       + + ++ +   ++ F  +       +
Sbjct: 204 AISKCKYLFEAAAEKGIHLKMINLGGGFPAKYQAQAHDLETYAGEIRRFLHEDFGEELPE 263

Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE-----AHVPDYLLYQESATIYP 283
           I +EPG ++V N   + + V+ IS+  +        ++       +       +      
Sbjct: 264 IIIEPGRSLVANAGIIVSEVVMISKKARFNQYKWVYLDIGKFGGLIETLDECIKYPIFCD 323

Query: 284 NTG-PYTAMVCGRSCLAGDIFG---EFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338
             G     ++ G +C + DI     ++ F   ++ G+R+       Y  +  +  FNG  
Sbjct: 324 KKGCAEEVILAGPTCDSMDILYEHHKYTFPHTMREGNRVYIFTAGAYTQSYSSVCFNGFP 383

Query: 339 MPTIAVK 345
                + 
Sbjct: 384 PLKAYLI 390


>gi|310816188|ref|YP_003964152.1| decarboxylase, pyridoxal-dependent [Ketogulonicigenium vulgare Y25]
 gi|308754923|gb|ADO42852.1| decarboxylase, pyridoxal-dependent [Ketogulonicigenium vulgare Y25]
          Length = 395

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 48/361 (13%), Positives = 112/361 (31%), Gaps = 22/361 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D  ++            +A   +  A+K      + + L         +S  E+ 
Sbjct: 37  PTLVLDIDRVEEQYRALKAGLGHAD--IHYAVKANPHRDVLERLVHLGSHFDCASRGEIE 94

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +        ET +Y    K     A  ++    +F   ++    K        ++ +R+ 
Sbjct: 95  MCLALGARPETISYGNTIKRARDIAFAASVGVTLFAVDAEEELVKIAENAPGAQVYVRLI 154

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S + + L+        +     D+         G  FH   + +    +   L    
Sbjct: 155 VEASQADWPLSRKFGCDGEMALNLLDRAVELGLEPLGFSFHVGSQTRRADFWIPALDAFA 214

Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEK--YSVQIYLEPGE 235
             +         +  +++GGG      +    P +     ++  + +  +  ++  EPG 
Sbjct: 215 GIWDEARARGHNLSLLNIGGGFPAFYGEEIQGPTRYAASVMELVTARFGHVERVMAEPGR 274

Query: 236 AIVTNTTTLNTTVLDI----SENIKNLVIVDSSVEAHVPDYLLYQ-ESATIYPNTGPY-- 288
            +V     +   V+        ++   V +     + + +          + P+ G    
Sbjct: 275 GMVAEAGMIVAEVVLTSRKSERDMHRWVYLSIGRFSGLAETEGEAIRYQFVTPHDGEAMG 334

Query: 289 TAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKNW-FNGINMPTIAV 344
             +V G SC + D+  E         +K GD++   +   Y     +  FNG     +  
Sbjct: 335 PCIVAGPSCDSADVLYEKRPMNLPLALKSGDKVLIRNTGAYTSTYSSVCFNGFPPLDVVA 394

Query: 345 K 345
            
Sbjct: 395 I 395


>gi|193215600|ref|YP_001996799.1| Orn/DAP/Arg decarboxylase 2 [Chloroherpeton thalassium ATCC 35110]
 gi|193089077|gb|ACF14352.1| Orn/DAP/Arg decarboxylase 2 [Chloroherpeton thalassium ATCC 35110]
          Length = 452

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 54/390 (13%), Positives = 119/390 (30%), Gaps = 33/390 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLA--LKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P ++I ++ +      AL   K    K+  A   K      +    +Q        S 
Sbjct: 47  GSPLFVISERTIREVYQEALSAFKTRYPKVQFAWSYKTNYLNAVCKVYHQEGSWAEVVSG 106

Query: 61  YEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           +E          G    +N     + ++   + +   I  +   +L +    A +L +  
Sbjct: 107 FEFEKALANGVPGGKIIFNGPDKTEADLRKAIEHGALIHIDHFDELYEIMRLAPELGQTA 166

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCK---DKIESEIKNVNGLMFHNNCENKSFLCF 175
            + +  ++    +   D        GE        + +    + GL  H      +   +
Sbjct: 167 KVAVRINMDTGIYPRWDRFGFNYENGEAWAAINKIMPAPNLELVGLHTHIGTYIMTPNAY 226

Query: 176 SAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY------ 225
           +   + +          +   I+++ LGGG    +                + Y      
Sbjct: 227 AIATEKLAALVVRIERKYKHPIKYLDLGGGFASKNTLKGAYLPGSDTCPSFDDYAEAVTE 286

Query: 226 -----------SVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDY 272
                         ++LE G A++     L  TVL      + +  +++D  V      +
Sbjct: 287 TLINSDIQYEQMPALFLETGRALIDEAGYLLGTVLANKRLADGRRSLVIDIGVNNLFTSF 346

Query: 273 LLYQES-ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                               + G  C+  D+  E      ++ GD +  + V  YN+ + 
Sbjct: 347 WYNHHIVPARMNQRDTEDTTIYGPLCMNIDVIREAVMFPVLEKGDPVVIKRVGAYNMTQW 406

Query: 332 NWFNGINMPTIAVKNVDGTIKAIRE-FSYN 360
             F     P + + +++G    IRE  +  
Sbjct: 407 LQFITY-RPKVVLIDMNGQPHIIRENETLE 435


>gi|260425449|ref|ZP_05779429.1| decarboxylase, pyridoxal-dependent [Citreicella sp. SE45]
 gi|260423389|gb|EEX16639.1| decarboxylase, pyridoxal-dependent [Citreicella sp. SE45]
          Length = 406

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 53/362 (14%), Positives = 112/362 (30%), Gaps = 24/362 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  +ID Q +  +             ++  A+K   A  +  TL +      ++S  E+ 
Sbjct: 48  PTLVIDTQTVARHYAALAQGLGR--ARIHYAVKANPAPEILRTLTRLGSNFDAASRTEIA 105

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +        +  ++    K     A        +F   ++    K        ++ +R+ 
Sbjct: 106 MCLAAGATADRISFGNTVKKVSDVAWAHAQGVTLFAADAEQELEKIAEHAPGARVYIRVI 165

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA---MLK 180
              + + + L                          GL FH   + +    ++     + 
Sbjct: 166 VENTEADWPLTRKFGCSRDKVLHLFAVARQLGLMPVGLSFHVGSQTRRAQMWAPVLDQVA 225

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKY--SVQIYLEPGE 235
            I         ++  +++GGG         D P       +    E++    ++  EPG 
Sbjct: 226 AIWHAARDAGHEMSLLNIGGGFPAFYGEAIDAPACYAADVMTLVHERFGDVPEVMAEPGR 285

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPNTGP 287
            +V     +   VL +S+   N +           S +   + + + YQ   T   +   
Sbjct: 286 GLVAEAGAIAAEVLLVSKKSDNDLHRWVYLDIGKFSGLAETIEEAIRYQF-LTDRDHEDT 344

Query: 288 YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIA 343
              ++ G SC + D+  E         ++ GDRI   +   Y     +  FNG     + 
Sbjct: 345 GACILAGPSCDSADVLYEKRPVELPLGLRAGDRIVIRNCGAYTSTYASVGFNGFPPLDVV 404

Query: 344 VK 345
             
Sbjct: 405 AI 406


>gi|163868811|ref|YP_001610035.1| lysine/ornithine decarboxylase [Bartonella tribocorum CIP 105476]
 gi|161018482|emb|CAK02040.1| lysine/ornithine decarboxylase [Bartonella tribocorum CIP 105476]
          Length = 377

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 48/359 (13%), Positives = 108/359 (30%), Gaps = 33/359 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   + +N          +  ++  A+K   A  +   L+       ++S+ E+ 
Sbjct: 18  PCLIVDLDVVRDNYLNFKKALPQS--RIFYAIKANPAPEILRLLSSLGSSFDAASVAEIE 75

Query: 65  LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +        E  ++      +     A          + + ++ K    A        + 
Sbjct: 76  MALKAGATPERISFGNTIKKERDIAQAYALGVSLYAVDCIEEVEKIARAAPGARVFCRVL 135

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179
                           +              +    +   G+ FH   +      +   L
Sbjct: 136 T----DGKGAEWPLSRKFGCVPAMAVDVLKHAHQLGLQAYGVSFHVGSQQVDLSAWDRAL 191

Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSVQIY 230
            +    F         ++ +++GGG           +          LK+       +  
Sbjct: 192 SDAAIVFKNLEQEGISLKLVNMGGGFPTRYLKDVPTEQVYGTAVFDSLKKHFGNRIPETI 251

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIY 282
           +EPG A+V N   + T V+ IS+   N  +          + +   + + + Y    T +
Sbjct: 252 IEPGRAMVGNAGVIRTEVVLISKKADNDNVRWVYLDIGKFNGLAETMDEAIRYP-IETSH 310

Query: 283 PNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337
            +      ++ G +C + D+  E   +     + IGD+I       Y     +  FNG 
Sbjct: 311 DDKVMEPCILAGPTCDSADVLYEKTPYPLPLSLTIGDKILIHGTGAYTTTYASVAFNGF 369


>gi|330947151|ref|XP_003306849.1| hypothetical protein PTT_20120 [Pyrenophora teres f. teres 0-1]
 gi|311315441|gb|EFQ85060.1| hypothetical protein PTT_20120 [Pyrenophora teres f. teres 0-1]
          Length = 445

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 54/361 (14%), Positives = 101/361 (27%), Gaps = 31/361 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++        + +  + VK   A+KC     +   +     G   +S  E+  
Sbjct: 66  FFIADLGEVYR--QHLRWKKNLSRVKPHYAVKCNPDPQVLRLMTALGLGFDCASKNEIET 123

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       Y    K        +          +    +K K      ++ LRI  
Sbjct: 124 VLNLGVDPSRIIYAQPCKTKSYVRYAAQSGVKQMTFDNADELYKTKQLFPDAELYLRILT 183

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S S   L+           +  +  +    NV G+ FH          F   +++   
Sbjct: 184 DDSASLCRLSQKFGAALDTTAELLELAKKLELNVVGVAFHVGSGASDPKAFIKAVQDARF 243

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            F         +  + +GGG        P+        +      +++  EPG   V+  
Sbjct: 244 VFDQAAALGFNMHTLDVGGGFTGDVTFEPMAAVLSAALDEYFPPHIRVIGEPGRYYVSTA 303

Query: 242 TTLNTTVLD---------------ISENIKNLVIVDSSVEAHVPDYL---------LYQE 277
            TL   V+                +  N        S +  H              LY  
Sbjct: 304 FTLACHVIARRAVNDATLGTTSYMLYMNDGVYGNFSSIIFDHQHPVPRVLKNGNDVLYDV 363

Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNG 336
             + Y         + G +C   D+          + +GD + FE++  Y       FNG
Sbjct: 364 RRSGYDTPSQVEYSIWGPTCDGIDVISSSCTFPELLDVGDWLYFEEMGAYTKCSATRFNG 423

Query: 337 I 337
            
Sbjct: 424 F 424


>gi|71005058|ref|XP_757195.1| hypothetical protein UM01048.1 [Ustilago maydis 521]
 gi|46096557|gb|EAK81790.1| hypothetical protein UM01048.1 [Ustilago maydis 521]
          Length = 519

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 53/419 (12%), Positives = 106/419 (25%), Gaps = 72/419 (17%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++        ++R    +    A+KC     +   L     G   +S  E+  
Sbjct: 101 FFVADLSEVYR--QHLRWMRALPRIVPFYAVKCNPDPYVLQLLGALGTGFDCASNGEIEA 158

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
             +         Y    K           N     F+ + +L K K         + +  
Sbjct: 159 VLKLGINPARIIYANPCKAASFVRHAAAHNVGLTTFDNMDELEKMKRYHPSCKLVVRILT 218

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           + S S     L            +  ++      +V G+ FH          F   +   
Sbjct: 219 DDSKSAC--QLGLKFGAPLASVPRLLERARELELDVVGVSFHVGSGCYDPDSFRDAVYRA 276

Query: 183 EKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI---------- 229
              F          + + +GGG    + +         +  +                  
Sbjct: 277 RCAFEMGKQAGFSFDLLDVGGGFGHDNFEMVAGVLGPAIDAYFPDEDFAPGGKEVVGKVN 336

Query: 230 ----YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE-------- 277
                 EPG   V +   L T ++ +     +  +      A     + YQ         
Sbjct: 337 GLRIIAEPGRFYVHSAFALATNIIAVRRGEPSAAMDHVEATAPKAQVMYYQNDGLYGSFN 396

Query: 278 ---------SATIYPNTGPYTAM-----------------------------VCGRSCLA 299
                       +      Y                                V G +C +
Sbjct: 397 CVIFDHVKVHPKVLTLGHEYVYEPTIGSPGVRAVSAADSRLQQEAMTLESCSVWGPTCDS 456

Query: 300 GDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTI-AVKNVDGTIKAIRE 356
            D   +       +++GD + +E++  Y I   + FNGI    I            +R+
Sbjct: 457 IDCVRDHVELPKGLQVGDWLVYENMGAYTICAASTFNGIRRSEIRYTLGHGQDADIVRQ 515


>gi|283469362|emb|CAQ48573.1| pyridoxal-dependent decarboxylase decarboxylase [Staphylococcus
           aureus subsp. aureus ST398]
          Length = 400

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 54/381 (14%), Positives = 107/381 (28%), Gaps = 36/381 (9%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66
           Y+ D   L ++L         +  ++  A+K  +   + DT++QY++G   +S  E+  G
Sbjct: 21  YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79

Query: 67  HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                     +       +    AV      I   ++ +L +     +   K   + +  
Sbjct: 80  LAFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRV 139

Query: 125 S-VSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE----NKSF 172
           +                ++ G          +  +     +++G  FH+       N   
Sbjct: 140 NLAGPFPNATLHMAGRPTQFGISEDEVDDVIEAALAMPNIHLDGFHFHSISNNLDSNLHV 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKDFCQRLKEFSEKY 225
                  K  +         ++ I+LGGGI           +     +  + L    E  
Sbjct: 200 DVVKLYFKKAKSWSEKHRFPLKHINLGGGIGVNYADLTSQFEWDNFVEKFKTLIVEQEME 259

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284
            V +  E G  IV +     T VLDI +       +                        
Sbjct: 260 DVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFDIYR 319

Query: 285 TGPYTA------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                              + G+ C   D+F      + +  GD I F+    Y  +  +
Sbjct: 320 YKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIEAISTGDVIVFKYAGAYGWSISH 379

Query: 333 W-FNGINMPTIAVKNVDGTIK 352
             F     P           +
Sbjct: 380 HDFLSHPHPEFIYLTQTKEDE 400


>gi|328947178|ref|YP_004364515.1| ornithine decarboxylase [Treponema succinifaciens DSM 2489]
 gi|328447502|gb|AEB13218.1| Ornithine decarboxylase [Treponema succinifaciens DSM 2489]
          Length = 389

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 51/372 (13%), Positives = 114/372 (30%), Gaps = 33/372 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TP  +I+  K+  N  T          ++  A+K      + + L+        +S Y
Sbjct: 23  LETPNIVINLNKVKKNFLTLKDSFPY--ARIFYAIKANPGEPVLELLSDLGSNFDIASRY 80

Query: 62  EVMLG-HEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+ L        +  +Y    K  +               ++   L    + A      +
Sbjct: 81  ELDLISKFNVSPDRLSYGNTIKKAKDIKYFYDKGVRMFATDSRDDLKNIAEFAPGSKIYV 140

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFS 176
            + +  S +          +            + +    +   G+ FH   + +    ++
Sbjct: 141 RILVENSATA---DWPLSRKFGCHPDMAYDLIVMARDLGLVPYGISFHVGSQQRDIGQWN 197

Query: 177 AMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVK------DFCQRLKEFSEKYS 226
             +   +  F         ++  I++GGG   +  D          +  + L +      
Sbjct: 198 DAIAKAKYLFNSLEEEESIKLSMINMGGGFPASYIDPTNDLSVYASEISRYLHDDFGDEI 257

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATI 281
            QI LEPG ++V ++  L + V+  S          + +        +       +   I
Sbjct: 258 PQIILEPGRSLVGDSGILTSEVILTSRKNNTALARWVYLDSGKFNGLIETLDESIKYPVI 317

Query: 282 YPNTGPY----TAMVCGRSCLAGDIF---GEFHFEKPVKIGDRISFEDVAGYNINRKNW- 333
                P       ++ G +C + DI     ++     +K GD++ +     Y     +  
Sbjct: 318 TSQDAPEKKEGEVIIAGPTCDSMDIMYENAKYKLPVSLKAGDKVYWLSTGAYTSTYASVA 377

Query: 334 FNGINMPTIAVK 345
           FNG         
Sbjct: 378 FNGFPPIKTYFM 389


>gi|237740055|ref|ZP_04570536.1| diaminopimelate decarboxylase [Fusobacterium sp. 2_1_31]
 gi|229422072|gb|EEO37119.1| diaminopimelate decarboxylase [Fusobacterium sp. 2_1_31]
          Length = 400

 Score =  144 bits (364), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 54/387 (13%), Positives = 129/387 (33%), Gaps = 43/387 (11%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +YL D++ + N++     +     ++ L ++KC +   +  ++     G  ++SL EV++
Sbjct: 17  FYLYDEKIIKNSISNLRKVFPE--IEFLYSVKCNSNVNVLKSIFSEGFGADAASLAEVLM 74

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             +         Y+   K  +   V  N   +I +++ ++ +    ++ L+K   + +  
Sbjct: 75  ARKLDLDKNKIYYSAPGKTSKDIEVAINESNLIADSIEEIRRINMVSKSLNKVTEIGVRL 134

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
           +  +S                   +    +   + G+  H   +  +    +   KN+  
Sbjct: 135 NPDFSGKASKFGVDEDIFYDFLHNN--SCQNIKIVGIHVHLKSQELNVETLANYYKNMFL 192

Query: 185 EFGHFI----TQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY---------SVQIYL 231
                      +++++++G G+        V     RLK   +            + I++
Sbjct: 193 LVEKVQNTLSYKLKYVNMGSGMGIQYSKSDVPLDLDRLKNLVKDNLSEFKKHNPDITIFI 252

Query: 232 EPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPD-----YLLYQESATIYP-- 283
           E G  +   +      VLD   +     +I+ +++   +          Y++   +    
Sbjct: 253 ETGRYVTAKSGFYIMKVLDKKVSYGTTYLILKNTLNGFIKPSVIKLVSKYEKENPVSWEP 312

Query: 284 ----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
                                   + G  C A D+  E      +  GD I   +   Y 
Sbjct: 313 LFTSKDAFEILTFKEETDKKEKVTLVGNLCTATDVIAEDIVLPSMDCGDIIVINNAGSYA 372

Query: 328 INRKN-WFNGINMPTIAVKNVDGTIKA 353
                  F+    P     +VDG+IK 
Sbjct: 373 AVLSPMQFSSQEKPVEVFLSVDGSIKI 399


>gi|257469983|ref|ZP_05634075.1| putative pyridoxal-dependent decarboxylase [Fusobacterium ulcerans
           ATCC 49185]
 gi|317064209|ref|ZP_07928694.1| orn/DAP/Arg decarboxylase 2 [Fusobacterium ulcerans ATCC 49185]
 gi|313689885|gb|EFS26720.1| orn/DAP/Arg decarboxylase 2 [Fusobacterium ulcerans ATCC 49185]
          Length = 403

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 63/393 (16%), Positives = 136/393 (34%), Gaps = 50/393 (12%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y+ + +++ +         + +G + L ++K      +   +++   G  ++S  EV 
Sbjct: 12  PCYIYNGEQIASQCQKLKR--ELSGFEFLYSIKTNPFSHIIQNISKEGFGADAASAGEVF 69

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           L  +     E   Y+   K  E   +     TII +++S++      A K  + + + I+
Sbjct: 70  LSLKNGIAPEKIFYSAPGKTEEAIEICYGKCTIIADSISEIRHINAIAAKHKEIVKIGIS 129

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCENKSFL--- 173
            +   S F + +     S+ G   +  +       E     + G+  H   +   F    
Sbjct: 130 VN---SNFSMKNECGTSSKFGIDIEQLLKVEDTLAEYSNIKITGIHIHIQSQILDFQILG 186

Query: 174 -CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-KDYPVKDFCQRLKEFSEKYSVQIY- 230
             +    +  +K        IE+I+ G GI     +        ++L +   + + + + 
Sbjct: 187 KYYKNCFELAKKIHSMKNVNIEFINFGSGIGALYRETQDKSVDLEKLNKMISEIAEENHA 246

Query: 231 -------LEPGEAIVTNTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYL---LYQESA 279
                  +E G  I  N     T ++DI E++     IV++++   +   +   +Y+ + 
Sbjct: 247 VLNAKLLIETGRFITCNAGKYYTPIVDIKESLGQKYLIVENAMNGFMRPAIANLIYKAAG 306

Query: 280 TIYPNTGP-------------------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
            I     P                       + G  C A D+  E       +IGD I  
Sbjct: 307 EILTGYEPLYTCQDEFSVQVLNESVEKEKVNIVGNLCTALDVIRENAEVNHAQIGDIIEI 366

Query: 321 EDVAGYNINRKN-WFNGINMPTIAVKNVDGTIK 352
            +   Y  +     F+   +P       D   +
Sbjct: 367 TNAGSYAYSLSPLLFSSHKIPKQYYLYKDKIYE 399


>gi|83593028|ref|YP_426780.1| ornithine decarboxylase [Rhodospirillum rubrum ATCC 11170]
 gi|83575942|gb|ABC22493.1| ornithine decarboxylase [Rhodospirillum rubrum ATCC 11170]
          Length = 421

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 52/365 (14%), Positives = 116/365 (31%), Gaps = 25/365 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP  ++D   +  N             ++  A+K   A  +   L        ++SL E
Sbjct: 59  ETPCLVVDLDVVEGNYRALRGAL--PQAEVYYAVKSNPAPPLVARLIALGSSFDTASLPE 116

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           + L           ++    K  +  A        +F   ++    K        ++  R
Sbjct: 117 IDLCLGLGADPAKLSFGNTIKKSKDIAAAYERGVRLFAFDAEEELEKLAEHAPGSQVFCR 176

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +      +++ L+        +      K ++     +G+ FH   + K    +   L+ 
Sbjct: 177 LFVDNVGAEWPLSRKFGCSVAMAGDLLIKAQALGLEAHGVSFHVGSQQKDLGQWDVALEK 236

Query: 182 IEKEFGH---FITQIEWISLGGGIHFTDKD-------YPVKDFCQRLKEFSEKYSVQIYL 231
             + F         ++ ++LGGG+  +  +                +    +    ++ +
Sbjct: 237 AAELFRDLAAVGITLKMVNLGGGLPTSYGNRLPYGVDEYGAHVLGAVDRLFDGPRPRLIV 296

Query: 232 EPGEAIVTNTTTLNTTVL-----DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286
           EPG  +  N   L T V+     D +++ + + I                    I     
Sbjct: 297 EPGRYMGGNAGVLETEVVLVSRKDAADDRRWVYIDAGRFNGLAETEGEAIRYPIISDKDD 356

Query: 287 PYT--AMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGI-NM 339
             T   ++ G +C + DI  +   +     +K GDR+       Y  +  +  FNG   +
Sbjct: 357 GETGPVIIAGPTCDSVDILYDKAGYTLPLSLKAGDRLRLLSTGAYTTSYASVGFNGFLPL 416

Query: 340 PTIAV 344
               +
Sbjct: 417 KAHYL 421


>gi|28901517|ref|NP_801172.1| putative diaminopimelate decarboxylase protein [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|153838144|ref|ZP_01990811.1| vibrioferrin biosynthesis protein PvsE [Vibrio parahaemolyticus
           AQ3810]
 gi|260363069|ref|ZP_05775938.1| vibrioferrin biosynthesis protein PvsE [Vibrio parahaemolyticus
           K5030]
 gi|260880356|ref|ZP_05892711.1| vibrioferrin biosynthesis protein PvsE [Vibrio parahaemolyticus
           AN-5034]
 gi|260894723|ref|ZP_05903219.1| vibrioferrin biosynthesis protein PvsE [Vibrio parahaemolyticus
           Peru-466]
 gi|260900073|ref|ZP_05908468.1| vibrioferrin biosynthesis protein PvsE [Vibrio parahaemolyticus
           AQ4037]
 gi|28810064|dbj|BAC63005.1| putative diaminopimelate decarboxylase protein [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|149748460|gb|EDM59319.1| vibrioferrin biosynthesis protein PvsE [Vibrio parahaemolyticus
           AQ3810]
 gi|308089412|gb|EFO39107.1| vibrioferrin biosynthesis protein PvsE [Vibrio parahaemolyticus
           Peru-466]
 gi|308092324|gb|EFO42019.1| vibrioferrin biosynthesis protein PvsE [Vibrio parahaemolyticus
           AN-5034]
 gi|308110034|gb|EFO47574.1| vibrioferrin biosynthesis protein PvsE [Vibrio parahaemolyticus
           AQ4037]
 gi|308112056|gb|EFO49596.1| vibrioferrin biosynthesis protein PvsE [Vibrio parahaemolyticus
           K5030]
          Length = 400

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 59/354 (16%), Positives = 116/354 (32%), Gaps = 34/354 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE-VM 64
            Y+ D   L  ++    ++     V+L  A K   +  +  TL  Y+DG  ++S  E   
Sbjct: 28  AYVYDLNALEEHIKQLRHVLPK-NVELFYAAKANPSGPILKTLAPYVDGFEAASGGELAH 86

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLHKK--IGLR 121
           L  ++               E+   +    D I   ++++L +     ++L++   I LR
Sbjct: 87  LHQQQLDKPLIFGGPGKMPSELQQAIDLDVDAIHVESLTELKRIGALTERLNRPASIFLR 146

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNCENKSFLC 174
           +N  +              +  G    +   + +        ++ G  FH          
Sbjct: 147 MNIDIGDITLSKLAMGGKPTPFGLDESELSNALMLLRDCPQVSLKGFHFHLMSHQLDVER 206

Query: 175 FSAMLKNIEKEFGHFITQIE----WISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYS 226
             A+++   +    +  + E     I+LGGG+        + +P  +FC +L+    K  
Sbjct: 207 HLALMQRYFQVVKTWQQEFELGELMINLGGGMGINYQNPEQHFPWMEFCDKLEFLIAKEQ 266

Query: 227 ---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282
                +  E G  I          VLDI +N+    ++      H         +   + 
Sbjct: 267 VQDWTLRFECGRFITAACGYYVMEVLDIKQNLGESYVIARGGTHHFRTPAAQSHDHPFVI 326

Query: 283 PNTGPYT----------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
             +  +           A   G+ C   D+         V IGD + F     Y
Sbjct: 327 LKSEQHHEISHPIQHAQATFVGQLCTPKDVLARNQHVAHVDIGDYVVFTLAGAY 380


>gi|296425569|ref|XP_002842313.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295638576|emb|CAZ86504.1| unnamed protein product [Tuber melanosporum]
          Length = 438

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 55/380 (14%), Positives = 113/380 (29%), Gaps = 37/380 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++        +      V+   A+KC     +   L     G   +S  E+  
Sbjct: 64  FFVADLGEVYR--QHMRWKINLPRVEPFYAVKCNGDEKVLSLLAALGTGFDCASKAEIQQ 121

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       Y    K        +  +  +    +    +K K    H ++ LRI  
Sbjct: 122 VLNLGVNPSRIIYANPCKTASYIRYAAEENVRMMTFDNAEELYKVKKFFPHARLFLRICT 181

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+              +  +    +V G+ FH    +     F   +++  +
Sbjct: 182 DDSKALCRLSLKYGAPLDSTRHLLELAKDLRLDVVGVSFHVGSGSYDPTAFLTAVQDARR 241

Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ---IYLEPGEAIV 238
            F         +  + +GGG      +   ++    L    ++Y      +  EPG   V
Sbjct: 242 VFNEATEVGYDLRTLDVGGG----YGNDNFEEIAAVLGPAIDEYFPPSVRVIAEPGRYYV 297

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSV---------------EAHVPDYLLYQESATIYP 283
           ++  T+ T ++      ++     S +                 H        +    Y 
Sbjct: 298 SSAFTIATHIIARRTVQEDGSRNPSYMLYLNDGVYGNFSGILFDHQKPVPKVLKRGDKYF 357

Query: 284 NTGPYT------AMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNG 336
                T        + G +C   D    F      ++ GD + F D+  Y+      FNG
Sbjct: 358 FGSTPTDSQLTKYSIWGPTCDGIDCISSFSNLPEVLEAGDWLYFSDMGAYSKCSATKFNG 417

Query: 337 I--NMPTIAVKNVDGTIKAI 354
              N   + V +  G +  +
Sbjct: 418 FSDNHDVVYVVSDPGALALL 437


>gi|307566321|ref|ZP_07628760.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein
           [Prevotella amnii CRIS 21A-A]
 gi|307344898|gb|EFN90296.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein
           [Prevotella amnii CRIS 21A-A]
          Length = 400

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 66/386 (17%), Positives = 121/386 (31%), Gaps = 23/386 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           + TP +++ +++L  ++         K     +  ++K  +                  S
Sbjct: 13  LSTPCFILKEEELKKSIYGFKTALDTKFPNSIIGYSVKTNSLPYCLKIAKDNGCYAEVVS 72

Query: 60  LYEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            +E  L     F      YN           VL +   +   +  ++   ++ +     K
Sbjct: 73  YHEYRLALTCGFPKNHIIYNGPMKSKDTFLDVLKHKGIVNIESFREIEWLRELSCNEIYK 132

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCE 168
           +G+R+N  +S    +  +     SR G                E     + GL  H   +
Sbjct: 133 VGIRLNIDISKISPLDENHKEDDSRFGFSADSADFKNAIQQISEYSNVRLVGLHIHRTSK 192

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKY 225
            +S   +   L         +   IE+I LGGG          Y                
Sbjct: 193 TRSVDFYKNTLTYALSVINKYNLNIEYIDLGGGYFGEMPGKPTYADYVDAFYDVLKHSNN 252

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285
           + +I +EPG AIV +      TV+D+  +    V+        V       +    +   
Sbjct: 253 NYKIIVEPGNAIVASAFDYVCTVIDVKHHNDKNVVTTDGTRNDVDPLFHKTDYFKSFIYK 312

Query: 286 G-----PYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINM 339
                  +  +V G +CL  D        +  + +GD+I F  V  Y +     F     
Sbjct: 313 KSSEKCQHKQLVGGLTCLENDRLFVLEKGETTLCLGDKIVFNRVGAYTLCLTPLFIHY-F 371

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYNN 365
           P I VK  D       E++  D+   
Sbjct: 372 PVIYVKRGDEYCVVREEWTEKDFIMK 397


>gi|302692730|ref|XP_003036044.1| hypothetical protein SCHCODRAFT_81402 [Schizophyllum commune H4-8]
 gi|300109740|gb|EFJ01142.1| hypothetical protein SCHCODRAFT_81402 [Schizophyllum commune H4-8]
          Length = 477

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 47/365 (12%), Positives = 102/365 (27%), Gaps = 35/365 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++    +          V    A+KC     +   L     G   +S  E+  
Sbjct: 83  FFVADLGQVALQHERWTTALPE--VHPFYAVKCNPDPYVLRLLAALGTGFDCASNNEIAQ 140

Query: 66  GHE--KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
             +      +   +    K                   +     K        ++ LRI 
Sbjct: 141 VLKIGGIDPDRIIFANPCKATSFVRAAGRAGVHTMTFDNADELHKVARTHPAARLVLRIL 200

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S +   L               +   S   NV G+ FH          ++  +    
Sbjct: 201 TDDSKALCRLGLKFGAPLAAALGLLETARSLGLNVVGVSFHVGSGCYDPDVYADAIARAA 260

Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS---EKYSVQIYLEPGEAI 237
             F        +   + +GGG      +   +     +        +  ++I  EPG   
Sbjct: 261 AAFAMGRKAGYEFNLLDIGGGFEDATFEAAARVLRDAINVHFPDRHERGIRIIAEPGRFF 320

Query: 238 VTNTTTLNTTVLD-----------------ISENIKNLVIVDSSVEAHVPDYLLYQES-- 278
           V+   ++ T ++                  +         V  +    + D+ + Q    
Sbjct: 321 VSTAFSIATNIIARRATDEENANAGESDDEVKAMYYINDGVYGAFNCIMFDHQVVQPYVL 380

Query: 279 -----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKN 332
                  +       T  V G +C + D+  +       +++GD + F+++  Y +   +
Sbjct: 381 SMGGSFHVPSGAPMQTCSVWGPTCDSIDLVSKRATLPCALQVGDWLGFDNMGAYTVCAAS 440

Query: 333 WFNGI 337
            FNG 
Sbjct: 441 QFNGF 445


>gi|189193697|ref|XP_001933187.1| ornithine decarboxylase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187978751|gb|EDU45377.1| ornithine decarboxylase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 445

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 54/361 (14%), Positives = 100/361 (27%), Gaps = 31/361 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++        +    + VK   A+KC     +   +     G   +S  E+  
Sbjct: 66  FFIADLGEVYR--QHLRWKTNLSRVKPHYAVKCNPDPQVLRLMTALGLGFDCASKNEIET 123

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       Y    K        +          +    +K K      ++ LRI  
Sbjct: 124 VLNLGVDPSRIIYAQPCKTKSYVRYAAQSGVKQMTFDNADELYKTKQLFPDAELYLRILT 183

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S S   L+           +  +  +    NV G+ FH          F   +++   
Sbjct: 184 DDSASLCRLSQKFGASLDTTAELLELAKKLELNVVGVAFHVGSGASDPKAFIKAVQDARF 243

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            F         +  + +GGG        P+        +      +++  EPG   V+  
Sbjct: 244 VFDQAAALGFNMHTLDVGGGFTGDVTFEPMAAVLSAALDEYFPPHIRVIGEPGRYYVSTA 303

Query: 242 TTLNTTVLD---------------ISENIKNLVIVDSSVEAHVPDYL---------LYQE 277
            TL   V+                +  N        S +  H              LY  
Sbjct: 304 FTLACHVIARRTVNDATLGTTSYMLYMNDGVYGNFSSIIFDHQHPVPRVLKNGNDVLYDV 363

Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNG 336
             + Y         + G +C   D+          + +GD + FE++  Y       FNG
Sbjct: 364 RRSGYDTPSQVEYSIWGPTCDGIDVISSSCTFPELLDVGDWLYFEEMGAYTKCSATRFNG 423

Query: 337 I 337
            
Sbjct: 424 F 424


>gi|307107455|gb|EFN55698.1| hypothetical protein CHLNCDRAFT_133981 [Chlorella variabilis]
          Length = 527

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 52/364 (14%), Positives = 99/364 (27%), Gaps = 34/364 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ +   +       + +     V    A+KC    G+   L     G   +S  E+  
Sbjct: 154 FYVYNLAVVERLHAAWVRLMPR--VHPCYAVKCNPDEGLLAVLASLGAGFDCASEAELAR 211

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   +   Y    K  +           +    S+    K         + LRI  
Sbjct: 212 VLALGVAPDRLVYAHPCKPPKQIRWAQAHGVDLTTFDSESELAKMAQHHPGSGLLLRIRA 271

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
               ++  L +          +  +        V G+ FH     K+   FSA ++   +
Sbjct: 272 DDPAARCQLGNKYGAELACVPRLLEAAAGLGLRVRGVSFHVGSGAKNPAAFSAAIEAARR 331

Query: 185 EF---GHFITQIEWISLG---------GGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232
            F        +++ + LG            H      P        + F +   +++  E
Sbjct: 332 VFDLGAALGFRMDVLDLGGGFCGGEVGPDGHVDLGGVPDAINVALDRLFPDDGELRVIAE 391

Query: 233 PGEAIVTNTTTLNTTVLD----------ISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
           PG        T    +             + +      +  S+   V D+          
Sbjct: 392 PGRYFAEACATYACYINGWRGRAVEGGQQAYDYYITDGLYGSMNCLVYDHAELAPVGLRS 451

Query: 283 PNTGP---------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
           P   P         + + + G +C   D          ++ GD + F     Y I     
Sbjct: 452 PLLPPVAAGEDAALHPSTLFGPTCDGLDTVCRDVPMPRLRNGDWVLFPRFGAYTIAGAVN 511

Query: 334 FNGI 337
           FNG 
Sbjct: 512 FNGF 515


>gi|302542491|ref|ZP_07294833.1| putative pyridoxal-dependent decarboxylase, C- sheet domain protein
           [Streptomyces hygroscopicus ATCC 53653]
 gi|302460109|gb|EFL23202.1| putative pyridoxal-dependent decarboxylase, C- sheet domain protein
           [Streptomyces himastatinicus ATCC 53653]
          Length = 414

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 56/391 (14%), Positives = 104/391 (26%), Gaps = 38/391 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG----TTSS 58
            TP Y+ D  ++              GV++  A K      +   L +  DG       S
Sbjct: 15  GTPLYVYDLDRIDAARRDLFGWLPE-GVEVYYAFKANPHVDLVRALRE-GDGPACKAEIS 72

Query: 59  SLYEVMLGHEKF--GGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKL- 114
           S  E+    +    G +           E+   +     T    +   L      A    
Sbjct: 73  STGELAAALDGGYTGADILYTGPGKTPGELREAIARGVRTFSAESPGDLEHIGQAAVVHG 132

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNC 167
                L    S + S           ++ G                   ++ GL   +  
Sbjct: 133 VVADCLLRVNSATASASTGIRMTGKPTQFGIDSETVAELAPRLRSVPGTSIAGLHLFSQS 192

Query: 168 ENKS----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223
             K        F   ++   +        +  + +GGG       +  +D   +L+   E
Sbjct: 193 NAKDEDALIEEFRHTIEVAAQVEADLGVALRLLDIGGGFSVPYGRHGARDAYPKLRGELE 252

Query: 224 KYSVQIYL-----------EPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPD 271
                 +            E G  +V ++ TL  +V ++  +     ++ D+ +      
Sbjct: 253 AALDLRFPRWRRGELRIAVESGRYLVGDSGTLLASVSNVKTSRDRRFVILDAGINTFGGM 312

Query: 272 YLLYQESATIYPNTGPYTAM----VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
             L +         G         + G  C  GD+         +  GD I+  +   Y 
Sbjct: 313 SGLGRILPVSIRIEGDAEVTGKGTLAGPLCTPGDLLAREIDLPELDEGDVIAIPNTGAYG 372

Query: 328 INRK-NWFNGINMPTIAVKNVDGTIKAIREF 357
                  F G   P  AV      +   R  
Sbjct: 373 PTASLLMFLGRPAPAEAVVRGGEVLSVSRIE 403


>gi|148977324|ref|ZP_01813938.1| putative diaminopimelate decarboxylase protein [Vibrionales
           bacterium SWAT-3]
 gi|145963437|gb|EDK28701.1| putative diaminopimelate decarboxylase protein [Vibrionales
           bacterium SWAT-3]
          Length = 400

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 60/354 (16%), Positives = 120/354 (33%), Gaps = 34/354 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV-M 64
            YL D  +L  ++    ++     V+L  A K   +  +  TL  Y+DG  ++S  E+  
Sbjct: 28  AYLYDLNELEQHIKQMRHVLPK-NVELFYAAKANPSAPILRTLAPYVDGFEAASGGELSH 86

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLHK--KIGLR 121
           L  +                E++  +    D I   ++++L +     QKL++   I LR
Sbjct: 87  LQQQLLNKPLIFGGPGKMPSELEQAIQLDVDAIHVESITELQRIGALTQKLNRSASIFLR 146

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN----K 170
           +N  +              +  G    +   + +         + G  FH         +
Sbjct: 147 MNIDIGDITLSKLAMGGKPTPFGFDEAELDNAIMHLRDFPLIELKGFHFHLMSHQLDVSR 206

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYS 226
                    + +++    +  +   I+LGGG+        + +P  +FC +L+    +  
Sbjct: 207 HLALVQRYFQVVKQWKEQYSLEDLIINLGGGMGINYQDPSQHFPWIEFCDKLEFLIAEEH 266

Query: 227 VQIY---LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282
           +Q +    E G  I          VLDI +N+    ++      H         +     
Sbjct: 267 MQDWKLRFECGRYISAPCGYYVMEVLDIKQNLGENFVIARGGTHHFRTPAAQSHDHPFAV 326

Query: 283 PNTGPY----------TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
            +   +          TA + G+ C   D+       + + IGD + F     Y
Sbjct: 327 IHNQQHSTISNPIHHTTANLVGQLCTPKDVLARNQSIEYIDIGDYLVFTLAGAY 380


>gi|118593254|ref|ZP_01550639.1| ornithine decarboxylase [Stappia aggregata IAM 12614]
 gi|118434145|gb|EAV40801.1| ornithine decarboxylase [Stappia aggregata IAM 12614]
          Length = 376

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 49/365 (13%), Positives = 109/365 (29%), Gaps = 30/365 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   + +N +            +  A+K   A  +   L         +S+ E+ 
Sbjct: 17  PCVVVDLDIVRDNFEAFAKSL--PDTSVYYAVKANPAPEILSLLESLGSSFDCASVGEIE 74

Query: 65  LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +        +  +Y      +     A          + V ++ K    A     K+  R
Sbjct: 75  MVLATGASADRISYGNTIKKEKDIARAYQYGVRLFAVDCVEEVEKIARVA--PGSKVFCR 132

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +      +++ L+        +     +         +G+ FH   +  +   +   L  
Sbjct: 133 VLCDGVGAEWPLSRKFGCDPEMAPDVLEHAHRLGLVAHGVSFHVGSQQANLTAWDLALAM 192

Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIYLE 232
               F        +++ +++GGG                +   Q L +          +E
Sbjct: 193 AAGVFQEMALRGIELKMVNMGGGFPTRYLKDVPGVSTYGEAIFQALCKHFGNRLPSTIIE 252

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPN 284
           PG  +V N   +   V+ IS    N  +            +   + + + Y         
Sbjct: 253 PGRGMVGNAGMIEAEVVLISRKSANDDVRWVYLDIGKFHGLAETMDEAIRYPIRTP-RDG 311

Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGI-NM 339
                 ++ G +C + D+  E   +     + IGD++  E    Y        FNG   +
Sbjct: 312 DITAPCVLAGPTCDSVDVLYEKTPYELPVSLSIGDKVLIEACGAYTTTYSTVGFNGFAPL 371

Query: 340 PTIAV 344
            +  +
Sbjct: 372 ASFVI 376


>gi|255956161|ref|XP_002568833.1| Pc21g18390 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211590544|emb|CAP96736.1| Pc21g18390 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 429

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 49/364 (13%), Positives = 106/364 (29%), Gaps = 35/364 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  +++             G++   A+KC         L +   G   +S+ E+  
Sbjct: 52  FFIADLGQIIRQHRRWTQSV--PGIRPHYAVKCNRDPTFLKVLAELGTGFDCASIEEMRA 109

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       +    K     A       +     +       K      ++ LRI  
Sbjct: 110 VLSLGVDPARILFANPCKAPAAVAFAREVGVLRTTFDNIDELDAIKIHMPEAQLLLRIYA 169

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
           +   +   L +         E+   +      N+ G+ FH      +   F   +K+   
Sbjct: 170 NDEGAFICLGEKFGAQLDTTEELLSRAWELGLNMIGVSFHVGTGATNPASFCKGIKDARL 229

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            F          + + +GGG      +         ++       +    EPG     + 
Sbjct: 230 AFSQAERLGFHPKILDIGGGFQDDCFESMAPVIRDAIRSEF-PAGITTIAEPGRFFARSV 288

Query: 242 TTLNTTVL------------------DISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
            TL   V+                    ++ I    +     +  +  YL+  + A +  
Sbjct: 289 YTLVCRVISRRRQLGSAALSGVPDMLYQNDGIYGNFMNVIMEKEIMVPYLVKNKKARVLL 348

Query: 284 NTGP---------YTAMVCGRSCLAGDIFGEFH-FEKPVKIGDRISFEDVAGYNINRKNW 333
           +            +   + G +C + D       F+  VK+GD + ++++  Y       
Sbjct: 349 HKPKSEDALQVTDHRYSIWGPTCDSTDCVVREVTFDSEVKVGDWLKYKNMGAYTSTTATQ 408

Query: 334 FNGI 337
           FNG 
Sbjct: 409 FNGF 412


>gi|46202329|ref|ZP_00053400.2| COG0019: Diaminopimelate decarboxylase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 376

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 47/345 (13%), Positives = 98/345 (28%), Gaps = 29/345 (8%)

Query: 17  NLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETH 75
           N  +          ++  A+K   A  +   L +       +S  E+ L        E  
Sbjct: 29  NYHSLRRWLPL--AEVYYAVKANPAPEIVRMLTEEGSRFDVASRGEIDLCLSNGTPAERI 86

Query: 76  AYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFIL 133
           ++    K     A           F++ ++L K    A        + +    +      
Sbjct: 87  SFGNTIKKQSDIAYAYAKGVRLYAFDSEAELEKLALAAPGSRVFCRILMTCDGAEWPLSR 146

Query: 134 ADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFI 190
                         K        +  G+ FH   +      +   +      F       
Sbjct: 147 KFGCEIDMAKDLLVK--ARDLGLDPYGVSFHVGSQQTDLKQWDIAVGKAAMLFSALDAAG 204

Query: 191 TQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTL 244
             +  ++LGGG     +          +     + +        + +EPG ++V +   L
Sbjct: 205 IDLRMVNLGGGFPARYRKEVDGIERYAEAVMDAMTKHFGNNIPAMIIEPGRSLVGDAGIL 264

Query: 245 NTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPNTGPYTAMVCGRS 296
            T V+ IS            ++          + + + Y+   T          ++ G +
Sbjct: 265 ETEVVLISRKGYEDDTRWVYLDVGKFGGLAETMDEAIKYR-IVTGRDGEDTAPVILAGPT 323

Query: 297 CLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337
           C + DI  E   +     +K+GD++       Y  +     FNG 
Sbjct: 324 CDSADILYEKAGYEMPVSLKVGDKVRILSTGAYTTSYSAVNFNGF 368


>gi|330892496|gb|EGH25157.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. mori str.
           301020]
          Length = 375

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 59/352 (16%), Positives = 116/352 (32%), Gaps = 31/352 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            ++ D   L  ++   +     A V+L  A+K  +   M +TL   + G   SS  E+  
Sbjct: 25  AFVYDLDALQQHVTDVMAALPAA-VELYYAIKANSEALMLETLAPLVSGFEISSGGEIER 83

Query: 66  GHEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQK--LHKKIGLR 121
                  + + ++     D ++ + L N    I   +++++ + +  A++    + + LR
Sbjct: 84  VMACPTRKPYVFSGPGKLDSDLRSALLNKVEAIHLESLNEIARLQHLAEETGRVQPVFLR 143

Query: 122 INPSVSYSKFILADPNRPFSRLG-------EKCKDKIESEIKNVNGLMFHNNCENKSFLC 174
           INP +  ++          +  G       E  +    +    + G   H      S   
Sbjct: 144 INPQLPAAQSSKLAMAGSATPFGIDETDLAEAIRRVDSASHLTLKGFHVHAMSHQMSVER 203

Query: 175 FSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKY 225
              +L    + +  +        Q+   ++GGGI       + +  +  C+ L++   + 
Sbjct: 204 HEQLLDFYLQRWQEWKALASYPEQLTHFNVGGGIGVDYLNSQQFDWQRLCRYLEKRLGEQ 263

Query: 226 SVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282
                L  EPG  I          VLD   +     +V                +   I+
Sbjct: 264 RDAPILRFEPGRFISAYCGYYAIEVLDSKTSHGEHFLVCRGGTHQFRLPVAQGHDHPVIH 323

Query: 283 PNTGPYT-------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
               P T         V G+ C   D+       K V IGD +       Y 
Sbjct: 324 VPCAPATGASEEQAYTVVGQLCTPKDVLSRRQPLKGVNIGDLLVLPLAGAYG 375


>gi|145606246|ref|XP_365739.2| ornithine decarboxylase [Magnaporthe oryzae 70-15]
 gi|145013956|gb|EDJ98597.1| ornithine decarboxylase [Magnaporthe oryzae 70-15]
          Length = 459

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 55/374 (14%), Positives = 106/374 (28%), Gaps = 46/374 (12%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   +        + +    VK   A+KC     +   L +  +G   +S  E+  
Sbjct: 67  FFVADLGHVYR--QHLRWKKNLPRVKPFYAVKCNPDPKVLRLLAELGNGFDCASKTEIKQ 124

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
             +         Y    K       +       + F+   +L K      +    + +  
Sbjct: 125 VLDMGVDPSRIIYAQPCKTNSYVRYVAAEGVRQMTFDNADELYKIAKLFPEAELYLRILT 184

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           + S S  +  L       +  G            NV G+ FH        L F   +++ 
Sbjct: 185 DDSSSLCRLSLKFGASLDATDGLLA--LARELGLNVVGVSFHVGSGASDPLAFLKAVRDA 242

Query: 183 EKEF---GHFITQIEWISLGGGIHFTDKDYPVKD--FCQRLKEFSEKYSVQIYLEPGEAI 237
              F         ++ + +GGG    D    +         + F     V +  EPG   
Sbjct: 243 NFVFEQAAAHGFDMKTLDVGGGFCSDDTFEAMAGVLRDALDEYFPPHRGVSLIAEPGRYF 302

Query: 238 VTNTTTLNTTVLDISE--------------NIKNLVIVDSSVEAHVPDYLLYQESAT--- 280
           V+   T+   V+                      +V V+  +  +    +   +      
Sbjct: 303 VSAAFTIACNVIARRTVEDPNGSVNGSLAAAPSYMVYVNDGLYGNFSSIMFDHQHPVAKV 362

Query: 281 ----------------IYPNTGPYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDV 323
                               +      + G +C   D   E   F + + +GD + FED+
Sbjct: 363 LRSSGNFFYNTTDADSPESPSEGIEYSIWGPTCDGIDRISESVRFSQTIDVGDWLYFEDM 422

Query: 324 AGYNINRKNWFNGI 337
             Y       FNG 
Sbjct: 423 GAYTKCSATRFNGF 436


>gi|312885074|ref|ZP_07744762.1| Vibrioferrin biosynthesis protein PvsE [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309367284|gb|EFP94848.1| Vibrioferrin biosynthesis protein PvsE [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 406

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 63/354 (17%), Positives = 119/354 (33%), Gaps = 34/354 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV-M 64
            YL D   L  ++    ++     V+L  A K   +  +  TL  Y+DG  ++S  E+  
Sbjct: 28  AYLYDLTALEQHIKQMKHVLPK-NVELFYAAKANPSEPILRTLAPYVDGFEAASGGELVH 86

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLS-NCDTIIFNTVSQLNKFKDKAQKLHK--KIGLR 121
           L  ++               E++  +  N D I   ++++L +     + L +   I LR
Sbjct: 87  LHQQQLNMPLIFGGPGKMPSELEQAIELNIDAIHVESLTELQRIATLTETLDRSATIFLR 146

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENKSFLC 174
           +N  +              +  G    +   +          ++ G  FH          
Sbjct: 147 MNIDIGDITLSKLAMGGKPTPFGLDESELSNALTLLRDFPKVHLKGFHFHLMSHQLDVDR 206

Query: 175 FSAMLKNIEKEFGHFITQIE----WISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYS 226
             A+++   +    +  + +     I+LGGG+        + +P  +FC +L+    K  
Sbjct: 207 HLALMQRYFQVVKDWQARFQLDELMINLGGGMGINYQNNEQHFPWTEFCDKLEFLIAKEQ 266

Query: 227 ---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESAT-I 281
               ++  E G  I          VLDI +N+    ++      H         +    I
Sbjct: 267 VQDWKLRFECGRYISAPCGYYVMEVLDIKKNLGENFVIARGGTHHFRTPAAQSHDHPFAI 326

Query: 282 YPNTGPYT---------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
            P+  P T         A   G+ C   D+         + IGD + F     Y
Sbjct: 327 LPSNKPKTISLPLAQSQATFVGQLCTPKDVLARNQNIDHLDIGDYVVFTHAGAY 380


>gi|303314889|ref|XP_003067453.1| ornithine decarboxylase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240107121|gb|EER25308.1| ornithine decarboxylase, putative [Coccidioides posadasii C735
           delta SOWgp]
          Length = 490

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 50/378 (13%), Positives = 110/378 (29%), Gaps = 38/378 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D+  + N L       K + V+   A+KC         L ++  G   +S  E+  
Sbjct: 40  FFVADEPFIHNQLKLWES--KLSDVEPFYAVKCNDNLRFLRILAEHGLGFDCASQSEMQR 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-QKLHKKIGLRIN 123
                       Y   +K  +          +        ++ +  A    + ++ LR+ 
Sbjct: 98  ILNLGVEPHRILYAAPFKSEDGILYAKQHG-VTQTMFDTEDELRKLADYFPNAELYLRLW 156

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
                S+  L           ++     +     V GL FH       F  +   +    
Sbjct: 157 ADDPSSRVRLGSKYGVQLPQAKELLVLAQELNMKVIGLCFHVGSSAADFDAYRQAIAFTR 216

Query: 184 KEF-------GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS-EKYSVQIYLEPGE 235
           + +             I  I +GGG    + +       + ++++  ++  ++   EPG 
Sbjct: 217 EVYDFNQSLREDQRHPIRTIDIGGGFSLGNFESAATVIRKSIRQYFGDEKHLRWVAEPGR 276

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSV-----EAHVPDYLLYQE------------- 277
                   L   VL           + +       + H+ D + +               
Sbjct: 277 YFAEEAFYLVCRVLGTRPRACLGNGIGADEKLPVGDIHINDGIYHNFLNALTEQVVPQPI 336

Query: 278 ------SATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFEDVAGYNINR 330
                 +  +          V G++C + D         +  K+GD + F  +  Y    
Sbjct: 337 LLNCTGTPYVSAADNGDPYTVWGQTCDSFDKIATNCVLPRRAKVGDWLCFPFMGAYTHVT 396

Query: 331 KNWFNGINMPTIAVKNVD 348
            + FNG       +   +
Sbjct: 397 GSDFNGFPRLKKIIWISN 414


>gi|254293834|ref|YP_003059857.1| Orn/DAP/Arg decarboxylase 2 [Hirschia baltica ATCC 49814]
 gi|254042365|gb|ACT59160.1| Orn/DAP/Arg decarboxylase 2 [Hirschia baltica ATCC 49814]
          Length = 415

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 51/356 (14%), Positives = 112/356 (31%), Gaps = 24/356 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP+ +++   +  N          A      A+K      +   LN+       +S+ E
Sbjct: 57  PTPHLVVELDVVERNYKALKTALPRANH--HYAIKANPHPDLLKRLNKLGCYFECASIQE 114

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + +        +   Y            A     +  +F+   +L+K    A        
Sbjct: 115 IDMCLAAGAQAKDILYGNPLKKASEIKAAYQRGVEQYVFDAALELDKIITHAPGSKVICR 174

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +  + S + S   +     P   L    K    S     +G+ FH   +  +   ++A +
Sbjct: 175 ITTDGSGAVSPLSIKFGCPPEKALDWLLK--ANSSGLIAHGISFHTGSQQLNPASWNAPI 232

Query: 180 KNIEKEFGHFITQ----IEWISLGGGIHFTDKD------YPVKDFCQRLKEFSEKYSVQI 229
           +   + F     Q    ++ + +GGG     +                + ++ +  +  I
Sbjct: 233 RAAAEVFEALRKQGVDTMKVLDVGGGFPTNYRKTVPPITTFCDAIAHYVAKYFKTNAPLI 292

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPD--YLLYQESATIYPNTGP 287
           Y EPG  +  +   +   V+ ++ +  N  I    ++            +      + G 
Sbjct: 293 YTEPGRYLPADAGFILAEVVLVAPSHTNPDIRWVYLDIGRYGGLVETQIDYPVYTHHEGE 352

Query: 288 Y-TAMVCGRSCLAGDIFG----EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
               ++ G++C + D+       +H  K +  GDR+       Y        NG  
Sbjct: 353 VGPVIMAGQTCDSNDVIYAEEFRYHLPKALTPGDRVILAHTGVYTTTYSTTLNGFP 408


>gi|167523140|ref|XP_001745907.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163775708|gb|EDQ89331.1| predicted protein [Monosiga brevicollis MX1]
          Length = 495

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 44/384 (11%), Positives = 99/384 (25%), Gaps = 55/384 (14%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           ++L+D   +          ++   V    A+KC     +   L         +S  E+  
Sbjct: 67  FFLVDLGSVYRQHHLFK--QELPDVTPFYAVKCNPDPMILRCLASLGANFDCASRAEIEA 124

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                   E   Y    K               + F++  +L K      +    + +  
Sbjct: 125 VLGIGVTPERIIYANPCKPASHIRYAKEVGVTLMTFDSAEELRKIAGIYPEASVVLRILA 184

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           + S S  +  L        +      +  ++   N+ G+ FH          +   +   
Sbjct: 185 DDSKSACRLGLKFGAVVG-KQTTSLIEACKATGLNLAGVSFHVGSGCTDAAVYDDAIAKA 243

Query: 183 EKEFGH---FITQIEWISLGGGIH-----FTDKDYPVKDFCQRLKEFSEKYSVQI----- 229
            + F     +      + +GGG               +     +++    +   +     
Sbjct: 244 RQVFRDAEAYGFAPTVLDVGGGFPGEAVAGRTPKVRFESIANSIRDAVANHFSDVSGLRL 303

Query: 230 YLEPGEAIVTNTTTLNTTVLD---ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT- 285
             EPG     N  TL  +V+    ++      +    +    + D    +          
Sbjct: 304 IAEPGRYYAANAMTLALSVIAKRVVAPETSGDISPSETTFQGMLDADELETIPAGAMVNY 363

Query: 286 --------------------------------GPYTAMVCGRSCLAGDIFGEFHFEKPVK 313
                                             Y + V G +C + D   +      + 
Sbjct: 364 FVNDGVYGSFNCIIFDHADVELQPLNYKKATGKKYNSTVWGPTCDSIDCVAKSCQLPDLD 423

Query: 314 IGDRISFEDVAGYNINRKNWFNGI 337
           +G+ +    +  Y     + FNG 
Sbjct: 424 VGEWLYVAGMGAYTGAAASTFNGF 447


>gi|91794425|ref|YP_564076.1| diaminopimelate decarboxylase [Shewanella denitrificans OS217]
 gi|91716427|gb|ABE56353.1| ornithine decarboxylase [Shewanella denitrificans OS217]
          Length = 391

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 56/359 (15%), Positives = 116/359 (32%), Gaps = 26/359 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP+ +ID + +    D  +     A   +  A+K   A  +   L         +S+YE
Sbjct: 29  PTPFVVIDTKIIAKQYDDMVKNFPYAN--VYYAVKANPAKEVLTLLRDKGSNFDIASIYE 86

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           + +        +  +Y    K              +F + S+ +  +  A++        
Sbjct: 87  LEMVTSIGVSADRISYGNTIKKRVDVRSFYEQGVRMFASDSEAD-LRMIAEEAPGSKIYV 145

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV--NGLMFHNNCENKSFLCFSAML 179
              +            +   +        + +    +  +G+ FH   + +    + + +
Sbjct: 146 RILTEGTHTADWPLSRKFGCQNEMAYDLLVLARELGLVPHGISFHVGSQQRDIGAWDSAI 205

Query: 180 KNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSVQI 229
             ++  +         Q++ I+LGGG      D         +     LKE       ++
Sbjct: 206 GKVKGIYDRLKEEHGIQLKMINLGGGFPANYIDKTNELATYAEQITHFLKEDFGDDLPEV 265

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATIYPN 284
            LEPG ++++N   L + V+ IS          +          +       +       
Sbjct: 266 ILEPGRSLLSNAGVLVSEVVLISRKSNTALERWVFTDVGKFSGLIETTDEAIKFPIYTDR 325

Query: 285 TGP-YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338
           TG     ++ G +C + DI  E   +   K + IGDR+ +     Y        FNG  
Sbjct: 326 TGELDKCVIAGPTCDSADIMYEHYSYGLPKDLAIGDRMFWLTAGAYTTTYSAVCFNGFP 384


>gi|114564566|ref|YP_752080.1| diaminopimelate decarboxylase [Shewanella frigidimarina NCIMB 400]
 gi|114335859|gb|ABI73241.1| ornithine decarboxylase [Shewanella frigidimarina NCIMB 400]
          Length = 391

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 56/359 (15%), Positives = 119/359 (33%), Gaps = 26/359 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP+ +ID Q +    D  +     A   +  A+K   A  +   L         +S+YE
Sbjct: 29  PTPFVVIDTQIVAKQYDDMVNNFPFAN--IYYAVKANPAKEILTLLRDKGSNFDIASIYE 86

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           + +        +  +Y    K              +F + S+ +  +  A++        
Sbjct: 87  LEMVTSIGVSADRISYGNTIKKRVDVRSFFEQGVRMFASDSEAD-LRMIAEEAPGSKVYL 145

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV--NGLMFHNNCENKSFLCFSAML 179
              +            +   +        + ++   +  +G+ FH   + +    + + +
Sbjct: 146 RILTEGTHTADWPLSRKFGCQNEMAYDLLVLAKELGLQPHGISFHVGSQQRDIGAWDSAI 205

Query: 180 KNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVK--DFCQRLKEFSEKYS----VQI 229
             ++  +          ++ I+LGGG      D   +   + Q++K F E+       +I
Sbjct: 206 GKVKSIYDRLKEEHGIVLKMINLGGGFPANYMDKTNELGVYAQQIKHFLEEDFGDELPEI 265

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATIYPN 284
            LEPG ++++N   L + V+ IS          +          +       +       
Sbjct: 266 ILEPGRSLLSNAGVLVSEVVLISRKSNTALERWVFTDVGKFSGLIETMDEAIKFPIYTER 325

Query: 285 TGP-YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338
            G     ++ G +C + DI  E   +     + IGDR+ +     Y        FNG  
Sbjct: 326 KGELDKCVIAGPTCDSADIMYEHYSYGLPVDLAIGDRMYWLTAGAYTTTYSAVCFNGFP 384


>gi|99078088|ref|YP_611346.1| ornithine decarboxylase [Ruegeria sp. TM1040]
 gi|99035226|gb|ABF62084.1| ornithine decarboxylase [Ruegeria sp. TM1040]
          Length = 390

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 52/364 (14%), Positives = 114/364 (31%), Gaps = 28/364 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  +ID + +                ++  A+K   A  +   L        ++S  E+ 
Sbjct: 32  PTLVIDSEAVARQYMGLARGLGR--ARIHYAVKANPAPEILRRLCALGSNFDAASRAEIE 89

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +            +    K     A            + V +L K  + A   H  I + 
Sbjct: 90  MCRAAGASAARITFGNTIKKPADIAFAHALGITHFAADAVEELEKLAEHAPGAHVCIRIL 149

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA---M 178
           +  S +           P   +G    D+  +     +GL FH   + +    +      
Sbjct: 150 VEASSADWPLSRKFGCAPDMAVG--LMDRCVALGLVPHGLSFHVGSQTRKPEMWEPILDQ 207

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKYSV--QIYLEP 233
           + ++ +        ++ +++GGG     +     P     + +K  + ++    ++  EP
Sbjct: 208 VADVWQAARAAGHDLKLLNIGGGFPAGYRDAVMAPQDYASEVMKRVNARFPDAAEVMAEP 267

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPNT 285
           G  +V     +   V+ +S    + +           S +   + + + Y +  T   + 
Sbjct: 268 GRGLVAEAGAIAAEVMLVSRKHDSDLHRWVYLDIGKFSGLAETMDEAIRY-KITTDRDHE 326

Query: 286 GPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPT 341
                ++ G SC + D+  E         +  GDR+       Y     +  FNG     
Sbjct: 327 TMGACVLAGPSCDSADVLYEKQPVQLPLGLTSGDRVVIHSCGAYTTTYASIGFNGFPPLD 386

Query: 342 IAVK 345
           + V 
Sbjct: 387 VVVL 390


>gi|320587267|gb|EFW99747.1| ornithine decarboxylase [Grosmannia clavigera kw1407]
          Length = 467

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 58/380 (15%), Positives = 106/380 (27%), Gaps = 52/380 (13%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++        +      V+   A+KC     +   L    +G   +S  E+  
Sbjct: 68  FFVADLGEVYR--QQLRWKMNLPRVRPFYAVKCNPDPKVLQLLAGLGNGFDCASKAEIEQ 125

Query: 66  GH-EKFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                       Y    K       +       + F+   +L K          ++ LRI
Sbjct: 126 VLNMGVDPSRIIYAQPCKTNSYVRYVAAHGVRQMTFDNADELRKIARL--FPDAELFLRI 183

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
               S S   L+          +           NV G+ FH          F   +++ 
Sbjct: 184 LTDDSSSLCRLSLKFGASLDTTDSLLALARELGLNVVGVSFHVGSGASDPSAFLKAVQDA 243

Query: 183 EKEF---GHFITQIEWISLGGGIHFTDKDYPVKD--FCQRLKEFSEKYSVQIYLEPGEAI 237
              F     +   ++ + +GGG         + +       + F     V I  EPG   
Sbjct: 244 HSVFLQAAEYGYSLKTLDVGGGFCSDATFEAMAEVLRNALDEYFPAHRGVSIIAEPGRYF 303

Query: 238 VTNTTTLNTTVLDISENIKNLVIVD-------------SSVEAHVPDYLLYQESATIYPN 284
           V++  T+   V+                           +   +V D L    S+ ++ +
Sbjct: 304 VSSAFTIACNVIARRTVENPPQQQQREDAVDGIVAPADPTYMLYVNDGLYGNFSSIMFDH 363

Query: 285 TGPY--------------------------TAMVCGRSCLAGDIFGEF-HFEKPVKIGDR 317
             P                              + G +C   D   E   F   + +GD 
Sbjct: 364 QHPEAKVLQTGSRFLYDSETANAVAPTSGLEYSIWGPTCDGIDRITESIRFGHTLDVGDW 423

Query: 318 ISFEDVAGYNINRKNWFNGI 337
           + FED+  Y       FNG 
Sbjct: 424 LYFEDMGAYTRCSATRFNGF 443


>gi|127514320|ref|YP_001095517.1| ornithine decarboxylase [Shewanella loihica PV-4]
 gi|126639615|gb|ABO25258.1| ornithine decarboxylase [Shewanella loihica PV-4]
          Length = 391

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 54/359 (15%), Positives = 119/359 (33%), Gaps = 26/359 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP+ +ID + +    D  ++        +  A+K   A  +   L         +S+YE
Sbjct: 29  PTPFVVIDTKIIAKQYDDMVHNFPY--ASIYYAVKANPAKEVLTLLRDRGANFDIASIYE 86

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           + +  +     +  +Y    K  +           ++ + S+ +  +  A++        
Sbjct: 87  LDMVSDIGVTPDRVSYGNTIKKRKDVRAFYERGVRMYASDSEAD-LRMIAEEAPGSRVYV 145

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAML 179
              +            +   +     +  + ++   +   G+ FH   + +    + + +
Sbjct: 146 RILTEGTHTADWPLSRKFGCQNEMAFELLVLAKTLGLEPYGISFHVGSQQRDIGAWDSAI 205

Query: 180 KNIEKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSVQI 229
             ++  F         +++ I+LGGG      D         +     LKE       QI
Sbjct: 206 AKVKSIFERLREEHGIELKMINLGGGFPANYLDKTNELGTYAEQITHFLKEDFGDQLPQI 265

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATIYPN 284
            LEPG ++++N   L + V+ IS+  +      +          +       +       
Sbjct: 266 ILEPGRSLLSNAGVLVSEVVLISKKSQTALERWVFTDVGKFSGLIETMDEAIKFPIYTER 325

Query: 285 TGP-YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338
            G     ++ G +C + DI  E   +     + IGDR+ +     Y        FNG  
Sbjct: 326 QGELDRCVIAGPTCDSADIMYEHYSYGLPLDLAIGDRMYWLTAGAYTTTYSAVCFNGFP 384


>gi|328469448|gb|EGF40394.1| vibrioferrin decarboxylase protein PvsE [Vibrio parahaemolyticus
           10329]
          Length = 400

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 60/354 (16%), Positives = 116/354 (32%), Gaps = 34/354 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE-VM 64
            YL D   L  ++    ++     V+L  A K   +  +  TL  Y+DG  ++S  E   
Sbjct: 28  AYLYDLNALEEHIKQLRHVLPK-NVELFYAAKANPSGPILKTLAPYVDGFEAASGGELAH 86

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLHKK--IGLR 121
           L  ++               E+   +    D I   ++++L +     ++L++   I LR
Sbjct: 87  LHQQQLDKPLIFGGPGKMPSELQQAIELDVDAIHVESLTELKRIGALTERLNRPASIFLR 146

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNCENKSFLC 174
           +N  +              +  G    +   + +        ++ G  FH          
Sbjct: 147 MNIDIGDITLSKLAMGGKPTPFGLDESELSNALMLLRDFPQVSLKGFHFHLMSHQLDVER 206

Query: 175 FSAMLKNIEKEFGHFITQIE----WISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYS 226
             A+++   +    +  + E     I+LGGG+        + +P  +FC +L+    K  
Sbjct: 207 HLALMQRYFQVVKTWQQEFELGELMINLGGGMGINYQNPEQHFPWMEFCDKLEFLIAKEQ 266

Query: 227 ---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282
                +  E G  I          VLDI +N+    ++      H         +   + 
Sbjct: 267 VQDWTLRFECGRFITAACGYYVMEVLDIKQNLGENFVIARGGTHHFRTPAAQSHDHPFVI 326

Query: 283 PNTGPYT----------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
             +  +           A   G+ C   D+         V IGD + F     Y
Sbjct: 327 LKSEQHHEVSHPIQHAQATFVGQLCTPKDVLARNQHVAHVNIGDYVVFTLAGAY 380


>gi|329732404|gb|EGG68754.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein
           [Staphylococcus aureus subsp. aureus 21193]
          Length = 400

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 54/381 (14%), Positives = 106/381 (27%), Gaps = 36/381 (9%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66
           Y+ D   L ++L         +  ++  A+K  +   + DT++QY++G   +S  E+  G
Sbjct: 21  YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79

Query: 67  HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                     +       +    AV      I   ++ +L +     +   K   + +  
Sbjct: 80  LAFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRV 139

Query: 125 S-VSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE----NKSF 172
           +                ++ G          +  +     +++G  FH+       N   
Sbjct: 140 NLAGPFPNATLHMAGRPTQFGISEDEVDDVIEAALVMPNIHLDGFHFHSISNNLDSNLHV 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKDFCQRLKEFSEKY 225
                  K  +         ++ I+LGGGI           +     +  + L    E  
Sbjct: 200 DVVKLYFKKAKSWSEKHRFPLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQEME 259

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284
            V +  E G  IV +     T VLDI +       +                        
Sbjct: 260 DVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFEIYR 319

Query: 285 TGPYTA------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                              + G+ C   D+F        +  GD I F+    Y  +  +
Sbjct: 320 YKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSISH 379

Query: 333 W-FNGINMPTIAVKNVDGTIK 352
             F     P           +
Sbjct: 380 HDFLSHPHPEFIYLTQTKEDE 400


>gi|57652470|ref|YP_185011.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp.
           aureus COL]
 gi|87160623|ref|YP_492842.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88193897|ref|YP_498682.1| hypothetical protein SAOUHSC_00082 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|151220279|ref|YP_001331102.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|161508391|ref|YP_001574050.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|258452269|ref|ZP_05700283.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus A5948]
 gi|262049760|ref|ZP_06022625.1| hypothetical protein SAD30_1859 [Staphylococcus aureus D30]
 gi|282923784|ref|ZP_06331461.1| diaminopimelate decarboxylase [Staphylococcus aureus A9765]
 gi|284023133|ref|ZP_06377531.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp.
           aureus 132]
 gi|32441994|gb|AAP82070.1| SbnH [Staphylococcus aureus]
 gi|57286656|gb|AAW38750.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp.
           aureus COL]
 gi|87126597|gb|ABD21111.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|87201455|gb|ABD29265.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|150373079|dbj|BAF66339.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|160367200|gb|ABX28171.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|257860106|gb|EEV82940.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus A5948]
 gi|259162150|gb|EEW46727.1| hypothetical protein SAD30_1859 [Staphylococcus aureus D30]
 gi|282593026|gb|EFB98027.1| diaminopimelate decarboxylase [Staphylococcus aureus A9765]
 gi|315196461|gb|EFU26811.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320139543|gb|EFW31414.1| pyridoxal-dependent decarboxylase, sheet domain protein
           [Staphylococcus aureus subsp. aureus MRSA131]
 gi|320142140|gb|EFW33959.1| pyridoxal-dependent decarboxylase, sheet domain protein
           [Staphylococcus aureus subsp. aureus MRSA177]
 gi|329731721|gb|EGG68081.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein
           [Staphylococcus aureus subsp. aureus 21189]
          Length = 400

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 54/381 (14%), Positives = 106/381 (27%), Gaps = 36/381 (9%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66
           Y+ D   L ++L         +  ++  A+K  +   + DT++QY++G   +S  E+  G
Sbjct: 21  YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERKILDTISQYVEGFEVASQGEIAKG 79

Query: 67  HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                     +       +    AV      I   ++ +L +     +   K   + +  
Sbjct: 80  LAFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRV 139

Query: 125 S-VSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE----NKSF 172
           +                ++ G          +  +     +++G  FH+       N   
Sbjct: 140 NLAGPFPNATLHMAGRPTQFGISEDEVDDVIEAALAMPKIHLDGFHFHSISNNLDSNLHV 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKDFCQRLKEFSEKY 225
                  K  +         ++ I+LGGGI           +     +  + L    E  
Sbjct: 200 DVVKLYFKKAKAWSEKHRFPLKHINLGGGIGVNYADLTNQFEWDNFVERFKTLIVEQEME 259

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284
            V +  E G  IV +     T VLDI +       +                        
Sbjct: 260 DVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFDIYR 319

Query: 285 TGPYTA------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                              + G+ C   D+F        +  GD I F+    Y  +  +
Sbjct: 320 YKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSISH 379

Query: 333 W-FNGINMPTIAVKNVDGTIK 352
             F     P           +
Sbjct: 380 HDFLSHPHPEFIYLTQTKEDE 400


>gi|149184666|ref|ZP_01862984.1| ornithine/diaminopimelate/arginine decarboxylase,family 2
           [Erythrobacter sp. SD-21]
 gi|148831986|gb|EDL50419.1| ornithine/diaminopimelate/arginine decarboxylase,family 2
           [Erythrobacter sp. SD-21]
          Length = 408

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 51/375 (13%), Positives = 110/375 (29%), Gaps = 34/375 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP ++  +  +   +        N  +++  A+K  +   + + L + +DG   +S  E+
Sbjct: 35  TPLFVYSQTMIDERVARLRAAMPNR-LRINYAIKANSFAPLLEHLARLVDGLDIASGGEL 93

Query: 64  MLG-HEKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            +       G   ++     +D E++A +    T+   + ++  +     +KL     L 
Sbjct: 94  AMVETAGVAGARVSFAGPGKRDAELEAAIRAGVTLNLESENEARRALAIGEKLGVTPRLA 153

Query: 122 INPSVS-YSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKS--- 171
           I  +     K             G   +        I        GL      +      
Sbjct: 154 IRVNPDFELKGSGMKMGGGAKPFGVDAERVPALAREIIGAGCEFRGLHIFPGSQALDADA 213

Query: 172 -FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI- 229
                ++ L    +        +  +++GGG      +       +R+    E+    + 
Sbjct: 214 VIETQASTLDLAHRIASEAGLDLPKLNMGGGYGIPYFNGDTPLDIERVGAALEERFANLP 273

Query: 230 --------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY--------- 272
                   ++E G  IV       T +LD  E+     +V      H             
Sbjct: 274 DTLAGAELFIELGRYIVGEAGVYLTRILDRKESHGETYLVTDGGLHHQLAASGNFGTVVR 333

Query: 273 -LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                  A+ +       A V G  C   D   +       ++GD ++      Y  +  
Sbjct: 334 RNYPLAIASRFDAEPSEVANVVGCLCTPLDRLADKAQLPRAEVGDLVAVFCAGAYGASAS 393

Query: 332 -NWFNGINMPTIAVK 345
            + F G       + 
Sbjct: 394 PSAFLGQGPAEEMLV 408


>gi|50420693|ref|XP_458883.1| DEHA2D09614p [Debaryomyces hansenii CBS767]
 gi|49654550|emb|CAG87035.1| DEHA2D09614p [Debaryomyces hansenii]
          Length = 450

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 56/376 (14%), Positives = 110/376 (29%), Gaps = 50/376 (13%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           ++++D  ++  +            V    A+KC     +   L Q       +S  E+ +
Sbjct: 64  FFVVDLGEVYRSYMKWKETL--PNVHAHYAVKCNTDLSVIKLLGQLGANFDCASKNEIDI 121

Query: 66  GHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                F  +   Y    K       A  SN +    +   +L K      +    + +  
Sbjct: 122 VLGLGFSPDRIVYANPCKTNSYIRYANDSNVNLTTVDNPQELYKLHKYHPECGILLRIAT 181

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           +   +  +          + + E           NV G+ FH     K F      +++ 
Sbjct: 182 DDETAQCRLSTKFGCSVDTAVNELLP-LAAKLGLNVRGVAFHVGSGAKDFDSIHEAVRDS 240

Query: 183 EKEFGH------FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY---------SV 227
              F        +   +  + +GGG     +          +K   EKY         ++
Sbjct: 241 RFIFDKGIDEYGYGKTMNILDIGGGF----EMETFDKSSAMVKLSLEKYFSSDYCSSQNI 296

Query: 228 QIYLEPGEAIVTNTTTLNTTVL-------------DISENIKNLVIVDSSVEAHVPDYLL 274
           +   EPG  +V+   TL   ++             DI   +     V  ++   + D+  
Sbjct: 297 KFIAEPGRLMVSKAFTLAAHIIARRDLPRSLKESNDIEAMLYINDGVYGNMNCILFDHQN 356

Query: 275 YQES-----------ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFE-KPVKIGDRISFED 322
                            +   T  +   + G +C   D           V++GD + F D
Sbjct: 357 PVPHVLTHKNSLYYNEQVSDRTTKHQFSIWGPTCDGLDCVSNRSALYHNVEVGDWLYFPD 416

Query: 323 VAGYNINRKNWFNGIN 338
           +  Y       FNG  
Sbjct: 417 LGAYTSAATTSFNGFK 432


>gi|253730474|ref|ZP_04864639.1| diaminopimelate decarboxylase protein [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|253725804|gb|EES94533.1| diaminopimelate decarboxylase protein [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
          Length = 400

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 54/381 (14%), Positives = 106/381 (27%), Gaps = 36/381 (9%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66
           Y+ D   L ++L         +  ++  A+K  +   + DT++QY++G   +S  E+  G
Sbjct: 21  YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79

Query: 67  HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                     +       +    AV      I   ++ +L +     +   K   + +  
Sbjct: 80  LAFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRV 139

Query: 125 S-VSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE----NKSF 172
           +                ++ G          +  +     +++G  FH+       N   
Sbjct: 140 NLAGPFPNATLHMAGRPTQFGISEDEVDDVIEAALAMPNIHLDGFHFHSISNNLDSNLHV 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKDFCQRLKEFSEKY 225
                  K  +         ++ I+LGGGI           +     +  + L    E  
Sbjct: 200 DVVKLYFKKAKSWSEKHRFPLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQEME 259

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284
            V +  E G  IV +     T VLDI +       +                        
Sbjct: 260 DVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFEIYR 319

Query: 285 TGPYTA------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                              + G+ C   D+F        +  GD I F+    Y  +  +
Sbjct: 320 YKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSISH 379

Query: 333 W-FNGINMPTIAVKNVDGTIK 352
             F     P           +
Sbjct: 380 HDFLSHPHPEFIYLTQTKEDE 400


>gi|15923113|ref|NP_370647.1| diaminopimelate decarboxylase protein [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|15925827|ref|NP_373360.1| hypothetical protein SA0119 [Staphylococcus aureus subsp. aureus
           N315]
 gi|148266550|ref|YP_001245493.1| Orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus subsp. aureus
           JH9]
 gi|150392588|ref|YP_001315263.1| Orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus subsp. aureus
           JH1]
 gi|156978453|ref|YP_001440712.1| hypothetical protein SAHV_0122 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253316262|ref|ZP_04839475.1| hypothetical protein SauraC_09001 [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|255004921|ref|ZP_05143522.2| hypothetical protein SauraM_00590 [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257794473|ref|ZP_05643452.1| orn/DAP/Arg decarboxylase [Staphylococcus aureus A9781]
 gi|258407567|ref|ZP_05680703.1| orn/DAP/Arg decarboxylase [Staphylococcus aureus A9763]
 gi|258419840|ref|ZP_05682802.1| orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus A9719]
 gi|258438645|ref|ZP_05689868.1| diaminopimelate decarboxylase [Staphylococcus aureus A9299]
 gi|258443897|ref|ZP_05692235.1| diaminopimelate decarboxylase [Staphylococcus aureus A8115]
 gi|258445097|ref|ZP_05693334.1| orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus A6300]
 gi|258447701|ref|ZP_05695840.1| orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus A6224]
 gi|258455675|ref|ZP_05703630.1| orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus A5937]
 gi|269201775|ref|YP_003281044.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp.
           aureus ED98]
 gi|282894345|ref|ZP_06302575.1| siderophore staphylobactin biosynthesis protein SbnH
           [Staphylococcus aureus A8117]
 gi|282928375|ref|ZP_06335978.1| siderophore staphylobactin biosynthesis protein SbnH
           [Staphylococcus aureus A10102]
 gi|295405394|ref|ZP_06815204.1| siderophore staphylobactin biosynthesis protein SbnH
           [Staphylococcus aureus A8819]
 gi|296275942|ref|ZP_06858449.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           MR1]
 gi|297244730|ref|ZP_06928610.1| siderophore staphylobactin biosynthesis protein SbnH
           [Staphylococcus aureus A8796]
 gi|13700039|dbj|BAB41338.1| putative diaminopimelate decarboxylase [Staphylococcus aureus
           subsp. aureus N315]
 gi|14245890|dbj|BAB56285.1| probable diaminopimelate decarboxylase protein [Staphylococcus
           aureus subsp. aureus Mu50]
 gi|147739619|gb|ABQ47917.1| Orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus subsp. aureus
           JH9]
 gi|149945040|gb|ABR50976.1| Orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus subsp. aureus
           JH1]
 gi|156720588|dbj|BAF77005.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
 gi|257788445|gb|EEV26785.1| orn/DAP/Arg decarboxylase [Staphylococcus aureus A9781]
 gi|257840792|gb|EEV65249.1| orn/DAP/Arg decarboxylase [Staphylococcus aureus A9763]
 gi|257844122|gb|EEV68509.1| orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus A9719]
 gi|257848204|gb|EEV72196.1| diaminopimelate decarboxylase [Staphylococcus aureus A9299]
 gi|257850781|gb|EEV74725.1| diaminopimelate decarboxylase [Staphylococcus aureus A8115]
 gi|257856005|gb|EEV78924.1| orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus A6300]
 gi|257858983|gb|EEV81847.1| orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus A6224]
 gi|257861887|gb|EEV84660.1| orn/DAP/Arg decarboxylase 2 [Staphylococcus aureus A5937]
 gi|262074065|gb|ACY10038.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp.
           aureus ED98]
 gi|282589959|gb|EFB95042.1| siderophore staphylobactin biosynthesis protein SbnH
           [Staphylococcus aureus A10102]
 gi|282763390|gb|EFC03520.1| siderophore staphylobactin biosynthesis protein SbnH
           [Staphylococcus aureus A8117]
 gi|285815848|gb|ADC36335.1| Siderophore staphylobactin biosynthesis protein SbnH
           [Staphylococcus aureus 04-02981]
 gi|294969469|gb|EFG45488.1| siderophore staphylobactin biosynthesis protein SbnH
           [Staphylococcus aureus A8819]
 gi|297178247|gb|EFH37494.1| siderophore staphylobactin biosynthesis protein SbnH
           [Staphylococcus aureus A8796]
 gi|312828640|emb|CBX33482.1| pyridoxal-dependent decarboxylase, C-terminal sheet domain protein
           [Staphylococcus aureus subsp. aureus ECT-R 2]
 gi|315129103|gb|EFT85099.1| hypothetical protein CGSSa03_13832 [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|329725668|gb|EGG62147.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein
           [Staphylococcus aureus subsp. aureus 21172]
          Length = 400

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 54/381 (14%), Positives = 106/381 (27%), Gaps = 36/381 (9%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66
           Y+ D   L ++L         +  ++  A+K  +   + DT++QY++G   +S  E+  G
Sbjct: 21  YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79

Query: 67  HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                     +       +    AV      I   ++ +L +     +   K   + +  
Sbjct: 80  LAFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRV 139

Query: 125 S-VSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE----NKSF 172
           +                ++ G          +  +     +++G  FH+       N   
Sbjct: 140 NLAGPFPNATLHMAGRPTQFGISEDEVDDVIEAALVMPNIHLDGFHFHSISNNLDSNLHV 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKDFCQRLKEFSEKY 225
                  K  +         ++ I+LGGGI           +     +  + L    E  
Sbjct: 200 DVVKLYFKKAKSWSEKHRFPLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQEME 259

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284
            V +  E G  IV +     T VLDI +       +                        
Sbjct: 260 DVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFEIYR 319

Query: 285 TGPYTA------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                              + G+ C   D+F        +  GD I F+    Y  +  +
Sbjct: 320 YKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSISH 379

Query: 333 W-FNGINMPTIAVKNVDGTIK 352
             F     P           +
Sbjct: 380 HDFLSHPHPEFIYLTQTKEDE 400


>gi|253733776|ref|ZP_04867941.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|253728243|gb|EES96972.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           TCH130]
          Length = 400

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 54/381 (14%), Positives = 106/381 (27%), Gaps = 36/381 (9%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66
           Y+ D   L ++L         +  ++  A+K  +   + DT++QY++G   +S  E+  G
Sbjct: 21  YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79

Query: 67  HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                     +       +    AV      I   ++ +L +     +   K   + +  
Sbjct: 80  LAFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRV 139

Query: 125 S-VSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE----NKSF 172
           +                ++ G          +  +     +++G  FH+       N   
Sbjct: 140 NLAGPFPNATLHMAGRPTQFGISEDEVDDVIEAALAMPKIHLDGFHFHSISNNLDSNLHV 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKDFCQRLKEFSEKY 225
                  K  +         ++ I+LGGGI           +     +  + L    E  
Sbjct: 200 DVVKLYFKKAKSWSEKHRFPLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQEME 259

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284
            V +  E G  IV +     T VLDI +       +                        
Sbjct: 260 DVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFEIYR 319

Query: 285 TGPYTA------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                              + G+ C   D+F        +  GD I F+    Y  +  +
Sbjct: 320 YKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSISH 379

Query: 333 W-FNGINMPTIAVKNVDGTIK 352
             F     P           +
Sbjct: 380 HDFLSHPHPEFIYLTQTKEDE 400


>gi|320007593|gb|ADW02443.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces flavogriseus ATCC 33331]
          Length = 412

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 56/397 (14%), Positives = 102/397 (25%), Gaps = 40/397 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM---DGTTSSS 59
            TP Y+ D  ++    D       +  V +  A K      +   +            SS
Sbjct: 12  GTPSYVYDLDRVAAARDDLFAALPDE-VAVYYAAKANPHPEILREMRAGGPRVCRAEISS 70

Query: 60  LYEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
           + E+       F G    Y    K  +   +A+     T    +   L    D A +L  
Sbjct: 71  VGELDAVLRAGFAGAEILYTGPGKTTEELAEAMTRGVRTFSVESPGDLRHVGDTAVQLGI 130

Query: 117 KIGLRINPSVSY--------SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE 168
                I  +              + +        L     +  +     + GL F     
Sbjct: 131 TADCLIRVNNPTGAAATSIRMTGVPSQFGFDGETLPGLAAELRDVPGTTIAGLHFFPLSN 190

Query: 169 NKS----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF----CQRLKE 220
            K        F   +                + LGGG          +       + L  
Sbjct: 191 AKDEASLIAEFRHTIATAAALQRELGVDFRIVDLGGGFAAPYAVQGRRPVYGELREALAT 250

Query: 221 FSEKYSVQI-------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL 273
             +++             E G  +V ++ TL T V+++ ++     +V  +         
Sbjct: 251 SLDEHFPGWRDGAPRIACESGRYLVADSGTLLTGVVNVKDSRGTRYVVLDAGINTFGGMS 310

Query: 274 LYQESATIYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
                  +                + G  C  GD+ G          GD ++  +   Y 
Sbjct: 311 GLGRILPVSIEPHESVGTDGVPVQLAGPLCTPGDLLGRQVPLADPAPGDLLTVPNAGSYG 370

Query: 328 INRK-NWFNGINMPTIAVKNVDGTIKAIREF---SYN 360
                  F G   PT  +   D  +   R     +Y 
Sbjct: 371 PTASLLMFLGRPAPTEIIVRGDDLVSVSRIEHTRTYE 407


>gi|307213746|gb|EFN89084.1| Ornithine decarboxylase [Harpegnathos saltator]
          Length = 418

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 56/380 (14%), Positives = 115/380 (30%), Gaps = 29/380 (7%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D  K++   D    I K   V    A+KC     +   L         +S  E+  
Sbjct: 35  FYIADIGKVIAKHDEW--IAKMPRVVPHFAIKCNPDPTVIKVLAALDACFDCASKQEIKQ 92

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             +    G+   +    K           D       S+   FK K      KI +RI  
Sbjct: 93  VMQHGVHGDRIIFAHPAKYPSHIIYAKKVDVKQMTVDSEYELFKIKDFFPEAKIVIRIRC 152

Query: 125 SVSYSKFILADPNRPFSRLG-EKCKDKIESEIKNVNGLMFHNNCENKSFLCF----SAML 179
               +  +L             +     +    N++G  FH          +    +   
Sbjct: 153 DSKNTPVVLGMKFGSDPNEETVRLIQLTKDLGLNLHGFSFHVGSPCVEPEAYGRGIAMCK 212

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--------YSVQIYL 231
           + I          ++ I +GGG         + +F   + E                 Y 
Sbjct: 213 QLITVSKSIGCEGVQLIDIGGGFPGECGT-NIDEFASIINEAIRDVDPAIKVISEPGSYY 271

Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGP 287
                 + +       +L  S+ I+   +      + + + L  +           +   
Sbjct: 272 VASSFTLASYLHSKRVILKGSKMIRMYYMNCGVFNSFIDELLGLRARVPQLLSEPMSNEK 331

Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
           + + + G +  + D+  +      + IGD + ++D+  Y+I   + FNG  +P +     
Sbjct: 332 FCSSLWGPTADSYDLIVKDVLLPELHIGDWLVWKDMGAYSIALASTFNGFPIPVVV---- 387

Query: 348 DGTIKAIREFSYNDYYNNLS 367
                 IR+  + ++    S
Sbjct: 388 ----PIIRKSQWENFEKRPS 403


>gi|50286011|ref|XP_445434.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524739|emb|CAG58345.1| unnamed protein product [Candida glabrata]
          Length = 463

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 56/379 (14%), Positives = 113/379 (29%), Gaps = 33/379 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++           +   V+   A+KC     +   L         +S  E+  
Sbjct: 87  FFVCDLGEIERLYANWWK--ELPRVQPFYAVKCNPDLKIIRKLADLGANFDCASKLEIDK 144

Query: 66  GHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        +    +     +     K K      ++ LRI  
Sbjct: 145 VLSMDVNPERIIYANPCKAASFIRYAATNKVMKSTFDNVEELHKIKKFHPESQLFLRIAT 204

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S ++  L+          +   + I++   N+ G+ FH       F      +++   
Sbjct: 205 DDSTAQCRLSTKYGCEMERVDSLLECIKTLGLNLVGVSFHVGSGASDFSSLYKAVRDARI 264

Query: 185 EFGH-----FITQIEWISLGGGIHFTDKDYPVKDFC-QRLKEFSEKYSVQIYLEPGEAIV 238
            F        + +++ + +GGG                  + F E   V I  EPG  +V
Sbjct: 265 VFDKAVNDYGLPELKTLDVGGGFQLESFKESSAVLRLALDEYFPESSKVDIIAEPGRYLV 324

Query: 239 TNTTTLNTTVLD----------ISENIKNLVIVDSSVEAHVPDY----LLYQESATIYPN 284
            +  TL+  V+           I  N      ++  +  H                   +
Sbjct: 325 ASAFTLSANVIAKRKLNEAESMIYVNDGVYGNMNCILFDHQEPTPRTLWHDNNYHYDDFD 384

Query: 285 TG--------PYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
           +         PY   + G +C   D   + ++ +  + +GD + F  +  Y  +    FN
Sbjct: 385 STSPNPITTCPYKVSMWGPTCDGLDCITKEYYMKHDLVVGDWLYFPRLGAYTSSAATPFN 444

Query: 336 GINMPT-IAVKNVDGTIKA 353
           G +    I   N +     
Sbjct: 445 GFDQTADIIYINSENHDNI 463


>gi|294849057|ref|ZP_06789801.1| siderophore staphylobactin biosynthesis protein SbnH
           [Staphylococcus aureus A9754]
 gi|294823949|gb|EFG40374.1| siderophore staphylobactin biosynthesis protein SbnH
           [Staphylococcus aureus A9754]
          Length = 400

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 54/381 (14%), Positives = 106/381 (27%), Gaps = 36/381 (9%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66
           Y+ D   L ++L         +  ++  A+K  +   + DT++QY++G   +S  E+  G
Sbjct: 21  YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERKILDTISQYVEGFEVASQGEIAKG 79

Query: 67  HEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                     +       +    AV      I   ++ +L +     +   K   + +  
Sbjct: 80  LAFKPANHIIFGGPSKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRV 139

Query: 125 S-VSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE----NKSF 172
           +                ++ G          +  +     +++G  FH+       N   
Sbjct: 140 NLAGPFPNATLHMAGRPTQFGISEDEVDDVIEAALAMPKIHLDGFHFHSISNNLDSNLHV 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKDFCQRLKEFSEKY 225
                  K  +         ++ I+LGGGI           +     +  + L    E  
Sbjct: 200 DVVKLYFKKAKAWSEKHRFPLKHINLGGGIGVNYADLTNQFEWDNFVERFKTLIVEQEME 259

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284
            V +  E G  IV +     T VLDI +       +                        
Sbjct: 260 DVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFDIYR 319

Query: 285 TGPYTA------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                              + G+ C   D+F        +  GD I F+    Y  +  +
Sbjct: 320 YKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSISH 379

Query: 333 W-FNGINMPTIAVKNVDGTIK 352
             F     P           +
Sbjct: 380 HDFLSHPHPEFIYLTQTKEDE 400


>gi|218676892|ref|YP_002395711.1| Vibrioferrin biosynthesis protein PvsE [Vibrio splendidus LGP32]
 gi|218325160|emb|CAV27052.1| Vibrioferrin biosynthesis protein PvsE [Vibrio splendidus LGP32]
          Length = 400

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 60/354 (16%), Positives = 116/354 (32%), Gaps = 34/354 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV-M 64
            YL D   L  ++    ++     V+L  A K   +  +  TL  Y+DG  ++S  E+  
Sbjct: 28  AYLYDLDALELHIKQMRHVLPK-NVELFYAAKANPSTPILRTLAPYVDGFEAASGGELTH 86

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKK--IGLR 121
           L  ++               E++  +      I   ++++L +     QKL++   I LR
Sbjct: 87  LHQQQLNKPLIFGGPGKMLSELEQAIELDVEAIHVESLTELKRIGSLTQKLNRPASIFLR 146

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKSFLC 174
           +N  +              +  G    +   + +         + G  FH          
Sbjct: 147 MNIDIGDITLSKLAMGGKPTPFGLDESELSNALMYLRDFPLIKLKGFHFHLMSHQLDVDR 206

Query: 175 FSAMLKNIEKEFGHFITQIE----WISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYS 226
             A+++   +    +          I+LGGG+        + +P  +FC +L+    K  
Sbjct: 207 HLALMQRYFQVVKEWKKTFSLDELIINLGGGMGINYQNPKQHFPWMEFCDKLEFLISKEH 266

Query: 227 ---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282
               ++  E G  I          VLDI +N+    ++      H         +     
Sbjct: 267 LQDWKLRFECGRYISAPCGYYVMEVLDIKKNLGEHFVIARGGTHHFRTPAAQSHDHPFAI 326

Query: 283 PNTGPY----------TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
             +  +          TA + G+ C   D+         + IGD + F     Y
Sbjct: 327 VKSKQHPTISNPIDQTTATLVGQLCTPKDVLARSQNIAHIDIGDYVVFTLAGAY 380


>gi|91223064|ref|ZP_01258330.1| putative diaminopimelate decarboxylase protein [Vibrio
           alginolyticus 12G01]
 gi|91191877|gb|EAS78140.1| putative diaminopimelate decarboxylase protein [Vibrio
           alginolyticus 12G01]
          Length = 400

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 59/354 (16%), Positives = 116/354 (32%), Gaps = 34/354 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE-VM 64
            Y+ D   L  ++    ++     V+L  A K   +  +  TL  Y+DG  ++S  E   
Sbjct: 28  AYVYDLSALEEHIKQLRHVLPK-NVELFYAAKANPSGPILKTLAPYVDGFEAASGGELAH 86

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLHKK--IGLR 121
           L  ++               E+   +    D I   ++++L +     ++L++   I LR
Sbjct: 87  LHQQQLDKPLIFGGPGKMPSELQQAIELDVDAIHVESLTELQRIGALTERLNRPASIFLR 146

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNCENKSFLC 174
           +N  +              +  G    +   + +        ++ G  FH          
Sbjct: 147 MNIDIGDITLSKLAMGGKPTPFGLDESELSNALMLLRDFPQVSLKGFHFHLMSHQLDVER 206

Query: 175 FSAMLKNIEKEFGHFITQIE----WISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYS 226
             A+++   +    +  + E     I+LGGG+        + +P  +FC +L+    K  
Sbjct: 207 HLALMQRYFQVVKAWQQEFELGELMINLGGGMGINYQNPEQHFPWMEFCDKLEFLIAKEQ 266

Query: 227 ---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282
                +  E G  I          VLDI +N+    ++      H         +   + 
Sbjct: 267 AQDWTLRFECGRFITAACGYYVMEVLDIKQNLGENFVIARGGTHHFRTPAAQSHDHPFVI 326

Query: 283 PNTGPYT----------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
             +  +           A   G+ C   D+         V IGD + F     Y
Sbjct: 327 LKSEQHHEISHPIQHAQATFVGQLCTPKDVLARNQHVTHVDIGDYVVFTLAGAY 380


>gi|23307119|dbj|BAC16548.1| vibrioferrin biosynthesis protein PvsE [Vibrio parahaemolyticus]
          Length = 400

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 61/354 (17%), Positives = 118/354 (33%), Gaps = 34/354 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV-M 64
            YL D   L  ++    ++     VKL  A K   +  + +TL  Y+DG  ++S  E+  
Sbjct: 28  AYLYDLNALEEHIKQLRHVLPK-NVKLFYAAKANPSGPILNTLAPYVDGFEAASGGELTH 86

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLHKK--IGLR 121
           L  ++               E+   +    D I   ++++L +     ++L++   I LR
Sbjct: 87  LHQQQLDKPLIFGGPGKMPSELQQAIELDVDAIHVESLTELQRIGALTERLNRPASIFLR 146

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNCENKSFLC 174
           +N  +              +  G    +   + +        ++ G  FH          
Sbjct: 147 MNIDIGDITLSKLAMGGKPTPFGLDESELSNALMLLRDFPQVSLKGFHFHLMSHQLDVER 206

Query: 175 FSAMLKNIEKEFGHFITQIE----WISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYS 226
             A+++   +    +  + E     I+LGGG+        + +P  +FC +L+    K  
Sbjct: 207 HLALMQRYFQVVKAWQQEFELGELMINLGGGMGINYQNPEQHFPWMEFCDKLEFLIAKEQ 266

Query: 227 ---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282
                +  E G  I          VLDI +N+    ++      H         +   + 
Sbjct: 267 VQDWTLRFECGRFITAACGYYVMEVLDIKQNLGENFVIARGGTHHFRTPAAQSHDHPFVI 326

Query: 283 PNTGPYT----------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
             +  +           A   G+ C   D+         V IGD + F     Y
Sbjct: 327 LKSEQHHDISHPIQHAQATFVGQLCTPKDVLARNQHVAHVDIGDYVVFTLAGAY 380


>gi|148252905|ref|YP_001237490.1| ornithine decarboxylase [Bradyrhizobium sp. BTAi1]
 gi|146405078|gb|ABQ33584.1| ornithine decarboxylase [Bradyrhizobium sp. BTAi1]
          Length = 380

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 45/358 (12%), Positives = 109/358 (30%), Gaps = 29/358 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   + +N             ++  A+K   A  +   L        ++++ E+ 
Sbjct: 21  PCLVVDLDVVRDNYMNFAKAL--PDSRVFYAVKANPAPEVLSLLASLGSSFDTATVAEIE 78

Query: 65  LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +        +  +Y      +     A          +  +++ K    A        + 
Sbjct: 79  MALAAGATPDRISYGNTIKKERDIARAYALGIRLFAVDCAAEVEKISRAAPGAKVFCRIL 138

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
                + +++ L+        +  +  D  +       G+ FH   + +    +   L  
Sbjct: 139 --YDCAGAEWPLSRKFGCDPEMAVEVLDLAKRLGLEPCGISFHVGSQQRKVKAWDRALAM 196

Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIYLE 232
               F         +  +++GGG                +   + L++       +  +E
Sbjct: 197 ASTVFRDCAERGINLSMVNMGGGFPTKYLKDVPPVVQYGRSIFRALRKHFGNQIPETIIE 256

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPN 284
           PG  +V N   + + V+ IS       +    ++          + + + Y         
Sbjct: 257 PGRGMVGNAGIIESEVVLISRKSDEDELRWVYLDIGKFGGLAETMDESIRYAIRTPHDGA 316

Query: 285 TGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338
                 ++ G +C + D+  E   +     + IGD++  E    Y     +  FNGI 
Sbjct: 317 DMT-PCVLAGPTCDSADVMYEKLPYPLPVTLSIGDKVLIEGTGAYTSTYSSVAFNGIP 373


>gi|118580411|ref|YP_901661.1| diaminopimelate decarboxylase [Pelobacter propionicus DSM 2379]
 gi|118503121|gb|ABK99603.1| diaminopimelate decarboxylase [Pelobacter propionicus DSM 2379]
          Length = 439

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 61/410 (14%), Positives = 115/410 (28%), Gaps = 47/410 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP YL D+  +  + D  L +    G+ +  A+K  +   +   +         SS+ E
Sbjct: 24  GTPVYLHDRAFIEQSCDQLLNMPNAFGLHVRYAMKANSDRTVLRVVTGKGLDLDCSSVDE 83

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDA-----VLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
               H      +             +      ++ N       +++Q     D A++   
Sbjct: 84  AARAHSAGIPYDRMMLTTQEVPLGQEREELEGMIRNGLKYNVCSLTQYRLIADFAKQAGI 143

Query: 117 KIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKI----ESEIKNVNGLMFHNNCEN-K 170
            + +R++P  S              S  G    D       +  K +     H +  +  
Sbjct: 144 DLSIRVHPGASGGGESQTRDTGSEYSCFGVHLNDIPTVVEMARDKGLRFTQVHVHIGSGG 203

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD--------YPVKDFCQRLKEFS 222
               +   +         +      +S GGG+                      RLKEF 
Sbjct: 204 DPEKWRENIDRELGFVRSYFPDAGTVSFGGGLKVARMPGEKQADINELGTYAAARLKEFK 263

Query: 223 EKYSV--QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-PDYLLYQESA 279
           E+     ++ +EPG  +V N+  + T V+D     +   ++       +    L   E  
Sbjct: 264 EQTGRALRMEIEPGTFVVANSGYIITRVMDKKLTNEMNFLLVDGGMELLSRPLLYGSEHP 323

Query: 280 TIYPNT---------------GPYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDR 317
                                      + GR C +GD                  +IGD 
Sbjct: 324 ISIVGQDGTLRSSEYDSYSVGTATPYGIVGRCCESGDSVRLDNEGTIVPVQVAEAEIGDY 383

Query: 318 ISFEDVAGYNINRKN-WFNGINMPTIAVKNVDGTIKAIR-EFSYNDYYNN 365
           +       Y+ +     +N        +K  D  +  IR          N
Sbjct: 384 VVIGGTGAYSESMSPENYNSHRKAPAVMKMKDAELVLIRKRQVREQLVQN 433


>gi|298693389|gb|ADI96611.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp.
           aureus ED133]
          Length = 400

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 54/381 (14%), Positives = 107/381 (28%), Gaps = 36/381 (9%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66
           Y+ D   L ++L         +  ++  A+K  +   + DT++QY++G   +S  E+  G
Sbjct: 21  YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79

Query: 67  HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                     +       +    AV      I   ++ +L +     +   K   + +  
Sbjct: 80  LAFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRV 139

Query: 125 S-VSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE----NKSF 172
           +                ++ G          +  +     +++G  FH+       N   
Sbjct: 140 NLAGPFPNATLHMAGRPTQFGISEDEVDDVIEAALAMPNIHLDGFHFHSISNNLDSNLHV 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKDFCQRLKEFSEKY 225
              +   K  +         ++ I+LGGGI           +     +  + L    E  
Sbjct: 200 DVVTLYFKKAKAWSEKHQFPLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQEME 259

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284
            V +  E G  IV +     T VLDI +       +                        
Sbjct: 260 DVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFDIYR 319

Query: 285 TGPYTA------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                              + G+ C   D+F        +  GD I F+    Y  +  +
Sbjct: 320 YKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSISH 379

Query: 333 W-FNGINMPTIAVKNVDGTIK 352
             F     P           +
Sbjct: 380 HDFLSHPHPEFIYLTQTKEDE 400


>gi|259415136|ref|ZP_05739058.1| ornithine decarboxylase [Silicibacter sp. TrichCH4B]
 gi|259349046|gb|EEW60800.1| ornithine decarboxylase [Silicibacter sp. TrichCH4B]
          Length = 405

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 50/362 (13%), Positives = 112/362 (30%), Gaps = 24/362 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  +ID + +                ++  A+K   A  +   L        ++S  E+ 
Sbjct: 47  PTLVIDSEAVARQYMGLARGLGR--ARIHYAVKANPAPEILRRLCALGSNFDAASRAEIE 104

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +            +    K     A         +   +     K         I +RI 
Sbjct: 105 MCRAAGASAARITFGNTIKKPADIAFAHALGITHYAADAVEELEKLAEHAPGAHICIRIL 164

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA---MLK 180
              S + + L+        +     D+  +     +GL FH   + +    +      + 
Sbjct: 165 VEASSADWPLSRKFGCAPDMAVGLMDRCVALGLVPHGLSFHVGSQTREPQMWEPILDQVA 224

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKYSV--QIYLEPGE 235
           ++ +        ++ +++GGG     +     P     + +K  + ++    ++  EPG 
Sbjct: 225 DVWQAARAAGHDLKLLNIGGGFPAGYRNAVMAPEVYATEVMKRVNARFPDAAEVMAEPGR 284

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPNTGP 287
            +V     +   V+ +S    + +           S +   + + + Y +  T   +   
Sbjct: 285 GLVAEAGAIAAEVMLVSRKHDSDLHRWVYLDIGKFSGLAETMDEAIRY-KITTDRDHETM 343

Query: 288 YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIA 343
              ++ G SC + D+  E         +K GDR+       Y     +  FNG     + 
Sbjct: 344 GACVLAGPSCDSADVLYEKQPVQLPLGLKSGDRVVIHSCGAYTTTYASIGFNGFPPLDVV 403

Query: 344 VK 345
           V 
Sbjct: 404 VL 405


>gi|221122172|ref|XP_002161495.1| PREDICTED: similar to predicted protein, partial [Hydra
           magnipapillata]
          Length = 468

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 60/365 (16%), Positives = 118/365 (32%), Gaps = 37/365 (10%)

Query: 36  LKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSN 92
           +K      +   L +       +S  E+    +     +   +      +     A   N
Sbjct: 1   VKSNPNPVVIALLARLGVNFDCASKCEIETVLDLGVNPDRIIFANPCKQESHVKYANTKN 60

Query: 93  CDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152
              + F++  +   +K K      ++ LRI    S S F L           +K     +
Sbjct: 61  VRKMTFDS--EGELYKVKENFPGAELVLRIKVDDSKSTFKLGRKFGASLETTQKLLQLAK 118

Query: 153 SEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDY 209
               NV G+ FH          F   +K+    F            + +GGG      + 
Sbjct: 119 DLDLNVIGVSFHVGTGCYDAALFYNAVKSAADVFQQGDIIGFTFTLLDIGGGFPGFKDET 178

Query: 210 PVKDFCQ------RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI------SENIKN 257
              +           + F  K ++ I  EPG+  V +  TL   V+ +      ++N + 
Sbjct: 179 ISMENIADKLNLSLAEFFPSKRNLSIIAEPGKYFVESAFTLCCNVISVKEVSNNNKNEQF 238

Query: 258 LVIVDSSVEAHVPDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVK 313
           +  ++  V     D L  ++              + + + G +C + D   E  +   + 
Sbjct: 239 MYYLNDGVYTSFKDVLFGKKFIPFLLQESSTSLLFKSSLWGPTCDSTDCISEEIYLPKLS 298

Query: 314 IGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI---REFS-------YN--- 360
           + D + F+++  Y+    + FNG N P I   N +     +   R +S       +    
Sbjct: 299 VQDWLYFKNMGAYSTCFASKFNGFNPPVIYYMNPELAENIVNNTRRYSQLFSDVVFEMLP 358

Query: 361 DYYNN 365
           DY   
Sbjct: 359 DYKER 363


>gi|310794283|gb|EFQ29744.1| pyridoxal-dependent decarboxylase [Glomerella graminicola M1.001]
          Length = 455

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 64/365 (17%), Positives = 110/365 (30%), Gaps = 37/365 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++        +      VK   A+KC     +   L     G   +S  E+  
Sbjct: 74  FFVGDLGEVYR--QHMRWKLNLPRVKPFYAVKCNPDPKVLQLLAALGTGFDCASKTEIDQ 131

Query: 66  GH-EKFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                   E   Y    K       +       + F+   +L K          ++ LRI
Sbjct: 132 VLNMGTAPERIIYAQPCKTTSYLRYVKAMGVKQMTFDNADELRKISKL--FPEAELYLRI 189

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
                 S   L+           +     +    NV G+ FH        + F   + + 
Sbjct: 190 MTDDESSLCRLSMKFGAAKEATNELLGVAKDLGLNVVGVSFHVGSGASDPMAFYKAVYDA 249

Query: 183 EKEF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
            + F     +  +++ + +GGG    T +D          + F    +V I  EPG   V
Sbjct: 250 YEVFEQGRAYGFEMKTLDIGGGFCGDTFEDMAAVLRGALDEYFPASSNVNIIAEPGRYYV 309

Query: 239 TNTTTLNTTVLD---------------ISENIKNLVIVDSSVEAHVPDY---------LL 274
           +   T+   ++                +  N        S +  H              +
Sbjct: 310 SAAFTIACNIIARRTVDDPALNEKRYMVYVNDGLYGNFSSIMFDHQHPVAKVLRAGTSTV 369

Query: 275 YQESATIYPNTGPYT-AMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFEDVAGYNINRKN 332
           Y   A      G  T   V G +C   D   E   FE+ + +GD + FED+  Y      
Sbjct: 370 YDTPAANACPDGEGTRYSVWGPTCDGIDRITETISFEQELDVGDWLYFEDMGAYTKCSAT 429

Query: 333 WFNGI 337
            FNG 
Sbjct: 430 KFNGF 434


>gi|82749837|ref|YP_415578.1| diaminopimelate decarboxylase protein [Staphylococcus aureus RF122]
 gi|82655368|emb|CAI79750.1| probable diaminopimelate decarboxylase protein [Staphylococcus
           aureus RF122]
          Length = 400

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 56/381 (14%), Positives = 106/381 (27%), Gaps = 36/381 (9%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66
           Y+ D   L ++L        N   ++  A+K  +   + DT++QY++G   +S  E+  G
Sbjct: 21  YIYDLVGLEHHLQHITSSLPN-NCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79

Query: 67  HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                     +       +    AV      I   ++ +L +     +   K   + +  
Sbjct: 80  LAFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRV 139

Query: 125 S-VSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCE----NKSF 172
           +                ++ G    D        +     +++G  FH+       N   
Sbjct: 140 NLAGPFPNATLHMAGRPTQFGISEDDVDDVIEAALAMPKIHLDGFHFHSISNNLDSNLHV 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKDFCQRLKEFSEKY 225
                  K  +         ++ I+LGGGI           +     +  + L    E  
Sbjct: 200 DVVKLYFKKAKAWSEKHRFPLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQEME 259

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284
            V +  E G  IV +     T VLDI +       +                        
Sbjct: 260 DVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFDIYR 319

Query: 285 TGPYTA------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                              + G+ C   D+F        +  GD I F+    Y  +  +
Sbjct: 320 YKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSISH 379

Query: 333 W-FNGINMPTIAVKNVDGTIK 352
             F     P           +
Sbjct: 380 HDFLSHPHPEFIYLTQTKEDE 400


>gi|283767867|ref|ZP_06340782.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           H19]
 gi|283461746|gb|EFC08830.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           H19]
          Length = 400

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 55/381 (14%), Positives = 108/381 (28%), Gaps = 36/381 (9%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66
           Y+ D   L ++L         +  ++  A+K  +   + DT++QY++G   +S  E+  G
Sbjct: 21  YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79

Query: 67  HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                     +       +    AV      I   ++ +L +     +   K   + +  
Sbjct: 80  LAFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRV 139

Query: 125 S-VSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE----NKSF 172
           +                ++ G          +  +     +++G  FH+       N   
Sbjct: 140 NLAGPFPNATLHMAGRPTQFGISEDEVDDVIEAALAMPNIHLDGFHFHSISNNLDSNLHV 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKDFCQRLKEFSEKY 225
              +   K  +         ++ I+LGGGI F         +     +  + L    E  
Sbjct: 200 DVVTLYFKKAKAWSEKHQFPLKHINLGGGIGFNYADLTSQFEWDNFVENFKTLIVEQEMG 259

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284
            V +  E G  IV +     T VLDI +       +                        
Sbjct: 260 DVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFDIYR 319

Query: 285 TGPYTA------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                              + G+ C   D+F        +  GD I F+    Y  +  +
Sbjct: 320 YKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSISH 379

Query: 333 W-FNGINMPTIAVKNVDGTIK 352
             F     P           +
Sbjct: 380 HDFLSHPHPEFIYLTQTKEDE 400


>gi|306821216|ref|ZP_07454830.1| diaminopimelate decarboxylase [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
 gi|304550728|gb|EFM38705.1| diaminopimelate decarboxylase [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
          Length = 394

 Score =  143 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 57/382 (14%), Positives = 123/382 (32%), Gaps = 43/382 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y+ +K  + +N        K    + L ++K      +  T++    G+ ++S  EV+
Sbjct: 15  PCYVYEKDIIESNCKQLQNAVK--DAEFLYSIKANPFLPVVKTISSQGIGSDAASSNEVL 72

Query: 65  LG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           L    +   E   Y+   K  +         T I ++  +L   + K+ + +  + + + 
Sbjct: 73  LSEQAQIPAEMIYYSAPGKTEQDIIKTWGKCTFIADSFHELELLEQKSAQENTTLEVGVR 132

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-NVNGLMFHNNCENKSFLCFSAMLKNI 182
              +++ F  +  +  F    +   D   +     + G+  H   +       S    N 
Sbjct: 133 IHPNFTMFEGSIVSSKFGIDEDLLFDTKWNYPHLTLTGIHVHLQSQILDSSILSRYYHNC 192

Query: 183 EKEFGHFI----TQIEWISLGGGIHFTDKDYPVKD---------FCQRLKEFSEKYSVQI 229
                         I++I+ G GI     +   K            +  K+  E  + ++
Sbjct: 193 YNLAEKVNSLPHANIKFINFGSGIGIVYDEINEKPLNISEIGQSIGEIAKKNKEGLNAKL 252

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYL--------------- 273
           +LE G  +  N  T  T ++D   +  K  V+V +++   +   +               
Sbjct: 253 FLETGRFLTCNAGTYFTPIIDRKISRGKTYVVVQNALNGFLRPTMSELLKKTLGQDSSIA 312

Query: 274 ---------LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
                         + I          V G  C A D+  +        IGD ++  +  
Sbjct: 313 PQEPFFTSVNQCNFSIIENTNEVEVVDVVGTLCTALDVMAKDISLPKSDIGDVLAVSNAG 372

Query: 325 GYNINRKN-WFNGINMPTIAVK 345
            Y        F+   +P   + 
Sbjct: 373 SYAFTLSPFAFSSHELPKEYLY 394


>gi|282915455|ref|ZP_06323227.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           D139]
 gi|282320558|gb|EFB50896.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           D139]
          Length = 400

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 54/381 (14%), Positives = 107/381 (28%), Gaps = 36/381 (9%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66
           Y+ D   L ++L         +  ++  A+K  +   + DT++QY++G   +S  E+  G
Sbjct: 21  YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79

Query: 67  HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                     +       +    AV      I   ++ +L +     +   K   + +  
Sbjct: 80  LAFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRV 139

Query: 125 S-VSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE----NKSF 172
           +                ++ G          +  +     +++G  FH+       N   
Sbjct: 140 NLAGPFPNATLHMAGRPTQFGISEDEVDDVIEAALAMPNIHLDGFHFHSISNNLDSNLHV 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKDFCQRLKEFSEKY 225
              +   K  +         ++ I+LGGGI           +     +  + L    E  
Sbjct: 200 DVVTLYFKKAKAWSEKHQFPLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQEMG 259

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284
            V +  E G  IV +     T VLDI +       +                        
Sbjct: 260 DVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFDIYR 319

Query: 285 TGPYTA------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                              + G+ C   D+F        +  GD I F+    Y  +  +
Sbjct: 320 YKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSISH 379

Query: 333 W-FNGINMPTIAVKNVDGTIK 352
             F     P           +
Sbjct: 380 HDFLSHPHPEFIYLTQTKEDE 400


>gi|269964974|ref|ZP_06179139.1| putative diaminopimelate decarboxylase protein [Vibrio
           alginolyticus 40B]
 gi|269830277|gb|EEZ84502.1| putative diaminopimelate decarboxylase protein [Vibrio
           alginolyticus 40B]
          Length = 400

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 60/354 (16%), Positives = 116/354 (32%), Gaps = 34/354 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV-M 64
            Y+ D   L  ++    +I     V+L  A K   +  +  TL  Y+DG  ++S  E+  
Sbjct: 28  AYVYDLSALEEHIKQLRHILPR-NVELFYAAKANPSGPILKTLAPYVDGFEAASGGELTH 86

Query: 65  LGHEKFGGETHAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IGLR 121
           L  ++                   A+  + D I   ++++L +     ++L++   I LR
Sbjct: 87  LHQQQLDKPLIFGGPGKMLSELQQAIELDVDAIHVESLTELQRIGALTERLNRPASIFLR 146

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNCENKSFLC 174
           +N  +              +  G    +   + +        ++ G  FH          
Sbjct: 147 MNIDIGDITLSKLAMGGKPTPFGLDESELSNALMLLRDFPQVSLKGFHFHLMSHQLDVER 206

Query: 175 FSAMLKNIEKEFGHFITQIE----WISLGGGIHFTD----KDYPVKDFCQRLKEFSEK-- 224
             A+++   +    +  + E     I+LGGG+        + +P  +FC +L+    K  
Sbjct: 207 HLALMQRYFQVVKAWQQEFELGELMINLGGGMGINYQNPEQHFPWMEFCDKLEFLIAKEQ 266

Query: 225 -YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282
                +  E G  I          VLDI +N+    ++      H         +   + 
Sbjct: 267 VQHWTLRFECGRFITAACGYYVMEVLDIKQNLGENFVIARGGTHHFRTPAAQNHDHPFVI 326

Query: 283 PNTGPYT----------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
                +           A   G+ C   D+         V IGD + F     Y
Sbjct: 327 LKNEQHHEISHPIQHAQATFVGQLCTPKDVLARNQHVAHVDIGDYVVFTLAGAY 380


>gi|120564762|gb|ABM30201.1| PvsE [Vibrio alginolyticus]
          Length = 400

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 57/354 (16%), Positives = 116/354 (32%), Gaps = 34/354 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV-M 64
            Y+ D   L  ++    ++     V+L  A K   +  +  TL  Y+DG  ++S  E+  
Sbjct: 28  AYVYDLSALEEHIKQLRHVLPR-NVELFYAAKANPSGPILKTLAPYVDGFEAASGGELTH 86

Query: 65  LGHEKFGGETHAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IGLR 121
           L  ++                   A+  + D     ++++L +     ++L++   I LR
Sbjct: 87  LHQQQLDKPLIFGGPGKMLSELQQAIELDVDAFHVESLTELQRIGALTERLNRPASIFLR 146

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNCENKSFLC 174
           +N  +              +  G    +   + +        ++ G  FH          
Sbjct: 147 MNIDIGDITLSKLAMGGKPTPFGLDESELSNALMLLRDFPQVSLKGFHFHLMSHQLDVER 206

Query: 175 FSAMLKNIEKEFGHFITQIE----WISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYS 226
             A+++   +    +  + +     I+LGGG+        + +P  +FC +L+    K  
Sbjct: 207 HLALMQRYFQVVKTWQQEFKLSELMINLGGGMGINYQNPEQHFPWMEFCDKLEFLIAKEQ 266

Query: 227 ---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282
                +  E G  I          VLDI +N+    ++      H         +   + 
Sbjct: 267 VQDWTLRFECGRFITAACGYYVMEVLDIKQNLGENFVIARGGTHHFRTPAAQSHDHPFVI 326

Query: 283 PNTGPYT----------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
             +  +           A   G+ C   D+         V IGD + F     Y
Sbjct: 327 LKSEQHHEISHPIQHAQATFVGQLCTPKDVLARNQHVAHVDIGDYVVFTLAGAY 380


>gi|152996197|ref|YP_001341032.1| ornithine decarboxylase [Marinomonas sp. MWYL1]
 gi|150837121|gb|ABR71097.1| Ornithine decarboxylase [Marinomonas sp. MWYL1]
          Length = 388

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 55/360 (15%), Positives = 114/360 (31%), Gaps = 27/360 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP+ +ID   +             A   +  A+K   A  +   L         +S YE
Sbjct: 25  DTPFVVIDTDIIDEAYTELTKGFPVAD--IFYAIKANPAPEILTLLRDRGSNFDVASRYE 82

Query: 63  V--MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           +  +        +  +Y    K  +           +F T S+ +  ++ A+        
Sbjct: 83  LDKLFAIGGISPDQVSYGNTIKKAKDVRYFYEKGVRMFATDSEAD-LRNIAKAAPGSRVY 141

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAM 178
               +            +   R        + ++   +   G+ FH   + +    + A 
Sbjct: 142 VRILTEGTVTADWPLSRKFGCRPDMAMDLLVLAKELGLIPYGISFHVGSQQRDIGAWDAA 201

Query: 179 LKNIEKEF----GHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYS----VQ 228
           + +++  F          +E I++GGG       +   +  + + +  F E+       +
Sbjct: 202 IASVKVIFERLKEEDGIVLEMINMGGGFPANYIARTNDLATYAEEITRFLEEDFGTDLPR 261

Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATIYP 283
           I LEPG ++++N   L + V+ IS          +          +       +      
Sbjct: 262 IILEPGRSLISNAGVLVSEVVLISRKSHTALNRWVFTDVGKFSGLIETLDESIKYPIHVE 321

Query: 284 NTGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338
             G     ++ G +C + DI  E +       + IGDR+ +     Y        FNG  
Sbjct: 322 KGGELEEVIIAGPTCDSADIMYENYKYGLPLNLAIGDRMYWLSTGAYTTTYSAVEFNGFP 381


>gi|87200351|ref|YP_497608.1| Orn/DAP/Arg decarboxylase 2 [Novosphingobium aromaticivorans DSM
           12444]
 gi|87136032|gb|ABD26774.1| Orn/DAP/Arg decarboxylase 2 [Novosphingobium aromaticivorans DSM
           12444]
          Length = 408

 Score =  142 bits (359), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 44/376 (11%), Positives = 94/376 (25%), Gaps = 34/376 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++  +  L   +             +  A+K      +   + + +DG   +S  E
Sbjct: 34  GTPLFVYSRALLTRRVQDLRAAMPERLA-IHYAVKANPYIPLLSHMLELVDGFDIASGGE 92

Query: 63  VMLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           + +           ++     +D E++A ++   T+   +  +  +    A +L     L
Sbjct: 93  LAIVRDAGIDPAMVSFAGPGKRDAELEAAIAAAVTLNLESEGEATRALAIAGRLGIVPRL 152

Query: 121 RINPSVSYSKFILADPNRPFSR-LGEKCKDKIESEIKNV------NGLMFHNNCENK--- 170
            I  +  +            ++  G   +       K +       G       +     
Sbjct: 153 AIRVNPDFDLKGSGMKMGGGAKPFGIDAERVPALARKLISAGAEWRGFHIFAGSQALSAD 212

Query: 171 -SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK----- 224
                 +  +    +        +   +LGGG                +           
Sbjct: 213 AIIETQAQTIGLAARLAEETGAPLPKCNLGGGFGIPYFPGDEPVDVVAVGAALGDQFAAL 272

Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-------- 272
                     +E G  +V        TV+D  E+   + +V      H            
Sbjct: 273 PDVLRDTAFCIELGRYLVGEAGIYLATVIDRKESHGEVYLVTDGGLHHQLAASGNFGTVV 332

Query: 273 --LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                   AT +       A + G  C   D   +         GD +       Y  + 
Sbjct: 333 RRNYPSAIATRFGAAVEEEASIVGCLCTPLDRLADKGGFPRTDTGDLVVIFCAGAYGASA 392

Query: 331 KN-WFNGINMPTIAVK 345
               F G       + 
Sbjct: 393 SPAAFLGQGPAREMLV 408


>gi|28871704|ref|NP_794323.1| pyridoxal-dependent decarboxylase, pyridoxal binding
           domain-containing protein [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28854956|gb|AAO58018.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein
           [Pseudomonas syringae pv. tomato str. DC3000]
          Length = 359

 Score =  142 bits (359), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 52/356 (14%), Positives = 109/356 (30%), Gaps = 30/356 (8%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67
           +ID   +    D           K+  A+K   A  + + L         +S+YE+    
Sbjct: 2   VIDTAIISKAYDDLRAGFDF--AKVYYAVKANPAVEVINLLKDKGSSFDIASIYELDKVL 59

Query: 68  E-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
               G E  +Y    K  +               ++ + L      A      + +    
Sbjct: 60  SCGVGPERMSYGNTIKKSKDIRYFYEKGVRLFATDSEADLRNIAKAAPGAKVYVRILTE- 118

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLKNI 182
               +        +   +        I +    +   G+ FH   + +    + A +  +
Sbjct: 119 --GSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDAAIAKV 176

Query: 183 EKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSVQIYLE 232
           +  F          ++ I++GGG                ++  + LKE       +I LE
Sbjct: 177 KVIFERLKEEDGIVLKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDDLPEIILE 236

Query: 233 PGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287
           PG ++++N   L + V+ ++        + +          +       +        G 
Sbjct: 237 PGRSLISNAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIETMDEAIKFPIWTEKKGE 296

Query: 288 -YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338
               ++ G +C + DI  E +       + IGDR+ +     Y  +     FNG  
Sbjct: 297 MEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRMYWLSTGAYTTSYSAVEFNGFP 352


>gi|83310487|ref|YP_420751.1| diaminopimelate decarboxylase [Magnetospirillum magneticum AMB-1]
 gi|82945328|dbj|BAE50192.1| Diaminopimelate decarboxylase [Magnetospirillum magneticum AMB-1]
          Length = 376

 Score =  142 bits (359), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 47/345 (13%), Positives = 101/345 (29%), Gaps = 29/345 (8%)

Query: 17  NLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETH 75
           N             ++  A+K   A  +   L +       +S  E+ L        E  
Sbjct: 29  NYHGLRRWLPL--AEVYYAVKANPAPEIVRMLTEEGSRFDVASRGEIDLCLANGAPAERI 86

Query: 76  AYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFIL 133
           ++    K     A           F++ ++L K  + A        + +    +      
Sbjct: 87  SFGNTIKKQSDIAYAYAKGVRLYAFDSEAELEKLAEAAPGSRVFCRILMTCDGAEWPLSR 146

Query: 134 ADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFI 190
                         K        +  G+ FH   +      +   +      F       
Sbjct: 147 KFGCEIDMAKDLLVK--AREMGLDPYGVSFHVGSQQTDLRQWDIAVGKAAMLFSALDAAG 204

Query: 191 TQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTL 244
            ++  ++LGGG     +          +     + +        + +EPG ++V +   L
Sbjct: 205 IELRMVNLGGGFPARYRKEVDGLERYAEAVMDAMTKHFGNNIPSMIIEPGRSLVGDAGIL 264

Query: 245 NTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPNTGPYTAMVCGRS 296
            T V+ IS    +  +    ++          + + + Y+   T          ++ G +
Sbjct: 265 ETEVVLISRKGYDDDVRWVYLDVGKFGGLAETMDEAIKYR-IVTTRDGDDTAPVVLAGPT 323

Query: 297 CLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337
           C + DI  E   +     +K+GD++       Y  +     FNG 
Sbjct: 324 CDSADILYEKAGYEMPLSLKVGDKVRILSTGAYTTSYSAVNFNGF 368


>gi|297528776|ref|YP_003670051.1| Orn/DAP/Arg decarboxylase 2 [Geobacillus sp. C56-T3]
 gi|297252028|gb|ADI25474.1| Orn/DAP/Arg decarboxylase 2 [Geobacillus sp. C56-T3]
          Length = 401

 Score =  142 bits (359), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 48/375 (12%), Positives = 104/375 (27%), Gaps = 37/375 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            Y+ D   L  +  +       + V+L  A+K  A   +  T+  Y+ G   +S  E+  
Sbjct: 24  AYVYDLDNLRVHTASLSASLPPS-VRLFYAVKANADERILKTVAPYVTGFEVASGGELQK 82

Query: 66  GHEKF-GGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
               F             D E+ A +      I   +V +L +    A +    + + + 
Sbjct: 83  VRRLFADSPVIFGGPGKTDEELTAAIEERVALIHVESVWELQRLNWIAARRQTTVRVLLR 142

Query: 124 PS-VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-------GLMFHNNCENKSFLCF 175
            +    +           ++ G   +   E+    +        G  FH+   +      
Sbjct: 143 VNLRQAASGATLHMAGKPTQFGIDEQHIAEAIHTALTLPSIDLQGFHFHSMSNHTDEQAH 202

Query: 176 SAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-------K 224
            + ++            +  +   +++GGG+     +   +       +           
Sbjct: 203 LSFIETCLSFVAQAETTYGRRFSVVNVGGGVGVHYNEPDRQFRWNWFSKELNLLLRRQAP 262

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYP 283
               +  E G  I  +       VLD+  N      +      H+            +  
Sbjct: 263 PHWTVIFELGRFIAAHNGYYAAEVLDLKTNYGTHFAIIRGGTHHLRLPAAWKMNHPFLVI 322

Query: 284 NTGPYTAM------------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
               +               + G  C   DI         +++GD + F     Y  +  
Sbjct: 323 PIDEWPYPFNRPSLHNQRVTLAGELCTPNDILARDVPCARLRVGDIVLFRCAGAYGWDIS 382

Query: 332 NW-FNGINMPT-IAV 344
           +  F     P  I +
Sbjct: 383 HHDFLSHPHPEFIYL 397


>gi|103487413|ref|YP_616974.1| Orn/DAP/Arg decarboxylase 2 [Sphingopyxis alaskensis RB2256]
 gi|98977490|gb|ABF53641.1| Orn/DAP/Arg decarboxylase 2 [Sphingopyxis alaskensis RB2256]
          Length = 409

 Score =  142 bits (359), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 48/376 (12%), Positives = 98/376 (26%), Gaps = 34/376 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   L             A V+L  A+K      +   +   +DG   +S  E
Sbjct: 35  DTPLFVYDSAMLAARAAEWRAAMPAA-VQLHYAMKANPYPPLLAFMAGLVDGFDVASGGE 93

Query: 63  VMLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           +             ++     +D E++A L    T+   +  +  +    A  L     L
Sbjct: 94  LKAALASGMDAAHISFAGPGKRDRELEAALEAGATLNLESAGEAERALAIAAHLGATPRL 153

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV-------NGLMFHNNCENKS-- 171
            +  +  +            ++        + + ++ +        G       +     
Sbjct: 154 AVRVNPDFDLKGSGMKMGGGAKPFGVDAAAVPALVRRLIDAGADWRGFHIFAGSQALDAA 213

Query: 172 --FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227
                 +  +    +      T    ++LGGG+               + E   +     
Sbjct: 214 AIAEMQAQTVALAARLADAIGTAPPLVNLGGGMGVPYFPGDTAVDAAAVGEALGETLAAR 273

Query: 228 -------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-------- 272
                  +  +E G  +V       T ++D   +     +V      H            
Sbjct: 274 DAALADSRFAMELGRWLVAEAGVYLTRIVDRKVSHGETFLVTDGGLHHQLAASGNFGTVI 333

Query: 273 --LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                   A  +      T  V G  C   D  G+        +GD I+      Y  + 
Sbjct: 334 RRNYPIAVANAFGREPVETVAVVGCLCTPLDRLGDQVALPRADVGDLIAIFQAGAYGASA 393

Query: 331 KN-WFNGINMPTIAVK 345
               F G       + 
Sbjct: 394 SPAAFLGQGPARELLV 409


>gi|156554146|ref|XP_001599279.1| PREDICTED: similar to ENSANGP00000020224 [Nasonia vitripennis]
          Length = 475

 Score =  142 bits (359), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 51/396 (12%), Positives = 105/396 (26%), Gaps = 63/396 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P++L+D   L+    T   + +   V    A+KC     +  TL         +S  E++
Sbjct: 38  PFHLLDVGDLVRKHRTW--VERIPRVVPHYAVKCNPNPTVIKTLAALGASFDCASKQEIV 95

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                    +   +    K               +  +++ +L K ++          + 
Sbjct: 96  TVMAYGVPADRIIFANPVKTPTQIRYAQKVGVSKMTADSMWELRKIRELYPDAK----II 151

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIE---SEIKNVNGLMFHNNCENKSFLCFSA- 177
           I      +        +     GE+    I         ++G  FH        +  S  
Sbjct: 152 IRFRCDAAVSDSYLGQKFGCDPGEEAVRLIRGCRDLGLELHGFSFHVGSPCGEVMALSRG 211

Query: 178 ---MLKNIEKEFGHFITQIEWISLGGGIH--------FTDKDYPVKDFCQRLKEFSEKYS 226
                  I+         ++ I +GGGI              +     C   KE   +Y 
Sbjct: 212 IGICKYLIDVARSLGHHNVQLIDIGGGIPGDSDFLLDEVWSYFTRLHRCFVFKELLFEYK 271

Query: 227 VQIYLEPGEA-IVTNTTTLNTTVLDISENIKNLVIVDSSVEA------------------ 267
             I+          N  +    V   +      +       A                  
Sbjct: 272 HLIFWLGDYYRTNWNYRSKVKKVTTTTFKHTWALPWYYVTSAVKAVAYVHGKKIVHEGNR 331

Query: 268 --HVPDYLLYQESAT------------------IYPNTGPYTAMVCGRSCLAGDIFGEFH 307
             ++         +                      N   + + + G +C + D   +  
Sbjct: 332 KKYMYYVTDGAYGSFLDELIQLKARLPDPLNKSHSVNEEKHLSTLWGPTCDSLDCIAKDV 391

Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343
                ++GD + ++D+  Y       FNG + PT+ 
Sbjct: 392 HLPEFQVGDWLYWKDMGAYTSCLSTNFNGFSCPTVY 427


>gi|226357231|ref|YP_002786971.1| diaminopimelate decarboxylase [Deinococcus deserti VCD115]
 gi|226319221|gb|ACO47217.1| putative diaminopimelate decarboxylase (DAP decarboxylase)
           (Meso-2,6-diaminoheptanedioate carboxy-lyase)
           [Deinococcus deserti VCD115]
          Length = 409

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 57/391 (14%), Positives = 114/391 (29%), Gaps = 40/391 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            Y+ D   L  +          A  +L  A+K      + +TL  ++DG   +S  E+  
Sbjct: 18  AYVYDLAALDEHAAWLRATLPAA-CELFYAVKANPEPRILETLAPHVDGFEVASGGELAQ 76

Query: 66  GHEKFGG-ETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--KIGLR 121
              +F             D E   A+ +  + +   + S+L +    A+   +   + LR
Sbjct: 77  VSARFPQVPVIFGGPGKTDSELAQALEAGAEVLHVESRSELERLAWTARSRGRVAAVLLR 136

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENKSFLC 174
           +N  V              +  G    +         +     + G  FH          
Sbjct: 137 VNLRVGDLPDTPLTMGGRPTPFGIDAAEIPGCLAWLEQHPELQLRGFHFHLLSHQLDARA 196

Query: 175 FSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS---- 226
              +L    ++   +        + +++GGGI    ++              +  +    
Sbjct: 197 HLRLLAAYAEQVRAWQSRYGLTTDLLNVGGGIGVNYRNPAQSFDWSTFCTGMQALTATLP 256

Query: 227 -VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESAT--IY 282
            V+  LE G  +          V+D+  N+    +V                      + 
Sbjct: 257 GVRWRLELGRFVTAGCGYYAMQVIDLKHNLGEAFVVARGGTHQFRTPAAQGHNHPFEVLA 316

Query: 283 PNTGPYTA----------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
            ++ P+             V G+ C   D+         V+ GD + F     Y  N  +
Sbjct: 317 VDSWPHAYSRVELAGGLVTVVGQLCTPKDVLARRVPVGRVRAGDLLLFSLAGAYAWNISH 376

Query: 333 -WFNGINMPTIAV--KNVDGTIK---AIREF 357
             F     P +     +  G ++     RE 
Sbjct: 377 QQFLSHPAPQMVFLAVDQGGPVQQEGTRREE 407


>gi|331697150|ref|YP_004333389.1| Ornithine decarboxylase [Pseudonocardia dioxanivorans CB1190]
 gi|326951839|gb|AEA25536.1| Ornithine decarboxylase [Pseudonocardia dioxanivorans CB1190]
          Length = 374

 Score =  142 bits (358), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 58/359 (16%), Positives = 112/359 (31%), Gaps = 29/359 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TPY ++D   +       +      G ++L A+K      +  TL     G  ++S  E
Sbjct: 15  PTPYLVLDPAVVARRHADVVAAF--PGAEVLYAVKACPHPAVLRTLVAAGAGFDAASPAE 72

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           V L                         A  +     + ++V  L++    A      + 
Sbjct: 73  VDLCLAAGADPARIGLGNPVRGAAATAAAHRAGVRRFVTDSVEDLDELAAHAPGAAVLVR 132

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN---VNGLMFHNNCENKSFLCFS 176
           L ++ S S + F        F    +   D + +         G+ FH   +      ++
Sbjct: 133 LLVDDSGSATPFF-----GKFGATPQVATDLLRACASRGLVAAGVTFHAGSQQTRPTTYA 187

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY--PVKDFCQRLKEFSEKYSVQIYLEPG 234
           A +            Q   + +GGG+    +       +F   +       + Q+ LEPG
Sbjct: 188 AGVAAALAVARDAGLQHPVLDVGGGLPVAYRADVPSFTEFAAAIGGVDGIDAAQLVLEPG 247

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------DYLLYQESATIYPNTG 286
            A+V     L T+VL +S            ++A           + + Y           
Sbjct: 248 RALVAEAGVLRTSVLRVSRRPGVDHRRWVYLDAGRYQGLAETENEAIGYPLRVPGRDGPC 307

Query: 287 PYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN-WFNGI-NMP 340
               ++ G +C   D+      +     ++ GD +       Y  +  +  FNG   +P
Sbjct: 308 G-PVVLAGPTCDGDDVLYRRTPYALPLSLRAGDHVDLLHAGAYTASYASVGFNGFGPLP 365


>gi|296534024|ref|ZP_06896539.1| possible lysine decarboxylase [Roseomonas cervicalis ATCC 49957]
 gi|296265643|gb|EFH11753.1| possible lysine decarboxylase [Roseomonas cervicalis ATCC 49957]
          Length = 376

 Score =  142 bits (358), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 51/366 (13%), Positives = 112/366 (30%), Gaps = 30/366 (8%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP  ++D  ++  N             ++  A+K   A  +   L        ++SL EV
Sbjct: 16  TPCLVVDVDRVAENYGRLKAAMPL--ARIYYAVKANPAAPILSRLVDLQSQFDAASLEEV 73

Query: 64  MLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            +        E  ++      +     A  +      F++  +L K    A        +
Sbjct: 74  RMCLAAGARPEAISFGNTVKKESAIQAAYEAGVRMFAFDSEPELRKLARSAPGAKVYCRI 133

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
            +    +     L+      + + ++          +  G+ FH   +      + A + 
Sbjct: 134 LVENVGAEW--PLSRKFGCEAEMAKELMVLARDLGLDPYGISFHVGSQQTRTAAYEAAIA 191

Query: 181 NIEKEF---GHFITQIEWISLGGGIHFTDKDY--PVKDFCQRLKEFSEKYSVQIYL---- 231
            +   F         +   +LGGG     +     + DF   +     ++          
Sbjct: 192 KVAMIFTDLKEAGINLRMANLGGGYPVRYRSEVPEIDDFGAAIMGAMVEHFGNALPEILV 251

Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------DYLLYQESATIYP 283
           EPG  IV +   L++ V+ +S   K+  +    ++            + + Y+       
Sbjct: 252 EPGRFIVGDAGVLSSEVVLVSSKGKDDPVRWVYLDIGRFGGLAETEGEAIKYRFRTPHDG 311

Query: 284 NTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI-N 338
                   + G +C + D   E   +     ++ GDR+       Y     +  FNG   
Sbjct: 312 L-AEGPVTIAGPTCDSTDTLYEKSNYRLPLALQSGDRVELLSTGAYVTTYASQGFNGFAP 370

Query: 339 MPTIAV 344
           +    +
Sbjct: 371 LAEHYI 376


>gi|94310055|ref|YP_583265.1| Orn/DAP/Arg decarboxylase 2 [Cupriavidus metallidurans CH34]
 gi|93353907|gb|ABF07996.1| diaminopimelate decarboxylase (DAP decarboxylase) [Cupriavidus
           metallidurans CH34]
          Length = 397

 Score =  142 bits (358), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 53/376 (14%), Positives = 94/376 (25%), Gaps = 35/376 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            YL D   L                 L  A+K  +   +   L    DG   +S  E+  
Sbjct: 21  AYLYDLDDLRLRTTRLRAALPE-QCALYYAVKANSDAPVLRALLGVADGFEVASFGEIER 79

Query: 66  GHEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                     A+    K               I   +  QL++    A++  +   + + 
Sbjct: 80  VRGVDAEVPIAFGGPGKTDAELEGALRLGVGLIHVESTLQLSRLDAVARRQGRCADVLLR 139

Query: 124 PSVS--------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175
            + +                     + L +            V GL  H    +      
Sbjct: 140 ANPAYGLPGATLQMGGGATQFGIDEALLPDVLAQSRTMPNVRVVGLHVHAGSNSLDADTH 199

Query: 176 ----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFSEKYSV 227
                  +   ++        +EW+++GGGI    +     +    FC  L     + + 
Sbjct: 200 LALIDRHIALAKRLRDLHGLTLEWLNVGGGIGIDYQNPERHFDWDRFCHGLAALLRETAP 259

Query: 228 --QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284
             +I  E G  I          V+D+  N      V      H                 
Sbjct: 260 STRIVFECGRFISAGCGCYVAEVIDLKRNHDKWFAVLRGGTHHFRLPVSWQHNHPFQVLP 319

Query: 285 T------------GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                              +CG  C   D+         +++GDRI+F     Y  +  +
Sbjct: 320 NDHWDYPFPRPVVERQPVTLCGELCTPKDVLAREVPVDRLRVGDRIAFTMAGAYGWHISH 379

Query: 333 W-FNGINMPTIAVKNV 347
             F     P       
Sbjct: 380 HDFLSHPHPERVFIGG 395


>gi|302331871|gb|ADL22064.1| pyridoxal-dependent decarboxylase decarboxylase [Staphylococcus
           aureus subsp. aureus JKD6159]
          Length = 400

 Score =  142 bits (358), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 54/381 (14%), Positives = 107/381 (28%), Gaps = 36/381 (9%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66
           Y+ D   L ++L         +  ++  A+K  +   + DT++QY++G   +S  E+  G
Sbjct: 21  YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79

Query: 67  HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                     +       +    AV      I   ++ +L +     +   K   + +  
Sbjct: 80  LAFKPTNHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRV 139

Query: 125 S-VSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE----NKSF 172
           +                ++ G          +  +     +++G  FH+       N   
Sbjct: 140 NLAGPFPNATLHMAGRPTQFGISEDEVDEVIEAALAMPKIHLDGFHFHSISNNLDSNLHV 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKDFCQRLKEFSEKY 225
                  K  +     +   ++ I+LGGGI           +     +  + L    E  
Sbjct: 200 DVVKLYFKKAKAWSEKYRFPLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQEME 259

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284
            V +  E G  IV +     T VLDI +       +                        
Sbjct: 260 DVTLNFECGRFIVAHIGYYVTEVLDIKKVHDAWYAILRGGTQQFRLPVSWQHNHPFEIYR 319

Query: 285 TGPYTA------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                              + G+ C   D+F        +  GD I F+    Y  +  +
Sbjct: 320 YKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSISH 379

Query: 333 W-FNGINMPTIAVKNVDGTIK 352
             F     P           +
Sbjct: 380 HDFLSHPHPEFIYLTQTKEDE 400


>gi|49482366|ref|YP_039590.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|221142240|ref|ZP_03566733.1| pyridoxal-dependent decarboxylase decarboxylase [Staphylococcus
           aureus subsp. aureus str. JKD6009]
 gi|257424263|ref|ZP_05600692.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|257426939|ref|ZP_05603341.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp.
           aureus 65-1322]
 gi|257429577|ref|ZP_05605964.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp.
           aureus 68-397]
 gi|257432224|ref|ZP_05608587.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp.
           aureus E1410]
 gi|257435183|ref|ZP_05611234.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp.
           aureus M876]
 gi|282902714|ref|ZP_06310607.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp.
           aureus C160]
 gi|282907116|ref|ZP_06314964.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282912362|ref|ZP_06320158.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp.
           aureus WBG10049]
 gi|282912980|ref|ZP_06320772.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp.
           aureus M899]
 gi|282921396|ref|ZP_06329114.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           C427]
 gi|282922607|ref|ZP_06330297.1| siderophore staphylobactin biosynthesis protein SbnH
           [Staphylococcus aureus subsp. aureus C101]
 gi|283959571|ref|ZP_06377012.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp.
           aureus A017934/97]
 gi|293498035|ref|ZP_06665889.1| siderophore staphylobactin biosynthesis protein SbnH
           [Staphylococcus aureus subsp. aureus 58-424]
 gi|293511624|ref|ZP_06670318.1| siderophore staphylobactin biosynthesis protein SbnH
           [Staphylococcus aureus subsp. aureus M809]
 gi|293550233|ref|ZP_06672905.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp.
           aureus M1015]
 gi|295426669|ref|ZP_06819308.1| siderophore staphylobactin biosynthesis protein SbnH
           [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|297589130|ref|ZP_06947771.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           MN8]
 gi|49240495|emb|CAG39152.1| pyridoxal-dependent decarboxylase decarboxylase [Staphylococcus
           aureus subsp. aureus MRSA252]
 gi|257273281|gb|EEV05383.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|257276570|gb|EEV08021.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp.
           aureus 65-1322]
 gi|257280058|gb|EEV10645.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp.
           aureus 68-397]
 gi|257283103|gb|EEV13235.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp.
           aureus E1410]
 gi|257285779|gb|EEV15895.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp.
           aureus M876]
 gi|269939651|emb|CBI48019.1| pyridoxal-dependent decarboxylase decarboxylase [Staphylococcus
           aureus subsp. aureus TW20]
 gi|282314828|gb|EFB45214.1| siderophore staphylobactin biosynthesis protein SbnH
           [Staphylococcus aureus subsp. aureus C101]
 gi|282315811|gb|EFB46195.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           C427]
 gi|282323080|gb|EFB53399.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp.
           aureus M899]
 gi|282324058|gb|EFB54374.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp.
           aureus WBG10049]
 gi|282330015|gb|EFB59536.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282597173|gb|EFC02132.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp.
           aureus C160]
 gi|283789163|gb|EFC27990.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp.
           aureus A017934/97]
 gi|290919280|gb|EFD96356.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp.
           aureus M1015]
 gi|291096966|gb|EFE27224.1| siderophore staphylobactin biosynthesis protein SbnH
           [Staphylococcus aureus subsp. aureus 58-424]
 gi|291465582|gb|EFF08114.1| siderophore staphylobactin biosynthesis protein SbnH
           [Staphylococcus aureus subsp. aureus M809]
 gi|295129121|gb|EFG58748.1| siderophore staphylobactin biosynthesis protein SbnH
           [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|297577641|gb|EFH96354.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           MN8]
 gi|302750005|gb|ADL64182.1| pyridoxal-dependent decarboxylase decarboxylase [Staphylococcus
           aureus subsp. aureus str. JKD6008]
 gi|312436765|gb|ADQ75836.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp.
           aureus TCH60]
 gi|315194579|gb|EFU24968.1| pyridoxal-dependent decarboxylase decarboxylase [Staphylococcus
           aureus subsp. aureus CGS00]
 gi|329312822|gb|AEB87235.1| Pyridoxal-dependent decarboxylase decarboxylase [Staphylococcus
           aureus subsp. aureus T0131]
          Length = 400

 Score =  142 bits (358), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 54/381 (14%), Positives = 107/381 (28%), Gaps = 36/381 (9%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66
           Y+ D   L ++L         +  ++  A+K  +   + DT++QY++G   +S  E+  G
Sbjct: 21  YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79

Query: 67  HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                     +       +    AV      I   ++ +L +     +   K   + +  
Sbjct: 80  LVFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRV 139

Query: 125 S-VSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE----NKSF 172
           +                ++ G          +  +     +++G  FH+       N   
Sbjct: 140 NLAGPFPNATLHMAGRPTQFGISEDEVDDVIEAALAMPNIHLDGFHFHSISNNLDSNLHV 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKDFCQRLKEFSEKY 225
                  K  +         ++ I+LGGGI           +     +  + L    E  
Sbjct: 200 DVVKLYFKKAKAWSEKHQFPLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQEME 259

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284
            V +  E G  IV +     T VLDI +       +                        
Sbjct: 260 DVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFDIYR 319

Query: 285 TGPYTA------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                              + G+ C   D+F      + +  GD I F+    Y  +  +
Sbjct: 320 YKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREIQIEAISTGDVIVFKYAGAYGWSISH 379

Query: 333 W-FNGINMPTIAVKNVDGTIK 352
             F     P           +
Sbjct: 380 HDFLSHPHPEFIYLTQTKEDE 400


>gi|88858624|ref|ZP_01133265.1| diaminopimelate decarboxylase, PLP-binding protein
           [Pseudoalteromonas tunicata D2]
 gi|88818850|gb|EAR28664.1| diaminopimelate decarboxylase, PLP-binding protein
           [Pseudoalteromonas tunicata D2]
          Length = 401

 Score =  142 bits (358), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 56/391 (14%), Positives = 115/391 (29%), Gaps = 30/391 (7%)

Query: 1   MIKT---PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTS 57
           +++T   P+++ D  +L  +L           VKL  A+K      +  TL++       
Sbjct: 15  LVQTQDHPFFIYDLDQLAAHLAPLT---AQNVVKLWYAVKANPLSSVIQTLDKAGFNFDV 71

Query: 58  SSLYEVMLGH-EKFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKL 114
           +S  E+     +    E        K  +       +   T +  +++Q+      AQ  
Sbjct: 72  ASAGELNQVLKQGIAAERVLNTGPAKSKKQINHFLEAGVRTFVAESLNQVAWLNQAAQNH 131

Query: 115 HKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKD-----KIESEIKNVNGLMFH---- 164
             ++ + +   + + +           +  G   +        +    N  GL       
Sbjct: 132 QVQLRILLRVQLRWPEGEKNPLGGNSLTPFGLGTQQWQHLNIADYPQLNFVGLHIFQWGN 191

Query: 165 NNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLK 219
               +K    +S M+  ++         +E + LGGG+              +       
Sbjct: 192 MLSTDKLAQLWSQMIAPLQALADQLGFALEILDLGGGLGIPYTTAQDPLNWPQLLDALSN 251

Query: 220 EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-PDYLLYQES 278
              E    ++++E G   V         V++  EN     ++ +    H+    +  Q  
Sbjct: 252 IKFESGVNELWMELGRYAVGECGHYVNPVVEQKENFGYHQLITAGGINHILRPAVTNQAF 311

Query: 279 ATIY---PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-F 334
                   N      ++ G  C A D  G       +   D + F  V  Y        F
Sbjct: 312 PAQLLRQSNAPAREFLIHGPLCTALDSLGTHQLPADLNENDHVIFSQVGAYGFTESMPYF 371

Query: 335 NGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
               +    V   +         +  DYY  
Sbjct: 372 LCHELAAEYVIENNQVRCVRSCET-ADYYLR 401


>gi|323440347|gb|EGA98060.1| diaminopimelate decarboxylase protein [Staphylococcus aureus O11]
 gi|323443170|gb|EGB00789.1| diaminopimelate decarboxylase protein [Staphylococcus aureus O46]
          Length = 400

 Score =  142 bits (358), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 55/381 (14%), Positives = 106/381 (27%), Gaps = 36/381 (9%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66
           Y+ D   L ++L        N   ++  A+K  +   + DT++QY++G   +S  E+  G
Sbjct: 21  YIYDLVGLEHHLQHITSSLPN-NCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79

Query: 67  HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                     +       +    AV      I   ++ +L +     +   K   + +  
Sbjct: 80  LAFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRV 139

Query: 125 S-VSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCE----NKSF 172
           +                ++ G    +        +     +++G  FH+       N   
Sbjct: 140 NLAGPFPNATLHMAGRPTQFGISEDEVDDVIEATLAMPNIHLDGFHFHSISNNLDSNLHV 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKDFCQRLKEFSEKY 225
                  K  +         ++ I+LGGGI           +     +  + L    E  
Sbjct: 200 DVVKLYFKKAKAWSEKHQFPLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQEME 259

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284
            V +  E G  IV +     T VLDI +       +                        
Sbjct: 260 DVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFDIYR 319

Query: 285 TGPYTA------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                              + G+ C   D+F        +  GD I F+    Y  +  +
Sbjct: 320 YKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSISH 379

Query: 333 W-FNGINMPTIAVKNVDGTIK 352
             F     P           +
Sbjct: 380 HDFLSHPHPEFIYLTQTKEDE 400


>gi|115265540|dbj|BAF32802.1| pyridoxal-dependent decarboxylase of pyridoxal binding domain
           [Pseudomonas syringae pv. actinidiae]
          Length = 359

 Score =  142 bits (358), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 52/356 (14%), Positives = 110/356 (30%), Gaps = 30/356 (8%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67
           +ID   +    D      +    K+  A+K   A  + + L         +S+YE+    
Sbjct: 2   VIDTAIISKAYDDLRAGFEF--AKVYYAVKANPAVEVINLLKDKGSSFDIASIYELDKVM 59

Query: 68  E-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
               G E  +Y    K  +               ++ + L      A      + +    
Sbjct: 60  SCGVGPERMSYGNTIKKSKDIRYFYEKGVRLFATDSEADLRNIAKAAPGSKVYVRILTE- 118

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLKNI 182
               +        +   +        I +    +   G+ FH   + +    + A +  +
Sbjct: 119 --GSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDAAIAKV 176

Query: 183 EKEF----GHFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSVQIYLE 232
           +  F          ++ I++GGG                ++  + LKE       +I LE
Sbjct: 177 KVIFERLKEEDGIVLKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDDLPEIILE 236

Query: 233 PGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287
           PG ++++N   L + V+ ++        + +          +       +        G 
Sbjct: 237 PGRSLISNAGILVSEVVLVARKSRTAVERWVYTDVGKFSGLIETMDEAIKFPIWTEKKGE 296

Query: 288 -YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338
               ++ G +C + DI  E +       + IGDR+ +     Y  +     FNG  
Sbjct: 297 MEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRMYWLSTGAYTTSYSAVEFNGFP 352


>gi|325278873|ref|YP_004251415.1| Diaminopimelate decarboxylase [Odoribacter splanchnicus DSM 20712]
 gi|324310682|gb|ADY31235.1| Diaminopimelate decarboxylase [Odoribacter splanchnicus DSM 20712]
          Length = 412

 Score =  142 bits (358), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 64/396 (16%), Positives = 137/396 (34%), Gaps = 34/396 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           I TP YL+++   LNNL       K     + +  + K      +     +        S
Sbjct: 14  IGTPAYLVNEDLFLNNLRDIRAAFKSLYQNIVVGYSFKTNYLPYLCKLALEQGCYAEVVS 73

Query: 60  LYEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQL---NKFKDKAQKL 114
             E  +  +  F G    +N    ++ E    L N   I  ++  ++    + K+   + 
Sbjct: 74  FLEYQIALKVGFTGNQIIFNGPIKRESEFVTALLNGSVINIDSDYEIDYLERLKEIYPEN 133

Query: 115 HKKIGLRINPSV-SYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNC 167
             +IGLR+N S+   +            R G      +K  +++      +  L  H + 
Sbjct: 134 QFEIGLRVNVSIKDENGCSAIYGEEESGRFGFMEDEIDKAIERLTKINCKIISLHGHTSS 193

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIH-------FTDKDYPVKDFCQRLKE 220
           +N++   +  ++  + +   H+   I++I++GGG         F       KD+ + +  
Sbjct: 194 KNRAINNYVQIIDKLFEIQHHYKLDIKYINIGGGFFGPVPPGMFGYATPSYKDYAEVIIA 253

Query: 221 FSEKYSVQI------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLL 274
                           +EPG ++  ++    T V D+ +     +        H+   + 
Sbjct: 254 KLHTNRWFCENRPCLVIEPGMSVAASSMAYITKVFDVKKRSNRWIAQVDGNMFHIRPSMH 313

Query: 275 YQESAT------IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
             +         +  N         G +C+  D+       + V  GD +  ++V GY  
Sbjct: 314 TMKIPFQIISGRVIDNVETKRIDFAGSTCMESDVLVRTETCRQVHQGDFLEIDNVGGYTF 373

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
                F    +P IA+   +  I      +++++  
Sbjct: 374 VMGANFIQF-LPHIAILKNNEFISLREGSNFDNFIE 408


>gi|159043924|ref|YP_001532718.1| ornithine decarboxylase [Dinoroseobacter shibae DFL 12]
 gi|157911684|gb|ABV93117.1| ornithine decarboxylase [Dinoroseobacter shibae DFL 12]
          Length = 398

 Score =  142 bits (357), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 53/354 (14%), Positives = 109/354 (30%), Gaps = 22/354 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   ++       +     G  +  A+K   A  +   L     G  ++S  E+ 
Sbjct: 40  PTLVLDCDAVVAKYHALAHGLGQ-GTLIHYAMKANPAPEILRALAAEGCGFDAASRGEIE 98

Query: 65  -LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                       ++    K     A        +F   ++    K  A     ++ LR+ 
Sbjct: 99  LALAAGATAARISFGNTIKRPSDIAFAHAHGIDLFAADAEAELDKIAAHAPGARVFLRVL 158

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              + + + L+           +  D+         GL FH   + +    +S  L  + 
Sbjct: 159 VGATGADWPLSRKFGCAPDTALRLMDRAAFLGLRPVGLSFHVGSQTRDPGMWSDTLDQMA 218

Query: 184 KEF---GHFITQIEWISLGGGIHFTDKD---YPVKDFCQRLKEFSEKYSVQIYL-EPGEA 236
           + +         +  I++GGG      D          +       ++     + EPG  
Sbjct: 219 EIWHAGRARGHDLNLINIGGGFPAFYGDPILEAETYAGRVGALVRARFGDATVMAEPGRG 278

Query: 237 IVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPNTGPY 288
           +V     +   VL +S   ++ +           S +   + + + YQ            
Sbjct: 279 LVAEAGMIVAEVLLVSRKSEDDLCRWVYLDIGKFSGLAETMEEAIRYQFVTPHDGGETG- 337

Query: 289 TAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338
             ++ G SC + D+  E         ++ GDRI  +    Y     +  FNG  
Sbjct: 338 PCIMAGPSCDSADVLYEQRPVHLPMALQSGDRILIKATGAYTTTYSSVGFNGFP 391


>gi|169860158|ref|XP_001836715.1| ornithine decarboxylase [Coprinopsis cinerea okayama7#130]
 gi|116502232|gb|EAU85127.1| ornithine decarboxylase [Coprinopsis cinerea okayama7#130]
          Length = 503

 Score =  142 bits (357), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 46/368 (12%), Positives = 104/368 (28%), Gaps = 38/368 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV-- 63
           +++ D  ++       +       ++   A+KC     +   L     G   +SL E+  
Sbjct: 107 FFVADLSQVYRQHQRWITCLPE--IQPFYAVKCNPDPYVIRLLAALGAGFDCASLNEISS 164

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +L           +    K        S          +    +K        K+ +RI 
Sbjct: 165 VLNVGGIDPSRIIFANPCKAVSFIRNASRMGVDTMTFDNADELYKVARSHPKAKLVVRIL 224

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S S             +      K +    +V G+ FH          ++  +    
Sbjct: 225 TDDSKSLCAFGIKFGAPLNVVPSLLAKAKELNLDVVGVSFHVGSGCYDPSVYTDAIMRSR 284

Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRL-KEFSEKYSVQIYLEPGEAIVT 239
             F            + +GGG      +       + + + F ++  +++  EPG   V+
Sbjct: 285 TVFDMAKEAGYDFTLLDIGGGFEDALFEKAATVLREAIDRYFPDRKHIKMIAEPGRFYVS 344

Query: 240 NTTTLNTTVLDIS----------------------ENIKNLVIVDSSVEAHVPDYLLYQE 277
               L   ++                                 V  +    + D+ +   
Sbjct: 345 TAFKLAAHIIARRAPLEKDAAPATSGTAEEPDQPKVMYYINDGVYGAFNCILFDHQVIHP 404

Query: 278 S-------ATIYPNTGPYTAMVCGRSCLAGDIFG-EFHFEKPVKIGDRISFEDVAGYNIN 329
                     +  +   + + V G +C + D    +      +++GD + F ++  Y + 
Sbjct: 405 YVLSMGGSFHVAESEPKHVSSVWGPTCDSIDCVSPKTVLPVNLQVGDWLGFNNMGAYTVC 464

Query: 330 RKNWFNGI 337
             + FNG 
Sbjct: 465 AASQFNGF 472


>gi|237750793|ref|ZP_04581273.1| LOW QUALITY PROTEIN: carboxynorspermidine decarboxylase NspC
           [Helicobacter bilis ATCC 43879]
 gi|229373238|gb|EEO23629.1| LOW QUALITY PROTEIN: carboxynorspermidine decarboxylase NspC
           [Helicobacter bilis ATCC 43879]
          Length = 301

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 89/286 (31%), Positives = 134/286 (46%), Gaps = 36/286 (12%)

Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGE-------KCKDKIESEIK---------N 157
               IGLRINP  S     + +P  P SRLG          ++  +             +
Sbjct: 17  PQIHIGLRINPLYSEVSPPIYNPCIPKSRLGIIPSVFYRDLENLAKKYNYTDTLSFFKAH 76

Query: 158 VNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR 217
            +GL FH +CE  S       L ++   FG +++  EW++ GGG H T  DY        
Sbjct: 77  FSGLHFHTHCEQDS-SALQRTLPHVIGHFGDYLSHCEWVNFGGGHHITRSDYNCTLLVNL 135

Query: 218 LKEFSEKYS-VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ 276
           +K+F EKY+ +Q+ LEPGEA+   T  L   V+DI EN   + I+D S   H+PD L   
Sbjct: 136 IKDFREKYNGIQVMLEPGEAVGWQTGDLIGEVVDIVENEGLVAILDVSASCHMPDCLEMP 195

Query: 277 ESATIYPN-----------------TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319
                Y                    G Y     G +CLAGD+ G++ F+ P+K+GD+I+
Sbjct: 196 YRPACYKITKDSKGNAVIESDLGEEKGKYCYRFGGPTCLAGDVIGDYSFDMPLKVGDKIA 255

Query: 320 FEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           F D+  Y I +   FNG+ +P++ V   +G  K +++F Y D+   
Sbjct: 256 FVDMIHYTIVKNTTFNGVELPSLGVV-ENGKFKLLKQFGYTDFKER 300


>gi|196013972|ref|XP_002116846.1| hypothetical protein TRIADDRAFT_31473 [Trichoplax adhaerens]
 gi|190580564|gb|EDV20646.1| hypothetical protein TRIADDRAFT_31473 [Trichoplax adhaerens]
          Length = 390

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 59/378 (15%), Positives = 121/378 (32%), Gaps = 33/378 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+YL+D   L+    T + +     ++   A+KC   + M  TL +   G   +S  E+ 
Sbjct: 12  PFYLVDISDLICKYKTWMSLLPR--IRPFYAMKCNPNFQMVATLCRLGAGLDVASAGEIE 69

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIGLR 121
                   GE   Y+   K      V +N     + F++  +L++ K         + L 
Sbjct: 70  TAVALGLKGEDVIYSNTCKGISHLKVAANEGITQMTFDSEEELHRIKRILPNARLLLRLL 129

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           ++ S +  K  +                  +    N+ G  FH   +      +S  ++ 
Sbjct: 130 VDDSGAQWKHGI--KAGAPFSRVSHLFKVAKKLGLNLVGTSFHVGSDCGDPSAYSKAIER 187

Query: 182 IEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-----QIYLEP 233
             K F        ++  + +GGG                + E  + +       +I  EP
Sbjct: 188 CRKAFDIAVSLGMELSMLDIGGGYPGHADTLFKNVGATSINEAIDIHFPSGCGVKIISEP 247

Query: 234 GEAIVTNTTTLNTTVL-----DISENIKNLVIVDSSVEAHVPD----------YLLYQES 278
           G+    +++ L   ++         +++   +    V  H+ +              Q  
Sbjct: 248 GKYFAMSSSILCANIIGKRLRYEDGDVQIEGVKALEVMYHISEGMGGSFLSVIATHQQYI 307

Query: 279 ATIYPNTGPYTAM--VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                N         + G SC A D          ++ G+ + ++D+  Y  +    FNG
Sbjct: 308 PKKLSNNNEKCYRSSLWGPSCTATDCLLSDFNLPEMETGEWVYYDDLGAYTSSTATNFNG 367

Query: 337 INMP-TIAVKNVDGTIKA 353
                +    + D     
Sbjct: 368 FKKAKSSYFISEDYWYDI 385


>gi|21281825|ref|NP_644911.1| hypothetical protein MW0096 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49485000|ref|YP_042221.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|297209376|ref|ZP_06925774.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|300911376|ref|ZP_07128825.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|21203260|dbj|BAB93961.1| putative diaminopimelate decarboxylase [Staphylococcus aureus
           subsp. aureus MW2]
 gi|49243443|emb|CAG41864.1| pyridoxal-dependent decarboxylase decarboxylase [Staphylococcus
           aureus subsp. aureus MSSA476]
 gi|296885837|gb|EFH24772.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|300887555|gb|EFK82751.1| diaminopimelate decarboxylase [Staphylococcus aureus subsp. aureus
           TCH70]
          Length = 400

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 54/381 (14%), Positives = 106/381 (27%), Gaps = 36/381 (9%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66
           Y+ D   L ++L         +  ++  A+K  +   + DT++QY++G   +S  E+  G
Sbjct: 21  YIYDLVGLEHHLQHITLSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79

Query: 67  HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                     +       +    AV      I   ++ +L +     +   K   + +  
Sbjct: 80  LAFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRV 139

Query: 125 S-VSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCE----NKSF 172
           +                ++ G          +  +     +++G  FH+       N   
Sbjct: 140 NLAGPFPNATLHMAGRPTQFGISEDEVDDVIEAALAMPNIHLDGFHFHSISNNLDSNLHV 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKDFCQRLKEFSEKY 225
                  K  +         ++ I+LGGGI           +     +  + L    E  
Sbjct: 200 DVVKLYFKKAKSWSEKHRFPLKHINLGGGIGVNYADLTSQFEWDNFVENFKTLIVEQEME 259

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284
            V +  E G  IV +     T VLDI +       +                        
Sbjct: 260 DVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPVSWQHNHPFEIYR 319

Query: 285 TGPYTA------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                              + G+ C   D+F        +  GD I F+    Y  +  +
Sbjct: 320 YKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREVQIDAISTGDVIVFKYAGAYGWSISH 379

Query: 333 W-FNGINMPTIAVKNVDGTIK 352
             F     P           +
Sbjct: 380 HDFLSHPHPEFIYLTQTKEDE 400


>gi|207092889|ref|ZP_03240676.1| carboxynorspermidine decarboxylase (nspC) [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 251

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 79/224 (35%), Positives = 120/224 (53%), Gaps = 19/224 (8%)

Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ 216
            V+GL FH +CE          L+++EK F  ++  + W++ GGG H T  DY V    Q
Sbjct: 20  GVSGLHFHTHCEQN-ADALCRTLEHVEKHFKPYLENMAWVNFGGGHHITRSDYNVNLLIQ 78

Query: 217 RLKEFSEKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY 275
            +K+F E+Y   ++ LEPGEAI      L  +V+DI +N + + ++D+S  AH+PD L  
Sbjct: 79  TIKDFKERYHNIEVILEPGEAIGWQCGFLIASVIDIVQNDQEIAVLDASFSAHMPDCLEM 138

Query: 276 QESATIYP----------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319
               +I                  N G ++  + G +CLAGD  G F FE P+K GD+I 
Sbjct: 139 PYRPSILKVSAENDEELIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGDKIV 198

Query: 320 FEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
           F+D+  Y I + N FNG+ +P++A  +  G  K ++ FSY DY 
Sbjct: 199 FQDMLHYTIVKNNSFNGVPLPSLAKLDQQG-FKILKNFSYEDYK 241


>gi|2337850|emb|CAA61274.1| ornithine decarboxylase [Ustilago maydis]
          Length = 459

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 57/414 (13%), Positives = 111/414 (26%), Gaps = 65/414 (15%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++        ++R    +    A+KC     +   L     G   +S  E+  
Sbjct: 44  FFVADLSEVYR--QHLRWMRALPRIVPFYAVKCNPDPYVLQLLGALGTGFDCASNGEIEA 101

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             +         Y    K        +  +  +    +     K K      K+ +RI  
Sbjct: 102 VLKLGINPARIIYANPSKAASFVRHAAGHNVGLTTFDNMDELEKMKRYHPSCKLVVRILT 161

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA--MLKNI 182
             S S   L            +  ++      +V G+ FH          F         
Sbjct: 162 DDSKSACQLGLKFGAPIASVPRLLERARELELDVVGVSFHVGSGCYDPDSFRDAVYRACA 221

Query: 183 EKEFGHFITQIEWISLGGGIHFT-------------DKDYPVKDFCQRLKEFSEKYSVQI 229
            +         + + +GGG                 D  +P +DF    KE   K +   
Sbjct: 222 FEMGKQAGFSFDLLDVGGGFGHDNFEMVAGVLGPAIDAYFPDEDFAPGGKEVVGKVNGLR 281

Query: 230 YL-EPGEAIVTNTTTLNTTVLDISENIKNLVIVD----------------------SSVE 266
            + EPG   V +   L T ++ +     +  +                          + 
Sbjct: 282 IIAEPGRFYVHSAFALATNIIAVRRGEPSAAMDHVEATPKAQVMYYQNDGLYGSFNCVIF 341

Query: 267 AHVPDYLLYQESATIYPNTGP----------------------YTAMVCGRSCLAGDIFG 304
            HV           +                             +  V G +C + D   
Sbjct: 342 DHVKFIQSSDAGPRVRVRADDWVARGASGECGRLALQQEAMTLESCSVWGPTCDSIDCVR 401

Query: 305 EFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTI-AVKNVDGTIKAIRE 356
           +       +++GD + +E++  Y I   + FNGI    I            +R+
Sbjct: 402 DHVELPKGLQVGDWLVYENMGAYTICAASTFNGIRRSEIRYTLGHGQDADIVRQ 455


>gi|170099485|ref|XP_001880961.1| ornithine decarboxylase [Laccaria bicolor S238N-H82]
 gi|164644486|gb|EDR08736.1| ornithine decarboxylase [Laccaria bicolor S238N-H82]
          Length = 412

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 49/386 (12%), Positives = 114/386 (29%), Gaps = 41/386 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   +               ++   A+KC     +   L     G   +S  E+  
Sbjct: 18  FFVADLSLVYYQHQRWKACLPE--IQPFYAVKCNPDPYIIRLLAALGTGFDCASNGEISQ 75

Query: 66  GH--EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                        +    K      +A     D + F+   +L K      +    + + 
Sbjct: 76  VLNVGGIDPSRIIFANPCKAVSFVRNAAKMRVDMMTFDNSDELYKIARAHPRAKVIVRIL 135

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
            + S S   F +       +  G   K   +    +V G+ FH          ++  +  
Sbjct: 136 TDDSKSLCAFGIKFGAPLVTVPGLLAK--AKELNLDVIGVSFHVGSGCYDPSVYTDAIMR 193

Query: 182 IEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS-EKYSVQIYLEPGEAI 237
               F            + +GGG   T  +       + ++++  ++ +++I  EPG   
Sbjct: 194 ARAVFDMGKDAGYTFSLLDVGGGFEDTLFEQAAHYLNKAIEQYFPDRRNIKIIAEPGRFY 253

Query: 238 VTNTTTLNTTVLDIS--------------------ENIKNLVIVDSSVEAHVPDYLLYQE 277
           V+    L   ++                               V  +    + D+ +   
Sbjct: 254 VSKAFRLAANIIARRAPIAGPPAQGPSESASDQPAVMYYINDGVYGAFNCILFDHQVIHP 313

Query: 278 S-------ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNIN 329
                     I  +   + + V G +C + D           +++GD + F+++  Y + 
Sbjct: 314 HVLSMNGSFHIADSEPSHLSSVWGPTCDSIDCVSPKTTLPVALQVGDWLGFDNMGAYTVC 373

Query: 330 RKNWFNGINMPTIAVKNVD-GTIKAI 354
             + FNG  +  +       G ++  
Sbjct: 374 AASQFNGFELSNVIYTTGGVGAVEVR 399


>gi|294625584|ref|ZP_06704209.1| diaminopimelate decarboxylase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292600104|gb|EFF44216.1| diaminopimelate decarboxylase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 398

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 52/373 (13%), Positives = 106/373 (28%), Gaps = 32/373 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            Y+ D   L  +    +  +  A  +L  A K  A   +  TL  ++DG  ++S  E+  
Sbjct: 27  AYVYDLAALDRH-AAWMRAQLPAPCELFYAAKANAEPPILRTLAPHVDGFEAASGGELAW 85

Query: 66  GHEKFGGETHAY-NVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
            H +       +      D E+    +  D  +   ++S+L +  + A    + + + + 
Sbjct: 86  LHAQQPQAPLLFGGPGKLDTELAQAAALPDCTVHVESLSELERLAEVAAHAGRCVPVFLR 145

Query: 124 PS---VSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKSFL 173
            +          L    +P    G    D   +  +        + G  FH     +   
Sbjct: 146 MNIAVPGAQSTRLMMGGQPSP-FGLDPCDLHAAMQRLQASPSLRLTGFHFHLMSHQRDAT 204

Query: 174 CFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKY 225
               ++    +    +          ++ GGG           +    FC  L      +
Sbjct: 205 AQLHLIAAYLRIVQQWRHTYALGPLRVNAGGGFGVDYLAPDASFDWAGFCAGLPALLRDH 264

Query: 226 SV--QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282
               ++ LEPG  +  +       VLD+  +      +      H         +     
Sbjct: 265 GTDLRLRLEPGRYVSASCGWYLMEVLDLKRSHGAWFAIARGGTHHFRTPAAQGHDHPFRV 324

Query: 283 PNTG------PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFN 335
                          + G+ C   D+         +  GD ++F     Y  N  +  F 
Sbjct: 325 LRGERAPVLRETPVTLVGQLCTPKDVLARDQHVAALAPGDCLAFPLAGAYAWNISHQQFL 384

Query: 336 GINMPTIAVKNVD 348
               P        
Sbjct: 385 MHPPPQKVFLTEG 397


>gi|70724836|ref|YP_257046.1| LysA protein [Sodalis glossinidius]
 gi|85060454|ref|YP_456155.1| achromobactin biosynthetic and transport gene lysA [Sodalis
           glossinidius str. 'morsitans']
 gi|68696955|emb|CAI59315.1| LysA protein [Sodalis glossinidius]
 gi|68697041|emb|CAI59488.1| LysA protein [Sodalis glossinidius]
 gi|84780974|dbj|BAE75750.1| achromobactin biosynthetic and transport gene lysA [Sodalis
           glossinidius str. 'morsitans']
          Length = 401

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 52/364 (14%), Positives = 109/364 (29%), Gaps = 31/364 (8%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66
           ++ D   L  ++   +    + G +L  A+K  +   +  TL  ++DG   SS  E+   
Sbjct: 26  FIYDLAALQQHIRQVMEALPD-GAELYYAIKANSEPQILQTLAPWVDGFEISSGGEIERL 84

Query: 67  HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                 +   ++           A+      I   +++++++ +  A++  +   + I  
Sbjct: 85  QAAGSDKPFVFSGPGKLDSDLRAALRRQAAAIHVESLNEIDRLQRLAREQGRVQTVLIRI 144

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKN---------VNGLMFHNNCENKSFLCF 175
           +      I +      +       +   +   +         + G   H     +S    
Sbjct: 145 NPQLPAQISSRLAMAGTATPFGIDEADLAVAVHRVDNADHLVLQGFHVHAMSHQQSEQRH 204

Query: 176 SAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKYS 226
             +++   + +  +         I  +++GGGI         +    FC  L E     +
Sbjct: 205 RQLMEYYLQRWPQWKALSAQQEGITHLNVGGGIGVDYLSTSQFDWPGFCHWLGELLAVTA 264

Query: 227 VQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYP 283
               L  EPG  I          +LD   +     +V                +   I+ 
Sbjct: 265 GAPRLRFEPGRFISAFCGYYAIEILDQKTSHGKHFLVCRGGTHQFRLPVAQGHDHPIIHL 324

Query: 284 NTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNG 336
                         V G+ C   D+       K V IGD +       Y  N  +  F  
Sbjct: 325 PQRSDGAGELCAWTVVGQLCTPKDVLSRDCSLKGVAIGDMLVLPLAGAYGYNISHADFLC 384

Query: 337 INMP 340
              P
Sbjct: 385 HPRP 388


>gi|282864989|ref|ZP_06274043.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces sp. ACTE]
 gi|282560414|gb|EFB65962.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces sp. ACTE]
          Length = 412

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 55/397 (13%), Positives = 103/397 (25%), Gaps = 40/397 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM---DGTTSSS 59
            TP Y+ D  ++    D       +  V +  A K      +   +            SS
Sbjct: 12  GTPSYVYDLDRVAAARDELFAALPDE-VAVYYAAKANPHPEILREMRTGGPRVCRAEISS 70

Query: 60  LYEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
           + E+       + G    Y    K  +   +A+     T    +   L    + A +L  
Sbjct: 71  VGELDAVLRAGYEGTEILYTGPGKTTEELAEAMARGVRTFSVESPGDLRHVGETAVRLGI 130

Query: 117 KIGLRINPSVSY--------SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE 168
                I  + +            + +        L     +  +     + GL F     
Sbjct: 131 TADCLIRVNNATGAAATSIRMTGVPSQFGFDGETLPGLAAELRDVPGTTLAGLHFFPLSN 190

Query: 169 NKS----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKE 220
            K        F   +                + LGGG               +    L  
Sbjct: 191 AKDEASLIAEFRHTIATASALQRELGVDFRIVDLGGGFAAPYAVQGDRPVYGELRDALAT 250

Query: 221 FSEKYSVQI-------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL 273
             +++             E G  +V ++ TL T+V+++ ++     +V  +         
Sbjct: 251 SLDEHFPGWREGAPRIACESGRYLVADSGTLLTSVVNVKDSRGTRYVVLDAGINTFGGMS 310

Query: 274 LYQESATIYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
                  +              A + G  C  GD+ G          GD ++  +   Y 
Sbjct: 311 GLGRILPVSVEPHESVGTDGVPAHLAGPLCTPGDLLGRQVPLSDPAPGDLLTVPNAGSYG 370

Query: 328 INRK-NWFNGINMPTIAVKNVDGTIKAIREF---SYN 360
                  F G   P   V   D  +   R     +Y 
Sbjct: 371 PTASLLMFLGRPAPAEIVVRGDDLVSVSRIEHTRTYE 407


>gi|270339902|ref|ZP_06006380.2| conserved hypothetical protein [Prevotella bergensis DSM 17361]
 gi|270333376|gb|EFA44162.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
          Length = 401

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 63/388 (16%), Positives = 137/388 (35%), Gaps = 25/388 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           + TP +++D+++L + +               +  ++K  A         +        S
Sbjct: 12  LNTPCFVLDEKELKDCVSQFQLALSKQFAHSVVGYSVKTNALPYCLKVAKENGCFAEVVS 71

Query: 60  LYEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             E  L  E  F      YN            + +   +   T  +++   D  +    +
Sbjct: 72  FQEYELALEIGFDKRHIIYNGPLKSKETFLDAIQHDAIVNIETWREIDWLDDLPKDQKYE 131

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGE--------KCKDKIESE-IKNVNGLMFHNNCE 168
           IG+R+N + +      A      SR G         K  + I ++    + G+  H   +
Sbjct: 132 IGIRLNINTTAISKEDAFGENDDSRFGFSYESGDFKKAVELIRAKSHVRLVGIHTHKEPK 191

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP-VKDFCQRLKEFSEKYSV 227
            +S   +  ++  +         Q+E+  +GGG        P   D+ +  +   E    
Sbjct: 192 TRSVRFYQRVIAYVLPILTTLHLQLEYWDVGGGFFGPMPGKPTFDDYARCFRTALEDSPY 251

Query: 228 ---QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
              ++ +EPG A++++  +   +V+D+ ++     +        V  +   ++    +  
Sbjct: 252 ANVRLVVEPGNALLSSPFSYVCSVIDVKQHDGRRFVTTDGTRNDVDPFFHKEDYFKRFVY 311

Query: 285 TGP-----YTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGIN 338
           T          +V G +CL  D           + +GDR+ F+ V  Y +     F    
Sbjct: 312 TDTPQLCHQPQVVGGLTCLEYDRLFTLPEGAETLSVGDRVIFDRVGAYTMALTPLFIHY- 370

Query: 339 MPTIAVKNVDGTIKAIREF-SYNDYYNN 365
           +PT+ +K  DG    IR+    +++   
Sbjct: 371 LPTVYLKRNDGDYSIIRKEWGVSEFIRK 398


>gi|156392831|ref|XP_001636251.1| predicted protein [Nematostella vectensis]
 gi|156223352|gb|EDO44188.1| predicted protein [Nematostella vectensis]
          Length = 416

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 58/368 (15%), Positives = 111/368 (30%), Gaps = 35/368 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y++D   ++  L    +++    V+   A+KC     +   L     G   +S  E+  
Sbjct: 40  FYIVDLADVV--LKHKKWVQLLPRVEPFYAMKCNNDPAVLKLLAGLGLGFDCASKGEIQT 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   +   Y    K        S  D  +    +++   K K      ++ LRI  
Sbjct: 98  ILGLGVSPKKIVYANPCKQASHIKYASQHDVAMTTFDNEMELHKIKKLYPDAQLILRIRT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S S   L        +         +    NV G+ FH          ++  +     
Sbjct: 158 DDSKSLCQLGIKFGAPLKQCRHLLKVAQDLGLNVVGVSFHVGSGCFDASAYATAVIAARS 217

Query: 185 EFG---HFITQIEWISLGGGIH-FTDKDYPVKDFCQRLKEFSEKYSVQ-----IYLEPGE 235
            F     F      + +GGG     +     ++ C  +    E++        I  EPG 
Sbjct: 218 VFNLAVQFGFNCTLLDIGGGFPGDPNAAITFEEICTTINPLLEEHFPPSSGVRIIAEPGR 277

Query: 236 AIVTNTTTLNTTVLDIS----------------------ENIKNLVIVDSSVEAHVPDYL 273
              +++ TL   V                                  V  S    + D+ 
Sbjct: 278 YYSSSSFTLAVNVYSRREVQSSSVLAEDVTAPENNGNQGFMYYVNDGVYGSFNCLIFDHA 337

Query: 274 LYQESATIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
             +       +  P Y   + G +C + D   +      V++G+ + F+ +  Y  +  +
Sbjct: 338 TVEAIPVKESSGQPLYQTSIWGPTCDSMDCITKNMMLPKVEVGEWLFFKYMGAYTQSAAS 397

Query: 333 WFNGINMP 340
            FNG   P
Sbjct: 398 TFNGFKKP 405


>gi|169774753|ref|XP_001821844.1| ornithine decarboxylase [Aspergillus oryzae RIB40]
 gi|238496649|ref|XP_002379560.1| ornithine decarboxylase, putative [Aspergillus flavus NRRL3357]
 gi|83769707|dbj|BAE59842.1| unnamed protein product [Aspergillus oryzae]
 gi|220694440|gb|EED50784.1| ornithine decarboxylase, putative [Aspergillus flavus NRRL3357]
          Length = 425

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 61/363 (16%), Positives = 111/363 (30%), Gaps = 38/363 (10%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+ ++D   + N       +     VK   A+KC     +   LN    G   +S  E+ 
Sbjct: 52  PFCVMDLGYVYNEYQRWTSLL--PDVKPFYAVKCNPDTHIIKVLNAMNSGFDCASRNEME 109

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           L   +    E   +    K          S    + F+  ++L K + +      ++ LR
Sbjct: 110 LVMSQGVAPERIIFANPCKKISDLEYAQQSGVRKMTFDNEAELQKIRQR--FPDAQLILR 167

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
              S   + + L       S    K     +S   +V G+ FH     K    F   ++N
Sbjct: 168 CLASDPSATYSLGSKFGASSATSVKLLQCAKSWGLSVVGVSFHIGSNAKDPTAFDKAIQN 227

Query: 182 IEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV----QIYLEPG 234
             + F         +  + +GGG       +        +++   KY      +I  EPG
Sbjct: 228 SREVFDAGLRTGHDMHLLDIGGGF----SAHNFDAMASSIRQCIGKYFCGIDVEIVAEPG 283

Query: 235 EAIVTNTTTLNTTVLDISE---------NIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285
                   TL   ++   +         N   L + D      + +         +   +
Sbjct: 284 RYFAAGALTLACGIIGRRDAAANDEDKENRHMLYLNDGVYGTFICNIFEPGPQPKVLRAS 343

Query: 286 GP----------YTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWF 334
           G               + G +C   D   E       + I D + F ++  Y+      F
Sbjct: 344 GDFYPLDSEDEYERYTIWGPTCDGTDCVAESVALPKSLAIDDWLYFPEMGAYSTCLSTGF 403

Query: 335 NGI 337
           NG 
Sbjct: 404 NGF 406


>gi|89053292|ref|YP_508743.1| ornithine decarboxylase [Jannaschia sp. CCS1]
 gi|88862841|gb|ABD53718.1| ornithine decarboxylase [Jannaschia sp. CCS1]
          Length = 389

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 56/364 (15%), Positives = 112/364 (30%), Gaps = 28/364 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D  ++  + D            +  A+K   A  +   L     G  ++S  E+ 
Sbjct: 31  PTLILDVDRVAQHYDALSAGLGQ--AHIHYAVKANPAPEILARLVTMGSGFDAASKVEIQ 88

Query: 65  LGHEKFGGETHA---YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +  +     +H      V        A     D    +   +L+K    A      I L 
Sbjct: 89  MCLDAGAAPSHISFGNTVKKPSDIAYAHSVGVDVFAADASEELDKIATHAPGAQVYIRLL 148

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF---SAM 178
           +  S +             + L         +      GL FH   + +    +      
Sbjct: 149 VEASGADWPLTRKFGTTKANALDLMAH--ARALGLRPVGLSFHVGSQTRDPAMWGPVLDG 206

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-----VQIYLEP 233
           + ++          ++ +++GGG      D             ++ ++      +I  EP
Sbjct: 207 IADVWTTAKTLGFPLDLLNIGGGFPAFYGDDIPHPTAYAANVMAQVHTRFGDVPRIMAEP 266

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIV--------DSSVEAHVPDYLLYQESATIYPNT 285
           G  +V     +   VL ++    + +           S +   + + + YQ  AT   + 
Sbjct: 267 GRGLVAEAGMIAAEVLLVARKSPDDLHRWVYLDIGKFSGLAETIDEAIRYQF-ATDRDHE 325

Query: 286 GPYTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPT 341
                ++ G SC + D+  E         +K GDRI   +   Y     +  FNG     
Sbjct: 326 AMGPCILAGPSCDSADVLYEKRPIALPLGLKSGDRIWIRNCGAYTTTYASIGFNGFPPLD 385

Query: 342 IAVK 345
           + V 
Sbjct: 386 VVVL 389


>gi|323465202|gb|ADX77355.1| pyridoxal-dependent decarboxylase [Staphylococcus pseudintermedius
           ED99]
          Length = 400

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 46/379 (12%), Positives = 104/379 (27%), Gaps = 36/379 (9%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66
           ++ D   L  +L+T      +   ++  A+K  + + +   +  ++ G   +S  E+   
Sbjct: 20  FIYDMDGLRQHLETVTSQLPD-NCEMYYAMKANSEFEILAAIQPHVAGFEVASEGEIAKA 78

Query: 67  HEKFGGE-THAYNVAYKDCEIDA-VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                 E          D  +   +      I   ++ +L +     ++ +  + + +  
Sbjct: 79  LVHTTAEHVIFGGPGKTDESLRYAIQQGIRRIHVESLYELERLNALLKQENATMSILLRV 138

Query: 125 S-VSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCEN----KSF 172
           +                ++ G                    + G  FH+   N       
Sbjct: 139 NLAGPFPAATLHMAGQPTQFGIDETEVDTVIATAQNMPRIQLEGFHFHSISNNLDAALHL 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSVQ 228
              +   +  +         ++ +++GGGI        + +    F   L    E+  +Q
Sbjct: 199 QVMTLYFQKAKAWAAQHDFTLQHLNVGGGIGVNYADLNEQFDWTYFTTELSALIEEEGLQ 258

Query: 229 IY---LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284
                 E G  +V +     T VLDI         +      H                +
Sbjct: 259 NITINFECGRYMVAHIGYYVTEVLDIKRVHGAWFAILKGGTQHFRLPVSWQHNHPFEILS 318

Query: 285 TGP------------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
            G                   G+ C   D+F +      +  GD + F     Y  +  +
Sbjct: 319 LGEQANQIAPRTIEQQAVTFVGQLCTPKDVFAKAVEIPALSTGDAVIFIYAGAYGWSISH 378

Query: 333 W-FNGINMPTIAVKNVDGT 350
             F     P     + +  
Sbjct: 379 HDFLSHPHPQCIYWSSEKE 397


>gi|294633870|ref|ZP_06712427.1| orn/DAP/Arg decarboxylase, family 2 [Streptomyces sp. e14]
 gi|292830122|gb|EFF88474.1| orn/DAP/Arg decarboxylase, family 2 [Streptomyces sp. e14]
          Length = 459

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 58/392 (14%), Positives = 110/392 (28%), Gaps = 38/392 (9%)

Query: 9   IDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67
           ID + +  ++            V    A+K  +   +   L +   G   +S  E+ L  
Sbjct: 45  IDVRGVRESVAGLHAAFTRVPDVLHTFAVKACSLVPVLRLLRETGMGCEVASPGELRLAL 104

Query: 68  -EKFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK-LHKKIGLRINP 124
              F  E       A    EI   L+    +  + + +L++            +GLR+NP
Sbjct: 105 DAGFPPERIVLDAPAKTRQEIAQALTLGVALNADNLDELDRIDALRPPGCASVLGLRVNP 164

Query: 125 SVSYSKFILADPNRPFSRLGEKC-----KDKIESEI---KNVNGLMFHNNCENKSFLCFS 176
            V              S+ G        ++++         +  L  H   +       +
Sbjct: 165 QVGGGSIEAMSTATRHSKFGVALGDPGPRERVVEAFVRRPWLTRLHAHVGSQGCPLPLIA 224

Query: 177 AMLKNIEKEFGHFI-----TQIEWISLGGGIHFTDKDY-------PVKDFCQRLKEFSEK 224
             L    +            Q+  + LGGG+     D                 +     
Sbjct: 225 EGLAATYRLAEEINERAGRRQVGSLDLGGGLPVNFADDRTLPTYADYVAALDAAEPGLLG 284

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA------HVPDYLLYQES 278
              +I  E G +++     +   V  + +     V +  +          +P     + S
Sbjct: 285 GRYRIVTEFGRSLLAKNGFVAAVVEYVKDAGGRRVALTHAGAHIATRTVFMPAAWPLRAS 344

Query: 279 ATIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
           A                V G  C AGD+         +  GD +   D   Y  +    +
Sbjct: 345 AYGPDGGPKRAPVLRQDVAGPCCFAGDVVAHDRALPELAEGDLVVLHDTGAYYFSTPWAY 404

Query: 335 NGINMPTIA-VKNVDGTIK---AIREFSYNDY 362
           N +  P +      DG I      R  +  + 
Sbjct: 405 NSLPRPAVYGCAEADGRIVFATVRRAQTLREI 436


>gi|299143415|ref|ZP_07036495.1| putative Orn/DAP/Arg decarboxylase 2 [Peptoniphilus sp. oral taxon
           386 str. F0131]
 gi|298517900|gb|EFI41639.1| putative Orn/DAP/Arg decarboxylase 2 [Peptoniphilus sp. oral taxon
           386 str. F0131]
          Length = 404

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 57/392 (14%), Positives = 130/392 (33%), Gaps = 50/392 (12%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +YL D+  +               VK L ++KC +   +  ++     G  ++SL EV++
Sbjct: 17  FYLYDENIIDEYTGRLKRNF--PKVKFLYSVKCNSNSLVVKSVFSRGFGADAASLNEVLM 74

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             E     +   Y+   K            TII +++ ++ K ++ A+K++  + + +  
Sbjct: 75  AEENGLSKDEIYYSAPGKSEYDIREAVKKSTIIADSIGEIKKLQNIAEKMNIVLDIGVRI 134

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSFLCFSAM 178
           +    +F     +   S+ G   +   E       +  N+ G+  H   +        + 
Sbjct: 135 NP---EFSFDSFDGKPSKFGIDEEQLFEYIKNNELKNINIVGIHVHIKSQELKIENLISY 191

Query: 179 LKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY--------- 225
            + +      F     T +++I++G GI             +RL E   +          
Sbjct: 192 YEKMFNLAERFRKILNTDLKFINMGSGIGIQFSPKDKPLDIERLGEEFNRNLEIFLEEYP 251

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL-----YQESA 279
           + ++++E G      +    T V+D   +     ++  +++   +   ++     +    
Sbjct: 252 NTKVFIEVGRYATGKSGRYITKVMDKKISYGKTYVILKNTLNGFLRPAVIKMVEKFTTEP 311

Query: 280 TIYPNTGPYTA------------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321
            +      +T                    + G  C A D+  E      ++  D +   
Sbjct: 312 DLICWEPLFTCSDAFEIRPLKDSSQLEKVTLVGNLCTATDVILEDVTMPKLECEDLVEIT 371

Query: 322 DVAGYNINRKN-WFNGINMPTIAVKNVDGTIK 352
           +   Y        F+    P      VDG I 
Sbjct: 372 NAGAYAAVLSPMQFSSQEKPAELFLTVDGRIL 403


>gi|224368176|ref|YP_002602339.1| LysA3 [Desulfobacterium autotrophicum HRM2]
 gi|223690892|gb|ACN14175.1| LysA3 [Desulfobacterium autotrophicum HRM2]
          Length = 416

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 61/394 (15%), Positives = 128/394 (32%), Gaps = 53/394 (13%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D++K+ + +   L        + L ++K      +   +     G  ++S  EV+ 
Sbjct: 19  FYIYDEKKISSQIQILLENF--PQFEFLYSIKTNPFPPIVKFVASKGFGADAASAQEVIT 76

Query: 66  G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
           G       E   Y+   K  +      +   II ++ ++L      AQ+ +    + +  
Sbjct: 77  GQKAGMPYEKILYSSPGKTSKDIERTIDKAMIIADSYNELVLINSVAQQKNIHKKVGLRI 136

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENKSF----L 173
           ++    F +       S+ G      ++ +          + G+  H  C+         
Sbjct: 137 NID---FSMDGEKGTSSKFGVDENTLVKQKEFLNGFSNIKIVGIHVHLRCQILDHGKICR 193

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---------KDFCQRLKEFSEK 224
            +  +++           ++E+I+LGGG+                   D    ++ F++K
Sbjct: 194 YYERIIELGLFCKETLGWEMEFINLGGGLGIVYSLINDTPLDIEKLSCDCQGLIQRFNDK 253

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYL---LYQESAT 280
             V++ +E G  I        T ++DI E+     +IV+  +       +   L   +  
Sbjct: 254 LKVRLIIETGRFITCEAGRYVTRIVDIKESLGTKYLIVEKGLNGFSRPSIAELLMDYTPE 313

Query: 281 IYPNTGPYT----------------------AMVCGRSCLAGDIFGEFHFEKPVKIGDRI 318
                                            + G  C A DI  +       KIGD +
Sbjct: 314 NSNLKASEPLFTTKDAFEFIIPEGDTFDHEKVSIVGSLCTATDILVKDAMLPKAKIGDIV 373

Query: 319 SFEDVAGYNINRKN-WFNGINMPTIAVKNVDGTI 351
                  Y+ +     F+   +P     N DG I
Sbjct: 374 IVSKAGSYSYSLSPILFSSFCLPFQFYLNSDGEI 407


>gi|302820900|ref|XP_002992115.1| hypothetical protein SELMODRAFT_236454 [Selaginella moellendorffii]
 gi|300140041|gb|EFJ06770.1| hypothetical protein SELMODRAFT_236454 [Selaginella moellendorffii]
          Length = 378

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 44/349 (12%), Positives = 99/349 (28%), Gaps = 16/349 (4%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y++D   +                    A+KC     +   L     G   +S  E+  
Sbjct: 18  FYVLDLATVTRLWKIWKSAMPRVN--PFYAVKCNPDPQLLSMLAALGAGFDVASKAELEA 75

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             +         +    K        +    +     S+   +K K      ++ LR   
Sbjct: 76  VTQLGVAPRNIIFANPCKLPSHITEAAKAGVVYTTFDSEGELYKLKKYHPQAEVLLRFRS 135

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             + ++  L               +  ++    V G+ FH          F+  +K   K
Sbjct: 136 DDTGARCPLGVKYGAEWDECYHLLEVAKTLGIKVAGVAFHVGSGASDVNAFAEGIKAARK 195

Query: 185 EFGHF----ITQIEWISLGGGIHFTDKDYPVKDFCQR-LKEFSEKYSVQIYLEPGEAIVT 239
            F       + ++  + +GGG                 +    E++     +     I  
Sbjct: 196 LFDMAESLGLPRMTMLDIGGGFVSDGGAGVKFAAAAYEIGNALEEHFPLETMADVRIIGE 255

Query: 240 NTTTLNTTVLDI------SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP--YTAM 291
                      +          +      + VE  + D +    +  +Y +     + ++
Sbjct: 256 PGRFFAEEAFSLAALVFGCRVRRREEGNKTVVEYWINDGIYGSMNCLLYDHATLSLHPSI 315

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
           + G +C   D      +   ++ GD + F  +  Y  +  + FNG  +P
Sbjct: 316 IFGPTCDGLDTVLSDVWLPRLQCGDWLVFPRMGAYTKSAGSSFNGFAVP 364


>gi|123388346|ref|XP_001299560.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain
           containing protein [Trichomonas vaginalis G3]
 gi|121880433|gb|EAX86630.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain
           containing protein [Trichomonas vaginalis G3]
          Length = 396

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 51/367 (13%), Positives = 119/367 (32%), Gaps = 26/367 (7%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++ + L           V +  A+KC     +   L     G   +S  EV  
Sbjct: 33  FWVADFNRVRHCLALWEENLNR--VHIHYAMKCCDEPELLKFLADRGVGYDCASQDEVQR 90

Query: 66  GHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                       +    K       A       +++++  +L K          ++ LRI
Sbjct: 91  ILALGVDANRIVFAHPIKSIASIKYAKEHGVTRLVYDSEEELRKI--LRYYPEAEVFLRI 148

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC---ENKSFLCFSAML 179
            P  +++K  L++      +   K          N  G  FH      +  +F      +
Sbjct: 149 KPRFTHAKIQLSNKFGADPKDVPKLMQLASELGANFIGFSFHVGSLCDDITTFRVALEYV 208

Query: 180 KNIEKEFGHFITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSV----QIYLEP 233
             ++ +       + ++ +GGG         Y   +  + +    ++       +   EP
Sbjct: 209 AELKAKAEQIGLNVSFVDIGGGFLPPSVKAKYTFAEIAEAINTAIDELFDGDEIEFLAEP 268

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLL-----YQESATIYPNTGP- 287
           G  I ++   L   V+ + ++ ++       +   +          + E   +    G  
Sbjct: 269 GRFIASDFMDLVIPVISVKDHHEDGEEQSVFMAEGIYGAFNALNYDHAEPHFLIRTEGAA 328

Query: 288 ----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343
                   + G++C + D+  E      +++GD ++ E    Y  +  ++FNG     + 
Sbjct: 329 DGERVKTTLWGQTCDSADLVYEELLWPRLEVGDYLTIEKFGAYTYSPTSFFNGFPHHKVF 388

Query: 344 VKNVDGT 350
             N +  
Sbjct: 389 HINEEDK 395


>gi|85099297|ref|XP_960749.1| ornithine decarboxylase [Neurospora crassa OR74A]
 gi|118381|sp|P27121|DCOR_NEUCR RecName: Full=Ornithine decarboxylase; Short=ODC
 gi|168854|gb|AAA33604.1| ornithine decarboxylase [Neurospora crassa]
 gi|168856|gb|AAA33605.1| ornithine decarboxylase [Neurospora crassa]
 gi|293958|gb|AAA33614.1| ornithine decarboxylase [Neurospora crassa]
 gi|28922270|gb|EAA31513.1| ornithine decarboxylase [Neurospora crassa OR74A]
 gi|38566814|emb|CAE76122.1| ornithine decarboxylase [Neurospora crassa]
          Length = 484

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 55/383 (14%), Positives = 101/383 (26%), Gaps = 55/383 (14%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++        +      VK   A+KC     +   L     G   +S  E+  
Sbjct: 85  FFVADLGEVYR--QHLRWKLNLPRVKPFYAVKCHPDERLLQLLAALGTGFDCASKAEIEQ 142

Query: 66  G-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                       Y    K               + F+   +L K           + +  
Sbjct: 143 VLRMGVDPSRIIYAQPCKTNSYLRYVAQQGVRQMTFDNADELRKIARLYPDAELFLRILT 202

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           + S S  +F +       S  G            NV G+ FH          F   +++ 
Sbjct: 203 DDSSSLCRFSMKFGASLDSTDG--LLGLARQLGLNVVGVSFHVGSGASDPTAFLKAVQDA 260

Query: 183 EKEF---GHFITQIEWISLGGGIHFTDKDYPVKD--FCQRLKEFSEKYSVQIYLEPGEAI 237
              F     +   ++ + +GGG    D    + +       + F     V +  EPG   
Sbjct: 261 HVVFQQAAAYGYSLKTLDVGGGFCSDDSFEQMANVLRAALDEYFPAHTGVNLIAEPGRYY 320

Query: 238 VTNTTTLNTTVLD--------------------------------ISENIKNLVIVDSSV 265
            ++  TL   ++                                 +  N        S +
Sbjct: 321 ASSAFTLACNIIARRTIQDGSAVSVSDSSSMSDDGSVNNGDARYMVYVNDGLYGNFSSIM 380

Query: 266 EAHVPDY----------LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKI 314
             H              +    +A            + G +C   D   E    +  + +
Sbjct: 381 FDHQHPVAKILRAGGRTMYNSVAAHESSAEDAIEYSIWGPTCDGIDRITESIRFREILDV 440

Query: 315 GDRISFEDVAGYNINRKNWFNGI 337
           GD + FED+  Y       FNG 
Sbjct: 441 GDWLYFEDMGAYTKCSATTFNGF 463


>gi|268558706|ref|XP_002637344.1| C. briggsae CBR-ODC-1 protein [Caenorhabditis briggsae]
 gi|187024308|emb|CAP36352.1| CBR-ODC-1 protein [Caenorhabditis briggsae AF16]
          Length = 423

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 54/364 (14%), Positives = 108/364 (29%), Gaps = 31/364 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           + L+D  K++   +      +   ++   A+KC     +   L     G   +S  E+ +
Sbjct: 42  FMLVDLDKIIERFNLWKR--ELPMIEPFYAVKCNTDVVLIRVLASLGCGFDCASREEIDI 99

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             E     +   Y    K           D  +    +     K      + ++ LRI  
Sbjct: 100 VMETGVSADRLIYANPCKTRSFIVHALERDVRMMTFDNAEELIKIGKLHPNAEMILRIAV 159

Query: 125 SVSYSKFILADPNRPFSRLG-EKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
           S   +   L         L   +       E  NV G+ FH          +   L + +
Sbjct: 160 SDPTATCPLNLKFGADPVLAAPQLLKLAHEEGVNVVGISFHVGSGCNDATAYRTALSHAK 219

Query: 184 KEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQ-----RLKEFSEKYSVQIYLEPGE 235
                   +  +++ I +GGG    +  +   +         L EF  +   ++  EPG 
Sbjct: 220 NLCEIGEGYGFKMDIIDMGGGFPGAEHAHNPFEKIAETIRDALDEFFPETDKRLIAEPGR 279

Query: 236 AIVTNTTTLNTTVLDIS------------------ENIKNLVIVDSSVEAHVPD-YLLYQ 276
                  +L   ++  +                          V  S    + D      
Sbjct: 280 FFAAEPFSLVANIIHATEVPASKITKDPKDSAEHGYMYYINEGVYGSFNCILFDHAHPIG 339

Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                      Y + + G +C + D+  +      ++IG+ + + D+  Y +     FNG
Sbjct: 340 GPLFDVDRNEKYMSTIWGPTCDSLDLVEDKKLMVKMEIGEWMYYPDMGAYTLAAATTFNG 399

Query: 337 INMP 340
              P
Sbjct: 400 FAKP 403


>gi|302546570|ref|ZP_07298912.1| pyridoxal-dependent decarboxylase [Streptomyces hygroscopicus ATCC
           53653]
 gi|302464188|gb|EFL27281.1| pyridoxal-dependent decarboxylase [Streptomyces himastatinicus ATCC
           53653]
          Length = 396

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 51/368 (13%), Positives = 98/368 (26%), Gaps = 33/368 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y+ D   L  +            V+L  A K      +   L  Y+ G   +S  E+ 
Sbjct: 23  PAYIYDLTALDAHAREIRDALP-PHVELYYAAKANPEPPVLRALAPYVTGYEVASGGELA 81

Query: 65  LGHEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK-IGLR 121
              E       A+    K       A+    +     +  +L      A +     + + 
Sbjct: 82  HVREAVPERPLAFGGPGKTETELRRALELGVERFHVESEHELRLLSSLADRPVDVLLRVN 141

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENKSFLC 174
           +  +               S  G                    + G+  H      +   
Sbjct: 142 LPLTDEALGGAALAMGGRPSPFGLDPDRVERCLPLFTPDGPLRLRGIHAHLASGLDAPDQ 201

Query: 175 FSA---MLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSV 227
            +    +     +        +  +++GGG+          +  K + + L   +++   
Sbjct: 202 TAVAAGIADWTRELSDRHGLDLTEVNVGGGMGVDYLRPDTRFDWKAYGEGLAGVADRNPG 261

Query: 228 QIY-LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESA------ 279
               +EPG A+        T VLD+  +      V      H+        +        
Sbjct: 262 LTLRIEPGRALTAYCGWYVTEVLDLKHSRGEAFAVLRGGTHHLRTPAAKAHDHPFQVLPA 321

Query: 280 ------TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                    P        + G+ C   D+         ++ GDRI+F     Y  N  + 
Sbjct: 322 ADWDRDWPRPTASGEPVTLVGQLCTPKDVLARGVPVAELRAGDRIAFAMAGAYAWNISHH 381

Query: 334 -FNGINMP 340
            F     P
Sbjct: 382 DFLMHPKP 389


>gi|298374798|ref|ZP_06984756.1| pyridoxal-dependent decarboxylase [Bacteroides sp. 3_1_19]
 gi|298269166|gb|EFI10821.1| pyridoxal-dependent decarboxylase [Bacteroides sp. 3_1_19]
          Length = 407

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 66/395 (16%), Positives = 134/395 (33%), Gaps = 33/395 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP+YL D++  ++N      I K      +L  + K      +   +          S 
Sbjct: 13  GTPFYLFDEKGFIDNYRKLEGIFKAIYPNYQLSYSYKTNYTPFVCQLVRSLGGYAEVVSD 72

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH---K 116
            E  L  +  +  +   YN   K  E+   L +   +  +++ +  +     +       
Sbjct: 73  MEYTLAKKLGYDNKQIVYNGPSKGEEMFDHLEHQGILNIDSLDEAKRIVSYVKGHPDRNY 132

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
            +G+RIN  V                L E      E+   N+ GL  H    ++    ++
Sbjct: 133 TVGIRINMHVGGDFISRFGLVPESKELQETVSLIKETVNLNLIGLHCHI-SRSRGVEAWT 191

Query: 177 AMLKNIEKEFGHF-----------------ITQIEWISLGGGIHFTDKDYPVKDFCQRLK 219
              + + K    +                 + +      GG    T +DY          
Sbjct: 192 KRTEIMLKAADDYIDGVPAYISLGSGMYADMPEFLKQQFGGDTVPTYEDYADCTIQPFAD 251

Query: 220 EFSE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
            + + +    ++ EPG  +V    +  T VL + E     +        ++ +    ++ 
Sbjct: 252 HYKDVENQPILFTEPGTTVVARYLSFVTKVLSVKEVRGRYIANMDGDYHNLGEICTMKKL 311

Query: 279 ATIYPNTGPYTA-----MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                + G          + G +CL  D+     FE+ +  GD + F++V GY+I  K  
Sbjct: 312 PVTVLSGGKEQHTYTNMDIMGFTCLEQDVLYPG-FEQSIAEGDILVFDNVGGYSIVSKPQ 370

Query: 334 FNGINMPTIAVKNVDGTIK-AIREFSYNDYYNNLS 367
           F       + V   +G ++  +R  +++D +N  S
Sbjct: 371 FI-KPQSAMYVLRTNGEVEQIMRAETFDDVFNKFS 404


>gi|150010400|ref|YP_001305143.1| diaminopimelate decarboxylase [Parabacteroides distasonis ATCC
           8503]
 gi|149938824|gb|ABR45521.1| diaminopimelate decarboxylase [Parabacteroides distasonis ATCC
           8503]
          Length = 407

 Score =  141 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 66/395 (16%), Positives = 134/395 (33%), Gaps = 33/395 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP+YL D++  ++N      I K      +L  + K      +   +          S 
Sbjct: 13  GTPFYLFDEKGFIDNYRKLEGIFKAIYPNYQLSYSYKTNYTPFVCQLVRSLGGYAEVVSD 72

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH---K 116
            E  L  +  +  +   YN   K  E+   L +   +  +++ +  +     +       
Sbjct: 73  MEYTLAKKLGYDNKQIVYNGPSKGEEMFDHLEHQGILNIDSLDEAKRIISYVKGHPDRNY 132

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
            +G+RIN  V                L E      E+   N+ GL  H    ++    ++
Sbjct: 133 TVGIRINMHVGGDFISRFGLVPESKELQETVSLIKETVNLNLIGLHCHI-SRSRGVEAWT 191

Query: 177 AMLKNIEKEFGHF-----------------ITQIEWISLGGGIHFTDKDYPVKDFCQRLK 219
              + + K    +                 + +      GG    T +DY          
Sbjct: 192 KRTEIMLKAADDYIDGVPAYISLGSGMYADMPEFLKQQFGGDTVPTYEDYADCTIQPFAD 251

Query: 220 EFSE-KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
            + + +    ++ EPG  +V    +  T VL + E     +        ++ +    ++ 
Sbjct: 252 HYKDVENQPILFTEPGTTVVARYLSFVTKVLSVKEVRGRYIANMDGDYHNLGEICTMKKL 311

Query: 279 ATIYPNTGPYTA-----MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                + G          + G +CL  D+     FE+ +  GD + F++V GY+I  K  
Sbjct: 312 PVTVLSGGKEQHTYTNMDIMGFTCLEQDVLYPG-FEQSIAEGDILVFDNVGGYSIVSKPQ 370

Query: 334 FNGINMPTIAVKNVDGTIK-AIREFSYNDYYNNLS 367
           F       + V   +G ++  +R  +++D +N  S
Sbjct: 371 FI-KPQSAMYVLRTNGEVEQIMRAETFDDVFNKFS 404


>gi|55978166|gb|AAV68704.1| LolD-1 [Neotyphodium uncinatum]
          Length = 420

 Score =  141 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 51/364 (14%), Positives = 98/364 (26%), Gaps = 36/364 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++              V    A+K      +  TL     G   +S+ E+ L
Sbjct: 33  FFVADLNDIVRKWAAWKKAL--PDVTPFFAVKSSYDRRLIQTLATCGAGFDCASVEEIEL 90

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                 G E   +    K      +        I F+   +L K          +  LR+
Sbjct: 91  ILSLGIGAERIVFTHPCKPVSSLGLCRKLGITLITFDNECELRKLHH--HYPEAQTVLRV 148

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFH----NNCENKSFLCFSAM 178
                 +   L           +     ++     + G  FH       +  +++     
Sbjct: 149 FADDPTNADPLGTKFGAAREDIDGLVRLVKELNMKLAGASFHAAPSVAVDAAAYVRGIRD 208

Query: 179 LKNIEKEFGHFITQIEWISLGGGI----HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
              +             + +GGG                  +  K    +  ++I  EPG
Sbjct: 209 AAEVFARARRVGLNPTVLDIGGGYTDSTFQQIAGAVRPAIAECFKSQVVEGRLRILAEPG 268

Query: 235 EAIVTNTTTLNTTV-----------------LDISENIKNLVIVDSSVEAHVPDYLLYQ- 276
                +   L   V                 L I++ I +  ++   V        + + 
Sbjct: 269 TLFSCSPFYLAVKVVARRRNAAAFGNEPATRLYINDGIYSNFMMRFIVNMTFSPVAVIRK 328

Query: 277 --ESATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFEDVAGYNINRKNW 333
                            + GRSC + D        +  V +GD + F+D+  Y       
Sbjct: 329 GVWYDQTEQTMRREACSLWGRSCDSNDCINRDCRLDPEVGVGDWLVFKDMGAYTTVCNTT 388

Query: 334 FNGI 337
           FNG 
Sbjct: 389 FNGF 392


>gi|251787749|ref|YP_003002470.1| Orn/DAP/Arg decarboxylase 2 [Dickeya zeae Ech1591]
 gi|247536370|gb|ACT04991.1| Orn/DAP/Arg decarboxylase 2 [Dickeya zeae Ech1591]
          Length = 440

 Score =  141 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 53/391 (13%), Positives = 107/391 (27%), Gaps = 35/391 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP+Y+   ++ L      LY +  A   +  +LK      +  TL +   G    S  
Sbjct: 32  IGTPFYVYSTRQ-LRRQLQQLYQQLPADTAVYYSLKANPNLSVVKTLVEQGAGCEVCSPA 90

Query: 62  EVMLGH-EKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+          +   Y    K       A+      I+  +V++L      A +     
Sbjct: 91  ELDTALAAGVLPQHILYVGPGKSVPALARAIDCGIRAIVVESVAELETINRLAAQAGTIQ 150

Query: 119 GLRINPSVS-YSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENK 170
            + +  +    S+      +   ++ G                    + G   +      
Sbjct: 151 TVALRINPDFSSEHARLVMSGKPTQFGMTLDTLQTVLPCLHRWPAVALRGFHVYLGTRIL 210

Query: 171 S----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFS 222
           +          +L+            +++I +GGG             +    + +    
Sbjct: 211 NAQAIADNTRNILQMALNLRDQHQLALDFIDVGGGFGVPYFPKETPLDLPSLGEAMAPVM 270

Query: 223 EKYSV-----QIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAH-------- 268
             +       QI +E G  +V       T V ++     K   I D     H        
Sbjct: 271 ADFRRQAATTQIIIELGRYLVAEAGLFVTRVNNLKTAGGKTFAICDGGANCHSAAAGLNS 330

Query: 269 VPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
           +              +       V G  C   D+ G+      +++ D I       Y +
Sbjct: 331 MLRKNFPLLRVGDNQSRPLQPYQVSGPLCTPTDLLGDNVLLPMLEVNDLIGITHSGAYGL 390

Query: 329 NRKNW-FNGINMPTIAVKNVDGTIKAIREFS 358
                 F     P  A+ +    I+  +  +
Sbjct: 391 TASPGAFLSFGYPAEAMVDGRRLIQIRQPET 421


>gi|332184842|gb|AEE27096.1| Diaminopimelate decarboxylase [Francisella cf. novicida 3523]
          Length = 403

 Score =  141 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 55/380 (14%), Positives = 113/380 (29%), Gaps = 33/380 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P++  D   L  +      +     VKL  ALK      +    ++       +S+ E+ 
Sbjct: 20  PFFYYDLDMLEAHAKELQKL----PVKLWYALKANPLSRIIKVFDEQKIRFDVASIGELD 75

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKA--QKLHKKIG 119
                    +   +    K                +  +++Q     D      ++ ++ 
Sbjct: 76  QVLAQGVNPKNILHTGPAKSYSQLEYFLAQGVRIFVIESINQFKDLSDLVEKNNINVEVL 135

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLMFHNNCENKS 171
           LR+    +  +  +    R  +  G    D  +        S   ++ G+          
Sbjct: 136 LRVQLMWNDQESNVLGGGRCVTPFGLSINDWKDFFNSTPSISNNMSIIGMHCFQWGNILC 195

Query: 172 FLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               S + K I K            ++ I LGGGI               L    ++   
Sbjct: 196 LDKLSQIWKTITKALLGLSEAINVSLKVIDLGGGIGVPYNASQKSVSINDLISCFDELKK 255

Query: 226 ---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-PDYLLYQESATI 281
              +++ +LE G   V  +    T V+D        ++V      H+    L  +     
Sbjct: 256 EFPNIEYWLELGRYAVAESGVYLTKVVDRKSVNNINLLVTDGGAHHLVRPALTGESFPID 315

Query: 282 YPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNG 336
                  +      + G  C + D  G  +  K + + D + F+    Y        F  
Sbjct: 316 LLREKSCSERGDFQIHGPLCTSLDKSGTVNLPKDIGLNDYLIFKQTGAYGFTESMPFFLC 375

Query: 337 INMPTIAVKNVDGTIKAIRE 356
            N+P   +    G ++ +R+
Sbjct: 376 HNLPAEIIFYK-GQLQTVRQ 394


>gi|149921405|ref|ZP_01909858.1| putative lysine/ornithine decarboxylase [Plesiocystis pacifica
           SIR-1]
 gi|149817725|gb|EDM77190.1| putative lysine/ornithine decarboxylase [Plesiocystis pacifica
           SIR-1]
          Length = 430

 Score =  141 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 50/360 (13%), Positives = 100/360 (27%), Gaps = 23/360 (6%)

Query: 10  DKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE- 68
           D  +L                   +A+K      + + L     G  ++S  EV L    
Sbjct: 45  DLDRLEARYADLCAAFP-PDTLHAVAIKANPVVALLEVLVDAGAGLEAASWEEVQLALAA 103

Query: 69  KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI---GLRINP 124
               E   + + A  D E+ A L     +  +   +L + +    +        GLR+NP
Sbjct: 104 GCPSERVVFDSPAKTDAELAASLELGLWLNVDHPDELRRIEALLAERPPTRARVGLRVNP 163

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
            +              S+ G    D      +       H +  ++              
Sbjct: 164 QLGSGAIEFTSTISKASKFGVPLTDAPALVRRFPFITGLHVHTGSQGVGLPLLQAAARAT 223

Query: 185 EFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
                   ++W+ +GGG+         +     D+ + L +       ++  E G +I  
Sbjct: 224 AEVAEALALDWLDVGGGVPVRYTDADPEPPSYADWGRALADIPGWGQRRLVTEVGRSIHA 283

Query: 240 NTTTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQESAT-----------IYPNTGP 287
                 +TV  + +       I+    +  +      Q+                   G 
Sbjct: 284 GCGWAVSTVEAVKDVDGKPTLIIHLGADFLMRRVYRPQDWDHEFIVLDPEGRPRAHGEGA 343

Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
             + + G  C +GD+        P   GD +   D   Y +   +      +P       
Sbjct: 344 RESQIAGPLCFSGDMLSRGRSLPPAARGDWLLVRDCGAYTLGMWSRHCSRGLPPTYGYRR 403


>gi|294666035|ref|ZP_06731296.1| diaminopimelate decarboxylase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292604175|gb|EFF47565.1| diaminopimelate decarboxylase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 398

 Score =  141 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 52/373 (13%), Positives = 106/373 (28%), Gaps = 32/373 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            Y+ D   L  +    +  +  A  +L  A K  A   +  TL  ++DG  ++S  E+  
Sbjct: 27  AYVYDLAALDRH-AAWMRAQLPAQCELFYAAKANAEPPILRTLAPHVDGFEAASGGELAW 85

Query: 66  GHEKFGGETHAY-NVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
            H +       +      D E+    +  D  +   ++S+L +  + A    + + + + 
Sbjct: 86  LHAQQPQAPLLFGGPGKLDTELAQAAALPDCTVHVESLSELERLVEVAAHAGRCVPVFLR 145

Query: 124 PS---VSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKSFL 173
            +          L    +P    G    D   +  +        + G  FH     +   
Sbjct: 146 MNIAVPGAQSTRLMMGGQPSP-FGLDPCDLHAAMQRLQASPSLRLTGFHFHLMSHQRDAT 204

Query: 174 CFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKY 225
               ++    +    +          ++ GGG           +    FC  L      +
Sbjct: 205 AQLHLIAAYLRIVQQWRHTYALGPLRVNAGGGFGVDYLAPDASFDWAGFCAGLPALLRDH 264

Query: 226 SV--QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282
               ++ LEPG  +  +       VLD+  +      +      H         +     
Sbjct: 265 GTDLRLRLEPGRYVSASCGWYLMEVLDLKRSHGAWFAIARGGTHHFRTPAAQGHDHPFRV 324

Query: 283 PNTG------PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFN 335
                          + G+ C   D+         +  GD ++F     Y  N  +  F 
Sbjct: 325 LRGERAPVLRETPVTLVGQLCTPKDVLARDQHVAALAPGDCLAFPLAGAYAWNISHQQFL 384

Query: 336 GINMPTIAVKNVD 348
               P        
Sbjct: 385 MHPPPQKVFLTEG 397


>gi|114331720|ref|YP_747942.1| diaminopimelate decarboxylase [Nitrosomonas eutropha C91]
 gi|114308734|gb|ABI59977.1| Diaminopimelate decarboxylase [Nitrosomonas eutropha C91]
          Length = 400

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 61/356 (17%), Positives = 110/356 (30%), Gaps = 36/356 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            YL D   L ++         +  V    A+K  +   +   L +++DG  +SS  E+  
Sbjct: 24  AYLYDLGALASHARNIKSSLPDR-VNFFYAIKANSDLPILSALAEHVDGFEASSGGEIQW 82

Query: 66  GHEKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IGLRI 122
             + F      ++     D E++  + N  T+   +  +L +    A+   +   I LR+
Sbjct: 83  VRQNFPDVPLIFSGPGKLDTELELAILNNVTVHIESRFELERLLHIARHYQQPAEILLRV 142

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDK--------IESEIKNVNGLMFHNNCEN----K 170
           NP     +          ++ G   +            S+     G  FH         +
Sbjct: 143 NPHFEDLRATSLMMGGKPTQFGISVEHLSDCLKMVRDNSDCLYFQGFHFHLLSHQLDAAQ 202

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE------- 223
                SA ++   K    F   I+ I++GGGI    KD   +                  
Sbjct: 203 HLRLLSAYIEQAVKWKEEFNLVIDHINVGGGIGVNYKDIDQQFDWCHFSHGLNNLLIGAA 262

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESAT-- 280
           K   +I  E G  +          V+DI  +     +V      H    Y          
Sbjct: 263 KNIPKIRFEMGRYVSAFCGVYVAEVIDIKTSGNGTYVVVKGGTHHFRTPYAQNHSHPFKV 322

Query: 281 --IYPNTGPY--------TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
             +     PY           + G+ C   D+         +++GD + F     Y
Sbjct: 323 IPVSTWKKPYSRPGLRHGKVNIVGQLCTPKDLLAFDEMVGEIRVGDIVLFSHAGAY 378


>gi|71068208|gb|AAZ23063.1| probable decarboxylase [Streptomyces fradiae]
          Length = 470

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 54/392 (13%), Positives = 109/392 (27%), Gaps = 38/392 (9%)

Query: 9   IDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67
           +D   +   + +          V    A K  +   +   L +   G   +S  E+ L  
Sbjct: 49  LDVDHIRQQVASLRAAFAGAPDVLHTFAAKAASLVPVLRLLAEDGMGCEVASPGELRLAL 108

Query: 68  -EKFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK-LHKKIGLRINP 124
              F  +     + A    EI   L     +  + + +L +            IGLR+NP
Sbjct: 109 DAGFPPDRIVLDSPAKTRSEIAEALRLGVAVNADNLDELERIDALRPPGCSSVIGLRVNP 168

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDK--------IESEIKNVNGLMFHNNCENKSFLCFS 176
            V              S+ G   +D+          +    + GL  H   +       +
Sbjct: 169 QVGGGAIGAMSTATATSKFGVALRDEGARERVVEAFARRPWLTGLHAHVGSQGCPLELIA 228

Query: 177 AMLKNIEKEFGHFI-----TQIEWISLGGGIHFT------DKDYPVKDFC-QRLKEFSEK 224
             +    +            Q+  + +GGG+            Y       +        
Sbjct: 229 EGIAATHRLAEEINAVLGRRQVTGLDIGGGLPVNFTDDTVRPTYQDYTAALRTAVPGLFD 288

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI------SENIKNLVIVDSSVEAHVPDYLLYQES 278
               +  E G +++  +  +   V  +         + +     ++  A +PD    +  
Sbjct: 289 GRYALVTEFGRSLLAKSGFIAARVEYVKEAGGRRIAVTHAGAQTATRTALMPDAWPLRVG 348

Query: 279 ATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
           A         T      V G  C AGD+         ++ GD +   D   Y  +    +
Sbjct: 349 AFDAEGHPKQTPPRVQDVAGPCCFAGDVVATGRELPLLEEGDHVVLYDTGAYYFSTPWAY 408

Query: 335 NGINMPTIAVKNVDGTIK----AIREFSYNDY 362
           N +    +     DG            + ++ 
Sbjct: 409 NSLPRVGVHGYRTDGAQVRSAPVRDPQTLDEI 440


>gi|302867092|ref|YP_003835729.1| Orn/DAP/Arg decarboxylase 2 [Micromonospora aurantiaca ATCC 27029]
 gi|302569951|gb|ADL46153.1| Orn/DAP/Arg decarboxylase 2 [Micromonospora aurantiaca ATCC 27029]
          Length = 415

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 60/389 (15%), Positives = 105/389 (26%), Gaps = 37/389 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y  D  ++  +  T +        +L  +LK      +   L+         S  E
Sbjct: 7   DTPAYRYDLARVRASHATLVAALPAP-SRLFYSLKANPHPALVAALHTAGCDAEICSPGE 65

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI- 118
           +         G+   Y    K       AV +       ++ + L++    A     ++ 
Sbjct: 66  LAAALRAGVPGDRMLYTGPGKRDAEVAGAVRAGVRWFSVDSPAGLDQADRIAAAHGVEVH 125

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENKS 171
            L        +           S+ G                    V G   +      S
Sbjct: 126 CLLRVNDRVPNPGQGLTMTGVASQFGADVDWIEQEPQRFRSRPSAPVRGFHLYTGSNVDS 185

Query: 172 FLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSE 223
                A      +            +  + LGGG             +     R+    +
Sbjct: 186 VDALVAQFTAAARTARRLRDLLGIDLTLLDLGGGFGAPFARPGHNADLTGLADRVATALD 245

Query: 224 KYSVQI-------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV------- 269
                          E G  +     TL T VLD+  +    V+V  S   H+       
Sbjct: 246 DLFPAWRDGTPEVAFESGRFLTATAGTLLTRVLDVKRSQGTPVVVLESGINHLGGMSGLR 305

Query: 270 --PDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
             P  +    +A          A+V G  C   D +        V+ GD ++  +V  Y 
Sbjct: 306 RLPPLVPALHAADGRDGAPLEAAIVAGPLCTPLDTWARAANLPDVRPGDVLAVPNVGAYG 365

Query: 328 INRKNW-FNGINMPTIAVKNVDGTIKAIR 355
           ++     F G   P   V + D  ++  R
Sbjct: 366 LSASLLAFLGHPAPVEVVCDGDRVVETSR 394


>gi|307189142|gb|EFN73590.1| Ornithine decarboxylase [Camponotus floridanus]
          Length = 403

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 53/351 (15%), Positives = 110/351 (31%), Gaps = 23/351 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y++D   ++N     +   K   V    A+KC     +   L     G   +S  E+ L
Sbjct: 35  FYIVDIGDVINKHREWIT--KIPRVVPHYAVKCNPDPTVIKILAALNAGFDCASEQEIRL 92

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIGLRI 122
             +         +    K               +  ++  ++ K KD   +    I ++ 
Sbjct: 93  VMQYGVHANRIVFTNPCKYPSHIKYSKKMGINQLTVDSELEILKIKDLYPEAKIVIRMQY 152

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS---FLCFSAML 179
           +   S + F L            +    +      ++G  FH     +    F     M 
Sbjct: 153 DAKNSDANFGLKFGCESDEE-AVRLIQLMMDLDLTLHGFSFHVGSPCRDLNAFNKTIGMC 211

Query: 180 KNIEKEFGHFI-TQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI--YLEPGEA 236
           K +           ++ I +GGG         + +F   + +  +     I    EPG  
Sbjct: 212 KRLITIAKTMGCEDVQLIDIGGGFPGERGTE-IDEFANIINDAIQDLDPSIKVISEPGRY 270

Query: 237 IVTNTTTLNTTVLDISENIK------NLVIVDSSVEAHVPDYLLYQESATIYPNT----G 286
            +T+  TL   +     +           I      + + + L  +              
Sbjct: 271 YITSAFTLAAYLHSKRLSHNNGKITRMYYINVGVYNSFIEELLGLKFRVPQILFKPASNE 330

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
            + + + G +C + D+  +      + +GD + +ED+  Y I+    FNG 
Sbjct: 331 KFLSTLWGPTCDSFDVIVQEVMLPELHLGDWLVWEDMGAYTISICTKFNGF 381


>gi|308070504|ref|YP_003872109.1| diaminopimelate decarboxylase [Paenibacillus polymyxa E681]
 gi|305859783|gb|ADM71571.1| Diaminopimelate decarboxylase [Paenibacillus polymyxa E681]
          Length = 470

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 61/435 (14%), Positives = 118/435 (27%), Gaps = 84/435 (19%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+Y  D   L  ++ + L       V++  ALK      +   L     G   +S  E+
Sbjct: 17  TPFYYYDGDALHAHVSSLLSRLH-PAVRVHYALKANGNVALAGLLRSLGCGVEIASAGEM 75

Query: 64  MLGHE-KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            +  E  +  E   Y    K      +AV      I   +V +L   +D A +  + +  
Sbjct: 76  FVAMEAGYAAEDVLYAGPGKTVAELNEAVACGIGCIHVESVRELRLLEDIAAQAGQFVRA 135

Query: 121 RINPSVSY--------SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN--- 169
            +  +              +         +L    K   +    +  G+  +   +    
Sbjct: 136 AVRINPDNDLSGATIKMGGVPRPFGVDEGQLDHFFKVLEDCPHVHFQGVQVYTGTQMLKS 195

Query: 170 -KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
            +    F+  L+  E+    +   +  ++LGGG       +        + +     + Q
Sbjct: 196 DQILASFANTLQLAERVQAQYGVAMHTVNLGGGFGVPYFAHEQPLDMDHVIDGLNALAEQ 255

Query: 229 I---------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV---------- 269
                      +E G  +V  +       L   E+     +V      H           
Sbjct: 256 TRTRLPGVKLIIESGRYLVAQSGMYVCRALYTKESKGEKFVVADGGMNHYAAATFRGRRI 315

Query: 270 ---PDYLLYQESATIYPNTGP--------------------------------------- 287
                  + ++ A                                               
Sbjct: 316 RDNYPVRIMRKQAGESKEPKEREVEATLWMGQRDASAQTAVAVEQSLEEVANRIGGPLEE 375

Query: 288 -----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPT 341
                 T  + G  C   D   +     P+  GD I+F +   Y ++     F G   P 
Sbjct: 376 ASMELETVSIVGPLCTPEDCIVKKAQLPPIHEGDYIAFPNAGAYGLSYSPLQFLGHATPA 435

Query: 342 IAVKNVDGTIKAIRE 356
             + +  G +  IRE
Sbjct: 436 E-LLDFRGEVHVIRE 449


>gi|163744805|ref|ZP_02152165.1| decarboxylase, pyridoxal-dependent [Oceanibulbus indolifex HEL-45]
 gi|161381623|gb|EDQ06032.1| decarboxylase, pyridoxal-dependent [Oceanibulbus indolifex HEL-45]
          Length = 392

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 55/366 (15%), Positives = 117/366 (31%), Gaps = 32/366 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  +I ++++    D            +  A+K   A  +   L +   G  ++S  E+ 
Sbjct: 34  PTLVISRERVAAQYDALHSGLG--DAHIHYAVKANPAAEIIRLLVKKGSGFDAASRAEIE 91

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           L   +    E  ++    K     A            ++ ++L+K    A      + L 
Sbjct: 92  LCLSQGAKPENISFGNTIKRASDIAFAHSAGVTLFAADSEAELDKIAAHAPGARVYLRLI 151

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKI-ESEIKNVN--GLMFHNNCENKSFLCFSAM 178
           +      +       +R F   G      +  +    +   GL FH   + +    ++ +
Sbjct: 152 V-----ENSMADWPLSRKFGCAGSALPALLNHAVAVGLVPFGLSFHVGSQTRKAEFWNPV 206

Query: 179 LKNI---EKEFGHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYS---VQIY 230
           L  +             ++ ++LGGG            + +   +    +       Q+ 
Sbjct: 207 LDQVAPLWHAARADGHDLQLLNLGGGFPAFYGESIEAPRAYAAAVISAVKARFGDVPQLM 266

Query: 231 LEPGEAIVTNTTTLNTTVLDISENI----KNLVIVDSSVEAHVPDYLLYQ-ESATIYPNT 285
            EPG  +V     +   V+ +S          V +D    + + +          + P+ 
Sbjct: 267 AEPGRGLVAEAGHIAAEVILVSRKSADDLHRWVYLDIGRFSGLAETEGEAIRYQIVTPHD 326

Query: 286 GPYT--AMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGINM 339
           G  T   ++ G SC + DI  E         ++ GD++       Y  +  +  FNG   
Sbjct: 327 GEETGPCVLAGPSCDSADILYEKRPVHLPLALRDGDKVMIRACGAYTSSYSSVGFNGFPP 386

Query: 340 PTIAVK 345
             + V 
Sbjct: 387 LDVIVL 392


>gi|320007100|gb|ADW01950.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces flavogriseus ATCC 33331]
          Length = 428

 Score =  140 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 53/371 (14%), Positives = 114/371 (30%), Gaps = 36/371 (9%)

Query: 9   IDKQKLLNNLDTALYIRK-NAGVKLL--LALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +D   + +++D          GV++L   A K  +   +   L     G   +S  E+ L
Sbjct: 16  LDADGIRDSVDALRAAFAAEPGVRVLHTFAAKAASLVPVLRLLADCGMGCEVASPGELRL 75

Query: 66  GHE-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-AQKLHKKIGLRI 122
             E  F        + A    E+   L+    +  ++  ++ + ++  +      +GLR+
Sbjct: 76  AVEAGFPPARIVLDSPAKTRAELRLALALGVAVNADSFGEIRRIEELRSPGSPSVLGLRV 135

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFHNNCENKSFLC 174
           NP V              S+ G   +D        +  +E   +  L  H   +  S   
Sbjct: 136 NPQVGGGSIGAMSTATATSKFGVALRDPGARERVVQTFAERPWLTRLHAHVGSQGCSLEL 195

Query: 175 FSAMLKNIEKEFGHFITQIEW-----ISLGGGIH-FTDKDYPVKDFCQRL------KEFS 222
            +A +    +        +       + +GGG+      D     F + +          
Sbjct: 196 ITAGIAETYRLAEEINEALGTRRITGMDIGGGLPVNFSDDESRPAFAEYVTALRAAAPGM 255

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDI------SENIKNLVIVDSSVEAHVPDYLLYQ 276
                ++  E G +++     +   V            + +     ++    +PD    +
Sbjct: 256 FDGRYELVTEFGRSLLAKNGFIGARVEYTKEAGGRRIALTHAGAQVATRTVFMPDAWPLR 315

Query: 277 ESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
             A                + G  C AGD+  +      +  GD +   D   Y  +   
Sbjct: 316 VGAFDGEGNPRSGRTMVQDIAGPCCFAGDLVAQARELPELHEGDFVVLYDTGAYYFSTPW 375

Query: 333 WFNGINMPTIA 343
            +N +  P + 
Sbjct: 376 SYNSLPRPAVY 386


>gi|224061945|ref|XP_002300677.1| predicted protein [Populus trichocarpa]
 gi|222842403|gb|EEE79950.1| predicted protein [Populus trichocarpa]
          Length = 381

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 56/362 (15%), Positives = 110/362 (30%), Gaps = 26/362 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y++D   +   LD          V+   A+K      +  +L         +S  E+ 
Sbjct: 14  PFYVLDLGVVSALLDKWTRTL--PIVRPFYAVKYNPVPALLGSLAALSSNFDCASQAEIE 71

Query: 65  LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           L        +   Y    K       A     +   F++  +L+K +    K    I ++
Sbjct: 72  LVLSLGVSLDRIVYANPCKPGSHIKYAASVGVNLTTFDSKEELDKIQKWHPKCALLIRIK 131

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
                     + +              +  ++   NV G+ FH          +   + +
Sbjct: 132 ALDDSRARCLLGSKY-GALPEEVTPFLEAAQTARLNVVGVSFHIGNRATYSQAYEGAIAS 190

Query: 182 IEKEFGH----FITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
            +  F       + ++  +++GGG        +            F  +  + I  EPG 
Sbjct: 191 AKSVFEAAARFGMPRMTILNIGGGFTAGSLFDEAATSIKPALQAYFPNEPGLTIISEPGR 250

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV---------DSSVEAH-----VPDYLLYQESATI 281
               +  TL T V+      +              +  +  H      P       +   
Sbjct: 251 FFAESPFTLATNVIGKRVRGELREYWINDGIYGSLNCILNDHATITCTPLACNSNSANPT 310

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
                 Y++MV G +C A D     H    +++ D + F ++  Y     + FNG N   
Sbjct: 311 CKGEKSYSSMVFGPTCDALDTVLTVHQLPELQVDDWLVFPNMGAYTAAAGSSFNGFNTAA 370

Query: 342 IA 343
           I 
Sbjct: 371 IL 372


>gi|120600420|ref|YP_964994.1| diaminopimelate decarboxylase [Shewanella sp. W3-18-1]
 gi|146291648|ref|YP_001182072.1| diaminopimelate decarboxylase [Shewanella putrefaciens CN-32]
 gi|120560513|gb|ABM26440.1| ornithine decarboxylase [Shewanella sp. W3-18-1]
 gi|145563338|gb|ABP74273.1| ornithine decarboxylase [Shewanella putrefaciens CN-32]
 gi|319424877|gb|ADV52951.1| Orn/DAP/Arg decarboxylase 2 [Shewanella putrefaciens 200]
          Length = 391

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 54/358 (15%), Positives = 115/358 (32%), Gaps = 26/358 (7%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+ +ID   +    D  +     A   +  A+K   A  +   L         +S+YE+
Sbjct: 30  TPFVVIDTSIIAKQYDDMVNSFPYAN--VYYAVKANPAAEILSLLKDKGSNFDIASIYEL 87

Query: 64  MLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
            +        +  +Y    K  +           ++ + S+ +  +  A++         
Sbjct: 88  DMVMNVGVTADRVSYGNTIKKRQDVRAFYERGVRMYASDSEAD-LRMIAEEAPGSRIYVR 146

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLK 180
             +            +   +     +  + ++   +   G+ FH   + +    + + + 
Sbjct: 147 ILTEGTDTADWPLSRKFGCQNEMAYELLVLAQELGLEPYGISFHVGSQQRDIGAWDSAIG 206

Query: 181 NIEKEF----GHFITQIEWISLGGGIHFTDKDYPVK------DFCQRLKEFSEKYSVQIY 230
            ++  F          ++ I++GGG      D   +           LKE       QI 
Sbjct: 207 KVKSIFDRLRDEHNITLKMINMGGGFPANYIDKTNQLGVYAEQITHFLKEDFGDDLPQII 266

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATIYPNT 285
           LEPG ++++N   L + V+ IS+         +          +       +        
Sbjct: 267 LEPGRSLISNAGILVSEVVLISKKSYTALERWVFTDVGKFSGLIETMDEAIKFPIYTEKK 326

Query: 286 GP-YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338
           G     ++ G +C + DI  E   +     + IGDR+ +     Y        FNG  
Sbjct: 327 GELDKCVIAGPTCDSADIMYEHYSYGLPNDLAIGDRMYWLTAGAYTTTYSAVCFNGFP 384


>gi|302790706|ref|XP_002977120.1| hypothetical protein SELMODRAFT_232921 [Selaginella moellendorffii]
 gi|300155096|gb|EFJ21729.1| hypothetical protein SELMODRAFT_232921 [Selaginella moellendorffii]
          Length = 390

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 43/361 (11%), Positives = 101/361 (27%), Gaps = 28/361 (7%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y++D   +               V    A+KC     +   L     G   +S  E+  
Sbjct: 18  FYVLDLATVTRLWKIWKSAMPR--VHPFYAVKCNPDPQLLSMLAALGAGFDVASKAELEA 75

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             +         +    K        +    +     S+   +K K      ++ LR   
Sbjct: 76  VTQLGVAPRNIIFANPCKLPSHITEAAKAGVVYTTFDSEGELYKLKKYHPQAEVLLRFRA 135

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             + ++  L               +  ++    V G+ FH          F+  +K   K
Sbjct: 136 DDTGARCPLGVKYGAEWDECYHLLEVAKTLGIKVAGVAFHVGSGASDVNAFAEGIKAARK 195

Query: 185 EFGHF----ITQIEWISLGGGIHFTDKDYPVKDFCQR-LKEFSEKYSVQIYLEPGEAIVT 239
            F       + ++  + +GGG                 +    E++  +  +     I  
Sbjct: 196 LFDMAESLGLPRMTMLDIGGGFVSDGGAGVKFAAAAYEIGNALEEHFPRETMADVRIIGE 255

Query: 240 NTTTLNTTVLDISENIKNL--------------VIVDSSVEAHVPDYLLYQESATIYPNT 285
                      ++  +                   ++  +   +   L    + +   + 
Sbjct: 256 PGRFFAEEAFSLAVLVFGCRVRRREEGNKTVVEYWINDGIYGSMNCLLYDHATLSDEEDD 315

Query: 286 GP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            P      + +++ G +C   D      +   ++ GD + F  +  Y  +  + FNG  +
Sbjct: 316 APLLDVELHPSIIFGPTCDGLDTVLSDVWLPRLQCGDWLVFPRMGAYTKSAGSSFNGFAV 375

Query: 340 P 340
           P
Sbjct: 376 P 376


>gi|282878563|ref|ZP_06287344.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein
           [Prevotella buccalis ATCC 35310]
 gi|281299354|gb|EFA91742.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein
           [Prevotella buccalis ATCC 35310]
          Length = 400

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 62/391 (15%), Positives = 135/391 (34%), Gaps = 31/391 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           +KTP +++DK +L   ++              +  ++K  A                  S
Sbjct: 11  LKTPCFVLDKDELTKCINDFQTALDTQFDNSVIGYSVKTNALPYCLKVAKDSGCFAEVVS 70

Query: 60  LYEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             E  L  +  +      YN            + +   +   T  +++   D  +     
Sbjct: 71  FQEYELALKIGYDKRRIIYNGPLKSKQTFLDAIQHDAIVNIETWREIDWLDDLPKNRKHD 130

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG--------EKCKDKIESE-IKNVNGLMFHNNCE 168
           IG+R+N + +      A      SR G        +K  + I ++    + G+  H   +
Sbjct: 131 IGIRLNINTTSISAEDAFGENDDSRFGFSYESGDFQKAVELISAKRHVRLVGIHTHKEPK 190

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP-VKDFCQRLKEFSEKYSV 227
            +S   +  ++  +         Q+E+  +GGG        P   D+ +  +   +    
Sbjct: 191 TRSVRFYQRVIAYVLPILTDLRLQLEYWDVGGGFFGPMPGKPTFDDYARSFRTALDGSPY 250

Query: 228 ---QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
              ++ +EPG A++++  +   +V+D+ ++     +        V  +   ++    +  
Sbjct: 251 ANVRLVVEPGNALLSSPFSYVCSVIDVKQHDGKRFVTTDGTRNDVDPFFHKEDYFKRFVY 310

Query: 285 TGP-----YTAMVCGRSCLAGDIFGEFHFEKP----VKIGDRISFEDVAGYNINRKNWFN 335
           T          +V G +CL  D              + +GDR+ F+ V  Y +     F 
Sbjct: 311 TDTPQLCHQPQVVGGLTCLEYDRLFT---LPEGTEALNVGDRVIFDRVGAYTMALTPLFI 367

Query: 336 GINMPTIAVKNVDGTIKAIREF-SYNDYYNN 365
              +PT+ +K  DG    IR     +++   
Sbjct: 368 HY-LPTVYLKRCDGDYTIIRTEWGVDEFIRK 397


>gi|332020055|gb|EGI60506.1| Ornithine decarboxylase 1 [Acromyrmex echinatior]
          Length = 402

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 51/357 (14%), Positives = 115/357 (32%), Gaps = 24/357 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y++D   ++      +   K   V    A+KC +   +   L         +S  E+  
Sbjct: 35  FYVMDVGDIIKRHQEWIS--KMPKVVPHYAIKCNSNSTVIKVLAALNAFFDCASKQEIAQ 92

Query: 66  GHEK-FGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
             +    GE   +    K         N     +  ++  +L K K+   +    I +R 
Sbjct: 93  VMQYDVQGERIIFAHPNKLPSHIEYSRNVGVERMTVDSEFELTKIKELFPEAKVVIRIRC 152

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           +   S           P  +         +    N++G  FH          +   ++  
Sbjct: 153 DSKNSPILLGAKFGCDP-CKEATYLIQCAQDLGLNLHGFSFHVGTPCLEIDAYLRGIEIC 211

Query: 183 EKEFGHFIT----QIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI--YLEPGEA 236
           ++      +     ++ I +GGG         + +  + + +  E     I    EPG  
Sbjct: 212 KQLIAVAKSIGCNNVKLIDIGGGFSSVSGKE-LDELAKVINDAIENLDPDISVISEPGRY 270

Query: 237 IVTNTTTLNTT-------VLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT---- 285
            V ++ TL +        + D ++  +   +      +   + L  Q             
Sbjct: 271 YVDSSFTLASYLHSKRLAISDDNKTRRMYYMNCGVYNSFFDELLGLQARVPESVFEPKRD 330

Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
             + + + G +  + D+  +        IG+ + + ++  Y +   N FNG  +PT+
Sbjct: 331 EKFLSNIWGPTADSYDLILKDVLLPEFHIGNWLVWRNMGAYTLTLSNTFNGFPIPTV 387


>gi|317508088|ref|ZP_07965772.1| pyridoxal-dependent decarboxylase [Segniliparus rugosus ATCC
           BAA-974]
 gi|316253599|gb|EFV12985.1| pyridoxal-dependent decarboxylase [Segniliparus rugosus ATCC
           BAA-974]
          Length = 421

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 50/366 (13%), Positives = 108/366 (29%), Gaps = 35/366 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P  +ID   +                ++  A+K   A  +   L         +S+ E
Sbjct: 52  PSPCVVIDLATVRERYWQLTAAL--PSARMYYAVKANPAPEVVRELATIGSSFDVASVPE 109

Query: 63  VMLGHEKFGGETHAYNVA---YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + L   +     +         +     A          ++ + L    + A        
Sbjct: 110 IELCLAEGASAQNLCYGNTIKKRADIARAYELGVRLYTTDSEADLEALAEHAPGSSVFCR 169

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF---S 176
           ++     +   F       P   L E    +         G+ FH   +      +    
Sbjct: 170 VQAAGHGAVYSFGSKFGCSPE--LAESLLLRAGKLGLVAGGVSFHAGSQQLDPSAWSAGI 227

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYS-------V 227
               +I         ++  +++GGG+  +      P+ D+   +   + ++         
Sbjct: 228 EQAASIASRLAAQGVRLPLLNIGGGLPGSYTQSAPPLGDYADAISAAAREHFAAVGLEAP 287

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------DYLLY---- 275
           Q+ LEPG  +V +   L + V+ IS            V+A           + + Y    
Sbjct: 288 QLVLEPGRFLVADAGLLRSEVVLISRKSPEDEHRWVYVDAGRYNGLTETEGECVAYLISS 347

Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKN 332
            E       +      + G +C   D+  +   +     +++GD + F     Y  +  +
Sbjct: 348 PEHTGEEAESESGPVYLAGPTCDGDDVLYQRTVYRLPSALRVGDHLDFLSTGAYTASYAS 407

Query: 333 -WFNGI 337
             FNG 
Sbjct: 408 IAFNGF 413


>gi|256274307|gb|EEU09214.1| Spe1p [Saccharomyces cerevisiae JAY291]
          Length = 466

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 57/380 (15%), Positives = 114/380 (30%), Gaps = 39/380 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++    +    +++   +K   A+KC     +   L +       +S  E+  
Sbjct: 87  FFICDLGEVKRLFNNW--VKELPRIKPFYAVKCNPDTKVLSLLAELGVNFDCASKVEIDR 144

Query: 66  GHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   +   Y    K        ++ + +     +     K K      ++ LRI  
Sbjct: 145 VLSMNISPDRIVYANPCKVASFIRYAASKNVMKSTFDNVEELHKIKKFHPESQLLLRIAT 204

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S ++  L+          +     I+    N+ G+ FH       F      +++   
Sbjct: 205 DDSTAQCRLSTKYGCEMENVDVLLKAIKELGLNLAGVSFHVGSGASDFTSLYKAVRDART 264

Query: 185 EFGH-----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-KYSVQIYLEPGEAIV 238
            F        +  ++ + +GGG  F             L+EF      V I  EPG   V
Sbjct: 265 VFDKAASEYGLPPLKILDVGGGFQFESFKESTAVLRLALEEFFPVGCGVDIIAEPGRYFV 324

Query: 239 TNTTTLNTTVLD----------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN---- 284
               TL + V+           I  N      ++  +  H   +         +      
Sbjct: 325 ATAFTLASHVIAKRKLSENEAMIYTNDGVYGNMNCILFDHQEPHPRTLYHNLDFHYNDFE 384

Query: 285 --------------TGPYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYNIN 329
                           PY   + G +C   D   + ++ +  V +GD   F  +  Y  +
Sbjct: 385 STTAVLDSINKTRSEYPYKVSIWGPTCDGLDCIAKEYYMKHDVIVGDWFYFPALGAYTSS 444

Query: 330 RKNWFNGI-NMPTIAVKNVD 348
               FNG      I   + +
Sbjct: 445 AATQFNGFEQTADIVYIDSE 464


>gi|13774332|gb|AAK38838.1| ornithine decarboxylase [Oculimacula yallundae]
          Length = 448

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 56/368 (15%), Positives = 107/368 (29%), Gaps = 31/368 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++        +      VK   A+KC     +   L     G   +S  E+  
Sbjct: 70  FFVADLGEVYR--QHMRWKLNLPRVKPFYAVKCNPDNRVIQLLAALGTGFDCASKAEIEQ 127

Query: 66  G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       Y    K        +N +       +     K K      ++ LRI+ 
Sbjct: 128 VIKADVDPSRIIYAQPCKTNSYVRYAANHNVKQMTFDNADELHKVKKLFPGAELFLRIST 187

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S S   L+          +      +    NV G+ FH        L +   +++   
Sbjct: 188 DDSSSLCRLSLKFGAAMDTTDGLLALAKELDLNVVGVSFHVGSGASDPLAYMRAVQDARL 247

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            F         +  + +GGG      +      C+ L  +   + + I  EPG   V++ 
Sbjct: 248 VFDQAAAHGFSLHTLDIGGGFVSESFEAMASVLCEALDTYMPSH-INIIGEPGRYYVSSA 306

Query: 242 TTLNTTVLD---------------ISENIKNLVIVDSSVEAHVPDY--------LLYQES 278
            ++   ++                I  N        S +  H              Y  +
Sbjct: 307 FSVACHIIARRTIVEPASSEKSYMIYLNDGLYGNFSSIMFDHQNPIAQVLRTGDRTYFNN 366

Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                +       + G +C   D   E   F+  + +GD + FE++  Y       FNG 
Sbjct: 367 IAAQDSVDGTEYSIWGPTCDGIDRISESIRFDHTLDVGDWLYFEEMGAYTKCSATRFNGF 426

Query: 338 NMPTIAVK 345
           +     + 
Sbjct: 427 SDAHEVIY 434


>gi|256545739|ref|ZP_05473095.1| diaminopimelate decarboxylase [Anaerococcus vaginalis ATCC 51170]
 gi|256398435|gb|EEU12056.1| diaminopimelate decarboxylase [Anaerococcus vaginalis ATCC 51170]
          Length = 393

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 54/381 (14%), Positives = 113/381 (29%), Gaps = 42/381 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y+  K+ +  +        +   ++ L ++K      +  T+ +   G+ ++S  EV+
Sbjct: 15  PCYIYQKEIIDKSCQKLQEKFE--NIEFLYSIKANPFMPVIKTIKENGIGSDAASSNEVL 72

Query: 65  L-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           L            Y+   K  E      +    I ++  +L+  +  A+   + + + I 
Sbjct: 73  LSIKAGMEKNQIYYSAPGKTMEDLQKAWDKCIFIADSFHELDLLEKLAKNHGEILEIGIR 132

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-NVNGLMFHNNCENKSFLCFSAMLKNI 182
            + +YS       +  F    +K      +     + GL  H   +       S   KN 
Sbjct: 133 VNPNYSMTDKKAHSSKFGIDEDKIFSFDWTYKNLKLVGLHVHVQSQILDTNLLSNYYKNT 192

Query: 183 EKEFGHF----ITQIEWISLGGGIHFTDKDYPVKD---------FCQRLKEFSEKYSVQI 229
                 F       I++I+ G GI          D              ++   +   + 
Sbjct: 193 YDLAVKFSKLSHADIKFINFGSGIGVAYDKKNEDDVNLDILAKTMKDLYEKNKNELGAKF 252

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLV------------------------IVDSSV 265
            +E G  +V ++ T  T ++D   +                                   
Sbjct: 253 LIESGRFLVMDSGTYYTPIIDKKYSNGKTYLVVKNAMNGFVKGPMKEMLKQALGYECKKA 312

Query: 266 EAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
              +       E   I  N+      + G  C + D+       K   IGD +   +   
Sbjct: 313 FEPLYTGKNQCEFEIIGENSQKEIVDIGGHLCTSLDLLASDIELKKANIGDILKVSNAGA 372

Query: 326 YNINRKN-WFNGINMPTIAVK 345
           Y  +     F   ++P   + 
Sbjct: 373 YCFSLSILHFASHDLPKEFLI 393


>gi|38637786|ref|NP_942760.1| putative diaminopimelate decarboxylase [Ralstonia eutropha H16]
 gi|32527124|gb|AAP85874.1| putative diaminopimelate decarboxylase [Ralstonia eutropha H16]
          Length = 416

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 53/369 (14%), Positives = 107/369 (28%), Gaps = 36/369 (9%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66
           Y+ D + L  +           G +L  A+K  +   +  TL     G   SS  E+   
Sbjct: 35  YVYDLEALRRHATATARGLP-PGFELFYAIKANSDLPILQTLAPLAHGFEISSGGELAWV 93

Query: 67  HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK--LHKKIGLRI 122
            E F      ++   K     A       + +   ++ +L +    A+   +   + LR+
Sbjct: 94  REHFADVPLIFSGPGKTDAELAGALELGVEALHVESLHELERLAWLARARGVTAPVLLRV 153

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENKSFLCF 175
           N ++   +          +  G                    + G  FH           
Sbjct: 154 NLAIEGLQATTLMMGGKPTPFGIAGDQLPACLAWLRAHPEIRLRGFHFHLMSHQLDAAAH 213

Query: 176 SAMLKNIEKEFGHF-----ITQIEWISLGGGIHFTD----KDYPVKDFCQRL-KEFSEKY 225
             +L    ++   +     +  ++ +++GGGI        + +    F + L    +++ 
Sbjct: 214 LRLLDAYLQQVRRWRAEYGLDTLDQVNVGGGIGVNYREPERQFDWAGFAEGLPALSAQRD 273

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284
            + + LE G  I          V+D+        +V      H    Y            
Sbjct: 274 GLTVRLECGRYITAFCGYYAMEVIDVKHAFDRAFVVACGGTHHFRTPYAQGHSHPFRVLP 333

Query: 285 TGPYTAM------------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
              +               V G+ C   D+  +      V+ GD + F     Y  +  +
Sbjct: 334 VESWRYPFARPGVRDARVSVVGQLCTPKDVLAQDAPVDSVRAGDMVVFPYAGAYAWHISH 393

Query: 333 W-FNGINMP 340
             F     P
Sbjct: 394 HDFLRHPHP 402


>gi|118472318|ref|YP_890417.1| diaminopimelate decarboxylase [Mycobacterium smegmatis str. MC2
           155]
 gi|118173605|gb|ABK74501.1| diaminopimelate decarboxylase [Mycobacterium smegmatis str. MC2
           155]
          Length = 459

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 59/396 (14%), Positives = 110/396 (27%), Gaps = 39/396 (9%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLL-LALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66
           +ID   L   + +           L  +A K  +   +         G   +S  E+ L 
Sbjct: 44  VIDLDTLDELMASLHAAYPADLPALHTIAAKAISLRPVLARFAAAGFGCEVASPGELELA 103

Query: 67  HE-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA---QKLHKKIGLR 121
               F  E   + + A    EI   L    +   +   +L +         +    IG+R
Sbjct: 104 LAAGFPAERIVFDSPAKTPTEIARALELGVSFNVDNFEELARIDAAVARNGRPRSVIGVR 163

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKI------ESEIKNVNGLMFHNNCENKSFLCF 175
           +NP                S+ G    D         +    +  L  H+  +  S    
Sbjct: 164 VNPQTGAGTIDAMSTATSTSKFGIGLADHRDEIIDAFATRPWLTQLHVHSGSQGMSLEHA 223

Query: 176 SAMLKNIEKEFGHFI-----TQIEWISLGGGIHFTDKDYPVKDFCQ-------RLKEFSE 223
           +  ++                QI+ I +GGG+    +   V                   
Sbjct: 224 AEGVRLTTDLAADIDARAGSRQIQRIDVGGGLPVNFRSDDVTPTFADHRAALQAAAPRLF 283

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDI------SENIKNLVIVDSSVEAHVPDYLLYQE 277
             +  +  E G A+     T+   V            I +  +  ++     P+    + 
Sbjct: 284 DGTYTVVTEFGRALTAKAGTVVARVEYTKVTGGRPIAITHAGVQVATRSIFAPEAWPLRV 343

Query: 278 ----SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
               +     +  P    V G +C  GD+        PV  GD ++  D  GY  +    
Sbjct: 344 EVYDAHGRRRDDPPRVQDVAGPACFTGDMLAVGRELPPVHAGDLVAVPDTGGYYFSTHFS 403

Query: 334 FNGINMPTIAVK----NVDGTIKAIRE-FSYNDYYN 364
           +N +  P +       + D      R   +      
Sbjct: 404 YNALPRPAVYTVGTDQHGDRRWSLARRAQTIEQIVA 439


>gi|159481612|ref|XP_001698872.1| ornithine decarboxylase 2 [Chlamydomonas reinhardtii]
 gi|158273364|gb|EDO99154.1| ornithine decarboxylase 2 [Chlamydomonas reinhardtii]
          Length = 535

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 52/363 (14%), Positives = 96/363 (26%), Gaps = 34/363 (9%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66
           Y++D                   V    A+KC+    +   L     G   +S  E+ + 
Sbjct: 140 YVVDLASPFRLFKAWRAAMPR--VLPYYAVKCYPEPAILKLLMALGAGFDCASKGELDMM 197

Query: 67  HE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPS 125
            +         +    K                   S     K        K  LRI   
Sbjct: 198 LKLGVSPGRIIFAHPCKRGADFRYAREHGITYTTFDSSSELHKIAEMDPEFKCVLRIRAD 257

Query: 126 VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKE 185
              ++  L                + +     V G+ FH     K+   F+  + N  K 
Sbjct: 258 DPGARVPLGLKYGAEVEEAAGLLAEAKQLGLEVVGVSFHVGSAAKNLATFTNAIANARKV 317

Query: 186 FGH---FITQIEWISLGGG---IHFTDKDYPVKDFCQRLKEFSEKYSVQ--------IYL 231
           F        ++E + +GGG         +    +    +      Y           +  
Sbjct: 318 FDDAAGMGFKMELLDIGGGFTGHFDECGNVMFGEIANTINAALATYFPPGGDLGDVRVIA 377

Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSV----------EAHVPDYLLYQES--- 278
           EPG      ++TL T V+   +  +                      V D    +     
Sbjct: 378 EPGRYFAETSSTLMTVVIGQRDRPQKDGSTHKDYWLTDGLYGSFNCIVYDGQNPEWRIVR 437

Query: 279 ----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        Y + + G +C + D+  +      ++ GD + + +   Y +     F
Sbjct: 438 SPILPDPADAKTTYVSTLWGPTCDSADVVYKDVALPELRNGDWLLWPNAGAYTVAGACDF 497

Query: 335 NGI 337
           NGI
Sbjct: 498 NGI 500


>gi|296158669|ref|ZP_06841499.1| Diaminopimelate decarboxylase [Burkholderia sp. Ch1-1]
 gi|295891237|gb|EFG71025.1| Diaminopimelate decarboxylase [Burkholderia sp. Ch1-1]
          Length = 477

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 57/405 (14%), Positives = 123/405 (30%), Gaps = 53/405 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           P Y+I + +L +               V++L A K      +   LNQ   G     + E
Sbjct: 50  PLYIISENELRDRYRAFRDGFLAHYPQVEILFANKSNNGLAIRHILNQEGAGGDCFGVNE 109

Query: 63  VMLGH-EKFGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           + +        +         +D E++  ++N   +  + + +L++    +++L +K+ +
Sbjct: 110 MYIALLAGTDPQKLVLNGSNKQDEELEMAIANGICVNIDAMDELDRIDVISKRLGRKVAI 169

Query: 121 RIN-----------PSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLM 162
            I              V+             ++ G   +          +     +    
Sbjct: 170 GIRLKLDLLPLAGRTGVAMHGPGTLKEQSDSTKWGMTREQTVDIVKRAQKMANIELKETH 229

Query: 163 FHNNCENKSFLCFSAMLKNIEKE----FGHFITQIEWISLGGGIHFTDKDYPVKD----- 213
           FH +  +     F+ M + +                 I +GGG  F              
Sbjct: 230 FHLSRMSNDPENFAIMAREMIVWSGFLRDETGWTPPCIDIGGGWTFGKWYGTGPRSQIDD 289

Query: 214 ------------FCQRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
                           + E +E+      ++ +EPG AI   +      V  I +     
Sbjct: 290 SAAPTPDIYGRLCGAAICEEAERLKLPLPKLRIEPGRAISGPSGVAVGQVGAIKQGASKK 349

Query: 259 VIVDSSVEAHV-----PDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313
            +       H+      D+  +  +             + G  C + D  G       ++
Sbjct: 350 WVNLDLSTNHLSWASALDWYYHAVAVKDTGREANDHVDLVGPLCNS-DEVGADRVMPLLE 408

Query: 314 IGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-GTIKAIREF 357
            GD ++F D  GY  +    +N   +P   + + D   +  +RE 
Sbjct: 409 RGDFVAFLDAGGYTESGAARYNAQLLPATVLVSGDTAEVTTVREQ 453


>gi|162147147|ref|YP_001601608.1| ornithine decarboxylase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161785724|emb|CAP55295.1| putative ornithine decarboxylase [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 441

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 52/357 (14%), Positives = 104/357 (29%), Gaps = 27/357 (7%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP  ++D  ++     +          ++  A+K   A  +   L        ++S  E+
Sbjct: 81  TPCLVVDVDRVEARYQSLRAALPL--ARIYYAVKANPAPAILRRLVSLGSAFDAASWEEI 138

Query: 64  MLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            L       G   ++            A  +      F+++ +L K    A        L
Sbjct: 139 RLCLAAGAAGADISFGNTVKKASAIAQAHQAGVTMFAFDSIEELEKLARHAPGSRVYCRL 198

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
            +    +             S      + +         GL FH   +  S   + A + 
Sbjct: 199 IVENEGAEWPLSRKFGTTLDSARDLMLRARDMGLDP--YGLSFHVGSQQTSTDAYEAAIA 256

Query: 181 NIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDF------CQRLKEFSEKYSVQIYL 231
            +   F         +  ++LGGG     ++   +           + E       ++ +
Sbjct: 257 RVGMLFTDLAAAGLNLRMVNLGGGFPIRYREDVPEIDRFAVAISHAMTEHFGNDLPEMIV 316

Query: 232 EPGEAIVTNTTTLNTTVLDI----SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287
           EPG  IV +   +++ V+ +     ++    V +D      + +         I      
Sbjct: 317 EPGRFIVGDAGVVSSEVVLVTRRGQQDGPRWVYLDIGRFGGLAETEGESIRYGIRTPHDG 376

Query: 288 YT---AMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINR-KNWFNGI 337
                  + G +C   DI  E   +     +  GDRI       Y        FNG 
Sbjct: 377 SPAGRVAIAGPTCDGADIMYEKAPYALPLDLACGDRIELLSTGAYVSTYCSTSFNGF 433


>gi|207343677|gb|EDZ71070.1| YKL184Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 466

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 57/380 (15%), Positives = 114/380 (30%), Gaps = 39/380 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++    +    +++   +K   A+KC     +   L +       +S  E+  
Sbjct: 87  FFICDLGEVKRLFNNW--VKELPRIKPFYAVKCNPDTKVLSLLAELGVNFDCASKVEIDR 144

Query: 66  GHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   +   Y    K        ++ + +     +     K K      ++ LRI  
Sbjct: 145 VLSMNISPDRIVYANPCKVASFIRYAASKNVMKSTFDNVEELHKIKKFHPESQLLLRIAT 204

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S ++  L+          +     I+    N+ G+ FH       F      +++   
Sbjct: 205 DDSTAQCRLSTKYGCEMENVDVLLKAIKELGLNLAGVSFHVGSGASDFTSLYKAVRDART 264

Query: 185 EFGH-----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-KYSVQIYLEPGEAIV 238
            F        +  ++ + +GGG  F             L+EF      V I  EPG   V
Sbjct: 265 VFDKAANEYGLPPLKILDVGGGFQFESFKESTAVLRLALEEFFPVGCGVDIIAEPGRYFV 324

Query: 239 TNTTTLNTTVLD----------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN---- 284
               TL + V+           I  N      ++  +  H   +         +      
Sbjct: 325 ATAFTLASHVIAKRKLSENEAMIYTNDGVYGNMNCILFDHQEPHPRTLYHNLEFHYNDFE 384

Query: 285 --------------TGPYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYNIN 329
                           PY   + G +C   D   + ++ +  V +GD   F  +  Y  +
Sbjct: 385 STTAVLDSINKTRSEYPYKVSIWGPTCDGLDCIAKEYYMKHDVIVGDWFYFPALGAYTSS 444

Query: 330 RKNWFNGI-NMPTIAVKNVD 348
               FNG      I   + +
Sbjct: 445 AATQFNGFEQTADIVYIDSE 464


>gi|190409659|gb|EDV12924.1| ornithine decarboxylase [Saccharomyces cerevisiae RM11-1a]
          Length = 466

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 57/380 (15%), Positives = 114/380 (30%), Gaps = 39/380 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++    +    +++   +K   A+KC     +   L +       +S  E+  
Sbjct: 87  FFICDLGEVKRLFNNW--VKELPRIKPFYAVKCNPDTKVLSLLAELGVNFDCASKVEIDR 144

Query: 66  GHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   +   Y    K        ++ + +     +     K K      ++ LRI  
Sbjct: 145 VLSMNISPDRIVYANPCKVASFIRYAASKNVMKSTFDNVEELHKIKKFHPESQLLLRIAT 204

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S ++  L+          +     I+    N+ G+ FH       F      +++   
Sbjct: 205 DDSTAQCRLSTKYGCEMENVDVLLKAIKELGLNLAGVSFHVGSGASDFTSLYKAVRDART 264

Query: 185 EFGH-----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-KYSVQIYLEPGEAIV 238
            F        +  ++ + +GGG  F             L+EF      V I  EPG   V
Sbjct: 265 VFDKAANEYGLPPLKILDVGGGFQFESFKESTAVLRLALEEFFPVGCGVDIIAEPGRYFV 324

Query: 239 TNTTTLNTTVLD----------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN---- 284
               TL + V+           I  N      ++  +  H   +         +      
Sbjct: 325 ATAFTLASHVIAKRKLSENEAMIYTNDGVYGNMNCILFDHQEPHPRTLYHNLEFHYNDFE 384

Query: 285 --------------TGPYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYNIN 329
                           PY   + G +C   D   + ++ +  V +GD   F  +  Y  +
Sbjct: 385 STTAVLDSINKTRSEYPYKVSIWGPTCDGLDCIAKEYYMKHDVIVGDWFYFPALGAYTSS 444

Query: 330 RKNWFNGI-NMPTIAVKNVD 348
               FNG      I   + +
Sbjct: 445 AATQFNGFEQTADIVYIDSE 464


>gi|114045955|ref|YP_736505.1| ornithine decarboxylase [Shewanella sp. MR-7]
 gi|113887397|gb|ABI41448.1| ornithine decarboxylase [Shewanella sp. MR-7]
          Length = 391

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 54/358 (15%), Positives = 116/358 (32%), Gaps = 26/358 (7%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+ +ID   +    D  +     A   +  A+K   A  +   L         +S+YE+
Sbjct: 30  TPFVVIDTNIIAKQYDDMVNSFPYAD--VYYAVKANPAAEILTLLKNKGSNFDIASIYEL 87

Query: 64  MLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
            +  +     +  +Y    K  +           ++ + S+ +  +  A++         
Sbjct: 88  DMVTNVGVTPDRVSYGNTIKKRQDVRAFYERGVRMYASDSEAD-LRMIAEEAPGSRIYVR 146

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLK 180
             +            +   +     +  + ++   +   G+ FH   + +    + + + 
Sbjct: 147 ILTEGTDTADWPLSRKFGCQNEMAYELLVLAKELGLEPFGISFHVGSQQRDIGAWDSAIG 206

Query: 181 NIEKEF----GHFITQIEWISLGGGIHFTDKDYPVK------DFCQRLKEFSEKYSVQIY 230
            ++  F          ++ I++GGG      D   +           LKE       QI 
Sbjct: 207 KVKSIFDRLRDEHNIVLKMINMGGGFPANYIDKTNQLGVYAEQITHFLKEDFGDDLPQII 266

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATIYPNT 285
           LEPG ++++N   L + V+ IS+         +          +       +        
Sbjct: 267 LEPGRSLISNAGVLVSEVVLISKKSYTALERWVFTDVGKFSGLIETMDEAIKFPIFTHKQ 326

Query: 286 GP-YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338
           G     ++ G +C + DI  E   +     + IGDR+ +     Y        FNG  
Sbjct: 327 GELDKCVIAGPTCDSADIMYEHYSYGLPNDLAIGDRMYWLTAGAYTTTYSAVCFNGFP 384


>gi|333026994|ref|ZP_08455058.1| putative diaminopimelate decarboxylase [Streptomyces sp. Tu6071]
 gi|332746846|gb|EGJ77287.1| putative diaminopimelate decarboxylase [Streptomyces sp. Tu6071]
          Length = 494

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 55/396 (13%), Positives = 111/396 (28%), Gaps = 40/396 (10%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLL-LALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67
           +D   +                 L   A+K  +   + + LN+   G   +S  E+ L  
Sbjct: 78  VDVTGVREAARELRAAFAGPAPVLHTFAVKAASLVPVLELLNEEGVGCEVASPGELELAR 137

Query: 68  E-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKIGLRIN 123
                       + A    E+   L++   +  +   +L +             +G+R+N
Sbjct: 138 AAGVPASRIVLDSPAKTVAELRDALAHGIAVNADNPQELARIDALLAEGPTDSPLGVRVN 197

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFHNNCE----NKS 171
           P V              S+ G   +D        +   E   +  L  H   +       
Sbjct: 198 PQVGTGSIGAMSTATATSKFGVALRDPGAEDWLVRQYVERPWLTRLHTHTGSQGVALELM 257

Query: 172 FLCFSAMLKNIEKEFGHFITQ-IEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY----- 225
                 +    E+       Q ++ I +GGG+    +   +        +   +      
Sbjct: 258 AESVRIVYGLAERINREVGRQQVDTIDIGGGLPVNFEGEEITPRFAAYAKLLRETVPGLF 317

Query: 226 --SVQIYLEPGEAIVTNTTTLNTTVLDISEN------IKNLVIVDSSVEAHVPDYLLYQE 277
                I  E G +++     +   V     +      + +     ++    VPD    + 
Sbjct: 318 DGRYTIVTEFGRSLLAKQGFVAALVEYTKTSGGRRIAVTHAGAQVATRTVFVPDSWPLRV 377

Query: 278 SATIYPNTGPYTAMVC----GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
           +A     T   +  +     G  C AGD+         +  GD I+  D   Y  +    
Sbjct: 378 AAFASDGTLKESPDLVQDVAGPCCFAGDLVARARTLPELSPGDLIALWDTGAYYFSTHFA 437

Query: 334 FNGINMPTI-AVKNVDGTI----KAIREFSYNDYYN 364
           +N +  P +      D          R  S  +   
Sbjct: 438 YNSLPRPAVHGFWTDDEGRTRFATIRRGQSLAELLA 473


>gi|319891631|ref|YP_004148506.1| Siderophore staphylobactin biosynthesis protein SbnH
           [Staphylococcus pseudintermedius HKU10-03]
 gi|317161327|gb|ADV04870.1| Siderophore staphylobactin biosynthesis protein SbnH
           [Staphylococcus pseudintermedius HKU10-03]
          Length = 400

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 46/379 (12%), Positives = 102/379 (26%), Gaps = 36/379 (9%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66
           ++ D   L  +L+T      +   ++  A+K  +   +   +  ++ G   +S  E+   
Sbjct: 20  FIYDMDGLRQHLETVTSQLPD-NCEMYYAMKANSESEILAAIQPHVAGFEVASEGEIAKA 78

Query: 67  HEKFGGE-THAYNVAYKDCEIDA-VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                 E          D  +   +      I   ++ +L +     ++ +  + + +  
Sbjct: 79  LVHTTAEHVIFGGPGKTDESLRYAIQQGIRRIHVESLYELERLNALLKQENATMSILLRV 138

Query: 125 S-VSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCEN----KSF 172
           +                ++ G                    + G  FH+   N       
Sbjct: 139 NLAGPFPAATLHMAGQPTQFGIDETEVDTVIATAQNMPRIQLEGFHFHSISNNLDAALHL 198

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSVQ 228
              +   +  +         ++ +++GGGI        + +    F   L    E+  +Q
Sbjct: 199 QVMTLYFQKAKAWAAQHDFTLQHLNVGGGIGVNYADLNEQFDWTYFTTELSALIEEEGLQ 258

Query: 229 IY---LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPN 284
                 E G  +V +     T VLDI         +      H                 
Sbjct: 259 NITINFECGRYMVAHIGYYVTEVLDIKRVHGAWFAILKGGTQHFRLPVSWQHNHPFEILP 318

Query: 285 TGP------------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
            G                   G+ C   D+F +      +  GD + F     Y  +  +
Sbjct: 319 LGEQANQIAPRTIEQQAVTFVGQLCTPKDVFAKAVELLALSTGDAVIFIYAGAYGWSISH 378

Query: 333 W-FNGINMPTIAVKNVDGT 350
             F     P     + +  
Sbjct: 379 HDFLSHPHPQCIYWSSEKE 397


>gi|6322664|ref|NP_012737.1| Spe1p [Saccharomyces cerevisiae S288c]
 gi|118385|sp|P08432|DCOR_YEAST RecName: Full=Ornithine decarboxylase; Short=ODC
 gi|172070|gb|AAA34829.1| ornithine decarboxylase [Saccharomyces cerevisiae]
 gi|395241|emb|CAA52254.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|486325|emb|CAA82027.1| SPE1 [Saccharomyces cerevisiae]
 gi|285813085|tpg|DAA08982.1| TPA: Spe1p [Saccharomyces cerevisiae S288c]
          Length = 466

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 57/380 (15%), Positives = 114/380 (30%), Gaps = 39/380 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++    +    +++   +K   A+KC     +   L +       +S  E+  
Sbjct: 87  FFICDLGEVKRLFNNW--VKELPRIKPFYAVKCNPDTKVLSLLAELGVNFDCASKVEIDR 144

Query: 66  GHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   +   Y    K        ++ + +     +     K K      ++ LRI  
Sbjct: 145 VLSMNISPDRIVYANPCKVASFIRYAASKNVMKSTFDNVEELHKIKKFHPESQLLLRIAT 204

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S ++  L+          +     I+    N+ G+ FH       F      +++   
Sbjct: 205 DDSTAQCRLSTKYGCEMENVDVLLKAIKELGLNLAGVSFHVGSGASDFTSLYKAVRDART 264

Query: 185 EFGH-----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-KYSVQIYLEPGEAIV 238
            F        +  ++ + +GGG  F             L+EF      V I  EPG   V
Sbjct: 265 VFDKAANEYGLPPLKILDVGGGFQFESFKESTAVLRLALEEFFPVGCGVDIIAEPGRYFV 324

Query: 239 TNTTTLNTTVLD----------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN---- 284
               TL + V+           I  N      ++  +  H   +         +      
Sbjct: 325 ATAFTLASHVIAKRKLSENEAMIYTNDGVYGNMNCILFDHQEPHPRTLYHNLEFHYDDFE 384

Query: 285 --------------TGPYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYNIN 329
                           PY   + G +C   D   + ++ +  V +GD   F  +  Y  +
Sbjct: 385 STTAVLDSINKTRSEYPYKVSIWGPTCDGLDCIAKEYYMKHDVIVGDWFYFPALGAYTSS 444

Query: 330 RKNWFNGI-NMPTIAVKNVD 348
               FNG      I   + +
Sbjct: 445 AATQFNGFEQTADIVYIDSE 464


>gi|151941735|gb|EDN60096.1| ornithine decarboxylase [Saccharomyces cerevisiae YJM789]
 gi|323336859|gb|EGA78121.1| Spe1p [Saccharomyces cerevisiae Vin13]
 gi|323354229|gb|EGA86073.1| Spe1p [Saccharomyces cerevisiae VL3]
          Length = 466

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 57/380 (15%), Positives = 114/380 (30%), Gaps = 39/380 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++    +    +++   +K   A+KC     +   L +       +S  E+  
Sbjct: 87  FFICDLGEVKRLFNNW--VKELPRIKPFYAVKCNPDTKVLSLLAELGVNFDCASKVEIDR 144

Query: 66  GHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   +   Y    K        ++ + +     +     K K      ++ LRI  
Sbjct: 145 VLSMNISPDRIVYANPCKVASFIRYAASKNVMKSTFDNVEELHKIKKFHPESQLLLRIAT 204

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S ++  L+          +     I+    N+ G+ FH       F      +++   
Sbjct: 205 DDSTAQCRLSTKYGCEMENVDVLLKAIKELGLNLAGVSFHVGSGASDFTSLYKAVRDART 264

Query: 185 EFGH-----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-KYSVQIYLEPGEAIV 238
            F        +  ++ + +GGG  F             L+EF      V I  EPG   V
Sbjct: 265 VFDKAANEYGLPPLKILDVGGGFQFESFKESTAVLRLALEEFFPVGCGVDIIAEPGRYFV 324

Query: 239 TNTTTLNTTVLD----------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN---- 284
               TL + V+           I  N      ++  +  H   +         +      
Sbjct: 325 ATAFTLASHVIAKRKLSENEAMIYTNDGVYGNMNCILFDHQEPHPRTLYHNLEFHYNDFE 384

Query: 285 --------------TGPYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYNIN 329
                           PY   + G +C   D   + ++ +  V +GD   F  +  Y  +
Sbjct: 385 STTAVLDSINKTRSEYPYKVSIWGPTCDGLDCIAKEYYMKHDVIVGDWFYFPALGAYTSS 444

Query: 330 RKNWFNGI-NMPTIAVKNVD 348
               FNG      I   + +
Sbjct: 445 AATQFNGFEQTADIVYIDSE 464


>gi|24375622|ref|NP_719665.1| decarboxylase, pyridoxal-dependent [Shewanella oneidensis MR-1]
 gi|24350523|gb|AAN57109.1|AE015844_11 decarboxylase, pyridoxal-dependent [Shewanella oneidensis MR-1]
          Length = 391

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 54/358 (15%), Positives = 114/358 (31%), Gaps = 26/358 (7%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+ +ID   +    D  +     A   +  A+K   A  +   L         +S+YE+
Sbjct: 30  TPFVVIDTSIIAKQYDDMVNSFPYAD--VYYAVKANPAAEILTLLKDKGSNFDIASIYEL 87

Query: 64  MLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
            +        +  +Y    K  +           ++ + S+ +  +  A++         
Sbjct: 88  DMVMNVGVTADRVSYGNTIKKRQDVRAFYERGVRMYASDSEAD-LRMIAEEAPGSRIYVR 146

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLK 180
             +            +   +     +  + +    +   G+ FH   + +    + + + 
Sbjct: 147 ILTEGTDTADWPLSRKFGCQNEMAYELLVLANELGLEPYGISFHVGSQQRDIGAWDSAIG 206

Query: 181 NIEKEF----GHFITQIEWISLGGGIHFTDKDYPVK------DFCQRLKEFSEKYSVQIY 230
            ++  F          ++ I++GGG      D   +           LKE       QI 
Sbjct: 207 KVKSIFDRLRDEHNIVLKMINMGGGFPANYIDKTNQLGVYAEQITHFLKEDFGDDLPQII 266

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATIYPNT 285
           LEPG ++++N   L + V+ IS+         +          +       +        
Sbjct: 267 LEPGRSLISNAGVLVSEVVLISKKSYTALERWVFTDVGKFSGLIETMDEAIKFPIFTHKQ 326

Query: 286 GP-YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338
           G     ++ G +C + DI  E   +     + IGDR+ +     Y        FNG  
Sbjct: 327 GELEKCVIAGPTCDSADIMYEHYSYGLPNDLAIGDRMYWLTAGAYTTTYSAVCFNGFP 384


>gi|114800350|ref|YP_761668.1| decarboxylase, group IV [Hyphomonas neptunium ATCC 15444]
 gi|114740524|gb|ABI78649.1| decarboxylase, group IV [Hyphomonas neptunium ATCC 15444]
          Length = 398

 Score =  139 bits (350), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 43/363 (11%), Positives = 97/363 (26%), Gaps = 25/363 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEV 63
           P Y    +++       +        +   A+K   A  + D L +       ++S  E+
Sbjct: 19  PTYCFRPERVTAAASWFVEKFP---AQPFYAVKVNPAPHVLDALWEGGIRSFDAASEKEI 75

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAV---LSNCDTIIFNTVSQLNKF---KDKAQKLHKK 117
            L   +F     A+    K                 + +++++L+K     D A+ L   
Sbjct: 76  ELIRGRFPDARIAFLHPVKPRRAIERAYKQHGVRIFVTDSMAELHKILDATDFAKDLTIL 135

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
           + + ++   S                      +  ++   V    FH   +      ++ 
Sbjct: 136 VRIAVSNEGSALPLSGKFGASAAEAAELLSVARRYADELGV---SFHVGSQAMKPSAWAQ 192

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI 237
            + +  +        ++ + +GGG      D         +      +     LE  +  
Sbjct: 193 AMADASRVIIDAGVTVDIVDVGGGFPAIYADKNPPAMDDYVAMVMRSFENMFVLENADLW 252

Query: 238 VTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP---------- 287
                 L      +   +         +       L                        
Sbjct: 253 CEPGRALVAEAESLLVGVDLAKDNAIYINEGSYGALYDAVHENWVFPMRAISGDGRKLGR 312

Query: 288 -YTAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
                V G +C + D+  G+      +  GD I   ++  Y  +    FNG     +A+ 
Sbjct: 313 MVEYTVYGPTCDSADMLPGKVWLPAGLTEGDYIEIGNIGAYGRSMATRFNGFGESDVAIV 372

Query: 346 NVD 348
              
Sbjct: 373 QDS 375


>gi|29833865|ref|NP_828499.1| diaminopimelate decarboxylase [Streptomyces avermitilis MA-4680]
 gi|29610990|dbj|BAC75034.1| putative diaminopimelate decarboxylase [Streptomyces avermitilis
           MA-4680]
          Length = 408

 Score =  139 bits (350), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 51/375 (13%), Positives = 102/375 (27%), Gaps = 40/375 (10%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y+ D  +L  +            V+L  A K      +   L  Y+DG   +S  E+ 
Sbjct: 21  PAYVYDLAELRAHAAGVRAALPER-VELYYAAKANPEPEILAALAPYVDGYEVASGGELA 79

Query: 65  LGHEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
              +   G   A+       D    A+          +  +L+   ++A+++     + +
Sbjct: 80  HVAQAVPGRPLAFGGPGKTPDEVAAALAGGVQRFHVESEYELHMLAEQARRVTPGTRVAV 139

Query: 123 NPSV------SYSKFILADPNRPFSRLGEKCKDK---------IESEIKNVNGLMFHNNC 167
            P                      +  G                      + G+  H   
Sbjct: 140 LPRFNLPVRDGSLAGSALAMGGRPTPFGLDPAQAGTVLRLLTDGTYPHLELRGVHAHLAS 199

Query: 168 ENKSFLC---FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK----DYPVKDFCQRLKE 220
             ++         ++       G     +  +++GGG+          +    + + L  
Sbjct: 200 GLEAPEQLAVAETVVGWATDMAGEHGVGLGEVNVGGGMTVDYAAPERRFDWVTYGKGLAR 259

Query: 221 FSEKYSVQIY-LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQ-- 276
            +  +      +EPG A+        T VLD+  +      V      H+          
Sbjct: 260 LAHAHPELTLRIEPGRALTAYCGWYATEVLDVKRSHGEEFAVVRGGTHHLRTPATKGHDQ 319

Query: 277 ----------ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
                           P        + G+ C   D+         ++ GDR++F     Y
Sbjct: 320 PCSVLPVDGWPHPWPRPAAEAERVTLTGQLCTPKDVLARQVPAGGLRAGDRVAFALAGAY 379

Query: 327 NINRKNW-FNGINMP 340
             N  +  F     P
Sbjct: 380 AWNISHHDFLMHPRP 394


>gi|307545925|ref|YP_003898404.1| diaminopimelate decarboxylase [Halomonas elongata DSM 2581]
 gi|307217949|emb|CBV43219.1| putative diaminopimelate decarboxylase [Halomonas elongata DSM
           2581]
          Length = 420

 Score =  139 bits (350), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 48/378 (12%), Positives = 100/378 (26%), Gaps = 34/378 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            +  D   L              GV+L  A+K  +   + DTL   +DG   SS  E+  
Sbjct: 28  AFFYDLPALAAQGSAMKAALP-PGVELYYAIKANSEAAIIDTLAPVVDGLELSSGGEIER 86

Query: 66  GHEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                       +     D ++ A ++         ++ ++ + +  A  L +   + + 
Sbjct: 87  ACACSTPRPWVLSGPGKLDSDMRAAMTRGVEAFHVESLGEVARLQTIAASLDRVQPVLVR 146

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDK---------IESEIKNVNGLMFHNNCENKSFLC 174
            + S  + + +      +       +           ++    + G   H     K    
Sbjct: 147 INPSLPEDLSSRLRMAGTATPFGIDEAQLADAVRAVDDAPNLALVGFHVHAMSHQKCERR 206

Query: 175 FSA------MLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK 224
                          +       Q+  +++GGGI        + +     C+ L++    
Sbjct: 207 HQRLLASYLERWPRWRALARHPEQVIQLNVGGGIGVNYLQPSEQFDWPGLCRALEQRLAA 266

Query: 225 YSVQIY--LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATI 281
                    E G  +          V+D   +     +V                +   I
Sbjct: 267 MHEPPLVRFEIGRFLSAFCGYYAIEVIDTKVSHGEGFLVCRGGTHQFRLPAAQGHDHPVI 326

Query: 282 YPNTGP--------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN- 332
           +    P            V G+ C   D+       + V+ GD +       Y  N  + 
Sbjct: 327 HLPRTPRRALGGESRPWTVVGQLCTPKDVLSRRQELQGVEAGDLLVLPLAGAYGYNISHA 386

Query: 333 WFNGINMPTIAVKNVDGT 350
            F     P          
Sbjct: 387 DFLCHPRPDQVFVRESRE 404


>gi|160873608|ref|YP_001552924.1| diaminopimelate decarboxylase [Shewanella baltica OS195]
 gi|160859130|gb|ABX47664.1| Diaminopimelate decarboxylase [Shewanella baltica OS195]
 gi|315265837|gb|ADT92690.1| Orn/DAP/Arg decarboxylase 2 [Shewanella baltica OS678]
          Length = 391

 Score =  139 bits (350), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 54/358 (15%), Positives = 115/358 (32%), Gaps = 26/358 (7%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+ +ID   +    D  +     A   +  A+K   A  +   L         +S+YE+
Sbjct: 30  TPFVVIDTSIIAKQYDDMVNSFPYAN--VYYAVKANPAAEILSLLKDKGSNFDIASIYEL 87

Query: 64  MLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
            +        +  +Y    K  +           ++ + S+ +  +  A++         
Sbjct: 88  DMVMNVGVTTDRVSYGNTIKKRQDVRAFYERGVRMYASDSEAD-LRMIAEEAPGSRIYVR 146

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLK 180
             +            +   +     +  + ++   +   G+ FH   + +    + + + 
Sbjct: 147 ILTEGTDTADWPLSRKFGCQNEMAYELLVLAQELGLEPFGISFHVGSQQRDIGAWDSAIG 206

Query: 181 NIEKEF----GHFITQIEWISLGGGIHFTDKDYPVK------DFCQRLKEFSEKYSVQIY 230
            ++  F          ++ I++GGG      D   +           LKE       QI 
Sbjct: 207 KVKSIFDRLRDEHNITLKMINMGGGFPANYIDKTNQLGVYAEQITHFLKEDFGDDLPQII 266

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATIYPNT 285
           LEPG ++++N   L + V+ IS+         +          +       +        
Sbjct: 267 LEPGRSLISNAGILVSEVVLISKKSYTALERWVFTDVGKFSGLIETMDEAIKFPIYTDRQ 326

Query: 286 GP-YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338
           G     ++ G +C + DI  E   +     + IGDR+ +     Y        FNG  
Sbjct: 327 GELDKCVIAGPTCDSADIMYEHYSYGLPNDLAIGDRMYWLTAGAYTTTYSAVCFNGFP 384


>gi|315506498|ref|YP_004085385.1| orn/dap/arg decarboxylase 2 [Micromonospora sp. L5]
 gi|315413117|gb|ADU11234.1| Orn/DAP/Arg decarboxylase 2 [Micromonospora sp. L5]
          Length = 415

 Score =  139 bits (349), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 59/389 (15%), Positives = 105/389 (26%), Gaps = 37/389 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y  D  ++  +  T +        +L  +LK      +   L+         S  E
Sbjct: 7   DTPAYRYDLARVRASHATLVAALPAP-SRLFYSLKANPHPALVAALHTAGCDAEICSPGE 65

Query: 63  VMLG-HEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI- 118
           +         G+   Y     +D E+   +         ++ + L++    A     ++ 
Sbjct: 66  LAAALRAGVPGDRMLYTGPGKRDAEVTEAVRGGVRWFSVDSPAGLDQADRIAAAHGVEVH 125

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCK-------DKIESEIKNVNGLMFHNNCENKS 171
            L        +           S+ G                    V G   +      S
Sbjct: 126 CLLRVNDRVPNPGQGLTMTGVASQFGADVDWIEQEPQRFRSRPSAPVRGFHLYTGSNVDS 185

Query: 172 FLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSE 223
                A      +            +  + LGGG             +     R+    +
Sbjct: 186 VDALVAQFTAAARTARRLRDLLGIDLTLLDLGGGFGAPFARPGQNADLTGLADRVATALD 245

Query: 224 KYSVQI-------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV------- 269
                          E G  +     TL T VLD   +    V+V  S   H+       
Sbjct: 246 DLFPAWRDGTPEVAFESGRFLTATAGTLLTRVLDFKRSQGTPVVVLESGINHLGGMSGLR 305

Query: 270 --PDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
             P  +    +A          A+V G  C   D +        V+ GD ++  +V  Y 
Sbjct: 306 RLPPLVPALHAADGRDGAPLEAAIVAGPLCTPLDTWARAANLPDVRPGDVLAVPNVGAYG 365

Query: 328 INRKNW-FNGINMPTIAVKNVDGTIKAIR 355
           ++     F G   P   V + D  ++  R
Sbjct: 366 LSASLLAFLGHPAPVEVVCDGDRVVETSR 394


>gi|148554414|ref|YP_001261996.1| Orn/DAP/Arg decarboxylase 2 [Sphingomonas wittichii RW1]
 gi|148499604|gb|ABQ67858.1| Orn/DAP/Arg decarboxylase 2 [Sphingomonas wittichii RW1]
          Length = 401

 Score =  139 bits (349), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 50/367 (13%), Positives = 109/367 (29%), Gaps = 27/367 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMD-GTTSSSLY 61
           P ++    ++  NL+        +G   ++  A+KC     + + L      G    S  
Sbjct: 36  PLFVYGAGRVRANLNRLRGALGASGCAHRIYYAMKCNRFAPLLEMLAADGAVGVDICSPD 95

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKF----KDKAQKL 114
           E+ L     F     ++            L   D   I  +++ Q+ +       +A  +
Sbjct: 96  ELDLALACGFRAGDISFTGTSVADRDLDRLLVHDDLHINCDSLGQIRRIGERRPGRAIGI 155

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN---VNGLMFHNNCE--N 169
               G       S            F    E+  + +    ++   +  + FH  C   +
Sbjct: 156 RINPGFGTGYGDSARLTYAGARTTKFGIYREQWAEALGLAARHDLRITAIHFHVGCGYLS 215

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKY 225
                +   +          + +   +++GGG+            +  +   +       
Sbjct: 216 GQLDAWDRAVGAAADFLAD-LPEATTVNIGGGLGLPHRAGDAPLDLARWSSIVARHFGGR 274

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQESATIYP- 283
            + + +EPG+ +V +   L  +V+ +        V VD     H            +   
Sbjct: 275 GLTVAIEPGDYLVKDAGLLLLSVVGVERKRDTLFVAVDGGFNLHPEPAHYDLPCEPVACV 334

Query: 284 -----NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
                        V G    A D++ E H   P++ GD ++  +  GY     +      
Sbjct: 335 LREPDPARWQPVSVAGNINEALDLWAEDHPMPPLEEGDHVALINAGGYGSAMSSNHCMRG 394

Query: 339 MPTIAVK 345
             T  + 
Sbjct: 395 AFTELLV 401


>gi|78048867|ref|YP_365042.1| putative diaminopimelate decarboxylase [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78037297|emb|CAJ25042.1| putative diaminopimelate decarboxylase [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 429

 Score =  139 bits (349), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 55/370 (14%), Positives = 107/370 (28%), Gaps = 32/370 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            Y+ D   L  +    +  +  A  +L  A K  A   +  TL  ++DG  ++S  E+  
Sbjct: 27  AYVYDLAALDTH-AAWMRAQLPAQCELFYAAKANAEPPILQTLAAHVDGFEAASGGELAW 85

Query: 66  GHEKFGGETHAY-NVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
            H +       +      D E+    +  D  +   ++S+L +    A    + + + + 
Sbjct: 86  LHAQQPQAPLLFGGPGKLDTELAQAAALPDCTVHVESLSELERLAAIAAHAGRCVPVFLR 145

Query: 124 PS---VSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKSFL 173
            +          L    +P    G    D   +  +        + G  FH     +S  
Sbjct: 146 MNIAVPGAQSTRLMMGGQPSP-FGLDPSDLDAAVRRVQANPSLRLEGFHFHLMSHQRSAA 204

Query: 174 CFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKY 225
               ++         +          ++ GGG           +    FC  L     ++
Sbjct: 205 AQLHLVAAYLHTVQQWRQTYALGPLRVNAGGGFGVDYLAPDASFDWARFCAGLPAVLREH 264

Query: 226 SV--QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
               ++ LEPG  +  +       VLD+  +      V      H               
Sbjct: 265 GTDLRLRLEPGRYLSASCGWYLMEVLDLKRSHGAWFAVARGGTHHFRTPAAQAHDHPFRV 324

Query: 284 NTGPY-------TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFN 335
             G            + G+ C   D+         +  GD ++F     Y  N  +  F 
Sbjct: 325 LRGERAPVLRDTPVTLVGQLCTPKDVLARQQPVAALAPGDCLAFPLAGAYAWNISHQHFL 384

Query: 336 GINMPTIAVK 345
               P +   
Sbjct: 385 MHPAPQMVFL 394


>gi|198434976|ref|XP_002131383.1| PREDICTED: similar to Ornithine decarboxylase (ODC) [Ciona
           intestinalis]
          Length = 551

 Score =  139 bits (349), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 57/393 (14%), Positives = 107/393 (27%), Gaps = 54/393 (13%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM- 64
           +++ D   ++              V    A+KC     +   L     G   +S  E+  
Sbjct: 40  FFICDLGDVMKKYIRWQKNFPR--VIPHYAIKCNPDEILLKMLIGLGTGFDCASKSEIRQ 97

Query: 65  -LGHEKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRI 122
            L       +    N   +   +     N    I+F+        K K       + LRI
Sbjct: 98  MLALGARPEQIIFANPCKQASHVRYARDNNVKRIVFDN--VEELIKMKKNFPTADLVLRI 155

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
               S S    +        + ++  D       NV G+ FH     +    F   L+N 
Sbjct: 156 QTDDSQSICRFSMKYGAHPDVCKQLLDTAHKMNLNVVGISFHVGSGCQDVQAFVKALQNA 215

Query: 183 EKEF---GHFITQIEWISLGGGIHFTDK-DYPVKDFCQRLKEFSEKYSVQ-------IYL 231
              F        ++  + +GGG   T+  +   ++    +    ++           +  
Sbjct: 216 RVLFDYAECIGYKLNLLDIGGGFPGTEDVNLKFEEIASVVNMTLKELFPMEEFPHVDVIA 275

Query: 232 EPGEAIVTNTTTLNTTVLDIS----------------------------------ENIKN 257
           EPG     +  TL + ++                                          
Sbjct: 276 EPGRYFAASAYTLASNIIAKREVMRDVTEETVCEQTGHTDTIENRSSPTRCDEPAYMYYI 335

Query: 258 LVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA--MVCGRSCLAGDIFGEFHFEKPVKIG 315
              +  S      D+          P+         V G +C   D   E      + +G
Sbjct: 336 NDGLYGSFNCLFYDHAHVTPKLLKEPSEIDMLYSSSVWGPTCDGLDRICELVQLPQLDVG 395

Query: 316 DRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348
           + I +ED+  Y +   + FNG     +     D
Sbjct: 396 NWILWEDMGAYTMAAGSSFNGFKTSKVYYVISD 428


>gi|113971837|ref|YP_735630.1| ornithine decarboxylase [Shewanella sp. MR-4]
 gi|113886521|gb|ABI40573.1| ornithine decarboxylase [Shewanella sp. MR-4]
          Length = 391

 Score =  139 bits (349), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 54/358 (15%), Positives = 116/358 (32%), Gaps = 26/358 (7%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+ +ID   +    D  +     A   +  A+K   A  +   L         +S+YE+
Sbjct: 30  TPFVVIDTSIIAKQYDDMVNSFPYAD--VYYAVKANPAAEILTLLKNKGSNFDIASIYEL 87

Query: 64  MLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
            +  +     +  +Y    K  +           ++ + S+ +  +  A++         
Sbjct: 88  DMVTNVGVTPDRVSYGNTIKKRQDVRAFYERGVRMYASDSEAD-LRMIAEEAPGSRIYVR 146

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLK 180
             +            +   +     +  + ++   +   G+ FH   + +    + + + 
Sbjct: 147 ILTEGTDTADWPLSRKFGCQNEMAYELLVLAKELGLEPFGISFHVGSQQRDIGAWDSAIG 206

Query: 181 NIEKEF----GHFITQIEWISLGGGIHFTDKDYPVK------DFCQRLKEFSEKYSVQIY 230
            ++  F          ++ I++GGG      D   +           LKE       QI 
Sbjct: 207 KVKSIFDRLRDEHNIVLKMINMGGGFPANYIDKTNQLGVYAEQITHFLKEDFGDDLPQII 266

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATIYPNT 285
           LEPG ++++N   L + V+ IS+         +          +       +        
Sbjct: 267 LEPGRSLISNAGVLVSEVVLISKKSYTALERWVFTDVGKFSGLIETMDEAIKFPIFTHKQ 326

Query: 286 GP-YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338
           G     ++ G +C + DI  E   +     + IGDR+ +     Y        FNG  
Sbjct: 327 GELDKCVIAGPTCDSADIMYEHYSYGLPNDLAIGDRMYWLTAGAYTTTYSAVCFNGFP 384


>gi|120586900|ref|YP_961245.1| Orn/DAP/Arg decarboxylase 2 [Desulfovibrio vulgaris subsp. vulgaris
           DP4]
 gi|120564314|gb|ABM30057.1| Orn/DAP/Arg decarboxylase 2 [Desulfovibrio vulgaris DP4]
          Length = 547

 Score =  139 bits (349), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 59/405 (14%), Positives = 109/405 (26%), Gaps = 49/405 (12%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  ++D++ L   +     +  +   G +L  + K     G+   L+    G  + S 
Sbjct: 58  GTPLLVVDEKALRAKVAEVRAVLDDELPGARLTYSYKTNCIPGILRVLHDAGVGAEAISA 117

Query: 61  YEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHK 116
           YE  L       GE   YN        +   +++   I  +   +++      +AQ    
Sbjct: 118 YEYWLAQSLGVPGEQLIYNGVDKSPESLAMAVAHGALINIDNRDEVDAVLATARAQGRVA 177

Query: 117 KIGLRINPSVSY-SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175
           +IGLR+  + S                     + K   E  ++  L F+     +     
Sbjct: 178 RIGLRLGLNRSAQFGLDPDSAEGDGDIAHVVARCKAHPEHASLEALHFNVTSNARHSGYH 237

Query: 176 SAMLKN----IEKEFGHFITQIEWISLGGGIH-------------------------FTD 206
              L      +          I  + +GGG                           + D
Sbjct: 238 VRCLALALDVMRTLARVHGVHIRLLDVGGGFGVQTSKNMSGVEYGLYRLFGVAPGGAWLD 297

Query: 207 KDYPV----KDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV 259
                    +D    L  +          + LEPG  + +    L T V  + E      
Sbjct: 298 PFQDFRLYIRDMAALLTSYCRDNGLPQPVVCLEPGRLLTSGAELLLTRVKAVKERPGAEP 357

Query: 260 IVDSSVEAH---VPDYLLYQESATIYPNTGP--YTAMVCGRSCLAGDIFGEFHFEKPVKI 314
              +         P    + E+  +     P      V GR C   D          +  
Sbjct: 358 FAITDGGRLSQAYPCDFEWHEAFLVNDLRRPLARAYTVTGRVCTRSDWLYRGKVMPELAP 417

Query: 315 GDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD ++  D   Y  +    F       +               ++
Sbjct: 418 GDILAVLDAGAYFSSYAMNF-AFPRAAVVGVEDGRARVMRHRETF 461


>gi|126176045|ref|YP_001052194.1| diaminopimelate decarboxylase [Shewanella baltica OS155]
 gi|152999015|ref|YP_001364696.1| diaminopimelate decarboxylase [Shewanella baltica OS185]
 gi|304411520|ref|ZP_07393133.1| Orn/DAP/Arg decarboxylase 2 [Shewanella baltica OS183]
 gi|307306704|ref|ZP_07586446.1| Orn/DAP/Arg decarboxylase 2 [Shewanella baltica BA175]
 gi|125999250|gb|ABN63325.1| ornithine decarboxylase [Shewanella baltica OS155]
 gi|151363633|gb|ABS06633.1| Diaminopimelate decarboxylase [Shewanella baltica OS185]
 gi|304350047|gb|EFM14452.1| Orn/DAP/Arg decarboxylase 2 [Shewanella baltica OS183]
 gi|306910672|gb|EFN41101.1| Orn/DAP/Arg decarboxylase 2 [Shewanella baltica BA175]
          Length = 391

 Score =  139 bits (349), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 54/358 (15%), Positives = 115/358 (32%), Gaps = 26/358 (7%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+ +ID   +    D  +     A   +  A+K   A  +   L         +S+YE+
Sbjct: 30  TPFVVIDTSIIAKQYDDMVNSFPYAN--VYYAVKANPAAEILSLLKDKGSNFDIASIYEL 87

Query: 64  MLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
            +        +  +Y    K  +           ++ + S+ +  +  A++         
Sbjct: 88  DMVMNVGVTTDRVSYGNTIKKRQDVRAFYERGVRMYASDSEAD-LRMIAEEAPGSRIYVR 146

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLK 180
             +            +   +     +  + ++   +   G+ FH   + +    + + + 
Sbjct: 147 ILTEGTDTADWPLSRKFGCQNEMAYELLVLAQELGLEPFGISFHVGSQQRDIGAWDSAIG 206

Query: 181 NIEKEF----GHFITQIEWISLGGGIHFTDKDYPVK------DFCQRLKEFSEKYSVQIY 230
            ++  F          ++ I++GGG      D   +           LKE       QI 
Sbjct: 207 KVKSIFDRLRDEHNITLKMINMGGGFPANYIDKTNQLGVYAEQITHFLKEDFGDDLPQII 266

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATIYPNT 285
           LEPG ++++N   L + V+ IS+         +          +       +        
Sbjct: 267 LEPGRSLISNAGILVSEVVLISKKSYTALERWVFTDVGKFSGLIETMDEAIKFPIYTDRQ 326

Query: 286 GP-YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338
           G     ++ G +C + DI  E   +     + IGDR+ +     Y        FNG  
Sbjct: 327 GELDKCVIAGPTCDSADIMYEHYSYGLPNDLAIGDRMYWLTAGAYTTTYSAVCFNGFP 384


>gi|170046134|ref|XP_001850633.1| ornithine decarboxylase 1 [Culex quinquefasciatus]
 gi|167869006|gb|EDS32389.1| ornithine decarboxylase 1 [Culex quinquefasciatus]
          Length = 438

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 55/369 (14%), Positives = 100/369 (27%), Gaps = 28/369 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +LI+   L+       ++R    V+   A+K      + +T      G   +S  EV 
Sbjct: 36  PLHLIELDTLMK--RHYQWLRHLPRVRPFYAIKSNDDAALVETAILLGCGFDCASKAEVH 93

Query: 65  LGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                    E   +   A     +          +F++  +L K  +   +    I  R 
Sbjct: 94  RVLGFGVDRERIIFAQPAKTIESLRYAREKNIRTVFDSEFELRKLHEHYPEAEVLIRYRF 153

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN---KSFLCFSAML 179
           +   +           P            +     V G  F+        + F       
Sbjct: 154 DSRNARVNLGNKFGCDPGQEARVLL-QLAKDLGIKVVGWCFNVGSACSDAEIFYDAIRKG 212

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
           + I            +I LGGG         + Y V       + + +   + I  EPG 
Sbjct: 213 REISDYAATLGFHFNYIDLGGGFSGDKDVSIEKYSVHINKALDEFYPDDKGLTIIAEPGR 272

Query: 236 AIVTNTTT-----LNTTVLDISENIKNLVIVDSSVEAHVPDYLL---YQESATIYPNTGP 287
                  T         V   + +   +  V       +    +   Y+           
Sbjct: 273 YYSAAAVTSVIPVHGKRVFRDATDQNKIDKVFYYFNDGIYGTFISAKYRNQPVNPIIWKK 332

Query: 288 -------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                  Y++ + G +C   D F        + I D + FE+   Y       FNG  +P
Sbjct: 333 RGDCGPAYSSTLFGPTCDGSDFFASDIQLPELDISDFVVFENQGAYARVHSCRFNGFCLP 392

Query: 341 T-IAVKNVD 348
             +      
Sbjct: 393 KGVIFIRRS 401


>gi|117922115|ref|YP_871307.1| ornithine decarboxylase [Shewanella sp. ANA-3]
 gi|117614447|gb|ABK49901.1| ornithine decarboxylase [Shewanella sp. ANA-3]
          Length = 391

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 54/358 (15%), Positives = 115/358 (32%), Gaps = 26/358 (7%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+ +ID   +    D  +     A   +  A+K   A  +   L         +S+YE+
Sbjct: 30  TPFVVIDTSIIAKQYDDMVNSFPYAD--VYYAVKANPAAEILTLLKNKGSNFDIASIYEL 87

Query: 64  MLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
            +  +     +  +Y    K  +           ++ + S+ +  +  A++         
Sbjct: 88  DMVTNVGVTPDRVSYGNTIKKRQDVRAFYERGVRMYASDSEAD-LRMIAEEAPGSRIYVR 146

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLK 180
             +            +   +     +  + +    +   G+ FH   + +    + + + 
Sbjct: 147 ILTEGTDTADWPLSRKFGCQNEMAYELLVLANELGLEPFGISFHVGSQQRDIGAWDSAIG 206

Query: 181 NIEKEF----GHFITQIEWISLGGGIHFTDKDYPVK------DFCQRLKEFSEKYSVQIY 230
            ++  F          ++ I++GGG      D   +           LKE       QI 
Sbjct: 207 KVKSIFDRLRDEHNIVLKMINMGGGFPANYIDKTNQLGVYAEQITHFLKEDFGDDLPQII 266

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATIYPNT 285
           LEPG ++++N   L + V+ IS+         +          +       +        
Sbjct: 267 LEPGRSLISNAGVLVSEVVLISKKSYTALERWVFTDVGKFSGLIETMDEAIKFPIFTHKQ 326

Query: 286 GP-YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338
           G     ++ G +C + DI  E   +     + IGDR+ +     Y        FNG  
Sbjct: 327 GELDKCVIAGPTCDSADIMYEHYSYGLPNDLAIGDRMYWLTAGAYTTTYSAVCFNGFP 384


>gi|255714170|ref|XP_002553367.1| KLTH0D15114p [Lachancea thermotolerans]
 gi|238934747|emb|CAR22929.1| KLTH0D15114p [Lachancea thermotolerans]
          Length = 446

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 53/370 (14%), Positives = 106/370 (28%), Gaps = 32/370 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++    +    +     V    A+K      + +TL +       +S  E+ +
Sbjct: 73  FFVCDLGEVKRLYEHWHAMLPR--VHPFYAVKSNPDRQVLETLVKLGANFDCASKSEIEM 130

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       Y    K         N D       +     K K      ++ LRI  
Sbjct: 131 VLNLGVEPSRIIYANPCKASSFIRYAKNSDVRKSTFDNVEELAKIKKYHPESELLLRIAT 190

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S ++  L+               K++    N+ G+ FH       F  F   +++  +
Sbjct: 191 DDSTAQCRLSTKYGCEMEGVGSLLAKVKELGLNLVGVSFHIGSGASDFGSFYKAVRDARQ 250

Query: 185 EF-----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-KYSVQIYLEPGEAIV 238
            F      + +  +  + +GGG                L+EF        I  EPG    
Sbjct: 251 VFDLARERYGLQNVHILDIGGGFQLDSFAESSAVLNAALEEFFPLGSGTDIIAEPGRFFA 310

Query: 239 TNTTTLNTTVLD----------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT--- 285
            +  TL   V+           +  N      ++  +  H             +      
Sbjct: 311 ASPFTLACHVIAKRAHDEKESMLYINDGVYGNMNCILFDHQKPTPRVLYHNQQFQYWDFE 370

Query: 286 ---------GPYTAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                      +   + G +C   D    E++ +  + +GD + F  +  Y  +    FN
Sbjct: 371 SSSSTANAQCQHKVSIWGPTCDGLDCITSEYYLKHDLVVGDWLYFPVLGAYTSSAATQFN 430

Query: 336 GINMPTIAVK 345
           G       + 
Sbjct: 431 GFEQVADVIY 440


>gi|209544203|ref|YP_002276432.1| Orn/DAP/Arg decarboxylase 2 [Gluconacetobacter diazotrophicus PAl
           5]
 gi|209531880|gb|ACI51817.1| Orn/DAP/Arg decarboxylase 2 [Gluconacetobacter diazotrophicus PAl
           5]
          Length = 376

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 52/357 (14%), Positives = 105/357 (29%), Gaps = 27/357 (7%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP  ++D  ++     +   +      ++  A+K   A  +   L        ++S  E+
Sbjct: 16  TPCLVVDVDRVEARYQSLRAVLPL--ARIYYAVKANPAPAILRRLVSLGSAFDAASWEEI 73

Query: 64  MLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            L       G   ++            A  +      F+++ +L K    A        L
Sbjct: 74  RLCLAAGAAGADISFGNTVKKASAIAQAHQAGVTMFAFDSIEELEKLARHAPGSRVYCRL 133

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
            +    +             S      + +         GL FH   +  S   + A + 
Sbjct: 134 IVENEGAEWPLSRKFGTTLDSARDLMLRARDMGLDP--YGLSFHVGSQQTSTDAYEAAIA 191

Query: 181 NIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDF------CQRLKEFSEKYSVQIYL 231
            +   F         +  ++LGGG     ++   +           + E       ++ +
Sbjct: 192 RVGMLFTDLAAAGLNLRMVNLGGGFPIRYREDVPEIDRFAVAISHAMTEHFGNDLPEMIV 251

Query: 232 EPGEAIVTNTTTLNTTVLDI----SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287
           EPG  IV +   +++ V+ +     ++    V +D      + +         I      
Sbjct: 252 EPGRFIVGDAGVVSSEVVLVTRRGQQDGPRWVYLDIGRFGGLAETEGESIRYGIRTPHDG 311

Query: 288 YT---AMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINR-KNWFNGI 337
                  + G +C   DI  E   +     +  GDRI       Y        FNG 
Sbjct: 312 SPAGRVAIAGPTCDGADIMYEKAPYALPLDLACGDRIELLSTGAYVSTYCSTSFNGF 368


>gi|329888519|ref|ZP_08267117.1| lysine/ornithine decarboxylase [Brevundimonas diminuta ATCC 11568]
 gi|328847075|gb|EGF96637.1| lysine/ornithine decarboxylase [Brevundimonas diminuta ATCC 11568]
          Length = 398

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 47/347 (13%), Positives = 95/347 (27%), Gaps = 21/347 (6%)

Query: 20  TALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSLYEVMLGHEKFGGETHAYN 78
            A + + N    +  A+K   +  + + L +        +SL E+ L          A+ 
Sbjct: 9   AAQWFQDNLKADVFYAVKANPSRWIIEVLVENGVNAFDVASLAEIELVRSVSPNARLAFM 68

Query: 79  VAYKDCEID---AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILAD 135
              K               T + ++  +L+K  + +      + L +   VS      + 
Sbjct: 69  HPVKSRGAIKAAYADHGVRTFVLDSHDELDKILE-STGHADDLNLIVRMGVSADGAAYS- 126

Query: 136 PNRPFSRLGEKCKDKIESEIKNVN----GLMFHNNCENKSFLCFSAMLKNIEKEFGHFIT 191
            +  F    ++    +++    V     G+ FH   +      + A +  + +       
Sbjct: 127 LSGKFGVSPDQAPALLQATRHAVKDGQMGVSFHVGSQCMRPSAYEAAMTQVGRAIKKAGV 186

Query: 192 QIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251
            ++ + +GGG           D  +        ++     E  E        L      +
Sbjct: 187 FVDIVDVGGGFPSVYPGMVPPDLSEYADAIHRGFNEMPVSETTELWCEPGRALVAEASSV 246

Query: 252 SENIKNLVIVDSSVEA-----HVPDYLLYQESATIYPNTGP-----YTAMVCGRSCLAGD 301
              +         +                   T     G            G +C + D
Sbjct: 247 LCRVDLRKGDALYLNDGSYGSLFDATHSRWPFPTKLVRDGESSSELKPYRFYGPTCDSID 306

Query: 302 IF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
              G F     V+ GD I    +  Y +     FNG     IA    
Sbjct: 307 HMPGPFWLPADVQEGDFIEIGMMGAYGVAMSTGFNGYGEHEIAAVED 353


>gi|55978175|gb|AAV68696.1| LolD-2 [Neotyphodium uncinatum]
          Length = 415

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 50/364 (13%), Positives = 97/364 (26%), Gaps = 36/364 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++              V    A+K      +  TL     G   +S  E+ L
Sbjct: 33  FFVADLNDVVRKWAAWKEAL--PDVTPFFAVKSSYDRRLIQTLATCGAGFDCASTEEIEL 90

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                 G E   +    K      +        I F+   +L K      +    + +  
Sbjct: 91  ILSLGIGAERIIFTHPCKPVSSLGLCRKLGITLITFDNECELRKLHHHYPEAQTVLRVFA 150

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFH----NNCENKSFLCFSAM 178
           +   +                G      ++     + G  FH       +  +++     
Sbjct: 151 DDPTNADPLGTKFGAARDDFDG--LVRLVKELNMQLAGASFHAAPSVAVDAAAYVRGIRD 208

Query: 179 LKNIEKEFGHFITQIEWISLGGGI----HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
              +             + +GGG                  +  K    +  ++I  EPG
Sbjct: 209 TAEVFARARQVGLNPTVLDIGGGYTDSTFQQIAGAVRPAIAECFKSEVGEGRLRILAEPG 268

Query: 235 EAIVTNTTTLNTTV-----------------LDISENIKNLVIVDSSVEAHVPDYLLYQE 277
                +   L   V                 L I++ I +  ++   V        + +E
Sbjct: 269 TLFSCSPFYLAVKVVARRVNATAFGHEPATRLYINDGIYSNFMMRFIVNMTFSPAAVIRE 328

Query: 278 SATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFE-KPVKIGDRISFEDVAGYNINRKNW 333
                            + GRSC + D           V++GD + F+D+  Y       
Sbjct: 329 GVWHDQADHTMRGEACSLWGRSCDSNDCINRDCRLGPEVRVGDWLVFKDMGAYTTVCNTT 388

Query: 334 FNGI 337
           FNG 
Sbjct: 389 FNGF 392


>gi|239943147|ref|ZP_04695084.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces roseosporus NRRL 15998]
 gi|239989605|ref|ZP_04710269.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces roseosporus NRRL 11379]
 gi|291446623|ref|ZP_06586013.1| decarboxylase [Streptomyces roseosporus NRRL 15998]
 gi|291349570|gb|EFE76474.1| decarboxylase [Streptomyces roseosporus NRRL 15998]
          Length = 442

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 49/403 (12%), Positives = 98/403 (24%), Gaps = 51/403 (12%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+ D  +      +           L  +LK      +   L +       SS  E
Sbjct: 18  GSPLYVYDLDETEAAARSLRGALPQP-STLYYSLKANPHPLLARALRRAGCHAEVSSQGE 76

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +    E  F G+   Y    K     A    +        +     +    A +      
Sbjct: 77  LAAALEAGFAGDEILYTGPGKTRLEIADAVCAGVLRFSVESAGDYRRVAAVAAERGVTAQ 136

Query: 120 LRINPSVSY-SKFILADPNRPFSRLGE-------KCKDKIESEIKNVNGLMFHNNCENKS 171
             +  + S              S+ G          +         V G+ F      + 
Sbjct: 137 CLLRLNASESHGSSGLRMTGTSSQFGTDSAAVIADPEQFAPRPGARVIGMHFFALSNARD 196

Query: 172 FL----CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSE 223
                    + +    +        + ++ LGGG                  + L+   +
Sbjct: 197 PESLLASLVSSIAEAARVHQACGVPLAYVDLGGGFAAPYAAEGARPDYGALREPLEAALD 256

Query: 224 KYSVQI-------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-------- 268
           ++             E G  +V     L  TV DI ++ +   +V  +   H        
Sbjct: 257 EHLPDWRNGTTTIAFESGRHLVGGCGQLVCTVSDIKQSRERTYVVLDTGIHHLGGLAGLG 316

Query: 269 ----VPDYLLYQES------ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRI 318
               +    +   +        +        A++ G  C   D+         V     +
Sbjct: 317 RLLPMRASTVPARTGGVPGEPDVPYGAADDRAVLVGPLCTPADVLARDASLPRVGRDGLL 376

Query: 319 SFEDVAGYNINRK-NWFNGINMPTIAVKNVD-----GTIKAIR 355
           +  +V  Y +      F    +    V           I+  R
Sbjct: 377 TVPNVGAYGLTASLIGFLSRPVAAEIVLAAGATLDASRIELRR 419


>gi|144897787|emb|CAM74651.1| Ornithine decarboxylase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 376

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 48/332 (14%), Positives = 106/332 (31%), Gaps = 27/332 (8%)

Query: 30  VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDA 88
            ++  A+K   A  +   L         +S  EV L  E     +  ++    K     A
Sbjct: 40  AQVYYAVKANPAPEIIRMLVGLGSSFDVASRGEVDLCLENGARADNISFGNTIKKQSDIA 99

Query: 89  VLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEK 146
                      F++ ++L K  + A        + +    +     L+        + + 
Sbjct: 100 YAYSKGVRLYAFDSEAELEKLAESAPGSRVFCRILMTCDGAEW--PLSRKFGCEIEMAKD 157

Query: 147 CKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIH 203
              K      +  G+ FH   +      +   +      F         ++ ++LGGG  
Sbjct: 158 LLVKARELGMDPYGVSFHVGSQQTDLNQWDIAVGKAAMLFTALNEAGIDLKMMNLGGGFP 217

Query: 204 FTDKDY--PVKDFCQRLKEFSEKYS----VQIYLEPGEAIVTNTTTLNTTVLDISENIKN 257
              +     V+ +   +      +       + +EPG ++V +   L   V+ IS+   +
Sbjct: 218 AKYRTDIPAVERYADAVMHAMTNHFGNALPAMIIEPGRSLVGDAGVLEAEVVLISKKSYD 277

Query: 258 LVIVDSSVE--------AHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGE---F 306
             +    ++          + + + Y+   T          ++ G +C + DI  E   +
Sbjct: 278 EDVRWVYLDIGKFGGLAETMDEAIKYR-IQTPRDGEETAPVVLAGPTCDSADILYEKAGY 336

Query: 307 HFEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337
                +K+GD++       Y  +     FNG 
Sbjct: 337 EMPVTLKVGDKVRILSTGAYTTSYSAVNFNGF 368


>gi|189426082|ref|YP_001953259.1| diaminopimelate decarboxylase [Geobacter lovleyi SZ]
 gi|189422341|gb|ACD96739.1| Diaminopimelate decarboxylase [Geobacter lovleyi SZ]
          Length = 439

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 60/400 (15%), Positives = 125/400 (31%), Gaps = 46/400 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP YL D++ + N+ +  L +    G+ +  A+K  +   +   +         SSL E
Sbjct: 24  GTPIYLHDQEYIENSCEQLLNMPNAFGLHVRYAMKANSDRTVLRVVTGKGLDLDCSSLDE 83

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEI-----DAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
               H                         +A++         ++ Q N   D A+    
Sbjct: 84  AARAHAAGIPFSRMMLTTQEVPGGDERAELEAMIKAGLKYNVCSMLQFNLIADFAKANRI 143

Query: 117 KIGLRINP-----SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN-K 170
            + +R++P       S ++   ++ +     L +  K K  ++ K +     H +  +  
Sbjct: 144 DLSMRVHPGAAGGGESATRDTGSEYSCFGVHLNDVPKVKAMADEKGLRFTQVHVHIGSGG 203

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV--- 227
               +   +         +      +S GGG+         +     L  ++++      
Sbjct: 204 DPEKWRQNIDRELGFVKTYFPDATTVSFGGGLKVARMPGEKQADIASLGAYAKQRIEEFK 263

Query: 228 -------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-PDYLLYQESA 279
                  Q+ +EPG  +V N+  + T ++D     +   ++       +    L   E  
Sbjct: 264 AETGRELQMEIEPGTFVVANSGHIITRIIDKKLTNELNFLIVDGGMELLTRPLLYGSEHP 323

Query: 280 ---------------TIYPNTGPYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDR 317
                             P  G  +  + GR C +GD                  +IGD 
Sbjct: 324 VSIVRQDGTLLSSEYDQAPAQGLKSFGIVGRCCESGDSVRLDNDGNIVPVLIAEPEIGDY 383

Query: 318 ISFEDVAGYNINRKN-WFNGINMPTIAVKNVDGTIKAIRE 356
           +       Y+ +     +N    P   +K   G +  IR+
Sbjct: 384 VVIGGTGAYSESMSPENYNSHRKPGAVMKTKSGELVQIRK 423


>gi|71280920|ref|YP_269410.1| Orn/DAP/Arg decarboxylase family protein [Colwellia psychrerythraea
           34H]
 gi|71146660|gb|AAZ27133.1| Orn/DAP/Arg decarboxylase, family 2 [Colwellia psychrerythraea 34H]
          Length = 425

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 64/401 (15%), Positives = 119/401 (29%), Gaps = 43/401 (10%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67
           ++D   L   ++ A             A+K  A   + + L +Y  G   +S  E+++  
Sbjct: 26  VMDLDGLKKTVNDAYAAFPANFFHT-FAVKANALVKVLEPLREYGMGAEVASPGELLIAV 84

Query: 68  -EKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKA---QKLHKKIGLRI 122
              F  E   ++   K  +           +  + + +L +         +    IG R+
Sbjct: 85  TAGFTAENIIFDSPAKTLQDLRTCIKKGIALNIDNLQELERIDALMLEFPESTSIIGFRV 144

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFHNNCE----NK 170
           NP +   K          S+ G    D         I  +   +  +  H+  +    + 
Sbjct: 145 NPQIGGGKIGSTSTATATSKFGYALVDGDNRNELISIYKKRPWLKSIHTHSGSQGCELSL 204

Query: 171 SFLCFSAMLKNIEKEFGHFITQ-IEWISLGGGIHFTDKDY-------PVKDFCQRLKEFS 222
                  + +  E+       Q I  + +GGG+                 D  +      
Sbjct: 205 MAKGIKIITELAEEINSLVGLQQITRLDIGGGLPVNFSSEIIKPSFKDYADILKAEVPLL 264

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDS------SVEAHVPDYLLYQ 276
                Q+  E G AIV     + T V     +    +          +  A +P     +
Sbjct: 265 FTDKYQVKTEFGRAIVAKNGVIITRVEYTKNSGGRHIATTHAGAQIITRTAFLPKSWPIR 324

Query: 277 ESATIYPNTGP-------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
            +                 T  V G  C AGD+         ++  D +   D  GY   
Sbjct: 325 VTGYTTKGEERTAQTSEVVTTDVAGPCCFAGDLICSNQPLPKLESNDYVMVHDTGGYYFT 384

Query: 330 RKNWFNGINMPTIAVK---NVDGTIKAIRE-FSYNDYYNNL 366
               +N +    I      + D TI+ IR+  S  D  N +
Sbjct: 385 NHFDYNSLPRVAIYTVAGHDDDLTIECIRQGESLEDVLNKM 425


>gi|328717376|ref|XP_001952703.2| PREDICTED: ornithine decarboxylase-like [Acyrthosiphon pisum]
          Length = 444

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 60/363 (16%), Positives = 117/363 (32%), Gaps = 26/363 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y+ D   L+N     ++ +K   VK   A+KC  +  + + L+ +      +S  E+ 
Sbjct: 35  PFYIFDIGDLVN--KAIIWQQKLPRVKPFYAVKCNDSSLVLEILSAFGTNFDCASKVEIK 92

Query: 65  LGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
              +         +            A+    D   F+   +L K K      +  I +R
Sbjct: 93  KVLDLGVNPSRLIFANPAKMASHIKYAMSKCVDLTTFDNKLELYKIKSLHPSCNLVIRIR 152

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
            + + +     +     P +               +V G+ FH          F   +  
Sbjct: 153 CDATEAQCPLGIKYGCDPLTEAP-SLMALARDLGLSVVGVSFHVGSGCNEPAAFQRAIAA 211

Query: 182 IEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ-----IYLE 232
               F          +  +++GGG     K+  +      + +  +++        I  E
Sbjct: 212 SAGIFQLAQELGFMNMYLLNIGGGFPGN-KNTSLDKIANIVNDALDEWFPPNNGVTIIAE 270

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLL-YQESATIYPNTGPYTAM 291
           PG   V +  TL T +  I +   N   +   +   V           ++      Y   
Sbjct: 271 PGRYFVASAFTLATKIHSIKKRSNNESHIMYFINDGVYGSFNSILYDHSVIVPKSLYDYS 330

Query: 292 ---------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
                    + G +C   D   +F     +K+ D I+FE++  Y I     FNG  +P +
Sbjct: 331 RSRPICESSIWGPTCDGLDKVVDFVNMPLLKMDDWITFENMGAYTIPIACTFNGFPLPKV 390

Query: 343 AVK 345
              
Sbjct: 391 FAV 393


>gi|300175269|emb|CBK20580.2| Diaminopimelate decarboxylase [Blastocystis hominis]
          Length = 436

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 64/391 (16%), Positives = 129/391 (32%), Gaps = 43/391 (10%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE 68
           ID   LL N++           K   A+K      +   + ++  G   +S  E+ +  E
Sbjct: 33  IDSGVLLENMNEIKEAFPEPFFKHRYAIKANPIKKLIRFIGEHGFGVECASFEELSIALE 92

Query: 69  -KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNK-------FKDKAQKLHKKIG 119
                    Y+    +  ++     +   I F+ + ++          + + + L   IG
Sbjct: 93  SGIPASEIVYDFPLKRKHDLQFCFEHGIHINFDNLQEMEMGYNLYRSLESEGKVLRGSIG 152

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLMFHNNCENKSF 172
           +RIN               P S+ G   KD        + ++   VNGL  H   +    
Sbjct: 153 VRINSQYGVGAIEATSTAAPTSKFGVPIKDTDYNELLGLFAKWPEVNGLHSHVGSQGIDL 212

Query: 173 LCFSAMLKNIEKEFGH-----FITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFSE 223
                 +K I              QI  + +GGG+    K    ++    + ++L+    
Sbjct: 213 SSMVNGVKFILDLADRLNRDLHRKQITVLDIGGGLPVDYKSDCSNHMPLHYAEQLRAKVP 272

Query: 224 KYS---VQIYLEPGEAIVTNTTTLNTTVLD------ISENIKNLVIVDSSVEAHVPDYLL 274
           +       +  E G  +V  +    + V        +   I +        E ++P    
Sbjct: 273 RLFSGEFTVITENGRWVVATSGWFVSRVEYTKIAGGVLVGITHAGGNMFVREVYMPSTWS 332

Query: 275 YQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
           +  S              TA + G  C +GD+  +       + GD + +   A Y+I+ 
Sbjct: 333 HPISVYDRDGGKKRDNVRTASIAGPLCFSGDLIAKEVPLPAFEQGDFVVYHHTAAYSISM 392

Query: 331 KNWFNGINMPTIAVKN---VDGTIKA--IRE 356
            + +N I+ P   + +    +G +    I+ 
Sbjct: 393 YSIYNCISAPPAFMYSVKADNGEVDVCCIKR 423


>gi|148285652|gb|ABQ57519.1| LolD [Neotyphodium coenophialum]
          Length = 415

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 50/364 (13%), Positives = 97/364 (26%), Gaps = 36/364 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++              V    A+K      +  TL     G   +S  E+ L
Sbjct: 33  FFVADLNDVVRKWAAWKEAL--PDVTPFFAVKSSYDRRLIQTLATCGAGFDCASTEEIEL 90

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                 G E   +    K      +        I F+   +L K      +    + +  
Sbjct: 91  ILSLGIGAERIIFTHPCKPVSSLGLCRKLGITLITFDNECELRKLHHHYPEAQTVLRVFA 150

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFH----NNCENKSFLCFSAM 178
           +   +                G      ++     + G  FH       +  +++     
Sbjct: 151 DDPTNADPLGTKFGAARDDFDG--LVRLVKELNMQLAGASFHAAPSVAVDAAAYVRGIRD 208

Query: 179 LKNIEKEFGHFITQIEWISLGGGI----HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
              +             + +GGG                  +  K    +  ++I  EPG
Sbjct: 209 AAEVFARARQVGLNPTVLDIGGGYTDSTFQQIAGAVRPAIAECFKSEVGEGRLRILAEPG 268

Query: 235 EAIVTNTTTLNTTV-----------------LDISENIKNLVIVDSSVEAHVPDYLLYQE 277
                +   L   V                 L I++ I +  ++   V        + +E
Sbjct: 269 TLFSCSPFYLAVKVVARRVNATAFGHEPATRLYINDGIYSNFMMRFIVNMTFSPAAVIRE 328

Query: 278 SATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFE-KPVKIGDRISFEDVAGYNINRKNW 333
                            + GRSC + D           V++GD + F+D+  Y       
Sbjct: 329 GVWHDQADHTMRGEACSLWGRSCDSNDCINRDCRLGPEVRVGDWLVFKDMGAYTTVCNTT 388

Query: 334 FNGI 337
           FNG 
Sbjct: 389 FNGF 392


>gi|208780155|ref|ZP_03247498.1| pyridoxal-dependent decarboxylase, C- sheet domain protein
           [Francisella novicida FTG]
 gi|208744159|gb|EDZ90460.1| pyridoxal-dependent decarboxylase, C- sheet domain protein
           [Francisella novicida FTG]
          Length = 403

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 52/380 (13%), Positives = 107/380 (28%), Gaps = 33/380 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P++  D   L  +      +     VKL  ALK      +    ++       +S+ E+ 
Sbjct: 20  PFFYYDLDMLEAHAKELHRL----PVKLWYALKANPLSRIIKVFDEQKISFDVASIGELD 75

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKK--IG 119
                    +   +    K                +  +++Q     +  +K +    + 
Sbjct: 76  QVLAQGVNPKNILHTGPAKSYSQLEYFLAQGVRIFVIESINQFKDLSNLVEKKNINVKVL 135

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLMFHNNCENKS 171
           LR+    +  +  +       +  G    D  +        S   ++ G+          
Sbjct: 136 LRVQLVWNDQENNVLGGGGCVTPFGLSINDWRDFFNSAPNISNNMSIIGMHCFQWGNILC 195

Query: 172 FLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               S + +   K            ++ I LGGGI               L     K   
Sbjct: 196 LNKLSQIWEITTKALLDLSEAINVSLKVIDLGGGIGVPYNAGQKSISINDLIFCFNKLKK 255

Query: 226 ---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-PDYLLYQESATI 281
               ++ +LE G   V  +    T ++D        ++V      H+    L  +     
Sbjct: 256 EFPDIEYWLELGRYAVAESGVYVTKIVDRKSVNNIDLLVTDGGAQHLVRPALTGESFPIQ 315

Query: 282 YPNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNG 336
                         + G  C + D  G     K + + D + F+    Y        F  
Sbjct: 316 LLREEACGETNDFQIHGPLCTSLDKAGIASLPKDIGLNDYLIFKQTGAYGFTESMPLFLC 375

Query: 337 INMPTIAVKNVDGTIKAIRE 356
            N+P   +    G ++ +R+
Sbjct: 376 HNLPAEVIFYK-GQLQTVRQ 394


>gi|78221443|ref|YP_383190.1| diaminopimelate decarboxylase [Geobacter metallireducens GS-15]
 gi|78192698|gb|ABB30465.1| diaminopimelate decarboxylase [Geobacter metallireducens GS-15]
          Length = 439

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 57/401 (14%), Positives = 114/401 (28%), Gaps = 48/401 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP YL D+Q + N+ D  L +    G+ +  A+K  +   +   +         SSL E
Sbjct: 24  GTPIYLHDQQYIENSCDQLLAMPNAYGLHVRYAIKANSDRTVLRIVTGKGLDLDCSSLDE 83

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEI-----DAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
               H                         +A++         +  Q     D A +   
Sbjct: 84  AARAHAAGIPYSRMMLTTQEVPTGEERTELEAMIKVGLKYNVCSTLQYQLIADFAAQNKI 143

Query: 117 KIGLRINPSVSYSKFILADPNRPF-SRLGEKCKD------KIESEIKNVNGLMFHNNCEN 169
            + +R++P  +              S  G   +D        + +      +  H     
Sbjct: 144 DLSMRVHPGAAGGGESATRDTGSEYSCFGVHLRDVPTVKALADEKGLRFTQVHVHIGSG- 202

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227
            +   +   +         +      +S GGG+         +     L  ++++     
Sbjct: 203 GAPEKWQENIDRELGFIKTYFPDAVTVSFGGGLKVARMPGEKQADIATLGAYAKQRIEEF 262

Query: 228 --------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-PDYLLYQES 278
                    + +EPG  +V N+  + T ++D     +   ++       +    L   E 
Sbjct: 263 KAATGRELMMEIEPGTFVVANSGHIVTRIIDKKFTNEMNFLIVDGGMELLTRPLLYGSEH 322

Query: 279 A---------------TIYPNTGPYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGD 316
                              P  G     + GR C +GD                  +IGD
Sbjct: 323 PIAIVRQDGTLLSSEYDQTPTAGLKPFGIVGRCCESGDSVRLDKEGNIVPVMIVEPEIGD 382

Query: 317 RISFEDVAGYNINRKN-WFNGINMPTIAVKNVDGTIKAIRE 356
            +       Y+ +     +N    P   ++   G +  IR+
Sbjct: 383 YVVIGGTGAYSESMSPENYNSHRKPGAVMRTKTGELVLIRK 423


>gi|254375090|ref|ZP_04990570.1| hypothetical protein FTDG_01279 [Francisella novicida GA99-3548]
 gi|151572808|gb|EDN38462.1| hypothetical protein FTDG_01279 [Francisella novicida GA99-3548]
          Length = 403

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 53/380 (13%), Positives = 105/380 (27%), Gaps = 33/380 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P++  D   L  +      +     VKL  ALK      +    ++       +S+ E+ 
Sbjct: 20  PFFYYDLDMLEAHAKELHRL----PVKLWYALKANPLSRIIKVFDEQKISFDVASIGELD 75

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKK--IG 119
                    +   +    K                +  +++Q     +  +K +    + 
Sbjct: 76  QVLAQGVNPKNILHTGPAKSYSQLEYFLAQGVRIFVIESINQFKDLSNLVEKKNINVKVL 135

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLMFHNNCENKS 171
           LR+          +       +  G    D  +        S   ++ G+          
Sbjct: 136 LRVQLVWDDQGGNVLGGGGCVTPFGLSINDWRDFFNSAPNISNNMSIIGMHCFQWGNILC 195

Query: 172 FLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               S + +   K            +E I LGGGI               L     K   
Sbjct: 196 LNKLSQIWEITTKALLDLSEAINVSLEVIDLGGGIGVPYNAEQKSISINDLIFCFNKLKK 255

Query: 226 ---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-PDYLLYQESATI 281
               ++ +LE G   V  +    T ++D        ++V      H+    L  +     
Sbjct: 256 EFPDIEYWLELGRYAVAESGVYVTKIVDRKSVNNIDLLVTDGGAQHLVRPALTGESFPIQ 315

Query: 282 Y----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNG 336
                  +      + G  C + D  G     K   + D + F+    Y        F  
Sbjct: 316 LLREESCSETNDFQIHGPLCTSLDKAGIASLPKDTGLNDYLIFKQTGAYGFTESMPLFLC 375

Query: 337 INMPTIAVKNVDGTIKAIRE 356
            N+P   +    G ++ +R+
Sbjct: 376 HNLPAEVIFYK-GQLQTVRQ 394


>gi|241667667|ref|ZP_04755245.1| pyridoxal-dependent decarboxylase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876212|ref|ZP_05248922.1| pyridoxal-dependent decarboxylase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842233|gb|EET20647.1| pyridoxal-dependent decarboxylase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 403

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 57/381 (14%), Positives = 111/381 (29%), Gaps = 33/381 (8%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           +P++  D   L  +      +     VKL  ALK      +    ++       +S+ E+
Sbjct: 19  SPFFYYDLDMLEAHAKELKKL----PVKLWYALKANPLSRIIKIFDEQKISFDVASIGEL 74

Query: 64  MLGH-EKFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKK--I 118
                +    E   +    K                +  +++Q     D  ++ + K  I
Sbjct: 75  DQVLDQGVNPENILHTGPAKSYSQLEYFLAQGVRIFVIESINQFRDLSDLVERKNIKVEI 134

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLMFHNNCENK 170
            LR+    +  +  +       +  G    D  +        S   ++ G+         
Sbjct: 135 LLRVQLVWNDQESNVLGGGGCVTPFGLSMNDWKDFFNSSPSISNNMSIIGMHCFQWGNIL 194

Query: 171 SFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY- 225
                S + K I K            ++ I LGGGI               L        
Sbjct: 195 CLDKLSQIWKTITKALLDLSEAINVSLKIIDLGGGIGVPYNSSQKAVSINDLISCFNNLK 254

Query: 226 ----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-PDYLLYQESAT 280
                ++ +LE G   V  +    T V+D        ++V      H+    L  +    
Sbjct: 255 KEFPDIEYWLELGRYAVAESGVYLTKVVDRKSVNNINLLVTDGGAQHLVRPALTGESFPI 314

Query: 281 IY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FN 335
                   +      + G  C + D  G     K + + D + F+    Y        F 
Sbjct: 315 ELLREESCSETNDFQIHGPLCTSLDKAGIASLPKDIGLNDYLIFKQTGAYGFTESMPFFL 374

Query: 336 GINMPTIAVKNVDGTIKAIRE 356
             N+P   +    G ++ +R+
Sbjct: 375 CHNLPAEIIFYK-GHLQTVRQ 394


>gi|91791946|ref|YP_561597.1| Orn/DAP/Arg decarboxylase 2 [Shewanella denitrificans OS217]
 gi|91713948|gb|ABE53874.1| Orn/DAP/Arg decarboxylase 2 [Shewanella denitrificans OS217]
          Length = 405

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 54/376 (14%), Positives = 108/376 (28%), Gaps = 33/376 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            ++ D  +L  ++ T         V    A+K  +   +   L  ++ G   +S+ E+  
Sbjct: 20  AFIYDLDQLSAHIRTMTSRLPK-QVDCYYAIKANSDSAILRALLPHVYGFEVASMGEIEK 78

Query: 66  GHEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                     A+    K       A+  N       +  QL +    A++ ++ +   + 
Sbjct: 79  VRAISQNVPIAFGGPGKTITELTRALTLNVQLYHLESELQLARLNQLAKEQNQLVRCLLR 138

Query: 124 PSVSYS-KFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCEN----KS 171
            +  +             ++ G   ++ +    +        V GL FH    N    K 
Sbjct: 139 VNPYFDLPSATLQMAGQATQFGIDERELLALLPRLGDYPNIQVEGLHFHCLSNNLDAVKH 198

Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKYSV- 227
                  L+        F      +++GGGI  T +   ++    + ++L      Y   
Sbjct: 199 VTLVRHYLQTASTWAAQFGLTWTTVNIGGGIGVTYQGETEFDFPLYAEQLTLLCRDYPQL 258

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPNTG 286
            +  E G  I  +     T V DI  +      V      H                   
Sbjct: 259 HLATECGRYISADCGVYLTEVTDIKLSHNEYFAVLRGGTHHFRLPSSWQHSHPFKIYPRE 318

Query: 287 PYTAM------------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW- 333
            +               +CG  C   D+  +      +K+ D I F+    Y  +  +  
Sbjct: 319 TWHYPFTRPSVTDTAITLCGELCTPKDVLAKNVHVAQLKVADVIVFQKAGAYGWHISHHD 378

Query: 334 FNGINMPTIAVKNVDG 349
           F     P       + 
Sbjct: 379 FLSHPHPQRLYIKENQ 394


>gi|255306837|ref|ZP_05351008.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile
           ATCC 43255]
          Length = 403

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 63/394 (15%), Positives = 130/394 (32%), Gaps = 51/394 (12%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y+ D+  ++             G   L ++K      +  ++ +   G  +SS  EVM
Sbjct: 15  PCYIYDETNIIEKCKELKN--NILGFDFLYSIKTNPYNKIVKSIAEQGFGADASSTNEVM 72

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +  E     +   Y+   K       + +   II ++++++      ++K ++K+ + I 
Sbjct: 73  ISSECGVSKDDIYYSSPGKTEIDIETVLDKCIIIADSITEVELINKISKKYNQKVKIGIR 132

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENKSFLCFS 176
            +     F + D +   S+ G   +D           +  +V G+  H   +   F    
Sbjct: 133 INPD---FTMDDDSAKSSKFGIDIEDMSSVFKMLSMCDYVSVVGIHIHIKSQVLDFEKLG 189

Query: 177 AMLKNIEKEF----GHFITQIEWISLGGGIHFTDKD--YPVKDFCQRLKEFSE------- 223
              +                IE+I+ G G+     +      +  +  K   +       
Sbjct: 190 HYYEKCFFIALNLNKSKYINIEFINFGSGLGVAYDNLRENPLNLKELSKLTQKIAFTNSN 249

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPD----------- 271
               ++ +E G  IV  +      ++DI  +  K  +IV + +   +             
Sbjct: 250 TLKSRLLIESGRFIVCKSGNYYVKIVDIKVSRGKKYLIVKNGLNGFMRPIISNLIENITC 309

Query: 272 -----------YLLYQESATIYPNTGPYTA-MVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319
                         +  S ++  N        V G  C + D+       K   IGD IS
Sbjct: 310 GVELEGQEPLYTSNHAFSLSVLNNLKEEEYVNVVGNLCTSLDVIANNVKLKKANIGDLIS 369

Query: 320 FEDVAGYNINRKN-WFNGINMPTIAVKNVDGTIK 352
             +   Y+ +     F+   +P    K  DG I+
Sbjct: 370 ISNAGSYSYSLSPLLFSSYELPKQYYKRKDGYIE 403


>gi|297161700|gb|ADI11412.1| diaminopimelate decarboxylase [Streptomyces bingchenggensis BCW-1]
          Length = 408

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 49/372 (13%), Positives = 100/372 (26%), Gaps = 37/372 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y+ D   L  + +          V+L  A K   A  +   L  ++ G   SS  E  
Sbjct: 27  PAYVYDLTALAEHAEAVRAALP-PAVELYYAAKANPALEILRALAPHVTGYEVSSGGESA 85

Query: 65  LGHEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
              E       A+    K       A+    +     +  +L +    A +  + + + +
Sbjct: 86  HVREAVPAHPLAFGGPGKTEAELRRALKLGVERFHVESEHELRQLAALADEEGRTVDILL 145

Query: 123 NPSVSYSKFILADPNR------------PFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170
             ++  +   L                 P                  + G+  H      
Sbjct: 146 RVNLPVADDALGAAALAMGGRPSPFGLDPDHIAERCLPLLTPGGPLRLRGIHAHLASGLD 205

Query: 171 SF---LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
           +       + +             ++  +++GGG+         +           + + 
Sbjct: 206 APALLAVATRITDWTRNLSARHGLRLTEVNVGGGMSVDYDRPDSRFDWAAYGRGLAEVAE 265

Query: 228 Q-----IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQ----- 276
           +     + +EPG A+        T VLD+  +      V      H+             
Sbjct: 266 RNPELTLRIEPGRALTVYCGWYVTEVLDLKHSGGEPFAVLRGGTHHMRTPAAKGHDHPFA 325

Query: 277 -------ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
                        P        + G+ C   D+         +++GDR++F     Y  N
Sbjct: 326 VLPADTWTHPWPRPGVRDEPVTLVGQLCTPKDVLARRAPAGELRVGDRVAFALAGAYAWN 385

Query: 330 RKNW-FNGINMP 340
             +  F     P
Sbjct: 386 ISHHDFLMHPRP 397


>gi|238059466|ref|ZP_04604175.1| diaminopimelate decarboxylase [Micromonospora sp. ATCC 39149]
 gi|237881277|gb|EEP70105.1| diaminopimelate decarboxylase [Micromonospora sp. ATCC 39149]
          Length = 429

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 53/349 (15%), Positives = 95/349 (27%), Gaps = 31/349 (8%)

Query: 30  VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAV 89
            K+  A+K  +   +   L  ++DG   +S  E  L                K   +   
Sbjct: 62  AKVCYAVKANSYRPVVAALAGHVDGFEVASAAEATLARSVRPDGLLVAAGPAKSDTLLRH 121

Query: 90  --LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVS--------YSKFILADPNRP 139
                 D I   ++ +L +    A +L + + + +  +                     P
Sbjct: 122 LIAHGVDMINVESLHELRRVDRIAAELDQPVAVTLRVNPRRVAVAGALAMGGKATQFGIP 181

Query: 140 FSRLGEKCKDKIESEIKNVNGLMFHNNCEN----KSFLCFSAMLKNIEKEFGHFITQIEW 195
            + + E  +        +V G   H    N             L+  +        Q+  
Sbjct: 182 EADVPEVLEQARALRRTDVVGFHLHVVGNNLDAATHVAYLRWCLQFAQDTAARHGVQLRV 241

Query: 196 ISLGGGIHFTD---KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDIS 252
           + +GGGI  +      + V+ F + + +       Q+ LEPG  +VT+       VLD+ 
Sbjct: 242 VDIGGGIGVSFGRGPHFDVRRFGELVADVRPPADCQVVLEPGRYLVTDCGWYAAEVLDVK 301

Query: 253 ENIKNLVIV-DSSVEAHVPDYLLY------------QESATIYPNTGPYTAMVCGRSCLA 299
                  +V    +                             P        V G  C  
Sbjct: 302 HAYGTWFVVLRGGINHFALPVSWDILHPFTVVPVARWPYPWPRPEVRDAPVTVVGELCTT 361

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPTIAVKNV 347
            D          V+ GD + F D   Y        F G         + 
Sbjct: 362 EDTLVRDMTVDRVRAGDLVVFPDAGSYGWEFALPEFLGHPRAERWTLDS 410


>gi|262197919|ref|YP_003269128.1| Orn/DAP/Arg decarboxylase 2 [Haliangium ochraceum DSM 14365]
 gi|262081266|gb|ACY17235.1| Orn/DAP/Arg decarboxylase 2 [Haliangium ochraceum DSM 14365]
          Length = 582

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 60/379 (15%), Positives = 119/379 (31%), Gaps = 29/379 (7%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            +++ +  L +N          A  ++   +K   +  + + +  +      +SL E+ L
Sbjct: 40  VWVLHECALRDNFAAWRE-LAGAAERICYPVKTNPSPAVLERIAAWGGRAECASLAELQL 98

Query: 66  GH-EKFGGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHK------- 116
                F  +   Y     + ++   L  +  T++ ++   L    ++A +          
Sbjct: 99  ARLAGFSEQRLLYGSPALNLQVAWSLLEDGGTVVVDSAEALASLDERASRAPALPPGRVL 158

Query: 117 ---KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVNGLMFHNNCEN 169
                 + I    +     L        + G   ++ IE         + GL  H   + 
Sbjct: 159 LRVNPSISIRYRKTQPWTDLIAHASQRGKFGIPSEEIIELVSGLRALRICGLHAHVGTQM 218

Query: 170 KSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFS 222
                F      ++   +         +  + LGGG+       +D+P       + E  
Sbjct: 219 DHIEPFAILAEHLIALADAITERSAQPLSILDLGGGLGIPCTAAEDFPRIAALAPVTEMV 278

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
                + +LEPG A+V NT  L   +  +         +  +    +    L Q    I 
Sbjct: 279 ANSGREAWLEPGSAMVGNTVGLLAAIASVKTMRDRRWAIADAGTDQLVKITLSQWYHQIL 338

Query: 283 PNTGPYTAM-----VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
              G    M     + G  C +GD+         ++ GD I  +    Y     N FNG 
Sbjct: 339 GPDGQPLPMQGDDALGGPLCFSGDVLLPATEVSGLRPGDPIFVQHTGAYFAAIANRFNGR 398

Query: 338 NMPTIAVKNVDGTIKAIRE 356
                 V   DG+ + I  
Sbjct: 399 RPGGTVVIRADGSAERIHR 417


>gi|310827389|ref|YP_003959746.1| putative pyridoxal-dependent decarboxylase [Eubacterium limosum
           KIST612]
 gi|308739123|gb|ADO36783.1| putative pyridoxal-dependent decarboxylase [Eubacterium limosum
           KIST612]
          Length = 407

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 59/387 (15%), Positives = 128/387 (33%), Gaps = 32/387 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           +YL+D ++  NN      I         +  + K          +N+        S  E+
Sbjct: 19  FYLLDSEQFKNNFTELKNIFSAIYPNFNIAYSYKTNYTPKFCKIVNELGGYAEVVSEMEM 78

Query: 64  MLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            L  +                  ++   L    T+  +++ +  + +D A  +   + + 
Sbjct: 79  ELALKCGVEPKRIIWNGPIKDSEKMREFLVAGGTVNSDSIDETKEIRDFANSVETILNVG 138

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--KNVNGLMFHNNCENKSFLCFSAML 179
           I  +              F   G+  K  +E     KN++ + FH +   +    + A  
Sbjct: 139 IRCNYDV--HDGVVSRFGFDITGDDFKRALEIVTTSKNLHFINFHCHFAKRQIEYWPARA 196

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS----------------E 223
           K +      F    E I +GGG+     +     F   + ++                 +
Sbjct: 197 KGMINVLDQFGVIPERIDIGGGLFGKMPESLKAQFTADIPDYQAYAEVAAAVFAEYFNDK 256

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
           +   ++ +EPG A+V +      +V  I       +      + ++    +      I+ 
Sbjct: 257 EIKPELVIEPGSALVGDCMKFVGSVKTIKNVRGKYIATVLGSQKNISMAGINPPMEVIHM 316

Query: 284 NTGP--YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
           N G       + G +C+ GD+  + +    +  GD I   +   Y++  K  F   N P 
Sbjct: 317 NEGKQYENLDMVGFTCIEGDVLNKDY-CGELAAGDVIIINNCGSYSLVMKPPFILPNFPV 375

Query: 342 IAVKN-----VDGTIKAIREFSYNDYY 363
           + + N      +G     R  +++D +
Sbjct: 376 VDICNMNIETGEGVELIKRGETFDDIF 402


>gi|283458340|ref|YP_003362962.1| diaminopimelate decarboxylase [Rothia mucilaginosa DY-18]
 gi|283134377|dbj|BAI65142.1| diaminopimelate decarboxylase [Rothia mucilaginosa DY-18]
          Length = 506

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 56/446 (12%), Positives = 117/446 (26%), Gaps = 84/446 (18%)

Query: 3   KTPYYLIDK----QKLLNNLDTALYIRKNAGVKL--LLALKCFAAWGMFDTLNQYMDGTT 56
           +TP Y+  +     +               G ++    A K F +  +     +      
Sbjct: 54  ETPQYVFSETTFRARARAYRTAFEQAFAEHGAQVSVYYAGKSFLSTAVARWATEEGLCLD 113

Query: 57  SSSLYEVMLG-HEKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKA-- 111
           ++S  E+ L    +  G   A +   K       A+ +    ++ ++V +L   +     
Sbjct: 114 TASGGELALALRAQVPGANIALHGNNKSEAELARAIRNGLGRVVADSVDELKLIECVYAE 173

Query: 112 -----------QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKC------------K 148
                            + +RI P V  S            + G               +
Sbjct: 174 LAAERVAEGEEPYAPVPVLIRITPGVHASTHESIATAHEDQKFGMSLQPGTAALAGLDEE 233

Query: 149 DKIES-------------------EIKNVNGLMFHNNCENKSFLCFSAML----KNIEKE 185
           +                       +  +  G+  H   +      F        + + + 
Sbjct: 234 ELEHWGVESTDSYAALAAAILNATDSLDFRGIHCHIGSQIFEAEGFEQAATTALEFMNRL 293

Query: 186 FGHFITQIEWISLGGGIHFTDKDYPVKDFC-----------QRLKEFSEKYSVQIYLEPG 234
                  +  + LGGG      +                      E        +  EPG
Sbjct: 294 NRDLGVTLPELDLGGGYGIGYTEADHPRSITEVTESIAASVAATCERLGMAIPHMSFEPG 353

Query: 235 EAIVTNTTTLNTTVLDISE----------NIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
            +I   +     TV  I             ++  V VD  +  +    L   + +    N
Sbjct: 354 RSISGPSGATLYTVGTIKNVSIEDENGEIRVRRYVSVDGGMSDNARPVLYESDYSVTLAN 413

Query: 285 TGP----YTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINM 339
             P      + V G+ C +GD+   + +    ++ GD ++      Y     + +N +  
Sbjct: 414 RAPAGEQVLSRVVGKHCESGDVVVRYCYLPADLQAGDILAVPATGAYCYVLGSNYNFLTR 473

Query: 340 PTIAVKNVDG-TIKAIREFSYNDYYN 364
           P +        +   IR     D   
Sbjct: 474 PPVIATAEGKPSRVMIRRQREEDMLA 499


>gi|222054242|ref|YP_002536604.1| Diaminopimelate decarboxylase [Geobacter sp. FRC-32]
 gi|221563531|gb|ACM19503.1| Diaminopimelate decarboxylase [Geobacter sp. FRC-32]
          Length = 439

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 56/410 (13%), Positives = 124/410 (30%), Gaps = 47/410 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP YL D+  + N+ +  L +    G+ +  A+K  +   +   +         SS+ E
Sbjct: 24  GTPIYLHDQAYIENSCEQLLNMPNAYGLHVRYAMKANSDRTVLRVVTNKGLDLDCSSVDE 83

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDA-----VLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
               H                  + +      ++         +++Q     D A+    
Sbjct: 84  AARAHAAGIPYSRMMLTTQEVPADEERAELESMIKAGLKYNVCSMTQFQLIADFAKANTI 143

Query: 117 KIGLRINP-----SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN-K 170
            + +R++P       S ++   ++ +     L +  K K  +  + +     H +  +  
Sbjct: 144 DLSIRVHPGAAGGGESATRDTGSEYSCFGVHLNDVPKVKALAAEQGLRFTQVHVHIGSGG 203

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ-- 228
               +   +         +      +S GGG+         +     L  ++++   +  
Sbjct: 204 DPEKWRENIDRELGFVKTYFPDATTVSFGGGLKVARMPGEKQADIASLGAYAKQRIEEFK 263

Query: 229 --------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-PDYLLYQESA 279
                   + +EPG  +V N+  + T ++D         ++       +    L   E  
Sbjct: 264 AATGRELKMEIEPGTYVVANSGHIVTRIIDKKLTNGMNFLIVDGGMELLTRPLLYGSEHP 323

Query: 280 ---------------TIYPNTGPYTAMVCGRSCLAGDIFGEF-------HFEKPVKIGDR 317
                             P  G  +  + GR C +GD                  +IGD 
Sbjct: 324 IAIVSQDSTLLSSEYDQTPTAGLKSFGIVGRCCESGDSVRLDKEGNIVPVMIIEPEIGDY 383

Query: 318 ISFEDVAGYNINRKN-WFNGINMPTIAVKNVDGTIKAIREFSY-NDYYNN 365
           +       Y+ +     +N    P   +K   G +  IR+       + N
Sbjct: 384 VVIGGTGAYSESMSPENYNSHRKPGAVMKTCSGELVLIRKKQVREQIFQN 433


>gi|297185888|gb|ADI24234.1| ornithine decarboxylase [Glomus intraradices]
          Length = 444

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 56/383 (14%), Positives = 103/383 (26%), Gaps = 53/383 (13%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++               V+   A+KC     +   L     G   +S  E+  
Sbjct: 44  FFVADLGEIYRQHLRWKTYLPR--VEPFYAVKCNGDPMLLRLLAALGTGFDCASKNEIQT 101

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             +         Y    K        S  D  +    +     K K      ++ +RI  
Sbjct: 102 VLDMGVSPSNIIYANPCKQASFIRFASEHDVKMITFDNADELHKIKRLFPKAQLVIRILA 161

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L                       NV G+ FH          +   ++    
Sbjct: 162 DDSKALIKLGAKFGASLNDTGFLLKTALELGLNVIGVSFHVGSGCYDENSYIDAIRRARF 221

Query: 185 EFG---HFITQIEWISLGGGI---HFTDKDYPVKDFCQRLKEFSEKYSVQ---IYLEPGE 235
            F            + +GGG    H +D+    +     L    +K+      +  EPG 
Sbjct: 222 VFNQASEMGFDFHLLDVGGGFSFSHKSDEGITFEKIAAVLGPAIDKHFPPNIRVIAEPGR 281

Query: 236 AIVTNTTTLNTTVL------------DISENIKNLVIVDSSVEAHVPDYLLYQ------- 276
                  T+ T V+             +     +   V ++ + H P ++ Y        
Sbjct: 282 YYAAPAFTIATHVIAKRTVCRDGNEEYVPSMNVDQSNVLATKDDH-PTFMYYINDGLYGS 340

Query: 277 -----ESATIYPN----------------TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIG 315
                    +                      Y   + G +C + D   +      + +G
Sbjct: 341 LYCILYDHQLVTPKVLTKGGSFLFGEILDEPEYNCFIWGPTCDSIDCVTKNGSLPELFLG 400

Query: 316 DRISFEDVAGYNINRKNWFNGIN 338
           D + FED+  Y I     FNG  
Sbjct: 401 DWLYFEDMGAYTIAAATKFNGFK 423


>gi|326436541|gb|EGD82111.1| ornithine decarboxylase [Salpingoeca sp. ATCC 50818]
          Length = 577

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 55/404 (13%), Positives = 100/404 (24%), Gaps = 67/404 (16%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           ++L D   +               V+   A+KC +   +  TL         +SL E+  
Sbjct: 104 FFLTDLGDVCRKHKRWQAHL--PMVEPFYAVKCNSDPAILGTLAALGANFDCASLGEIQA 161

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   +   +    K              +    ++    K         + LR+  
Sbjct: 162 ILNLGVSSDRVIFANPCKAIAHLRFAKQVGVRMMTFDNEFELLKIAKHYPGAALVLRVLA 221

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S S   L         +             +V G+ FH          F+  +     
Sbjct: 222 DDSRSACRLGLKFGADPAVTGHLLQLARQLGLDVVGVSFHVGSGATDARAFADAVARARA 281

Query: 185 EFGHF---ITQIEWISLGGGIHFTDKDYP------VKDFCQRLKEFSEKYSVQ------- 228
            F            + +GGG    D           +D  + L+    ++          
Sbjct: 282 VFDEAAALGFSPHLLDVGGGFPGDDPAATPAAAVRFEDIARELRSAFAEHFPPSAVPGLR 341

Query: 229 IYLEPGEAIVTN------TTTLNTTVLDI------------------------------S 252
           I  EPG   V +        T    V+D+                               
Sbjct: 342 IIAEPGWYYVASASSLAVCITSKRRVVDVTATTPTATTGATPTTPASNATPHPATEPPPK 401

Query: 253 ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP------------YTAMVCGRSCLAG 300
                   V  S    + D+   Q       N  P            + + V G +C + 
Sbjct: 402 FMYYVNDGVYQSFNCIIFDHARVQAQVLYTGNGVPAMDDEHLAAAVLHESSVWGPTCDSI 461

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344
           D          + +GD + F+++  Y     + FNG  +     
Sbjct: 462 DCVQASTMLPELDVGDWLVFDNMGAYTSCAASTFNGFALTKHVY 505


>gi|50546571|ref|XP_500755.1| YALI0B11330p [Yarrowia lipolytica]
 gi|17432156|emb|CAC80209.1| ornithine decarboxylase [Yarrowia lipolytica]
 gi|49646621|emb|CAG83002.1| YALI0B11330p [Yarrowia lipolytica]
          Length = 449

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 53/356 (14%), Positives = 96/356 (26%), Gaps = 26/356 (7%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   + +             V    A+KC     +   L     G   +S  E+  
Sbjct: 75  FFVADLGIVYSQFMRWSNCLPR--VTPFYAMKCNGDPKVLQLLAALGTGFDCASRNEIQT 132

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             +     +   Y    K        S+         +    +K        K+ LRI  
Sbjct: 133 ILDLGVSQDRIIYAHPCKVASYIRYASSVGVEKMVFDNAEELYKCAKYHPTAKLFLRIVT 192

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S S    +          +      +    NV G+ FH          F   ++N ++
Sbjct: 193 DDSQSLCQFSVKYGAALENTQSLLQLAKDLGLNVAGVSFHVGSGAGDPNAFLDAVRNAKR 252

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRL-KEFSEKYSVQIYLEPGEAIVTN 240
            F         +  + +GGG      +         L K F E+  V +  EPG   V+ 
Sbjct: 253 VFDQGAAIGMHLNTLDVGGGFSDDSFESSAAVLGDALDKYFPEESGVNLMAEPGRFFVSE 312

Query: 241 TTTLNTTVLDISENIKN-----------LVIVDSSVEAHVPDYL-------LYQESATIY 282
             T+ + V+                      ++  +  H             +       
Sbjct: 313 AFTIASHVIARRIIENQNKAMLYLNDGVYGNMNCILFDHQEPVPKVLTYQGKFMYGERYQ 372

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGI 337
                    V G +C   D   +       + +GD + F     Y +     FNG 
Sbjct: 373 KQKSSQDVSVWGPTCDGIDCISKSCQLPVLLDVGDWMYFTSFGAYTVAASTTFNGF 428


>gi|126138518|ref|XP_001385782.1| ornithine decarboxylase [Scheffersomyces stipitis CBS 6054]
 gi|126093060|gb|ABN67753.1| ornithine decarboxylase [Scheffersomyces stipitis CBS 6054]
          Length = 458

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 56/382 (14%), Positives = 113/382 (29%), Gaps = 53/382 (13%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++  +       +K   V+   A+KC     +   L         +S  E+  
Sbjct: 66  FFVCDLGEVYRSFGVWQ--QKLPQVQPHYAVKCNTNLEVIKLLASLGVNFDCASKNEIDT 123

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                   +   Y    K          +N +    +   +L+K K         I L  
Sbjct: 124 ILNLGISPDRIVYANPCKTNSFIRHASKANVNLTTVDNAQELHKLKKFHPDCGILIRLAT 183

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           +   +  +          + + E      +    NV G+ FH     K F      +++ 
Sbjct: 184 DDETAQCRLSTKFGCTLSAAINELLP-LAKELGLNVRGVAFHVGSGAKDFDSIYKAIRDS 242

Query: 183 EKEFG----HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS-----EKYSVQIYLEP 233
              F      +  ++  + +GGG      D      C  L +F       +  ++   EP
Sbjct: 243 RDVFNRAITEYGFEMSILDIGGGFELETFDESSSMVCSSLNKFFPADFVSQNGIKFIAEP 302

Query: 234 GEAIVTNTTTLNTTVL---------------------------DISENIKNLVIVDSSVE 266
           G  +V+N  TL   ++                            +  N+  ++    + +
Sbjct: 303 GRFMVSNAFTLAAHIIARRDLDLKATFVSEEDKQVSAMVYINDGVYGNMNCILFDHQNPQ 362

Query: 267 AHVPDYLLYQESATIY----------PNTGPYTAMVCGRSCLAGDIFGEFHFE-KPVKIG 315
           AHV  +                       G +   + G +C   D           V++G
Sbjct: 363 AHVLQHKNKFFYHQDEESDDQKLIDDDAKGEHHFSIWGPTCDGLDCVASKCTLSHDVEVG 422

Query: 316 DRISFEDVAGYNINRKNWFNGI 337
           D + F ++  Y       FNG+
Sbjct: 423 DWLYFPNLGAYTSAATTAFNGL 444


>gi|217971695|ref|YP_002356446.1| Diaminopimelate decarboxylase [Shewanella baltica OS223]
 gi|217496830|gb|ACK45023.1| Diaminopimelate decarboxylase [Shewanella baltica OS223]
          Length = 391

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 54/358 (15%), Positives = 115/358 (32%), Gaps = 26/358 (7%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+ +ID   +    D  +     A   +  A+K   A  +   L         +S+YE+
Sbjct: 30  TPFVVIDTSIIAKQYDDMVNSFPYAN--VYYAVKANPAAEILSLLKDKGSNFDIASIYEL 87

Query: 64  MLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
            +        +  +Y    K  +           ++ + S+ +  +  A++         
Sbjct: 88  DMVMNVGVTTDRVSYGNTIKKRQDVRAFYERGVRMYASDSEAD-LRMIAEEAPGSRIYVR 146

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLK 180
             +            +   +     +  + ++   +   G+ FH   + +    + + + 
Sbjct: 147 ILTEGTDTADWPLSRKFGCQNEMAYELLVLAQELGLEPFGISFHVGSQQRDIGAWDSAIG 206

Query: 181 NIEKEF----GHFITQIEWISLGGGIHFTDKDYPVK------DFCQRLKEFSEKYSVQIY 230
            ++  F          ++ I++GGG      D   +           LKE       QI 
Sbjct: 207 KVKSIFDRLRDEHSITLKMINMGGGFPANYIDKTNQLGVYAEQITHFLKEDFGDDLPQII 266

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATIYPNT 285
           LEPG ++++N   L + V+ IS+         +          +       +        
Sbjct: 267 LEPGRSLISNAGILVSEVVLISKKSYTALERWVFTDVGKFSGLIETMDEAIKFPIYTDRQ 326

Query: 286 GP-YTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338
           G     ++ G +C + DI  E   +     + IGDR+ +     Y        FNG  
Sbjct: 327 GELDKCVIAGPTCDSADIMYEHYSYGLPNDLAIGDRMYWLTAGAYTTTYSAVCFNGFP 384


>gi|196013976|ref|XP_002116848.1| hypothetical protein TRIADDRAFT_31500 [Trichoplax adhaerens]
 gi|190580566|gb|EDV20648.1| hypothetical protein TRIADDRAFT_31500 [Trichoplax adhaerens]
          Length = 390

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 63/358 (17%), Positives = 115/358 (32%), Gaps = 28/358 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+YL+D   ++       +     G++   ALKC   + +  TL     G   +S  E+ 
Sbjct: 15  PFYLVDIGDVI--YKYVTWTSMMPGIRPYFALKCHPDFQIIATLCSLGAGLDVASAGEIE 72

Query: 65  LGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +        E   Y+   K       A       + F++  +L + K         I L 
Sbjct: 73  IARALGLQDEDVVYSNTCKGISHIRAAAKEGLTQMSFDSEVELQRIKLTFPNAKLLIRLL 132

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           ++ S S  K                     +    NV G  FH          F+  ++ 
Sbjct: 133 VDDSHSILKTG--AKAGTPFSRVSHLFKVAKELGLNVVGTSFHIGSGCHDPSAFTKAIEK 190

Query: 182 IEKEF---GHFITQIEWISLGGGIHFT----DKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
            +K F        +++ + +GGG         ++            F     V+I  EPG
Sbjct: 191 SKKAFDIAKEQGLELKVLDIGGGFPGHANTLFENMCHAVNQAIDIHFPADSGVKIIAEPG 250

Query: 235 EAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPD------------YLLYQESAT 280
                 ++TL   ++   +  +  ++ I  + +  H+ D               Y     
Sbjct: 251 RFFAHTSSTLVANIIGKRLRYSDDDVQIEGTEMLYHINDGLIGSFLGTILARQKYLPQQL 310

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
           I      Y + + G SC A D          ++ G+ + +ED+  Y       FNG  
Sbjct: 311 IPTKGKSYRSSLWGPSCGAMDCLLSDCNLPEMEAGEWVYYEDMGAYTSCLTTNFNGFK 368


>gi|311894695|dbj|BAJ27103.1| putative diaminopimelate decarboxylase [Kitasatospora setae
           KM-6054]
          Length = 396

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 59/382 (15%), Positives = 106/382 (27%), Gaps = 37/382 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P YL D   L  ++           V+L  A K      +   L+  +DG   SS  E+ 
Sbjct: 14  PAYLYDLAALRAHVRRVRAALPER-VELYYAAKANPDGPLLTALHGLVDGYEVSSGGELA 72

Query: 65  LGHEKFGGETHAYNVAYKDCEIDA---VLSNCDTIIFNTVSQLNKFKDKAQKLHKKI-GL 120
             H        A+    K  E  A    L         +  +L+     A +    +  +
Sbjct: 73  HVHAVVPDAPLAFGGPGKSAEEIAAALRLPAVRRWHVESERELHALAAAADRPVDVLLRV 132

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESE---------IKNVNGLMFHNNCE--- 168
            +         +        +  G   +                  + G+  H       
Sbjct: 133 NLPVGDGALDGVALAMGGRPTPFGLDPERVERCLALLASPGFGHLRLRGIHAHLASGLAA 192

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFSEK 224
            +     + ++    +         + +++GGG+          +    F + L E  ++
Sbjct: 193 AEQLRLAARIVDWSAELAARHGLAFDEVNVGGGMAVDYADPEARFDWPAFGRGLAELLDR 252

Query: 225 YSVQIY-LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282
                  LEPG A+        T VLD+  +      V      H+              
Sbjct: 253 RPGLTIRLEPGRALTAYCGWYATEVLDVKHSHGEDFAVVRGGTHHLRTPATRGHTQPFTV 312

Query: 283 PNT------------GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                                VCG+ C   D+         ++ GDR+ F     Y  N 
Sbjct: 313 LPVPHWPHPWPRPAVTAAPVTVCGQLCTPKDVLASGVVVPELRAGDRLLFAMAGAYAWNI 372

Query: 331 KNW-FNGINMPT-IAVKNVDGT 350
            +  F     P    + ++DGT
Sbjct: 373 SHHEFLMHPRPAFHYLYHLDGT 394


>gi|317489942|ref|ZP_07948434.1| pyridoxal-dependent decarboxylase [Eggerthella sp. 1_3_56FAA]
 gi|316910940|gb|EFV32557.1| pyridoxal-dependent decarboxylase [Eggerthella sp. 1_3_56FAA]
          Length = 412

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 62/379 (16%), Positives = 121/379 (31%), Gaps = 34/379 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP YL D+Q L + +         + +KL  A+K      +    +   D   + S  E
Sbjct: 16  PTPLYLFDQQVLNDRITRLRASLP-SRIKLCYAMKANPF--IVREASALADCVEACSPGE 72

Query: 63  VML-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTI----IFNTVSQLNKFKDKAQKLHKK 117
           V++  +     E    +  +KD      L   D I       +  QL    + A    ++
Sbjct: 73  VLICANAGVPFEKIVLSGVWKDRRCLDDLFQADRIPHRFTIESSQQLKDLVELANAYRRR 132

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
           + +    S S ++F +          G K    I      + G+ +++  +  S      
Sbjct: 133 VNVLFRLS-SENQFGVDSATLKELIAGCKDDPFIS-----IQGIQYYSGTQKTSLKKLDR 186

Query: 178 MLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--------- 224
            L  + +           ++  I  G G+     D   +       E   +         
Sbjct: 187 ELSKLHRIVAEVEAACSVKLNEIEYGPGLPVEYFDENEERARSAQDEPVAELATLLDGFP 246

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
           +   I LE G +I  +     T+V+D+         +       +  Y       +    
Sbjct: 247 FEGDIVLELGRSIAADCGAYLTSVVDVKTTSGQNYAIVDGGMHQISYYGHSMAMKSPVFR 306

Query: 285 T------GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGI 337
                        +CG  C   DI  +      + +GD ++F     Y        F   
Sbjct: 307 KVGATAGAAQPWNICGALCTVNDILAKQAPIVDLSVGDVLAFSRAGAYCATEGRALFLSR 366

Query: 338 NMPTIAVKNVDGTIKAIRE 356
           ++P++ V++V G ++  R 
Sbjct: 367 DLPSVVVRDVSGNMRIARH 385


>gi|123403224|ref|XP_001302198.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain
           containing protein [Trichomonas vaginalis G3]
 gi|121883464|gb|EAX89268.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain
           containing protein [Trichomonas vaginalis G3]
          Length = 397

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 55/368 (14%), Positives = 112/368 (30%), Gaps = 26/368 (7%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66
           ++ D  K+  +            VK   A+KC     +   L     G   +S  E+ + 
Sbjct: 34  WIADLNKVRYSTQLWESYLPR--VKAHYAVKCCDEPNILRFLADRGFGFDCASKKELQMI 91

Query: 67  HE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
            E         ++      +  + A     D + F+T  +L K          ++ LR+ 
Sbjct: 92  TELGVDANRIVFSHPLKNHEALVYAKELGVDRMAFDTEEELRKI--LRYYPEAEVFLRVK 149

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC---ENKSFLCFSAMLK 180
           P  + +K  L+                      N  G  FH      +  +F      + 
Sbjct: 150 PKFTNAKIPLSKKFGAAPEDVPNLLQLAHELGANFIGFSFHVGSLCDDINTFRTALQYVS 209

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPG 234
            ++ +       + +I +GGG    +                 + EF  +  ++   EPG
Sbjct: 210 ELKVKAEELGLNVCFIDIGGGFLPPNAPCNNSFKEITETINAAIDEFFGENEIEFIGEPG 269

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSS----------VEAHVPDYLLYQESATIYPN 284
               +    L   V+    ++        S            A + D+            
Sbjct: 270 RFFASEYMDLILPVIGAKVHVDGHGEKTQSIYIPDGIYGAFNALIYDHAEPHFEIHTEGE 329

Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344
           +      + G++C + DI  E      +++GD +     + Y  +   +FNG +   + V
Sbjct: 330 SEKLPTTIWGQTCDSADIVYEDMMWPELEVGDLLIIRRFSAYTYSPTAFFNGFHHHPVVV 389

Query: 345 KNVDGTIK 352
            N +    
Sbjct: 390 LNANEEDI 397


>gi|319957271|ref|YP_004168534.1| orn/dap/arg decarboxylase 2 [Nitratifractor salsuginis DSM 16511]
 gi|319419675|gb|ADV46785.1| Orn/DAP/Arg decarboxylase 2 [Nitratifractor salsuginis DSM 16511]
          Length = 447

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 58/390 (14%), Positives = 119/390 (30%), Gaps = 33/390 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLL--ALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P ++  +Q++            +    ++   + K      + +  ++        S 
Sbjct: 45  GSPLFVFSQQEIEEKYHRLHEAFSSRYPDVVFGWSYKTNYLNAICNLYHKLGSIAEVVSE 104

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKI 118
           +E          G+   +N  YK  E   V       I  + + ++N  ++ A++L  KI
Sbjct: 105 FEYQKARALGIEGKDIIFNGPYKPKEALKVAVEEGAKIHIDHLFEINDLEEIARELGVKI 164

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV---NGLMFHNNCENKSFLCF 175
            + I  ++    +            GE            +    GL  H          +
Sbjct: 165 PVAIRVNMDTGIYPQWSRFGFNYESGEAIDAIERIHSGGLLELTGLHSHIGTFMLDASAY 224

Query: 176 ----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD----------------KDYPVKDFC 215
               + ++    +    F  +IE+I +GGG    +                 DY  +   
Sbjct: 225 GKETAKLMDLKHQAEERFGYRIEYIDIGGGFASKNRLKGVYQSPDVIVPTPDDYAQQITE 284

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVL-DISENIKNLVIVDSSVEAHVPDYLL 274
                       ++YLE G  ++     L TTV             +  +    +     
Sbjct: 285 AIYTHNKSDTLPRLYLETGRHLIDEAGYLLTTVQAYKRFPDGMKGYILDAGVNLLYTATW 344

Query: 275 YQESATIYPNTG--PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
           Y  +  +          +M+ G  C+  DI  E     P+  G  I+   V  YN  +  
Sbjct: 345 YNFNFELDRRYEGLNEPSMLNGPLCMNIDILSENIMLPPLDRGTVITIGPVGAYNYTQSM 404

Query: 333 WFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
            F     P   + + +  +  I+E   +D 
Sbjct: 405 QFIRY-RPAAVLIDKERNVHLIKEP--DDL 431


>gi|281206013|gb|EFA80202.1| group IV decarboxylase [Polysphondylium pallidum PN500]
          Length = 443

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 56/405 (13%), Positives = 135/405 (33%), Gaps = 49/405 (12%)

Query: 9   IDKQKLLN-------NLDTALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYMDGTTS 57
           ID++           NLD    + + A  +L     +A+K     G+     +   G   
Sbjct: 36  IDEKIFEKDPLILLYNLDHFRSLAREANEQLGGIQSMAIKSNPVMGLMKEAVRCGLGAEV 95

Query: 58  SSLYEVMLG-HEKFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL- 114
           +S  E+ +     F  E   Y +      E++  L+    +  +   +L++     +K+ 
Sbjct: 96  ASFGELKIAEAAGFPVEKIIYDSPIKSQEELEYALNLGVKLNVDNFQELDRIIAIVEKMS 155

Query: 115 -----HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-----KIESEIKNVNGLMFH 164
                   +G+R+NP V+  K+       P S+ G   ++     ++    K +N +  H
Sbjct: 156 AEKLATVCVGIRVNPQVAAGKYQDLSTGVPTSKFGIGMENSERIVQMYQTYKWLNNVHLH 215

Query: 165 NNCE----NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
              +    +++      + + +E        QI + ++GGG+              +   
Sbjct: 216 VGSQGFEMSQTSDAIVKVFELVEHINQLTNKQIRFFNIGGGLSVNFDSEKDTPTFSQYAA 275

Query: 221 FSEKY-------SVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDY 272
              +           +  E G +    +  + + V    ++  +++ ++ +     +   
Sbjct: 276 HLREKLPRLFSGDYVVISEFGRSYFAKSGVVVSKVEYTKQSGGRDIGVIHAGANLFIRTI 335

Query: 273 LLY-----------QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321
             +            E   +  + G     + G  C A D+  +      +   D I   
Sbjct: 336 YQHPLWKLRVTAFSHEGQYLDGSNGSSIYDLAGPCCFAADLLVKERKLPHLNPNDFIMVH 395

Query: 322 DVAGYNINRKNWFNGINMPTIAVKNVD-GTIKAIRE-FSYNDYYN 364
           D   Y  +  + +N    P I   + +   ++ I++  +  D   
Sbjct: 396 DSGAYMYSSYSHYNLRLAPPIYAIDSEVQNLRLIKKGETIEDKIR 440


>gi|152985411|ref|YP_001348455.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa PA7]
 gi|150960569|gb|ABR82594.1| diaminopimelate decarboxylase [Pseudomonas aeruginosa PA7]
          Length = 394

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 55/350 (15%), Positives = 103/350 (29%), Gaps = 30/350 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            YL D   L   +            +L  A K      +  TL   +DG  ++S  E+  
Sbjct: 24  AYLYDLPALAERVRAMRAALP-PACELFYAAKANPEAAILRTLAPLVDGFEAASGGELAW 82

Query: 66  GHEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
             +        +      +     A+L+N D     ++ +L +    A++  ++I L + 
Sbjct: 83  LRQHCPEHPLIFGGPGKLESELDAALLANLDAFHVESLHELRRLASLARRRERRIPLLLR 142

Query: 124 PSVSYSKFILADPNRPF---------SRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174
            ++   +   +                 L E      E     + GL FH          
Sbjct: 143 LNLKLDETPDSRLVMGGKPTPFGLDEEALDEALALLREEPALELKGLHFHLLSHQLDVSA 202

Query: 175 FSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSEKYS 226
              +++   + F    G     +  +++GGG+    +D    +    FC  L    ++  
Sbjct: 203 HLQLVRAYCRAFLRIAGESGLPLSLLNVGGGMGIDYRDFARSFDWSGFCDALPALLDEEG 262

Query: 227 VQIY---LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282
           +       E G  I          VLDI  N   L  V      H         +   + 
Sbjct: 263 MGGIRLRFEVGRYIAAPCGYYVMEVLDIKRNHGELFAVARGGTHHFRTPAAQGHDHPFVV 322

Query: 283 PNT------GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
                          + G+ C   D+         + +GD + F     Y
Sbjct: 323 VRGERAAEIEDQAVTLVGQLCTPKDVLARRQPVAALAVGDLLVFTLAGAY 372


>gi|291439206|ref|ZP_06578596.1| lysine/ornithine decarboxylase [Streptomyces ghanaensis ATCC 14672]
 gi|291342101|gb|EFE69057.1| lysine/ornithine decarboxylase [Streptomyces ghanaensis ATCC 14672]
          Length = 460

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 58/407 (14%), Positives = 113/407 (27%), Gaps = 45/407 (11%)

Query: 3   KTPYY-LIDKQKLLNNLDTALYIRK-----NAGVKLLLALKCFAAWGMFDTLNQYMDGTT 56
            TP   L+D   +  +        +        V    A+K      +   L +   G  
Sbjct: 38  DTPLVALLDVAGIRESAAELRAAFEAVTPPGTPVLHAFAVKASPLVAVLRLLREEGIGAE 97

Query: 57  SSSLYEVMLGHE-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK--DKAQ 112
            +S  E+ L        E     + A    E+   L+    +  +   +L +     ++ 
Sbjct: 98  VASPGELALARAAGVEPERTVLDSPAKTPDELRQALALGIAVNADNPQELARLDALMQST 157

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFH 164
                +G+R+NP +              S+ G   +D        +   +   +  L  H
Sbjct: 158 DTRSPLGIRVNPQIGSGSIEALSTATATSKFGVALRDEGAREWVVRAYLDRPWLTRLHTH 217

Query: 165 NNCE----NKSFLCFSAMLKNIEKEFGHFITQ-IEWISLGGGIHFTDKDYP----VKDFC 215
              +    +      +      E+       Q I+ + +GGG+               + 
Sbjct: 218 TGSQGIALSLMARGVAEAYALAEEVNRRAGRQQIDTVDIGGGLPVNFASDTTDPTYTQYA 277

Query: 216 QRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDIS---------ENIKNLVIVDS 263
           + L E           +  E G +++    T+   V              +    V   +
Sbjct: 278 RLLSEEVPGLFDGRYGLVTEFGRSLLAKHGTMVARVEYAKSAGGRPVAVTHAGVQVATRT 337

Query: 264 SVEAHVPDYLLYQESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFED 322
                     +    A   P  GP     V G +C AGD+         ++ GD  +  D
Sbjct: 338 VYAPGAWPLRVAAYDAKGRPKEGPAVVQDVAGPACFAGDLLARGQSLPLLEQGDHAAVLD 397

Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGT-----IKAIREFSYNDYYN 364
              Y       +N +  P +     DG          R  +  +   
Sbjct: 398 TGAYYFAHHYAYNSLPRPGVYGFVPDGAGGVSFAVVRRAQTVEEIVA 444


>gi|239930837|ref|ZP_04687790.1| lysine/ornithine decarboxylase [Streptomyces ghanaensis ATCC 14672]
          Length = 480

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 58/407 (14%), Positives = 113/407 (27%), Gaps = 45/407 (11%)

Query: 3   KTPYY-LIDKQKLLNNLDTALYIRK-----NAGVKLLLALKCFAAWGMFDTLNQYMDGTT 56
            TP   L+D   +  +        +        V    A+K      +   L +   G  
Sbjct: 58  DTPLVALLDVAGIRESAAELRAAFEAVTPPGTPVLHAFAVKASPLVAVLRLLREEGIGAE 117

Query: 57  SSSLYEVMLGHE-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK--DKAQ 112
            +S  E+ L        E     + A    E+   L+    +  +   +L +     ++ 
Sbjct: 118 VASPGELALARAAGVEPERTVLDSPAKTPDELRQALALGIAVNADNPQELARLDALMQST 177

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFH 164
                +G+R+NP +              S+ G   +D        +   +   +  L  H
Sbjct: 178 DTRSPLGIRVNPQIGSGSIEALSTATATSKFGVALRDEGAREWVVRAYLDRPWLTRLHTH 237

Query: 165 NNCE----NKSFLCFSAMLKNIEKEFGHFITQ-IEWISLGGGIHFTDKDYP----VKDFC 215
              +    +      +      E+       Q I+ + +GGG+               + 
Sbjct: 238 TGSQGIALSLMARGVAEAYALAEEVNRRAGRQQIDTVDIGGGLPVNFASDTTDPTYTQYA 297

Query: 216 QRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDIS---------ENIKNLVIVDS 263
           + L E           +  E G +++    T+   V              +    V   +
Sbjct: 298 RLLSEEVPGLFDGRYGLVTEFGRSLLAKHGTMVARVEYAKSAGGRPVAVTHAGVQVATRT 357

Query: 264 SVEAHVPDYLLYQESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFED 322
                     +    A   P  GP     V G +C AGD+         ++ GD  +  D
Sbjct: 358 VYAPGAWPLRVAAYDAKGRPKEGPAVVQDVAGPACFAGDLLARGQSLPLLEQGDHAAVLD 417

Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGT-----IKAIREFSYNDYYN 364
              Y       +N +  P +     DG          R  +  +   
Sbjct: 418 TGAYYFAHHYAYNSLPRPGVYGFVPDGAGGVSFAVVRRAQTVEEIVA 464


>gi|325679833|ref|ZP_08159404.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein
           [Ruminococcus albus 8]
 gi|324108503|gb|EGC02748.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein
           [Ruminococcus albus 8]
          Length = 411

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 54/382 (14%), Positives = 118/382 (30%), Gaps = 36/382 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP YL D                   V L  ++K      +   L +        S  E
Sbjct: 33  GTPCYLFDTDVFAKRAADVSAAFGER-VGLCYSIKANPF--LLAALPEVFRYIEVCSPGE 89

Query: 63  VMLG-HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + +        +   ++     ++    A           +   +    + A K   ++ 
Sbjct: 90  LSICEKIGAPLDKIIFSGVNKTEEDVARAYADGVAIFTAESRLHVRLINNCAVKNGGRVK 149

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           L +  +               + L +    + +    ++ GL +    +       +  L
Sbjct: 150 LILRLAHGSQ------FGMDKADLTDIIAHREQFAGVDIIGLHYFTGTQKTKVKTIAKEL 203

Query: 180 KNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDF--------CQRLKEFSEKYSV 227
           + +++        +  + + I  G G+         +D          + +K F+EKY +
Sbjct: 204 ELLDEFCQELESGYGFKAQHIEYGTGLGVEYYKDFTEDSDLALLAEAAEVVKAFAEKYPL 263

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-----DYLLYQESATIY 282
            +  E G        +  T V+DI        ++      H+        +     + + 
Sbjct: 264 TV--EMGRFFAAQCGSYLTKVMDIKTTNDINYVICDGGINHLNYYGQNMAMKVPPISLVN 321

Query: 283 PNTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGINM 339
              G  T    +CG  C   DI         +K GD ++F+    Y++    + F    M
Sbjct: 322 GTDGENTSDYCLCGSLCTTADILVRKVTLPELKRGDILAFDKCGAYSVAEGISAFLSRAM 381

Query: 340 PTIAVKNVDGTIKAIRE--FSY 359
           P +A+ +    ++ +RE   +Y
Sbjct: 382 PKVALYSKAEGLQLVRELTETY 403


>gi|157103349|ref|XP_001647940.1| ornithine decarboxylase [Aedes aegypti]
 gi|108884772|gb|EAT48997.1| ornithine decarboxylase [Aedes aegypti]
          Length = 437

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 55/376 (14%), Positives = 102/376 (27%), Gaps = 27/376 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +L +   L+       +++    VK   A+K      + +       G   +S+ EV 
Sbjct: 36  PLHLTEVDTLVK--RHYEWLQHLPRVKPYYAVKSNDEASLVEATVLMGLGYDCASMAEVR 93

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTI-IFNTVSQLNKFKDKAQKLHKKIGLRI 122
              E     E   +    K             + +F++  +L K      +    I  R 
Sbjct: 94  RMLELGVERERIIFAQPQKTIVSLQYARKHKILTVFDSECELRKIHQHYPEAEVLIRYRF 153

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF---SAML 179
           +   S             +   +      +     V G  F+          F       
Sbjct: 154 DSKKSKVNLGSKFGCETENES-KSLLHVAKQLGIKVVGWCFNVGSGCTDADVFYAAIKKG 212

Query: 180 KNIEKEFGHFITQIEWISLGGGI----HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
           + I         +   I LGGG         ++Y V       + +     + I+ EPG 
Sbjct: 213 REIHDYATSIGFKFRMIDLGGGFMGDKGCGIEEYAVHINRALEECYPASEDIFIFAEPGR 272

Query: 236 AIVTNTTTLNTTVLDISENIKNLV-----IVDSSVEAHVPDYLLYQES-----ATIYPNT 285
                  T  + V                 V       +                I   +
Sbjct: 273 YYCAAAVTSISPVHGKRILCNENDPLKIEQVFYYFNDGMYGTFYSPRYRNQTLYPIVWKS 332

Query: 286 G-----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
           G      Y   + G +C   D F +      +++ D + FE+   Y       FNG  +P
Sbjct: 333 GGNLGTTYKTTLFGPTCDGNDFFAKDIDLPELEVSDFVVFENQGAYARVHSCRFNGFCLP 392

Query: 341 TIAVKNVDGTIKAIRE 356
            +       T + + +
Sbjct: 393 KVINYMRKSTWELLEK 408


>gi|149180385|ref|ZP_01858890.1| probable diaminopimelate decarboxylase protein [Bacillus sp. SG-1]
 gi|148852577|gb|EDL66722.1| probable diaminopimelate decarboxylase protein [Bacillus sp. SG-1]
          Length = 398

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 52/370 (14%), Positives = 109/370 (29%), Gaps = 36/370 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            Y+ D + L  +              L  A+K      + + L+  +DG  ++S  E++ 
Sbjct: 24  AYVYDLKGLREHARRLKDSLPAF-CSLYYAVKANPDNRILEALSGIVDGFDTASEGEILK 82

Query: 66  GHEKFGGETHAYNVAYKDCEIDAVLSNCDTI-IFNTVSQLNKFKDKAQK----LHKKIGL 120
            H+           A KD E+  +           +   L +     ++    L   I +
Sbjct: 83  VHKLSALPVIFAAPAKKDRELAYLADGSLRFMNVESERDLYRLNRVGKEAGKALPVLIRI 142

Query: 121 RINPSVSYSKFIL----ADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
            +  +VS S   +            ++    +   E     +NG  FH    N +     
Sbjct: 143 NLQHNVSNSSHKMSGVPTQFGIEERKIPSILEKLSEFPYIELNGFHFHAMSNNLNAEEHL 202

Query: 177 AMLKNIEKEFGHFITQIE--------WISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
             +K   ++   +                +G       + +    F + L +  E++   
Sbjct: 203 IFVKRCLEKSLEWKKTFSLDLGVVNIGGGIGVNYENPSESFDWTFFSEGLHQMQEEFEAN 262

Query: 229 ---IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------------D 271
              + +E G  +        T V+D+ +N      +      H+                
Sbjct: 263 QLELIMELGRYLTAQCGFYITEVIDLKQNYDEWFPLVRGGTHHLRLPAAWKMSHPFSVYP 322

Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
              ++E+    P        + G  C   D+     +   +K+GD + F     Y     
Sbjct: 323 VTEWKEAPLPRPAVKGERITIAGELCTPNDLLVRKQYVDDLKVGDLVMFHLSGAYGWTIS 382

Query: 332 NW-FNGINMP 340
           +  F     P
Sbjct: 383 HHDFLSHPAP 392


>gi|330863543|emb|CBX73659.1| diaminopimelate decarboxylase [Yersinia enterocolitica W22703]
          Length = 309

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 44/301 (14%), Positives = 90/301 (29%), Gaps = 35/301 (11%)

Query: 96  IIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK----- 150
           +   ++  L++    A      + LR+NP   +      +     S+ G   +D      
Sbjct: 8   VNAGSIDMLDQLGLHA--SGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWHEDLPQAIA 65

Query: 151 -IESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY 209
            I+     + G+  H       +     +   + ++       I  IS GGG+    +  
Sbjct: 66  KIQQYGLKLVGIHMHIGSGVD-YQHLEQVCDAMVQQVIALGQDISAISAGGGLSIPYQFG 124

Query: 210 PVKDFCQRLKEFSEK----------YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNL 258
             +   +                  + V + +EPG  +V     L   V  + +   ++ 
Sbjct: 125 DDEIDTEHYYGLWNSARERIAAHLGHPVSLEIEPGRFLVAEAGVLIAQVRAVKNMGRRHY 184

Query: 259 VIVDSSVEAHVPDYLLYQESA--------TIYPNTGPYTAMVCGRSCLAGDIFG------ 304
           V+VD+     +   +                  N      +V G  C +GD+F       
Sbjct: 185 VLVDAGFNDLMRPAMYGSYHHISVLPADGRSLANEPLIDTVVAGPLCESGDVFTQEAGGG 244

Query: 305 -EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
            E        IGD + F D   Y  +  + +N   +    +          R  +  +  
Sbjct: 245 LETRKLPAANIGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFEQGQPRLIRRRQTIEELI 304

Query: 364 N 364
            
Sbjct: 305 A 305


>gi|318058551|ref|ZP_07977274.1| diaminopimelate decarboxylase [Streptomyces sp. SA3_actG]
 gi|318080248|ref|ZP_07987580.1| diaminopimelate decarboxylase [Streptomyces sp. SA3_actF]
          Length = 448

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 55/396 (13%), Positives = 111/396 (28%), Gaps = 40/396 (10%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLL-LALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67
           +D   +                 L   A+K  +   + + LN+   G   +S  E+ L  
Sbjct: 32  VDVTGVREAARELRAAFAGPAPVLHTFAVKAASLVPVLELLNEEGVGCEVASPGELELAR 91

Query: 68  E-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKIGLRIN 123
                       + A    E+   L++   +  +   +L +             +G+R+N
Sbjct: 92  AAGVPASRIVLDSPAKTVAELRDALAHGIAVNADNPQELARVDALLAEGPTDSPLGVRVN 151

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFHNNCE----NKS 171
           P V              S+ G   +D        +   E   +  L  H   +       
Sbjct: 152 PQVGTGSIGAMSTATATSKFGVALRDPGAEDWLVRQYVERPWLTRLHTHTGSQGVALELM 211

Query: 172 FLCFSAMLKNIEKEFGHFI-TQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY----- 225
                 +    E+        Q++ I +GGG+    +   +        +   +      
Sbjct: 212 AESVRIVYGLAERINREVGGQQVDTIDIGGGLPVNFEGEEITPRFAAYAKLLRETVPGLF 271

Query: 226 --SVQIYLEPGEAIVTNTTTLNTTVLDISEN------IKNLVIVDSSVEAHVPDYLLYQE 277
                I  E G +++     +   V     +      + +     ++    VPD    + 
Sbjct: 272 DGRYTIVTEFGRSLLAKQGFVAALVEYTKTSGGRRIAVTHAGAQVATRTVFVPDSWPLRV 331

Query: 278 SATIYPNTGPYTAMVC----GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
           +A     T   +  +     G  C AGD+         +  GD I+  D   Y  +    
Sbjct: 332 AAFAPDGTLKESPDLVQDVAGPCCFAGDLVARARTLPELSPGDLIALWDTGAYYFSTHFA 391

Query: 334 FNGINMPTI-AVKNVDGTI----KAIREFSYNDYYN 364
           +N +  P +      D          R  S  +   
Sbjct: 392 YNSLPRPAVHGFWTDDEGRTRFATIRRGQSLAELLA 427


>gi|224372743|ref|YP_002607115.1| Orn/DAP/Arg decarboxylase, family 2 [Nautilia profundicola AmH]
 gi|223589196|gb|ACM92932.1| Orn/DAP/Arg decarboxylase, family 2 [Nautilia profundicola AmH]
          Length = 444

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 59/384 (15%), Positives = 126/384 (32%), Gaps = 32/384 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P ++  ++ +             +   V+   + K      +    ++        S 
Sbjct: 44  GSPLFVFSERIIEEKYHEFKNAFTSRYPEVEFWWSYKTNYLDAICKIYHKLGSKAEVVSE 103

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKI 118
           +E          G+   +N  YK  +           I  +   ++N  ++ A++L  +I
Sbjct: 104 FEYEKARRLGIEGKNIIFNGPYKPKDALKKAVEEGAKIHIDHWYEINDLEEIAEELGIEI 163

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
            + I  ++    +            GE   D ++   +     +   +    +F+  +  
Sbjct: 164 PVAIRCNMDTGVYPQWSRFGFNIDNGE-AYDAVKRIYEGKKLYLTGLHSHIGTFMLSANA 222

Query: 179 LKNIEKEF--------GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS---- 226
             N  K+           F  +IE+I +GGG    ++   V    + +   +++Y+    
Sbjct: 223 YANETKKLIELKNKIEKDFGYEIEYIDVGGGFASKNRLKGVYQAPEVIVPSADEYAEAIT 282

Query: 227 -----------VQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLL 274
                       ++YLE G A++     L TTV             +  +    +     
Sbjct: 283 NAIFETNKGKLPKLYLETGRALIDEAGFLLTTVFAAKRMPDGKKSYIVDAGVNLLYTAFW 342

Query: 275 YQ-ESATIYPNTG-PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
           Y  E A      G    + + G  C+  D+  E     P+K G  +S   V  YN+ +  
Sbjct: 343 YNFEIALDKRYEGLNEPSQINGPLCMNIDVISENIMLPPLKRGSVLSIWPVGAYNVTQSM 402

Query: 333 WFNGINMPTIAVKNVDGTIKAIRE 356
            F     P I + + +     I+E
Sbjct: 403 QFIRY-RPRIILIDKNSNTHLIKE 425


>gi|238064162|ref|ZP_04608871.1| decarboxylase [Micromonospora sp. ATCC 39149]
 gi|237885973|gb|EEP74801.1| decarboxylase [Micromonospora sp. ATCC 39149]
          Length = 411

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 56/387 (14%), Positives = 103/387 (26%), Gaps = 35/387 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQY---MDGTTSSS 59
            TP Y+ D  ++             +G  L  A+K      +   L            SS
Sbjct: 12  GTPLYVYDLDRVAEARSRLFAALP-SGFDLFYAVKANPHPDVAGALRDGPGPACRAEISS 70

Query: 60  LYEVMLGHEKFGG--ETHAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKA--QKL 114
             E+           E         D E+  A+          + + L +    A     
Sbjct: 71  TGELDAALAAGYAAGECLYTGPGKTDTELAVAIARGVRLFSAESPTDLRRIGAVAERYGA 130

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFS------RLGEKCKDKIESEIKNVNGLMFHNNC- 167
             +  LRIN + + +   +    RP         L     +   +    + G  F     
Sbjct: 131 VAECLLRINCTTAGAATGIRMMGRPSQFGLDLESLPALLPELRATRGARLVGAHFFTMSN 190

Query: 168 ---ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
              E+     F  +++            +E + LGGG               +L+   E+
Sbjct: 191 AGDESNLVAEFEQVVELAAGLAVDSGLPLELLDLGGGFAAPYAVPGAPMVYPKLRTELER 250

Query: 225 Y-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL 273
                       + ++  E G  +V    TL   V+++        ++  +    +    
Sbjct: 251 LLDLNLPRWRTGTPRLACESGRYLVAGCGTLLCGVVNVKRGRGQTYVIVDAGINAIGGLS 310

Query: 274 LYQESATIYPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
                  +            A + G  C  GD+ G       +  GD +   +V  Y I 
Sbjct: 311 GLGRLLPMAVCLDGADATERASLVGPLCTPGDLLGRDVQVPVLAAGDVVRIPNVGAYGIT 370

Query: 330 RK-NWFNGINMPTIAVKNVDGTIKAIR 355
                F     P          +   R
Sbjct: 371 ASLLGFLSRPAPAEVTVRNGEVVSVSR 397


>gi|307213747|gb|EFN89085.1| Ornithine decarboxylase [Harpegnathos saltator]
          Length = 400

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 54/378 (14%), Positives = 111/378 (29%), Gaps = 29/378 (7%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D  K++   D    I K   V    A+K  +   +   L         +S  E+  
Sbjct: 30  FYIADIGKVIAKHDEW--IAKMPRVVPHFAIKSNSDPTVIKVLAALDACFDCASKQEIKQ 87

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             +    G+   +    K           D       S+   FK K      KI +RI  
Sbjct: 88  VMQHGVHGDRIIFAHPAKYPSHIIYAKKVDVKQMTVDSEYELFKIKDFFPEAKIVIRIRC 147

Query: 125 S-VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS----AML 179
              +    +             +     +    N++G  FH          +S       
Sbjct: 148 DSKNTPVVLGMKFGCESHEEAVRLIQLTKDLGLNLHGFSFHVGSPCCEPEAYSRGITMCK 207

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--------YSVQIYL 231
           + I          ++ I +GGG    +    + +    + +  +              Y 
Sbjct: 208 QLIIVSKSIGCDDVQLIDIGGGFP-GESGTNIDEIASVVNKAIQDVDPSIRVISEPGTYY 266

Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT----GP 287
                 + +       +L   E ++   I          + L  Q       +       
Sbjct: 267 VASSFTLASYLHSKRMILKDGETMRMYYINCGVFNGFTEELLDLQARVPQLLSEPVSSEK 326

Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
           +++ V G +  + D+  +      + IGD + ++D+  Y I+    FNG  +P +     
Sbjct: 327 FSSCVWGSTLHSYDLIVKDMLLPELNIGDWLIWKDMGAYAISLSTTFNGFEIPVVI---- 382

Query: 348 DGTIKAIREFSYNDYYNN 365
                 +R+  + D+   
Sbjct: 383 ----PIVRKSQWEDFRAR 396


>gi|302519173|ref|ZP_07271515.1| diaminopimelate decarboxylase [Streptomyces sp. SPB78]
 gi|302428068|gb|EFK99883.1| diaminopimelate decarboxylase [Streptomyces sp. SPB78]
          Length = 472

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 55/396 (13%), Positives = 111/396 (28%), Gaps = 40/396 (10%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLL-LALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67
           +D   +                 L   A+K  +   + + LN+   G   +S  E+ L  
Sbjct: 56  VDVTGVREAARELRAAFAGPAPVLHTFAVKAASLVPVLELLNEEGVGCEVASPGELELAR 115

Query: 68  E-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKIGLRIN 123
                       + A    E+   L++   +  +   +L +             +G+R+N
Sbjct: 116 AAGVPASRIVLDSPAKAVAELRDALAHGIAVNADNPQELARVDALLAEGPTDSPLGVRVN 175

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFHNNCE----NKS 171
           P V              S+ G   +D        +   E   +  L  H   +       
Sbjct: 176 PQVGTGSIGAMSTATATSKFGVALRDPGAEDWLVRQYVERPWLTRLHTHTGSQGVALELM 235

Query: 172 FLCFSAMLKNIEKEFGHFI-TQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY----- 225
                 +    E+        Q++ I +GGG+    +   +        +   +      
Sbjct: 236 AESVRIVYGLAERINREVGGQQVDTIDIGGGLPVNFEGEEITPRFAAYAKLLRETVPGLF 295

Query: 226 --SVQIYLEPGEAIVTNTTTLNTTVLDISEN------IKNLVIVDSSVEAHVPDYLLYQE 277
                I  E G +++     +   V     +      + +     ++    VPD    + 
Sbjct: 296 DGRYTIVTEFGRSLLAKQGFVAALVEYTKTSGGRRIAVTHAGAQVATRTVFVPDSWPLRV 355

Query: 278 SATIYPNTGPYTAMVC----GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
           +A     T   +  +     G  C AGD+         +  GD I+  D   Y  +    
Sbjct: 356 AAFAPDGTLKESPDLVQDVAGPCCFAGDLVARARTLPELSPGDLIALWDTGAYYFSTHFA 415

Query: 334 FNGINMPTI-AVKNVDGTI----KAIREFSYNDYYN 364
           +N +  P +      D          R  S  +   
Sbjct: 416 YNSLPRPAVHGFWTDDEGRTRFATIRRGQSLAELLA 451


>gi|332995687|gb|AEF05742.1| Orn/DAP/Arg decarboxylase 2 [Alteromonas sp. SN2]
          Length = 407

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 59/378 (15%), Positives = 108/378 (28%), Gaps = 38/378 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+ D+  +   ++    +  N  V L  A+K      +   +   ++G   +S  E
Sbjct: 33  DSPCYIYDRHMISRTIEQVKRLLPNR-VHLHYAVKANPMSALVSHIASQVNGLDVASHKE 91

Query: 63  VMLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           +M+           +       D E+ A L+    I   + S+L +    A+++ KK  +
Sbjct: 92  LMIALSSGMPANKVSLAGPGKSDKELVAALTAGVVINVESESELARVSVHAKEIGKKANI 151

Query: 121 RINPSV-------SYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFL 173
            +  +               A P    S    K    I  E  +  G       +  S  
Sbjct: 152 ALRVNPAFHIRGAGMKMTGGAKPFGVDSEKVPKLIQSINREYCHFVGFHIFCGSQILSAE 211

Query: 174 CFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY---- 225
             S + +                 + I++GGG   T   +       R+      Y    
Sbjct: 212 LLSDVYQRTISLAVELSNAAKVIPKQINIGGGFGVTYFQHEKPLDIARVCSNLAIYIDKL 271

Query: 226 -----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-----------V 269
                  + +LE G  +V       T V+D   + +   +V      H           +
Sbjct: 272 PPAFTKTEFHLELGRYLVAQAGLYLTKVIDKKVSREKKFLVCDGGMHHHLANSGNFGQVI 331

Query: 270 PDYLLYQE-SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
                Y    A    +       + G  C   DI           +GD I+      Y  
Sbjct: 332 R--KNYPVLIANKVDSKFKEEVNIVGPLCTPLDIIATNINIPSANVGDHIAILMSGAYGA 389

Query: 329 NRKNW-FNGINMPTIAVK 345
                 F      T  + 
Sbjct: 390 TASPQSFLSREQVTELLL 407


>gi|190348193|gb|EDK40604.2| hypothetical protein PGUG_04702 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 432

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 50/377 (13%), Positives = 107/377 (28%), Gaps = 35/377 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++ N       ++   V+   A+KC     + + L +       +S  E+  
Sbjct: 59  FFVADIGAVVRNYRLWQ--QELPQVQPHYAVKCNTDMRVIEALARMGCNFDCASKTEIDQ 116

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                       Y    K             +    + V +L K K    +    I +  
Sbjct: 117 VLSLGVDPGRIVYANPCKTNSYVRHAKDVGVNLTTVDNVHELQKIKRFHPECGILIRIMT 176

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           +   +  +          + + E      +     V G+ FH              +++ 
Sbjct: 177 DDESAQCRLSTKFGCSVKTAVEELFP-LAKELNLRVRGVAFHVGSGATDLDSIYKAVQDS 235

Query: 183 EKEFGHFITQIEWISLG-GGIHFTDKDYPVKDFCQRLKEFSEK---------YSVQIYLE 232
              F   I Q  +  +    I    ++    +    ++   +K         + V+   E
Sbjct: 236 RILFDCGIDQFGFKEMNLLDIGGGFQESTFGESSAMVRMSLDKFFSSAYRELHPVEFIAE 295

Query: 233 PGEAIVTNTTTLNTTVLD----------ISENIKNLVIVDSSVEAHVPDYLLYQE----- 277
           PG  +V N  TL   V+           +   +     V  ++   + D+ +        
Sbjct: 296 PGRFMVANAFTLAVHVIARRDVREAESEVQAMLYVNDGVYGNLNCILFDHQVPSASLLTH 355

Query: 278 ---SATIYPNTGPYTAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                         +  + G +C   D   G+      V++GD + F ++  Y       
Sbjct: 356 KGQFVYGSEPDPELSFSIWGPTCDGLDCISGKCQLAFNVEVGDWLYFPNLGAYTSAATTS 415

Query: 334 FNGINMPTIAVKNVDGT 350
           FNG       V      
Sbjct: 416 FNGFKGTAEVVYVNSEK 432


>gi|152990247|ref|YP_001355969.1| diaminopimelate decarboxylase [Nitratiruptor sp. SB155-2]
 gi|151422108|dbj|BAF69612.1| diaminopimelate decarboxylase [Nitratiruptor sp. SB155-2]
          Length = 443

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 54/384 (14%), Positives = 119/384 (30%), Gaps = 32/384 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P ++  +  +             +   V+   + K      +    +         S 
Sbjct: 47  GSPLFVFSQNSIEEKYQEFKQAFTSRYPEVEFWWSYKTNYLDAICQIYHDLGSKAEVVSA 106

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKI 118
           +E          G+   +N  YK  E           I  +   ++N  +  A +L  +I
Sbjct: 107 FEYDKARRLGMPGKDIIFNGPYKPKEALKKAVQEGAKIHIDHWYEINDLESIADELGIEI 166

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
            + I  +++   +            GE   D IE   +     +   +    +F+  +  
Sbjct: 167 PVAIRCNMNTGIYPQWSRFGFNIDNGE-AYDAIERIYEGKKLYITGLHAHIGTFMLSAHA 225

Query: 179 LKNIEKEF--------GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS---- 226
                K+           F  ++E+I +GGG    ++   +    + +    ++Y+    
Sbjct: 226 YAEETKKLIQLKNRISADFGYEVEYIDIGGGFASKNRLKGIYQPPEVVVPSPDEYAEAVT 285

Query: 227 -----------VQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLL 274
                       +++LE G A++     L T+V             +  +    +     
Sbjct: 286 GAIFEYNEGNLPKLFLETGRALIDEAGYLLTSVFASKRLLDGKKSYIVDAGVNLLYTAFW 345

Query: 275 YQESATIYPNTG--PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
           Y     +          + + G  C+  D   E     P+  G  +S   V  YN+ +  
Sbjct: 346 YNFDIALDKRYEGLNEPSQINGPLCMNIDTIAENIMLPPLPRGSILSIWPVGAYNVTQSM 405

Query: 333 WFNGINMPTIAVKNVDGTIKAIRE 356
            F     P + + + +G+   IRE
Sbjct: 406 QFIQY-RPRVVLIDKEGSTHLIRE 428


>gi|21243907|ref|NP_643489.1| diaminopimelate decarboxylase [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|21109513|gb|AAM38025.1| diaminopimelate decarboxylase [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 398

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 52/373 (13%), Positives = 110/373 (29%), Gaps = 32/373 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            Y+ D   L  +    +  +  A  +L  A K  A   +  TL  ++DG  ++S  E+  
Sbjct: 27  AYVYDLAALDTH-AAWMRAQLPAQCELFYAAKANAEPPILRTLAPHVDGFEAASGGELAW 85

Query: 66  GHEKFGGETHAY-NVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
            H +       +      D E+    +  D  +   ++S+L +  + A    + + + + 
Sbjct: 86  LHAQQPQAPLLFGGPGKLDTELAQAAALPDCTVHVESLSELERLAEVASHAGRCVPVFLR 145

Query: 124 PS---VSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKSFL 173
            +          L    +P    G    D   +  +        + G  FH     +   
Sbjct: 146 MNIAVPGAQSTRLMMGGQPSP-FGLDPCDLHAAMQRLQASPSLRLAGFHFHLMSHQRDAT 204

Query: 174 CFSAMLKNI----EKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKY 225
               ++       ++    +      ++ GGG           +    FC  L     ++
Sbjct: 205 AQLHLVAAYLRTVQQWRQAYALGPLRVNAGGGFGVDYLAPEASFDWAGFCAGLPALLREH 264

Query: 226 SV--QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282
           +   ++ LEPG  +  +       VLD+  +      +      H         +     
Sbjct: 265 ATDLRLRLEPGRYVSASCGWYLMEVLDLKRSHGAWFAIARGGTHHFRTPAAQGHDHPFRV 324

Query: 283 PNTG------PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FN 335
                          + G+ C   D+         +  GD ++F     Y  N  +  F 
Sbjct: 325 LRGERAPVLRDTPVTLVGQLCTPKDVLARDQHVAALAPGDCLAFPLAGAYAWNISHQRFL 384

Query: 336 GINMPTIAVKNVD 348
               P +      
Sbjct: 385 MHPAPQMVFLTEG 397


>gi|254371951|ref|ZP_04987444.1| hypothetical protein FTCG_01087 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151569682|gb|EDN35336.1| hypothetical protein FTCG_01087 [Francisella novicida GA99-3549]
          Length = 403

 Score =  137 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 53/380 (13%), Positives = 107/380 (28%), Gaps = 33/380 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P++  D   L  +      +     VKL  ALK      +    ++       +S+ E+ 
Sbjct: 20  PFFYYDLDMLEAHAKELHRL----PVKLWYALKANPLSRIIKVFDEQKISFDVASIGELD 75

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKK--IG 119
                    +   +    K                +  +++QL       +K +    + 
Sbjct: 76  QVLAQGVNPKNILHTGPAKSYSQLEYFLAQGVRIFVIESINQLKDLSILVEKKNINVKVL 135

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLMFHNNCENKS 171
           LR+    +  +  +       +  G    D  +        S   ++ G+          
Sbjct: 136 LRVQLVWNDQENNVLGGGGCVTPFGLSINDWRDFFNSAPNISNNMSIIGMHCFQWGNILC 195

Query: 172 FLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               S + +   K            ++ I LGGGI               L     K   
Sbjct: 196 LNKLSQIWEITTKALLDLSEAINVSLKVIDLGGGIGVPYNAGQKSISINDLIFCFNKLKK 255

Query: 226 ---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-PDYLLYQESATI 281
               ++ +LE G   V  +    T ++D        ++V      H+    L  +     
Sbjct: 256 EFPYIEYWLELGRYAVAESGVYVTKIVDRKSVNNIDLLVTDGGAQHLVRPALTGESFPIQ 315

Query: 282 YPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNG 336
                  +      + G  C + D  G     K   + D + F+    Y        F  
Sbjct: 316 LLREEACSETNDFQIHGPLCTSLDKAGIASLPKDTGLNDYLIFKQTGAYGFTESMPLFLC 375

Query: 337 INMPTIAVKNVDGTIKAIRE 356
            N+P   +    G ++ +R+
Sbjct: 376 HNLPAEVIFYK-GQLQTVRQ 394


>gi|46562189|ref|YP_009103.1| Orn/DAP/Arg family decarboxylase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46447726|gb|AAS94392.1| Orn/DAP/Arg family decarboxylase [Desulfovibrio vulgaris str.
           Hildenborough]
          Length = 518

 Score =  136 bits (343), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 58/405 (14%), Positives = 105/405 (25%), Gaps = 49/405 (12%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  ++D++ L   +     +  +   G +L  + K     G+   L+    G  + S 
Sbjct: 35  GTPLLVVDEKALRAKVAEVRAVLDDELPGARLTYSYKTNCIPGILRVLHDAGVGAEAISA 94

Query: 61  YEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHK 116
           YE  L       GE   YN        +   +++   I  +   +++      +AQ    
Sbjct: 95  YEYWLAQSLGVPGEQLIYNGVDKSPESLAMAVAHGALINIDNRDEVDAVLATARAQGRVA 154

Query: 117 KIGLRINPSVSY-SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175
           +IGLR+  + S                     + K   E  ++  L F+     +     
Sbjct: 155 RIGLRLGLNRSAQFGLDPDSAEGDGDIAHVVARCKAHPEHASLEALHFNVTSNARHSGYH 214

Query: 176 SAMLKN----IEKEFGHFITQIEWISLGGGIH-------------------------FTD 206
              L      +          I  + +GGG                           + D
Sbjct: 215 VRCLALALDVMRTLARVHGVHIRLLDVGGGFGVQTSKNMSGVEYGLYRLFGVAPGGAWLD 274

Query: 207 KDYPV----KDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV 259
                    +D    L  +          + LEPG  + +    L T V  + E      
Sbjct: 275 PFQDFRLYIRDMAALLTSYCRDNALPQPVVCLEPGRLLTSGAELLLTRVKAVKERPGAEP 334

Query: 260 IVDSSVEAHVPDY-----LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKI 314
              +        Y           A            V GR C   D          +  
Sbjct: 335 FAITDGGRLSQAYPCDFEWHEAFLANDLRRPLARAYTVTGRVCTRSDWLYRGKVMPELAS 394

Query: 315 GDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD ++  D   Y  +    F       +               ++
Sbjct: 395 GDILAVLDAGAYFSSYAMNF-AFPRAAVVGVEDGRARVMRHRETF 438


>gi|325829969|ref|ZP_08163427.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein
           [Eggerthella sp. HGA1]
 gi|325488136|gb|EGC90573.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein
           [Eggerthella sp. HGA1]
          Length = 412

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 62/379 (16%), Positives = 121/379 (31%), Gaps = 34/379 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP YL D+Q L + +         + +KL  A+K      +    +   D   + S  E
Sbjct: 16  PTPLYLFDQQVLNDRITRLRASLP-SRIKLCYAMKANPF--IVREASALADCVEACSPGE 72

Query: 63  VML-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTI----IFNTVSQLNKFKDKAQKLHKK 117
           V++  +     E    +  +KD      L   D I       +  QL    + A    ++
Sbjct: 73  VLICANAGVPFEKIVLSGVWKDRRCLDDLFQADRIPHRFTIESSQQLKDLVELANAYRRR 132

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
           + +    S S ++F +          G K    I      + G+ +++  +  S      
Sbjct: 133 VNVLFRLS-SENQFGVDSATLKELIAGCKDDPFIS-----IQGIQYYSGTQKTSLKKLDR 186

Query: 178 MLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--------- 224
            L  + +           ++  I  G G+     D   +       E   +         
Sbjct: 187 ELSKLHRIVAEVEAACSVKLNEIEYGPGLPVEYFDENEERARSAQDEPVAELATLLDGFP 246

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
           +   I LE G +I  +     T+V+D+         +       +  Y       +    
Sbjct: 247 FEGDIVLELGRSIAADCGAYLTSVVDVKTTSGQNYAIVDGGMHQISYYGHSMAMKSPVFR 306

Query: 285 T------GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGI 337
                        +CG  C   DI  +      + +GD ++F     Y        F   
Sbjct: 307 KVGATAGAAQPWNICGALCTVNDIMAKQASIVDLSVGDVLAFSRAGAYCATEGRALFLSR 366

Query: 338 NMPTIAVKNVDGTIKAIRE 356
           ++P++ V++V G ++  R 
Sbjct: 367 DLPSVVVRDVSGNMRIARH 385


>gi|221120904|ref|XP_002160819.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 370

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 57/356 (16%), Positives = 111/356 (31%), Gaps = 27/356 (7%)

Query: 35  ALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNC 93
           A+KC     +   L         +S  E+    +     +   +    K        +  
Sbjct: 3   AIKCNPDPVVIALLAHLGVNFDCASKCEIKAVLDLGVDPDRIIFANPCKQASYIKYANEK 62

Query: 94  DTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES 153
           +       ++   +K K      ++ +RI    S S + L           +K     + 
Sbjct: 63  NVKKMTFDNEAELYKIKEHFPGAELVIRIKVDDSKSIYKLGRKFGASLESTQKLLHIAKD 122

Query: 154 EIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDYP 210
              NV G+ FH          F + +K+    F            + +GGG         
Sbjct: 123 LDLNVIGVSFHVGTGCYDASLFYSAVKSAAAVFNQGEILGYNFTLLDIGGGFPGVKNGKI 182

Query: 211 VKDFCQRL------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNL 258
             D           + F  + ++ I  EPG+  V +  TL   V  + +           
Sbjct: 183 SMDNIAAQLNLSIAEFFPPEMNLSIIAEPGKYFVESAFTLCCNVTSVRKVVDDKKTEFMY 242

Query: 259 VIVDSSVEAHVPDYLLYQESATIYPNTGPY---TAMVCGRSCLAGDIFGEFHFEKPVKIG 315
            + D    + +      +       ++  +    + V G +C + D   E  +   + IG
Sbjct: 243 YLNDGVYNSFLCVLFSEKFKPVPLNDSKTHLLFKSSVWGPTCDSCDCISEETYLPKLSIG 302

Query: 316 DRISFEDVAGYNINRKNWFNGINMPTIA------VKNV--DGTIKAIREFSYNDYY 363
           D + FE++  Y       FNG N P I       +     +G    ++  S+ D++
Sbjct: 303 DWLYFENMGAYATCLATKFNGFNPPIIYYACTDSIYKDLSNGKANLMQCRSFKDFF 358


>gi|311235443|gb|ADP88296.1| cyclic nucleotide-binding protein [Desulfovibrio vulgaris RCH1]
          Length = 541

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 58/405 (14%), Positives = 105/405 (25%), Gaps = 49/405 (12%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  ++D++ L   +     +  +   G +L  + K     G+   L+    G  + S 
Sbjct: 58  GTPLLVVDEKALRAKVAEVRAVLDDELPGARLTYSYKTNCIPGILRVLHDAGVGAEAISA 117

Query: 61  YEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKF--KDKAQKLHK 116
           YE  L       GE   YN        +   +++   I  +   +++      +AQ    
Sbjct: 118 YEYWLAQSLGVPGEQLIYNGVDKSPESLAMAVAHGALINIDNRDEVDAVLATARAQGRVA 177

Query: 117 KIGLRINPSVSY-SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175
           +IGLR+  + S                     + K   E  ++  L F+     +     
Sbjct: 178 RIGLRLGLNRSAQFGLDPDSAEGDGDIAHVVARCKAHPEHASLEALHFNVTSNARHSGYH 237

Query: 176 SAMLKN----IEKEFGHFITQIEWISLGGGIH-------------------------FTD 206
              L      +          I  + +GGG                           + D
Sbjct: 238 VRCLALALDVMRTLARVHGVHIRLLDVGGGFGVQTSKNMSGVEYGLYRLFGVAPGGAWLD 297

Query: 207 KDYPV----KDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV 259
                    +D    L  +          + LEPG  + +    L T V  + E      
Sbjct: 298 PFQDFRLYIRDMAALLTSYCRDNALPQPVVCLEPGRLLTSGAELLLTRVKAVKERPGAEP 357

Query: 260 IVDSSVEAHVPDY-----LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKI 314
              +        Y           A            V GR C   D          +  
Sbjct: 358 FAITDGGRLSQAYPCDFEWHEAFLANDLRRPLARAYTVTGRVCTRSDWLYRGKVMPELAS 417

Query: 315 GDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD ++  D   Y  +    F       +               ++
Sbjct: 418 GDILAVLDAGAYFSSYAMNF-AFPRAAVVGVEDGRARVMRHRETF 461


>gi|289774015|ref|ZP_06533393.1| decarboxylase [Streptomyces lividans TK24]
 gi|289704214|gb|EFD71643.1| decarboxylase [Streptomyces lividans TK24]
          Length = 457

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 56/386 (14%), Positives = 111/386 (28%), Gaps = 36/386 (9%)

Query: 4   TPYY-LIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           TP   L+D   +L  +D      +    V+   A K      +   L +   G   +S  
Sbjct: 35  TPLVGLLDVDGVLAAVDALNEAFEGPAPVQHTFAAKACGLVPVLRLLAEAGMGCEVASPG 94

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKA--QKLHKK 117
           E+       F  +   ++   K  E           I  +   ++ +       ++    
Sbjct: 95  ELEQALAAGFTYDRLVFDSPAKTVEELEFALAHGIAINLDNFQEMARVDGLLAGREAAGP 154

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDK--------IESEIKNVNGLMFHNNCE- 168
           IGLR+NP V              S+ G   +D+          +    +N L  H   + 
Sbjct: 155 IGLRVNPQVGAGAIGAMSTATATSKFGVALRDEGAVDAVIEAFARRPWLNRLHAHVGSQG 214

Query: 169 ---NKSFLCFSAMLKNIEKEFGHFIT-QIEWISLGGGIHFTDKDYPVKDFCQ-------R 217
                         +  E+        QI  + +GGG+         +            
Sbjct: 215 CPLPLIAQGVRTAYELAERINRELGRAQITGLDIGGGLPVNFDGEDDRPTYADHVAELRS 274

Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI------SENIKNLVIVDSSVEAHVPD 271
                      +  E G +++  + T+ + V            + +     ++    +PD
Sbjct: 275 AAPGLFDGRYALITEFGRSLLAKSGTIASVVEYTKSAGGRRIAVTHAGAQVATRTVFMPD 334

Query: 272 YLLYQE----SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
               +     +A            + G  C AGD+         V+ GD ++  D   Y 
Sbjct: 335 AWPLRVGVFDAAGRPKQGPAEVVDIAGPCCFAGDLTATGRELPAVEPGDVVALYDTGAYY 394

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKA 353
            +    +N +  P +     D   + 
Sbjct: 395 FSSHFSYNSLPRPAVYGYRTDSRGQI 420


>gi|21218863|ref|NP_624642.1| decarboxylase [Streptomyces coelicolor A3(2)]
 gi|256790137|ref|ZP_05528568.1| decarboxylase [Streptomyces lividans TK24]
 gi|5881872|emb|CAB55672.1| putative decarboxylase [Streptomyces coelicolor A3(2)]
          Length = 452

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 56/386 (14%), Positives = 111/386 (28%), Gaps = 36/386 (9%)

Query: 4   TPYY-LIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           TP   L+D   +L  +D      +    V+   A K      +   L +   G   +S  
Sbjct: 30  TPLVGLLDVDGVLAAVDALNEAFEGPAPVQHTFAAKACGLVPVLRLLAEAGMGCEVASPG 89

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKA--QKLHKK 117
           E+       F  +   ++   K  E           I  +   ++ +       ++    
Sbjct: 90  ELEQALAAGFTYDRLVFDSPAKTVEELEFALAHGIAINLDNFQEMARVDGLLAGREAAGP 149

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDK--------IESEIKNVNGLMFHNNCE- 168
           IGLR+NP V              S+ G   +D+          +    +N L  H   + 
Sbjct: 150 IGLRVNPQVGAGAIGAMSTATATSKFGVALRDEGAVDAVIEAFARRPWLNRLHAHVGSQG 209

Query: 169 ---NKSFLCFSAMLKNIEKEFGHFIT-QIEWISLGGGIHFTDKDYPVKDFCQ-------R 217
                         +  E+        QI  + +GGG+         +            
Sbjct: 210 CPLPLIAQGVRTAYELAERINRELGRAQITGLDIGGGLPVNFDGEDDRPTYADHVAELRS 269

Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI------SENIKNLVIVDSSVEAHVPD 271
                      +  E G +++  + T+ + V            + +     ++    +PD
Sbjct: 270 AAPGLFDGRYALITEFGRSLLAKSGTIASVVEYTKSAGGRRIAVTHAGAQVATRTVFMPD 329

Query: 272 YLLYQE----SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
               +     +A            + G  C AGD+         V+ GD ++  D   Y 
Sbjct: 330 AWPLRVGVFDAAGRPKQGPAEVVDIAGPCCFAGDLTATGRELPAVEPGDVVALYDTGAYY 389

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKA 353
            +    +N +  P +     D   + 
Sbjct: 390 FSSHFSYNSLPRPAVYGYRTDSRGQI 415


>gi|317476226|ref|ZP_07935477.1| carboxynorspermidine decarboxylase [Bacteroides eggerthii
           1_2_48FAA]
 gi|316907637|gb|EFV29340.1| carboxynorspermidine decarboxylase [Bacteroides eggerthii
           1_2_48FAA]
          Length = 255

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 58/200 (29%), Positives = 107/200 (53%), Gaps = 3/200 (1%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+++++ L  NL+    +   AGV+++LA K FA W  F    +Y++ +T+SS+YE
Sbjct: 10  PSPCYIMEEELLRKNLELIKSVADRAGVEIILAFKSFAMWRSFPIFREYVEHSTASSVYE 69

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGL 120
             L  E+FG + H Y+ AY +     ++     I FN+++Q  +F     A       G+
Sbjct: 70  ARLALEEFGSKAHTYSPAYTEAGFPEIMRCSSHITFNSLAQFRRFYPMIQADGQGISCGI 129

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+NP  S  +  L +P  P +R G   +   +   + ++G   H +CE+ S+      L+
Sbjct: 130 RVNPEYSEVETELYNPCAPGTRFGVMAEQLSDVLPQGIDGFHCHCHCESSSYE-LERTLE 188

Query: 181 NIEKEFGHFITQIEWISLGG 200
           ++E +F  +  Q++W++LGG
Sbjct: 189 HLEAKFSRWFPQLKWLNLGG 208


>gi|330952171|gb|EGH52431.1| diaminopimelate decarboxylase [Pseudomonas syringae Cit 7]
          Length = 279

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 72/237 (30%), Gaps = 15/237 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +                 +  A+K  +  G+   L +   G    S  E
Sbjct: 26  GTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVKANSNLGVLSVLARLGAGFDIVSRGE 85

Query: 63  VMLGH-EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH--KK 117
           +          E   ++     ++    A+          +  +L + +  A +L+    
Sbjct: 86  LERVLAAGGKAEKIVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQGVAAELNVRAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENK 170
           I LR+NP V              ++ G       +  I+        V G+  H   +  
Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKFGIAIAAAEDVYIRASQLPNLEVIGVDCHIGSQLT 205

Query: 171 SFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
           +   F   L    ++    G     +  I LGGG+    +D         +K   E+
Sbjct: 206 TLEPFIDALDRLLDLVDRLGDCGIHLHHIDLGGGLGVRYRDEEPPLAADYIKAVRER 262


>gi|289672833|ref|ZP_06493723.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. syringae
           FF5]
          Length = 205

 Score =  136 bits (342), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 61/187 (32%), Gaps = 8/187 (4%)

Query: 185 EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ---IYLEPGEAIVTNT 241
             G     +  I LGGG+    +D         +K   E+ + +   +  EPG  IV N 
Sbjct: 13  RLGDCGIHLHHIDLGGGLGVRYRDEEPPLAADYIKAVRERLAGRDLGLLFEPGRFIVANA 72

Query: 242 TTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---ATIYPNTGPYTAMVCGRSC 297
             L T V  +         IVD+++   +   L        A    ++ P    + G  C
Sbjct: 73  GALLTRVEYLKHTEHKDFAIVDAAMNDLIRPALYQAWMDVTAVRPRDSEPRAYDIVGPIC 132

Query: 298 LAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF 357
             GD   +      +  GD ++      Y     + +N        + +     +  R  
Sbjct: 133 ETGDFLAKGRELA-LAEGDLLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGSQAFEVRRRE 191

Query: 358 SYNDYYN 364
           +  + + 
Sbjct: 192 TVAELFA 198


>gi|126699417|ref|YP_001088314.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile
           630]
 gi|115250854|emb|CAJ68678.1| Pyridoxal-dependent decarboxylase, group IV decarboxylase family
           [Clostridium difficile]
          Length = 403

 Score =  136 bits (342), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 62/394 (15%), Positives = 129/394 (32%), Gaps = 51/394 (12%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y+ D+  ++             G   L ++K      +  ++ +   G  +SS  EVM
Sbjct: 15  PCYIYDETNIIEKCKELKN--NILGFDFLYSIKTNPYNKIVKSIAEQGFGADASSTNEVM 72

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +  +     +   Y+   K       + +   II ++++++      ++K ++K+ + I 
Sbjct: 73  ISSKCGVSKDDIYYSSPGKTEIDIETVLDKCIIIADSITEIELINKISKKHNQKVKIGIR 132

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENKSFLCFS 176
            +     F + D +   S+ G   +D           +  +V G+  H   +   F    
Sbjct: 133 INPD---FTMDDDSAKSSKFGIDIEDMSSVFKMLSMCDYVSVVGIHIHIKSQVLDFEKLG 189

Query: 177 AMLKNIEKEF----GHFITQIEWISLGGGIHFTDKD--YPVKDFCQRLKEFSE------- 223
              +                IE+I+ G G+     +      +  +  K   +       
Sbjct: 190 HYYEKCFFIALNLNKSKYINIEFINFGSGLGVAYDNLRENPLNLKELSKLTQKIAFTNSN 249

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPD----------- 271
               ++ +E G  IV  +      ++DI  +  K  +IV + +   +             
Sbjct: 250 TLKSRLLIESGRFIVCKSGNYYVKIVDIKVSRGKKYLIVKNGLNGFMRPIISNLIENITC 309

Query: 272 -----------YLLYQESATIYPNTGPYTA-MVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319
                         +  S ++  N        V G  C + D+       K   IGD IS
Sbjct: 310 GVELEGQEPLYTSNHAFSLSVLNNLKEEEYVNVVGNLCTSLDVIANNVKLKKANIGDLIS 369

Query: 320 FEDVAGYNINRKN-WFNGINMPTIAVKNVDGTIK 352
             +   Y+ +     F+    P    K  DG I+
Sbjct: 370 ISNAGSYSYSLSPLLFSSYEFPKQYYKRKDGYIE 403


>gi|70986558|ref|XP_748770.1| ornithine decarboxylase [Aspergillus fumigatus Af293]
 gi|66846400|gb|EAL86732.1| ornithine decarboxylase, putative [Aspergillus fumigatus Af293]
          Length = 443

 Score =  136 bits (342), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 56/368 (15%), Positives = 106/368 (28%), Gaps = 40/368 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ +   +L+ L+      +   V+   A+KC     +   L++   G   +S  E+  
Sbjct: 37  FFVGNLDSVLDRLEEWRR--ELPFVQPFYAVKCNDNKTLLTLLSRAGTGFDCASKKEMQQ 94

Query: 66  GHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
             +     E   +      +D    A     D I+ ++  +L K  +        I LR+
Sbjct: 95  ILQLGVNPERIIFAAPRKAEDYINYAHEHGIDKIVVDSEDELRKLAEIV--PSAMIFLRL 152

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
                 S+  L++                      V G+ FH          +   +   
Sbjct: 153 RADDPTSRVRLSEKFGSDLLEARGILQVAVDLSVKVTGICFHVGSAALDPGAYVRAIAMA 212

Query: 183 EKEFGHF-----ITQIEWISLGGGI-HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
            + + +         I  I +GGG      +             F  +  +Q   EPG  
Sbjct: 213 REVYDYNETLSSKHPILIIDIGGGFTESNFRLLAPAVRSAADMYFGGETGIQWVAEPGRF 272

Query: 237 IVTNTTTLNTTVLD-----ISENIKNLVIVDSSVEAHVPDYLL----------------- 274
           IV+    L   VL      +              E  V D +                  
Sbjct: 273 IVSEAFYLVCRVLGTRKRLVEYVDGPNQNHYFHAELFVNDGIYQNFLNALVEGYIPTPVP 332

Query: 275 ----YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNIN 329
                +           Y+  V G++C   D        +  ++ GD + F  +  Y   
Sbjct: 333 LDPSGRPYGLPEREDKSYSYTVWGQTCCGADKIKSNCRLRCEMQAGDLLCFPSMGAYTHV 392

Query: 330 RKNWFNGI 337
             + FNG 
Sbjct: 393 TASGFNGF 400


>gi|282862736|ref|ZP_06271797.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces sp. ACTE]
 gi|282562422|gb|EFB67963.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces sp. ACTE]
          Length = 469

 Score =  136 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 57/371 (15%), Positives = 116/371 (31%), Gaps = 36/371 (9%)

Query: 9   IDKQKLLNNLDTALYIRKN-AGVKLL--LALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +D Q + +++       +   GV +L   A K  +   +   L     G   +S  E+ L
Sbjct: 44  LDAQGVRHSVAALRDAFEAVPGVSVLHTFAAKAASLVPVLRLLAACGMGCEVASPGELRL 103

Query: 66  GHE-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-AQKLHKKIGLRI 122
             E  F  ET    + A    E+   L+    +  ++  +L +  +  + +    +GLRI
Sbjct: 104 AVEAGFAPETIVLDSPAKTLDELRLALALGVAVNADSFDELRRIGELRSPESASVLGLRI 163

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFHNNCENKSFLC 174
           NP V              S+ G   +D        +  +E   +  L  H   +      
Sbjct: 164 NPQVGGGSIGAMSTATAASKFGVPLRDPGVREQVVRSFAERPWLTRLHAHVGSQGCPLEL 223

Query: 175 FSAMLKNIEKEFGHFI-----TQIEWISLGGGIHFTDKDY-------PVKDFCQRLKEFS 222
            +  +    +            +I  I +GGG+     D           +  +      
Sbjct: 224 IAEGVAETYRLAEEINEAVGARRITGIDIGGGLPVNFADEEDRPAFSDYVNVLRAAAPGL 283

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI------KNLVIVDSSVEAHVPDYLLYQ 276
            +    +  E G +++     +   V    +         +     ++    +PD    +
Sbjct: 284 FEGRYGLVTEFGRSLLAKNGFIGARVEYTKDAGGRRIALTHAGAQVATRTVFMPDAWPLR 343

Query: 277 ESAT----IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
             A           P    + G  C AGD+         ++ GD ++  D   Y  +   
Sbjct: 344 IGAFDGQGRPRGGPPMVQDIAGPCCFAGDVVAHARELPELREGDFVALYDTGAYYFSTPW 403

Query: 333 WFNGINMPTIA 343
            +N +  P + 
Sbjct: 404 AYNSLPRPAVY 414


>gi|255077437|ref|XP_002502359.1| adenosylmethionine/pyridoxal dependant decarboxylase fusion protein
            [Micromonas sp. RCC299]
 gi|226517624|gb|ACO63617.1| adenosylmethionine/pyridoxal dependant decarboxylase fusion protein
            [Micromonas sp. RCC299]
          Length = 1039

 Score =  136 bits (341), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 67/415 (16%), Positives = 120/415 (28%), Gaps = 70/415 (16%)

Query: 8    LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67
            ++D   ++                   A+KC    G+   L         +S  EV +  
Sbjct: 629  VVDLGVVMRRWRYWRATIPR--AMPHYAVKCNPDTGVLAILAALGSSFDCASATEVDMVM 686

Query: 68   E-KFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                  +   Y    K     A           F++V++L+K  + A ++   + LR + 
Sbjct: 687  ALGVTPDRIIYANPCKMPAHLARVRDCGVGLTTFDSVAELHKIYELAPEMKVVLRLRADD 746

Query: 125  SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
              +    +L +         E      +    +V G+ FH      +   F   L+    
Sbjct: 747  PDARC--VLGNKFGAEPPEIEPLLTAAKHLGIHVEGVAFHVGSGATNPRAFRVALERARL 804

Query: 185  EF----GHFITQIEWISLGGGIHFTDKDYPVKD-------------FCQRLKEFSEKYSV 227
             F       +  ++ + +GGG   + +     +                  + F E   V
Sbjct: 805  AFDIAERVGLPPLKLVDIGGGFSGSVRTVAATNDSDVTLTEVAKTVNAALEEFFPESSGV 864

Query: 228  QIYLEPGEAIVTNTTTLNTTVL-------------------------DISENIKNLVIVD 262
            +I  EPG      TTTL T V                           +   +  L+   
Sbjct: 865  RIISEPGRYFAEATTTLATMVFSRRIRSEEDGSVAKGGDTHQYFVSDGLYGMMNCLLYDH 924

Query: 263  SSVEAHVPDYLLYQE-----------------SATIYPNTGPYTAMVCGRSCLAGDIFGE 305
            +S+ A +                         +         Y + V G +C   D   E
Sbjct: 925  ASITARILPVSTNAAALAGGDLNGIVPRGVYSNEEDTNGLTKYPSTVFGPTCDGIDKVLE 984

Query: 306  FHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI----AVKNVDGTIKAIRE 356
                  V IGD + F  +  Y ++  + FNG +   +        VDG    IR 
Sbjct: 985  NTLLPEVSIGDWLLFPHMGAYTVSAGSNFNGFDCAGVRKYYVASIVDGDPDEIRR 1039


>gi|163840434|ref|YP_001624839.1| diaminopimelate decarboxylase [Renibacterium salmoninarum ATCC
           33209]
 gi|162953910|gb|ABY23425.1| diaminopimelate decarboxylase [Renibacterium salmoninarum ATCC
           33209]
          Length = 419

 Score =  136 bits (341), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 54/383 (14%), Positives = 111/383 (28%), Gaps = 42/383 (10%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA-----GVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           P Y+ D   L ++L        +      GV++L A+K      +  T  + +DG   SS
Sbjct: 33  PAYVYDLAHLRSHLVAIKAALSHPASGGSGVEILYAVKANPDAEVVRTAAEILDGLEVSS 92

Query: 60  LYEVMLGHEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             E+             +    K       A+ +        +V +L +    A +    
Sbjct: 93  GGEITHVRALLPDARLIFGGPGKTDAELSTALAAGVHRFHVESVDELRRLNALAAEAGIT 152

Query: 118 IGLRINPSVSYSKFILA------DPNRPFSRLGEKCKDKIESEIKN-------VNGLMFH 164
             +    ++                    S  G   ++   +  +        ++G+  H
Sbjct: 153 AEILFRVNIQAGITSGNSSTAALTMGGVPSPFGMDPEEAALAAAQLETMPNITLHGVHAH 212

Query: 165 NNCEN---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQR 217
                           + +           ++  +++GGG+        + +   D+  R
Sbjct: 213 LASGVDSATGAAEAEDIARWARSFAAEHGLELSELNVGGGMSVDYLRTAEPFDWSDYGSR 272

Query: 218 LKEFSEKYSVQIY-LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLY 275
           L   +EKY    + +EPG AI   +    + V ++  +      V S    H+       
Sbjct: 273 LNSLAEKYPEFTFQIEPGRAISAYSGWYLSRVQELKRSHGKWFAVCSGGTHHLRTPAAKG 332

Query: 276 Q------------ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323
                        +      +    +    G+ C   D+         +  GD + F   
Sbjct: 333 HSQPLSVLQVAEWDRPWERASLQENSVSFVGQLCTPKDLLARDVPVSQISAGDTVIFGLA 392

Query: 324 AGYNINRKNW-FNGINMPTIAVK 345
             Y +N  +  F     P I   
Sbjct: 393 GAYALNISHRDFLMHPQPEILHV 415


>gi|254975445|ref|ZP_05271917.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile
           QCD-66c26]
 gi|255092832|ref|ZP_05322310.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile
           CIP 107932]
 gi|255314575|ref|ZP_05356158.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile
           QCD-76w55]
 gi|255517249|ref|ZP_05384925.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile
           QCD-97b34]
 gi|255650355|ref|ZP_05397257.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile
           QCD-37x79]
 gi|306520316|ref|ZP_07406663.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile
           QCD-32g58]
          Length = 403

 Score =  136 bits (341), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 63/394 (15%), Positives = 127/394 (32%), Gaps = 51/394 (12%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y+ D+  ++             G   L ++K      +  ++ +   G  +SS  EVM
Sbjct: 15  PCYIYDETNIIEKCKELKN--NILGFDFLYSIKTNPYNKIVKSIAEQGFGADASSTNEVM 72

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +  E         Y+   K       + +   II ++++++      ++K ++K+ + I 
Sbjct: 73  ISSECGVSKYDIYYSSPGKTEIDIETVLDKCIIIADSITEIELINKISKKHNQKVKIGIR 132

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENKSFLCFS 176
            +     F + D +   S+ G   +D           +  +V G+  H   +   F    
Sbjct: 133 INPD---FTMDDDSAKSSKFGIDIEDMSSVFKMLSMCDYVSVVGIHIHIKSQVLDFEKLG 189

Query: 177 AMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFC---------QRLKEFSE 223
              +                IE+I+ G G+     +                + +   S 
Sbjct: 190 HYYEKCFFIALNLNKSKYINIEFINFGSGLGVAYDNLRENPLNLKELSKLTQKIVFTNSN 249

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPD----------- 271
               ++ +E G  IV  +      ++DI  +  K  +IV + +   +             
Sbjct: 250 TLKSRLLIESGRFIVCKSGNYYVKIVDIKVSRGKKYLIVKNGLNGFMRPIISNLIENITC 309

Query: 272 -----------YLLYQESATIYPNTGPYTA-MVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319
                         +  S ++  N        V G  C + D+       K   IGD IS
Sbjct: 310 GVELEGQEPLYTSNHAFSLSVLNNLKEEEYVNVVGNLCTSLDVIANNVKLKKANIGDLIS 369

Query: 320 FEDVAGYNINRKN-WFNGINMPTIAVKNVDGTIK 352
             +   Y+ +     F+    P    K  DG I+
Sbjct: 370 ISNAGSYSYSLSPLLFSSYEFPKQYYKRKDGYIE 403


>gi|156550618|ref|XP_001604448.1| PREDICTED: similar to ENSANGP00000020224 [Nasonia vitripennis]
          Length = 423

 Score =  136 bits (341), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 55/372 (14%), Positives = 118/372 (31%), Gaps = 37/372 (9%)

Query: 23  YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVA- 80
           +I+K   V    A+KC     +   L         +S  E++   + +   +   +    
Sbjct: 50  WIQKIPRVVPYYAVKCNPNPTIIKVLAALGGHFDCASKGEIVQVMQYEVPSDKIIFANPI 109

Query: 81  -YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRP 139
            +      A     DT+  ++  +L K +         I +R + +V  ++      ++ 
Sbjct: 110 KFPSHLEYARKVGVDTMTADSEEELKKIRKLYPDAKVVIRIRCDSTVKTARTH-CLDDKF 168

Query: 140 FSRLGEKCKDKIE---SEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG----HFITQ 192
                      I+        ++G  FH     +  +     +   +             
Sbjct: 169 GCDHSSDAVQLIKMTLDLGLQLHGFSFHAGSPCEDAVAICRGIYRCKDLIDTAKTMGCRD 228

Query: 193 IEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--YSVQIYLEPGEAIVTNTTTLNTTVLD 250
           ++ I +GGG       + + +    +    E    SV+I  EPG  IV +       V+ 
Sbjct: 229 VKLIDIGGGFPGERD-FILDEVTNMVNNALEDIDSSVEIISEPGRFIVASACNSAAYVIG 287

Query: 251 ISENIKNLVIVDSS--------------VEAHVPDYLLYQESATIYPNTGPYTAMVCGRS 296
               +K                         +     +     +   +   Y + V G +
Sbjct: 288 KKTVMKENQKTFMYYITDGVYGSFNEELCTNNYFRSPVSSFRNSTSTDDEKYPSSVWGPT 347

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           C + D+  +        +GD + + D+  Y+ +  N FNG+ +P +           +R 
Sbjct: 348 CDSFDVVLKNSMLPEFNVGDWLVWADIGAYSTSCANEFNGLQIPKV--------HPIMRR 399

Query: 357 FSYNDYYNN-LS 367
             + D+  N LS
Sbjct: 400 KDWLDFLLNYLS 411


>gi|254579054|ref|XP_002495513.1| ZYRO0B13112p [Zygosaccharomyces rouxii]
 gi|238938403|emb|CAR26580.1| ZYRO0B13112p [Zygosaccharomyces rouxii]
          Length = 443

 Score =  136 bits (341), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 55/367 (14%), Positives = 104/367 (28%), Gaps = 40/367 (10%)

Query: 6   YYLID---KQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +++ D     +L  N     + R+   V+   A+KC     +   L         +S  E
Sbjct: 68  FFVCDIGEVGRLHKN-----WFRELPRVQPYYAVKCNPDAKVLRKLADLGVNFDCASKSE 122

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +          E   Y    K        +    +     +     K K      ++ LR
Sbjct: 123 IEKVLAMGVNPERIIYANPCKASSFIRYAAGAKVLKSTFDNVEELHKIKKYHPDSQLLLR 182

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           I    S ++  L+          +     ++    N+ G+ FH       F      +K+
Sbjct: 183 IATDDSTAQCRLSTKYGCEMEKVDTLLQCVKDLGLNLVGVSFHVGSGASDFTSLYTAVKD 242

Query: 182 IEKEFGH----FITQIEWISLGGGIHFTDKDYPVKD-FCQRLKEFSEKYSVQIYLEPGEA 236
               F       ++ ++ + +GGG                  + F +   + I  EPG  
Sbjct: 243 SRTVFDRAQDFGLSNLKLLDVGGGFQLESFHDSSAVLRSALDEFFPQGCGIDIIAEPGRY 302

Query: 237 IVTNTTTLNTTVLD----------ISENIKNLVIVDSSVEAHVPDY----------LLYQ 276
               T TL   V+           +  N      ++  +  H                Y 
Sbjct: 303 FAATTFTLAANVIAKRKLSSNESMLYINDGVYGNMNCILFDHQEPTPRTLYHNGEFYYYD 362

Query: 277 -----ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFE-KPVKIGDRISFEDVAGYNINR 330
                  +       P    + G +C   D   + ++    +  GD I F  +  Y  + 
Sbjct: 363 FNSTSPRSFQKGFQYPQKVSIWGPTCDGLDCITKEYYIKHDLVPGDWIFFPSLGAYAASA 422

Query: 331 KNWFNGI 337
              FNG 
Sbjct: 423 ATPFNGF 429


>gi|290999347|ref|XP_002682241.1| predicted protein [Naegleria gruberi]
 gi|284095868|gb|EFC49497.1| predicted protein [Naegleria gruberi]
          Length = 430

 Score =  136 bits (341), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 59/386 (15%), Positives = 105/386 (27%), Gaps = 44/386 (11%)

Query: 2   IKT---PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
           + T   P+Y++D  ++L  + T     +   V    A+KC         L +   G   +
Sbjct: 42  LPTIEEPFYVVDLSEVLGQVKTWRE--ELPRVTPFYAIKCNPNPQFLSVLEKLGCGFDVA 99

Query: 59  SLYEVMLGHEKFG-----GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
           S  E+                  Y                        +    +K K   
Sbjct: 100 SRDEIERVKHVITNNDELANRCIYANPCHPISHLRYARTSGVQYTTADNIDELYKLKKYW 159

Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK--- 170
              +I +RI    S+S    +        +  +  D I+    N+ G+ FH         
Sbjct: 160 PEAQIVIRIKTDDSHSLCQFSTKFGAELSVAFEMVDIIKDLGLNLAGVSFHVGSGCNDVN 219

Query: 171 -SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEKYS 226
                        +  F     ++  + LGGG     + +         + +K   ++  
Sbjct: 220 SFIKAIRDARAVFDYGFKVLNKKLWLLDLGGGWQGRSQKHGNAAFISVARTIKPLLDELF 279

Query: 227 V-----QIYLEPGEAIVTNTTT----------LNTTVLDISENIKNLVIVDSSVEAHVPD 271
                 QI  EPG  I  +T T            + VL                +   P+
Sbjct: 280 PVESGTQIIAEPGRYIAHSTHTLITSIFSRRIEKSRVLYYIYEGVYHSFNCLIFDHAEPE 339

Query: 272 YLLYQESATIYPNTGPY----------TAMVCGRSCLAGDIFGEFH--FEKPVKIGDRIS 319
                    I  N                 + G +C + D+  +        ++ GD I 
Sbjct: 340 LKFLSYEELISDNVTDEVENRVGHSDKAVTLYGSTCDSMDVIIKDSHQLPNCLECGDVIF 399

Query: 320 FEDVAGYNINRKNWFNGINMPTIAVK 345
            E+   Y  +    FNG     I   
Sbjct: 400 VEEFGAYTNSASTEFNGFKSAKIYYI 425


>gi|260683468|ref|YP_003214753.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile
           CD196]
 gi|260687064|ref|YP_003218197.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile
           R20291]
 gi|260209631|emb|CBA63307.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile
           CD196]
 gi|260213080|emb|CBE04462.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile
           R20291]
          Length = 414

 Score =  135 bits (340), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 63/394 (15%), Positives = 127/394 (32%), Gaps = 51/394 (12%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y+ D+  ++             G   L ++K      +  ++ +   G  +SS  EVM
Sbjct: 26  PCYIYDETNIIEKCKELKN--NILGFDFLYSIKTNPYNKIVKSIAEQGFGADASSTNEVM 83

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +  E         Y+   K       + +   II ++++++      ++K ++K+ + I 
Sbjct: 84  ISSECGVSKYDIYYSSPGKTEIDIETVLDKCIIIADSITEIELINKISKKHNQKVKIGIR 143

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENKSFLCFS 176
            +     F + D +   S+ G   +D           +  +V G+  H   +   F    
Sbjct: 144 INPD---FTMDDDSAKSSKFGIDIEDMSSVFKMLSMCDYVSVVGIHIHIKSQVLDFEKLG 200

Query: 177 AMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFC---------QRLKEFSE 223
              +                IE+I+ G G+     +                + +   S 
Sbjct: 201 HYYEKCFFIALNLNKSKYINIEFINFGSGLGVAYDNLRENPLNLKELSKLTQKIVFTNSN 260

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPD----------- 271
               ++ +E G  IV  +      ++DI  +  K  +IV + +   +             
Sbjct: 261 TLKSRLLIESGRFIVCKSGNYYVKIVDIKVSRGKKYLIVKNGLNGFMRPIISNLIENITC 320

Query: 272 -----------YLLYQESATIYPNTGPYTA-MVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319
                         +  S ++  N        V G  C + D+       K   IGD IS
Sbjct: 321 GVELEGQEPLYTSNHAFSLSVLNNLKEEEYVNVVGNLCTSLDVIANNVKLKKANIGDLIS 380

Query: 320 FEDVAGYNINRKN-WFNGINMPTIAVKNVDGTIK 352
             +   Y+ +     F+    P    K  DG I+
Sbjct: 381 ISNAGSYSYSLSPLLFSSYEFPKQYYKRKDGYIE 414


>gi|254488014|ref|ZP_05101219.1| decarboxylase, pyridoxal-dependent [Roseobacter sp. GAI101]
 gi|214044883|gb|EEB85521.1| decarboxylase, pyridoxal-dependent [Roseobacter sp. GAI101]
          Length = 390

 Score =  135 bits (340), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 56/354 (15%), Positives = 120/354 (33%), Gaps = 22/354 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++ ++++    D            +  A+K   A  +   L +   G  ++S  E+ 
Sbjct: 32  PTLVVSRERVGIQYDAL--SAGLGNAHIHYAVKANPAPEIIRLLVERGSGFDAASRQEIE 89

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           L   +    ++ ++    K     A   +    +F    +    K        ++ +R+ 
Sbjct: 90  LCLSQGADPKSISFGNTIKRGVDIAFAHSIGVTLFAADCESELDKIATHAPGARVYIRLI 149

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI- 182
              S + + L         L     D  +S      GL FH   + +    ++ +L  + 
Sbjct: 150 VENSLADWPLTRKFGCADTLLPTLLDYAKSVGLVPYGLSFHVGSQTRKAEYWNPVLDQVA 209

Query: 183 --EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEKYSVQIYL--EPGE 235
                       ++ +++GGG      D    P       +    E++    Y+  EPG 
Sbjct: 210 PLWHAAKAAGHDLQLLNIGGGFPAYHGDVVDAPRGYAAAVMAAVKERFGEIAYIMAEPGR 269

Query: 236 AIVTNTTTLNTTVLDISEN----IKNLVIVDSSVEAHVPDY--LLYQESATIYPNTGPY- 288
            +V     +   VL +S       +  V +D    + + +      +       + GP  
Sbjct: 270 GMVAEAGHIAAEVLLVSRKSAVAERRWVYLDIGRFSGLAETEGEAIRYEFITAHDGGPVG 329

Query: 289 TAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338
             ++ G SC + DI  E +       ++ GD+I  ++   Y  +  +  FNG  
Sbjct: 330 PCVMAGPSCDSADILYERNPVDLPLALRDGDKIMIKNCGAYTSSYSSVGFNGFP 383


>gi|313623109|gb|EFR93382.1| diaminopimelate decarboxylase [Listeria innocua FSL J1-023]
          Length = 325

 Score =  135 bits (340), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 40/316 (12%), Positives = 97/316 (30%), Gaps = 34/316 (10%)

Query: 86  IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--IGLRINPSVSYSKFILADPNRPFSRL 143
             A+       + +   +++  +D   + ++K  + +R+ P +           +  S+ 
Sbjct: 9   HMALDYGIGCFVIDNYYEISLLEDILIERNEKAAVLIRVTPGIEAHTHDYILTGQDDSKF 68

Query: 144 GEKCKD----------KIESEIKNVNGLMFHNNCENKSFLCF----SAMLKNIEKEFGHF 189
           G    +             S   ++ GL  H   +      F      ++  + +  G  
Sbjct: 69  GFGLTNGQAEKAIKQVLHASASFDLIGLHCHIGSQIFETTGFKLAARRIMDKLVEWHGTL 128

Query: 190 ITQIEWISLGGGIHFTDKDYPVK-DFCQRLKEFSEKYS----------VQIYLEPGEAIV 238
               + ++LGGG            +  + +++  ++             +I++EPG ++V
Sbjct: 129 GFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQIMDEVRDVANSNDIAIPEIWIEPGRSLV 188

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLYQESATIYPNT----GPYTAMV 292
               T    V    E       +     +  ++   L       +           T  +
Sbjct: 189 GEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDNIRPALYDAHYDAVLAANPEKVAEETVAI 248

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352
            G+ C +GD+            G+ ++      Y     + +N I  P +          
Sbjct: 249 AGKCCESGDMLIWDLPLPKSDAGEILAVFCTGAYGYAMASNYNRIPRPPVVFVENGMDKL 308

Query: 353 AIREFSYNDYYNN-LS 367
            +   +Y +   N LS
Sbjct: 309 IVARETYENLVQNDLS 324


>gi|255100982|ref|ZP_05329959.1| putative pyridoxal-dependent decarboxylase [Clostridium difficile
           QCD-63q42]
          Length = 403

 Score =  135 bits (340), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 62/394 (15%), Positives = 129/394 (32%), Gaps = 51/394 (12%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y+ D+  ++             G   L ++K      +  ++ +   G  +SS  EVM
Sbjct: 15  PCYIYDETNIIEKCKELKN--NILGFDFLYSIKTNPYNKIVKSIAEQGFGADASSTNEVM 72

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +  +     +   Y+   K       + +   II ++++++      ++K ++K+ + I 
Sbjct: 73  ISSKCGVSKDDIYYSSPGKTEIDIETVLDKCIIIADSITEIELINKISKKHNQKVKIGIR 132

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENKSFLCFS 176
            +     F + D +   S+ G   +D           +  +V G+  H   +   F    
Sbjct: 133 INPD---FTMDDDSAKSSKFGIDIEDMSSVFKMLSMCDYVSVVGIHIHIKSQVLDFEKLG 189

Query: 177 AMLKNIEKEF----GHFITQIEWISLGGGIHFTDKD--YPVKDFCQRLKEFSE------- 223
              +                IE+I+ G G+     +      +  +  K   +       
Sbjct: 190 HYYEKCFFIALNLNKSKYINIEFINFGSGLGVAYDNLRENPLNLKELSKLTQKIAFTNSN 249

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPD----------- 271
               ++ +E G  IV  +      ++DI  +  K  +IV + +   +             
Sbjct: 250 TLKSRLLIESGRFIVCKSGNYYVKIVDIKVSRGKKYLIVKNGLNGFMRPIISNLIENITC 309

Query: 272 -----------YLLYQESATIYPNTGPYTA-MVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319
                         +  S ++  N        V G  C + D+       K   IGD IS
Sbjct: 310 GVELEGQEPLYTSNHAFSLSVLNNLKEEEYVNVVGNLCTSLDVIANNIKLKKANIGDLIS 369

Query: 320 FEDVAGYNINRKN-WFNGINMPTIAVKNVDGTIK 352
             +   Y+ +     F+    P    K  DG I+
Sbjct: 370 ISNAGSYSYSLSPLLFSSYEFPKQYYKRKDGYIE 403


>gi|291527362|emb|CBK92948.1| Diaminopimelate decarboxylase [Eubacterium rectale M104/1]
          Length = 400

 Score =  135 bits (340), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 50/392 (12%), Positives = 114/392 (29%), Gaps = 42/392 (10%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVK---LLLALKCFAAWGMFDTLNQYMDGTTS 57
           M +TPYY+ D  +               G +   L  ++K      +   L + +D    
Sbjct: 1   MRQTPYYVFDTDEFAKRAAMIRAALDCKGGRRIPLCFSIKANPF--LLHRLPEGLDHVEV 58

Query: 58  SSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL 114
            S  E+ +        E+  Y+   K+              +   ++       +     
Sbjct: 59  CSPGELEICIALGVKPESIIYSGVMKEKCDIERAVSYGAGILTCESIRHAALISEV-MLE 117

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNC 167
               G            ++       ++ G    D               V G+ +++  
Sbjct: 118 RMPEGAHEAEFAETKTHVILRLTS-GNQFGMSLDDIEYIISHPDEFKGIAVMGIHYYSGT 176

Query: 168 E---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF--------CQ 216
           +    K       +   +      +  + + +  G G+     +   ++          +
Sbjct: 177 QKSLRKINKDLEKIKSALSVLKEKYSFEPQLVEYGPGLCVEYFEDDWQEREKRSLDEAAE 236

Query: 217 RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV------- 269
            L+EF+ +Y +   +E G  +  +     T V D+         +      H+       
Sbjct: 237 VLREFAVEYPLG--IEMGRFLAASCGKYYTQVKDLKSTGDANYAILDGGIHHLNYFGQRM 294

Query: 270 ----PDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
               P   +Y+ +             +CG  C   D+       K +++GD + F     
Sbjct: 295 AMQVPPISIYRAAGVELTELPDTDYTLCGSLCTVADVLVREVKLKKLELGDVLEFGHCGA 354

Query: 326 YNINRKN-WFNGINMPTIAVKNVDGTIKAIRE 356
           Y++      F    +P I   + +   + +RE
Sbjct: 355 YSVTEAPALFLSRQLPAIYAYSKEYGYECLRE 386


>gi|182434566|ref|YP_001822285.1| putative decarboxylase [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|178463082|dbj|BAG17602.1| putative decarboxylase [Streptomyces griseus subsp. griseus NBRC
           13350]
          Length = 464

 Score =  135 bits (340), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 61/371 (16%), Positives = 112/371 (30%), Gaps = 38/371 (10%)

Query: 9   IDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67
           ID + +  ++           GV    A K  +   +   L     G   +S  E+ L  
Sbjct: 43  IDTEGVRASVGALHDAFAATPGVLHTFAAKACSLVPVLRLLADCGMGCEVASPGELRLAL 102

Query: 68  E-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-AQKLHKKIGLRINP 124
           E  F        + A    EI   L+    +  +++ +L +     A      +GLR+NP
Sbjct: 103 EAGFPASRIVLDSPAKTREEIRLALALGVAVNADSLDELRRVDALRAPGTASVLGLRVNP 162

Query: 125 SVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFHNNCENKSFLCFS 176
            V              S+ G   +D        +   E   +  L  H   +       +
Sbjct: 163 QVGGGSIGPMSTATDTSKFGVALRDPGAREAIVEAFRERPWLTRLHAHVGSQGCPLDLIA 222

Query: 177 AMLKNIEKEFGHFI-----TQIEWISLGGGIH---------FTDKDYPVKDFCQRLKEFS 222
           A +    +            ++  + +GGG+           T  +Y           FS
Sbjct: 223 AGVAQTYELAEEINATPGVRRVTSLDIGGGLPVNFADETVRPTYPEYVAALTAAAPGLFS 282

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI------KNLVIVDSSVEAHVPDYL--- 273
            +Y   +  E G +++     +   V    +         +     ++    +PD     
Sbjct: 283 GRY--SLVTEFGRSLLAKNGFIGARVEYTKDAGGRRIALTHAGAQTATRTVLMPDAWPLR 340

Query: 274 LYQESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
           +        P  GP  A  V G  C AGD+         +  GD +   D   Y  +   
Sbjct: 341 IGAFGPDGAPKGGPPLAQDVAGPCCFAGDVVAYGRELPELAEGDLVVLYDTGAYYFSTPW 400

Query: 333 WFNGINMPTIA 343
            +N +  P + 
Sbjct: 401 AYNSLPRPAVY 411


>gi|295694996|ref|YP_003588234.1| Orn/DAP/Arg decarboxylase 2 [Bacillus tusciae DSM 2912]
 gi|295410598|gb|ADG05090.1| Orn/DAP/Arg decarboxylase 2 [Bacillus tusciae DSM 2912]
          Length = 477

 Score =  135 bits (340), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 55/407 (13%), Positives = 109/407 (26%), Gaps = 53/407 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+  +  L  N+           V   L   L+  +   +   + +   G    S+
Sbjct: 42  GTPLYVYSESHLWRNVRQLHDAFHYEHVPADLFFPLRASSNLAILQAIGRTGIGVEVGSM 101

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDK------- 110
            E+       F GE      A +  E+ +         I  +++S++             
Sbjct: 102 GELKKALTAGFSGERILLAGADRPPELLSHALERGVRAISTDSLSEIETLSTLGTRMARP 161

Query: 111 AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170
           A  L +   +   P+                 L    +  +      + GL         
Sbjct: 162 ADILLEVDPVLSFPNHRPPTPYYLKSGIDRHDLLSFAEQTLNYPGIRIRGLHVQVGTYRW 221

Query: 171 SFLCFSAM----LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE------ 220
                  +    L+ +E+         + + LGG +    ++  +    +   E      
Sbjct: 222 KPETLRRVGEIALELLEQIRSRLGVDGDVLFLGGELPLQVQELDLPSSDEAAAELDQDLL 281

Query: 221 ---------FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV---------IVD 262
                          ++  L PGE ++ N   L TTV  +                  + 
Sbjct: 282 AARTLAELLTQYDRPLRFVLSPGERLIANAGLLLTTVRQVKSKSIRDEEGNITDIVRWLI 341

Query: 263 SSVEAHVPDYLLYQESAT------IYPNTGPYTAMVCGRSCLAGDIFGE-------FHFE 309
                ++      + S            T      + G      D F +       +   
Sbjct: 342 VDAGLNILPQWPGEPSNRAALSVTRAEQTHDVPFKIGGPLYDHRDYFRDGAQGSEYYLLP 401

Query: 310 KPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
              + GDR++F D   Y +   +  N       A+    G +  IR 
Sbjct: 402 GNTRPGDRLAFLDTGAYVLEYMSEANSFPRAGAAMIRTSGQVHLIRH 448


>gi|218962050|ref|YP_001741825.1| diaminopimelate decarboxylase (DAP decarboxylase) [Candidatus
           Cloacamonas acidaminovorans]
 gi|167730707|emb|CAO81619.1| diaminopimelate decarboxylase (DAP decarboxylase) [Candidatus
           Cloacamonas acidaminovorans]
          Length = 449

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 58/395 (14%), Positives = 127/395 (32%), Gaps = 33/395 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP ++  ++++       L   +     V ++ + K      + +  +Q        S 
Sbjct: 46  GTPLFVFSEKQIRRTYRRLLETIRIHYPKVDIVWSYKTNYLAAICNIFHQEGAPAEVVSR 105

Query: 61  YEVMLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E          G    +N  + +  ++   +     I  + + +L + ++ A++L  K 
Sbjct: 106 MEYEKARSNGIPGNRIYFNGPSKRKQDLQIAIKEGAYIHIDHLEELYQIENIAEELAIKP 165

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGE---KCKDKIESEIKNVNGLMFHNNCENKSFLCF 175
            + I  ++      +          GE     +  I      + GL  H          +
Sbjct: 166 KVAIRVNMDTGISPMWTRFGFNYENGEAYRTVQRLISGNKVQLVGLHTHIGTFILDPNAY 225

Query: 176 SAML----KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------------ 219
                      +    +F   +++I +GGG    +         +               
Sbjct: 226 YWAATKLLNFAQTIKDNFGIVLDYIDMGGGFASNNTLIDQYTPGELASPSFEQYAEAIGT 285

Query: 220 -----EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDY 272
                 + ++Y  ++ LE G  ++  +  L  +VL        +  VI+D+ V  ++  +
Sbjct: 286 AFNASHYVKEYHPRLILETGRVLIDESGYLIASVLGKKNLPTGERAVILDAGVNINITAW 345

Query: 273 LLYQESATIYPNTGPYTAMVC-GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
              Q      P  G Y   V  G  C+  D+         +  GD +    V  YN+ + 
Sbjct: 346 WYKQRVLPTKPFPGTYQNTVFYGPLCMNIDVIRSAMPFPDLYYGDTVIISPVGAYNVTQW 405

Query: 332 NWFNGINMPTIAVKNVDGTIKAIR-EFSYNDYYNN 365
             F     P + + N  G +  IR +   +D  + 
Sbjct: 406 MQFIEY-RPNVCLINETGEVDVIRSQEDLSDLTSR 439


>gi|257791928|ref|YP_003182534.1| Diaminopimelate decarboxylase [Eggerthella lenta DSM 2243]
 gi|257475825|gb|ACV56145.1| Diaminopimelate decarboxylase [Eggerthella lenta DSM 2243]
          Length = 412

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 61/379 (16%), Positives = 119/379 (31%), Gaps = 34/379 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP YL D Q L + +         + +KL  A+K      +    +   D   + S  E
Sbjct: 16  PTPLYLFDHQVLNDRITRLRASLP-SRIKLCYAMKANPF--IVLEASALADCVEACSPGE 72

Query: 63  VML-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTI----IFNTVSQLNKFKDKAQKLHKK 117
           V++  +     E    +  +KD      L   D I       +  QL      A    ++
Sbjct: 73  VLICANAGVPFEKIVLSGVWKDRRCLDDLFQADRIPHRFTIESSQQLKDLVVLANAYRRR 132

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
           + +    S S ++F +          G K    I      + G+ +++  +  S      
Sbjct: 133 VNVLFRLS-SENQFGVDSATLKELIAGCKDDPFIS-----IQGIQYYSGTQKTSLKKLDR 186

Query: 178 MLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--------- 224
            L  + +           ++  I  G G+     D   +       E   +         
Sbjct: 187 ELNKLHRIVAEVEAACSVKLNEIEYGPGLPVEYFDEDEERARSAQDEPVAELATLLDGFP 246

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
           +   + LE G +I  +     T+V+D+         +       +  Y       +    
Sbjct: 247 FEGDVVLELGRSIAADCGAYLTSVVDVKTTSGQNYAIVDGGMHQISYYGHSMAMKSPVFR 306

Query: 285 T------GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGI 337
                        +CG  C   DI  +      + +GD ++F     Y        F   
Sbjct: 307 KVGATAGAAQPWNICGALCTVNDILAKQAPIVDLSVGDVLAFSRAGAYCATEGRALFLSR 366

Query: 338 NMPTIAVKNVDGTIKAIRE 356
           ++P++ V++V G ++  R 
Sbjct: 367 DLPSVVVRDVSGNMRIARH 385


>gi|37524753|ref|NP_928097.1| hypothetical protein plu0752 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36784178|emb|CAE13047.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 419

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 46/378 (12%), Positives = 102/378 (26%), Gaps = 36/378 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP++   ++ +   +           + +  A+K      +   L+Q ++G   +S  E
Sbjct: 43  QTPFFAYSRKHIDQQVCLLRKYLPE-KISIHYAIKANPFVPLIHHLSQKIEGFDVASANE 101

Query: 63  VMLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           + L        E  ++      D E+   ++    +   ++++L + +  ++KL     +
Sbjct: 102 MALALNTGVSPEDISFAGPGKTDTELKRAIAAQVLLNVESLNELRRIQILSEKLGLCARV 161

Query: 121 RINPSVSYSKFILADPNRPFSR-LGEKCKDKIESEIK--------NVNGLMFHNNCENKS 171
            +  +  Y+            R  G       E+ +            G   +   +N  
Sbjct: 162 SLRINPDYNLNSSGMKMGGGPRQFGMDVVYVPEALMFIRDYPDSLVFEGFQIYPGSQNLC 221

Query: 172 FLCFSAMLKNIEKEFGHFIT----QIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
                                    +   +LGGG          +     +     K   
Sbjct: 222 AEHLIEAQNKALNLVIELSHSAPSPVRRFNLGGGFGVPYFQGNTELNITEVGNAMHKLVE 281

Query: 226 -------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY------ 272
                   V+I LE G  +V ++    T +++   +     +V      H          
Sbjct: 282 RAEKFLPEVEIILELGRYLVASSGIYVTKIVERKISHDMTFLVTDGGMNHHLSASGNLGQ 341

Query: 273 ----LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
                               T  + G  C   DI            GD +       Y +
Sbjct: 342 LIRRNYPAIIGNKIKGEKRETVNIVGPLCTPLDILVHQGDMSVATPGDLVVIFQSGAYGL 401

Query: 329 NRK-NWFNGINMPTIAVK 345
           +   N F         + 
Sbjct: 402 SASPNNFLSQTNAVEVLV 419


>gi|50303419|ref|XP_451651.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49640783|emb|CAH02044.1| KLLA0B02673p [Kluyveromyces lactis]
          Length = 441

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 57/363 (15%), Positives = 108/363 (29%), Gaps = 33/363 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++ + L    + +    V    A+KC     +   L         +S  E+  
Sbjct: 68  FFVCDLGEI-SRLRNY-WTQILPRVTPFYAVKCNPNIEIIKRLASMSTNFDCASKSEIEK 125

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        +          +    +K K      ++ LRI  
Sbjct: 126 VLACGVDPERIIYANPCKASSFIRFAAKNGVKKSTFDNIDELYKIKKYHPESELLLRIVT 185

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S ++  L+              + ++    N+ G+ FH       F   +  +K+  K
Sbjct: 186 DDSSAQCRLSTKYGCELDDVPVLLETVKELGLNLIGVSFHVGSGASDFSTVTQAVKDGRK 245

Query: 185 EFG----HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV---QIYLEPGEAI 237
            F       +  ++ + +GGG  F             L  F  + +        EPG   
Sbjct: 246 VFDMAESRGLPALKMLDVGGGYQFDTITEVADVLNAALDYFFPQETHSDVSFIAEPGRYF 305

Query: 238 VTNTTTLNTTVLD----------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN--- 284
           V    TL  TV+           I  N      ++  +  H             +     
Sbjct: 306 VATAFTLAATVIGKRNNSDSESMIYINDGVYGNMNCILFDHQEPSPRVLYHKNRFHYMDI 365

Query: 285 ---------TGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWF 334
                       Y   + G +C   D   + ++ K  + IGD + F+++  Y  +    F
Sbjct: 366 NSSSKAKCDACNYKVSIWGPTCDGLDCVSKEYYMKYDLDIGDWVHFDNIGAYTCSAATPF 425

Query: 335 NGI 337
           NG 
Sbjct: 426 NGF 428


>gi|32526681|dbj|BAC79204.1| putative ornithine decarboxylase [Oryza sativa Japonica Group]
          Length = 414

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 52/358 (14%), Positives = 100/358 (27%), Gaps = 24/358 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  K+++             V+   A+KC     M   L     G   +S  E+  
Sbjct: 52  FHVFDLAKVVDLHRGWRRAL--PDVRPCYAVKCNPDGAMLAALAALGAGFDCASRAEIEA 109

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN- 123
                    T  Y    K        +    +   T     +     +   +   L    
Sbjct: 110 VLALGVRPATIVYANPCKPEAHLEYAAEVG-VNLTTYDSEEEVAKVRRCHPRCELLLRIK 168

Query: 124 -PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
            P    +K  L                  + E   V G+ FH          +   ++  
Sbjct: 169 APDSGDAKVDLGLKYGANPDEVLPLLRAAQREGVAVAGVSFHVGSGASRADVYRGAIEAA 228

Query: 183 EKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFC--QRLKEFSEKYSVQIYLEPGEA 236
            + F       +  +  + +GGG                   + F +   V++  EPG  
Sbjct: 229 REAFDAAAALGMPPMRVLDIGGGFMAGRTFDEAAAVINRALERHFGDLPCVEVIGEPGRY 288

Query: 237 IVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGP---- 287
                 TL   V+      +            S+   + D+ + +         G     
Sbjct: 289 FAETAFTLAARVIGKRTRGELREYWIDDGLYGSLNCILMDHYVPRPRPLAAAAAGEDTTA 348

Query: 288 ---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
              + + V G +C + D     +    + +GD + F+D+  Y     + FNG     I
Sbjct: 349 ATTHASTVFGPTCDSLDTVVTGYQLPEMSVGDWLVFDDMGAYTTAAGSNFNGFATSAI 406


>gi|84686404|ref|ZP_01014298.1| decarboxylase, pyridoxal-dependent [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84665587|gb|EAQ12063.1| decarboxylase, pyridoxal-dependent [Rhodobacterales bacterium
           HTCC2654]
          Length = 385

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 50/365 (13%), Positives = 107/365 (29%), Gaps = 24/365 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +  P  ++D  ++             A   +  A+K      + + L        ++S  
Sbjct: 24  VDRPTLVLDVDRVEYQFHQLAQGLGRAN--IHYAVKANPTREIIERLVNIGSHFDAASRA 81

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           E+ L   +       ++    K     A   +    +F   ++    K        ++ +
Sbjct: 82  EIELCLSQGADPADISFGNTVKKVGDIAFAWHAGVTLFAADAEEELEKIAEHAPGAEVYI 141

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF---SA 177
           R+    S + + L+                         GL FH   + K    +     
Sbjct: 142 RMIVENSQADWPLSRKFGCRGEKAIDLMAYAVELGLKPVGLSFHVGSQTKRAEMWTGVLD 201

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEF-----SEKYSVQIYLE 232
            +  I          ++ +++GGG      +          +             ++  E
Sbjct: 202 AVAEIWHRAVAEGYDLDLLNIGGGFPAFYGEAIDAPAAYAARVMDLVTARFGDVPRVMAE 261

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------DYLLYQESATIYPN 284
           PG  +V     +   VL +S+   + +     ++            + + YQ  AT    
Sbjct: 262 PGRGLVAECGAIIAEVLLVSKKSDDDMHRWVYLDIGRFSGLAETEGEAIRYQ-IATPRDG 320

Query: 285 TGPYTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGINMP 340
                 ++ G SC + D+  E         +K GDR    +   Y  +  +  FNG    
Sbjct: 321 GEMGPCILAGPSCDSADVLYEKRPIMLPLALKSGDRAIIRNAGAYTSSYSSVGFNGFPPL 380

Query: 341 TIAVK 345
            + V 
Sbjct: 381 DVVVL 385


>gi|218885768|ref|YP_002435089.1| Orn/DAP/Arg decarboxylase 2 [Desulfovibrio vulgaris str. 'Miyazaki
           F']
 gi|218756722|gb|ACL07621.1| Orn/DAP/Arg decarboxylase 2 [Desulfovibrio vulgaris str. 'Miyazaki
           F']
          Length = 474

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 54/402 (13%), Positives = 105/402 (26%), Gaps = 47/402 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP  ++D   L   +            G  L  + K     G+   L+    G    S 
Sbjct: 54  GTPLLVVDAAALRRRVQDVQAALDEVLPGAMLAYSYKTNCIPGILRMLHDAGVGAEVISP 113

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKI 118
           YE  L       G    YN   K  E  A        +  ++  +++     A++  +  
Sbjct: 114 YEYWLSESLGVDGGQVVYNGVDKSRESIARAVARGTLVNIDSRDEVDVVLAAAREQRRTA 173

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
            + +  +++ S     DP                 +  ++  L F+     +     +  
Sbjct: 174 RVGLRLALNRSAQFGLDPEGDDLAH-VVRNCLDAPDHADLVALHFNVTSNARHSGYHARC 232

Query: 179 L----KNIEKEFGHFITQIEWISLGGGIH-------------------------FTDKDY 209
           L      +         +I  + +GGG                           + D   
Sbjct: 233 LSRALDVMSWLAREHGVRIRLLDVGGGFGVETSKNMSGAEYGLYRLFGVQPGAAWMDPFQ 292

Query: 210 PVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD 262
             + + + L +    +          + +EPG  + +    L T V  + E         
Sbjct: 293 DFRLYLRDLADTLRAFCAQNDLPVPGVCIEPGRLLTSKAELLLTQVKAVKERPGAEPFAI 352

Query: 263 SSVEAH---VPDYLLYQES--ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDR 317
           +         P    + E+  A+           V GR C   D          +  GD 
Sbjct: 353 TDAGRLSQAFPCDFEWHEAFLASDLRRPPSRPYTVTGRVCTRSDWLYRGKLLPELATGDV 412

Query: 318 ISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           ++  D   Y  +    F       +            R   +
Sbjct: 413 LAVMDAGAYFSSYAMNF-AFPRAAVVAVEDGRARVLRRREDF 453


>gi|254571071|ref|XP_002492645.1| Ornithine decarboxylase [Pichia pastoris GS115]
 gi|238032443|emb|CAY70466.1| Ornithine decarboxylase [Pichia pastoris GS115]
 gi|328353351|emb|CCA39749.1| ornithine decarboxylase [Pichia pastoris CBS 7435]
          Length = 466

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 54/370 (14%), Positives = 109/370 (29%), Gaps = 39/370 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++L          K   +K   A+KC     + + L     G   +S  E+  
Sbjct: 87  FFVCDLGEVLRLYKNWCE--KLPRIKPYYAVKCNNDPKLLEVLATLGTGFDCASTGEINT 144

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-QKLHKKIGLRIN 123
                   +  AY    K             +   T    ++    A      ++ LRI+
Sbjct: 145 ILNLGVSPDRIAYANPCKSISSVRNAK-KVNVNLTTFDNSDELYKIAKYHPESRLLLRIS 203

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
                ++  L+                 +    NV G+ FH       F   +   K+  
Sbjct: 204 TDDESAQCRLSTKFGASMSESFDLLRLAKKLQLNVAGVAFHVGSGASDFSAITQATKDSS 263

Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ---IYLEPGEAI 237
             F        ++  + +GGG      D   +   +   ++  +       I  EPG   
Sbjct: 264 ILFEEGTRLGFKMNILDVGGGFVLQTFDESSRYLREACDQYFPEKLFPELKIIAEPGRYF 323

Query: 238 VTNTTTLNTTVLDISE--------------NIKNLVIVDSSVEAHVPDYLL--------- 274
             +  TL   V+                   +     + +++   + D+ L         
Sbjct: 324 AASAFTLACNVIARRMTTQSSDTTTPTAHAMLYVNDGLYNNLNCVLYDHQLPKGKALTIN 383

Query: 275 ----YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPV-KIGDRISFEDVAGYNIN 329
               Y    ++  +       + G +C   D   E  +   + ++GD I F+++  Y   
Sbjct: 384 GRFVYDLQFSLPESEKKIPVSIWGPTCDGLDCISEMTYVSSLMEVGDWIFFDEIGAYTSA 443

Query: 330 RKNWFNGINM 339
               FNG   
Sbjct: 444 AATAFNGFQK 453


>gi|326202215|ref|ZP_08192085.1| Orn/DAP/Arg decarboxylase 2 [Clostridium papyrosolvens DSM 2782]
 gi|325988010|gb|EGD48836.1| Orn/DAP/Arg decarboxylase 2 [Clostridium papyrosolvens DSM 2782]
          Length = 388

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 52/374 (13%), Positives = 118/374 (31%), Gaps = 30/374 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+Y+ D   L N ++          V++  A+K      +   +   +D     S  E
Sbjct: 14  QTPFYIFDTDILANQINKIRTAL-GTDVEICYAMKANPF--VIKEMQDIVDYFEVCSHGE 70

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLS----NCDTIIFNTVSQLNKFKDKAQKLHKK 117
             +             +  YK+      +     N       ++SQ     D A +  + 
Sbjct: 71  FNICELADIDVNKIVMSGVYKNFTDIETMIYEYGNQIIYTIESLSQWKNIADFALEHQRH 130

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE----NKSFL 173
           + + +                  + + E   ++ ++   ++ G+ F +  +    +K   
Sbjct: 131 VRVLLRL------TTGNQFGMDETVIREIIANRNKNPYIDIEGIQFFSGTQKKSTSKFEK 184

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEFSEKYSVQ 228
               +          +   I+ I  G G+             +       +     +  +
Sbjct: 185 ELEMLDNLCSDLQKQYAFNIKKIEYGPGLPICYFEDNNNVEDLMLDLLAKQIKKLNFKGK 244

Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP---DYLLYQESATIYPNT 285
           I LE G  I  +     T+V+D+  N      +      H+      +  ++   I+ N 
Sbjct: 245 ITLEIGRFIAASCGFYVTSVVDVKVNNNENFCIVDGGIHHLNYLGQIMGMKKPPIIHWNE 304

Query: 286 G---PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPT 341
                    VCG  C   D+  + +    +  GD + F+ V  Y++    + F    +P 
Sbjct: 305 KSGEAKEWTVCGSLCTVNDVLVKQYPFVDISRGDTLIFKKVGAYSVTEGISLFLSHELPQ 364

Query: 342 IAVKNVDGTIKAIR 355
           + + +     +  R
Sbjct: 365 VLLYSEKCKFRLAR 378


>gi|297609894|ref|NP_001063827.2| Os09g0543400 [Oryza sativa Japonica Group]
 gi|255679105|dbj|BAF25741.2| Os09g0543400 [Oryza sativa Japonica Group]
          Length = 408

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 52/358 (14%), Positives = 100/358 (27%), Gaps = 24/358 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  K+++             V+   A+KC     M   L     G   +S  E+  
Sbjct: 46  FHVFDLAKVVDLHRGWRRAL--PDVRPCYAVKCNPDGAMLAALAALGAGFDCASRAEIEA 103

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN- 123
                    T  Y    K        +    +   T     +     +   +   L    
Sbjct: 104 VLALGVRPATIVYANPCKPEAHLEYAAEVG-VNLTTYDSEEEVAKVRRCHPRCELLLRIK 162

Query: 124 -PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
            P    +K  L                  + E   V G+ FH          +   ++  
Sbjct: 163 APDSGDAKVDLGLKYGANPDEVLPLLRAAQREGVAVAGVSFHVGSGASRADVYRGAIEAA 222

Query: 183 EKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFC--QRLKEFSEKYSVQIYLEPGEA 236
            + F       +  +  + +GGG                   + F +   V++  EPG  
Sbjct: 223 REAFDAAAALGMPPMRVLDIGGGFMAGRTFDEAAAVINRALERHFGDLPCVEVIGEPGRY 282

Query: 237 IVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGP---- 287
                 TL   V+      +            S+   + D+ + +         G     
Sbjct: 283 FAETAFTLAARVIGKRTRGELREYWIDDGLYGSLNCILMDHYVPRPRPLAAAAAGEDTTA 342

Query: 288 ---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
              + + V G +C + D     +    + +GD + F+D+  Y     + FNG     I
Sbjct: 343 ATTHASTVFGPTCDSLDTVVTGYQLPEMSVGDWLVFDDMGAYTTAAGSNFNGFATSAI 400


>gi|109001672|ref|XP_001106935.1| PREDICTED: arginine decarboxylase-like isoform 10 [Macaca mulatta]
 gi|109001675|ref|XP_001107003.1| PREDICTED: arginine decarboxylase-like isoform 11 [Macaca mulatta]
          Length = 460

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 56/385 (14%), Positives = 125/385 (32%), Gaps = 37/385 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++       +++    V+   A+KC ++ G+   L Q   G + ++  E+ L
Sbjct: 41  FFVADLGAIVR--KHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 98

Query: 66  G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             H         Y    K        +     + +  +++   K        K+ L I  
Sbjct: 99  VQHIGVPASKIIYANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKMVLCIAT 158

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S+S   L+       +      +  +     V G+ FH          ++  + ++  
Sbjct: 159 DDSHSLSRLSLKFGVSLKSCRHLLENAKKSHVEVVGVSFHIGSGCPDPQAYAQSIADVRL 218

Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPGE 235
            F        ++  + LGGG   T+      +    +        F E   V I  E G 
Sbjct: 219 VFEMGTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEGCGVDILAELGR 278

Query: 236 AIVTNTTTLNTTVLDI-----------------------SENIKNLVIVDSSVEAHVPDY 272
             VT+  T+  +++                           +     I +S +  ++   
Sbjct: 279 YYVTSAFTVAVSIIAKKEVLLDQPGKEEENGSTTKTVVYHLDEGVYGIFNSVLFDNICPT 338

Query: 273 LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
            + Q+  +       Y++ + G +    D   E  +   + +GD + F+++  Y +   +
Sbjct: 339 PILQKKPSTEQP--LYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNMGAYTVGMGS 396

Query: 333 WFNGINMPTIAVKNVDGTIKAIREF 357
            F G     I         +A+R  
Sbjct: 397 PFGGTQACHITYAMSRVAWEALRRQ 421


>gi|260437385|ref|ZP_05791201.1| putative pyridoxal-dependent decarboxylase, pyridoxal binding
           domain protein [Butyrivibrio crossotus DSM 2876]
 gi|292810298|gb|EFF69503.1| putative pyridoxal-dependent decarboxylase, pyridoxal binding
           domain protein [Butyrivibrio crossotus DSM 2876]
          Length = 402

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 53/382 (13%), Positives = 122/382 (31%), Gaps = 27/382 (7%)

Query: 6   YYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           +YL+D ++   N            +   +  + K      +   +N+        S  E 
Sbjct: 19  FYLLDSEQFKKNYLELKNAFSELYSNFNIAYSYKTNYTPKLCKIVNELEGYAEVVSEMEA 78

Query: 64  MLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            L  +     E   +N       ++   L    T+  +++ +    +  A+   K + + 
Sbjct: 79  ELAIKCGVKPERIIWNGPIKNPDKLKEYLHMGVTVNMDSIEEAEYIQKLAEVTEKTLNVG 138

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           I  +      +++           K    I +   N++ + F  +   +    + A  K 
Sbjct: 139 IRCNYDVKDGVVSRFGFDIYSEEFKKVLDIVTHTTNLHFVNFQCHFAKRQVEYWPARAKG 198

Query: 182 IEKEFGHFITQIEWISLGGGIH----------FTDKDYPVKDFCQRLKEFSEKYSVQ--- 228
           + +         E I +GGGI           F  +    K + +       +Y      
Sbjct: 199 MLELLDRINVIPERIDIGGGIFGKMPDFLKEQFPYEVPGYKKYAKSAAAVFAEYFNDKKI 258

Query: 229 ---IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285
              + +EPG A+V +      TV  I       +      + ++    +      I+   
Sbjct: 259 KPELIIEPGSALVGDCMKFVGTVKTIKNVRGKYIASVLGSQKNISMTGVNPPMEVIHMGR 318

Query: 286 GPYTA---MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
                    + G +C+ GD+  + +    + + D +   +   Y++  K  F   N P  
Sbjct: 319 TTKDYKDLDIVGFTCIEGDVLYKNYN-GKLALDDVLVISNCGSYSLVMKPPFILPNFP-- 375

Query: 343 AVKNVDGTIKAIRE-FSYNDYY 363
            +      I+ I+   ++ D +
Sbjct: 376 VLDISGEEIEVIKRAETFEDIF 397


>gi|149927611|ref|ZP_01915864.1| putative diaminopimelate decarboxylase protein [Limnobacter sp.
           MED105]
 gi|149823665|gb|EDM82893.1| putative diaminopimelate decarboxylase protein [Limnobacter sp.
           MED105]
          Length = 391

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 50/376 (13%), Positives = 101/376 (26%), Gaps = 34/376 (9%)

Query: 3   KTP---YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
            TP    Y+ +   L  +             +L  A K      + +TL  ++DG  ++S
Sbjct: 16  GTPPWCAYVYNLPALAAHAQYMKRHLPR-NCELYYAAKANPDVRLLNTLAPHVDGFEAAS 74

Query: 60  LYE-VMLGHEKFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             E   L  + F             +    ++      I   ++++L +         + 
Sbjct: 75  AGELAHLNDQHFSKPLIFGGPGKTTEDLQQSLHQKVACIHVESLTELKRLALVCANTGQT 134

Query: 118 IGLRINPSVS---------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE 168
             + +  +++                        LG       ES      G  FH+   
Sbjct: 135 QAIMLRMNITLDGVASSKLQMGGQATPFGLDPCDLGTALALLQESPHLEFEGFHFHSMSH 194

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK----- 219
                      +   +   +    +  + + I++GGGI    +    +            
Sbjct: 195 QLCVENHLKLIARYFEITRQWESQWHIRCKVINVGGGIGVNYQCVDEQFNWAEFCTGLGE 254

Query: 220 --EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQ 276
                +  + QI  E G  +          V+D+ ++      +      H         
Sbjct: 255 LITQHDMQTRQIRFECGRYVSAFCGYYVMEVIDLKQSHGQWFAIGKGGTHHFRTPAAQGH 314

Query: 277 ESATIYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                    G        T  V G+ C   D   +    + + +GD + F     Y  N 
Sbjct: 315 NHPVWVHRNGQTAVVVNSTVNVVGQLCTPKDRLHQQLTVQELALGDYMVFTLAGAYAWNI 374

Query: 331 KN-WFNGINMPTIAVK 345
            +  F     P I   
Sbjct: 375 SHQNFLMHAAPQIIYL 390


>gi|226290836|gb|ACO40487.1| ornithine decarboxylase [Grateloupia imbricata]
          Length = 420

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 58/367 (15%), Positives = 114/367 (31%), Gaps = 36/367 (9%)

Query: 14  LLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFG 71
           + + L +     +    V+   A+KC     M   L     G   +S  E+    +    
Sbjct: 8   VRSALLSLQAFTEKMPRVRPFYAVKCNPDPVMLRVLANLGCGFDCASAKEMATVLDMGVE 67

Query: 72  GETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYS 129
            E+  +    K          +N   + F+ V +L K   +       + +R +   +  
Sbjct: 68  AESIVFAHPCKRPLDLEFAIETNVTRMTFDCVDELEKVAAECPHAELVLRIRADDPSAVV 127

Query: 130 KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF--- 186
           +F       P +          +    NV G+ FH    ++S   +   ++   + F   
Sbjct: 128 QFGHKYGADPQTEAPMLLA-AAKQLEMNVVGVSFHVGSGSQSCDAYPLAVEAARRVFDQA 186

Query: 187 GHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKYSV--------QIYLEPGE 235
                +++ + LGGG           P++D  + +    +++          ++  EPG 
Sbjct: 187 ADLGYEMQLLDLGGGFWGRFDATGHVPLEDVSEAINSALDRFFPVNSSGRKVEVIAEPGR 246

Query: 236 AIVTNTTTLNTTVLDISEN------IKNLVIVDSSVEAHVPDYL---------LYQESAT 280
                 TT+   V  + +             V  S    V D+                 
Sbjct: 247 YFAEACTTMYALVTTVKDRPDGSRSYYITDGVYGSFNNLVYDHGSVTAKVLRGPGMPPVQ 306

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM- 339
                    + V G +C   D+  +      ++ GD + F +   Y I     FNGI + 
Sbjct: 307 PVETETRLPSTVFGPTCDGVDLIFKDVPMPLLRRGDWLQFPNFGAYTIAGACAFNGIPVD 366

Query: 340 -PTIAVK 345
            P I   
Sbjct: 367 NPDIMYV 373


>gi|326775090|ref|ZP_08234355.1| Diaminopimelate decarboxylase [Streptomyces cf. griseus XylebKG-1]
 gi|326655423|gb|EGE40269.1| Diaminopimelate decarboxylase [Streptomyces cf. griseus XylebKG-1]
          Length = 464

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 61/371 (16%), Positives = 109/371 (29%), Gaps = 38/371 (10%)

Query: 9   IDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67
           ID + +  ++           GV    A K  +   +   L     G   +S  E+ L  
Sbjct: 43  IDTEGVRASVGALHDAFAATPGVLHTFAAKACSLVPVLRLLADCGMGCEVASPGELRLAL 102

Query: 68  E-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-AQKLHKKIGLRINP 124
           E  F        + A    EI   L+    +  +++ +L +     A      +GLR+NP
Sbjct: 103 EAGFPASRIVLDSPAKTREEIRLALALGVAVNADSLDELRRVDALRAPGTASVLGLRVNP 162

Query: 125 SVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFHNNCENKSFLCFS 176
            V              S+ G   +D        +   E   +  L  H   +       +
Sbjct: 163 QVGGGSIGPMSTATDTSKFGVALRDPGAREAIVEAFRERPWLTRLHAHVGSQGCPLDLIA 222

Query: 177 AMLKNIEKEFGHFITQIEWI-----SLGGGIH---------FTDKDYPVKDFCQRLKEFS 222
           A +    +                  +GGG+           T  +Y           FS
Sbjct: 223 AGVAQTYELAEEINATPGVRGVTSLDIGGGLPVNFADETVRPTYPEYVAALTAAAPGLFS 282

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI------KNLVIVDSSVEAHVPDYLLYQ 276
            +Y   +  E G +++     +   V    +         +     ++    +PD    +
Sbjct: 283 GRY--SLVTEFGRSLLAKNGFIGARVEYTKDAGGRRIALTHAGAQTATRTVLMPDAWPLR 340

Query: 277 ---ESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                    P  GP  A  V G  C AGD+         +  GD +   D   Y  +   
Sbjct: 341 IGVFGPDGTPKGGPPLAQDVAGPCCFAGDVVAYGRELPELAEGDLVVLYDTGAYYFSTPW 400

Query: 333 WFNGINMPTIA 343
            +N +  P + 
Sbjct: 401 AYNSLPRPAVY 411


>gi|118498282|ref|YP_899332.1| pyridoxal-dependent decarboxylase [Francisella tularensis subsp.
           novicida U112]
 gi|194323865|ref|ZP_03057640.1| Pyridoxal-dependent decarboxylase [Francisella tularensis subsp.
           novicida FTE]
 gi|118424188|gb|ABK90578.1| pyridoxal-dependent decarboxylase [Francisella novicida U112]
 gi|194321762|gb|EDX19245.1| Pyridoxal-dependent decarboxylase [Francisella tularensis subsp.
           novicida FTE]
          Length = 387

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 51/379 (13%), Positives = 106/379 (27%), Gaps = 33/379 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           ++  D   L  +      +     VKL  ALK      +    ++       +S+ E+  
Sbjct: 5   FFYYDLDMLEAHAKELHRL----PVKLWYALKANPLSRIIKVFDEQKISFDVASIGELDQ 60

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKK--IGL 120
                   +   +    K                +  +++Q     +  +K +    + L
Sbjct: 61  VLAQGVNPKNILHTGPAKSYSQLEYFLAQGVRIFVIESINQFKDLSNLVEKKNINVKVLL 120

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLMFHNNCENKSF 172
           R+    +  +  +       +  G    D  +        S   ++ G+           
Sbjct: 121 RVQLVWNDQENNVLGGGGCVTPFGLSINDWRDFFNSAPNISNNMSIIGMHCFQWGNILCL 180

Query: 173 LCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY--- 225
              S + +   K            ++ I LGGGI               L     K    
Sbjct: 181 NKLSQIWEITTKALLDLSEAINVSLKVIDLGGGIGVPYNAGQKSISINDLIFCFNKLKEE 240

Query: 226 --SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-PDYLLYQESATIY 282
              ++ +LE G   V  +    T ++D        ++V      H+    L  +      
Sbjct: 241 FPDIEYWLELGRYAVAESGVYVTKIVDRKSVNNIDLLVTDGGAQHLVRPALTGESFPIQL 300

Query: 283 PNTGPY----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGI 337
                        + G  C + D  G     K + + D + F+    Y        F   
Sbjct: 301 LREEACGETNDFQIHGPLCTSLDKAGIASLPKDIGLNDYLIFKQTGAYGFTESMPLFLCH 360

Query: 338 NMPTIAVKNVDGTIKAIRE 356
           N+P   +    G ++ +R+
Sbjct: 361 NLPAEVIFYK-GQLQTVRQ 378


>gi|242050040|ref|XP_002462764.1| hypothetical protein SORBIDRAFT_02g031560 [Sorghum bicolor]
 gi|241926141|gb|EER99285.1| hypothetical protein SORBIDRAFT_02g031560 [Sorghum bicolor]
          Length = 436

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 54/371 (14%), Positives = 104/371 (28%), Gaps = 41/371 (11%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           ++ +D  K+L+ +           V+   A+KC     +   L     G   +S  EV  
Sbjct: 55  FHALDLNKVLDLIAAWRRAL--PDVRPYYAVKCNPEPAILGALAALGAGFDCASRAEVEA 112

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSN----------------------CDTIIFNTVS 102
                    +  Y    K        +                          +   T  
Sbjct: 113 VLRLGVQPSSIVYANPCKPEPHLEYAAEVGVNLATYDSEEEVGQGQALPPQVGVNLATYD 172

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGE--KCKDKIESEIKNVNG 160
              +     +   K   L        ++       +  +   E        +    NV G
Sbjct: 173 SEEEVSKVRRCHPKCELLLRLKGPDGAEAKYNLGTKYGAHADEVVPLLRAAQRAGINVVG 232

Query: 161 LMFHNNCENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGI---HFTDKDYPVKD 213
           + FH          +   ++     F       +  +  + +GGG      T  +     
Sbjct: 233 VSFHVGSGVSRVDVYRGAIEAARAAFDEAVALGMPPMRVLDIGGGFTAGATTFGEAAAVV 292

Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAH 268
               L  F +  SV++  EPG        TL   V+      +            S+   
Sbjct: 293 NDALLHYFGDLPSVEVIGEPGRYFAETAFTLAARVIGKRTRGEVREYWIDDGLYGSLNCI 352

Query: 269 VPDYLLYQESA--TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
           + D    +     +  P    +T+ V G +C + D     +    V +GD + F+++  Y
Sbjct: 353 LMDQYDPRPRPLGSPRPGEKTHTSTVFGPTCDSQDRMVTDYQLPEVSVGDWLIFDNMGAY 412

Query: 327 NINRKNWFNGI 337
           +    + FNG 
Sbjct: 413 STAAGSKFNGF 423


>gi|325914562|ref|ZP_08176905.1| diaminopimelate decarboxylase [Xanthomonas vesicatoria ATCC 35937]
 gi|325539213|gb|EGD10866.1| diaminopimelate decarboxylase [Xanthomonas vesicatoria ATCC 35937]
          Length = 398

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 53/370 (14%), Positives = 106/370 (28%), Gaps = 32/370 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            YL D   L  +    +  +  A  +L  A K  A   +  TL  ++DG   +S  E+  
Sbjct: 27  AYLYDLTALDAH-AAWMRAQLPAQCELFYAAKANAEPQILHTLAPHVDGFEGASGGELAW 85

Query: 66  GHEKFGGETHAY-NVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
            H +       +      D E+    +  D  +   ++ +L +    A +  + + + + 
Sbjct: 86  LHAQQPQAALLFGGPGKLDSELAQAAALPDCTVHVESIRELQRLAAIAARAGRCVPVFLR 145

Query: 124 PS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNCENKSFL 173
            +          L    +P    G   +D   +           + G  FH     +   
Sbjct: 146 MNIAVPGAQGTRLMMGGQPSP-FGLDPQDLDAAMHLLRVSPSLRLEGFHFHLMSHQREAG 204

Query: 174 CFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKY 225
               ++    +    +          ++ GGG           +    FC  L     ++
Sbjct: 205 AQLHLVAAYLRTVQQWRQTYALGPLRVNAGGGFGVDYLAPDSSFDWAGFCAGLPALLHEH 264

Query: 226 SV--QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
               ++ LEPG  +  +       VLD+  +      +      H               
Sbjct: 265 GSTLRLRLEPGRYVSASCGWYLMEVLDLKRSHGAWFAIARGGTHHFRTPAAQAHDHPFRV 324

Query: 284 NTGPY-------TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFN 335
             G +          + G+ C   D+         +  GD ++F     Y  N  +  F 
Sbjct: 325 LRGTHAPVISDTPVTLVGQLCTPKDVLARNQPVAALAPGDCLAFPLAGAYAWNISHQQFL 384

Query: 336 GINMPTIAVK 345
               P     
Sbjct: 385 MHPPPQKVFL 394


>gi|119627876|gb|EAX07471.1| arginine decarboxylase, isoform CRA_c [Homo sapiens]
          Length = 528

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 51/362 (14%), Positives = 118/362 (32%), Gaps = 37/362 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++       +++    V+   A+KC ++ G+   L Q   G + ++  E+ L
Sbjct: 109 FFVADLGAIVR--KHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 166

Query: 66  G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             H              K        +     + +  +++   K        K+ L I  
Sbjct: 167 VQHIGIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKMVLCIAT 226

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S+S   L+       +      +  +     V G+ FH          ++  + +   
Sbjct: 227 DDSHSLSCLSLKFGVSLKSCRHLLENAKKHHVEVVGVSFHIGSGCPDPQAYAQSIADARL 286

Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPGE 235
            F        ++  + LGGG   T+      +    +        F E   V I+ E G 
Sbjct: 287 VFEMGTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEGCGVDIFAELGR 346

Query: 236 AIVTNTTTLNTTVLDI-----------------------SENIKNLVIVDSSVEAHVPDY 272
             VT+  T+  +++                           +     I +S +  ++   
Sbjct: 347 YYVTSAFTVAVSIIAKKEVLLDQPGREEENGSTSKTIVYHLDEGVYGIFNSVLFDNICPT 406

Query: 273 LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
            + Q+  +       Y++ + G +    D   E  +   + +GD + F+++  Y +   +
Sbjct: 407 PILQKKPSTEQP--LYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNMGAYTVGMGS 464

Query: 333 WF 334
            F
Sbjct: 465 PF 466


>gi|9631775|ref|NP_048554.1| hypothetical protein PBCV1_A207R [Paramecium bursaria Chlorella
           virus 1]
 gi|145579908|pdb|2NVA|A Chain A, The X-Ray Crystal Structure Of The Paramecium Bursaria
           Chlorella Virus Arginine Decarboxylase Bound To Agmatine
 gi|145579909|pdb|2NVA|B Chain B, The X-Ray Crystal Structure Of The Paramecium Bursaria
           Chlorella Virus Arginine Decarboxylase Bound To Agmatine
 gi|145579910|pdb|2NVA|C Chain C, The X-Ray Crystal Structure Of The Paramecium Bursaria
           Chlorella Virus Arginine Decarboxylase Bound To Agmatine
 gi|145579911|pdb|2NVA|D Chain D, The X-Ray Crystal Structure Of The Paramecium Bursaria
           Chlorella Virus Arginine Decarboxylase Bound To Agmatine
 gi|145579912|pdb|2NVA|E Chain E, The X-Ray Crystal Structure Of The Paramecium Bursaria
           Chlorella Virus Arginine Decarboxylase Bound To Agmatine
 gi|145579913|pdb|2NVA|F Chain F, The X-Ray Crystal Structure Of The Paramecium Bursaria
           Chlorella Virus Arginine Decarboxylase Bound To Agmatine
 gi|145579914|pdb|2NVA|G Chain G, The X-Ray Crystal Structure Of The Paramecium Bursaria
           Chlorella Virus Arginine Decarboxylase Bound To Agmatine
 gi|145579915|pdb|2NVA|H Chain H, The X-Ray Crystal Structure Of The Paramecium Bursaria
           Chlorella Virus Arginine Decarboxylase Bound To Agmatine
 gi|1181370|gb|AAC96575.1| PBCV-1 arginine decarboxylase [Paramecium bursaria Chlorella virus
           1]
          Length = 372

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 56/359 (15%), Positives = 111/359 (30%), Gaps = 40/359 (11%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+   + + + +D    +     V    A+KC     +  T+         +S  E+  
Sbjct: 19  FYVSSPKIVEDLIDQWTILFPR--VTPHYAVKCNNDEVLLKTMCDKNVNFDCASSSEIKK 76

Query: 66  GHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
             +         +    K  D  I A     D   F++  +L+K        + K+ LRI
Sbjct: 77  VIQIGVSPSRIIFAHTMKTIDDLIFAKDQGVDIATFDSSFELDKIHT--YHPNCKMILRI 134

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
                 +   L +             +  +     V G+ FH    +++   +   +K+ 
Sbjct: 135 RCDDPNATVQLGNKFGANEDEIRHLLEYAKQLDIEVIGISFHVGSGSRNPEAYYRAIKSS 194

Query: 183 EKEFGH---FITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSEKYSVQIYLEPG 234
           ++ F        +   + +GGG+H    +     Y        +K+F  + +V I  EPG
Sbjct: 195 KEAFNEAISVGHKPYILDIGGGLHADIDEGELSTYMSDYINDAIKDFFPEDTVTIVAEPG 254

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA----------------HVPDYLLYQES 278
                + + L T V+             +                     + D    +E 
Sbjct: 255 RFFAEHYSVLATQVIGKRVRDGLYEYFFNESTYGGFSNVIFEKSVPTPQLLRDVPDDEEY 314

Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                      +++ G +C   D+         + IGD + F     Y       FNG 
Sbjct: 315 ---------VPSVLYGCTCDGVDVINHNVALPELHIGDWVYFPSWGAYTNVLTTSFNGF 364


>gi|83944313|ref|ZP_00956768.1| decarboxylase, pyridoxal-dependent [Sulfitobacter sp. EE-36]
 gi|83953354|ref|ZP_00962076.1| decarboxylase, pyridoxal-dependent [Sulfitobacter sp. NAS-14.1]
 gi|83842322|gb|EAP81490.1| decarboxylase, pyridoxal-dependent [Sulfitobacter sp. NAS-14.1]
 gi|83844857|gb|EAP82739.1| decarboxylase, pyridoxal-dependent [Sulfitobacter sp. EE-36]
          Length = 392

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 52/354 (14%), Positives = 115/354 (32%), Gaps = 22/354 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++ + ++    D           ++  A+K   A  +   L +   G  ++S  E+ 
Sbjct: 34  PTLVVSRARVGVQYDALQAGLG--DARIHYAVKANPAPEIIRMLVERGSGFDAASRQEIE 91

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           L   +       ++    K     A   +    +F    +    K        ++ +R+ 
Sbjct: 92  LCLSQGADPAKISFGNTIKRGVDIAFAHSIGVTMFAADCEAELDKIAEHAPGARVYIRLI 151

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI- 182
              S + + L         L     +  +S      GL FH   + +    +  +L  + 
Sbjct: 152 VENSMADWPLTRKFGCAGSLLPSLLEYTKSVGLVPYGLSFHVGSQTRRAEYWHPVLDQVA 211

Query: 183 --EKEFGHFITQIEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEKYSVQIYL--EPGE 235
                       ++ +++GGG      D    P       +    E++     L  EPG 
Sbjct: 212 PLWHAAKEAGHDLQLLNIGGGFPAYHGDPVDAPRGYAAAVVAAVKERFGEIPVLMAEPGR 271

Query: 236 AIVTNTTTLNTTVLDISENI----KNLVIVDSSVEAHVPDY--LLYQESATIYPNTGPY- 288
            +V     +   VL +S       +  V +D    + + +      +       +  P  
Sbjct: 272 GMVAEAGHIAAEVLLVSRKSAEAARRWVYLDIGRFSGLAETEGEAIRYQFVTPHDGKPVG 331

Query: 289 TAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338
             ++ G SC + D+  E +       ++ GD++  ++   Y  +  +  FNG  
Sbjct: 332 PCVLAGPSCDSADVLYEKNPVDLPLDLRDGDKVMIKNCGAYTSSYSSVGFNGFP 385


>gi|134301242|ref|YP_001121210.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|134049019|gb|ABO46090.1| pyridoxal-depedent decarboxylase [Francisella tularensis subsp.
           tularensis WY96-3418]
          Length = 417

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 57/389 (14%), Positives = 123/389 (31%), Gaps = 35/389 (8%)

Query: 4   TPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +P ++ID+  LL            +        ++K  +   +     +        S  
Sbjct: 28  SPCFIIDENTLLERARLFQQAILNQYQNSIAAYSVKTQSLNTIIQKFYEVGFIPEVVSSD 87

Query: 62  EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           E       +              D      L     I  +   ++ +    A+KL+   K
Sbjct: 88  EFEQIQKLQLCDKSIIFNGPYKNDASFIKALQLNAMINCDHFDEILRIAKIAKKLNITAK 147

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGE----KCKDKIESEIKNVNGLMFHNNCENKSFL 173
           IGLR+  + +   +          +             +     + GL  H     +   
Sbjct: 148 IGLRVADNKTPQNWSRFGFALTDQQSNSDIFTTIDKIQQIANIQLAGLHCHIGTNIRDIS 207

Query: 174 ----CFSAMLKNIEKEFGHFITQIEWISLGGGIH-----------FTDKDYPVKDFCQRL 218
                   + +  E     +   +EWI LGGG+                 + ++ +   +
Sbjct: 208 RFTAMAKNIAELAETILTKYKLTLEWIDLGGGLAGISPTLSDKRLQPYNPFDLELYAATI 267

Query: 219 KEFSEKYSVQI------YLEPGEAIVTNTTTLNTT-VLDISENIKNLVIVDSSVEAHVPD 271
               ++Y  +         E G ++V  +  L TT V    +N     ++  +    +P 
Sbjct: 268 IAPLKEYLNKTNDKTKLIFELGRSLVDYSVALLTTIVGTREQNEDFQSLITDAGIHTIPT 327

Query: 272 YLLYQESATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
              Y+           +   ++ G SC+  D   +  F   ++ GD++  + V  YNI+R
Sbjct: 328 ISTYRHPIYHLKTDSYHKKTLLLGPSCMQHDFLHDDIFLPKLEYGDKLLIDGVGAYNISR 387

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIR-EFS 358
            N F     P++ + + +   + +R   +
Sbjct: 388 NNEFI-HLKPSVILIDKNHQYQVLRVRQT 415


>gi|238916082|ref|YP_002929599.1| diaminopimelate decarboxylase [Eubacterium eligens ATCC 27750]
 gi|238871442|gb|ACR71152.1| diaminopimelate decarboxylase [Eubacterium eligens ATCC 27750]
          Length = 412

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 59/393 (15%), Positives = 118/393 (30%), Gaps = 49/393 (12%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D  +L   +D    I    GV +  A+K      +   L++ +D     S  E
Sbjct: 15  GTPSYIFDTDELCARIDAMQQIL-GCGVTVCYAMKANPF--LISVLDKKLDKFEVCSPGE 71

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCD---TIIFNTVSQLNKFKDKAQKLHKKI 118
             +   E    E    +   K+ +                 +++QL      A +   K+
Sbjct: 72  FAICEKEGINREKIVLSGVNKEKKDILYTMKTGAVGIYTVESLNQLELINSCAVECGIKV 131

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE----NKSFLC 174
            + I                   ++ E    K E +   + G+  ++  +    ++    
Sbjct: 132 KVLIRV------TSGNQFGINERQVYEIADRKDELKGIILEGIQCYSGTQKKKLSQIEAE 185

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY--------- 225
              +             +++ I  G G+          D      +  +++         
Sbjct: 186 VVWLQAIAHTCEAEHGVELKEIEYGPGLSVDYFVTDKCDAMNTDFDELKEFAVMIKEMSE 245

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------------- 270
              + LE G  I      L + + D+  N      +  S   H+                
Sbjct: 246 KFNVTLEMGRYIAATCGILISRIADMKMNDTTRYAIIDSGINHINYYGQAMAMKKPRCEF 305

Query: 271 -DYLL------YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323
                        +      + G     +CG  C  GD+  +    K  KIGD I+F ++
Sbjct: 306 IPMEYTEGFADGVDHEVEVYSQGVQPYNICGSLCTVGDVIVKNLELKDAKIGDMIAFYNI 365

Query: 324 AGYNINRK-NWFNGINMPTIAVKNVDGTIKAIR 355
             Y++      F    MP I + ++    + +R
Sbjct: 366 GAYSVTEGIYLFLSRRMPAIVMYSMKNGYRIVR 398


>gi|212632996|ref|YP_002309521.1| Vibrioferrin biosynthesis protein PvsE [Shewanella piezotolerans
           WP3]
 gi|212554480|gb|ACJ26934.1| Vibrioferrin biosynthesis protein PvsE [Shewanella piezotolerans
           WP3]
          Length = 412

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 50/391 (12%), Positives = 108/391 (27%), Gaps = 50/391 (12%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            Y+ D ++L N+    +     +  +L  A K      +   L   +DG  ++S  E+  
Sbjct: 23  AYIYDLEQLKNHASAMMAALP-SNCQLYYAAKANPEAEVLQVLAPIVDGVEAASGGELNW 81

Query: 66  GHEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
            H+        +    K       A+  + D I   ++++L +     ++  +   + + 
Sbjct: 82  IHQCQPQVPLIFGGPGKLVSELSQAIDLDVDAIHVESLTELQRITALCRQKQRHCRILLR 141

Query: 124 PSVSYSKF--ILADPNRPFSRLGEKCKDKIESEIK-------------NVNGLMFHNNCE 168
            ++S               +  G    +   +                 + G  FH    
Sbjct: 142 MNISLEGIAETRLTMGGKPTPFGIDAAELDTAMAIVRDIPTLAGKPLVELLGFHFHLMSH 201

Query: 169 N----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKE 220
                +            +K    +   +  +++GGGI     D    +  K FC  L+ 
Sbjct: 202 QLDVGRHLALMKLYFSTYKKWCQKYSLNLPMLNVGGGIGVNYSDPQQIFDWKHFCMELET 261

Query: 221 FSEKYSVQIY---LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQ 276
             ++  ++      E G  +          VLDI +N      +      H         
Sbjct: 262 LIKQNQMEAVNIRFECGRFVTAAMGYYVMQVLDIKKNHGQWFAIGHGGTHHFRTPAAQAH 321

Query: 277 ESATIYPNTGP-------------------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDR 317
           +                                 + G+ C   D+     + + + + D 
Sbjct: 322 DHPFFVLAAKDIGIELEQAETKITTTNLKSELVTIVGQLCTPKDVLATQQYVERLAVDDY 381

Query: 318 ISFEDVAGYNINRKN-WFNGINMPTIAVKNV 347
           + F     Y  N  +  F     P       
Sbjct: 382 LVFSHAGAYAWNISHQNFLMHAPPQRFFIRE 412


>gi|23004296|ref|ZP_00047701.1| COG0019: Diaminopimelate decarboxylase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 276

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 74/266 (27%), Gaps = 21/266 (7%)

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENKSF 172
           +R+NP V           +  ++ G       E            + G+  H   +    
Sbjct: 2   IRVNPDVDALTHAKISTGKSENKFGIPIARAREVYAGAARLPGLEIVGVDAHIGSQITDL 61

Query: 173 LCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEFSEK 224
             F    + +            ++  +  GGG+                    L+     
Sbjct: 62  TPFDNAARLLCALARDLLADGHRLHHVDFGGGLGIPYRDDNAPPPDPAALAAILRPHFRP 121

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESATIYP 283
             ++   E G  I  N   L T V+ +     K  VIVD ++   +   L     A    
Sbjct: 122 LGLKPVFEIGRMIAGNAGILVTRVVYVKPTEGKTFVIVDGAMNDLIRPTLYEAFHALRPL 181

Query: 284 NTGPY-----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
           +         TA V G  C +GD          V  GD I+      Y   +   +N   
Sbjct: 182 SEPGPDTPRLTADVVGPVCESGDYLALGREMPEVSPGDLIAVMSAGAYGAVQAGTYNSRR 241

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364
           +    +   D         SY+D   
Sbjct: 242 LVPEVLVRGDQASVVRPRPSYDDLIR 267


>gi|149243762|ref|XP_001526522.1| ornithine decarboxylase [Lodderomyces elongisporus NRRL YB-4239]
 gi|146448916|gb|EDK43172.1| ornithine decarboxylase [Lodderomyces elongisporus NRRL YB-4239]
          Length = 436

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 53/367 (14%), Positives = 113/367 (30%), Gaps = 30/367 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++  ++      ++   V+   A+KC     + + L         +S  E+  
Sbjct: 68  FFVCDLNQVYKSVQLWK--QQLPRVQAHYAVKCNTNMKVVEFLADKGVNFDCASKNEIDA 125

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
             +     E   Y    K          +  +    + V++L K      +    + +  
Sbjct: 126 VLQLGVAAERIVYANPCKTNSFIRHARDNQVNLTTVDNVNELVKLSKFHPECGILVRIIT 185

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           +   S  +          + + E         +  V G+ FH     K F      +++ 
Sbjct: 186 DDESSQCRLSTKFGCSVETAVKEILPTAKNLGLP-VVGVAFHVGSGAKDFQAIYQAIRDS 244

Query: 183 EKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS-----EKYSVQIYLEPG 234
              F        +++ + +GGG  F       K     + +F      ++  +    EPG
Sbjct: 245 RIVFDYGIDLGFKMKILDIGGGFEFDTFVESSKMVNVSIDKFFPDLFVKENGISFIAEPG 304

Query: 235 EAIVTNTTTLNTTVLDISE-------NIKNLVIVDSSVEAHVPDYLLYQES--------A 279
             +V N  TL T V+   +        +     V  ++   + D+               
Sbjct: 305 RFMVANAFTLATHVIAKRDINGSAKAMLYINDGVYGNLNCILFDHQEPTARILKSGGQFH 364

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGIN 338
               +   +   + G +C   D           V +GD + F ++  Y    K  FNG  
Sbjct: 365 YGEKDQRRFEYSIWGPTCDGLDCVSASSHLNCNVAVGDWLYFPNLGAYTSCAKTQFNGFK 424

Query: 339 MPTIAVK 345
             T  + 
Sbjct: 425 NDTEVIY 431


>gi|254993002|ref|ZP_05275192.1| diaminopimelate decarboxylase [Listeria monocytogenes FSL J2-064]
          Length = 282

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 37/281 (13%), Positives = 82/281 (29%), Gaps = 32/281 (11%)

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHNNCE 168
            +R+ P +           +  S+ G    +             S   ++ GL  H   +
Sbjct: 1   LIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHIGSQ 60

Query: 169 NKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK-DFCQRLKEFSE 223
                 F    + I  +   +        + ++LGGG            +  + +++  +
Sbjct: 61  IFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQIMD 120

Query: 224 K----------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271
           +             +I++EPG ++V    T    V    E       +     +  ++  
Sbjct: 121 EVRDVANNNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDNIRP 180

Query: 272 YLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
            L       +           T  + G+ C +GD+            G+ ++      Y 
Sbjct: 181 ALYDAHYDAVLAANPEKVAEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTGAYG 240

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367
               + +N I  P +           +   +Y +   N LS
Sbjct: 241 YAMASNYNRIPRPPVVFVENGVDKLIVARETYENLVQNDLS 281


>gi|21232485|ref|NP_638402.1| diaminopimelate decarboxylase [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66767431|ref|YP_242193.1| diaminopimelate decarboxylase [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|188990536|ref|YP_001902546.1| Putative diaminopimelate decarboxylase [Xanthomonas campestris pv.
           campestris str. B100]
 gi|21114272|gb|AAM42326.1| diaminopimelate decarboxylase [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66572763|gb|AAY48173.1| diaminopimelate decarboxylase [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167732296|emb|CAP50488.1| Putative diaminopimelate decarboxylase [Xanthomonas campestris pv.
           campestris]
          Length = 427

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 53/358 (14%), Positives = 106/358 (29%), Gaps = 33/358 (9%)

Query: 21  ALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGGETHAY-NV 79
            +  +   G  L  A K  A   +  TL  Y+DG  ++S  E+   H++       +   
Sbjct: 41  WMRAQLPPGCTLFYAAKANAEPQILQTLAPYVDGFEAASGGELAWLHQQQPDAALLFGGP 100

Query: 80  AYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIG------LRINPSVSYSKFI 132
              + E+   +   D  +   ++ +L +    A+++ +         LR+N +V  ++  
Sbjct: 101 GKLESELAQAVRLPDCTVHVESLGELQRLAAIARQIAQPDRRRIPVFLRMNIAVPGAQTT 160

Query: 133 LADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKSFLCFSAMLKNI--- 182
                   S  G    D   + ++        + G  FH     +       ++      
Sbjct: 161 RLMMGGQPSPFGLDPDDLDAALLQLRASPALELRGFHFHLMSHQRDAAAQLHLIAAYLRT 220

Query: 183 -EKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSV--QIYLEPGE 235
            +            ++ GGG           +    FC  L      +    Q+ LEPG 
Sbjct: 221 VQHWRQRHGLGPLLVNAGGGFGVDYLTPEASFDWAGFCAGLPAVLHAHGDGLQLRLEPGR 280

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPNTG------PY 288
            +  +       VLDI  +      +      H         +   +             
Sbjct: 281 YVSASCGWYLMEVLDIKRSHGAWFAIARGGTHHFRTPAAQGHDHPCVVVRGTHAPVLRDT 340

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIAVK 345
              + G+ C   D+         +  GD ++F     Y  N  +  F     P +   
Sbjct: 341 PVTLVGQLCTPKDVLARNQRVAALAPGDCLAFPLAGAYAWNISHQQFLMHPPPQMVFL 398


>gi|308446000|ref|XP_003087071.1| hypothetical protein CRE_26049 [Caenorhabditis remanei]
 gi|308263085|gb|EFP07038.1| hypothetical protein CRE_26049 [Caenorhabditis remanei]
          Length = 318

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 53/313 (16%), Positives = 104/313 (33%), Gaps = 23/313 (7%)

Query: 21  ALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH-EKFGGETHAYNV 79
                     ++  A+K  +   + + L +   G    +  E+              ++ 
Sbjct: 1   MDQAFSFIDHQICFAVKSNSNLAVLNVLAKLGSGFDIVTGGELARVLAAGGDATKIVFSG 60

Query: 80  -AYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGLRINPSVSYSKFILAD 135
              ++ +   A+          + ++L++ +  A  L     I LR+NP V         
Sbjct: 61  LGKQEADIQKALEVGIACFNVESHAELDRIQKVAAGLGKKAPISLRVNPDVDAKTHPYIS 120

Query: 136 PNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKSFLCFSAMLKNIEKEFG- 187
                ++ G       E+          +V G+  H   +      F   L  +      
Sbjct: 121 TGLKENKFGIPSDSVFETYQYAASLPNLDVIGIDCHIGSQLTETQPFVDALDRVIMMIAK 180

Query: 188 --HFITQIEWISLGGGIHFTDKDYPVK---DFCQRLKEFSEKYSVQIYLEPGEAIVTNTT 242
                 Q++ I +GGG+  T KD       ++   ++   EK  +++Y+EPG +I  N  
Sbjct: 181 LKELGIQLKHIDIGGGLGVTYKDETPPSVAEYANAMRPALEKLGLKVYMEPGRSISANAG 240

Query: 243 TLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSC 297
            L T V L    N +N  I+D+++   +   L              +    T  + G  C
Sbjct: 241 VLVTKVDLLKPTNYRNFAIIDAAMNDLIRPSLYQAWMDIQAVVSRTDVEAKTWDIVGAIC 300

Query: 298 LAGDIFGEFHFEK 310
             GD  G+     
Sbjct: 301 ETGDFLGKERELA 313


>gi|271969560|ref|YP_003343756.1| Orn/DAP/Arg decarboxylase 2 [Streptosporangium roseum DSM 43021]
 gi|270512735|gb|ACZ91013.1| Orn/DAP/Arg decarboxylase 2 [Streptosporangium roseum DSM 43021]
          Length = 392

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/346 (15%), Positives = 98/346 (28%), Gaps = 20/346 (5%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y+ D   L  +           G++L  A+K      +   L +++DG   SS  E+ 
Sbjct: 52  PAYVYDLASLDEHAAAVRAAL--PGIELYYAVKANPDPELLRVLARHVDGFEVSSGGELA 109

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                F G   A     K             +   +  +L +    A      + LR+N 
Sbjct: 110 HVRGLFPGARVALGGPGKTDAELFGDVTRLHV--ESPGELRRL--LASGRRADVLLRVNL 165

Query: 125 SVS------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
            V                      + E        +   + G+  H     ++       
Sbjct: 166 DVPVAGASLAMGGGATPFGMDPGGIAECVALLSGQDAVRLRGIHAHLASGLEAPALLELA 225

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ---IYLEPGE 235
              +E         +  I+LGGG+  +      +       E   +       + +EPG 
Sbjct: 226 AAVLEYARE---LGVTEINLGGGMAVSYAAPDARFDWHSYGEGLARLRRPGEVLRIEPGR 282

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGR 295
           A+        T V+D+      L  V +    H+        S  +          + G+
Sbjct: 283 ALTVYCGRYVTRVIDVKRVHGELFAVVAGGTHHLRTPATKGHSQPLAALPPGEPVTIVGQ 342

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGINMP 340
            C   D+         +  GD + F     Y  N  +  F     P
Sbjct: 343 LCTPKDVLAHRV-PVRLAAGDIVEFTMAGAYAWNISHHDFLMHPKP 387


>gi|116317805|emb|CAH65842.1| OSIGBa0147B06.1 [Oryza sativa Indica Group]
          Length = 410

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 50/354 (14%), Positives = 91/354 (25%), Gaps = 20/354 (5%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           ++++D  K+++            GV+   A+KC     +   L     G   +S  E+  
Sbjct: 52  FHVLDLAKVVDLYAGWRRAL--PGVRPFYAVKCNPDTALLGALAALGAGFDCASRAEIEA 109

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN- 123
                       Y    K     A  +    +   T     +     +       L    
Sbjct: 110 VLALGVPPAAIVYANPCKPGAHVAFAAEAG-VNVTTYDSEEEVAKVKRCHPSCELLLRIK 168

Query: 124 -PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
            P     K  L                        V G+ FH          +   ++  
Sbjct: 169 APDCGGVKVDLGLKYGANPDEVLPLLRAARRAGLGVAGVSFHVGSGASRAAVYRGAIEAA 228

Query: 183 EKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFCQ-RLKEFSEKYSV--QIYLEPGE 235
              F       +  +  + +GGG                 L  +        ++  EPG 
Sbjct: 229 RAAFDAAAGLGMPPMRVLDIGGGFVAGAAFGDAAAVINRALGRYFGDLLPTVEVIGEPGR 288

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGPYTA 290
                  TL   V+                   S+   + D  + +         G  T 
Sbjct: 289 YFAETAFTLAARVIGKRRRGDVREYWIDDGVYGSLNCILLDSYVPRPRPLAGARPGEETH 348

Query: 291 --MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
              V G +C + D     +    + + D + F+D+  Y     + FNG     I
Sbjct: 349 ASTVFGPTCDSIDTVVTGYQLPEMSVDDWLVFDDMGAYTTAAGSSFNGFATSAI 402


>gi|313637136|gb|EFS02677.1| diaminopimelate decarboxylase [Listeria seeligeri FSL S4-171]
          Length = 293

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 38/281 (13%), Positives = 82/281 (29%), Gaps = 32/281 (11%)

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHNNCE 168
            +R+ P +           +  S+ G    +             S   ++ GL  H   +
Sbjct: 12  LIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEAAIKQVLHASAAFDLIGLHCHIGSQ 71

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK-DFCQRLKEFSE 223
                 F      ++  + +         + ++LGGG            +  + +++  E
Sbjct: 72  IFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQIME 131

Query: 224 KYS----------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPD 271
           +             +I++EPG ++V    T    V    E       V     +  ++  
Sbjct: 132 EVRDVANANDIAIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYVAVDGGMSDNIRP 191

Query: 272 YLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
            L       +           T  + G+ C +GD+            G+ ++      Y 
Sbjct: 192 ALYDAHYDAVLAANPEKVPEETVAIAGKCCESGDMLIWDLPLPKSNAGEILAVFCTGAYG 251

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367
               + +N I  P +           +   +Y +   N LS
Sbjct: 252 YAMASNYNRIPRPPVVFVEDGVDKLVVARETYENLVQNDLS 292


>gi|303275556|ref|XP_003057072.1| adenosylmethionine/pyridoxal dependant decarboxylase fusion protein
           [Micromonas pusilla CCMP1545]
 gi|226461424|gb|EEH58717.1| adenosylmethionine/pyridoxal dependant decarboxylase fusion protein
           [Micromonas pusilla CCMP1545]
          Length = 1019

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 59/397 (14%), Positives = 107/397 (26%), Gaps = 69/397 (17%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           + ++D   +               V+   A+KC     +  TL         +S  EV  
Sbjct: 604 FLVVDLGVVTRRWHYWRATLPR--VQPHYAVKCNMDTRVLATLAALGSSFDCASPTEVDA 661

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                   +   Y    K     A ++        F++V +L K    A ++   + LR 
Sbjct: 662 VISLGVSPDRIIYANPCKLPRHLAAVAGSGVSLTTFDSVGELEKISALAPEMKVLLRLR- 720

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
                    +            +   +  +    NVNG+ FH      + L F   L+  
Sbjct: 721 ADDPDARCVLGNKY-GAEPAEVKVLLEAAKRLGVNVNGVSFHVGSGATNPLAFREALEFA 779

Query: 183 EKEFGH----FITQIEWISLGGGIHFTDKDYPVKD-------------FCQRLKEFSEKY 225
              F       +  +E + +GGG   + K     +                  + F E  
Sbjct: 780 RVAFDAAKELGLPPMEVLDIGGGFSGSIKADDASNDDDVTLAAVAGEVNKSLERLFPEAE 839

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDIS--------------------------ENIKNLV 259
            V++  EPG        TL   +                                   + 
Sbjct: 840 GVRVISEPGRYFAEACVTLACMIFSRRIRSTEDGSLAPGEDSHQYFVSDGLYGMMNSIMY 899

Query: 260 IVDSSVEAHVP-----------------DYLLYQESATIYPNTGPYTAM--VCGRSCLAG 300
              +     +P                    +Y     +  N+   T    V G +C   
Sbjct: 900 DHATVNSRLLPVATNAAALAAGNVDAVIPANVYAGDDAVVGNSRAKTYPSTVFGPTCDGL 959

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
           D   E      + +GD + F  +  Y ++  + FNG 
Sbjct: 960 DKIHEQTAMPELTVGDWLVFPHMGAYTVSAGSNFNGF 996


>gi|322789437|gb|EFZ14734.1| hypothetical protein SINV_02675 [Solenopsis invicta]
          Length = 402

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 52/370 (14%), Positives = 121/370 (32%), Gaps = 23/370 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   ++      +   K   V    A+K      +   L         +S  E+  
Sbjct: 35  FYIADIGNVIKKHQEWIT--KLPRVIPHFAIKANPDPTVIKVLAALNSCFDCASKQEIKQ 92

Query: 66  GHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
             +    G+   +     Y      A   N   +  ++ S+L K KD   +    I +R 
Sbjct: 93  VMQHGVHGDRIIFAHPTKYPSHIEYAKEVNVKQMTVDSESELFKIKDIFPEAKIIIRIRC 152

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF----SAM 178
           +     +K +        +    +     +    N+ G  FH  C  K +  +    +  
Sbjct: 153 DAKYIGAKSLGLKFGTQSNEETVRLIQLTKDLGLNLYGFSFHVGCLCKEYEAYSRGIAMC 212

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS--VQIYLEPGEA 236
            + I         +++ I +GGG         + +    + +  +     +++  EPG  
Sbjct: 213 KELIIASKAIGFDKVQLIDIGGGFEGK-SGMNIDEVANVINDAIQDLDSSIRVISEPGTY 271

Query: 237 IVTNTTTLNTTVLDISE------NIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTG 286
            V+++ TL T +            ++   +      + + + L  Q           +  
Sbjct: 272 YVSSSFTLATYLHSKRIIPNKGEMMRMYYMNCGVFHSFIDELLGIQARLPQSLSEPISKE 331

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA-VK 345
            + + + G +  + D+  +        IGD + + ++  Y+I     FNG  +P +    
Sbjct: 332 KFLSSIWGPTADSYDLIVKDAMLPEFYIGDWLIWTNMGAYSIAIACPFNGFPIPVVIPFI 391

Query: 346 NVDGTIKAIR 355
                +  ++
Sbjct: 392 RKSQLLVLVK 401


>gi|89257094|ref|YP_514456.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           holarctica LVS]
 gi|115315451|ref|YP_764174.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           holarctica OSU18]
 gi|156503308|ref|YP_001429373.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|167009486|ref|ZP_02274417.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           holarctica FSC200]
 gi|254368329|ref|ZP_04984347.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           holarctica 257]
 gi|254368961|ref|ZP_04984974.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           holarctica FSC022]
 gi|290952985|ref|ZP_06557606.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295313805|ref|ZP_06804378.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           holarctica URFT1]
 gi|89144925|emb|CAJ80273.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           holarctica LVS]
 gi|115130350|gb|ABI83537.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134254137|gb|EBA53231.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           holarctica 257]
 gi|156253911|gb|ABU62417.1| pyridoxal-depedent decarboxylase [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|157121882|gb|EDO66052.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 417

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 57/389 (14%), Positives = 124/389 (31%), Gaps = 35/389 (8%)

Query: 4   TPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +P ++ID+  LL            +        ++K  +   +     +        S  
Sbjct: 28  SPCFIIDENALLERARLFQQAILNQYQNSIAAYSVKTQSLNTIIQKFYEVGFIPEVVSSD 87

Query: 62  EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           E       +              D  +   L     I  +   ++ +    A+KL+   K
Sbjct: 88  EFEQIQKLQLCDKSIIFNGPYKNDASLIKALQLNAMINCDHFDEILRIAKIAKKLNITAK 147

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGE----KCKDKIESEIKNVNGLMFHNNCENKSFL 173
           IGLR+  + +   +          +             +     + GL  H     +   
Sbjct: 148 IGLRVADNKTPQNWSRFGFALTDQQSNSDIFTTIDKIQQIANIQLAGLHCHIGTNIRDIS 207

Query: 174 ----CFSAMLKNIEKEFGHFITQIEWISLGGGIH-----------FTDKDYPVKDFCQRL 218
                   + +  E     +   +EWI LGGG+                 + ++ +   +
Sbjct: 208 RFTAMAKNIAELAETILTKYKLTLEWIDLGGGLAGISPTLSDKRLQPYNPFDLELYAATI 267

Query: 219 KEFSEKYSVQI------YLEPGEAIVTNTTTLNTT-VLDISENIKNLVIVDSSVEAHVPD 271
               ++Y  +         E G ++V  +  L TT V    +N     ++  +    +P 
Sbjct: 268 IVPLKEYLNKTNDKTKLIFELGRSLVDYSVALLTTIVGTREQNEDFQSLITDAGIHTIPT 327

Query: 272 YLLYQESATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
              Y+           +   ++ G SC+  D   +  F   ++ GD++  + V  YNI+R
Sbjct: 328 ISTYRHPIYHLKTDSYHKKTLLLGPSCMQHDFLHDDIFLPKLEYGDKLLIDGVGAYNISR 387

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIR-EFS 358
            N F     P++ + + +   + +R   +
Sbjct: 388 NNEFI-HLKPSVILIDKNHQYQVLRVRQT 415


>gi|307323622|ref|ZP_07602832.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces violaceusniger Tu 4113]
 gi|306891111|gb|EFN22087.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces violaceusniger Tu 4113]
          Length = 464

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 61/396 (15%), Positives = 117/396 (29%), Gaps = 42/396 (10%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE-VMLGH 67
           +D   +  ++        +A V    A K  +   +   L +   G   +S  E      
Sbjct: 40  VDADGVQESVRDLHRAFGDAPVLHTFAAKAASLVPVLRLLARSGMGCEVASPGELAQAVA 99

Query: 68  EKFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGLRINP 124
             F  E     + A    E+   L+    +  +  +++++  D     +    +GLRINP
Sbjct: 100 AGFPPERIVLDSPAKTPAELAHALALGVAVNADNFAEVDRIGDLLAVHESSSVLGLRINP 159

Query: 125 SVSYSKFILADPNRPFSRLGEKCKD--KIES------EIKNVNGLMFHNNCENKSFL--- 173
            V            P S+ G   +D    +       E   +  L  H   +  S     
Sbjct: 160 QVGAGAIDAMSTASPSSKFGVPLRDPGARQRVLDTFTERPWLTRLHVHVGSQGCSLDLIG 219

Query: 174 -CFSAMLKNIEKEFGHFITQ-IEWISLGGGIH---------FTDKDYPVKDFCQRLKEFS 222
               A  +  E+       Q +  + +GGG+           T + Y  +         +
Sbjct: 220 EGVRATFELAEEINAAAGRQQVTSLDIGGGLPVNFDDDEIRPTYETYVRQLRAAVPGLLT 279

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA------HVPDYLLYQ 276
            +Y   +  E G ++V         V    +     + +  +          +PD    +
Sbjct: 280 GRY--DLVTEFGRSLVAKNGFTAAVVEYTKDTGGRRIALTHAGAHIATRTVFMPDAWPLR 337

Query: 277 ESATIYPNTGPYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
            +         +       V G  C AGD+         +  GD +   D  GY  +   
Sbjct: 338 IAVYDRDGRPKHAPERVQDVAGPCCFAGDLVARERTLPELAPGDIVVLLDTGGYYFSTPW 397

Query: 333 WFNGINMPTIAVKNVDGTIK----AIREFSYNDYYN 364
            +N +  P +      G         RE +  +   
Sbjct: 398 SYNSLARPAVHGFTTHGPDLRFATVRREQTLAEILA 433


>gi|146413553|ref|XP_001482747.1| hypothetical protein PGUG_04702 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 432

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 50/377 (13%), Positives = 107/377 (28%), Gaps = 35/377 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++ N       ++   V+   A+KC     + + L +       +S  E+  
Sbjct: 59  FFVADIGAVVRNYRLWQ--QELPQVQPHYAVKCNTDMRVIEALARMGCNFDCASKTEIDQ 116

Query: 66  G-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                       Y    K             +    + V +L K K    +    I +  
Sbjct: 117 VLLLGVDPGRIVYANPCKTNSYVRHAKDVGVNLTTVDNVHELQKIKRFHPECGILIRIMT 176

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           +   +  +          + + E      +     V G+ FH              +++ 
Sbjct: 177 DDESAQCRLSTKFGCSVKTAVEELFP-LAKELNLRVRGVAFHVGLGATDLDSIYKAVQDS 235

Query: 183 EKEFGHFITQIEWISLG-GGIHFTDKDYPVKDFCQRLKEFSEK---------YSVQIYLE 232
              F   I Q  +  +    I    ++    +    ++   +K         + V+   E
Sbjct: 236 RILFDCGIDQFGFKEMNLLDIGGGFQELTFGESSAMVRMSLDKFFSSAYRELHPVEFIAE 295

Query: 233 PGEAIVTNTTTLNTTVLD----------ISENIKNLVIVDSSVEAHVPDYL--------L 274
           PG  +V N  TL   V+           +   +     V  ++   + D+          
Sbjct: 296 PGRFMVANAFTLAVHVIARRDVREAESEVQAMLYVNDGVYGNLNCILFDHQVPLASLLTH 355

Query: 275 YQESATIYPNTGPYTAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
             +           +  + G +C   D   G+      V++GD + F ++  Y       
Sbjct: 356 KGQFVYGSEPDPELSFSIWGPTCDGLDCISGKCQLAFNVEVGDWLYFPNLGAYTSAATTS 415

Query: 334 FNGINMPTIAVKNVDGT 350
           FNG       V      
Sbjct: 416 FNGFKGTAEVVYVNSEK 432


>gi|218781864|ref|YP_002433182.1| diaminopimelate decarboxylase [Desulfatibacillum alkenivorans
           AK-01]
 gi|218763248|gb|ACL05714.1| Diaminopimelate decarboxylase [Desulfatibacillum alkenivorans
           AK-01]
          Length = 402

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 45/365 (12%), Positives = 111/365 (30%), Gaps = 22/365 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYM-DGTTSSSL 60
            TP +     ++  NL+            ++  A+K      +   + +    G    S 
Sbjct: 37  GTPAFFYSANRISQNLERLQEALSQLDSYQIYYAIKANRFAPILTHIKKTGLCGVDICSP 96

Query: 61  YEVMLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKK 117
            E++      F     +Y   A  + E+  +  N D  +  +++S + +           
Sbjct: 97  NELLHAFSCGFTCSEISYTAHAMTNDELRLLADNPDVRLNCDSLSTIRRLGQFCSHRKIG 156

Query: 118 IGLRINPSVSYSKFILADPNR-PFSRLGEKCKDKIESEIKN------VNGLMFHNNCENK 170
           I +     + Y        +    ++ G   +   E+          V+ + FH  C   
Sbjct: 157 IRVNPAMGIGYRDSETLRYSGDKTTKFGVYREQFEEALALASKHGLIVDTIHFHTGCGYL 216

Query: 171 SFLCFSAMLKNIE-KEFGHFITQIEWISLGGGIHFTDKDYPVK----DFCQRLKEFSEKY 225
           +               F   +  +  ++LGGG+     +  V      +   + +     
Sbjct: 217 NNQLSIFDEILEATHWFTDKVKDLASVNLGGGLGVPHDEDDVNLDLDSWVSVINKHYGGK 276

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLYQESATIYPN 284
            + + +EPG+ +V ++  L   V  +    +   I  +      +           +   
Sbjct: 277 GLTVCVEPGDYVVKDSGILILEVNTVERKQQTDFIGVNGGFNLAIEPAFYGLPCEPVVLE 336

Query: 285 TGP---YTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMP 340
                     + G    + D++ +       +K GD ++F +  GY  +  +        
Sbjct: 337 QKTDTLKPVTIAGNINESLDVWKDNFPMPDQIKEGDLLAFINAGGYASSMMSNHCMRGQV 396

Query: 341 TIAVK 345
           +  + 
Sbjct: 397 SENIV 401


>gi|16124615|ref|NP_419179.1| ornithine decarboxylase [Caulobacter crescentus CB15]
 gi|221233304|ref|YP_002515740.1| ornithine decarboxylase [Caulobacter crescentus NA1000]
 gi|13421513|gb|AAK22347.1| ornithine decarboxylase, putative [Caulobacter crescentus CB15]
 gi|220962476|gb|ACL93832.1| ornithine decarboxylase [Caulobacter crescentus NA1000]
          Length = 419

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 50/371 (13%), Positives = 103/371 (27%), Gaps = 32/371 (8%)

Query: 20  TALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAYN 78
            A + +      +  A+K   +  +   L +        +SL EV L   +  G   A+ 
Sbjct: 31  AARWFQSEFKGDVFYAVKANPSPWVIRELAKAGVRSFDVASLNEVELVANEAPGSRMAFM 90

Query: 79  VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGLRINPSVSYSKFILADP 136
              K     +       +   +     +      A    K + L +   V       +  
Sbjct: 91  HPVKSRAAISAAYFDHGVKTFSFDTHEELAKILDATGQAKDLNLIVRMGVQAEGAAYSLS 150

Query: 137 NRPFSRL--GEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIE 194
            +    +              +++ G+ FH   +      F A +    +         +
Sbjct: 151 GKFGVEMHNAPDLLLAARRATQDLMGVSFHVGSQCMRPTAFQAAMAQASRALVRAGVLAD 210

Query: 195 WISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254
            + +GGG           D  + L      ++  +  E  E        L      +   
Sbjct: 211 VVDVGGGFPSIYPGMVPPDLSEYLAAIDRGFAEMMVHETTELWCEPGRALVAEASSLLVK 270

Query: 255 IKNLVIVDSSVEA----------HV---PDYLLYQESATIYPNTGPYTAMVCGRSCLAGD 301
           ++        +            H+       LY++S  +    G       G +C + D
Sbjct: 271 VELKKGDALYLNDGSYGSLFDAAHMKWPFPVKLYRKSGEVVE-EGLKPFRFYGPTCDSVD 329

Query: 302 IF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI-----------NMPTIAVKNVDG 349
              G F+  + V  GD I    +  Y +     FNG             M ++       
Sbjct: 330 HMPGPFYLPESVDEGDYIEIGMLGAYGVAMNTRFNGFGETDTAQVQDAPMASMYGL-AKR 388

Query: 350 TIKAIREFSYN 360
           +I  +R+ +  
Sbjct: 389 SIPVVRQETEE 399


>gi|330800165|ref|XP_003288109.1| hypothetical protein DICPUDRAFT_152297 [Dictyostelium purpureum]
 gi|325081870|gb|EGC35371.1| hypothetical protein DICPUDRAFT_152297 [Dictyostelium purpureum]
          Length = 429

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 52/393 (13%), Positives = 114/393 (29%), Gaps = 41/393 (10%)

Query: 7   YL--IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           Y+   +  +       A    K        A+KC     +     +   G   +S  E+ 
Sbjct: 34  YVMMYNLDEFRALAKEACDNLKGLQTM---AVKCNPVMNLMKEAIKCGLGAEVASFGELK 90

Query: 65  LG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI---- 118
           +     F      ++   K         N    I  +   +L   ++      ++     
Sbjct: 91  IAERAGFEPSKIIFDSPIKTRRELEYALNIGCVINVDNFEELETIEEIVSTFTQEKKDSL 150

Query: 119 --GLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-----ESEIKNVNGLMFHNNCENKS 171
             G+RINP V            P S+ G   + K          K + G+  H   +   
Sbjct: 151 VLGIRINPQVDAGTLTDLSTGVPTSKFGIGIQHKDKIIDAYRRNKWLKGVHIHIGSQGFE 210

Query: 172 FLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY-------PVKDFCQRLKE 220
                     +++  ++       QI + ++GGG+                 +  + +  
Sbjct: 211 IDSISSAAVKVMELTKEINTLLNKQITFFNMGGGLSVNFDTEQSKPTFTDYANHLKSILP 270

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHVPDYLLYQES- 278
                   +  E G +       + + +     +    + +  S    H+     +    
Sbjct: 271 ELFNGDFLLITEFGRSYWAKCGVVISNIEYTKSSGDRAIAVCHSGANMHIRTVYQFPLWK 330

Query: 279 --------ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                     I  +       + G  C A D+  +     P+  G+ +   D   Y I+ 
Sbjct: 331 LRVTIFDKNGIRKHGDERMTDIAGPCCFAADVLVKERMLPPILRGEYVMVHDCGAYMISA 390

Query: 331 KNWFNGINMPTIAVKNVD-GTIKAIRE-FSYND 361
            + +N    P I   +V+   I+ I++  +  +
Sbjct: 391 YSHYNLRLAPPIYSFDVNTKKIELIKKGETIEE 423


>gi|227498071|ref|ZP_03928244.1| diaminopimelate decarboxylase [Actinomyces urogenitalis DSM 15434]
 gi|226832509|gb|EEH64892.1| diaminopimelate decarboxylase [Actinomyces urogenitalis DSM 15434]
          Length = 411

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 55/396 (13%), Positives = 112/396 (28%), Gaps = 60/396 (15%)

Query: 29  GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML---GHEKFGGETHA--------Y 77
           G     A K F    +   + Q   G  ++S  E+ +     ++  G            +
Sbjct: 13  GGTAFYAGKAFLTTAVGQMVLQEGMGIDTASRIELAVGLSALQEVDGVEAVDRAGRLGLH 72

Query: 78  NVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHKK----------IGLRINPSV 126
             A    EI  A+      ++ ++  +++      + L +           + +R+   V
Sbjct: 73  GNAKTQAEIAVALAHRVGHLVLDSREEVDLAAAAVRGLREAGTYGPEETGAVMVRLTTGV 132

Query: 127 SYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
                          + G         E     I +   +++GL  H   +      F  
Sbjct: 133 HAGGHEYIATAHEDQKFGLSVTTGAAREAIDAIIAAPELSLHGLHSHIGSQIMDLAGFRE 192

Query: 178 MLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF------------CQRLKEF 221
             +       +         E + LGGG                          + L   
Sbjct: 193 AARVVLTLRHEVARDTGILAEEVDLGGGYGIAYTVADPVPPSPAQVARVLADTVRSLCTE 252

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI------KNLVIVDSSVEAHVPDYLLY 275
                  + +EPG ++V  +T     V  +          +  V VD  +  ++   L  
Sbjct: 253 LGDSVPHVSVEPGRSVVGPSTLTLYAVTGLKRVELGEGASRLYVSVDGGMSDNIRPALYD 312

Query: 276 QESATIYPNTGPYTA------MVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNI 328
                +  N  P  A       V G+ C +GD+          + +GD ++      Y  
Sbjct: 313 AAYTALVANRLPDPAAGLVRSRVVGKHCESGDVVVRDVDLPADLAVGDVLAVPATGAYGR 372

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +  + +N    P +A  +       +R  +  D   
Sbjct: 373 SMASNYNLFTRPGVAWVHEGEQGWLLRPETVEDLLR 408


>gi|322504420|emb|CAM37403.2| putative ornithine decarboxylase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 636

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 54/397 (13%), Positives = 112/397 (28%), Gaps = 68/397 (17%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y+ID  +++  +    +  +   V+   A+K      + + L     G   +S  E+ 
Sbjct: 231 PFYIIDLGRVVEQMARWRH--ELPMVRPYFAVKSNPQLALLEVLGALGSGFDCASKGEIQ 288

Query: 65  LGHE----KFGGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
              +        +    N   +  ++          +  + + ++ K          +  
Sbjct: 289 TVLDNHLVASPDDIIFANPCKQPGDMREAQARGVTYVTVDNLLEIEKISRL--MPSARAV 346

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +RI  + S +K   +          E           +V G+ FH    N     + + +
Sbjct: 347 IRIKTNDSKAKCAFSTKFGVPLNDVESLLQAARQFKVDVYGVSFHVGSSNSDPATYVSAV 406

Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEFSEKYS----V 227
           ++    F     +      + +GGG    + +        +D  + ++   E+      V
Sbjct: 407 RDAYHVFQQASQYGFNCTLLDIGGGFPSVETNTASGEATFEDIARAIRPVLEELFGGGDV 466

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH----VPDYLLYQES----- 278
            I  EPG     +T  L   V    +   + V   SS        + +   YQ       
Sbjct: 467 TIISEPGRYFTASTHALLVNVFASRKLRMSDVEKASSQALQSVVPMDEPEEYQYYVNDGL 526

Query: 279 ---ATIYPNTGPYT-----------------------------------AMVCGRSCLAG 300
                       +                                      + G +C + 
Sbjct: 527 YHSFNCIIFDHAHPTLLLLNDGDGADAVEGNKEEGETSLSSRTRRPLRITTIFGPTCDSL 586

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
           D          +K+GD I   D+  Y       FNG 
Sbjct: 587 DCILRKQPFPEMKLGDWILVPDMGSYTTAAAAPFNGF 623


>gi|154333647|ref|XP_001563080.1| ornithine decarboxylase [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 636

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 54/397 (13%), Positives = 112/397 (28%), Gaps = 68/397 (17%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y+ID  +++  +    +  +   V+   A+K      + + L     G   +S  E+ 
Sbjct: 231 PFYIIDLGRVVEQMARWRH--ELPMVRPYFAVKSNPQLALLEVLGALGSGFDCASKGEIQ 288

Query: 65  LGHE----KFGGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
              +        +    N   +  ++          +  + + ++ K          +  
Sbjct: 289 TVLDNHLVASPDDIIFANPCKQPGDMREAQARGVTYVTVDNLLEIEKISRL--MPSARAV 346

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +RI  + S +K   +          E           +V G+ FH    N     + + +
Sbjct: 347 IRIKTNDSKAKCAFSTKFGVPLNDVESLLQAARQFKVDVYGVSFHVGSSNSDPATYVSAV 406

Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEFSEKYS----V 227
           ++    F     +      + +GGG    + +        +D  + ++   E+      V
Sbjct: 407 RDAYHVFQQASQYGFNCTLLDIGGGFPSVETNTASGEATFEDIARAIRPVLEELFGGGDV 466

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH----VPDYLLYQES----- 278
            I  EPG     +T  L   V    +   + V   SS        + +   YQ       
Sbjct: 467 TIISEPGRYFTASTHALLVNVFASRKLRMSDVEKASSQALQSVVPMDEPEEYQYYVNDGL 526

Query: 279 ---ATIYPNTGPYT-----------------------------------AMVCGRSCLAG 300
                       +                                      + G +C + 
Sbjct: 527 YHSFNCIIFDHAHPTLLLLNDGDGADAVEGNKEEGETSLSSRTRRPLRITTIFGPTCDSL 586

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
           D          +K+GD I   D+  Y       FNG 
Sbjct: 587 DCILRKQPFPEMKLGDWILVPDMGSYTTAAAAPFNGF 623


>gi|187930984|ref|YP_001890968.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|187711893|gb|ACD30190.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 417

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 57/389 (14%), Positives = 124/389 (31%), Gaps = 35/389 (8%)

Query: 4   TPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +P ++ID+  LL            +        ++K  +   +     +        S  
Sbjct: 28  SPCFIIDENALLERARLFQQAILNQYQNSIAAYSVKTQSLNTIIQKFYEVGFIPEVVSSD 87

Query: 62  EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           E       +              D  +   L     I  +   ++ +    A+KL+   K
Sbjct: 88  EFEQIQKLQLCDKSIIFNGPYKNDASLIKALQLNAMINCDHFDEILRIAKIAKKLNITAK 147

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGE----KCKDKIESEIKNVNGLMFHNNCENKSFL 173
           IGLR+  + +   +          +             +     + GL  H     +   
Sbjct: 148 IGLRVADNKTPQNWSRFGFALTDQQSNSDIFTTIDKIQQIANIQLAGLHCHIGTNIRDIS 207

Query: 174 ----CFSAMLKNIEKEFGHFITQIEWISLGGGIH-----------FTDKDYPVKDFCQRL 218
                   + +  E     +   +EWI LGGG+                 + ++ +   +
Sbjct: 208 RFTAMAKNIAELAETILTKYKLTLEWIDLGGGLAGISPTLSDKRLQPYNPFDLELYAATI 267

Query: 219 KEFSEKYSVQI------YLEPGEAIVTNTTTLNTT-VLDISENIKNLVIVDSSVEAHVPD 271
               ++Y  +         E G ++V  +  L TT V    +N     ++  +    +P 
Sbjct: 268 IAPLKEYLNKTNDKTKLIFELGRSLVDYSVALLTTIVGTREQNEDFQSLITDAGIHTIPT 327

Query: 272 YLLYQESATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
              Y+           +   ++ G SC+  D   +  F   ++ GD++  + V  YNI+R
Sbjct: 328 ISTYRHPIYHLKTDSYHKKTLLLGPSCMQHDFLHDDIFLPKLEYGDKLLIDGVGAYNISR 387

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIR-EFS 358
            N F     P++ + + +   + +R   +
Sbjct: 388 NNEFI-HLKPSVILIDKNHQYQVLRVRQT 415


>gi|54113955|gb|AAV29611.1| NT02FT1732 [synthetic construct]
          Length = 417

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 57/389 (14%), Positives = 124/389 (31%), Gaps = 35/389 (8%)

Query: 4   TPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +P ++ID+  LL            +        ++K  +   +     +        S  
Sbjct: 28  SPCFIIDENALLERARLFQQAILNQYQNSIAAYSVKTQSLNTIIQKFYEVGFIPEVVSSD 87

Query: 62  EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           E       +              D  +   L     I  +   ++ +    A+KL+   K
Sbjct: 88  EFEQIQKLQLCDKSIIFNGPYKNDASLIKALQLNAMINCDHFDEILRIAKIAKKLNITAK 147

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGE----KCKDKIESEIKNVNGLMFHNNCENKSFL 173
           IGLR+  + +   +          +             +     + GL  H     +   
Sbjct: 148 IGLRVADNKTPQNWSRFGFALTDQQSNSDIFTTIDKIQQIANIQLAGLHCHIGTNIRDIS 207

Query: 174 ----CFSAMLKNIEKEFGHFITQIEWISLGGGIH-----------FTDKDYPVKDFCQRL 218
                   + +  E     +   +EWI LGGG+                 + ++ +   +
Sbjct: 208 RFTAMAKNIAELAETILTKYKLTLEWIDLGGGLAGISPTLSDKRLQPYNPFDLELYAATI 267

Query: 219 KEFSEKYSVQI------YLEPGEAIVTNTTTLNTT-VLDISENIKNLVIVDSSVEAHVPD 271
               ++Y  +         E G ++V  +  L TT V    +N     ++  +    +P 
Sbjct: 268 IAPLKEYLNKTNDKTKLIFELGRSLVDYSVALLTTIVGTREQNEDFQSLITDAGIHTIPT 327

Query: 272 YLLYQESATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
              Y+           +   ++ G SC+  D   +  F   ++ GD++  + V  YNI+R
Sbjct: 328 ISTYRHPIYHLKTDSYHKKTLLLGPSCMQHDFLHDDIFLPKLEYGDKLLIDGVGAYNISR 387

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIR-EFS 358
            N F     P++ + + +   + +R   +
Sbjct: 388 NNEFI-HLKPSVILIDKNHQYQVLRVRQT 415


>gi|56707207|ref|YP_169103.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110669677|ref|YP_666234.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           tularensis FSC198]
 gi|224456268|ref|ZP_03664741.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254371423|ref|ZP_04987424.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254874045|ref|ZP_05246755.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|56603699|emb|CAG44660.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110320010|emb|CAL08043.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           tularensis FSC198]
 gi|151569662|gb|EDN35316.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254840044|gb|EET18480.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282158315|gb|ADA77706.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 417

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 57/389 (14%), Positives = 124/389 (31%), Gaps = 35/389 (8%)

Query: 4   TPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +P ++ID+  LL            +        ++K  +   +     +        S  
Sbjct: 28  SPCFIIDENALLERARLFQQAILNQYQNSIAAYSVKTQSLNTIIQKFYEVGFIPEVVSSD 87

Query: 62  EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           E       +              D  +   L     I  +   ++ +    A+KL+   K
Sbjct: 88  EFEQIQKLQLCDKSIIFNGPYKNDASLIKALQLNAMINCDHFDEILRIAKIAKKLNITAK 147

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGE----KCKDKIESEIKNVNGLMFHNNCENKSFL 173
           IGLR+  + +   +          +             +     + GL  H     +   
Sbjct: 148 IGLRVADNKTPQNWSRFGFALTDQQSNSDIFTTIDKIQQIANIQLAGLHCHIGTNIRDIS 207

Query: 174 ----CFSAMLKNIEKEFGHFITQIEWISLGGGIH-----------FTDKDYPVKDFCQRL 218
                   + +  E     +   +EWI LGGG+                 + ++ +   +
Sbjct: 208 RFTAMAKNIAELAETILTKYKLTLEWIDLGGGLAGISPTLSDKRLQPYNPFDLELYAATI 267

Query: 219 KEFSEKYSVQI------YLEPGEAIVTNTTTLNTT-VLDISENIKNLVIVDSSVEAHVPD 271
               ++Y  +         E G ++V  +  L TT V    +N     ++  +    +P 
Sbjct: 268 IAPLKEYLNKTNDKTKLIFELGRSLVDYSVALLTTIVGTREQNEDFQSLITDAGIHTIPT 327

Query: 272 YLLYQESATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
              Y+           +   ++ G SC+  D   +  F   ++ GD++  + V  YNI+R
Sbjct: 328 ISTYRHPIYHLKTDSYHKKTLLLGPSCMQHDFLHDDIFLPKLEYGDKLLIDGVGAYNISR 387

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIR-EFS 358
            N F     P++ + + +   + +R   +
Sbjct: 388 NNEFI-HLKPSVILIDKNHQYQVLRVRQT 415


>gi|290962739|ref|YP_003493921.1| siderophore biosynthesis decarboxylase [Streptomyces scabiei 87.22]
 gi|260652265|emb|CBG75398.1| putative siderophore biosynthesis decarboxylase [Streptomyces
           scabiei 87.22]
          Length = 426

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 51/377 (13%), Positives = 110/377 (29%), Gaps = 36/377 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y+ D   L ++            V+L  A K      +   L  Y+DG   +S  E+ 
Sbjct: 51  PAYVYDMTALRDHAARVRAALPER-VELYYAAKANPEPEILAALGPYVDGYEVASGGELA 109

Query: 65  LGHEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
              +   G   A+       D   DA+          +  +L    + A++      + +
Sbjct: 110 HVAQAVPGRPLAFGGPGKTPDEIRDALERGVARFHVESEHELRMLGELARRAAPARPVGV 169

Query: 123 NPSVS-------------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN 169
               +                   A       R  +  +   +    ++  L  H +  +
Sbjct: 170 LLRFNLAVADGSLAGSALAMGGRPAPFGLDPGRAADVLRPLTDGTHPHLEPLGVHAHLAS 229

Query: 170 KSFLCFSAMLKNIEKEFGHFIT-QIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK 224
                    +     ++   +   +  +++GGG+          +  +++   L   ++ 
Sbjct: 230 GLDAPSLLSVARSVVDWATALDMPVREVNVGGGMAVDYTRPESRFAWQEYGAGLARLTDA 289

Query: 225 YSVQIY-LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPD------------ 271
           +      +EPG A+        T VLD+  +      V      H+              
Sbjct: 290 HPDLTLRIEPGRALTAYCGWYATEVLDVKRSHGEEFAVVRGGTHHLRTPATKGHDQPCSV 349

Query: 272 -YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
             +         P+       + G+ C   D+         ++ GDR++F     Y  N 
Sbjct: 350 LAVERWPHPWPRPSAEGERVTLAGQLCTPKDVLARHVRAPGLRAGDRVAFALAGAYAWNI 409

Query: 331 KNW-FNGINMPTIAVKN 346
            +  F     P   + +
Sbjct: 410 SHHDFLMHPHPGFHIVD 426


>gi|300787026|ref|YP_003767317.1| ornithine decarboxylase [Amycolatopsis mediterranei U32]
 gi|299796540|gb|ADJ46915.1| ornithine decarboxylase [Amycolatopsis mediterranei U32]
          Length = 384

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 51/356 (14%), Positives = 103/356 (28%), Gaps = 26/356 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP  ++D   +              G  +  A+K   A  + D L     G   +   E
Sbjct: 18  PTPCLVVDTDAVAARAGEFGAAF--PGALIRYAVKANPAPPVLDALVAAGIGFDVAGPAE 75

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIG 119
           + L           AY    K     A            +  + ++     A      I 
Sbjct: 76  LELCLGRGAAPAEIAYGNPIKKPREIAFAFGRGVREFTSDAPADVDHLGRYAPGAAVSIR 135

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF---S 176
           + ++   S + F       P   L    +         +    FH   +      +    
Sbjct: 136 VVLDAPDSATPFGRKFGCAPAEALDLVLRAAALGLRPGI---AFHVGSQQPDVTAWGIGV 192

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKD------YPVKDFCQRLKEFSEKYSVQIY 230
           A    +  E      ++  ++LGGG     +                L         ++ 
Sbjct: 193 ATAAKLFAEAAAHGVEMTRLNLGGGFATAHRTAVPSLAAYAATIAAALDAAFPAGRPELL 252

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-----DYLLYQESATIYPNT 285
           LEPG  +V +   L T V+ +++  +   +       +       + + Y+       + 
Sbjct: 253 LEPGRVLVADAGLLRTEVVLVADRGERRWVYLDIGRYNGLAEAENEAIAYRFEPVGCHDG 312

Query: 286 GPYTAMVCGRSCLAGDIFG---EFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337
                ++ G +C   D+      +   + ++ GDR+       Y  +  +  FNGI
Sbjct: 313 PSGPVVLAGPTCDGDDVLYQRTRYELPRSLRTGDRLDVPGTGAYTASYASVGFNGI 368


>gi|283769531|ref|ZP_06342427.1| pyridoxal-dependent decarboxylase, C-terminal sheet domain protein
           [Bulleidia extructa W1219]
 gi|283103799|gb|EFC05185.1| pyridoxal-dependent decarboxylase, C-terminal sheet domain protein
           [Bulleidia extructa W1219]
          Length = 369

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 53/380 (13%), Positives = 122/380 (32%), Gaps = 39/380 (10%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPYY++D+  LL  +     I       L  ++K      + ++L + +D     S  
Sbjct: 1   MKTPYYVMDENVLLKRICDIKKIADGKWG-LCYSIKANPF--LVESLFETVDQLEVCSPG 57

Query: 62  EVMLGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+ +  + K        +   K  +   +A         F ++    + ++         
Sbjct: 58  EMKICIDRKVPAFKILMSGVNKTVEDIQEAFDYGVRLFSFESIVHFERLQEV-------- 109

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-----SEIKNVNGLMFHNNCENKSFL 173
                   S+ K          ++ G   +D             + G+ +    + K   
Sbjct: 110 -----LKNSHEKVKAYIRLTSGNQFGMSVEDTEYLFEHPDPQIEIIGIHYFAGTQRKKSQ 164

Query: 174 CFSAMLKNIEKEFGHFITQIEW---ISLGGGIHFTDKDYPVKD----FCQRLKEFSEKYS 226
              + L+ ++ +   +  +      +  G G+                 + +++      
Sbjct: 165 HQISELEQLDAQLKLWEKKYRLSLALEYGPGLPVPLFVGDDFSEDLAPLKAIQDSLSSLK 224

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ----ESATIY 282
            ++ +E G  +V N  +  + V DI +   + V +      H+  Y              
Sbjct: 225 REVMVEMGRFMVYNCGSYYSQVQDIKKLNDSYVAILDGGIHHLNYYGQMMGMKVPLLESP 284

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPT 341
            N       + G  C   D+         +KIGD + F +   Y +      F    +P+
Sbjct: 285 QNEEMADYCLAGSLCTTADVLVRKVTLPKLKIGDVLVFHNCGAYGVTEGIGLFLSRKLPS 344

Query: 342 IAVKNVDGTIKAIR--EFSY 359
           +   + +  ++ +R  E +Y
Sbjct: 345 VYKLSGNK-LELLRDQEETY 363


>gi|258655147|ref|YP_003204303.1| Orn/DAP/Arg decarboxylase 2 [Nakamurella multipartita DSM 44233]
 gi|258558372|gb|ACV81314.1| Orn/DAP/Arg decarboxylase 2 [Nakamurella multipartita DSM 44233]
          Length = 403

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 57/356 (16%), Positives = 111/356 (31%), Gaps = 25/356 (7%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP   +D   +         +    GV L  A+K   +  +  TL         +S  E+
Sbjct: 24  TPVLRVDCAVVQARYRRLAAVL--PGVDLHYAVKANPSPPVLRTLAGLGARWDVASPGEI 81

Query: 64  MLGHEKFGGETH-AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                      H +Y    K     A  +      +   S     K  A     +I +R+
Sbjct: 82  EAVLAVDPDPRHLSYGNPIKKSSDIAAAARRGVRRYTVDSPAELAKVSAHAPGAQILVRL 141

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           + S + + + L        R          +    V G+ FH   + +    +   L   
Sbjct: 142 STSGAGADWPLGGKFGCPEREARTLLRTAAAAGHEV-GISFHVGTQQRDPGAWDGPLAAA 200

Query: 183 ---EKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSVQIYLEP 233
              ++       ++  ++LGGG                +     ++         +  EP
Sbjct: 201 GRLDRGLRGAGARLSTVNLGGGFPAGMLGRTQSAARYGQAIRDAVRRAFGAQPPALMAEP 260

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLL-YQESATIYPNTGPY-- 288
           G  +V +  TL + V+ +S+      +   +      V  Y    +    +    GP+  
Sbjct: 261 GRFLVADAGTLVSEVVLVSDRGGERWVYLDAGLFTGLVEAYGESLRYRLAVERTGGPFAS 320

Query: 289 ---TAMVCGRSCLAGDIFG---EFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGI 337
               A++ G +C + D+      +     ++ GDR+ F     Y  +     FNG 
Sbjct: 321 ATTEAILAGPTCDSLDVLYRRHRYRLPADLRPGDRVHFLSAGAYTASYSTVGFNGF 376


>gi|196229284|ref|ZP_03128149.1| Orn/DAP/Arg decarboxylase 2 [Chthoniobacter flavus Ellin428]
 gi|196226516|gb|EDY21021.1| Orn/DAP/Arg decarboxylase 2 [Chthoniobacter flavus Ellin428]
          Length = 393

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 47/363 (12%), Positives = 102/363 (28%), Gaps = 27/363 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TP Y    + L             A  +LL +LK      +     ++      +S  
Sbjct: 23  LETPRYFYSGELLTLAWHALHSSLP-ADAQLLYSLKANPHPTIVRYFAEHGALFDVASRG 81

Query: 62  E--VMLGHEKFGGETHAYNVAYKDCEIDAVLSN----CDTIIFNTVSQLNKFKDKAQKLH 115
           E  ++L  +         +   ++ +    + +            +  + +         
Sbjct: 82  EMELLLATQGSLQRAVWISPCKREADYLWAVQHGLGASVIDSREEIGTVRRVAATQPDTM 141

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCK--DKIESEIKNVNGLMFHNNC----EN 169
               LR+    + +   L   ++    L E  +    +  +   + GL  +       E 
Sbjct: 142 PSYLLRVQRRAASAGTSLWADSQFGVTLDEAIEFTHTLRRDGIQIAGLHGYFASNLFAEQ 201

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
           +       ++           T +  + +GGG  +       +    RL++     + + 
Sbjct: 202 EIAQNTQDLMAQALTWQASTGTSMRVLDVGGGFGWPLGVEDGELSLPRLRDCLAPLAAEF 261

Query: 230 ------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESA--- 279
                 + E G  +      L  TV+ + E      +V D  +       +         
Sbjct: 262 SPGTALWFESGRFLTAGAGVLVLTVMSVKERPGTTSVVLDGGMNIFGLPSMRLGFRPLTV 321

Query: 280 ---TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFN 335
                          + G  C  GD F E     P+K GDR++      Y      + F 
Sbjct: 322 ILLAREWAGPLQPHTLFGPLCTPGDKFCEKVLLPPLKAGDRLAILHAGAYGATAGRSSFL 381

Query: 336 GIN 338
              
Sbjct: 382 SFP 384


>gi|62261067|gb|AAX77957.1| unknown protein [synthetic construct]
          Length = 452

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 57/389 (14%), Positives = 124/389 (31%), Gaps = 35/389 (8%)

Query: 4   TPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +P ++ID+  LL            +        ++K  +   +     +        S  
Sbjct: 54  SPCFIIDENALLERARLFQQAILNQYQNSIAAYSVKTQSLNTIIQKFYEVGFIPEVVSSD 113

Query: 62  EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           E       +              D  +   L     I  +   ++ +    A+KL+   K
Sbjct: 114 EFEQIQKLQLCDKSIIFNGPYKNDASLIKALQLNAMINCDHFDEILRIAKIAKKLNITAK 173

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGE----KCKDKIESEIKNVNGLMFHNNCENKSFL 173
           IGLR+  + +   +          +             +     + GL  H     +   
Sbjct: 174 IGLRVADNKTPQNWSRFGFALTDQQSNSDIFTTIDKIQQIANIQLAGLHCHIGTNIRDIS 233

Query: 174 ----CFSAMLKNIEKEFGHFITQIEWISLGGGIH-----------FTDKDYPVKDFCQRL 218
                   + +  E     +   +EWI LGGG+                 + ++ +   +
Sbjct: 234 RFTAMAKNIAELAETILTKYKLTLEWIDLGGGLAGISPTLSDKRLQPYNPFDLELYAATI 293

Query: 219 KEFSEKYSVQI------YLEPGEAIVTNTTTLNTT-VLDISENIKNLVIVDSSVEAHVPD 271
               ++Y  +         E G ++V  +  L TT V    +N     ++  +    +P 
Sbjct: 294 IAPLKEYLNKTNDKTKLIFELGRSLVDYSVALLTTIVGTREQNEDFQSLITDAGIHTIPT 353

Query: 272 YLLYQESATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
              Y+           +   ++ G SC+  D   +  F   ++ GD++  + V  YNI+R
Sbjct: 354 ISTYRHPIYHLKTDSYHKKTLLLGPSCMQHDFLHDDIFLPKLEYGDKLLIDGVGAYNISR 413

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIR-EFS 358
            N F     P++ + + +   + +R   +
Sbjct: 414 NNEFI-HLKPSVILIDKNHQYQVLRVRQT 441


>gi|312376500|gb|EFR23563.1| hypothetical protein AND_12667 [Anopheles darlingi]
          Length = 681

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 53/356 (14%), Positives = 114/356 (32%), Gaps = 24/356 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  +++   +++        +K   V    A+KC     +   L     G   +S  E+ 
Sbjct: 32  PVNVLNLDDIVDKHKNWR--QKLPTVVPFYAVKCNNHPAILQLLVALGCGFDCASRCELQ 89

Query: 65  LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                    E   Y    K  +    A       + F++V +L K           + +R
Sbjct: 90  TILGLGVAPEKIIYANPAKTKDSILYARKMGVKRMTFDSVDELEKIAQLYPDAELVLRIR 149

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
            +   +           P  R         +    +V G+ FH  C ++    +   ++ 
Sbjct: 150 YDAREAVLPLGRKFGCDPD-REALPLLRCAKRHQLSVIGVSFHVGCGSRDGETYYWAIRK 208

Query: 182 IEKEFG---HFITQIEWISLGGGIH--FTDKDYPVKDFCQRL---KEFSEKYSVQIYLEP 233
             + F        Q+  + +GGG              F  +    +   ++ ++++  EP
Sbjct: 209 AIEIFDSASQLGMQMHLLDIGGGYPGGNDRTFDDHVHFINKALNEQIVQQRRNIEVIAEP 268

Query: 234 GEAIVTNTTTLNTTVL----DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY- 288
           G   V +  T    VL    D  ++ + + +     +     +  Y E A          
Sbjct: 269 GRYCVESAVTALVNVLAKSYDRDDSGEIIRVRYYLDDGLYGSFDWYDELAIPEVQEHRRS 328

Query: 289 -----TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                 +++ GR+    DI  +       ++ D + F +   Y +     FNG+++
Sbjct: 329 GSPLIPSVLYGRTMCDNDIIAKEILLPEHEVDDCLVFPNRGAYGMALGRGFNGVSL 384


>gi|260951019|ref|XP_002619806.1| hypothetical protein CLUG_00965 [Clavispora lusitaniae ATCC 42720]
 gi|238847378|gb|EEQ36842.1| hypothetical protein CLUG_00965 [Clavispora lusitaniae ATCC 42720]
          Length = 447

 Score =  133 bits (335), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 54/364 (14%), Positives = 111/364 (30%), Gaps = 34/364 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++  +            V+   A+KC     +   L +       +S  E+  
Sbjct: 67  FFVADLGQVFRSFQLWKETLPR--VQPFYAVKCNTDPHVVSLLGRMGANFDCASKTEIDT 124

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR-IN 123
                F  +   Y    K           +  +    +    +K K      +I +R + 
Sbjct: 125 VLGLGFTPDRIIYANPCKTNSFIRHACEKNVNLTTVDNANELYKLKRFHPRTRILIRIVT 184

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S    +             +          +V G+ FH       F  F   +K+  
Sbjct: 185 DDESAQCRLSTKFGCTVEVAVNQLLPLCRELDLDVAGVAFHVGSGATCFDSFFHAIKDAR 244

Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS-----EKYSVQIYLEPGE 235
           + F        ++  + +GGG      D   +   + L  F      +++ +Q   EPG 
Sbjct: 245 RIFDAGEQLGLRLTILDIGGGFEPCSFDAATQVVNRALDTFFPTTYAQQHGMQFIAEPGR 304

Query: 236 AIVTNTTTLNTTVL-----DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP--- 287
            +V N  TL T ++     D +  ++ ++ ++  V  ++   L   +             
Sbjct: 305 FMVANAFTLATHIIARRDLDSNSGMEAMLYINDGVYGNLNCVLFDHQHPEAKVLKHAGKM 364

Query: 288 -------------YTAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                        Y   + G +C   D    +      V +GD + F ++  Y       
Sbjct: 365 FPGEMDGETQSQHYNFSIWGPTCDGLDCVSSKTALPANVGVGDWLYFPELGAYTSAATTS 424

Query: 334 FNGI 337
           FNG 
Sbjct: 425 FNGF 428


>gi|255028451|ref|ZP_05300402.1| hypothetical protein LmonL_03126 [Listeria monocytogenes LO28]
          Length = 280

 Score =  133 bits (334), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 81/279 (29%), Gaps = 32/279 (11%)

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHNNCENK 170
           R+ P +           +  S+ G    +             S   ++ GL  H   +  
Sbjct: 1   RVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHIGSQIF 60

Query: 171 SFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK-DFCQRLKEFSEK- 224
               F    + I  +   +        + ++LGGG            +  + +++  ++ 
Sbjct: 61  ETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQIMDEV 120

Query: 225 ---------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYL 273
                       +I++EPG ++V    T    V    E       +     +  ++   L
Sbjct: 121 RDVAESNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDNIRPAL 180

Query: 274 LYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
                  +           T  + G+ C +GD+            G+ ++      Y   
Sbjct: 181 YDAHYDAVLAANPEKVAEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTGAYGYA 240

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367
             + +N I  P +           +   +Y +   N LS
Sbjct: 241 MASNYNRIPRPPVVFVENGVDKLIVARETYENLVQNDLS 279


>gi|257064415|ref|YP_003144087.1| diaminopimelate decarboxylase [Slackia heliotrinireducens DSM
           20476]
 gi|256792068|gb|ACV22738.1| diaminopimelate decarboxylase [Slackia heliotrinireducens DSM
           20476]
          Length = 395

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 45/386 (11%), Positives = 105/386 (27%), Gaps = 47/386 (12%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D +   N L           V L  A+K      + +   Q        S  E
Sbjct: 14  GTPSYVFDLEAFRNRLRECQ-AIVGPEVHLCFAMKANP--WLINAAAQVASKLEVCSPGE 70

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + L        +   Y+   K+      A+      +   ++  +      A++ +  + 
Sbjct: 71  LDLCERANINPDQIVYSGVNKEICDITHAIEYGAGVLTAESLLHVEYIDQVAREHNLVVD 130

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNCENKSF 172
           +    +               S+ G    + +             + G+ +    +    
Sbjct: 131 VLPRLN-------------AGSQFGMSKDELLWLVDNRDRFPGLKLVGIHYFVYTQRLKL 177

Query: 173 LCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKD----FCQRLKEFSEK 224
                 +  +              +E +  G G+                 + + +    
Sbjct: 178 KHQRKEMAMLSDLIDELANEHDFVVERLEYGPGLGVPYFMDDDFSDDLLPIREIADDLRA 237

Query: 225 Y--SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP---DYLLYQESA 279
                ++ +E G    +   T  T  +D+  N      +      H+      +      
Sbjct: 238 LAAKTELTIEMGRFFASPCGTYFTKAMDLKSNKGTNYAILDGGMHHITYFGQMMGMHVPP 297

Query: 280 TIYPNTGPY-------TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK- 331
            +                 +CG  C   D+         ++ GD ++F     Y +    
Sbjct: 298 IVNLTREAEDRESEVAEWCLCGSLCTVNDVLVRAVELDSLQRGDVLAFGRCGAYAVTEGV 357

Query: 332 NWFNGINMPTIAVKNVDGTIKAIREF 357
           + F    +P + ++  DG++   R+F
Sbjct: 358 SLFLSRRLPRVLLREADGSVVLARDF 383


>gi|118498245|ref|YP_899295.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           novicida U112]
 gi|194324429|ref|ZP_03058202.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           novicida FTE]
 gi|95045105|gb|ABF50970.1| FigC [Francisella novicida U112]
 gi|118424151|gb|ABK90541.1| pyridoxal-dependent decarboxylase [Francisella novicida U112]
 gi|194321494|gb|EDX18979.1| diaminopimelate decarboxylase [Francisella tularensis subsp.
           novicida FTE]
          Length = 417

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 56/390 (14%), Positives = 121/390 (31%), Gaps = 37/390 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +P ++ID+  LL            +        ++K  +   +     +        S  
Sbjct: 28  SPCFIIDENALLERARLFQQAILNQYQNSIAAYSVKTQSLNTIIQKFYEVGFIPEVVSSD 87

Query: 62  EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E       +              D  +   L     I  +   ++ +    A+KL+    
Sbjct: 88  EFEQIQKLQLCDKSIIFNGPYKNDASLIKALQLNAMINCDHFDEILRIAKIAKKLNITAK 147

Query: 120 LRINP-------SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF 172
           + +         + S   F L D                +     + GL  H     +  
Sbjct: 148 IGLRIADNKTPQNWSRFGFALTDQQNNSDIF-TTIDKIQQIANIQLAGLHCHIGTNIRDI 206

Query: 173 L----CFSAMLKNIEKEFGHFITQIEWISLGGGIH-----------FTDKDYPVKDFCQR 217
                    + +  E     +   +EWI LGGG+                 + ++ +   
Sbjct: 207 SRFTAMAKNIAELAETILTKYKLTLEWIDLGGGLAGISPTLSDKRLQPYNPFDLELYAAT 266

Query: 218 LKEFSEKYSVQI------YLEPGEAIVTNTTTLNTT-VLDISENIKNLVIVDSSVEAHVP 270
           +    ++Y  +         E G ++V  +  L TT V    +N     ++  +    +P
Sbjct: 267 IIAPLKEYLNKTNDKTKLIFELGRSLVDYSVALLTTIVGTREQNEDFQSLITDAGIHTIP 326

Query: 271 DYLLYQESATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
               Y+           +   ++ G SC+  D   +  F   ++ GD++  + V  YNI+
Sbjct: 327 TISTYRHPIYHLKTDSYHKKTLLLGPSCMQHDFLHDDIFLPKLEYGDKLLIDGVGAYNIS 386

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIR-EFS 358
           R N F     P++ + + +   + +R   +
Sbjct: 387 RNNEFI-HLKPSVILIDKNQQYQVLRVRQT 415


>gi|332184801|gb|AEE27055.1| Diaminopimelate decarboxylase [Francisella cf. novicida 3523]
          Length = 416

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 60/386 (15%), Positives = 131/386 (33%), Gaps = 36/386 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALY--IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +P ++ID+  LL   +      +++        ++K  +   +     Q        S  
Sbjct: 28  SPCFIIDENALLERANFFQQTILKQYKNSIAAYSVKTQSLSTIIQKFYQAGFIPEVVSSD 87

Query: 62  EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E  L    + +            D  +   L     I  +   ++ +    A++L+    
Sbjct: 88  EFQLIEKLQLWDKGIIFNGPYKNDASLIKALRLNAIINCDHFDEILRIAKIAKELNITAK 147

Query: 120 LRINP-------SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF 172
           + +         + S   F L++                + +   + GL  H     +  
Sbjct: 148 IGLRVADNKTPQNWSRFGFALSNQQNNDDIFAV-IDKIQQIQNIQLAGLHCHIGTNIRDI 206

Query: 173 LCFSAMLK----NIEKEFGHFITQIEWISLGGGIH-----------FTDKDYPVKDFCQR 217
             F+AM K      E+    +   ++WI LGGG+               + + ++ + + 
Sbjct: 207 SRFAAMAKNIAGLAERILTKYKLTLDWIDLGGGLAGISPTLKDKQLHPYRPFDLELYSRT 266

Query: 218 LKEFSEKYSVQI------YLEPGEAIVTNTTTLNTT-VLDISENIKNLVIVDSSVEAHVP 270
           +    ++Y  +         E G ++V  +  L TT V    +N     ++  +    +P
Sbjct: 267 IIAPLKEYLNKTNNKTKLIFELGRSLVDYSVALLTTIVGTREQNEDFQSLITDAGIHTIP 326

Query: 271 DYLLYQESATIYPNTGPYTAMVC-GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
               Y+           Y   +  G SC+  D   +  F   ++ GD++  + V  YNI+
Sbjct: 327 TTSTYRHPIYHLKTDDDYKKTILLGPSCMQHDFLDDDVFLPKLRYGDKLLIDGVGAYNIS 386

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIR 355
           R N F     P++ + + +     +R
Sbjct: 387 RNNEFI-HLKPSVILIDKNQQYHVLR 411


>gi|195997033|ref|XP_002108385.1| hypothetical protein TRIADDRAFT_19621 [Trichoplax adhaerens]
 gi|190589161|gb|EDV29183.1| hypothetical protein TRIADDRAFT_19621 [Trichoplax adhaerens]
          Length = 351

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 59/349 (16%), Positives = 100/349 (28%), Gaps = 20/349 (5%)

Query: 21  ALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNV 79
             +      V    ALKC    G   TL  +  G    S  E+    +     E   +  
Sbjct: 1   MQWFSLLPRVHPYFALKCNVDRGFLATLLAFGFGFEGVSKAEIDTVLKMGASPEKIIFAN 60

Query: 80  AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRP 139
            YK        ++ +  +    +    +K K      ++ LR+      SK+ L      
Sbjct: 61  PYKPISHIKYAAHQNVNLMTFDNVTELYKIKEFYPKARLLLRLKFDDPRSKYELGKKYGV 120

Query: 140 FSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWI 196
                            NV G+ +H          F   ++  +  F +          +
Sbjct: 121 EIDEVTHILQIARELQLNVVGISYHVGGGYTDACNFLKAIELAKTAFNYAKSIGINFNVL 180

Query: 197 SLGGGIHFTDKDYPVKDFC----QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDIS 252
            +GGG          K          K F  + ++ I  EPG        TL   V    
Sbjct: 181 DIGGGFPGQANSLFKKICSNISSALDKHFPVEDNISIIAEPGRYFAETAFTLVLCVAGKR 240

Query: 253 ENIKNLVIVDSSVEAHVPD----------YLLYQESATIYPNTGP--YTAMVCGRSCLAG 300
           E  +    +    E +V D               +   +        Y+  + G +    
Sbjct: 241 EIYEIDQKIPKKFEYYVNDGRYGSFSEFLMSYGCQYPQVIGKKSETLYSTRLWGPTVSGS 300

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349
           D   E  +   +++GD I FE++  Y       FNG+  P        G
Sbjct: 301 DCIFEECYLPELEVGDLIYFEEMGAYTTVLGTNFNGLTRPVSYYVIDQG 349


>gi|301106921|ref|XP_002902543.1| diaminopimelate decarboxylase, putative [Phytophthora infestans
           T30-4]
 gi|262098417|gb|EEY56469.1| diaminopimelate decarboxylase, putative [Phytophthora infestans
           T30-4]
          Length = 527

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 55/382 (14%), Positives = 107/382 (28%), Gaps = 47/382 (12%)

Query: 3   KTPY-YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            +P   L +       L               LA+K     G+         G   +S+ 
Sbjct: 105 DSPLTNLFNWDAFQKRLANLHTAFPEPQFNHALAVKTNPTRGLLRGACAKGFGAECASIA 164

Query: 62  EVMLGHE-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-------- 111
           E        F      Y +      E+  +L     I  +   ++ K  +          
Sbjct: 165 EAKHALSLGFEPRKVVYDSPCKTIGELREMLMAGVYINLDNEEEIRKVNEIFTELGDSEQ 224

Query: 112 --QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK-------IESEIKNVNGLM 162
              K  +++GLRINP V              S+ G     +       I  +   + G+ 
Sbjct: 225 TKNKHAEQLGLRINPVVGGGTIDATSTATVTSKFGLPLTAETKSRLLEIFKQNSWLQGVH 284

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFI-----TQIEWISLGGGIHFTD-----KDYPVK 212
            H   +       +A  K                Q+  + +GGG+         + Y   
Sbjct: 285 VHVGSQGCPLDLLTAGAKRAVAFALEVNAYVGHKQVSVLDIGGGMLTVYDGGESEAYDFN 344

Query: 213 DFCQRLKEFSEKYSVQ----IYLEPGEAIVTNTTTLNTTVLDISE-------------NI 255
           ++   ++    +        I  E G ++        + V  I +             + 
Sbjct: 345 EYADVVRRQVPELFTSGFSSIITEFGRSVFVKPGVTVSKVEAIKDWAGQHIAVVHVGADQ 404

Query: 256 KNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIG 315
                      +H    L         P++      + G  C +GD   +     P+++G
Sbjct: 405 FPRTAYLPEQWSHCITVLDSHGRTKTNPSSDYVRQDIAGPLCFSGDFLAKQLLLPPIQVG 464

Query: 316 DRISFEDVAGYNINRKNWFNGI 337
           D +   D  GY ++  + +N  
Sbjct: 465 DFVVIHDTGGYTMSMHSKYNSR 486


>gi|167644230|ref|YP_001681893.1| Orn/DAP/Arg decarboxylase 2 [Caulobacter sp. K31]
 gi|167346660|gb|ABZ69395.1| Orn/DAP/Arg decarboxylase 2 [Caulobacter sp. K31]
          Length = 420

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 44/339 (12%), Positives = 94/339 (27%), Gaps = 23/339 (6%)

Query: 20  TALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAYN 78
            A + +      +  A+K   +  +   L          +SL E+ L  +   G   A+ 
Sbjct: 31  AARWFQAEFKGDVFYAVKANPSPWVIRELADAGVRSFDVASLNEIELVSQHAPGSRMAFM 90

Query: 79  VAYKDCEID---AVLSNCDTIIFNTVSQLNKFKDK---AQKLHKKIGLRINPSVSYSKFI 132
              K               T  F+T  +L K +D    A+ L+  + + +    +     
Sbjct: 91  HPVKSRVAISAAYFDHGVRTFSFDTHEELAKIQDATGAAKDLNLIVRMGVQADGAAYSLS 150

Query: 133 LADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQ 192
                 P +              +++ G+ FH   +      + A +    +        
Sbjct: 151 GKFGVEPHNAPALLL--AARRATQDLMGVSFHVGSQCMRPTAYQAAMAQASRALVRAGVL 208

Query: 193 IEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDIS 252
            + + +GGG           D  + +      ++  +  E  +        L      + 
Sbjct: 209 ADVVDVGGGFPSIYPGMVPPDMSEYMAAIDRGFNDMMVHESTQLWCEPGRALVAEASSVL 268

Query: 253 ENIKNLVIVDSSVEA----------HV---PDYLLYQESATIYPNTGPYTAMVCGRSCLA 299
             ++        +            H+        Y++                G +C +
Sbjct: 269 VKVELKKGDALYLNDGSYGSLFDAAHMKWPFPVKAYRKDGGEVSEEALRPFRFYGPTCDS 328

Query: 300 GDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
            D   G F+    +  GD I    +  Y +     FNG 
Sbjct: 329 VDHMPGPFYLPDGIDEGDYIEIGMLGAYGVAMATRFNGF 367


>gi|157103351|ref|XP_001647941.1| ornithine decarboxylase [Aedes aegypti]
 gi|108884773|gb|EAT48998.1| ornithine decarboxylase [Aedes aegypti]
          Length = 408

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 52/363 (14%), Positives = 95/363 (26%), Gaps = 27/363 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +L +   L+       +++    VK   A+K      + +       G   +S+ EV 
Sbjct: 36  PLHLTEVDTLVK--RHYEWLQHLPRVKPYYAVKSNDEASLVEATVLMGLGYDCASMAEVR 93

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTI-IFNTVSQLNKFKDKAQKLHKKIGLRI 122
              E     E   +    K             + +F++  +L K      +    I  R 
Sbjct: 94  RMLELGVERERIIFAQPQKTIVSLQYARKHKILTVFDSECELRKIHQHYPEAEVLIRYRF 153

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF---SAML 179
           +   S             +   +      +     V G  F+          F       
Sbjct: 154 DSKKSKVNLGSKFGCETENES-KSLLHVAKQLGIKVVGWCFNVGSGCTDADVFYAAIKKG 212

Query: 180 KNIEKEFGHFITQIEWISLGGGI----HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
           + I         +   I LGGG         ++Y V       + +     + I+ EPG 
Sbjct: 213 REIHDYATSIGFKFRMIDLGGGFMGDKGCGIEEYAVHINRALEECYPASEDIFIFAEPGR 272

Query: 236 AIVTNTTTLNTTVLDISENIKNLV-----IVDSSVEAHVPDYLLYQESATIYPNT----- 285
                  T  + V                 V       +                     
Sbjct: 273 YYCAAAVTSISPVHGKRILCNENDPLKIEQVFYYFNDGMYGTFYSPRYRNQTLYPIVWKS 332

Query: 286 -----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                  Y   + G +C   D F +      +++ D + FE+   Y       FNG  +P
Sbjct: 333 GGNLGTTYKTTLFGPTCDGNDFFAKDIDLPELEVSDFVVFENQGAYARVHSCRFNGFCLP 392

Query: 341 TIA 343
            + 
Sbjct: 393 KVI 395


>gi|294816530|ref|ZP_06775173.1| Putative diaminopimelate decarboxylase [Streptomyces clavuligerus
           ATCC 27064]
 gi|326444863|ref|ZP_08219597.1| diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC
           27064]
 gi|294329129|gb|EFG10772.1| Putative diaminopimelate decarboxylase [Streptomyces clavuligerus
           ATCC 27064]
          Length = 430

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 56/375 (14%), Positives = 110/375 (29%), Gaps = 40/375 (10%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P YL D   L  +            V+L  A K      +   L  Y+DG   +S  E+ 
Sbjct: 20  PAYLYDLGALREHAAAVRAALPER-VELYYAAKANPETEILTALAPYVDGYEVASGGELA 78

Query: 65  LGHEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                  G   A+       +    A+ S        +  +L    D A +   +  + +
Sbjct: 79  HVARAVPGRPLAFGGPGKTPEEIRAALASGVGRFHVESAHELAVLADLAARARVRARVLL 138

Query: 123 NPSVSYSKFILAD----PNRPFSRLGEKCKDKI---------ESEIKNVNGLMFHNNCEN 169
             +++    +L           +  G    D            S    + G+  H     
Sbjct: 139 RFNLAVPGELLDGSALAMGGRPAPFGIDPADADAVVRTLTEGSSPWLELFGIHAHLASGL 198

Query: 170 ---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFS 222
              +     +++ +            +  +++GGG+        + +    + + L   +
Sbjct: 199 DARRQLAVAASVTRWAAALTARHGVPLREVNVGGGMAVDYARPGERFDWAAYGRGLAALA 258

Query: 223 EKYSVQIY-LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP----------- 270
           +++   +  +EPG A+        T VLD+  +      V      H+            
Sbjct: 259 DEHPDTVLRIEPGRALTVYCGWYATDVLDVKRSRGEDFAVVRGGTHHLRTPATKGHDQPC 318

Query: 271 ---DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFE-KPVKIGDRISFEDVAGY 326
                  +          GP    + G+ C   D+         P++ GDR+ F     Y
Sbjct: 319 AVLPADDWPHPWPRPATGGPGPVTLVGQLCTPKDLLARAVPLTAPLRAGDRVLFALAGAY 378

Query: 327 NINRKNW-FNGINMP 340
             N  +  F     P
Sbjct: 379 AWNISHHDFLMHPRP 393


>gi|218190653|gb|EEC73080.1| hypothetical protein OsI_07045 [Oryza sativa Indica Group]
 gi|222622767|gb|EEE56899.1| hypothetical protein OsJ_06555 [Oryza sativa Japonica Group]
          Length = 229

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 80/223 (35%), Gaps = 14/223 (6%)

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP-----VKD 213
            G   H+  +   F   + ++ N   E      ++E++++GGG+               D
Sbjct: 6   EGNSTHSRTQVDIFRDAAGLMVNYVDEIRAQGFELEYLNIGGGLGIDYHHTDAVLPTPMD 65

Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-HVPDY 272
               ++E      + + +EPG +++ NT      V  +  N     IV     A  +   
Sbjct: 66  LINTVRELVLSRDLTLIIEPGRSLIANTCCFVNRVTGVKSNGTKNFIVVDGSMAELIRPS 125

Query: 273 LLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
           L          +  P     T  + G  C + D  G+         G  +   D   Y +
Sbjct: 126 LYGAYQHIELVSPSPDAEVATFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDAGAYCM 185

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIRE-FSYND---YYNNLS 367
           +  + +N    P       DG+I  IR   S++D   +++NLS
Sbjct: 186 SMASTYNLKLRPPEYWVEDDGSIAKIRRGESFDDYMKFFDNLS 228


>gi|238497239|ref|XP_002379855.1| ornithine decarboxylase, putative [Aspergillus flavus NRRL3357]
 gi|220694735|gb|EED51079.1| ornithine decarboxylase, putative [Aspergillus flavus NRRL3357]
          Length = 394

 Score =  132 bits (333), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 49/343 (14%), Positives = 100/343 (29%), Gaps = 25/343 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+++ D  +++              ++   A+KC +       L++       +S  E+ 
Sbjct: 35  PFFVADGSRIVEQHLRWKSSL--PDIQPFYAVKCNSDVNFLRYLDRLGVNFDCASQGEIE 92

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           L            +    K        +          +     K K       + LRI 
Sbjct: 93  LILSLGVDPSRIIFAHPCKSISALHFAAKQGIRWATFDNIDELEKVKQHSPQIGLLLRIF 152

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
                +K  L D              +       + G+ FH          F+  ++   
Sbjct: 153 AEDDGAKVCLGDKFGAPWNTTVALLKRARELHLQIVGVSFHIGSGASDPEAFTTAIQQAR 212

Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
             F         +  + +GGG   T+ ++        L        V++  EPG    T 
Sbjct: 213 HVFDQGERLGFNMTVLDVGGGFQHTNFEFMASSLRPALAREFGDRPVRVIAEPGRFYATP 272

Query: 241 TTTLNTTVLDISEN------------------IKNLVIVDSSVEAHVPDYLLYQESATIY 282
             TL   V+    +                          S  E ++P  +   E    +
Sbjct: 273 CYTLVCKVIARRTHIGAAPSNPADMLYQNDGLYGCFSCGWSEGEEYMPVLVKQNEGRDDH 332

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFEDVA 324
             +G +   + G +C + D   +    +  VK+GD + ++D+ 
Sbjct: 333 RESGEHRYSLWGPTCDSIDQIAKEVVMDGEVKVGDWLVYKDMG 375


>gi|316970259|gb|EFV54235.1| ornithine decarboxylase [Trichinella spiralis]
          Length = 389

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 53/374 (14%), Positives = 107/374 (28%), Gaps = 34/374 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           ++L D  KL+      +       +    A+KC     +   L         +S  E+  
Sbjct: 19  FFLFDLGKLIRLHQRWIEHL--PQIHPFYAVKCNDNKLLLSLLASMGVNFDCASKNEIET 76

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                   E   +    K           N   + F+   +L K      K    + +  
Sbjct: 77  VLSIGVSPERIIFANPCKPRSAIEYANSQNVRYMTFDNEQELQKIHSLYPKSELLMRIST 136

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
               +   F       P +   E  K  I    K V         E+ ++    A  + +
Sbjct: 137 FNYNAVISFEKKFGCNPITEAPELLKKAIVLGCKVVGIWSG--CRESSAYTNSIANARKL 194

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKD-------YPVKDFCQRLKEFSEKYSVQIYLEPGE 235
                 F   ++ + +GGG     ++         ++        F    +V +  EPG 
Sbjct: 195 FDLGNQFGCPLKLLDIGGGFSAVHENGALPFESLAMEINQALSFYFPSDMNVTVIAEPGR 254

Query: 236 AIVTNTTTLNTTVL------------------DISENIKNLVIVDSSVEAHVPD-YLLYQ 276
                   L T V+                  DI         +  S    + +  +   
Sbjct: 255 YYAAKPFQLCTRVIGYRKVAASKITENPADDADIGFMYFINDGIYGSFNCILTENTVPQG 314

Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
           +       +  Y + V G++C + DI  +      +   + + F+++  Y++     FNG
Sbjct: 315 QLLKKRKASKTYWSTVWGQTCDSLDIILKKCQLPELFENELLLFQNMGAYSLTVSTEFNG 374

Query: 337 INMPTIA-VKNVDG 349
            +   +      D 
Sbjct: 375 FSRTKVYPYIKEDD 388


>gi|296283800|ref|ZP_06861798.1| ornithine/diaminopimelate/arginine decarboxylase,family protein
           [Citromicrobium bathyomarinum JL354]
          Length = 420

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 42/376 (11%), Positives = 103/376 (27%), Gaps = 34/376 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++  +  L   +         +   +  A+K      +   +   +DG   +S  E
Sbjct: 46  DTPLFVYSRDMLDARMAALRAAMPESLA-IHFAVKANPHPDVIAHMAGLVDGFDLASGGE 104

Query: 63  -VMLGHEKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
             +L      G   ++     +  EI A +    T+   + ++  +  +  + L  +  +
Sbjct: 105 LAILQGVGIDGAHISFAGPGKRPREIRAAIEAGVTLNCESETEAERALEIGRDLGIQPKV 164

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV-------NGLMFHNNCENKS-- 171
            +  +  +            ++       ++ + I+++        GL  +   +     
Sbjct: 165 AVRVNPDFDMRGSGMKMGGGAKQFGLDAQRVPALIRHLIDGGAQWRGLHIYTGSQTLEAD 224

Query: 172 --FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS--- 226
                   +L    +           ++LGGG                +           
Sbjct: 225 AVIETQGHVLDLAARIAREVGQPCPALNLGGGFGIPYFAGNEPLDIGAIGAALGDRFANL 284

Query: 227 ------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-------- 272
                  ++ +E G  +V         ++D  E+   + ++      H            
Sbjct: 285 PEELAETEMAIELGRYLVGEAGVYLAQIVDRKESQGEIFLITDGGLHHQLAASGNFGAVV 344

Query: 273 --LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                   AT +       A V G  C   D   +       ++GD ++      Y  + 
Sbjct: 345 RRNYPLAIATKFDAPAVEVANVVGCLCTPLDRLADKAELPRAEVGDLVAVFCAGAYGASA 404

Query: 331 KN-WFNGINMPTIAVK 345
               F G       + 
Sbjct: 405 SPMHFLGQGPALEILV 420


>gi|285017513|ref|YP_003375224.1| diaminopimelate decarboxylase [Xanthomonas albilineans GPE PC73]
 gi|283472731|emb|CBA15236.1| hypothetical diaminopimelate decarboxylase protein [Xanthomonas
           albilineans]
          Length = 403

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 53/371 (14%), Positives = 105/371 (28%), Gaps = 30/371 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            Y+ D   L  +  T       AG +L  A K  A   +  TL  ++DG  ++S  E+  
Sbjct: 27  AYVYDLAALHAHASTLRTQLP-AGCELFYAAKANAEPPLLRTLAPWVDGFEAASGGELQW 85

Query: 66  GHEKFGGETHAY-NVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
            H    G T  +      D E+          +   ++S+L +    A    + + + + 
Sbjct: 86  LHHHQPGRTLLFGGPGKLDAELQLATILPHCSVHVESLSELQRLAHIAASASRLVSVFLR 145

Query: 124 PSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNNCENKSFLC 174
            +++                             +   +S    ++G  FH     +    
Sbjct: 146 LNIAAPDMPDTRLVMGGRPSPFGLDLLDLDAALRLLRDSPALRLDGFHFHLMSHQRDAQV 205

Query: 175 FSAMLKNIEK----EFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYS 226
              ++ +  +        +      ++ GGG           +    FC  L      + 
Sbjct: 206 HLRLIAHYLQTVQGWRQTYALGPLTVNAGGGFGVDYAAPEASFDWAAFCAGLPPLLRAHG 265

Query: 227 V--QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYP 283
              ++ LEPG  +          VLDI  +      +      H         +      
Sbjct: 266 TDLRLRLEPGRYVSAACGWYLMEVLDIKRSHGAYFAIGRGGTHHFRTPAAQGHDHPFRVL 325

Query: 284 NTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNG 336
                         + G+ C   D+         +  GD ++F     Y  N  +  F  
Sbjct: 326 RGTQAPMLCDAQVTLVGQLCTPKDVLARAQPVAALAPGDCLAFSLAGAYAWNISHQQFLM 385

Query: 337 INMPTIAVKNV 347
              P +   + 
Sbjct: 386 HPPPHMLFLDS 396


>gi|209964337|ref|YP_002297252.1| diaminopimelate decarboxylase, putative [Rhodospirillum centenum
           SW]
 gi|209957803|gb|ACI98439.1| diaminopimelate decarboxylase, putative [Rhodospirillum centenum
           SW]
          Length = 422

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 58/373 (15%), Positives = 119/373 (31%), Gaps = 30/373 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYM-DGTTSSS 59
            TP Y+    ++L NL       ++ G    +  A+K      +   +      G  + S
Sbjct: 49  GTPAYVYSGPRVLENLRRLKAALESTGLPHAIRYAMKANRHGPLLTWMKASGLCGIDACS 108

Query: 60  LYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHK 116
             E+    +  F  E  +Y          AVL+      +  +++S L +    +     
Sbjct: 109 PNELRFAVQCGFRPEEVSYTATSVSEADLAVLARHPETWVNADSLSTLRRLAAVSPGREI 168

Query: 117 KIGLRINPSVSYSKFILADPNRP-FSRLGEKCKDKIESEIKN------VNGLMFHNNCEN 169
            I +     V Y +  L   +    S+ G       E+          V G+ FH     
Sbjct: 169 GIRVNPALGVGYGENQLLRYSGERTSKFGIYRDRFEEALALAASHGLTVRGIHFHVGWGY 228

Query: 170 KSFLCFSAMLKNIEK-EFGHFITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFSEK 224
            +    +      E   F   + Q   ++LGGG+            ++ +   +++    
Sbjct: 229 LNAQLPAWAEVVRECLWFLDRVPQARLVNLGGGLGVPHAAGDRPLDLEAWAAVIRDSFAG 288

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH--------VP----DY 272
             +++++EPG+ +V +   L      +        +                +P      
Sbjct: 289 RGIEVWVEPGDYVVKDAGVLLLQANTVERKRATTFVGVDGGFNLAVEPVFYRLPCEPVPA 348

Query: 273 LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
            L+Q+ A  +         + G    A D++ E      V+ GD I+F +  GY     +
Sbjct: 349 RLHQDPARAWAADALAPVSIAGNINEALDLWAEALPFPAVEEGDVIAFLNAGGYAAAMGS 408

Query: 333 WFNGINMPTIAVK 345
                   +  + 
Sbjct: 409 NHCMRAQASEHLL 421


>gi|288958285|ref|YP_003448626.1| ornithine decarboxylase [Azospirillum sp. B510]
 gi|288910593|dbj|BAI72082.1| ornithine decarboxylase [Azospirillum sp. B510]
          Length = 427

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 54/368 (14%), Positives = 106/368 (28%), Gaps = 27/368 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA------GVKLLLALKCFAAWGMFDTLNQYMD-GTTS 57
           P + I    L +  D+ L     A      G  +L A+KC     +   L          
Sbjct: 46  PMHCIRPGVLADTADSFLAAFTEAADAVGRGGDVLYAVKCNPEPAVLRALWAGGVRHFDV 105

Query: 58  SSLYEVMLGHEKFGGETHAYNV---AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114
           +S  E+ L  + F      Y       +              + ++  +L K  +++   
Sbjct: 106 ASPGEIRLIRQMFPDAVLHYMHPVKGRQAIRNAYHQYGVRDFVLDSQEELTKILEESGNA 165

Query: 115 HKKIG-LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFL 173
                 +R+      + + L+           +      +    V GL FH   +     
Sbjct: 166 ADLGLVIRLALPKGNAVYDLSGKFGASLTDAVELLRAARAVAPKV-GLSFHVGSQMLDPS 224

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD-------YPVKDFCQRLKEFSEKYS 226
            +   +             I+ + +GGG   +            +    + +        
Sbjct: 225 AYERAIALAGYVIAESGVAIDMLDVGGGFPVSYPGVTPPPLGDFMAAIARGVASIDLPSH 284

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS------VEAHVPDYLLYQESAT 280
            +++ EPG A+V    +L   V+    +   +            V        L +    
Sbjct: 285 CRLWCEPGRALVAPGVSLVVQVVKRRGDELFINDGVYGALSDAGVPGFRFPARLIRPFEA 344

Query: 281 IYPNTGPYTAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
           +  + G       G +C + D   G F     VK GD I    +  Y    +  FNG + 
Sbjct: 345 M-GDNGEAAFSFYGPTCDSADKMAGPFILPADVKAGDWIELGQLGAYGSCLRTAFNGFDQ 403

Query: 340 PTIAVKNV 347
             +   + 
Sbjct: 404 ARVVEVSD 411


>gi|66045783|ref|YP_235624.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2
           [Pseudomonas syringae pv. syringae B728a]
 gi|63256490|gb|AAY37586.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2
           [Pseudomonas syringae pv. syringae B728a]
          Length = 397

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 51/356 (14%), Positives = 106/356 (29%), Gaps = 34/356 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVM 64
           +Y +D + +  N              +L A+K      + + L+Q        +SL EV 
Sbjct: 42  FYTVDPRWITQNAQQFSGCFPGT---VLYAMKANPLVHVLEALSQGGINHFDVASLAEVQ 98

Query: 65  LGHEKFGGETHAYNVAYKDCEI---DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
             H              K               + + ++  +L+K +D   +    I + 
Sbjct: 99  TVHNTLPNAVQYLMNPVKSRHCLHEAYYRHGVRSFVLDSEEELSKLRDVLPERDSTISMF 158

Query: 122 INPSVSYSKFIL--ADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +  + S S  +            L  +   ++ +      GL FH   +      + A L
Sbjct: 159 VRYAPSESTAVYDLRGKFGASPALATQLVHQVAASTDWSLGLSFHVGSQAIEDGPWLAAL 218

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF------CQRLKEFSEKYSVQIYLEP 233
            + +         +  + +GGG      +            C+ ++       + +  E 
Sbjct: 219 DDADAIVRDTAQHVRHLDIGGGFPGNYLNSMGNTPDLVGRVCEHIQTSPTLKDLNLICEA 278

Query: 234 GEAIVTNTTTLNTTVLDISENIKNL-----------VIVDSSVEAHVPDYLLYQESATIY 282
           G  +V    +L   VL   E+                           D   Y       
Sbjct: 279 GRGLVYGGMSLFARVLSRREHSVFCGAGIFGGLLSAQQWLQFPARVWRDAAPYA------ 332

Query: 283 PNTGPYTAMVCGRSCLAGDIFG-EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
             +   T  + G +C + D     +     ++ GD + F+    Y+++ +  FNG 
Sbjct: 333 -GSAEATFNIFGPTCDSMDRLAFPYSLASDIREGDWLEFQSTGAYSVSLRTPFNGF 387


>gi|254375053|ref|ZP_04990533.1| hypothetical protein FTDG_01241 [Francisella novicida GA99-3548]
 gi|151572771|gb|EDN38425.1| hypothetical protein FTDG_01241 [Francisella novicida GA99-3548]
          Length = 416

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 57/385 (14%), Positives = 123/385 (31%), Gaps = 34/385 (8%)

Query: 4   TPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +P ++ID+  LL            +        ++K  +   +     +        S  
Sbjct: 28  SPCFIIDENALLERARLFQQAILNQYQNSIAAYSVKTQSLNTIIQKFYEVGFIPEVVSSD 87

Query: 62  EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           E       +              D  +   L     I  +   ++ +    A+KL+   K
Sbjct: 88  EFEQIQKLQLCDKSIIFNGPYKNDASLIKALQLNAMINCDHFDEILRIAKIAKKLNITAK 147

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGE----KCKDKIESEIKNVNGLMFHNNCENKSFL 173
           IGLR+  + +   +          +             +     + GL  H     +   
Sbjct: 148 IGLRVADNKTPQNWSRFGFALTDLQSNSDIFTTIDKIQQIANIQLAGLHCHIGTNIRDIS 207

Query: 174 ----CFSAMLKNIEKEFGHFITQIEWISLGGGIH-----------FTDKDYPVKDFCQRL 218
                   + +  E     +   +EWI LGGG+                 + ++ +   +
Sbjct: 208 RFTAMAKNIAELAETILTKYKLTLEWIDLGGGLAGISPTLSDKRLQPYNPFDLELYAATI 267

Query: 219 KEFSEKYSVQI------YLEPGEAIVTNTTTLNTT-VLDISENIKNLVIVDSSVEAHVPD 271
               ++Y  +         E G ++V  +  L TT V    +N     ++  +    +P 
Sbjct: 268 IAPLKEYLNKTNDKTKLIFELGRSLVDYSVALLTTIVGTREQNEDFQSLITDAGIHTIPT 327

Query: 272 YLLYQESATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
              Y+           +   ++ G SC+  D   +  F   ++ GD++  + V  YNI+R
Sbjct: 328 ISTYRHPIYHLKTDSYHKKTLLLGPSCMQHDFLHDDIFLPKLEYGDKLLIDGVGAYNISR 387

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIR 355
            N F     P++ + + +   + +R
Sbjct: 388 NNEFI-HLKPSVILIDKNQQYQVLR 411


>gi|290991901|ref|XP_002678573.1| ornithine decarboxylase [Naegleria gruberi]
 gi|284092186|gb|EFC45829.1| ornithine decarboxylase [Naegleria gruberi]
          Length = 543

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 52/425 (12%), Positives = 117/425 (27%), Gaps = 94/425 (22%)

Query: 6   YYLIDKQKLLNNLDTALYIR------------KNAGVKLLLALKCFAAWGMFDTLNQYMD 53
           ++++D   ++  ++                   + GV+   A+KC     +   L     
Sbjct: 111 FFVVDLSHIVRQIERWRKAMTIYPKDQQKIEIDDRGVRPFYAVKCNPNENIVKVLYMMGC 170

Query: 54  GTTSSSLYEVMLGHEK-----------------------------------FGGETHAYN 78
           G   +S  E+ L  E                                      G    + 
Sbjct: 171 GFDCASEAEIALVCETCKEVDTWLENNQQFYESLTIVNPDPSLEQIKNRRFVPGRDIIFA 230

Query: 79  VAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADP 136
              K             +    ++V ++ K  +  +     I ++ + S +   F     
Sbjct: 231 HPCKQISHMEYAAKVGVELTTLDSVCEIEKIAEHWKAAKCVIRIKTDDSHATVGFSAKFG 290

Query: 137 NRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQI 193
              F +      +K ++   N+ G+ FH          +   L++  +       +  ++
Sbjct: 291 CSKFGQ--TILLEKAKALGVNIYGISFHVGTNCSDTNSYKKALQDAAELAKLAIKYGYKL 348

Query: 194 EWISLGGGIHFTDKDYPVKDFCQ------------------RLKEFSEKYSVQIYLEPGE 235
             I +GGG      D    +                           +  ++++  EPG 
Sbjct: 349 SLIDIGGGFMGRINDENPMETVASQIVPEIQKLFLRDESTNADDSIIDPKTIKLIAEPGR 408

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY--------------QESATI 281
            IV+ + TL   V  + +       +         D++ Y                   +
Sbjct: 409 YIVSASHTLVCNVHTVKDMRLENEQLKKEGIPTPDDFIYYLNDGIYGSFNNIVFDYVHLV 468

Query: 282 YP--------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                     +   Y + + G +C + D     +    +  GD + F +   Y     + 
Sbjct: 469 VNMIMSKSTKHEKKYASTLFGPTCDSLDCLSRGYPLPELHAGDYLFFNNFGAYTTAAASD 528

Query: 334 FNGIN 338
           FNG+ 
Sbjct: 529 FNGMR 533


>gi|332678981|gb|AEE88110.1| Diaminopimelate decarboxylase [Francisella cf. novicida Fx1]
          Length = 417

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 57/385 (14%), Positives = 123/385 (31%), Gaps = 34/385 (8%)

Query: 4   TPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +P ++ID+  LL            +        ++K  +   +     +        S  
Sbjct: 28  SPCFIIDENALLERARLFQQAILNQYQNSIAAYSVKTQSLNTIIQKFYEVGFIPEVVSSD 87

Query: 62  EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           E       +              D  +   L     I  +   ++ +    A+KL+   K
Sbjct: 88  EFEQIQKLQLCDKSIIFNGPYKNDASLIKALQLNAMINCDHFDEILRIAKIAKKLNITAK 147

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGE----KCKDKIESEIKNVNGLMFHNNCENKSFL 173
           IGLR+  + +   +          +             +     + GL  H     +   
Sbjct: 148 IGLRVADNKTPQNWSRFGFALTDLQSNSDIFTTIDKIQQIANIQLAGLHCHIGTNIRDIS 207

Query: 174 ----CFSAMLKNIEKEFGHFITQIEWISLGGGIH-----------FTDKDYPVKDFCQRL 218
                   + +  E     +   +EWI LGGG+                 + ++ +   +
Sbjct: 208 RFTAMAKNIGELAETILTKYKLTLEWIDLGGGLAGISPTLSDKRLQPYNPFDLELYAATI 267

Query: 219 KEFSEKYSVQI------YLEPGEAIVTNTTTLNTT-VLDISENIKNLVIVDSSVEAHVPD 271
               ++Y  +         E G ++V  +  L TT V    +N     ++  +    +P 
Sbjct: 268 IAPLKEYLNKTNDKTKLIFELGRSLVDYSVALLTTIVGTREQNEDFQSLITDAGIHTIPT 327

Query: 272 YLLYQESATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
              Y+           +   ++ G SC+  D   +  F   ++ GD++  + V  YNI+R
Sbjct: 328 ISTYRHPIYHLKTDSYHKKTLLLGPSCMQHDFLHDDIFLPKLEYGDKLLIDGVGAYNISR 387

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIR 355
            N F     P++ + + +   + +R
Sbjct: 388 NNEFI-HLKPSVILIDKNQQYQVLR 411


>gi|242045460|ref|XP_002460601.1| hypothetical protein SORBIDRAFT_02g031650 [Sorghum bicolor]
 gi|241923978|gb|EER97122.1| hypothetical protein SORBIDRAFT_02g031650 [Sorghum bicolor]
          Length = 426

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 55/362 (15%), Positives = 113/362 (31%), Gaps = 28/362 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +K+ + +++  +++          K  GV    A+KC     +   L     G   +S  
Sbjct: 51  VKSAFSVLNLGEVVELFAAWRRGLK--GVPPYYAVKCNTNPALLGALAALGAGFDCASPA 108

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+          +   Y    K             D   F++V +++K +    +    +
Sbjct: 109 EMDAVLALGVTADRIIYANPCKPEAHIEHAARVGVDLTTFDSVEEVDKLRRFHPRCRLLL 168

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
            L++  +   +++ L                  +S    V+G+ FH          + A 
Sbjct: 169 RLKVPDAGDAARWDLGTKYGARQEEVAPLLRAAQSAGLAVSGVAFHVGSAVSRVGVYDAA 228

Query: 179 LKNIEKEFG----HFITQIEWISLGGGI----HFTDKDYPVKDFCQRLKEFSEKYSVQIY 230
           ++     F       +  +  + +GGG       T +D          + F +   +Q+ 
Sbjct: 229 VEAARAVFDAAAARGMPPMRILDIGGGFMAGAASTFQDACDVINSALTRHFGDVPGLQVI 288

Query: 231 LEPGEAIVTNTTTLNTTVLD-----------ISENIKNLVIVDSSVEAHVPDYLLYQESA 279
            EPG        TL   V             I +     +              +   +A
Sbjct: 289 GEPGRYFAETPFTLAARVFGKRARGEVREYWIDDGFYGTLCCVHVENYVPRPVPVSSRAA 348

Query: 280 TIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                 G     + + V G +C + D+  + +    ++IGD + F +V  Y       FN
Sbjct: 349 AGDDEGGESDETHPSTVFGPTCDSLDVVVKGYHLPELRIGDWLVFHEVGAYTTVLSCNFN 408

Query: 336 GI 337
           G 
Sbjct: 409 GF 410


>gi|289811717|ref|ZP_06542346.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 330

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 48/326 (14%), Positives = 95/326 (29%), Gaps = 36/326 (11%)

Query: 72  GETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSK 130
            +   +     D    A +S     +   +V  L +    +     ++ LR+NP   +  
Sbjct: 4   PDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRVWLRVNPGFGHGH 61

Query: 131 FILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
               +     S+ G    D   +          + G+  H                 + +
Sbjct: 62  SQKTNTGGENSKHGIWHSDLPAALAVMQKYRLKLVGIHMHIGSGVDYGHLEQVCGAMVRQ 121

Query: 185 EFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE-KYSVQIYLEPG 234
                   +E IS GGG+               Y       R +      ++V++ +EPG
Sbjct: 122 VL-ECGQDVEAISAGGGLSIPYHEGEEPVDTRHYYGLWNAAREQIARHLGHAVKLEIEPG 180

Query: 235 EAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES--------ATIYPNT 285
             +V  +  L T V  +     ++ V+VD+     +   +                  N 
Sbjct: 181 RYLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHRISALAADGRALENG 240

Query: 286 GPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
                +V G  C +GD+F        E      V  GD +   D   Y  +  + +N   
Sbjct: 241 PWVETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAYGASMSSNYNSRP 300

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364
           +    + +        R  +  +   
Sbjct: 301 LLPEVLFDNGQARLIRRRQTIEELLA 326


>gi|237709819|ref|ZP_04540300.1| carboxynorspermidine decarboxylase [Bacteroides sp. 9_1_42FAA]
 gi|229455912|gb|EEO61633.1| carboxynorspermidine decarboxylase [Bacteroides sp. 9_1_42FAA]
          Length = 212

 Score =  132 bits (333), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 3/204 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + +P Y++D+  L  NL     +   AGV+++LA K FA W  F    +Y+  TT+SS+Y
Sbjct: 7   VPSPCYVMDEALLRKNLSLIKSVADRAGVEIILAFKSFAMWKSFSVFREYIRYTTASSVY 66

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIG 119
           E  L +E+FG + H Y+ AY D +   ++     I FN+ SQ  +F    KA       G
Sbjct: 67  EARLAYEEFGSKAHTYSPAYTDTDFPVIMQCSSHITFNSFSQFRRFYPMVKASGEKISCG 126

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +RINP  S  +  L +P  P +R G       E+  + + G   H +CE+ S+      L
Sbjct: 127 IRINPEYSEVEVELYNPCAPGTRFGVTADLLPETLPEGIEGFHCHCHCESSSYE-LEHTL 185

Query: 180 KNIEKEFGHFITQIEWISLGGGIH 203
           ++IE+ F  +  QI+ +  G G  
Sbjct: 186 QHIEETFARWFPQIKMVEFGRGAP 209


>gi|145579900|pdb|2NV9|A Chain A, The X-Ray Crystal Structure Of The Paramecium Bursaria
           Chlorella Virus Arginine Decarboxylase
 gi|145579901|pdb|2NV9|B Chain B, The X-Ray Crystal Structure Of The Paramecium Bursaria
           Chlorella Virus Arginine Decarboxylase
 gi|145579902|pdb|2NV9|C Chain C, The X-Ray Crystal Structure Of The Paramecium Bursaria
           Chlorella Virus Arginine Decarboxylase
 gi|145579903|pdb|2NV9|D Chain D, The X-Ray Crystal Structure Of The Paramecium Bursaria
           Chlorella Virus Arginine Decarboxylase
 gi|145579904|pdb|2NV9|E Chain E, The X-Ray Crystal Structure Of The Paramecium Bursaria
           Chlorella Virus Arginine Decarboxylase
 gi|145579905|pdb|2NV9|F Chain F, The X-Ray Crystal Structure Of The Paramecium Bursaria
           Chlorella Virus Arginine Decarboxylase
 gi|145579906|pdb|2NV9|G Chain G, The X-Ray Crystal Structure Of The Paramecium Bursaria
           Chlorella Virus Arginine Decarboxylase
 gi|145579907|pdb|2NV9|H Chain H, The X-Ray Crystal Structure Of The Paramecium Bursaria
           Chlorella Virus Arginine Decarboxylase
          Length = 372

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 56/359 (15%), Positives = 111/359 (30%), Gaps = 40/359 (11%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+   + + + +D    +     V    A+KC     +  T+         +S  E+  
Sbjct: 19  FYVSSPKIVEDLIDQWTILFPR--VTPHYAVKCNNDEVLLKTMCDKNVNFDCASSSEIKK 76

Query: 66  GHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
             +         +    K  D  I A     D   F++  +L+K        + K+ LRI
Sbjct: 77  VIQIGVSPSRIIFAHTMKTIDDLIFAKDQGVDIATFDSSFELDKIHT--YHPNCKMILRI 134

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
                 +   L +             +  +     V G+ FH    +++   +   +K+ 
Sbjct: 135 RCDDPNAAVQLGNKFGANEDEIRHLLEYAKQLDIEVIGISFHVGSGSRNPEAYYRAIKSS 194

Query: 183 EKEFGH---FITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSEKYSVQIYLEPG 234
           ++ F        +   + +GGG+H    +     Y        +K+F  + +V I  EPG
Sbjct: 195 KEAFNEAISVGHKPYILDIGGGLHADIDEGELSTYMSDYINDAIKDFFPEDTVTIVAEPG 254

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA----------------HVPDYLLYQES 278
                + + L T V+             +                     + D    +E 
Sbjct: 255 RFFAEHYSVLATQVIGKRVRDGLYEYFFNESTYGGFSNVIFEKSVPTPQLLRDVPDDEEY 314

Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                      +++ G +C   D+         + IGD + F     Y       FNG 
Sbjct: 315 ---------VPSVLYGCTCDGVDVINHNVALPELHIGDWVYFPSWGAYTNVLTTSFNGF 364


>gi|26353042|dbj|BAC40151.1| unnamed protein product [Mus musculus]
          Length = 448

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 55/371 (14%), Positives = 110/371 (29%), Gaps = 31/371 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  K++        +     +K    +KC +   + + L     G   SS  E+ L
Sbjct: 40  FFVGDLGKIVKKHSQWQTVVAQ--IKPFYTVKCNSTPAVLEILAALGTGFACSSKNEMAL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             E     E   +    K        +     I    +++   K      + K+ L I  
Sbjct: 98  VQELGVSPENIIFTSPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             +              +      +  +     + G+ FH +   K +  +   L +   
Sbjct: 158 EDNIGGEDGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKEYQVYVHALSDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
            F   G F   +  + +GGG   T+   ++            F E   +QI  EPG   V
Sbjct: 218 VFDMAGEFGFTMNMLDIGGGFTGTEIQLEEVNHVISPLLDIYFPEGSGIQIISEPGSYYV 277

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE--------------------- 277
           ++  TL   ++       +                +Y                       
Sbjct: 278 SSAFTLAVNIIAKKVVENDKFSSGVEKNGSDEPAFVYYMNDGVYGSFASKLSEDLNTIPE 337

Query: 278 -SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                  +   +T+ + G SC   D   E      + +GD + F+++   + +  + FN 
Sbjct: 338 VHKKYKEDEPLFTSSLWGPSCDELDQIVEGCLLPELNVGDWLIFDNMGADSFHEPSAFND 397

Query: 337 INMPTIAVKNV 347
              P I     
Sbjct: 398 FQRPAIYFMMS 408


>gi|1702874|emb|CAA64451.1| ornithine decarboxylase [Candida albicans]
          Length = 470

 Score =  132 bits (332), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 59/382 (15%), Positives = 119/382 (31%), Gaps = 53/382 (13%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  +++N+++          V+   A+KC +   +  TL++       +S  E+ L
Sbjct: 77  FFVCDLGEIINSVNQWQQSL--PMVQPYYAVKCNSNPQILTTLSELGVNFDCASKNEIDL 134

Query: 66  GHEKF---GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                     E   Y    K        +N +  +    +    +K      H KI +R+
Sbjct: 135 VLSLGIHQAHERIIYANPCKTNSFIRHAANENVNLTTVDNVHELYKLAKFHPHCKILIRL 194

Query: 123 NPSVSYSKFILADPNRPF--SRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
               S ++  L+        + +GE      +     V+G+ FH     K F      +K
Sbjct: 195 ITDDSTAQCQLSTKFGCDLNTAIGEILPKA-KELSLQVHGVAFHVGSGAKDFSSIYQAIK 253

Query: 181 NIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS-----EKYSVQIYLE 232
           +    F          + + +GGG          +     L++F      +   ++   E
Sbjct: 254 DSRILFDEMLSMGFTPKLLDIGGGFERETFPQSSQMVKFALEKFFPIEFSQSNEIKFIAE 313

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------------------AHVPDY 272
           PG  +V N  TL T ++   +        ++ +                      H    
Sbjct: 314 PGRFMVANAFTLITHIIARRDLPTGGNNHNNDMTPSAMLYINDGVYGNLNCILFDHQTPK 373

Query: 273 LLYQESATIYPNTGP----------------YTAMVCGRSCLAGDIFGEFHFEKP-VKIG 315
           +    +                         +   + G +C   D           V++G
Sbjct: 374 VYVLTNENQLFYKQEMMRSLSVNNNNNKTDGFKFSIWGPTCDGLDCVSSLAKLSKNVQVG 433

Query: 316 DRISFEDVAGYNINRKNWFNGI 337
           D + FE+V  Y       FNG+
Sbjct: 434 DWLFFENVGAYTSCASTKFNGL 455


>gi|291542522|emb|CBL15632.1| Diaminopimelate decarboxylase [Ruminococcus bromii L2-63]
          Length = 392

 Score =  132 bits (332), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 66/384 (17%), Positives = 129/384 (33%), Gaps = 36/384 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KT +Y+ D + L + +     +     V +  A+K      +   L   +D     S  E
Sbjct: 9   KTAFYVFDVKTLKDRVAYLRKMLPE-DVAICYAIKANTF--ITAELENDVDRFEICSPGE 65

Query: 63  VMLG-HEKFGGETHAYNVAYKDC----EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             +        +    +  YK       + A           +++Q N F++ ++K  KK
Sbjct: 66  AEICDLLDIPDKMMVISGVYKTPEVMKNMVANGKCDRIFTVESLTQFNLFRELSEKYKKK 125

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
           I L +           +        + E    + E E  ++ G+ F +  +  S      
Sbjct: 126 ISLLLRL------TNGSQFGINSDEIEEIISKRNEFEYLDILGIQFFSGTQKTSLKKLKR 179

Query: 178 MLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-----KYSVQ 228
            +  ++         +    E +  G G   T       +  + +  F++         +
Sbjct: 180 EIDKLDNLLILLKEKYDYTAEELEYGTGFPATYFKEDTINEDELIGGFAQLLNEMTSKPK 239

Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN---- 284
           I LE G +I        T ++D   N     ++      H+      Q  A   P     
Sbjct: 240 ITLELGRSIAAICGKYYTHIVDKKCNKGENYLLVDGGMNHI--VYYGQHMAMKQPYLSVC 297

Query: 285 -----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGIN 338
                    +  +CG  C   DI  +      ++IGD I FE+   Y +    + F   +
Sbjct: 298 GKETEPCTESWNICGSLCSMNDIIAKQISLPDIEIGDVICFENTGAYCMTEGISLFLSRD 357

Query: 339 MPTIAVKNVDGTIKAIREFSYNDY 362
           +P++ +K  DGT   +R  S+  +
Sbjct: 358 IPSVYIKKEDGTYLCVR-DSFETF 380


>gi|9055298|ref|NP_061215.1| antizyme inhibitor 1 [Mus musculus]
 gi|156255200|ref|NP_001095928.1| antizyme inhibitor 1 [Mus musculus]
 gi|13431735|sp|O35484|AZIN1_MOUSE RecName: Full=Antizyme inhibitor 1; Short=AZI; AltName:
           Full=Ornithine decarboxylase antizyme inhibitor
 gi|183448303|pdb|3BTN|A Chain A, Crystal Structure Of Antizyme Inhibitor, An Ornithine
           Decarboxylase Homologous Protein
 gi|183448304|pdb|3BTN|B Chain B, Crystal Structure Of Antizyme Inhibitor, An Ornithine
           Decarboxylase Homologous Protein
 gi|2645701|gb|AAB87464.1| antizyme inhibitor [Mus musculus]
 gi|26340414|dbj|BAC33870.1| unnamed protein product [Mus musculus]
 gi|26353728|dbj|BAC40494.1| unnamed protein product [Mus musculus]
 gi|27882604|gb|AAH43722.1| Antizyme inhibitor 1 [Mus musculus]
 gi|148676850|gb|EDL08797.1| antizyme inhibitor 1 [Mus musculus]
          Length = 448

 Score =  132 bits (332), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 55/371 (14%), Positives = 110/371 (29%), Gaps = 31/371 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  K++        +     +K    +KC +   + + L     G   SS  E+ L
Sbjct: 40  FFVGDLGKIVKKHSQWQTVVAQ--IKPFYTVKCNSTPAVLEILAALGTGFACSSKNEMAL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             E     E   +    K        +     I    +++   K      + K+ L I  
Sbjct: 98  VQELGVSPENIIFTSPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             +              +      +  +     + G+ FH +   K +  +   L +   
Sbjct: 158 EDNIGGEDGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKEYQVYVHALSDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
            F   G F   +  + +GGG   T+   ++            F E   +QI  EPG   V
Sbjct: 218 VFDMAGEFGFTMNMLDIGGGFTGTEIQLEEVNHVISPLLDIYFPEGSGIQIISEPGSYYV 277

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE--------------------- 277
           ++  TL   ++       +                +Y                       
Sbjct: 278 SSAFTLAVNIIAKKVVENDKFSSGVEKNGSDEPAFVYYMNDGVYGSFASKLSEDLNTIPE 337

Query: 278 -SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                  +   +T+ + G SC   D   E      + +GD + F+++   + +  + FN 
Sbjct: 338 VHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSFHEPSAFND 397

Query: 337 INMPTIAVKNV 347
              P I     
Sbjct: 398 FQRPAIYFMMS 408


>gi|149964|gb|AAA25361.1| diaminopimelate decarboxylase [Mycobacterium tuberculosis str.
           Erdman]
          Length = 446

 Score =  132 bits (332), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 46/353 (13%), Positives = 103/353 (29%), Gaps = 44/353 (12%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ID+    +           +G  +  A K F    +   +++        +  E
Sbjct: 39  GTPLFVIDEDDFRSRCRETAAAF-GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGE 97

Query: 63  VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F  E    +   K       AV +    I+ ++++++ +    A +    + 
Sbjct: 98  LAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQD 157

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGE---------KCKDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G            +    ++   + GL  H   +
Sbjct: 158 VLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQ 217

Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F          +    G F  +    I  + LGGG+  +            L  
Sbjct: 218 IFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAA 277

Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS----- 264
                           + ++ +EPG AI    T     V  + +   +            
Sbjct: 278 KLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDG 337

Query: 265 -VEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPV 312
            +  ++   L   +      +   +  P  A + G+ C +GDI     +   +
Sbjct: 338 GMSDNIRTGLYGAQYDVRLVSRVSDAPPVPARLVGKHCESGDIIVRDTWVPTI 390


>gi|66474038|gb|AAY46598.1| BCG hsp60-lysA chimera [Shuttle vector pCB112-Edim6]
 gi|66474042|gb|AAY46601.1| hsp60-lysA chimera [Shuttle vector pCB119-Edim6]
 gi|77632628|gb|ABB00292.1| BCG hsp60-lysA chimaera [Shuttle vector pCB112-HPV11-L1]
          Length = 455

 Score =  132 bits (332), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 46/353 (13%), Positives = 103/353 (29%), Gaps = 44/353 (12%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ID+    +           +G  +  A K F    +   +++        +  E
Sbjct: 48  GTPLFVIDEDDFRSRCRETAAAF-GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGE 106

Query: 63  VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F  E    +   K       AV +    I+ ++++++ +    A +    + 
Sbjct: 107 LAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQD 166

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGE---------KCKDKIESEIKNVNGLMFHNNCE 168
           + +R+   V               + G            +    ++   + GL  H   +
Sbjct: 167 VLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQ 226

Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F          +    G F  +    I  + LGGG+  +            L  
Sbjct: 227 IFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAA 286

Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS----- 264
                           + ++ +EPG AI    T     V  + +   +            
Sbjct: 287 KLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDG 346

Query: 265 -VEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPV 312
            +  ++   L   +      +   +  P  A + G+ C +GDI     +   +
Sbjct: 347 GMSDNIRTGLYGAQYDVRLVSRVSDAPPVPARLVGKHCESGDIIVRDTWVPTI 399


>gi|22507525|gb|AAH19412.1| Antizyme inhibitor 1 [Mus musculus]
          Length = 448

 Score =  132 bits (332), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 55/371 (14%), Positives = 110/371 (29%), Gaps = 31/371 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  K++        +     +K    +KC +   + + L     G   SS  E+ L
Sbjct: 40  FFVGDLGKIVKKHSQWQTVVAQ--IKPFYTVKCNSTPAVLEILAALGTGFACSSKNEMAL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             E     E   +    K        +     I    +++   K      + K+ L I  
Sbjct: 98  VQELGVSPENIIFTSPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             +              +      +  +     + G+ FH +   K +  +   L +   
Sbjct: 158 EDNIGGEDGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKEYQVYVHALSDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
            F   G F   +  + +GGG   T+   ++            F E   +QI  EPG   V
Sbjct: 218 VFDMAGEFGFTMNMLDIGGGFTGTEIQLEEVNHVISPLLDIYFPEGSGIQIISEPGSYYV 277

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE--------------------- 277
           ++  TL   ++       +                +Y                       
Sbjct: 278 SSAFTLAVNIIAKKVVENDKFSSGVEKNGSDEPAFVYYMNDGVYGSFASKLSEDLNTIPE 337

Query: 278 -SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                  +   +T+ + G SC   D   E      + +GD + F+++   + +  + FN 
Sbjct: 338 VHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSFHEPSAFND 397

Query: 337 INMPTIAVKNV 347
              P I     
Sbjct: 398 FQRPAIYFMMS 408


>gi|123410961|ref|XP_001303794.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain
           containing protein [Trichomonas vaginalis G3]
 gi|121885199|gb|EAX90864.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain
           containing protein [Trichomonas vaginalis G3]
          Length = 398

 Score =  132 bits (332), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 56/373 (15%), Positives = 120/373 (32%), Gaps = 27/373 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            T  +L D  ++    +          +K   A+KC     +   L  +  G   +S  E
Sbjct: 30  DTAIWLADMNRVRYCANLWEAYL--PKIKAHYAMKCCDEPNLLKFLADHGFGFDCASKKE 87

Query: 63  VMLGHE--KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           + +  +          ++   K+ E    A     + ++F+T  +L K          ++
Sbjct: 88  IEVITQDLGVDANRIVFSHPLKNKEAILYAKEVGVERMVFDTEEELRKI--LRFYPEAEV 145

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE---NKSFLCF 175
            LR+ P  S +K  L+                      N  G  FH   +     +F   
Sbjct: 146 YLRVKPKFSNAKIPLSKKYGAPPEDVPNLLQLASELGANFIGFSFHVGSQCDDINTFRQV 205

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQI 229
              +  ++ +       + +I +GGG +                    + EF  +  ++ 
Sbjct: 206 FQYVAELKVKAEELGLNVCFIDIGGGFYPPHAPANNSFKEITETINNAIDEFFGENEIEF 265

Query: 230 YLEPGEAIVTNTTTLNTTV----------LDISENIKNLVIVDSSVEAHVPDYLLYQESA 279
             EPG    +    L   V           + +++I     +  +  + + D+       
Sbjct: 266 VGEPGRFFASEYMDLILPVTCAKIHEDDHGERTQSIYIPDGIYGAFNSIIYDHNNPHFEI 325

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
               ++      + G++C + DI  E      +++GD +     + Y  +   +FNG + 
Sbjct: 326 HTEGDSEKLPTTIWGQTCDSADIVYEDMMWPELEVGDLLIVRRFSAYTYSPTAFFNGFHH 385

Query: 340 PTIAVKNVDGTIK 352
             + V N D    
Sbjct: 386 HPVVVLNKDEDDI 398


>gi|260905831|ref|ZP_05914153.1| diaminopimelate decarboxylase [Brevibacterium linens BL2]
          Length = 497

 Score =  132 bits (331), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 57/396 (14%), Positives = 106/396 (26%), Gaps = 42/396 (10%)

Query: 3   KTPYY-LIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP   LID   +             A  V   +A K      +  +  +   G   +S 
Sbjct: 74  GTPVIGLIDLDHIAETYALLTSAFSGAADVLHAVACKAVPLQPLLRSYAEAGAGCEVASP 133

Query: 61  YEVMLGH-EKFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHK 116
            E+ L     F  E   + + A    E+   +    ++  +   +L +            
Sbjct: 134 GELELALSAGFSPEAIVFDSPAKTWTELRRAVDLGVSMNIDNFDELERLDVLLTGHTTSA 193

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170
           ++G+RINP                S+ G    D       IE+ +        H +  ++
Sbjct: 194 RVGIRINPQSGTGTIGALSTATQTSKFGIGLADPGARDELIEAYLSRPWLNQIHVHSGSQ 253

Query: 171 SFL----------CFSAMLKNIEKEFGHFITQ--IEWISLGGGIHFTDKDYPVKDFCQRL 218
                              +  E           I  I +GGG+        +       
Sbjct: 254 GISLDQAAAGIETVVDLAKEVNELAAQKHGRDRQITRIDIGGGLPVNFSGEEITPTFAEY 313

Query: 219 KEFSEK-----YSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDY 272
           +   E      +   +  E G A++    T  T V        + + +  + V+      
Sbjct: 314 RAVLEARVPELFDFDLVTEFGRALLAKAGTTLTHVEYAKTTGGRRIAMTHAGVQVATRTA 373

Query: 273 LLYQESATIYPNTGPY---------TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323
               +         P             V G +C AGD+         +  GD ++  D 
Sbjct: 374 YAPADWPLRILPFTPEGNPKTAEVVPTDVAGPACFAGDLLVRDRMLPRLDAGDIVAVPDT 433

Query: 324 AGYNINRKNWFNGINMPTIAVKN---VDGTIKAIRE 356
             Y  +    +N +    +              IR 
Sbjct: 434 GAYYFSNPFSYNLLPRVPVYGYRVQAETVEFSIIRR 469


>gi|16506287|ref|NP_443724.1| arginine decarboxylase [Homo sapiens]
 gi|24636807|sp|Q96A70|ADC_HUMAN RecName: Full=Arginine decarboxylase; Short=ADC; Short=ARGDC;
           AltName: Full=ODC-paralogue; Short=ODC-p; AltName:
           Full=Ornithine decarboxylase-like protein
 gi|14714623|gb|AAH10449.1| ADC protein [Homo sapiens]
 gi|15858863|gb|AAL08049.1| ornithine decarboxylase-like protein variant 1 [Homo sapiens]
 gi|24081047|gb|AAH28128.1| Arginine decarboxylase [Homo sapiens]
 gi|56202451|emb|CAI19354.1| arginine decarboxylase [Homo sapiens]
 gi|119627877|gb|EAX07472.1| arginine decarboxylase, isoform CRA_d [Homo sapiens]
 gi|119627886|gb|EAX07481.1| arginine decarboxylase, isoform CRA_d [Homo sapiens]
 gi|123982478|gb|ABM82980.1| arginine decarboxylase [synthetic construct]
 gi|123997145|gb|ABM86174.1| arginine decarboxylase [synthetic construct]
 gi|189055058|dbj|BAG38042.1| unnamed protein product [Homo sapiens]
          Length = 460

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 51/362 (14%), Positives = 118/362 (32%), Gaps = 37/362 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++       +++    V+   A+KC ++ G+   L Q   G + ++  E+ L
Sbjct: 41  FFVADLGAIVR--KHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 98

Query: 66  G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             H              K        +     + +  +++   K        K+ L I  
Sbjct: 99  VQHIGIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKMVLCIAT 158

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S+S   L+       +      +  +     V G+ FH          ++  + +   
Sbjct: 159 DDSHSLSCLSLKFGVSLKSCRHLLENAKKHHVEVVGVSFHIGSGCPDPQAYAQSIADARL 218

Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPGE 235
            F        ++  + LGGG   T+      +    +        F E   V I+ E G 
Sbjct: 219 VFEMGTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEGCGVDIFAELGR 278

Query: 236 AIVTNTTTLNTTVLDI-----------------------SENIKNLVIVDSSVEAHVPDY 272
             VT+  T+  +++                           +     I +S +  ++   
Sbjct: 279 YYVTSAFTVAVSIIAKKEVLLDQPGREEENGSTSKTIVYHLDEGVYGIFNSVLFDNICPT 338

Query: 273 LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
            + Q+  +       Y++ + G +    D   E  +   + +GD + F+++  Y +   +
Sbjct: 339 PILQKKPSTEQP--LYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNMGAYTVGMGS 396

Query: 333 WF 334
            F
Sbjct: 397 PF 398


>gi|208780272|ref|ZP_03247614.1| diaminopimelate decarboxylase [Francisella novicida FTG]
 gi|208743921|gb|EDZ90223.1| diaminopimelate decarboxylase [Francisella novicida FTG]
          Length = 416

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 56/386 (14%), Positives = 120/386 (31%), Gaps = 36/386 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +P ++ID+  LL            +        ++K  +   +     +        S  
Sbjct: 28  SPCFIIDENALLERARLFQQAILNQYQNSIAAYSVKTQSLNTIIQKFYEVGFIPEVVSSD 87

Query: 62  EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E       +              D  +   L     I  +   ++ +    A+KL+    
Sbjct: 88  EFEQIQKLQLCDKSIIFNGPYKNDASLIKALQLNAMINCDHFDEILRIAKIAKKLNITAK 147

Query: 120 LRINP-------SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF 172
           + +         + S   F L D                +     + GL  H     +  
Sbjct: 148 IGLRIADNKTPQNWSRFGFALTDQQNNSDIF-TTIDKIQQIANIQLAGLHCHIGTNIRDI 206

Query: 173 L----CFSAMLKNIEKEFGHFITQIEWISLGGGIH-----------FTDKDYPVKDFCQR 217
                    + +  E     +   +EWI LGGG+                 + ++ +   
Sbjct: 207 SRFTAMAKNIAELAETILTKYKLTLEWIDLGGGLAGISPTLSDKRLQPYNPFDLELYAAT 266

Query: 218 LKEFSEKYSVQI------YLEPGEAIVTNTTTLNTT-VLDISENIKNLVIVDSSVEAHVP 270
           +    ++Y  +         E G ++V  +  L TT V    +N     ++  +    +P
Sbjct: 267 IIAPLKEYLNKTNDKTKLIFELGRSLVDYSVALLTTIVGTREQNEDFQSLITDAGIHTIP 326

Query: 271 DYLLYQESATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
               Y+           +   ++ G SC+  D   +  F   ++ GD++  + V  YNI+
Sbjct: 327 TISTYRHPIYHLKTDSYHKKTLLLGPSCMQHDFLHDDIFLPKLEYGDKLLIDGVGAYNIS 386

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIR 355
           R N F     P++ + + +   + +R
Sbjct: 387 RNNEFI-HLKPSVILIDKNQQYQVLR 411


>gi|329941101|ref|ZP_08290380.1| decarboxylase [Streptomyces griseoaurantiacus M045]
 gi|329299632|gb|EGG43531.1| decarboxylase [Streptomyces griseoaurantiacus M045]
          Length = 472

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 57/387 (14%), Positives = 104/387 (26%), Gaps = 40/387 (10%)

Query: 8   LIDKQKLLNNLDTALYIRK-----NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           L+D   + N         +        V    A+K      +   L     G   +S  E
Sbjct: 58  LLDVTGIRNAAAELRAAFEAVLPPGTPVLHAFAVKASPLVPVVRLLRAAGIGAEVASAGE 117

Query: 63  VMLGHE-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--KI 118
           + L        E     + A    E+   L+    +  +   +L +     +       +
Sbjct: 118 LALARAAGVPPERTVLDSPAKTPAELREALALGIAVNADNPQELARIDALVRSAPTRSPL 177

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK--------IESEIKNVNGLMFHNNCE-- 168
           G+R+NP V              S+ G   +D           +E   +  L  H   +  
Sbjct: 178 GVRVNPQVGGGSIGALSTATTTSKFGVALRDAGAREWLLRAYAERPWLTRLHAHVGSQGI 237

Query: 169 --NKSFLCFSAMLKNIEKEFGHFIT-QIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
                      +    E+        Q++ + +GGG+              R      + 
Sbjct: 238 PPALMVRGLGEVYALAEEINRRAGRRQVDTLDIGGGLPVDFGSDASAPTYARYARLLAEA 297

Query: 226 -------SVQIYLEPGEAIVTNTTTLNTTVLDIS---------ENIKNLVIVDSSVEAHV 269
                     +  E G +++    TL   V              +    V   +    H 
Sbjct: 298 VPGLMDGRYGLVTEFGRSLLAKHGTLVARVEYTKAAGGRAVAVTHAGVQVATRTVYAPHA 357

Query: 270 PDYLLYQESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
               +        P  GP     V G +C AGD+  E      +  GD ++  D   Y+ 
Sbjct: 358 WPLRIAAYDTEGRPKEGPPVVQDVAGPACFAGDLLAEGRPLPELAPGDVVAAPDTGAYSF 417

Query: 329 NRKNWFNGINMPTIA-VKNVDGTIKAI 354
                +N +    +      DG     
Sbjct: 418 AHHYAYNSLPRVGVYGYVAEDGADGVR 444


>gi|85373776|ref|YP_457838.1| diaminopimelate/ornithine decarboxylase [Erythrobacter litoralis
           HTCC2594]
 gi|84786859|gb|ABC63041.1| diaminopimelate/ornithine decarboxylase [Erythrobacter litoralis
           HTCC2594]
          Length = 400

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 45/350 (12%), Positives = 87/350 (24%), Gaps = 21/350 (6%)

Query: 19  DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAY 77
             A +  +    K+L A+K   +  +   L          +S+ EV L  +        +
Sbjct: 30  RAARFFVEKFPGKVLYAVKANPSPDLLQILRASGVTHYDVASIAEVRLVRDALPDAVLCF 89

Query: 78  NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG---------LRINPSVSY 128
               K     A   +   +   ++    +     +      G         +RI  S  Y
Sbjct: 90  MHPVKTPRAIAEAYHQHGVRTFSLDTEEELAKIVEACSDAQGNPAKDLKLCVRIRVSSDY 149

Query: 129 SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH 188
           S+  LA                       + G+ FH   +  +   +   ++ +      
Sbjct: 150 SELSLASKFGCDLTEAPALLQLARQHCDWL-GVCFHVGSQAMTPFAYVQAIERVRAAIAD 208

Query: 189 FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248
               I+ I +GGG                     + +         E        L    
Sbjct: 209 ASVVIDMIDVGGGFPSVYPGMEPPPLEDYFAIIHKHFEALPIAYNAELWCEPGRALCAEY 268

Query: 249 LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN---------TGPYTAMVCGRSCLA 299
             ++  +      +  +       L                             G +C  
Sbjct: 269 SSLTVRVDKRRGEELYINDGAYGALYDAAHVGWKFPVRALEDDLIKPDMPFAFYGPTCDD 328

Query: 300 GDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348
            D   G F+  + ++ GD I    +  Y    K  FNG       V   +
Sbjct: 329 ADYMEGPFNLPEDIQAGDYIEVGMLGAYGAAMKTGFNGFGNAEQIVVEDE 378


>gi|254293193|ref|YP_003059216.1| Orn/DAP/Arg decarboxylase 2 [Hirschia baltica ATCC 49814]
 gi|254041724|gb|ACT58519.1| Orn/DAP/Arg decarboxylase 2 [Hirschia baltica ATCC 49814]
          Length = 403

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 50/353 (14%), Positives = 111/353 (31%), Gaps = 23/353 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLY 61
           ++P   +  +++                 +L A+K   +    D + +        +SL 
Sbjct: 17  ESPVACVRPERVSTAAAWFQNHFPG---DVLYAVKANPSPWALDAMYEAGMRWFDVASLE 73

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDA---VLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+ L   +F     AY    K                 + +  ++L K  + A    K +
Sbjct: 74  EIELVANRFDDAVLAYMHPIKSRNSIERAYFDYGVRIFVLDCEAELQKILE-ATDFAKDL 132

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFS 176
            L +  +VS         +  F   G+     +++     +  G+ FH   +      + 
Sbjct: 133 TLVVRMAVSNDG-ASMPLSGKFGCFGDDAAHLLQAARSYADELGVSFHVGSQCMDPGAYR 191

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEKYSVQI---- 229
             +  +          ++ + +GGG           +   +   + +  E+  V      
Sbjct: 192 IAMDTVSNTIVQAAVTVDIVDVGGGFPALYPGMQPPELQSYIDVINQVFEEMPVLFNADL 251

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKN----LVIVDSSVEAHVPDYLLYQESATIYPNT 285
           + EPG A+V ++T++   V  + +                      + +     +   + 
Sbjct: 252 WCEPGRALVADSTSIVAKVELVRDGRVYLNDGAYGNLFDAAHCKWPFPMEVHRVSGKTSI 311

Query: 286 GPYTAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                 + G +C + D+  G F     ++ GD I F  +  Y       FNG 
Sbjct: 312 HSKPFTIYGPTCDSIDVLDGVFDLPADIQEGDYIEFGMMGAYGTAMSTRFNGF 364


>gi|254373586|ref|ZP_04989072.1| hypothetical protein FTCG_01683 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151571310|gb|EDN36964.1| hypothetical protein FTCG_01683 [Francisella novicida GA99-3549]
          Length = 416

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 57/385 (14%), Positives = 123/385 (31%), Gaps = 34/385 (8%)

Query: 4   TPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +P ++ID+  LL            +        ++K  +   +     +        S  
Sbjct: 28  SPCFIIDENALLERARLFQQAILNQYQNSIAAYSVKTQSLNTIIQKFCEVGFIPEVVSSD 87

Query: 62  EVMLG--HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           E       +              D  +   L     I  +   ++ +    A+KL+   K
Sbjct: 88  EFEQIQTLQLCDKSIIFNGPYKNDASLIKALQLNAMINCDHFDEILRIAKIAKKLNITAK 147

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGE----KCKDKIESEIKNVNGLMFHNNCENKSFL 173
           IGLR+  + +   +          +             +     + GL  H     +   
Sbjct: 148 IGLRVADNKTPQNWSRFGFALTDQQNNSDIFTTIDKIQQIANIQLAGLHCHIGTNIRDIS 207

Query: 174 ----CFSAMLKNIEKEFGHFITQIEWISLGGGIH-----------FTDKDYPVKDFCQRL 218
                   + +  E     +   +EWI LGGG+                 + ++ +   +
Sbjct: 208 RFTAMAKNIAELAETILTKYKLTLEWIDLGGGLAGISPTLSDKRLQPYNPFDLELYAATI 267

Query: 219 KEFSEKYSVQI------YLEPGEAIVTNTTTLNTT-VLDISENIKNLVIVDSSVEAHVPD 271
               ++Y  +         E G ++V  +  L TT V    +N     ++  +    +P 
Sbjct: 268 IAPLKEYLNKTNNKTKLIFELGRSLVDYSVALLTTIVGTREQNEDFQSLITDAGIHTIPT 327

Query: 272 YLLYQESATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
              Y+           +   ++ G SC+  D   +  F   ++ GD++  + V  YNI+R
Sbjct: 328 ISTYRHPIYHLKTDSYHKKTLLLGPSCMQHDFLHDDIFLPKLEYGDKLLIDGVGAYNISR 387

Query: 331 KNWFNGINMPTIAVKNVDGTIKAIR 355
            N F     P++ + + +   + +R
Sbjct: 388 NNEFI-HLKPSVILIDKNQQYQVLR 411


>gi|302185892|ref|ZP_07262565.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2
           [Pseudomonas syringae pv. syringae 642]
          Length = 371

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 53/356 (14%), Positives = 103/356 (28%), Gaps = 34/356 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVM 64
           +Y +D   +  N              +L A+K      + + L+Q        +SL EV 
Sbjct: 16  FYTVDTHWITRNAQQFSGCFPGT---VLYAMKANPLPQVLEALSQGGINHFDVASLAEVQ 72

Query: 65  LGHEKFGGETHAYNVAYKDCEI---DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
             H              K               + + ++  +L K +D   +    I L 
Sbjct: 73  TVHNTLPNAVQYLMNPVKSRHCLHEAYYRYGVRSFVLDSEEELLKLRDVLPERDSTISLF 132

Query: 122 INPSVSYSKFIL--ADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +  + S S  +            L  +   ++ S      GL FH   +      + A L
Sbjct: 133 VRYAPSESTAVYDLRGKFGASPALATQLVHQVASSTDWSLGLSFHVGSQAIEEGPWLAAL 192

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF------CQRLKEFSEKYSVQIYLEP 233
            + +         +  + +GGG      +            C+ ++       + +  E 
Sbjct: 193 DDADAIVRDTAQHVRHLDIGGGFPGNYLNSMGNTTDLVGRVCEHIQTSPTLKDLNLICEA 252

Query: 234 GEAIVTNTTTLNTTVLDISENIKNL-----------VIVDSSVEAHVPDYLLYQESATIY 282
           G  +V    +L   VL   E+                           D   Y       
Sbjct: 253 GRGLVYGGMSLFARVLSRREHSVFCGAGIFGGLLSAQQWLQFPARVWRDAAPY------- 305

Query: 283 PNTGPYTAMVCGRSCLAGDIFG-EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                 T  + G +C + D     +     ++ GD + F+    Y+++ +  FNG 
Sbjct: 306 TGAAENTFNIFGPTCDSMDRLAFPYTLASDIREGDWLEFQSTGAYSVSLRTPFNGF 361


>gi|157952582|ref|YP_001497474.1| hypothetical protein NY2A_B278R [Paramecium bursaria Chlorella
           virus NY2A]
 gi|155122809|gb|ABT14677.1| hypothetical protein NY2A_B278R [Paramecium bursaria Chlorella
           virus NY2A]
          Length = 372

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 53/350 (15%), Positives = 110/350 (31%), Gaps = 22/350 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+   + + N +D    +     V    A+KC     +  T+         +S YE+  
Sbjct: 19  FYVSSPKIVENLIDQWNILFPR--VTPHYAVKCNNDDVLLKTMCDKNVNFDCASSYEIKK 76

Query: 66  GHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                       +    K  +  I A     D   F++  +L+K  +       K+ LRI
Sbjct: 77  VMRLGVDPSRIIFAHTMKSIEDLIFAKDQGVDIATFDSSFELDKIHE--FHPRCKMILRI 134

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
                 +   L +         E   +  ++    V G+ FH    +++   +   +K  
Sbjct: 135 RCDDPNATVQLGNKFGANEDEVEHLLEYAKNLNIEVVGISFHVGSGSRNPEAYYRAIKAS 194

Query: 183 EKEFG---HFITQIEWISLGGGIH-----FTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
           +  F            + +GGG+H          Y  +     + +F    ++ I  EPG
Sbjct: 195 KDAFDTAISVGHTPYILDIGGGLHADIDEDEISTYMSEYINDAINDFFPDDTITIIAEPG 254

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-------HVPDYLLYQESATIYPNTGP 287
                + ++L T V+             +                 + +    +      
Sbjct: 255 RFFAEHYSSLATQVIGKRVRDGLYEYFFNESTYAGFSNVIFEKSVPIPKLVRHVPDEEEY 314

Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
             +++ G +C   D+  +      + +GD + F+    Y       FNG 
Sbjct: 315 VPSVLYGCTCDGIDVINQNIALPEMNVGDWVVFDSWGAYTNVLVTSFNGF 364


>gi|145640803|ref|ZP_01796385.1| diaminopimelate decarboxylase [Haemophilus influenzae R3021]
 gi|145274317|gb|EDK14181.1| diaminopimelate decarboxylase [Haemophilus influenzae 22.4-21]
          Length = 265

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 67/237 (28%), Gaps = 15/237 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +  G+ + + +   G    S  E
Sbjct: 26  GTPLYVYSRATLERHWHAFDSAFGKHPHLICFAVKSCSNIGVLNIMAKLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +              ++     ++  + A+          +VS+L      A        
Sbjct: 86  LERVLAAGGDASKVVFSGVAKSREEIMRALEVGIRCFNVESVSELKHINQIAGEMGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNCENK 170
           I LR+NP V              ++ G    +  E            + G+  H   +  
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVNEAREVYKLASTLPNIKITGMDCHIGSQLT 205

Query: 171 SFLCFSAMLKN---IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
               F         + ++       ++ + LGGG+  T  D              EK
Sbjct: 206 ELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGLGVTYTDETPPHPSDYANALLEK 262


>gi|83310200|ref|YP_420464.1| diaminopimelate decarboxylase [Magnetospirillum magneticum AMB-1]
 gi|82945041|dbj|BAE49905.1| Diaminopimelate decarboxylase [Magnetospirillum magneticum AMB-1]
          Length = 400

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 50/337 (14%), Positives = 87/337 (25%), Gaps = 21/337 (6%)

Query: 19  DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSLYEVMLGHEKFG-GETHA 76
             A     +   ++L A+KC     +   L     G   ++S+ EV L    F     H 
Sbjct: 46  REAARFVDSFPGQVLYAVKCNPDEAVLRALAAGGIGHFDAASIAEVRLVRRLFPEAGIHF 105

Query: 77  YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADP 136
            +       I           F         K  A+         I            D 
Sbjct: 106 MHPVKARSAIREAYGLHGVRDFVLDGAGELDKIVAETEGASDLRLIVRLGLAKGDARLDL 165

Query: 137 NRPFSRLGEKCKDKIESE-IKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEW 195
           +  F    +     +         GL FH   +      +   L   +        Q++ 
Sbjct: 166 SGKFGASADDAVRLLRRCAAVGRVGLSFHVGSQCCDPSAWERALAQADAVIRAAAIQLDV 225

Query: 196 ISLGGGIHFTDKDYPVKDFCQR-------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248
           + +GGG                       +          ++ EPG A+V    +L   V
Sbjct: 226 LDVGGGFPVAYPGMRPPPLAAFMAAIRRGVARMGLPSGCVLWCEPGRALVAGCQSL---V 282

Query: 249 LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-------YTAMVCGRSCLAGD 301
           + +     +++ ++  V   + D                             G +C + D
Sbjct: 283 VQVQARRGDMLFINDGVYGTLSDAGALAWRYPCRLIKAAGASHETLQAFGFFGPTCDSLD 342

Query: 302 IF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
              G F        GD I    +  Y    +  FNG 
Sbjct: 343 RMPGPFLLPADTAEGDWIEIGQLGAYGACLRTGFNGF 379


>gi|330971195|gb|EGH71261.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2
           [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 371

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 51/356 (14%), Positives = 106/356 (29%), Gaps = 34/356 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVM 64
           +Y +D + +  N              +L A+K      + + L+Q        +SL EV 
Sbjct: 16  FYTVDPRWITQNAQQFSGGFPGT---VLYAMKANPLVHVLEALSQGGINHFDVASLAEVQ 72

Query: 65  LGHEKFGGETHAYNVAYKDCEI---DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
             H              K               + + ++  +L+K +D   +    I + 
Sbjct: 73  TVHNTLPNAVQYLMNPVKSRHCLHEAYYRHGVRSFVLDSEEELSKLRDVLPERDSTISMF 132

Query: 122 INPSVSYSKFIL--ADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +  + S S  +            L  +   ++ +      GL FH   +      + A L
Sbjct: 133 VRYAPSESTAVYDLRGKFGASPALATQLVHQVAASTDWSLGLSFHVGSQAIEDGPWLAAL 192

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF------CQRLKEFSEKYSVQIYLEP 233
            + +         +  + +GGG      +            C+ ++       + +  E 
Sbjct: 193 DDADAIVRDTAQHVRHLDIGGGFPGNYLNSMGNTPDLVGRVCEHIQTSPTLKDLNLICEA 252

Query: 234 GEAIVTNTTTLNTTVLDISENIKNL-----------VIVDSSVEAHVPDYLLYQESATIY 282
           G  +V    +L   VL   E+                           D   Y       
Sbjct: 253 GRGLVYGGMSLFARVLSRREHSVFCGAGIFGGLLSAQQWLQFPARVWRDAAPYS------ 306

Query: 283 PNTGPYTAMVCGRSCLAGDIFG-EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
             +   T  + G +C + D     +     ++ GD + F+    Y+++ +  FNG 
Sbjct: 307 -GSAETTFNIFGPTCDSMDRLAFPYTLASDIREGDWLEFQSTGAYSVSLRTPFNGF 361


>gi|312377940|gb|EFR24646.1| hypothetical protein AND_10628 [Anopheles darlingi]
          Length = 397

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 50/360 (13%), Positives = 104/360 (28%), Gaps = 29/360 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  L+D  +++ N       +   G+    A        +   + +   G + +S  E+ 
Sbjct: 28  PINLLDLDRIVQNYQRWTEQQHGTGLLPYYAPSVNNHPTVLALMARLGVGFSCASEEEMC 87

Query: 65  LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                        +    K  E    A   +   ++ ++ ++++K           + +R
Sbjct: 88  TALSLGVPPGRIRFVHPVKTVESILFAKQHHIKRLVVDSETEIDKVYRHYPDGQLLLRIR 147

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           ++      K+           L     + I+     V     + +               
Sbjct: 148 LSR---EQKYGCCPRGDAPGILAHAKANGIQVAGLYVAIPAPNQHQVEALQRGLEQAKAV 204

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            E+     +T I  +++ G      +  P       +       ++   +E     V + 
Sbjct: 205 YEQACALGLTDIRELAIAGA-----ETIPSSALASAIANLELPATISCVIETERQFVESA 259

Query: 242 TTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAM--------- 291
            TL T+V         +   V   +   + D           P T   T           
Sbjct: 260 VTLVTSVQSKRIVRDPDQPEVIREIMYFINDGRYGSFEWWTTPVTKEPTVYRTNGARQPL 319

Query: 292 --------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343
                   V G +C + D+  E      + IGD + F DV  Y     + FNG  +P + 
Sbjct: 320 PAQVWPSSVWGPTCDSADVVFEKVNLPELDIGDFLVFADVGAYGGTLASQFNGCPLPRMI 379


>gi|291449262|ref|ZP_06588652.1| decarboxylase [Streptomyces roseosporus NRRL 15998]
 gi|291352209|gb|EFE79113.1| decarboxylase [Streptomyces roseosporus NRRL 15998]
          Length = 464

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 57/369 (15%), Positives = 105/369 (28%), Gaps = 34/369 (9%)

Query: 9   IDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67
           ID + +  ++           GV    A K  +   +   L     G   +S  E+ L  
Sbjct: 54  IDTEGVRASVGALHDAFAATPGVLHTFAAKACSLIPVLRLLAGCGMGCEVASPGELRLAL 113

Query: 68  E-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI-GLRINP 124
           E  F        + A    EI   L+    +  +++++L +           + GLRINP
Sbjct: 114 EAGFPASRIVLDSPAKTREEIRLALALGVAVNADSLAELRRIDALRNPSTTSVLGLRINP 173

Query: 125 SVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFHNNCENKSFLCFS 176
            V              S+ G   +D        +   E   +  L  H   +       +
Sbjct: 174 QVGGGSIGPMSTATDTSKFGVALRDPGAREAIVEAFRERPWLTRLHAHVGSQGCPLELIA 233

Query: 177 AMLKNIEKEFGHFI-----TQIEWISLGGGIHFTDKDY-------PVKDFCQRLKEFSEK 224
           A +    +            QI  + +GGG+     D                       
Sbjct: 234 AGVARTYELAEEINGTLGVRQITSLDIGGGLPVNFADETVRPTYADYVAALTAAAPGLFS 293

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENI------KNLVIVDSSVEAHVPDYL---LY 275
               +  E G +++     +   V    +         +     ++    +PD     + 
Sbjct: 294 GHYALVTEFGRSLLAKNGFIGARVEYTKDAGGRRIALTHAGAQTATRTVLMPDAWPLRIG 353

Query: 276 QESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                  P  GP  A  + G  C AGD+         +   D +   D   Y  +    +
Sbjct: 354 AFGPDGVPKGGPVLAQDIAGPCCFAGDVVAYGRELPELAEDDVVVLYDTGAYYFSTPWAY 413

Query: 335 NGINMPTIA 343
           N +  P + 
Sbjct: 414 NSLPRPAVY 422


>gi|239992274|ref|ZP_04712938.1| putative decarboxylase [Streptomyces roseosporus NRRL 11379]
          Length = 454

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 57/369 (15%), Positives = 105/369 (28%), Gaps = 34/369 (9%)

Query: 9   IDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67
           ID + +  ++           GV    A K  +   +   L     G   +S  E+ L  
Sbjct: 44  IDTEGVRASVGALHDAFAATPGVLHTFAAKACSLIPVLRLLAGCGMGCEVASPGELRLAL 103

Query: 68  E-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI-GLRINP 124
           E  F        + A    EI   L+    +  +++++L +           + GLRINP
Sbjct: 104 EAGFPASRIVLDSPAKTREEIRLALALGVAVNADSLAELRRIDALRNPSTTSVLGLRINP 163

Query: 125 SVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFHNNCENKSFLCFS 176
            V              S+ G   +D        +   E   +  L  H   +       +
Sbjct: 164 QVGGGSIGPMSTATDTSKFGVALRDPGAREAIVEAFRERPWLTRLHAHVGSQGCPLELIA 223

Query: 177 AMLKNIEKEFGHFI-----TQIEWISLGGGIHFTDKDY-------PVKDFCQRLKEFSEK 224
           A +    +            QI  + +GGG+     D                       
Sbjct: 224 AGVARTYELAEEINGTLGVRQITSLDIGGGLPVNFADETVRPTYADYVAALTAAAPGLFS 283

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENI------KNLVIVDSSVEAHVPDYL---LY 275
               +  E G +++     +   V    +         +     ++    +PD     + 
Sbjct: 284 GHYALVTEFGRSLLAKNGFIGARVEYTKDAGGRRIALTHAGAQTATRTVLMPDAWPLRIG 343

Query: 276 QESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                  P  GP  A  + G  C AGD+         +   D +   D   Y  +    +
Sbjct: 344 AFGPDGVPKGGPVLAQDIAGPCCFAGDVVAYGRELPELAEDDVVVLYDTGAYYFSTPWAY 403

Query: 335 NGINMPTIA 343
           N +  P + 
Sbjct: 404 NSLPRPAVY 412


>gi|239945803|ref|ZP_04697740.1| putative decarboxylase [Streptomyces roseosporus NRRL 15998]
          Length = 434

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 57/369 (15%), Positives = 105/369 (28%), Gaps = 34/369 (9%)

Query: 9   IDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67
           ID + +  ++           GV    A K  +   +   L     G   +S  E+ L  
Sbjct: 24  IDTEGVRASVGALHDAFAATPGVLHTFAAKACSLIPVLRLLAGCGMGCEVASPGELRLAL 83

Query: 68  E-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI-GLRINP 124
           E  F        + A    EI   L+    +  +++++L +           + GLRINP
Sbjct: 84  EAGFPASRIVLDSPAKTREEIRLALALGVAVNADSLAELRRIDALRNPSTTSVLGLRINP 143

Query: 125 SVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFHNNCENKSFLCFS 176
            V              S+ G   +D        +   E   +  L  H   +       +
Sbjct: 144 QVGGGSIGPMSTATDTSKFGVALRDPGAREAIVEAFRERPWLTRLHAHVGSQGCPLELIA 203

Query: 177 AMLKNIEKEFGHFI-----TQIEWISLGGGIHFTDKDY-------PVKDFCQRLKEFSEK 224
           A +    +            QI  + +GGG+     D                       
Sbjct: 204 AGVARTYELAEEINGTLGVRQITSLDIGGGLPVNFADETVRPTYADYVAALTAAAPGLFS 263

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENI------KNLVIVDSSVEAHVPDYL---LY 275
               +  E G +++     +   V    +         +     ++    +PD     + 
Sbjct: 264 GHYALVTEFGRSLLAKNGFIGARVEYTKDAGGRRIALTHAGAQTATRTVLMPDAWPLRIG 323

Query: 276 QESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                  P  GP  A  + G  C AGD+         +   D +   D   Y  +    +
Sbjct: 324 AFGPDGVPKGGPVLAQDIAGPCCFAGDVVAYGRELPELAEDDVVVLYDTGAYYFSTPWAY 383

Query: 335 NGINMPTIA 343
           N +  P + 
Sbjct: 384 NSLPRPAVY 392


>gi|225719632|gb|ACO15662.1| Diaminopimelate decarboxylase [Caligus clemensi]
          Length = 445

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 58/397 (14%), Positives = 121/397 (30%), Gaps = 50/397 (12%)

Query: 8   LIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           + D     + + + L    + G  ++   A+K     G+         G   +S+ EV+L
Sbjct: 24  IFDLDYFNSRITSLLKAFPSDGQNLQHTFAVKANPLRGVLLAAKARGLGAECASISEVLL 83

Query: 66  GHE-KFGG-ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK----LHKKIG 119
                F   +    +      +I   L++   +  +   ++    +  Q+        +G
Sbjct: 84  SLSLGFEPCKVIFDSPCKTREDIRIALNSGVVMNLDNEREMGLVHEILQEGNVKDRPLVG 143

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCENKSF 172
           LRINP V    F +       S+ G    +        +  E   +NG+  H   +    
Sbjct: 144 LRINPVVGGGDFDILSTATKASKFGLPLCENTKERILSLFEECGWLNGVHIHVGSQGVPL 203

Query: 173 LCFSAMLKNIEKEFGHF-----ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
             F    K + +             +E + +GGG+  +     V+        + E+   
Sbjct: 204 KKFVDGAKKLMEFVHKIESCRGGRLLETVDIGGGLSTSYILEDVEPKEFTFALYKEELSK 263

Query: 226 --------SVQIYLEPGEAIVTNTTTLNTTVLDIS---ENIKNLVIVDSSVEAHVPDYLL 274
                     ++  E G ++        T V  I      I+ ++     V   + +  L
Sbjct: 264 AVPELFDGRRRVITEFGRSLALKAGKTLTRVEHIKEWIPEIRPIIQTHVGVNQFIRETYL 323

Query: 275 YQESATIYP------------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFED 322
               +                        + G  C  GD             GD ++  D
Sbjct: 324 PDTWSHRISLLNPLGNTKTCAPENKVLYDIAGPLCFQGDYLQSSVSLPSATPGDVLAIHD 383

Query: 323 VAGYNINRKNWFNGINMPTIAV----KNVDGTIKAIR 355
              Y ++  + +N I  P++       N +   + +R
Sbjct: 384 TGAYTMSMYSRYNSI-RPSVVYGYERINEEEKDQCLR 419


>gi|295110384|emb|CBL24337.1| Diaminopimelate decarboxylase [Ruminococcus obeum A2-162]
          Length = 399

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 52/381 (13%), Positives = 117/381 (30%), Gaps = 36/381 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y+ D  ++    +           ++  A+K      +   + + +      S  
Sbjct: 16  IPTPAYVFDLDEMKEFAEKVKRCLTG-KAEICYAMKANPF--LIKPMLEIVSSLEVCSPG 72

Query: 62  EVMLG-HEKFGGETHAYNVAYKDCEIDAVL----SNCDTIIFNTVSQLNKFKDKAQKLHK 116
           E  +             +  YK+ +  A +     N  T    ++  L    D A +   
Sbjct: 73  EFRICERAGIPMGKIVLSGVYKNPDDIAYMLDRYGNSGTYTVESLQHLKVLNDTAVRHGI 132

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
            + + I                  + + +   ++ +     + G+ F++  + ++     
Sbjct: 133 ILSVLIRV------TSGNQFGIDEAEIRKIISEREKYAGIEIEGIQFYSGTQKRNLSQMQ 186

Query: 177 AMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK------YS 226
             L++++            +I  +  G G           +  + L E  +K      + 
Sbjct: 187 EELEHLDAFIRDLEDINGMEIRTLEYGPGFFVPYFVKDKSERTEDLLEEFKKILEALQFH 246

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV----------PDYLLYQ 276
            +I LE G  +  +     T+++D+  N +    +      H+            Y    
Sbjct: 247 GKIVLEMGRFLAASCGYYITSIVDMKVNKEQPYAILDGGINHLNYYGQAMAMKRPYCSQL 306

Query: 277 ESATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWF 334
            S       G      +CG  C   D+  +    +  +I D + FE V  Y++      F
Sbjct: 307 NSKGSEKTEGKEENWNLCGALCTVSDVIVKQFPLRNPEICDILVFERVGAYSVTEGIYLF 366

Query: 335 NGINMPTIAVKNVDGTIKAIR 355
               +P I        +  +R
Sbjct: 367 LSRPLPKIYFWTQADGLCLVR 387


>gi|34147969|gb|AAQ62560.1| arginine decarboxylase [Homo sapiens]
          Length = 460

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 50/362 (13%), Positives = 117/362 (32%), Gaps = 37/362 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++       +++    V+   A+KC ++ G+   L Q   G + ++  E+ L
Sbjct: 41  FFVADLGAIVR--KHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 98

Query: 66  G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             H              K        +     + +  +++   K        K+ L I  
Sbjct: 99  VQHIGIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKMVLCIAT 158

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S+S   L+       +      +  +     V G+ FH          ++  + +   
Sbjct: 159 DDSHSLSCLSLKFGVSLKSCRHLLENAKKHHVEVVGVSFHIGSGCPDPQAYAQSIADARL 218

Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPGE 235
            F        ++  + LGG    T+      +    +        F E   V I+ E G 
Sbjct: 219 VFEMGTELGHKMHVLDLGGXFPGTEGAKVRFEEIASVINSALDLYFPEGCGVDIFAELGR 278

Query: 236 AIVTNTTTLNTTVLDI-----------------------SENIKNLVIVDSSVEAHVPDY 272
             VT+  T+  +++                           +     I +S +  ++   
Sbjct: 279 YYVTSAFTVAVSIIAKKEVLLDQPGREEENGSTSKTIVYHLDEGVYGIFNSVLFDNICPT 338

Query: 273 LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
            + Q+  +       Y++ + G +    D   E  +   + +GD + F+++  Y +   +
Sbjct: 339 PILQKKPSTEQP--LYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNMGAYTVGMGS 396

Query: 333 WF 334
            F
Sbjct: 397 PF 398


>gi|290983144|ref|XP_002674289.1| ornithine decarboxylase [Naegleria gruberi]
 gi|284087878|gb|EFC41545.1| ornithine decarboxylase [Naegleria gruberi]
          Length = 536

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 57/404 (14%), Positives = 114/404 (28%), Gaps = 76/404 (18%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           ++++D   ++  ++               A+KC     +   +     G   +SL E+ L
Sbjct: 126 FHIVDLSHVIRQVERWRLCFPRIN--PYYAVKCNPNESIIKVMYMMGCGFDCASLNEIKL 183

Query: 66  -------GHEKFGGETHAY-------NVAYKDCEIDAVLSNCDTI--------------- 96
                    E F    H Y       NV  +        +  D I               
Sbjct: 184 VTQLCNEVDEWFAKHPHFYEVLAFVNNVTVEQVMSKKFCTTTDIIFANPCKQLSHVRYAR 243

Query: 97  -------IFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD 149
                    ++  ++ K   + + +   I ++ + S S   F         +  G     
Sbjct: 244 DNGLQWTTIDSPQEVEKLARQWKDVKGVIRIKTDDSNSACAFSSKFGVSIENARGIF--Q 301

Query: 150 KIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTD 206
             +     + G+ FH     +    +   +K+    F     +      + +GGG     
Sbjct: 302 SAKDNNVELCGVSFHVGSGCQDVNAYVKAVKDARIIFDMAEEYGYSFNLLDIGGGFLGNI 361

Query: 207 KD----YPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD 262
           K+      V    + L +      V++  EPG  I    + L   +    +  +   +  
Sbjct: 362 KETPTVEDVASNVRDLIDDLFPSHVKVISEPGRFIAQAVSVLVVNIFSKKDLREENKLYY 421

Query: 263 SSVEA-------HVPDYLLY----------------QESATIYPNT------GPYTAMVC 293
             +E        H  D  +Y                    T             Y +   
Sbjct: 422 KQLEESGASDIVHDRDDFIYYLNDGIYGSFNNIYFDHAEPTFKTIKTAEEKGAKYKSTCF 481

Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
           G +C + DI  + +    +  GD + F +   Y     + FNG 
Sbjct: 482 GPTCDSIDITCKGYLLPELNEGDFLYFTNFGAYTTASSSQFNGF 525


>gi|238879425|gb|EEQ43063.1| ornithine decarboxylase [Candida albicans WO-1]
          Length = 473

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 59/385 (15%), Positives = 119/385 (30%), Gaps = 56/385 (14%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  +++N+++          V+   A+KC +   +  TL++       +S  E+ L
Sbjct: 77  FFVCDLGEIINSVNQWQQSL--PMVQPYYAVKCNSNPQILTTLSELGVNFDCASKNEIDL 134

Query: 66  GHEKF---GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                     E   Y    K        +N +  +    +    +K      H KI +R+
Sbjct: 135 VLSLGIHQAHERIIYANPCKTNSFIRHAANENVNLTTVDNVHELYKLAKFHPHCKILIRL 194

Query: 123 NPSVSYSKFILADPNRPF--SRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
               S ++  L+        + +GE      +     V+G+ FH     K F      +K
Sbjct: 195 ITDDSTAQCQLSTKFGCDLNTAIGEILPKA-KELGLQVHGVAFHVGSGAKDFSSIYQAIK 253

Query: 181 NIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS-----EKYSVQIYLE 232
           +    F          + + +GGG          +     L++F      +   ++   E
Sbjct: 254 DSRILFDEMLSMGFTPKLLDIGGGFERETFPQSSQMVKFALEKFFPIEFSQSNEIKFIAE 313

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------------------AHVPDY 272
           PG  +V N  TL T ++   +        ++ +                      H    
Sbjct: 314 PGRFMVANAFTLITHIIARRDLPTGGNNHNNDMTPSAMLYINDGVYGNLNCILFDHQTPK 373

Query: 273 LLYQESATIYPNTGP-------------------YTAMVCGRSCLAGDIFGEFHFEKP-V 312
           +    +                            +   + G +C   D           V
Sbjct: 374 VYVLTNENQLFYKQEMMRSLSVNNNNNNNNKTDGFKFSIWGPTCDGLDCVSSLAKLSKNV 433

Query: 313 KIGDRISFEDVAGYNINRKNWFNGI 337
           ++GD + FE+V  Y       FNG+
Sbjct: 434 QVGDWLFFENVGAYTSCASTKFNGL 458


>gi|145628394|ref|ZP_01784195.1| diaminopimelate decarboxylase [Haemophilus influenzae 22.1-21]
 gi|144980169|gb|EDJ89828.1| diaminopimelate decarboxylase [Haemophilus influenzae 22.1-21]
          Length = 220

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 67/214 (31%), Gaps = 13/214 (6%)

Query: 161 LMFHNNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTD----KDYPVKD 213
           +  H   +      F      +    ++       ++ + LGGG+  T       +P   
Sbjct: 1   MDCHIGSQLTELQPFLDAADRLIVLMEQLKEDGITLKHLDLGGGLGVTYTDETPPHPSDY 60

Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDY 272
               L++      ++I LEPG AI  N   L   V  +     +N  I D+ +   +   
Sbjct: 61  ANALLEKLKNYPELEIILEPGRAISANAGILVAKVQYLKSNESRNFAITDTGMNDMIRPA 120

Query: 273 LLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
           L       I  +           V G  C   D  G+      +  GD I+      Y  
Sbjct: 121 LYEAYMNIIEIDRTLAREKAIYDVVGPVCETSDFLGKQRELS-IAEGDYIAQCSAGAYGA 179

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
           +  + +N        + + D +    R  +  + 
Sbjct: 180 SMSSNYNSRPRTAEVLVDGDQSYLIRRRETLQEL 213


>gi|145593239|ref|YP_001157536.1| Orn/DAP/Arg decarboxylase 2 [Salinispora tropica CNB-440]
 gi|145302576|gb|ABP53158.1| diaminopimelate decarboxylase [Salinispora tropica CNB-440]
          Length = 416

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 56/390 (14%), Positives = 104/390 (26%), Gaps = 39/390 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP Y  D  +L  +             +L  +LK      +   L          S  E
Sbjct: 15  QTPAYFYDLDELTRSNAALRAALPRP-TELFYSLKANPHPTVVAELTAAGCRAEVCSPGE 73

Query: 63  VMLGHEKF--GGETHAYNVAYKDCE-IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + +         +        +D +  +AV +  +    ++   L++    A++   ++ 
Sbjct: 74  LRVALAAGCDPAQVLYTGPGKRDIDLAEAVRAGVELFSVDSPYGLDQLDRMAREHDVEVR 133

Query: 120 LRINPSVSYS-------KFILADPNRPFSRLGEKCKDKI-ESEIKNVNGLMFHNNCENKS 171
             +  +              +A       R      D           G   +       
Sbjct: 134 ALVRINDDTPAPGQGLTMTGVASQFGADVRWVLDQPDLFGPRRNVCPVGFHLYMGSNVDG 193

Query: 172 ----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD-----------YPVKDFCQ 216
                  F+  +  I +       Q E I LGGG                    +     
Sbjct: 194 EDALIAQFTQSVDTIRRLVAATGRQPELIDLGGGFGAPFARAGARPDLPKLADRLAALLA 253

Query: 217 RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ 276
                  +    +  E G  +V    TL T VL++  +    V+V  S   H+      +
Sbjct: 254 DAFPGWPEQGPAVAFESGRYLVGTCGTLVTRVLEVKRSQGIPVVVLESGIHHLGGMSGLR 313

Query: 277 ESATIYPNTGPYTA---------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
               I P+     A         +V G  C   D +       P+  G  ++  +V  Y 
Sbjct: 314 RLPPIVPDLLTVDAAAGPPIPGTIVTGPLCTPLDTWARATALPPLVPGQLVAVPNVGAYG 373

Query: 328 INRKNW--FNGINMPTIAVKNVDGTIKAIR 355
           +   +   F    MP              R
Sbjct: 374 L-YASLVAFLAHPMPIEVTIAGGQVTSVTR 402


>gi|260437083|ref|ZP_05790899.1| putative pyridoxal-dependent decarboxylase, C- sheet domain protein
           [Butyrivibrio crossotus DSM 2876]
 gi|292810392|gb|EFF69597.1| putative pyridoxal-dependent decarboxylase, C- sheet domain protein
           [Butyrivibrio crossotus DSM 2876]
          Length = 391

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 47/376 (12%), Positives = 108/376 (28%), Gaps = 33/376 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+ D   L   +     I     + +  A+K      + + +  Y+D     S  E
Sbjct: 14  GSPSYIFDLDALKERVLNIKKILGK-DINICYAMKANPF--IIEEMKDYIDRYEVCSPGE 70

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAV----LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             +        +    +   K  E         +        +    +      ++ +  
Sbjct: 71  YEICQRHSVKKDVIIVSGVNKTYESMERIMSLCNGDGIFTIESAEHYDILSKVCKEKNIH 130

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK---SFLC 174
           I + I                             ++E  +  G+ +++  + K       
Sbjct: 131 IRVVIRL------TSGNQFGIDKDMFKNILLQLKDNEYLDFAGIHYYSGTQKKLKKVIKE 184

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSVQIY 230
            + + +  ++    +    + +  G G+ F      +     +    LK+  +      +
Sbjct: 185 VAMLEEFAKELQDEYGVATDILEYGPGLLFNYFEGEETPSFGEQLSELKDILKNIKSFKH 244

Query: 231 L--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY--LLYQESATIYPNTG 286
           +  E G  I +      T V+D   N  +   +       +  Y   L  +   +   T 
Sbjct: 245 ITLEMGRFIASECGYYCTEVVDRKCNNGSEYAIVDGGIHQINYYGQTLGMKKPFMDVITC 304

Query: 287 PYTA-----MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN--RKNWFNGINM 339
             +       +CG  C   D+         +  GD + F++   Y+I       F    +
Sbjct: 305 NNSYELQKINICGSLCTVNDVILRDVSLPQLDKGDILIFKNCGAYSITEGMA-LFLSREL 363

Query: 340 PTIAVKNVDGTIKAIR 355
           P +   N D     +R
Sbjct: 364 PAVIFYNKDTGFVRVR 379


>gi|156371417|ref|XP_001628760.1| predicted protein [Nematostella vectensis]
 gi|156215745|gb|EDO36697.1| predicted protein [Nematostella vectensis]
          Length = 446

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 57/400 (14%), Positives = 128/400 (32%), Gaps = 46/400 (11%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE 68
            D  +   N+D         G    +A+K      + D +N+   G   +S+ EV+   +
Sbjct: 39  YDLDEFEANVDRVTEAFGQ-GCLHAIAVKANPVPALLDLVNKKGQGAECASIGEVLNALK 97

Query: 69  -KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK---KIGLRIN 123
             F  E   Y +      E+  ++     +  +   +L    +  ++L      IGLRIN
Sbjct: 98  VGFPAERIVYDSPVKTRPELKFLMEQGVHLNVDNFQELQVITELMKELKNVKSTIGLRIN 157

Query: 124 PSVSYSKFILADPNRPFSRLGEKC-----KDKIES--EIKNVNGLMFHNNCENKSFLC-- 174
           P +          +   S+           + I    +   +N +  H   ++       
Sbjct: 158 PVMDAGDIKALSVSCTDSKFAVALTESTRDEIIGWFVDRPWMNCVHVHVGSQSYGVEGLS 217

Query: 175 --FSAMLKNIEKEFGHFIT-QIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYL 231
                 +             Q+E I +GGG+    +D  +    Q      +K   Q++ 
Sbjct: 218 EGARRAVDLALAVNKKVGRNQVEIIDIGGGMGVNREDDSISPTYQDYVNALKKAVPQLFP 277

Query: 232 ----------EPGEAIVTNTTTLNTTVLDISENIKNLVI--------VDSSVEAHVPDYL 273
                     E G+++   T  + + V    +  ++                  + P   
Sbjct: 278 DQGVFKQLVTEFGQSLNAKTGFIVSRVEYTKKVPESDHTIALIHAGADMCLRSCYCPQVA 337

Query: 274 LYQESATIYPNTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
            Y+    ++ + G           + G  C AGD+  +      ++ GD +   D    +
Sbjct: 338 KYKRRVQVFDSNGKPKTGQEKLHNIAGPLCFAGDVVRKEVMLPQIERGDYVILHDCGANS 397

Query: 328 INRKNWFNGINMPTI--AVKNVDG-TIKAIRE-FSYNDYY 363
           +   +       P++       D    + ++E  ++++ +
Sbjct: 398 LATFSRHCSRFAPSVFGYRVKDDQVEFQVLKEAETFDELF 437


>gi|321254369|ref|XP_003193051.1| ornithine decarboxylase [Cryptococcus gattii WM276]
 gi|317459520|gb|ADV21264.1| ornithine decarboxylase, putative [Cryptococcus gattii WM276]
          Length = 527

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 59/413 (14%), Positives = 115/413 (27%), Gaps = 66/413 (15%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           ++  D   +   +         + V++  A+KC  +  +   L+        +S  E+  
Sbjct: 106 FFAADLSAVYQAVQMWRASPIGSRVEIFYAVKCNPSPAVLHLLSLMGTSFDCASSSEINQ 165

Query: 66  GH---EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
                    G+   +    K       A       + F+ V +L K K         + +
Sbjct: 166 VLSLPSAPSGDRIIFANPCKPASFIRTAAQRGVSMMTFDNVDELYKVKRICPNAKLVLRM 225

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
             + S S  +  L       S  G            NV G+ FH     K  + F+  + 
Sbjct: 226 LTDDSKSLCRLGLKFGAPVDSCPG--LLKVARQLGLNVVGVSFHVGSGCKDPMQFADAVW 283

Query: 181 NIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS-EKYSVQIYLEPGEA 236
              K F          + + +GGG          +        +  E   V+I  EPG  
Sbjct: 284 RARKVFDMGKEAGYDFDLLDIGGGFERETFAEMTQVLKDSFDLYFPEDSGVRIIAEPGRF 343

Query: 237 IVTNTTTLNTTVLDISE-----------------------NIKNLVIVDSSVEAHVPDYL 273
           +V++  TL T+++                                  V  S    + D+ 
Sbjct: 344 LVSSAFTLATSIIASRRAPKAEASQQAQAATQEDTKSADVMYYINDGVYGSFNCIMFDHQ 403

Query: 274 LYQESATIYPNTGP---------------------------YTAMVCGRSCLAGDIFGEF 306
           +         +                                  V G +C + D   + 
Sbjct: 404 IVHPHPLTIGHKLATAAPPFPPPPNVQLEVDLPVQMGYKDVEKVSVWGPTCDSIDCVRQL 463

Query: 307 HFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK---AIR 355
                 + +GD I + ++  Y +   + FNG +     +    G  +    +R
Sbjct: 464 VDLPKGMDVGDWIGWGEMGAYTLCAASTFNGFDRSP-VLWTTGGDTEDARVVR 515


>gi|302551918|ref|ZP_07304260.1| diaminopimelate decarboxylase [Streptomyces viridochromogenes DSM
           40736]
 gi|302469536|gb|EFL32629.1| diaminopimelate decarboxylase [Streptomyces viridochromogenes DSM
           40736]
          Length = 475

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 56/388 (14%), Positives = 106/388 (27%), Gaps = 39/388 (10%)

Query: 8   LIDKQKLLNNLDTALYIRK-----NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           L+D   +  +                 V    A+K      +   L +   G   +S  E
Sbjct: 65  LLDVTGIRESAAELRAAFDAVVAPGTPVLHAFAVKATPLVPVLRLLREEGVGAEVASPGE 124

Query: 63  VMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKI 118
           + L          T   + A    E+   L+    +  +   +L +             +
Sbjct: 125 LALARAAGVEPAMTVLDSPAKTPAELREALALGIAVNADNPQELERIDGLMSSAASRSPL 184

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCE-- 168
           G+R+NP V              S+ G   +D+   E           +  L  H   +  
Sbjct: 185 GIRVNPQVGGGSIEATSTATATSKFGVALRDEGAREWVVQACLDRPWLTRLHAHTGSQGI 244

Query: 169 --NKSFLCFSAMLKNIEKEFGHFIT-QIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
             +      +      E+        QI+ + +GGG+              +      + 
Sbjct: 245 PLSLMARGVAETYALAEEINRRAGRRQIDTLDIGGGLPVNFASDATTPTYAQYARVLAEE 304

Query: 226 -------SVQIYLEPGEAIVTNTTTLNTTVLDIS---------ENIKNLVIVDSSVEAHV 269
                     +  E G +++    T+   V              +    V   +      
Sbjct: 305 VPGLFDGRYGLVTEFGRSLLAKHGTVVARVEYAKSSGGRAVAVTHAGVQVAARTVYAPGS 364

Query: 270 PDYLLYQESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
               +    A      GP     V G +C +GD+  E      ++ GD  +  D   Y  
Sbjct: 365 WPLRIAAYDAKGRVKDGPVVVQDVAGPACFSGDLLAEGRSMPELEQGDYAAALDTGAYYF 424

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIRE 356
                +N +  P +     DG    +RE
Sbjct: 425 AHHYAYNSLARPGVYGFWPDGRFAVVRE 452


>gi|18916739|dbj|BAB85531.1| KIAA1945 protein [Homo sapiens]
          Length = 420

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 51/362 (14%), Positives = 118/362 (32%), Gaps = 37/362 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++       +++    V+   A+KC ++ G+   L Q   G + ++  E+ L
Sbjct: 46  FFVADLGAIVR--KHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 103

Query: 66  G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             H              K        +     + +  +++   K        K+ L I  
Sbjct: 104 VQHIGIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKMVLCIAT 163

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S+S   L+       +      +  +     V G+ FH          ++  + +   
Sbjct: 164 DDSHSLSCLSLKFGVSLKSCRHLLENAKKHHVEVVGVSFHIGSGCPDPQAYAQSIADARL 223

Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPGE 235
            F        ++  + LGGG   T+      +    +        F E   V I+ E G 
Sbjct: 224 VFEMGTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEGCGVDIFAELGR 283

Query: 236 AIVTNTTTLNTTVLDI-----------------------SENIKNLVIVDSSVEAHVPDY 272
             VT+  T+  +++                           +     I +S +  ++   
Sbjct: 284 YYVTSAFTVAVSIIAKKEVLLDQPGREEENGSTSKTIVYHLDEGVYGIFNSVLFDNICPT 343

Query: 273 LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
            + Q+  +       Y++ + G +    D   E  +   + +GD + F+++  Y +   +
Sbjct: 344 PILQKKPSTEQP--LYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNMGAYTVGMGS 401

Query: 333 WF 334
            F
Sbjct: 402 PF 403


>gi|158254464|dbj|BAF83205.1| unnamed protein product [Homo sapiens]
          Length = 448

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 57/371 (15%), Positives = 108/371 (29%), Gaps = 31/371 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  K++        +     +K    +KC +A  + + L     G   SS  E+ L
Sbjct: 40  FFVGDLGKIVKKHSQWQNVVAQ--IKPFYTVKCNSAPAVLEILAALGTGFACSSKNEMAL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             E     E   Y    K        +     I    +++   K      + K+ L I  
Sbjct: 98  VQELGVPPENIIYISPCKQVSQIKYAAKVGVNILTCDNEIELKKIARNHPNAKVLLHIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             +              +      +  +     + G+ FH +   K    +   L +   
Sbjct: 158 EDNIGGEEGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARC 217

Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238
            F   G     +  + +GGG      +   V      L    F E   V+I  EPG   V
Sbjct: 218 VFDMAGEIGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLGIYFPEGSGVKIISEPGSYYV 277

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE--------------------- 277
           ++  TL   ++       +                +Y                       
Sbjct: 278 SSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVYGSFASKLSEDLNTIPE 337

Query: 278 -SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                  +   +T+ + G SC   D   E      + +GD + F+++   + +  + FN 
Sbjct: 338 VHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSFHEPSAFND 397

Query: 337 INMPTIAVKNV 347
              P I     
Sbjct: 398 FQRPAIYYMMS 408


>gi|30583931|gb|AAP36214.1| Homo sapiens ornithine decarboxylase antizyme inhibitor [synthetic
           construct]
 gi|60653891|gb|AAX29638.1| ornithine decarboxylase antizyme inhibitor [synthetic construct]
          Length = 449

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 57/371 (15%), Positives = 108/371 (29%), Gaps = 31/371 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  K++        +     +K    +KC +A  + + L     G   SS  E+ L
Sbjct: 40  FFVGDLGKIVKKHSQWQNVVAQ--IKPFYTVKCNSAPAVLEILAALGTGFACSSKNEMAL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             E     E   Y    K        +     I    +++   K      + K+ L I  
Sbjct: 98  VQELGVPPENIIYISPCKQVSQIKYAAKVGVNILTCDNEIELKKIARNHPNAKVLLHIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             +              +      +  +     + G+ FH +   K    +   L +   
Sbjct: 158 EDNIGGEEGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARC 217

Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238
            F   G     +  + +GGG      +   V      L    F E   V+I  EPG   V
Sbjct: 218 VFDMAGEIGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDIYFPEGSGVKIISEPGSYYV 277

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE--------------------- 277
           ++  TL   ++       +                +Y                       
Sbjct: 278 SSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVYGSFASKLSEDLNTIPE 337

Query: 278 -SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                  +   +T+ + G SC   D   E      + +GD + F+++   + +  + FN 
Sbjct: 338 VHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSFHEPSAFND 397

Query: 337 INMPTIAVKNV 347
              P I     
Sbjct: 398 FQRPAIYYMMS 408


>gi|221124530|ref|XP_002167271.1| PREDICTED: similar to Ornithine decarboxylase, partial [Hydra
           magnipapillata]
          Length = 296

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 46/319 (14%), Positives = 93/319 (29%), Gaps = 33/319 (10%)

Query: 36  LKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSN 92
           +K      +   L +       +S  E+    +     +   +      +     A   N
Sbjct: 1   VKSNPNPVVIALLARLGVNFDCASKCEIETVLDLGVNPDRIIFANPCKQESHVKYANTKN 60

Query: 93  CDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152
              + F++  +   +K K      ++ LRI    S S F L           +K     +
Sbjct: 61  VRKMTFDS--EGELYKVKENFPGAELVLRIKVDDSKSTFKLGRKFGASLETTQKLLQLAK 118

Query: 153 SEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDY 209
               NV G+ FH          F   +K+    F            + +GGG        
Sbjct: 119 DLDLNVIGVSFHVGTGCYDAALFYNAVKSAADVFQQGDNIGFTFTLLDIGGGFPGF---- 174

Query: 210 PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV 269
                                +      +         V +  +N + +  ++  V    
Sbjct: 175 -----------------KDETISMENFTLCCNVISVKEVSNNDKNEQFMYYLNDGVYTSF 217

Query: 270 PDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
            D L  ++              + + + G +C + D   E  +   + + D + F+++  
Sbjct: 218 KDVLFGKKFIPFLLQESSTSLLFKSSLWGPTCDSTDCISEEIYLPKLSVQDLLYFKNMGA 277

Query: 326 YNINRKNWFNGINMPTIAV 344
           Y+    + FNG N P I  
Sbjct: 278 YSTCFASKFNGFNPPVIYY 296


>gi|114568928|ref|YP_755608.1| ornithine decarboxylase [Maricaulis maris MCS10]
 gi|114339390|gb|ABI64670.1| Ornithine decarboxylase [Maricaulis maris MCS10]
          Length = 417

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 41/367 (11%), Positives = 92/367 (25%), Gaps = 24/367 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           +++P   +   ++                ++L A+K   A  +   L++        +S+
Sbjct: 16  VESPVVCVRPDRVAEAGRWFQDNFPG---EVLYAVKANPAPWILQALHKAGTRFFDVASI 72

Query: 61  YEVMLGHEKFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E+ L  E       A+ +       I          IF    +    K   +  H    
Sbjct: 73  PEIQLVAEHCPDSRMAFLHPVKSRESIRRAYYEFGVRIFALDCEAELAKILEETNHADDV 132

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177
             +      +   +      F     +  + I +   +    G+ FH   +      + +
Sbjct: 133 TLVVRLAVSNDGAMFSLAGKFGAPAYEAAELIRTARAHAFELGVSFHVGSQCMQPSAYRS 192

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI 237
            +    +        ++ + +GGG                +    + +   + LE  +  
Sbjct: 193 AMLEASRLIAQAGVTVDIVDVGGGFPSIYPGMQPPPMDDYVAAIEDAFEEMMVLENADLW 252

Query: 238 VTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN------------- 284
                 L      +   ++        +       L     A                  
Sbjct: 253 CEPGRALVAEAESVLTRVELRKGDALYLNDGAYGRLFDAAHAKWPFPVRLHRRRSTGPRD 312

Query: 285 ---TGPYTAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                  +    G +C + D   G F     ++ GD I    +  Y       FNG    
Sbjct: 313 ESSEQTASFRFFGPTCDSLDAIPGPFELPADIREGDVIEIGMLGAYGTALATDFNGFGTI 372

Query: 341 TIAVKNV 347
                  
Sbjct: 373 ERVAVED 379


>gi|145345663|ref|XP_001417323.1| Ornithine decarboxylase [Ostreococcus lucimarinus CCE9901]
 gi|144577550|gb|ABO95616.1| Ornithine decarboxylase [Ostreococcus lucimarinus CCE9901]
          Length = 547

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 59/368 (16%), Positives = 104/368 (28%), Gaps = 40/368 (10%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67
           ++D   +    D      K   V+   A+KC    G+  TL     G   +S  EV L  
Sbjct: 140 IVDLATVKALYD-YHKA-KLPRVRPHFAVKCLPDRGIISTLAALGAGFDCASQGEVELVT 197

Query: 68  E-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSV 126
                 E        K       ++  +       S     K  A K+  K+ LRI    
Sbjct: 198 GLGVPSERIILAHPVKRPCDLRCIAEYEVPYTTFDSVSELHKILASKVKVKLILRIRADD 257

Query: 127 SYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF 186
             ++  L            +          +V G+ FH    +++   +   ++   K F
Sbjct: 258 PMARLPLGAKYGAPLDKVSELLSVAALLNLDVAGVSFHVGSSSRNPDAYRNAIQFARKIF 317

Query: 187 ---GHFITQIEWISLGGGIHFTDKDYPVKDFC----QRLKEFSEKYSV--------QIYL 231
                    +  + +GGG   +               R+++  ++           QI  
Sbjct: 318 DEAKEIGFNMHLLDIGGGFTGSFDANGNVTEAPSNFDRVRDALDEIFPDDGTFEGLQIID 377

Query: 232 EPGEAIVTNTTTLNTTV----------LDISENIKNLVIVDSSVEAHVPDYLLYQES--- 278
           EPG        T+   V           +   +      +  S    + D L        
Sbjct: 378 EPGRYFAQAPVTMACLVYGTREGTNDAGERHMDYYITDGLYGSFNGIIYDGLDLPTYFLQ 437

Query: 279 ---------ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
                         +    ++ V G +C + D          +  GD + F D   Y + 
Sbjct: 438 PNKVAPLAGIDNDFDKIKISSTVYGPTCDSLDCVMRNIPLPELSNGDWLMFPDAGAYTMA 497

Query: 330 RKNWFNGI 337
               FNGI
Sbjct: 498 GACDFNGI 505


>gi|209964659|ref|YP_002297574.1| lysine [Rhodospirillum centenum SW]
 gi|209958125|gb|ACI98761.1| lysine [Rhodospirillum centenum SW]
          Length = 395

 Score =  131 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 59/367 (16%), Positives = 114/367 (31%), Gaps = 26/367 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEV 63
           P Y     +L       +         +L A+KC     + D L         ++SL E+
Sbjct: 20  PVYCYRPDELTARARQFVSAFPG---HVLYAVKCNPEPLVLDALWAGGIRHFDTASLQEI 76

Query: 64  MLGHEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
            L    F      +     +   +           F    +    K  A+    +    +
Sbjct: 77  ELVKGHFAAGGCYFMHPVKQRGAVRDAYERMGVRTFVVDHRDELEKVTAETGGARDVTVV 136

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIE-SEIKNVN-GLMFHNNCENKSFLCFSAMLK 180
               +     + D    F    E+  D +  +  + +  GL FH   +  +   ++A L+
Sbjct: 137 VRLATARGAAVYDLGGKFGCTVEQGADLLRTAAGRGLKVGLCFHVGSQCLNPGSYTAALR 196

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSE----KYSVQIYLEP 233
                      ++  I +GGG        +  P++D+   ++   E         ++ EP
Sbjct: 197 LAAACQDLAGAELAVIDVGGGFPTAYVGHEPPPLEDYMAAIRTGLETLRRPEGCAVWCEP 256

Query: 234 GEAIVTNTTTLNTTV-------LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286
           G  +V    +L   V       L +++ +   +        H+P   +         +  
Sbjct: 257 GRGLVATGASLVVRVELRRDRHLYLNDGLYGSLCDLKFPGIHMP---MRAVRPGHAFSDE 313

Query: 287 PYTAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
                + G +C   D   G +     ++ GD I       Y    + WFNG   P  AV+
Sbjct: 314 LVPFGLFGPTCDCYDQMPGPYMLPADIREGDWIEIGQCGAYTTATRTWFNGF-FPGRAVR 372

Query: 346 NVDGTIK 352
             D    
Sbjct: 373 VDDSAFL 379


>gi|290959859|ref|YP_003491041.1| decarboxylase [Streptomyces scabiei 87.22]
 gi|260649385|emb|CBG72500.1| putative decarboxylase [Streptomyces scabiei 87.22]
          Length = 487

 Score =  131 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 56/406 (13%), Positives = 114/406 (28%), Gaps = 44/406 (10%)

Query: 3   KTPYY-LIDKQKLLNNLDTALYIRK-----NAGVKLLLALKCFAAWGMFDTLNQYMDGTT 56
            TP   L+D   +  +                 V    A+K      +   L +   G  
Sbjct: 69  GTPVVALLDVNGIRASAGALRRAFDAVTAPGTPVLHAFAVKATPLVPVLRLLREAGIGAE 128

Query: 57  SSSLYEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114
            +S  E+ L          T   + A    E+   L+    +  +   +L++     +  
Sbjct: 129 VASAGELALARAAGVSPRRTVLDSPAKTPAELREALALGIAVNADNPQELDRIDALVRSA 188

Query: 115 --HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFH 164
                +G+R+NP V              S+ G   +D        +   +   ++ L  H
Sbjct: 189 TTRSPVGIRVNPQVGSGAIGALSTATATSKFGVALRDEGAREWVVQAYLDRPWLSRLHAH 248

Query: 165 NNCE----NKSFLCFSAMLKNIEKEFGHFIT-QIEWISLGGGIHFTDKDYPVKDFCQRLK 219
           +  +    +      +   +  E+        QI+ I +GGG+             ++  
Sbjct: 249 SGSQGMPLSLMTRGITETYELAEEINRRIGRRQIDTIDIGGGLPVNFASEAATPTYEQYA 308

Query: 220 EFSEKY-------SVQIYLEPGEAIVTNTTTLNTTVLDIS---------ENIKNLVIVDS 263
               +           +  E G +++    ++   V              +    V   +
Sbjct: 309 RLLAEAVPGLFDGRYGLVTEFGRSLLAKHGSIVARVEYTKSAGGRAIAVTHAGVQVATRT 368

Query: 264 SVEAHVPDYLLYQESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFED 322
                     +    A      GP     V G +C AGD+  E      ++ GD  +  D
Sbjct: 369 VYAPGSWPLRIAAYDAKGRVKNGPVAVQDVAGPACFAGDLLAEGRPLPLLEPGDYAAALD 428

Query: 323 VAGYNINRKNWFNGINMPTIAVK---NVDGTIKAIRE-FSYNDYYN 364
              Y       +N +  P I      +       +R+  +      
Sbjct: 429 TGAYYFAHHYAYNSLPRPGIYGYAPGDGRTRFAVVRQAQTVEQIVA 474


>gi|2641952|dbj|BAA23593.1| antizyme inhibitor [Homo sapiens]
          Length = 448

 Score =  131 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 57/371 (15%), Positives = 108/371 (29%), Gaps = 31/371 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  K++        +     +K    +KC +A  + + L     G   SS  E+ L
Sbjct: 40  FFVGDLGKIVKKHSQWQNVVAQ--IKPFYTVKCNSAPAVLEILAALGTGFACSSKNEMAL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             E     E   Y    K        +     I    +++   K      + K+ L I  
Sbjct: 98  VQELGVPPENIIYISPCKQVSQIKYAAKVGVNILTCDNEIELKKIARNHPNAKVLLHIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             +              +      +  +     + G+ FH +   K    +   L +   
Sbjct: 158 EDNIGGEEGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARC 217

Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238
            F   G     +  + +GGG      +   V      L    F E   V+I  EPG   V
Sbjct: 218 VFDMAGEIGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDIYFPEGSGVKIISEPGSYYV 277

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE--------------------- 277
           ++  TL   ++       +                +Y                       
Sbjct: 278 SSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVYGSFASKLSEDLNTIPE 337

Query: 278 -SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                  +   +T+ + G SC   D   E      + +GD + F+++   + +  + FN 
Sbjct: 338 VHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSFHEPSAFND 397

Query: 337 INMPTIAVKNV 347
              P I     
Sbjct: 398 FQRPAIYYMMS 408


>gi|21361583|ref|NP_056962.2| antizyme inhibitor 1 [Homo sapiens]
 gi|22538418|ref|NP_680479.1| antizyme inhibitor 1 [Homo sapiens]
 gi|114621174|ref|XP_001154633.1| PREDICTED: ornithine decarboxylase antizyme inhibitor isoform 2
           [Pan troglodytes]
 gi|114621176|ref|XP_001154692.1| PREDICTED: ornithine decarboxylase antizyme inhibitor isoform 3
           [Pan troglodytes]
 gi|114621178|ref|XP_001154750.1| PREDICTED: antizyme inhibitor 1 isoform 4 [Pan troglodytes]
 gi|114621180|ref|XP_519894.2| PREDICTED: antizyme inhibitor 1 isoform 5 [Pan troglodytes]
 gi|33860187|sp|O14977|AZIN1_HUMAN RecName: Full=Antizyme inhibitor 1; Short=AZI; AltName:
           Full=Ornithine decarboxylase antizyme inhibitor
 gi|16807144|gb|AAH13420.1| Antizyme inhibitor 1 [Homo sapiens]
 gi|19483826|gb|AAH19279.1| Antizyme inhibitor 1 [Homo sapiens]
 gi|30582555|gb|AAP35504.1| ornithine decarboxylase antizyme inhibitor [Homo sapiens]
 gi|48145607|emb|CAG33026.1| OAZIN [Homo sapiens]
 gi|61362209|gb|AAX42178.1| ornithine decarboxylase antizyme inhibitor [synthetic construct]
 gi|61362216|gb|AAX42179.1| ornithine decarboxylase antizyme inhibitor [synthetic construct]
 gi|119612257|gb|EAW91851.1| antizyme inhibitor 1, isoform CRA_a [Homo sapiens]
 gi|119612259|gb|EAW91853.1| antizyme inhibitor 1, isoform CRA_a [Homo sapiens]
 gi|123979642|gb|ABM81650.1| antizyme inhibitor 1 [synthetic construct]
 gi|123982780|gb|ABM83131.1| antizyme inhibitor 1 [synthetic construct]
 gi|123982782|gb|ABM83132.1| antizyme inhibitor 1 [synthetic construct]
 gi|123997449|gb|ABM86326.1| antizyme inhibitor 1 [synthetic construct]
          Length = 448

 Score =  131 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 57/371 (15%), Positives = 108/371 (29%), Gaps = 31/371 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  K++        +     +K    +KC +A  + + L     G   SS  E+ L
Sbjct: 40  FFVGDLGKIVKKHSQWQNVVAQ--IKPFYTVKCNSAPAVLEILAALGTGFACSSKNEMAL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             E     E   Y    K        +     I    +++   K      + K+ L I  
Sbjct: 98  VQELGVPPENIIYISPCKQVSQIKYAAKVGVNILTCDNEIELKKIARNHPNAKVLLHIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             +              +      +  +     + G+ FH +   K    +   L +   
Sbjct: 158 EDNIGGEEGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARC 217

Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238
            F   G     +  + +GGG      +   V      L    F E   V+I  EPG   V
Sbjct: 218 VFDMAGEIGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDIYFPEGSGVKIISEPGSYYV 277

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE--------------------- 277
           ++  TL   ++       +                +Y                       
Sbjct: 278 SSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVYGSFASKLSEDLNTIPE 337

Query: 278 -SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                  +   +T+ + G SC   D   E      + +GD + F+++   + +  + FN 
Sbjct: 338 VHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSFHEPSAFND 397

Query: 337 INMPTIAVKNV 347
              P I     
Sbjct: 398 FQRPAIYYMMS 408


>gi|317055732|ref|YP_004104199.1| Orn/DAP/Arg decarboxylase 2 [Ruminococcus albus 7]
 gi|315448001|gb|ADU21565.1| Orn/DAP/Arg decarboxylase 2 [Ruminococcus albus 7]
          Length = 392

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 49/372 (13%), Positives = 102/372 (27%), Gaps = 32/372 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP Y+ D                +  V L  ++K      +   L +        S  
Sbjct: 13  LGTPCYIFDTDVFAKRAAAVKNAFGDR-VGLCYSIKANPF--LLAALPEEFSYIEVCSPG 69

Query: 62  EVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+ +  +     +   ++   K  +    A           +        + A K   ++
Sbjct: 70  ELSICENVGAPLDKIIFSGVNKTGEDIARAYADGVAIFTAESRLHAELINECAVKNGGRV 129

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
            L +  +               S L +    + +     + GL +    +          
Sbjct: 130 KLILRLAHGSQ------FGMDKSDLLDIIDRREQFAGVEIIGLHYFTGTQKTKVKTIEKE 183

Query: 179 L----KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF--------CQRLKEFSEKYS 226
           L    +   +       +   I  G G+         +             ++ F+EKY 
Sbjct: 184 LALLDELCAELENEHGYKPSHIEYGTGLAVEYYKDFTESTDIALLEEASAVIRPFAEKYP 243

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-----DYLLYQESATI 281
           + +  E G        +  T ++DI        ++      HV        +       I
Sbjct: 244 LTV--EMGRFFAAECGSYLTKIMDIKTTNDLKYVICDGGINHVNYYGQNMAMKVPPIEVI 301

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGINMP 340
                     +CG  C   DI         ++ GD I+F     Y++      F   +MP
Sbjct: 302 EKTGEEKDYCLCGSLCTTADILVRKATLPTLERGDIIAFSKCGAYSVAEGIAAFLSRDMP 361

Query: 341 TIAVKNVDGTIK 352
            +A+ +    + 
Sbjct: 362 AVALFSEKDGLV 373


>gi|254420313|ref|ZP_05034037.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein
           [Brevundimonas sp. BAL3]
 gi|196186490|gb|EDX81466.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein
           [Brevundimonas sp. BAL3]
          Length = 399

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 40/343 (11%), Positives = 90/343 (26%), Gaps = 19/343 (5%)

Query: 23  YIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAYNVAY 81
           + + N    +  A+K   +  + +TL +    G   +S+ E+ L          A+    
Sbjct: 12  WFQDNLKADVFYAVKANPSRWVIETLIEAGVRGFDVASIAEIELVRSVSHDVRLAFMHPV 71

Query: 82  KDCEIDAVLSNCDTIIFNTVSQLNKFKDK------AQKLHKKIGLRINPSVSYSKFILAD 135
           K             +   ++  +++          A  L+  + + ++   +        
Sbjct: 72  KSRSAITKAYFEHGVRTFSLDCVDELNKILDATGGADDLNLIVRMAVSADGAAYTLSGKF 131

Query: 136 PNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEW 195
                           ++    + G+ FH   +      + A +  + +        ++ 
Sbjct: 132 GVPADQAPALLLAT-RQAVKDGLMGVSFHVGSQCMRPTAYQAAMAQVGRSISRAGVIVDI 190

Query: 196 ISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI 255
           + +GGG           D  +        ++     E  E        +      I   +
Sbjct: 191 VDVGGGFPSVYPGMVPPDMSEYADAIHRGFNEMPVSETTELWCEPGRAIVAESSSILARV 250

Query: 256 KNLVIVDSSVEA-----HVPDYLLYQESATIYPNTGP-----YTAMVCGRSCLAGDIF-G 304
                    +                   T     G            G +C + D   G
Sbjct: 251 DLRKGDALYLNDGSYGSLFDATHSRWPFPTKLVRDGEAASELKAFQFYGPTCDSIDHMPG 310

Query: 305 EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
            F     ++ GD I    +  Y +     FNG     IA+   
Sbjct: 311 PFWLPADIREGDFIEIGMLGAYGVAMSTGFNGYGEHDIAIVED 353


>gi|308803236|ref|XP_003078931.1| ornithine decarboxylase (ISS) [Ostreococcus tauri]
 gi|116057384|emb|CAL51811.1| ornithine decarboxylase (ISS) [Ostreococcus tauri]
          Length = 406

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 55/357 (15%), Positives = 97/357 (27%), Gaps = 38/357 (10%)

Query: 19  DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAY 77
           ++     K   V+   A+KC    G+  TL     G   +S  EV L        E    
Sbjct: 8   NSWRSTAKLPRVRPHFAVKCLPDKGIISTLAALGAGFDCASQGEVELVTSLGVPSERIIL 67

Query: 78  NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPN 137
               K       ++          S     K  A ++  K+ LRI      ++  L    
Sbjct: 68  AHPVKRPCDLRCIAEYQVPYTTFDSVSELHKILASQVDVKLVLRIRADDPMARLPLGAKY 127

Query: 138 RPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIE 194
                   +          ++ G+ FH    +++   +   +K     F        ++ 
Sbjct: 128 GAPLDKVSELLSVAALLNLDIAGVSFHVGSSSRNPDAYRNAIKYARDIFDEATSMGFKMH 187

Query: 195 WISLGGGI----------HFTDKDYPVKDFC--QRLKEFSEKYSVQIYLEPGEAIVTNTT 242
            + LGGG                ++        +   +      +QI  EPG        
Sbjct: 188 LLDLGGGFTGSFDANGNVSEAPSNFDRVREALDEIFPDDGTFEGLQIIDEPGRYFAQAPV 247

Query: 243 TLNTTV----------LDISENIKNLVIVDSSVEAHVPDYLLYQESA------------T 280
           T+   V           +   +      +  S    + D L                   
Sbjct: 248 TMACLVYGKREGSNDNGERQLDYYITDGLYGSFNGIIYDGLDLPTYFLQPNKVAPLAGLE 307

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                   ++ V G +C + D          +  GD + F D   Y +     FNGI
Sbjct: 308 NEFEKTKISSTVYGPTCDSLDCVMRNVPLPELSNGDWLMFPDAGAYTMAGACDFNGI 364


>gi|329113279|ref|ZP_08242062.1| Lysine/ornithine decarboxylase [Acetobacter pomorum DM001]
 gi|326697420|gb|EGE49078.1| Lysine/ornithine decarboxylase [Acetobacter pomorum DM001]
          Length = 437

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 48/357 (13%), Positives = 103/357 (28%), Gaps = 27/357 (7%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP  ++D   + +              ++  A+K   A  +   L +      ++S  EV
Sbjct: 77  TPCLVLDVDAVADRYHALGKAL--PQARIYYAVKANPAQPILRRLVELGSCFDAASWEEV 134

Query: 64  MLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            L        +  ++            A  +     +F+   +L K    A        L
Sbjct: 135 SLCLQAGASPDAISFGNTVKKVSAIRAAYEAGVRIFVFDCREELEKLAVHAPGSRVYCRL 194

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
            +      +++ L+          ++          +  GL FH   +  S   +   + 
Sbjct: 195 LV--DNYGAEWPLSRKFGTTVESAKELMLAARELGLDPYGLSFHVGSQQLSAEAYEVAIA 252

Query: 181 NIEKEF---GHFITQIEWISLGGGIHFTD----KDYPVKDFC--QRLKEFSEKYSVQIYL 231
                F         +  ++LGGG          +         + + E       ++ +
Sbjct: 253 RAAALFTDLSAAGLDLRMVNLGGGFPIRYRDDVPEIDHFTTAIFRAMTEHFGNALPEMLV 312

Query: 232 EPGEAIVTNTTTLNTTVLDI----SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287
           EPG  IV     + + V+ +     ++    V +D      + +         I  +   
Sbjct: 313 EPGRFIVGEAGVVRSEVVLVSARGRKDGLRWVYLDIGRFGGLAETENESIRYAIRTSRDG 372

Query: 288 YT---AMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINR-KNWFNGI 337
                  + G +C   DI  E   +     +  G+++       Y        FNG 
Sbjct: 373 SPTGRVALAGPTCDGADIMYEKTHYELPLDLAAGEQVDLLGAGAYVSTYCATGFNGF 429


>gi|83941446|ref|ZP_00953908.1| hypothetical protein EE36_04418 [Sulfitobacter sp. EE-36]
 gi|83847266|gb|EAP85141.1| hypothetical protein EE36_04418 [Sulfitobacter sp. EE-36]
          Length = 150

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 88/150 (58%), Positives = 113/150 (75%)

Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
           +K  S+ Y VQ+YLEPGEA +T   TL TTVLD   N KNL IVDSS+EAH+ D L+Y+E
Sbjct: 1   MKTLSDTYGVQVYLEPGEAAITGAATLETTVLDTLHNGKNLAIVDSSIEAHMLDLLIYRE 60

Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
            A + PNTG +  M+CG+SCLAGDIFGEF F+ P+K GDRISF+D AGY + +KNWFNG+
Sbjct: 61  PAKVAPNTGDHDWMICGKSCLAGDIFGEFKFDAPLKPGDRISFQDAAGYTMVKKNWFNGV 120

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367
            MP IA++ +DGTI ++R F Y D+ + LS
Sbjct: 121 KMPGIAIRELDGTITSVRSFDYEDFKSALS 150


>gi|332214026|ref|XP_003256127.1| PREDICTED: antizyme inhibitor 1 [Nomascus leucogenys]
          Length = 448

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 57/371 (15%), Positives = 108/371 (29%), Gaps = 31/371 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  K++        +     +K    +KC +A  + + L     G   SS  E+ L
Sbjct: 40  FFVGDLGKIVKKHSQWQNVVAQ--IKPFYTVKCNSAPAVLEILAALGTGFACSSKNEMAL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             E     E   Y    K        +     I    +++   K      + K+ L I  
Sbjct: 98  VQELGVPPENIIYISPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             +              +      +  +     + G+ FH +   K    +   L +   
Sbjct: 158 EDNIGGEEGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARC 217

Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238
            F   G     +  + +GGG      +   V      L    F E   V+I  EPG   V
Sbjct: 218 VFDMAGEIGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDIYFPEGSGVKIISEPGSYYV 277

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE--------------------- 277
           ++  TL   ++       +                +Y                       
Sbjct: 278 SSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVYGSFASKLSEDLNTIPE 337

Query: 278 -SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                  +   +T+ + G SC   D   E      + +GD + F+++   + +  + FN 
Sbjct: 338 VHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSFHEPSAFND 397

Query: 337 INMPTIAVKNV 347
              P I     
Sbjct: 398 FQRPAIYYMMS 408


>gi|295691122|ref|YP_003594815.1| Orn/DAP/Arg decarboxylase 2 [Caulobacter segnis ATCC 21756]
 gi|295433025|gb|ADG12197.1| Orn/DAP/Arg decarboxylase 2 [Caulobacter segnis ATCC 21756]
          Length = 419

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 46/336 (13%), Positives = 94/336 (27%), Gaps = 18/336 (5%)

Query: 20  TALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAYN 78
            A + +      +  A+K   +  +   L Q        +SL EV L   +  G   A+ 
Sbjct: 31  AARWFQSEFKGDVFYAVKANPSPWVIRELAQAGVRSFDVASLNEVELVANEAPGSRMAFM 90

Query: 79  VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGLRINPSVSYSKFILADP 136
              K     A       +   +     +      A    K + L +   V       +  
Sbjct: 91  HPVKSRAAIAAAYFDHGVKTFSFDTHEELAKILDATGQAKDLNLIVRMGVQAEGAAYSLS 150

Query: 137 NRPFSRLGEKCKDKIES--EIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIE 194
            +            + +    +++ G+ FH   +      F A +    +         +
Sbjct: 151 GKFGVESHNAPALLLAARRATQDLMGVSFHVGSQCMRPTAFQAAMAQASRALVRAGVLAD 210

Query: 195 WISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTT----VLD 250
            + +GGG           D  + L      ++  +  E  E        L       ++ 
Sbjct: 211 VVDVGGGFPSIYPGMVPPDLSEYLAAIDRGFAEMMVHETTELWCEPGRALVAEASSLLVK 270

Query: 251 ISENIKNLVIVDSSVEAHVPDYLLYQESATI--------YPNTGPYTAMVCGRSCLAGDI 302
           +     + + ++      + D    +    +            G       G +C + D 
Sbjct: 271 VELKKGDALYLNDGSYGSLFDAAHMKWPFPVKLFRKNGEVVEEGLKPFRFYGPTCDSVDH 330

Query: 303 F-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
             G F+  + V  GD I    +  Y +     FNG 
Sbjct: 331 MPGPFYLPESVDEGDYIEIGMLGAYGVAMNTRFNGF 366


>gi|119627875|gb|EAX07470.1| arginine decarboxylase, isoform CRA_b [Homo sapiens]
          Length = 437

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 51/362 (14%), Positives = 118/362 (32%), Gaps = 37/362 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++       +++    V+   A+KC ++ G+   L Q   G + ++  E+ L
Sbjct: 18  FFVADLGAIVR--KHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 75

Query: 66  G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             H              K        +     + +  +++   K        K+ L I  
Sbjct: 76  VQHIGIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKMVLCIAT 135

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S+S   L+       +      +  +     V G+ FH          ++  + +   
Sbjct: 136 DDSHSLSCLSLKFGVSLKSCRHLLENAKKHHVEVVGVSFHIGSGCPDPQAYAQSIADARL 195

Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPGE 235
            F        ++  + LGGG   T+      +    +        F E   V I+ E G 
Sbjct: 196 VFEMGTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEGCGVDIFAELGR 255

Query: 236 AIVTNTTTLNTTVLDI-----------------------SENIKNLVIVDSSVEAHVPDY 272
             VT+  T+  +++                           +     I +S +  ++   
Sbjct: 256 YYVTSAFTVAVSIIAKKEVLLDQPGREEENGSTSKTIVYHLDEGVYGIFNSVLFDNICPT 315

Query: 273 LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
            + Q+  +       Y++ + G +    D   E  +   + +GD + F+++  Y +   +
Sbjct: 316 PILQKKPSTEQP--LYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNMGAYTVGMGS 373

Query: 333 WF 334
            F
Sbjct: 374 PF 375


>gi|68473782|ref|XP_718994.1| hypothetical protein CaO19.6032 [Candida albicans SC5314]
 gi|68473991|ref|XP_718892.1| hypothetical protein CaO19.13453 [Candida albicans SC5314]
 gi|2499344|sp|P78599|DCOR_CANAL RecName: Full=Ornithine decarboxylase; Short=ODC
 gi|1814084|gb|AAC49877.1| ornithine decarboxylase [Candida albicans]
 gi|46440685|gb|EAK99988.1| hypothetical protein CaO19.13453 [Candida albicans SC5314]
 gi|46440791|gb|EAL00093.1| hypothetical protein CaO19.6032 [Candida albicans SC5314]
          Length = 473

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 59/385 (15%), Positives = 115/385 (29%), Gaps = 56/385 (14%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  +++N+++    I     V+   A+KC +   +  TL++       +S  E+ L
Sbjct: 77  FFVCDLGEIINSVNQWQQIL--PMVQPYYAVKCNSNPQILTTLSELGVNFDCASKNEIDL 134

Query: 66  GHEKF---GGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
                     E   Y    K           N +    + V +L K           I L
Sbjct: 135 VLSLGIHQAHERIIYANPCKTNSFIRHAADENVNLTTVDNVHELYKLAKFHPHCKILIRL 194

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
             + S +  +          + +GE      +     V+G+ FH     K F      +K
Sbjct: 195 ITDDSTAQCQLSTKFGCDLNTAIGEILPKA-KELGLQVHGVAFHVGSGAKDFSSIYQAIK 253

Query: 181 NIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS-----EKYSVQIYLE 232
           +    F          + + +GGG          +     L++F      +   ++   E
Sbjct: 254 DSRILFDEMLSMGFTPKLLDIGGGFERETFPQSSQMVKFALEKFFPIEFSQSNEIKFIAE 313

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------------------AHVPDY 272
           PG  +V N  TL T ++   +        ++ +                      H    
Sbjct: 314 PGRFMVANAFTLITHIIARRDLPTGGNNNNNDMTPSAMLYINDGVYGNLNCILFDHQTPK 373

Query: 273 LLYQESATIYPNTGP-------------------YTAMVCGRSCLAGDIFGEFHFEKP-V 312
           +    +                            +   + G +C   D           V
Sbjct: 374 VYVLTNENQLFYKQEMMRSLSVNNNNNNNNKTDGFKFSIWGPTCDGLDCVSSLAKLSKNV 433

Query: 313 KIGDRISFEDVAGYNINRKNWFNGI 337
           ++GD + FE+V  Y       FNG+
Sbjct: 434 QVGDWLFFENVGAYTSCASTKFNGL 458


>gi|330722436|gb|EGH00276.1| Diaminopimelate decarboxylase [gamma proteobacterium IMCC2047]
          Length = 198

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 64/189 (33%), Gaps = 8/189 (4%)

Query: 186 FGHFITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEKYSVQIYLEPGEAIVTNTT 242
                  +  + LGGG+  T  +        +   + E  +   + +  EPG +I  N  
Sbjct: 7   LAEDQITLHHLDLGGGLGVTYDNEKPPHPSEYAAAIVEKLKGRDLTLIFEPGRSIAANAG 66

Query: 243 TLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESAT---IYPNTGPYTAMVCGRSCL 298
            L T V  +     KN  +VD+++   +   L     A       +   +   + G  C 
Sbjct: 67  ILVTEVALLKHTADKNFAVVDAAMNDLIRPALYQAWQAIEAVKPRHGATHRYDIVGPICE 126

Query: 299 AGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFS 358
            GD  G+      ++ GD ++      Y     + +N  N     + + +      R  S
Sbjct: 127 TGDFLGKDRELS-LEAGDLLAIRSSGAYGFTMSSNYNSRNRAAEIIVDGEQCHVVRRRES 185

Query: 359 YNDYYNNLS 367
           + D     S
Sbjct: 186 FADQIALES 194


>gi|326404575|ref|YP_004284657.1| putative lysine/ornithine decarboxylase [Acidiphilium multivorum
           AIU301]
 gi|325051437|dbj|BAJ81775.1| putative lysine/ornithine decarboxylase [Acidiphilium multivorum
           AIU301]
          Length = 376

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 56/368 (15%), Positives = 110/368 (29%), Gaps = 33/368 (8%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           M+ TP  L+D  ++    + A          +  A+K   A  + D L        ++S+
Sbjct: 13  MVSTPAILVDLDRVAA--NFAALRAALPDAAIYYAVKANPAAPVLDRLVGLGSRFDAASI 70

Query: 61  YEVM-LGHEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+             ++      +    +A     D   F++  +L+K    A      
Sbjct: 71  EEIRACLAAGAAPAAISFGNTVKKRAAIAEAHARGVDLFAFDSDEELDKLAAAAPGAKVY 130

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN---VNGLMFHNNCENKSFLC 174
             L ++             +R F   G   +D +    +      G+ FH   +      
Sbjct: 131 CRLAVSQDG-----ADWPLSRKFGTSGTHARDLLVRAAERGLIPWGVSFHVGSQQTGVGA 185

Query: 175 FSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK------DFCQRLKEFSEKY 225
           +         +  +       +  ++LGGG     +D               +++     
Sbjct: 186 WRTAIGQAAAVFTDLRARGIDLRLLNLGGGFPTRYRDDIPPLGDFGAAIMDAVRQAFGNN 245

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENI----KNLVIVDSSVEAHVPDYLLYQESATI 281
              + +EPG AIV +     + V+          +  V +D      + +         I
Sbjct: 246 VPDLLIEPGRAIVGDAGVAVSEVVLACTRHEDEGRRWVYLDLGRFGGLAETEGEAIRYRI 305

Query: 282 YPN---TGPYTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKNW-F 334
                      A++ G SC   D+            +  GDR+   D   Y  +  +  F
Sbjct: 306 TAPGVAGADAPAVLAGPSCDGVDVMYRETPCPLPASLAAGDRVLIHDTGAYVTSYASQGF 365

Query: 335 NGINMPTI 342
           NG   P  
Sbjct: 366 NGFLPPEE 373


>gi|325923438|ref|ZP_08185098.1| diaminopimelate decarboxylase [Xanthomonas gardneri ATCC 19865]
 gi|325546083|gb|EGD17277.1| diaminopimelate decarboxylase [Xanthomonas gardneri ATCC 19865]
          Length = 431

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 49/355 (13%), Positives = 104/355 (29%), Gaps = 31/355 (8%)

Query: 21  ALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGGETHAY-NV 79
            +  +  A  +L  A K  A   +  TL  +MDG  ++S  E+   H++       +   
Sbjct: 41  WMRAQLPAECELFYAAKANAEPPILRTLAPHMDGFEAASGGELAWLHQQQPQAALLFGGP 100

Query: 80  AYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRINPS---VSYSKFILAD 135
              D E+    +  D  +   ++ +L +    A +  + + + +  +          L  
Sbjct: 101 GKLDSELAQAAALPDCTVHVESLGELERLATIAAQAGRCVPVFLRMNIAVPGAQSTRLMM 160

Query: 136 PNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKSFLCFSAMLKNI----EK 184
             +P    G    D   +  +        + G  FH     +       ++       ++
Sbjct: 161 GGQPSP-FGLDPDDLDAAIHRLRASPSLRLEGFHFHLMSHQRDAGAQLHLIAAYLRTVQQ 219

Query: 185 EFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSV--QIYLEPGEAIV 238
               +      ++ GGG           +    FC  L     ++    ++ LEPG  + 
Sbjct: 220 WRQRYGLGPLRVNAGGGFGVDYLAPESSFDWAGFCAGLPALLGEHGDALRLRLEPGRYVS 279

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPNTG------PYTAM 291
            +       VLD+  +      +      H         +                    
Sbjct: 280 ASCGWYLMEVLDLKRSHGAWFAIARGGTHHFRTPAAQGHDHPFRVLRGARAPVLRDTPVT 339

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIAVK 345
           + G+ C   D+         +  GD ++F     Y  N  +  F     P +   
Sbjct: 340 LVGQLCTPKDVLARNQPVAALAPGDCLAFPLAGAYAWNISHQQFLMHPPPQMVFL 394


>gi|197101860|ref|NP_001126321.1| antizyme inhibitor 1 [Pongo abelii]
 gi|75061736|sp|Q5R7K3|AZIN1_PONAB RecName: Full=Antizyme inhibitor 1; Short=AZI; AltName:
           Full=Ornithine decarboxylase antizyme inhibitor
 gi|55731083|emb|CAH92257.1| hypothetical protein [Pongo abelii]
          Length = 448

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 57/371 (15%), Positives = 108/371 (29%), Gaps = 31/371 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  K++        +     +K    +KC +A  + + L     G   SS  E+ L
Sbjct: 40  FFVGDLGKIVKKHSQWQNVVAQ--IKPFYTVKCNSAPAVLEILAALGTGFACSSKNEMAL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             E     E   Y    K        +     I    +++   K      + K+ L I  
Sbjct: 98  VQELGVPPENIIYISPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             +              +      +  +     + G+ FH +   K    +   L +   
Sbjct: 158 EDNIGGEEGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARC 217

Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238
            F   G     +  + +GGG      +   V      L    F E   V+I  EPG   V
Sbjct: 218 VFDMAGEIGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDVYFPEGSGVKIISEPGSYYV 277

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE--------------------- 277
           ++  TL   ++       +                +Y                       
Sbjct: 278 SSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVYGSFASKLSEDLNTIPE 337

Query: 278 -SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                  +   +T+ + G SC   D   E      + +GD + F+++   + +  + FN 
Sbjct: 338 VHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSFHEPSAFND 397

Query: 337 INMPTIAVKNV 347
              P I     
Sbjct: 398 FQRPAIYYMMS 408


>gi|256396113|ref|YP_003117677.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Catenulispora acidiphila DSM 44928]
 gi|256362339|gb|ACU75836.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Catenulispora acidiphila DSM 44928]
          Length = 408

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 56/375 (14%), Positives = 108/375 (28%), Gaps = 34/375 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP++  D+  L + L    +    AGV L  A+K      +   L+  +DG   +S  E+
Sbjct: 35  TPFFAYDRGLLADRLAAVRHALP-AGVHLSYAVKANPMPALLHHLSALVDGFDVASGLEL 93

Query: 64  MLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
               +     E  ++        EI   +++  T+   +  +L + +  A ++     + 
Sbjct: 94  RAALDTPVRPEKVSFAGPGKTVAEIRQAVASGVTVELESELELTRVRAAAAEIGVAARVA 153

Query: 122 INPSVS-YSKFILADPNRPFSRLGE------KCKDKIESEIKNVNGLMFHNNCENKSFLC 174
           +  +     +           + G            +  E     G       +N     
Sbjct: 154 VRVNPDFAVRGSGMRLGGGPQQFGVDSERVPDLLRLMAGEDLEFQGFHIFAGSQNLRAEE 213

Query: 175 ----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV--- 227
                   +  +     H  + + ++++GGG                + E   K +    
Sbjct: 214 ICEAQRRTVDLVVALAEHAPSPVRYVNVGGGFGIPYTARDTALDLAPIGENLAKLTDVVA 273

Query: 228 ------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY--------- 272
                 +I +E G  +V       T VLD  E+   + +V      H             
Sbjct: 274 AALPGARIAVELGRYLVGEAGVYVTRVLDRKESRGKVFLVVDGGLHHQLAASGNFGQTIR 333

Query: 273 -LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                  A     T      V G  C   D+ G+        +GD I       Y +   
Sbjct: 334 RNYPLAVANRIDETAAGKVSVVGCLCTPLDLLGDDVDLPAADVGDLIVLFQAGAYGLTAS 393

Query: 332 NW-FNGINMPTIAVK 345
              F     P   + 
Sbjct: 394 PTAFLSHPAPVEVLV 408


>gi|156550612|ref|XP_001604342.1| PREDICTED: similar to ENSANGP00000020224 [Nasonia vitripennis]
          Length = 405

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 54/362 (14%), Positives = 102/362 (28%), Gaps = 21/362 (5%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +++D   ++      +   K   V    A+KC     +   L         +S  E++
Sbjct: 34  PIHMLDVGDIIRKHQLWME--KMPRVVPYYAVKCNPDSTVIKVLAALGGHFDCASKQEII 91

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
               +    +   Y    K               +  +   +L K KD        I +R
Sbjct: 92  QTMSQGVSADRIIYANPMKFSSHIEYARKVGVAMMTADCEDELKKIKDVYPDAKIVIRIR 151

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS----A 177
            +  V+ +         P S    +           ++G  FH        +        
Sbjct: 152 CDTEVTTACLGEKFGCDPSSD-AVQLIKATLDLGLTLHGFSFHVGSPCGEPMAICRGILW 210

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIH--FTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
               I+         +  I +GGGI     D    +    + + E    Y    +     
Sbjct: 211 CKNLIDTAKAMGCRDVSLIDIGGGIPELINDALENIDSSIEIISEPGRYYVTSAFTSAAY 270

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ-ESATIYPNTGPYTAMVCG 294
                T         +      +         H+      +  ++T   N   Y + V G
Sbjct: 271 VFGKKTLMKENQKTFMYYVSDGVYGSFIEELLHIKARHPVRLTNSTSITNDEKYLSTVWG 330

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            +C + D+  + H      +GD +++ D+  Y+      FNG   P I           I
Sbjct: 331 PTCDSYDVLLKNHMLPEFNVGDWLAWSDIGSYSTCLSTEFNGFQAPKI--------HPII 382

Query: 355 RE 356
           R 
Sbjct: 383 RR 384


>gi|58265238|ref|XP_569775.1| ornithine decarboxylase [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|57226007|gb|AAW42468.1| ornithine decarboxylase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 527

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 58/407 (14%), Positives = 113/407 (27%), Gaps = 63/407 (15%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           ++  D   +   +         + V++  A+KC  +  +   L+        +S  E+  
Sbjct: 106 FFAADLSAVYQAVQMWRASPIGSRVEIFYAVKCNPSPAVLHLLSLMGTSFDCASSSEINQ 165

Query: 66  GH---EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
                    G+   +    K       A       + F+ V +L K K         + +
Sbjct: 166 VLSLPSAPSGDRIIFANPCKPASFIRTAAQRGVSMMTFDNVDELYKVKRICPNAKLVLRM 225

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
             + S S  +  L       S  G            NV G+ FH     K  + F+  + 
Sbjct: 226 LTDDSKSLCRLGLKFGAPVDSCPG--LLKVARQLGLNVVGVSFHVGSGCKDPMQFADAVW 283

Query: 181 NIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS-EKYSVQIYLEPGEA 236
              K F          + + +GGG          +        +  E   V+I  EPG  
Sbjct: 284 RARKVFDMGKEAGYNFDLLDIGGGFERETFAEMTQVLKDSFDLYFPEDSGVRIIAEPGRF 343

Query: 237 IVTNTTTLNTTVLDISE-----------------------NIKNLVIVDSSVEAHVPDYL 273
           +V++  TL T+++                                  V  S    + D+ 
Sbjct: 344 LVSSAFTLATSIIASRRAPKAEASQQVQAATQEDTKSADVMYYINDGVYGSFNCIMFDHQ 403

Query: 274 LYQESATIYPNTGP---------------------------YTAMVCGRSCLAGDIFGEF 306
           +         +                                  V G +C + D   + 
Sbjct: 404 IVHPHPLTIGHKLAIAAPPFPPPPNVQLEVDLPVQMGYKDVEKVSVWGPTCDSIDCVRQL 463

Query: 307 HFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352
                 + +GD I + ++  Y +   + FNG +     +    G  +
Sbjct: 464 VDLPKGMDVGDWIGWGEMGAYTLCAASTFNGFDRSP-VLWTTGGNTE 509


>gi|134109243|ref|XP_776736.1| hypothetical protein CNBC2270 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50259416|gb|EAL22089.1| hypothetical protein CNBC2270 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 527

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 58/407 (14%), Positives = 113/407 (27%), Gaps = 63/407 (15%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           ++  D   +   +         + V++  A+KC  +  +   L+        +S  E+  
Sbjct: 106 FFAADLSAVYQAVQMWRASPIGSRVEIFYAVKCNPSPAVLHLLSLMGTSFDCASSSEINQ 165

Query: 66  GH---EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
                    G+   +    K       A       + F+ V +L K K         + +
Sbjct: 166 VLSLPSAPSGDRIIFANPCKPASFIRTAAQRGVSMMTFDNVDELYKVKRICPNAKLVLRM 225

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
             + S S  +  L       S  G            NV G+ FH     K  + F+  + 
Sbjct: 226 LTDDSKSLCRLGLKFGAPVDSCPG--LLKVARQLGLNVVGVSFHVGSGCKDPMQFADAVW 283

Query: 181 NIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS-EKYSVQIYLEPGEA 236
              K F          + + +GGG          +        +  E   V+I  EPG  
Sbjct: 284 RARKVFDMGKEAGYNFDLLDIGGGFERETFAEMTQVLKDSFDLYFPEDSGVRIIAEPGRF 343

Query: 237 IVTNTTTLNTTVLDISE-----------------------NIKNLVIVDSSVEAHVPDYL 273
           +V++  TL T+++                                  V  S    + D+ 
Sbjct: 344 LVSSAFTLATSIIASRRAPKAEASQQVQAATQEDTKSADVMYYINDGVYGSFNCIMFDHQ 403

Query: 274 LYQESATIYPNTGP---------------------------YTAMVCGRSCLAGDIFGEF 306
           +         +                                  V G +C + D   + 
Sbjct: 404 IVHPHPLTIGHKLAIAAPPFPPPPNVQLEVDLPVQMGYKDVEKVSVWGPTCDSIDCVRQL 463

Query: 307 HFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352
                 + +GD I + ++  Y +   + FNG +     +    G  +
Sbjct: 464 VDLPKGMDVGDWIGWGEMGAYTLCAASTFNGFDRSP-VLWTTGGNTE 509


>gi|119627882|gb|EAX07477.1| arginine decarboxylase, isoform CRA_i [Homo sapiens]
          Length = 392

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 51/362 (14%), Positives = 118/362 (32%), Gaps = 37/362 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++       +++    V+   A+KC ++ G+   L Q   G + ++  E+ L
Sbjct: 18  FFVADLGAIVR--KHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 75

Query: 66  G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             H              K        +     + +  +++   K        K+ L I  
Sbjct: 76  VQHIGIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKMVLCIAT 135

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S+S   L+       +      +  +     V G+ FH          ++  + +   
Sbjct: 136 DDSHSLSCLSLKFGVSLKSCRHLLENAKKHHVEVVGVSFHIGSGCPDPQAYAQSIADARL 195

Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPGE 235
            F        ++  + LGGG   T+      +    +        F E   V I+ E G 
Sbjct: 196 VFEMGTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEGCGVDIFAELGR 255

Query: 236 AIVTNTTTLNTTVLDI-----------------------SENIKNLVIVDSSVEAHVPDY 272
             VT+  T+  +++                           +     I +S +  ++   
Sbjct: 256 YYVTSAFTVAVSIIAKKEVLLDQPGREEENGSTSKTIVYHLDEGVYGIFNSVLFDNICPT 315

Query: 273 LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
            + Q+  +       Y++ + G +    D   E  +   + +GD + F+++  Y +   +
Sbjct: 316 PILQKKPSTEQP--LYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNMGAYTVGMGS 373

Query: 333 WF 334
            F
Sbjct: 374 PF 375


>gi|255539092|ref|XP_002510611.1| ornithine decarboxylase, putative [Ricinus communis]
 gi|223551312|gb|EEF52798.1| ornithine decarboxylase, putative [Ricinus communis]
          Length = 416

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 51/361 (14%), Positives = 105/361 (29%), Gaps = 38/361 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y++D   +   +    + R+   ++   A+KC +   +   L         +S  E+  
Sbjct: 50  FYVLDLGAVAGLMH--KWSRELPMIQPYYAVKCNSEISLIGALAALGCNFDCASKAEIQS 107

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                   +   Y    K        +N D     F++  +L+K      K    I ++ 
Sbjct: 108 ILSLGVSPDRIIYANPSKPESHIIYAANVDVNLTTFDSKHELHKISKCHPKCSLLIRIKP 167

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSFLCFS 176
                             S+ G   ++     +        ++G+ FH   E+++   + 
Sbjct: 168 PDDSGA-------RWPLGSKFGALPEEIEPLLLAAQAAKLTISGVSFHIGSESRNPHAYR 220

Query: 177 AMLKNIEKEF----GHFITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIY 230
             +   +  F       +  +  +++GGG        +            F +   ++I 
Sbjct: 221 GAIGAAKHVFDTASRLGMPPMRVLNIGGGFIAGSNFDEAATVIKAALQDYFGDNPGIEII 280

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIV--------------DSSVEAHVPDYLLYQ 276
            EPG         L T++         +                   S  A VP      
Sbjct: 281 SEPGRYFAETVFMLATSITGKRVRGGIIEYWINDGVFGSFSCVIFGVSPPACVPLACTSN 340

Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
            +         Y + V G +C A D          ++I D + F  +  Y       F G
Sbjct: 341 RANPKCKGEPTYKSTVYGPTCDAVDKVFVDQELPELEINDWLVFPYMGAYTTANATIFQG 400

Query: 337 I 337
            
Sbjct: 401 F 401


>gi|207108770|ref|ZP_03242932.1| carboxynorspermidine decarboxylase (nspC) [Helicobacter pylori
           HPKX_438_CA4C1]
          Length = 193

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 69/193 (35%), Positives = 103/193 (53%), Gaps = 18/193 (9%)

Query: 190 ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNTTTLNTTV 248
              + W++ GGG H T  DY V    Q +K+F E+Y   ++ LEPGEAI      L  +V
Sbjct: 1   FRNMAWVNFGGGHHITRSDYNVNLLIQTIKDFKERYHNIEVILEPGEAIGWQCGFLIASV 60

Query: 249 LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP----------------NTGPYTAMV 292
           +DI +N + + ++D+S  AH+PD L      +I                  N G ++  +
Sbjct: 61  IDIVQNDQEIAVLDASFSAHMPDCLEMPYRPSILKVSAENDEELIEVEKGENQGAFSYFL 120

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352
            G +CLAGD  G F FE P+K GD+I F+D+  Y I + N FNG+ +P++A  +  G  K
Sbjct: 121 GGPTCLAGDFMGSFSFETPLKRGDKIVFQDMLHYTIVKNNSFNGVPLPSLAKLDQQG-FK 179

Query: 353 AIREFSYNDYYNN 365
            ++ FSY DY N 
Sbjct: 180 ILKNFSYEDYKNR 192


>gi|198432637|ref|XP_002122254.1| PREDICTED: similar to ornithine decarboxylase 1 [Ciona
           intestinalis]
          Length = 413

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 59/342 (17%), Positives = 117/342 (34%), Gaps = 24/342 (7%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D  ++         +     V+L  A+KC     +   L     G   +S  E+  
Sbjct: 50  FYIGDLNRVFLRHQQWKEVLPR--VELFYAIKCCPLMPVIRLLAALGTGFDCASQNEIES 107

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       Y +  K              +    ++    K +      ++ LR+ P
Sbjct: 108 VISIGVDPAKIIYALPCKPASQLQHARTRKVSLMTFDNEDELHKIQKYFPDARLVLRLLP 167

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             + + F +          G+K     +    NV GL F    + KS +     L+N  K
Sbjct: 168 DETGATFKMGSKFGCTLEEGKKLLVHAKKLDLNVIGLSFFVGDDCKSSIGMRLNLENSRK 227

Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQ------RLKEFSEKYSVQIYLEPGE 235
            F         ++ I +GGG    DKD  +             K F  +  V+I  EPG 
Sbjct: 228 MFDFASSIGINMDLIDIGGGFPGNDKDQKLFLQIANDTRDTLDKLFPSECGVRIIAEPGR 287

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGR 295
             V ++ ++ T+++   ++      +  + E               + +   +  ++ G 
Sbjct: 288 YFVESSFSIATSIVGKKQSEGIWCRIVFNAET------------KRFSDKAVHDTIIYGT 335

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
           +C   DI  +      + + D + ++D+  Y +  K  FNG+
Sbjct: 336 TCDGTDIIAQNVALPELDLEDWLIWDDMGAYTVLCKFGFNGV 377


>gi|167627105|ref|YP_001677605.1| pyridoxal-dependent decarboxylase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167597106|gb|ABZ87104.1| pyridoxal-dependent decarboxylase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 403

 Score =  130 bits (326), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 56/380 (14%), Positives = 109/380 (28%), Gaps = 33/380 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P++  D   L  +      +     VKL  ALK      +    ++       +S+ E+ 
Sbjct: 20  PFFYYDLDMLEKHAKELQKL----PVKLWYALKANPLSKIIKVFDEQNINFDVASIGELD 75

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKA--QKLHKKIG 119
               +    +   +    K                +  +++Q     D      ++ ++ 
Sbjct: 76  QVLSQGVDPKNILHTGPAKSYSQLEYFLAQGVRIFVIESINQFKDLSDLIEKNNINVEVL 135

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK--------IESEIKNVNGLMFHNNCENKS 171
           LR+    +  +  +       +  G    D           S   ++ G+          
Sbjct: 136 LRMQLVWNDQESNVLGGGGCVTPFGLSINDWKDFFDSAPDISNNMSIIGMHCFQWGNILC 195

Query: 172 FLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               S + K I K            ++ I LGGGI               L         
Sbjct: 196 LDKLSQIWKTITKALLDLSEAINVSLKIIDLGGGIGIPYNSSQKAVSINDLISCINNLKK 255

Query: 226 ---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-PDYLLYQESATI 281
               ++ +LE G   V  +    T V+DI       ++V      H+    L  +     
Sbjct: 256 EFPDIEYWLELGRYAVAESGVYITKVVDIKSVNNINLLVTDGGAQHLVRPALTGESFPIE 315

Query: 282 Y----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNG 336
                  +      + G  C + D  G     K + + D + F+    Y        F  
Sbjct: 316 LLREESCSETNDFQIHGPLCTSLDKAGIASLPKDIGLNDYLIFKQTGAYGFTESMPFFLC 375

Query: 337 INMPTIAVKNVDGTIKAIRE 356
            N+P   +    G ++ IR+
Sbjct: 376 HNLPAEIIFYK-GHLQTIRQ 394


>gi|198423004|ref|XP_002120700.1| PREDICTED: similar to ornithine decarboxylase 1 [Ciona
           intestinalis]
          Length = 437

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 58/349 (16%), Positives = 116/349 (33%), Gaps = 23/349 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D  +++ NL           ++   A+KC  +  +   L     G   +S +E+  
Sbjct: 49  FYIGDLGQIVRNLQLWTKHM--PQIRPYYAMKCNPSQPVVQLLASLGVGFDCASKFEIES 106

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
             +     +   + V  K              T+ F+   +L+K K      H    L +
Sbjct: 107 ALKCGVKPDDIIFAVPCKMSSHIEYACRSGVRTMTFDNADELHKIKRI----HSTGRLLM 162

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKI--ESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
              V+  +  +   ++  + + E  K  +  +    N+ G+ FH    + S       L+
Sbjct: 163 RLDVTEFERGIKFGDKFGASMPEARKLILLCKQLDLNLVGICFHPGSGSDSSEATRNCLQ 222

Query: 181 NIEKEFG---HFITQIEWISLGGGIHFTDKD--YPVKDFCQRLKEFSEKYSVQIYLEPGE 235
             +K +         ++ I +GGG    +              K F  +  V +  EPG 
Sbjct: 223 KCKKLYDFATSNEVHLKIIDIGGGFVCGENFIEISETVTATVDKLFPPQTGVTVIAEPGR 282

Query: 236 AIVTNTTTLNTTVLD---ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----Y 288
             V N     T+V     +++  K  +         +  +  ++               Y
Sbjct: 283 FFVKNAFAFVTSVHGKALVNDRAKYYIGAGVFSTFCMTLFEEFERIPESLSRKAENCEVY 342

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
            + V G +    DI          +IGD   F+++  Y+      FNG 
Sbjct: 343 ASNVYGPTGAGVDIVLNNIMLPEARIGDWWFFDNMGAYSSLVSIGFNGY 391


>gi|302842658|ref|XP_002952872.1| hypothetical protein VOLCADRAFT_63034 [Volvox carteri f.
           nagariensis]
 gi|300261912|gb|EFJ46122.1| hypothetical protein VOLCADRAFT_63034 [Volvox carteri f.
           nagariensis]
          Length = 380

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 53/356 (14%), Positives = 97/356 (27%), Gaps = 33/356 (9%)

Query: 26  KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV-MLGHEKFGGETHAYNVAYKDC 84
               V    A+KC+    +   L     G   +S  E+ M+           +    K  
Sbjct: 1   AMPRVLPYYAVKCYPEPAILKLLMALGAGFDCASKGELDMMLRMGASPARIIFAHPCKRS 60

Query: 85  EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLG 144
                            +     K        K+ LRI      ++  L           
Sbjct: 61  CDFRFAREHGIQYTTFDTVSELHKIAEMDPEFKLVLRIRADDPGARVPLGLKYGAEVSEA 120

Query: 145 EKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGG 201
                          G+ FH     K+   F+  ++N  K F        +++ + +GGG
Sbjct: 121 PALLRAARELALECCGVSFHVGSAAKNLATFTNAIENARKVFDEAASLGYRMDLLDIGGG 180

Query: 202 ---IHFTDKDYPVKDFCQRLKEFSEKYSVQ--------IYLEPGEAIVTNTTTLNTTVLD 250
                    +    +    +     KY           +  EPG      ++TL T V+ 
Sbjct: 181 FTGHFDEMGNVMFGEIANTINAALAKYFPPGGDLGDVRVIAEPGRYFAETSSTLLTPVIG 240

Query: 251 ----------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP------YTAMVCG 294
                     I ++      +  S    V D    +      P          Y + + G
Sbjct: 241 QRDRVAKDGSIHKDYWLTDGLYGSFNCIVYDGQNPEFRVIRSPIQPEPIDTRSYVSTLWG 300

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG--INMPTIAVKNVD 348
            +C + D+  +      ++ GD + + +   Y +     FNG     P       D
Sbjct: 301 PTCDSADVVYKDVALPALRNGDWLLWPNAGAYTVAGACDFNGIEFTHPCKVYVWSD 356


>gi|148261170|ref|YP_001235297.1| Orn/DAP/Arg decarboxylase 2 [Acidiphilium cryptum JF-5]
 gi|146402851|gb|ABQ31378.1| ornithine decarboxylase [Acidiphilium cryptum JF-5]
          Length = 376

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 56/368 (15%), Positives = 111/368 (30%), Gaps = 33/368 (8%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           M+ TP  L+D  ++    + A          +  A+K   A  + D L        ++S+
Sbjct: 13  MVSTPAILVDLDRVAA--NFAALRAALPDAAIYYAVKANPAAPVLDRLVGLGSRFDAASI 70

Query: 61  YEVM-LGHEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+             ++      +    +A     D   F++  +L+K  + A      
Sbjct: 71  EEIRACLAAGAAPAAISFGNTVKKRAAIAEAHARGVDLFAFDSDEELDKLAEAAPGAKVY 130

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN---VNGLMFHNNCENKSFLC 174
             L ++             +R F   G   +D +    +      G+ FH   +      
Sbjct: 131 CRLAVSQDG-----ADWPLSRKFGTSGTHARDLLVRAAERGLIPWGVSFHVGSQQTGVGA 185

Query: 175 FSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK------DFCQRLKEFSEKY 225
           +         +  +       +  ++LGGG     +D               +++     
Sbjct: 186 WRTAIGQAAAVFTDLRARGIDLRLLNLGGGFPTRYRDDIPPLGDFGAAIMDTVRQAFGNN 245

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENI----KNLVIVDSSVEAHVPDYLLYQESATI 281
              + +EPG AIV +     + V+          +  V +D      + +         I
Sbjct: 246 VPDLLIEPGRAIVGDAGVAVSEVVLACTRHEDEGRRWVYLDLGRFGGLAETEGEAIRYRI 305

Query: 282 YPN---TGPYTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKNW-F 334
                      A++ G SC   D+            +  GDR+   D   Y  +  +  F
Sbjct: 306 TAPGVAGADAPAVLAGPSCDGVDVMYRETPCPLPASLAAGDRVLIHDTGAYVTSYASQGF 365

Query: 335 NGINMPTI 342
           NG   P  
Sbjct: 366 NGFLPPEE 373


>gi|302384357|ref|YP_003820180.1| Orn/DAP/Arg decarboxylase 2 [Brevundimonas subvibrioides ATCC
           15264]
 gi|302194985|gb|ADL02557.1| Orn/DAP/Arg decarboxylase 2 [Brevundimonas subvibrioides ATCC
           15264]
          Length = 421

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 43/335 (12%), Positives = 90/335 (26%), Gaps = 17/335 (5%)

Query: 20  TALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAYN 78
            A + + N    +  A+K   +  + +TL +    G   +SL E+ L          A+ 
Sbjct: 31  AARWFQDNLKADVFYAVKANPSRWVIETLVEAGVTGFDVASLAEIELVRSVSTDVRLAFM 90

Query: 79  VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGLRINPSVSYSKFILADP 136
              K             +   ++   ++ +    A      + L +  +VS      +  
Sbjct: 91  HPVKSRSAITKAYFDHGVRTFSLDCEDELQKILDATGGANDLNLLVRMAVSADGAAYSLS 150

Query: 137 NRPFSRLGEKCKDKI---ESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQI 193
            +      +     +    +    + G+ FH   +      + A +  + +        +
Sbjct: 151 GKFGVSTDQAPSLLLATRRAVKDGLMGVCFHVGSQCMRPTAYQAAMAQVGRAITRAGVIV 210

Query: 194 EWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE 253
           + + +GGG           D  +        ++     E  E        L      I  
Sbjct: 211 DIVDIGGGFPSVYPGMVPPDMSEYADAIHRGFNEMPVSETTELWCEPGRALVAESSSILA 270

Query: 254 NIKNLVIVDSSVEA-----HVPDYLLYQESATIYPNTGP-----YTAMVCGRSCLAGDIF 303
            +         +                   T     G            G +C + D  
Sbjct: 271 RVDLRKGDALYLNDGSYGSLFDATHSRWPFPTKLVRDGDASSDLKPFQFYGPTCDSIDHM 330

Query: 304 -GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
            G F     ++ GD I    +  Y +     FNG 
Sbjct: 331 PGPFWLPADIREGDFIEIGMLGAYGVAMSTGFNGY 365


>gi|74316735|ref|YP_314475.1| diaminopimelate decarboxylase [Thiobacillus denitrificans ATCC
           25259]
 gi|74056230|gb|AAZ96670.1| diaminopimelate decarboxylase [Thiobacillus denitrificans ATCC
           25259]
          Length = 402

 Score =  129 bits (324), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 54/350 (15%), Positives = 100/350 (28%), Gaps = 36/350 (10%)

Query: 28  AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGGETHAYNVAY--KDCE 85
            G  L  A+K  +   +  TL  ++ G   SS  E+      F      ++      D  
Sbjct: 46  PGCDLFYAIKANSDLPILQTLAPHVAGFEVSSGGELAWVRAHFAEIPVIFSGPGKLDDEL 105

Query: 86  IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--KIGLRINPSVSYSKFILADPNRPFSRL 143
             A+    D +   +  +L +  + A +L +   + LR+N ++              +  
Sbjct: 106 RQALEHGVDCLHVESRHELQRLAEIAARLGRTAPVALRVNLTLDALAETPLMMGGKPTPF 165

Query: 144 GEKCKD-------KIESEIKNVNGLMFHNNCENK----SFLCFSAMLKNIEKEFGHFITQ 192
           G   +          E     + GL FH               +A L    +        
Sbjct: 166 GIPTEQLPACLDWLRERPEIRLRGLHFHLLSHQLDAAAHLRLVAAYLAQTRRWCEAHGLA 225

Query: 193 IEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEK---YSVQIYLEPGEAIVTNTTTLN 245
           ++ +++GGGI        + +    F   L     +     V++  E G  +        
Sbjct: 226 LDHVNVGGGIGINYREPARQFDWPAFSAGLASLLHEAGLPGVRVRFELGRYVTAACGYYA 285

Query: 246 TTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATI------------YPNTGPYTAMV 292
             V+DI  +     +V      H    Y                      P        V
Sbjct: 286 MQVVDIKHSHGKTFVVGRGGSHHFRTPYAQGHSHPFHVLPVDDWPYAFARPQAADQRVSV 345

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGINMPT 341
            G+ C   D+       + V+  D + F     Y  +  +  F     P 
Sbjct: 346 VGQLCTPKDLLAFDAPVESVRCNDVLVFPYAGAYAWHISHHDFLRHPHPA 395


>gi|121708875|ref|XP_001272275.1| ornithine decarboxylase, putative [Aspergillus clavatus NRRL 1]
 gi|119400423|gb|EAW10849.1| ornithine decarboxylase, putative [Aspergillus clavatus NRRL 1]
          Length = 402

 Score =  129 bits (323), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 44/348 (12%), Positives = 101/348 (29%), Gaps = 31/348 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+++ D  +++              V    A+KC     +   L     G   +S+ E+ 
Sbjct: 30  PFFVADLGQVIRQHRRWR--VNLPDVHPFFAVKCNPDPNLLKLLADLGTGFDCASIEELR 87

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                        +    K        +          +       +    + ++ LRI 
Sbjct: 88  TVLSLGVDPSRIIFANPCKSASSLVFAARTGVTRTTFDNLDELDSIRTFLPNAQLVLRIF 147

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
            S S +   L +              +       V G+ FH      +   +   +++ +
Sbjct: 148 ASDSDALINLGEKFGASVEASLPLLQRARELGLGVCGVSFHVGTGASNASAYVNAIQHAK 207

Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
             FG+       + ++ +GGG    + +         LKE      V++  EPG     +
Sbjct: 208 IVFGYGKSLGFDMNFLDIGGGFQDCNLEDIACSLRPMLKEEF-PSGVRLIAEPGRYYARS 266

Query: 241 TTTLNTTVLDISENIKNLVIVDSSV-----------------EAHVPD------YLLYQE 277
             TL   +L    ++         +                 +  V        +  +  
Sbjct: 267 AYTLACKILSRRRHLGTDDHDKPDMLYQNDGVYGSFMNVLIEKEIVRPSLVAYNWPSHSH 326

Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFE-KPVKIGDRISFEDVA 324
           S         +   + G +C + D   +       ++IGD + ++++ 
Sbjct: 327 SNDTRQKLEEHRYTIWGPTCDSVDCVAKDVPMSSEIRIGDWLKYKNMG 374


>gi|157953446|ref|YP_001498337.1| hypothetical protein AR158_C256R [Paramecium bursaria Chlorella
           virus AR158]
 gi|156068094|gb|ABU43801.1| hypothetical protein AR158_C256R [Paramecium bursaria Chlorella
           virus AR158]
          Length = 372

 Score =  129 bits (323), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 51/350 (14%), Positives = 108/350 (30%), Gaps = 22/350 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+   + +   +D    +     +    A+KC     +  T+         +S +E+  
Sbjct: 19  FYVSSPKIVEELVDQWNILFPR--IIPHYAVKCNNDDVLLKTMRDKNVNFDCASSHEIKK 76

Query: 66  G-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
             H         +    K  D  I A     D   F++  +L+K  +       ++ LRI
Sbjct: 77  VIHLGVDPSRIIFAHTMKSIDDLIFAKDQGVDIATFDSSFELDKINE--YHPTCRMILRI 134

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
                 +   L +             +  +     V G+ FH    +++   +   +K  
Sbjct: 135 RCDDPNATVQLGNKFGANDDEVLHLLEHAKKLNIEVVGISFHVGSGSRNPEAYYRAIKAS 194

Query: 183 EKEFGH---FITQIEWISLGGGIH-----FTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
              F            + +GGG+H          Y  ++    + +F  + ++ I  EPG
Sbjct: 195 RDAFDAAVSVGHTPYILDIGGGLHADIDDDEISTYMSENINDAINDFFPEETIMIIAEPG 254

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-------HVPDYLLYQESATIYPNTGP 287
                + + L T V+             +                 + Q    +      
Sbjct: 255 RFFAEHYSVLVTQVIGKRIRDGLYEYFFNESTYGGFSNVIFEKSIPIPQLVRYVSDEEEY 314

Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
             +++ G +C   D+  +      + +GD + F +   Y       FNG 
Sbjct: 315 VPSVLYGCTCDGIDVINQKVALPEMNVGDWVYFNNWGAYTNVLVTSFNGF 364


>gi|254483006|ref|ZP_05096241.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein
           [marine gamma proteobacterium HTCC2148]
 gi|214036691|gb|EEB77363.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein
           [marine gamma proteobacterium HTCC2148]
          Length = 399

 Score =  129 bits (323), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 56/356 (15%), Positives = 103/356 (28%), Gaps = 27/356 (7%)

Query: 3   KT-PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
            T P YL     L       L         +  A+K      + +TL          +SL
Sbjct: 33  PTDPLYLFCPDALQTRAKRFLTHFPGT---VSYAVKANPEVRVLETLAATGLQNFDVASL 89

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCE---IDAVLSNCDTIIFNTVSQLNKFKDKAQ-KLHK 116
            EV    E   G    YN   K  E      +     +   + +S+L K           
Sbjct: 90  DEVRRVSEYCPGSILHYNNPIKAEEAVAESYLRYGVRSFALDEMSELEKIHRCTGGDPDV 149

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
              +R     + + +              +    IE        L FH   +      + 
Sbjct: 150 TYTVRFKLEHAGAAYDFGSKFGATEDYAVELLQAIEKIGGRPA-LTFHPGSQCTDPQMYE 208

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL------KEFSEKYSVQIY 230
             L+   +       +  +I++GGG     +D  +    +         +      + + 
Sbjct: 209 RYLEAASRILSRAGVKPAFINVGGGFPEYYQDTSIPALEEYFSVISSSMDKYFDTDIPLI 268

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIK--------NLVIVDSSVEAHVPDYLLYQESATIY 282
            EPG  +V ++ +L   V+ + +  K           + + S+         ++E   + 
Sbjct: 269 CEPGRGMVASSVSLLARVIHVRDCGKSVFVNDGVYGGMQEQSLVDICLPVRAWREGEALI 328

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGI 337
                    V G +C   D   +       ++ GD I F  +  Y       FNG 
Sbjct: 329 ATESD--YHVFGPTCDPVDRLSKSTALPKELRTGDYIEFGLLGAYGSATTTTFNGF 382


>gi|129277532|ref|NP_001076080.1| antizyme inhibitor 1 [Bos taurus]
 gi|126717437|gb|AAI33310.1| AZIN1 protein [Bos taurus]
 gi|296480504|gb|DAA22619.1| ornithine decarboxylase antizyme inhibitor [Bos taurus]
          Length = 448

 Score =  129 bits (323), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 58/371 (15%), Positives = 109/371 (29%), Gaps = 31/371 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  K++        I     +K    +KC +   + + L     G   SS  E+ L
Sbjct: 40  FFVGDLGKIVKKHSQWQNIVAQ--IKPFYTVKCNSTPAVLEILAALGTGFACSSKTEMAL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             E     E   Y    K        +     I    +++   K      + K+ L I  
Sbjct: 98  VQELGVSPENIIYISPCKQVSQIKYAAKVGVNIMTCDNEVELKKIARNHPNAKVLLHIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S              +      +  +     + G+ FH +   K    +   L +   
Sbjct: 158 EDSIGGGEGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARC 217

Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238
            F   G F   +  + +GGG      +   V      L    F E   ++I  EPG   V
Sbjct: 218 VFDMAGEFGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDVYFPEGSGIKIISEPGSYFV 277

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE--------------------- 277
           ++  TL   ++       +                +Y                       
Sbjct: 278 SSAFTLAVNIVAKKVVENDKFSSGVGKTGSDEPAFMYYMNDGVYGSFASKLSEDLNTIPE 337

Query: 278 -SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                  +   +T+ + G SC   D   E      + +GD + F+++   +++  + FN 
Sbjct: 338 VHKKYKADEPLFTSSLWGPSCDELDQIVENCLLPELNVGDWLIFDNMGADSVHEPSAFND 397

Query: 337 INMPTIAVKNV 347
              P I     
Sbjct: 398 FQRPAIYYMMS 408


>gi|330991208|ref|ZP_08315160.1| Lysine/ornithine decarboxylase [Gluconacetobacter sp. SXCC-1]
 gi|329761701|gb|EGG78193.1| Lysine/ornithine decarboxylase [Gluconacetobacter sp. SXCC-1]
          Length = 379

 Score =  129 bits (323), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 51/360 (14%), Positives = 102/360 (28%), Gaps = 31/360 (8%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP  ++D  ++                ++  A+K   A  +   L        ++S  E+
Sbjct: 19  TPCLVVDVDRVEERYRALREALPL--ARIYYAVKANPANAILRRLVGLGSAFDAASWEEI 76

Query: 64  MLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            +  E        ++            A  +  D   F+   +L+K    A        L
Sbjct: 77  SMCLEAGARPADISFGNTVKKAGNIARAYQAGVDMFAFDCAEELDKLARHAPGSRVYCRL 136

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
            +    +             +      +        +  GL FH   +      + A + 
Sbjct: 137 IVENEGADWPLSRKFGTTLDNARDLMLR--ARDLGLDPYGLSFHVGSQQTETGAYEAAIA 194

Query: 181 NIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDF------CQRLKEFSEKYSVQIYL 231
            +   F         +  ++LGGG     +D               + E       ++ +
Sbjct: 195 RVGMLFTDLKAAGLDLRMVNLGGGFPIRYRDDVPGIDRFAVAISHAMTEHFGNDLPEMII 254

Query: 232 EPGEAIVTNTTTLNTTVL---------DISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
           EPG  +V +   +++ V+          +     ++       E           +    
Sbjct: 255 EPGRFMVGDAGVVSSEVVLVSRRGMNDGVRWVYLDIGRFGGLAETEGEAIRYGIRTPHDG 314

Query: 283 PNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINR-KNWFNGIN 338
             TGP    + G +C   DI  E   +     ++ GDRI       Y        FNG+ 
Sbjct: 315 METGP--VAIAGPTCDGADIMYEKTPYALPLALESGDRIELLSTGAYVSTYCSTGFNGLK 372


>gi|296227426|ref|XP_002759367.1| PREDICTED: antizyme inhibitor 1 isoform 1 [Callithrix jacchus]
 gi|296227428|ref|XP_002759368.1| PREDICTED: antizyme inhibitor 1 isoform 2 [Callithrix jacchus]
 gi|296227430|ref|XP_002759369.1| PREDICTED: antizyme inhibitor 1 isoform 3 [Callithrix jacchus]
          Length = 448

 Score =  129 bits (323), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 57/371 (15%), Positives = 109/371 (29%), Gaps = 31/371 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  K++        +     +K    +KC +A  + + L     G   SS  E+ L
Sbjct: 40  FFVGDLGKIVKKHSQWQNVVAQ--IKPFYTVKCNSAPAVLEILAALGTGFACSSKNEMAL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             E     E   Y    K        +     I    +++   K      + K+ L I  
Sbjct: 98  VQELGVSPENIIYISPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             +              +      +  +     + G+ FH +   K    +   L +   
Sbjct: 158 EDNIGGEEGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARC 217

Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238
            F   G     +  + +GGG      +   V      L    F E   V+I  EPG   V
Sbjct: 218 VFDMAGEIGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDIYFPEGSGVKIISEPGSYYV 277

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY------------------QESAT 280
           ++  TL   ++       +                +Y                       
Sbjct: 278 SSAFTLAVNIIAKKVVENDKFSSGVEKTGSDEPAFMYYVNDGVYGSFASKLSEDLNAIPE 337

Query: 281 IYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
           ++         +T+ + G SC   D   E      + +GD + F+++   + +  + FN 
Sbjct: 338 VHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSFHEPSAFND 397

Query: 337 INMPTIAVKNV 347
              P I     
Sbjct: 398 FQRPAIYYMMS 408


>gi|109087149|ref|XP_001082807.1| PREDICTED: antizyme inhibitor 1 isoform 3 [Macaca mulatta]
 gi|109087153|ref|XP_001083647.1| PREDICTED: antizyme inhibitor 1 isoform 7 [Macaca mulatta]
 gi|297299897|ref|XP_002805501.1| PREDICTED: antizyme inhibitor 1 [Macaca mulatta]
          Length = 448

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 57/371 (15%), Positives = 109/371 (29%), Gaps = 31/371 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  K++        +     +K    +KC +A  + + L     G   SS  E+ L
Sbjct: 40  FFVGDLGKIVKKHSQWQNVVAQ--IKPFYTVKCNSAPAVLEILAALGTGFACSSKNEMAL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             E     E   Y    K        +     I    +++   K      + K+ L I  
Sbjct: 98  VQELGVSPENIIYISPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             +              +  +   +  +     + G+ FH +   K    +   L +   
Sbjct: 158 EDNIGGEEGNMKFGTTLKNCKHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARC 217

Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238
            F   G     +  + +GGG      +   V      L    F E   V+I  EPG   V
Sbjct: 218 VFDMAGEIGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDIYFPEGSGVKIISEPGSYYV 277

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE--------------------- 277
           ++  TL   ++       +                +Y                       
Sbjct: 278 SSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVYGSFASKLSEDLNTIPE 337

Query: 278 -SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                  +   +T+ + G SC   D   E      + +GD + F+++   + +  + FN 
Sbjct: 338 VHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSFHEPSAFND 397

Query: 337 INMPTIAVKNV 347
              P I     
Sbjct: 398 FQRPAIYYMMS 408


>gi|258543568|ref|YP_003189001.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO
           3283-01]
 gi|256634646|dbj|BAI00622.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO
           3283-01]
 gi|256637702|dbj|BAI03671.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO
           3283-03]
 gi|256640756|dbj|BAI06718.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO
           3283-07]
 gi|256643811|dbj|BAI09766.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO
           3283-22]
 gi|256646866|dbj|BAI12814.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO
           3283-26]
 gi|256649919|dbj|BAI15860.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO
           3283-32]
 gi|256652909|dbj|BAI18843.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256655963|dbj|BAI21890.1| diaminopimelate decarboxylase [Acetobacter pasteurianus IFO
           3283-12]
          Length = 437

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 48/357 (13%), Positives = 103/357 (28%), Gaps = 27/357 (7%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP  ++D   + +              ++  A+K   A  +   L +      ++S  EV
Sbjct: 77  TPCLVLDVDAVADRYHALGKAL--PQARIYYAVKANPAQPILRRLVELGSCFDAASWEEV 134

Query: 64  MLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            L        +  ++            A  +     +F+   +L K    A        L
Sbjct: 135 SLCLQAGASPDAISFGNTVKKVSAIRAAYEAGVRMFVFDCREELEKLAAHAPGSRVYCRL 194

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
            +      +++ L+          ++          +  GL FH   +  S   +   + 
Sbjct: 195 LV--DNYGAEWPLSRKFGTTVESAKELMLAARELGLDPYGLSFHVGSQQLSAEAYEVAIA 252

Query: 181 NIEKEF---GHFITQIEWISLGGGIHFTD----KDYPVKDFC--QRLKEFSEKYSVQIYL 231
                F         +  ++LGGG          +         + + E       ++ +
Sbjct: 253 RAAALFTDLSAAGLDLRMVNLGGGFPIRYRDDVPEIDHFTTAIFRAMTEHFGNALPEMLV 312

Query: 232 EPGEAIVTNTTTLNTTVLDI----SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287
           EPG  IV     + + V+ +     ++    V +D      + +         I  +   
Sbjct: 313 EPGRFIVGEAGVVRSEVVLVSARGRKDGLRWVYLDIGRFGGLAETENESIRYAIRTSRDG 372

Query: 288 YT---AMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINR-KNWFNGI 337
                  + G +C   DI  E   +     +  G+++       Y        FNG 
Sbjct: 373 SPTGRVALAGPTCDGADIMYEKTHYELPLDLTAGEQVDLLGAGAYVSTYCATGFNGF 429


>gi|254384891|ref|ZP_05000227.1| lysine/ornithine decarboxylase [Streptomyces sp. Mg1]
 gi|194343772|gb|EDX24738.1| lysine/ornithine decarboxylase [Streptomyces sp. Mg1]
          Length = 458

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 50/358 (13%), Positives = 94/358 (26%), Gaps = 42/358 (11%)

Query: 26  KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAY-NVAYKD 83
               V    A+K      +   L +   G   +S  E+ L        E     + A   
Sbjct: 66  PGTPVLHAFAVKAAPLVPVLRLLAEAGLGCEVASPGELALARAAGVAPERMVLDSPAKTS 125

Query: 84  CEIDAVLSNCDTIIFNTVSQLNKFKDKAQ--KLHKKIGLRINPSVSYSKFILADPNRPFS 141
            E+   L+    +  +   +L +    A        IG+R+NP                S
Sbjct: 126 RELREALALGIAVNADNRQELERIDALAGAGPPASPIGIRVNPQTGAGTIDALSTATATS 185

Query: 142 RLGEKCKD--------KIESEIKNVNGLMFHNNCE----NKSFLCFSAMLKNIEKEFGHF 189
           + G   +D        +  +E   +  L  H+  +             +    E+     
Sbjct: 186 KFGVPLRDGGARAWLVRACAERPWITRLHTHSGSQGVPLALIAEGVRELHALAEEINAAA 245

Query: 190 IT-QIEWISLGGGIHFT---------DKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
              QI+ + +GGG+               Y  +             S  +  E G +++ 
Sbjct: 246 GRRQIDTLDIGGGLPVNFASDERTPGYAQYVAELRAAA--PALFDGSYGLVTEFGRSLLA 303

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAH--------------VPDYLLYQESATIYPNT 285
               +   V          + +  +                  +  Y          P  
Sbjct: 304 KHGLVLARVEYTKSTGGRPIALTHAGVQLATRTVYAPAAWPLRILPYDAGGAPKPGAPAV 363

Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343
                 + G +C AGD+         +  GD I   D   Y       +N +  P + 
Sbjct: 364 PVVAQDIAGPACFAGDLLATARELPQLSPGDLIGVPDTGAYFFTAHYGYNSLPRPAVY 421


>gi|269216241|ref|ZP_06160095.1| putative Orn/DAP/Arg decarboxylase 2 [Slackia exigua ATCC 700122]
 gi|269130500|gb|EEZ61578.1| putative Orn/DAP/Arg decarboxylase 2 [Slackia exigua ATCC 700122]
          Length = 396

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 56/382 (14%), Positives = 106/382 (27%), Gaps = 38/382 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   L   +     I     V L  A+K    +          D     S  E
Sbjct: 15  GTPAFVFDAGALERRIAACRDIVGET-VGLCYAMKANPFF--VRPAAHAADRLEVCSPGE 71

Query: 63  VMLG-HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + +            Y+      +   DA+   C  +   ++  +      A +    + 
Sbjct: 72  LDICKRAAIDPAKIVYSGVNKLPEDIGDAIDYGCGVLTAESLLHVRYINQVALEKGLVVD 131

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           + +  +                 L     D        V G+ +    + K        L
Sbjct: 132 VLLRLNAGSQ------FGMSKEDLVSVVDDLGAWPGIRVVGIHYFVGTQRKKLTHQIKEL 185

Query: 180 KNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVK--------DFCQRLKEFSEKYSV 227
           + IE             +E +  G G+                  +    LK  + K   
Sbjct: 186 EKIEAFIDELASEHDFVVERLEYGPGLAVPYFMDDDFSDDLAPLKEMADVLKRVATK--A 243

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287
           ++ +E G           T  +D+  N      +      H+  +               
Sbjct: 244 ELTIEMGRFFAAPCGAYVTRAMDMKSNKGTNYCILDGGMNHLTYFGQMMGMHVPQIANLS 303

Query: 288 Y-----------TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FN 335
           +              +CG  C   DI       +  + GD ++F +V  Y++      F 
Sbjct: 304 HLDRTVDAGNVAEWCLCGSLCTINDILTRAVELEDFRPGDVLAFFNVGAYSVTEGIHLFL 363

Query: 336 GINMPTIAVKNVDGTIKAIREF 357
              MP I V+  DG++  +R+F
Sbjct: 364 SRTMPRIVVRYDDGSVALVRDF 385


>gi|123493664|ref|XP_001326341.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain
           containing protein [Trichomonas vaginalis G3]
 gi|121909254|gb|EAY14118.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain
           containing protein [Trichomonas vaginalis G3]
          Length = 397

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 52/368 (14%), Positives = 117/368 (31%), Gaps = 27/368 (7%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++  +L           + +  A+KC     +   L         +S  E+  
Sbjct: 33  FWIADFNRIRRSLALWEENLSR--LHIHYAMKCCDEPELLKFLADRGVAYDCASEDEIRR 90

Query: 66  GHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                       +    K  +    A  +    ++++T S+L K          ++ LRI
Sbjct: 91  ILALGVDANRIVFAHPIKSIDSIKYAKENGVTRLVYDTESELRKI--LRYYPEAEVFLRI 148

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC---ENKSFLCFSAML 179
            P  +++K  L++      +   K          N  G  FH      +  +F      +
Sbjct: 149 KPRFTHAKIQLSNKFGADPKEVPKLMQLASELGANFIGFSFHVGSLCDDITTFRVALEYV 208

Query: 180 KNIEKEFGHFITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSV----QIYLEP 233
             ++ +       + +I +GGG         Y   +  + +    ++       +   EP
Sbjct: 209 AELKAKAEQLGLNVSFIDIGGGFLPPSIKAKYTFAEIAEAINTAIDELFDGDEIEFLAEP 268

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVI---------VDSSVEAHVPDYLLYQESATIYPN 284
           G  I ++   L   V+ + E+               +  +  A   D+            
Sbjct: 269 GRFIASDFMDLVMPVICVKEHHDPDGDEQAVFIAEGIYGAFNALNYDHAEPHFLIRTEGA 328

Query: 285 TGPY--TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
           +        + G++C + D+  E      +++GD +  E    Y     ++FNG     +
Sbjct: 329 SEGEMIKTRLWGQTCDSEDLVYEELSWPRLEVGDYLMIEKFGAYTYAPTSFFNGFMHHKV 388

Query: 343 AVKNVDGT 350
              N +  
Sbjct: 389 FHINEEDE 396


>gi|323342515|ref|ZP_08082747.1| putative diaminopimelate decarboxylase [Erysipelothrix
           rhusiopathiae ATCC 19414]
 gi|322463627|gb|EFY08821.1| putative diaminopimelate decarboxylase [Erysipelothrix
           rhusiopathiae ATCC 19414]
          Length = 402

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 80/386 (20%), Positives = 152/386 (39%), Gaps = 24/386 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           I+TPY+LIDK++L  N++T     +          ++K  +   + + ++         S
Sbjct: 3   IQTPYFLIDKEELEKNVNTFSNALQKYWPNSIFSYSVKTNSLPWVLEFMHSKKIRAEVVS 62

Query: 60  LYEVMLG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             E  L     F  +   YN     + ++++ L     I  ++  +L    +    +   
Sbjct: 63  DEEYQLSKLCGFSDDQIVYNGPIKGNDQLESALKGKAIINIDSEHELMYILENYHLVSDN 122

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCK----DKIESEIKNVN----GLMFHNNCEN 169
           IG+R+N      K           R G   +    +K+ +++K V     GL FH N  +
Sbjct: 123 IGVRVNVPTHIFKKEDIGYEEDGFRFGFSDETGRLEKVITDLKKVGISKFGLHFHVNSVS 182

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEFSEK 224
           +S   +S++ K  +     +     +I +GGG        P     +    + L++  + 
Sbjct: 183 RSNDVYSSISKYAKNIINKYQLDPSYIDIGGGFFGGLPTKPSAESYIATIREELEDVVDI 242

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
            + ++ +EPG AI+ +   L ++VLD+ E     ++   +   H+      Q        
Sbjct: 243 NTTKLIIEPGSAIIGSCVELYSSVLDLKETQNVEIVTTDASRLHIDPLWKKQNYFYRIKK 302

Query: 285 TGPYTAM------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            G  +        +CG +C+  D   +   E  V  GD+I FE V  Y+I     F    
Sbjct: 303 MGNESLNSGKDKLICGYTCMDHDRIMKLDKEVSVAAGDQIIFEKVGAYSITLGGPFIRY- 361

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364
            P + VK  +  +    E +  DYY+
Sbjct: 362 YPKVLVKEENDYLIVRDEMNVGDYYS 387


>gi|219520919|gb|AAI72060.1| Gm853 protein [Mus musculus]
          Length = 413

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 48/344 (13%), Positives = 91/344 (26%), Gaps = 34/344 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           + + D   L++   T L       V+   A+KC +   +   L     G   +S  E+  
Sbjct: 52  FMVADLDVLVSRHRTFLQALPR--VQPFYAVKCNSNPWVLLVLAALGTGFDCASQGELEQ 109

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       +    K        + C   +    ++    K        ++ LRI  
Sbjct: 110 VLGLGVAPSRIIFANPCKAVSHIQFAARCGVQLLTFDNEEELIKLARYHPRARLVLRIQT 169

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S S F L                        V G  FH   +  +   +   + +  +
Sbjct: 170 LDSQSTFPLHTKFGAHLEACGHLLQVARELGLAVVGASFHVGSDCHTPESYRQAIADCHR 229

Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRL------KEFSEKYSVQIYLEPGE 235
            F         +  + LGGG           +   R+      + F E+  +++  EPG 
Sbjct: 230 VFEMGCKAGHHMSLLDLGGGFPGVKGSEAKFEEVARVINTALAQYFPEETGIEVIAEPGR 289

Query: 236 AIVTNTTTLNTTVL----------DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285
               +  T    ++                             + D +           +
Sbjct: 290 FYAGSVCTAAVNIIVKKSSLDPGGHRKLAYYLNEGHYGVFRLFLRDPVPRIPIVVKEFPS 349

Query: 286 GP--YTAMVCGRSCLAGD-IFGEFHFEKPVKIGDRISFEDVAGY 326
            P  +   + G +C A D +F        +         DV  Y
Sbjct: 350 EPPLFPCTLYGPTCDAYDRLFSTEVQLPEL---------DVGAY 384


>gi|324999534|ref|ZP_08120646.1| Orn/DAP/Arg decarboxylase 2 [Pseudonocardia sp. P1]
          Length = 422

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 51/366 (13%), Positives = 99/366 (27%), Gaps = 29/366 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP+  +D Q +                ++L A+K      +   L     G   +S  E
Sbjct: 58  PTPFLALDPQVVRERHAALAAAFG--DARILYAVKACPEPAVLRVLADAGAGFDVASQNE 115

Query: 63  VMLGHEKFGGE---THAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + L            H   V        A        + ++   ++    +      ++ 
Sbjct: 116 IALCLAAGADPASLQHGNPVRGPGAAARAAADGVRRFVTDSAEDVDALAAEVPGARVQVR 175

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           L ++ + S + F       P   +    +           G+ FH   +      ++  +
Sbjct: 176 LSVDDAGSATPFHGKFGALPGEAVALLRRAARLGLEPA--GVTFHAGSQQTRPATYAEAV 233

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDY---------PVKDFCQRLKEFSEKYSVQIY 230
               +  G    +   + LGGG   T +            V+                + 
Sbjct: 234 AVALRTAGRAGLRRPELDLGGGWPVTYRADVPGPGEFAAAVRAAVAGAVAAGHVDGADLL 293

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------DYLLYQESATIY 282
           LEPG AI      L  TVL +S            ++            + + Y       
Sbjct: 294 LEPGRAIAGPAGVLRATVLRVSRRPGIDHRRWVYLDVGRYQGLAETEGEAIGYPLRVPGR 353

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEF---HFEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338
                   ++ G +C   D+            +  GD +       Y  +  +  FNG  
Sbjct: 354 SGP-DGPCVLAGPTCDGDDVIYRRTPVALPGDLAAGDVVDLLHAGAYTSSYASVGFNGFG 412

Query: 339 MPTIAV 344
              + V
Sbjct: 413 PLDVVV 418


>gi|257487731|ref|ZP_05641772.1| ornithine decarboxylase, putative [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|330985385|gb|EGH83488.1| ornithine decarboxylase [Pseudomonas syringae pv. lachrymans str.
           M301315]
 gi|331008471|gb|EGH88527.1| ornithine decarboxylase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 371

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 51/352 (14%), Positives = 108/352 (30%), Gaps = 26/352 (7%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVM 64
           +Y +D + +  N              +L A+K      + + L+Q        +SL EV 
Sbjct: 16  FYTVDPRWITRNAQQFSGCFPGT---VLYAMKANPLEQVLEALSQGGINHFDVASLAEVQ 72

Query: 65  LGHEKFGGETHAYNVAYKDCEI---DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
             H              K               + + ++  +L+K +D   +    I L 
Sbjct: 73  TVHNTLPNAVQYLMNPVKSRHCLHEAYYRYGVRSFVLDSEEELSKLRDVLPERDSTISLF 132

Query: 122 INPSVSYSKFIL--ADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +  + S S  +            L  +   ++ S  +   GL FH   +      + A L
Sbjct: 133 VRYAPSESTAVYDLRGKFGASPVLATQLVHQVASSTEWSLGLSFHVGSQALEDGPWLAAL 192

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF------CQRLKEFSEKYSVQIYLEP 233
            + +         +  + +GGG      +            C+ ++       + +  E 
Sbjct: 193 NDADAIVRDTAEHVRHLDIGGGFPGNYLNSMGNTPDLVGRVCEHIQTSPTLKDLNLICEA 252

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG------- 286
           G  +V    +L   VL   E         + +   +     + +        G       
Sbjct: 253 GRGLVYGGMSLFARVLSRREQSVFC---GAGIFGGLLSAQQWLQFPARVWREGTPYTGAA 309

Query: 287 PYTAMVCGRSCLAGDIFG-EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
             T  + G +C + D     +     ++  D + F+    Y+++ +  FNG 
Sbjct: 310 ENTFNIFGPTCDSMDRLAFPYSLASDIRESDWLEFQSTGAYSVSLRTPFNGF 361


>gi|307179325|gb|EFN67689.1| Ornithine decarboxylase 1 [Camponotus floridanus]
          Length = 409

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 48/353 (13%), Positives = 112/353 (31%), Gaps = 24/353 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +L      +   K   V    A+KC     +   L         +S  E+  
Sbjct: 36  FYITDIGNVLRKHQEWIT--KMPKVIPYFAIKCNPDPTVIKVLAALNVSFDCASKQEIEQ 93

Query: 66  G-HEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                  G+   +     Y      A     + +  +  ++L K KD   +    I +R 
Sbjct: 94  VMRYGVHGDRIIFAHPTKYPSHIKYAKKVGVEIMTVDNENELFKIKDLFSEAKIVIRIRC 153

Query: 123 NPSVSYSKFILA--DPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +   + +  ++         +          +    N+ G  FH     +    +   ++
Sbjct: 154 DAKNNSNTSVILGLKFGSEPNEETINLIKLAKHLRLNLYGFSFHVGSPCREMKAYKRGIE 213

Query: 181 NIEKEFG---HFITQ-IEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV--QIYLEPG 234
             ++            ++ I +GGG    +       F   + +  +      ++  EPG
Sbjct: 214 LCKQLINISKAIGHDNVQLIDIGGGFP-GENGTNADMFANIINDAIQDLDPSIRVISEPG 272

Query: 235 EAIVTNTTTLNTTVLDISE------NIKNLVIVDSSVEAHVPDYLLYQESATIYPNT--- 285
              V ++ TL   +            ++   +      + + + L  Q    +  +    
Sbjct: 273 SYYVASSFTLAAYIHSKRITPKNGKMMRMYYMNCGVFNSFIDELLGLQSRTPVLLSEPIS 332

Query: 286 -GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
              + + + G +  + D+  +      V+IGD + ++D+  Y+      FNG 
Sbjct: 333 NEKFLSSIWGPTADSCDVIVKEMMLPEVQIGDWLIWKDMGAYSTALATTFNGF 385


>gi|58580977|ref|YP_199993.1| diaminopimelate decarboxylase [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|58425571|gb|AAW74608.1| diaminopimelate decarboxylase [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 426

 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 48/354 (13%), Positives = 100/354 (28%), Gaps = 29/354 (8%)

Query: 21  ALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGGETHAY-NV 79
            +  +  A  +L  A K  A   +  TL  ++DG  ++S  E+   H +       +   
Sbjct: 69  WMRAQLPAQCELFYAAKANAEPPILQTLAAHVDGFEAASGGELAWLHAQQPQAPLLFGGP 128

Query: 80  AYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNR 138
              D E+    +  D  +   ++S+L +    A    + + + +  +++           
Sbjct: 129 GKLDTELAQAAALPDCTVHVESLSELERLAAIAAHAGRCVPVFLRMNIAVPGAQSTRLTM 188

Query: 139 PFS--RLGEKCKDKIESEI-------KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHF 189
                  G    D   +           + G  FH     +       ++    +    +
Sbjct: 189 GGHPSPFGLDPDDLDAAMQLLQASPSLRLEGFHFHLMSHQRDAAAQLHLIAAYLRTVQRW 248

Query: 190 ITQ----IEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSV--QIYLEPGEAIVT 239
                     ++ GGG           +    FC  L     ++    ++ LEPG  +  
Sbjct: 249 RHTYALGPLRVNAGGGFGVDYLAPESSFDWAGFCAGLPALLGEHGTDLRLRLEPGRYVSA 308

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT-------AMV 292
           +       VLD+  +      +      H                 G  T         +
Sbjct: 309 SCGWYLMEVLDLKRSHGAWFAIARGGTHHFRTPAAQAHDHPFRVLRGARTPVLRDTPVTL 368

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIAVK 345
            G+ C   D+         +  GD ++F     Y     +  F     P +   
Sbjct: 369 VGQLCTPKDVLARDQSVAALAPGDCLAFPLAGAYAWTISHQHFLMHPAPQMVFL 422


>gi|228936396|ref|ZP_04099194.1| Decarboxylase [Bacillus thuringiensis serovar andalousiensis BGSC
           4AW1]
 gi|228823228|gb|EEM69062.1| Decarboxylase [Bacillus thuringiensis serovar andalousiensis BGSC
           4AW1]
          Length = 411

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 55/385 (14%), Positives = 108/385 (28%), Gaps = 40/385 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+ +  ++ N  +  +    +    L  +LK      +   L         SS+ E
Sbjct: 12  GSPLYIYNLDEVSNAYEKLVASLPD-DSILYYSLKANPNPEVTKHLVNLGCYAEVSSIGE 70

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +    +     +   Y    K  +    A+  N +     +V +L    + A +L K + 
Sbjct: 71  LNTALDVGTHPDNCIYTGPGKTRKEIKYALSKNINHFSVESVEELIIIDELASELSKAVN 130

Query: 120 LRINPSVSY--------SKFILADPNRPFSRLGEKCKDKIESEIK-NVNGLMFHNNCENK 170
           + +  + ++           I +        +       I       +NG   +N     
Sbjct: 131 ITLRINPAFTVGKASIKMTGIPSQFGFDEESIDANVIQLITKNQNLKINGFHIYNGSNFH 190

Query: 171 SFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK-- 224
           S         N              + E+I  GGG              ++LKE   K  
Sbjct: 191 SVEMIEENFMNTLNTVINLQEKLSLEPEFIDFGGGFAAPFGKNESLPSYEKLKERLTKLL 250

Query: 225 -------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
                   S +I  E G  +     TL  TV  +  +      +      H+      + 
Sbjct: 251 RDKFKGTKSPKIAFESGRYLTATCGTLVGTVQSVKMSKGKKYCIVDFGINHIGGMSGLRR 310

Query: 278 SATIYPNTGPYT-----------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
             T+       T             + G  C   D   +      ++ GD +   +V  Y
Sbjct: 311 IPTVELQLFKLTSSENDTLIMDNVNIVGPLCTPLDYLAKNVSLGAIEPGDIVFISNVGAY 370

Query: 327 NINRKN--WFNGINMPTIAVKNVDG 349
            +   +   F    +P   +     
Sbjct: 371 GLT-GSLLGFLSREIPNELIIKNQE 394


>gi|188578044|ref|YP_001914973.1| diaminopimelate decarboxylase [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|188522496|gb|ACD60441.1| diaminopimelate decarboxylase [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 398

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 50/355 (14%), Positives = 100/355 (28%), Gaps = 31/355 (8%)

Query: 21  ALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGGETHAY-NV 79
            +  +  A  +L  A K  A   +  TL  ++DG  ++S  E+   H +       +   
Sbjct: 41  WMRAQLPAQCELFYAAKANAEPPILQTLAAHVDGFEAASGGELAWLHAQQPQAPLLFGGP 100

Query: 80  AYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRINPS---VSYSKFILAD 135
              D E+    +  D  +   ++S+L +    A    + + + +  +          L  
Sbjct: 101 GKLDTELAQAAALPDCTVHVESLSELERLAAIAAHAGRCVPVFLRMNIAVPGAQSTRLMM 160

Query: 136 PNRPFSRLGEKCKDKIESEI-------KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH 188
              P    G    D   +           + G  FH     +       ++    +    
Sbjct: 161 GGHPSP-FGLDPDDLDAAMQLLRASPSLRLEGFHFHLMSHQRDAAAQLQLIAAYLRTVQR 219

Query: 189 FITQ----IEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSV--QIYLEPGEAIV 238
           +          ++ GGG           +    FC  L     ++    ++ LEPG  + 
Sbjct: 220 WRHTYALGPLRVNAGGGFGVDYLAPESSFDWAGFCAGLPALLGEHGTDLRLRLEPGRYVS 279

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT-------AM 291
            +       VLD+  +      +      H                 G  T         
Sbjct: 280 ASCGWYLMEVLDLKRSHGAWFAIARGGTHHFRTPAAQAHDHPFRVLRGARTPVLRDTPVT 339

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIAVK 345
           + G+ C   D+         +  GD ++F     Y     +  F     P +   
Sbjct: 340 LVGQLCTPKDVLARDQSVAALAPGDCLAFPLAGAYAWTISHQHFLMHPAPQMVFL 394


>gi|307329724|ref|ZP_07608881.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces violaceusniger Tu 4113]
 gi|306884664|gb|EFN15693.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces violaceusniger Tu 4113]
          Length = 424

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 53/400 (13%), Positives = 99/400 (24%), Gaps = 65/400 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y+ D   L  +           G++L  A K   A  +   L  ++ G   +S  EV 
Sbjct: 19  PAYVYDLTALRAHARAVRDALP-PGLELYYAAKANPAPAVLQALASHITGYEVASGGEVE 77

Query: 65  LGHEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI---- 118
                  G   A+    K       A+    +     +  +L      A+          
Sbjct: 78  HVRAAVPGAPLAFGGPGKTEGELRRALTLGVERFHVESEQELRLLAGAAEDAGIPDVDVL 137

Query: 119 ----GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174
                      +  +   +     PF    E  +  +    +   G            L 
Sbjct: 138 LRVNLPVAGDELGGAALAMGGRPSPFGLDPEAVERCLPLFAEASPGGGPLRLSGGGGPLR 197

Query: 175 FSAMLKNIEKEF--------------------GHFITQIEWISLGGGIHFTDKDYPVKDF 214
              +  ++                              +  +++GGG+         +  
Sbjct: 198 LRGIHAHLASGLDAPAQVAVAAAIADWAAKLSERHGLGLTEVNVGGGMGVDYAHPDRRFD 257

Query: 215 CQRLKEFSEKYSVQ-----IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV 269
                +     +++     + +EPG A+        T VLDI  +      V      H+
Sbjct: 258 WAAYGQGMADLALRHPGLTLRIEPGRALTVYCGWYVTEVLDIKHSGGEAFAVVRGGTHHL 317

Query: 270 PDYLLYQE----------------------------SATIYPNTGPYTAMVCGRSCLAGD 301
                 Q                                  P        + G+ C   D
Sbjct: 318 RTPATKQHDQPFQVLPMDAGDAGDAGDTGDTGDTWTRPWARPAVRAEPVTLVGQLCTPKD 377

Query: 302 IFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGINMP 340
           +         V++GDR++F     Y  N  +  F     P
Sbjct: 378 VLASRVPVAEVRVGDRVAFAMAGAYAWNISHHDFLMHPRP 417


>gi|154253335|ref|YP_001414159.1| Orn/DAP/Arg decarboxylase 2 [Parvibaculum lavamentivorans DS-1]
 gi|154157285|gb|ABS64502.1| Orn/DAP/Arg decarboxylase 2 [Parvibaculum lavamentivorans DS-1]
          Length = 382

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 50/344 (14%), Positives = 111/344 (32%), Gaps = 14/344 (4%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSSLYEV 63
           P + I    L     + +         +L A KC     +   L+        ++S+ E+
Sbjct: 25  PVFCIFPDILKTRARSFVEGFPGT---VLYATKCNPHPYVLKALSDAGIHHFDTASISEI 81

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
               E        +N   K        ++   I    V   ++           I + + 
Sbjct: 82  AKVTELLPEAHCYFNHPVKGRGALEAAADVYGITDYVVDHPDELDKVISIAGTDITIEVR 141

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV-NGLMFHNNCENKSFLCFSAMLKNI 182
            +    K +     +  +          E+  +     + FH   +      F   ++  
Sbjct: 142 IATPKGKVVYDLSAKFGAAPEGAVTLLKEASRRGCRTAIAFHVGSQCLDPDAFRVAMEMA 201

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKD--YPVKDFCQRLKEFSEKY--SVQIYLEPGEAIV 238
            +       ++E++ +GGG     K    P++ +   +    E+    V ++ EPG A+V
Sbjct: 202 MRVAEEAGVKLEYLDVGGGFPAIYKSNVPPLQTYFDTIAAARERLGIEVPLFAEPGRALV 261

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY----TAMVCG 294
               ++ T V     +   +        + + D  L      +  +           + G
Sbjct: 262 AEACSVLTQVHLRKGDDLYINDGIYGCLSEIRDGDLDPPVRALTKDGKVEGELRPFRIFG 321

Query: 295 RSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
            +C + D+    F+  + ++ GD + F  +  Y+I  +  FNG 
Sbjct: 322 PTCDSLDVLKLPFYLPENIREGDWVEFGLMGAYSIGMQTGFNGF 365


>gi|325924786|ref|ZP_08186222.1| diaminopimelate decarboxylase [Xanthomonas perforans 91-118]
 gi|325544802|gb|EGD16149.1| diaminopimelate decarboxylase [Xanthomonas perforans 91-118]
          Length = 398

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 52/358 (14%), Positives = 104/358 (29%), Gaps = 31/358 (8%)

Query: 21  ALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGGETHAY-NV 79
            +  +  A  +L  A K  A   +  TL  ++DG  ++S  E+   H +       +   
Sbjct: 41  WMRAQLPAQCELFYAAKANAEPPILQTLAAHVDGFEAASGGELAWLHAQQPQAPLLFGGP 100

Query: 80  AYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRINPS---VSYSKFILAD 135
              D E+    +  D  +   ++S+L +    A    + + + +  +          L  
Sbjct: 101 GKLDTELAQAAALPDCTVHVESLSELERLAAIAAHAGRCVPVFLRMNIAVPGAQSTRLMM 160

Query: 136 PNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH 188
             +P    G    D   +  +        + G  FH     +S      ++    +    
Sbjct: 161 GGQPSP-FGLDPSDLDAAIRRVQANPSLRLEGFHFHLMSHQRSAAAQLHLVAAYLRTVQQ 219

Query: 189 F-----ITQIEWISLGG---GIHFTDKDYPVKDFCQRLKEFSEKYSV--QIYLEPGEAIV 238
           +     +  +   + GG        D  +    FC  L     ++    ++ LEPG  + 
Sbjct: 220 WRQTYALGPLRVNAGGGFGVDYRAPDASFDWAGFCAGLPALLGEHGTDLRLRLEPGRYVS 279

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG-------PYTAM 291
            +       VLD+  +      V      H                 G            
Sbjct: 280 ASCGWYLMEVLDLKRSHGAWFAVARGGTHHFRTPAAQAHDHPFRVLRGTRTPVISDTPVT 339

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIAVKNVD 348
           + G+ C   D+         +  GD ++F     Y  N  +  F     P +      
Sbjct: 340 LVGQLCTPKDVLARDQHVAALAPGDCLAFPLAGAYAWNISHQQFLMHPPPQMVFLTEG 397


>gi|296114391|ref|ZP_06833045.1| ornithine decarboxylase [Gluconacetobacter hansenii ATCC 23769]
 gi|295979152|gb|EFG85876.1| ornithine decarboxylase [Gluconacetobacter hansenii ATCC 23769]
          Length = 376

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 51/367 (13%), Positives = 106/367 (28%), Gaps = 32/367 (8%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP  ++D  ++                ++  A+K   A  + D L        ++S  E+
Sbjct: 16  TPCLVVDVDRVEERYSALHAALPL--ARIYYAVKANPAAAILDRLVGLGSAFDAASWEEI 73

Query: 64  MLG-HEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            +        +  ++            A  +  D   F+   +L K    A        L
Sbjct: 74  QMCLRAGAAPQDISFGNTVKKVSAIAQAYEAGIDMFAFDCAEELEKLARHAPGARVYCRL 133

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
            +    +             +      +        +  GL FH   +      + A + 
Sbjct: 134 IVENEGADWPLSRKFGTTLDNARDLMLR--ARDMGMDPYGLSFHVGSQQTETGAYEAAIA 191

Query: 181 NIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDF------CQRLKEFSEKYSVQIYL 231
            +   F        ++  ++LGGG     +D               + E       ++ +
Sbjct: 192 RVGMLFTDLKAAGLELRMVNLGGGFPIRYRDDVPGIDRFALAISHAMTEHFGNDLPEMIV 251

Query: 232 EPGEAIVTNTTTLNTTVL---------DISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
           EPG  IV +   +++ V+          +     ++       E           +    
Sbjct: 252 EPGRFIVGDAGVVSSEVVLVSRRGINDGVRWVYLDIGRFGGLAETEGEAIRYGIRTPHDG 311

Query: 283 PNTGPYTAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINR-KNWFNGI- 337
             TGP    + G +C   DI  E   ++    ++ GDR+       Y        FNG+ 
Sbjct: 312 MATGP--VAIAGPTCDGADIMYEKTPYNLPLGLESGDRVELLSTGAYVSTYCSTGFNGLA 369

Query: 338 NMPTIAV 344
            +    +
Sbjct: 370 PLSEHYI 376


>gi|66819325|ref|XP_643322.1| group IV decarboxylase [Dictyostelium discoideum AX4]
 gi|60471373|gb|EAL69333.1| group IV decarboxylase [Dictyostelium discoideum AX4]
          Length = 431

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 61/398 (15%), Positives = 125/398 (31%), Gaps = 43/398 (10%)

Query: 7   YL--IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           Y+   +  +       A    K        A+KC     +     +   G   +S  E+ 
Sbjct: 34  YVMLYNLDEFRALAKEACDNLKGLQTM---AVKCNPVMSLMKEAIKAGLGAEVASFGELR 90

Query: 65  LG-HEKFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI---- 118
           +     F      + +      E++  L+    I  +   +L   +    K  K+     
Sbjct: 91  IAEIAGFEPSKIIFDSPIKTKKELEYALNLGVVINIDNFEELETIESIVSKFSKEKYESL 150

Query: 119 --GLRINPSVSYSKFILADPNRPFSRLGEKCKD---KIESEIKN--VNGLMFHNNCE--- 168
             G+R+NP V   K        P S+ G   +     I++ ++N  + G+  H   +   
Sbjct: 151 SLGIRVNPQVGAGKLTDLSTGVPTSKFGIGIEHKDKIIDAYVRNKFLKGVHIHVGSQGFE 210

Query: 169 ---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEF 221
                        L           +QI + ++GGG+    +          +   +K+ 
Sbjct: 211 ISNISESAVKVMNLVKEINARDDTKSQITFFNMGGGLSVNFESEETSPTFTQYANHMKQL 270

Query: 222 SEKYSVQIYL---EPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQ- 276
             +     +L   E G +       + +TV     +  + + I  +    ++     +  
Sbjct: 271 LPELFNGEFLLITEFGRSYWAKCGVVVSTVEYTKSSGDREIAICHAGANMYIRTVYQFPL 330

Query: 277 ESATIYPNTGPYTA--------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
               +                  + G  C A D+  +     P+K  D I   D   Y +
Sbjct: 331 WRIRVTIFDSNGEYKTGNEKITDIAGPCCFAADVLVKERLLPPIKKDDFIMAHDSGAYML 390

Query: 329 NRKNWFNGINMPTIAVKN-VDGTIKAIRE-FSYNDYYN 364
           +  + +N    P I   N  + TI+ I++  +  D  N
Sbjct: 391 SSYSHYNLRLAPPIFSFNTTNNTIELIKKGETIEDKIN 428


>gi|73974237|ref|XP_858697.1| PREDICTED: similar to ornithine decarboxylase antizyme inhibitor
           isoform 9 [Canis familiaris]
          Length = 434

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 60/358 (16%), Positives = 111/358 (31%), Gaps = 18/358 (5%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  K++        I     +K    +KC +   + + L     G   SS  E+ L
Sbjct: 40  FFVGDLGKIVKKHSQWQNIVAQ--IKPFYTVKCNSTPAVLEILAALGTGFACSSKTEMAL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             E     E   Y    K        +          +++   K      + K+ L I  
Sbjct: 98  VQELGVSPENIIYISPCKQVSQIKYAAKIGVNTMTCDNEVELKKIARNHPNAKVLLHIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             +              +      +  +     + G+ FH +   K    +   L +   
Sbjct: 158 EDNIGGEEGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARC 217

Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238
            F   G F   +  + +GGG      +   V      L    F E   ++I  EPG   V
Sbjct: 218 VFDMAGEFGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDVYFPEGSGIKIISEPGSYYV 277

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEA--------HVPDYLLYQESATIYPNTGP-YT 289
           ++  TL   ++   E       +    +            D     E    Y    P +T
Sbjct: 278 SSAFTLAVNIIAKKELHDEPAFMYYMNDGIYGSFASKLSEDLNTIPEVHKKYKKDEPLFT 337

Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
           + + G SC   D   E      + +GD + F+++   +++  + FN    P I     
Sbjct: 338 SSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSLHEPSAFNDFQRPAIYYMMS 395


>gi|178057321|ref|NP_001116665.1| arginine decarboxylase [Sus scrofa]
 gi|170780176|gb|ACB37315.1| arginine decarboxylase [Sus scrofa]
          Length = 460

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/358 (14%), Positives = 116/358 (32%), Gaps = 33/358 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           ++L D   ++       +++    V+   A+KC ++ G+   L +   G + ++  E+ L
Sbjct: 41  FFLADLGAVVR--KHFYFLKCLPRVRPFYAVKCNSSPGVLKVLAELGLGFSCANKAEMEL 98

Query: 66  G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             H         Y    K        +     + +  +++   K        K+ L I  
Sbjct: 99  VQHIGVPTSKIIYANPCKQIAQIKYAAKHGVQLLSFDNEMELAKVVKSHPSAKMVLCIAT 158

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S+S   L+       +      +  +     V G+ FH          ++  + +   
Sbjct: 159 DDSHSLSHLSFKFGASLKSCRHLLENAKRNHMEVVGVSFHIGSGCPDPQAYAQSIADARL 218

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPGE 235
            F        ++  + LGGG    +      +    +        F E   + I  + G 
Sbjct: 219 VFEMGAELGHRMHILDLGGGFPGVEGAKVRFEEIASVINSALDLYFPEGCGIDILAKLGR 278

Query: 236 AIVTNTTTLNTTVL-------DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY 288
             VT+  TL  +++       D     +       ++  H+ + +    ++ ++ NT P 
Sbjct: 279 YYVTSAFTLAVSIIAKKEVLLDQPGREEETGSAPKTIVYHLGEGVYGIFNSVLFDNTCPT 338

Query: 289 TA--------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                            + G      D   E  +   + +GD + FE++  Y +   +
Sbjct: 339 PVLPKKPSPEQPLYSSSLWGPVVDGCDCVAEGLWLPSLHVGDWLVFENMGAYTVGMGS 396


>gi|119485296|ref|XP_001262180.1| ornithine decarboxylase, putative [Neosartorya fischeri NRRL 181]
 gi|119410336|gb|EAW20283.1| ornithine decarboxylase, putative [Neosartorya fischeri NRRL 181]
          Length = 413

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 45/348 (12%), Positives = 101/348 (29%), Gaps = 31/348 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+++ D  +++              V    A+KC     +   L     G   +S+ E+ 
Sbjct: 31  PFFVADLGQVIRQHRRWR--VNLPDVHPFYAVKCNPDPNLLKLLANLGTGFDCASIEELR 88

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                        +    K        +          +       +    + ++ LRI 
Sbjct: 89  TVLSLGVDPCRIIFANPCKSASSLVFAARTGVTRTTFDNLDELDTIRTFLPNAELVLRIY 148

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
            S S +   L +              +      +V G+ FH      +   +   +++ +
Sbjct: 149 ASDSDALIDLGEKFGATVEASLPLLQRARELGLDVCGVSFHVGTGASNASAYVNAIRHAK 208

Query: 184 KEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
             FG+       +  + +GGG    + +         LKE      V++  EPG   V +
Sbjct: 209 IVFGYGKSLGFDMNLLDIGGGFQDCNLEDIACTLRPMLKEEF-PSGVRLLAEPGRYYVRS 267

Query: 241 TTTLNTTVLDISENIKNLVIVDSSV-----------------EAHVPD------YLLYQE 277
             TL   +L    +I         +                 +  V        +  +  
Sbjct: 268 AYTLACKILSRRRHIGTDDHDRPDMLYQNDGVYGNFMNVLIEKETVRPSLVAYTWPFHSH 327

Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFE-KPVKIGDRISFEDVA 324
                     +   + G +C + D   +       ++IGD + ++++ 
Sbjct: 328 GNDTRRKLEEHRYTIWGPTCDSMDCVAKDVPMTSEIRIGDWLKYKNMG 375


>gi|323343102|ref|ZP_08083333.1| hypothetical protein HMPREF0357_11514 [Erysipelothrix rhusiopathiae
           ATCC 19414]
 gi|322463166|gb|EFY08361.1| hypothetical protein HMPREF0357_11514 [Erysipelothrix rhusiopathiae
           ATCC 19414]
          Length = 390

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 62/382 (16%), Positives = 119/382 (31%), Gaps = 27/382 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTP Y+ D   L  ++        N   KL  A+K      +   L++ +D     S  
Sbjct: 13  LKTPCYIFDVDFLEEHVKEIKASLPN-NTKLCYAMKANPF--LVGILDKMVDSFEVCSPG 69

Query: 62  EVMLG-HEKFGGETHAYNVAY---KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
           E  +             +  Y   +D      +         ++ QL    D + +  K+
Sbjct: 70  EYRICQRNNISNLKIILSGVYKNSEDIREIIQMEEQPIYTVESMKQLELLNDLSTEYQKQ 129

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLM-FHNNCENKSFLCFS 176
           I + +      S            R+ ++       +   +        +  NK      
Sbjct: 130 INVILRL---TSGNQFGMDASEIERVLDQTNRYRFIKWHGIQLYSGTQKHKLNKVLGEIE 186

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK---YSVQIYLEP 233
           ++   IE     +   +  +  G G+     +               +   Y   I LE 
Sbjct: 187 SLKSYIETLRSRYQISLPCLEFGPGLGVQYFESDKPTLSVSEFSSVLRSLNYDGTIVLEM 246

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY-----LLYQESATIYPNTGPY 288
           G  IV    T  T V+DI  N      +      HV  Y     +       +     P 
Sbjct: 247 GRIIVAACGTYLTRVVDIKTNDMKHYAILDGGIHHVSYYGQFLGMKCPSIERVDMEKSPE 306

Query: 289 ---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPTIAV 344
                 +CG  C   D+  + +    + + D ++F++V  Y+I    + F   ++P + +
Sbjct: 307 LHAQWNLCGSLCTVADVLIKDYETP-LALNDVVAFKNVGAYSITEGISLFLSRDLPQVNL 365

Query: 345 KNVDGTIKAIREFSYNDYYNNL 366
                 I+ IR  +     + L
Sbjct: 366 YRKQTGIEIIR-DTIE--IDRL 384


>gi|209965013|ref|YP_002297928.1| lysine [Rhodospirillum centenum SW]
 gi|209958479|gb|ACI99115.1| lysine [Rhodospirillum centenum SW]
          Length = 415

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 49/364 (13%), Positives = 99/364 (27%), Gaps = 23/364 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYE 62
           P + +    L       +     A G  +L A+KC     +   L +        +S  E
Sbjct: 38  PLHCLRPAVLKATARRFVAAFTEAVGGDVLYAVKCNPDPAVLRALWKGGVRHFDCASPAE 97

Query: 63  VMLGHEKFGGETHAYNV---AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK---AQKLHK 116
           V +    F      Y           +            ++V +L K +++   A+ L  
Sbjct: 98  VRVVRSMFPEAVIHYMHPVKNRAAIRVAYRELGVRDFALDSVEELAKLREETGDARDLGL 157

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
            + L +    +           P +  G   + +  S    V    FH   +  +   + 
Sbjct: 158 IVRLALPKGNATYDLSGKFGAAPDAAAGLLRRARALSPRIGV---CFHVGSQCLTPDSYG 214

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
             L+            ++ + +GGG   +  D         ++      +          
Sbjct: 215 DALRLAGGVIRASGVPVDVVDVGGGFPVSYPDMTPPPLDAYMEAIRAGIAGLGLPAGTRV 274

Query: 237 IVTNTTTLNTT----VLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287
                  L       V+ + +   + + V+  V   + D  +                  
Sbjct: 275 WCEPGRALVAAGSSVVVQVEKRRGDELFVNDGVYGSLSDAGVPAFRFPCRLVRPAGTDTA 334

Query: 288 --YTAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344
                   G +C + D   G F     V+ GD I    +  Y    +  FNG +   +  
Sbjct: 335 PLMPFSFWGPTCDSADRMKGPFLLPADVREGDWIEIGQLGAYGATLRTEFNGFDQARLVE 394

Query: 345 KNVD 348
               
Sbjct: 395 VADG 398


>gi|302386984|ref|YP_003822806.1| Orn/DAP/Arg decarboxylase 2 [Clostridium saccharolyticum WM1]
 gi|302197612|gb|ADL05183.1| Orn/DAP/Arg decarboxylase 2 [Clostridium saccharolyticum WM1]
          Length = 390

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/375 (13%), Positives = 116/375 (30%), Gaps = 33/375 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+Y+ D   L   +     +   + V+L  A+K      +   +   ++     S  E
Sbjct: 14  QTPFYIFDTDVLALQIRKIRDVL-GSDVELCYAMKANPF--VIRDIEGLVESFEVCSPGE 70

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAV----LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
           + +        E    +  YK  E          N       ++S        +++L   
Sbjct: 71  LSICERAGIHMEKVVMSGVYKKPEDVEYALKQYGNKIIYTAESLSHWQTLASCSKRLQLP 130

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
           + + +  +         +       L  +       E   + G+ + +  + +S     +
Sbjct: 131 VRVLLRLTSG-------NQFGMDESLIRQIIAMGAHEFITIEGIQYFSGTQKRSLKKLES 183

Query: 178 MLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE-----FSEKYSVQ 228
            L  +E+        +  +++ +  G G+     +   K+  + L           +  +
Sbjct: 184 ELNMLEQFCQELNSEYGFRVKRLEYGPGLPICYFEEEKKEEEEMLNGLAVLLKHRSFEGR 243

Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVI------VDSSVEAHVPDYLLYQESATIY 282
           I LE G  I  +  +  T V D+  N               +    V             
Sbjct: 244 ITLEMGRYITASCGSYVTRVADLKTNKGEPYCIVDGGIHQLTYYGQVLAMKKPPILPFHE 303

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN--RKNWFNGINMP 340
                    VCG  C A D+  + +  + ++ GD I F+    Y++       F    +P
Sbjct: 304 RKGEEKKWTVCGSLCTASDVLVKQYPFQDLQPGDPIIFQMAGAYSVTEGMA-LFLSRELP 362

Query: 341 TIAVKNVDGTIKAIR 355
            + + +     +  R
Sbjct: 363 QVLLYSAKEHFRIAR 377


>gi|218779264|ref|YP_002430582.1| Orn/DAP/Arg decarboxylase 2 [Desulfatibacillum alkenivorans AK-01]
 gi|218760648|gb|ACL03114.1| Orn/DAP/Arg decarboxylase 2 [Desulfatibacillum alkenivorans AK-01]
          Length = 441

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 56/384 (14%), Positives = 118/384 (30%), Gaps = 48/384 (12%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           P Y++D   L  +            +      A+K      +  TL     G   SS  E
Sbjct: 59  PLYVLDHANLKKHAAMFKNAFGACFSDFACYYAMKSNNHPEVSRTLIDQGFGLDVSSGVE 118

Query: 63  VMLGHEKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           V         +         D    +    S    ++ +++ ++++    A +      +
Sbjct: 119 VERALALGAEDVIFSGPGKTDKELFLAVENSGRVKVLMDSLGEMDRLNRLAMQAG--KRV 176

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE---NKSFLCFSA 177
           R+   ++             + LG   K   E     + GL FH +     ++     +A
Sbjct: 177 RVGLRITPPSSPWKKFGVALANLGAAWKKAQECPGLEIQGLQFHTSWNLDPSQQVRTIAA 236

Query: 178 MLKNIEKEFGHFITQIEWISLGGGI-------------------------------HFTD 206
           + + I +     +  ++++ +GGG                                H+  
Sbjct: 237 IGREIGQWSPEMLGALKFLDIGGGYWPQAGEWQVHAVTQAGQVMKLAGLDVDRPLEHYYA 296

Query: 207 KDYPVKDFCQRLKEFSEKY-----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV 261
               +  F Q L +  E +       +I +EPG  +      L   V+D  +    +   
Sbjct: 297 PAQSLDVFAQSLYQAVETHIFSTVPCRICMEPGRWLCNGAMHLLLNVVDKKDGGLVITDA 356

Query: 262 DSSVEAHVPDYLLYQESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
            ++        + Y     +        A  + G  C   D++G  ++ + ++ GD +  
Sbjct: 357 GTNAIGWERYEMDYAPVLNLSRPALDEKACEIMGSLCTPHDLWGLSYWGQDIQPGDVLLI 416

Query: 321 EDVAGYNINRKNWFNGINMPTIAV 344
            D   Y  + K  F  I  P   +
Sbjct: 417 PDQGAYTYSLKQDF--IKAPPRVI 438


>gi|294813014|ref|ZP_06771657.1| Lysine/ornithine decarboxylase [Streptomyces clavuligerus ATCC
           27064]
 gi|294325613|gb|EFG07256.1| Lysine/ornithine decarboxylase [Streptomyces clavuligerus ATCC
           27064]
          Length = 437

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 57/389 (14%), Positives = 110/389 (28%), Gaps = 41/389 (10%)

Query: 8   LIDKQKLLNNLDTALYIRK---NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           L+D   +  +             A V    A+K      +   LN    G   +S  E+ 
Sbjct: 28  LLDVAGIKASATALKEAFAGVTEAPVLHAFAVKAAPLVPVVALLNGEGIGAEVASPGELA 87

Query: 65  LGHE-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK---AQKLHKKIG 119
           +              + A    E+   L     +  +   +L++          +   +G
Sbjct: 88  IARAAGVPAARTVLDSPAKTVRELREALDLGIALNADNPQELSRIDALLAETDGVRSPVG 147

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFHNNCE--- 168
           +RIN  V              S+ G   +D        ++  +   +  L  H+  +   
Sbjct: 148 VRINAQVGAGAIGALSTATATSKFGVALRDPGARAAVVRMFLDRPWLTRLHTHSGSQGVP 207

Query: 169 -NKSFLCFSAMLKNIEKEFGHFIT-QIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY- 225
             +       +    E+        QI+ + +GGG+                    ++  
Sbjct: 208 LARMTEGVRELYALAEEINAAAGRRQIDTLDIGGGLPVNFASDETTPTFAEYAALLKREV 267

Query: 226 ------SVQIYLEPGEAIVTNTTTLNTTVLDIS----ENIKNLVIVDSSVEAHVPDYLLY 275
                    +  E G A++    T+   V          I             V D + +
Sbjct: 268 PGLLDGRYALVTEYGRALLAKHGTILARVEYTKVSGGRPIAVTHAGVQVATRTVYDPVSW 327

Query: 276 QESATIYPNTG------PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
                 Y   G      P    + G +C AGD+  E     P+  GD ++  D   Y  +
Sbjct: 328 PLRIAAYGPDGHPKTGAPVPQDIAGPACFAGDLLAEARELPPLDQGDVVAALDTGAYCFS 387

Query: 330 RKNWFNGINMPTIAVKNVDG---TIKAIR 355
               +N +  P +     D      + +R
Sbjct: 388 NHYGYNSLPRPGVYGYTADATAVDFRLVR 416


>gi|326441439|ref|ZP_08216173.1| diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC
           27064]
          Length = 413

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 57/389 (14%), Positives = 110/389 (28%), Gaps = 41/389 (10%)

Query: 8   LIDKQKLLNNLDTALYIRK---NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           L+D   +  +             A V    A+K      +   LN    G   +S  E+ 
Sbjct: 4   LLDVAGIKASATALKEAFAGVTEAPVLHAFAVKAAPLVPVVALLNGEGIGAEVASPGELA 63

Query: 65  LGHE-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK---AQKLHKKIG 119
           +              + A    E+   L     +  +   +L++          +   +G
Sbjct: 64  IARAAGVPAARTVLDSPAKTVRELREALDLGIALNADNPQELSRIDALLAETDGVRSPVG 123

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFHNNCE--- 168
           +RIN  V              S+ G   +D        ++  +   +  L  H+  +   
Sbjct: 124 VRINAQVGAGAIGALSTATATSKFGVALRDPGARAAVVRMFLDRPWLTRLHTHSGSQGVP 183

Query: 169 -NKSFLCFSAMLKNIEKEFGHFIT-QIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY- 225
             +       +    E+        QI+ + +GGG+                    ++  
Sbjct: 184 LARMTEGVRELYALAEEINAAAGRRQIDTLDIGGGLPVNFASDETTPTFAEYAALLKREV 243

Query: 226 ------SVQIYLEPGEAIVTNTTTLNTTVLDIS----ENIKNLVIVDSSVEAHVPDYLLY 275
                    +  E G A++    T+   V          I             V D + +
Sbjct: 244 PGLLDGRYALVTEYGRALLAKHGTILARVEYTKVSGGRPIAVTHAGVQVATRTVYDPVSW 303

Query: 276 QESATIYPNTG------PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
                 Y   G      P    + G +C AGD+  E     P+  GD ++  D   Y  +
Sbjct: 304 PLRIAAYGPDGHPKTGAPVPQDIAGPACFAGDLLAEARELPPLDQGDVVAALDTGAYCFS 363

Query: 330 RKNWFNGINMPTIAVKNVDG---TIKAIR 355
               +N +  P +     D      + +R
Sbjct: 364 NHYGYNSLPRPGVYGYTADATAVDFRLVR 392


>gi|254392330|ref|ZP_05007514.1| lysine/ornithine decarboxylase [Streptomyces clavuligerus ATCC
           27064]
 gi|197706001|gb|EDY51813.1| lysine/ornithine decarboxylase [Streptomyces clavuligerus ATCC
           27064]
          Length = 448

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 57/389 (14%), Positives = 110/389 (28%), Gaps = 41/389 (10%)

Query: 8   LIDKQKLLNNLDTALYIRK---NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           L+D   +  +             A V    A+K      +   LN    G   +S  E+ 
Sbjct: 39  LLDVAGIKASATALKEAFAGVTEAPVLHAFAVKAAPLVPVVALLNGEGIGAEVASPGELA 98

Query: 65  LGHE-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK---AQKLHKKIG 119
           +              + A    E+   L     +  +   +L++          +   +G
Sbjct: 99  IARAAGVPAARTVLDSPAKTVRELREALDLGIALNADNPQELSRIDALLAETDGVRSPVG 158

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFHNNCE--- 168
           +RIN  V              S+ G   +D        ++  +   +  L  H+  +   
Sbjct: 159 VRINAQVGAGAIGALSTATATSKFGVALRDPGARAAVVRMFLDRPWLTRLHTHSGSQGVP 218

Query: 169 -NKSFLCFSAMLKNIEKEFGHFIT-QIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY- 225
             +       +    E+        QI+ + +GGG+                    ++  
Sbjct: 219 LARMTEGVRELYALAEEINAAAGRRQIDTLDIGGGLPVNFASDETTPTFAEYAALLKREV 278

Query: 226 ------SVQIYLEPGEAIVTNTTTLNTTVLDIS----ENIKNLVIVDSSVEAHVPDYLLY 275
                    +  E G A++    T+   V          I             V D + +
Sbjct: 279 PGLLDGRYALVTEYGRALLAKHGTILARVEYTKVSGGRPIAVTHAGVQVATRTVYDPVSW 338

Query: 276 QESATIYPNTG------PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNIN 329
                 Y   G      P    + G +C AGD+  E     P+  GD ++  D   Y  +
Sbjct: 339 PLRIAAYGPDGHPKTGAPVPQDIAGPACFAGDLLAEARELPPLDQGDVVAALDTGAYCFS 398

Query: 330 RKNWFNGINMPTIAVKNVDG---TIKAIR 355
               +N +  P +     D      + +R
Sbjct: 399 NHYGYNSLPRPGVYGYTADATAVDFRLVR 427


>gi|166713024|ref|ZP_02244231.1| diaminopimelate decarboxylase [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 398

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 48/354 (13%), Positives = 100/354 (28%), Gaps = 29/354 (8%)

Query: 21  ALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGGETHAY-NV 79
            +  +  A  +L  A K  A   +  TL  ++DG  ++S  E+   H +       +   
Sbjct: 41  WMRAQLPAQCELFYAAKANAEPPILQTLAAHVDGFEAASGGELAWLHAQQPQAPLLFGGP 100

Query: 80  AYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNR 138
              D E+    +  D  +   ++S+L +    A    + + + +  +++           
Sbjct: 101 GKLDTELAQAAALPDCTVHVESLSELERLAAIAAHAGRCVPVFLRMNIAVPGAQSTRLTM 160

Query: 139 PFS--RLGEKCKDKIESEI-------KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHF 189
                  G    D   +           + G  FH     +       ++    +    +
Sbjct: 161 GGHPSPFGLDPDDLDAAMQLLQASPSLRLEGFHFHLMSHQRDAAAQLQLIAAYLRTVQRW 220

Query: 190 ITQ----IEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSV--QIYLEPGEAIVT 239
                     ++ GGG           +    FC  L     ++    ++ LEPG  +  
Sbjct: 221 RHTYALGPLRVNAGGGFGVDYLAPESSFDWAGFCAGLPALLGEHGTDLRLRLEPGRYVSA 280

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT-------AMV 292
           +       VLD+  +      +      H                 G  T         +
Sbjct: 281 SCGWYLMEVLDLKRSHGAWFAIARGGTHHFRTPAAQAHDHPFRVLRGARTPVLRDTPVTL 340

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIAVK 345
            G+ C   D+         +  GD ++F     Y     +  F     P +   
Sbjct: 341 VGQLCTPKDVLARDQSVAALAPGDCLAFPLAGAYAWTISHQHFLMHPAPQMVFL 394


>gi|297665628|ref|XP_002811146.1| PREDICTED: LOW QUALITY PROTEIN: arginine decarboxylase-like [Pongo
           abelii]
          Length = 461

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 50/359 (13%), Positives = 115/359 (32%), Gaps = 37/359 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++       +++    V+   A+KC ++ G+   L Q   G + ++  E+ L
Sbjct: 41  FFVADLGAIVR--KHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 98

Query: 66  G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             H              K        +     + +  +++   K        K+ L I  
Sbjct: 99  VQHIGVPASKIICANPCKQIAQIKYAAKHGIRLLSFDNEMELAKVVKSHPSAKMVLCIAT 158

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S+S   L+       +      +  +     V G+ FH          ++  + +   
Sbjct: 159 DDSHSLSRLSLKFGVSLKSCRHLLENAKKSHVEVVGVSFHIGSGCPDPQAYAQSIADARL 218

Query: 185 EFG---HFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
            F        ++  + LGGG   T+      ++            F E   V I+ E G 
Sbjct: 219 VFEMGTELGHKMHILDLGGGFPGTEGTKVRFEEIASMINSALDLYFPEGCGVDIFAELGR 278

Query: 236 AIVTNTTTLNTTVLDI-----------------------SENIKNLVIVDSSVEAHVPDY 272
             VT+  T+  ++                            +     I +S +  ++   
Sbjct: 279 YYVTSAFTVAVSITAKKEVLLDQPGREEENGSTRKTIVYHLDEGVYGIFNSVLFDNICPI 338

Query: 273 LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
            + Q+  +       Y++ + G +    D   E  +   + +GD + F+++  Y +   
Sbjct: 339 PILQKKPSTEQP--LYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNMGAYTVGMG 395


>gi|289617669|emb|CBI61392.1| unnamed protein product [Sordaria macrospora]
          Length = 483

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/384 (14%), Positives = 100/384 (26%), Gaps = 56/384 (14%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++        +      VK   A+KC     +   L     G   +S  E+  
Sbjct: 83  FFVADLGEVYR--QHLRWKLNLPRVKPFYAVKCNPDDRLLRLLAALGTGFDCASKAEIEQ 140

Query: 66  G-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                       Y    K               + F+   +L K           + +  
Sbjct: 141 VLRMGVDPSRIIYAQPCKTNSYVRYVAQQGVRQMTFDNADELRKIARLYPDAELFLRILT 200

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           + S S  +  L       S  G            +V G+ FH          F   +++ 
Sbjct: 201 DDSSSLCRLSLKFGASLDSTDG--LLGLARQLGLSVVGVSFHVGSGASDPTAFLKAVQDA 258

Query: 183 EKEF---GHFITQIEWISLGGGIHFTDKDYPVKD--FCQRLKEFSEKYSVQIYLEPGEAI 237
              F     +   ++ + +GGG    D    +         + F     V +  EPG   
Sbjct: 259 HVVFQQAAAYGYNLKTLDVGGGFCSDDTFEQMASVLRAALDEYFPAHTGVNLIAEPGRYY 318

Query: 238 VTNTTTLNTTVLD---------------------------------ISENIKNLVIVDSS 264
            ++  TL   ++                                  +  N        S 
Sbjct: 319 ASSAFTLACNIIARRTIQDGSAVSVSDSSSSMSDDGSMNNGDASYMVYVNDGLYGNFSSI 378

Query: 265 VEAHVPDY----------LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VK 313
           +  H              +    +A    +       + G +C   D   E    +  + 
Sbjct: 379 MFDHQHPVAKILRAGGRTMYDSVAAHESASEDAIEYSIWGPTCDGIDRITESIRFREILD 438

Query: 314 IGDRISFEDVAGYNINRKNWFNGI 337
           +GD + FED+  Y       FNG 
Sbjct: 439 VGDWLYFEDMGAYTKCSATTFNGF 462


>gi|73949907|ref|XP_535320.2| PREDICTED: similar to ornithine decarboxylase-like protein isoform
           1 [Canis familiaris]
          Length = 460

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/363 (14%), Positives = 116/363 (31%), Gaps = 35/363 (9%)

Query: 6   YYLIDK-QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           +++ D    +  +      +     V+    +KC ++ G+   L +   G + ++  E+ 
Sbjct: 41  FFVADLGAVVRKHFCLLKCL---PRVRPFYTVKCNSSPGVLKVLAELGLGFSCANKAEME 97

Query: 65  LG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           L            Y    K        +     + +  +++   K        K+ L I 
Sbjct: 98  LVQRIGVPASKIVYANPCKQIAQIKYAAKHGVRLLSFDNEVELAKVVKSHPSAKMVLCIA 157

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S+S   L+       +      +  +     V G+ FH          ++  + +  
Sbjct: 158 TDDSHSLSHLSFKFGASLKSCRHLLENAKRSHVEVVGVSFHVGSGCPDLHAYTQSIADAR 217

Query: 184 KEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPG 234
             F        ++  + LGGG    +      +    +        F E   V I    G
Sbjct: 218 LVFEMGAELGHRMHILDLGGGFPGLEGAKVRFEEIATVINSALDLYFPEGCGVDILARLG 277

Query: 235 EAIVTNTTTLNTTVL-------DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287
              VT+  TL  +++       D     +       ++  H+ + +    ++ ++ NT P
Sbjct: 278 RYYVTSAFTLAVSIIAKKEVLLDQPGREEETGSTPKTIVYHLGEGVYGIFNSVLFDNTCP 337

Query: 288 --------------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                         Y++ + G      D   E  +   + +GD + FE++  Y +   + 
Sbjct: 338 TPILQKKSSTEQPLYSSSLWGPVADGSDCVAEGLWLPQLHVGDWLVFENMGAYTVGMGSL 397

Query: 334 FNG 336
           F G
Sbjct: 398 FGG 400


>gi|300787405|ref|YP_003767696.1| ornithine decarboxylase [Amycolatopsis mediterranei U32]
 gi|299796919|gb|ADJ47294.1| ornithine decarboxylase [Amycolatopsis mediterranei U32]
          Length = 536

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 57/371 (15%), Positives = 109/371 (29%), Gaps = 32/371 (8%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67
           + D   +       L   +   V +  A+K      +   L +   G  ++S  E+ L  
Sbjct: 14  VYDLTGIERQYHALLD--ELPDVSVRFAVKACPHPAVLACLARVGAGFDAASPGEIELTL 71

Query: 68  --EKFGGETHAYNVAYKDCEIDAVLS-NCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                  + H  N    D +I A  S    T   + V  +      A   H    +    
Sbjct: 72  RNGALPDDVHYGNTVKSDADIAAAHSLGITTFATDCVQDVRAIARHAPGAHVFCRVTTTG 131

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK---N 181
             +     L         +G   + +    +    GL  H   +  +   +   L     
Sbjct: 132 DGALW--PLTGKCGSDDAVGVLTEARRLGLVPA--GLSIHVGSQQMTASAWRQALDTLVA 187

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDK--------DYPVKDFCQRLKEFSEKYSV-----Q 228
           +         Q+  ++LGGG+               P  +    ++E   +        +
Sbjct: 188 LVTSLAAQGIQLGHVNLGGGLPAHGYLSKDGVPLVPPTGEIFTAIREGMGRLREAGGRLR 247

Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG-- 286
             +EPG  +V +  T+   V  ++   +  + +       + +    +   T     G  
Sbjct: 248 FLVEPGRHLVADHGTIRAHVARLTSRGRRWLYLSCGKFNGLYETDQVRYRLTFPGQAGGA 307

Query: 287 PYTAMVCGRSCLAGDIF--GEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNG-INMPTI 342
              AMV G +C + D F  G       +  GD +       Y I      FNG   +P +
Sbjct: 308 EVPAMVAGPTCDSDDSFGGGPVVVPADLASGDPVWIHSTGAYAIGYTTVGFNGFRPLP-V 366

Query: 343 AVKNVDGTIKA 353
                +     
Sbjct: 367 LAVRTEKIRPI 377


>gi|126330250|ref|XP_001366754.1| PREDICTED: hypothetical protein isoform 1 [Monodelphis domestica]
          Length = 456

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 55/357 (15%), Positives = 114/357 (31%), Gaps = 34/357 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            T +++ D   ++       +++    V+    +KC ++ G+   L +   G + ++  E
Sbjct: 35  GTSFFVADLGDVVK--KHLRFLKNLPRVRPFYVVKCNSSPGVLRALAELGLGFSCANKAE 92

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           + L            Y    K        +     + +  +++   K        ++ LR
Sbjct: 93  MELLRHIGVPAHKIIYTSPCKQAAQVKQAARLGIRMLSFDNEVELAKVARSHPTARMVLR 152

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN----KSFLCFSA 177
           I    S S   L+       +      +  +     V G+ FH         ++F    A
Sbjct: 153 IATDDSCSPARLSMKLGATLKSCRHLLETAKKMNMEVVGVSFHVGSGCSSDPQAFTQSIA 212

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSVQIYL 231
             + + +       ++  + LGGG   T+      ++            F E   V I  
Sbjct: 213 DARLVFEMGTELGYRMHILDLGGGFPGTEDSKVRFEEMASVINSALDMYFPEGCGVDILA 272

Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-------HVPD--------YLLYQ 276
           EPG   V +  TL   ++   E   +   +D    A       H+ +             
Sbjct: 273 EPGRYYVASAFTLAVRIVAKKEVPSDQTGLDEEDGASPKSIVYHISEGVYGAFNCVFFDN 332

Query: 277 ESATIYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
                     P      Y++ + G +C   D   E      +++GD + FE++  Y 
Sbjct: 333 ACPMPILQKKPSPDQRVYSSSLWGPTCDDLDHVAEGLCLPELQLGDWLIFENMGAYT 389


>gi|242045640|ref|XP_002460691.1| hypothetical protein SORBIDRAFT_02g033250 [Sorghum bicolor]
 gi|241924068|gb|EER97212.1| hypothetical protein SORBIDRAFT_02g033250 [Sorghum bicolor]
          Length = 429

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/358 (14%), Positives = 104/358 (29%), Gaps = 30/358 (8%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67
           +++  K+           +  GV    A+KC     +   L     G   +S  E+    
Sbjct: 60  VLNLSKVAELFSAWRRGLE--GVPPYYAVKCNPNPALLGALAALGAGFDCASPAEMDAVL 117

Query: 68  E-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                 +   Y    K             D   F++V +++K +    +    + L++  
Sbjct: 118 ALGVPADRIIYANPCKPESHIQHAASVGVDLTTFDSVEEVDKLRRFHPRCRLLLRLKVPD 177

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
           +   +   L                  +S    V+G+ FH          + A ++    
Sbjct: 178 AAGGALLDLGTKYGARQEEVAPLLRAAQSAGLAVSGVAFHVGSAVSRVGVYDAAVEAARA 237

Query: 185 EFG-----HFITQIEWISLGGGIHFTDKDYPVKDFC--QRLKEFSEKYSV--QIYLEPGE 235
            F        +  +  + +GGG           D       + F +      Q+  EPG 
Sbjct: 238 VFDAAAATRGMPPMRVLDIGGGFTAAATFQDACDVINSALARHFGDDLLPGLQVIGEPGR 297

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV------DSSVEAHV-----PDYLLYQESATIYPN 284
                  TL   V       +            +    H+         + +  A    +
Sbjct: 298 YFAETPFTLAARVFGKRTRGEVREYWIDDGLFGTLCCVHMENYVPRPVPVLRRRAAGDDD 357

Query: 285 -----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                +  + + V G +  + D+  + +    ++IGD + F DV  Y       FNG 
Sbjct: 358 DEGDESETHPSTVFGPTLDSFDVVVKGYHLPELRIGDWLVFHDVGAYTTALSCDFNGF 415


>gi|332185694|ref|ZP_08387441.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein
           [Sphingomonas sp. S17]
 gi|332014052|gb|EGI56110.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein
           [Sphingomonas sp. S17]
          Length = 404

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 47/373 (12%), Positives = 94/373 (25%), Gaps = 34/373 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D    +     A +      + L  A+K      +   +   +DG   +S  E+ 
Sbjct: 35  PLFVYDPA--IVAARVARFRAAFPTIDLHYAIKANPFPPLLAAMAGLVDGFDVASSGELA 92

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
              E  G          +D E+ A +    T+   +  +  +    A++L +   L +  
Sbjct: 93  KVVE-LGKPVSFAGPGKRDAELAAAIDAGITLNLESEGEATRGLAIAERLGRTPRLAVRV 151

Query: 125 SVS-YSKFILADPNRPFSRLGEKCKDKIESEIKNV------NGLMFHNNCENKSFLCFSA 177
           +     +          S  G             V       G   +   +         
Sbjct: 152 NPDVELRGSGMKMGGRPSPFGIDAARVPALVRTIVASGAEWRGFHIYAGSQALDPQAIID 211

Query: 178 MLKNI----EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK--------- 224
                     +           ++LGGG              +++     +         
Sbjct: 212 TQAATIALAARLAEEAGHTPPLVNLGGGFGVPYFAGDQSLDIEQVGTALTQALEARPDIL 271

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY----------LL 274
              +  +E G  +V         V+DI ++      +      H                
Sbjct: 272 RDTRFAIELGRWLVAEAGVYMAHVVDIKDSGGERFAILDGGLNHQLAASGNFGTVVRRNY 331

Query: 275 YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NW 333
               A         T  V G  C   D  G+      V +GD ++      Y  +   + 
Sbjct: 332 PLALAHAMGAEAIQTVSVVGPLCTPLDRLGDRVALPAVHVGDIVAIFLAGAYGASASPSA 391

Query: 334 FNGINMPTIAVKN 346
           F G       +  
Sbjct: 392 FLGHGPADEILAR 404


>gi|253581243|ref|ZP_04858499.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847444|gb|EES75418.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 399

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 57/392 (14%), Positives = 118/392 (30%), Gaps = 42/392 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG---TTSSS 59
            TP Y+ D  K+   +         +  +L  A+K              MD        S
Sbjct: 17  PTPAYVFDLDKMKEFVKKVQSCLGES-AQLCYAMKANPFLT-----GPMMDVVPTFEVCS 70

Query: 60  LYEVMLG-HEKFGGETHAYNVAYKDCEIDAV----LSNCDTIIFNTVSQLNKFKDKAQKL 114
             E  +        E    +  YK+ E                  ++  L    D A +L
Sbjct: 71  PGEFRICERVGVPMERIVLSGVYKNPEDMEYVLSTYGGKGVYTVESLQHLQILNDTAVRL 130

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174
             KI + I                  + + +   D+ +     + GL F++  + K    
Sbjct: 131 GMKITVLIRV------TSGNQFGVDEADIRKIISDRTDYPGVEIEGLQFYSGTQKKDLSQ 184

Query: 175 FSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE------K 224
               L+++++  G        + + +  G G           +  + +            
Sbjct: 185 MKTELEHLDEFIGELKSESGFEAQVLEYGPGFFVPYFKKDKSEDVENILSEFRALLESLN 244

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP----DYLLYQESAT 280
           +  ++ LE G  +        T+++D+  N +   ++      H+        + Q   T
Sbjct: 245 FKGKVVLEMGRFLAAACGYYVTSIVDMKVNKEQPYVIMDGGINHLNYYGQAMAMKQPYCT 304

Query: 281 IYPNTG-------PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-N 332
                G         +  +CG  C   D+  +       ++ D + FE V  Y++     
Sbjct: 305 QLDTEGNEKTGGEEESWNLCGALCTVNDVVVKRFPLHKPQLHDILVFERVGAYSVTEGIY 364

Query: 333 WFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
            F    +P I        ++ +R+  + D  N
Sbjct: 365 LFLSRPLPRIYFWTEGEGLRMVRDGVHTDLLN 396


>gi|163739655|ref|ZP_02147064.1| Putative Ornithine decarboxylase [Phaeobacter gallaeciensis BS107]
 gi|161387114|gb|EDQ11474.1| Putative Ornithine decarboxylase [Phaeobacter gallaeciensis BS107]
          Length = 383

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 47/358 (13%), Positives = 107/358 (29%), Gaps = 23/358 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGTTSSSLYEV 63
           P      + L    +   +        +  A+K      +  + +   + G   +S  E+
Sbjct: 23  PILYFSPRVLHEVANRFQHGFPG---LVTYAVKANPHPAVLSNLVAAGITGFDVASPAEM 79

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                        YN   +     A  +     +   +  S+L+K  D  +     +   
Sbjct: 80  DAVRAASPDAVMHYNNPVRSDVEIAAGIAHGVASWSVDEPSELDKLADVPKSCEIAVRFA 139

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +  + +   F       P   +    +   E     +    FH   + +    +   +  
Sbjct: 140 LPVAGAAYDFGSKFGAEPDMAIELLKRVAAEGWTPAL---CFHPGTQCEDESAWVEYVHA 196

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDK--DYPVKDFCQRLKEFSE----KYSVQIYLEPGE 235
            ++       +I  +++GGG           ++     +    +         +  EPG 
Sbjct: 197 AKRIIDAAGVKIARLNVGGGFAANRDGVAPDLEKVFAAIWVAVDAAFGDDKPGLICEPGR 256

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH--VPDYLLYQESATI-----YPNTGPY 288
           A+V+ + TL   +  I +  + + + D        + D  L      +            
Sbjct: 257 AMVSESFTLAARIKGIRKAGEVVFLNDGVYGGLVDIRDMGLPGRVEVVAADGTRRGADAQ 316

Query: 289 TAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
             +V G +C + D   +        +IGD + F  +  Y+      FNG  +  +A  
Sbjct: 317 PRVVFGPTCDSLDRLPDGLPLPRDTQIGDYVLFPGLGAYSSAMSTQFNGYGLSDVATV 374


>gi|88857445|ref|ZP_01132088.1| Ornithine decarboxylase [Pseudoalteromonas tunicata D2]
 gi|88820642|gb|EAR30454.1| Ornithine decarboxylase [Pseudoalteromonas tunicata D2]
          Length = 386

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 50/374 (13%), Positives = 104/374 (27%), Gaps = 32/374 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP+ ++D   L +     +       V    ++K  +A  + + L        ++S+ 
Sbjct: 15  ISTPFLVVDLDVLAHQYRRLVTAM--PNVVCHYSVKSNSARAVLEKLFALGSCFEAASIN 72

Query: 62  EVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           E+              +    K               +         K        ++  
Sbjct: 73  EIHACFAAGAKANQIHFGNTIKKISDIETAYQLGVQSYAFDCYEELVKLAQYAPGCRVVC 132

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+      + + L                +         GL FH   + +S   +   L 
Sbjct: 133 RLKNDGKGAHWGLCHKFGCSLTEAVDFLSRSVLLGLEPYGLSFHVGSQQQSPDAWHRALV 192

Query: 181 NIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ--------- 228
           +             +I  I+LGGG   +       +      EF  K   +         
Sbjct: 193 DARWVADELVKQDIKIGLINLGGGYPASGYLNDSDNEVDYSMEFFGKCISESLTAIFGSW 252

Query: 229 -----IYLEPGEAIVTNTTTLNTTVL-----DISENIKNLVIVDSSVEAHVPDYLL--YQ 276
                   EPG  ++     + TTV+      +S+ I   + +D      + +     Y 
Sbjct: 253 SGDLKFICEPGRYLLAEAGVVKTTVILACERMLSDQIHRWLYLDVGKFNGLYEASDIKYP 312

Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPV----KIGDRISFEDVAGYNINRKN 332
                   +   + ++ G +C + D+    +    +     +GD + F     Y+ +   
Sbjct: 313 VLHHADQRSDKTSTILTGPTCDSSDMLSYKNHLHHLPFTIAVGDPLMFCCAGAYSNSYSC 372

Query: 333 -WFNGINMPTIAVK 345
             FNG         
Sbjct: 373 KGFNGFEPLAEYYI 386


>gi|332679018|gb|AEE88147.1| Diaminopimelate decarboxylase [Francisella cf. novicida Fx1]
          Length = 403

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/380 (14%), Positives = 107/380 (28%), Gaps = 33/380 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P++  D   L  +      +     VKL  ALK      +    ++       +S+ E+ 
Sbjct: 20  PFFYYDLDMLEAHAKELHRL----PVKLWYALKANPLSRIIKVFDEQKISFDVASIGELD 75

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKI--G 119
                    +   +    K                +  +++Q     +  +K +  +   
Sbjct: 76  QVLAQGVNPKNILHTGPAKSYSQLEYFLAQGVRIFVIESINQFKDLSNLVEKKNINVKVL 135

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLMFHNNCENKS 171
           LR+          +       +  G    D  +        S   ++ G+          
Sbjct: 136 LRVQLVWDDQGGNVLGGGGCVTPFGLSINDWRDFFNSAPNISNNMSIIGMHCFQWGNILC 195

Query: 172 FLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
               S + K I K            ++ I LGGGI               L         
Sbjct: 196 LNKLSQIWKTITKALLDLSEAINVSLKIIDLGGGIGIPYNSSQKAVSINDLISCINNLKK 255

Query: 226 ---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-PDYLLYQESATI 281
               ++ +LE G   V  +    T V+DI       ++V      H+    L  +     
Sbjct: 256 EFPDIEYWLELGRYAVAESGVYITKVVDIKSVNNINLLVTDGGAQHLVRPALTGESFPIE 315

Query: 282 Y----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNG 336
                  +      + G  C + D  G     K + + D + F+    Y        F  
Sbjct: 316 LLREESCSETNEFQIHGPLCTSLDNAGIASLPKDIGLNDYLIFKQTGAYGFTESMPFFLC 375

Query: 337 INMPTIAVKNVDGTIKAIRE 356
            N+P   +    G ++ +R+
Sbjct: 376 HNLPAEIIFYK-GHLQTVRQ 394


>gi|84686159|ref|ZP_01014054.1| Putative Ornithine decarboxylase [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84665686|gb|EAQ12161.1| Putative Ornithine decarboxylase [Rhodobacterales bacterium
           HTCC2654]
          Length = 406

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 49/364 (13%), Positives = 106/364 (29%), Gaps = 24/364 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEV 63
           P      + L                 +  A+K     G+ DTL Q        +S  E+
Sbjct: 46  PVLYFSPETLAETARRFREGFPG---LVTYAVKANDNPGVIDTLAQVGVTSFDVASPAEI 102

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
            L  E     T  YN   +               + ++    + +    ++ + + + + 
Sbjct: 103 ALVREVVPFATLHYNNPVRSIPEIDAAVAAGVASY-SIDGFGELEKLKGRVPQGVEVSVR 161

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN--VNGLMFHNNCENKSFLCFSAMLKN 181
            ++             F    E C D + + +    V  + FH   + +    ++  ++ 
Sbjct: 162 LALPVKGAAYDFG-AKFGEPPEGCVDLLRAVVAAGYVPAMTFHPGTQCEDPAAWARYIET 220

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYP-----VKDFCQRLKEFSEKYSVQIYLEPGEA 236
             +        +  +++GGG                +  + +          +  EPG A
Sbjct: 221 CGEISRKAGVPLARLNVGGGFPSDRGTGARLEPIFAEIARAVAGAFGDTQPHLVCEPGRA 280

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY--------PNTGPY 288
           +V    +L   V  I       +  +  +   + +  +      +             P 
Sbjct: 281 MVAEAFSLAVRVKAIRGCGSLFL--NDGIYGLLAEVPIMGPYGRMRVVAPDGTPRRGAPS 338

Query: 289 TAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
             ++ G +C + D   GE      +  GD + F+ +  Y+      FNG     I     
Sbjct: 339 PRVLYGPTCDSLDRLPGEVALPADLCEGDVLIFDGMGAYSTATNTRFNGYGAHEIVTVRR 398

Query: 348 DGTI 351
            G  
Sbjct: 399 GGHR 402


>gi|119385052|ref|YP_916108.1| Orn/DAP/Arg decarboxylase 2 [Paracoccus denitrificans PD1222]
 gi|119374819|gb|ABL70412.1| Orn/DAP/Arg decarboxylase 2 [Paracoccus denitrificans PD1222]
          Length = 387

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 50/359 (13%), Positives = 107/359 (29%), Gaps = 21/359 (5%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEV 63
           P  +     L       L         +  A+K      +  TL+     G   +S YE+
Sbjct: 30  PVMVFAPSVLRAAAQRFLQGFPG---LVTYAVKSNPDEAVIRTLSAAGVKGFDVASPYEI 86

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIGLR 121
            L           Y+   +     A            ++ S+L+K   +    + +I  R
Sbjct: 87  DLIGRLAPDAARHYHNPVRSQAEIAHAVEAGIKSWSVDSRSELDKLFVRVPAENCEISPR 146

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
               V  + +           L  +    + ++   +  L FH   +      + + +  
Sbjct: 147 FKLPVLGAAYDFGSKFGASPELAAELLRAV-ADRGYIPSLTFHPGTQCTDPHAWESYITT 205

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKYS----VQIYLEPG 234
             +       +   +++GGG         +  +    Q ++  +++       Q+  EPG
Sbjct: 206 AAEICAMAGVKARRLNVGGGFPSHRVTGVEPDLTAIFQLIRRVTDEAFGTDAPQLVCEPG 265

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG------PY 288
             +  +   L T V  + +     +             +   +   +    G      P 
Sbjct: 266 RGLCADAFALITRVKAVRDGQNVFLNDGVYGGLFELPIVGNLDRLQVLTPEGTPREDEPM 325

Query: 289 TAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
             ++ G +C + D   GE      ++ GD + F     Y+      FNG  +      N
Sbjct: 326 PRIIFGPTCDSVDRLPGELTLPANIQEGDYVIFHGAGAYSTVTNTRFNGFGLMAHLTVN 384


>gi|52352395|gb|AAU43684.1| lysine/ornithine decarboxylase [uncultured archaeon GZfos26D8]
          Length = 425

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 54/347 (15%), Positives = 127/347 (36%), Gaps = 21/347 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KTP+++  K++                 K+   +K      +   ++          +Y 
Sbjct: 81  KTPFFIFRKEEFRKLFKHFSQF-----GKVFYPVKANDHIEVLKAVDALSGCFEVDGIYH 135

Query: 63  VMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +          E   +++     +    A+    +  I +T  +  K +   + +   I 
Sbjct: 136 IERLLSIGVSPEKLQFSIPIKKPNGVKKALKYGVNRFIIDTEEEYLKIRQNRKNIQFIIR 195

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           + I   +   K +         +   +  + IE++  +  G+ F+ + E  ++  FS +L
Sbjct: 196 VSI-ADILNIKEVCYHKWGIPIKKAIELANIIENDGSHFLGISFYLSQEIFNYENFSTVL 254

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
             I K F      +  + +GGG+   D  +      +  +         I +EPG  ++ 
Sbjct: 255 DCIAKNFK--GRSLSVLDIGGGL---DDSFSSNFHNKIKEIKESLNIDTIIVEPGRNLLD 309

Query: 240 NTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATI------YPNTGPYTAMV 292
               +  +V+  ++        +D+ + + + DY++  +   I       P++  Y  ++
Sbjct: 310 PCIDMVVSVIGTAKRGDNMWAYIDAGIYSGLLDYVIKDKVFEISILDRTEPSSKTYKYLL 369

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
            G +  A D  GE+ F+K +  GD++  ++   Y       F G N 
Sbjct: 370 SGPTSDALDFLGEYSFKKQLNAGDKLIIKNCGAYTFVLGTHFGGFNH 416


>gi|325970205|ref|YP_004246396.1| diaminopimelate decarboxylase [Spirochaeta sp. Buddy]
 gi|324025443|gb|ADY12202.1| Diaminopimelate decarboxylase [Spirochaeta sp. Buddy]
          Length = 400

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 46/382 (12%), Positives = 110/382 (28%), Gaps = 27/382 (7%)

Query: 6   YYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           +YL+D  +   N                +  + K      +   +N         S  E+
Sbjct: 17  FYLVDSARFRENFRELRDAFSLIYPKFNIAYSYKTNYTPKLCKIVNDLGGYAEVVSDMEM 76

Query: 64  MLGHE-KFGGETHAYNVAYKDCEIDAVLSN-CDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            +        E   +N   K+             +  +++ ++   K  A K  +K    
Sbjct: 77  EIALRVGVKPEKIIWNGPIKNYSKVEGFLLAGGKVNLDSLYEVPLIKTIADKHPEKKIQI 136

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
                      +           +  +    ++I+N++      +   +    +    + 
Sbjct: 137 GIRVNFEINDGVISRFGFDVDSDDFKEALALTKIQNIHLYGMQCHFATRKLETWKPRAEG 196

Query: 182 IEKEFGHFITQIEWISLGGGIHFTD----------KDYPVKDFCQRLKEFSEKYS----V 227
           + +         E + LGGG+                    ++   +     +       
Sbjct: 197 MIRLLDSLNIIPEIVDLGGGLFGKMADSLKSQFDSDIPTYNEYAAEIAPLFAERYGNDGP 256

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA-----TIY 282
            + LEPG A+V +     TTV +I       +        ++   L  +           
Sbjct: 257 MLILEPGSALVGDCMQFATTVENIKNIRGKAIATVLGSIYNINPTLNKKNPPLEVVSCGI 316

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
                      G +C+  D     +    + +GD + F +   Y+I  K  F   N P  
Sbjct: 317 VQEFFQDLDFGGFTCIESDYIYRHYQ-GNIAVGDMVIFGNAGSYSIVLKPPFILPNFP-- 373

Query: 343 AVKNVDGTIKAIRE-FSYNDYY 363
            +   +  ++ ++   +++D +
Sbjct: 374 VLDISEAEVEILKRGEAFDDLF 395


>gi|289629083|ref|ZP_06462037.1| ornithine decarboxylase, putative [Pseudomonas syringae pv. aesculi
           str. NCPPB3681]
 gi|289649702|ref|ZP_06481045.1| ornithine decarboxylase, putative [Pseudomonas syringae pv. aesculi
           str. 2250]
 gi|330867051|gb|EGH01760.1| ornithine decarboxylase [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 371

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 51/352 (14%), Positives = 106/352 (30%), Gaps = 26/352 (7%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVM 64
           +Y +D + +  N              +L A+K      + + L+Q        +SL EV 
Sbjct: 16  FYTVDPRWITRNAQQFSGCFPGT---VLYAMKANPLEQVLEALSQGGINHFDVASLAEVQ 72

Query: 65  LGHEKFGGETHAYNVAYKDCEI---DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
             H              K               + + ++  +L+K +D   +    I L 
Sbjct: 73  TVHNTLPNAVQYLMNPVKSRHCLHEAYYRYGVRSFVLDSEEELSKLRDVLPERDSTISLF 132

Query: 122 INPSVSYSKFIL--ADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +  + S S  +            L  +   ++ S      GL FH   +      + A L
Sbjct: 133 VRYAPSESTAVYDLRGKFGASPVLATQLVHQVASSTDWSLGLSFHVGSQALEDGPWLAAL 192

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF------CQRLKEFSEKYSVQIYLEP 233
            + +         +  + +GGG      +            C  ++       + +  E 
Sbjct: 193 NDADAIVRDTAEHVRHLDIGGGFPGNYLNSMGNTPDLVGRVCDHIQTSPTLKDLNLICEA 252

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG------- 286
           G  +V    +L   VL   E         + +   +     + +        G       
Sbjct: 253 GRGLVYGGMSLFARVLSRREQSVFC---GAGIFGGLLSAQQWLQFPARVWRDGNPYTGAA 309

Query: 287 PYTAMVCGRSCLAGDIFG-EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
             T  + G +C + D     +     ++  D + F+    Y+++ +  FNG 
Sbjct: 310 ENTFNIFGPTCDSMDRLAFPYSLASDIRESDWLEFQSTGAYSVSLRTPFNGF 361


>gi|328955046|ref|YP_004372379.1| Orn/DAP/Arg decarboxylase 2 [Coriobacterium glomerans PW2]
 gi|328455370|gb|AEB06564.1| Orn/DAP/Arg decarboxylase 2 [Coriobacterium glomerans PW2]
          Length = 404

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 61/381 (16%), Positives = 111/381 (29%), Gaps = 38/381 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D+  L   +D       +  V L  A+K      +   L   ++     S  E
Sbjct: 14  GTPLYIFDEAVLAARVDALRRALPDV-VDLCYAVKANTF--IVPGLAGSVERFEVCSPGE 70

Query: 63  VMLGHE-KFGGETHAYNVAYKD----CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
           + +             +  YKD        A  +    +   + SQL    D A     +
Sbjct: 71  LAICEAVGAPASDMVISGVYKDAATVEHALAGPAMPAALTVESSSQLELIADAAAAAGVR 130

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
             + +                  S +        E E   + G+ F +  +  S      
Sbjct: 131 APVLLRL------TSGNQFGLDRSEILRAVDRFAEDERVELLGIQFFSGTQKTSLRRIGR 184

Query: 178 MLK----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY--- 230
            L      + +           +  G G+  +  +    D    L E  +      +   
Sbjct: 185 ELDRLDRLVAELVDEHGWAPGELEYGPGLPVSYFEADRFDETALLAELGDMLRGMAFGGR 244

Query: 231 --LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN---- 284
             LE G +I  +  T  T+V+D   N      +       +         A   P     
Sbjct: 245 ITLEIGRSIAASCGTYLTSVVDTKVNASQRYAIVDGGMHQL--VYYGHSMAMRQPPVRLL 302

Query: 285 --------TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFN 335
                          +CG  C   DI  +    + + +G  ++FE    Y +    + F 
Sbjct: 303 GAAGSSGAEQAQPWNICGALCTINDILAKQLPVEGLDVGRVLAFETAGAYCVTEGMSLFL 362

Query: 336 GINMPTIAVKNVDGTIKAIRE 356
             ++P + +  VDG  +  RE
Sbjct: 363 SRDLPAVVLLGVDGAPRLARE 383


>gi|330813289|ref|YP_004357528.1| ornithine decarboxylase / Arginine decarboxylase [Candidatus
           Pelagibacter sp. IMCC9063]
 gi|327486384|gb|AEA80789.1| ornithine decarboxylase / Arginine decarboxylase [Candidatus
           Pelagibacter sp. IMCC9063]
          Length = 394

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/352 (15%), Positives = 112/352 (31%), Gaps = 27/352 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFD-TLNQYMDGTTSSSLYEV 63
           P Y I +  +  +              +L A+K      +    L   +    ++++ E+
Sbjct: 19  PVYCIREDSIETSAAWFKNNFPGN---ILYAVKANPNEKVLKTLLKNNITDFDTATIEEI 75

Query: 64  MLGHEKFGGETHAYNV---AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-KIG 119
            L  +        +     + +         N      ++  +L+K      +     + 
Sbjct: 76  RLIKKIAPQAKTYFMHTIKSKESISEAYFKYNVKDFSLDSKDELDKILKATNQAKDLTLY 135

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           LRI  S  +++  L+               +I+     + G+ FH   +    + +S  L
Sbjct: 136 LRIQASNEHAEIDLSKKFGATVYESSSLLRQIKEVANKI-GISFHVGSQCMHPISYSKAL 194

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-------KYSVQIYLE 232
           K++         +   I++GGG   T  D   +     + E  +       K    +  E
Sbjct: 195 KDVSSLIKKTGIEPNIINVGGGFPTTYPDMYPQPLINYINEIKKSFAKLNLKSKPALLCE 254

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI-------YPNT 285
           PG A+V  +    +TV+ +    K  + ++      + D    Q                
Sbjct: 255 PGRALVAESG---STVVRVELRKKQNLYINDGTYGSLFDAGTPQFIFPTKPIQLKKTFTK 311

Query: 286 GPYTAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                   G +C   D   G F     +K GD I    +  Y ++ +  FNG
Sbjct: 312 RLVPYSFYGPTCDGIDFMKGPFMLPSNIKQGDYIEIGQLGAYGLSLRTKFNG 363


>gi|253741439|gb|EES98309.1| Ornithine decarboxylase [Giardia intestinalis ATCC 50581]
          Length = 448

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 55/406 (13%), Positives = 104/406 (25%), Gaps = 71/406 (17%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67
           +++  ++               V++  A+KC     +  ++     G   +S  EV    
Sbjct: 41  VLNVSEIERYYKLWKTHLPE--VQVRYAIKCNMHPLLLRSMYLLGAGFDCASPAEVRAAL 98

Query: 68  E-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSV 126
                     Y    K  +        +   F   S+             K G  +   +
Sbjct: 99  ATGCPPSKIIYANPQKPKQSIVEAFRLNCNTFTFDSEHELLSMLENTPPGKAGRFVLRLL 158

Query: 127 SYSKFILADPNR-PFSRLGEKCKDKIESEIK---NVNGLMFHNNCENKSFLCFS---AML 179
              +          F     +C   I        N+ G  FH      S   F      +
Sbjct: 159 PPDESSSICRFGVKFGASPSECYRLIRLCKHLGANLVGFSFHVGSGCGSADSFRLAVRYM 218

Query: 180 KNIEKEFGHFITQIEWISLGGGI--------------HFTDKDYPVKDFCQRLKEFSEKY 225
               K        +  +++GGG               H        ++    L+E  +K 
Sbjct: 219 GEAAKFAREQGFTLTVMNIGGGYMSRGAERHYDEPNQHANISPPSFEEVASALREEIDKI 278

Query: 226 SV---------QIYLEPGEAIVTNTTTLNTTVLDISE----------------------- 253
            V         +I  EPG     +  TL T +                            
Sbjct: 279 KVYFTSKSEDLEIMAEPGRFFAGDIMTLGTRIYGRRIIFDKIEDDNYLTEKEIIESGKAS 338

Query: 254 ------------NIKNLVIVDSSVEAHVPDYLLY---QESATIYPNTGPYTAMVCGRSCL 298
                             I+   V  H+     Y   +E +     +   T+ + G +C 
Sbjct: 339 INEVKYYVGDGVYGYYNAILFDHVVPHLRFTDKYGDSKEHSGTCMGSSLNTSSIFGPTCD 398

Query: 299 AGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344
           + D   +      +++GD +  +    Y       FNGI   ++  
Sbjct: 399 SLDCILKERKLPLLEVGDWVITDAFGAYTYAAATEFNGIPHVSVVC 444


>gi|330891534|gb|EGH24195.1| ornithine decarboxylase [Pseudomonas syringae pv. mori str. 301020]
          Length = 371

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 54/351 (15%), Positives = 108/351 (30%), Gaps = 24/351 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVM 64
           +Y +D + +  N              +L A+K      + + L+Q        +SL EV 
Sbjct: 16  FYTVDPRWITRNAQQFSGCFPGT---VLYAMKANPLEQVLEALSQGGINHFDVASLAEVQ 72

Query: 65  LGHEKFGGETHAYNVAYKDCEI---DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
             H              K               + + ++  +L+K +D   +    I L 
Sbjct: 73  TVHNTLPDAVQYLMNPVKSRHCLHEAYYRYGVRSFVLDSEEELSKLRDVLPERDSTISLF 132

Query: 122 INPSVSYSKFIL--ADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +  + S S  +            L  +   ++ S      GL FH   +      + A L
Sbjct: 133 VRYAPSESTAVYDLRGKFGASPVLATQLVHQVASSTDWSLGLSFHVGSQALEDGPWLAAL 192

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF------CQRLKEFSEKYSVQIYLEP 233
            + +         +  + +GGG      +            C  ++       + +  E 
Sbjct: 193 NDADAIVRDTAEHVRHLDIGGGFPGNYLNSMGNTPDLVGRVCDHIQTSPTLKDLNLICEA 252

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT---- 289
           G  +V    +L   VL   E               +      Q  A ++ +  PYT    
Sbjct: 253 GRGLVYGGMSLFARVLSRREQSVFCG--AGIFGGLLSAQQWLQFPARVWRDGTPYTGAAE 310

Query: 290 --AMVCGRSCLAGDIFG-EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
               + G +C + D     +     ++  D + F+    Y+++ +  FNG 
Sbjct: 311 NTFNIFGPTCDSMDRLAFPYSLASDIRESDWLEFQSTGAYSVSLRTPFNGF 361


>gi|157108351|ref|XP_001650188.1| ornithine decarboxylase [Aedes aegypti]
 gi|108868550|gb|EAT32775.1| ornithine decarboxylase [Aedes aegypti]
          Length = 415

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 51/356 (14%), Positives = 93/356 (26%), Gaps = 26/356 (7%)

Query: 23  YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAY 81
                  V+   A+K      + +T      G   +S  E+      +   E   +    
Sbjct: 43  DTLHLPRVRPFYAIKSNDEPSIVETTILLGCGYDCASTGELKRILGFRVEPERIMFGQPM 102

Query: 82  KDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF 140
           K  E   +        +F++  +L K      +    I  R+  +       +       
Sbjct: 103 KTIESLELAKKMKLRTVFDSEDELRKIHQHYPEADVVIRFRLETAEDPMNLGIKFGCEAD 162

Query: 141 SRLGEKCKDKIESEIKNVNGLMFHNN---CENKSFLCFSAMLKNIEKEFGHFITQIEWIS 197
               E   D  +    NV G  F+        K+F       K +         +   I 
Sbjct: 163 VEARELL-DLAKELGINVIGWCFNLGHACINPKNFYIGIKKGKELTDYAESLGFKFNLID 221

Query: 198 LGGGIHFTD----KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT-----LNTTV 248
           LGGG         + Y  +      + F  +    I  EPG        T          
Sbjct: 222 LGGGFSGDKDVSIEQYAEQINKGLDEFFPAELGYTIVAEPGRYYSAAAVTAVVPIHGKRF 281

Query: 249 LDISENIKNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTA------MVCGRSCL 298
           +   +N  ++  V       +       +             P          + G +C 
Sbjct: 282 IRSKDNPNDIEKVFYYFNDGIYGTFYSAKYRGKAVKPIVWKQPSECGPTRKTTLYGPTCD 341

Query: 299 AGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP-TIAVKNVDGTIKA 353
             D F +      + + D + FE+   Y+      FNG + P  +           
Sbjct: 342 GIDFFAKDIEIPELNVADFVVFENQGAYSRVHACRFNGFSPPKPVIFVRQSVWALL 397


>gi|126322169|ref|XP_001369332.1| PREDICTED: similar to Antizyme inhibitor 1 [Monodelphis domestica]
          Length = 449

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/371 (15%), Positives = 114/371 (30%), Gaps = 31/371 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  K++        +     +K    +KC +A  + + L     G   SS  E+ L
Sbjct: 40  FFVGDLGKIVKKHSQWQNVVAQ--IKPFYTVKCNSAPAVLEILAALGTGFACSSKNEMAL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             E     E        K        +     I +  +++   K      + K+ L I  
Sbjct: 98  VQELGVSPENIIDISPCKQSSQIKYAAKTGVNIMSCDNEIELKKIARNHPNAKLLLHIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
                            +      +  +     + G+ FH +   K    +   L +   
Sbjct: 158 EDISGDEESNMKFGTTLKNCRHLLECAKELDVQIVGVKFHVSSSCKEPQVYIHALSDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQ---RLKEFSEKYSVQIYLEPGEAIV 238
            F   G F  ++  + +GGG   ++      +          F E   +++  EPG   V
Sbjct: 218 VFDMAGEFGFKMTILDIGGGFTGSEFQLQEVNHVISPLLDVYFPEGSGIKVISEPGSYYV 277

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY---------------------QE 277
           ++  TL   ++       ++V              +Y                      E
Sbjct: 278 SSAFTLAVNIIAKKVVENDVVSSGVGKTGSNEPAFMYYMNDGVYGSFASKLSENLNTIPE 337

Query: 278 SATIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
               Y    P +T+ + G SC   D   E      + +GD + F+++    ++  + FN 
Sbjct: 338 VHKKYKKDAPLFTSSLWGPSCDELDQIVENCLLPELNVGDWLIFDNMGADTLHEPSAFND 397

Query: 337 INMPTIAVKNV 347
              PTI     
Sbjct: 398 FQRPTIYYMMS 408


>gi|291522187|emb|CBK80480.1| Diaminopimelate decarboxylase [Coprococcus catus GD/7]
          Length = 395

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 61/375 (16%), Positives = 115/375 (30%), Gaps = 31/375 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP ++ D   L   +           V L  A+K      +   L   ++     S  E
Sbjct: 15  QTPMHIFDMAILKKRVAFLKSHLPE-KVSLCYAVKANTF--IIKELCGQVERFEVCSPGE 71

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLS----NCDTIIFNTVSQLNKFKDKAQKLHKK 117
           + +    +        +  YK   +   L     +       ++ Q       A++   K
Sbjct: 72  LAICRRLQIPMRQVVLSGVYKTPAVMEALFRDGVDIGIFTAESMEQYLLLAGLAERYTMK 131

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
           I L +                  + L +  +    +E   V G+ F +  +  S      
Sbjct: 132 IRLLLRL------TSGNQFGMDENVLIQTIRMSRSNEWVEVEGIQFFSGTQKTSVKKLRR 185

Query: 178 MLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI---- 229
            L  ++            +++ +  G G+          D    L EFSE  S       
Sbjct: 186 ELTYVDAFIQRLETEEGFRVKELEFGPGLPVFYFQGDDFDEVSFLAEFSEMLSEMTSQVK 245

Query: 230 -YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-----PDYLLYQESATIYP 283
              E G +I  +     T+V+D   N K    +       +        + +     +  
Sbjct: 246 LTFELGRSIAASCGNYMTSVVDAKVNKKQNYAIVDGGIHQLVYYGQSMAMKHPYCHVLPE 305

Query: 284 NTGPYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGINMP 340
                T    + G  C   DI  +    + + +GD I FE+   Y+       F   ++P
Sbjct: 306 KQEGETMDWNLFGSLCTVNDILVKQMPVRNLTVGDVIVFENTGAYSTTEGIALFLSRDLP 365

Query: 341 TIAVKNVDGTIKAIR 355
            I ++  DG I  +R
Sbjct: 366 KILLRKEDGEIHVLR 380


>gi|155370410|ref|YP_001425944.1| hypothetical protein FR483_N312L [Paramecium bursaria Chlorella
           virus FR483]
 gi|155123730|gb|ABT15597.1| hypothetical protein FR483_N312L [Paramecium bursaria Chlorella
           virus FR483]
          Length = 372

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 52/351 (14%), Positives = 115/351 (32%), Gaps = 24/351 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D + + +       I     V+   A+KC     +   L         +S  E+  
Sbjct: 19  FYVSDPKFVEHLTSVWSDIFPL--VQPFYAVKCNNDKVLLKVLADNGVNFDCASKNEITQ 76

Query: 66  GHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
             +         +    K  +    A  +  + + F++  +L+K K+   +    + +R 
Sbjct: 77  VLKLGVDPSRIIFAHTVKSPDSIIFAKQAGVNLMTFDSSFELDKIKNYHPEAKMVLRIRC 136

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           +   +  K              E   +  +     V G+ FH    +++   +   LK+ 
Sbjct: 137 DDPHALVKLEKYGALSNEI---ETLLEHAKKLHITVYGISFHVGSGSRNPDAYWKALKSA 193

Query: 183 EKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEP 233
            + +        ++  I +GGG++   +D      C        +K+F     V+   EP
Sbjct: 194 REAYDIATAMGHEVGIIDIGGGMYADIEDNGTVSTCVAEYVRDGIKDFFSDTDVKFIAEP 253

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT-------IYPNTG 286
           G     + + L   V+             +         ++Y+++         +  N  
Sbjct: 254 GRFFAQHYSVLACQVVGKRVRDGYYEYFVNESTYGGFSNVIYEKAVPEPIIVKDVGENDE 313

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
            + +++ G +C   D+  +      + I D I F     Y       FNG 
Sbjct: 314 KHMSVIYGCTCDGVDVINKQTHIPELNIDDWIYFPMWGAYTNCLVTSFNGF 364


>gi|301630922|ref|XP_002944564.1| PREDICTED: diaminopimelate decarboxylase-like, partial [Xenopus
           (Silurana) tropicalis]
          Length = 214

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 61/192 (31%), Gaps = 11/192 (5%)

Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS------VQIYLEPGEAI 237
                    I  I  GGG+                ++  ++          + +EPG ++
Sbjct: 19  HGIEAAGIAIHHIDFGGGLGIAYNGETPPAADALWRQLLDRLDARGYGDRALMIEPGRSL 78

Query: 238 VTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTGP---YTAMVC 293
           V N     T VL +    +    + D+++       +       +  +  P    T  V 
Sbjct: 79  VGNAGVCLTEVLYLKPGEQKNFCIVDAAMNDLPRPAMYEAFHGIVPLHARPGASTTYDVV 138

Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353
           G  C +GD  G       V+ GD ++      Y  +  + +N        + +    +  
Sbjct: 139 GPVCESGDWLGHERALA-VQSGDLLAVLSAGAYCASMASSYNTRGRAAEILVDGSQAVLI 197

Query: 354 IREFSYNDYYNN 365
            R  S  D ++N
Sbjct: 198 RRRESVTDIFSN 209


>gi|218134538|ref|ZP_03463342.1| hypothetical protein BACPEC_02441 [Bacteroides pectinophilus ATCC
           43243]
 gi|217989923|gb|EEC55934.1| hypothetical protein BACPEC_02441 [Bacteroides pectinophilus ATCC
           43243]
          Length = 376

 Score =  127 bits (318), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 65/372 (17%), Positives = 129/372 (34%), Gaps = 34/372 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAG---VKLLLALKCFAAWGMFDTL-NQYMDGTTSSS 59
           TP Y I       N    +   + A    V+   ++K     G+      +      + S
Sbjct: 3   TPCYTIHLDIFEKNCREVMDAFEEAWGGRVEYGYSVKTNHDAGLMKYAHAKLGWFIETVS 62

Query: 60  LYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK-- 116
             E+ L     F  E   +N   K    DA+++      +  +  L+      + +    
Sbjct: 63  PDELELAFNLGFDAENIIFNGPCKCSRQDALINAIRGGAYVNLDNLDDVSFVCRHVSDVR 122

Query: 117 ---KIGLRINPSVSYSKFILADPNRPFSRLGEKCK--------DKIESEIKNVNGLMFHN 165
              +IG+R+N ++              SR G   +        D + S      GL  H 
Sbjct: 123 DASRIGIRVNYNLEAECPGETTAGESVSRFGIDVENKDFARAVDMLRSAGIEPAGLHMHT 182

Query: 166 NCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR-------L 218
           +  ++S   F+++ +   +    +  ++ ++ +GGG     K        Q        L
Sbjct: 183 STRSRSAAVFTSLARKAAQLVNDYGLKLHFVDMGGGYFGGQKVEGKPSMEQYAQVITREL 242

Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
           K+        + LEPG +++  + T  T+VL + +     ++       HV  ++ ++  
Sbjct: 243 KKALNPEMTTLILEPGASVIATSVTYETSVLSVRDIRGTKIVTMDGTLLHVNPFMAHRNQ 302

Query: 279 ATIYPNTGPYTAM-------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
                    Y A        +CG +C+  D F + H  + ++ GD +SF     Y +   
Sbjct: 303 PYSTSLIADYDARPVDEHQIICGCTCMENDRFADEHSVRRLEPGDVLSFRFAGAYTMAFN 362

Query: 332 NWFNGINMPTIA 343
           + F     P   
Sbjct: 363 SNFIVN--PAEV 372


>gi|312882026|ref|ZP_07741780.1| lysine/ornithine decarboxylase [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309370321|gb|EFP97819.1| lysine/ornithine decarboxylase [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 402

 Score =  127 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 51/366 (13%), Positives = 114/366 (31%), Gaps = 34/366 (9%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG- 66
           ++D + +                ++  A+K      +   L Q   G  ++S  E++   
Sbjct: 19  ILDIEGIRRQYTFLQDSL--PNTQIRFAIKACPNDEVLAALAQKGAGFDAASPNEIIAAI 76

Query: 67  HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSV 126
                 +   Y    K  E  ++        F T S+ + +       +  I  RI    
Sbjct: 77  KSGANLKNIHYGNTIKSNEQISLAFKLGIKDFVTDSKEDLYAVSEYAPNSNIFCRIATDG 136

Query: 127 SYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML---KNIE 183
           + + + L+           +     ++      G+  H   +      ++ +      + 
Sbjct: 137 NGAVWSLSKKFGCSINATVEILKLAKNIGLEPVGVSLHIGSQQLQVDAWNKVFSSLAELL 196

Query: 184 KEFGHFITQIEWISLGGGI--------HFTDKDYPVKDFCQRLKEFSEK------YSVQI 229
           K         ++I+LGGG+        H       +K   + +K+            +Q 
Sbjct: 197 KRLAKDNIYPKYINLGGGLPASGYLDKHGKVMHADIKKTLKTIKDGINHLGSLSLRPLQF 256

Query: 230 YLEPGEAIVTNTTTLNTTVLDISEN------IKNLVIVDSSVEAHVP--DYLLYQESATI 281
            +EPG  +V +   +   V+ ++         ++ + +       +   D L +      
Sbjct: 257 IIEPGRFMVADFGVIRAHVVRLTTREQLNGEKQHWLYLSVGRYNGLYELDALRFPILFPT 316

Query: 282 YPNTGPYTAMVCGRSCLAGDIF----GEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNG 336
             +     A V G +C + DI             +K GD +       Y  +  +  FNG
Sbjct: 317 VKSNQYVKAFVAGPTCDSDDILTSENAPISVPANLKAGDPVLILSTGAYTTSCSSVGFNG 376

Query: 337 I-NMPT 341
              +P+
Sbjct: 377 FLPLPS 382


>gi|289667147|ref|ZP_06488222.1| diaminopimelate decarboxylase [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 429

 Score =  127 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 48/354 (13%), Positives = 100/354 (28%), Gaps = 29/354 (8%)

Query: 21  ALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGGETHAY-NV 79
            +  +     +L  A K  A   +  TL  ++DG  ++S  E+   H +       +   
Sbjct: 41  WMRAQLPPQCELFYAAKANAEPPVLRTLAAHVDGFEAASGGELAWLHAQQPQAALLFGGP 100

Query: 80  AYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRINPS---VSYSKFILAD 135
              D E+    +  D  +   ++S+L +    A    + + + +  +          L  
Sbjct: 101 GKLDTELVQAAALPDCTVHVESLSELERLAAIAAHAGRCVSVFLRMNIAVPGAQSTRLMM 160

Query: 136 PNRP-----FSRLGEKCKDKIESEIK-NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHF 189
              P          +     +++     + G  FH     +       ++    +    +
Sbjct: 161 GGHPSPFGLDPCDLDTAMQLLQASPSLRLEGFHFHLMSHQRDAAAQLHLIAAYLRTVQQW 220

Query: 190 ITQ----IEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSVQIY--LEPGEAIVT 239
                     ++ GGG           +    FC  L     ++   ++  LEPG  +  
Sbjct: 221 RHTYALGPLRVNAGGGFGVDYLAPELSFDWAGFCAGLPALLHEHGTDLHLRLEPGRYVSA 280

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY-------TAMV 292
           +       VLD+  +      V      H                 G            +
Sbjct: 281 SCGWYLMEVLDLKRSHGAWFAVARGGTHHFRTPAAQAHDHPFRVLRGARAPVLRDTPVTL 340

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIAVK 345
            G+ C   D+         +  GD ++F     Y  N  +  F     P +   
Sbjct: 341 VGQLCTPKDVLARDQHVAVLAPGDCLAFPLAGAYAWNISHQHFLMHPAPQMVFL 394


>gi|84622901|ref|YP_450273.1| diaminopimelate decarboxylase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|84366841|dbj|BAE67999.1| diaminopimelate decarboxylase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 398

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 47/354 (13%), Positives = 100/354 (28%), Gaps = 29/354 (8%)

Query: 21  ALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGGETHAY-NV 79
            +  +  A  +L  A K  A   +  TL  ++DG  ++S  E+   H +       +   
Sbjct: 41  WMRAQLPAQCELFYAAKANAEPPILQTLAAHVDGFEAASGGELAWLHAQQPQAPLLFGGP 100

Query: 80  AYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNR 138
              + E+    +  D  +   ++S+L +    A    + + + +  +++           
Sbjct: 101 GKLNTELAQAAALPDCTVHVESLSELERLAAIAAHAGRCVPVFLRMNIAVPGAQSTRLTM 160

Query: 139 PFS--RLGEKCKDKIESEI-------KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHF 189
                  G    D   +           + G  FH     +       ++    +    +
Sbjct: 161 GGHPSPFGLDPDDLDAAMQLLQASPSLRLEGFHFHLMSHQRDAAAQLHLIAAYLRTVQLW 220

Query: 190 ITQ----IEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSV--QIYLEPGEAIVT 239
                     ++ GGG           +    FC  L     ++    ++ LEPG  +  
Sbjct: 221 RHTYALGPLRVNAGGGFGVDYLAPESSFDWAGFCAGLPALLGEHGTDLRLRLEPGRYVSA 280

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT-------AMV 292
           +       VLD+  +      +      H                 G  T         +
Sbjct: 281 SCGWYLMEVLDLKRSHGAWFAIARGGTHHFRTPAAQAHDHPFRVLRGARTPVLRDTPVTL 340

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIAVK 345
            G+ C   D+         +  GD ++F     Y     +  F     P +   
Sbjct: 341 VGQLCTPKDVLARDQSVAALAPGDCLAFPLAGAYAWTISHQHFLMHPAPQMVFL 394


>gi|126330252|ref|XP_001366814.1| PREDICTED: hypothetical protein isoform 2 [Monodelphis domestica]
          Length = 459

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 54/354 (15%), Positives = 113/354 (31%), Gaps = 34/354 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++       +++    V+    +KC ++ G+   L +   G + ++  E+ L
Sbjct: 41  FFVADLGDVVK--KHLRFLKNLPRVRPFYVVKCNSSPGVLRALAELGLGFSCANKAEMEL 98

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       Y    K        +     + +  +++   K        ++ LRI  
Sbjct: 99  LRHIGVPAHKIIYTSPCKQAAQVKQAARLGIRMLSFDNEVELAKVARSHPTARMVLRIAT 158

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN----KSFLCFSAMLK 180
             S S   L+       +      +  +     V G+ FH         ++F    A  +
Sbjct: 159 DDSCSPARLSMKLGATLKSCRHLLETAKKMNMEVVGVSFHVGSGCSSDPQAFTQSIADAR 218

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
            + +       ++  + LGGG   T+      ++            F E   V I  EPG
Sbjct: 219 LVFEMGTELGYRMHILDLGGGFPGTEDSKVRFEEMASVINSALDMYFPEGCGVDILAEPG 278

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-------HVPD--------YLLYQESA 279
              V +  TL   ++   E   +   +D    A       H+ +                
Sbjct: 279 RYYVASAFTLAVRIVAKKEVPSDQTGLDEEDGASPKSIVYHISEGVYGAFNCVFFDNACP 338

Query: 280 TIYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
                  P      Y++ + G +C   D   E      +++GD + FE++  Y 
Sbjct: 339 MPILQKKPSPDQRVYSSSLWGPTCDDLDHVAEGLCLPELQLGDWLIFENMGAYT 392


>gi|57095270|ref|XP_532293.1| PREDICTED: similar to ornithine decarboxylase antizyme inhibitor
           isoform 1 [Canis familiaris]
 gi|73974224|ref|XP_849306.1| PREDICTED: similar to ornithine decarboxylase antizyme inhibitor
           isoform 2 [Canis familiaris]
 gi|73974226|ref|XP_858461.1| PREDICTED: similar to ornithine decarboxylase antizyme inhibitor
           isoform 4 [Canis familiaris]
          Length = 447

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 56/371 (15%), Positives = 108/371 (29%), Gaps = 31/371 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  K++        I     +K    +KC +   + + L     G   SS  E+ L
Sbjct: 40  FFVGDLGKIVKKHSQWQNIVAQ--IKPFYTVKCNSTPAVLEILAALGTGFACSSKTEMAL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             E     E   Y    K        +          +++   K      + K+ L I  
Sbjct: 98  VQELGVSPENIIYISPCKQVSQIKYAAKIGVNTMTCDNEVELKKIARNHPNAKVLLHIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             +              +      +  +     + G+ FH +   K    +   L +   
Sbjct: 158 EDNIGGEEGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARC 217

Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238
            F   G F   +  + +GGG      +   V      L    F E   ++I  EPG   V
Sbjct: 218 VFDMAGEFGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDVYFPEGSGIKIISEPGSYYV 277

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE--------------------- 277
           ++  TL   ++       +                +Y                       
Sbjct: 278 SSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGIYGSFASKLSEDLNTIPE 337

Query: 278 -SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                  +   +T+ + G SC   D   E      + +GD + F+++   +++  + FN 
Sbjct: 338 VHKKYKKDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSLHEPSAFND 397

Query: 337 INMPTIAVKNV 347
              P I     
Sbjct: 398 FQRPAIYYMMS 408


>gi|164663157|ref|XP_001732700.1| hypothetical protein MGL_0475 [Malassezia globosa CBS 7966]
 gi|159106603|gb|EDP45486.1| hypothetical protein MGL_0475 [Malassezia globosa CBS 7966]
          Length = 493

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 50/399 (12%), Positives = 109/399 (27%), Gaps = 68/399 (17%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +           +   +    A+KC     +   L     G   +S  E+  
Sbjct: 66  FYVADLATIYRQYVRWRR--ELPRIIPFYAVKCNPEPIVLHLLAALGLGFDCASNGEIQT 123

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             +         Y    K        +  +  +    +    +K K      K+ +RI  
Sbjct: 124 ILDMGVSPSRIIYANPCKASSFVRRAAAQNICLTTFDNVDELYKMKRFHPESKLVVRILT 183

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S S   L            +   K      +V G+ FH          +   L    +
Sbjct: 184 DDSKSVCQLGIKFGAPLADVPRLLSKARELDLDVVGVSFHVGSGCFDPEAYRDALYRSRQ 243

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-------------- 227
            F     +    + + +GGG     + +  +   + ++   + Y                
Sbjct: 244 AFDMGREYGYTFDLLDIGGGF----EHHNFEAIAKVVRSALDDYFPDEAFAPGGSRMTER 299

Query: 228 ----QIYLEPGEAIVTNTTTLNTTVLDISENIKNL-----VIVDSSVEAHVPDYLLYQE- 277
               ++  EPG   V    +L T ++   ++ ++             +   P  + YQ  
Sbjct: 300 PKGLRVIAEPGRYFVYRAFSLATNIIARRQSEEDNSDAVRQDGQGGADDGRPKAMYYQND 359

Query: 278 ----------------SATIYPNTGPY-----------------TAMVCGRSCLAGDIFG 304
                              +      +                    V G +C + D   
Sbjct: 360 GTYGAFNCILFDHQQVHPKVLSMQRDFVYERESSVPELAQDQWRPCSVWGPTCDSMDCIM 419

Query: 305 EF-HFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
                 + + +GD + +E++  Y +   + FNG+    +
Sbjct: 420 RQTRLPRALDVGDWLVYENMGAYTLCASSTFNGLARAQV 458


>gi|227500436|ref|ZP_03930498.1| diaminopimelate decarboxylase [Anaerococcus tetradius ATCC 35098]
 gi|227217499|gb|EEI82818.1| diaminopimelate decarboxylase [Anaerococcus tetradius ATCC 35098]
          Length = 392

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 68/380 (17%), Positives = 137/380 (36%), Gaps = 20/380 (5%)

Query: 4   TPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           TPY++I + KL  N++        +    +L  ++K  +   + + +          S  
Sbjct: 10  TPYFIIYQDKLDKNIEDYKTALINEWPNSQLSFSVKTNSLPWLLEYIRDKGIFAEVVSKE 69

Query: 62  EVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E +L         E                L+   T+  ++  +LN      ++    IG
Sbjct: 70  EYLLAKRCGYKDNEIIFNGPIKNKDIFLDSLTMGATVNIDSKEELNFLFGLNEQSRNNIG 129

Query: 120 LRINPSVSYSKFILADPNRPFSRLGE-----KCKDKIESEI--KNVNGLMFHNNCENKSF 172
           +RINP+    +           R G      +    I       +  GL  H N   +S 
Sbjct: 130 IRINPNPDIFEEKDIAYKNDGFRFGFSEETGELNRAISIVRGASDSVGLHIHCNSITRSK 189

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEFSEKYSV 227
             + A+    +K    +  ++ +I +GGG              +      L +  +    
Sbjct: 190 EVYIALANYAKKIIKKYDLKVSYIDIGGGFFGGIPGKTTAREYISVIKNVLSKVVDINVT 249

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287
           ++ +EPG AI+ +   L T V+D+ E  ++ ++       H+      +       N   
Sbjct: 250 KLIIEPGSAIIGSCVDLVTKVIDVKETCRSRIVTTDGSRIHIDPLWAKKSYVYTLENKSD 309

Query: 288 Y---TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344
                 ++CG +C+  D     + +K ++ GD+I +  V  Y++     F     P + +
Sbjct: 310 SNITKQIICGYTCMDHDRLMTIYNDKKLECGDKIIYHRVGAYSVTFGGMFISY-YPDVYI 368

Query: 345 KNVDGTIKAIREFSYNDYYN 364
           K  +   K   + S +D+YN
Sbjct: 369 KKSENIEKVRGKISVDDFYN 388


>gi|302544845|ref|ZP_07297187.1| orn/DAP/Arg decarboxylase, family 2 [Streptomyces hygroscopicus
           ATCC 53653]
 gi|302462463|gb|EFL25556.1| orn/DAP/Arg decarboxylase, family 2 [Streptomyces himastatinicus
           ATCC 53653]
          Length = 434

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 54/382 (14%), Positives = 109/382 (28%), Gaps = 41/382 (10%)

Query: 24  IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAY-NVAY 81
           +     V    A+K  +   +   L     G   +S  E+ L        +     + A 
Sbjct: 40  VAPGTPVLHAFAVKAASLVPVLRLLTDEGLGCEVASPGELALARAAGTDTDRIVLDSPAK 99

Query: 82  KDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKIGLRINPSVSYSKFILADPNRP 139
              E+   L     +  +   +L +             +GLR+NP V             
Sbjct: 100 TPAELREALDLGIALNADNPQELARLDALVAGTPTRSPLGLRVNPQVGGGSIGALSTATE 159

Query: 140 FSRLGEKCKDK--------IESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFI- 190
            S+ G   +D           +E   +  L  H   +       +A ++   +       
Sbjct: 160 TSKFGVALRDVGARDWVVRAFAERPWLTRLHAHVGSQGCPLDLMAAGVQAAYELAEEINE 219

Query: 191 ----TQIEWISLGGGIHFT----DKDYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVT 239
                QI+ + +GGG+       +     +++ Q LK            +  E G +++ 
Sbjct: 220 TIGRRQIDTLDIGGGLPVNFTSDEVTPSYREYTQLLKTTVPGLLDGRYGLVTEFGRSLLA 279

Query: 240 NTTTLNTTVLD------ISENIKNLVIVDSSVEAHVPDYLLYQE-------SATIYPNTG 286
            +  +   V            + +     ++     P     +                G
Sbjct: 280 KSGVVLARVEYAKSAGGRPIAVTHAGAQLATRTVFAPTAWPLRIAPYDADGRPKPTGPAG 339

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
           P T  + G  C AGD+  E      +  GD +   D   Y  +    +N +  P +    
Sbjct: 340 PVTQDIAGPCCFAGDLVAENRALPELTAGDLVGLLDTGAYYFSNHFAYNSLPRPGVYGFA 399

Query: 347 VDGT----IKAIREFSYNDYYN 364
            DG      +  +  +  +   
Sbjct: 400 PDGDGIRFAEVRKPQTVAEIVA 421


>gi|194207728|ref|XP_001499776.2| PREDICTED: similar to arginine decarboxylase [Equus caballus]
          Length = 505

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 50/358 (13%), Positives = 111/358 (31%), Gaps = 33/358 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++       +++    V+   A+KC ++ G+   L +   G + ++  E+ L
Sbjct: 41  FFVADLGAVVR--KHFCFLKCLPRVRPFYAVKCNSSLGVLKVLAELGLGFSCANKAEMEL 98

Query: 66  G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       Y    K        +     + +  +++   K        ++ L I  
Sbjct: 99  VQRIGVPASKIIYANPCKQIAHIKYAAKHGVRLLSFDNEIELAKVVKSHPSARMVLCIAT 158

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S+S   L+       +      +  +     V G+ FH   +      ++  + +   
Sbjct: 159 DDSHSLSRLSFKFGASLKSCRHLLENAKKSHVEVVGVSFHIGSDCPDPQAYAQSIADARL 218

Query: 185 EF---GHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
            F        ++  + LGGG    +      ++            F E   V I  + G 
Sbjct: 219 VFEIGAELGHRMHILDLGGGFPGVEGTKVRFEEITSVINSALDLYFPEDCGVDILAKLGR 278

Query: 236 AIVTNTTTLNTTVLDISE---------------NIKNLVIVDSSVEAHVPDYLLYQESAT 280
             VT+  TL  +++   E                   +  +   V       L      T
Sbjct: 279 YYVTSAFTLAISIIAKKEVLLDQPSREEENSSAPKTIVYHLHEGVYGIFNSVLFDNTCPT 338

Query: 281 IYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                 P      Y++ + G +    D   E  +   + +GD + FE +  Y +   +
Sbjct: 339 PILQKKPSTEQPLYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFEHMGAYTVGMGS 396


>gi|304321189|ref|YP_003854832.1| diaminopimelate/ornithine decarboxylase [Parvularcula bermudensis
           HTCC2503]
 gi|303300091|gb|ADM09690.1| diaminopimelate/ornithine decarboxylase [Parvularcula bermudensis
           HTCC2503]
          Length = 392

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 48/335 (14%), Positives = 90/335 (26%), Gaps = 18/335 (5%)

Query: 19  DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSSLYEVMLGHEKFGGETHAY 77
             A +        +  A+K      + + L     D    +SL E+     +F   T A+
Sbjct: 30  RAARWFAAQFRGTVFYAVKANPDPIVLEALASGGVDRFDVASLAEIRAVRRQFPSSTLAF 89

Query: 78  NVAYKDCEID---AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILA 134
               K  E                +   +L+K    A K    + L +   V  S   L 
Sbjct: 90  MNPVKAPEAIAEAYFRHGVRIFALDRQEELDKIVT-ATKGAGDLTLIVRIGVDNSTADLK 148

Query: 135 DPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQ 192
              +  +R G    D I +   +    G+ FH   +N++   F   + ++  +       
Sbjct: 149 LGMKFGAR-GPAVADLIRTTRWHAEKLGVSFHIGSQNRAPEAFVQAMTSVAGQVQAAGVL 207

Query: 193 IEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDIS 252
           ++ + +GGG                ++     +                  L      + 
Sbjct: 208 LDILDVGGGFPAAYPGRDHAALSDYIEAIHRAFDRFPAFGRTALWAEPGRALVAEAASLI 267

Query: 253 ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY---------TAMVCGRSCLAGDIF 303
             ++     D  +   +   L                             G +C   D  
Sbjct: 268 VRVEGRRDFDLYINDGIYGALYDAGHLNWRFPCRAVGHPADAMTAPFRFYGPTCDDADYM 327

Query: 304 -GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
            G F     +  GD I    +  Y     + FNG 
Sbjct: 328 EGPFFLPAGMAQGDTIEIGQLGAYGRTMTSGFNGY 362


>gi|155371707|ref|YP_001427241.1| hypothetical protein ATCV1_Z760R [Acanthocystis turfacea Chlorella
           virus 1]
 gi|155125027|gb|ABT16894.1| hypothetical protein ATCV1_Z760R [Acanthocystis turfacea Chlorella
           virus 1]
          Length = 371

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 54/349 (15%), Positives = 107/349 (30%), Gaps = 20/349 (5%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D +     +D    +     V    A+KC     +   L +       +S  E+  
Sbjct: 18  FYVCDPKFAERLVDEWYRML--PSVHPFYAVKCNDDPVLLKYLEKNGVNFDCASKGEIAK 75

Query: 66  GH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       +    K  E      N    I    S     K K      +  LRI  
Sbjct: 76  VLNAGALPSRILFAHTIKSPEALLYAKNVGVNIATFDSTFELDKMKLYHPACEAVLRIRC 135

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
                  +  +     +       +  +    NV G+ FH    +++   +   LK+  +
Sbjct: 136 D-DPHALVKLEKYGANADEITPLLEHAKKIGMNVKGISFHVGSGSRNPDAYWKALKSARE 194

Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGE 235
            +         I  I +GGG++   +D      C        +K+F    +V+   EPG 
Sbjct: 195 AYDIAVSLGHSISIIDIGGGMYADIEDDGAITTCVADYILDGIKDFFSGINVEFIAEPGR 254

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT-------IYPNTGPY 288
               + + L   ++             +         ++Y+++         I  +   +
Sbjct: 255 FFAQHYSVLACQIVGKRIRDGFYEYFVNESTYGAFSNVIYEKAVPEPIPVRDIDEDELKH 314

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
            +++ G++C   D+  +      + I D I FE    Y       FN  
Sbjct: 315 ISVIYGQTCDGIDVINKQTHLPELHIDDWIYFERWGAYTRVLHTGFNSF 363


>gi|224368165|ref|YP_002602328.1| LysA2 [Desulfobacterium autotrophicum HRM2]
 gi|223690881|gb|ACN14164.1| LysA2 [Desulfobacterium autotrophicum HRM2]
          Length = 410

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 52/370 (14%), Positives = 109/370 (29%), Gaps = 28/370 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P YL+++  L           +          A+K      +   +     G   SS 
Sbjct: 42  GSPLYLVEEAVLRERAGQFRAAFERQLPSTSFYYAMKSNNLSDVSRIVLGEGFGLDVSSG 101

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTII--FNTVSQLNKFKDKAQKLHKKI 118
            E+         +         D E++  + N D +    ++  +  +     ++  K++
Sbjct: 102 IELSTALGLGATDIIFSGPGKTDPELELAVENADRVTVLMDSPGECQRLMALVERRKKRL 161

Query: 119 GLRINPSVSYSKFILADPNRPFSRLG--EKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
            + +  +               + L   E  KD      K V      N   ++      
Sbjct: 162 RVGLRLNHHTVGLWRKFGVPMEALLPLYETIKDHSYMAFKGVQFHSSWNLVPDRQVELIR 221

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGI---------------HFTDKDYPVKDFCQRLKEF 221
            +   ++K    F    E+I +GGG                H       ++ F Q L + 
Sbjct: 222 ILGDTLKKMPPSFFDDCEFIDIGGGYWPSQGEWLVSDDPLGHQMIPASSIETFAQTLGQV 281

Query: 222 SEKYS-----VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLY 275
             +        +I  EPG  I  +   +   V+D       +    ++       +   +
Sbjct: 282 IREKILSLGAFRICFEPGRWICNDAMHIIIQVIDKKAPDLVITDAGTNAVGWERFETDYF 341

Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                    T      V G  C   D++G  +F + ++  D +       Y  + +  F 
Sbjct: 342 PVINLTRSGTMEKPCHVLGSLCTPHDVWGYAYFGQEIREKDILMIPTQGAYTFSLRQEFI 401

Query: 336 GINMPTIAVK 345
              +P + V 
Sbjct: 402 -KPLPRVVVI 410


>gi|226943071|ref|YP_002798144.1| diaminopimelate decarboxylase [Azotobacter vinelandii DJ]
 gi|226717998|gb|ACO77169.1| diaminopimelate decarboxylase [Azotobacter vinelandii DJ]
          Length = 396

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 55/350 (15%), Positives = 101/350 (28%), Gaps = 30/350 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            Y+ D    L     AL     AG +L  A K      +  +L  ++DG  ++S  E+  
Sbjct: 26  AYVYDLPA-LARHARALRAALPAGCELFYAAKANPEAPILRSLAPWVDGFEAASGGELRW 84

Query: 66  GHEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDK--AQKLHKKIGLR 121
            HE    +   +    K     A   +C        ++ +L +      A      + LR
Sbjct: 85  LHECHPDKPLIFGGPGKLDSELAAAMDCGISAFHVESIGELRRLAVVAKAHGRPAPLLLR 144

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK---- 170
           +N  +  +           +  G   +   E            + GL FH          
Sbjct: 145 LNLKLDEAPDSRLVMGGKPTPFGLDEEALDEALALLAGEPWLELQGLHFHLLSHQLDSAA 204

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKEFSEKYS 226
                 +  +   +        ++ +++GGG+    +D    +    FC  L     +  
Sbjct: 205 HLQLMRSYFRCFRQLNARHGLDLKLLNVGGGMGIDYRDHARSFDWPGFCAGLAALIAEEG 264

Query: 227 V---QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY 282
           +   +I  E G  +          VLDI  N      V      H         +   + 
Sbjct: 265 MAGTRIRFEIGRFLAAACGYYLMEVLDIKRNHGQYFAVARGGTHHFRTPAAQGHDHPFVV 324

Query: 283 PNT------GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
                          + G+ C   D+         + +GD + F     Y
Sbjct: 325 LRGERPAELENQPVTLVGQLCTPKDVLARQQPVAALAVGDLLVFPLAGAY 374


>gi|167564952|ref|ZP_02357868.1| putative diaminopimelate decarboxylase [Burkholderia oklahomensis
           EO147]
          Length = 418

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 43/356 (12%), Positives = 106/356 (29%), Gaps = 23/356 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIR---KNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSL 60
           P +L D ++ ++N++         ++   ++  A+K      +   L +  + G  + S 
Sbjct: 49  PLFLYDPRRAVDNVERLRGALGGLQDGDFRIHYAMKANRFRPLLSELRRSPIFGVDACSP 108

Query: 61  YEVMLGHE-KFGGETHAYNV--AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E  +Y       D      +     +  +T+S +     ++      
Sbjct: 109 EELREALACGFAPERISYTAHGMMPDEAALLAVLPDVHVNCDTLSAIALLGSRSPGREIG 168

Query: 118 IGLRINPSVSYSKFILADPNRPF-SRLGEKCKD----KIESEIKNVNGLMFHNNCENKSF 172
           I +     + Y             ++ G   +        +    +     H +      
Sbjct: 169 IRVNPGVGIGYGDSERLSYAGATVTKFGIYAEQFGAALELAARHGLTVTWLHCHAGCGYL 228

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGG-------IHFTDKDYPVKDFCQRLKEFSEKY 225
               A  + +      F+ ++  +               TD+   ++ +   +     + 
Sbjct: 229 DPQLASFERVLDALDTFVARVPGLRGINLGGGLGLPHRATDRPLDLERWRAAVHARFGRR 288

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLY---QESATI 281
            + I +EPG+ I  +   L   V  +        +  +      +         +    I
Sbjct: 289 PLSIAIEPGDFIAKDGGMLVLRVAYVELKRNRRFVGLNGGFNLAIEPAFYDLPCEPVPCI 348

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                  +  V G    A D++G      PV+ GD ++  +  GY  +  +     
Sbjct: 349 RRPGAAQSVCVAGNINEALDLWGSDVSLPPVEPGDFVALLNAGGYASSMSSNHCLR 404


>gi|239994458|ref|ZP_04714982.1| putative diaminopimelate decarboxylase [Alteromonas macleodii ATCC
           27126]
          Length = 245

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 66/220 (30%), Gaps = 15/220 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +  G+   L +   G    S  E
Sbjct: 26  GTPVYIYSRATLERHWHAFNDAIGEHPHLVCYAVKANSNIGVLSVLAKLGSGFDIVSAGE 85

Query: 63  -VMLGHEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
              +           ++      D    A+          +  +L++    A ++     
Sbjct: 86  LARVIEAGGDASKVVFSGVGKKHDEIRYALQQGIMCFNVESEPELHRINQVAGEMGTKAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-------IKNVNGLMFHNNC--- 167
           I LRINP V              ++ G   +  + +          NV G+  H      
Sbjct: 146 ISLRINPDVDAKTHPYISTGLKANKFGIARERALATYELAASLPHLNVVGMDCHIGSQLT 205

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207
           E   F+     L  +  E       IE + +GGG+  T  
Sbjct: 206 EIGPFVDALERLLLLIDELAERNIIIEHLDVGGGLGVTYN 245


>gi|320528632|ref|ZP_08029785.1| pyridoxal-dependent decarboxylase, sheet domain protein
           [Solobacterium moorei F0204]
 gi|320130998|gb|EFW23575.1| pyridoxal-dependent decarboxylase, sheet domain protein
           [Solobacterium moorei F0204]
          Length = 392

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 59/380 (15%), Positives = 119/380 (31%), Gaps = 32/380 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP ++ D + +   +     I   A  +L  ++K      +  T+ +  D     S  E
Sbjct: 14  QTPCFIFDLEAVKERVKKMREIVGGA-YQLCYSIKANPF--LIPTMAEITDKLEVCSPGE 70

Query: 63  VMLGHE-KFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + +    +       Y+   K      DA+          ++  ++     A K  KK+ 
Sbjct: 71  LSICKALRVEPTKILYSGVNKTEVDVTDAMEYGVIHYTAESLLHMDIVNQVAGKYQKKVE 130

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE-------NKSF 172
           +    +                       ++  S +  V G+ +    +        K  
Sbjct: 131 ILPRLNAGSQ-----FGMSKEDLFSIYANEEKYSNVI-VKGIHYFAGTQRKKNDKQIKEL 184

Query: 173 LCFSAMLKNIEKEFGHFITQIEW-ISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS--VQI 229
                ++K I+  F   + QIE+   L   +   D         + + E  ++ S  V +
Sbjct: 185 DVLLELIKEIQTTFNRKVEQIEYGPGLSVPLFEGDDFSDTLKPLENIHEKLKELSGVVDL 244

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ-------ESATIY 282
            +E G    T   T  T  +D   N      +      H+  Y           +     
Sbjct: 245 TIEMGRFYSTFCGTYLTRAMDCKSNEGVNYCIVDGGMNHLNYYGQMMGMKVPHIQHLHAC 304

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGINMPT 341
            N       +CG  C   D+       + ++ GD ++F +   Y++      F    MP 
Sbjct: 305 DNRIEKNWCLCGSLCTTADVLVRDVTLQGLQEGDYLAFNNCGAYSVTEGIHLFLSRTMPL 364

Query: 342 IAVKNVDGTIKAIR--EFSY 359
           I ++  +      R  + SY
Sbjct: 365 ILLRTAENKYIVARQMQESY 384


>gi|83941445|ref|ZP_00953907.1| hypothetical protein EE36_04413 [Sulfitobacter sp. EE-36]
 gi|83847265|gb|EAP85140.1| hypothetical protein EE36_04413 [Sulfitobacter sp. EE-36]
          Length = 214

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 106/186 (56%), Positives = 130/186 (69%), Gaps = 2/186 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPYYLIDK +L  N++   ++R+ +G K LLALKCFA W +FD + QYMDG+TSSSLY
Sbjct: 1   MKTPYYLIDKSRLQANMEKIAWLREASGAKSLLALKCFATWSVFDFMAQYMDGSTSSSLY 60

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           EV LG+EKFGGETHAY+VAY D EI  VL+N D IIFN++ QL++F   A       GLR
Sbjct: 61  EVKLGYEKFGGETHAYSVAYDDDEIAEVLANSDKIIFNSIGQLDRFD--AASAGHTRGLR 118

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +NP VS S+F LADP RPFSRLGE    +I +    + GLMFHNNCEN  F  F+ ML  
Sbjct: 119 VNPGVSTSEFDLADPARPFSRLGEHDPAQIAAVADRITGLMFHNNCENDDFDRFADMLTL 178

Query: 182 IEKEFG 187
           IE    
Sbjct: 179 IEDALA 184


>gi|262277735|ref|ZP_06055528.1| lysine/ornithine decarboxylase [alpha proteobacterium HIMB114]
 gi|262224838|gb|EEY75297.1| lysine/ornithine decarboxylase [alpha proteobacterium HIMB114]
          Length = 394

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 57/353 (16%), Positives = 112/353 (31%), Gaps = 27/353 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEV 63
           P Y   K  L  + D            +L A+KC     +  TL +       ++S+ E+
Sbjct: 19  PVYCFRKHSLKLSADWFNNNFPG---DVLYAVKCNPTEAVVKTLIKNGIKNFDAASIDEI 75

Query: 64  MLGHEKFGGETHAYNVA---YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG- 119
            L  +        +          +            F++  +L+K              
Sbjct: 76  KLIKKLSPKSKIYFMHTVKKESSIKEAYFYHGVKAYSFDSKEELDKILKVTNNAKDLELF 135

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           LRI  S  +S+  L+                 + + K   G  FH   +    + +S  +
Sbjct: 136 LRIQTSNEHSEIDLSKKFGASINEAVSLSKIAKVKSKKF-GFSFHVGSQCMHPIAYSKAI 194

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-------KYSVQIYLE 232
           K++           + I++GGG   T  D   +      +E ++         + ++  E
Sbjct: 195 KDLGNIIKKSNIIPDIINVGGGFPTTYPDLYPQPIQNYFQEITQALNKLNLTKTPKLICE 254

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI-------YPNT 285
           PG A+V  +    +T++ +    K  + ++      + D    +             P+ 
Sbjct: 255 PGRALVAESG---STIVRVELKKKQHLYINDGTYGSLFDAGTPRFIFPTKAIQIENTPSK 311

Query: 286 GPYTAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                   G +C   D   G F     +  GD I    +  Y ++ +  FNG 
Sbjct: 312 RLVPYSFYGPTCDGLDYMKGPFMLPSNINSGDYIEIGQLGAYGMSLRTNFNGF 364


>gi|196000702|ref|XP_002110219.1| hypothetical protein TRIADDRAFT_53993 [Trichoplax adhaerens]
 gi|190588343|gb|EDV28385.1| hypothetical protein TRIADDRAFT_53993 [Trichoplax adhaerens]
          Length = 503

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 55/348 (15%), Positives = 106/348 (30%), Gaps = 18/348 (5%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           + L++   ++          +   V+   A+KC     +   L         +S+ E+ L
Sbjct: 135 FMLVNIGNIIERYREWK--MRLPNVEPFYAVKCNNDPVLLRILINLGVNFDCASMAEMQL 192

Query: 66  GH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                   +   Y    K       A  +N +  +F+   +L+K K         + +  
Sbjct: 193 ILDAGVHPDRIVYANTIKAVSHLRFAKENNINHTVFDNEDELHKIKKYHPNAKLALRICP 252

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           +     S+F L        R          S   +V G+ FH   +  + + +   +   
Sbjct: 253 DMKSCESRFQLGIKFGAPERDVAHLLKVARSLSLDVMGVSFHVGSDCLNPIGYEKAIIAS 312

Query: 183 EKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEP 233
           +K F     F    + + +GGG   +       +           + F  +  V+I  EP
Sbjct: 313 KKIFKLAEKFGYHFKELDIGGGFTASSALEMTFEKAAVTISKALQEHFPPESGVRIIAEP 372

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVC 293
           G    T   T+   ++      K           +   Y    +   +            
Sbjct: 373 GRFFPTRAYTIVLNIIGKRVVRKGNNDPFDLEHENAHLYENTSDIEKVLYYVNESVYGSI 432

Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
           G   L   +       KP+  GD I FE++  Y++     FN    P 
Sbjct: 433 GFITLDPTLII----LKPLNAGDWIYFEELGAYSLVLATEFNSFKKPK 476


>gi|149024019|gb|EDL80516.1| rCG31109, isoform CRA_a [Rattus norvegicus]
          Length = 459

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 55/353 (15%), Positives = 113/353 (32%), Gaps = 34/353 (9%)

Query: 6   YYLIDK-QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           +++ D    +  +     Y+     V+   A++C ++ G+   L +   G + +S  E+ 
Sbjct: 41  FFVADLGAVVRKHFCFLKYL---PRVRPFYAVRCNSSLGVLKVLAELGLGFSCASKAEME 97

Query: 65  LG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           L  H              K        +     + +  +++   K        K+ L I 
Sbjct: 98  LVQHIGVPASKIICANPCKQVAQIKYAAKHGVRLLSFDNEVELAKVVKSHPSAKMVLCIA 157

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S+S   L+       +      +  +     V G+ FH          ++  + +  
Sbjct: 158 TQDSHSLNHLSLRFGASLKSCRHLLENAKQSHVEVVGVSFHIGSGCPDPQAYAQSIADAR 217

Query: 184 KEF---GHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
             F         +  + LGGG    +      +D            F E   V I  E G
Sbjct: 218 LVFQMGAELGHTMNILDLGGGFPGLEGAKVRFEDMASVINSALDLYFPEGCGVDILAELG 277

Query: 235 EAIVTNTTTL------NTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY 288
              VT+  T+         VLD     +       S+  H+ + +    ++ ++ NT P 
Sbjct: 278 RYYVTSAFTVAVSIVAKKEVLDQPSREEQTGAAPKSIVYHLDEGVYGVFNSVLFDNTCPT 337

Query: 289 TA--------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
            A               + G +    D   E  +   +++GD + F+++  Y 
Sbjct: 338 PALQKKPSADQPLYSSSLWGPAVDGCDCVAEGLWLPQLQVGDWLVFDNMGAYT 390


>gi|167572157|ref|ZP_02365031.1| putative diaminopimelate decarboxylase [Burkholderia oklahomensis
           C6786]
          Length = 418

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 43/356 (12%), Positives = 105/356 (29%), Gaps = 23/356 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIR---KNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSL 60
           P +L D ++ ++N++         ++   ++  A+K      +   L +  + G  + S 
Sbjct: 49  PLFLYDPRRAVDNVERLRGALGGLQDGDFRIHYAMKANRFRPLLSELRRSPIFGVDACSP 108

Query: 61  YEVMLGHE-KFGGETHAYNV--AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E  +Y       D            +  +T+S +     ++      
Sbjct: 109 EELREALACGFAPERISYTAHGMMPDEAALLAALPDVHVNCDTLSAIALLGSRSPGREIG 168

Query: 118 IGLRINPSVSYSKFILADPNRPF-SRLGEKCKD----KIESEIKNVNGLMFHNNCENKSF 172
           I +     + Y             ++ G   +        +    +     H +      
Sbjct: 169 IRVNPGVGIGYGDSERLSYAGATVTKFGIYAEQFGAALELAARHGLTVTWLHCHAGCGYL 228

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGG-------IHFTDKDYPVKDFCQRLKEFSEKY 225
               A  + +      F+ ++  +               TD+   ++ +   +     + 
Sbjct: 229 DPQLASFERVLDALDTFVARVPGLRGINLGGGLGLPHRATDRPLDLERWRAAVHARFGRR 288

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLY---QESATI 281
            + I +EPG+ I  +   L   V  +        +  +      +         +    I
Sbjct: 289 PLSIAIEPGDFIAKDGGMLVLRVAYVELKRNRRFVGLNGGFNLAIEPAFYDLPCEPVPCI 348

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                  +  V G    A D++G      PV+ GD ++  +  GY  +  +     
Sbjct: 349 RRPGAAQSVCVAGNINEALDLWGSDVSLPPVEPGDFVALLNAGGYASSMSSNHCLR 404


>gi|314912082|gb|ADT63774.1| arginine decarboxylase [Rattus norvegicus]
          Length = 459

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 54/353 (15%), Positives = 113/353 (32%), Gaps = 34/353 (9%)

Query: 6   YYLIDK-QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           +++ D    +  +     Y+     V+   A++C ++ G+   L +   G + +S  E+ 
Sbjct: 41  FFVADLGAVVRKHFCFLKYL---PRVRPFYAVRCNSSLGVLKVLAELGLGFSCASKAEME 97

Query: 65  LG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           L  H              K        +     + +  +++   K        K+ L I 
Sbjct: 98  LVQHIGVPASKIICANPCKQVAQIKYAAKHGVRLLSFDNEVELAKVVKSHPSAKMVLCIA 157

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S+S   L+       +      +  +     V G+ FH          ++  + +  
Sbjct: 158 TQDSHSLNHLSLRFGASLKSCRHLLENAKQSHVEVVGVSFHIGSGCPDPQAYAQSIADAR 217

Query: 184 KEF---GHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
             F         +  + LGGG    +      ++            F E   V I  E G
Sbjct: 218 LVFQMGAELGHTMNILDLGGGFPGLEGAKVRFEEMASVINSALDLYFPEGCGVDILAELG 277

Query: 235 EAIVTNTTTL------NTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY 288
              VT+  T+         VLD     +       S+  H+ + +    ++ ++ NT P 
Sbjct: 278 RYYVTSAFTVAVSIVAKKEVLDQPSREEQTGAAPKSIVYHLDEGVYGVFNSVLFDNTCPT 337

Query: 289 TA--------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
            A               + G +    D   E  +   +++GD + F+++  Y 
Sbjct: 338 PALQKKPSADQPLYSSSLWGPAVDGCDCVAEGLWLPQLQVGDWLVFDNMGAYT 390


>gi|62079257|ref|NP_001014283.1| hypothetical protein LOC366473 [Rattus norvegicus]
 gi|50925583|gb|AAH78981.1| Similar to ornithine decarboxylase-like protein [Rattus norvegicus]
          Length = 494

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 54/353 (15%), Positives = 113/353 (32%), Gaps = 34/353 (9%)

Query: 6   YYLIDK-QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           +++ D    +  +     Y+     V+   A++C ++ G+   L +   G + +S  E+ 
Sbjct: 41  FFVADLGAVVRKHFCFLKYL---PRVRPFYAVRCNSSLGVLKVLAELGLGFSCASKAEME 97

Query: 65  LG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           L  H              K        +     + +  +++   K        K+ L I 
Sbjct: 98  LVQHIGVPASKIICANPCKQVAQIKYAAKHGVRLLSFDNEVELAKVVKSHPSAKMVLCIA 157

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S+S   L+       +      +  +     V G+ FH          ++  + +  
Sbjct: 158 TQDSHSLNHLSLRFGASLKSCRHLLENAKQSHVEVVGVSFHIGSGCPDPQAYAQSIADAR 217

Query: 184 KEF---GHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
             F         +  + LGGG    +      ++            F E   V I  E G
Sbjct: 218 LVFQMGAELGHTMNILDLGGGFPGLEGAKVRFEEMASVINSALDLYFPEGCGVDILAELG 277

Query: 235 EAIVTNTTTL------NTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY 288
              VT+  T+         VLD     +       S+  H+ + +    ++ ++ NT P 
Sbjct: 278 RYYVTSAFTVAVSIVAKKEVLDQPSREEQTGAAPKSIVYHLDEGVYGVFNSVLFDNTCPT 337

Query: 289 TA--------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
            A               + G +    D   E  +   +++GD + F+++  Y 
Sbjct: 338 PALQKKPSADQPLYSSSLWGPAVDGCDCVAEGLWLPQLQVGDWLVFDNMGAYT 390


>gi|320354385|ref|YP_004195724.1| Diaminopimelate decarboxylase [Desulfobulbus propionicus DSM 2032]
 gi|320122887|gb|ADW18433.1| Diaminopimelate decarboxylase [Desulfobulbus propionicus DSM 2032]
          Length = 404

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 54/359 (15%), Positives = 111/359 (30%), Gaps = 24/359 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG----VKLLLALKCFAAWGMFDTLNQYM-DGTTS 57
            TP ++   +++  NL+        AG      LL A+K      +   L Q    G  +
Sbjct: 37  GTPAFVYSAERVRQNLERLHAALSGAGLAGRFSLLYAMKANRFAPLLTFLRQSGLCGIDA 96

Query: 58  SSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
            S  EV       F     ++            L+    +  +  S        A K   
Sbjct: 97  CSPAEVEHAVSCGFSPAQISFTATSLSTRDLTALARYPGLFMDCDSLHAIRCWGALKPGT 156

Query: 117 KIGLRINPSVS---YSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNC 167
           +IGLR+NP++     +   L       ++ G   +   E+          V  + FH  C
Sbjct: 157 QIGLRVNPAMGIGRAANDKLHYAGATTTKFGIYWEQFAEALETAKAYDLQVRKIHFHTGC 216

Query: 168 ENKSFL-CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFS 222
              +        +      F     ++E +++GGG+        +   +  +   L+   
Sbjct: 217 GYLTPQLEQLERIIAHCFRFVEAAGEVERVNIGGGLGVPHLDSDRPLDLDRWAAILQGQF 276

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY----QES 278
               + + +EPG+ ++ +   L      +        +   +     P+   Y    Q  
Sbjct: 277 AGRGLHVEIEPGDYLLKDAGLLLVEKTFVERKKDRTFVGVDAGFNIAPEPAYYALPFQPL 336

Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
              Y  +      V G    A D++ E  +   +     ++  +   Y+    +     
Sbjct: 337 PLRYDPSPCTEMSVVGNINEALDVWYEQAWLPDLSSQSHLALINAGAYSSAMASHHCLR 395


>gi|83716834|ref|YP_440283.1| diaminopimelate decarboxylase [Burkholderia thailandensis E264]
 gi|83650659|gb|ABC34723.1| diaminopimelate decarboxylase, putative [Burkholderia thailandensis
           E264]
          Length = 907

 Score =  126 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 47/356 (13%), Positives = 101/356 (28%), Gaps = 23/356 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIR---KNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSL 60
           P +L D Q+ ++N+          +     +  A+K      +   L +  + G  + S 
Sbjct: 538 PVFLYDPQRAVDNVARLQRALGDLQRGDFHVYYAMKANRFRPLLSELRRSPIFGIDACSP 597

Query: 61  YEVMLGHE-KFGGETHAYNV--AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E  +Y       D            +  +T+S +     ++      
Sbjct: 598 EELREALACGFAPERISYTAHGMMPDEAALLAALPDVHVNCDTLSAIALLGSRSPGREIG 657

Query: 118 IGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIKN------VNGLMFHNNC--- 167
           I +     + Y             ++ G   +    +          V  L  H  C   
Sbjct: 658 IRVNPGVGIGYGDSERLSYAGATITKFGIYAEQFGAALELAARHGLTVTWLHCHAGCGYL 717

Query: 168 --ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
             +  SF      L                  LG     TD+   ++ +   +       
Sbjct: 718 DAQLDSFERVLDALDAFVARAPGLRGINLGGGLGLPHRATDRPLDLERWRAAVHARFGGR 777

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLY---QESATI 281
            + + +EPG+ I  +   L   V  +        +  +      +         +    +
Sbjct: 778 PLALAIEPGDFIAKDAGMLVLRVAYVELKRNRRFVGLNGGFNLAIEPAFYDLPCEPVPCV 837

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                  +  + G    A D++G+     PV+ GD ++  +  GY  +  +     
Sbjct: 838 RRPGPTQSVCLAGNINEALDVWGDDVSLPPVEPGDFVALLNAGGYASSMSSNHCLR 893


>gi|76818637|ref|YP_337010.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 1710b]
 gi|76583110|gb|ABA52584.1| diaminopimelate decarboxylase [Burkholderia pseudomallei 1710b]
          Length = 462

 Score =  126 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 56/356 (15%), Positives = 109/356 (30%), Gaps = 23/356 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIR---KNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSL 60
           P +L D Q+ L+N+          +    +L  A+K      +   L +  + G  + S 
Sbjct: 93  PVFLYDPQRALDNVARLQRALGDLQRGDFRLHYAMKANRFRPLLSELRRSPLFGIDACSP 152

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E+       F  E  +Y       +  A+L+    +  N  +        ++   ++IG
Sbjct: 153 EELREALACGFAPERISYTAHGMMPDEAALLAALPGVHVNCDTLSAIALLGSRSPGREIG 212

Query: 120 LRINPSVSYSKFILADPNRPF---SRLGEKCKD------KIESEIKNVNGLMFHNNC--- 167
           +R+NP V          +      ++ G   +               V  L  H  C   
Sbjct: 213 IRVNPGVGIGYGDSERLSYAGAAVTKFGIYAEQFGAALELAARHGLAVTWLHCHAGCGYL 272

Query: 168 --ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
             + +SF      L                  LG     TD+   ++ +   +       
Sbjct: 273 DAQLESFERVLDALDAFAARVPGLRGINLGGGLGLPHRATDRPLDLERWRAAVHARFGGR 332

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLY---QESATI 281
            + I +EPG+ I  +   L   V  +        +  +      +         +    +
Sbjct: 333 PLAIAIEPGDFIAKDAGMLVLRVAYVELKRNRRFVGLNGGFNLAIEPAFYDLPCEPVPCV 392

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                  +  V G    A D++G      PV+ GD I+  +  GY  +  +     
Sbjct: 393 RRPGPAQSVCVAGNINEALDVWGNDVSLPPVEPGDFIALLNAGGYASSMSSNHCLR 448


>gi|218779354|ref|YP_002430672.1| Orn/DAP/Arg decarboxylase 2 [Desulfatibacillum alkenivorans AK-01]
 gi|218760738|gb|ACL03204.1| Orn/DAP/Arg decarboxylase 2 [Desulfatibacillum alkenivorans AK-01]
          Length = 390

 Score =  126 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 47/374 (12%), Positives = 109/374 (29%), Gaps = 31/374 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP ++ +   +  N+     + +    K+L  ++C     +   L+Q   G    +  
Sbjct: 17  LDTPCFVYNLDIIEKNIQKLRQVLRPD--KILFGVRCNPLPQVLKILHQNQCGFDVGNPA 74

Query: 62  EVMLGHEKFGGETHAYNVAYK---DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+    +  G     +N       +   +           ++ SQ+      A   + K+
Sbjct: 75  ELEYVKQVAGDGADCFNGCPIASAESVKEMYAQGFRIFSADSASQVENL--AANAPNAKV 132

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
            +R++ S + S    +           +  D   +    V GL FH   +  +   + A 
Sbjct: 133 LIRVSSSNAGSVIADSHRLGVEESHANRLLDYAATRGLEVCGLSFHPGSQCGNLENWKAG 192

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYSVQI---YLEP 233
           +    +    +   ++ + + GG                  +++   KY       +++P
Sbjct: 193 ISTCARLAREY-PSLKILHIAGGFPALYQGSAPDACTVADAIRQAIGKYYPFTPVLWMQP 251

Query: 234 GEAIVTNTTTLNTTVLDISENIKNL----VIVDSSVEAHVPDYLLYQESATIYPNTGP-- 287
              +  +     TT +   E+             +    +       +            
Sbjct: 252 SRFLTADAAVTLTTAVHTDESCYPRRLFVDASVFAGHGEILTMNNRLQYPICGLAPASRF 311

Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIG-------DRISFEDVAGYNINR-----KNWFN 335
           Y   V G +    D F        V++         RI   +   Y  +      +  FN
Sbjct: 312 YHYQVHGCTSSGVDTFAADALLPEVRVDHVNPSRSSRIVICNAGAYCASFVRNSVRTGFN 371

Query: 336 GINMPTIAVKNVDG 349
           G   P +     + 
Sbjct: 372 GSKAPGLYFLKGEE 385


>gi|158523253|ref|YP_001531123.1| Orn/DAP/Arg decarboxylase 2 [Desulfococcus oleovorans Hxd3]
 gi|158512079|gb|ABW69046.1| Orn/DAP/Arg decarboxylase 2 [Desulfococcus oleovorans Hxd3]
          Length = 420

 Score =  126 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 61/388 (15%), Positives = 120/388 (30%), Gaps = 52/388 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P Y+++   L+            K        A+K      +  TL     G   SS 
Sbjct: 40  GSPLYVLEPDVLVRQAQAFQGAFSAKLPDPGFFFAVKSNNCPEVSKTLVSCGFGLDVSSG 99

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDA---VLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+ +  +     T  ++   K  E  A         T++ ++  ++ + +  A      
Sbjct: 100 EELAMALD-TEATTIVFSGPGKTTEELALAVANRGRVTVLIDSFGEMERLEAVAATAQTT 158

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDK----IESEIKNVNGLMFHNNCENKSFL 173
           +   +  + +          R F  L E+  D           N+ GL FH +       
Sbjct: 159 VLAGVRLTTAADG-----LWRKFGILPERLADFYETSKTCGHVNLAGLQFHTSWNLDPKA 213

Query: 174 CFSAMLKNIEKEFGH---FITQIEWISLGGGI---------------------------H 203
             + + +           FI Q+ +I +GGG                            H
Sbjct: 214 HVAFIERLGAVLARMPITFIRQLAFIDIGGGFWPEQGEWLHHPEGTPADPKTSFSHVRPH 273

Query: 204 FTDKDYPVKDFCQRLKEFSEKYSVQ-----IYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
           F     P+ DF   + E   ++        I +EPG  +      L   V+D   +   +
Sbjct: 274 FRLPARPITDFAGAIGEAVRRHIFPVADVRICMEPGRWVCHPAMQLLMRVIDRKADDLVV 333

Query: 259 VIVDSSVEAHVP-DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDR 317
               ++       +   +       P+T     ++ G  C   D++G  +F K +  GD 
Sbjct: 334 TDAGTNAIGWERFETDYFPVLNLSRPDTREQPCLILGSLCTPHDVWGFGYFGKNIAEGDI 393

Query: 318 ISFEDVAGYNINRKNWFNGINMPTIAVK 345
           +       Y  + +  F    +P + + 
Sbjct: 394 LLIPAQGAYTYSLRQNFI-KPLPRLVIL 420


>gi|301774454|ref|XP_002922649.1| PREDICTED: antizyme inhibitor 1-like [Ailuropoda melanoleuca]
          Length = 448

 Score =  126 bits (315), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 58/371 (15%), Positives = 109/371 (29%), Gaps = 31/371 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  K++        I     +K    +KC +   + + L     G   SS  E+ L
Sbjct: 40  FFVGDLGKIVKKHSQWQNIVAQ--IKPFYTVKCNSTPAVLEILAALGTGFACSSKTEMAL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             E     E   Y    K        +     I    +++   K      + K+ L I  
Sbjct: 98  VQELGVSPENIIYISPCKQVSQIKYAAKIGVNIMTCDNEVELKKISRNHPNAKVLLHIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             +              +      +  +     + G+ FH +   K    +   L +   
Sbjct: 158 EDNIGGEEGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARC 217

Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238
            F   G F   +  + +GGG      +   V      L    F E   V+I  EPG   V
Sbjct: 218 VFDMAGEFGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDVYFPEGSGVKIISEPGSYYV 277

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE--------------------- 277
           ++  TL   ++       +                +Y                       
Sbjct: 278 SSAFTLAVNIIAKKVVENDKFSSGVEKTGSDEPAFMYYMNDGVYGSFASKLSEDLNTIPE 337

Query: 278 -SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                  +   +T+ + G SC   D   E      + +GD + F+++   +++  + FN 
Sbjct: 338 VHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSLHEPSAFND 397

Query: 337 INMPTIAVKNV 347
              P I     
Sbjct: 398 FQRPAIYYMMS 408


>gi|194215024|ref|XP_001494034.2| PREDICTED: antizyme inhibitor 1 isoform 2 [Equus caballus]
          Length = 447

 Score =  126 bits (315), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 56/370 (15%), Positives = 111/370 (30%), Gaps = 30/370 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  K++        I     +K    +KC +A  + + L     G   S+  E+ L
Sbjct: 40  FFVGDLGKIVKKHSQWQNIVAQ--IKPFYTVKCNSAPAVLEILAALGTGFACSTKSEMAL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             E     E   Y    K        +     I    +++   K      + K+ L I  
Sbjct: 98  VQELGVSPENIIYISPCKQVSQIKYAAKVGVNIMTCDNEVELKKIARNHPNAKVLLHIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             +              +      +  +     + G+ FH +   K    +   L +   
Sbjct: 158 EDNIGGEEGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQAYVHALSDARC 217

Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238
            F   G F   +  + +GGG      +   V      L    F E+  ++I  EPG   V
Sbjct: 218 VFDMAGEFGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDIYFPEESGIKIISEPGSYYV 277

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE--------------------- 277
           ++  TL   ++       + +              +Y                       
Sbjct: 278 SSAFTLAVNIVAKKVVENDKLCSGVEKTGSDEPAFMYYMNDGVYGFASKLSEDLNTFPEV 337

Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                 +   +T+ + G SC   D   E      + +GD + F+++   + +  + FN  
Sbjct: 338 HKKYKEDEPLFTSSLWGPSCDELDQIVENCLLPELNVGDWLIFDNMGADSFHEPSAFNDF 397

Query: 338 NMPTIAVKNV 347
             P +     
Sbjct: 398 QRPAVYYMMS 407


>gi|320329052|gb|EFW85051.1| ornithine decarboxylase, putative [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330885445|gb|EGH19594.1| ornithine decarboxylase [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 371

 Score =  126 bits (315), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 54/351 (15%), Positives = 108/351 (30%), Gaps = 24/351 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVM 64
           +Y +D + +  N              +L A+K      + + L+Q        +SL EV 
Sbjct: 16  FYTVDPRWITRNAQQFSGCFPGT---VLYAMKANPLEQVLEALSQGGINHFDVASLAEVQ 72

Query: 65  LGHEKFGGETHAYNVAYKDCEI---DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
             H              K               + + ++  +L+K +D   +    I L 
Sbjct: 73  TVHNTLPTAVQYLMNPVKSRHCLHEAYYRYGVRSFVLDSEEELSKLRDVLPERDSTISLF 132

Query: 122 INPSVSYSKFIL--ADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +  + S S  +            L  +   ++ S      GL FH   +      + A L
Sbjct: 133 VRYAPSESTAVYDLRGKFGASPVLATQLVHQVASSTDWSLGLSFHVGSQAIEDGPWLAAL 192

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF------CQRLKEFSEKYSVQIYLEP 233
            + +         +  + +GGG      +            C  ++       + +  E 
Sbjct: 193 NDADAIVRDTAEHVRHLDIGGGFPGNYLNSMGNTPDLVGRVCDHIQTSPTLKDLNLICEA 252

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT---- 289
           G  +V    +L   VL   E               +      Q  A ++ +  PYT    
Sbjct: 253 GRGLVYGGMSLFARVLSRREQSVFCG--AGIFGGLLSAQQWLQFPARVWRDGTPYTGAAE 310

Query: 290 --AMVCGRSCLAGDIFG-EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
               + G +C + D     +     ++  D + F+    Y+++ +  FNG 
Sbjct: 311 NTFNIVGPTCDSMDRLAFPYSLASDIRESDWLEFQSTGAYSVSLRTPFNGF 361


>gi|269964929|ref|ZP_06179099.1| Diaminopimelate decarboxylase [Vibrio alginolyticus 40B]
 gi|269830405|gb|EEZ84629.1| Diaminopimelate decarboxylase [Vibrio alginolyticus 40B]
          Length = 199

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 52/180 (28%), Gaps = 9/180 (5%)

Query: 186 FGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
                  I  + +GGG+           P       L        +++  EPG AI  N 
Sbjct: 7   LKAQGINIRHLDVGGGLGVVYRDELPPQPSDYAKALLGRLENHQDLELIFEPGRAIAANA 66

Query: 242 TTLNTTVLDISENIKNLV-IVDSSVEAHVPDYLLYQES---ATIYPNTGPYTAMVCGRSC 297
             L T V  +         I+D+++   +   L                  T  + G  C
Sbjct: 67  GILLTRVEFLKHTEHKNFAIIDAAMNDLMRPALYQAWQDIVPVSPRKGEAQTYDLVGPIC 126

Query: 298 LAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF 357
             GD  G+      ++ GD ++      Y     + +N        + +   +    +  
Sbjct: 127 ETGDFLGKDRALV-LQEGDLLAVRSAGAYGFVMSSNYNTRTRAAEVMVDGKQSHLVRQRE 185


>gi|224046591|ref|XP_002200322.1| PREDICTED: ornithine decarboxylase antizyme inhibitor [Taeniopygia
           guttata]
          Length = 450

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 56/373 (15%), Positives = 116/373 (31%), Gaps = 33/373 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D  KL+ N      +     +K    +KC +  G+ + L     G   SS  E+ L
Sbjct: 40  FYVGDLGKLVRNNVQWQNVMAP--IKPFYPVKCNSTPGVLEILGTLGVGFACSSKAEMAL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             +     E   Y    K        +     I    + +   K      + K+ L I  
Sbjct: 98  VQDLGISPENIIYTNPCKQASQIKYAAKAGINIMTCDNDIELKKISRNHPNAKLLLHIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
               +   +        +      +  +     + G+ FH +   K    +   L +   
Sbjct: 158 EDITAGEEMNMKFGTTLKNCRHLMECAKELGVQIVGVKFHVSGSCKDLQTYIHALSDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
            F     F  ++  + +GGG   ++   ++            F ++  + +  EPG   V
Sbjct: 218 VFDMAEEFGFKMNMLDIGGGFTGSELQLEEVNHVIRPLLDVYFPKESGINVIAEPGCYYV 277

Query: 239 TNTTTLNTTVLD---ISENIKNLVIVDSSVEAHVPDYLLY-------------------- 275
           ++  TL   V+    +  +      V+ +     P +  Y                    
Sbjct: 278 SSAFTLAVNVIAKKTVEYDKFLPSGVEQTRNDDEPVFTYYINDGVYGSFASKLSEKLNTI 337

Query: 276 -QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
            +       +   + + + G SC   D   E      + +GD + F+++    +  ++ F
Sbjct: 338 PEVHKKYKEDEPLFASSLWGPSCDELDQIVENCLLPELSVGDWLIFDNMGSGTLGEQSTF 397

Query: 335 NGINMPTIAVKNV 347
           N    P I     
Sbjct: 398 NDYQRPLIYYMMS 410


>gi|116335079|ref|YP_802574.1| diaminopimelate decarboxylase [Candidatus Carsonella ruddii PV]
 gi|116235360|dbj|BAF35208.1| diaminopimelate decarboxylase [Candidatus Carsonella ruddii PV]
          Length = 398

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 56/379 (14%), Positives = 129/379 (34%), Gaps = 25/379 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE-V 63
           P Y+ D +K+L NL    Y+ K   +    ++K      +   ++  +      S+ E +
Sbjct: 25  PIYIYDFKKILKNL----YLIKKTKIFCFYSIKTNNNKFLLKLISNIIKKFDIVSIEEFL 80

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIGLR 121
            + +         ++ + K      +  N +   I   ++ +L K      K  K I L 
Sbjct: 81  NIIYINKKKTYIIFSGSGKSISEILISINLNIFSINIESIQELFKIFFFCNKHKKNINLM 140

Query: 122 I--NPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFL 173
           I  NP++           +  ++ G    +       I+    N  G  FH   +     
Sbjct: 141 IRLNPNIDSCSHNKISTGKNTNKFGINISNIKHFLLIIKITKLNFIGYDFHIGSQICRLS 200

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGG----IHFTDKDYPVKDFCQRLKEFSEKYS--V 227
               + K I+    +   ++ ++ +GGG     +  + +    ++ + +K+  +KY+   
Sbjct: 201 PLKKLFKTIKLINDY--KKVNFVDIGGGKNINYYENNININFNNYYRSIKKLIKKYNLSF 258

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTG 286
           ++ +E G     N+  + + V  +  N    + + +  +   +   +          N G
Sbjct: 259 KLIIELGRFFFGNSCIILSKVNYLKFNKIFKIAILNVGMNDIMRPAIYNSYHKIESNNIG 318

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
                V G  C + D F        +     I       Y+    + +N        V  
Sbjct: 319 YKIKNVFGPICESSDKFY-NSKYIKINSNSLIIVYSCGSYSKVMSSNYNSKKKIFDIVVY 377

Query: 347 VDGTIKAIREFSYNDYYNN 365
            +      ++  +N+  +N
Sbjct: 378 KNKIKIVYKKEKFNNLISN 396


>gi|328875253|gb|EGG23618.1| group IV decarboxylase [Dictyostelium fasciculatum]
          Length = 435

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 48/396 (12%), Positives = 113/396 (28%), Gaps = 46/396 (11%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG- 66
           + +          +             A+K      +     +   G   +S  E+ +  
Sbjct: 36  VYNLDHFRALAKESNDRFNGIQTM---AVKSNPVMSLLKEAIKSGLGAEVASFGELKIAE 92

Query: 67  HEKFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI------G 119
              F  +   Y +      E++  ++    I  +   ++++  +  +KL +K       G
Sbjct: 93  LAGFTPDKIIYDSPIKTIQELEYAINLGVVINVDNFQEMDRVVEIVEKLDEKKKSTLVIG 152

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKI------ESEIKNVNGLMFHNNCE----N 169
           +R+NP V   K+       P S+ G    D         ++   + G+  H   +     
Sbjct: 153 IRVNPQVQAGKYADLSTGVPTSKFGIGLDDSRERIISYYTQYNWMRGVHLHVGSQGFEMY 212

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY-------PVKDFCQRLKEFS 222
           ++      ++  +++  G    QI  +++GGG+                    +      
Sbjct: 213 QTSDAVVKVMSLVKEINGLTNNQITHVNVGGGLSVNFDTEQDKPTFTDYSTHLKERIPEL 272

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLYQES--- 278
              S  +  E G +       + + V    ++    + V  +     +     +      
Sbjct: 273 FDGSFTLISEFGRSYWAKCGVVISQVEYAKKSGGRDIAVVHAGANLYIRTIYQHPLWKLR 332

Query: 279 --------ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                          G     + G  C A D+  +      +  GD +   D   Y  + 
Sbjct: 333 VTVFDSTGVYQDGKDGASVMDLAGPCCFAADLLVKERLLPTINKGDYVMVHDSGAYFYSS 392

Query: 331 KNWFNGINMPTIAVKNV------DGTIKAIREFSYN 360
            + +N    P I           D   +  +  +  
Sbjct: 393 YSHYNLRLAPPIFAVESVDGKTYDSIKQIKKGETIE 428


>gi|291525897|emb|CBK91484.1| Diaminopimelate decarboxylase [Eubacterium rectale DSM 17629]
          Length = 434

 Score =  125 bits (314), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 52/426 (12%), Positives = 118/426 (27%), Gaps = 76/426 (17%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVK---LLLALKCFAAWGMFDTLNQYMDGTTS 57
           M +TPYY+ D  +               G +   L  ++K      +   L + +D    
Sbjct: 1   MRQTPYYVFDTDEFAKRAAMIRAALDCKGGRRIPLCFSIKANPF--LLHRLPEGLDHVEV 58

Query: 58  SSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL 114
            S  E+ +        E+  Y+   K+              +   ++       +    L
Sbjct: 59  CSPGELEICIALGVKPESIIYSGVMKEKCDIERAVSYGAGILTCESIRHAALISEV--ML 116

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNC 167
                       + +K  +       ++ G   +D               V G+ +++  
Sbjct: 117 ECIQEGAHEAEFAETKAHVILRLTSGNQFGMSLEDIEYIISHPDEFKGIAVMGIHYYSGT 176

Query: 168 E---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF--------CQ 216
           +    K       +   +      +  + + +  G G+     +   ++          +
Sbjct: 177 QKSLRKINKDLEKIKSALTGLKEKYGFEPQLVEYGPGLCVEYFEEDWQEKEKQSLDEAAE 236

Query: 217 RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV------- 269
            L+EF+E+Y +   +E G  +  +     T V D+         +      H+       
Sbjct: 237 VLREFAEEYPLG--IEMGRFLAASCGKYYTQVKDLKSTGDANYAILDGGIHHLNYFGQRM 294

Query: 270 ----PDYLLYQESATIYPNT----------------------------------GPYTAM 291
               P   +Y+     +                                           
Sbjct: 295 AMQVPPISIYRADEIYFGEKLGEIKGTAGPIGNTFNDCEVSENEERTEEELTQLPDTDYT 354

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIAVKNVDGT 350
           +CG  C   D+       K +++GD + F     Y++      F    +P I   + +  
Sbjct: 355 LCGSLCTVADVLVREVKLKKLELGDVLEFGHCGAYSVTEAPALFLSRQLPAIYAYSKEYG 414

Query: 351 IKAIRE 356
            + +RE
Sbjct: 415 YECLRE 420


>gi|320324002|gb|EFW80085.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2
           [Pseudomonas syringae pv. glycinea str. B076]
          Length = 406

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 54/351 (15%), Positives = 108/351 (30%), Gaps = 24/351 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVM 64
           +Y +D + +  N              +L A+K      + + L+Q        +SL EV 
Sbjct: 51  FYTVDPRWITRNAQQFSGCFPGT---VLYAMKANPLEQVLEALSQGGINHFDVASLAEVQ 107

Query: 65  LGHEKFGGETHAYNVAYKDCEI---DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
             H              K               + + ++  +L+K +D   +    I L 
Sbjct: 108 TVHNTLPTAVQYLMNPVKSRHCLHEAYYRYGVRSFVLDSEEELSKLRDVLPERDSTISLF 167

Query: 122 INPSVSYSKFIL--ADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +  + S S  +            L  +   ++ S      GL FH   +      + A L
Sbjct: 168 VRYAPSESTAVYDLRGKFGASPVLATQLVHQVASSTDWSLGLSFHVGSQAIEDGPWLAAL 227

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF------CQRLKEFSEKYSVQIYLEP 233
            + +         +  + +GGG      +            C  ++       + +  E 
Sbjct: 228 NDADAIVRDTAEHVRHLDIGGGFPGNYLNSMGNTPDLVGRVCDHIQTSPTLKDLNLICEA 287

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT---- 289
           G  +V    +L   VL   E               +      Q  A ++ +  PYT    
Sbjct: 288 GRGLVYGGMSLFARVLSRREQSVFCG--AGIFGGLLSAQQWLQFPARVWRDGTPYTGAAE 345

Query: 290 --AMVCGRSCLAGDIFG-EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
               + G +C + D     +     ++  D + F+    Y+++ +  FNG 
Sbjct: 346 NTFNIFGPTCDSMDRLAFPYSLASDIRESDWLEFQSTGAYSVSLRTPFNGF 396


>gi|71734011|ref|YP_274894.1| ornithine decarboxylase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|71554564|gb|AAZ33775.1| ornithine decarboxylase, putative [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 371

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 54/351 (15%), Positives = 108/351 (30%), Gaps = 24/351 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVM 64
           +Y +D + +  N              +L A+K      + + L+Q        +SL EV 
Sbjct: 16  FYTVDPRWITRNAQQFSGCFPGT---VLYAMKANPLEQVLEALSQGGINHFDVASLAEVQ 72

Query: 65  LGHEKFGGETHAYNVAYKDCEI---DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
             H              K               + + ++  +L+K +D   +    I L 
Sbjct: 73  TVHNTLPTAVQYLMNPVKSRHCLHEAYYRYGVRSFVLDSEEELSKLRDVLPERDSTISLF 132

Query: 122 INPSVSYSKFIL--ADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +  + S S  +            L  +   ++ S      GL FH   +      + A L
Sbjct: 133 VRYAPSESTAVYDLRGKFGASPVLATQLVHQVASSTDWSLGLSFHVGSQAIEDGPWLAAL 192

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF------CQRLKEFSEKYSVQIYLEP 233
            + +         +  + +GGG      +            C  ++       + +  E 
Sbjct: 193 NDADAIVRDTAEHVRHLDIGGGFPGNYLNSMGNTPDLVGRVCDHIQTSPTLKDLNLICEA 252

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT---- 289
           G  +V    +L   VL   E               +      Q  A ++ +  PYT    
Sbjct: 253 GRGLVYGGMSLFARVLSRREQSVFCG--AGIFGGLLSAQQWLQFPARVWRDGTPYTGAAE 310

Query: 290 --AMVCGRSCLAGDIFG-EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
               + G +C + D     +     ++  D + F+    Y+++ +  FNG 
Sbjct: 311 NTFNIFGPTCDSMDRLAFPYSLASDIRESDWLEFQSTGAYSVSLRTPFNGF 361


>gi|304312358|ref|YP_003811956.1| hypothetical protein HDN1F_27300 [gamma proteobacterium HdN1]
 gi|301798091|emb|CBL46313.1| Hypothetical protein HDN1F_27300 [gamma proteobacterium HdN1]
          Length = 426

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 54/391 (13%), Positives = 117/391 (29%), Gaps = 34/391 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           YY +D  K  +N+   L   +      K+  + K      +     Q        S  E 
Sbjct: 23  YYWLDLPKFRSNVQRFLAAFQRYYPRTKIAYSCKTNYLPTLIQAAYQLGCLAEVVSATEY 82

Query: 64  MLG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTV---SQLNKFKDKAQKLHKKI 118
            +        +   YN        +         +  ++V       K   +       +
Sbjct: 83  DIAKRVGIKPQDIIYNGPVKSASSLLNAFHEGAQVHIDSVTEAHLAAKLLSEHTGPEITL 142

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
           G+R    +  +       +    +  +     + +      G+  H +   +S   F   
Sbjct: 143 GIRCTFPIDGNTNSQFGLDPTDEQARQAIHTLLNAPRVRSAGVHAHFSTRERSIASFRER 202

Query: 179 LKNIEKEFGHFIT--QIEWISLGGGIHFTDK-------------DYPVKDFCQ-RLKEFS 222
            + +       I   Q+ +I +GGG                        +     LK   
Sbjct: 203 TEKLLHWAETLIPPKQLAFIDVGGGFFGPMPASLQASFGIEIPSYEDYAEAVAGTLKRKF 262

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL------LYQ 276
                ++ +EPG A+V +     T ++ +  +   +  + +    ++           Y 
Sbjct: 263 GNDGPELIIEPGAALVADVMGFCTEIVALKRSHGRVHGIVAGSLQNLRPTGRSTAPLPYH 322

Query: 277 ESATIYPNT--GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
               +  N     + A + G +C+  D+  +  F+  + +GDR  F ++  Y+   K  F
Sbjct: 323 YEPALERNDAIAAHDAKIMGNTCMETDVLLDG-FQGSLAVGDRFYFSNMGAYSWVFKPPF 381

Query: 335 NGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
                P I   + +  I  +R   +  D   
Sbjct: 382 IA-PAPAIYCIDDEPPITLVRRAETAEDMLA 411


>gi|328882870|emb|CCA56109.1| Diaminopimelate decarboxylase [Streptomyces venezuelae ATCC 10712]
          Length = 441

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/377 (14%), Positives = 107/377 (28%), Gaps = 39/377 (10%)

Query: 27  NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGGETHAY--NVAYKDC 84
            A V    A+K      +   L+    G   +S  E+ L        TH    + A    
Sbjct: 53  EAHVLHAFAVKAAPLVPVLRLLHAAGLGVEVASPGELALARAAGVPPTHTVLDSPAKTPA 112

Query: 85  EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--KIGLRINPSVSYSKFILADPNRPFSR 142
           E+   L+    +  + + +L +             +GLR+NP V              S+
Sbjct: 113 ELRQALALGIAVNADNLQELARLDALVASAPTASPLGLRVNPQVGAGSIGALSTATATSK 172

Query: 143 LGEKCKD--------KIESEIKNVNGLMFHNNCE----NKSFLCFSAMLKNIEKEFGHFI 190
            G   +D        +   E   +  L  H   +             +    E+      
Sbjct: 173 FGVALRDEGARKTVVQAYLERPWLTRLHTHTGSQGVPLALMAAGVGEVYALAEEINRAAG 232

Query: 191 TQ-IEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-------SVQIYLEPGEAIVTNTT 242
            Q I+ + +GGG+                                ++  E G +++    
Sbjct: 233 RQQIDTLDIGGGLPVNFASDEETPTYAEYARLLADTVPGLFDGRYRLVTEFGRSLLAKHG 292

Query: 243 TLNTTVLDISENIKNLVIVDSSVEAHV---------PDYLLYQESATIYPNTGPYTAM-V 292
           T+   V     +    + V  +                  +    +   P TG  T   V
Sbjct: 293 TVLARVEYTKTSGGRPIAVTHAGVQLATRTVYAPESWPLRVLAYDSEGRPRTGDVTVQDV 352

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI--AVKNVDGT 350
            G +C AGD+         +  GD ++  D   Y  +    +N +  P +     + DG 
Sbjct: 353 AGPACFAGDLLATGRALPLLHPGDVVAVPDTGAYYFSHHYAYNSLLRPPVHGFTVDEDGA 412

Query: 351 IK---AIREFSYNDYYN 364
           +      +  +  +   
Sbjct: 413 VVFAAVRKPQTLAEIVA 429


>gi|328947882|ref|YP_004365219.1| Diaminopimelate decarboxylase [Treponema succinifaciens DSM 2489]
 gi|328448206|gb|AEB13922.1| Diaminopimelate decarboxylase [Treponema succinifaciens DSM 2489]
          Length = 389

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 55/385 (14%), Positives = 118/385 (30%), Gaps = 32/385 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP+YL D + L N ++           +L  A+K  A   +   L          S  E
Sbjct: 14  GTPFYLFDFEILKNRIELLNNKLPK-NAELCYAIKANAF--LLQALKDLKILFEVCSNGE 70

Query: 63  VMLGHEK-FGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + + H+         ++   K  E    A   + +TI   ++      K+ A + +    
Sbjct: 71  LSICHKYNVNPNHIVFSGVVKTKEDIKNAWKMHVNTITLESLEHCRFLKEVANEENGDYI 130

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE--NKSFLCFSA 177
             +   +S             + + +  K   + +  N  G+ + +  +   K       
Sbjct: 131 QNVLIRLSS----GNQFGMSENDVLDALKILKQLKNVNFRGVHYFSGTQKKLKKIETEIQ 186

Query: 178 MLKNIEKEFGHF-ITQIEWISLGGGIHFTDKDYP----VKDFCQRLKEFSEKYSVQIYLE 232
            +++           +   I  G G  F     P      +    +    EK   +  +E
Sbjct: 187 YIQDYCDNLQKMSGIEFNEIEYGPGFSFDYFAQPDFSENYNDFDAVAGLLEKSKYKFTIE 246

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-----------VPDYLLYQESATI 281
            G  I ++     + ++D+         +      H           +P   L + +   
Sbjct: 247 AGRFIASSCGFYVSRIMDLKSTNDVNYCLIDGGINHLNYYGQIMGMKIPPVSLVKNNTDA 306

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGINMP 340
             +    +  +CG  C   D+  +        IGD + F+++  Y++      F    +P
Sbjct: 307 KSDKCA-SFEICGSLCTTADVITKCLSLDSPAIGDFLVFKNIGAYSVTEGIYLFLSHALP 365

Query: 341 TIAVKNVDGTIKAIREFSYNDYYNN 365
            +   +           S+  Y  N
Sbjct: 366 CVISYDKMEYKIL--RQSFETYKIN 388


>gi|315505089|ref|YP_004083976.1| orn/dap/arg decarboxylase 2 [Micromonospora sp. L5]
 gi|315411708|gb|ADU09825.1| Orn/DAP/Arg decarboxylase 2 [Micromonospora sp. L5]
          Length = 390

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 54/346 (15%), Positives = 99/346 (28%), Gaps = 28/346 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P Y+ D   L  +            V+LL A+K      +  TL   +DG  ++S  E+ 
Sbjct: 4   PVYVHDLDALAGHARAIRAALP-PEVELLYAVKANPEPDVLRTLAPVVDGFETASRGELR 62

Query: 65  LGHEKFGGETHAYNVAY---KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIG 119
              +       A              A+ +    I   + ++L +    A       ++ 
Sbjct: 63  RLAQVLPERAAAAYAGPGKTDADLAAALAAGVARIHVESPAELRRLGALAVSAGVRARVL 122

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-----NVNGLMFHNNCENKSFLC 174
           LR+N  +      L    RP    G    + +    +      V G+  H      + L 
Sbjct: 123 LRVNLPLEAPGASLVMGGRPSP-FGMDPAEAVACARRPPAGVEVRGVHVHLASGLDAPLA 181

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSVQIY 230
                  +             + +GGG+          +    + + L    + Y     
Sbjct: 182 AMVAEAVVRWSVSEVGA--REVDVGGGMAVDYVDPAARFDWASYGRALAGVCDAYPGVRL 239

Query: 231 -LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYP----- 283
            +EPG ++        T V+D+  +      V +    H+                    
Sbjct: 240 RVEPGRSVTAYCGAYLTEVIDVKRSYGEWFAVVAGGTHHLRTPAAKGHAQPFTVHQRYSG 299

Query: 284 ---NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
               T      V G+ C   D+        PV + D + F     Y
Sbjct: 300 DGPCTDGGPVTVVGQLCTPKDVLSRTTHAGPVGVRDVLVFAMAGAY 345


>gi|303248030|ref|ZP_07334296.1| Orn/DAP/Arg decarboxylase 2 [Desulfovibrio fructosovorans JJ]
 gi|302490587|gb|EFL50492.1| Orn/DAP/Arg decarboxylase 2 [Desulfovibrio fructosovorans JJ]
          Length = 426

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/357 (15%), Positives = 99/357 (27%), Gaps = 31/357 (8%)

Query: 39  FAAWGMFDTLNQYMDGTTSSSLYEVMLGH-EKFGGETHAY-NVAYKDCEIDAVLSNCDTI 96
                +   L     G  ++SL EV L     F      + + A    E+   +S    +
Sbjct: 52  NPLPPVLAFLAGLGAGAEAASLPEVRLALDAGFTAGRIVFDSPAKTFEELRLAVSLGLNV 111

Query: 97  IFNTVSQLNKFKDK--AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD----- 149
             + + ++ +      +     + GLR+NP V   +         +S+ G    D     
Sbjct: 112 NADNLDEVERLGTVGASLGRAPRAGLRVNPQVGLGRIKATSVAGVYSKFGVPLADREAIL 171

Query: 150 KIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI-----EKEFGHFITQIEWISLGGGIHF 204
              +    + GL  H   +  S     A +  I     E        ++    LGGG+  
Sbjct: 172 AAFARCPWLEGLHVHIGSQGCSLDMLVAGVGAIYDLALEINARLGARRVRRFDLGGGLPV 231

Query: 205 TDKDYPVKD----FCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKN 257
             +D         +   L E           +  E G  +        + V  +     +
Sbjct: 232 AYRDTDDPPTPGVYAAALAERCPGLFSGQFDLVTEFGRFLHAPCGLAVSRVEYVKRQPGH 291

Query: 258 LVIV-DSSVEAHVPDYLLYQESATIYPNTGPY---------TAMVCGRSCLAGDIFGEFH 307
              V     +  V +    +          P          T  + G  C +GD      
Sbjct: 292 NTAVLHLGADMFVRECYNPELWTHGVTLLSPDGREKGGERGTWHLAGPLCFSGDFPIRQA 351

Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
               V  GD ++  DV  Y +   + +N   MP I                  D   
Sbjct: 352 RLPDVAPGDLVAIHDVGAYTLAMWSRYNSRQMPRILGYRQGRFNVLREREEPEDLVR 408


>gi|289663320|ref|ZP_06484901.1| diaminopimelate decarboxylase [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 429

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 48/354 (13%), Positives = 100/354 (28%), Gaps = 29/354 (8%)

Query: 21  ALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGGETHAY-NV 79
            +  +     +L  A K  A   +  TL  ++DG  ++S  E+   H +       +   
Sbjct: 41  WMRAQLPPRCELFYAAKANAEPPILRTLAAHVDGFEAASGGELAWLHAQQPQAALLFGGP 100

Query: 80  AYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRINPS---VSYSKFILAD 135
              D E+    +  D  +   ++S+L +    A    + + + +  +          L  
Sbjct: 101 GKLDTELAQAAALPDCTVHVESLSELERLAAIAAHAGRCVSVFLRMNIAVPGAQSTRLMM 160

Query: 136 PNRP-----FSRLGEKCKDKIESEIK-NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHF 189
              P          +     +++     + G  FH     +       ++    +    +
Sbjct: 161 GGHPSPFGLDPCDLDTAMQLLQASPSLRLEGFHFHLMSHQRDAAAQLHLIAAYLRTVQQW 220

Query: 190 ITQ----IEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSV--QIYLEPGEAIVT 239
                     ++ GGG           +    FC  L     ++    ++ LEPG  +  
Sbjct: 221 RHTYALGPLRVNAGGGFGVDYLAPELSFDWAGFCAGLPALLHEHGTDLRLRLEPGRYVSA 280

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY-------TAMV 292
           +       VLD+  +      V      H                 G            +
Sbjct: 281 SCGWYLMEVLDLKRSHGAWFAVARGGTHHFRMPAAQAHDHPFRVLRGARAPVLRDTPVTL 340

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIAVK 345
            G+ C   D+         +  GD ++F     Y  N  +  F     P +   
Sbjct: 341 VGQLCTPKDVLARDQHVAALAPGDCLAFPLAGAYAWNISHQHFLMHPAPQMVFL 394


>gi|155121993|gb|ABT13861.1| hypothetical protein MT325_M307L [Paramecium bursaria chlorella
           virus MT325]
          Length = 372

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 51/351 (14%), Positives = 116/351 (33%), Gaps = 24/351 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D + + +       I     ++   A+KC     +   L         +S  E+  
Sbjct: 19  FYVSDPKFVEHLTSVWSDIFPL--IQPFYAVKCNNDKVLLKVLADNGVNFDCASKNEITQ 76

Query: 66  GHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
             +         +    K  +    A  +  + + F++  +L+K K+   +    + +R 
Sbjct: 77  VLKLGVDSSRIIFAHTVKSPDSIVFAKQAGVNLMTFDSSFELDKIKNYHPEAKMVLRIRC 136

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           +   +  K                   K+      V+G+ FH    +++   +   LK+ 
Sbjct: 137 DDPHALVKLEKYGALADEIETLLGHAKKL---HIAVSGISFHVGSGSRNPDAYWKALKSA 193

Query: 183 EKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEP 233
            + +        +++ I +GGG++   +D      C        +K+F     V+   EP
Sbjct: 194 REAYDIATAMGHKVDIIDIGGGMYADIEDNGTVSTCVAEYVRDGIKDFFSDTGVKFIAEP 253

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT-------IYPNTG 286
           G     + + L   V+             +         ++Y+++         +  N  
Sbjct: 254 GRFFAQHYSVLACQVVGKRVRDGYYEYFVNESTYGGFSNVIYEKAVPEPIIVKDVGENDE 313

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
            + +++ G +C   D+  +      + I D I F     Y       FNG 
Sbjct: 314 KHMSVIYGCTCDGIDVINKQTHIPELNIDDWIYFPMWGAYTNCLVTSFNGF 364


>gi|198430947|ref|XP_002123875.1| PREDICTED: similar to putative ornithine decarboxylase [Ciona
           intestinalis]
          Length = 437

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 54/374 (14%), Positives = 110/374 (29%), Gaps = 23/374 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +YL D  +++ NL           ++   A+KC  +  +   L     G   +S +E+  
Sbjct: 49  FYLADLGQVVRNLQLWTKHM--PKIRPYYAMKCNPSQPVVQLLASLGVGFDCASKFEIET 106

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             +     E   + V  K              +    +     K K      K+ LR+N 
Sbjct: 107 ALKCGVKPEDILFAVPCKMSSHIEYACQTGVQVMTVDNADELHKIKRIHPTGKLLLRLNV 166

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
               +   + D          +     +    ++ G+ FH    + SF      L+   +
Sbjct: 167 KYCGNGIKMGDKFGVTMSEARELILLCKELELDLIGVCFHPGSGSNSFETIRDSLQRCRE 226

Query: 185 EFGH---FITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
            +          + + +GGG            +      + F  +  + +  EPG   V 
Sbjct: 227 LYDFAKLIGNDFKIVDIGGGFVCGDNFIKISKQVNATIDRLFPPETGLTVIAEPGRFFVE 286

Query: 240 NTTTLNTTVLDISENIKNLVIV----DSSVEAHVPDYLLYQESATIYPNTGPYTAM---V 292
           N     T+V   +    +          +           +   ++             V
Sbjct: 287 NAFAFVTSVHGKAIRGDSAKYYIGSGVFAAFCLKYFEKFIRIPESLSRQADKCKCYASTV 346

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352
            G +    DI          +I D   F+++  Y+      FNG       +    G   
Sbjct: 347 YGPTGAGDDIVLCDSMLPEAQIDDWWLFDNMGAYSPLLSLGFNG------YMVTKAGFF- 399

Query: 353 AIREFSYNDYYNNL 366
            I + ++N+  + L
Sbjct: 400 -ISQDTWNEIADKL 412


>gi|34392272|emb|CAE46410.1| ornithine decarboxylase [Chlamydomonas reinhardtii]
 gi|34392274|emb|CAE46409.1| ornithine decarboxylase [Chlamydomonas reinhardtii]
          Length = 396

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 53/347 (15%), Positives = 94/347 (27%), Gaps = 30/347 (8%)

Query: 19  DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV-MLGHEKFGGETHAY 77
                      V    A+KC    G+   LN    G   +   E+ M+           +
Sbjct: 22  QAWRAAMPR--VVPFYAVKCNPEPGILKLLNALGAGFDCACKGELDMMLRMGVSPNRIIF 79

Query: 78  NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPN 137
               K           +       +     K        K  LRI      ++  L    
Sbjct: 80  AHPCKRASDIRYAREHNVQYTTFDTVSELHKIAQMNPDFKCVLRIRADDPDARVPLGLKY 139

Query: 138 RPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFI---TQIE 194
                  +      +     V G+ FH     ++   FS  + N  K F         +E
Sbjct: 140 GAEVSEADVLLRTAKELGLQVVGVSFHVGSACQNLSTFSGAIVNARKVFDEAGALGFNME 199

Query: 195 WISLGGGIHFTDKDY--------PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNT 246
            + +GGG      +                    F  +  V++  EPG      ++TL T
Sbjct: 200 LLDIGGGFTGHFDEMGNVMFGVIANTINAALATNFPPEMGVRVIAEPGRYFAETSSTLLT 259

Query: 247 TV----------LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT------A 290
            V            + ++      +  S    + D           P     T      +
Sbjct: 260 PVYGQRDRVAADGSVKKDYWLTDGLYGSFNCILYDGQNPGYKVVRSPLMADSTDSRTFLS 319

Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
            + G +C + D   +      ++ GD + + +   Y +     FNGI
Sbjct: 320 TLWGPTCDSADCVYKDVTLPVLRNGDWLMWNNAGAYTVAGACDFNGI 366


>gi|253988111|ref|YP_003039467.1| hypothetical protein PAU_00630 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253779561|emb|CAQ82722.1| conserved hypothetical protein [Photorhabdus asymbiotica]
          Length = 362

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 42/359 (11%), Positives = 107/359 (29%), Gaps = 23/359 (6%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66
           ++    ++    +           ++  ++K      +   ++Q       SS  E+++ 
Sbjct: 8   FIYRLSEIKERYNELKSSI--PAHRIYYSIKANPNIEILTFISQLGLKAEVSSPGELIIA 65

Query: 67  H-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
               F      Y    K  +    A     +     ++S+L+K     +++ K    RI 
Sbjct: 66  INAGFNPAYIVYGGPGKTIKDIDFAAEKGVNYFSLESLSELDKLDIVEKQIGKNFK-RIL 124

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN---VNGLMFHNNCENKSFLCFSAMLK 180
                +     +   P S+ G   ++           V G+  ++  +       +++++
Sbjct: 125 RLFIPNNNGRLNMMMPNSKFGITLEEVKNYVANGDNDVYGIHLYSGTQINETGFRASVIQ 184

Query: 181 NIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI 237
             +           ++++++ GGG+ +       K      K       ++   E G  +
Sbjct: 185 TNQIVSEIESIIGYKLKYVNYGGGLEWPFMR-SGKPIISPTKVEGILPDIESCFEFGRYL 243

Query: 238 VTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-------PDYLLYQESATIYPNTGPY-- 288
           V +   L T +LD+ E     +++ S+    +              +             
Sbjct: 244 VASCGILETEILDVKERNGYQILIISAGINILNGISASGRLIHQQPDFHVSNNKNNNIML 303

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPTIAVKN 346
              + G  C   D          +  GD ++  +   Y  N   + F            
Sbjct: 304 PTAIYGPLCTPVDYLTLNTLLPQLFQGDILTIPNCGAYAANTGISNFLMREPAQEITVE 362


>gi|307330569|ref|ZP_07609710.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces violaceusniger Tu 4113]
 gi|306883818|gb|EFN14863.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces violaceusniger Tu 4113]
          Length = 448

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 54/384 (14%), Positives = 111/384 (28%), Gaps = 46/384 (11%)

Query: 26  KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAY-NVAYKD 83
               V    A+K  A   +   L     G   +S  E+ L        +     + A   
Sbjct: 50  PGTPVLHAFAVKAAALVPVLRLLADEGLGCEVASPGELALARAAGVTPDRIVLDSPAKTP 109

Query: 84  CEIDAVLSNCDTIIFNTVSQLNKFKDKAQK---LHKKIGLRINPSVSYSKFILADPNRPF 140
            E+   L     +  +   +L++              +GLRINP V              
Sbjct: 110 EELREALDLGIALNADNPQELDRLGALVGDRADPPAPLGLRINPQVGGGSIDAMSTATAT 169

Query: 141 SRLGEKCKD--------KIESEIKNVNGLMFHNNCE----NKSFLCFSAMLKNIEKEFGH 188
           S+ G   +D        +  +E   +  L  H   +               +  E+  G 
Sbjct: 170 SKFGVALQDPGAREWVVRTFAERPWLTRLHAHVGSQGCPLELMAAGIRVAYELAEEINGA 229

Query: 189 FITQ-IEWISLGGGIHFTDKDYP----VKDFCQRLKEFSEKYS---VQIYLEPGEAIVTN 240
              Q I+ + +GGG+             +++ Q L+           ++  E G +++  
Sbjct: 230 VGRQQIDALDIGGGLPVNFASDEITPGYREYAQLLRTTVPGLFDGRYKLVTEFGRSLLAK 289

Query: 241 TTTLNTTVLD------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--------NTG 286
           +  +   V            + +     ++     P+    + +A            + G
Sbjct: 290 SGLVLARVEYAKSAGGRLIAVTHAGAQLATRTVFAPEAWPLRVTAYDAEGRPKAGGSSDG 349

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
                + G  C AGD+         +  GD +   D   Y  +    +N +  P I   +
Sbjct: 350 QVPQDIAGPCCFAGDLVARDRPLPELAAGDLVGLLDTGAYYFSNHFAYNSLPRPGIYGFD 409

Query: 347 VDGT-------IKAIREFSYNDYY 363
             G+           +  + ++  
Sbjct: 410 ATGSTGDEVRFATVRKPQTVDEIV 433


>gi|169835507|ref|ZP_02868695.1| diaminopimelate decarboxylase [candidate division TM7 single-cell
           isolate TM7a]
          Length = 256

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 48/245 (19%), Positives = 79/245 (32%), Gaps = 22/245 (8%)

Query: 143 LGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF----GHFITQIEWISL 198
           L +  K   +S      G   H   +      F   L  I K            +  +++
Sbjct: 6   LIDIVKRLNDSPYIEFKGFHTHIGSQIFQSAFFIFALDEIFKYLDRLKKELGIVVHTVNM 65

Query: 199 GGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI-----------YLEPGEAIVTNTTTLNTT 247
           GGG     K+       + +      Y+  +            +EPG +IV N  T    
Sbjct: 66  GGGFGVYYKNGDDPKPIEEVLSEIITYTEAMEIKYQIGFKELCIEPGRSIVGNAGTTLYE 125

Query: 248 VLDISENI--KNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT----AMVCGRSCLAGD 301
           V  I E +  K  V +D  +  ++   L   E      N    T      + G+ C +GD
Sbjct: 126 VGGIKETVGGKTYVFIDGGMSDNIRTALYQAEYEAGVVNKMEDTDTRDVTLAGKLCESGD 185

Query: 302 IFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYN 360
           I  +        K+GD ++      Y     + +N +  P +          A+R  SY 
Sbjct: 186 IIIQNGKLPKSTKVGDIVAVGTTGAYCYTMSSHYNRMVTPGVVFVKDGKAKVAVRRESYE 245

Query: 361 DYYNN 365
           D   N
Sbjct: 246 DLLRN 250


>gi|190360585|ref|NP_001121960.1| antizyme inhibitor 1 [Sus scrofa]
 gi|187372906|gb|ACD03180.1| antizyme inhibitor 1 [Sus scrofa]
          Length = 446

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 58/370 (15%), Positives = 112/370 (30%), Gaps = 30/370 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  K++        I     +K    +KC +   + + L     G   SS  E+ L
Sbjct: 40  FFVGDLGKIVKKHSQWQNIVAQ--IKPFYTVKCNSTPAVLEILAALGTGFACSSKTEMAL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             E     E   Y    K        +     I    +++   K      + K+ L I  
Sbjct: 98  VQELGVSPENIIYISPCKQVSQIKYAAKVGVNIMTCDNEVELKKIARNHPNAKVLLHIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             +              +      +  +     + G+ FH +   K    +   L +   
Sbjct: 158 EDNIGGEEGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARC 217

Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238
            F   G F   +  + +GGG      +   V      L    F E   ++I  EPG   V
Sbjct: 218 VFDMAGEFGFTMNMLDIGGGFTGTQFQLEEVNHVISPLLDVYFPEGSGIKIISEPGSYYV 277

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY---------------------QE 277
           ++  TL   ++                 +  P ++ Y                     + 
Sbjct: 278 SSAFTLAVNIIAKKVVENKFSSGVGKTGSDEPAFMYYLNDGVYGSFASKLSEDLNTIPEV 337

Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                 +   +T+ + G SC   D   E      + +GD + F+++   +++  + FN  
Sbjct: 338 HKKYKEDEPLFTSSLWGPSCDELDQIMENCLLPELNVGDWLIFDNMGADSLHEPSAFNDF 397

Query: 338 NMPTIAVKNV 347
             P I     
Sbjct: 398 QRPAIYYMMS 407


>gi|217423075|ref|ZP_03454577.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei
           576]
 gi|217393983|gb|EEC34003.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei
           576]
          Length = 419

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/356 (15%), Positives = 106/356 (29%), Gaps = 23/356 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIR---KNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSL 60
           P +L D Q+ L+N+          +    +L  A+K      +   L +  + G  + S 
Sbjct: 50  PVFLYDPQRALDNVARLQRALGDLQRGDFRLHYAMKANRFRPLLSELRRSPLFGIDACSP 109

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E+       F  E  +Y       +  A+L+    +  N  +        ++   ++IG
Sbjct: 110 EELREALACGFAPERISYTAHGMMPDEAALLAALPGVHVNCDTLSAIALLGSRSPGREIG 169

Query: 120 LRINPSVSYSKFILADPNRPF---SRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170
           +R+NP V          +      ++ G   +               V  L  H  C   
Sbjct: 170 IRVNPGVGIGYGDSERLSYAGAAVTKFGIYAEQFGAALELAARHGLAVTWLHCHAGCGYL 229

Query: 171 S-----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
                 F      L                  LG     TD+   ++ +   +       
Sbjct: 230 DAQLESFERVLDALDAFAARVPGLRGINLGGGLGLPHRATDRPLDLERWRAAVHARFGSR 289

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLY---QESATI 281
            + I +EPG+ I  +   L   V  +        +  +      +         +    +
Sbjct: 290 PLAIAIEPGDFIAKDAGMLVLRVAYVELKRNRRFVGLNGGFNLAIEPAFYDLPCEPVPCV 349

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                  +  V G    A D++G      PV+ GD I+  +  GY  +  +     
Sbjct: 350 RRPGPAQSVCVAGNINEALDVWGNDVSLPPVEPGDFIALLNAGGYASSMSSNHCLR 405


>gi|85708352|ref|ZP_01039418.1| diaminopimelate/ornithine decarboxylase [Erythrobacter sp. NAP1]
 gi|85689886|gb|EAQ29889.1| diaminopimelate/ornithine decarboxylase [Erythrobacter sp. NAP1]
          Length = 401

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 50/353 (14%), Positives = 91/353 (25%), Gaps = 26/353 (7%)

Query: 19  DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAY 77
             A Y  +    K+L A+K   A  + + L          +S+ EV L           +
Sbjct: 30  RAAKYFVEKFPGKVLYAVKANPAPDLIEVLWDAGVTHYDVASIAEVRLVRGLLPDANLCF 89

Query: 78  NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK------------AQKLHKKIGLRINPS 125
               K     A   +   +   ++  L + +              A  L   + LR++  
Sbjct: 90  MHPIKRRRAIAEAYHEHGVKTFSLDTLEELEKIVEACSDPETGEPATDLRLCVRLRVSSE 149

Query: 126 VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKE 185
            S     LA           +           + G+ FH   +  +   F   L      
Sbjct: 150 YSE--LSLASKFGCDLLEAPQLLQACRQHCDWL-GVCFHVGSQAMTPFAFVQALDRTRAA 206

Query: 186 FGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLN 245
                  I+ I +GGG                     + +         E        L 
Sbjct: 207 IAEASVVIDMIDVGGGFPSIYPGMEPPPLEDYFAIIHQHFYALPIAYNAELWCEPGRALC 266

Query: 246 TT----VLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-----YTAMVCGRS 296
                 ++ + +   N + ++      + D         +                 G +
Sbjct: 267 AEYSSMIVRVEKRRGNELYINDGAYGALYDAAHVSWRFPVNALEDDLRDAVEDFAFYGPT 326

Query: 297 CLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348
           C   D   G F     ++ GD I    +  Y    K  FNG     I +   +
Sbjct: 327 CDDADYMAGPFPLPGDIQAGDFIEIGVLGAYGAAMKTGFNGFGDAEIVIVEDE 379


>gi|167921577|ref|ZP_02508668.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei
           BCC215]
          Length = 419

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/356 (15%), Positives = 106/356 (29%), Gaps = 23/356 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIR---KNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSL 60
           P +L D Q+ L+N+          +    +L  A+K      +   L +  + G  + S 
Sbjct: 50  PVFLYDPQRALDNVARLQRALGDLQRGDFRLHYAMKANRFRPLLSELRRSPLFGIDACSP 109

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E+       F  E  +Y       +  A+L+    +  N  +        ++   ++IG
Sbjct: 110 EELREALACGFAPERISYTAHGMMPDEAALLAALPGVHVNCDTLSAIALLGSRSPGREIG 169

Query: 120 LRINPSVSYSKFILADPNRPF---SRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170
           +R+NP V          +      ++ G   +               V  L  H  C   
Sbjct: 170 IRVNPGVGIGYGDSERLSYAGAAVTKFGIYAEQFGAALELAARHGLAVTWLHCHAGCGYL 229

Query: 171 S-----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
                 F      L                  LG     TD+   ++ +   +       
Sbjct: 230 DAQLESFERVLDALDAFAARVPGLRGINLGGGLGLPHRATDRPLDLERWRAAVHARFGSR 289

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLY---QESATI 281
            + I +EPG+ I  +   L   V  +        +  +      +         +    +
Sbjct: 290 PLAIAIEPGDFIAKDAGMLVLRVAYVELKRNRRFVGLNGGFNLAIEPAFYDLPCEPVPCV 349

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                  +  V G    A D++G      PV+ GD I+  +  GY  +  +     
Sbjct: 350 RRPGPAQSVCVAGNINEALDVWGNDVSLPPVEPGDFIALLNAGGYASSMSSNHCLR 405


>gi|15858865|gb|AAL08050.1| ornithine decarboxylase-like protein variant 2 [Homo sapiens]
 gi|56202452|emb|CAI19355.1| arginine decarboxylase [Homo sapiens]
 gi|119627884|gb|EAX07479.1| arginine decarboxylase, isoform CRA_k [Homo sapiens]
          Length = 480

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 51/382 (13%), Positives = 118/382 (30%), Gaps = 57/382 (14%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++       +++    V+   A+KC ++ G+   L Q   G + ++  E+ L
Sbjct: 41  FFVADLGAIVR--KHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 98

Query: 66  G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             H              K        +     + +  +++   K        K+ L I  
Sbjct: 99  VQHIGIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKMVLCIAT 158

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S+S   L+       +      +  +     V G+ FH          ++  + +   
Sbjct: 159 DDSHSLSCLSLKFGVSLKSCRHLLENAKKHHVEVVGVSFHIGSGCPDPQAYAQSIADARL 218

Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPGE 235
            F        ++  + LGGG   T+      +    +        F E   V I+ E G 
Sbjct: 219 VFEMGTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEGCGVDIFAELGR 278

Query: 236 AIVTNTTTLNTTVLDI-------------------------------------------S 252
             VT+  T+  +++                                              
Sbjct: 279 YYVTSAFTVAVSIIAKKEVLLDQPGREAPLPPPHIATCAASEPSPPAEENGSTSKTIVYH 338

Query: 253 ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPV 312
            +     I +S +  ++    + Q+  +       Y++ + G +    D   E  +   +
Sbjct: 339 LDEGVYGIFNSVLFDNICPTPILQKKPSTEQP--LYSSSLWGPAVDGCDCVAEGLWLPQL 396

Query: 313 KIGDRISFEDVAGYNINRKNWF 334
            +GD + F+++  Y +   + F
Sbjct: 397 HVGDWLVFDNMGAYTVGMGSPF 418


>gi|53717037|ref|YP_106056.1| putative diaminopimelate decarboxylase [Burkholderia mallei ATCC
           23344]
 gi|67639826|ref|ZP_00438658.1| putative diaminopimelate decarboxylase [Burkholderia mallei GB8
           horse 4]
 gi|124381186|ref|YP_001025951.1| putative diaminopimelate decarboxylase [Burkholderia mallei NCTC
           10229]
 gi|126446956|ref|YP_001078041.1| putative diaminopimelate decarboxylase [Burkholderia mallei NCTC
           10247]
 gi|166999787|ref|ZP_02265617.1| putative diaminopimelate decarboxylase [Burkholderia mallei PRL-20]
 gi|237508192|ref|ZP_04520907.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei
           MSHR346]
 gi|254176386|ref|ZP_04883044.1| putative diaminopimelate decarboxylase [Burkholderia mallei ATCC
           10399]
 gi|254200911|ref|ZP_04907276.1| putative diaminopimelate decarboxylase [Burkholderia mallei FMH]
 gi|254204874|ref|ZP_04911227.1| putative diaminopimelate decarboxylase [Burkholderia mallei JHU]
 gi|52423007|gb|AAU46577.1| putative diaminopimelate decarboxylase [Burkholderia mallei ATCC
           23344]
 gi|126239810|gb|ABO02922.1| putative diaminopimelate decarboxylase [Burkholderia mallei NCTC
           10247]
 gi|147748523|gb|EDK55598.1| putative diaminopimelate decarboxylase [Burkholderia mallei FMH]
 gi|147754460|gb|EDK61524.1| putative diaminopimelate decarboxylase [Burkholderia mallei JHU]
 gi|160697428|gb|EDP87398.1| putative diaminopimelate decarboxylase [Burkholderia mallei ATCC
           10399]
 gi|235000397|gb|EEP49821.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei
           MSHR346]
 gi|238520434|gb|EEP83894.1| putative diaminopimelate decarboxylase [Burkholderia mallei GB8
           horse 4]
 gi|243064101|gb|EES46287.1| putative diaminopimelate decarboxylase [Burkholderia mallei PRL-20]
 gi|261826192|gb|ABM99332.2| putative diaminopimelate decarboxylase [Burkholderia mallei NCTC
           10229]
          Length = 419

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/356 (15%), Positives = 106/356 (29%), Gaps = 23/356 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIR---KNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSL 60
           P +L D Q+ L+N+          +    +L  A+K      +   L +  + G  + S 
Sbjct: 50  PVFLYDPQRALDNVARLQRALGDLQRGDFRLHYAMKANRFRPLLSELRRSPLFGIDACSP 109

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E+       F  E  +Y       +  A+L+    +  N  +        ++   ++IG
Sbjct: 110 EELREALACGFAPERISYTAHGMMPDEAALLAALPGVHVNCDTLSAIALLGSRSPGREIG 169

Query: 120 LRINPSVSYSKFILADPNRPF---SRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170
           +R+NP V          +      ++ G   +               V  L  H  C   
Sbjct: 170 IRVNPGVGIGYGDSERLSYAGAAVTKFGIYAEQFGAALELAARHGLAVTWLHCHAGCGYL 229

Query: 171 S-----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
                 F      L                  LG     TD+   ++ +   +       
Sbjct: 230 DAQLESFERVLDALDAFAARVPGLRGINLGGGLGLPHRATDRPLDLERWRAAVHARFGGR 289

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLY---QESATI 281
            + I +EPG+ I  +   L   V  +        +  +      +         +    +
Sbjct: 290 PLAIAIEPGDFIAKDAGMLVLRVAYVELKRNRRFVGLNGGFNLAIEPAFYDLPCEPVPCV 349

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                  +  V G    A D++G      PV+ GD I+  +  GY  +  +     
Sbjct: 350 RRPGPAQSVCVAGNINEALDVWGNDVSLPPVEPGDFIALLNAGGYASSMSSNHCLR 405


>gi|218134059|ref|ZP_03462863.1| hypothetical protein BACPEC_01949 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991434|gb|EEC57440.1| hypothetical protein BACPEC_01949 [Bacteroides pectinophilus ATCC
           43243]
          Length = 416

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 57/399 (14%), Positives = 116/399 (29%), Gaps = 56/399 (14%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ +  +L + L+T   I    G+ +L A+K      +   +++        S  E
Sbjct: 14  GTPSYIFNVDELESRLNTIKQILGE-GIDVLYAMKANPF--LVPVMSRLGMRFEVCSPGE 70

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAV----LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             +  +E    +    +   K+                    +V         A+K    
Sbjct: 71  FAICENEHVNMQDIVLSGVNKERADIEHVMDDCGGVGIYTVESVRHFQLLASMAEKRSTV 130

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
           I + +                    +      + E +  ++ G+  +   + K       
Sbjct: 131 IHVLLRV------TSGNQFGLDEEDIENIISKRDEFKYVDIRGIQCYTGTQKKKSDHIDK 184

Query: 178 MLKN----IEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKDFCQRLKEFSEKYS 226
            +       ++ +  +  + E    G G+  +         +Y +       K  + +  
Sbjct: 185 EIDWLDSLCDRLYEKYGYKAEEFEYGPGLFVSYFEPGVDNNNYDMLRALAA-KLDTIRDK 243

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH------------------ 268
             I LE G  I        T V DI  N +    +      H                  
Sbjct: 244 YHISLEMGRYIAATCGLFLTRVEDIKYNKEQHYCIVDGGINHINYYGQTMAMKLPVTEHI 303

Query: 269 -----------VPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDR 317
                      + D      +  +  + G     VCG  C  GD+  +      +KIGD 
Sbjct: 304 PMDVDASKTFAMSDACALLGNELVQKSEGTVHWNVCGSLCTVGDVIVKNLELTDLKIGDM 363

Query: 318 ISFEDVAGYNINRK-NWFNGINMPTIAVKNVDGTIKAIR 355
           + F ++  Y++      F   N+P I   +     + +R
Sbjct: 364 LVFHNIGAYSVTEGIYLFLSRNLPNIIEYSSKNGARLLR 402


>gi|254358992|ref|ZP_04975264.1| putative diaminopimelate decarboxylase [Burkholderia mallei
           2002721280]
 gi|148028179|gb|EDK86139.1| putative diaminopimelate decarboxylase [Burkholderia mallei
           2002721280]
          Length = 419

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 54/356 (15%), Positives = 106/356 (29%), Gaps = 23/356 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIR---KNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSL 60
           P +L D Q+ L+N+          +    +L  A+K      +   L +  + G  + S 
Sbjct: 50  PVFLYDPQRALDNVARLQRALGDLQRGDFRLHYAMKANRFRPLLSELRRSPLFGIDACSP 109

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E+       F  E  +Y       +  A+L+    +  N  +        ++   ++IG
Sbjct: 110 EELREALACGFAPERISYTAHGMMPDEAALLAALPGVHVNCDTLSAIALLGSRSPGREIG 169

Query: 120 LRINPSVSYSKFILADPNRPF---SRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170
           +R+NP V          +      ++ G   +               V  L  H  C   
Sbjct: 170 IRVNPGVGIGYGDSERLSYAGAAVTKFGIYAEQFGAALELAARHGLAVTWLHCHAGCGYL 229

Query: 171 S-----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
                 F      L                  LG     TD+   ++ +   +       
Sbjct: 230 DAQLESFERVLDALDAFAARVPGLRGINLGGGLGLPHRATDRPLDLERWRAAVHARFGGR 289

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLY---QESATI 281
            + + +EPG+ I  +   L   V  +        +  +      +         +    +
Sbjct: 290 PLALAIEPGDFIAKDAGMLVLRVAYVELKRNRRFVGLNGGFNLAIEPAFYDLPCEPVPCV 349

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                  +  V G    A D++G      PV+ GD I+  +  GY  +  +     
Sbjct: 350 RRPGPAQSVCVAGNINEALDVWGNDVSLPPVEPGDFIALLNAGGYASSMSSNHCLR 405


>gi|256395880|ref|YP_003117444.1| Orn/DAP/Arg decarboxylase 2 [Catenulispora acidiphila DSM 44928]
 gi|256362106|gb|ACU75603.1| Orn/DAP/Arg decarboxylase 2 [Catenulispora acidiphila DSM 44928]
          Length = 425

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/403 (13%), Positives = 109/403 (27%), Gaps = 42/403 (10%)

Query: 4   TPY--YLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           TP   ++ D Q +                V    A K      +   L ++  G   SS 
Sbjct: 15  TPVAAFV-DLQGIEQTAAELRAAWPRETEVLHAFAAKANPMVPILALLLRHGLGCEVSSP 73

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQK--LHK 116
            E+       F       +   K     AV       +  +   +L +            
Sbjct: 74  GELAQARAAGFPMARVVLDSPAKTQAELAVALRDGIALNIDNFEELERVDRLVADGAAAV 133

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFHNNCE 168
           ++G+RINP V              ++ G    D           +    +  +  H   +
Sbjct: 134 RVGVRINPQVGIGSIEAMSTAGRTTKFGIAMADPGNRQRLLAAYAARPWLRWVHVHVGSQ 193

Query: 169 ----NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY-PVKDFCQRLKEFSE 223
                 +    +  ++  ++       QIE I +GGG+            F   +    +
Sbjct: 194 GIPLELNAAGVAEAVRFAQEVNARRDGQIEGIDIGGGLPVDFSTDGDSPTFADHVAVLRD 253

Query: 224 KYS------VQIYLEPGEAIVTNTTTLNTTVLDISENI------KNLVIVDSSVEAHVPD 271
                     ++  E G +++T    + + V              +     ++     P 
Sbjct: 254 AAPELFTGGFKVVTEYGRSVMTKNGFIASRVEYTKRTGGRAIALTHAGAQVAARTVFAPK 313

Query: 272 YLLYQE----SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
               +        +          V G  C AGD+         +   D +   D   Y 
Sbjct: 314 SWPLRVLAYDRHGLPSTAELEVQDVAGPCCFAGDLVARERKLPRLATEDIVVVPDTGAYY 373

Query: 328 INRKNWFNGINMPTIA-VKNVDG---TIKAIR-EFSYNDYYNN 365
            +    +N + MP +   +  DG       +R   S ++    
Sbjct: 374 FSSPFQYNSLPMPPVFGFEVSDGDVVRFHVLRAAESLDEVVAR 416


>gi|134280746|ref|ZP_01767456.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei
           305]
 gi|134247768|gb|EBA47852.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei
           305]
          Length = 419

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 54/356 (15%), Positives = 106/356 (29%), Gaps = 23/356 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIR---KNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSL 60
           P +L D Q+ L+N+          +    +L  A+K      +   L +  + G  + S 
Sbjct: 50  PVFLYDPQRALDNVARLQRALGDLQRGDFRLHYAMKANRFRPLLSELRRSPLFGIDACSP 109

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E+       F  E  +Y       +  A+L+    +  N  +        ++   ++IG
Sbjct: 110 EELREALACGFAPERISYTAHGMMPDEAALLAALPGVHVNCDTLSAIALLGSRSPGREIG 169

Query: 120 LRINPSVSYSKFILADPNRPF---SRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170
           +R+NP V          +      ++ G   +               V  L  H  C   
Sbjct: 170 IRVNPGVGIGYGDSERLSYAGAAVTKFGIYAEQFGAALELAARHGLAVTWLHCHAGCGYL 229

Query: 171 S-----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
                 F      L                  LG     TD+   ++ +   +       
Sbjct: 230 DAQLESFERVLDALDAFAARVPGLRGINLGGGLGLPHRATDRPLDLERWRAAVHARFGGR 289

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLY---QESATI 281
            + + +EPG+ I  +   L   V  +        +  +      +         +    +
Sbjct: 290 PLALAIEPGDFIAKDAGMLVLRVAYVELKRNRRFVGLNGGFNLAIEPAFYDLPCEPVPCV 349

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                  +  V G    A D++G      PV+ GD I+  +  GY  +  +     
Sbjct: 350 RRPGPAQSVCVAGNINEALDVWGNDVSLPPVEPGDFIALLNAGGYASSMSSNHCLR 405


>gi|167896953|ref|ZP_02484355.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei
           7894]
          Length = 419

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/356 (15%), Positives = 106/356 (29%), Gaps = 23/356 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIR---KNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSL 60
           P +L D Q+ L+N+          +    +L  A+K      +   L +  + G  + S 
Sbjct: 50  PVFLYDPQRALDNVARLQRALGDLQRGDFRLHYAMKANRFRPLLSELRRSPLFGIDACSP 109

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E+       F  E  +Y       +  A+L+    +  N  +        ++   ++IG
Sbjct: 110 EELREALACGFAPERISYTAHGMMPDEAALLAALPGVHVNCDTLSAIALLGSRSPGREIG 169

Query: 120 LRINPSVSYSKFILADPNRPF---SRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170
           +R+NP V          +      ++ G   +               V  L  H  C   
Sbjct: 170 IRVNPGVGIGYGDSERLSYAGAAVTKFGIYAEQFGAALELAARHGLAVTWLHCHAGCGYL 229

Query: 171 S-----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
                 F      L                  LG     TD+   ++ +   +       
Sbjct: 230 DAQLESFERVLDALDAFAARVPGLRGINLGGGLGLPHRATDRPLDLERWRAAVHARFGSR 289

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLY---QESATI 281
            + I +EPG+ I  +   L   V  +        +  +      +         +    +
Sbjct: 290 PLAIAIEPGDFIAKDAGMLVLRVAYVELKRNRRFVGLNGGFNLAIEPAFYDLPCEPVPCV 349

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                  +  V G    A D++G      PV+ GD I+  +  GY  +  +     
Sbjct: 350 RRPGPAQSVCVAGNINEALDVWGNDVSLPPVEPGDFIALLNAGGYASSMSSNHCLR 405


>gi|291548849|emb|CBL25111.1| Diaminopimelate decarboxylase [Ruminococcus torques L2-14]
          Length = 408

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 52/394 (13%), Positives = 110/394 (27%), Gaps = 43/394 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D   L    +          + L  A+K          + Q+ D     S+ E
Sbjct: 14  GTPLYVFDLDILKEQTERIRAGF-GPEINLCYAMKANPFLT--GYMAQWSDRIEVCSMGE 70

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEID----AVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             +  + +   E    +   K  +      A   N       +      F + +++  + 
Sbjct: 71  FRICRKLQVPPEKLFISGVMKKRDDIREILAYCGNRCAYTVESPLHFQYFVEWSEEHPED 130

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
             LR+ P ++       D +     L +K K+    E + ++          K       
Sbjct: 131 GILRLYPRLTSGNQFGMDEDTVLEIL-KKAKELPGIEAEGIHYFSGTQKKNLKRHQKELT 189

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL-------KEFSEKYSVQIY 230
            L    K+       ++ +  G G           +  +            + ++   + 
Sbjct: 190 YLDEFLKKAAEEQIDVKCLEYGSGTAVPYFRDKTAETFEETGLKGLQDAVKAMQWKGHVT 249

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL----LYQESATIYPNT- 285
           +E G A+        T V D   +      +       +        +Y+    + P   
Sbjct: 250 VELGRALAAMCGYYLTKVEDTKTSDGIHYCIVDGGCHQINYDGQIKGMYEPYVKVLPKEV 309

Query: 286 -------------GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY----NI 328
                           T  VCG  C   D+       + ++ G  + FE    Y     +
Sbjct: 310 SMKDAEDSEDKNTEEKTWKVCGSLCTLNDVLCNEITLRGLEKGSILVFERTGAYSAMEGM 369

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIR--EFSYN 360
                F    +P + + + +      R  + +Y 
Sbjct: 370 AL---FLSHELPGVVLYSEEEGWIQARVQQETYE 400


>gi|167818500|ref|ZP_02450180.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei
           91]
          Length = 419

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 54/356 (15%), Positives = 106/356 (29%), Gaps = 23/356 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIR---KNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSL 60
           P +L D Q+ L+N+          +    +L  A+K      +   L +  + G  + S 
Sbjct: 50  PVFLYDPQRALDNVARLQRALGDLQRGDFRLHYAMKANRFRPLLSELRRSPLFGIDACSP 109

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E+       F  E  +Y       +  A+L+    +  N  +        ++   ++IG
Sbjct: 110 EELREALACGFAPERISYTAHGMMPDEAALLAALPGVHVNCDTLSAIALLGSRSPGREIG 169

Query: 120 LRINPSVSYSKFILADPNRPF---SRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170
           +R+NP V          +      ++ G   +               V  L  H  C   
Sbjct: 170 IRVNPGVGIGYGDSERLSYAGAAVTKFGIYAEQFGAALELAARHGLAVTWLHCHAGCGYL 229

Query: 171 S-----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
                 F      L                  LG     TD+   ++ +   +       
Sbjct: 230 DAQLESFERVLGALDAFAARVPGLRGINLGGGLGLPHRATDRPLDLERWRAAVHARFGGR 289

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLY---QESATI 281
            + + +EPG+ I  +   L   V  +        +  +      +         +    +
Sbjct: 290 PLALAIEPGDFIAKDAGMLVLRVAYVELKRNRRFVGLNGGFNLAIEPAFYDLPCEPVPCV 349

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                  +  V G    A D++G      PV+ GD I+  +  GY  +  +     
Sbjct: 350 RRPGPAQSVCVAGNINEALDVWGNDVSLPPVEPGDFIALLNAGGYASSMSSNHCLR 405


>gi|53721338|ref|YP_110323.1| diaminopimelate decarboxylase [Burkholderia pseudomallei K96243]
 gi|126444939|ref|YP_001061533.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei
           668]
 gi|126455535|ref|YP_001074474.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei
           1106a]
 gi|167741322|ref|ZP_02414096.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei
           14]
 gi|167848398|ref|ZP_02473906.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei
           B7210]
 gi|167913634|ref|ZP_02500725.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei
           112]
 gi|242311330|ref|ZP_04810347.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei
           1106b]
 gi|254189383|ref|ZP_04895893.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254195342|ref|ZP_04901770.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei
           S13]
 gi|254262869|ref|ZP_04953734.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei
           1710a]
 gi|254299440|ref|ZP_04966889.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei
           406e]
 gi|52211752|emb|CAH37751.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei
           K96243]
 gi|126224430|gb|ABN87935.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei
           668]
 gi|126229303|gb|ABN92716.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei
           1106a]
 gi|157809452|gb|EDO86622.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei
           406e]
 gi|157937061|gb|EDO92731.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei
           Pasteur 52237]
 gi|169652089|gb|EDS84782.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei
           S13]
 gi|242134569|gb|EES20972.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei
           1106b]
 gi|254213871|gb|EET03256.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei
           1710a]
          Length = 419

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/356 (15%), Positives = 106/356 (29%), Gaps = 23/356 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIR---KNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSL 60
           P +L D Q+ L+N+          +    +L  A+K      +   L +  + G  + S 
Sbjct: 50  PVFLYDPQRALDNVARLQRALGDLQRGDFRLHYAMKANRFRPLLSELRRSPLFGIDACSP 109

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E+       F  E  +Y       +  A+L+    +  N  +        ++   ++IG
Sbjct: 110 EELREALACGFAPERISYTAHGMMPDEAALLAALPGVHVNCDTLSAIALLGSRSPGREIG 169

Query: 120 LRINPSVSYSKFILADPNRPF---SRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170
           +R+NP V          +      ++ G   +               V  L  H  C   
Sbjct: 170 IRVNPGVGIGYGDSERLSYAGAAVTKFGIYAEQFGAALELAARHGLAVTWLHCHAGCGYL 229

Query: 171 S-----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
                 F      L                  LG     TD+   ++ +   +       
Sbjct: 230 DAQLESFERVLDALDAFAARVPGLRGINLGGGLGLPHRATDRPLDLERWRAAVHARFGGR 289

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLY---QESATI 281
            + I +EPG+ I  +   L   V  +        +  +      +         +    +
Sbjct: 290 PLAIAIEPGDFIAKDAGMLVLRVAYVELKRNRRFVGLNGGFNLAIEPAFYDLPCEPVPCV 349

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                  +  V G    A D++G      PV+ GD I+  +  GY  +  +     
Sbjct: 350 RRPGPAQSVCVAGNINEALDVWGNDVSLPPVEPGDFIALLNAGGYASSMSSNHCLR 405


>gi|167617008|ref|ZP_02385639.1| diaminopimelate decarboxylase, putative [Burkholderia thailandensis
           Bt4]
 gi|257140913|ref|ZP_05589175.1| diaminopimelate decarboxylase, putative [Burkholderia thailandensis
           E264]
          Length = 420

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 47/356 (13%), Positives = 101/356 (28%), Gaps = 23/356 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIR---KNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSL 60
           P +L D Q+ ++N+          +     +  A+K      +   L +  + G  + S 
Sbjct: 51  PVFLYDPQRAVDNVARLQRALGDLQRGDFHVYYAMKANRFRPLLSELRRSPIFGIDACSP 110

Query: 61  YEVMLGHE-KFGGETHAYNV--AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E  +Y       D            +  +T+S +     ++      
Sbjct: 111 EELREALACGFAPERISYTAHGMMPDEAALLAALPDVHVNCDTLSAIALLGSRSPGREIG 170

Query: 118 IGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIKN------VNGLMFHNNC--- 167
           I +     + Y             ++ G   +    +          V  L  H  C   
Sbjct: 171 IRVNPGVGIGYGDSERLSYAGATITKFGIYAEQFGAALELAARHGLTVTWLHCHAGCGYL 230

Query: 168 --ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
             +  SF      L                  LG     TD+   ++ +   +       
Sbjct: 231 DAQLDSFERVLDALDAFVARAPGLRGINLGGGLGLPHRATDRPLDLERWRAAVHARFGGR 290

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLY---QESATI 281
            + + +EPG+ I  +   L   V  +        +  +      +         +    +
Sbjct: 291 PLALAIEPGDFIAKDAGMLVLRVAYVELKRNRRFVGLNGGFNLAIEPAFYDLPCEPVPCV 350

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                  +  + G    A D++G+     PV+ GD ++  +  GY  +  +     
Sbjct: 351 RRPGPTQSVCLAGNINEALDVWGDDVSLPPVEPGDFVALLNAGGYASSMSSNHCLR 406


>gi|220926699|ref|YP_002502001.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium nodulans ORS 2060]
 gi|219951306|gb|ACL61698.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium nodulans ORS 2060]
          Length = 403

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/386 (9%), Positives = 89/386 (23%), Gaps = 39/386 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            +L D   L              G     A+K      +   L  ++ G   +S  E++ 
Sbjct: 23  AFLHDLSALGEQARALRAPLP-PGTDFFYAVKANNDPQVLRALAPHVAGFEVASAGEIVR 81

Query: 66  GHEKFG-GETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
             +  G           +             + +   +   +      A +    I + +
Sbjct: 82  VRQAVGSAARIVMGGPARTEGDIRTLLAFGVERLHVESAQAMRLANAVAARAGATIPVLL 141

Query: 123 NPSVS--------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174
             +++                     S + +      +       G  FH    N+    
Sbjct: 142 RVNLAGPVPGATLTMGGAATQFGIEQSAIPDALTILRDCRALRFEGFHFHTVSNNRDAAA 201

Query: 175 FSAML----KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY 230
            +A+                  +  ++LGGG      D   +            ++  + 
Sbjct: 202 HAALCTAELAMARGLAAEHGLDLRIVNLGGGWGVDYADPDWRFDVIGFARALTPHAKGLR 261

Query: 231 LE--PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP---DYLLYQESATIYPNT 285
           L+   G  +          ++D+ +       +      H      +        +    
Sbjct: 262 LQFECGRIVAAYHAAYVCEIIDLKQVHGRAFALLRGGTHHFRLPSSWSHNHPFEILPREE 321

Query: 286 GPYTAM----------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-F 334
             +             + G  C   D+          +IGD +  +    Y  +  +  F
Sbjct: 322 WSHPWPRPELLDTKLTLAGELCTPKDVLARDVPVPRARIGDLVCLQMAGAYGWDISHHDF 381

Query: 335 NGINMPTIAVKNVDGTIKAIREFSYN 360
                P     +           +  
Sbjct: 382 LCHARPERIFLSSS-------RETTE 400


>gi|167905336|ref|ZP_02492541.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei
           NCTC 13177]
          Length = 419

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/356 (15%), Positives = 107/356 (30%), Gaps = 23/356 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIR---KNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSL 60
           P +L D Q+ L+N+          +    +L  A+K      +   L +  + G  + S 
Sbjct: 50  PVFLYDPQRALDNVARLQRALGDLQRGDFRLHYAMKANRFRPLLSELRRSPLFGIDACSP 109

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E+       F  E  +Y       +  A+L+    +  N  +        ++   ++IG
Sbjct: 110 EELREALACGFAPERISYTAHGMMPDEAALLAALPGVHVNCDTLSAIALLGSRSPGREIG 169

Query: 120 LRINPSVSYSKFILADPNRPF---SRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170
           +R+NPSV          +      ++ G   +               V  L  H  C   
Sbjct: 170 IRVNPSVGIGYGDSERLSYAGAAVTKFGIYAEQFGAALELAARHGLAVTWLHCHAGCGYL 229

Query: 171 S-----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
                 F      L                  LG     TD+   ++ +   +       
Sbjct: 230 DAQLESFERVLDALDAFAAHVPGLRGINLGGGLGLPHRATDRPLDLERWRAAVHARFGGR 289

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLY---QESATI 281
            + + +EPG+ I  +   L   V  +        +  +      +         +    +
Sbjct: 290 PLALAIEPGDFIAKDAGMLVLRVAYVELKRNRRFVGLNGGFNLAIEPAFYDLPCEPVPCV 349

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                  +  V G    A D++G      PV+ GD I+  +  GY  +  +     
Sbjct: 350 RRPGPAQSVCVAGNINEALDVWGNDVSLPPVEPGDFIALLNAGGYASSMSSNHCLR 405


>gi|167578905|ref|ZP_02371779.1| diaminopimelate decarboxylase, putative [Burkholderia thailandensis
           TXDOH]
          Length = 420

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 41/357 (11%), Positives = 99/357 (27%), Gaps = 25/357 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIR---KNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSL 60
           P +L D Q+ ++N+          +    ++  A+K      +   L +  + G  + S 
Sbjct: 51  PVFLYDPQRAVDNVARLQRALGDLQRGDFRVYYAMKANRFRPLLSELRRSPIFGIDACSP 110

Query: 61  YEVMLGHE-KFGGETHAYNV--AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E  +Y       D            +  +T+S +     ++      
Sbjct: 111 EELREALACGFAPERISYTAHGMMPDEAALLAALPDVHVNCDTLSAIALLGSRSPGREIG 170

Query: 118 IGLRINPSVSYSKFILADPNRPF-SRLGEKCKD----KIESEIKNVNGLMFHNNCENKSF 172
           I +     + Y             ++ G   +        +    +     H +      
Sbjct: 171 IRVNPGVGIGYGDSERLSYAGATVTKFGIYAEQFGAALELAARHGLTVTWLHCHAGCGYL 230

Query: 173 LCFSAMLKNIEKEFGHF--------ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
                  + +      F           +           TD+   ++ +   +      
Sbjct: 231 DAQLDSFERVLDALDAFVARAPALRGINLGGGLGLP-HRATDRPLDLERWRAAVHARFGG 289

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLY---QESAT 280
             + I +EPG+ I  +   L   V  +        +  +      +         +    
Sbjct: 290 RPLAIAIEPGDFIAKDAGMLVLRVAYVELKRNRRFVGLNGGFNLAIEPAFYDLPCEPVPC 349

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
           +       +  + G    A D++G+     PV+ GD ++  +  GY  +  +     
Sbjct: 350 VRRPGPAQSVCLAGNINEALDVWGDDVSLPPVEPGDFVALLNAGGYASSMSSNHCLR 406


>gi|94502385|ref|ZP_01308844.1| diaminopimelate decarboxylase [Candidatus Sulcia muelleri str. Hc
           (Homalodisca coagulata)]
 gi|94451057|gb|EAT14023.1| diaminopimelate decarboxylase [Candidatus Sulcia muelleri str. Hc
           (Homalodisca coagulata)]
          Length = 225

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 68/220 (30%), Gaps = 12/220 (5%)

Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ 216
            V G+  H   +      F      +      F  ++++I  G G          K    
Sbjct: 2   KVEGIHMHTGSDIIDLEVFLQGADILLNVASSFN-ELKYIDFGSGFKVPYHKNDTKTDLD 60

Query: 217 RLKEFSEKY------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-LVIVDSSVEAHV 269
            L  F +K       +++I  EPG+ +V+ +      V  I          VDS     +
Sbjct: 61  MLGVFFKKKISRVCKNIKIVFEPGKFLVSESGYFIVKVNVIKHTTSTVFACVDSGFNHFI 120

Query: 270 PDYLLYQESATIY---PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
                           P+    +  V G  C + D F        ++ GD + F +   Y
Sbjct: 121 RPMFYDSYHQIDNLSNPSGKLRSYTVVGYICES-DTFCVNIKINEIREGDILCFRNAGAY 179

Query: 327 NINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNL 366
             +  + +N    P+  +   + +    R  +  D    +
Sbjct: 180 CFSMSSNYNSRYRPSEVIIYNNKSFLIRRRENMQDLLKKM 219


>gi|301772966|ref|XP_002921899.1| PREDICTED: arginine decarboxylase-like [Ailuropoda melanoleuca]
          Length = 460

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 49/358 (13%), Positives = 113/358 (31%), Gaps = 33/358 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++       +++    V+    +KC ++ G+   L +   G + ++  E+ L
Sbjct: 41  FFVADLGTVVR--KHFCFLKCLPRVRPFYTVKCNSSPGVLKVLAELGLGFSCANKAEMEL 98

Query: 66  G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                            K        +     + +  +++   K        K+ L I  
Sbjct: 99  VQRIGVPASKIICANPCKQIAQIKYAAKHGVRLLSFDNEVELAKVVKSHPSAKMVLCIAT 158

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S S   L+       +      +  +     V G+ FH          ++  + +   
Sbjct: 159 DDSRSLTPLSFKFGATLKSCRHLLENAKRSHVEVVGVSFHVGSGCPDLHAYTQSIADARL 218

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPGE 235
            F         +  + LGGG    +      +    +        F E   V I    G 
Sbjct: 219 VFEMGAELGHGMHILDLGGGFPGLEGAKVRFEEIASVINSALDLYFPEGCGVDILARLGR 278

Query: 236 AIVTNTTTLNTTVL-------DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP- 287
             VT+  TL  +++       D     +       ++  H+ + +    ++ ++ NT P 
Sbjct: 279 YYVTSAFTLAVSIIAKKEVLLDQPGREEENGSTPKTIVYHLGEGVYGIFNSVLFDNTCPT 338

Query: 288 -------------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                        Y++ + G      D   E  +   + +GD + FE++  Y +   +
Sbjct: 339 PILQKKSSAEQPLYSSSLWGPVADGCDCVAEGLWLPQLHVGDWLVFENMGAYTVGMAS 396


>gi|260911532|ref|ZP_05918118.1| carboxynorspermidine decarboxylase [Prevotella sp. oral taxon 472
           str. F0295]
 gi|260634322|gb|EEX52426.1| carboxynorspermidine decarboxylase [Prevotella sp. oral taxon 472
           str. F0295]
          Length = 201

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 13/200 (6%)

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-QIYLEPGEAIV 238
            +IE +F  +   ++WI+ GGG   T KDY V+     L+ F E+Y   Q+ LEPG A  
Sbjct: 1   MHIESKFSGWFPALKWINFGGGHLMTRKDYDVELLINTLRSFKERYPHLQVILEPGSAFA 60

Query: 239 TNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPN-----------TG 286
             T  L   ++D+ E+      + + S   H+PD L       +                
Sbjct: 61  WQTGPLVAQIVDVVEDKGIQTAILNVSFTCHMPDCLEMPYQPAVRNARSLELEAAVNGAS 120

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
                + G SCL+GD  G + F+  + IG+ + FED+  Y   + N FNGI  P++A+  
Sbjct: 121 KNIYRLGGNSCLSGDFMGLWQFDHALTIGENVIFEDMIHYTTVKTNMFNGITHPSLAIVR 180

Query: 347 VDGTIKAIREFSYNDYYNNL 366
             G ++ +R + Y DY   +
Sbjct: 181 TSGELEMLRTYGYEDYKARM 200


>gi|73974239|ref|XP_858736.1| PREDICTED: similar to ornithine decarboxylase antizyme inhibitor
           isoform 10 [Canis familiaris]
          Length = 449

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 58/373 (15%), Positives = 115/373 (30%), Gaps = 33/373 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  K++        I     +K    +KC +   + + L     G   SS  E+ L
Sbjct: 40  FFVGDLGKIVKKHSQWQNIVAQ--IKPFYTVKCNSTPAVLEILAALGTGFACSSKTEMAL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             E     E   Y    K        +          +++   K      + K+ L I  
Sbjct: 98  VQELGVSPENIIYISPCKQVSQIKYAAKIGVNTMTCDNEVELKKIARNHPNAKVLLHIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             +              +      +  +     + G+ FH +   K    +   L +   
Sbjct: 158 EDNIGGEEGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARC 217

Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238
            F   G F   +  + +GGG      +   V      L    F E   ++I  EPG   V
Sbjct: 218 VFDMAGEFGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDVYFPEGSGIKIISEPGSYYV 277

Query: 239 TNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDYLLYQ-------------------- 276
           ++  TL   ++   ++    +         +  P ++ Y                     
Sbjct: 278 SSAFTLAVNIIAKKVAFQKCHTNSYPKKTGSDEPAFMYYMNDGIYGSFASKLSEDLNTIP 337

Query: 277 --ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
               A+   +   +T+ + G SC   D   E      + +GD + F+++   +++  + F
Sbjct: 338 EVHKASCKKDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSLHEPSAF 397

Query: 335 NGINMPTIAVKNV 347
           N    P I     
Sbjct: 398 NDFQRPAIYYMMS 410


>gi|257413466|ref|ZP_05591663.1| diaminopimelate decarboxylase [Roseburia intestinalis L1-82]
 gi|257203425|gb|EEV01710.1| diaminopimelate decarboxylase [Roseburia intestinalis L1-82]
          Length = 278

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 34/256 (13%), Positives = 75/256 (29%), Gaps = 17/256 (6%)

Query: 126 VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-GLMFHNNCENKSFLCFSAMLKNIEK 184
           +                 G K   +  ++   V+  L  +             + + + +
Sbjct: 6   MDNPGDAKYGFTHEQIIEGFKILKEKGAKHFGVHAFLASNTVTNEYYPKLARQLFELVVE 65

Query: 185 EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS-----------VQIYLEP 233
                   I++I+L GG+          +  + + +  ++             + IY E 
Sbjct: 66  LRDKTGCDIQFINLSGGVGVPYTPDQTPNDIRVIGQGVKEAFEEILVPAGLGNISIYTEM 125

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----YT 289
           G  ++     L T  +      K  + VD+     +   +                  + 
Sbjct: 126 GRFMLAPYGCLVTKAIHEKHTYKEYIGVDACAVNLMRPAIYGAYHHITVMGKEDEPCDHK 185

Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349
             V G  C   D F        + +GD +   D   +  +    +NG       +   DG
Sbjct: 186 YDVTGSLCENCDKFAIDRMLPKIDMGDLLVIHDAGAHGFSMGYNYNGKLRSAEVLLKEDG 245

Query: 350 TIKAIRE-FSYNDYYN 364
           + + IR   + +DY+ 
Sbjct: 246 STQLIRRAETPDDYFR 261


>gi|294676050|ref|YP_003576665.1| lysine/ornithine decarboxylase [Rhodobacter capsulatus SB 1003]
 gi|294474870|gb|ADE84258.1| lysine/ornithine decarboxylase [Rhodobacter capsulatus SB 1003]
          Length = 381

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 48/355 (13%), Positives = 96/355 (27%), Gaps = 19/355 (5%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFD-TLNQYMDGTTSSSLYEV 63
           P  +     L       L         +  A+K      +    +   + G   +S +E+
Sbjct: 23  PVLVFSPTALQATARRFLKGFPGV---VTYAVKSNPDEMVIQNLVAAGVKGFDVASPFEI 79

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
            L      G    Y+   +  E  A         ++  S+    K       +K  + + 
Sbjct: 80  DLIRRLAPGAALHYHNPVRGREEIAHAVRAGVKTWSVDSRSELDKLIEMVPAEKCEISVR 139

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-VNGLMFHNNCENKSFLCFSAMLKNI 182
             +           +  +      +    +     +  L FH   +      + A +   
Sbjct: 140 FKLPVQGAAYNFGAKFGATADLAAELLRRAADAGFIPSLTFHPGTQCTDPAAWEAYILVA 199

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK-------EFSEKYSVQIYLEPGE 235
            +       +   +++GGG     K  P                E        +  EPG 
Sbjct: 200 SEICATAGVRAHRLNVGGGFPNHRKMGPAPVLEDIFALIDRATTEAFGSDRPILVCEPGR 259

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY------T 289
            +V +  T  T V  + ++    +             +   E   ++   G         
Sbjct: 260 GLVGDAFTHITKVKALRDDTHVFLNDGVYGGLAELPLIGNIERIEVWSPEGFERGGDMVE 319

Query: 290 AMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343
            +V G +C + D   G+      +  GD + F  +  Y       FNG     I 
Sbjct: 320 RIVFGPTCDSVDRLPGDVALPAELSEGDYVVFHGMGAYCSATNTRFNGFGQMEIV 374


>gi|167826885|ref|ZP_02458356.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei
           9]
 gi|226194830|ref|ZP_03790422.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei
           Pakistan 9]
 gi|225933174|gb|EEH29169.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei
           Pakistan 9]
          Length = 419

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 54/356 (15%), Positives = 105/356 (29%), Gaps = 23/356 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIR---KNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSL 60
           P +L D Q+ L+N+          +    +L  A+K      +   L +  + G  + S 
Sbjct: 50  PVFLYDPQRALDNVARLQRALGDLQRGDFRLHYAMKANRFRPLLSELRRSPLFGIDACSP 109

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E+       F  E  +Y       +  A+L+    +  N  +        ++   ++IG
Sbjct: 110 EELREALACGFAPERISYTAHGMMPDEAALLAALPGVHVNCDTLSAIALLGSRSPGREIG 169

Query: 120 LRINPSVSYSKFILADPNRPF---SRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170
           +R+NP V          +      ++ G   +               V  L  H  C   
Sbjct: 170 IRVNPGVGIGYGDSERLSYAGAAVTKFGIYAEQFGAALELAARHGLAVTWLHCHAGCGYL 229

Query: 171 S-----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
                 F      L                  LG     TD+   ++ +   +       
Sbjct: 230 DAQLESFERVLDALDAFAARVPGLRGINLGGGLGLPHRATDRPLDLERWRAAVHARFGGR 289

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLY---QESATI 281
            + I +EPG+ I  +   L   V  +        +  +      +         +    +
Sbjct: 290 PLAIAIEPGDFIAKDAGMLVLRVAYVELKRNRRFVGLNGGFNLAIEPAFYDLPCEPVPCV 349

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                  +  V G    A D++       PV+ GD I+  +  GY  +  +     
Sbjct: 350 RRPGPAQSVCVAGNINEALDVWCNDVSLPPVEPGDFIALLNAGGYASSMSSNHCLR 405


>gi|167722329|ref|ZP_02405565.1| putative diaminopimelate decarboxylase [Burkholderia pseudomallei
           DM98]
          Length = 419

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 55/356 (15%), Positives = 107/356 (30%), Gaps = 23/356 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIR---KNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSL 60
           P +L D Q+ L+N+          ++   +L  A+K      +   L +  + G  + S 
Sbjct: 50  PVFLYDPQRALDNVARLQRALGDLQHGDFRLHYAMKANRFRPLLSELRRSPLFGIDACSP 109

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E+       F  E  +Y       +  A+L+    +  N  +        ++   ++IG
Sbjct: 110 EELREALACGFAPERISYTAHGMMPDEAALLAALPGVHVNCDTLSAIALLGSRSPGREIG 169

Query: 120 LRINPSVSYSKFILADPNRPF---SRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170
           +R+NP V          +      ++ G   +               V  L  H  C   
Sbjct: 170 IRVNPGVGIGYGDSERLSYAGAAVTKFGIYAEQFGAALELAARHGLAVTWLHCHAGCGYL 229

Query: 171 S-----FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
                 F      L                  LG     TD+   ++ +   +       
Sbjct: 230 DAQLESFERVLDALDAFAARVPGLRGINLGGGLGLPHRATDRPLDLERWRAAVHARFGGR 289

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLY---QESATI 281
            + I +EPG+ I  +   L   V  +        +  +      +         +    +
Sbjct: 290 PLAIAIEPGDFIAKDAGMLVLRVAYVELKRNRRFVGLNGGFNLAIEPAFYDLPCEPVPCV 349

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                  +  V G    A D++G      PV+ GD I+  +  GY  +  +     
Sbjct: 350 RRPGPAQSVCVAGNINEALDVWGNDVSLPPVEPGDFIALLNAGGYASSMSSNHCLR 405


>gi|307253176|ref|ZP_07535054.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306859361|gb|EFM91396.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 236

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 67/227 (29%), Gaps = 13/227 (5%)

Query: 150 KIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTD 206
                   + G+  H   +      F      +    ++      ++  + LGGG+    
Sbjct: 5   AKTLPNVKITGMDCHIGSQLTELQPFLDATDRLIVLMEQLKEDGIELHHLDLGGGLGVPY 64

Query: 207 KDYPVKDFCQRLKEFSEKYSV----QIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIV 261
                    +  K   EK       +I LEPG AI  N   L T V  +     +N  IV
Sbjct: 65  NGEEPPHPTEYAKALLEKLKGYADLEIILEPGRAITANAGILVTKVEYLKANEDRNFAIV 124

Query: 262 DSSVEAHVPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDR 317
           D+ +   +   L          +           V G  C   D  G+      ++ GD 
Sbjct: 125 DTGMNDMIRPALYEAYMQITEVDQSLSREKAVYDVVGPICETSDFLGKDRELA-IEQGDL 183

Query: 318 ISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           I+      Y     + +N        + + D         S+ D + 
Sbjct: 184 IAMRSAGAYGAAMSSTYNSRPQAVEIMVDGDQAYLIKARASFADLWR 230


>gi|297200175|ref|ZP_06917572.1| diaminopimelate decarboxylase [Streptomyces sviceus ATCC 29083]
 gi|197713374|gb|EDY57408.1| diaminopimelate decarboxylase [Streptomyces sviceus ATCC 29083]
          Length = 472

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 56/392 (14%), Positives = 111/392 (28%), Gaps = 51/392 (13%)

Query: 3   KTPYY-LIDKQKLLNNLDTALYIRKN-----AGVKLLLALKCFAAWGMFDTLNQYMDGTT 56
            TP   L+D   +  +                 V    A+K      +   L +   G  
Sbjct: 31  DTPVVGLLDVTGIRESAAELRAAFDGVTAPGTPVLHAFAVKASPLVPVLRLLREEGIGAE 90

Query: 57  SSSLYEVMLGHE-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114
            +S  E+ L        +     + A    E+   L+    +  +   +L++        
Sbjct: 91  VASPGELALARAAGLSPDRTVLDSPAKTPSELREALALGIAVNADNPQELDRIDGLMLPH 150

Query: 115 HK-------------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD--------KIES 153
                           +G+R+NP V              S+ G   +D        +   
Sbjct: 151 SPKGMGGAPMAVSRSPLGIRVNPQVGGGSIGATSTATATSKFGVALRDEGAREWVVRAYL 210

Query: 154 EIKNVNGLMFHNNCE----NKSFLCFSAMLKNIEKEFGHFI-TQIEWISLGGGIHFTDKD 208
           +   ++ L  H   +    +      +      E+        QI+ I +GGG+      
Sbjct: 211 DRPWLSRLHAHTGSQGIPLSLMTQGVAETYALAEEINRRIGRPQIDTIDIGGGLPVNFAS 270

Query: 209 YPVKDFCQRLKEFSEKY-------SVQIYLEPGEAIVTNTTTLNTTVLD------ISENI 255
                          +           +  E G +++    T+   V            +
Sbjct: 271 DVTTPTYAEYARALREAVPGLFDGRYGLVTEFGRSLLAKHGTIVARVEYAKSAGGRPIAV 330

Query: 256 KNLVIVDSSVEAHVP---DYLLYQESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKP 311
            +  +  ++   +VP      +    A   P +GP     V G +C AGD+  E      
Sbjct: 331 THAGVQVATRTVYVPGSWPLRIAAYDAKGRPRSGPEVVQDVAGPACFAGDLLAEGRALPL 390

Query: 312 VKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343
           +  GD ++  D   Y       +N +  P + 
Sbjct: 391 LDQGDYVAALDTGAYYFAHHYAYNSLARPGVY 422


>gi|239981809|ref|ZP_04704333.1| lysine/ornithine decarboxylase [Streptomyces albus J1074]
 gi|291453668|ref|ZP_06593058.1| lysine/ornithine decarboxylase [Streptomyces albus J1074]
 gi|291356617|gb|EFE83519.1| lysine/ornithine decarboxylase [Streptomyces albus J1074]
          Length = 472

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 53/352 (15%), Positives = 93/352 (26%), Gaps = 34/352 (9%)

Query: 25  RKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG-HEKFGGETHAY-NVAYK 82
                V    A+K      +   L +   G   +S  E+ L        E     + A  
Sbjct: 73  APGTPVLHAFAVKATPLVPVLRLLAEAGLGAEVASPGELALATAAGIPPERIVLDSPAKT 132

Query: 83  DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ--KLHKKIGLRINPSVSYSKFILADPNRPF 140
             EI   L     +  +   +L +             +G+R+NP V            P 
Sbjct: 133 PAEIREALRLGVALNADNPQELERLDAILDGATPSSPVGVRVNPQVGGGSIGALSTATPT 192

Query: 141 SRLGEKCKD--------KIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFI-- 190
           S+ G   +D           +    +  L  H+  +       +  L  +          
Sbjct: 193 SKFGVALRDPGARDWVLGAYAARPWLTRLHAHSGSQGMPLELLAEGLGALYDLAEEINEA 252

Query: 191 ---TQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-------SVQIYLEPGEAIVTN 240
               QI+ + +GGG+                     K           +  E G +++  
Sbjct: 253 AGRKQIDTLDIGGGLPVNFHSDADDPSHAAYAALLRKTVPGLFDGRYGLVTEFGRSVLAK 312

Query: 241 TTTLNTTVLDIS---------ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAM 291
             T+   V              +    V   +          +    A   P TG     
Sbjct: 313 HGTVLARVEYTKSAGERPIAVTHAGVQVATRTVYNPESWPLRIAAFDAEGRPRTGDTVVQ 372

Query: 292 -VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
            V G +C AGD+         +  GD  +  D   Y       +N +  P +
Sbjct: 373 DVAGPACFAGDLLATGQTMPRLHPGDWAAALDTGAYYFAHHYAYNSLPRPAV 424


>gi|126728979|ref|ZP_01744794.1| Putative Ornithine decarboxylase [Sagittula stellata E-37]
 gi|126710909|gb|EBA09960.1| Putative Ornithine decarboxylase [Sagittula stellata E-37]
          Length = 373

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 52/356 (14%), Positives = 98/356 (27%), Gaps = 26/356 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEV 63
           P +  D ++L       +        ++  A+K      + + L++        +S  E+
Sbjct: 23  PVFFYDPERLTRMARRFIDGFPG---EVTYAVKANPDPVVIEALSRAGLQAFDVASPEEM 79

Query: 64  MLGHEKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            L  +        Y+   +       A      +   + +S+L K  D            
Sbjct: 80  ALVRDVDPKARLHYHNPVRSKAEVAAARAFGVVSWSVDRMSELEKLGDIEGAEIAVRLKL 139

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--NVNGLMFHNNCENKSFLCFSAML 179
                      + D    F    EK    + +      V  + FH   + +    + A +
Sbjct: 140 PVAG------AVYDFGTKFGAAPEKAVALLRAVKDRGGVPSITFHPGTQCRDAQAWVAYI 193

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEP 233
               +        +  +++GGG      D               ++      +  +  EP
Sbjct: 194 AASARIAAEAGVTLHRLNVGGGFPAHRNDPEPDLEVIFDAIRDAVRASFGDDAPALVCEP 253

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ---ESATIYPNTGPYTA 290
           G A+V     L   V  I +    L        +   D    Q     A         T 
Sbjct: 254 GRAMVAEAFELALQVKAICDGAVFLNDGIYGGLSEWRDLSPSQRLTAYAQDGTRRDGETV 313

Query: 291 --MVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343
              V G +C + D   +       +  GD + F     Y+      FNG     I 
Sbjct: 314 ANTVFGPTCDSLDRLSDQVSLPEDLAEGDYLLFHACGAYSTALVTRFNGYGARKIV 369


>gi|281353345|gb|EFB28929.1| hypothetical protein PANDA_013260 [Ailuropoda melanoleuca]
          Length = 381

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 47/376 (12%), Positives = 94/376 (25%), Gaps = 40/376 (10%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY--- 61
           P+ + +   L +             V    A+K  ++  +   L         +S     
Sbjct: 5   PFMVANLGVLASRHQAFCRAL--PWVSPFYAVKRNSSIWVLRVLAILGTSFDCASQMSPE 62

Query: 62  ----------EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK 110
                     E+              Y    K        +     +    S+    K  
Sbjct: 63  AAPECPPCQVELEQVLGLGVAPSRIIYANPCKPVSHIQYAACRGVQLMTFDSEEELTKVA 122

Query: 111 AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170
                 ++ L +    S S F L+        + E       +    V G  FH     +
Sbjct: 123 QHHPKARLVLWLWTQDSESTFPLSAKFGATLEVCEHLLQSARALGLAVVGASFHMGSNCQ 182

Query: 171 SFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
           +   F+    +  + F         +  + +GGG    +   P  +   R+         
Sbjct: 183 TARSFTQAFADCRRVFEMGRASRHDMSLLDIGGGFPGEEGFEPKFEEMARVINAVLAQDF 242

Query: 228 Q------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH---------VPDY 272
                  I  EPG     +  T    ++     ++       +             +   
Sbjct: 243 PVGGGVEIIAEPGHFYAASVCTAAVNIIAKKAVLQPGGRPPQAGVHLNEGHYGIFRIFSR 302

Query: 273 LLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFE-KPVKIGDRISFEDVAGYN 327
                   +    GP    +   + G +C A D           + +GD +    +  Y 
Sbjct: 303 EPVPRMPIVVKVRGPQPPLFPCTLYGPTCDAFDKLFPGELPMPELDVGDWLVLPSMGAYT 362

Query: 328 INRKNWFNGINMPTIA 343
               + FNG  +P   
Sbjct: 363 TTVSSTFNGF-LPASV 377


>gi|254456075|ref|ZP_05069504.1| lysine/ornithine decarboxylase [Candidatus Pelagibacter sp.
           HTCC7211]
 gi|207083077|gb|EDZ60503.1| lysine/ornithine decarboxylase [Candidatus Pelagibacter sp.
           HTCC7211]
          Length = 394

 Score =  122 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 53/352 (15%), Positives = 108/352 (30%), Gaps = 23/352 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSSLYEV 63
           P Y I K  + +              K+L A+K      +   + +   D    +S+ E+
Sbjct: 19  PVYCIRKNSIQSATKFFKNKFPG---KILYAVKTNPHPVVIKQIIESGVDQFDVASIEEI 75

Query: 64  MLGHEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
               +       +Y         I       +   F+  ++    K      + K     
Sbjct: 76  KAIRKYSQTAKCSYMHTVKSRESIKEAYFKYEIKTFSLDTKDELIKIIESTNNAKDLELF 135

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCK---DKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
                 ++    D ++ F  L  +       ++   K + GL FH   +    + ++  +
Sbjct: 136 VRVAVSNEHAEIDLSKKFGALSSEAAGLLRLVKQYSKKI-GLSFHVGSQCMHPISYAKGI 194

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-------KYSVQIYLE 232
            +I           ++I++GGG      D   +       E  +       +   +I  E
Sbjct: 195 SDIGNIIKKTKIIPDYINVGGGFPTIYPDLIPQTMENYFNEIKKSLDNLKLENLPEIICE 254

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVI------VDSSVEAHVPDYLLYQESATIYPNTG 286
           PG A+V  + +    V    +    +         D+     V    + +E+     +  
Sbjct: 255 PGRALVAESGSTIIKVNLRKKQKLYINDGTYGTLFDAGTPNIVFPSKMIKENTNKIISKK 314

Query: 287 PYTAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                  G +C + D   G F     +K  D I    +  Y +  +  FNG 
Sbjct: 315 LTAFDFFGPTCDSMDYMKGPFLLPNNIKENDYIELGQLGAYGLTFRTQFNGY 366


>gi|254875409|ref|ZP_05248119.1| lysA1, diaminopimelate decarboxylase [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254841408|gb|EET19844.1| lysA1, diaminopimelate decarboxylase [Francisella tularensis subsp.
           tularensis MA00-2987]
          Length = 294

 Score =  122 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 50/272 (18%), Positives = 89/272 (32%), Gaps = 25/272 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           TP Y+ D + L +    A           ++  A+K      +     +Y  G    S  
Sbjct: 23  TPCYIYDLELLEDTFLNAKKSLYKNFKNAEIHYAIKANHNPKIVGIAKKYGMGIDCVSGG 82

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK--FKDKAQKLHKK- 117
           E+    E K   +   +    K      +  + D   FN+ S          AQ+ +K+ 
Sbjct: 83  EIKRALEQKVDSQHIVFAGVGKADWEIELAIDNDIFAFNSESLEEIQVINQIAQRKNKQV 142

Query: 118 -IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE--------IKNVNGLMFHNNCE 168
            I LR+NP++           +   + G    D +             N+ GL +H   +
Sbjct: 143 NICLRVNPNIDAQTHHYISIGQFDDKFGIAFVDILNWLKDEYRNFANINIIGLHYHVGSQ 202

Query: 169 NKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLK 219
             ++  F           K        I+ I+ GGG+                 +  R +
Sbjct: 203 ILNYQVFQSLAITTNEHIKLLRQNDINIKHINFGGGLGIDYQNPQQNPIVDFDGYFARFR 262

Query: 220 EFSEKYSV-QIYLEPGEAIVTNTTTLNTTVLD 250
           EF E      ++ E G ++V  +  L + VL 
Sbjct: 263 EFFEYCDELTLHFELGRSLVGQSGVLVSQVLF 294


>gi|317476227|ref|ZP_07935478.1| pyridoxal-dependent decarboxylase [Bacteroides eggerthii 1_2_48FAA]
 gi|316907638|gb|EFV29341.1| pyridoxal-dependent decarboxylase [Bacteroides eggerthii 1_2_48FAA]
          Length = 146

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 52/146 (35%), Positives = 77/146 (52%), Gaps = 5/146 (3%)

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNT 285
           ++I LEPG A    T  L + V+DI EN      + + S   H+PD L       +    
Sbjct: 1   MRIILEPGSAFTWQTGVLTSEVVDIVENRGIRTAILNVSFTCHMPDCLEMPYQPVVRGAE 60

Query: 286 ----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
               GPY   + G SCL+GD  G + F+  ++IG+RI FED+  Y + + N FNGI+ P 
Sbjct: 61  MGNDGPYVYRLGGNSCLSGDYMGMWSFDHELQIGERIIFEDMIHYTMVKTNMFNGIHHPA 120

Query: 342 IAVKNVDGTIKAIREFSYNDYYNNLS 367
           IA+   +G     ++FSY DY + +S
Sbjct: 121 IAMWTKEGKADLFKQFSYEDYRDRMS 146


>gi|311895101|dbj|BAJ27509.1| putative diaminopimelate decarboxylase [Kitasatospora setae
           KM-6054]
          Length = 460

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 56/403 (13%), Positives = 96/403 (23%), Gaps = 62/403 (15%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP YL D    +      L      G  +  +LK      +  TL         SS  E
Sbjct: 31  GTPLYLYDLDV-VAAAHADLVAALPEGAVIHYSLKANPHTEVAGTLAALGCRAEVSSTGE 89

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHK--- 116
           +       F      Y+   K     A    +        +V  L   ++ A        
Sbjct: 90  LDAALAAGFHPADVTYSGPAKTAAEIATALRAGVTRFSVESVRDLEVLEELADLADPAES 149

Query: 117 ---------------KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-------KIESE 154
                             L    +      +        ++ G              +  
Sbjct: 150 AESAGPGDPAGPGGVIECLLRINADRPVPGMGLAMAGVSTKFGVDFARVLATPEAFRDRG 209

Query: 155 IKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTD---- 206
              + GL  +      +        +      G            + LGGG         
Sbjct: 210 RVRITGLHLYMGTNLPTEDVLLGQFEAGLAMCGELAAALGRDFAELDLGGGFGTPYAGPG 269

Query: 207 KDYPVKDFCQRLKEFSEKYSVQIY-------LEPGEAIVTNTTTLNTTVLDISENIKNLV 259
           +          L++  + +             E G  +V +  TL TTV+D+ E+     
Sbjct: 270 ERPAYPGLRAGLEKLLDLHVPTWRTGGPAVSFESGRYLVGSCGTLVTTVVDVKESKGQRY 329

Query: 260 IVDSSVEAHV-----------------PDYLLYQESATIYPNTGPYTAMVCGRSCLAGDI 302
            +  S   H+                         +             V G  C   D 
Sbjct: 330 ALVDSGIHHLGGLAGLRRLPPLRPGLLRLSGGGDPAVGREAGPDAGPVTVAGPLCTPLDQ 389

Query: 303 FGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPTIAV 344
           +G      P++ GD ++  +   Y +      F G   P   V
Sbjct: 390 WGSSSDLPPLRAGDLLAVPNTGAYGLTASLVGFLGYPAPVEVV 432


>gi|329847273|ref|ZP_08262301.1| lysine/ornithine decarboxylase [Asticcacaulis biprosthecum C19]
 gi|328842336|gb|EGF91905.1| lysine/ornithine decarboxylase [Asticcacaulis biprosthecum C19]
          Length = 423

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 50/349 (14%), Positives = 101/349 (28%), Gaps = 25/349 (7%)

Query: 20  TALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAYN 78
            A + ++N    +  A+K   +  + +TL          +SL EV L          A+ 
Sbjct: 31  AAHWFQQNFKGDVFYAVKANPSPWVLETLWAAGVRSFDVASLNEVELVRSTLPTARLAFM 90

Query: 79  VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGLRINPSVSYSKFILADP 136
              K     A       +   ++    + +    A    + + L +  + S     L   
Sbjct: 91  HPVKSRVSIAQAYFDFGVRTFSLDTHEELRKILDATGGARDLNLIVRLATSGEGSNLPLT 150

Query: 137 NRPFSRLGEKCKDKIESEI------KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFI 190
               ++ G +  D     +      +++ G+ FH   +      ++A +    +      
Sbjct: 151 ----NKFGVQAHDAPSLLMAARQATQDLMGVSFHVGSQCMRPTAYAAAMAAASRALVRAG 206

Query: 191 TQIEWISLGGGIHFTDK-------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243
              + + +GGG                +    +   E       Q++ EPG A+V  +T+
Sbjct: 207 VFADVVDVGGGFPSVYPGMVPPALSEYMDVINRAFDEMKVHEETQLWAEPGRALVAESTS 266

Query: 244 LNTTV----LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLA 299
           + T V     D                     + +                   G +C +
Sbjct: 267 VLTKVELRKGDALYLNDGSYGNLFDATHAKWPFPVRLHRQDEAETDTLKPFRFYGPTCDS 326

Query: 300 GDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
            D   G F     V  GD +    +  Y +     FNG         + 
Sbjct: 327 IDSMPGPFWLPDDVNEGDYVEIGMLGAYGVTMGTRFNGYGETDTVFLDD 375


>gi|71278023|ref|YP_271140.1| putative pyridoxal-dependent decarboxylase [Colwellia
           psychrerythraea 34H]
 gi|71143763|gb|AAZ24236.1| putative pyridoxal-dependent decarboxylase [Colwellia
           psychrerythraea 34H]
          Length = 415

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 54/383 (14%), Positives = 105/383 (27%), Gaps = 37/383 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           Y++     L  +L           +KL  A+K      +  TL+        +S  E+  
Sbjct: 27  YFVYQLDALKAHLAALQQ---QDVIKLWFAVKANPLSKIIQTLDSEGFNFDVASSGELAQ 83

Query: 66  GHE-KFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKA-------QKLH 115
                            K  +     +    +T +  +++QLN   +         + + 
Sbjct: 84  VLAQGIDPSRILNTGPAKSKKQLTAFIKQGVNTFVVESLNQLNWLNEAVLEQEQSLKSVE 143

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-----KIESEIKNVNGLMFH----NN 166
           K   L       +            +  G    +            ++ GL         
Sbjct: 144 KPKVLLRVQLQWHEGEKNPLGGNSLTPFGLSVSEWQNIHVDSYPALDLCGLHIFQWGNML 203

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEF 221
              K F  +S M+  +          +E + LGGG+              +         
Sbjct: 204 SNEKMFSLWSQMITPLTDLASSIGMTLEVLDLGGGLGIDYLGEGQALSWSQVIEDLAIIK 263

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESAT 280
           ++    +++LE G   V         V+D   N     +V  + +   +   +  Q    
Sbjct: 264 AKAGVKELWLELGRFAVAEYGYYVVPVVDRKMNYNQDQLVLAAGINHLLRPAITDQPFPV 323

Query: 281 IYPNTG-------PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                G            + G  C + D  G     K   +G+++ F     Y       
Sbjct: 324 QILREGFVAEDDSMQAFDLHGPLCTSMDKLGHLQLPKDTAVGEQLVFGYCGAYGFTESMP 383

Query: 334 -FNGINMPTIAVKNVDGTIKAIR 355
            F    +    V   +GT+  IR
Sbjct: 384 FFLCHELAAEYVY-QNGTLTQIR 405


>gi|78214012|ref|YP_382791.1| diaminopimelate decarboxylase [Synechococcus sp. CC9605]
 gi|78198471|gb|ABB36236.1| possible diaminopimelate decarboxylase [Synechococcus sp. CC9605]
          Length = 402

 Score =  122 bits (306), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 58/379 (15%), Positives = 111/379 (29%), Gaps = 41/379 (10%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           P+YLID   + N++             V+L  + K  +   +   ++    G    S  E
Sbjct: 20  PFYLIDFDGIENSIMRLKSAFDADFKKVRLAYSFKTNSLQAITTFMHSKSMGAEVVSGQE 79

Query: 63  VMLGHEK-FGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           +       F      +        E          I  ++V +L    +      K    
Sbjct: 80  LEWALSDNFEPNNIYFDGPVKSKKEHKRAAELNVNIQVDSVQELIDLLEITSDPSKLKVG 139

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENKSFLC 174
                       +   N+  SR G    +  E+           +GL  H+     +   
Sbjct: 140 ARLS--------MPYKNKINSRFGLTRSEFKEATTIMKRTGISFSGLHLHSGSNITNINQ 191

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIH------------FTDKDYPVKDFCQRLKEFS 222
           +   + +          ++ WI  GGG               T + +         K+  
Sbjct: 192 YRESIMSCIDCITETWHELSWIDFGGGFPANTALANESEELPTPEAFSSCIKSIISKKNL 251

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
              +  + +EPG  +V +   L   V  I +     ++V ++    V     +       
Sbjct: 252 SLNNKTVVIEPGRCLVEDNGLLLARVEQIKKREDRNIVVTNAGLNLVKSMHSWYHPVIFL 311

Query: 283 PNTGPY----TAMVCGRSCLAGDIFGEFHF--EKPVKIGDRISFEDVAGYNINRKNWFN- 335
                        V G +C   D+  +        ++IGD I+     GY++     FN 
Sbjct: 312 RQEIDEEQSTPYEVYGCNCFESDLIIDELEGPPSDLRIGDWIAIGSTGGYDM---QNFNA 368

Query: 336 -GINMPTIAVKNVDGTIKA 353
                P+I   + +G  K 
Sbjct: 369 WTQPYPSIYGSSREGIKKL 387


>gi|241948045|ref|XP_002416745.1| ornithine decarboxylase, putative [Candida dubliniensis CD36]
 gi|223640083|emb|CAX44329.1| ornithine decarboxylase, putative [Candida dubliniensis CD36]
          Length = 494

 Score =  122 bits (306), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 61/405 (15%), Positives = 121/405 (29%), Gaps = 81/405 (20%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  +++N+++     ++   ++   A+KC + + +   LN+       +S  E+ L
Sbjct: 83  FFVCDLGEIINSVNQWK--QQLPMIQPYYAVKCNSNFKVLTLLNELGINFDCASKNEIDL 140

Query: 66  GHE---KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                 +   +   Y    K        +N +  +    +    +K      H KI +R+
Sbjct: 141 ILSLNIQQAHQKIIYANPCKTNSFIRHAANENVNLTTVDNIYELYKLAKFHPHCKILIRL 200

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIE---SEIKNVNGLMFHNNCENKSFLCFSAML 179
               S         ++    L    K+ +         + G+ FH     K F      +
Sbjct: 201 ITDDS--TAQCQLSSKFGCELNIAIKEILPKAKELGLQIYGVAFHVGSGAKDFNSIYQAI 258

Query: 180 KNIEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE---- 232
           KN    F        Q + + +GGG     +        Q +K    KY  Q +++    
Sbjct: 259 KNSRILFNEMLSLGFQPKLLDIGGGF----ERETFLQSSQMVKFALSKYFPQEFIQSNEI 314

Query: 233 -----PGEAIVTNTTTLNTTVLD------------------------------ISENIKN 257
                PG  +V N  TL T V+                               +  N   
Sbjct: 315 KFIAEPGRFMVANAFTLITHVIARRDLSTQTTAAAGAATVMGSNGNDIVPSAMLYINDGV 374

Query: 258 LVIVDSSVEAHVPDYLLYQESATIYPNTGP------------------------YTAMVC 293
              ++  +  H    +    +                                 +   + 
Sbjct: 375 YGNLNCILFDHQNPKVYVLTNQNQLFYKQEMMMKSLLIDTSANNNNNNNNKVDGFNFSIW 434

Query: 294 GRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGI 337
           G +C   D           V++GD + FE+V  Y       FNG+
Sbjct: 435 GPTCDGLDCVSSLVKLSKNVQVGDWLFFENVGAYTSCASTKFNGL 479


>gi|255524069|ref|ZP_05391030.1| Diaminopimelate decarboxylase [Clostridium carboxidivorans P7]
 gi|255512206|gb|EET88485.1| Diaminopimelate decarboxylase [Clostridium carboxidivorans P7]
          Length = 146

 Score =  122 bits (306), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 48/142 (33%), Gaps = 6/142 (4%)

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVI------VDSSVEAHVPDYLLYQESATIYP 283
            +EPG +I+ N  T    V    +             +  +    + D       A    
Sbjct: 1   MIEPGRSIIANAGTTLYNVGGTKKTYGGKQYIFIDGGMADNPRTALYDAKYEAVVANKVN 60

Query: 284 NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343
           +       + G+ C +GDI  +      V+ GD ++      YN +  + +N I  P + 
Sbjct: 61  SENSEIYTIAGKCCESGDIIIKEIELPEVERGDIMAVLTTGAYNYSMSSNYNRIPKPAVV 120

Query: 344 VKNVDGTIKAIREFSYNDYYNN 365
                    A++  +Y D   N
Sbjct: 121 FVKEGEAKIAVKRETYEDIIRN 142


>gi|84370045|ref|NP_001033599.1| arginine decarboxylase [Bos taurus]
 gi|83638748|gb|AAI09525.1| Arginine decarboxylase [Bos taurus]
          Length = 502

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 52/353 (14%), Positives = 113/353 (32%), Gaps = 33/353 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++       +++    V+   A+KC ++ G+   L +   G + ++  E+ L
Sbjct: 41  FFVADLGAVVR--KHFCFLKCLPRVRSFYAVKCNSSPGVLKVLAELGLGFSCANKAEMEL 98

Query: 66  G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             H         Y    K        +     + +  +++   K        K+ L +  
Sbjct: 99  VQHIGVPASKIIYANPCKQIAHIKYAAKHGVRLLSFDNEMELAKVVKSHPSAKMVLCVAT 158

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S+S   L+       +      +  + +   V G+ FH   +      ++  + +   
Sbjct: 159 EDSHSLSRLSLKFGASLKSCRHLLENAKRDHVEVVGVSFHIGSDCPDPQAYAQSIADARV 218

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPGE 235
            F        ++  + LGGG    +      +    +        F E   V I  + G 
Sbjct: 219 VFEMGAELGHRMHILDLGGGFPGVEDAKVRFEEIASVINSALDLYFPEGCGVDILAKLGR 278

Query: 236 AIVTNTTTLNTTVL-------DISENIKNLVIVDSSVEAHVPD--------YLLYQESAT 280
             VT+  TL  +++       D     +       SV  H+ +         L       
Sbjct: 279 YYVTSAFTLAVSIIAKKEVLLDQPGREEETSSSPKSVVYHLGEGVYGVFNSVLFDSACPA 338

Query: 281 IYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
                 P      Y++ + G      D   E  +   + +GD + FE++  Y 
Sbjct: 339 PILQKKPSTEQPLYSSSLWGPVASGCDCVAEGLWLPQLHVGDWLVFENMGAYT 391


>gi|51596221|ref|YP_070412.1| diaminopimelate decarboxylase [Yersinia pseudotuberculosis IP
           32953]
 gi|186895248|ref|YP_001872360.1| Orn/DAP/Arg decarboxylase 2 [Yersinia pseudotuberculosis PB1/+]
 gi|51589503|emb|CAH21127.1| possible diaminopimelate decarboxylase [Yersinia pseudotuberculosis
           IP 32953]
 gi|186698274|gb|ACC88903.1| Orn/DAP/Arg decarboxylase 2 [Yersinia pseudotuberculosis PB1/+]
          Length = 388

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 61/365 (16%), Positives = 121/365 (33%), Gaps = 21/365 (5%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLAL--KCFAAWGMFDTLNQYMDGTTSSSLYEV 63
            Y++D   +   +     I       ++ A   K      +   + +        SL+E+
Sbjct: 18  VYILDLDAMTQFVREFRGIWDKQFPHVIFAYSFKSNNIASVTQLMFREGFSAEVVSLHEL 77

Query: 64  MLGH-EKFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            L   + F G    +      D EI+  LSN   I  + ++++ +    A   + +  + 
Sbjct: 78  KLAINDGFFGTNIFFDGPVKLDNEIEFALSNNVNIQCDNITEIERVLALAANTNAEPHIS 137

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +  S  Y    L+          E     + +     NG+  H+     S       L++
Sbjct: 138 LRLSSDYRGQGLSRFGMDKDEWNEAIA-LLTTHGILCNGIHVHSGSNLSSCQGIVDTLES 196

Query: 182 IEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFSEKYSVQIYLE 232
            + E G     + +I +GGG   +          + Y VK   Q  +   + +   + LE
Sbjct: 197 FQDEIGALKNHLRFIDIGGGYPASTCGSDTASILEQYSVKIALQLRRLGIDFHKTPLILE 256

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA-- 290
           PG A+  +   L T ++         VI  +    ++     +     +     P     
Sbjct: 257 PGRALTEDFGYLVTRIVFAKCRYSTNVITTAVPGTNIRSAQYHNHRKVLIIPERPVNCEH 316

Query: 291 ---MVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
               V G +C   DI  +       + + D+I+      Y+I   + +     P I V +
Sbjct: 317 SVADVYGSNCYENDIIAKNVPVPFDLSLDDKIAIFSCGAYDIMNSSDWI-RKRPPIIVIS 375

Query: 347 VDGTI 351
              T 
Sbjct: 376 NGKTY 380


>gi|38494225|gb|AAH61550.1| Antizyme inhibitor 1 [Rattus norvegicus]
 gi|149066491|gb|EDM16364.1| antizyme inhibitor 1, isoform CRA_a [Rattus norvegicus]
 gi|149066492|gb|EDM16365.1| antizyme inhibitor 1, isoform CRA_a [Rattus norvegicus]
          Length = 448

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 55/371 (14%), Positives = 112/371 (30%), Gaps = 31/371 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  K++        +     +K    +KC +   + + L     G   SS  E+ L
Sbjct: 40  FFVGDLGKIVKKHSQWQNVVAQ--IKPFYMVKCNSTPAVLEILAALGTGFACSSKNEMAL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             E     E   Y    K        +     I    +++   K      + K+ L I  
Sbjct: 98  VQELGVSPENIIYTSPCKQASQIKYAAKVGVNIMTCDNEVELKKIARNHPNAKVLLHIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             +              +      +  +     + G+ FH +   K +  +   L +   
Sbjct: 158 EDNIGGEDGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHISSACKEYQVYVHALSDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
            F   G F   +  + +GGG   T+   ++            F E   +QI  EPG   V
Sbjct: 218 VFDMAGEFGFTMNMLDIGGGFTGTEIQLEEVNHVISPLLDIYFPEGSGIQIISEPGSYYV 277

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE--------------------- 277
           ++  TL   ++       + +              +Y                       
Sbjct: 278 SSAFTLAVNIIAKKVVENDKLSSGVEKNGSDEPAFVYYMNDGVYGSFASKLSEDLNTVPE 337

Query: 278 -SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                  +   +T+ + G SC   D   E      + +GD + F+++   +++  + F+ 
Sbjct: 338 VHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELSVGDWLIFDNMGADSLHGPSAFSD 397

Query: 337 INMPTIAVKNV 347
              P I     
Sbjct: 398 TQRPAIYFMMS 408


>gi|302534846|ref|ZP_07287188.1| diaminopimelate decarboxylase [Streptomyces sp. C]
 gi|302443741|gb|EFL15557.1| diaminopimelate decarboxylase [Streptomyces sp. C]
          Length = 448

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 47/353 (13%), Positives = 95/353 (26%), Gaps = 34/353 (9%)

Query: 24  IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAY-NVAY 81
           +     V    A+K      +   L+    G  ++S  E+ L        E     + A 
Sbjct: 56  VAPGTPVLHTFAVKAAPLVPVLRLLDACGLGCEAASPGELALARAAGIPAERTVLDSPAK 115

Query: 82  KDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGLRINPSVSYSKFILADPNRP 139
              E+   L+    +  +   +L +      A      +GLRINP               
Sbjct: 116 TAAELRGALALGIAVNADNHQELERLDALVAAAPTRSPVGLRINPQTGAGSIDALSTATA 175

Query: 140 FSRLGEKCKD--------KIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFI- 190
            S+ G   +D        +  +E   +  L  H+  +       +  ++ +         
Sbjct: 176 TSKFGFALRDPGARERLVRAFAERPWLTRLHTHSGSQGVPLELIAEGVRELHGLAEEINA 235

Query: 191 ----TQIEWISLGGGIHFTDKDYPVKDFCQRLKEF-------SEKYSVQIYLEPGEAIVT 239
                +++ + +GGG+                              S  +  E G +++ 
Sbjct: 236 AVGERRVDTLDIGGGLPVDFASDEHAPSYAAYVAALRAAVPALFDGSYGLVTEFGRSLLA 295

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLYQESATIY---------PNTGPYT 289
               +   V          + +  +                             +  P  
Sbjct: 296 KHGLVLARVEYTKTTGGRRIALTHAGVQLATRTVYAPAAWPLRILAYDAQGTPRDGSPVP 355

Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
             V G +C AGD+         +  GD I+  D   Y       +N +  P +
Sbjct: 356 QDVAGPACFAGDLLATARELPELFPGDVIAVPDTGAYAFTAHYGYNSLPRPAV 408


>gi|327285434|ref|XP_003227438.1| PREDICTED: arginine decarboxylase-like [Anolis carolinensis]
          Length = 463

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 55/364 (15%), Positives = 114/364 (31%), Gaps = 39/364 (10%)

Query: 5   PYYLID-KQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           P+++ D ++ +  +L           +K   ALKC  + G+  TL     G + ++  E+
Sbjct: 38  PFFVADLEEVVKKHLRLLK---ALPRIKPFYALKCNRSKGVVQTLAGLGAGFSCANKTEM 94

Query: 64  MLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
            L        E        K   +    ++    +    +++   K        ++ L +
Sbjct: 95  ALVKSVGVPAERIICASPCKQLSLIKYAASQGVQLMTFDNEVELGKVARSHPSARMLLCL 154

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
               S S   L+       +      +  +     V G+ FH          F+  + + 
Sbjct: 155 ATDDSRSSTHLSIKFGATLKTCRHLLETAKEMKVEVVGISFHLGSSCPDPQIFTQSIADA 214

Query: 183 EKEF---GHFITQIEWISLGGGIHFTDK------DYPVKDFCQRLKEFSEKYSVQIYLEP 233
              F        ++  + +GGG    ++      +            F E   V+I  E 
Sbjct: 215 RLVFEMGAEVGYKMHLLDIGGGFPAFEESRGRFEETSAVVNSALDLYFPEGCGVEIMAEL 274

Query: 234 GEAIVTNTTTLNTTV-------LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286
           G   V +  TL   +       LD   +         S   H+ D +     + I+ N  
Sbjct: 275 GRYYVDSAFTLAVNIVAKKEVTLDQVSSEDEDPGGKKSFVYHLNDGVYGSFGSVIFNNAC 334

Query: 287 P--------------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY----NI 328
           P              +++   G +    D   E      + +GD + FE++  Y    + 
Sbjct: 335 PIPILHQKPSPDQRLHSSSFWGPTGDGLDRLAEGVDLPELHVGDWLVFENMGAYAVPPSA 394

Query: 329 NRKN 332
           +  +
Sbjct: 395 SLSS 398


>gi|332710210|ref|ZP_08430161.1| diaminopimelate decarboxylase [Lyngbya majuscula 3L]
 gi|332350989|gb|EGJ30578.1| diaminopimelate decarboxylase [Lyngbya majuscula 3L]
          Length = 407

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 51/362 (14%), Positives = 119/362 (32%), Gaps = 18/362 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALY-IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           I TP  + D   + + +      +R+    +L LA+K      +   + +   G   +++
Sbjct: 43  IPTPALVYDLDAITDTVTALRNDLRQIQNSELCLAVKANRCQSVLRHMAKLGLGADITTI 102

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+           ++    +   ++  + +        ++SQL +   ++    K++GL
Sbjct: 103 QELDAAMAAGLWPIYSTAPGFSVADLKRLATEGVIPDLCSLSQL-RVWCESVNRDKRVGL 161

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--KNVNGLMFHNNCENKSFLCFSAM 178
           R+               R      +     + S I    +  +  H +            
Sbjct: 162 RLRFPFHEDAKAKNAVTRWSRFGVDPTDSGLHSLIQTHELEVVHLHVHEGETFSEADLHQ 221

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI--------- 229
             ++         ++E ++LGG   +    +  K   QR+ +   K   +I         
Sbjct: 222 TLDLLVSCLEIFPKVEVLNLGG--GWAYLFHLQKPEAQRVWDLVNKTITRINNQRQQPVR 279

Query: 230 -YLEPGEAIVTNTTTLNTTVL--DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286
             +EPG  +      L   V   D   +   +V++D+S    +        +   +    
Sbjct: 280 LVIEPGMLLTMMAGYLVAEVKAADDHPSGNRIVVLDTSAWNLMFWAPRPAVAQIPFREGP 339

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
            +   + G +C   D F        +++GDR+       Y  +     +G+ +P   V  
Sbjct: 340 MFVHDLAGCTCYETDYFCLNEKMARIEVGDRVILNASGAYTSSVARSLHGLPIPKEFVIR 399

Query: 347 VD 348
            +
Sbjct: 400 DN 401


>gi|85706322|ref|ZP_01037416.1| Putative Ornithine decarboxylase [Roseovarius sp. 217]
 gi|85669095|gb|EAQ23962.1| Putative Ornithine decarboxylase [Roseovarius sp. 217]
          Length = 376

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 44/364 (12%), Positives = 94/364 (25%), Gaps = 24/364 (6%)

Query: 1   MIKTP----YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGT 55
           M +TP     Y     +L                 +  A+K      +  + +   +   
Sbjct: 15  MRQTPDAALLY-FSPDQLQATARAFQSGFPG---LVTYAVKANPGAEVLANLVAAGITAF 70

Query: 56  TSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
             +S  E+    +        YN   +      V S      + ++  L +      ++ 
Sbjct: 71  DVASPEEMRAVRDVCPDAVLHYNNPVRSIPEIEVASQMGVRSY-SIDCLRELDKLTGRIA 129

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLM-FHNNCENKSFLC 174
               + +  ++           +                 +     M FH   +      
Sbjct: 130 PDAEITVRLALPVRGAAYDFGAKFGVGPERAADLLRVVAERGFTPSMTFHPGTQCADPAA 189

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQ 228
           + A +  + +       ++  +++GGG                      +       +  
Sbjct: 190 WGAYISVVAEVAHAAGVRLARLNVGGGFASHRTGTTPDLTAVFDHIGAEVARVFGPNAPA 249

Query: 229 IYLEPGEAIVTNTTTLNTTV------LDISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
           +  EPG A+V    ++   V        I  N      +    +   PD L         
Sbjct: 250 LVCEPGRAMVAEAFSMAVRVKALRDSGAIFVNDGVYGGLTEIRDIGAPDRLTVLAPDGTP 309

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
               P   +V G +C + D   +       +  GD +    +  Y       FNG  +  
Sbjct: 310 RTGAPLPRVVFGPTCDSIDRLPDPLPLPSDLAEGDYLLIAGMGAYTRCLSTDFNGYGLRE 369

Query: 342 IAVK 345
           I   
Sbjct: 370 IVTV 373


>gi|281340152|gb|EFB15736.1| hypothetical protein PANDA_011627 [Ailuropoda melanoleuca]
          Length = 460

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 58/383 (15%), Positives = 109/383 (28%), Gaps = 43/383 (11%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  K++        I     +K    +KC +   + + L     G   SS  E+ L
Sbjct: 40  FFVGDLGKIVKKHSQWQNIVAQ--IKPFYTVKCNSTPAVLEILAALGTGFACSSKTEMAL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             E     E   Y    K        +     I    +++   K      + K+ L I  
Sbjct: 98  VQELGVSPENIIYISPCKQVSQIKYAAKIGVNIMTCDNEVELKKISRNHPNAKVLLHIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             +              +      +  +     + G+ FH +   K    +   L +   
Sbjct: 158 EDNIGGEEGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARC 217

Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238
            F   G F   +  + +GGG      +   V      L    F E   V+I  EPG   V
Sbjct: 218 VFDMAGEFGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDVYFPEGSGVKIISEPGSYYV 277

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ---------------------- 276
           ++  TL   ++       +                +Y                       
Sbjct: 278 SSAFTLAVNIIAKKVVENDKFSSGVEKTGSDEPAFMYYMNDGVYGSFASKLSEDLNTIPE 337

Query: 277 ------------ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
                              +   +T+ + G SC   D   E      + +GD + F+++ 
Sbjct: 338 VHKASCITNNRTAYLKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMG 397

Query: 325 GYNINRKNWFNGINMPTIAVKNV 347
             +++  + FN    P I     
Sbjct: 398 ADSLHEPSAFNDFQRPAIYYMMS 420


>gi|94498726|ref|ZP_01305276.1| Orn/DAP/Arg decarboxylase 2 [Sphingomonas sp. SKA58]
 gi|94421825|gb|EAT06876.1| Orn/DAP/Arg decarboxylase 2 [Sphingomonas sp. SKA58]
          Length = 355

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/352 (12%), Positives = 97/352 (27%), Gaps = 34/352 (9%)

Query: 28  AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYN-VAYKDCE 85
           AG+ L  A+K      +   +   +DG   +S  E+ +  E     +  ++     +  E
Sbjct: 3   AGIDLHYAIKANPFAPLLSRMAVQVDGFDIASGGELGMALEAGMAPDRISFAGPGKRTDE 62

Query: 86  IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGE 145
           + A +    TI   +  +  +     + + K+  L I  +  +            ++   
Sbjct: 63  LTAAIFAGVTINLESEGEARRAIAAGEAIGKQPRLAIRVNPDFDLKGSGMRMGGGAKPFG 122

Query: 146 KCKDKIESEIKNV-------NGLMFHNNCENKS----FLCFSAMLKNIEKEFGHFITQIE 194
              D+  +  + +        G       +N          +A +    +          
Sbjct: 123 VDADRAAALARWIIDAGANWRGWHIFAGSQNLDAQAIIDTQAATIALAARLSQEVGATPP 182

Query: 195 WISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV---------QIYLEPGEAIVTNTTTLN 245
            ++LGGG              + +     +            +  LE G  +V       
Sbjct: 183 LVNLGGGFGLAYFPGDTPLDIRPVGVALGRALESRPPILAGSRFALELGRWLVGEAGVYL 242

Query: 246 TTVLDISENIKNLVIVDSSVEAH-----------VPDYLLYQESATIYPNTGPYTAMVCG 294
           T V+D+ ++     +V      H           +        ++            + G
Sbjct: 243 TRVVDVKDSQGERFVVVDGGLHHQLAASGNFGTVIRRNYPIALASRFDAAPALDPVTIVG 302

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGINMPTIAVK 345
             C   D  GE      +  GD I+      Y  +     F G       + 
Sbjct: 303 CLCTPIDRLGEKVALPQISEGDLIAIFLAGAYGASASPMAFLGHPPARELLL 354


>gi|302560274|ref|ZP_07312616.1| orn/DAP/Arg decarboxylase, family 2 [Streptomyces griseoflavus
           Tu4000]
 gi|302477892|gb|EFL40985.1| orn/DAP/Arg decarboxylase, family 2 [Streptomyces griseoflavus
           Tu4000]
          Length = 470

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 53/400 (13%), Positives = 111/400 (27%), Gaps = 44/400 (11%)

Query: 8   LIDKQKLLNNLDTALYIRK-----NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           L+D   +  +        +        V    A+K      +   L +   G   +S  E
Sbjct: 54  LLDVTGIRESAAELKAAFEAVAAPGTPVLHAFAVKASPLVPVLRLLREEGIGAEVASPGE 113

Query: 63  VMLGHE-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKI 118
           + L        E     + A    E+   L+    ++ ++  +L++             +
Sbjct: 114 LALARAAGVEPERTVLDSPAKTPAELREALALGIAVMVDSPQELDRLDALMAGSASRSPV 173

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFHNNCE-- 168
           G+R+NP V              S+ G   +D        +   +   +  L  H   +  
Sbjct: 174 GIRVNPQVGGGSIEALSTATATSKFGVALRDEGAREWVVRAYLDRPWLTRLHAHTGSQGI 233

Query: 169 --NKSFLCFSAMLKNIEKEFGHFIT-QIEWISLGGGIHFTDKDY----PVKDFCQRLK-- 219
             +      +   +  E+        Q++ I +GGG+               + + L   
Sbjct: 234 ALSMMARGITETYELAEEINRRAGRRQVDTIDIGGGLPVNFASEESTPTYTRYARLLSEA 293

Query: 220 -EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDIS---------ENIKNLVIVDSSVEAHV 269
                     +  E G +++    T+   V              +    V   +      
Sbjct: 294 VPGLFDGRYGLVTEFGRSLLAKHGTVVARVEYAKSAGGRPVAVTHAGVQVATRTVYAPAS 353

Query: 270 PDYLLYQESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
               +    A   P  GP     V G +C AGD+  +      ++ GD  +  D   Y  
Sbjct: 354 WPLRIAAYDAKGRPKEGPPVVQDVAGPACFAGDLLAQAQSLPLLEQGDHAAALDTGAYYF 413

Query: 329 NRKNWFNGINMPTIA-VKNVDGTIK----AIREFSYNDYY 363
                +N +  P +        +           +  +  
Sbjct: 414 AHHYAYNSLPRPGVYGFVPGGESGIAFATVRTPQTVEEIV 453


>gi|159114038|ref|XP_001707244.1| Ornithine decarboxylase [Giardia lamblia ATCC 50803]
 gi|157435348|gb|EDO79570.1| Ornithine decarboxylase [Giardia lamblia ATCC 50803]
          Length = 448

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 52/406 (12%), Positives = 100/406 (24%), Gaps = 71/406 (17%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67
           +++  ++  + +          V++  A+KC     +  +L+    G   +S  EV    
Sbjct: 41  VLNVSEIERHYNIWKTHLPE--VQVRYAVKCNMHPLLLRSLHLLGAGFDCASPAEVRAAL 98

Query: 68  -EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSV 126
                     Y    K           +   F   S+             K+G  +   +
Sbjct: 99  SAGCPPSKIIYANPQKPKRSIEEAFRLNCNTFTFDSEHELLSMLESTPPGKVGRFVLRLL 158

Query: 127 SYSKFILADPNR-PFSRLGEKCKDKIESEIK---NVNGLMFHNNCENKSFLCFS---AML 179
              +          F     +C   I        N+ G  FH      S   F      +
Sbjct: 159 PPDESSSICRFGVKFGASPSECYRLIRLCKHLGANLVGFSFHVGSGCGSVDSFRLAVQYM 218

Query: 180 KNIEKEFGHFITQIEWISLGGGI-----HFTDKDYPVKDF----------------CQRL 218
               K        +  +++GGG           +                        R+
Sbjct: 219 GEAAKFAKEQGFTLTVLNIGGGYMSKGAERHYDEPNRHAHITPPSFEEIASALREEINRI 278

Query: 219 KEFSEKYSVQ--IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDS------------- 263
           K +    S    I  EPG     +  TL T +         +                  
Sbjct: 279 KVYFTNKSEDLEIMAEPGRFFAGDIMTLGTRIYGRRIIFDKIEDNSCLTEKEIMESGKAS 338

Query: 264 --------------SVEAHVPDYLLYQESATIYPNTGPY-----------TAMVCGRSCL 298
                            A + D+++     T                   T+ + G +C 
Sbjct: 339 INEVKYYVGDGVYGYYNAILFDHVVPHLRFTDKHGNRKELSGAHAGSSLNTSSIFGPTCD 398

Query: 299 AGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344
           + D   +      + +GD +  +    Y       FNGI   ++  
Sbjct: 399 SLDCILKERKLPLLDVGDWVITDAFGAYTYAAATEFNGIPHVSVVC 444


>gi|150399162|ref|YP_001322929.1| Orn/DAP/Arg decarboxylase 2 [Methanococcus vannielii SB]
 gi|150011865|gb|ABR54317.1| Orn/DAP/Arg decarboxylase 2 [Methanococcus vannielii SB]
          Length = 409

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 61/391 (15%), Positives = 121/391 (30%), Gaps = 37/391 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           +YL+D  K + N D  L   +       +  + K      +   +N+        S  E 
Sbjct: 19  FYLLDSNKFVKNYDEFLGEFQKIYPNTVIAYSYKTNYLPHLCSIVNKKGGFAEVVSKMEY 78

Query: 64  MLGHEK--FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            L  +                   ++  L     +  ++  +L+  ++ A     KI   
Sbjct: 79  DLAIKIGVIPSNIIVNGPLKTKEHLEYFLLKGSIVNVDSYRELDLIREIANSNPGKILSV 138

Query: 122 --INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNN-----CENKSFLC 174
                    S       +   +   EK K+  + +   + G+  H         +K    
Sbjct: 139 GIRCNFEMGSTVSRFGFDVRDAEFIEKFKELKKIDNLYIKGIHCHFPDRNLDSYSKRVDN 198

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC-------------QRLKEF 221
              +L  + KE       I     G    F  K +                   +  K  
Sbjct: 199 LINILDLLFKENIPEFVDIGGGYFGKVNDFLAKQFNCNVPSYSDYASIIASRFKEYFKNI 258

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV--------PDYL 273
            E    ++ LEPG A+V +T      +++I       + + +  + ++            
Sbjct: 259 PENRKPKLILEPGTALVADTMKFIAKIVEIKNIRGKKIAMTTGSKFNMGLFGLSINLPIN 318

Query: 274 LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
           +Y E              + G +C+  D   + +    + IGD I+F++V  Y+   K  
Sbjct: 319 VYSEFKNGKFINN---VDISGYTCIEADYLFKNY-CGILNIGDYIAFDNVGSYSFVFKPP 374

Query: 334 FNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           F   N+P I   N D       + ++ D + 
Sbjct: 375 FICPNVP-IIDYNGDKFKIVKHKETFEDIFK 404


>gi|284043639|ref|YP_003393979.1| diaminopimelate decarboxylase [Conexibacter woesei DSM 14684]
 gi|283947860|gb|ADB50604.1| Diaminopimelate decarboxylase [Conexibacter woesei DSM 14684]
          Length = 475

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 53/426 (12%), Positives = 110/426 (25%), Gaps = 65/426 (15%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYMDGTTSS 58
            +P +++ +  L             A  +    +L A+K      +   L Q   G    
Sbjct: 39  GSPLFVVSEPALRARARRVQAAFAAAWPEGPVVVLPAVKASTVVALHRVLAQEGCGADLY 98

Query: 59  SLYEVMLG-HEKFGGETH-AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
              E+ +        +       A     I+  ++    I  + V ++   +D A+ L +
Sbjct: 99  GGAELEIAVRAGTDPDRISVNGTAKDRPTIERAIALGARITIDDVHEVEIARDAARALGR 158

Query: 117 KIGLRINPSV-------------------------SYSKFILADPNRPFSRLGEKCKDKI 151
              LR+                                                +  D  
Sbjct: 159 PARLRVRLRPEILLDAPSDGNAMIAATDGSVLRIKDAYGRYKPGVPFDDMARIGRSLDAP 218

Query: 152 ESEIKNVNGLMFHNNCE-------------------NKSFLCFSAMLKNIEKEFGHFITQ 192
           E E+  V  + F  +                     ++ +  ++    ++   F      
Sbjct: 219 EIEMIGV-HMHFPRHTTDLGVIGHVADRYAALIAELSELWDGWTPRQIDVGGGFAPPGDP 277

Query: 193 IEWISLGGGIHFTDKDYPVKDFCQ------RLKEFSEKYSVQIYLEPGEAIVTNTTTLNT 246
               +                           +   +    Q+ +EPG ++         
Sbjct: 278 FGRRNPSFAHRTPPPIEAYASTIAEHLRTGLARHGIDTAGRQLEVEPGRSLFGPVGVHLA 337

Query: 247 TVLDISEN--IKNLVIVDSSVEAHVPD-----YLLYQESATIYPNTGPYTAMVCGRSCLA 299
           TVL++           V++    H        +  +  +       G  TA V GRSC+ 
Sbjct: 338 TVLNVKRQTRPFPHAWVETDTTQHFLPGVGQEWDDFPVAFDRVAGDGELTADVVGRSCM- 396

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
           GD+            GD ++F     Y     + FN +  P   + +        R  + 
Sbjct: 397 GDVLASDAPVPAPVRGDVLAFASTGAYQETSASNFNALPRPATVLVDSGQAHLVRRAETV 456

Query: 360 NDYYNN 365
           +D    
Sbjct: 457 DDVLGR 462


>gi|239624545|ref|ZP_04667576.1| diaminopimelate decarboxylase [Clostridiales bacterium 1_7_47_FAA]
 gi|239520931|gb|EEQ60797.1| diaminopimelate decarboxylase [Clostridiales bacterium 1_7_47FAA]
          Length = 430

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 60/402 (14%), Positives = 112/402 (27%), Gaps = 58/402 (14%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+ D       +     I     +K++ A+K    +    T  Q  DG    S  E
Sbjct: 13  GTPAYVFDLDAFALRIRHMKEILGQ-DIKIIYAMKANPFFT--RTAAQEADGLEVCSPGE 69

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEID--------------------AVLSNCDTIIFNTV 101
             +        E    +   K+                        A     DT    ++
Sbjct: 70  YAICQRAGVPPEKIVLSGVNKEAAHIREVVGGVGSCGAAVGNPGPAAGSPGPDTYTAESL 129

Query: 102 SQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-NVNG 160
           SQL   +  A +        +    S ++F                  +  +    +  G
Sbjct: 130 SQLALLESCAAQAQGSPLRVLLRLTSGNQF------GMDEETILSVIQRRNAYPHLHFTG 183

Query: 161 LMFHNNCENKSFLCFSAMLKNIEKEFGHFI----TQIEWISLGGGIHFTDK------DYP 210
           L +++  + K        L+ ++            +I  +  G G H          D  
Sbjct: 184 LQYYSGTQKKQSGKIHKELERLDALLARIRDELQHEIRELEYGPGFHIPYFEGESPVDED 243

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV- 269
                 R    +  +   I LE G  +     +  T V+D  +N      +      HV 
Sbjct: 244 AMLANFRAALDAMAFKGSISLEAGRFLAAPCGSYVTRVVDTKQNQGQDYCIVDGGINHVN 303

Query: 270 ---------------PDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKI 314
                              + Q     +         VCG  C +GD+  +      ++ 
Sbjct: 304 YYGQAMAMKIPAIRHLPQSISQGMPADHIPGENTQWTVCGSLCTSGDMLVKNLPLSGLRT 363

Query: 315 GDRISFEDVAGYNINRK-NWFNGINMPTIAVKNVDGTIKAIR 355
           GD + F+ +  Y +      F    +P +     +  +K +R
Sbjct: 364 GDMLVFDRIGAYAVTEGIYLFLSRGLPAVLTYERETGLKLVR 405


>gi|62259046|gb|AAX77838.1| unknown protein [synthetic construct]
          Length = 329

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 50/280 (17%), Positives = 92/280 (32%), Gaps = 25/280 (8%)

Query: 4   TPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           TP Y+ D + L +    A           ++  A+K      +     +Y  G    S  
Sbjct: 49  TPCYIYDLELLEDTFLNAKKSLYKNFKNAEIHYAIKANHNPKIVGIAKKYGMGIDCVSGG 108

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK--FKDKAQKLHKK- 117
           E+    E K   +   +    K      +  + D   FN+ S          AQ+ +K+ 
Sbjct: 109 EIKRALEQKVDSQHIVFAGVGKADWEIELAIDNDIFAFNSESLEEIQVINQIAQRKNKQV 168

Query: 118 -IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE--------IKNVNGLMFHNNCE 168
            I LR+NP++           +   + G    D +             N+ GL +H   +
Sbjct: 169 NICLRVNPNIDAQTHHYISIGQFDDKFGIAFVDILNWLKDEYRNFANINIIGLHYHVGSQ 228

Query: 169 NKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLK 219
             ++  F           K        I+ I+ GGG+                 +  R +
Sbjct: 229 ILNYQVFQSLAITTNEHIKLLRQNDINIKHINFGGGLGIDYQNPQQNPIVDFDGYFARFR 288

Query: 220 EFSEKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
           EF E      ++ E G ++V  +  L + VL    ++ + 
Sbjct: 289 EFFEYCDELTLHFELGRSLVGQSGVLVSQVLFYPYDVPDY 328


>gi|308161400|gb|EFO63849.1| Ornithine decarboxylase [Giardia lamblia P15]
          Length = 448

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 53/406 (13%), Positives = 104/406 (25%), Gaps = 71/406 (17%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67
           +++  ++  + +          V++  A+KC     +  +L+    G   +S  EV    
Sbjct: 41  VLNVSEIEKHYNIWKTHLPE--VQVRYAVKCNMHPLLLRSLHLLGAGFDCASPAEVRAAL 98

Query: 68  -EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSV 126
                     Y    K           +   F   S+             K+G  +   +
Sbjct: 99  SAGCPPSKIIYANPQKPKRSIEEAFRLNCNTFTFDSEHELLSMLESTPSGKVGRFVLRLL 158

Query: 127 SYSKFILADPNR-PFSRLGEKCKDKIESEIK---NVNGLMFHNNCENKSFLCFS---AML 179
              +          F     +C   I        N+ G  FH      S   F      +
Sbjct: 159 PPDESSSICRFGVKFGASPSECYRLIRLCKHLGANLVGFSFHVGSGCGSVDSFRLAVRYM 218

Query: 180 KNIEKEFGHFITQIEWISLGGGI--------------HFTDKDYPVKDFCQRLKEFSEKY 225
               K        +  +++GGG               H        ++    L+E  +K 
Sbjct: 219 GEAAKFAKEQGFTLTVLNIGGGYMSKGAERHYDEPNKHAHITPPSFEEIAAALREEIDKI 278

Query: 226 SV---------QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDS------------- 263
            +         +I  EPG     +  TL T +         +                  
Sbjct: 279 KIYFTNKSEDLEIMAEPGRFFAGDIMTLGTRIYGRRIIFDKIEDNSCLTEKEIMESGKAS 338

Query: 264 --------------SVEAHVPDYLLYQESATIYPNTGPY-----------TAMVCGRSCL 298
                            A + D+++     T                   T+ + G +C 
Sbjct: 339 INEVKYYVGDGVYGYYNAILFDHVVPHLRFTDKHGNCKELSEAHIGSSLNTSSIFGPTCD 398

Query: 299 AGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344
           + D   +      + +GD +  +    Y       FNGI   ++  
Sbjct: 399 SLDCILKERKLPLLDVGDWVITDAFGAYTYAAATEFNGIPHVSVVC 444


>gi|307180320|gb|EFN68353.1| Ornithine decarboxylase [Camponotus floridanus]
          Length = 414

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/371 (13%), Positives = 100/371 (26%), Gaps = 80/371 (21%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y++D   ++          K   V+   A+KC     +                 EV+ 
Sbjct: 36  FYVLDIGDIVQKHQIWKE--KLPRVEPYYAVKCNDNLMVI----------------EVLA 77

Query: 66  GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPS 125
                                         I+        + +  A+     +G++    
Sbjct: 78  AL-------------------GVGFDCASKIVI-------RIRCDAETAQCPLGMKFGCD 111

Query: 126 VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKE 185
             +                            NV G  FH     +    +   + + +  
Sbjct: 112 PIHE--------------APSLLRLAYMLGLNVVGFSFHVGSGCQDPPIYHCAIHHCKIL 157

Query: 186 FGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV----QIYLEPGEAIV 238
           F        +   + LGGG    DK   +    + + +  ++Y       +  EPG   V
Sbjct: 158 FDMATNLGFKPYLLDLGGGYP-GDKGTSIDKMAEIINKALDEYFNTDAVHVIAEPGRFYV 216

Query: 239 TNTTTLNTTVLD--------------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
            +  TL T +                          V  S    + D+            
Sbjct: 217 ASAFTLATNIHSKRSVRGDENSSTTVTHNMYYINDGVYGSFNCLLYDHQHVTPIPLKNGC 276

Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344
                + + G +C   D   +      +++GD I FE++  Y +   + FNG  +P + V
Sbjct: 277 GKMIPSSIWGPTCDGLDKVVDNIMLHDMELGDWIIFENMGAYTLPVASPFNGFPIPKVHV 336

Query: 345 KNVDGTIKAIR 355
              +     ++
Sbjct: 337 VADEDIWLLLK 347


>gi|320164368|gb|EFW41267.1| diaminopimelate decarboxylase [Capsaspora owczarzaki ATCC 30864]
          Length = 459

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 57/377 (15%), Positives = 111/377 (29%), Gaps = 42/377 (11%)

Query: 9   IDKQKLLNNLDTALYIRKN---AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +D   +   +D+                LA+K      +   + Q   G  ++SL E++ 
Sbjct: 38  LDLDHVRGAIDSVRAAFDADSTTDFCHCLAIKSNPTLRVLQYVVQQGMGLEAASLGELVQ 97

Query: 66  G-HEKFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL-----HKKI 118
                   E   + +      EI   L    TI  + + +L++    A          ++
Sbjct: 98  AIRAGAPAENIVFDSPVKTTEEIRFALKQGVTINLDNMPELDRVAAIAAASGDAASRYRV 157

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE------IKNVNGLMFHNNCE---- 168
           GLRINP  +             S+ G    D  +           +N +  H   +    
Sbjct: 158 GLRINPQGASGSLEAFSTGTMTSKFGIGLVDARQEIIAAYKRYSWLNAIHIHVGSQGIPM 217

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQ-IEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-- 225
           +        ML  ++        Q I  I +GGG+        +      L E  ++   
Sbjct: 218 DLMASGVRRMLDLVKDIHAAVGKQQITLIDIGGGMSVNFSSEEITPTFAELSETLQQAAP 277

Query: 226 -----SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLYQESA 279
                  +++ E G +IV       + +  +       + +        +       +  
Sbjct: 278 ELFSGEYRVFTEFGRSIVAKAGFYASRLEYVKTTGGRQIALQHIGADMAIRTIYHPDKWP 337

Query: 280 -------------TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
                         +  +       + G  C AGDI         +  G+ I   DV GY
Sbjct: 338 LRVTLLTSEGALRPVESSEALVETDIAGPCCFAGDIIAHRRPFPQLHSGEYILVHDVGGY 397

Query: 327 NINRKNWFNGINMPTIA 343
             +  + +N    P + 
Sbjct: 398 YHSSYSKYNLRQAPAVY 414


>gi|315497323|ref|YP_004086127.1| orn/dap/arg decarboxylase 2 [Asticcacaulis excentricus CB 48]
 gi|315415335|gb|ADU11976.1| Orn/DAP/Arg decarboxylase 2 [Asticcacaulis excentricus CB 48]
          Length = 422

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 41/348 (11%), Positives = 95/348 (27%), Gaps = 22/348 (6%)

Query: 20  TALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSSLYEVMLGHEKFGGETHAYN 78
            A + +++    +  A+K   +  + +TL          +S+ EV L          A+ 
Sbjct: 31  AAQWFQRHFNGDVFYAVKANPSSWVIETLLDGGISSFDVASINEVKLVRGLAPEARLAFM 90

Query: 79  VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK------AQKLHKKIGLRINPSVSYSKFI 132
              K     A   +   +   ++    + +        A+ L+  + L  +   S     
Sbjct: 91  HPVKSRRAIAEAYSDFGVKTFSLDTHEELQKILDATGGAKDLNLIVRLATSGEGSNLPLT 150

Query: 133 LADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQ 192
                +P+               ++  G+ FH   +      ++A +    +        
Sbjct: 151 NKFGAQPYEAPALLL--AARQATQDRMGVSFHVGSQCMRPTAYAAAMSAASRALVRAGVL 208

Query: 193 IEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDIS 252
            + + +GGG              + +      +      E  E       +L      I 
Sbjct: 209 ADIVDVGGGFPSVYPGMVPPSLPEYMDVIHRAFDEMKVHEATELWAEPGRSLVAESTSIL 268

Query: 253 ENIKNLVIVDSSVEA----HVPDYLLYQESATIYPNTGP--------YTAMVCGRSCLAG 300
             ++        +      ++ D    +    +  +                 G +C + 
Sbjct: 269 ARVELRKGDALYLNDGAYGNLFDATHAKWPFPVRLHRAEDGDEQPELKPFRFYGPTCDSI 328

Query: 301 DIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
           D   G F     V+ GD +    +  Y +     FNG         + 
Sbjct: 329 DHMPGPFWLPADVEEGDYVEIGMLGAYGVAMTTEFNGYGQTETVFLDD 376


>gi|296490168|gb|DAA32281.1| arginine decarboxylase [Bos taurus]
          Length = 412

 Score =  121 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 52/353 (14%), Positives = 113/353 (32%), Gaps = 33/353 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++       +++    V+   A+KC ++ G+   L +   G + ++  E+ L
Sbjct: 41  FFVADLGAVVR--KHFCFLKCLPRVRSFYAVKCNSSPGVLKVLAELGLGFSCANKAEMEL 98

Query: 66  G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             H         Y    K        +     + +  +++   K        K+ L +  
Sbjct: 99  VQHIGVPASKIIYANPCKQIAHIKYAAKHGVRLLSFDNEMELAKVVKSHPSAKMVLCVAT 158

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S+S   L+       +      +  + +   V G+ FH   +      ++  + +   
Sbjct: 159 EDSHSLSRLSLKFGASLKSCRHLLENAKRDHVEVVGVSFHIGSDCPDPQAYAQSIADARV 218

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPGE 235
            F        ++  + LGGG    +      +    +        F E   V I  + G 
Sbjct: 219 VFEMGAELGHRMHILDLGGGFPGVEDAKVRFEEIASVINSALDLYFPEGCGVDILAKLGR 278

Query: 236 AIVTNTTTLNTTVL-------DISENIKNLVIVDSSVEAHVPD--------YLLYQESAT 280
             VT+  TL  +++       D     +       SV  H+ +         L       
Sbjct: 279 YYVTSAFTLAVSIIAKKEVLLDQPGREEETSSSPKSVVYHLGEGVYGVFNSVLFDSACPA 338

Query: 281 IYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
                 P      Y++ + G      D   E  +   + +GD + FE++  Y 
Sbjct: 339 PILQKKPSTEQPLYSSSLWGPVASGCDCVAEGLWLPQLHVGDWLVFENMGAYT 391


>gi|238925013|ref|YP_002938529.1| putative diaminopimelate decarboxylase [Eubacterium rectale ATCC
           33656]
 gi|238876688|gb|ACR76395.1| probable diaminopimelate decarboxylase [Eubacterium rectale ATCC
           33656]
          Length = 429

 Score =  121 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 47/418 (11%), Positives = 112/418 (26%), Gaps = 69/418 (16%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVK---LLLALKCFAAWGMFDTLNQYMDGTTS 57
           M +TPYY+ D  +               G +   L  ++K      +   L + +D    
Sbjct: 1   MRQTPYYVFDTDEFAKRAAMIRAALDCKGGRRIPLCFSIKANPF--LLHRLPEGLDHVEV 58

Query: 58  SSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL 114
            S  E+ +        E+  Y+   K+              +   ++       +   + 
Sbjct: 59  CSPGELEICIALGVKPESIIYSGVMKEKCDIERAVSYGAGILTCESIRHAALISEVMIEC 118

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-------VNGLMFHNNC 167
            ++         + +K  +       ++ G   +D               V G+ +++  
Sbjct: 119 IQEGAHE--AEFAETKAQVILRLTSGNQFGMSLEDIEYIISHPDEFKGITVIGIHYYSGT 176

Query: 168 E---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF--------CQ 216
           +    K       +   +      +  + + +  G G+     +   ++          +
Sbjct: 177 QKSLRKINKDLEKIKSALTGLKEKYGFEPQLVEYGPGLCVEYFEDDWQEKEKQSLDEAAE 236

Query: 217 RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-----PD 271
            L+EF+E+Y +   +E G  +  +     T V DI         +      H+       
Sbjct: 237 VLREFAEEYPLG--IEMGRFLAASCGKYYTQVKDIKSTGDANYAILDGGIHHLNYFGQRM 294

Query: 272 YLLYQESATIYPNTGP---------------------------------YTAMVCGRSCL 298
            +                                                   +CG  C 
Sbjct: 295 AMQVPPIKVFDGIEWELEKSSDVCRVLGMVGYECMNDIINKNMQKANDCEDYTLCGSLCT 354

Query: 299 AGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIAVKNVDGTIKAIR 355
             D+         ++I + I F     Y++      F    +P +   +     + +R
Sbjct: 355 VADVMVREVVLPRLEIDNIIEFGHCGAYSVTEAPVLFLSRKLPAVYAYSKQKGFELLR 412


>gi|187466288|emb|CAQ51904.1| arginine decarboxylase [Mus musculus]
          Length = 459

 Score =  121 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 52/352 (14%), Positives = 114/352 (32%), Gaps = 32/352 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++       +++    V+   A+ C ++ G+   L +   G + ++  E+ L
Sbjct: 41  FFVADLGAVVR--KHFCFLKHLPRVRPFYAVGCNSSLGVLKVLAELGLGFSCANKAEMEL 98

Query: 66  G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             H              K        +     + +  +++   K        K+ L I  
Sbjct: 99  VQHIGVPASKIICANPCKQVAQIKYAAKHGVRLLSFDNEVELAKVVKSHPSAKMVLCIAT 158

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S+S   L+       +      +  +     V G+ FH          ++  + +   
Sbjct: 159 QDSHSLNHLSLRFGASLKSCRHLLENAKKSHVEVVGVSFHIGSGCPDPQAYAQSIADARL 218

Query: 185 EF---GHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
            F         +  + LGGG    +      ++            F E   V I  E G 
Sbjct: 219 VFQMGEELGHTMNILDLGGGFPGLEGAKVRFEEMASVINSALDLYFPEGCGVDILAELGR 278

Query: 236 AIVTNTTTL------NTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT 289
             VT+  T+         VLD +   +       S+  H+ + +    ++ ++ NT P  
Sbjct: 279 YYVTSAFTVAVSIVAKREVLDQASREEQTGAAPKSIVYHLDEGVYGVFNSVLFDNTCPTP 338

Query: 290 A--------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
           A               + G +    D   E  +   +++GD + F+++  Y 
Sbjct: 339 ALQKKPSADQPLYSSSLWGPAVEGCDCVAEGLWLPQLQVGDWLVFDNMGAYT 390


>gi|118793145|ref|XP_320707.3| AGAP011808-PA [Anopheles gambiae str. PEST]
 gi|116117238|gb|EAA00694.3| AGAP011808-PA [Anopheles gambiae str. PEST]
          Length = 405

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 51/356 (14%), Positives = 101/356 (28%), Gaps = 26/356 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  +++   ++          K   V    A+KC +   +   L     G   +S  E+ 
Sbjct: 31  PLNVLNLDDIVAKHRNWQ--AKLPTVAPFYAVKCNSHPTILRLLAALGCGFDCASRAELD 88

Query: 65  LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
              E     +   Y    K       A       + F+   +L K          ++ LR
Sbjct: 89  SVLELGVTPDRIVYAHPNKSIGSIVHAKKLGVKRMTFDGSDELEKLAR--HYPEAELILR 146

Query: 122 INPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +    + ++  L         R      ++      +V G+ FH    +    CF   ++
Sbjct: 147 VRHDAAAAQLSLGRKFGCDQVRDARPLLERARELGLSVIGVSFHVGSGSMDAECFYGGIR 206

Query: 181 NIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI---YLEPG 234
              + F        ++E + +GGG    +           + +  ++          EPG
Sbjct: 207 KAIEIFRVGSTLGMKMELLDVGGGYPGANGAL-FDRCAYYINKALKELVPTPVAVIAEPG 265

Query: 235 EAIVTNTTTLNTTVL----------DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
           +  V +  T    V+           +      +            D             
Sbjct: 266 KYYVESAVTALVNVVSKSYEKDVDGAVVRVRYYVDDGLYDTFDWCDDQGSGPLLQEDKRG 325

Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                +++ GR+    D+  E       +IGD + F +   Y        NG   P
Sbjct: 326 APCVRSVIYGRTMCEHDVIREEISLPEHEIGDCLVFPNRGAYAKLLGRGHNGF-RP 380


>gi|213622587|ref|ZP_03375370.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 256

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 71/245 (28%), Gaps = 27/245 (11%)

Query: 146 KCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFT 205
                ++     + G+  H                 + +        +E IS GGG+   
Sbjct: 9   AALAVMQKYRLKLVGIHMHIGSGVDYGHLEQVCGAMVRQVL-ECGQDVEAISAGGGLSIP 67

Query: 206 DK---------DYPVKDFCQRLKEFSE-KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SEN 254
                       Y       R +      ++V++ +EPG  +V  +  L T V  +    
Sbjct: 68  YHEGEEPVDTRHYYGLWNAAREQIARHLGHAVKLEIEPGRYLVAQSGVLVTQVRSVKQMG 127

Query: 255 IKNLVIVDSSVEAHVPDYLLYQES--------ATIYPNTGPYTAMVCGRSCLAGDIF--- 303
            ++ V+VD+     +   +                  N      +V G  C +GD+F   
Sbjct: 128 SRHFVLVDAGFNDLMRPAMYGSYHRISALAADGRALENGPWVETVVAGPLCESGDVFTQQ 187

Query: 304 ----GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
                E      V  GD +   D   Y  +  + +N   +    + +        R  + 
Sbjct: 188 EGGMVETRALPAVIPGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 247

Query: 360 NDYYN 364
            +   
Sbjct: 248 EELLA 252


>gi|145502813|ref|XP_001437384.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124404534|emb|CAK69987.1| unnamed protein product [Paramecium tetraurelia]
          Length = 514

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 51/362 (14%), Positives = 111/362 (30%), Gaps = 33/362 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSLYEV- 63
           + + +  +L N ++          +    A+K      +   +     G    +S  E+ 
Sbjct: 141 FMIYNSNELKNKVNQWKQAL--PWITPYYAIKSNPIDPILKVIVDGPYGTFDCASKGEIS 198

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            +      G    Y+   K+ +          +    +T+ +L K +  A ++     + 
Sbjct: 199 TVIKSGVPGSKIVYSNPVKEEKDIQYAKSMGVEITSADTIDELIKIQKIAPEMKILWRIS 258

Query: 122 INPSVSYSK----FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC---ENKSFLC 174
           I                  + P      K   +I+     ++G+ FH       + SF  
Sbjct: 259 IVEENPEQMATVFSGKFGDDIPDLDAAHKRFQQIQQMGIQLHGIHFHCGSAVQGSSSFGK 318

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
              + K   K    +  ++  + +GGG    +    + +     K  ++    ++  EPG
Sbjct: 319 AIDLAKECMKIGRLYGHKMILLDVGGGFPTGNIQENIIN--ALKKTENDPLGYEVIAEPG 376

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAM--- 291
                NT  L   ++        L    +    H  + +L         N   Y+     
Sbjct: 377 RHFSANTCYLLFRIMTKRIKHGRLCYHVNESLYHSFNCVLMDGITFENENDQLYSVFNSD 436

Query: 292 --------------VCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNG 336
                         + G +C   D   +       +++GD +    +  Y I  K+ FNG
Sbjct: 437 GSQNTQNSDHSNVSIFGMTCDGHDALAKNITLPSDMQVGDWLCMSGMGSYTIGPKSRFNG 496

Query: 337 IN 338
           + 
Sbjct: 497 MK 498


>gi|149202269|ref|ZP_01879242.1| Putative Ornithine decarboxylase [Roseovarius sp. TM1035]
 gi|149144367|gb|EDM32398.1| Putative Ornithine decarboxylase [Roseovarius sp. TM1035]
          Length = 376

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 42/364 (11%), Positives = 96/364 (26%), Gaps = 24/364 (6%)

Query: 1   MIKTP----YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGT 55
           M +TP     Y     +L                 +  A+K      +  + +   +   
Sbjct: 15  MRQTPDAALLY-FSPDQLQATAQAFQAGFPG---LVTYAVKANPGAEVLANLVAAGITAF 70

Query: 56  TSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
             +S  E+             YN   +      V +      + ++  L +      ++ 
Sbjct: 71  DVASPEEMRAVRSVCPAAVLHYNNPVRSVPEIEVAAQMGVRSY-SIDDLRELDKLTGRIA 129

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLM-FHNNCENKSFLC 174
               + +  ++           +         +       +     M FH   +    + 
Sbjct: 130 PDAEITVRLALPVRGAAYDFGAKFGVGPERAAELLRVVADRGFTPSMTFHPGTQCADPVA 189

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP------VKDFCQRLKEFSEKYSVQ 228
           + A +  + +       ++  +++GGG                      +       +  
Sbjct: 190 WGAYIGVVAEVARSAGVRLARLNVGGGFASHRTGTMPNLGAIFTHIGAEVARVFGADAPA 249

Query: 229 IYLEPGEAIVTNTTTLNTTV------LDISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
           +  EPG A+V    +L   V        I  N      +    +   PD +         
Sbjct: 250 LVCEPGRAMVAEAFSLAVRVKALRETGAIFVNDGVYGGLTEIRDIGAPDRITVLAPDGTP 309

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
               P+  +V G +C + D   +       +  GD +    +  Y       FNG  +  
Sbjct: 310 RTGAPHPRVVFGPTCDSIDRLPDPLPLPGDLAEGDYLLIAGMGAYTRCLSTDFNGYGLRD 369

Query: 342 IAVK 345
           +   
Sbjct: 370 VVTV 373


>gi|63002636|dbj|BAD97830.1| ornithine decarboxylase [Prunus persica]
          Length = 330

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 47/334 (14%), Positives = 88/334 (26%), Gaps = 43/334 (12%)

Query: 33  LLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLS 91
             A+KC     +   L     G   +S  E+ +            Y    K        S
Sbjct: 1   FYAVKCNPDPFVLRLLAAMGTGFDCASKAEIDMVLRLGVDPSRIIYAQPCKTKSYVRYAS 60

Query: 92  NCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI 151
                     +    +K K      ++ LRI    S S   L+                 
Sbjct: 61  KQGVRQMTFDNSDELYKIKELFPDAELYLRILTDDSASLCRLSLKFGASLDDTGDLLALA 120

Query: 152 ESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKD 208
                NV G+ FH          F   +++    F         ++ + +GGG       
Sbjct: 121 RKLDLNVVGVAFHVGSGASDPAAFLKAVRDTRFVFDQANALGYDLKTLDVGGGF----VS 176

Query: 209 YPVKDFCQRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISE-------NIKNL 258
               D    L    ++Y      +  EPG   V++  T+   V+               +
Sbjct: 177 ETFDDMAAVLSVALDEYFPPSVRVIGEPGRYYVSSAFTIACNVIARRSVEDKALGVNSYM 236

Query: 259 VIVDSSVEAHVPDYLLYQESATIYPNTG------------------------PYTAMVCG 294
           + ++  V  +    +   +                                 P    + G
Sbjct: 237 LYLNDGVYGNFSSIMFDHQHPIPRVLKAQNDTLATYNNHSDAVAAYDAATKLPLEYSIWG 296

Query: 295 RSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYN 327
            +C   D   E +   + + +GD + F ++  Y 
Sbjct: 297 PTCDGIDCISESWTCAQTLDVGDWLYFPNMGAYT 330


>gi|218458428|ref|ZP_03498519.1| diaminopimelate decarboxylase protein [Rhizobium etli Kim 5]
          Length = 179

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 20/155 (12%), Positives = 43/155 (27%), Gaps = 5/155 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP+Y+     L  +         +    +  A+K  +   +  TL +   G    S  
Sbjct: 25  VGTPFYVYSTATLERHYRVFSEAFADMDSMVCYAMKANSNQAVLKTLGRLGAGIDVVSEG 84

Query: 62  EVMLGHEK-FGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HK 116
           E+              ++           A+ +        +  +L     +A       
Sbjct: 85  ELRRALAADIPASRIMFSGVGKTPSEMDFALEAGIYCFNVESEPELEILNQRAVSAGKKA 144

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI 151
            +  RINP V           +  ++ G   +   
Sbjct: 145 PVSFRINPDVDAKTHSKISTGKKENKFGISWERAR 179


>gi|333015577|gb|EGK34916.1| diaminopimelate decarboxylase domain protein [Shigella flexneri
           K-227]
          Length = 231

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 67/223 (30%), Gaps = 27/223 (12%)

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKD 213
            H                 + +    F   ++ IS GGG+             + Y    
Sbjct: 1   MHIGSGVDYAHLEQVCGAMVRQVI-EFGQDLQAISAGGGLSIPYQQGEEAVDTEHYYGLW 59

Query: 214 FCQRLKEFSE-KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPD 271
              R +      + V++ +EPG  +V  +  L T V  +     ++ V+VD+     +  
Sbjct: 60  NAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRP 119

Query: 272 YLLYQESA--------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGD 316
            +                  +      +V G  C +GD+F        E      VK GD
Sbjct: 120 AMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGD 179

Query: 317 RISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
            +   D   Y  +  + +N   +    + +        R  + 
Sbjct: 180 YLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 222


>gi|83956357|ref|ZP_00964782.1| Orn/DAP/Arg decarboxylase, family 2 [Sulfitobacter sp. NAS-14.1]
 gi|83839405|gb|EAP78588.1| Orn/DAP/Arg decarboxylase, family 2 [Sulfitobacter sp. NAS-14.1]
          Length = 411

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 57/404 (14%), Positives = 117/404 (28%), Gaps = 61/404 (15%)

Query: 18  LDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGGETHAY 77
           L         +  K+  + K      +    +++  G    S +E+            ++
Sbjct: 2   LKVWNNTFAKS--KVYWSYKTNYMPEVCRAAHEHGLGADFVSGFELEHARRMCPEGPFSF 59

Query: 78  NVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK---------KIGLRINPSVS 127
           N    +  E+   +    TI  + + +++  +    +              G+ +  S  
Sbjct: 60  NGPLKRKSELLQAIEMGATINVDLLEEIDAIRTIVSQRPTLTPRLGIRVNPGVPLFDSHD 119

Query: 128 YSKFILADPNRPFSRLGEK--------CKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
            S       +   S+ G            +K+      V+ L  H + +  +   F A L
Sbjct: 120 TSFLEKHSDSISVSKFGWPISDGAARIAVEKVIDAGLTVSALHCHLSSQITNHEHFLAAL 179

Query: 180 K---NIEKEFGHFITQIEWISLGGGIH-------------------------FTDKDYPV 211
           +   +   +      ++E I +GGG                              + + +
Sbjct: 180 RPVLDFASDLIGQGVELEEIDIGGGFGVKGLVRDKIGWWGQLRERMGEPLPQEESQAFDM 239

Query: 212 KDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH 268
             F   LK    +     + I  EPG  +V++   L T V+ I        +V       
Sbjct: 240 PSFATSLKTELSERGLEDLTISCEPGRYLVSDAMALLTRVVGIKRLEGKTWLVVDGGLNI 299

Query: 269 VPDYLLYQESATIYPNTG--------PYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRIS 319
           +P     +     + N               + G  C  GD+          +  GD + 
Sbjct: 300 LPTASFGERRGLRFFNHEGEFPPSDYTEKCSIGGPLCYEGDVIMPSAMMPATIAAGDLVM 359

Query: 320 FEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363
             D   Y ++R   FN +        +   T    R  +Y D +
Sbjct: 360 ISDAGAYTVSRSTNFNQL-RAAAVSFDGSDTQTVWRRENYADVF 402


>gi|83859249|ref|ZP_00952770.1| ornithine decarboxylase, putative [Oceanicaulis alexandrii
           HTCC2633]
 gi|83852696|gb|EAP90549.1| ornithine decarboxylase, putative [Oceanicaulis alexandrii
           HTCC2633]
          Length = 418

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 40/334 (11%), Positives = 94/334 (28%), Gaps = 22/334 (6%)

Query: 23  YIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAYNV-- 79
           + + N   ++L A+K   +  + DTL          +SL EV L   +    T A+    
Sbjct: 34  WFQNNFPGEVLYAVKSNPSAWVIDTLYAAGMRWFDVASLNEVELIASRCPDATMAFMHPV 93

Query: 80  -AYKDCEIDAVLSNCDTIIFNTVSQLNKF---KDKAQKLHKKIGLRINPSVSYSKFILAD 135
            + +              + +  ++L K       A+ L   + + ++   +        
Sbjct: 94  KSRRAINKAYFDYGVRIFVLDCEAELEKILVETGYAKDLTLVVRIAVSNDGATLPLAGKF 153

Query: 136 PNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEW 195
                  +    + ++ ++   V    FH   +  +   +   + ++ +        ++ 
Sbjct: 154 GASEDDAVELIQRARVYADELGV---SFHVGSQCMAPSAYRGAMLDVSRLIKRAAVTVDI 210

Query: 196 ISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI 255
           + +GGG              + +      +   + LE  +        L      I   +
Sbjct: 211 VDVGGGFPVAYPGMTPPPLSEYVAAIENAFEEMMVLENADLWCEPGRALCAESTSILTRV 270

Query: 256 KNLVIVDSSVEA-----HVPDYLLYQESATIYPNTGPYT------AMVCGRSCLAGDIFG 304
           + +      +             +                       + G +C A D   
Sbjct: 271 ELVKGDQVYLNDGAYGTLFDLVHMKWPYPIRVHRAKGEPSGQTAGFRLYGPTCDAIDAVS 330

Query: 305 EFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGI 337
                   +  GD I F  +  Y +     FNG 
Sbjct: 331 APVELPVDLSEGDVIEFAMLGAYGVAMATRFNGF 364


>gi|312972942|ref|ZP_07787115.1| diaminopimelate decarboxylase domain protein [Escherichia coli
           1827-70]
 gi|310332884|gb|EFQ00098.1| diaminopimelate decarboxylase domain protein [Escherichia coli
           1827-70]
          Length = 231

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 67/223 (30%), Gaps = 27/223 (12%)

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKD 213
            H                 + +    F   ++ IS GGG+             + Y    
Sbjct: 1   MHIGSGVDYAHLEQVCGAMVRQVI-EFGQDLQAISAGGGLSVPYQQGEEAVDTEHYYGLW 59

Query: 214 FCQRLKEFSE-KYSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPD 271
              R +      + V++ +EPG  +V  +  L T V  +     ++ V+VD+     +  
Sbjct: 60  NAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGFNDLMRP 119

Query: 272 YLLYQESA--------TIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGD 316
            +                  +      +V G  C +GD+F        E      VK GD
Sbjct: 120 AMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGD 179

Query: 317 RISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
            +   D   Y  +  + +N   +    + +        R  + 
Sbjct: 180 YLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 222


>gi|163741356|ref|ZP_02148747.1| Putative Ornithine decarboxylase [Phaeobacter gallaeciensis 2.10]
 gi|161385090|gb|EDQ09468.1| Putative Ornithine decarboxylase [Phaeobacter gallaeciensis 2.10]
          Length = 383

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 45/358 (12%), Positives = 103/358 (28%), Gaps = 23/358 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGTTSSSLYEV 63
           P      + L    +   +        +  A+K      +  + +   +     +S  E+
Sbjct: 23  PILYFSPRVLHEVANRFQHGFPG---LVTYAVKANPHPAVLSNLVAAGITAFDVASPAEM 79

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                        YN   +     A  +     +   +  S+L+K  D  +     +   
Sbjct: 80  DAVRAASPDAVMHYNNPVRSDVEIAAGIAHGVASWSVDEPSELDKLADVPKSCEIAVRFA 139

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +  + +   F       P   +    +   E     +    FH   + +    +   +  
Sbjct: 140 LPVAGAAYDFGSKFGAEPDMAIELLKRVAAEGWTPAL---CFHPGTQCEDESAWVEYVHA 196

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYP------VKDFCQRLKEFSEKYSVQIYLEPGE 235
            ++       +I  +++GGG                       +         +  EPG 
Sbjct: 197 AKRIIDAAGVKIARLNVGGGFAANRDGVAPDLEKVFAAISAAAEAAFGAEQPLLICEPGR 256

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH--VPDYLLYQESATI-----YPNTGPY 288
           A+V+ + TL   +  + +  + + + D        + D  L      +            
Sbjct: 257 AMVSESFTLAARIKGMRKAGEVVFLNDGIYGGLVDIRDMGLPGRVEVVAADGTRRGADAQ 316

Query: 289 TAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
             +V G +C + D   +        +IGD + F  +  Y+      FNG  +  +A  
Sbjct: 317 PRVVFGPTCDSLDRLPDGLPLPRDTQIGDYVLFPGLGAYSSAMSTQFNGYGLSDVATV 374


>gi|240172617|ref|ZP_04751276.1| putative S-adenosylmethionine decarboxylase [Mycobacterium kansasii
           ATCC 12478]
          Length = 647

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 50/337 (14%), Positives = 93/337 (27%), Gaps = 20/337 (5%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           M +TPY  ID  ++ +NL             +  A+K      +   L         +S+
Sbjct: 1   MRETPYLTIDLARVRDNLQALRAALPE--ASIRYAVKANPGEPVLRLLAGEGAEFDVASV 58

Query: 61  YEVMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+         G   A+            A  S     +F+T   L    + A     +
Sbjct: 59  GEIDACRLAGIDGSRLAFGNTIKKPAAVGHAYASGVRRFVFDTHEGLAAIAEHAPGASVE 118

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
             +      S + F       P +  G   +            + FH   +      +  
Sbjct: 119 CRIAPAFPSSVTPFGHKFGCAPDAAAGLLTR--ARRLGLRPVAIAFHVGSQQLDPAAWDL 176

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYL 231
            ++     F      +E  + GGG          +           L  +      ++ +
Sbjct: 177 GIRCCADIFEQLGGALEV-NAGGGFPVPYATVAPQLPVLADAITSALTRYFGADRPRLVV 235

Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS---VEAHVPDYLLYQESATIYPNTGP- 287
           EPG  +V +   +   V+ +         V                Y          G  
Sbjct: 236 EPGRLLVGSAGIIAAEVVSVRTGTDGRRWVYLDIGRYGGLAETENEYIRYRLRTDRDGDP 295

Query: 288 -YTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFED 322
              A+V G +C   D+    +     ++ GD +  ED
Sbjct: 296 AADAVVAGPTCDGDDVLYRSYALPVTLRAGDGVQIED 332


>gi|212212809|ref|YP_002303745.1| ornithine decarboxylase [Coxiella burnetii CbuG_Q212]
 gi|212011219|gb|ACJ18600.1| ornithine decarboxylase [Coxiella burnetii CbuG_Q212]
          Length = 400

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 53/351 (15%), Positives = 115/351 (32%), Gaps = 24/351 (6%)

Query: 19  DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAY 77
               Y     G ++L A+K      +   ++ +       +S  E+ +  E   G    +
Sbjct: 32  RAVNYFCTQFGGRVLYAVKTNPEKHVIQAVHAHGVTAFDVASYEEIRIIKEYAPGAELYF 91

Query: 78  NVAYKDCEID---AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG-LRINPSVSYSKFIL 133
               K                   + + +L K     +        LR+    ++++F L
Sbjct: 92  MHPVKSPHAIREAYFEYGVRHFSLDCLEELRKILRHTENAKDLCLHLRLAIPNTFAEFNL 151

Query: 134 ADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQI 193
           A+          +   ++      + G+ FH   +      +   ++  +K       +I
Sbjct: 152 AEKFGINLHEAPELLKQLRKAAYQL-GVTFHVGSQCMHPDAYRIAIRMADKVINEAQVEI 210

Query: 194 EWISLGGGIHFTDK--------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLN 245
           E+ ++GGG               Y      +  K       +Q+  EPG ++V  +T++ 
Sbjct: 211 EFFNVGGGFPSIYPGMIPPALTIYFEAIHDEFAKVAQRHPGIQLLCEPGRSLVAESTSVI 270

Query: 246 TTVLDISENIKNLVI------VDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLA 299
             V    ++I  +         D+ +   +    L +   T   +  P++    G +C +
Sbjct: 271 VNVELRKDDILYINDGTYGSLFDAGIPHFIFPVHLLRPKHTADVDLLPFSFY--GPTCDS 328

Query: 300 GDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN-MPTIAVKNVD 348
            D   G F+    +K GD I    +  Y       FNG      + + + +
Sbjct: 329 LDYMKGPFYLPNDIKAGDYIEIGQMGAYGRTLSTAFNGFKQREGVIMVSDE 379


>gi|327269438|ref|XP_003219501.1| PREDICTED: antizyme inhibitor 1-like isoform 2 [Anolis
           carolinensis]
          Length = 451

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 50/374 (13%), Positives = 114/374 (30%), Gaps = 34/374 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  KL+ +      +     +K    +KC +  G+ + L     G   SS  E+ L
Sbjct: 40  FFVGDLGKLIKHHIHWQNVMAP--IKPFYNVKCNSTPGVLEILAALGTGFACSSKNEMAL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             +     E   ++   K        +     +    ++L   K      + K+ L I  
Sbjct: 98  VQDLGISSENILFSNPCKQASQIKYAAKTGVNVLTCDNELELKKIARNHPNAKLLLHIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
                   +        +      +  +     + G+ F+ +   K    +   + +   
Sbjct: 158 EDINGGEEMNMMFGTTLKNCRHLMECAKELNVQIIGVKFNVSNSCKEPQVYKHAISDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQ---RLKEFSEKYSVQIYLEPGEAIV 238
            F     F   +  +++G G    + D    +          F E+  V +  E G   V
Sbjct: 218 VFDMAEEFGFTMNMLNIGSGFTDYEFDLEKINHVVSPLLDIYFPEESGVNVIAEAGCYYV 277

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--DYLLYQESATIYP------------- 283
           ++  TL   ++          ++  S + ++P  D +                       
Sbjct: 278 SSAFTLAVNIIAKKAVQSTEPLLFKSKQNNLPGDDQVFMYYINDGVYGSFASKLSDNLTT 337

Query: 284 ----------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
                     +   + + + G SC   D   E      + +GD + F+++    +  ++ 
Sbjct: 338 IPEVHKKYKEDEPLFASSLWGPSCDELDQIVENCLLPELNVGDWLLFDNMGSGTLGEQSA 397

Query: 334 FNGINMPTIAVKNV 347
           FN    P +     
Sbjct: 398 FNDFQRPPVYYIMS 411


>gi|289644267|ref|ZP_06476354.1| Orn/DAP/Arg decarboxylase 2 [Frankia symbiont of Datisca glomerata]
 gi|289505915|gb|EFD26927.1| Orn/DAP/Arg decarboxylase 2 [Frankia symbiont of Datisca glomerata]
          Length = 562

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 55/414 (13%), Positives = 94/414 (22%), Gaps = 72/414 (17%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTL----------------- 48
            Y+ D      N              +  A+K      + D L                 
Sbjct: 73  AYIYDLDVAAGNAARLKAALP-PWAAIFYAVKANGYPPVLDALAAGHGHGHGAQQAHSAQ 131

Query: 49  -----------NQYMDGTTSSSLYEVMLGHE-----KFGGETHAYNVAYK-----DCEID 87
                       Q +DG   +S +E+ L  +                             
Sbjct: 132 HTGSTGRSLPTGQGVDGFEVASSHEIQLALDSAQRIGRPARIVVSGPGKSVPLLATLVEA 191

Query: 88  AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEK 146
           A      T+   +  +L +    A +  ++I + +  + S      +       S  G  
Sbjct: 192 ARAGAEMTVNVESPGELRRLNHVAGRAGRQIPVTLRVNPSRVALAGSLRMGGEASAFGIP 251

Query: 147 CKD-------KIESEIKNVNGLMFHNNCENK----SFLCFSAMLKNIEKEFGHFITQIEW 195
             D              +V G   H    N             L             +  
Sbjct: 252 EADVPDVLAIARSLPWVDVAGFHVHAVSGNLDAAAHLDYVRWCLGYAADTAAAHGVDLRV 311

Query: 196 ISLGGGIHFT-------DKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248
           + +GGG+          +  + +  F   L+       V++  EPG  +V +       V
Sbjct: 312 VDVGGGLGVPFEPDRRGECPFDLDAFAAGLRATPVPAGVRVLFEPGRWLVADCGAYAAEV 371

Query: 249 LDISENIKNLVIVDSSVEAHV-PDYLL------------YQESATIYPNTGPYTAMVCGR 295
            D+        +V      H                           P+       V G 
Sbjct: 372 TDVKHAHGTDFVVLRGGIHHFQLPASWEIVHNFGVVAVDDWPYDFPRPDVAGRPVTVVGE 431

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGINMPTIAVKNVD 348
            C   D          V+ GD + F     Y        F G   P     + D
Sbjct: 432 LCTPEDTLARDITVDAVRAGDIVVFPMAGAYGYEFAMQGFLGHPPPVRVAVSRD 485


>gi|160872358|ref|ZP_02062490.1| decarboxylase, pyridoxal-dependent [Rickettsiella grylli]
 gi|159121157|gb|EDP46495.1| decarboxylase, pyridoxal-dependent [Rickettsiella grylli]
          Length = 395

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 47/358 (13%), Positives = 98/358 (27%), Gaps = 32/358 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSLYEV 63
           P ++     +   ++      +    ++L A+K      +   L+         +S  E+
Sbjct: 17  PVFVFRPNIMECAINYFRTRFQG---RILYAVKTNPERQVIHLLHHQGIHDFDVASYEEI 73

Query: 64  MLGHEKFGGETHAYNVAYKD---CEIDAVLSNCDTIIFNTVSQLNKFKDK---AQKLHKK 117
            +           +    K     +             +++ +L K       A+ L   
Sbjct: 74  RMIKSILPDAGLYFMHPVKSSFAIQEAYFNYGVRHFALDSLDELKKIVRYTNNAKDLCLH 133

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
           + L I  + +                    K +  +    +    FH   +      +  
Sbjct: 134 LRLAIPNTFAEFNLSAKFGIHLDEAPELLKKVRKVAYKLGIT---FHVGSQCMHPDAYRI 190

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS--------VQI 229
            ++   K  G     IE+  +GGG                     E++         +++
Sbjct: 191 AIRLANKLIGQSKIAIEYFDVGGGFPSIYPGMTPPPLEIYFNVIHEEFKEISKKFPTIEL 250

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY- 288
             EPG  +V  +T++   V    +N   +          + D  +      +      Y 
Sbjct: 251 LCEPGRCLVAESTSVIVRVESRKKNQLYINDGTYGS---LFDAGIPHFIFPVRLIKKSYR 307

Query: 289 ------TAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                      G +C   D   G F+    +K G+ I    V  Y       FNG   
Sbjct: 308 KNKDLIPYSFYGPTCDCLDYMQGPFYLPSDIKEGNYIEIGQVGAYGRTLSTGFNGFKH 365


>gi|254503042|ref|ZP_05115193.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein
           [Labrenzia alexandrii DFL-11]
 gi|222439113|gb|EEE45792.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein
           [Labrenzia alexandrii DFL-11]
          Length = 406

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 51/362 (14%), Positives = 102/362 (28%), Gaps = 32/362 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSSLYEV 63
           P Y      L  +      +      K   A+K      +   L     D    +S  E 
Sbjct: 19  PIYCFRPSVLRADAQNFKKLFPG---KTAYAVKTNGEPFVLKELAAAGYDCFDVASPAEF 75

Query: 64  MLGHEKFGGETHAYNVAYK---DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG- 119
               E        Y    K   D  +         +  +   ++ K     + L      
Sbjct: 76  AAVREASPKAEMLYMHPIKAQSDIRLALEQYGIRVMSLDHEDEVAKILRIVRALDIDPAK 135

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN--VNGLMFHNNCENKSFLCFSA 177
           + +   ++       + ++ F        + ++   +     GL FH   + +    +  
Sbjct: 136 ITLFVRIATKGHAAYELSKKFGAAPGHAVELLQRIHRIGFKCGLCFHVGSQIEEPETYER 195

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---------LKEFSEKYSVQ 228
            L + +         I  + +GGG        P +              ++    +++  
Sbjct: 196 ALASADWIRSRAGVPIVELDVGGGFPAVYGHDPRRKVPDLPTLEELMGQIRSDIAEWAFD 255

Query: 229 IYL---EPGEAIVTNTTTLNTTVL-----DISENIKNLVIVDSSVEAHV-PDYLLYQESA 279
                 EPG  +V  + +L   VL      +  N      +  S    +        + A
Sbjct: 256 DIPLVAEPGRVVVARSISLIVRVLLKKGRRLYINDGIWASLSDSWTGKITLPARFIPDPA 315

Query: 280 TIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFN 335
               +          VCG +C + DI     +    V  GD I    +  Y+++ +  FN
Sbjct: 316 RRTRSGKAGNIVPFKVCGATCDSVDILSRPFWLPETVDTGDWIEIGHIGAYSLSLRTRFN 375

Query: 336 GI 337
           G 
Sbjct: 376 GF 377


>gi|242071387|ref|XP_002450970.1| hypothetical protein SORBIDRAFT_05g021830 [Sorghum bicolor]
 gi|241936813|gb|EES09958.1| hypothetical protein SORBIDRAFT_05g021830 [Sorghum bicolor]
          Length = 426

 Score =  119 bits (298), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 44/363 (12%), Positives = 96/363 (26%), Gaps = 33/363 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE- 62
           T +++     +++             V+   A+KC     +   L     G   +S  E 
Sbjct: 55  TAFHVFHINTVVDLFSAWRRAL--PDVRPFYAVKCNPDPALLGALAALGAGFDCASRAEM 112

Query: 63  -VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
             +L      G+    N    +  ++   +        T    ++    A+       L 
Sbjct: 113 EAVLALGVGVGDLIYANPCKAEPHLEYAAAAGV--ALATYDTESEVAKVARCHPNCELLL 170

Query: 122 INPSVSYSKFILADPNRPF--SRLGEKCKD------KIESEIKNVNGLMFHNNCENKSFL 173
                     +          ++ G    +        +     V G+ FH         
Sbjct: 171 RLKGPDGGTTVAGGGRGGDLMNKYGAHADEVSPLLRAAQRAGVRVAGVSFHVGSPVSRSR 230

Query: 174 CFSAMLKNIEKEFGHF------ITQIEWISLGGGIHFTDKDYPVKDF-----CQRLKEFS 222
                                 +  +  + +GGG                       +  
Sbjct: 231 VGVYRGAIESARAAFDAAAALGMPPMRVLDIGGGFSAGAAFDEAAAVINGALADAFGDLL 290

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQE 277
               V++  EPG        TL   V+      +            S+   + D+ + + 
Sbjct: 291 RCRRVEVIAEPGRYFAETAFTLAARVIGRRARGEAREYWIDDGLYGSLNNVLMDHKVPRP 350

Query: 278 SATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                        +++ V G +C + D     +    + +GD + F+D+  Y+    + F
Sbjct: 351 RPLAAGGEEKTTTHSSTVFGPTCDSQDQVVTGYPLPEMSVGDWLVFDDMGAYSTGAGSKF 410

Query: 335 NGI 337
           NG 
Sbjct: 411 NGF 413


>gi|327269436|ref|XP_003219500.1| PREDICTED: antizyme inhibitor 1-like isoform 1 [Anolis
           carolinensis]
          Length = 449

 Score =  119 bits (298), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 48/372 (12%), Positives = 111/372 (29%), Gaps = 32/372 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  KL+ +      +     +K    +KC +  G+ + L     G   SS  E+ L
Sbjct: 40  FFVGDLGKLIKHHIHWQNVMAP--IKPFYNVKCNSTPGVLEILAALGTGFACSSKNEMAL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             +     E   ++   K        +     +    ++L   K      + K+ L I  
Sbjct: 98  VQDLGISSENILFSNPCKQASQIKYAAKTGVNVLTCDNELELKKIARNHPNAKLLLHIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
                   +        +      +  +     + G+ F+ +   K    +   + +   
Sbjct: 158 EDINGGEEMNMMFGTTLKNCRHLMECAKELNVQIIGVKFNVSNSCKEPQVYKHAISDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQ---RLKEFSEKYSVQIYLEPGEAIV 238
            F     F   +  +++G G    + D    +          F E+  V +  E G   V
Sbjct: 218 VFDMAEEFGFTMNMLNIGSGFTDYEFDLEKINHVVSPLLDIYFPEESGVNVIAEAGCYYV 277

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--------------- 283
           ++  TL   ++          ++  + +    D +                         
Sbjct: 278 SSAFTLAVNIIAKKAVQSTEPLLFKTEQTQGDDQVFMYYINDGVYGSFASKLSDNLTTIP 337

Query: 284 --------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
                   +   + + + G SC   D   E      + +GD + F+++    +  ++ FN
Sbjct: 338 EVHKKYKEDEPLFASSLWGPSCDELDQIVENCLLPELNVGDWLLFDNMGSGTLGEQSAFN 397

Query: 336 GINMPTIAVKNV 347
               P +     
Sbjct: 398 DFQRPPVYYIMS 409


>gi|269964928|ref|ZP_06179098.1| Diaminopimelate decarboxylase [Vibrio alginolyticus 40B]
 gi|269830404|gb|EEZ84628.1| Diaminopimelate decarboxylase [Vibrio alginolyticus 40B]
          Length = 222

 Score =  119 bits (298), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 53/197 (26%), Gaps = 6/197 (3%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +  G+ +TL +   G    S  E
Sbjct: 27  GTPLYVYSRATLERHWKAFDSAVGQHPHLVCYAVKANSNLGVLNTLARLGSGFDIVSGGE 86

Query: 63  V-MLGHEKFGGETHAYNVAYKDC--EIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           +  +       +   ++   K       A+          +  +L +    A +L     
Sbjct: 87  LERVIAAGGDPKKVVFSGVGKTPAEMKRALELGIKCFNVESEPELERLNKVAGELGVIAP 146

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
           I LRINP V              ++ G       +      +    +          FSA
Sbjct: 147 ISLRINPDVDAKTHPYISTGLRDNKFGIAFDRAPDVYKFAQSLPNLNV-QGIDVPHWFSA 205

Query: 178 MLKNIEKEFGHFITQIE 194
                           +
Sbjct: 206 DQYRPIYRRDRPFIGPD 222


>gi|300787100|ref|YP_003767391.1| diaminopimelate decarboxylase [Amycolatopsis mediterranei U32]
 gi|299796614|gb|ADJ46989.1| diaminopimelate decarboxylase [Amycolatopsis mediterranei U32]
          Length = 442

 Score =  119 bits (297), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 57/397 (14%), Positives = 112/397 (28%), Gaps = 42/397 (10%)

Query: 9   IDKQKLLNNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67
           +D   +   ++         G V+  +A K      +   L         +S  E  +  
Sbjct: 34  VDLATVREAVEDLTEAFAPLGRVQHTVAAKACGLAPLLRFLGDLGIDAEVASPGETAVAE 93

Query: 68  EKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGLRIN 123
                G      + A    E+   L+    +  +   +L +      A      +GLRIN
Sbjct: 94  AAGLRGPRLVLDSPAKTTAELAHALAEGTAVNADNFQELARLDRLVGAAPPRSVLGLRIN 153

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKD-----KIESEI---KNVNGLMFHNNCENKSFLCF 175
           P V   +          S+ G   +D      +         +  L  H   +       
Sbjct: 154 PQVGAGRIGDTSTATAASKFGIPLRDNGSRALLREAFTRRPWLTRLHVHVGSQGCPPELM 213

Query: 176 SAMLKNIEKEFGHFITQIEWI-----SLGGGIHFTDKDY-PVKDFCQRLKEFSEKYS--- 226
           +  +    +       +  +       LGGG+        P   +   +     +     
Sbjct: 214 ADGVAAAHELAEEINAEAGYRQVTSLDLGGGLPVDFTSDAPGPTYAGYVATLLARVPSLG 273

Query: 227 ---VQIYLEPGEAIVTNTTTLNTTVLD----------ISENIKNLVIVDSSVEAHVPDYL 273
                   E G +++  +  L +TV            ++     +         H     
Sbjct: 274 DGRYAFVTEFGRSLLAKSGFLVSTVEYTKVAGGRHIAVTHAGGQVAARTVLQPEHW-PLR 332

Query: 274 LYQESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
           +    AT  P TGP  A  + G  C AGD+         ++ GD +   D   Y      
Sbjct: 333 IGAFDATGVPKTGPEVAQDIAGPLCFAGDLLARERPLPLLEPGDLVVAHDTGAYYFGAHY 392

Query: 333 WFNGINMPTIA--VKNVDGTIK---AIREFSYNDYYN 364
            +N +  P +     +  G ++     R  + ++   
Sbjct: 393 AYNTLPRPAVYGFTVSGRGDVEFTPLRRAQTLDELVA 429


>gi|307292864|ref|ZP_07572710.1| Orn/DAP/Arg decarboxylase 2 [Sphingobium chlorophenolicum L-1]
 gi|306880930|gb|EFN12146.1| Orn/DAP/Arg decarboxylase 2 [Sphingobium chlorophenolicum L-1]
          Length = 397

 Score =  119 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 48/359 (13%), Positives = 103/359 (28%), Gaps = 27/359 (7%)

Query: 26  KNAGVKLLLALKCFAAWGMFDTL-NQYMDGTTSSSLYEVMLGHEKFGG--ETHAYNVAYK 82
           +    + L A+K   +  +  TL    +     +S+ EV L  E   G  +    +    
Sbjct: 37  EKFPGRSLYAVKANPSPDLIRTLFASGITHFDVASIAEVRLVAEALEGQGKLCFMHPVKA 96

Query: 83  DCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF 140
           +  +     +    T   +++ +L K   +A      + L +   VS     L+  ++  
Sbjct: 97  EEAVAEAYHVHGVRTFSLDSMDELAKIM-RATNDATDLELCVRLRVSSEHSELSLASKFG 155

Query: 141 SRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISL 198
           + LGE  ++ + +  +  +  G+ FH   +  S   +S  ++ +          ++ + +
Sbjct: 156 AELGET-RELLMATRQAADALGICFHVGSQAMSPQAYSDAIERVRAAIVDAAVTVDIVDV 214

Query: 199 GGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
           GGG                       +         E        L+     +   ++  
Sbjct: 215 GGGFPSVYPGMEPPALEAYFDAIHRGFESLPVSYSSELWCEPGRALSAEYSSVVVRVERR 274

Query: 259 VIVDSSVEA-----HVPDYLLYQESATIYPNTGPYT-----AMVCGRSCLAGDIF-GEFH 307
              +  +             +                        G +C   D   G F 
Sbjct: 275 RGTELYINDGAYGALFDAAHIGWRFPVALLREEESEAELTGFSFYGPTCDDMDHMVGPFM 334

Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-------GTIKAIREFSY 359
             + V+ GD I    +  Y    +  FNG     I     +        T    R  + 
Sbjct: 335 LPEDVQAGDYIEIGMLGAYGAAMRTGFNGFTSEAIIEVEDEPMASLYVDTAPVRRRATV 393


>gi|239993649|ref|ZP_04714173.1| putative diaminopimelate decarboxylase [Alteromonas macleodii ATCC
           27126]
          Length = 180

 Score =  119 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 38/173 (21%), Positives = 60/173 (34%), Gaps = 10/173 (5%)

Query: 199 GGGIHFTDKDYPVKDFCQRLKEFSEKY----SVQIYLEPGEAIVTNTTTLNTTVLDISE- 253
           GGG+  T  +          +  +EK     ++++ LEPG AI  N   L T V  I E 
Sbjct: 1   GGGLGVTYNNEQPPHPKAYAQAMAEKMVGRENLKLILEPGRAIAANAGILVTEVEFIKEG 60

Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFE 309
             K+  IVD+++   +   L       I         P    V G  C  GD  G+    
Sbjct: 61  EEKSFAIVDAAMNDLLRPALYSAWQKIIPVKEETTATPRIYDVVGPVCETGDFIGKDREL 120

Query: 310 KPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
             ++  D ++      Y     + +N    P   + + D  I         D 
Sbjct: 121 A-IEPTDLLAVRSAGAYGFVMASNYNSRCRPAEIMVDGDKAIVVREREKQKDL 172


>gi|118371177|ref|XP_001018788.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain
           containing protein [Tetrahymena thermophila]
 gi|89300555|gb|EAR98543.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain
           containing protein [Tetrahymena thermophila SB210]
          Length = 636

 Score =  119 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 61/364 (16%), Positives = 113/364 (31%), Gaps = 37/364 (10%)

Query: 6   YYLI-DKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           + +    + L   L+      K + ++   ALK      + + L     G   +S  E+ 
Sbjct: 237 FLVYNSHEALRK-LNAWRS--KLSWIQPFYALKSNPIDPLVEDLCSNGAGLDVASQGEIK 293

Query: 65  LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            G E         Y+   K+ +    A  +N      +T  ++ K    A  +     + 
Sbjct: 294 KGLEMGISASNMIYSNPVKEEKDILYAAQNNVLYTTADTFDEIVKIHTLAPNMKILWRIS 353

Query: 122 INPSVSYS-KFILADPNRPFSRLGEKCKD----KIESEIKNVNGLMFHNNC---ENKSFL 173
           I    S     + ++         E          +     ++G+ FH       + SFL
Sbjct: 354 ITEDNSQQLATVFSNKFGDDITSLEDAHQKFKFIAQELGVRLHGIHFHCGSGKNGSSSFL 413

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
               M +   +    +   +E + LGGG    D     K         ++    ++  EP
Sbjct: 414 KAVNMARKCIEIGRQYGHAMEILDLGGGYPSGD--LNDKFIANLKDTCNDPLGYRVIAEP 471

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAM-- 291
           G    + T  L T +L             +    H  + +L    +    N   Y+ +  
Sbjct: 472 GRHFSSQTCYLFTRILAKRSKQGKTCFHVNDSLYHSFNCVLMDGVSFENDNDQFYSVVNN 531

Query: 292 -----------------VCGRSCLAGDIFGEFH-FEKPVKIGDRISFEDVAGYNINRKNW 333
                            V G +C   D+      F    K+GD + F  +  Y    K+ 
Sbjct: 532 NTLEQSEINKNSMINSSVFGMTCDGADVIARNVGFCGDAKVGDWLCFSGMGSYTFGPKSA 591

Query: 334 FNGI 337
           FNG+
Sbjct: 592 FNGM 595


>gi|118590930|ref|ZP_01548330.1| ornithine decarboxylase [Stappia aggregata IAM 12614]
 gi|118436452|gb|EAV43093.1| ornithine decarboxylase [Stappia aggregata IAM 12614]
          Length = 406

 Score =  119 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 51/362 (14%), Positives = 100/362 (27%), Gaps = 32/362 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSSLYEV 63
           P Y      L ++      +      K   A+K      + + L +        +S  E 
Sbjct: 19  PVYCFRPDVLKHDAQQFQSLFPG---KTAYAVKTNGEPFVLEALAKAGISCFDVASPAEF 75

Query: 64  MLGHEKFGGETHAYNVAYK---DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG- 119
               +        Y    K   D  +        T+  +   ++ K     + L    G 
Sbjct: 76  ASVKKAAPKAEMLYMHPIKAQSDIRLALETYGIRTLSLDHEDEVAKILRIVRALDIDPGT 135

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN--VNGLMFHNNCENKSFLCFSA 177
           + +   ++       + ++ F        + ++   +     GL FH   + +    +  
Sbjct: 136 ITLFVRIATKGHAAYELSKKFGAAPGHAVELLQRINRIGFKCGLCFHVGSQIEEPETYER 195

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---------LKEFSEKYSV- 227
            L + +         I  + +GGG        P +   +          LK     +   
Sbjct: 196 ALASADWIRSRAGVPIVELDVGGGFPAVYGHDPRRKVPEMPTLEALMGQLKADIADWQFD 255

Query: 228 --QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI---------VDSSVEAHVPDYLLYQ 276
              +  EPG  IV  + +L   VL        +               +           
Sbjct: 256 DLPLVAEPGRVIVARSISLIVRVLLKKGRRLYINDGIWASLSDSWTGKITLPARFIPDPA 315

Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFN 335
                          VCG +C + DI     +    V  GD I    +  Y+++ +  FN
Sbjct: 316 RKTRAGQPDKIVPFKVCGATCDSVDILSRPFWLPETVDTGDWIEIGHIGAYSLSLRTRFN 375

Query: 336 GI 337
           G 
Sbjct: 376 GF 377


>gi|255994175|ref|ZP_05427310.1| putative pyridoxal-dependent decarboxylase, C- sheet domain protein
           [Eubacterium saphenum ATCC 49989]
 gi|255993843|gb|EEU03932.1| putative pyridoxal-dependent decarboxylase, C- sheet domain protein
           [Eubacterium saphenum ATCC 49989]
          Length = 396

 Score =  119 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 47/378 (12%), Positives = 104/378 (27%), Gaps = 35/378 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           +P Y+  +++  +             V L  ++K      +   +   +      S  E+
Sbjct: 14  SPSYIFSEEEFASRAALVRESFGE-DVNLCFSIKANPF--LLGIMPDQISKVEVCSPGEL 70

Query: 64  MLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            +    K   E   ++   K  E    A+      I   +   ++     A  ++    L
Sbjct: 71  DVCKRLKLPPEMIIFSGVNKSKEEIRVALEYGVRNITAESKKHVDYINSVATDMNITCDL 130

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
            +  S                 L    K++ E +   + GL +    + +        + 
Sbjct: 131 LLRLSDESQ------FGIDGDELLGYIKNRDEYKGFKIAGLHYFTGTQKRRPSAIMKEID 184

Query: 181 NIEKEF----GHFITQIEWISLGGGIHFTDKDYP----VKDFCQRLKEFSEKYSVQIYL- 231
                           IE I  G G+                 + +    ++ S +  L 
Sbjct: 185 KFMAYIDRVEADANFNIERIEYGTGLAVDYFSKDALNEETARIKEIAPKIKELSKKADLT 244

Query: 232 -EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-----------VPD-YLLYQES 278
            E G           T V+D   N      +                  +P+   +    
Sbjct: 245 VEMGRFFSAPCGYYVTEVMDTKVNDGVHYAIVDGGIHQLKYDGQTQGMQIPEITHIKNSQ 304

Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGI 337
           +     +G     +CG  C   D+         +   D + F     Y+++   +     
Sbjct: 305 SCDEVGSGTNKWTLCGSLCTTADVIARSVEFTDLNCKDLLVFHRTGAYSMDEGISLLLSR 364

Query: 338 NMPTIAVKNVDGTIKAIR 355
           +MP+I + +    +  +R
Sbjct: 365 DMPSIYILDKANQLNKVR 382


>gi|242826034|ref|XP_002488560.1| ornithine decarboxylase, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218712378|gb|EED11804.1| ornithine decarboxylase, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 426

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/357 (12%), Positives = 100/357 (28%), Gaps = 34/357 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++       +       +    A+KC     +   L +   G   +S+ E+  
Sbjct: 64  FFVADLGEIRRQHSRWMSHL--PNIMPFFAVKCNPDVELLQVLKELGVGFDCASVEEMQT 121

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                    +  +    K     A        +    +       K      ++ LRI  
Sbjct: 122 VLRLGAPSTSIIFANPCKTPHALAFAHGAGIKMTTFDNLDELDTIKNYMPDARLLLRIFA 181

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
           + S +   L +         +    + +    NV G+ FH          F   + +  +
Sbjct: 182 NDSNALVALGEKFGALPDSIQDLLMRAKDLNLNVVGISFHIGSGASDPSAFQKAIAHSRQ 241

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFC--QRLKEFSEKYSVQIYLEPGEAIVT 239
            +         ++ + +GGG   T+ ++          + E S         EPG     
Sbjct: 242 VWDSARSMGFFLQILDIGGGFQPTEAEFTPMATAIQSAISEASFPGQTIFMAEPGRFFAR 301

Query: 240 NTTTLNTTVLD------------ISENIKNLVIVDSSVEAHVP-----DYLLYQESATIY 282
           +  TL   ++             +    +N  +  + + A +        L+  +     
Sbjct: 302 SVFTLVCRIISCRKSKATESPQRVDMLYQNDGVYGNFMNALIEREDFAPSLIITKGHLPR 361

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA--GYNINRKNWFNGI 337
            +   +   + G +C + D          ++ G            Y       FNG 
Sbjct: 362 KSEY-HAYTIWGPTCDSTDCVSRKASFALLR-GML-----TGKPAYTSATATNFNGF 411


>gi|294011712|ref|YP_003545172.1| ornithine decarboxylase [Sphingobium japonicum UT26S]
 gi|292675042|dbj|BAI96560.1| ornithine decarboxylase [Sphingobium japonicum UT26S]
          Length = 397

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 49/359 (13%), Positives = 100/359 (27%), Gaps = 27/359 (7%)

Query: 26  KNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGET--HAYNVAYK 82
           +    + L A+K   +  +  TL          +S+ EV L  E  G E      +    
Sbjct: 37  EKFPGRSLYAVKANPSPDLIRTLFACGVTHFDVASIAEVRLVAETLGNEAKLCFMHPVKA 96

Query: 83  DCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF 140
           +  I          T   +++ +L K   +A      + L +   VS     L+  ++  
Sbjct: 97  EEAIAEAYHIHGVRTFSLDSMDELAKIM-RATNDATDLELCVRLRVSSEHSELSLASKFG 155

Query: 141 SRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISL 198
           + LGE  ++ + +  +  +  G+ FH   +  S   +S  ++ +          ++ I +
Sbjct: 156 AELGET-RELLMATRQAADALGICFHVGSQAMSPQAYSDAIERVRAAIVDAAVTVDIIDV 214

Query: 199 GGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
           GGG                       +         E        L+     +   ++  
Sbjct: 215 GGGFPSIYPGMEPVALENYFDAIHRGFESLPISYSAELWCEPGRALSAEYSSVVVRVERR 274

Query: 259 VIVDSSVEA-----HVPDYLLYQESATIYPNTGPYT-----AMVCGRSCLAGDIF-GEFH 307
              +  +             +                        G +C   D   G F 
Sbjct: 275 RGTELYINDGAYGALFDAAHIGWRFPVALLREEESEAELTGFSFYGPTCDDMDHMVGPFM 334

Query: 308 FEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD-------GTIKAIREFSY 359
               V+ GD I    +  Y    +  FNG     +     +         +   R  + 
Sbjct: 335 LPDDVQAGDYIEIGMLGAYGAAMRTGFNGFTSEAVVEVEDEPMASLYVDAVPVRRRATV 393


>gi|229057152|ref|ZP_04196542.1| Diaminopimelate decarboxylase [Bacillus cereus AH603]
 gi|228720158|gb|EEL71739.1| Diaminopimelate decarboxylase [Bacillus cereus AH603]
          Length = 199

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 60/190 (31%), Gaps = 17/190 (8%)

Query: 193 IEWISLGGGIHFTDKDYPVK-----------DFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           ++ +++GGG      D                  +      E    +I++EPG +IV + 
Sbjct: 1   MKVLNVGGGFGIRYTDSDTPLTLETYVHAVTSTIREQFTLCEYPLPEIWIEPGRSIVGDA 60

Query: 242 TTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLYQESATIY----PNTGPYTAMVCGR 295
            T   TV  + E       V     +  ++   L       +      +       + G+
Sbjct: 61  GTTLYTVGAVKEIPGIRKYVSVDGGMTDNLRPALYGARYEAMLANRGNDENEELVSIAGK 120

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
            C +GD+         V   D ++      Y  +  N +N I  P +       +   + 
Sbjct: 121 CCESGDMLIWDINLPQVASSDLLAISCTGAYGYSMANNYNRIRRPAVVFAKGGTSQIVVE 180

Query: 356 EFSYNDYYNN 365
             +Y +   N
Sbjct: 181 RETYENIIGN 190


>gi|12018238|ref|NP_072107.1| antizyme inhibitor 1 [Rattus norvegicus]
 gi|13431728|sp|Q63764|AZIN1_RAT RecName: Full=Antizyme inhibitor 1; Short=AZI; AltName:
           Full=Ornithine decarboxylase antizyme inhibitor
 gi|1304190|dbj|BAA09365.1| antizyme inhibitor [Rattus norvegicus]
 gi|2641954|dbj|BAA23594.1| antizyme inhibitor [Rattus norvegicus]
          Length = 448

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 54/371 (14%), Positives = 112/371 (30%), Gaps = 31/371 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  K++        +     +K    +KC +   + + L     G   S+  E+ L
Sbjct: 40  FFVGDLGKIVKKHSQWQNVVAQ--IKPFYMVKCNSTPAVLEILAALGTGFACSTKNEMAL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             E     E   Y    K        +     I    +++   K      + K+ L I  
Sbjct: 98  VQELGVSPENIIYTSPCKQASQIKYAAKVGVNIMTCDNEVELKKIARNHPNAKVLLHIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             +              +      +  +     + G+ FH +   K +  +   L +   
Sbjct: 158 EDNIGGEDGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHISSACKEYQVYVHALSDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
            F   G F   +  + +GGG   T+   ++            F E   +QI  EPG   V
Sbjct: 218 VFDMAGEFGFTMNMLDIGGGFTGTEIQLEEVNHVISPLLDIYFPEGSGIQIISEPGSYYV 277

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE--------------------- 277
           ++  TL   ++       + +              +Y                       
Sbjct: 278 SSAFTLAVNIIAKKVVENDKLSSGVEKNGSDEPAFVYYMNDGVYGSFASKLSEDLNTVPE 337

Query: 278 -SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                  +   +T+ + G SC   D   E      + +GD + F+++   +++  + F+ 
Sbjct: 338 VHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELSVGDWLIFDNMGADSLHGPSAFSD 397

Query: 337 INMPTIAVKNV 347
              P I     
Sbjct: 398 TQRPAIYFMMS 408


>gi|238060809|ref|ZP_04605518.1| orn/DAP/Arg decarboxylase 2 [Micromonospora sp. ATCC 39149]
 gi|237882620|gb|EEP71448.1| orn/DAP/Arg decarboxylase 2 [Micromonospora sp. ATCC 39149]
          Length = 422

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 53/381 (13%), Positives = 92/381 (24%), Gaps = 36/381 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +P Y+ D  ++                 LL ++K      +   L         SS  E
Sbjct: 14  GSPLYVYDLDRIDQAHADLRAALPTP-STLLYSMKANPHPVIARRLRLAGCRLEVSSAGE 72

Query: 63  VMLGHEKFGGETH--AYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKK-I 118
           +        G         A    E++  ++         + S+L +    A        
Sbjct: 73  LAAALLAGAGGGDLLYTGPAKTPAELEEAVAAGVRAFSVESFSELQRLGRAAAGQDADLT 132

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-------NVNGLMFHNNCENKS 171
            L        +           S+ G                    V GL        + 
Sbjct: 133 ALLRVNGPGAAGGSGLRMTGTASQFGIDAGTLATEWSPDRVPDRVRVTGLHLFPITNARG 192

Query: 172 FLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
                  L+                   + LGGG          +   QRL+  +E    
Sbjct: 193 EDQLLDELRAAVDTAAELARVCRLDPAVVDLGGGFSAPYAAPGSRPVYQRLRAEAETRLD 252

Query: 228 QIYL-----------EPGEAIVTNTTTLNTTVLDISENIKNLV-------IVDSSVEAHV 269
             +            E G  +V    TL TTV+D+                V   +    
Sbjct: 253 AAFPGWRAGRPEVMFESGRYLVAECGTLLTTVVDVKHTRGRTYAVLDAGINVLGGMTGLG 312

Query: 270 PDYLLYQESATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
               +              T   + G SC   D+ G        + G  ++  +V  Y +
Sbjct: 313 RLLPMRALPVGSAETASDVTRVDLAGPSCTPLDVLGRDVPLPEARSGTVLAIPNVGAYGL 372

Query: 329 NRK-NWFNGINMPTIAVKNVD 348
           +     F    MP   + +  
Sbjct: 373 SASLVGFLSRPMPAEVLLSGG 393


>gi|165918435|ref|ZP_02218521.1| putative decarboxylase, pyridoxal-dependent [Coxiella burnetii RSA
           334]
 gi|165917803|gb|EDR36407.1| putative decarboxylase, pyridoxal-dependent [Coxiella burnetii RSA
           334]
          Length = 396

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 52/350 (14%), Positives = 107/350 (30%), Gaps = 22/350 (6%)

Query: 19  DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAY 77
               Y     G ++L A+K      +   ++ +       +S  E+ +  E   G    +
Sbjct: 28  RAVNYFCTQFGGRVLYAVKTNPEKHVIQAVHAHGVTAFDVASYEEIRIIKEYAPGAELYF 87

Query: 78  NVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADP 136
                    I           F+        K      + K           + F   + 
Sbjct: 88  MHPVKSPHAIREAYFEYAVRHFSLDCLEELHKILRHTENAKDLCLHLRLAIPNTFAEFNL 147

Query: 137 NRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIE 194
              F     +  + ++   K     G+ FH   +      +   ++  +K       +IE
Sbjct: 148 AEKFGINLHEAPELLKQLRKAAYQLGVTFHVGSQCMHPDAYRIAIRMADKVINEAQVEIE 207

Query: 195 WISLGGGIHFTDK--------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNT 246
             ++GGG               Y      +  K       +Q+  EPG ++V  +T++  
Sbjct: 208 SFNVGGGFPSIYPGMIPPALTIYFEAIHDEFAKVAQRHPGIQLLCEPGRSLVAESTSVIV 267

Query: 247 TVLDISENIKNLVI------VDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
            V    ++I  +         D+ +   +    L +   T   +  P++    G +C + 
Sbjct: 268 NVELRKDDILYINDGTYGSLFDAGIPHFIFPVHLLRPKHTADVDLLPFSFY--GPTCDSL 325

Query: 301 DIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN-MPTIAVKNVD 348
           D   G F+    +K GD I    +  Y       FNG      + + + +
Sbjct: 326 DYMKGPFYLPNDIKAGDYIEIGQMGAYGRTLSTAFNGFKQREGVIMVSDE 375


>gi|254475844|ref|ZP_05089230.1| diaminopimelate/ornithine decarboxylase [Ruegeria sp. R11]
 gi|214030087|gb|EEB70922.1| diaminopimelate/ornithine decarboxylase [Ruegeria sp. R11]
          Length = 405

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 44/361 (12%), Positives = 102/361 (28%), Gaps = 29/361 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGTTSSSLYEV 63
           P      + L    +            +  A+K      +  + +   +     +S  E+
Sbjct: 45  PILYFSPRVLHEVANRFQTGFPG---LVTYAVKANPHPAVLSNLVAAGITAFDVASPAEM 101

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                        YN   +     A   +   +   +V   ++    A        + + 
Sbjct: 102 DAVRAASPDAVMHYNNPVRSDAEIAAGIDHG-VASWSVDDASELAKLADVPKSCE-IAVR 159

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNG-----LMFHNNCENKSFLCFSAM 178
            ++  +           S+ G   ++ +        G     L FH   + +    +   
Sbjct: 160 FALPVAGAAYDF----GSKFGASPEEAVALLKAVTEGGWTPALCFHPGTQCEDESAWVEY 215

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYP------VKDFCQRLKEFSEKYSVQIYLE 232
           +   +        +I  +++GGG                +   +            +  E
Sbjct: 216 IYAAKDIIAAAGVEIARLNVGGGFAANRDGVAPDLERVFEAIARAADAAFGDDKPLLICE 275

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH--VPDYLLYQESATI-----YPNT 285
           PG A+V+ + TL   +  + +  + + + D        + D  L      +         
Sbjct: 276 PGRAMVSESFTLAARIKGMRKAGEVVFLNDGIYGGLVDIRDMGLPGRVEVVAANGTRRQG 335

Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344
                +V G +C + D   +        +IGD + F  +  Y+      FNG  +  +A 
Sbjct: 336 DRRPRVVFGPTCDSLDRLPDGLPLPEETRIGDYVLFPGLGAYSSAMSTQFNGYGLSDVAT 395

Query: 345 K 345
            
Sbjct: 396 V 396


>gi|328469042|gb|EGF39997.1| diaminopimelate decarboxylase [Lactobacillus rhamnosus MTCC 5462]
          Length = 159

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 42/136 (30%), Gaps = 6/136 (4%)

Query: 235 EAIVTNTTTLNTTVLDISENI--KNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPY 288
            +IV        TV    +    +  V VD  +  ++   L   +     A         
Sbjct: 1   RSIVGPAGYSLYTVGSRKDVPGLRPYVAVDGGMGDNIRPALYQAQYTAVVADHPTAKPTE 60

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348
              + G+ C +GDI  +       + GD ++  D   Y  +  + +N    P I      
Sbjct: 61  HVHLVGKYCESGDILIDDAPLPATQPGDVVAVFDTGAYGYSMASNYNRNPRPAIVFVEDG 120

Query: 349 GTIKAIREFSYNDYYN 364
                +   SY D   
Sbjct: 121 QAQLVVTRESYADLIQ 136


>gi|161830669|ref|YP_001596639.1| putative decarboxylase, pyridoxal-dependent [Coxiella burnetii RSA
           331]
 gi|161762536|gb|ABX78178.1| putative decarboxylase, pyridoxal-dependent [Coxiella burnetii RSA
           331]
          Length = 396

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 51/350 (14%), Positives = 106/350 (30%), Gaps = 22/350 (6%)

Query: 19  DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAY 77
               Y       ++L A+K      +   ++ +       +S  E+ +  E   G    +
Sbjct: 28  RAVNYFCTQFDGRVLYAVKTNPEKHVIQAVHAHGVTAFDVASYEEIRIIKEYAPGAELYF 87

Query: 78  NVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADP 136
                    I           F+        K      + K           + F   + 
Sbjct: 88  MHPVKSPHAIREAYFEYGVRHFSLDCLEELHKILRHTENAKDLCLHLRLAIPNTFAEFNL 147

Query: 137 NRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIE 194
              F     +  + ++   K     G+ FH   +      +   ++  +K       +IE
Sbjct: 148 AEKFGINLHEAPELLKQLRKAAYQLGVTFHVGSQCMHPDAYRIAIRMADKVINEAQVEIE 207

Query: 195 WISLGGGIHFTDK--------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNT 246
             ++GGG               Y      +  K       +Q+  EPG ++V  +T++  
Sbjct: 208 SFNVGGGFPSIYPGMIPPALTIYFEAIHDEFAKVAQRHPGIQLLCEPGRSLVAESTSVIV 267

Query: 247 TVLDISENIKNLVI------VDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
            V    ++I  +         D+ +   +    L +   T   +  P++    G +C + 
Sbjct: 268 NVELRKDDILYINDGTYGSLFDAGIPHFIFPVHLLRPKHTADVDLLPFSFY--GPTCDSL 325

Query: 301 DIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN-MPTIAVKNVD 348
           D   G F+    +K GD I    +  Y       FNG      + + + +
Sbjct: 326 DYMKGPFYLPNDIKAGDYIEIGQMGAYGRTLSTAFNGFKQREGVIMVSDE 375


>gi|153207379|ref|ZP_01946116.1| putative decarboxylase, pyridoxal-dependent [Coxiella burnetii 'MSU
           Goat Q177']
 gi|120576688|gb|EAX33312.1| putative decarboxylase, pyridoxal-dependent [Coxiella burnetii 'MSU
           Goat Q177']
          Length = 396

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 52/350 (14%), Positives = 107/350 (30%), Gaps = 22/350 (6%)

Query: 19  DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAY 77
               Y     G ++L A+K      +   ++ +       +S  E+ +  E   G    +
Sbjct: 28  RAVNYFCTQFGGRVLYAVKTNPEKHVIQAVHAHGVTAFDVASYEEIRIIKESAPGAELYF 87

Query: 78  NVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADP 136
                    I           F+        K      + K           + F   + 
Sbjct: 88  MHPVKSPHAIREAYFEYAVRHFSLDCLEELHKILRHTENAKDLCLHLRLAIPNTFAEFNL 147

Query: 137 NRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIE 194
              F     +  + ++   K     G+ FH   +      +   ++  +K       +IE
Sbjct: 148 AEKFGINLHEAPELLKQLRKAAYQLGVTFHVGSQCMHPDAYRIAIRMADKVINEAQVEIE 207

Query: 195 WISLGGGIHFTDK--------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNT 246
             ++GGG               Y      +  K       +Q+  EPG ++V  +T++  
Sbjct: 208 SFNVGGGFPSIYPGMIPPALTIYFEAIHDEFAKVAQRHPGIQLLCEPGRSLVAESTSVIV 267

Query: 247 TVLDISENIKNLVI------VDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
            V    ++I  +         D+ +   +    L +   T   +  P++    G +C + 
Sbjct: 268 NVELRKDDILYINDGTYGSLFDAGIPHFIFPVHLLRPKHTADVDLLPFSFY--GPTCDSL 325

Query: 301 DIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN-MPTIAVKNVD 348
           D   G F+    +K GD I    +  Y       FNG      + + + +
Sbjct: 326 DYMKGPFYLPNDIKAGDYIEIGQMGAYGRTLSTAFNGFKQREGVIMVSDE 375


>gi|326494872|dbj|BAJ94555.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 503

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 58/377 (15%), Positives = 112/377 (29%), Gaps = 42/377 (11%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   +  ++           V++  A KC     +   L+        +S  E   
Sbjct: 105 FFVADLSAVYESVKMWRESAIGDRVEIFYAAKCCPTLPVLHLLSLLGVNFDCASTAEFQQ 164

Query: 66  GH---EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
                     E   +    K   +   A  ++ D + F+   +L K K         + +
Sbjct: 165 VLSLPSAPSPERIIFANPCKAPSMIRAAADAHVDMMTFDNADELYKVKKAHPNAKLVLRI 224

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
             + S S  +  L       +  G       +    NV G+ FH     K    FS  + 
Sbjct: 225 LTDDSKSLCRLGLKYGAPLETCPGLLAL--AQQLGLNVIGVSFHVGSGCKDPAQFSDAIW 282

Query: 181 NIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS-EKYSVQIYLEPGEA 236
              K F          +++ +GGG                L  +   +  V++  EPG  
Sbjct: 283 RSRKVFDMGKKVGYDFKFLDIGGGFERPTFAEMSDVVRDALDVYFPRESGVRVIAEPGRL 342

Query: 237 IVTNTTTLNTT-----------------------VLDISENIKNLVIVDSSVEAHVPDYL 273
           +V++  TL T                        V+    +           +   PD  
Sbjct: 343 LVSSAFTLATNIIARRRALEPASVAAQEEGEGADVMYYINDGVYGSFNCILFDHVTPDTH 402

Query: 274 LYQESATI-------YPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAG 325
           L                 T    A + G +C + D           +++GD + + ++  
Sbjct: 403 LLTHQHQYVGATRQALEGTNTEMASIWGPTCDSMDCVRSLVRLPAGLQVGDWLGWSNMGA 462

Query: 326 YNINRKNWFNGINMPTI 342
           Y +   + FNG+N   +
Sbjct: 463 YTLCAASRFNGMNKSPV 479


>gi|296283679|ref|ZP_06861677.1| Orn/DAP/Arg decarboxylase 2 [Citromicrobium bathyomarinum JL354]
          Length = 400

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 47/350 (13%), Positives = 87/350 (24%), Gaps = 25/350 (7%)

Query: 31  KLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEID-- 87
           + L A+K   +  +   L          +S+ EV L           +    K       
Sbjct: 42  RALYAVKANPSPDLIRILWDNGITHYDVASIAEVRLVRGLLPDAELCFMHPVKPRSAIAE 101

Query: 88  -AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI------GLRINPSVSYSKFILADPNRPF 140
                 C T   ++  +L K  D  +             +R+  S  +S+  LA      
Sbjct: 102 AYHQHGCRTFSLDSEEELAKIVDACRAPDGSPAKDLKLLVRLRVSSEFSELSLASKFGTD 161

Query: 141 SRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGG 200
                    +       + G+ FH   +  +   +   L+            I+ I +GG
Sbjct: 162 LIDAPVLLQQTRQHCDWL-GVCFHVGSQAMTPFAYVQALERARAAIASSSVVIDIIDVGG 220

Query: 201 GIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI 260
           G                                 E        L      +   ++    
Sbjct: 221 GFPSIYPGMEPPPLEDYFDVIFRASESLPISYSAELWCEPGRALCAEYSSLLAKVEKRRG 280

Query: 261 VDSSVEAHVPDYLLYQESATIYP---------NTGPYTAMVCGRSCLAGDIF-GEFHFEK 310
            +  +       L                   +       + G +C   D   G F    
Sbjct: 281 TELYINDGAYGALYDAAHLGWKFPVRALGHDEHAASEDFSLYGPTCDDADYMEGPFALPA 340

Query: 311 PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI---REF 357
            +K GD +    +  Y    K  FNG     +A+   D  ++ +   R  
Sbjct: 341 DIKAGDYVEIGMLGAYGAAMKTDFNGFG-ANMAIVVGDDPMQTLYDGRRE 389


>gi|27370330|ref|NP_766463.1| antizyme inhibitor 2 [Mus musculus]
 gi|68564988|sp|Q8BVM4|ADC_MOUSE RecName: Full=Antizyme inhibitor 2; Short=AZI2; AltName:
           Full=Arginine decarboxylase-like protein; Short=ADC;
           Short=ARGDC
 gi|26346056|dbj|BAC36679.1| unnamed protein product [Mus musculus]
 gi|123248043|emb|CAM19110.1| arginine decarboxylase [Mus musculus]
 gi|148698276|gb|EDL30223.1| arginine decarboxylase [Mus musculus]
 gi|187951285|gb|AAI38974.1| Arginine decarboxylase [Mus musculus]
 gi|223460424|gb|AAI38975.1| Arginine decarboxylase [Mus musculus]
          Length = 459

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 51/352 (14%), Positives = 114/352 (32%), Gaps = 32/352 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++       +++    V+   A+ C ++ G+   L +   G + ++  E+ L
Sbjct: 41  FFVADLGAVVR--KHFCFLKHLPRVRPFYAVGCNSSLGVLKVLAELGLGFSCANKAEMEL 98

Query: 66  G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             H              K        +     + +  +++   K        K+ L I  
Sbjct: 99  VQHIGVPASKIICANPCKQVAQIKYAAKHGVRLLSFDNEVELAKVVKSHPSAKMVLCIAT 158

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S+S   L+       +      +  +     V G+ FH          ++  + +   
Sbjct: 159 QDSHSLNHLSLRFGASLKSCRHLLENAKKSHVEVVGVSFHIGSGCPDPQAYAQSIADARL 218

Query: 185 EF---GHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
            F         +  + LGGG    +      ++            F E   V I  E G 
Sbjct: 219 VFQMGEELGHTMNILDLGGGFPGLEGAKVRFEEMASVINSALDLYFPEGCGVDILAELGR 278

Query: 236 AIVTNTTTL------NTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT 289
             VT+  T+         VLD +   +       S+  ++ + +    ++ ++ NT P  
Sbjct: 279 YYVTSAFTVAVSIVAKREVLDQASREEQTGAAPKSIVYYLDEGVYGVFNSVLFDNTCPTP 338

Query: 290 A--------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
           A               + G +    D   E  +   +++GD + F+++  Y 
Sbjct: 339 ALQKKPSADQPLYSSSLWGPAVEGCDCVAEGLWLPQLQVGDWLVFDNMGAYT 390


>gi|209363877|ref|YP_001424127.2| ornithine decarboxylase [Coxiella burnetii Dugway 5J108-111]
 gi|207081810|gb|ABS77454.2| ornithine decarboxylase [Coxiella burnetii Dugway 5J108-111]
          Length = 400

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 52/350 (14%), Positives = 107/350 (30%), Gaps = 22/350 (6%)

Query: 19  DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAY 77
               Y     G ++L A+K      +   ++ +       +S  E+ +  E   G    +
Sbjct: 32  RAVNYFCTQFGGRVLYAVKTNPEKHVIQAVHAHGVTAFDVASYEEIRIIKEYAPGAELYF 91

Query: 78  NVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADP 136
                    I           F+        K      + K           + F   + 
Sbjct: 92  MHPVKSPHAIREAYFEYAVRHFSLDCLEELHKILRHTENAKDLCLHLRLAIPNTFAEFNL 151

Query: 137 NRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIE 194
              F     +  + ++   K     G+ FH   +      +   ++  +K       +IE
Sbjct: 152 AEKFGINLHEAPELLKQLRKAAYQLGVTFHVGSQCMHPDAYRIAIRMADKVINEAQVEIE 211

Query: 195 WISLGGGIHFTDK--------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNT 246
             ++GGG               Y      +  K       +Q+  EPG ++V  +T++  
Sbjct: 212 SFNVGGGFPSIYPGMIPPALTIYFEAIHDEFAKVAQRHPGIQLLCEPGRSLVAESTSVIV 271

Query: 247 TVLDISENIKNLVI------VDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
            V    ++I  +         D+ +   +    L +   T   +  P++    G +C + 
Sbjct: 272 NVELRKDDILYINDGTYGSLFDAGIPHFIFPVHLLRPKHTADVDLLPFSFY--GPTCDSL 329

Query: 301 DIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN-MPTIAVKNVD 348
           D   G F+    +K GD I    +  Y       FNG      + + + +
Sbjct: 330 DYMKGPFYLPNDIKAGDYIEIGQMGAYGRTLSTAFNGFKQREGVIMVSDE 379


>gi|311900080|dbj|BAJ32488.1| putative decarboxylase [Kitasatospora setae KM-6054]
          Length = 399

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 51/372 (13%), Positives = 113/372 (30%), Gaps = 40/372 (10%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE 68
            D   +     T     +  GV +  A+K      +   L     G  ++S  E++    
Sbjct: 28  YDLAGIARRYRTLRD--ELPGVAVRFAMKACPVDEVLAELAALGAGFDAASPNEIVQALR 85

Query: 69  -KFGGET-HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRINPS 125
                E  H  N    D  I             ++++ +    + A        L  +  
Sbjct: 86  TGTPPERVHYGNTVKSDRGIAEAHRLGIRDFATDSLADVAAIAEHAPGARVFCRLATSGE 145

Query: 126 VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF---SAMLKNI 182
            +             +    +             GL  H   +  +   +     +L + 
Sbjct: 146 GALWGLSRKY--GCSAADAVRVMAAARDAGLAPGGLSVHVGSQQLTAEAWAAAFDLLADA 203

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDY--------PVKDFCQRLKEFSEKYSV------Q 228
             E      +++ ++LGGG+               P+ D  + +++  ++         +
Sbjct: 204 MVELERDGIRLDHVNLGGGLPALGYADRYGTALAPPLDDIFRTVRQGLDRLRRLHGGDLR 263

Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIK------NLVIVDSSVEAHVPDYLLYQES--AT 280
             LEPG  +V +   + T V  +++  +      + + +       + +    Q      
Sbjct: 264 FVLEPGRHLVADQGAIRTHVYRLTDRQQPDGEREHWLYLGCGKFNGLYEMDQVQYRLVFP 323

Query: 281 IYPNTGPYTAMVCGRSCLAGDIF------GEFHFEKPVKIGDRISFEDVAGYNINRKNW- 333
            +P+     A++ G +C + D F      G     + V  GD +       Y ++     
Sbjct: 324 THPDEDRVPAVIAGPTCDSDDTFPHGGATGRVPVPRAVASGDPVWILSSGAYAVSYLTQG 383

Query: 334 FNGI-NMPTIAV 344
           FNG   +P   +
Sbjct: 384 FNGFDPLPYTVL 395


>gi|212219056|ref|YP_002305843.1| ornithine decarboxylase [Coxiella burnetii CbuK_Q154]
 gi|212013318|gb|ACJ20698.1| ornithine decarboxylase [Coxiella burnetii CbuK_Q154]
          Length = 400

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 52/350 (14%), Positives = 107/350 (30%), Gaps = 22/350 (6%)

Query: 19  DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAY 77
               Y     G ++L A+K      +   ++ +       +S  E+ +  E   G    +
Sbjct: 32  RAVNYFCTQFGGRVLYAVKTNPEKHVIQAVHAHGVTAFDVASYEEIRIIKESAPGAELYF 91

Query: 78  NVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADP 136
                    I           F+        K      + K           + F   + 
Sbjct: 92  MHPVKSPHAIREAYFEYAVRHFSLDCLEELHKILRHTENAKDLCLHLRLAIPNTFAEFNL 151

Query: 137 NRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIE 194
              F     +  + ++   K     G+ FH   +      +   ++  +K       +IE
Sbjct: 152 AEKFGINLHEAPELLKQLRKAAYQLGVTFHVGSQCMHPDAYRIAIRMADKVINEAQVEIE 211

Query: 195 WISLGGGIHFTDK--------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNT 246
             ++GGG               Y      +  K       +Q+  EPG ++V  +T++  
Sbjct: 212 SFNVGGGFPSIYPGMIPPALTIYFEAIHDEFAKVAQRHPGIQLLCEPGRSLVAESTSVIV 271

Query: 247 TVLDISENIKNLVI------VDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
            V    ++I  +         D+ +   +    L +   T   +  P++    G +C + 
Sbjct: 272 NVELRKDDILYINDGTYGSLFDAGIPHFIFPVHLLRPKHTADVDLLPFSFY--GPTCDSL 329

Query: 301 DIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN-MPTIAVKNVD 348
           D   G F+    +K GD I    +  Y       FNG      + + + +
Sbjct: 330 DYMKGPFYLPNDIKAGDYIEIGQMGAYGRTLSTAFNGFKQREGVIMVSDE 379


>gi|215919028|ref|NP_819750.2| putative decarboxylase, pyridoxal-dependent [Coxiella burnetii RSA
           493]
 gi|206583913|gb|AAO90264.2| ornithine decarboxylase [Coxiella burnetii RSA 493]
          Length = 400

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 51/350 (14%), Positives = 106/350 (30%), Gaps = 22/350 (6%)

Query: 19  DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAY 77
               Y       ++L A+K      +   ++ +       +S  E+ +  E   G    +
Sbjct: 32  RAVNYFCTQFDGRVLYAVKTNPEKHVIQAVHAHGVTAFDVASYEEIRIIKEYAPGAELYF 91

Query: 78  NVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADP 136
                    I           F+        K      + K           + F   + 
Sbjct: 92  MHPVKSPHAIREAYFEYGVRHFSLDCLEELHKILRHTENAKDLCLHLRLAIPNTFAEFNL 151

Query: 137 NRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIE 194
              F     +  + ++   K     G+ FH   +      +   ++  +K       +IE
Sbjct: 152 AEKFGINLHEAPELLKQLRKAAYQLGVTFHVGSQCMHPDAYRIAIRMADKVINEAQVEIE 211

Query: 195 WISLGGGIHFTDK--------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNT 246
             ++GGG               Y      +  K       +Q+  EPG ++V  +T++  
Sbjct: 212 SFNVGGGFPSIYPGMIPPALTIYFEAIHDEFAKVAQRHPGIQLLCEPGRSLVAESTSVIV 271

Query: 247 TVLDISENIKNLVI------VDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
            V    ++I  +         D+ +   +    L +   T   +  P++    G +C + 
Sbjct: 272 NVELRKDDILYINDGTYGSLFDAGIPHFIFPVHLLRPKHTADVDLLPFSFY--GPTCDSL 329

Query: 301 DIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN-MPTIAVKNVD 348
           D   G F+    +K GD I    +  Y       FNG      + + + +
Sbjct: 330 DYMKGPFYLPNDIKAGDYIEIGQMGAYGRTLSTAFNGFKQREGVIMVSDE 379


>gi|94497588|ref|ZP_01304157.1| diaminopimelate/ornithine decarboxylase [Sphingomonas sp. SKA58]
 gi|94423005|gb|EAT08037.1| diaminopimelate/ornithine decarboxylase [Sphingomonas sp. SKA58]
          Length = 402

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 49/325 (15%), Positives = 95/325 (29%), Gaps = 22/325 (6%)

Query: 33  LLALKCFAAWGMFDTL-NQYMDGTTSSSLYEVML---GHEKFGGETHAYNV---AYKDCE 85
           L A+K   +  +  TL    +     +S+ EV L         G    +     A +   
Sbjct: 44  LYAVKANPSPDLIRTLFASGITHFDVASIAEVRLVAEALAGQDGAKLCFMHPVKAEEAIA 103

Query: 86  IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGE 145
               +    T   +T+ +L+K   +A      + L +   VS     L+  ++  + LGE
Sbjct: 104 EAYHVHGVRTFSLDTIDELDKIM-RATGHATDLELCVRLRVSSEHAELSLASKFGAELGE 162

Query: 146 KCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIH 203
             ++ + +  +  +  G+ FH   +  S   +S  ++ +          ++ I +GGG  
Sbjct: 163 T-RELLMATRQAADALGICFHVGSQAMSPQAYSDAIERVRAAIVDAAVTVDIIDVGGGFP 221

Query: 204 FTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDS 263
                       +        +         E        L+     +   ++     + 
Sbjct: 222 SVYPGMEPVSLERYFDAIHRGFESLPISYSAELWCEPGRALSAEYSSVVVRVERRRGNEL 281

Query: 264 SVEAHVPDYLLYQESATIYPN----------TGPYTAMVCGRSCLAGDIF-GEFHFEKPV 312
            +       L                              G +C   D   G F     V
Sbjct: 282 YINDGAYGALFDAAHIGWRFPVELLREEASLESLEGFSFYGPTCDDMDHMVGPFMLPSDV 341

Query: 313 KIGDRISFEDVAGYNINRKNWFNGI 337
           K GD I    +  Y    +  FNG 
Sbjct: 342 KAGDYIEIGMLGAYGAAMRTGFNGF 366


>gi|224535493|ref|ZP_03676032.1| hypothetical protein BACCELL_00356 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522886|gb|EEF91991.1| hypothetical protein BACCELL_00356 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 285

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 50/272 (18%), Positives = 92/272 (33%), Gaps = 22/272 (8%)

Query: 91  SNCDTIIFNTVSQLNKFKDKAQKLHKKIGL--RINPSVSYSKFILADPNRPFSRLGEKCK 148
            N       ++ +L    + A    K   +  RINP+V              ++ G   +
Sbjct: 5   YNIFCFNVESIPELEVINELAAAKGKIANISFRINPNVGAHTHANITTGLAENKFGISMQ 64

Query: 149 D-------KIESEIKNVNGLMFHNNCEN---KSFLCFSAMLKNIEKEFGHFITQIEWISL 198
           D        +E +     GL FH   +      F+     +  ++ +      +IE I++
Sbjct: 65  DMGHVIEVALEMKNVKFIGLHFHIGSQILDMGDFVALCNRVNELQDKLEAHRIRIEHINV 124

Query: 199 GGGIHFTDKDYPVK-------DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251
           GGG+    K    +        F    +    +    ++ E G AI     +L + VL +
Sbjct: 125 GGGLGIDYKHPNRQAIPDFKDYFSTYAEHLKLRSYQTLHFELGRAITGQCGSLISQVLYV 184

Query: 252 SENIKNLVIV-DSSVEAHVPDYLL--YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHF 308
            +       + D+ +   +   L   Y +   I          V G  C + D+FG+   
Sbjct: 185 KQGANKKFAILDAGMTDLIRPALYQAYHKIENITSEDAVEAYDVVGPICESSDVFGKAID 244

Query: 309 EKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              VK GD I+      Y     + +N   +P
Sbjct: 245 LNKVKRGDLIALRSAGAYGEIMASSYNCRELP 276


>gi|326933119|ref|XP_003212656.1| PREDICTED: arginine decarboxylase-like [Meleagris gallopavo]
          Length = 460

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 55/370 (14%), Positives = 112/370 (30%), Gaps = 38/370 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++       +++    VK    ++C ++ G+   L +   G   ++  E+  
Sbjct: 41  FFVADLGDIVK--KHLRFLKALPRVKPYFPVRCNSSGGVMRLLAELGAGFACANKTEIAE 98

Query: 66  GHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                   +   Y+   K       A       + F+   +L K      +    +G+  
Sbjct: 99  VQSIGVPADKIFYSSPCKQVAHIKYAASHGVQLMTFDNEVELGKVARSHPQARMLLGIAA 158

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           +PS S    ++        R   +  +  + +   V G+ FH    +     F+  +   
Sbjct: 159 DPSPSAHPSMMFGATLKSCR---RLLESAKEQDVEVVGISFHLGSHSLEPQVFAQAVAEA 215

Query: 183 EKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRL------KEFSEKYSVQIYLEP 233
           +  F        ++  + +GGG   T+      +    +        F E   V+I   P
Sbjct: 216 QLAFDMGTELGYRMHLLDIGGGFPGTEDTRAQFEEIAAVINSALDMYFPEGCGVEIVATP 275

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-------HVPD--------YLLYQES 278
           G   VT+  T   ++    E        D            H+ D         L     
Sbjct: 276 GRYYVTSAFTFAASITGKEEVPMEQPGSDGEESGSKRSLVYHLSDGIYGTFSCVLFDSPC 335

Query: 279 ATIYPNTGPYTAM------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                +  P          + G    A D          ++ GD + F D+  Y I   +
Sbjct: 336 PKPLLHKKPCPEHPLCSSSLRGPLGHAEDQITNDVELPELQDGDWLIFRDMGAYTIATSS 395

Query: 333 WFNGINMPTI 342
              G   P +
Sbjct: 396 LCGGCPRPHV 405


>gi|167760022|ref|ZP_02432149.1| hypothetical protein CLOSCI_02394 [Clostridium scindens ATCC 35704]
 gi|167662315|gb|EDS06445.1| hypothetical protein CLOSCI_02394 [Clostridium scindens ATCC 35704]
          Length = 416

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 59/405 (14%), Positives = 119/405 (29%), Gaps = 54/405 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP Y+    +L   +     I       L  A+K      +   L   +D     S  E
Sbjct: 14  ETPSYVFHIDELKKRIAMIREILGG-KASLCYAMKANPF--LVKPLKDVVDKYEVCSPGE 70

Query: 63  VMLGHEK-FGGETHAYNVAYKDCEIDAVLSNC----DTIIFNTVSQLNKFKDKAQKLHKK 117
             +        E    +  YK+ +  A +        T    + S L   +  A K   +
Sbjct: 71  FGICETCQIPMERIVLSGVYKEEKDIAHVMCNYRDKGTYTIESASHLELLEQCACKEGIR 130

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
           I   I                  + +    + + E    N+ GL  ++  + K       
Sbjct: 131 IRALIRV------TSGNQFGMDEAEICRIIERRNEYSHVNIIGLQHYSGTQKKKLAKIKK 184

Query: 178 MLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE------KYSV 227
            L+++++        +  + E +  G G +        +   + + +         ++  
Sbjct: 185 ELEHLDELITMLKESYGYEAEELEYGPGFYVPYFSTDEEADDEAMLKEFAGFLSELRFQG 244

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP---DYLLYQESATIYPN 284
           +I LE G  +        T ++D  EN+     +      H+      +  +       +
Sbjct: 245 KITLEMGRYLAAYCGCYLTAIVDQKENMGQKYCIVDGGIHHLTYFGQAMAMKRPHYRQYH 304

Query: 285 TGP-------------------------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319
                                           VCG  C   D+  +    +  KIGD + 
Sbjct: 305 EEEGRYEEVSVDKEQKGIKQEDFSQKDVTEWNVCGSLCTVNDVIVKNLPLQQAKIGDILV 364

Query: 320 FEDVAGYNINRKN-WFNGINMPTIAVKNVDGTIKA-IREFSYNDY 362
           FE    Y++      F   ++P +   +    IK   R  S ++ 
Sbjct: 365 FERTGAYSVTEGMYLFLSRDLPQVLFYSKSEGIKVARRRRSTDEI 409


>gi|166030547|ref|ZP_02233376.1| hypothetical protein DORFOR_00208 [Dorea formicigenerans ATCC
           27755]
 gi|166029709|gb|EDR48466.1| hypothetical protein DORFOR_00208 [Dorea formicigenerans ATCC
           27755]
          Length = 408

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 62/395 (15%), Positives = 113/395 (28%), Gaps = 47/395 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP Y+ D   L + +     I      ++  A+K      +   L    D     S  E
Sbjct: 14  ETPAYIFDLDMLKSRVRMMKTILGER-AEICFAMKANPF--LIGPLKDTADKFEVCSPGE 70

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNC----DTIIFNTVSQLNKFKDKAQKLHKK 117
             +        E    +   K+        +           +   L   +  A++ +  
Sbjct: 71  FHICETVGIPMERIVLSGVNKEKCDITHAMHTYGNAGVYTIESRKHLELLEMCAKEENIT 130

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
           I   I                    + +    K       + G+  ++  + K F     
Sbjct: 131 IHALIRV------TSGNQFGIDEEEVFDIVSKKDYYPHVRIEGIQCYSGTQKKKFSKIEK 184

Query: 178 MLKNIEKEF----GHFITQIEWISLGGGIHFTD-KDYPVKDFCQRLKEFSE-----KYSV 227
            L  ++              E +  G G +    ++    D    L++F++     K+  
Sbjct: 185 ELHWLDDILTRLKETCDYDAEVLEYGPGFYIPYFENEDEVDDESLLQQFADTLATLKFQG 244

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP---DYLLYQESATIYPN 284
           +I LE G  I        T ++D   N      +      H+      +  +     +  
Sbjct: 245 KITLEMGRYIAAYCGYYVTRIVDQKINHGQNYCIVDGGLNHLNYYGQAMAMKMPHHKHIP 304

Query: 285 TGPYT-----------------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
             P                     +CG  C   D+  +    K  KIGD + FE V  Y+
Sbjct: 305 DAPSEASDEQSEEQSEEQSEVLWNICGSLCTVNDVLVKQMPLKHAKIGDALVFERVGAYS 364

Query: 328 INRK-NWFNGINMPTIAVK-NVDGTIKAIR-EFSY 359
           +      F    MP I      DG  +A +   SY
Sbjct: 365 VTEGIYLFLSRRMPRILFWSEKDGFTEARKATESY 399


>gi|302557780|ref|ZP_07310122.1| LOW QUALITY PROTEIN: lysine/ornithine decarboxylase [Streptomyces
           griseoflavus Tu4000]
 gi|302475398|gb|EFL38491.1| LOW QUALITY PROTEIN: lysine/ornithine decarboxylase [Streptomyces
           griseoflavus Tu4000]
          Length = 383

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 46/370 (12%), Positives = 98/370 (26%), Gaps = 41/370 (11%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67
           + D   +    D      +  GV +  A+K      +   L     G  ++S  E+ L  
Sbjct: 18  VYDLDGIAAQYDAL--AGELPGVGIRFAVKACPVPEVLARLAGRGAGFDAASPREIALAL 75

Query: 68  E-KFGGETHAY-NVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                     Y N    D +I             ++V  +    + A        L  + 
Sbjct: 76  ATGVPAGRIHYGNTVKSDRDIAEACRLGVRDFATDSVEDVAALGEHAPGARVFCRLATSG 135

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             +                  +  +         +GL  H   +  +   +      + +
Sbjct: 136 EGALWGLSRKFGCSADDA--VRVLEAARDAGLVPSGLSVHVGSQQMTAEAWQRAFTALAE 193

Query: 185 EFGH---FITQIEWISLGGGIH--------FTDKDYPVKDFCQRLKEFSEK------YSV 227
                       + ++LGGG+             D P+      L+E  E+         
Sbjct: 194 VLTALHGRGIVPDHVNLGGGLPALGYTDRRGERLDPPLDKIFAVLREGMERLAGASSRPP 253

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISEN------IKNLVIVDSSVEAHVPDYLLYQESATI 281
              +EPG  +V +   +   V  ++         +  + +       + +    +     
Sbjct: 254 AFLVEPGRHLVADHGAIRAHVARLTTRRGPDGERERWLFLSCGKFNGLYEMDQVRYPLVF 313

Query: 282 YPNTGP-----YTAMVCGRSCLAGDIFG----EFHFEKPVKIGDRISFEDVAGYNINRKN 332
                         +V G +C + D +          + +  GD +       Y  +   
Sbjct: 314 PSRPDAAGSDLVPVVVAGPTCDSDDAYAHEHPRVRVPRALASGDPVWVLSAGAYAASYTT 373

Query: 333 -WFNGI-NMP 340
             FNG   +P
Sbjct: 374 EGFNGFAPLP 383


>gi|90579305|ref|ZP_01235115.1| Orn/DAP/Arg decarboxylase, family 2 [Vibrio angustum S14]
 gi|90440138|gb|EAS65319.1| Orn/DAP/Arg decarboxylase, family 2 [Vibrio angustum S14]
          Length = 404

 Score =  117 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 66/387 (17%), Positives = 131/387 (33%), Gaps = 31/387 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           YYL+D +K  +N +  L       +  K+  + K      +   ++         S  E 
Sbjct: 17  YYLLDSKKFEDNFECLLDAFNSIYSNTKIGYSYKTNYIPKLCKIIDIKGGYAEVVSDMEY 76

Query: 64  MLGHE-KFGGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKA---QKLHKKI 118
            L  +     E    N  YK   I      N   +  ++  ++   K+ A        + 
Sbjct: 77  DLAIKLGVEPERIIVNGPYKPKNILEKFLLNKSIVNLDSFVEIEYLKEIALKNPTNMIEF 136

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
           G+R N  +  +       +     L +K K+  E +     G+  H   +  +       
Sbjct: 137 GIRCNFDIHNNVVSRFGIDINNPDLLKKLKEISEIKNVKFVGIHCHY-PDRNADSYSVRA 195

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFS------- 222
            K IE     F T  ++I +GGG                +  K++   +           
Sbjct: 196 KKIIEVASSLFTTPPKYIDIGGGFFGKMDERLKKQFSSYHDYKEYANNIATEFKRAYSAL 255

Query: 223 -EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV----PDYLLYQE 277
            ++    ++LEPG A+V +T      V+DI       + + S  + ++        +  +
Sbjct: 256 PKEEQPILFLEPGSALVADTMKFVCRVIDIKNIRGTNIAMTSGSKFNIGLLSSTVNMPLD 315

Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
             + Y N       + G +C+  D   + +    +  GD + F +V  Y+I  K  F  +
Sbjct: 316 VHSKYINDKVNEYDISGFTCIESDYLFKGYT-GCLFQGDFLIFNNVGSYSIVFKPPFI-L 373

Query: 338 NMPTIAVKNVDGTIKAIREFSYNDYYN 364
               I     +      R+ + +D + 
Sbjct: 374 PNVPIIELTGNSVELIKRQETVDDIFE 400


>gi|197106780|ref|YP_002132157.1| ornithine decarboxylase [Phenylobacterium zucineum HLK1]
 gi|196480200|gb|ACG79728.1| ornithine decarboxylase [Phenylobacterium zucineum HLK1]
          Length = 423

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 46/350 (13%), Positives = 94/350 (26%), Gaps = 23/350 (6%)

Query: 20  TALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSLYEVMLGHEKFGGETHAYN 78
            A + + N    +  A+K   +  + +TL +        +S+ E+ L      G   A+ 
Sbjct: 31  AARWFQDNFQGDVFYAVKANPSPWVIETLVKSGVNSFDVASVPEIELVSAHAPGARMAFM 90

Query: 79  VAYKDCE---IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILAD 135
              K               T   +T  +L K  + A      + L +   VS      + 
Sbjct: 91  HPVKSRRAIAQAYFDHGVKTFALDTHEELQKILE-ATGGADDLSLIVRLGVSAEGASYSL 149

Query: 136 PNRPFSRLGEKCKDKIES--EIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQI 193
             +      E     + +    ++  G+ FH   +      + A +    +        +
Sbjct: 150 AGKFGVDAWEAPSLLLAARRATQDRMGVSFHVGSQCMRPTAYQAAMAQANRAIVRAGVLV 209

Query: 194 EWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE 253
           + + +GGG           D           ++     E  E        L      +  
Sbjct: 210 DVVDVGGGFPSVYPGMMPPDMADYTDSIHRGFAEMSVHEDTELWAEPGRGLVAEATSLLT 269

Query: 254 NIKNLVIVDSSVEAH----VPDYLLYQESATIYPNTGP-----------YTAMVCGRSCL 298
            ++        +       + D    +    +    G                  G +C 
Sbjct: 270 KVELRKGDALYLNDGSYGSLFDAAHMKWPFPVKLYRGEGEAAHEVEGPLKPYRFYGPTCD 329

Query: 299 AGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
           + D   G F   + ++ GD +    +  Y I     FNG           
Sbjct: 330 SIDHMPGPFWLPEDIREGDYVEIGMLGAYGIAMSTRFNGFGDAETVAVGD 379


>gi|260752528|ref|YP_003225421.1| Orn/DAP/Arg decarboxylase 2 [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|258551891|gb|ACV74837.1| Orn/DAP/Arg decarboxylase 2 [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 393

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 53/349 (15%), Positives = 91/349 (26%), Gaps = 22/349 (6%)

Query: 19  DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSLYEVMLGHEKFGGETHAY 77
             A +  +    K + A+K   +  +  +L          +S  EV L        T  +
Sbjct: 30  RAARFFIEKFAGKTMYAVKANPSPALIRSLWDAGITQYDVASANEVRLVRHLLPKATLCF 89

Query: 78  NVAYKD---CEIDAVLSNCDTIIFNTVSQLNKF---KDKAQKLHKKIGLRINPSVSYSKF 131
               K                   +   +L+K     D A+ L   + LR++   S  K 
Sbjct: 90  MNPVKAEEVIREAYFEHGVRAFSLDNQDELDKILRATDYAKDLTLCVRLRVSSDHS--KL 147

Query: 132 ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFIT 191
            LA                       + G+ FH   +  S   +   +            
Sbjct: 148 SLASKFGIDPAQSASLLMAARQASDAL-GICFHVGSQAMSPQAYIQAMALARDAIVQAGV 206

Query: 192 QIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251
            ++ I +GGG      D   ++         E +         E        L+     +
Sbjct: 207 TVDVIDVGGGFPSIYPDLEPQNLENYFHSIHEAFESLPISYSAELWAEPGRALSAEYSSL 266

Query: 252 SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG----------PYTAMVCGRSCLAGD 301
              ++     D  +       L                              G +C   D
Sbjct: 267 IVRVERRRGTDLYINDGAYGALFDAAHLDWRFPVKLLRAESNQARDINFSFYGPTCDDMD 326

Query: 302 IF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349
              G F     VK+GD I    +  Y    +  FNG   P++ V   D 
Sbjct: 327 YMAGPFPLPADVKVGDYIEIGMLGAYGNAMRTEFNGFT-PSMTVIADDQ 374


>gi|160885676|ref|ZP_02066679.1| hypothetical protein BACOVA_03680 [Bacteroides ovatus ATCC 8483]
 gi|156108489|gb|EDO10234.1| hypothetical protein BACOVA_03680 [Bacteroides ovatus ATCC 8483]
          Length = 408

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 55/385 (14%), Positives = 118/385 (30%), Gaps = 32/385 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           +YL+D  +  NN        +       +  + K          +N+        S  E+
Sbjct: 23  FYLLDSGQFRNNFIELKDTFRKIYPNFNIAYSYKTNYTPKFCKIVNELGGYAEVVSEMEL 82

Query: 64  MLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK---KI 118
            +        +   +N       +++  L    T   ++V +L   K  A++       +
Sbjct: 83  EIALRVGVESKRIIWNGPIKNAKKLEEFLVAGGTDNIDSVEELAVVKAIAERHPDKVLNL 142

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
           G+R N  V          +       +  +       KNV+ + F  +   +    +SA 
Sbjct: 143 GIRCNYDVQDGVVSRFGLDVDSEDFQQVLE--FVITTKNVHFINFQCHFAKRQIEYWSAR 200

Query: 179 LKNIEKEFGHFITQIEWISLGGGIH----------FTDKDYPVKDFCQRLKEFSEKYS-- 226
            K + +         E + +GGG+           F +     + + +        Y   
Sbjct: 201 AKGMVELIDRIGIIPERLDVGGGLFGKMADSLKAQFKNDIPDYQAYAEATATIFADYFAD 260

Query: 227 ----VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
                ++ +EPG A+V +      TV  I       +      + ++    +      I 
Sbjct: 261 KNVKPELLIEPGSAVVGDCMKFVGTVKTIKCVRGKWMATVLGSQKNISMSGINPPMEVIT 320

Query: 283 PNTGPYTA---MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                         G +C+ GD+    +    +   D I   +   Y++  K  F   N 
Sbjct: 321 MGGEQKEYKDLDFVGFTCIEGDVLYNNYN-GKLAHEDAIVISNCGSYSLVMKPPFILPNF 379

Query: 340 PTIAVKNVDGTIKAIRE-FSYNDYY 363
           P   +       + I+    ++D +
Sbjct: 380 P--VLDICGEKTEVIKRGEVFDDLF 402


>gi|148285661|gb|ABQ57527.1| LolD [Neotyphodium sp. PauTG-1]
          Length = 396

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 46/351 (13%), Positives = 93/351 (26%), Gaps = 36/351 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++              V    A+K      +  TL     G   +S  E+ L
Sbjct: 33  FFVADLNDVVRKWAAWKEAL--PDVTPFFAVKSSYDRRLIQTLATCGAGFDCASTEEIEL 90

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                 G E   +    K      +        I F+   +L K      +    + +  
Sbjct: 91  ILSLGIGAERIIFTHPCKPVSSLGLCRKLGITLITFDNECELRKLHHHYPEAQTVLRVFA 150

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFH----NNCENKSFLCFSAM 178
           +   +                G      ++     + G  FH       +  +++     
Sbjct: 151 DDPTNADPLGTKFGAARDDFDG--LVRLVKELNMQLAGASFHAAPSVAVDAAAYVRGIRD 208

Query: 179 LKNIEKEFGHFITQIEWISLGGGI----HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
              +             + +GGG                  +  K    +  ++I  EPG
Sbjct: 209 AAEVFARARQVGLNPTVLDIGGGYTDSTFQQIAGAVRPAIAECFKSEVGEGRLRILAEPG 268

Query: 235 EAIVTNTTTLNTTV-----------------LDISENIKNLVIVDSSVEAHVPDYLLYQE 277
                +   L   V                 L I++ I +  ++   V        + +E
Sbjct: 269 TLFSCSPFYLAVKVVARRVNATAFGHEPATRLYINDGIYSNFMMRFIVNMTFSPAAVIRE 328

Query: 278 SATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFE-KPVKIGDRISFEDVA 324
                            + GRSC + D           V++GD + F+D+ 
Sbjct: 329 GVWHDQADHTMRGEACSLWGRSCDSNDCINRDCRLGPEVRVGDWLVFKDMG 379


>gi|302875945|ref|YP_003844578.1| Orn/DAP/Arg decarboxylase 2 [Clostridium cellulovorans 743B]
 gi|307686655|ref|ZP_07629101.1| Orn/DAP/Arg decarboxylase 2 [Clostridium cellulovorans 743B]
 gi|302578802|gb|ADL52814.1| Orn/DAP/Arg decarboxylase 2 [Clostridium cellulovorans 743B]
          Length = 485

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 65/444 (14%), Positives = 144/444 (32%), Gaps = 87/444 (19%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           P +++  +K+  N+        N     K+  A+K   + G+   +N+   G   SS  E
Sbjct: 41  PLHILFGKKIEENIMEFRNALNNNYTNSKICFAVKSSCSIGVLRIINKLGCGVDVSSYNE 100

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGL 120
                  +   +   +N   K  EI  +    D  I  ++V +  +  + ++ ++KK  +
Sbjct: 101 FKFAEIAEIPYDRMVFNGNCKTDEIIELAITKDILINVDSVYEFERILEISKNINKKAKV 160

Query: 121 RINPS---VSYSKFILADPNRPFSRLGEKCKDK--------IESEIKNVNGLMFHNNCEN 169
            I  S   V  +       +  +++ G    +         +  +  +V G   H   + 
Sbjct: 161 LIRLSGLKVDKATDECIYTSGEWTKFGINYLEAKELLTNNSVYHQYIDVYGFQVHIGSQI 220

Query: 170 KSFLCFSAMLKNI---EKEFGHFITQIEWISLGG-------------------------- 200
             +  +   ++ I    +E  H    +  I++GG                          
Sbjct: 221 GYYEAYINAIEKIVKLSEELAHIGNFMRIINIGGGFPINYVDKVEWEQFQKSMAYKGEEN 280

Query: 201 -----------GIHFTDKDYPVKDFCQRLKEFSEKY------------------SVQIYL 231
                           +  Y   +  + L++    Y                    ++ +
Sbjct: 281 SNCFIWKNEKADYKVNELFYTDYEKSKMLEKVLNTYINYKDSSKKIKDVLKEIGEPELII 340

Query: 232 EPGEAIVTNTTTLNTTVLDISENI--------KNLVIVDSSVEAHVPDYLLYQESATIYP 283
           EPG +IV +       V  I +             V    SV  ++ +     +  +   
Sbjct: 341 EPGRSIVGDAGITIAKVNGIKKVNGNNLLVVEMGNVNYAGSVIHNLFNCWDLFKDYSNVD 400

Query: 284 NTGPYTAMVCGRSCLAGDIFGEFH--FEKPVKIGDRISFEDVAGYNIN--RKNWFNGINM 339
           +   ++A +CG  C  GD+   +   F++  K G+ +   DV G   +    +  N   +
Sbjct: 401 SNEEFSAFICGNLCYNGDMISNYKIKFDREPKRGEYVITYDVGG-TESHFFASNANMNPI 459

Query: 340 PTIAVKNVDGTIKAIR-EFSYNDY 362
           P+  + N    I+ ++   +  D 
Sbjct: 460 PSRLLINDKNDIEILKSRQTLEDL 483


>gi|297602100|ref|NP_001052100.2| Os04g0136500 [Oryza sativa Japonica Group]
 gi|255675146|dbj|BAF14014.2| Os04g0136500 [Oryza sativa Japonica Group]
          Length = 378

 Score =  116 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 38/347 (10%), Positives = 87/347 (25%), Gaps = 38/347 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           ++++D  K+++            GV+   A+KC     +   L     G   +S  E+  
Sbjct: 52  FHVLDLAKVVDLYAGWRRAL--PGVRPFYAVKCNPDTALLGALAALGAGFDCASRAEIEA 109

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       Y    K     A  +    +   T     +     +       L    
Sbjct: 110 VLALGVPPAAIVYANPCKPGAHVAFAAEAG-VNVTTYDSEEEVAKVKRCHPSCELLLRIK 168

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS-------FLCFSA 177
           +       +    +       K    + +                +              
Sbjct: 169 APDCGGVKVRPRPQVPRATRNKVLPLLRAAPPRGPRRGRRVVPRRQRRVPRGRLPRRHRG 228

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI 237
             + +++  G  +  +  +++ GG               R+     +       +  E  
Sbjct: 229 RARGVQRAAGLGMPPMRVLNIAGGFPGRYFAETAFTLAARVIGKRRR------GDVREYW 282

Query: 238 VTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA--MVCGR 295
           + +                       S+   + D  + +         G  T    V G 
Sbjct: 283 IDDGVYG-------------------SLNCILLDSYVPRPRPLAGARPGEETHASTVFGP 323

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
           +C + D     +    + + D + F+D+  Y     + FNG     I
Sbjct: 324 TCDSIDTVVTGYQLPEMSVDDWLVFDDMGAYTTAAGSSFNGFATSAI 370


>gi|29830040|ref|NP_824674.1| lysine/ornithine decarboxylase [Streptomyces avermitilis MA-4680]
 gi|29607150|dbj|BAC71209.1| putative diaminopimelate decarboxylase [Streptomyces avermitilis
           MA-4680]
          Length = 485

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 54/354 (15%), Positives = 104/354 (29%), Gaps = 34/354 (9%)

Query: 24  IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG-HEKFGGETHAY-NVAY 81
           +     V    A+K      +   L +   G   +S  E+ L        E     + A 
Sbjct: 87  VAPGTPVLHAFAVKATPLVPVLRLLGEAGIGAEVASPGELALAQAAGVAPERTVLDSPAK 146

Query: 82  KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--KIGLRINPSVSYSKFILADPNRP 139
              E+   L+    +  +   +L++     +       +G+R+NP V             
Sbjct: 147 TPAELREALALGIAVNADNPQELDRIDALVRSAPSGSPVGIRVNPQVGGGSIDALSTATA 206

Query: 140 FSRLGEKCKD--------KIESEIKNVNGLMFHNNCE----NKSFLCFSAMLKNIEKEFG 187
            S+ G   +D        +  ++   +  L  H+  +    +      +      E+   
Sbjct: 207 TSKFGVALRDEGAREWILRAYADRPWLTRLHAHSGSQGMPLSLMARGIAETYALAEEINR 266

Query: 188 HFIT-QIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-------SVQIYLEPGEAIVT 239
           H    QI+ I +GGG+              R      +           +  E G +++ 
Sbjct: 267 HVGRRQIDTIDIGGGLPVNFGSDATTPTYARYARLLAESVPGLFDGRYGLVTEFGRSLLA 326

Query: 240 NTTTLNTTVLDIS---------ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA 290
              T+   V              +    V   +          +    A  +P  GP   
Sbjct: 327 KHGTVVARVEYAKSAGGRAVAVTHAGVQVATRTVYAPASWPLRITAYDAKGHPKAGPEVV 386

Query: 291 M-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343
             V G +C AGD+         ++ GD ++  D   Y       +N +  P I 
Sbjct: 387 QDVAGPACFAGDLLAVGRALPLLEQGDHVAALDTGAYYFAHHYAYNSLARPGIY 440


>gi|33322394|gb|AAQ06922.1|AF496253_1 diaminopimelate decarboxylase [Lactobacillus delbrueckii subsp.
           lactis]
          Length = 119

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 34/103 (33%), Gaps = 4/103 (3%)

Query: 267 AHVPDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFED 322
            ++   L   E + +              + G+ C +GDI  +       + GD ++   
Sbjct: 11  DNIRPALYQAEYSAVVADRPQAEDEERVNLXGKYCESGDILIKSCPLPKTEPGDVVALLS 70

Query: 323 VAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
              Y  +  + +N    P +           I+  SY+D   N
Sbjct: 71  TGAYGYSMASNYNRNPRPAVVFAEDGVDQLVIKRESYDDLIAN 113


>gi|56551916|ref|YP_162755.1| Orn/DAP/Arg decarboxylase 2 [Zymomonas mobilis subsp. mobilis ZM4]
 gi|56543490|gb|AAV89644.1| Orn/DAP/Arg decarboxylase 2 [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 393

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 54/349 (15%), Positives = 93/349 (26%), Gaps = 22/349 (6%)

Query: 19  DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSLYEVMLGHEKFGGETHAY 77
             A +  +    K + A+K   +  +  +L          +S  EV L        T  +
Sbjct: 30  RAARFFIEKFAGKTMYAVKANPSPALIRSLWDAGITQYDVASANEVRLVRHLLPEATLCF 89

Query: 78  NVAYKD---CEIDAVLSNCDTIIFNTVSQLNKF---KDKAQKLHKKIGLRINPSVSYSKF 131
               K                   +   +L+K     D A+ L   + LR++   S  K 
Sbjct: 90  MNPVKAEEVIREAYFEHGVRAFSLDNQDELDKILRATDYAKDLTLCVRLRVSSDHS--KL 147

Query: 132 ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFIT 191
            LA                      ++ G+ FH   +  S   +   +            
Sbjct: 148 SLASKFGIDPAQSASLLMAARQASDSL-GICFHVGSQAMSPQAYIQAMALARDAIVQAGV 206

Query: 192 QIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251
            ++ I +GGG      D   ++         E +         E        L+     +
Sbjct: 207 TVDVIDVGGGFPSIYPDLEPQNLENYFHSIHEAFESLPISYSAELWAEPGRALSAEYSSL 266

Query: 252 SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG----------PYTAMVCGRSCLAGD 301
              ++     D  +       L                              G +C   D
Sbjct: 267 IVRVERRRGTDLYINDGAYGALFDAAHLDWRFPVKLLRAESNQARDINFSFYGPTCDDMD 326

Query: 302 IF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349
              G F     VK+GD I    +  Y    +  FNG  MP++ V   D 
Sbjct: 327 YMAGPFPLPADVKVGDYIEIGMLGAYGNAMRTEFNGF-MPSMTVIADDQ 374


>gi|163761098|ref|ZP_02168175.1| ornithine decarboxylase [Hoeflea phototrophica DFL-43]
 gi|162281649|gb|EDQ31943.1| ornithine decarboxylase [Hoeflea phototrophica DFL-43]
          Length = 417

 Score =  116 bits (289), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 48/364 (13%), Positives = 100/364 (27%), Gaps = 36/364 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSLYEV 63
           P Y      L  +    + +      +   A+K      +  TL +        +S  E 
Sbjct: 30  PLYCFRPDVLKQDARQFMKLFPG---ETAYAVKTNGEPMVLKTLVEAGVKIFDVASPGEF 86

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH----KKIG 119
                        Y    K      +      I   ++   ++     + +         
Sbjct: 87  EAVRAASPDAEMLYMHPVKAQSDIRLALETYGIRVMSLDHEDEIAKVLRIVRALDLDPAS 146

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN--VNGLMFHNNCENKSFLCFSA 177
           + I   +      + + ++ F        + ++   +     GL FH   + +    +  
Sbjct: 147 ITIFVRLQTKGHAMYELSKKFGAAPGHAVELVQRLDRIGFKVGLCFHVGSQVEEPDSYEQ 206

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD--------------FCQRLKEFSE 223
            LK+ +         +  + +GGG        P +                    +   +
Sbjct: 207 ALKSADWVRNRAGVNLVGLDVGGGFPAVYGHDPNRKAKPMPPLEELMGDLRANIKEWAFD 266

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVL-----DISENIKNLVIVDSSVEAHV-PDYLLYQE 277
              + +  EPG  +V    +L   VL      +  N      +  S    +        +
Sbjct: 267 D--MPLVAEPGRVVVARAFSLIVRVLLRKGRRLYINDGIWASLSDSWTGKITLPARFIPD 324

Query: 278 SATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNW 333
            A               VCG +C + DI     +    V  GD I    +  Y+++ +  
Sbjct: 325 PARKIRKGKAGTVVPFRVCGATCDSVDILSRPFWLPETVDTGDWIEIGHIGAYSLSLRTR 384

Query: 334 FNGI 337
           FNG 
Sbjct: 385 FNGF 388


>gi|156341492|ref|XP_001620778.1| hypothetical protein NEMVEDRAFT_v1g147087 [Nematostella vectensis]
 gi|156206104|gb|EDO28678.1| predicted protein [Nematostella vectensis]
          Length = 251

 Score =  116 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 46/241 (19%), Positives = 83/241 (34%), Gaps = 12/241 (4%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            +P Y+ D +K+ +     ++       VK+  A+K  +   +    +Q   G  + S  
Sbjct: 14  GSPLYVYDTEKISSQYHRIIHAFSKVKSVKINYAVKALSNINILKLFHQLGAGLDTVSEQ 73

Query: 62  EVMLGH-EKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           EV LG       E   +        EI+ V      I  + +S L  F  K       + 
Sbjct: 74  EVQLGLTAGVAPENIIFTPNGVSLEEIEEVAKLGVQINIDNLSILELFGQK--HPEIPVC 131

Query: 120 LRINPSVSYSKFILADPNRPFSRLGE------KCKDKIESEIKNVNGLMFHNNCENKSFL 173
           +RINP V              S+ G         K  +E+   ++NG+  H   +     
Sbjct: 132 IRINPHVMAGGNSKISVGHIDSKFGISIYQVPHIKRIVENTGMHINGIHMHTGSDILDID 191

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
            F    + +      F   +++I  G G     K+  +    ++L +   K   Q   + 
Sbjct: 192 TFIRATEILFNVASQFN-TLDFIDFGSGFKVPYKEGDIATDIEQLGKQLTKRFNQFCKDY 250

Query: 234 G 234
           G
Sbjct: 251 G 251


>gi|147818133|emb|CAN69215.1| hypothetical protein VITISV_030355 [Vitis vinifera]
          Length = 391

 Score =  116 bits (289), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 45/350 (12%), Positives = 96/350 (27%), Gaps = 33/350 (9%)

Query: 16  NNLDTAL-YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGE 73
           N + +   + +    V    A+KC     +   L         +S  E+        G +
Sbjct: 42  NRIASWDMWKQALPNVVPYYAVKCNCQPPLITALASLGANFDCASRAEIETVMALGVGAQ 101

Query: 74  THAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFIL 133
                         A L     I         K         +            S   L
Sbjct: 102 QIV--SPIHTRFKAAHLDPKRIISTQLGMGRYK-----WYQSRSPTPVWGSLQKESWRSL 154

Query: 134 ADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH----F 189
                           +  +    V G+ FH   +      +   + +    F       
Sbjct: 155 GAKFGALPEEVVPLLQQASAAGLRVIGVSFHVGSKVNDPQVYRGAIASARGVFDAAAQLK 214

Query: 190 ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV--------QIYLEPGEAIVTNT 241
           +  +  + +GGG+    +     +    +KE +  Y          +I  EP        
Sbjct: 215 LPPMHVLDIGGGL---QESPTFHEIAAVIKEATNDYFPSSETSEDLKIMAEPERLFAETA 271

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI---------YPNTGPYTAMV 292
            TL + ++      +              +   Y +S+ +         + N   +++ V
Sbjct: 272 FTLVSNIIGKRVRGEKREYWIDDGIYRSFNLPAYDKSSMMVKPLLGGSEWMNKAKFSSTV 331

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
            G +C + D+         + + D + F ++  Y  +    FNG ++ +I
Sbjct: 332 FGPTCDSTDMVVAESQLPELHMNDVLVFYNMGAYTASAGTRFNGFDISSI 381


>gi|262199172|ref|YP_003270381.1| Orn/DAP/Arg decarboxylase 2 [Haliangium ochraceum DSM 14365]
 gi|262082519|gb|ACY18488.1| Orn/DAP/Arg decarboxylase 2 [Haliangium ochraceum DSM 14365]
          Length = 486

 Score =  115 bits (288), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 69/410 (16%), Positives = 128/410 (31%), Gaps = 60/410 (14%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVK---LLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            +++    L +NL     +  +   +   +  ALK F    + + L +   G    SL E
Sbjct: 65  VHVVHADTLRSNLTRFSRLLSDTFARDTLVAWALKSFPVQAVVNELAKEQCGADVGSLQE 124

Query: 63  VMLGH-EKFGGETHAYNV-AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--KI 118
           + +       G        A    E+ A++    T + +   +    +  A    +   I
Sbjct: 125 LRMALAAGIPGRDIICTGVAKSAQELRAIVDCGATCVLDNADEAAALESIAASAGRVVAI 184

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEK---CKDKIESEIK----NVNGLMFHNNCENKS 171
           G+R+NP V+     +       S+ G      +D + +        V  +  H       
Sbjct: 185 GVRVNPEVATPTHAMIATGAIGSKFGVPIGAAEDFVAAVAAHAHLRVELVHMHIGAHFYH 244

Query: 172 FLCFSA----MLKNIEKEFGHFITQIEWISLGGGI-------------HFTDKDYPVKDF 214
               S       +       H    I  + +GGG                 D+ + +   
Sbjct: 245 IDPESFARAINREAELVSALHRRYPIRRVDIGGGFRFPFLAPRQARQMGMDDERFHLVTQ 304

Query: 215 CQRLKEFS---------EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK--------- 256
              L+                +Q+  EPG AIV   +     VL + E  +         
Sbjct: 305 PDVLERTMAILSQRVIDMPSDIQVVAEPGTAIVCGASFSLGQVLAVRELARLDSPLDGRK 364

Query: 257 ----NLVIVDSSVEAHVP---DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF---GEF 306
                ++   S+ E  +      LL Q           + A V G  C AGD+    G +
Sbjct: 365 IGVGWVLGTASTAEFILRAGVPNLLNQTCIADKAEERDFAAGVGGPLCFAGDVLSPPGFY 424

Query: 307 HFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
                 + GD +   +   Y I     F+ +    +A+   DG ++ +R 
Sbjct: 425 LRMARPRPGDVLCLANTGAY-IGCGFNFHNLPRFAVALMERDGNLRTVRR 473


>gi|125564562|gb|EAZ09942.1| hypothetical protein OsI_32240 [Oryza sativa Indica Group]
          Length = 371

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 47/352 (13%), Positives = 92/352 (26%), Gaps = 49/352 (13%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  K+++             V+   A+KC     M   L     G   +S  E+  
Sbjct: 46  FHVFDLAKVVDLHRGWRRAL--PDVRPCYAVKCNPDGAMLAALAALGAGFDCASRAEIEA 103

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                    T  Y    K        +    +   T     +     +   +   L    
Sbjct: 104 VLALGVRPATIVYANPCKPEAHLEYAAEVG-VNLTTYDSEEEVAKVRRCHPRCELLLRI- 161

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
                              G+   D       N +                 A  +  + 
Sbjct: 162 --------------KAPDSGDAKVDLGLKYGANPD----------------EAAREAFDA 191

Query: 185 EFGHFITQIEWISLGGGIHFTDKDYPVKDFC--QRLKEFSEKYSVQIYLEPGEAIVTNTT 242
                +  +  + +GGG                   + F +   V++  EPG        
Sbjct: 192 AAALGMPPMRVLDIGGGFMAGRTFDEAAAVINRALERHFGDLPCVEVIGEPGRYFAETAF 251

Query: 243 TLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGP-------YTA 290
           TL   V+      +            S+   + D+ + +         G        + +
Sbjct: 252 TLAARVIGKRTRGELREYWIDDGLYGSLNCILMDHYVPRPRPLAAAAAGEDTTAATTHAS 311

Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
            V G +C + D     +    + +GD + F+D+  Y     + FNG     I
Sbjct: 312 TVFGPTCDSLDTVVTGYQLPEMSVGDWLVFDDMGAYTTAAGSNFNGFATSAI 363


>gi|87199811|ref|YP_497068.1| Orn/DAP/Arg decarboxylase 2 [Novosphingobium aromaticivorans DSM
           12444]
 gi|87135492|gb|ABD26234.1| Orn/DAP/Arg decarboxylase 2 [Novosphingobium aromaticivorans DSM
           12444]
          Length = 401

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 46/336 (13%), Positives = 87/336 (25%), Gaps = 29/336 (8%)

Query: 26  KNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAYNVAYKDC 84
           +    K L A+K   +  +   L          +S+ EV L        T  +    K  
Sbjct: 37  EKFPGKSLYAVKANPSADLLRVLWDSGVTHYDVASIAEVRLVRATLPEATLCFMHPVKAP 96

Query: 85  ---EIDAVLSNCDTIIFNTVSQLNKF---KDKAQKLHKKIGLRINPSVSYSKFILADPNR 138
                            ++  +L K       A+ L   + LR++   S           
Sbjct: 97  AAIREAYEQHGVRVFSLDSFEELEKIKEACGFAEDLTLCVRLRVSSDYSELS-----LAS 151

Query: 139 PFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWI 196
            F        + +++  +  +  G+ FH   ++ S   +   L+ +          ++ I
Sbjct: 152 KFGCDLTNAAELLQATRQAADSLGVCFHVGSQSMSPHAYVQALERVRAAIVDASVTVDII 211

Query: 197 SLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTT----VLDIS 252
            +GGG                       Y         E        L       ++ + 
Sbjct: 212 DVGGGFPSIYPGMEPPPLEDYFGVIDRTYESLPISYSAELWCEPGRALCAEYNSMIVRVE 271

Query: 253 ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----------YTAMVCGRSCLAGDI 302
                 + ++      + D         +                      G +C   D 
Sbjct: 272 RRRGAELYINDGAYGALFDAAHVGWRFPVRVLREEVANDGVEIEMEPFSFYGPTCDDMDH 331

Query: 303 F-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
             G F     +K+GD I    +  Y    K  FNG 
Sbjct: 332 MEGPFELPADMKVGDYIEIGMLGAYGAAMKTAFNGF 367


>gi|149186768|ref|ZP_01865079.1| diaminopimelate/ornithine decarboxylase [Erythrobacter sp. SD-21]
 gi|148829676|gb|EDL48116.1| diaminopimelate/ornithine decarboxylase [Erythrobacter sp. SD-21]
          Length = 400

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 45/345 (13%), Positives = 84/345 (24%), Gaps = 25/345 (7%)

Query: 26  KNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAYNVA-YKD 83
           +    K L A+K   +  +   L          +S+ EV +        T  +       
Sbjct: 37  EKFPGKSLYAVKANPSPDLVQILWDNGVTHYDVASIAEVRMVRSVLPDATLCFMHPVKSP 96

Query: 84  CEIDAVLSNCDTIIFNTVSQLNKFKDK----------AQKLHKKIGLRINPSVSYSKFIL 133
             I           F+  S     K            A  L   + LR++   +      
Sbjct: 97  GAIREAYFQHGVKTFSLDSSEELLKIVEATRGEDGEAATDLRLCVRLRVSSEHAALSLAS 156

Query: 134 ADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQI 193
                         + +  ++   V    FH   +  S   +   L             I
Sbjct: 157 KFGCDLTEAPALLQETRQYADWLGV---CFHVGSQAMSPFAYVQALDRTRAAIAEASVVI 213

Query: 194 EWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTT----VL 249
           + I +GGG                 K   + +         E        L       V+
Sbjct: 214 DMIDVGGGFPSVYPGMEPPPLEDYFKIIHQHFYALPIAYNAELWCEPGRALCAEYSSLVV 273

Query: 250 DISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----NTGPYTAMVCGRSCLAGDIF- 303
            + +     + ++      + D    +    +                 G +C   D   
Sbjct: 274 KVEKRRGEELYINDGAYGALFDAAHVEWKFPVRALEDDLIKPEMDFAFYGPTCDDADYMP 333

Query: 304 GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348
           G F   + ++ GD I    +  Y    K  FNG       +   +
Sbjct: 334 GPFGLPEDIQAGDYIEIGMLGAYGAAMKTDFNGFGAAERIIVTDE 378


>gi|255023266|ref|ZP_05295252.1| diaminopimelate decarboxylase [Listeria monocytogenes FSL J1-208]
          Length = 283

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 33/244 (13%), Positives = 79/244 (32%), Gaps = 22/244 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   + +         +  GVK  +  A K F+A  ++  + +        S 
Sbjct: 32  GTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSG 91

Query: 61  YEVMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+       F  E   ++   K  +    A+       + +   +++  +D   + ++K
Sbjct: 92  GELYTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVIDNYYEISLLEDILIERNEK 151

Query: 118 --IGLRINPSVSYSKFILADPNRPFSRLGEKCKD----------KIESEIKNVNGLMFHN 165
             + +R+ P +           +  S+ G    +             S   ++ GL  H 
Sbjct: 152 ASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHI 211

Query: 166 NCENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVK-DFCQRLKE 220
             +      F    + I  +   +        + ++LGGG            +  + + +
Sbjct: 212 GSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVCQ 271

Query: 221 FSEK 224
             ++
Sbjct: 272 IMDE 275


>gi|297157946|gb|ADI07658.1| diaminopimelate decarboxylase [Streptomyces bingchenggensis BCW-1]
          Length = 447

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 53/363 (14%), Positives = 103/363 (28%), Gaps = 43/363 (11%)

Query: 24  IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAY-NVAY 81
           +     V    A+K  +   +   L     G   +S  E+ L        E       A 
Sbjct: 40  VAPGTPVLHAFAVKAASLVPVLRLLADEGIGCEVASPGELALARAAGVRAEHIVLDAPAK 99

Query: 82  KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL--------RINPSVSYSKFIL 133
              E+   +     +  +   +L +     +  +             R+NP V       
Sbjct: 100 TTAELREAIELGIAVNADNPQELARLDALVRPRNGPGPALPPGPLGLRVNPQVGGGSIGA 159

Query: 134 ADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKSFLCFSAMLKNIEKE 185
                  S+ G    D    E           +  L  H   +       +A ++   + 
Sbjct: 160 LSTATATSKFGVALLDPGAREWVVNAFTRRPWLTRLHAHVGSQGCPLELMAAGVRAAYEL 219

Query: 186 FGHFIT-----QIEWISLGGGIHFTDKDYP----VKDFCQRLKEFSEKYS---VQIYLEP 233
                      QI+ + +GGG+             +D+ + L +           +  E 
Sbjct: 220 AEEINRAVGRQQIDTLDIGGGLPVNFGSDEITPGYRDYARLLLDTVPGLFDGRYGLVTEF 279

Query: 234 GEAIVTNTTTLNTTVLD------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP---- 283
           G +++  + T+   V            I +     ++     P+    + +A  +     
Sbjct: 280 GRSLLAKSGTVLARVEYAKSAGGRPIAITHAGAQLATRTVFAPESWPLRVTAYDWEGVAK 339

Query: 284 ---NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
                GP    V G  C AGD+         +K GD ++  D   Y  +    +N +  P
Sbjct: 340 PTGPDGPVAQDVAGPCCFAGDLVAVDRPLPELKAGDLVALLDTGAYYFSNHFAYNSLPRP 399

Query: 341 TIA 343
            I 
Sbjct: 400 GIY 402


>gi|91762667|ref|ZP_01264632.1| Lysine/ornithine decarboxylase [Candidatus Pelagibacter ubique
           HTCC1002]
 gi|91718469|gb|EAS85119.1| Lysine/ornithine decarboxylase [Candidatus Pelagibacter ubique
           HTCC1002]
          Length = 392

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 47/349 (13%), Positives = 104/349 (29%), Gaps = 19/349 (5%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEV 63
           P Y I K+ + +              K+L A+K  +   +  T+ +        +S+ E+
Sbjct: 19  PIYCIRKKSIQSASTYFRNKFPG---KVLYAVKTNSHPEVLKTIVESGIENFDVASIQEI 75

Query: 64  MLGHEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                       +Y         I     N +   F+  ++    K        K     
Sbjct: 76  KDIRAISPDAKCSYMHTVKSRESIKEAYFNYNIKAFSLDTKDELIKIIEATNQAKDLELF 135

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLK 180
                 ++    D ++ F  L  +    +    +     GL FH   +    + ++    
Sbjct: 136 VRVAVSNEHAEIDLSKKFGVLTSEATGLLRLTKQYAKKIGLSFHVGSQCMHPISYAKGTG 195

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            I           ++I++GGG      +   +      +E  +  +     +  E +   
Sbjct: 196 EIGNIIKKTKIIPDYINIGGGFPAIYPNLVPQPLENYFEEIKKSLTNLELEKLPELLCEP 255

Query: 241 TTTLN----TTVLDISENIKNLVIVDSSVEAHVPDY----LLYQESATIYPNTGPYT--- 289
              +     +T++ ++   K  + ++      + D     ++Y                 
Sbjct: 256 GRAIVAESGSTIVRVNLRKKQKLYINDGTYGTLFDAGTPNMVYPSRLIKSSKIISKKLTA 315

Query: 290 AMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
               G +C + D   G F     +K  D I    +  Y +  +  FNG 
Sbjct: 316 FDFYGPTCDSMDYMKGPFLLPNNIKENDYIELGQLGAYGLTFRTQFNGF 364


>gi|126740708|ref|ZP_01756394.1| Putative Ornithine decarboxylase [Roseobacter sp. SK209-2-6]
 gi|126718223|gb|EBA14939.1| Putative Ornithine decarboxylase [Roseobacter sp. SK209-2-6]
          Length = 383

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 51/358 (14%), Positives = 109/358 (30%), Gaps = 23/358 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGTTSSSLYEV 63
           P      + L +  +         G  +  A+K      +  + +   ++    +S  E+
Sbjct: 23  PILYFSPRVLHHVAERFQAGF---GGLVTYAVKANPHPAVLSNLVAAGINAFDVASPAEM 79

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                        YN   +  E        D   ++        K  A    K+I +R  
Sbjct: 80  EAVRTASAEAVMHYNNPMRSREEIDAGIKYDVASWSVDELSELEKLHAVPRSKEIAVRFA 139

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIE--SEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
             VS       D    F     +  + ++  +       L FH   + +    +   +  
Sbjct: 140 LPVSG---AAYDFGSKFGAAPLEAVELLKRVAAEGWTPALCFHPGTQCEDEAAWVEYIHA 196

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDY--PVKDFCQRL----KEFSEKYSVQIYLEPGE 235
            ++        I  +++GGG           ++     +    +E       Q+  EPG 
Sbjct: 197 AKRIVDAAGVPIARLNVGGGFAANRDGEAPDLERVFSAINLATQEAFGAQRPQLICEPGR 256

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH--VPDYLLYQESATI-----YPNTGPY 288
           A+V+ + TL   +  + +  + + + D        + D  L      +     +      
Sbjct: 257 AMVSESFTLAARIKGMRKGGEVIFLNDGIYGGLVDIRDMGLPGRVEVVNADGQHRQGERR 316

Query: 289 TAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
             +V G +C + D   +        + GD + F  +  Y+      FNG  +  +A  
Sbjct: 317 PRVVFGPTCDSLDRLPDGLPLPEDTRTGDYVLFPGLGAYSSAMSTQFNGYGLSDVATV 374


>gi|300023366|ref|YP_003755977.1| Orn/DAP/Arg decarboxylase 2 [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299525187|gb|ADJ23656.1| Orn/DAP/Arg decarboxylase 2 [Hyphomicrobium denitrificans ATCC
           51888]
          Length = 392

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 57/338 (16%), Positives = 110/338 (32%), Gaps = 22/338 (6%)

Query: 19  DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG---TTSSSLYEVMLGHEKFGGETH 75
             A +   N   ++  A K  ++  +   L  Y  G      +S+ E+       G   H
Sbjct: 30  RAARWFINNFPGEVAYAYKANSSVFLVGAL--YGAGITQFDVASVAELEDAATIPGVRLH 87

Query: 76  AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYS-KFILA 134
             +       I     + D   F  +   ++ +   ++      L +   +S   K    
Sbjct: 88  FMHPVKSRYAIRRAYFDYDIKCFA-LDTEDELQKIVEETDGAKDLELFVRISVPAKNSRV 146

Query: 135 DPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQ 192
                F   G+K +  +    +  +  G+ FH   +  +   ++   + ++K        
Sbjct: 147 PLEHKFGITGQKAQRLLVKTRQVADELGITFHVGSQTTTPDAYAMAFEEVKKHIVKAGVV 206

Query: 193 IEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEKY----SVQIYLEPGEAIVTNTTTLN 245
           ++ I +GGG      D       DF + +K   +K       ++  EPG A+V    +L 
Sbjct: 207 VDAIDIGGGFPSRYTDSVPARLSDFIEVIKSSMDKMPVTEHCRLICEPGRALVAEAESLI 266

Query: 246 TTVLDISENIKNLVIVDSS----VEAHVPDYLLYQ-ESATIYPNTGPYTAMVCGRSCLAG 300
             V       +  +           AH+      +     + PN       + G +C + 
Sbjct: 267 VKVDLRKSGNQLFINDGGYGALFDSAHIGFVFPVRLIRPGLDPNEPLEPFELWGPTCDSI 326

Query: 301 DIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
           D   G F     V+ GD I   ++  Y       FNG 
Sbjct: 327 DRMKGPFMLPASVREGDYIEIGNIGAYGRALATRFNGY 364


>gi|145529756|ref|XP_001450661.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124418283|emb|CAK83264.1| unnamed protein product [Paramecium tetraurelia]
          Length = 888

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 50/362 (13%), Positives = 113/362 (31%), Gaps = 33/362 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSLYEVM 64
           + + +  +L N +++         +    A+K      +   +     G    +S  E+ 
Sbjct: 503 FMIYNSNELKNKVNSWKQTL--PWITPYYAIKSNPIEPLIQDIINGPFGTFDCASKGEIQ 560

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +  +         Y+   K+ +      N        +++ +L K +  A ++     L 
Sbjct: 561 MVMKYGVPASKLVYSNPVKEEKDIYYAKNKGVQITSADSIDELIKIQKIAPEMKILWRLS 620

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKD----KIESEIKNVNGLMFHNNC---ENKSFLC 174
           I          L                    +I+     ++G+ FH       + SF  
Sbjct: 621 IVEENPEQMATLFSGKFGDDVPNLDAAHKRFKQIQQMGIQLHGIHFHCGSAVQGSSSFGK 680

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
              + +   +    +  ++E + +GGG    +      +     K  ++    Q+  EPG
Sbjct: 681 AIDLAQECMRIGRLYGHKMELLDVGGGFPTGNIHENAIN--ALKKTQNDPLGYQVIAEPG 738

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY------ 288
                NT +L   ++        L    +    H  + +L    +    N   Y      
Sbjct: 739 RHFSANTCSLLFRIMTKRIKHGRLCYHVNESLYHSFNCILMDGISFENQNDQFYGVLNSD 798

Query: 289 -----------TAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                         + G +C   DI  +       +++GD +  + +  Y +  K+ FNG
Sbjct: 799 ESQNSQISEQSNVSIFGMTCDGADIIAKNMVVPNDLQVGDWLCMQGMGSYTVGPKSTFNG 858

Query: 337 IN 338
           + 
Sbjct: 859 MK 860


>gi|295840543|ref|ZP_06827476.1| lysine/ornithine decarboxylase [Streptomyces sp. SPB74]
 gi|197696621|gb|EDY43554.1| lysine/ornithine decarboxylase [Streptomyces sp. SPB74]
          Length = 396

 Score =  115 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 56/390 (14%), Positives = 112/390 (28%), Gaps = 53/390 (13%)

Query: 1   MIKTPY-----------YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLN 49
           M  TP             + D   +         +R+     +  A+K     G+   L 
Sbjct: 1   MTSTPLSGPEGPGDHDRLVYDLDGVRARYAEL--LRELPSAAVRFAMKAAPEDGVLRALA 58

Query: 50  QYMDGTTSSSLYEVMLG-HEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNK 106
               G  ++   E+       F  E   Y    K     A          + ++   L  
Sbjct: 59  AVGAGVDAAGPQELRQALRAGFPVEKIHYGNTIKSDADIAEAYALGVRLFVTDSREDLAA 118

Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFH 164
               A        + +    +           P     E  +   E+    +   GL  H
Sbjct: 119 LARHAPGARVFCRIAVEGGSALWGLKHKFGCAPD----EGVRLLREAAGLGLVPSGLSVH 174

Query: 165 NNCENKSFLCFSAMLKNIE---KEFGHFITQIEWISLGGGIHFTDK--------DYPVKD 213
              +      +    + +    +  G     ++ ++LGGG+             D P+  
Sbjct: 175 VGSQQMDPDAWRDACERLAAVLESLGAAGITLDHVNLGGGLPARGYLNADGQPLDPPLDK 234

Query: 214 FCQRLKEFSEKY------SVQIYLEPGEAIVTNTTTLNTTVLDISENIK------NLVIV 261
               L+E  E+        + + +EPG  +V +  T+   V+ ++          + + +
Sbjct: 235 IFATLREGVERLRSVHGGHLGVVMEPGRWLVADHGTIQARVVRLTRRHMPDGHVQHWLYL 294

Query: 262 DSSVEAHVP--DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEF----HFEKPVKIG 315
                  +   D L Y+             A+V G +C + D F            ++ G
Sbjct: 295 SCGKFNGLYEMDALQYRLRFPTASAAPRVPAVVAGPTCDSDDAFAHDRGHVRVPADLRSG 354

Query: 316 DRISFEDVAGYNINRKNW-FNGI-NMPTIA 343
           D +       Y ++     FNG   +P + 
Sbjct: 355 DPVEILSCGAYALSYTTRGFNGFSPLPVVL 384


>gi|71082910|ref|YP_265629.1| lysine/ornithine decarboxylase [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|71062023|gb|AAZ21026.1| Lysine/ornithine decarboxylase [Candidatus Pelagibacter ubique
           HTCC1062]
          Length = 392

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 47/349 (13%), Positives = 105/349 (30%), Gaps = 19/349 (5%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEV 63
           P Y I K+ + +              K+L A+K  +   +  T+ +        +S+ E+
Sbjct: 19  PIYCIRKKSIQSASTYFRNKFPG---KVLYAVKTNSHPEVLKTIVESGIENFDVASIQEI 75

Query: 64  MLGHEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                       +Y         I     N +   F+  ++    K        K     
Sbjct: 76  KDIRAISPDAKCSYMHTVKSRESIKEAYFNYNIKAFSLDTKDELIKIIEATNQAKDLELF 135

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLK 180
                 ++    D ++ F  L  +    +    +     GL FH   +    + ++  + 
Sbjct: 136 VRVAVSNEHAEIDLSKKFGVLTSEATGLLRLTKQYAKKIGLSFHVGSQCMHPISYAKGIG 195

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            I           ++I++GGG      +   +      +E  +  +     +  E +   
Sbjct: 196 EIGNIIKKTKIIPDYINIGGGFPAIYPNLVPQPLENYFEEIKKSLTNLELEKLPELLCEP 255

Query: 241 TTTLN----TTVLDISENIKNLVIVDSSVEAHVPDY----LLYQESATIYPNTGPYT--- 289
              +     +T++ ++   K  + ++      + D     ++Y                 
Sbjct: 256 GRAIVAESGSTIVRVNLRKKQKLYINDGTYGTLFDAGTPNMVYPSRLIKSSKIISKKLTA 315

Query: 290 AMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
               G +C + D   G F     +K  D I    +  Y +  +  FNG 
Sbjct: 316 FDFYGPTCDSMDYMKGPFLLPNNIKENDYIELGQLGAYGLTFRTQFNGF 364


>gi|241761768|ref|ZP_04759854.1| Orn/DAP/Arg decarboxylase 2 [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|241373682|gb|EER63242.1| Orn/DAP/Arg decarboxylase 2 [Zymomonas mobilis subsp. mobilis ATCC
           10988]
          Length = 393

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 53/349 (15%), Positives = 92/349 (26%), Gaps = 22/349 (6%)

Query: 19  DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSLYEVMLGHEKFGGETHAY 77
             A +  +    K + A+K   +  +  +L          +S  EV L        T  +
Sbjct: 30  RAARFFIEKFAGKTMYAVKANPSPALIRSLWDAGITQYDVASANEVRLVRHLLPEATLCF 89

Query: 78  NVAYKD---CEIDAVLSNCDTIIFNTVSQLNKF---KDKAQKLHKKIGLRINPSVSYSKF 131
               K                   +   +L+K     D A+ L   + LR++   S  K 
Sbjct: 90  MNPVKAEEVIREAYFEHGVRAFSLDNQDELDKILRATDYAKDLTLCVRLRVSSDHS--KL 147

Query: 132 ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFIT 191
            LA                      ++ G+ FH   +  S   +   +            
Sbjct: 148 SLASKFGIDPAQSASLLMAARQASDSL-GICFHVGSQAMSPQAYIQAMALARDAIVQAGV 206

Query: 192 QIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251
            ++ I +GGG      D   ++         E +         E        L+     +
Sbjct: 207 TVDVIDVGGGFPSIYPDLEPQNLENYFHSIHEAFESLPISYSAELWAEPGRALSAEYSSL 266

Query: 252 SENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG----------PYTAMVCGRSCLAGD 301
              ++     D  +       L                              G +C   D
Sbjct: 267 IVRVERRRGTDLYINDGAYGALFDAAHLDWRFPVKLLRAESNQARDINFSFYGPTCDDMD 326

Query: 302 IF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349
              G F     VK+GD I    +  Y    +  FNG   P++ V   D 
Sbjct: 327 YMAGPFPLPADVKVGDYIEIGMLGAYGNAMRTEFNGFT-PSMTVIADDQ 374


>gi|294937194|ref|XP_002782005.1| Ornithine decarboxylase, putative [Perkinsus marinus ATCC 50983]
 gi|239893218|gb|EER13800.1| Ornithine decarboxylase, putative [Perkinsus marinus ATCC 50983]
          Length = 460

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 48/414 (11%), Positives = 105/414 (25%), Gaps = 84/414 (20%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67
           L+D  +L   +     +     +    A+KC     +  TL         +++ E+ L  
Sbjct: 47  LLDLDQLERQMKKWKELLPR--IIPYYAMKCNPEPMLVKTLYHLGCRFDCATINEMKLVK 104

Query: 68  ---------------EKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDK 110
                          ++       Y          I A     + I+ ++  ++ K    
Sbjct: 105 SILSENMGGSNAHIIDEMMASHIVYANPNKLPSHLIGARDLGVECIVADSAFEIAKIAHY 164

Query: 111 AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170
                  + L    + +               +    ++ +     NV G+ FH      
Sbjct: 165 HPTAKLLLRLACVDNNAQCPMSSKFGASLGVAVNVLLEEAVN-HGLNVVGVSFHVGSGCS 223

Query: 171 SFLCFSAMLKNIEKEFG----HFITQIEWISLGGGI--------HFTDKDYPVKDFCQRL 218
                +  L +  + F      +  ++  + +GGG             K           
Sbjct: 224 DVHSITKALVDAREVFDAAASRYGMKLSILDIGGGFQGVDREGSPLNFKSMATVVNSLLD 283

Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ-- 276
             F +   V++  EPG     +   L T +   +  +    + +      + D       
Sbjct: 284 TLFPDPDEVRVIAEPGRFFACSPCALLTKIYSKNVVVSAAKLPEVKSCGGISDEDTMDGG 343

Query: 277 -----------------------------------ESATIYPNTGPY------------- 288
                                                  +      Y             
Sbjct: 344 SSSSASVDEGGAKNLSSLTRLYLNDGVYGSFNCILFDHQVVWPEALYAETEIRGIASVTN 403

Query: 289 -TAMVCGRSCLAGDIFGEFH-FEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
            T ++ G +C   D   +       ++IGD + + ++  Y       FNG + P
Sbjct: 404 PTQVLFGPTCDGFDTIMQGVTHLPEMEIGDHLLWRNMGAYTTAAATNFNGFDTP 457


>gi|254467051|ref|ZP_05080462.1| ornithine decarboxylase, putative [Rhodobacterales bacterium Y4I]
 gi|206687959|gb|EDZ48441.1| ornithine decarboxylase, putative [Rhodobacterales bacterium Y4I]
          Length = 383

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 42/358 (11%), Positives = 104/358 (29%), Gaps = 23/358 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGTTSSSLYEV 63
           P      + L                 +  A+K      +  + +   +     +S  E+
Sbjct: 23  PILYFSPRVLHEVARRFSQGFPG---LVTYAVKANPHPAVLSNLVAAGITAFDVASPAEM 79

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                        YN   +     A        +   + +S+L K     +     +   
Sbjct: 80  EAVRAASPDAVMHYNNPMRSEAEIATGIEHGVASWSVDELSELEKLDAVPRSCEVAVRFA 139

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +  + +   F       P   +    +   +     +    FH   + +  + +   +  
Sbjct: 140 LPVAGAAYDFGSKFGAAPEEAVELLKQVAAKGWTPAL---CFHPGTQCEDEMAWVEYVHA 196

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDK--DYPVKDFCQRLKEFSEK----YSVQIYLEPGE 235
            ++       +I  +++GGG           ++     +   +++        +  EPG 
Sbjct: 197 AKRIVDAAGVRIARLNVGGGFAANRDGVAPDLEKVFAAIGTAADQAFGAEKPTLICEPGR 256

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH--VPDYLLYQESATIYPNTG-----PY 288
           A+V+ + TL   +  + ++   + + D        + D  L      +  +         
Sbjct: 257 AMVSESFTLAARIKGMRKDGAVVFLNDGIYGGLVDIRDMGLPGRVEVVGSDGTHRSGVRK 316

Query: 289 TAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
             +V G +C + D   +          GD + F  +  Y+      FNG  +  +A  
Sbjct: 317 PRVVFGPTCDSLDRLPDGLPLPCDCVAGDYVLFPGLGAYSSAMSTQFNGYGLSDVATV 374


>gi|302517374|ref|ZP_07269716.1| lysine/ornithine decarboxylase [Streptomyces sp. SPB78]
 gi|302426269|gb|EFK98084.1| lysine/ornithine decarboxylase [Streptomyces sp. SPB78]
          Length = 396

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 53/372 (14%), Positives = 110/372 (29%), Gaps = 42/372 (11%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG- 66
           + D   +          R+     +  A+K     G+   L     G  ++   E+    
Sbjct: 19  VYDLDGIRARYAEL--CRELPSAAVRFAMKAAPDDGVLRALAAVGAGVDAAGPQELRQAL 76

Query: 67  HEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
              F  E+  Y    K     A          + ++   L      A        + +  
Sbjct: 77  RAGFPVESVHYGNTIKSDADIAEAYALGVRLFVTDSREDLAALARHAPGARVFCRIAVEG 136

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLKNI 182
             +           P     E  +   E+    +   GL  H   +      +    + +
Sbjct: 137 GSALWGLKHKFGCAPD----EGVRLLREAAGLGLVPSGLSVHVGSQQMDPDAWREACERL 192

Query: 183 E---KEFGHFITQIEWISLGGGIHFTDK--------DYPVKDFCQRLKEFSEKY------ 225
               +  G     ++ ++LGGG+             D P+      L+E  E+       
Sbjct: 193 AAVLEALGEAGITLDHVNLGGGLPARGYLSAEGEPLDPPLDKIFATLREGVERLRAVHGG 252

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIK------NLVIVDSSVEAHVP--DYLLYQE 277
            + + +EPG  +V +  T++  V+ ++          + + +       +   D L Y+ 
Sbjct: 253 HLDVVMEPGRWLVADHGTIHARVVRLTRRRMPDGVLQHWLYLSCGKFNGLYEMDALQYRL 312

Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEF----HFEKPVKIGDRISFEDVAGYNINRKNW 333
                       A+V G +C + D F            ++ GD +       Y ++    
Sbjct: 313 RFPTRSAAPRVPAVVAGPTCDSDDAFAHDRGHVRVPADLRSGDPVEILSCGAYALSYTTR 372

Query: 334 -FNGI-NMPTIA 343
            FNG   +P + 
Sbjct: 373 GFNGFSPLPVVL 384


>gi|197295061|ref|YP_002153602.1| putative pyridoxal-dependent decarboxylase [Burkholderia
           cenocepacia J2315]
 gi|195944540|emb|CAR57143.1| putative pyridoxal-dependent decarboxylase [Burkholderia
           cenocepacia J2315]
          Length = 391

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 54/378 (14%), Positives = 111/378 (29%), Gaps = 40/378 (10%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGTTSSSL 60
           ++TP Y+ + +  +    +        G +L+++LK      M     + Y DG   +S 
Sbjct: 19  LRTPCYVYEPEVAIARYRSLK---ARLGTRLIVSLKANPNQDMLARCAHAYEDGVELASR 75

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL------ 114
            E+     +     +  N +  +  + A L++    + +    + +F   A++       
Sbjct: 76  GELDAVIGRIKTARYLNNPSMDEMFMRAGLASRCHFVLDNPDAVARFVPLAREAAAGGST 135

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN---VNGLMFHNNCEN-- 169
              + LR+N          A  +  F     +  D + +       V GL   +   +  
Sbjct: 136 PGAVLLRVNAGALAGVHARAQWHDHFGMTPNEAHDAVRTLAAAGLPVAGLHVFSGPHSFI 195

Query: 170 -------KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP-VKDFCQRLKEF 221
                   + +    +              +  +SLGGG           + +   L   
Sbjct: 196 RQDPTQPDTLVLPERLAALARDLAPANGAPLGSLSLGGGFADDHPGDAAFERYAAALAPL 255

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-----------VP 270
           + +Y   +  E G AI  +     T V+ +       + V     +H             
Sbjct: 256 AGRY--SLAHESGRAIFADAGVFATRVVAVKTWQDRTIAVCDGGLSHAFLLAQTESVMRR 313

Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY--NI 328
                       P +     +  G +C   D+ G      P ++GD   FE    Y    
Sbjct: 314 LAAPSLVRRMPAPPSRGVPTLYVGSTCSRADVIGRDDAGAPPQVGDIAVFERCGAYHRTY 373

Query: 329 NRKNWFNGINMPTIAVKN 346
           +    F            
Sbjct: 374 SMA-HFLSHE-AAHVYVR 389


>gi|218263199|ref|ZP_03477397.1| hypothetical protein PRABACTJOHN_03080 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222875|gb|EEC95525.1| hypothetical protein PRABACTJOHN_03080 [Parabacteroides johnsonii
           DSM 18315]
          Length = 240

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 56/187 (29%), Gaps = 12/187 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++TP+Y  D + L   L+         G     A+K  A   +   + +Y  G    S  
Sbjct: 37  LETPFYFYDIKLLKETLNMVKTEAGKYGYHAHYAVKANANPRILSVIAEYGLGADCVSGG 96

Query: 62  EVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN--TVSQLNKFKDK--AQKLHK 116
           E+       F      Y    K      +  + D   FN  + ++L    +   A+    
Sbjct: 97  EIQAALDAGFPACKIVYAGVGKADWEINLGLDNDIFCFNVESAAELEILDELAAAKNKVA 156

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI-------ESEIKNVNGLMFHNNCEN 169
            I LRINP V              ++ G                E   + G+  H   + 
Sbjct: 157 PIALRINPEVDAHTHAKITTGMKENKFGINLSQLGQVLDLVSHLEHIKLIGIHCHIGSQI 216

Query: 170 KSFLCFS 176
                F 
Sbjct: 217 TDMAAFR 223


>gi|328542930|ref|YP_004303039.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein
           [polymorphum gilvum SL003B-26A1]
 gi|326412676|gb|ADZ69739.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein
           [Polymorphum gilvum SL003B-26A1]
          Length = 406

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 49/362 (13%), Positives = 101/362 (27%), Gaps = 32/362 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSSLYEV 63
           P Y    + L  +      +      K   A+K      +  TL Q   D    +S  E 
Sbjct: 19  PVYCFRPKVLAEDARRFAGLFPG---KTAYAVKTNGEPFVLATLAQAGIDCFDVASPAEF 75

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDA---VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG- 119
                        Y    K               T+  +   ++ K     + L    G 
Sbjct: 76  AAVRGVAPSAEMLYMHPVKAQSHIRLALETYRIRTLSLDHEDEVAKILRVVRALDIDPGD 135

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN--VNGLMFHNNCENKSFLCFSA 177
           + +   ++       + ++ F        + ++   +     GL FH   + +    +  
Sbjct: 136 ITLFVRIATKGQAAYELSKKFGAAPAHAVELLQRIDRIGFRCGLCFHVGSQIEDPQTYER 195

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF---------CQRLKEFSEKYSVQ 228
            L + +         I  + +GGG        P +             +L++    +   
Sbjct: 196 ALASADWIRSRAGVPIVALDVGGGFPAVYGHDPRRRTPEMPSLEELMAQLRQDISDWGFD 255

Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP- 287
                 E          + V+ +       + ++  + A + D    + +        P 
Sbjct: 256 TLPLVAEPGRVIVARSISLVVRVLLKKGRRLYINDGIWASLSDSWTGKITLPARFIPDPA 315

Query: 288 -----------YTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFN 335
                          VCG +C + DI     +    V  GD I    +  Y+++ +  FN
Sbjct: 316 RKRRAGNPDEIVPFKVCGATCDSVDILSRPFWLPETVDTGDWIEIGHIGAYSLSLRTHFN 375

Query: 336 GI 337
           G 
Sbjct: 376 GF 377


>gi|110634377|ref|YP_674585.1| Orn/DAP/Arg decarboxylase 2 [Mesorhizobium sp. BNC1]
 gi|110285361|gb|ABG63420.1| Orn/DAP/Arg decarboxylase 2 [Chelativorans sp. BNC1]
          Length = 406

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 46/361 (12%), Positives = 101/361 (27%), Gaps = 32/361 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVM 64
            Y    + L  +    + +      K   A+K      +  TL +        +S  E  
Sbjct: 20  VYCFRPEVLKADARGFMGLFPG---KTAYAVKTNGEPLVLKTLAEAGVTAFDVASPAEFA 76

Query: 65  LGHEKFGGETHAYNV---AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG-L 120
                       Y     A  D  +         I  +   ++ K     + L    G L
Sbjct: 77  AVRAVAPSAEMLYMHPVKAQADIRLALEGYGIRKIAVDHEDEVTKLTRVVRALDIDPGRL 136

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN--VNGLMFHNNCENKSFLCFSAM 178
            +   +        + ++ F     +    ++   +N    G+ FH   + +    +   
Sbjct: 137 TVFVRIQTKGQATYELSKKFGAGPAQAVQLLQRLHRNGYKVGICFHVGSQIEEPYVYERA 196

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---------LKEFSEKYSVQI 229
           L + +   G     +  + +GGG        P +   +          ++    ++    
Sbjct: 197 LASADWVRGRAGVPLAALDIGGGFPAEYGHDPNRRKSEMPSLEELMARVRADIAEWGFDT 256

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-- 287
                E          + ++ +       + ++  + A + D    + +        P  
Sbjct: 257 LPLVAEPGRVIVARAFSLIVRVLLRKGRRLYINDGIWASLSDSWTGKITLPARFIPDPAI 316

Query: 288 ----------YTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNG 336
                         VCG +C + DI     +    V  GD I    +  Y++  +  FNG
Sbjct: 317 RSRSGSAENIVPFRVCGATCDSVDILSRPFWLPETVDTGDWIEIGHIGAYSMALRTRFNG 376

Query: 337 I 337
            
Sbjct: 377 F 377


>gi|118101782|ref|XP_425787.2| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 458

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 48/360 (13%), Positives = 111/360 (30%), Gaps = 38/360 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++       +++    VK    +KC ++ G+   L +   G   ++  E+  
Sbjct: 39  FFVADLGDIVK--KHLHFLKALPRVKPYFPVKCNSSGGVIRLLAELGAGFACANKTEIAE 96

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                   +   Y+   K               + F+ + +L+K      +    +G+  
Sbjct: 97  VQSIGVPADKIFYSSPCKXXXXXXXXXXXXVQLMTFDNLVELSKVARSHPQARMLLGIAA 156

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           + S S    +         R      +  + +   V G+ FH    +     F+  +   
Sbjct: 157 DSSPSAHPSMTFGATLKSCR---CLLESAKEQDVEVVGISFHLGRHSLEPQVFAQAVAEA 213

Query: 183 EKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRL------KEFSEKYSVQIYLEP 233
           +  F        ++  + +GGG   T+      +    +        F E   V+I   P
Sbjct: 214 QLAFDMGAELGYRMHLLDIGGGFPGTEDTRAQFEEIAAVINSALDMYFPEGCGVEIIATP 273

Query: 234 GEAIVTNTTTLNTTVLDISE---------------NIKNLVIVDSSVEAHVPDYLLYQES 278
           G   VT+  T   ++    +                   +  + + +       L     
Sbjct: 274 GRYYVTSAFTFAASITSKEDVPVEQPGSDGEESGSKRSFVYHLSNGIYGTFSCVLFDGPC 333

Query: 279 ATIYPNTGPYTAMV------CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                +  P +  +       G    A D   +      ++ GD + F+D+  Y+I   +
Sbjct: 334 PKPLLHKKPCSEQLLCSSSLRGPLGHAEDQITDDVELPELQDGDWLIFQDMGAYSIATSS 393


>gi|159475475|ref|XP_001695844.1| arginine/ornithine decarboxylase [Chlamydomonas reinhardtii]
 gi|158275404|gb|EDP01181.1| arginine/ornithine decarboxylase [Chlamydomonas reinhardtii]
          Length = 391

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 42/369 (11%), Positives = 88/369 (23%), Gaps = 47/369 (12%)

Query: 22  LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAY-NV 79
                  G     A+K      +   + +   G   +S  E+       F  +   + + 
Sbjct: 6   QRAPFPPGTLHAFAIKANPVGRLLQIMREAGLGAEVASHGELRQALACGFVPDRVVFDSP 65

Query: 80  AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP---SVSYSKFILADP 136
                E+   L     +  + + +L++              R       V          
Sbjct: 66  IKTPAELRFALRAGVRLNLDNLQELDRLDKTVCFKCSPAPCRSRCAGPQVGEGSIAALST 125

Query: 137 NRPFSRLGEKCKD------KIESEIKNVNGLMFHNNC-----ENKSFLCFSAMLKNIEKE 185
               S+ G    +              +N L  H        E       +      E++
Sbjct: 126 AGRVSKFGIPLLECRAQLLAAFRAHPWLNALHLHVGSQGVPLELTVEGVAAVAALAAEQQ 185

Query: 186 FGHFITQIEWISLGGGIHFTDKDYP---VKDFCQRLKEF---SEKYSVQIYLEPGEAIVT 239
                 ++  + +GGG+              + + L++        +  +  E G  +V 
Sbjct: 186 EQRRRRRVLALDIGGGLPVMYGTDDLSVFDRYARLLQQRVPSLFPTATTLVTEFGRCLVA 245

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY----------- 288
                   V    +     V+V       +   +    +  +                  
Sbjct: 246 KAAFAAGRVEYTKQCGGRRVVVSGLGGDLLLRAVYLPHTWPVRVELCDAAGQPKQPPARG 305

Query: 289 --------------TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                            V G  C  GD   E         GD +   DV  Y ++  + +
Sbjct: 306 GAAYGGGGDDGDVAPTDVVGPLCFQGDKLAEAAPLPAAAPGDWVLVPDVGAYTLSMHSRY 365

Query: 335 NGINMPTIA 343
           N    P + 
Sbjct: 366 NSRCSPPVW 374


>gi|40063551|gb|AAR38340.1| decarboxylase, pyridoxal-dependent [uncultured marine bacterium
           582]
          Length = 375

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 49/358 (13%), Positives = 102/358 (28%), Gaps = 21/358 (5%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSLYEV 63
           P      + L  +              +  A+K  A+  + D L          +S  E+
Sbjct: 23  PVLYFSPKVLHESYQRF---LLGFDGLVTYAVKANASSLVLDNLASAGLTTFDVASPAEM 79

Query: 64  MLGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                        Y+   +      +A      +   ++ ++L+K    A      + L 
Sbjct: 80  QTVRAALPSAVLHYHNPVRSLIEIAEAKRFGVQSWAVDSQTELDKLGALATGTEIAVRLH 139

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           I  + +   F       P   +    + K      ++    FH   +      +   ++ 
Sbjct: 140 IPVAGAAYDFGEKFGAGPEQVVALLRRVKQRGLTPSLT---FHPGTQCTDPAAWVRYIEV 196

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYP------VKDFCQRLKEFSEKYSVQIYLEPGE 235
                      +E +++GGG                      +K    + S  +  EPG 
Sbjct: 197 AHAVSQRAEVDLERVNVGGGFAVWRDRQAPDLERVFTQISDCVKALFGEKSPALVCEPGR 256

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVE-AHVPDYLLYQESATIYPNTG----PYTA 290
           A+V +  TL T +  +       +        +   D  + Q        +         
Sbjct: 257 AMVASAFTLATQIKALRGLRTVFLNDGVYGLLSEFRDLGVSQRYQAWRAGSKLAGPSAAY 316

Query: 291 MVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
            V G +C + D           ++ GD + F ++  Y+++    FNG     I     
Sbjct: 317 TVFGPTCDSIDKLPSPLHLPKSIQEGDYLLFSEIGAYSLSLATAFNGYGGCEIVAVTD 374


>gi|57242753|ref|NP_001008729.1| ornithine decarboxylase antizyme inhibitor [Gallus gallus]
          Length = 450

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 55/373 (14%), Positives = 115/373 (30%), Gaps = 33/373 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D  KL+        +     +K    ++C +  G+ + L     G   SS  E+ L
Sbjct: 40  FYVGDLGKLVKKNIQWQNVMAP--IKPFYTVRCNSTPGVLEILGTLGIGFACSSKSEMAL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        +     I    S +   K      + K+ L I  
Sbjct: 98  VQGLGISPENIIYTNPCKQASQIKYAAKAGINIMTCDSDIELKKIARNHPNAKLLLHIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
               +   +        +      +  +     + G+ FH +   K    +   + +   
Sbjct: 158 EDITADEEMNMKFGTTLKNCRHLMECAKEFGVQIVGVKFHVSGSCKELQTYIHAISDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
            F     F  ++  + +GGG   ++   ++            F ++  +Q+  EPG   V
Sbjct: 218 VFDMAEEFGFKMNMLDIGGGFTGSELQLEEVNHVIRPLLDVYFPKESGIQVIAEPGCYYV 277

Query: 239 TNTTTLNTTVLD---ISENIKNLVIVDSSVEAHVPDYLLY-------------------- 275
           ++  TL   V+    +  +      V+ +     P +  Y                    
Sbjct: 278 SSAFTLAVNVIAKKAVDCDKLLPSGVEQARNDDEPVFTYYINDGVYGSFASKLSEKLYTN 337

Query: 276 -QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
            +       +   + + + G SC   D   E      + +GD + F+++    +  ++ F
Sbjct: 338 PEVHKKYKEDEPLFASSLWGPSCDELDQIVENCLLPELSVGDWLIFDNMGSGTLGEQSTF 397

Query: 335 NGINMPTIAVKNV 347
           N    P I     
Sbjct: 398 NDYQRPLIYYMMS 410


>gi|223648116|gb|ACN10816.1| Antizyme inhibitor 1 [Salmo salar]
          Length = 449

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 50/380 (13%), Positives = 116/380 (30%), Gaps = 36/380 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   L+               +   A++  ++  + + L     G   +S YE+ L
Sbjct: 40  FFVADLGVLMRQHVRWRTHMPQM--RPFYAVQANSSLAVIEILAALGTGFICTSKYELEL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                   E   Y+   K       A  +  D ++ +  ++L K          K+ L++
Sbjct: 98  VQGYGVPSEDIIYSGVCKQLSQIKYAAKNGIDFLVCDNEAELRKIAR--CHPRAKLLLQV 155

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
               S     +        +      +  + +   V G+ FH          +S  + + 
Sbjct: 156 ATEASSEGDEMGMAFGSKLKDCRHLLESAKEQGLQVVGVRFHIPSSCDDPQAYSHAVSDA 215

Query: 183 EKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC--QRLKEFSEKYSVQIYL-EPGEA 236
              F         +  + +GGG + ++      +      L  +    S    + EPG  
Sbjct: 216 RCVFDMGEDIGFSMTLLDIGGGFNGSETQLKQINSAVRPLLDLYFPASSGVSIMAEPGSY 275

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAH--------VPDYLLYQESATIYPNTGPY 288
            V+++ TL   ++      ++L         +        + D +    ++ +  N  P 
Sbjct: 276 YVSSSFTLAVNIIAKEVGARDLHGNHDEPSPNDEPEFLYYMNDGVYGSFTSKLADNVIPA 335

Query: 289 TA--------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
            A               + G S    D   +      + +GD + F +   Y++   + F
Sbjct: 336 PALPKSGVSEDPVFASSLWGPSGDELDQVVDQCLLPELSVGDWLIFNNAGAYSLGPPSTF 395

Query: 335 NGINMPTIAV-KNVDGTIKA 353
                P +    +     + 
Sbjct: 396 TESPRPPVYYTISTGDWFEM 415


>gi|160941972|ref|ZP_02089294.1| hypothetical protein CLOBOL_06863 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435113|gb|EDP12880.1| hypothetical protein CLOBOL_06863 [Clostridium bolteae ATCC
           BAA-613]
          Length = 410

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 53/381 (13%), Positives = 115/381 (30%), Gaps = 37/381 (9%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP Y+ D    ++ +     I     V +  A+K                G    S  E 
Sbjct: 15  TPCYIFDLDVFISRIRRMEQILGK-QVNIYYAMKANPFLTAAAAQAAG--GLEVCSPGEY 71

Query: 64  MLGH-EKFGGETHAYNVAYKDCEIDAVLS---NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            +    +   +    +   K+      +       T    +++QL   +  A    +   
Sbjct: 72  AICRRARVPAQKIVLSGVNKEESHIRSVMAEQGAGTYTAESLNQLRLLEACAGAAGRTGV 131

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
             +    S ++F +         +    +++      ++ GL +++  + K        L
Sbjct: 132 RVLLRLTSGNQFGMD-----EEDILTSIRNRDSYPHLDLAGLQYYSGTQKKGMEKIEKEL 186

Query: 180 ----KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK------YSVQI 229
                 ++    H   +   +  G G      +   +   + L +  +K      +   I
Sbjct: 187 VKLDSFMDFVREHLDFEFRELEYGPGFQIPYFEGQEQADEEILLQEFKKALDSLNFKGII 246

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------DYLLYQESATI 281
           +LE G  +     +  T V D+  +      +      HV             Y+     
Sbjct: 247 FLEAGRFLAAPCGSYLTRVADVKRSQGQNYCIVDGGINHVNYYGQTMAMKVPAYRYIPQD 306

Query: 282 YPNTGPYT------AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWF 334
            P   P +        VCG  C +GDI  +      +  GD + F+ +  Y++      F
Sbjct: 307 NPARPPASQTSGDRWTVCGSLCTSGDILVKNLPLDGLMTGDLLVFDRIGAYSVTEGIYLF 366

Query: 335 NGINMPTIAVKNVDGTIKAIR 355
               +P +     +  +  +R
Sbjct: 367 LSRKLPVVLTCTQEHGLSLVR 387


>gi|323451542|gb|EGB07419.1| hypothetical protein AURANDRAFT_27655 [Aureococcus anophagefferens]
          Length = 565

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 60/382 (15%), Positives = 99/382 (25%), Gaps = 50/382 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y++D        D          V+   A+KCF   G+   L     G   +S  E  
Sbjct: 143 PFYVVDVGAAERLYDAWAAALPR--VRPHYAVKCFPDAGLCRALAAKGCGFDCASEAECR 200

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
           L                     D        + + T    ++    A  L       +  
Sbjct: 201 LVFACGATPRDVVFANPCKRPSDVNFLAASGVPWTTFDCCDELAKLAGLLPGATRAVLRL 260

Query: 125 SVSYSKFILADPNRPFSRLGE--KCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
                   L    +  +   E         +    V G+ FH     +S   F+A +   
Sbjct: 261 RCDDPTSRLPFGPKYGALEDEVPGLLAAARAAGVAVAGVSFHVGSGARSPAAFAAAIAAA 320

Query: 183 EKEFGHF----ITQIEWISLGGGI---------------HFTDKDYPVKDFCQRLKEFSE 223
            + F           + + +GGG                        V          S+
Sbjct: 321 RRAFDANAAAGGAPFDVLDIGGGFCGGFDASGTAAVSASGDATVAAAVNAALDLSFPASD 380

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA--HVPDYLLYQESATI 281
              + +  EPG        +L   V+      +  V      EA   + D +    +A I
Sbjct: 381 FPGLDVIAEPGRYFAEAAASLCCRVVGERHRSRADVGAPPEPEAQYWITDGVYGAFNAII 440

Query: 282 YPNTGPYTA------------------------MVCGRSCLAGD-IFGEFHFEKPVKIGD 316
           Y    P+                           V G +C + D +F       P++  D
Sbjct: 441 YDGWLPHAVVVDDPRRAHGAGDAGGRGAGAALTTVFGPTCDSLDVVFSRVRNAPPLRRDD 500

Query: 317 RISFEDVAGYNINRKNWFNGIN 338
            + F     Y       FNGI 
Sbjct: 501 WLLFPCCGAYTSAGAADFNGIP 522


>gi|291408851|ref|XP_002720748.1| PREDICTED: ODC antizyme inhibitor-2 [Oryctolagus cuniculus]
          Length = 460

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 49/358 (13%), Positives = 110/358 (30%), Gaps = 33/358 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++       +++    V+    ++C ++ G+   L +   G + ++  E+ L
Sbjct: 41  FFVADLGAVVR--KHLCFLKCLPRVRPFYVVRCNSSPGVLKVLAELGLGFSCANKAEMEL 98

Query: 66  G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             H         Y    K        +     + +  +++   K        K+ L +  
Sbjct: 99  VQHIGVPTSKIIYANPCKQIAQIKYAAKHGVRLLSFDNEMELAKVAKSHPSTKLVLCVAT 158

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             SYS   L+              +  +     V G+ FH +        ++  + +   
Sbjct: 159 DDSYSTSHLSLKFGAALNSCRHLLENAKKSHVEVVGVSFHISSGCPDPRAYAQSIADARL 218

Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPGE 235
            F        ++  + LGGG    +      +    +        F E   V I  E G 
Sbjct: 219 VFEMGSELGHRMHILDLGGGFPGIEGAKVRFEEVASVINSALDLYFPEGCGVDILAELGR 278

Query: 236 AIVTNTTTLNTTVLDIS---------------ENIKNLVIVDSSVEAHVPDYLLYQESAT 280
             VT+  T+  +++                       +  +   V       L      T
Sbjct: 279 YYVTSAFTVAVSIIAKKEVLLDQPGREEENGSTPKTIMYHLAEGVYGIFNSVLFDSVCPT 338

Query: 281 IYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                 P      Y++ + G +    D   E  +   + +GD + F+++  Y I   +
Sbjct: 339 PILQKKPSAEQPLYSSSLWGPTAEGCDCVAEGLWLPQLHVGDWLVFDNMGAYTIGTGS 396


>gi|312115026|ref|YP_004012622.1| Orn/DAP/Arg decarboxylase 2 [Rhodomicrobium vannielii ATCC 17100]
 gi|311220155|gb|ADP71523.1| Orn/DAP/Arg decarboxylase 2 [Rhodomicrobium vannielii ATCC 17100]
          Length = 394

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 48/342 (14%), Positives = 97/342 (28%), Gaps = 26/342 (7%)

Query: 16  NNLDTALYIRKNAGVKLLLALKCFAAW-GMFDTLNQYMDGTTSSSLYEVMLGHEKFGGET 74
                A +   N   + L A+K   +   +    N  +     +S  EV    +  G   
Sbjct: 27  AAASAARWFLDNFPGETLYAVKANDSPKAVAALFNAGIRHFDVASATEVRAIADLPGAVM 86

Query: 75  HAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFI 132
           H  +       I          T   ++ S+L+K             +      S     
Sbjct: 87  HIMHPVKSRKFIAEAYFDYGVRTFSLDSDSELDKILAVTGNAKDLTLVVRVACPSTYS-- 144

Query: 133 LADPNRPFSRLGEKCKDK-----IESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG 187
                    + G    +         +  N+ G+ FH   +    + +  +L+ + ++  
Sbjct: 145 ---EISLEGKFGAPWSEAPGLIRRARQNSNMLGVSFHAGSQMMCPVGYGQVLRTVSQQIV 201

Query: 188 HFITQIEWISLGGGIHFTDKDYPVKDFCQR-------LKEFSEKYSVQIYLEPGEAIVTN 240
              T ++ + +GGG                         + +  Y+ Q++ EPG A+V  
Sbjct: 202 RAATLVDIVDVGGGFPSRYPGMEPPALDAYMDEIRGAFDKMAVGYTCQLWCEPGRALVAE 261

Query: 241 TTTLNTTVLDISENIKNLV---IVDSSVEAHVPDYLLYQESATI--YPNTGPYTAMVCGR 295
             ++   V     +   +           AH       +  A+               G 
Sbjct: 262 AESVIVRVDARRGDTLYVNDGAFGTLYDAAHCKWVFPTRAYASDGEPMRGREKAFDFYGP 321

Query: 296 SCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNG 336
           +C + D           +  GD I   ++  Y     + FNG
Sbjct: 322 TCDSADYLAGPFMLPESIDEGDFIEIGNIGAYGRVMASHFNG 363


>gi|152974010|ref|YP_001373527.1| Orn/DAP/Arg decarboxylase 2 [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152022762|gb|ABS20532.1| Orn/DAP/Arg decarboxylase 2 [Bacillus cytotoxicus NVH 391-98]
          Length = 434

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 62/385 (16%), Positives = 117/385 (30%), Gaps = 34/385 (8%)

Query: 8   LIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +   Q++ +N  +           V +  ALKC       + L +        S  E+ +
Sbjct: 46  IYFDQRIKDNYYSIYNAFNKYFKNVSIHFALKCNYIPACIEALFKVGCSVEVMSSIELQI 105

Query: 66  GHE-KFGGETHAYNV-AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGLR 121
             +  F       N       E+   L N   I  + ++ L +    +  L     IGLR
Sbjct: 106 ALQNGFKRNQIVCNGLGKTKEELLQELENSKLIFIDNINDLERINSLSLDLGKKIPIGLR 165

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCENKSFL 173
           + P++  S        +P S+LG      +E   +        N+ G+ FH     K   
Sbjct: 166 VLPNIKSSSHE-EVMIKPSSKLGMDINTAMEFLKQSKETNSNLNIIGIQFHLMSHLKDCS 224

Query: 174 CFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPVKDF------CQRLKEFSE 223
            +   L +IE              ++I+LGGG                       K  + 
Sbjct: 225 LYKEYLSSIESFLENVYKELNYSFQYINLGGGFETRFIMENNNIDISSLAKIAYDKLKNL 284

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
            Y  ++ +EPG  I+ +   +  +++   ++      +       +      +     Y 
Sbjct: 285 PYDYELIVEPGRYIMADAAVILASIISEKKSADVNWKITDIGSNILIPVPNIEYYTIPYK 344

Query: 284 ----NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
               N       V   +C A     +        + ++I   +   Y       +    +
Sbjct: 345 LNDGNQPWERYNVGDATC-APSHLCKDVELPSQLVENKIIVLNCGAYTSVYSELW-AFKL 402

Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
           P I     D        FSYN +  
Sbjct: 403 PEIYYLKDDKIHNI---FSYNQFRQ 424


>gi|260427217|ref|ZP_05781196.1| Orn/DAP/Arg decarboxylase 2 [Citreicella sp. SE45]
 gi|260421709|gb|EEX14960.1| Orn/DAP/Arg decarboxylase 2 [Citreicella sp. SE45]
          Length = 375

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 48/359 (13%), Positives = 106/359 (29%), Gaps = 34/359 (9%)

Query: 11  KQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFD-TLNQYMDGTTSSSLYEVMLGHEK 69
             ++                 +  A+K   A  M D  +   +     +S  E+ L    
Sbjct: 32  LAQVTERFRR------GFPGLVTYAVKANPAPEMLDGLVAAGIRAFDVASPAEMALVRAH 85

Query: 70  FGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVS 127
                  Y+   +            C +   + + +L K     +     + L++  + +
Sbjct: 86  CPDAVLHYHNPVRSEAEIDAGLAHGCVSWSVDRMRELEKLSRLPKGTEIAVRLKLPVTGA 145

Query: 128 YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG 187
              F          RL ++  +++ +E+  V  L FH   + ++   ++  ++   +   
Sbjct: 146 AYDFG--AKFGAEPRLAQELLERV-AEMGFVPSLTFHPGTQCRTPEPWARYIQAAAEIAR 202

Query: 188 HFITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTT 242
                +  +++GGG      +       +          +     ++  EPG  +     
Sbjct: 203 AAGVTLHRLNVGGGFPSDRGEGHPDLDAIFRTIAETTRAAFDVPPRLVCEPGRGLCAEAF 262

Query: 243 TLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE----SATIYPNTGPYTAMVC-GRSC 297
            L   V  + +    L        A   D          +    P  G +   +  G +C
Sbjct: 263 LLALRVKAVEDAAVFLNDGIYGGMAEWRDLGPMGRLRVVTPEGLPRGGAFRGRIVFGPTC 322

Query: 298 LAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
            + D   +       ++  D I FE +  Y+      FNG            G  + IR
Sbjct: 323 DSLDRLPDPVALPEGIREDDFIVFEGMGAYSRALVTGFNGY-----------GARRIIR 370


>gi|53133950|emb|CAG32289.1| hypothetical protein RCJMB04_22c14 [Gallus gallus]
          Length = 407

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 53/368 (14%), Positives = 112/368 (30%), Gaps = 33/368 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D  KL+        +     +K    ++C +  G+ + L     G   SS  E+ L
Sbjct: 40  FYVGDLGKLVKKNIQWQNVMAP--IKPFYTVRCNSTPGVLEILGTLGIGFACSSKSEMAL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        +     I    S +   K      + K+ L I  
Sbjct: 98  VQGLGISPENIIYTNPCKQASQIKYAAKAGINIMTCDSDIELKKIARNHPNAKLLLHIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
               +   +        +      +  +     + G+ FH +   K    +   + +   
Sbjct: 158 EDITADEEMNMKFGTTLKNCRHLMECAKEFGVQIVGVKFHVSGSCKELQTYIHAISDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
            F     F  ++  + +GGG   ++   ++            F ++  +Q+  EPG   V
Sbjct: 218 VFDMAEEFGFKMNMLDIGGGFTGSELQLEEVNHVIRPLLDVYFPKESGIQVIAEPGCYYV 277

Query: 239 TNTTTLNTTVLDISENIKN----------LVIVDSSVEAHVPDYLLYQE----------- 277
           ++  TL   V+       +              +     ++ D +               
Sbjct: 278 SSAFTLAVNVIAKKAVDCDKLLPSGVEQARNDDEQVFTYYINDGVYGSFASKLSEKLYTN 337

Query: 278 ---SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                    +   + + + G SC   D   E      + +GD + F+++    +  ++ F
Sbjct: 338 PEVHKKYKEDEPLFASSLWGPSCDELDQIVENCLLPELSVGDWLIFDNMGSGTLGEQSTF 397

Query: 335 NGINMPTI 342
           N    P I
Sbjct: 398 NDYQRPLI 405


>gi|86138608|ref|ZP_01057181.1| Putative Ornithine decarboxylase [Roseobacter sp. MED193]
 gi|85824668|gb|EAQ44870.1| Putative Ornithine decarboxylase [Roseobacter sp. MED193]
          Length = 383

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 46/358 (12%), Positives = 106/358 (29%), Gaps = 23/358 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGTTSSSLYEV 63
           P      + L    +            +  A+K      +  + +   +     +S  E+
Sbjct: 23  PILYFSPRVLHQVAERFQAGFDG---LVTYAVKANPHQAVLSNLVAAGISAFDVASPAEM 79

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                        YN   +           D  +   +  S+L+K  +  +     +   
Sbjct: 80  AAVRLASPDAVMHYNNPVRSMAEVDAGIAHDVASWSVDECSELDKLVEVPRDKEIAVRFA 139

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +    +   F       P   +    + + E     +    FH   + +    +   +  
Sbjct: 140 LPVEGAAYDFGSKFGAAPQEAIALLKRVEAEGWTPAL---CFHPGTQCEDPRAWVEYIHA 196

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDK--DYPVKDFCQRLKEF----SEKYSVQIYLEPGE 235
            ++        I  +++GGG           ++     ++E           Q+  EPG 
Sbjct: 197 AKRIVDAAQVPIARLNVGGGFAANRDGVAPDLERVFAAIQEAVVAAFGADHPQLICEPGR 256

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH--VPDYLLYQESATI-----YPNTGPY 288
           A+V+ + TL   +  + +  + + + D        + D  L      +     +   G  
Sbjct: 257 AMVSESFTLAARIKGMRKGGEMVFLNDGIYGGLVDIRDMGLPGRVEVVGADGRHREAGRS 316

Query: 289 TAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
             +V G +C + D   +        + GD + F  +  Y+      FNG  +  +A  
Sbjct: 317 PRVVFGPTCDSLDRLPDGLPLPDDTQAGDYVLFPGLGAYSSAMSTQFNGYGLSDVATV 374


>gi|318058910|ref|ZP_07977633.1| lysine/ornithine decarboxylase [Streptomyces sp. SA3_actG]
          Length = 378

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 52/369 (14%), Positives = 108/369 (29%), Gaps = 38/369 (10%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG-H 67
            D   +          R+     +  A+K     G+   L     G  ++   E+     
Sbjct: 2   YDLDGIRARYAEL--CRELPSAAVRFAMKAAPDDGVLRALAAVGAGVDAAGPQELRQALR 59

Query: 68  EKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPS 125
             F  E+  Y    K     A          + ++   L      A        + +   
Sbjct: 60  AGFPVESVHYGNTIKSDADIAEAYALGVRLFVTDSREDLAALARHAPGARVFCRIAVEGG 119

Query: 126 VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE-- 183
            +           P    G +   +        +GL  H   +      +    + +   
Sbjct: 120 SALWGLKHKFGCAPDE--GVRLLREAVDLGLVPSGLSVHVGSQQMDPDAWREACERLAAV 177

Query: 184 -KEFGHFITQIEWISLGGGIHFTDK--------DYPVKDFCQRLKEFSEKY------SVQ 228
            +  G     ++ ++LGGG+             D P+      L+E  E+        + 
Sbjct: 178 LEALGEAGITLDHVNLGGGLPARGYLSAAGEPLDPPLDKIFATLREGVERLRAVHGGHLD 237

Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIK------NLVIVDSSVEAHVP--DYLLYQESAT 280
           + +EPG  +V +  T++  V+ ++          + + +       +   D L Y+    
Sbjct: 238 VVMEPGRWLVADHGTIHARVVRLTRRRMPDGVLQHWLYLSCGKFNGLYEMDALQYRLRFP 297

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEF----HFEKPVKIGDRISFEDVAGYNINRKNW-FN 335
                    A+V G +C + D F            ++ GD +       Y ++     FN
Sbjct: 298 TRSAAPRVPAVVAGPTCDSDDAFAHDRGHVRVPADLRSGDPVEILSCGAYALSYTTRGFN 357

Query: 336 GI-NMPTIA 343
           G   +P + 
Sbjct: 358 GFSPLPVVL 366


>gi|77462538|ref|YP_352042.1| putative ornithine decarboxylase [Rhodobacter sphaeroides 2.4.1]
 gi|332557423|ref|ZP_08411745.1| Orn/DAP/Arg decarboxylase 2 [Rhodobacter sphaeroides WS8N]
 gi|77386956|gb|ABA78141.1| Putative Ornithine decarboxylase [Rhodobacter sphaeroides 2.4.1]
 gi|332275135|gb|EGJ20450.1| Orn/DAP/Arg decarboxylase 2 [Rhodobacter sphaeroides WS8N]
          Length = 381

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 46/350 (13%), Positives = 102/350 (29%), Gaps = 21/350 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEV 63
           P        L       +         +  A+K      + + L      G   +S +E+
Sbjct: 23  PVLFFSPSTLQATARRFIDGFPGM---VTYAVKSNPEEVVIENLAAAGIRGYDVASPHEI 79

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            +           YN   +      V       +   ++ S+L K  +       +I +R
Sbjct: 80  RMIRRIAPDAALHYNNPVRSRSEIGVGVEMGVKSWSVDSASELAKLIELVPAEGCEIAVR 139

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
              +VS + +           L  +   ++      +  + FH   +      +   ++ 
Sbjct: 140 FKLAVSGAAYNFGAKFGATVELAVELLRRVAEAGF-IPSMTFHPGTQCTDPAAWETYIRT 198

Query: 182 IEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEF-SEKYSVQIYLEPG 234
             +        I  +++GGG           +   +     R+ +         +  EPG
Sbjct: 199 AAEIARDAGVTIARLNVGGGFPSHRLNGVEPELEAIFHLIDRVTDEAFGADRPLLVCEPG 258

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT----- 289
             I  +  TL   +  + ++    +             +   +   +    G        
Sbjct: 259 RGICADAFTLAARIKAVRDDAHVFLNDGVYGSLTELPMIGVIDRVAVLTPEGRRRDGETR 318

Query: 290 -AMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
             ++ G +C + D   GE      V+ GD + F+ +  Y+      FNG 
Sbjct: 319 DRIIFGPTCDSVDRLPGELPLAADVEEGDFLVFQGMGAYSAATNTRFNGF 368


>gi|52548994|gb|AAU82843.1| diaminopimelate decarboxylase [uncultured archaeon GZfos1D1]
          Length = 128

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 32/104 (30%), Gaps = 4/104 (3%)

Query: 266 EAHVPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321
              +   +          N     G  T  + G  C +GDI         ++ GD I+  
Sbjct: 16  NLLIRPAMYDAYHEVAVANKADSAGAETYDIVGPICESGDIIARDRKLPLIEPGDVIAVF 75

Query: 322 DVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           DV  Y  +  + +NG    T  + +         +  Y D    
Sbjct: 76  DVGAYGFSMSSQYNGRCRCTEIMVSGGAVDVIREQEHYGDLIAK 119


>gi|126461472|ref|YP_001042586.1| Orn/DAP/Arg decarboxylase 2 [Rhodobacter sphaeroides ATCC 17029]
 gi|126103136|gb|ABN75814.1| Orn/DAP/Arg decarboxylase 2 [Rhodobacter sphaeroides ATCC 17029]
          Length = 381

 Score =  112 bits (280), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 46/350 (13%), Positives = 102/350 (29%), Gaps = 21/350 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEV 63
           P        L       +         +  A+K      + + L      G   +S +E+
Sbjct: 23  PVLFFSPSTLQATARRFIDGFPGM---VTYAVKSNPEEVVIENLAAAGVRGYDVASPHEI 79

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            +           YN   +      V       +   ++ S+L K  +       +I +R
Sbjct: 80  RMIRRIAPDAALHYNNPVRSRSEIGVGVEMGVKSWSVDSASELAKLIELVPAEGCEIAVR 139

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
              +VS + +           L  +   ++      +  + FH   +      +   ++ 
Sbjct: 140 FKLAVSGAAYNFGAKFGATVELAVELLRRVAEAGF-IPSMTFHPGTQCTDPAAWETYIRT 198

Query: 182 IEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEF-SEKYSVQIYLEPG 234
             +        I  +++GGG           +   +     R+ +         +  EPG
Sbjct: 199 AAEIARDAGVTIARLNVGGGFPSHRLNGVEPELEAIFHLIDRVTDEAFGADRPLLVCEPG 258

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT----- 289
             I  +  TL   +  + ++    +             +   +   +    G        
Sbjct: 259 RGICADAFTLAARIKAVRDDAHVFLNDGVYGSLTELPMIGVIDRVAVLTPEGRRRDGETR 318

Query: 290 -AMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
             ++ G +C + D   GE      V+ GD + F+ +  Y+      FNG 
Sbjct: 319 DRIIFGPTCDSVDRLPGELPLAADVEEGDFLVFQGMGAYSAATNTRFNGF 368


>gi|103486685|ref|YP_616246.1| Orn/DAP/Arg decarboxylase 2 [Sphingopyxis alaskensis RB2256]
 gi|98976762|gb|ABF52913.1| Orn/DAP/Arg decarboxylase 2 [Sphingopyxis alaskensis RB2256]
          Length = 397

 Score =  112 bits (280), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 41/332 (12%), Positives = 91/332 (27%), Gaps = 19/332 (5%)

Query: 23  YIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAYNV-- 79
           +  +      + A+K   +  +   L          +S+ EV L        T  +    
Sbjct: 34  FFIERFPGTTMYAVKANPSADLLRVLWDSGVTHYDVASIAEVRLVARTLPQATLCFMHPV 93

Query: 80  -AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNR 138
            A +            T   +T+ +L K   +A +  + + L +   VS           
Sbjct: 94  KAEEAISEAYWKHGVRTFSLDTLDELEKIV-RATEGAQDLNLLVRLRVSS-DHSKLSLAA 151

Query: 139 PFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWI 196
            F    E   + + +  +  +  G+ FH   +  +   ++  ++ +          ++ I
Sbjct: 152 KFGAEPEDVAELLMATRQAADALGICFHVGSQAMTPHAYAQAMERVRAAIVAASVTVDII 211

Query: 197 SLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTT----VLDIS 252
            +GGG   +                   +         E        L+      ++ + 
Sbjct: 212 DVGGGFPSSYPGMEPPPLDAYFDTIHRSFESLPISYSAELWCEPGRALSAEYSSLIVRVE 271

Query: 253 ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY------TAMVCGRSCLAGDIFGEF 306
           +     + ++      + D         +                  G +C   D     
Sbjct: 272 KRRGEELYINDGAYGALFDAAHVGWRFPVSLQRDAESGAELLPFSFYGPTCDDLDHMAGP 331

Query: 307 HFEK-PVKIGDRISFEDVAGYNINRKNWFNGI 337
            F    +K GD I    +  Y    +  FNG 
Sbjct: 332 FFLPADIKAGDFIEIGMLGAYGCAMRTKFNGF 363


>gi|333028924|ref|ZP_08456988.1| putative lysine/ornithine decarboxylase [Streptomyces sp. Tu6071]
 gi|332748776|gb|EGJ79217.1| putative lysine/ornithine decarboxylase [Streptomyces sp. Tu6071]
          Length = 378

 Score =  112 bits (280), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 52/369 (14%), Positives = 107/369 (28%), Gaps = 38/369 (10%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG-H 67
            D   +          R+     +  A+K     G+   L     G  ++   E+     
Sbjct: 2   YDLDGIRARYAEL--CRELPSAAVRFAMKAAPDDGVLRALAAVGAGVDAAGPQELRQALR 59

Query: 68  EKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPS 125
             F  E+  Y    K     A          + ++   L      A        + +   
Sbjct: 60  AGFPVESVHYGNTIKSDADIAEAYALGVRLFVTDSREDLAALARHAPGARVFCRIAVEGG 119

Query: 126 VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE-- 183
            +           P    G +   +        +GL  H   +      +      +   
Sbjct: 120 SALWGLKHKFGCAPDE--GVRLLREAVDLGLVPSGLSVHVGSQQMDPDAWREACDRLAAV 177

Query: 184 -KEFGHFITQIEWISLGGGIHFTDK--------DYPVKDFCQRLKEFSEKY------SVQ 228
            +  G     ++ ++LGGG+             D P+      L+E  E+        + 
Sbjct: 178 LEALGEAGITLDHVNLGGGLPARGYLSAAGEPLDPPLDKIFATLREGVERLRAVHGGHLD 237

Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIK------NLVIVDSSVEAHVP--DYLLYQESAT 280
           + +EPG  +V +  T++  V+ ++          + + +       +   D L Y+    
Sbjct: 238 VVMEPGRWLVADHGTIHARVVRLTRRRMPDGVLQHWLYLSCGKFNGLYEMDALQYRLRFP 297

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEF----HFEKPVKIGDRISFEDVAGYNINRKNW-FN 335
                    A+V G +C + D F            ++ GD +       Y ++     FN
Sbjct: 298 TRSAAPRVPAVVAGPTCDSDDAFAHDRGHVRVPADLRSGDPVEILSCGAYALSYTTRGFN 357

Query: 336 GI-NMPTIA 343
           G   +P + 
Sbjct: 358 GFSPLPVVL 366


>gi|213646093|ref|ZP_03376146.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
          Length = 165

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 52/156 (33%), Gaps = 16/156 (10%)

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDI-SENIKNLVIVDSSVEAHVPDYLLYQES----- 278
           ++V++ +EPG  +V  +  L T V  +     ++ V+VD+     +   +          
Sbjct: 6   HAVKLEIEPGRYLVAQSGVLVTQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHRISAL 65

Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNI 328
                   N      +V G  C +GD+F        E      V  GD +   D   Y  
Sbjct: 66  AADGRALENGPWVETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAYGA 125

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +  + +N   +    + +        R  +  +   
Sbjct: 126 SMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLA 161


>gi|78060535|ref|YP_367110.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia sp. 383]
 gi|77965085|gb|ABB06466.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia sp. 383]
          Length = 391

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 52/377 (13%), Positives = 103/377 (27%), Gaps = 38/377 (10%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGTTSSSL 60
           ++TP Y+ + +  +    +        G +L+++LK      M     + Y DG   +S 
Sbjct: 19  LRTPCYVYEPEVAIARYRSLK---ARLGTRLIVSLKANPNQDMLARCAHAYEDGVELASR 75

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL------ 114
            E+     +     +  N +  +  + A L++    + +    + +F   A++       
Sbjct: 76  GELDAVIGRIKTPRYLNNPSMDEMFMRAGLASRCHFVLDNPDAVARFVPLAREAAAGGST 135

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE---SEIKNVNGLMFHNNCENKS 171
              + LR+N          A  +  F     +  D +    +    V GL   +   +  
Sbjct: 136 PGSVLLRVNAGALAGDDARALWHDHFGMTPNEAHDAVRTLAAASLPVAGLHVFSGPHSFI 195

Query: 172 FLCFSAM---------LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
               +                         +  +SLGGG           +         
Sbjct: 196 RQDATQPDTLVLPERLAALARDLAPANGAPLGSLSLGGGFADDHPGDAAFERYATALAPL 255

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-----------VPD 271
                  + E G AI  +     T V+ +       + V     +H              
Sbjct: 256 SGQYSLAH-ESGRAIFADAGVFATRVVAVKTWQDRTIAVCDGGLSHAFLLAQTESVMRRL 314

Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY--NIN 329
                   T  P       +  G +C   D+ G      P ++GD   F     Y    +
Sbjct: 315 AAPSLVRRTPAPPERGVPTIYVGSTCSRADVIGRDDTGAPPQVGDIAVFARCGAYHRTYS 374

Query: 330 RKNWFNGINMPTIAVKN 346
               F            
Sbjct: 375 MA-HFLSHE-AAHVYVR 389


>gi|300175062|emb|CBK20373.2| unnamed protein product [Blastocystis hominis]
          Length = 452

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 51/372 (13%), Positives = 116/372 (31%), Gaps = 34/372 (9%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSLYEVMLG 66
           + D   +L    T   +     V+   A+KC     + D +          + + E+ + 
Sbjct: 85  IFDLTSVLVQYKTWFNVFG--DVQPFYAMKCNPNPKLMDLMCSLPGMCVDCAGVEEINMC 142

Query: 67  HE-KFGGETHAYNVAYKDCEIDAVLSNCDTII--FNTVSQLNKFKDKAQKLHKKIGLRI- 122
                  +   +    K  E    +          +++ ++ K  D   +  K   + I 
Sbjct: 143 LSRGIKPDHIIFANPIKSVEGIECMRKNGIWTGTVDSIEEVQKMHDVLGEDAKHCRIVIR 202

Query: 123 -NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS---FLCFSAM 178
                S+S   L               ++++       G+ FH    N+    +      
Sbjct: 203 LWVDDSHSIIALGSKFGCHLSEVRGILNQVQLCGMEAVGVAFHVGTGNEDQYAYEKAVRD 262

Query: 179 LKNIEKEFGHFITQIEWISLGGGIH-----FTDKDYPVKDFCQRLKEFSEKYS------V 227
              + K    F   +  + LGGG          ++  +   C  +++  +K+        
Sbjct: 263 SAEVFKMAKEFGFTMTLLDLGGGWAGDLGNDKFENPSLTSVCGIIRDAVKKHEVFSTEGF 322

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISEN---IKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
           ++  EPG     NT ++   VL++S+        +        H                
Sbjct: 323 RMISEPGRYFNNNTVSVACKVLNVSKRGGRTVYKINEGVMGVFHDLILCDMNFDVEPLVE 382

Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344
              + A + G S +  D+         +K+GD I F+++  Y+++         +P   +
Sbjct: 383 GEKHPASIIGSSIMQKDVVLSNIDLPEMKVGDIILFKNIGAYSVSLTT------LP---L 433

Query: 345 KNVDGTIKAIRE 356
           +     +  +R 
Sbjct: 434 RRNQDHVYIVRR 445


>gi|145628393|ref|ZP_01784194.1| diaminopimelate decarboxylase [Haemophilus influenzae 22.1-21]
 gi|144980168|gb|EDJ89827.1| diaminopimelate decarboxylase [Haemophilus influenzae 22.1-21]
          Length = 205

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 46/157 (29%), Gaps = 5/157 (3%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +  G+ + + +   G    S  E
Sbjct: 26  GTPLYVYSRATLERHWHAFDSAFGKRPHLICFAVKSCSNIGVLNIMAKLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKK 117
           +              ++     ++  + A+          +VS+L      A        
Sbjct: 86  LERVLAAGGDASKVVFSGVAKSREEIMRALEVGIRCFNVESVSELKHINQIAGEMGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE 154
           I LR+NP V              ++ G    +  E  
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSVNEAREVY 182


>gi|289672832|ref|ZP_06493722.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. syringae
           FF5]
          Length = 171

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 46/146 (31%), Gaps = 5/146 (3%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  +                 +  A+K  +  G+ + L +   G    S  E
Sbjct: 26  GTPTYVYSRAHIEAQYRAYADALSGMPHMVCFAVKANSNLGVLNVLARLGAGFDIVSRGE 85

Query: 63  VMLGHEK-FGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH--KK 117
           +          E   ++     ++    A+          +  +L + ++ A +L+    
Sbjct: 86  LERVLAADGKAEKIVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQEVAAELNVRAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRL 143
           I LR+NP V              ++ 
Sbjct: 146 ISLRVNPDVDAGTHPYISTGLKENKF 171


>gi|149915813|ref|ZP_01904338.1| Putative Ornithine decarboxylase [Roseobacter sp. AzwK-3b]
 gi|149810395|gb|EDM70240.1| Putative Ornithine decarboxylase [Roseobacter sp. AzwK-3b]
          Length = 401

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 48/350 (13%), Positives = 95/350 (27%), Gaps = 23/350 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGTTSSSLYEVM 64
            Y      L +               +  A+K      +  + +   +     +S  E+ 
Sbjct: 49  LY-FSPAALQDTARRFQQGFDGM---VTYAVKANPGEEVLANLVAAGIRAFDVASPQEMA 104

Query: 65  LGHEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                 G     YN   +  D    A      +   +   +L+K +   +     + L +
Sbjct: 105 AVRAVCGDAVLHYNNPVRSGDEVAVARAYGVASCSVDCPRELDKLESLPRTTEIAVRLAL 164

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
             + +   F       P        K      +  +    FH   +      +   ++  
Sbjct: 165 PVAGAAYDFGEKFGLDPERAAVLLRKVAERGFVPAIT---FHPGTQCADPGAWGTYIEAA 221

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGEA 236
            +       QI  +++GGG                              + ++  EPG A
Sbjct: 222 AEVARAADVQIARLNVGGGFASHRGGDAPDLEAIFAHIRAETDRCFGAQAPRLVCEPGRA 281

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-VPDYLLYQE-----SATIYPNTGPYTA 290
           +V +  TL T V  +       +          + D                    P   
Sbjct: 282 MVADALTLATRVKALRACGAVFLNDGIYGGLMEMRDIGAPGRLRVIDPQGRARQGAPVPR 341

Query: 291 MVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINM 339
           +V G +C + D   E       +  GD I F+ +  Y+ +    FNG  +
Sbjct: 342 VVFGPTCDSLDRLPEPLALPGDIAEGDYILFDGMGAYSRSLTTRFNGYGL 391


>gi|115622692|ref|XP_001202483.1| PREDICTED: similar to ornithine decarboxylase, partial
           [Strongylocentrotus purpuratus]
 gi|115631770|ref|XP_793810.2| PREDICTED: similar to ornithine decarboxylase, partial
           [Strongylocentrotus purpuratus]
          Length = 365

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/304 (14%), Positives = 95/304 (31%), Gaps = 7/304 (2%)

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E+    +         +    K        ++ D  +    ++    K K    H K+ 
Sbjct: 1   NEIQQVLKIGVSPSRIIFANPCKQRSHLKYAADNDVRLMTIDNEAELIKIKKIFPHAKLV 60

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           LRI    S ++  L        R         +    +V G+ FH     +  + +   +
Sbjct: 61  LRILTDDSTAQCQLGLKFGCHPRHAPALLRFAQDLELDVVGVSFHVGSGCRDPMTYVDSI 120

Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
           +N ++ F        ++  + +GGG    +      +      ++  +  V  Y      
Sbjct: 121 RNSKELFDFGNDLGFKMNLLDIGGGFPGQESAPIKFEEVSSQLDWFHESKVIKYFPSPND 180

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAM--VCG 294
           +V NT    +   + +        V  S    + D+   +       +         V G
Sbjct: 181 LVANT-VAPSKCDEPAFMYYVNDGVYGSFNCLLFDHAEVEAQLLKERDGDVQMYSTSVWG 239

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            SC   D   E H    +++G+ + F+D+  Y +   + FNG              +  +
Sbjct: 240 PSCDGIDRIIENHLMPELEVGEWLIFQDMGAYTMCASSEFNGFKRSIGYFIISKEYLSIV 299

Query: 355 REFS 358
            + +
Sbjct: 300 EQIT 303


>gi|302335298|ref|YP_003800505.1| Orn/DAP/Arg decarboxylase 2 [Olsenella uli DSM 7084]
 gi|301319138|gb|ADK67625.1| Orn/DAP/Arg decarboxylase 2 [Olsenella uli DSM 7084]
          Length = 401

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 45/382 (11%), Positives = 105/382 (27%), Gaps = 39/382 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP YL D   L   L     I     V+L  ++K            +        S  E
Sbjct: 18  GTPTYLFDLVALSARLAAVREIL-GPSVRLCYSIKANPFLS--RAAAECGYELEVCSPGE 74

Query: 63  VMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + +            Y+     +     A+      +   +  Q    + +A++   ++ 
Sbjct: 75  LDVCRGLGIEAPAIVYSGVCKGEADVRAALDYGVGVLTAESPRQFELVEQEARRRGLRVP 134

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           + +  +                 L    +D+       + G+ +    + +        L
Sbjct: 135 VLLRLNGGSQ------FGMSRGDLERIVRDREGYGAAELVGIHYFVGTQRRKLQHQRREL 188

Query: 180 KNIEKEFGHFITQIEWI----SLGGGIHFTD-KDYPVKDFCQRLKEFSEKYS-----VQI 229
           + +         +  W       G G+     +     D     +E +           +
Sbjct: 189 QMLCDLADELERRCGWRPVRLEYGPGLAVPYFEGEDFSDTLAPARELAGDLQAVAGRFDL 248

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDS------------SVEAHVPDYLLYQE 277
            +E G  + ++  +  T+V+D+ +   +                   +       +    
Sbjct: 249 TVEMGRFLASSCGSYLTSVVDLKDGQDDETCYAFVDGGINHVNYLGQMMGLKLPVIRNAS 308

Query: 278 SATIYPNT---GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-W 333
                            +CG  C   D+      ++P+   D + FE++  Y++      
Sbjct: 309 VEGGSGGPLSRERRPWTLCGSLCTTNDVLVR-QLDRPLAPDDVLVFENIGAYSVTESMYL 367

Query: 334 FNGINMPTIAVKNVDGTIKAIR 355
           F    MP + ++   G     R
Sbjct: 368 FLSRAMPRVILRRGRGDYVLAR 389


>gi|221638392|ref|YP_002524654.1| Orn/DAP/Arg decarboxylase 2 [Rhodobacter sphaeroides KD131]
 gi|221159173|gb|ACM00153.1| Orn/DAP/Arg decarboxylase 2 [Rhodobacter sphaeroides KD131]
          Length = 381

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 46/350 (13%), Positives = 101/350 (28%), Gaps = 21/350 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEV 63
           P        L       +         +  A+K      + + L      G   +S +E+
Sbjct: 23  PVLFFSPSTLQATARRFIDGFPGM---VTYAVKSNPEEVVIENLAAAGIRGYDVASPHEI 79

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            +           YN   +      V       +   ++ S+L K  +       +I +R
Sbjct: 80  RMIRRIAPDAALHYNNPVRSRSEIGVGVEMGVKSWSVDSASELAKLIELVPAEGCEIAVR 139

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
               VS + +           L  +   ++      +  + FH   +      +   ++ 
Sbjct: 140 FKLPVSGAAYNFGAKFGATVELAVELLRRVAEAGF-IPSMTFHPGTQCTDPAAWETYIRT 198

Query: 182 IEKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEF-SEKYSVQIYLEPG 234
             +        I  +++GGG           +   +     R+ +         +  EPG
Sbjct: 199 AAEIARDAGVTIARLNVGGGFPSHRLNGVEPELEAIFHLIDRVTDEAFGADRPLLVCEPG 258

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT----- 289
             I  +  TL   +  + ++    +             +   +   +    G        
Sbjct: 259 RGICADAFTLAARIKAVRDDAHVFLNDGVYGSLTELPLIGVIDRVAVLTPEGRRRDGETR 318

Query: 290 -AMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
             ++ G +C + D   GE      V+ GD + F+ +  Y+      FNG 
Sbjct: 319 DRIIFGPTCDSVDRLPGELPLAADVEEGDFLVFQGMGAYSAATNTRFNGF 368


>gi|170735000|ref|YP_001774114.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia cenocepacia MC0-3]
 gi|169821038|gb|ACA95619.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia cenocepacia MC0-3]
          Length = 391

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 54/377 (14%), Positives = 107/377 (28%), Gaps = 38/377 (10%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGTTSSSL 60
           ++TP Y+ + +  +    +        G +L+++LK      M     + Y DG   +S 
Sbjct: 19  LRTPCYVYEPEVAIARYRSLK---ARLGTRLIVSLKANPNQDMLARCAHAYEDGVELASR 75

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL------ 114
            E+     +     +  N +  +  + A L++    + +    + +F   A++       
Sbjct: 76  GELDAVIGRIKTPRYLNNPSMDEMFMRAGLASRCHFVLDNPDAVARFVPLAREAAAGGST 135

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN---VNGLMFHNNCEN-- 169
              + LR+N      +   A  +  F     +  D + +       V GL   +   +  
Sbjct: 136 PGAVLLRVNAGALAGEQARALWHDHFGMTPNEAHDAVRTLAAAGLPVAGLHVFSGPHSFI 195

Query: 170 -------KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
                   + +    +              +  +SLGGG           D         
Sbjct: 196 RQDPTQPDTLVLPERLAALARDLAPANGAPLGSLSLGGGFADDHPGDAAFDRYAAALAPL 255

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-----------VPD 271
                  + E G AI  +     T V+ +       + V     +H              
Sbjct: 256 AGPYSLAH-ESGRAIFADAGVFATRVVAVKTWQDRTIAVCDGGLSHAFLLAQTESVMRRL 314

Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY--NIN 329
                   T  P       +  G +C   D+ G      P ++GD   FE    Y    +
Sbjct: 315 AAPSLVRRTPAPPPRGVPTLYVGSTCSRADVIGRDDTGAPPQVGDIAVFERCGAYHRTYS 374

Query: 330 RKNWFNGINMPTIAVKN 346
               F            
Sbjct: 375 MA-HFLSHE-AAHVYVR 389


>gi|326387669|ref|ZP_08209275.1| Orn/DAP/Arg decarboxylase 2 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326207715|gb|EGD58526.1| Orn/DAP/Arg decarboxylase 2 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 402

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 45/333 (13%), Positives = 87/333 (26%), Gaps = 22/333 (6%)

Query: 26  KNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAYNVAYKDC 84
           +    K L A+K   +  +   L          +S+ E  L        T  +    K  
Sbjct: 37  EKFPGKTLYAVKANPSPDLIRVLWDAGVTHYDVASVGEARLVRGLLPEATLCFMHPVKAP 96

Query: 85  EID---AVLSNCDTIIFNTVSQLNKFKDKAQKLHK-------KIGLRINPSVSYSKFILA 134
                        T   +++ +L K +    + +         + +R+  S  YS+  LA
Sbjct: 97  SAILEAYRDHGVRTFSLDSLEELEKIRLATTEANDGVEPTDLTLCVRLRVSSEYSELSLA 156

Query: 135 DPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIE 194
                      +           + G+ FH   +  S   +   L+            ++
Sbjct: 157 SKFGCELSDAAELLQATRQLADCL-GICFHVGSQAMSPHAYVQALEKARAAIVDASVTVD 215

Query: 195 WISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT----LNTTVLD 250
            I +GGG                       Y         E             N+ ++ 
Sbjct: 216 IIDVGGGFPSIYPGMEPPPLEDYFALIDRTYESLPVSYSAELWCEPGRALSAEYNSMIVR 275

Query: 251 ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY-----TAMVCGRSCLAGDIF-G 304
           + +   + + ++      + D         +                 G +C   D   G
Sbjct: 276 VEKRRGDELYINDGAYGALFDAAHVGWRFPVRLLREDANGDNADFSFYGPTCDDMDHMEG 335

Query: 305 EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
            F     ++ GD I    +  Y    K  FNG 
Sbjct: 336 PFELPADIRSGDYIEIGMLGAYGAAMKTRFNGF 368


>gi|87122118|ref|ZP_01078002.1| Orn/DAP/Arg decarboxylase 2 [Marinomonas sp. MED121]
 gi|86162665|gb|EAQ63946.1| Orn/DAP/Arg decarboxylase 2 [Marinomonas sp. MED121]
          Length = 410

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 63/402 (15%), Positives = 127/402 (31%), Gaps = 63/402 (15%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           I+TP YL    ++  N           G KL+ ++K      +    + Y+D G   +S+
Sbjct: 15  IETPCYLYSVSQVAANYQALTSAL---GTKLIYSMKANNNADLLMRASHYLDGGIEVASI 71

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+ L       E    N +     + A +++  TII + + QL+  ++   K   K  L
Sbjct: 72  GELNLV-AGGDSEKFINNPSADKKFLRAAVASRSTIIVDNLIQLDALEEFIGKRPLKPIL 130

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN------VNGLMFHNNCENK---S 171
               S    +F    P     + G       ++  +       + G    N   +    +
Sbjct: 131 LRLNSSVLKRFNEHHPGVRADQFGMDWDTVEKAIARCKSLQIPLAGFHLFNGSYSFAKVA 190

Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQI 229
                A +  +++    + + + +++LGGG   H+ D+ +  + +   LKEF     + +
Sbjct: 191 TATAIAGIAILQEVERLYGSPLSFVNLGGGFSDHWQDQPFDFEAYRALLKEF--PSHITL 248

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD-----------SSVEAHVP-------- 270
             E G  ++ +     T V    +  K+   +             +  A           
Sbjct: 249 AHETGRGLMASAGYFATRVRYTKQIEKDFFAICDGGINQNFLLAQTENAFRRLKQPLLWR 308

Query: 271 --------------------DYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEF 306
                               D    +            +        G SC   D+ G+ 
Sbjct: 309 KSEMRVAAESGQDASSNQGADTEQDKAHQTAGPEATNVSDKGACTYVGSSCSKDDVIGKQ 368

Query: 307 HFE-KPVKIGDRISFEDVAGYNINRK-NWFNGINMPTIAVKN 346
           + +    + GD   F D   YN +     F  +      +  
Sbjct: 369 NDDQPRPEAGDICVFADCGAYNASYTMTPFLKLPQAKTYIIE 410


>gi|254393674|ref|ZP_05008800.1| diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC
           27064]
 gi|197707287|gb|EDY53099.1| diaminopimelate decarboxylase [Streptomyces clavuligerus ATCC
           27064]
          Length = 454

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 48/346 (13%), Positives = 98/346 (28%), Gaps = 38/346 (10%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P YL D   L  +            V+L  A K      +   L  Y+DG   +S  E+ 
Sbjct: 20  PAYLYDLGALREHAAAVRAALPER-VELYYAAKANPETEILTALAPYVDGYEVASGGELA 78

Query: 65  LGHEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                  G   A+       +    A+ S        +  +L    D A +   +  + +
Sbjct: 79  HVARAVPGRPLAFGGPGKTPEEIRAALASGVGRFHVESAHELAVLADLAARARVRARVLL 138

Query: 123 NPSVSYSKFILAD----PNRPFSRLGEKCKDKI---------ESEIKNVNGLMFHNNCEN 169
             +++    +L           +  G    D            S    + G+  H     
Sbjct: 139 RFNLAVPGELLDGSALAMGGRPAPFGIDPADADAVVRTLTEGSSPWLELFGIHAHLASGL 198

Query: 170 ---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFS 222
              +     +++ +            +  +++GGG+        + +    + + L   +
Sbjct: 199 DARRQLAVAASVTRWAAALTARHGVPLREVNVGGGMAVDYARPGERFDWAAYGRGLAALA 258

Query: 223 EKYSVQIY-LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP----------- 270
           +++   +  +EPG A+        T VLD+  +      V      H+            
Sbjct: 259 DEHPDTVLRIEPGRALTVYCGWYATDVLDVKRSRGEDFAVVRGGTHHLRTPATKGHDQPC 318

Query: 271 ---DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313
                  +          GP    + G+ C   D+         V 
Sbjct: 319 AVLPADDWPHPWPRPATGGPGPVTLVGQLCTPKDLLARAVPLTAVH 364


>gi|302818156|ref|XP_002990752.1| hypothetical protein SELMODRAFT_236110 [Selaginella moellendorffii]
 gi|300141490|gb|EFJ08201.1| hypothetical protein SELMODRAFT_236110 [Selaginella moellendorffii]
          Length = 146

 Score =  111 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 53/141 (37%), Gaps = 7/141 (4%)

Query: 231 LEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-- 287
           +EPG ++V N   L   V  +  N  KN +++D S+   +   L                
Sbjct: 1   MEPGRSLVANAAALVNRVTGVKTNGNKNFIVIDGSMSELIRPSLYDAYQHIELVAPAGSD 60

Query: 288 ---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344
               T  V G  C + D  G+       K GD I   D   Y ++  + +N    P    
Sbjct: 61  AEVKTYDVVGPVCESADFLGKNRELPTPKRGDGIVVHDAGAYCMSMASTYNLKMRPPEYW 120

Query: 345 KNVDGTIKAIRE-FSYNDYYN 364
              DG+I  IR   +++D+  
Sbjct: 121 IEDDGSITKIRHAETFDDHLR 141


>gi|148557557|ref|YP_001265139.1| Orn/DAP/Arg decarboxylase 2 [Sphingomonas wittichii RW1]
 gi|148502747|gb|ABQ71001.1| Orn/DAP/Arg decarboxylase 2 [Sphingomonas wittichii RW1]
          Length = 397

 Score =  111 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 48/333 (14%), Positives = 87/333 (26%), Gaps = 21/333 (6%)

Query: 34  LALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAYNV---AYKDCEIDAV 89
            A+K   +  +   L +        +S+ EV L        T  +     A +       
Sbjct: 45  YAVKANPSPELIQILWENGITHFDVASIAEVRLVAGIAPEATLCFMHPVKAEEAIAEAYS 104

Query: 90  LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY-SKFILADPNRPFSRLGEKCK 148
                T   +++ +L K                    S  SK  LA          ++  
Sbjct: 105 DYGVRTFSLDSIEELEKIVRATNGATDLTLCVRMRVSSELSKLSLASKFGVEQAEAKELL 164

Query: 149 DKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD 208
            +       + G+ FH   +  S   +   ++ +          ++ I +GGG      D
Sbjct: 165 QRTRQVADAL-GICFHVGSQAMSPSAYVQAMERVRAAIVAAAVTVDVIDVGGGFPSVYPD 223

Query: 209 YPVKDFCQRLKEFSE-------KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV 261
                         +        YS +++ EPG A+     +L   V     +   +   
Sbjct: 224 MEPPALEAYFGAIHQAFESLPVSYSSELWCEPGRALCAEYASLLVRVERRRGDELYINDG 283

Query: 262 DSSVEAHVPDYLLYQESATIYPNTGPYT-----AMVCGRSCLAGDIF-GEFHFEKPVKIG 315
                A      +                        G +C   D   G F     V  G
Sbjct: 284 AYG--ALFDAAHIGWRFPVKLLREPESPARDIGFSFYGPTCDDMDRMAGPFMLPADVGPG 341

Query: 316 DRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348
           D I    +  Y    +  FNG       +   +
Sbjct: 342 DYIEIGMLGAYGCAMRTGFNGFTAGDRVIVEDE 374


>gi|198434359|ref|XP_002122694.1| PREDICTED: similar to Ornithine decarboxylase (ODC) [Ciona
           intestinalis]
          Length = 389

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 51/345 (14%), Positives = 102/345 (29%), Gaps = 60/345 (17%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +YL D  +++ NL           ++   A+KC  +  +   L     G   +S +E+  
Sbjct: 52  FYLGDLGQIVRNLQMWRKHM--PQIRPYYAMKCNPSQPVIQLLASLGVGFDCASGFEIES 109

Query: 66  GHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
             +     +   + V  K       A  +   T+ F+   +L+K K      +       
Sbjct: 110 ALKCGVQPDDILFAVPCKMSSHIKYACQTGVRTMTFDNADELHKIKRIHPTGN------- 162

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
                                                     +   +   +  S      
Sbjct: 163 --------------------------------------FHPGSGSNSFDPIDRSLQQCRE 184

Query: 183 EKEFGH-FITQIEWISLGGGIHFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIVT 239
             +F +     ++ I +GGG+  T+    V         K F  +  V++  EPG  +V 
Sbjct: 185 LYDFANLNGIDLKIIDIGGGLVCTESFIKVSFQITTAVNKLFPPETGVKVIAEPGTFLVE 244

Query: 240 NTTTLNTTVLD---ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----YTAMV 292
           N  +  T V     + +  K  +        ++  +  ++               Y   V
Sbjct: 245 NAFSFVTNVHGKALVGDTAKYYIGAGVFTAFNLKFFEEFKRIPENLSREAEKGKYYRTSV 304

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
            G +C   D   +       +I D   F+++  Y+      FNG 
Sbjct: 305 YGPTCAGDDCVVDNIMLPEAQINDWWIFDNMGAYSSLVSLGFNGY 349


>gi|119627879|gb|EAX07474.1| arginine decarboxylase, isoform CRA_f [Homo sapiens]
          Length = 483

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 34/330 (10%), Positives = 105/330 (31%), Gaps = 18/330 (5%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++       +++    V+   A+KC ++ G+   L Q   G + ++  E+ L
Sbjct: 109 FFVADLGAIVR--KHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 166

Query: 66  G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             H              K        +     + +  +++      A+ +        + 
Sbjct: 167 VQHIGIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEME----LAKVVKSHPSANFHI 222

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
                       +   +RL  +   ++  ++  ++        E  + + F  +   I  
Sbjct: 223 GSGCPDPQAYAQSIADARLVFEMGTELGHKMHVLDLGGGFPGTE-GAKVRFEEIASVINS 281

Query: 185 EFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTL 244
               +  +   + +   +               +          +  +PG        + 
Sbjct: 282 ALDLYFPEGCGVDIFAELGRYYVTSAFTVAVSIIA-----KKEVLLDQPGR--EEENGST 334

Query: 245 NTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFG 304
           + T++    +     I +S +  ++    + Q+  +       Y++ + G +    D   
Sbjct: 335 SKTIVY-HLDEGVYGIFNSVLFDNICPTPILQKKPSTEQP--LYSSSLWGPAVDGCDCVA 391

Query: 305 EFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
           E  +   + +GD + F+++  Y +   + F
Sbjct: 392 EGLWLPQLHVGDWLVFDNMGAYTVGMGSPF 421


>gi|163747196|ref|ZP_02154551.1| Putative Ornithine decarboxylase [Oceanibulbus indolifex HEL-45]
 gi|161379471|gb|EDQ03885.1| Putative Ornithine decarboxylase [Oceanibulbus indolifex HEL-45]
          Length = 386

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 47/355 (13%), Positives = 97/355 (27%), Gaps = 30/355 (8%)

Query: 22  LYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGTTSSSLYEVMLGHEKFGGETHAYNVA 80
              + +    +  A+K      +  + +   +     +S  E+             YN  
Sbjct: 37  RRFQADFDGLVTYAVKANDRPEVLSNLVAAGITSFDVASPAEMAAVRAVCPQAVLHYNNP 96

Query: 81  YKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNR 138
            +              +   + +S+L K  D  +     +   +    +   F       
Sbjct: 97  VRSTAEVKAGIVAGVYSWSIDDMSELAKLHDVPRDNEVAVRFALPVKGAAYDF------- 149

Query: 139 PFSRLGEKCKDKIESEIKNVNG-----LMFHNNCENKSFLCFSAMLKNIEKEFGHFITQI 193
             S+ G             V       L FH   +      +   +             I
Sbjct: 150 -GSKFGAAPAQAAALLRAVVEMGFTPSLCFHPGTQCNDPQAWVQYVHAAADILRMADVSI 208

Query: 194 EWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTT 247
           + +++GGG                      L E     +  +  EPG A+V +   L T 
Sbjct: 209 KRMNIGGGFAVDRGFDAPDHRAVFAAVKAALAESFGAEAPTLLCEPGRAMVADAAVLATR 268

Query: 248 VLDISENIKNLVIVDSSVEAH--VPDYLLYQESATI-----YPNTGPYTAMVCGRSCLAG 300
           +  +    + + + D        + D  L      +          P   +V G +C + 
Sbjct: 269 IKGMRNEGRTVFLNDGIYGGLPDLRDMGLSGLVDVVGPDGALRQGAPKPRVVFGPTCDSL 328

Query: 301 DIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
           D   +        + GD + F  +  Y+I     FNG  +  + + +  G     
Sbjct: 329 DRLPDGLPLPEDAQTGDYLLFGGMGAYSIAMSTAFNGYGLGRVELVSGLGDEVKR 383


>gi|299069046|emb|CBJ40297.1| putative diaminopimelate decarboxylase [Ralstonia solanacearum
           CMR15]
          Length = 428

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 64/393 (16%), Positives = 123/393 (31%), Gaps = 40/393 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG----VKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
            TP ++  + +L+ N+         AG    V + +     A   +   L     G    
Sbjct: 37  GTPVFIYSEAQLVRNIRRVKSAISAAGLDGRVSIFVPFFPNANPHILKPLRDEGAGILLQ 96

Query: 59  SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
              E  L  +    +    +  +   E  A  S  D  +F  ++ L++     ++    I
Sbjct: 97  MPNEYKLITQYGFSDFIV-SPGHVSNEEIAFWSQKDYPVF--LASLDEIAYAIREQAPTI 153

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
            +RI+   S    I  D               + +  + +     +    N         
Sbjct: 154 SVRIDSLGSDKPGIKVDQLG-------DLAKLLSANGRTLECFEVYCGSGNSLQGMIDIA 206

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKDFCQRLKEFSEKYSVQ--- 228
            +       HF      I+  GG  F         K +    + Q +++ + +  +    
Sbjct: 207 RQIFRMYLDHF-PTARSINFAGGHGFDYAKWSEAEKHFDWTTYFQAIRDLATEMKIPETV 265

Query: 229 -IYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQESAT------ 280
               EPG  ++ +   L T +  DI ++    ++V       +P   L   +        
Sbjct: 266 RFLFEPGRDVLADAGVLLTGIKRDIVQHSLGNIVVTDGSRMLMPSAQLRNRAHHTVFLDA 325

Query: 281 ----IYPNTGPYTAMVCGRSCLAGDIF--GEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
               +   +    A V GRS L  D    G+    + VK G+ +   DV  Y   +   F
Sbjct: 326 AFNEVVDYSKRCVAKVRGRSILRNDYILPGDVVAPETVKAGEYMLILDVGAYCATQHMEF 385

Query: 335 NGINMPTIAVKNVDGTIKAIREFSYN-DYYNNL 366
             +      +   DG I  +     + D + NL
Sbjct: 386 LNVPPAGEVLVEADGAIYMVTRPGNDLDKWRNL 418


>gi|271965222|ref|YP_003339418.1| diaminopimelate decarboxylase [Streptosporangium roseum DSM 43021]
 gi|270508397|gb|ACZ86675.1| diaminopimelate decarboxylase [Streptosporangium roseum DSM 43021]
          Length = 432

 Score =  110 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 59/396 (14%), Positives = 112/396 (28%), Gaps = 47/396 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           PY+++       NL + L +    GV  ++  A K   A    +T      G   +S  E
Sbjct: 36  PYHVLFPDAFAANLTSFLDVLDETGVTGRVHYAKKANKAACWIETCADLGVGVDVASAEE 95

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +         G         K  ++  +      +I      L++    A     +I LR
Sbjct: 96  LRDALGHGVRGTRIVVTGPAKSDDLLRLAVRQGCLITV--DALDELDRVAGLYGARIMLR 153

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML-- 179
           + P                  L      ++E    ++ G       +  + L        
Sbjct: 154 VTPPDQPHSRFGMTERELERALARCGPLRLEGFSCHLTGYEVQPRADMAALLLRWCERAR 213

Query: 180 ------------------KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF------- 214
                                 +++  F         G         +            
Sbjct: 214 ARGIAAGGVGIGGGFAVDYLAAEDWREFTGDPSNFHAGRRFDGFYPYHSPVAGAAALRAV 273

Query: 215 --------CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE 266
                      +        V + LEPG A++         V  + +    +V VD +  
Sbjct: 274 LAATPSGGSADVAALLRDAGVTLILEPGRALLDQAGFTVFRVQGVKDRDYGIVTVDGTSL 333

Query: 267 AHVPDYL----LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFH--FEKPVKIGDRISF 320
           +    +     L +           +   V G SCL  D+            + GD + +
Sbjct: 334 SLSEQWFGSEFLPEPIPVPAREGPAFETCVGGASCLESDMLTWRRIVLPGRPRPGDLLVY 393

Query: 321 EDVAGYNINRK-NWFNGINMPTIAVKNVDGTIKAIR 355
            + AGY ++   + F+G+ +P   V N DG+ +  R
Sbjct: 394 PNTAGYQMDSNESPFHGLPLPPKVVVNADGSWRLDR 429


>gi|13471573|ref|NP_103139.1| ornithine decarboxylase [Mesorhizobium loti MAFF303099]
 gi|14022315|dbj|BAB48925.1| ornithine decarboxylase [Mesorhizobium loti MAFF303099]
          Length = 406

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 51/363 (14%), Positives = 101/363 (27%), Gaps = 34/363 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEV 63
           P Y    Q L  +    + +      K   A+K      +  TL +        +S  E 
Sbjct: 19  PVYCFRPQVLKADARQFMGMFPG---KTAYAVKTNGEQIVLKTLVEAGVTAFDVASPGEF 75

Query: 64  MLGHEKFGGETHAYNV---AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG- 119
                        Y     A  D ++         I  +   ++ K     + L    G 
Sbjct: 76  AAVRAVSPDAEMLYMHPVKAQSDIKLALEKYGIRVISLDHEDEITKLTRVVRALDIDPGS 135

Query: 120 ---LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
                   +   + + L+           +  +++      V GL FH   + +    + 
Sbjct: 136 ISVFVRIQTKGSAAYELSKKFGAGPAYAVELAERLNRTGYKV-GLCFHVGSQIEDPDTYE 194

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---------LKEFSEKYSV 227
             L + +         I  + +GGG        P +   +          L    ++Y  
Sbjct: 195 RALASADWVRNRLTFDIAGLDVGGGFPAEYGHDPNRKQIEMPSLGQIMSRLSGDLKEYQF 254

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ--------ESA 279
                  E          + ++ +       + ++  + A + D    +           
Sbjct: 255 DQMPLVAEPGRVIVARCLSLIVRVLLRKGKRLYINDGIWASLSDSWTGKITLPARFIPDP 314

Query: 280 TIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWF 334
            I    G         VCG +C + DI     +    V  GD I    +  Y+++ +  F
Sbjct: 315 AIRTRNGAEKNVVPFKVCGATCDSVDILSRPFWLPETVDTGDWIEIGHIGAYSLSLRTRF 374

Query: 335 NGI 337
           NG 
Sbjct: 375 NGF 377


>gi|241607215|ref|XP_002405819.1| ornithine decarboxylase, putative [Ixodes scapularis]
 gi|215500690|gb|EEC10184.1| ornithine decarboxylase, putative [Ixodes scapularis]
          Length = 358

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 47/333 (14%), Positives = 103/333 (30%), Gaps = 15/333 (4%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D + L + +D     ++  G+    A+KC     +  TL+        S++ E+ +
Sbjct: 29  FFVCDVRDLEHKVDLWR--QELPGITPFYAVKCSTDPVVLHTLSSRGVNFDCSNMSEIKM 86

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             E     +   Y    K        S     +            K    + ++ LRI  
Sbjct: 87  VLEMGVSPDRIVYANTIKSSSHLDFASEHGVTLMTFDCMEEL--GKISDKNARLLLRIAS 144

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
           + + S   + +                     NV G+ FH     +    F+  +     
Sbjct: 145 NETGSGITMNNKFGCRLEEAGNLLQIARYMGFNVVGIAFHVGAAYRCPDIFARSIAEARS 204

Query: 185 EFG---HFITQIEWISLGGGI-HFTDKDYPVKDFCQRLKEFSEKYSV-----QIYLEPGE 235
            F         +  + +GGG          +   C+ ++   ++Y       ++  EPG+
Sbjct: 205 VFNVGIRIGHPMTVLDIGGGFTGGLRSHDRLLKLCETIRVAVDEYFPASSGVRVIAEPGQ 264

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-PDYLLYQESATIYPNTGPYTAMVCG 294
             VT+  TL T V+        +          +         +   +       + V G
Sbjct: 265 FFVTSAYTLATRVVAERRKDIEINGEFGQKYNEIKYTVCASGHAQPPHERPCNILSTVWG 324

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
            +C   D   +      V + + +  +++  Y 
Sbjct: 325 ATCNPLDCILDKQPLFEVCVNEWLLMDNMGAYT 357


>gi|290969752|ref|XP_002667945.1| predicted protein [Naegleria gruberi]
 gi|284080827|gb|EFC35201.1| predicted protein [Naegleria gruberi]
          Length = 144

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 43/139 (30%), Gaps = 5/139 (3%)

Query: 230 YLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG-- 286
             EPG ++V N   L T V  +     KN  +VD+++   +   +               
Sbjct: 1   MFEPGRSVVGNAGLLLTEVQYLKHGEEKNFAVVDAAMNDLMRPAMYEAWHGVQTVKENAG 60

Query: 287 -PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
            P    V G  C +GD          +  GD ++      Y +   + +N        + 
Sbjct: 61  QPRIYDVVGPVCESGDWLARSRELA-IHEGDLLALMSAGAYGMTMASNYNTRGRAAEVLV 119

Query: 346 NVDGTIKAIREFSYNDYYN 364
           +           +  D + 
Sbjct: 120 DGSQVHLVRARENPADLFA 138


>gi|319782827|ref|YP_004142303.1| Orn/DAP/Arg decarboxylase 2 [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317168715|gb|ADV12253.1| Orn/DAP/Arg decarboxylase 2 [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 406

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 51/363 (14%), Positives = 100/363 (27%), Gaps = 34/363 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEV 63
           P Y    Q L+ +    + +      K   A+K      +  TL +        +S  E 
Sbjct: 19  PVYCFRPQVLMADARQFMGMFPG---KTAYAVKTNGEQIVLKTLVEAGVKAFDVASPGEF 75

Query: 64  MLGHEKFGGETHAYNV---AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG- 119
                        Y     A  D ++         I  +   ++ K     + L    G 
Sbjct: 76  AAVRAVSPDAEMLYMHPVKAQSDIKLALEKYAIRVISLDHEDEITKLTRVVRALDIDPGS 135

Query: 120 LRINPSVSYSKFILA---DPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
           + +   V                      +  +++      V GL FH   + +    + 
Sbjct: 136 ISVFVRVQTKGHAAYELSKKFGAGPAYAVELAERLNRTGYKV-GLCFHVGSQIEDPDTYE 194

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---------LKEFSEKYSV 227
             L + +         I  + +GGG        P +   +          L    ++Y  
Sbjct: 195 RALASADWVRNRLTFDIAGLDVGGGFPAEYGHDPNRKQIEMPSLGQIMSRLSGDLKEYQF 254

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ--------ESA 279
                  E          + ++ +       + ++  + A + D    +           
Sbjct: 255 DQMPLVAEPGRVIVARCLSLIVRVLLRKGKRLYINDGIWASLSDSWTGKITLPARFIPDP 314

Query: 280 TIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWF 334
            I    G         VCG +C + DI     +    V  GD I    +  Y+++ +  F
Sbjct: 315 AIRSRNGEEKNIVPFKVCGATCDSVDILSRPFWLPETVDTGDWIEIGHIGAYSLSLRTRF 374

Query: 335 NGI 337
           NG 
Sbjct: 375 NGF 377


>gi|146279119|ref|YP_001169278.1| Orn/DAP/Arg decarboxylase 2 [Rhodobacter sphaeroides ATCC 17025]
 gi|145557360|gb|ABP71973.1| Orn/DAP/Arg decarboxylase 2 [Rhodobacter sphaeroides ATCC 17025]
          Length = 381

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 41/349 (11%), Positives = 95/349 (27%), Gaps = 19/349 (5%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEV 63
           P        L       +         +  A+K      + + L      G   +S +E+
Sbjct: 23  PVLFFSPSILQATARRFIDGFPGM---VTYAVKSNPEEVVIENLAAAGIRGYDVASPHEI 79

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
            +           YN   +     AV        ++  S+    K       +   + + 
Sbjct: 80  RMIRRIAPDAALHYNNPVRSRAEIAVAVEMGVKSWSVDSKSELAKLIELVPAEGCEISVR 139

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-VNGLMFHNNCENKSFLCFSAMLKNI 182
             +  S        +  + +    +          +  + FH   +      +   ++  
Sbjct: 140 FKLPVSGAAYNFGAKFGATVELAIELLKTVAEAGFIPSMTFHPGTQCTDPAAWETYIRTA 199

Query: 183 EKEFGHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEF-SEKYSVQIYLEPGE 235
            +        I  +++GGG           +   +     R+ +         +  EPG 
Sbjct: 200 AEIAREAGVTIARLNVGGGFPSHRLNGVEPELEAIFHLIDRVADEAFGADRPLLVCEPGR 259

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT------ 289
            I  +  TL T +  + ++    +             +   +  ++    G         
Sbjct: 260 GICADAFTLATRIKAVRDDAHVFLNDGVYGSLTELPLIGVIDRVSVLTPEGRRREGETRD 319

Query: 290 AMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGI 337
            ++ G +C + D           V  GD + F+ +  Y+      FNG 
Sbjct: 320 RIIFGPTCDSVDRLPGELPLSVDVAEGDFLVFQGMGAYSTATNTRFNGF 368


>gi|84386911|ref|ZP_00989935.1| Orn/DAP/Arg decarboxylase, family 2 [Vibrio splendidus 12B01]
 gi|84378201|gb|EAP95060.1| Orn/DAP/Arg decarboxylase, family 2 [Vibrio splendidus 12B01]
          Length = 404

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 66/387 (17%), Positives = 129/387 (33%), Gaps = 33/387 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           +YL+D  K  +N D  L   K   +   +  + K      +   +++        S  E 
Sbjct: 17  FYLLDSSKFEDNYDEFLLAFKKYYSKTNIGYSYKTNYTPKLCKIVDRKGGYAEVVSDMEY 76

Query: 64  MLGHE-KFGGETHAYNVAYKDCEI-DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI--- 118
            L  +     E    N  YK  +     +     +  ++ +++   K+ AQ    K    
Sbjct: 77  ALALKLSVRAENIVVNGPYKPVKFLKEAIFGGSIVNLDSYTEIELVKELAQDNPDKQLKV 136

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
           G+R N  +          +   S   E+ K   E     V G+  H   +  +       
Sbjct: 137 GIRCNFDIGNDVVSRFGIDVEDSTFFEQFKLINEIANLEVVGIHCHF-PDRNAPSYKVRA 195

Query: 179 LKNIEKEFGHFITQIEWISLGGGI-----------HFTDKDYPVK------DFCQRLKEF 221
            K I      F T  ++I +GGG              +  +Y          F +R  + 
Sbjct: 196 EKIIALSDKLFKTPPKYIDVGGGYFGKMPDALKGQFSSYHEYDEYAENIASQFAKRYGDL 255

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI 281
            E     + LEPG AIV +T    + ++DI       + + S  + ++            
Sbjct: 256 PESEQPTLILEPGSAIVGDTVKFVSKIIDIKSVRGKFIAMSSGSKFNIGLLSSSVNMPIE 315

Query: 282 YPNTGPYTAM----VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
             +           + G +C+  D   + +   P+   D +   +V  Y+I  K  F   
Sbjct: 316 VFSKEQGEYFIDIDISGFTCIESDYLYKGYN-GPLSKDDYVVLSNVGSYSIVFKPPFILP 374

Query: 338 NMPTIAVKNVDGTIKAIRE-FSYNDYY 363
           N P   ++  + + + ++   +  D +
Sbjct: 375 NFP--VLEMAEQSFEIVKRKETVEDIF 399


>gi|107028395|ref|YP_625490.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia cenocepacia AU 1054]
 gi|116686391|ref|YP_839638.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia cenocepacia HI2424]
 gi|105897559|gb|ABF80517.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia cenocepacia AU 1054]
 gi|116652106|gb|ABK12745.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia cenocepacia HI2424]
          Length = 391

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 54/377 (14%), Positives = 107/377 (28%), Gaps = 38/377 (10%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGTTSSSL 60
           ++TP Y+ + +  +    +        G +L+++LK      M     + Y DG   +S 
Sbjct: 19  LRTPCYVYEPEVAIARYRSLK---ARLGTRLIVSLKANPNQDMLARCAHAYEDGVELASR 75

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL------ 114
            E+     +     +  N +  +  + A L++    + +    + +F   A++       
Sbjct: 76  GELDAVIGRIKTPRYLNNPSMDEMFMRAGLASRCHFVLDNPDAVARFVPLAREAAAGGST 135

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN---VNGLMFHNNCEN-- 169
              + LR+N      +   A  +  F     +  D + +       V GL   +   +  
Sbjct: 136 PGAVLLRVNAGALAGEQARALWHDHFGMTPNEAHDAVRTLAAAGLPVAGLHVFSGPHSFI 195

Query: 170 -------KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
                   + +    +              +  +SLGGG           D         
Sbjct: 196 RQDPTQPDTLVLPELLAALARDLAPANGAPLGSLSLGGGFADDHPGDAAFDRYAAALAPL 255

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-----------VPD 271
                  + E G AI  +     T V+ +       + V     +H              
Sbjct: 256 AGPYSLAH-ESGRAIFADAGVFATRVVAVKTWQDRTIAVCDGGLSHAFLLAQTESVMRRL 314

Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY--NIN 329
                   T  P       +  G +C   D+ G      P ++GD   FE    Y    +
Sbjct: 315 AAPSLVRRTPAPPPRGVPTLYVGSTCSRADVIGRDDAGAPPQVGDIAVFERCGAYHRTYS 374

Query: 330 RKNWFNGINMPTIAVKN 346
               F            
Sbjct: 375 MA-HFLSHE-AAHVYVR 389


>gi|330952170|gb|EGH52430.1| diaminopimelate decarboxylase [Pseudomonas syringae Cit 7]
          Length = 90

 Score =  109 bits (272), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 10/80 (12%), Positives = 24/80 (30%), Gaps = 1/80 (1%)

Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344
           + P    + G  C  GD   +      +  GD ++      Y     + +N        +
Sbjct: 5   SEPRAYDIVGPICETGDFLAKGRELA-LAEGDLLAVHSAGAYGFVMSSNYNTRGRAAEVL 63

Query: 345 KNVDGTIKAIREFSYNDYYN 364
            +     +  R  +  + + 
Sbjct: 64  VDGSQAFEVRRRETVAELFA 83


>gi|148698195|gb|EDL30142.1| mCG13535 [Mus musculus]
          Length = 366

 Score =  109 bits (272), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 73/254 (28%), Gaps = 12/254 (4%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           + + D   L++   T L       V+   A+KC +   +   L     G   +S  E+  
Sbjct: 52  FMVADLDVLVSRHRTFLQALPR--VQPFYAVKCNSNPWVLLVLAALGTGFDCASQGELEQ 109

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       +    K        + C   +    ++    K        ++ LRI  
Sbjct: 110 VLGLGVAPSRIIFANPCKAVSHIQFAARCGVQLLTFDNEEELIKLARYHPRARLVLRIQT 169

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S S F L                        V G  FH   +  +   +   + +  +
Sbjct: 170 LDSQSTFPLHTKFGAHLEACGHLLQVARELGLAVVGASFHVGSDCHTPESYRQAIADCHR 229

Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRL------KEFSEKYSVQIYLEPGE 235
            F         +  + LGGG           +   R+      + F E+  +++  EPG 
Sbjct: 230 VFEMGCKAGHHMSLLDLGGGFPGVKGSEAKFEEVARVINTALAQYFPEETGIEVIAEPGR 289

Query: 236 AIVTNTTTLNTTVL 249
               +  T    ++
Sbjct: 290 FYAGSVCTAAVNII 303


>gi|115360880|ref|YP_778017.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia ambifaria AMMD]
 gi|115286208|gb|ABI91683.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia ambifaria AMMD]
          Length = 391

 Score =  109 bits (272), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 52/378 (13%), Positives = 106/378 (28%), Gaps = 40/378 (10%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGTTSSSL 60
           ++TP Y+ + +  +    +        G KL+++LK      M     + Y DG   +S 
Sbjct: 19  LRTPCYVYEPEVAIARYRSLK---ARLGTKLIVSLKANPNQDMLARCAHAYEDGVELASR 75

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL------ 114
            E+     +     +  N +  +  + A L++    + +    + +F   A++       
Sbjct: 76  GELDAVIGRIRTPRYLNNPSMDEMFMRAGLASRCHFVLDNPDAVARFVPLAREAATGGAT 135

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE---------SEIKNVNGLMFHN 165
              + LR+N      +   A  +  F     +  D +          + +   +G     
Sbjct: 136 PGAVLLRMNAGALAGEHARALWHDHFGMTPNEAHDAVRTLAAAGLPAAGLHVFSGPHSFI 195

Query: 166 NCENKSFLCF---SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP-VKDFCQRLKEF 221
             +            +              +  +SLGGG           + +   L   
Sbjct: 196 RQDAAQPDTLVLPERLAALARDLAPANGAPLSALSLGGGFADDHPGDAAFERYAAALAPL 255

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-----------VP 270
           +  Y   +  E G AI  +     T V+ +       + V     +H             
Sbjct: 256 AGDY--TLAHEAGRAIFADAGVFATRVVAVKPWQDRTIAVCDGGLSHAFLLAQTESVMRR 313

Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY--NI 328
                       P +     +  G +C   D+ G      P ++GD   F     Y    
Sbjct: 314 LAAPSLVRRGAAPPSRAVPTLYVGSTCSRADVIGRDDTGAPPQVGDIAVFARCGAYHRTY 373

Query: 329 NRKNWFNGINMPTIAVKN 346
                F            
Sbjct: 374 AMA-HFLSHE-AAHVYVR 389


>gi|83747325|ref|ZP_00944366.1| Hypothetical Protein RRSL_02271 [Ralstonia solanacearum UW551]
 gi|83726025|gb|EAP73162.1| Hypothetical Protein RRSL_02271 [Ralstonia solanacearum UW551]
          Length = 428

 Score =  109 bits (272), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 64/393 (16%), Positives = 125/393 (31%), Gaps = 40/393 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG----VKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
            TP ++  + +L+ N+         AG    V + +     A   +   L     G    
Sbjct: 37  GTPVFIYSEAQLVRNIRRVKSAISAAGLDGRVSIFVPFFPNANPHILKPLRDEGAGILLQ 96

Query: 59  SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
              E  L  +    +    +  +   E  A  S     +F  ++ L++     ++    I
Sbjct: 97  MPNEYKLITQYGFSDFIV-SPGHVSNEEIAFWSQKHYPVF--LASLDEIAYAVRENAPTI 153

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
            +RI+   S    I  D               + +  +++     +    N         
Sbjct: 154 SVRIDSLGSDKPGIKVDQLG-------SLAQMLSASGRSLECFEVYCGSGNSLQGMIDIA 206

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDK-------DYPVKDFCQRLKEFSEKYSVQ--- 228
            +       HF      I+  GG  F  +        +    + Q +++ + +  +    
Sbjct: 207 RQIFRMYLDHF-PTARSINFAGGHGFNYEKWSESEKRFDWTTYFQAIRDLATEMKIPETV 265

Query: 229 -IYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQESAT------ 280
               EPG  ++ +   L T +  DI ++    ++V       +P   L   S        
Sbjct: 266 KFMFEPGRDVLADAGVLLTGIKRDIVQHSLGNIVVTDGSRMLMPSAQLRNRSHNTVFLDS 325

Query: 281 ----IYPNTGPYTAMVCGRSCLAGDIF--GEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
               I   +    A + GRS L  D    GE    + +K G+ +   DV  Y   +   F
Sbjct: 326 AFNEIVDYSKRCNAKIRGRSILRNDYILPGEVVAPETIKAGEYMLILDVGAYCATQHMEF 385

Query: 335 NGINMPTIAVKNVDGTIKAIREFSYN-DYYNNL 366
             +      +   DGTI  + +   + D + NL
Sbjct: 386 LNVPPAGEVLVEADGTIYMVTKPGNDLDKWRNL 418


>gi|260464329|ref|ZP_05812521.1| Orn/DAP/Arg decarboxylase 2 [Mesorhizobium opportunistum WSM2075]
 gi|259029953|gb|EEW31237.1| Orn/DAP/Arg decarboxylase 2 [Mesorhizobium opportunistum WSM2075]
          Length = 406

 Score =  109 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 51/363 (14%), Positives = 101/363 (27%), Gaps = 34/363 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEV 63
           P Y    Q L  +    + +      K   A+K      +  TL +        +S  E 
Sbjct: 19  PVYCFRPQVLKADARQFMGMFPG---KTAYAVKTNGEQIVLKTLVEAGVTAFDVASPGEF 75

Query: 64  MLGHEKFGGETHAYNV---AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG- 119
                        Y     A  D ++         I  +   ++ K     + L    G 
Sbjct: 76  SAVRAVSPDAEMLYMHPVKAQSDIKLALEKYAIRVISLDHEDEITKLTRVVRALDIDPGA 135

Query: 120 ---LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
                   +   + + L+           +  +++      V GL FH   + +    + 
Sbjct: 136 ISVFVRIQTKGSAAYELSKKFGAGPAYAVELAERLNRTGYKV-GLCFHVGSQIEDPDTYE 194

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---------LKEFSEKYSV 227
             L + +         I  + +GGG        P +   +          L    ++Y  
Sbjct: 195 RALASADWVRNRLTFDIAGLDVGGGFPAEYGHDPNRKQIEMPSLGQIMSRLSGDLKEYQF 254

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ--------ESA 279
                  E          + ++ +       + ++  + A + D    +           
Sbjct: 255 DQIPLVAEPGRVIVARCLSLIVRVLLRKGKRLYINDGIWASLSDSWTGKITLPARFIPDP 314

Query: 280 TIYPNTGPY----TAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWF 334
            I    G         VCG +C + DI     +    V  GD I    +  Y+++ +  F
Sbjct: 315 AIRSRNGEEKNIVPFKVCGATCDSVDILSRPFWLPETVDTGDWIEIGHIGAYSLSLRTRF 374

Query: 335 NGI 337
           NG 
Sbjct: 375 NGF 377


>gi|254250509|ref|ZP_04943828.1| Diaminopimelate decarboxylase [Burkholderia cenocepacia PC184]
 gi|124879643|gb|EAY66999.1| Diaminopimelate decarboxylase [Burkholderia cenocepacia PC184]
          Length = 402

 Score =  109 bits (271), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 54/377 (14%), Positives = 107/377 (28%), Gaps = 38/377 (10%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGTTSSSL 60
           ++TP Y+ + +  +    +        G +L+++LK      M     + Y DG   +S 
Sbjct: 30  LRTPCYVYEPEIAIARYRSLK---ARLGTRLIVSLKANPNQDMLARCAHAYEDGVELASR 86

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL------ 114
            E+     +     +  N +  +  + A L++    + +    + +F   A++       
Sbjct: 87  GELDAVIGRIKTPRYLNNPSMDEMFMRAGLASRCHFVLDNPDAVARFVPLARESAAGGST 146

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN---VNGLMFHNNCEN-- 169
              + LR+N      +   A  +  F     +  D + +       V GL   +   +  
Sbjct: 147 PGAVLLRVNAGALAGEQARALWHDHFGMTPNEAHDAVRTLAAAGLPVAGLHVFSGPHSFI 206

Query: 170 -------KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
                   + +    +              +  +SLGGG           D         
Sbjct: 207 RQDPTQPDTLVLPELLAALARDLAPANGAPLGSLSLGGGFADDHPGDAAFDRYAAALAPL 266

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-----------VPD 271
                  + E G AI  +     T V+ +       + V     +H              
Sbjct: 267 AGPYSLAH-ESGRAIFADAGVFATRVVAVKTWQDRTIAVCDGGLSHAFLLAQTESVMRRL 325

Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY--NIN 329
                   T  P       +  G +C   D+ G      P ++GD   FE    Y    +
Sbjct: 326 AAPSLVRRTPAPPPRGVPTLYVGSTCSRADVIGRDDAGAPPQVGDIAVFERCGAYHRTYS 385

Query: 330 RKNWFNGINMPTIAVKN 346
               F            
Sbjct: 386 MA-HFLSHE-AAHVYVR 400


>gi|294953653|ref|XP_002787871.1| Ornithine decarboxylase, putative [Perkinsus marinus ATCC 50983]
 gi|239902895|gb|EER19667.1| Ornithine decarboxylase, putative [Perkinsus marinus ATCC 50983]
          Length = 470

 Score =  109 bits (271), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 49/415 (11%), Positives = 103/415 (24%), Gaps = 85/415 (20%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67
           L+D  +L + +     +     V    A+KC     +  TL +       +++ E+ L  
Sbjct: 47  LLDLGQLEHQMRRWKDLLPR--VTPYYAVKCNPEPMLVKTLYRLGCKFDCATINEMRLVR 104

Query: 68  ----------EKFGGETHAYNVAYKDCEID-------AVLSNCDTIIFNTVSQLNKFKDK 110
                     E F       +                A     + ++ ++ S++ K    
Sbjct: 105 NILSDDIGTTEGFDVHEMMASHVVYANPTKLPSQLVGARDLGVEYLVADSASEIAKIAHH 164

Query: 111 AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170
             K    + L    + +               +    ++       NV G+ FH      
Sbjct: 165 HPKAKLLLRLACVDNNAQCPMSAKFGASLGVTVTVLLEEA-MKHGVNVVGVSFHVGSGCS 223

Query: 171 SFLCFSAMLKNIEKEFG----HFITQIEWISLGGGI--------HFTDKDYPVKDFCQRL 218
                +  L +  + F      +  ++  + +GGG             K           
Sbjct: 224 DVHSITKALVDAREVFDAAASRYGLRLSVLDIGGGFQGVDREGSPVAFKSMATVVNSLLD 283

Query: 219 KEFSEKYSVQIYLEPGEAIVTNTT------TLNTTVLDISENIKNLVIVDSSVEAHVPDY 272
             F +   VQ+  EPG     +             V+   +  +     D + E  +   
Sbjct: 284 TLFPDPDDVQVIAEPGRYFACSPCSLVTKIYSKNVVVSAPKLSEMKSAADIAEEDTMDSG 343

Query: 273 LLYQ--------------------------------ESATIYPNTGPY------------ 288
                                                          +            
Sbjct: 344 SSSSSASVDELAGKNLTSLTRLYLNDGVYGSFNCILYDHQQVWPEALHEESGVCGDPKVA 403

Query: 289 --TAMVCGRSCLAGDIFGEFH-FEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
             T ++ G +C   D           ++IG  + + ++  Y       FNG + P
Sbjct: 404 NPTHVLFGPTCDGFDTIMNGVTHLPEMEIGHHLLWRNMGAYTTAAATNFNGFDTP 458


>gi|90418219|ref|ZP_01226131.1| ornithine decarboxylase [Aurantimonas manganoxydans SI85-9A1]
 gi|90337891|gb|EAS51542.1| ornithine decarboxylase [Aurantimonas manganoxydans SI85-9A1]
          Length = 406

 Score =  109 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 47/363 (12%), Positives = 97/363 (26%), Gaps = 34/363 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEV 63
           P Y      L  + +  +            A+K      + +TL++        +S  E 
Sbjct: 19  PVYCFRPAVLTADAERFMAAFPG---DTAYAVKTNGEPMVLETLSRAGVRIFDVASPGEF 75

Query: 64  MLGHEKFGGETHAYNV---AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG- 119
                        Y     A  D  +         +  +   ++ K     + L    G 
Sbjct: 76  EAVRAAQPDAEMLYMHPVKAQSDIRLALETYGIRVMSLDHEDEVVKILRVVRALDLDPGK 135

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV---NGLMFHNNCENKSFLCFS 176
           + +   +        + ++ F        + ++     +    G+ FH   + +    + 
Sbjct: 136 ITLFIRIQTKGSAAYELSKKFGAAPAHAVELLQR-CHRIGFKVGICFHVGSQIEDPDTYE 194

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ------------RLKEFSEK 224
             L + +         +  I +GGG        P +   +               E    
Sbjct: 195 RALASADWVRNRADVPLAGIDVGGGFPAEYGHDPRRRKKEMPGFGAIMTRLTADMEEWGF 254

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI---------VDSSVEAHVPDYLLY 275
             + +  EPG  +V    +L   VL        +               +          
Sbjct: 255 SDMPMVAEPGRVVVARAFSLIVRVLLRKGKRLYINDGIWASLSDSWTGKITLPARFIPDP 314

Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWF 334
              +            VCG +C + DI     +    V  GD I    +  Y+++ +  F
Sbjct: 315 ARQSRNGDPANIQAFKVCGATCDSVDILSRPFWLPETVDTGDWIEIGHIGAYSLSLRTRF 374

Query: 335 NGI 337
           NG 
Sbjct: 375 NGF 377


>gi|125539468|gb|EAY85863.1| hypothetical protein OsI_07224 [Oryza sativa Indica Group]
          Length = 427

 Score =  109 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 42/354 (11%), Positives = 97/354 (27%), Gaps = 24/354 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           + ++D  ++           +  GV+   A+KC     +   L     G   +S  E+  
Sbjct: 63  FNVLDLGEVARLFAAWWRGLR--GVRPYYAVKCNPNPALLGALAGLGAGFDCASRAEMEA 120

Query: 66  GHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                   +   Y      +     A     D   F++  ++ K K         + ++ 
Sbjct: 121 VLALGVAADRVVYANQCKLEPHLEYAAGVGVDLTTFDSEEEVGKIKRCHPGCRLLLRIKA 180

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN--VNGLMFHNNCENKSFLCFSAMLK 180
                    +L    +  +   E       +      V G+ FH          ++A ++
Sbjct: 181 PDGDDGGGAMLNLGTKYGAHRDEVVPLLAAARRAGMAVVGVSFHVGSAVSRVGIYAAAIE 240

Query: 181 NIEKEFGHFITQIEWIS--LGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYL------- 231
                 G   +  +  S  +   +        +    + + E    ++   +        
Sbjct: 241 AARAGGGGGESTFQGASAVISAALARHFGGDDMPSGVEVIAEPGRYFAETAFALAARIFG 300

Query: 232 -----EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT- 285
                E  E  + +        +     +     V ++ +              I     
Sbjct: 301 KRTRGEVREYWIDDGMFGTLCCVHFENYVPRPAPVTATADDGDEQAATMGGEMMITSTNT 360

Query: 286 --GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
               + + V G +  + D     +    +  GD + F+DV  Y     + FNG 
Sbjct: 361 STKTHPSTVFGPTLDSFDEVVRGYQLPELCTGDWLVFDDVGAYTTVCSSDFNGF 414


>gi|226328787|ref|ZP_03804305.1| hypothetical protein PROPEN_02687 [Proteus penneri ATCC 35198]
 gi|225201973|gb|EEG84327.1| hypothetical protein PROPEN_02687 [Proteus penneri ATCC 35198]
          Length = 351

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 48/337 (14%), Positives = 97/337 (28%), Gaps = 39/337 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++     +   +             +  A K  +   +   +        S SL E
Sbjct: 11  GTPLWIYQGDTISQRIAQLNSFDV-----VRFAQKACSNIHILRLMKAQGVKVDSVSLGE 65

Query: 63  VMLGH-----EKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
           +                  +     D      +   D  +   ++  L +   +      
Sbjct: 66  IERALVAGYQGGREKSEIVFTADLLDERTIERVVELDIPVNAGSIDMLRQLGKR--NQGH 123

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENK 170
            + +RINP   +      +     S+ G   +D       I+     + G   H      
Sbjct: 124 AVWIRINPGFGHGHSQKTNTGGENSKHGIWYEDVPEALAVIQQYNLTLVGFHMHIGSGVD 183

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK------ 224
                S     +E+        I+ IS GGG+    ++              +K      
Sbjct: 184 YHHLSSVCDAMVEQVLTSQ-VDIQAISAGGGLSTPYQEGDATVDLDHYFSLWDKARQRIA 242

Query: 225 ----YSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVPDYLLYQESA 279
               +S+++ +EPG  +V  +  L + V  +     ++ V+VD+     +   +      
Sbjct: 243 QHLGHSIELEIEPGRFLVAESGVLISQVRAVKSMGSRHYVLVDAGFSDLMRPAMYGSYHQ 302

Query: 280 --------TIYPNTGPYTAMVCGRSCLAGDIFGEFHF 308
                    I P T     +V G  C +GD+      
Sbjct: 303 ISVLDSHGQIKPMTELQETIVAGPLCESGDVLLSKRE 339


>gi|328468746|gb|EGF39721.1| diaminopimelate decarboxylase [Lactobacillus rhamnosus MTCC 5462]
          Length = 258

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 77/230 (33%), Gaps = 20/230 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           +TP Y+ D   + + +     + + AGV   +  A K FA   M++            S 
Sbjct: 26  QTPLYVYDVGAIRHQIRAFKQVFETAGVAYAISYASKAFATIAMYEVAKAEAIHVDVVSG 85

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVS--QLNKFKDKAQKLH 115
            E+       F  E  +++   K       A+ +   TII +      L     KA    
Sbjct: 86  GELYTAQAADFPMEKVSFHGNNKSKAELEQALDAGVGTIIVDNFHELDLLDELLKAAVGK 145

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---------EKCKDKIESEIKNVNGLMFHNN 166
           + + +R+ P +S          +  S+ G         E  K  +  +  N+ G+  H  
Sbjct: 146 QNVLIRVAPGISAHTHAYDQTGQTDSKFGFDLESGQADEAAKRVLADDHLNLLGIHAHIG 205

Query: 167 CENKSFLCFSAMLKN----IEKEFGHFITQIEWISLGGGIHFTDKDYPVK 212
            +      F A+ +     ++     F    + +++GGG           
Sbjct: 206 SQIFEVTGFEAVTQKLLAVLDHWHQQFGFTPKVLNVGGGFGIAYTKQDDP 255


>gi|83594465|ref|YP_428217.1| Orn/DAP/Arg decarboxylase 2 [Rhodospirillum rubrum ATCC 11170]
 gi|83577379|gb|ABC23930.1| Orn/DAP/Arg decarboxylase 2 [Rhodospirillum rubrum ATCC 11170]
          Length = 404

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 45/374 (12%), Positives = 101/374 (27%), Gaps = 32/374 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP+Y  D+  + +    AL     AG+ +  +LK      +   +   +DG  ++S  E
Sbjct: 32  GTPFYAYDRGAV-SARIAALRAALPAGMAIRYSLKANPMAALLAHMAPLVDGFDAASAGE 90

Query: 63  VMLGHE--KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           +  G                    +I + ++    ++  +++++ +          +  +
Sbjct: 91  LRAGLAVGMAPAALSIAGPGKSPADILSAVAAGALVVVESLAEVGRVAQAGNASGLRPRV 150

Query: 121 RINPSVSYSKFILADPNRPFSR-LGEKCKD------KIESEIKNVNGLMFHNNCENKSFL 173
            +  +               +R  G            I +   +  GL      +     
Sbjct: 151 LVRVNPEAEIQGAGLRMGGGARPFGIDADQVPGVLAAIAAHDLDYQGLHCFWGSQALDAE 210

Query: 174 CFSAMLKNIEKEFGHFI--TQIEWISLGGGIHFTD----KDYPVKDFCQRLKEFSEKYSV 227
             +     + +             I +GGG             +      + E +     
Sbjct: 211 RIARAFAVVGQTLLDLAGPRPPRQIVIGGGFGIPYTPTSAPLDLARAGAAVAETAGLLGD 270

Query: 228 QIY-----LEPGEAIVTNTTTLNTTVLDISENIKNLV-------IVDSSVEAHVPDYLLY 275
            +      LE G  +V         + +   +  NL          + +   +    +  
Sbjct: 271 HLPGVSLGLELGRFLVGEAGVYVCAIRESKRSRGNLFLVTDGGLHHNQAATGNFGQVVRR 330

Query: 276 QESATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK- 331
                I    G      A + G  C   D+F E         GD ++      Y  +   
Sbjct: 331 PYPLVIATRMGEPVSERATITGCLCTPLDVFAEALAIPAAAEGDLVAIFQSGAYGASASP 390

Query: 332 NWFNGINMPTIAVK 345
           + F G       + 
Sbjct: 391 SAFLGHPPAVELLV 404


>gi|294634821|ref|ZP_06713345.1| diaminopimelate decarboxylase [Edwardsiella tarda ATCC 23685]
 gi|291091789|gb|EFE24350.1| diaminopimelate decarboxylase [Edwardsiella tarda ATCC 23685]
          Length = 122

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 14/114 (12%), Positives = 30/114 (26%), Gaps = 14/114 (12%)

Query: 265 VEAHVPDYLLYQESATIYPNTGPY-------TAMVCGRSCLAGDIFGEF-------HFEK 310
               +   +                        +V G  C +GD+F +            
Sbjct: 5   FNDLMRPAMYGSHHHISLLARDGRALSGPLIETVVGGPLCESGDVFTQREGGTVTACALP 64

Query: 311 PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             ++GD + F D   Y  +  + +N   +    +    G     R     + + 
Sbjct: 65  AAQVGDWLVFHDTGAYGASMSSNYNSRPLLPEVLVTEQGVTLIRRRQRMEELFA 118


>gi|332185823|ref|ZP_08387570.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein
           [Sphingomonas sp. S17]
 gi|332014181|gb|EGI56239.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein
           [Sphingomonas sp. S17]
          Length = 411

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/332 (10%), Positives = 81/332 (24%), Gaps = 25/332 (7%)

Query: 26  KNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAYNV---AY 81
           +    + + A+K   +  +   L         ++S+ EV L           +     + 
Sbjct: 53  EKFPGRPMYAVKANPSPDLIQILWDNGITHFDTASIAEVRLVKSVAPQAVCCFMHPVKSE 112

Query: 82  KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS 141
           +            T   +++ +L K     Q              S             S
Sbjct: 113 EAIAEAYFTHGVRTYSLDSMEELEKIVRATQGATDLTLCVRMRVSSEY-----AKLSLGS 167

Query: 142 RLGEKCKD-----KIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWI 196
           + G   ++         ++ +  G+ FH   +  +   +SA ++ +          ++ I
Sbjct: 168 KFGVSLEESKDLLIATRQVADALGICFHVGSQTMTPDAYSAAMERVRAAIVAAAVTVDVI 227

Query: 197 SLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
            +GGG              +  +     +         E        L      +   ++
Sbjct: 228 DVGGGFPSAYPGMTPPPLERFFETIHRAFESLPVSYSAELWAEPGRALCAEYSSVVVRVE 287

Query: 257 NLVIVDSSVEA-----HVPDYLLYQESATIYPNTGP-----YTAMVCGRSCLAGDIF-GE 305
                +  +             +  +                     G +C   D   G 
Sbjct: 288 RRRGNELYINDGAYGALFDAAHIGWKYPVQLLREPDSDARDMDFSFWGPTCDDLDFMQGP 347

Query: 306 FHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
           F        GD      +  Y    +  FNG 
Sbjct: 348 FPLPADTNTGDYFEIGMLGAYGQAMRTQFNGF 379


>gi|300697287|ref|YP_003747948.1| diaminopimelate decarboxylase [Ralstonia solanacearum CFBP2957]
 gi|299074011|emb|CBJ53548.1| putative diaminopimelate decarboxylase [Ralstonia solanacearum
           CFBP2957]
          Length = 428

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 60/393 (15%), Positives = 120/393 (30%), Gaps = 40/393 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG----VKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
            TP ++  + +L+ N+         AG    V + +     A   +   L     G    
Sbjct: 37  GTPVFIYSEAQLVRNIRRVKSAISAAGLDGRVSIFVPFFPNANPHILKPLRDEGAGILLQ 96

Query: 59  SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
              E  L  +    +      +      + +           ++ L++     ++    I
Sbjct: 97  MPNEYKLITQYGFSDFIV---SPGHVSNEEIAFWSKKHYPVFLASLDEIAYAIRENAPTI 153

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
            +RI+   S    I  D               + +  + +     +    N         
Sbjct: 154 SVRIDSLGSDKPGIKVDQLG-------SLAQMLSASGRTLECFEVYCGSGNSLQGMIDIA 206

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDK-------DYPVKDFCQRLKEFSEKYSVQ--- 228
            +       HF      I+  GG  F  +        +    + Q +++ + +  +    
Sbjct: 207 RQIFRMYLDHF-PTARSINFAGGHGFNYEKWSETEKHFDWTTYFQAIRDLATEMKIPETV 265

Query: 229 -IYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQESAT------ 280
               EPG  ++ +   L T +  DI ++    ++V       +P   L   S        
Sbjct: 266 KFMFEPGRDVLADAGVLLTGIKRDIVQHSLGNIVVTDGSRMLMPSAQLRNRSHNTVFLDS 325

Query: 281 ----IYPNTGPYTAMVCGRSCLAGDIF--GEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
               +   +   +A V GRS L  D    GE      +K G+ +   DV  Y   +   F
Sbjct: 326 AFNEVVDYSKRCSAKVRGRSILRNDYILPGEVVAPGTIKAGEYMLILDVGAYCATQHMEF 385

Query: 335 NGINMPTIAVKNVDGTIKAIREFSYN-DYYNNL 366
             +      +   DGTI  + +   + D + NL
Sbjct: 386 LNVPPAGEVLVEADGTIYMVTKPGNDLDKWRNL 418


>gi|207724408|ref|YP_002254805.1| orn/dap/arg decarboxylase 2; protein [Ralstonia solanacearum MolK2]
 gi|206589629|emb|CAQ36590.1| orn/dap/arg decarboxylase 2; protein [Ralstonia solanacearum MolK2]
          Length = 428

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 64/393 (16%), Positives = 125/393 (31%), Gaps = 40/393 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG----VKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
            TP ++  + +L+ N+         AG    V + +     A   +   L     G    
Sbjct: 37  GTPVFIYSEAQLVRNIRRVKSAISAAGLDGRVSIFVPFFPNANPHILKPLRDEGAGILLQ 96

Query: 59  SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
              E  L  +    +    +  +   E  A  S     +F  ++ L++     ++    I
Sbjct: 97  MPNEYKLITQYGFSDFIV-SPGHVSNEEIAFWSQKHYPVF--LASLDEIAYAVRENAPTI 153

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
            +RI+   S    I  D               + +  +++     +    N         
Sbjct: 154 SVRIDSLGSDKPGIKVDQLG-------SLAQMLSASGRSLECFEVYCGSGNSLQGMIDIA 206

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDK-------DYPVKDFCQRLKEFSEKYSVQ--- 228
            +       HF      I+  GG  F  +        +    + Q +++ + +  +    
Sbjct: 207 RQIFRMYLDHF-PTARSINFAGGHGFNYEKWSESEKHFDWTTYFQAIRDLATEMKIPETV 265

Query: 229 -IYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQESAT------ 280
               EPG  ++ +   L T +  DI ++    ++V       +P   L   S        
Sbjct: 266 KFMFEPGRDVLADAGVLLTGIKRDIVQHSLGNIVVTDGSRMLMPSAQLRNRSHNTVFLDS 325

Query: 281 ----IYPNTGPYTAMVCGRSCLAGDIF--GEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
               I   +    A + GRS L  D    GE    + +K G+ +   DV  Y   +   F
Sbjct: 326 AFNEIVDYSRRCNAKIRGRSILRNDYILPGEVVAPETIKAGEYMLILDVGAYCATQHMEF 385

Query: 335 NGINMPTIAVKNVDGTIKAIREFSYN-DYYNNL 366
             +      +   DGTI  + +   + D + NL
Sbjct: 386 LNVPPAGEVLVEADGTIYMVTKPGNDLDKWRNL 418


>gi|222832227|gb|EEE70704.1| predicted protein [Populus trichocarpa]
          Length = 124

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 32/112 (28%), Gaps = 4/112 (3%)

Query: 257 NLVIVDSSVEAHVPDYLLYQES---ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313
           N  IVD+++       +             N       V G  C +GD  G       V+
Sbjct: 8   NFCIVDAAMNDLARPAMYEAFHRIEPVAPRNDAGVMYDVVGPVCESGDWLGRDRTLA-VQ 66

Query: 314 IGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
            GD ++      Y     + +N        + + D            D + N
Sbjct: 67  AGDLLAVMSAGAYGFVMSSNYNTRGRAAEVMVDGDTVHLVRERELPADLFRN 118


>gi|111225759|ref|YP_716553.1| putative diaminopimelate decarboxylase protein [Frankia alni
           ACN14a]
 gi|111153291|emb|CAJ65043.1| putative diaminopimelate decarboxylase protein [Frankia alni
           ACN14a]
          Length = 476

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 59/432 (13%), Positives = 109/432 (25%), Gaps = 90/432 (20%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT---------------LNQ 50
            YL D      N             +L  A+K      + D                L  
Sbjct: 38  AYLYDPTVAARNAAALRGCLPG-WAELCFAVKANGFPPVLDALLRGAAAAGTPADIQLAD 96

Query: 51  --------------------------------YMDGTTSSSLYEVMLGHEKFG------- 71
                                            +DG   SS+ E  L    +G       
Sbjct: 97  IRAHGPGAGGGPDPSVGPGASGGPDPRVCGHGGVDGFEVSSVGETRLALAAYGRVAPARS 156

Query: 72  GETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVS--- 127
               A   A     + A++      +   +  +L + +  A +  +++ + +  + +   
Sbjct: 157 PYLVASGPAKSSTLLTALVEAGVSIVNVESPGELRRLEAVAARFGRRVTVAVRVNPARVA 216

Query: 128 -----YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK----SFLCFSAM 178
                      +    P S +             +V G   H    N             
Sbjct: 217 LAGSLQMGGRPSAFGVPESEVPAVLDLARRLPHLDVAGFHVHAVSGNLDAAAHLDYVRWC 276

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKD-------YPVKDFCQRLKEFSEKYSVQIYL 231
           L+  E+        +  + +GGG+    +        + +  F + L        V++ +
Sbjct: 277 LEFAERTAADAGIDLRVVDVGGGLGVPFEPDRRGERPFDLDRFGEGLARLPVPPGVRMII 336

Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH--VPDYLLYQESATIY------- 282
           EPG  +V +       V+D+  +     +V      H  +P       +  +        
Sbjct: 337 EPGRLLVADCGWYAAEVIDVKRSYGTDFVVLRGGIHHFALPTSWEIVHNFAVVAGPTSTA 396

Query: 283 -----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNG 336
                 +T      V G  C   D         PV+ GD + F     Y        F G
Sbjct: 397 AEDKGVDTAGRPVTVVGELCTPEDTLARDITVGPVRPGDVVVFPMAGAYGYEFALADFLG 456

Query: 337 INMPTIAVKNVD 348
              P   V    
Sbjct: 457 HPRPARVVLGES 468


>gi|326917946|ref|XP_003205254.1| PREDICTED: antizyme inhibitor 1-like [Meleagris gallopavo]
          Length = 450

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 52/373 (13%), Positives = 114/373 (30%), Gaps = 33/373 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D  KL+        +     +K    ++C +  G+ + L     G   SS  E+ L
Sbjct: 40  FYVGDLGKLVKKNIQWQNVMAP--IKPFYTVRCNSTPGVLEILGTLGIGFACSSKSEMAL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        +     I    S +   K        K+ L I  
Sbjct: 98  VQGLGISPENIIYTNPCKQASQIKYAAKAGINIMTCDSDIELKKIARNHPDAKLLLHIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
               +   +        +      +  +     + G+ FH +   K    +   + +   
Sbjct: 158 EDITADEEMNMKFGTTLKNCRHLMECAKELGVQIVGVKFHVSGSCKELQTYIHAISDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
            F     F  ++  + +GGG   ++   ++            F ++  +++  EPG   V
Sbjct: 218 VFDMAEEFGFKMNMLDIGGGFTGSELQLEEVNHVIRPLLDVYFPKESGIEVIAEPGCYYV 277

Query: 239 TNTTTLNTTVLD---ISENIKNLVIVDSSVEAHVPDYLLY-------------------- 275
           ++  TL   ++    +  +      V+ +     P +  Y                    
Sbjct: 278 SSAFTLAVNIIAKKAVDCDKLLPSGVEQARNDDEPVFTYYINDGVYGSFASKLSEKLNTN 337

Query: 276 -QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
            +       +   + + + G SC   D   E      + +GD + F+++    +  ++ F
Sbjct: 338 PEVHKKYKEDEPLFASSLWGPSCDELDQIVENCLLPELSVGDWLIFDNMGSGTLGEQSTF 397

Query: 335 NGINMPTIAVKNV 347
           +    P I     
Sbjct: 398 SDYQRPLIYYMMS 410


>gi|17548900|ref|NP_522240.1| putative diaminopimelate decarboxylase protein [Ralstonia
           solanacearum GMI1000]
 gi|17431150|emb|CAD17830.1| putative orn/dap/arg decarboxylase 2; protein [Ralstonia
           solanacearum GMI1000]
          Length = 428

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 63/393 (16%), Positives = 124/393 (31%), Gaps = 40/393 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG----VKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
            TP ++  + +L+ N+         AG    V + +     A   +   L     G    
Sbjct: 37  GTPVFIYSEAQLVRNIRRVKSAISAAGLDGRVSIFVPFFPNANPHILKPLRDEGAGILLQ 96

Query: 59  SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
              E  L  +    +    +  +   E  A  S  D  +F  ++ L++     ++    I
Sbjct: 97  MPNEYKLITQYGFSDFIV-SPGHVSNEEIAFWSKKDYPVF--LASLDEIAYAIREHAPTI 153

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
            +RI+   S    I  D               + +  +++     +    N         
Sbjct: 154 SVRIDSLGSDKPGIKVDQLG-------DLAKLLSANGRSLECFEVYCGSGNSLQGMIDIA 206

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDK-------DYPVKDFCQRLKEFSEKYSVQ--- 228
            +       HF      I+  GG  F  +        +    + Q +++ + +  +    
Sbjct: 207 RQIFRMYLDHF-PTARSINFAGGHGFDYEKWSEAEKHFDWATYFQAIRDLATEMKIPETV 265

Query: 229 -IYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286
               EPG  ++ +   L T +  DI ++    ++V       +P   L   +        
Sbjct: 266 RFLFEPGRDVLADAGVLLTGIKRDIVQHSLGNIVVTDGSRMLMPSAQLRNRAHHTVFLDA 325

Query: 287 PYT----------AMVCGRSCLAGDIF--GEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
            +           A V GRS L  D    G+    + VK G+ +   DV  Y   +   F
Sbjct: 326 AFNEVVDYSRRCVAKVRGRSILRNDYILPGDVVAPETVKAGEYMLILDVGAYCATQHMEF 385

Query: 335 NGINMPTIAVKNVDGTIKAIREFSYN-DYYNNL 366
             +      +   DG I  + +   + D + NL
Sbjct: 386 LNVPPAGEVLVEADGAIYMVTKPGNDLDKWRNL 418


>gi|260576326|ref|ZP_05844317.1| Orn/DAP/Arg decarboxylase 2 [Rhodobacter sp. SW2]
 gi|259021397|gb|EEW24702.1| Orn/DAP/Arg decarboxylase 2 [Rhodobacter sp. SW2]
          Length = 381

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/349 (12%), Positives = 92/349 (26%), Gaps = 19/349 (5%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEV 63
           P        L  +    L         +  A+K      + + L+     G   +S  E+
Sbjct: 23  PVMFFSPAVLQASARRFLDGFPG---LVTYAVKSNPEEVVIENLSAAGIRGFDVASPAEM 79

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
            +           YN   +     AV        ++  S     K       +   + + 
Sbjct: 80  RMIRRLCPDAAMHYNNPVRARSEIAVAVGLGVKSYSVDSASELAKLIELVPAENCEITVR 139

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-VNGLMFHNNCENKSFLCFSAMLKNI 182
             +  S        +  + +               +  + FH   +      + A ++  
Sbjct: 140 FKLPVSGAAYNFGAKFGATVELATSLLKTVAAAGFIPSITFHPGTQCTDPHAWEAYIRAA 199

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK-------EFSEKYSVQIYLEPGE 235
            +        I  +++GGG         V       +       E        +  EPG 
Sbjct: 200 AQIAADAGVTIARLNVGGGFPNHRLHGVVPQLDATFELIDRVTGEAFGDDRPLLVCEPGR 259

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG------PYT 289
            +  +  TL T V  + ++    +             +   +   +    G         
Sbjct: 260 GLCGDAFTLATRVKALRDDAHVFLNDGVYGALAELPLVGVIDRIAVISPEGARREGTEVP 319

Query: 290 AMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWFNGI 337
            +V G +C + D           +  GD + F+ +  Y+      FNG 
Sbjct: 320 RIVFGPTCDSVDRLPGDVLLADDLAEGDYVVFQGMGAYSCATNTRFNGF 368


>gi|148285643|gb|ABQ57511.1| LolD [Epichloe festucae]
          Length = 404

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/351 (12%), Positives = 90/351 (25%), Gaps = 36/351 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++                   A+K      +  TL     G   +S  E+ L
Sbjct: 33  FFVADLNDVVRKWAAWKEAL--PDATPFFAVKSSYDRRLIQTLATCGAGFDCASAEEIEL 90

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                 G E   +    K      +        I F+   +L K      +    + +  
Sbjct: 91  TLSLGIGAERIIFTHPCKPVSSLGLCRKLGITLITFDNECELRKLHHHYPEAQTVLRIFA 150

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFH----NNCENKSFLCFSAM 178
           +   +                G      ++     + G  FH       +  +++     
Sbjct: 151 DDPTNADPLGTKFGAARNDFDG--LVRLVKELNMQLAGASFHAAPSVAVDAAAYVRGIRD 208

Query: 179 LKNIEKEFGHFITQIEWISLGGGI----HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
              +             + +GGG                  +       +  ++I  EPG
Sbjct: 209 AAEVFARARQVGLNPTVLDIGGGYTDSTFQQIAGAVRPAIAECFTSQVGEGRLRILAEPG 268

Query: 235 EAIVTNTTTLNTTV-----------------LDISENIKNLVIVDSSVEAHVPDYLLYQE 277
                +   L   V                 L I++ I +  ++   V        + +E
Sbjct: 269 TLFSCSPFYLAVKVVARRVNATAFGHEPATRLYINDGIYSNFMMRFIVNMTFSPTAVIRE 328

Query: 278 SATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVA 324
                            + GRSC + D           V +GD + F+D+ 
Sbjct: 329 GVWHDQADHTMRGEACSLWGRSCDSNDCINRDCRLGMKVGVGDWLVFKDMG 379


>gi|307250856|ref|ZP_07532784.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306857106|gb|EFM89234.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
          Length = 201

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 47/150 (31%), Gaps = 5/150 (3%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L            +    +  A+K  +   + + + +   G    S  E
Sbjct: 26  GTPAYIYSRATLERRWHAFDKAFGSHPHLICFAVKSNSNIALLNVMARLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +              ++   K       A+          ++++L++  + A +L K   
Sbjct: 86  LERVLAAGGEPSKVVFSGVAKSHSEIQRALEVGIRCFNIESIAELHRINEVAGQLGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC 147
           I LR+NP V              ++ G   
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSV 175


>gi|237797831|ref|ZP_04586292.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331020681|gb|EGI00738.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 96

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 9/79 (11%), Positives = 22/79 (27%), Gaps = 1/79 (1%)

Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
                 + G  C  GD   +      +  GD ++      Y     + +N        + 
Sbjct: 12  EARAYDIVGPICETGDFLAKGRELA-LAEGDLLAVHSAGAYGFVMSSNYNTRGRAAEVLV 70

Query: 346 NVDGTIKAIREFSYNDYYN 364
           +     +  R  +  + + 
Sbjct: 71  DGTQAFEVRRRETVAELFA 89


>gi|328684732|gb|AEB33799.1| hypothetical protein [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
          Length = 201

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 21/150 (14%), Positives = 46/150 (30%), Gaps = 5/150 (3%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L            +    +  A+K  +   + + + +   G    S  E
Sbjct: 26  GTPAYIYSRATLERRWHAFDKAFGSHPHLICFAVKSNSNIALLNVMARLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +              ++   K       A+          ++++L++  + A +L K   
Sbjct: 86  LERVLAAGGEPSKVVFSGVAKSHSEIQRALEVGIRCFNIESIAELHRINEVAGQLGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC 147
           I LR+NP                ++ G   
Sbjct: 146 ISLRVNPDADAHTHPYISTGLKENKFGVSV 175


>gi|307262063|ref|ZP_07543717.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|45825285|gb|AAS77492.1| unknown [Actinobacillus pleuropneumoniae]
 gi|306868242|gb|EFN00065.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
          Length = 201

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 47/150 (31%), Gaps = 5/150 (3%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +   + + + +   G    S  E
Sbjct: 26  GTPAYIYSRATLERHWHAFDKAFGAHPHLICFAVKSNSNIALLNVMARLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +              ++   K       A+          ++++L++  + A +L K   
Sbjct: 86  LERVLAAGGKPSKVVFSGVAKSHSEIQRALEVGIRCFNIESIAELHRINEVAGQLGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC 147
           I LR+NP V              ++ G   
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSV 175


>gi|300693591|ref|YP_003749564.1| diaminopimelate decarboxylase [Ralstonia solanacearum PSI07]
 gi|299075628|emb|CBJ34924.1| putative diaminopimelate decarboxylase [Ralstonia solanacearum
           PSI07]
          Length = 428

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 64/393 (16%), Positives = 127/393 (32%), Gaps = 40/393 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG----VKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
            TP ++  + +L+ N+         AG    V + +     A   +   L     G    
Sbjct: 37  GTPVFIYSEAQLIRNIRRVKAAISAAGLDGRVSIFVPFFPNANPHVLKPLRDEGAGILLQ 96

Query: 59  SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
              E  L  +    +    +  +   E  A  S  +  +F  ++ L++      +    I
Sbjct: 97  MPNEYTLITQYGFSDFIV-SPGHVSNEEIAFWSKKNYPVF--LASLDEISYAIHENAPTI 153

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
            +R++   S    I  D             + + ++ + +     +    N         
Sbjct: 154 SVRVDSLGSDKPGIKVDQLG-------SLAEMLSAKGRTLECFEVYCGSGNSLQGMIDIA 206

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDK-------DYPVKDFCQRLKEFSEKYSVQ--- 228
            +  +    HF      I+  GG  F  +        +  K + Q +++ + +  +    
Sbjct: 207 RQIFQMYLDHF-PTARSINFAGGHGFNYEKWSEAEKHFDWKTYFQAIRDLAAEMKIPETV 265

Query: 229 -IYLEPGEAIVTNTTTLNTTV-LDISENIKNLVIVDSSVEAHVPDYLLYQESAT------ 280
               EPG  ++ +   L T +  DI ++    ++V       +P   L   S        
Sbjct: 266 KFMFEPGRDVLADAGVLLTGIKRDIVQHSLGNIVVTDGSRMLMPSAQLRNRSHNTVFLDS 325

Query: 281 ----IYPNTGPYTAMVCGRSCLAGDIF--GEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
               I  ++    A V GRS L  D    GE    + VK G+ +   DV  Y   +   F
Sbjct: 326 AFNEIVNDSKRCNAKVRGRSILRNDYILPGEVVAPETVKAGEYMLILDVGAYCATQHMEF 385

Query: 335 NGINMPTIAVKNVDGTIKAIREFSYN-DYYNNL 366
             +      +   +G I  + +     D + NL
Sbjct: 386 LNVPPAGEVLVEANGAIYMVTKPGNELDKWRNL 418


>gi|311063677|ref|YP_003970402.1| diaminopimelate decarboxylase [Bifidobacterium bifidum PRL2010]
 gi|310865996|gb|ADP35365.1| LysA Diaminopimelate decarboxylase [Bifidobacterium bifidum
           PRL2010]
          Length = 542

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 70/259 (27%), Gaps = 34/259 (13%)

Query: 140 FSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEW 195
              L         S+   + G+  H          F      M+   +  +      +  
Sbjct: 280 GPALAVLKDILTRSDELELVGIHSHIGSNIHDADAFIQAAKRMMLLRKTFYATDAYTLPE 339

Query: 196 ISLGGGIHFTDKDYPVKDFCQ-----------RLKEFSEKYSVQIYLEPGEAIVTNTTTL 244
           + LGGG      D       +            +       +  I  EPG  IV      
Sbjct: 340 VDLGGGYSVAYTDGEDSMDVRVELRRLAEAVGAINRALGVPAPAISFEPGRWIVAPAGVT 399

Query: 245 NTTVLDISENI--------------KNLVIVDSSVEAHVPDYLLYQES----ATIYPNTG 286
              V  I                  +  V VD  +  ++   L   +     A    +  
Sbjct: 400 LYRVGTIKPVHLSDAKDKTGNPIDERVYVSVDGGMSDNIRPALYGADYTVRLANRRGSDE 459

Query: 287 PYTAMVCGRSCLAGDIFG-EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
                V G  C +GDI   E      ++ GD ++      Y     + +N   +P +   
Sbjct: 460 SMLVRVVGMHCESGDIIVHEDRLPADLRRGDILAVPVTGAYGRTMASNYNQALIPAVVAV 519

Query: 346 NVDGTIKAIREFSYNDYYN 364
           +  G    IR  + +D  +
Sbjct: 520 SEAGAHVMIRRQTIDDLLD 538



 Score = 79.4 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 20/154 (12%), Positives = 44/154 (28%), Gaps = 9/154 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
            +P YLID  ++                N+   +  A K F +  +   +        + 
Sbjct: 45  GSPLYLIDTDEVSARARYFVRAAADAFTNSTTHVSFAGKAFLSKEVVRLVIDAGMLVDTC 104

Query: 59  SLYEVMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           S+ E+ +       G     +   K        +      I+ +   +  +    A++L 
Sbjct: 105 SMGEMRIALAAGVPGRRLVLHGNNKSDAEIELAIEQGFAKIVVDEPGEPARIAAIARRLG 164

Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKC 147
           K+    LR+   +               + G   
Sbjct: 165 KRARVMLRVTAGIHAGGHEYISTAHEDQKFGVPL 198


>gi|310286781|ref|YP_003938039.1| diaminopimelate decarboxylase [Bifidobacterium bifidum S17]
 gi|309250717|gb|ADO52465.1| diaminopimelate decarboxylase [Bifidobacterium bifidum S17]
          Length = 548

 Score =  107 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 70/259 (27%), Gaps = 34/259 (13%)

Query: 140 FSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEW 195
              L         S+   + G+  H          F      M+   +  +      +  
Sbjct: 286 GPALAVLKDILTRSDELELVGIHSHIGSNIHDADAFIQAAKRMMLLRKTFYATDAYTLPE 345

Query: 196 ISLGGGIHFTDKDYPVKDFCQ-----------RLKEFSEKYSVQIYLEPGEAIVTNTTTL 244
           + LGGG      D       +            +       +  I  EPG  IV      
Sbjct: 346 VDLGGGYSVAYTDGEDSMDVRVELRRLAEAVGAINRALGVPAPAISFEPGRWIVAPAGVT 405

Query: 245 NTTVLDISENI--------------KNLVIVDSSVEAHVPDYLLYQES----ATIYPNTG 286
              V  I                  +  V VD  +  ++   L   +     A    +  
Sbjct: 406 LYRVGTIKPVHLSDAKDKTGNPIDERVYVSVDGGMSDNIRPALYGADYTVRLANRRGSDE 465

Query: 287 PYTAMVCGRSCLAGDIFG-EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
                V G  C +GDI   E      ++ GD ++      Y     + +N   +P +   
Sbjct: 466 SMLVRVVGMHCESGDIIVHEDRLPADLRRGDILAVPVTGAYGRTMASNYNQALIPAVVAV 525

Query: 346 NVDGTIKAIREFSYNDYYN 364
           +  G    IR  + +D  +
Sbjct: 526 SEAGAHVMIRRQTIDDLLD 544



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 20/154 (12%), Positives = 44/154 (28%), Gaps = 9/154 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
            +P YLID  ++                N+   +  A K F +  +   +        + 
Sbjct: 51  GSPLYLIDTDEVSARARYFVRAAADAFTNSTTHVSFAGKAFLSKEVVRLVTDAGMLVDTC 110

Query: 59  SLYEVMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           S+ E+ +       G     +   K        +      I+ +   +  +    A++L 
Sbjct: 111 SMGEMRIVLAAGVPGRRLVLHGNNKSDAEIELAIEQGFAKIVVDEPDEPARIAAIARRLG 170

Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKC 147
           K+    LR+   +               + G   
Sbjct: 171 KRARVMLRVTAGIHAGGHEYISTAHEDQKFGVPL 204


>gi|255524070|ref|ZP_05391031.1| Diaminopimelate decarboxylase [Clostridium carboxidivorans P7]
 gi|255512207|gb|EET88486.1| Diaminopimelate decarboxylase [Clostridium carboxidivorans P7]
          Length = 238

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 68/208 (32%), Gaps = 16/208 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y++D+  + +         +  G++  ++ A K F    +   + +        S 
Sbjct: 30  GTPLYVVDEDLVRSTCREFKDNFEIEGIESEVIYASKAFLNLAIAKVICEEGLSLDVVSG 89

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHK- 116
            E+       F       +   K       A+ +    I+ +  ++L   +   + L+K 
Sbjct: 90  GELYTALKANFPVSRIYMHGNNKTEGELSMAIEAGIGRIVVDNRNELEVIEYLCKSLNKK 149

Query: 117 -KIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNN 166
             + LR+NP +          ++  S+ GE   D            SE  N  G   H  
Sbjct: 150 VDVLLRVNPGIEAHTHEYIQTSKNDSKFGESIFDEDMCKIINRFQNSESVNFKGFHCHIG 209

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIE 194
            +      F + + ++ K        + 
Sbjct: 210 SQIFEEKSFYSEVSDMIKFLEKIKKSMR 237


>gi|313139481|ref|ZP_07801674.1| diaminopimelate decarboxylase [Bifidobacterium bifidum NCIMB 41171]
 gi|313131991|gb|EFR49608.1| diaminopimelate decarboxylase [Bifidobacterium bifidum NCIMB 41171]
          Length = 519

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 69/259 (26%), Gaps = 34/259 (13%)

Query: 140 FSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEW 195
              L         S+   + G+  H          F      M+   +  +      +  
Sbjct: 257 GPALAVLKDILTRSDELELVGIHSHIGSNIHDADAFIQAAKRMMLLRKTFYATDAYTLPE 316

Query: 196 ISLGGGIHFTDKDYPVKDFCQ-----------RLKEFSEKYSVQIYLEPGEAIVTNTTTL 244
           + LGGG      D       +            +       +  I  EPG  IV      
Sbjct: 317 VDLGGGYSVAYTDGEDSMDVRVELRRLAEAVGAINRALGVPAPAISFEPGRWIVAPAGVT 376

Query: 245 NTTVLDISENI--------------KNLVIVDSSVEAHVPDYLLYQES----ATIYPNTG 286
              V  I                  +  V VD  +  ++   L   +     A    +  
Sbjct: 377 LYRVGTIKPVHLSDAKDKTGNPIDERVYVSVDGGMSDNIRPALYGADYTVRLANRRGSDE 436

Query: 287 PYTAMVCGRSCLAGDIFG-EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
                V G  C +GDI   E      ++ GD ++      Y     + +N   +P +   
Sbjct: 437 SMLVRVVGMHCESGDIIVHEDRLPADLRRGDILAVPVTGAYGRTMASNYNQALIPAVVAV 496

Query: 346 NVDGTIKAIREFSYNDYYN 364
              G    IR  + +D  +
Sbjct: 497 TEAGAHVMIRRQTIDDLLD 515



 Score = 79.4 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 20/154 (12%), Positives = 45/154 (29%), Gaps = 9/154 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
            +P YLID  ++                N+   +  A K F +  +   +        + 
Sbjct: 22  GSPLYLIDTDEVSARARYFVRAAADAFTNSTTHVSFAGKAFLSKEVVRLVTDAGMLVDTC 81

Query: 59  SLYEVMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           S+ E+ +       G     +   K        +      I+ +   + ++    A++L 
Sbjct: 82  SMGEMRIALAAGVPGRRLVLHGNNKSDAEIELAIEQGFAKIVVDEPDEPSRIAAIARRLG 141

Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKC 147
           K+    LR+   +               + G   
Sbjct: 142 KRARVMLRVTAGIHAGGHEYISTAHEDQKFGVPL 175


>gi|224282335|ref|ZP_03645657.1| diaminopimelate decarboxylase [Bifidobacterium bifidum NCIMB 41171]
          Length = 537

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 69/259 (26%), Gaps = 34/259 (13%)

Query: 140 FSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEW 195
              L         S+   + G+  H          F      M+   +  +      +  
Sbjct: 275 GPALAVLKDILTRSDELELVGIHSHIGSNIHDADAFIQAAKRMMLLRKTFYATDAYTLPE 334

Query: 196 ISLGGGIHFTDKDYPVKDFCQ-----------RLKEFSEKYSVQIYLEPGEAIVTNTTTL 244
           + LGGG      D       +            +       +  I  EPG  IV      
Sbjct: 335 VDLGGGYSVAYTDGEDSMDVRVELRRLAEAVGAINRALGVPAPAISFEPGRWIVAPAGVT 394

Query: 245 NTTVLDISENI--------------KNLVIVDSSVEAHVPDYLLYQES----ATIYPNTG 286
              V  I                  +  V VD  +  ++   L   +     A    +  
Sbjct: 395 LYRVGTIKPVHLSDAKDKTGNPIDERVYVSVDGGMSDNIRPALYGADYTVRLANRRGSDE 454

Query: 287 PYTAMVCGRSCLAGDIFG-EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
                V G  C +GDI   E      ++ GD ++      Y     + +N   +P +   
Sbjct: 455 SMLVRVVGMHCESGDIIVHEDRLPADLRRGDILAVPVTGAYGRTMASNYNQALIPAVVAV 514

Query: 346 NVDGTIKAIREFSYNDYYN 364
              G    IR  + +D  +
Sbjct: 515 TEAGAHVMIRRQTIDDLLD 533



 Score = 79.4 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 20/154 (12%), Positives = 45/154 (29%), Gaps = 9/154 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
            +P YLID  ++                N+   +  A K F +  +   +        + 
Sbjct: 40  GSPLYLIDTDEVSARARYFVRAAADAFTNSTTHVSFAGKAFLSKEVVRLVTDAGMLVDTC 99

Query: 59  SLYEVMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           S+ E+ +       G     +   K        +      I+ +   + ++    A++L 
Sbjct: 100 SMGEMRIALAAGVPGRRLVLHGNNKSDAEIELAIEQGFAKIVVDEPDEPSRIAAIARRLG 159

Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKC 147
           K+    LR+   +               + G   
Sbjct: 160 KRARVMLRVTAGIHAGGHEYISTAHEDQKFGVPL 193


>gi|163757172|ref|ZP_02164274.1| diaminopimelate decarboxylase [Kordia algicida OT-1]
 gi|161322900|gb|EDP94247.1| diaminopimelate decarboxylase [Kordia algicida OT-1]
          Length = 124

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 32/104 (30%), Gaps = 4/104 (3%)

Query: 265 VEAHVPDYLL--YQESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321
               +   L   Y     I    G      V G  C   D FG       ++ GD + F 
Sbjct: 3   FNHLIRPMLYNSYHHIENISNPAGRERYYSVVGYICET-DTFGNNRRISEIREGDILKFN 61

Query: 322 DVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN 365
           +   Y  +  + +N    P   +   +      +  +++D   N
Sbjct: 62  NAGAYCFSMASNYNSRYRPAEVLWFNNEAHLIRKRETFDDILKN 105


>gi|332808532|ref|XP_524555.3| PREDICTED: arginine decarboxylase [Pan troglodytes]
          Length = 392

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 47/366 (12%), Positives = 113/366 (30%), Gaps = 64/366 (17%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++       +++    V+    +KC ++ G+   L Q   G + +       
Sbjct: 41  FFVADLGAIVR--KHFCFLKCLPRVQPFYTVKCNSSPGVLKVLAQLGLGFSCA------- 91

Query: 66  GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPS 125
                            +        +       +           Q+    +   +   
Sbjct: 92  -------------NKLCEAHSRRDCRSTVEETMGS-----AIWFVQQRGTACLIRMVLCI 133

Query: 126 VSYSKFILADPNRPFSRLGEKCKDKIESEIKN---VNGLMFHNNCENKSFLCFSAMLKNI 182
            +     L+  +  F    + C+  +E+  KN   V G+ FH          ++  + + 
Sbjct: 134 ATDDSHSLSCLSLKFGVSLKSCRHLLENAKKNHAEVVGVSFHIGSGCPDPQAYAQSIADA 193

Query: 183 EKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEP 233
              F        ++  + LGGG   T+      +    +        F E   V I+ E 
Sbjct: 194 RLVFEMGTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEGCGVDIFAEL 253

Query: 234 GEAIVTNTTTLNTTVLDI-----------------------SENIKNLVIVDSSVEAHVP 270
           G   VT+  T+  +++                           +     I +S +  ++ 
Sbjct: 254 GRYYVTSAFTVAVSIIAKKEVLLDQPGREEENGSTSKTIVYHLDEGVYGIFNSVLFDNIC 313

Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
              + Q+  +       Y++ + G +    D   E  +   + +GD + F+++  Y +  
Sbjct: 314 PTPILQKKPSTEQP--LYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNMGAYTVGM 371

Query: 331 KNWFNG 336
            + F G
Sbjct: 372 GSPFGG 377


>gi|325180947|emb|CCA15357.1| pyridoxaldependent decarboxylase putative [Albugo laibachii Nc14]
          Length = 1659

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 54/399 (13%), Positives = 111/399 (27%), Gaps = 53/399 (13%)

Query: 8    LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67
            + D   + + + +          +   A+K            +   G   +S+ EV    
Sbjct: 1244 VYDLNAIDSAIQSLKSSFP-THFEHRFAMKTCPLSFFIKKAIENHIGIECASVIEVKHAL 1302

Query: 68   E-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI------- 118
                      Y +      E+   LS    +  +   +L+   +      +         
Sbjct: 1303 RLGCPPHQIVYNSPCKTRNELAFALSAGVDVNADNFEELDIITELVLACFQPESKLDQIP 1362

Query: 119  --GLRINPSVSYSKFILADPNRPFSRLGEKC-----KDKI--ESEIKNVNGLMFHNNCEN 169
               LRINP V      +   +   S+ G           I    + + + GL  H   + 
Sbjct: 1363 RICLRINPLVGAGHNAILSTSTRTSKFGVTLTTENRARIITYFRDNQWLAGLHCHVGSQG 1422

Query: 170  KSFLCFSAMLKNIEK------EFGHFITQIEWISLGGGIHFTDK----DYPVKDFCQRLK 219
             S    +     + +             +I  +++GGG+              ++   LK
Sbjct: 1423 CSLELLAKGAAALCELSDDIERLTSTSKRIRVLNIGGGLPVNYSASESTPTFAEYANVLK 1482

Query: 220  EF----SEKYSVQIYLEPGEAIVTNTTTLNTTVLD-----------ISENIKNLVIVDSS 264
            +      +K    I  E G++I   +  + T V             I E      IV + 
Sbjct: 1483 KCAPQLFDKNDRTIITEFGQSISAKSGWIVTQVEYVKSLGEDTLSEIPEAAYQTAIVHAG 1542

Query: 265  VEAHVP--------DYLLYQESATIYPNTGPYT-AMVCGRSCLAGDIFGEFHFEKPVKIG 315
             +  +            +    A    +        + G  C  GD+ G       ++  
Sbjct: 1543 SDLFLRACYRPDLFPVRISVYQANGNASENEEMLQNIAGPLCFGGDLVGRSILVPRIERN 1602

Query: 316  DRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
            D +   D     I+  +       P +   + DG  + +
Sbjct: 1603 DLLVMHDTGANTISLFSRHCSRAAPCVYGYHTDGNGELV 1641


>gi|307702981|ref|ZP_07639928.1| protein tabA [Streptococcus oralis ATCC 35037]
 gi|307623374|gb|EFO02364.1| protein tabA [Streptococcus oralis ATCC 35037]
          Length = 321

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 41/297 (13%), Positives = 84/297 (28%), Gaps = 26/297 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +             N G K   A+K      +   L +   G   SS  
Sbjct: 19  PTPFHLYDEKGIREKARAVNQAFSWNKGFKEYFAVKATPTPAILKILKEEGCGVDCSSYV 78

Query: 62  EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+++ H+  F G    ++     D E         TI  +    +   +  A        
Sbjct: 79  ELLMSHKLDFPGSEIMFSSNNTPDKEYAYARELGATINLDAFEDIEHLERAAGIPEIISC 138

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE---------SEIKNVN-GLMFHNNCEN 169
                 V      + D     ++ G       E         ++   ++  L  +     
Sbjct: 139 RYNPGGVFELGTDIMDNPG-EAKFGMTKDQLFEAFAILKEKGAKTFGIHSFLASNTVTHL 197

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ- 228
                   + +   +        +++I+L GGI    +     +    + E   K   + 
Sbjct: 198 YYPELARQLFELAVEIKEKLGISLDFINLSGGIGVNYRPDQEPNDIAVIGEGVRKVYEEV 257

Query: 229 ----------IYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLL 274
                     I+ E G  ++     L T V    +        +     +  P  + 
Sbjct: 258 LTPAGLGQVKIFTELGRFMLAPHGALVTRVTHKKKPTVPIWAWMHQQSTSCAPPCME 314


>gi|255023624|ref|ZP_05295610.1| diaminopimelate decarboxylase [Listeria monocytogenes FSL J1-208]
          Length = 117

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 15/108 (13%), Positives = 32/108 (29%), Gaps = 5/108 (4%)

Query: 265 VEAHVPDYLLYQESATIYPNT----GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
           +  ++   L       +           T  + G+ C +GD+            G+ ++ 
Sbjct: 9   MSDNIRPALYDAHYDAVLAANPEKVAEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAV 68

Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNN-LS 367
                Y     + +N I  P +           +   +Y +   N LS
Sbjct: 69  FCTGAYGYAMASNYNRIPRPPVVFVENGIDKLIVARETYENLVQNDLS 116


>gi|320459348|dbj|BAJ69969.1| putative diaminopimelate decarboxylase [Bifidobacterium longum
           subsp. infantis ATCC 15697]
          Length = 518

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 67/249 (26%), Gaps = 34/249 (13%)

Query: 150 KIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFT 205
               ++  + G   H          F      M+   +  +      +  I LGGG    
Sbjct: 265 LANQDVLELVGAHSHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVA 324

Query: 206 DKDYPVKDFCQR-----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254
             D                            +  I  EPG  IV         V  I   
Sbjct: 325 YTDGEDSMDIDVELTRLADAVNSTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGAIKHV 384

Query: 255 I--------------KNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRS 296
                          +  V VD  +  ++   L   +     A    +     A VCG  
Sbjct: 385 HLSDVKDSAGNPIAERVYVSVDGGMSDNIRPALYGADYTARLANRTGSAETMLARVCGMH 444

Query: 297 CLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           C +GDI          +K GD ++      Y     + +N   +P +   +  G    +R
Sbjct: 445 CESGDIVVHEVQLPADLKRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSESGAHVMLR 504

Query: 356 EFSYNDYYN 364
             + +D  N
Sbjct: 505 RQTVDDLLN 513



 Score = 79.8 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 21/157 (13%), Positives = 47/157 (29%), Gaps = 9/157 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
            +P YLID  +++                +   +  A K F +  +   + +      + 
Sbjct: 22  GSPLYLIDTDEVVARARHFVRAAAEAFDTSTTHVSFAGKAFLSKEVVRLVTEAGMFVDTC 81

Query: 59  SLYEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           ++ E+ +       G     +   K  E    A+      I+ +   +  +    A++L 
Sbjct: 82  TMGEMKIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKIVIDEPDEPERVAAIARRLG 141

Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKCKDK 150
           K+    LR+   V               + G      
Sbjct: 142 KRARVMLRVTVGVHAGGHEYISTAHEDQKFGVPLLAA 178


>gi|296454952|ref|YP_003662096.1| diaminopimelate decarboxylase [Bifidobacterium longum subsp. longum
           JDM301]
 gi|296184384|gb|ADH01266.1| diaminopimelate decarboxylase [Bifidobacterium longum subsp. longum
           JDM301]
          Length = 530

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 67/249 (26%), Gaps = 34/249 (13%)

Query: 150 KIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFT 205
               ++  + G   H          F      M+   +  +      +  I LGGG    
Sbjct: 277 LANQDVLELVGAHSHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVA 336

Query: 206 DKDYPVKDFCQR-----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254
             D                            +  I  EPG  IV         V  I   
Sbjct: 337 YTDGEDSMDIDVELTRLADAVNSTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGAIKHV 396

Query: 255 I--------------KNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRS 296
                          +  V VD  +  ++   L   +     A    +     A VCG  
Sbjct: 397 HLSDAKDSAGNPITERVYVSVDGGMSDNIRPALYGADYTARLANRTGSAETMLARVCGMH 456

Query: 297 CLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           C +GDI          +K GD ++      Y     + +N   +P +   +  G    +R
Sbjct: 457 CESGDIVVHEVQLPADLKRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSESGAHVMLR 516

Query: 356 EFSYNDYYN 364
             + +D  N
Sbjct: 517 RQTVDDLLN 525



 Score = 78.3 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 46/157 (29%), Gaps = 9/157 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
            +P YLID  ++                 +   +  A K F +  +   + +      + 
Sbjct: 34  GSPLYLIDTDEVSARAKHFVRAAAEAFNTSTTHVSFAGKAFLSKEIVRLVTEAGMFVDTC 93

Query: 59  SLYEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           ++ E+ +       G     +   K  E    A+      I+ +   +  +    A+KL 
Sbjct: 94  TMGEMKIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKIVIDEPDEPERVAAIARKLG 153

Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKCKDK 150
           K+    LR+   V               + G      
Sbjct: 154 KRARVMLRVTVGVHAGGHEYISTAHEDQKFGVPLLAA 190


>gi|213693167|ref|YP_002323753.1| diaminopimelate decarboxylase [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|213524628|gb|ACJ53375.1| diaminopimelate decarboxylase [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 530

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 67/249 (26%), Gaps = 34/249 (13%)

Query: 150 KIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFT 205
               ++  + G   H          F      M+   +  +      +  I LGGG    
Sbjct: 277 LANQDVLELVGAHSHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVA 336

Query: 206 DKDYPVKDFCQR-----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254
             D                            +  I  EPG  IV         V  I   
Sbjct: 337 YTDGEDSMDIDVELTRLADAVNSTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGAIKHV 396

Query: 255 I--------------KNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRS 296
                          +  V VD  +  ++   L   +     A    +     A VCG  
Sbjct: 397 HLSDVKDSAGNPIAERVYVSVDGGMSDNIRPALYGADYTARLANRTGSAETMLARVCGMH 456

Query: 297 CLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           C +GDI          +K GD ++      Y     + +N   +P +   +  G    +R
Sbjct: 457 CESGDIVVHEVQLPADLKRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSESGAHVMLR 516

Query: 356 EFSYNDYYN 364
             + +D  N
Sbjct: 517 RQTVDDLLN 525



 Score = 79.8 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 21/157 (13%), Positives = 47/157 (29%), Gaps = 9/157 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
            +P YLID  +++                +   +  A K F +  +   + +      + 
Sbjct: 34  GSPLYLIDTDEVVARARHFVRAAAEAFDTSTTHVSFAGKAFLSKEVVRLVTEAGMFVDTC 93

Query: 59  SLYEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           ++ E+ +       G     +   K  E    A+      I+ +   +  +    A++L 
Sbjct: 94  TMGEMKIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKIVIDEPDEPERVAAIARRLG 153

Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKCKDK 150
           K+    LR+   V               + G      
Sbjct: 154 KRARVMLRVTVGVHAGGHEYISTAHEDQKFGVPLLAA 190


>gi|189440468|ref|YP_001955549.1| diaminopimelate decarboxylase [Bifidobacterium longum DJO10A]
 gi|189428903|gb|ACD99051.1| Diaminopimelate decarboxylase [Bifidobacterium longum DJO10A]
          Length = 530

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 67/249 (26%), Gaps = 34/249 (13%)

Query: 150 KIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFT 205
               ++  + G   H          F      M+   +  +      +  I LGGG    
Sbjct: 277 LANQDVLELVGAHSHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVA 336

Query: 206 DKDYPVKDFCQR-----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254
             D                            +  I  EPG  IV         V  I   
Sbjct: 337 YTDGEDSMDIDVELTRLADAVNSTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGAIKHV 396

Query: 255 I--------------KNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRS 296
                          +  V VD  +  ++   L   +     A    +     A VCG  
Sbjct: 397 HLSDAKDSAGNPIAERVYVSVDGGMSDNIRPALYGADYTARLANRTGSAETMLARVCGMH 456

Query: 297 CLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           C +GDI          +K GD ++      Y     + +N   +P +   +  G    +R
Sbjct: 457 CESGDIVVHEVQLPADLKRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSESGAHVMLR 516

Query: 356 EFSYNDYYN 364
             + +D  N
Sbjct: 517 RQTVDDLLN 525



 Score = 79.4 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 21/157 (13%), Positives = 47/157 (29%), Gaps = 9/157 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
            +P YLID  +++                +   +  A K F +  +   + +      + 
Sbjct: 34  GSPLYLIDTDEVVARARHFVRAAAEAFNTSTTHVSFAGKAFLSKEVVRLVTEAGMFVDTC 93

Query: 59  SLYEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           ++ E+ +       G     +   K  E    A+      I+ +   +  +    A++L 
Sbjct: 94  TMGEMKIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKIVIDEPDEPERVAAIARRLG 153

Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKCKDK 150
           K+    LR+   V               + G      
Sbjct: 154 KRARVMLRVTVGVHAGGHEYISTAHEDQKFGVPLLAA 190


>gi|46190675|ref|ZP_00121234.2| COG0019: Diaminopimelate decarboxylase [Bifidobacterium longum
           DJO10A]
          Length = 518

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 67/249 (26%), Gaps = 34/249 (13%)

Query: 150 KIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFT 205
               ++  + G   H          F      M+   +  +      +  I LGGG    
Sbjct: 265 LANQDVLELVGAHSHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVA 324

Query: 206 DKDYPVKDFCQR-----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254
             D                            +  I  EPG  IV         V  I   
Sbjct: 325 YTDGEDSMDIDVELTRLADAVNSTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGAIKHV 384

Query: 255 I--------------KNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRS 296
                          +  V VD  +  ++   L   +     A    +     A VCG  
Sbjct: 385 HLSDAKDSAGNPIAERVYVSVDGGMSDNIRPALYGADYTARLANRTGSAETMLARVCGMH 444

Query: 297 CLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           C +GDI          +K GD ++      Y     + +N   +P +   +  G    +R
Sbjct: 445 CESGDIVVHEVQLPADLKRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSESGAHVMLR 504

Query: 356 EFSYNDYYN 364
             + +D  N
Sbjct: 505 RQTVDDLLN 513



 Score = 79.4 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 21/157 (13%), Positives = 47/157 (29%), Gaps = 9/157 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
            +P YLID  +++                +   +  A K F +  +   + +      + 
Sbjct: 22  GSPLYLIDTDEVVARARHFVRAAAEAFNTSTTHVSFAGKAFLSKEVVRLVTEAGMFVDTC 81

Query: 59  SLYEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           ++ E+ +       G     +   K  E    A+      I+ +   +  +    A++L 
Sbjct: 82  TMGEMKIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKIVIDEPDEPERVAAIARRLG 141

Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKCKDK 150
           K+    LR+   V               + G      
Sbjct: 142 KRARVMLRVTVGVHAGGHEYISTAHEDQKFGVPLLAA 178


>gi|213513938|ref|NP_001133877.1| Antizyme inhibitor 1 [Salmo salar]
 gi|209155670|gb|ACI34067.1| Antizyme inhibitor 1 [Salmo salar]
          Length = 449

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 49/377 (12%), Positives = 107/377 (28%), Gaps = 35/377 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   L+               +   A++  ++  + + L     G   ++ YE+ L
Sbjct: 40  FFVADLGVLMRQHVRWRTHMPQM--RPFYAVQANSSLAVIEILAALSTGFICTNKYELEL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                   E   Y+   K       A  +  D ++ +  ++L K          K+ L +
Sbjct: 98  VQGYGVPSEDIIYSGVCKQLSQIKYAAKNGIDFLVCDNEAELRKIAR--CHPRAKLLLEV 155

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
               S     +        +      +  +     V G+ FH          +S  + + 
Sbjct: 156 ATEASSEGEEMGMMFGSKLKDCRHLLESAKELGLQVVGVRFHVPSTCDDPQAYSHAVSDA 215

Query: 183 EKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC--QRLKEFSEKYSVQIYL-EPGEA 236
              F         +  + +GGG + ++      +      L  +    S    + EPG  
Sbjct: 216 RCVFDMGEDIGFSMTILDIGGGFNGSETQLKQINSAVRPLLDLYFPASSGVSIMAEPGSY 275

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY-------------------QE 277
            V+++ TL   ++      ++L         +     LY                     
Sbjct: 276 YVSSSFTLAVNIIAKEVGARDLHGNHDEPSPNDEPEFLYYMNDGVYGSFTSKLADNVIPA 335

Query: 278 SATIYPNTGPYTAM---VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
            A               + G S    D   +      + +GD + F +   Y +  ++ F
Sbjct: 336 PALPKSGVSEEPVFASSLWGPSGDELDQVVDQCLLPELSVGDWLIFNNAGAYCLGPQSTF 395

Query: 335 NGINMPTIAVKNVDGTI 351
                P +      G  
Sbjct: 396 TDSTRPPVYYTISTGDW 412


>gi|303249621|ref|ZP_07335827.1| hypothetical protein APP6_1029 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|302651554|gb|EFL81704.1| hypothetical protein APP6_1029 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 201

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 47/150 (31%), Gaps = 5/150 (3%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +   + + + +   G    S  E
Sbjct: 26  GTPAYIYSRATLERHWHAFDKAFGAHPHLICFAVKSNSNIALLNVMVRLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +              ++   K       A+          ++++L++  + A +L K   
Sbjct: 86  LERVLAAGGEPSKVVFSGVAKSHSEIQRALEVGIRCFNIESIAELHRINEVAGQLGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKC 147
           I LR+NP V              ++ G   
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENKFGVSV 175


>gi|294634823|ref|ZP_06713346.1| diaminopimelate decarboxylase [Edwardsiella tarda ATCC 23685]
 gi|291091759|gb|EFE24320.1| diaminopimelate decarboxylase [Edwardsiella tarda ATCC 23685]
          Length = 305

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/289 (15%), Positives = 94/289 (32%), Gaps = 29/289 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   +   +DT           +  A K  +   +   + Q      + SL E
Sbjct: 25  GTPLWIYDAGVISRQIDTLRQFD-----TIRFAQKACSNLHILRLMRQAGVRVDAVSLGE 79

Query: 63  VMLG-HEKF--GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
           +       F  GG+   +     D      +      +   +   L +  ++A      +
Sbjct: 80  IERALLAGFQPGGDEIVFTADVIDEATLDRVCALAIPVNAGSCDMLRQLGERA--PGHPV 137

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCENKSF 172
            LRINP   +      +     S+ G   +D       I++    + GL  H       +
Sbjct: 138 WLRINPGFGHGHSQKTNTGGENSKHGIWHQDLDQALALIDAYDLRLVGLHMHIGSGVD-Y 196

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------DYPVKDFCQRLKEFSE 223
              + +   +  +       I+ IS GGG+    +          Y       R +  + 
Sbjct: 197 DHLARVCDTLANQAIALGRDIQAISAGGGLSIPYRADEQSVDVTHYFGLWDAARRRIAAH 256

Query: 224 -KYSVQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDSSVEAHVP 270
             + V++ +EPG  +V  +  L   V  +     ++ V+ D+     + 
Sbjct: 257 LGHPVRLEIEPGRYLVAQSGLLMAEVRAVKTMGQRHFVLADAGFNDLMR 305


>gi|167901191|ref|ZP_02488396.1| pyridoxal-dependent decarboxylase family protein [Burkholderia
           pseudomallei NCTC 13177]
          Length = 398

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 58/378 (15%), Positives = 113/378 (29%), Gaps = 37/378 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60
           + TP Y+ D Q +L +           G +L+++LK  +   +     + + DG   +S 
Sbjct: 25  LDTPCYVFDPQCVLASYAALRAAL---GTRLVVSLKANSHADLFLRCAHAFEDGIELASQ 81

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+     +     +  N A  D  + A +++    I +    + +F   A     +  +
Sbjct: 82  GELDTVVGRGKHVKYLNNPAMGDALMRAGIASRCHFILDGPDMVRRFIALASGKETEDVM 141

Query: 121 RINPSVS----YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF- 175
               + +    ++   L D             + +    + V GL       N       
Sbjct: 142 LRINAGALLGAHAPKSLRDHFGMTPAEALGMANLLTQAGRRVAGLHAFVGSGNFRAGPTK 201

Query: 176 --SAMLKNIEKEFGHFITQIE--------WISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
              A   ++         QIE         ++LGGG      D    +  +       K 
Sbjct: 202 GGDADSADLAWALAQLAEQIEALVRAPVTHLNLGGGFSEKGHDDATFERYRARIAPLAKR 261

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------------D 271
              ++ E G AI  N     T V  +      ++ V     +H                 
Sbjct: 262 YTLVH-EAGRAIFANAGVFVTRVRAVKVWDDRVIAVCDGGMSHNFLLAKTEAVLKTWAAP 320

Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYNINR 330
            L+   +A  +           G +C   D+ G      +  + GD + F     Y+ + 
Sbjct: 321 TLVPAGTADAHRAPNARPITFVGNTCNRADVIGRLERHPRLPQPGDFVVFSQCGAYHHSY 380

Query: 331 K-NWFNGINMPTIAVKNV 347
             + F     P       
Sbjct: 381 TVSGFLSH-KPAQVYIRQ 397


>gi|317482967|ref|ZP_07941971.1| diaminopimelate decarboxylase [Bifidobacterium sp. 12_1_47BFAA]
 gi|316915574|gb|EFV36992.1| diaminopimelate decarboxylase [Bifidobacterium sp. 12_1_47BFAA]
          Length = 530

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 67/249 (26%), Gaps = 34/249 (13%)

Query: 150 KIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFT 205
               ++  + G   H          F      M+   +  +      +  I LGGG    
Sbjct: 277 LANQDVLELVGAHSHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVA 336

Query: 206 DKDYPVKDFCQR-----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254
             D                            +  I  EPG  IV         V  I   
Sbjct: 337 YTDGEDSMDIDVELTRLADAVNSTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGTIKHV 396

Query: 255 I--------------KNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRS 296
                          +  V VD  +  ++   L   +     A    +     A VCG  
Sbjct: 397 HLSDAKDSDGNPIAERVYVSVDGGMSDNIRPALYGADYTARLANRTGSAETMLARVCGMH 456

Query: 297 CLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           C +GDI          +K GD ++      Y     + +N   +P +   +  G    +R
Sbjct: 457 CESGDIVVHEVQLPADLKRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSESGAHVMLR 516

Query: 356 EFSYNDYYN 364
             + +D  N
Sbjct: 517 RQTVDDLLN 525



 Score = 81.7 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 47/157 (29%), Gaps = 9/157 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
            +P YLID  +++                +   +  A K F +  +   + +      + 
Sbjct: 34  GSPLYLIDTDEVVARARHFVRAAAEAFNTSTTHVSFAGKAFLSKEIVRLVAEAGMFVDTC 93

Query: 59  SLYEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           ++ E+ +       G     +   K  E    A+      I+ +   +  +    A+KL 
Sbjct: 94  TMGEMKIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKIVIDEPDEPERVAAIARKLG 153

Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKCKDK 150
           K+    LR+   V               + G      
Sbjct: 154 KRARVMLRVTVGVHAGGHEYISTAHEDQKFGVPLLAA 190


>gi|312133790|ref|YP_004001129.1| lysa [Bifidobacterium longum subsp. longum BBMN68]
 gi|311773073|gb|ADQ02561.1| LysA [Bifidobacterium longum subsp. longum BBMN68]
          Length = 530

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 67/249 (26%), Gaps = 34/249 (13%)

Query: 150 KIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFT 205
               ++  + G   H          F      M+   +  +      +  I LGGG    
Sbjct: 277 LANQDVLELVGAHSHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVA 336

Query: 206 DKDYPVKDFCQR-----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254
             D                            +  I  EPG  IV         V  I   
Sbjct: 337 YTDGEDSMDIDVELTRLADAVNSTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGTIKHV 396

Query: 255 I--------------KNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRS 296
                          +  V VD  +  ++   L   +     A    +     A VCG  
Sbjct: 397 HLSDAKDSDGNPIAERVYVSVDGGMSDNIRPALYGADYTARLANRTGSAETMLARVCGMH 456

Query: 297 CLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           C +GDI          +K GD ++      Y     + +N   +P +   +  G    +R
Sbjct: 457 CESGDIVVHEVQLPADLKRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSESGAHVMLR 516

Query: 356 EFSYNDYYN 364
             + +D  N
Sbjct: 517 RQTVDDLLN 525



 Score = 79.4 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 47/157 (29%), Gaps = 9/157 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
            +P YLID  +++                +   +  A K F +  +   + +      + 
Sbjct: 34  GSPLYLIDTDEVVARARHFVRAAAEAFNTSTTHVSFAGKAFLSKEVVRLVTEAGMFVDTC 93

Query: 59  SLYEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           ++ E+ +       G     +   K  E    A+      I+ +   +  +    A+KL 
Sbjct: 94  TMGEMKIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKIVIDEPDEPERVAAIARKLG 153

Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKCKDK 150
           K+    LR+   V               + G      
Sbjct: 154 KRARVMLRVTVGVHAGGHEYISTAHEDQKFGVPLLAA 190


>gi|239620903|ref|ZP_04663934.1| diaminopimelate decarboxylase [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|322690013|ref|YP_004209747.1| diaminopimelate decarboxylase [Bifidobacterium longum subsp.
           infantis 157F]
 gi|239516164|gb|EEQ56031.1| diaminopimelate decarboxylase [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|320461349|dbj|BAJ71969.1| putative diaminopimelate decarboxylase [Bifidobacterium longum
           subsp. infantis 157F]
          Length = 518

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 67/249 (26%), Gaps = 34/249 (13%)

Query: 150 KIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFT 205
               ++  + G   H          F      M+   +  +      +  I LGGG    
Sbjct: 265 LANQDVLELVGAHSHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVA 324

Query: 206 DKDYPVKDFCQR-----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254
             D                            +  I  EPG  IV         V  I   
Sbjct: 325 YTDGEDSMDIDVELTRLADAVNSTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGTIKHV 384

Query: 255 I--------------KNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRS 296
                          +  V VD  +  ++   L   +     A    +     A VCG  
Sbjct: 385 HLSDAKDSDGNPIAERVYVSVDGGMSDNIRPALYGADYTARLANRTGSAETMLARVCGMH 444

Query: 297 CLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           C +GDI          +K GD ++      Y     + +N   +P +   +  G    +R
Sbjct: 445 CESGDIVVHEVQLPADLKRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSESGAHVMLR 504

Query: 356 EFSYNDYYN 364
             + +D  N
Sbjct: 505 RQTVDDLLN 513



 Score = 79.4 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 47/157 (29%), Gaps = 9/157 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
            +P YLID  +++                +   +  A K F +  +   + +      + 
Sbjct: 22  GSPLYLIDTDEVVARARHFVRAAAEAFNTSTTHVSFAGKAFLSKEVVRLVTEAGMFVDTC 81

Query: 59  SLYEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           ++ E+ +       G     +   K  E    A+      I+ +   +  +    A+KL 
Sbjct: 82  TMGEMKIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKIVIDEPDEPERVAAIARKLG 141

Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKCKDK 150
           K+    LR+   V               + G      
Sbjct: 142 KRARVMLRVTVGVHAGGHEYISTAHEDQKFGVPLLAA 178


>gi|227547000|ref|ZP_03977049.1| diaminopimelate decarboxylase [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|227212532|gb|EEI80421.1| diaminopimelate decarboxylase [Bifidobacterium longum subsp.
           infantis ATCC 55813]
          Length = 532

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 67/249 (26%), Gaps = 34/249 (13%)

Query: 150 KIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFT 205
               ++  + G   H          F      M+   +  +      +  I LGGG    
Sbjct: 279 LANQDVLELVGAHSHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVA 338

Query: 206 DKDYPVKDFCQR-----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254
             D                            +  I  EPG  IV         V  I   
Sbjct: 339 YTDGEDSMDIDVELTRLADAVNSTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGTIKHV 398

Query: 255 I--------------KNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRS 296
                          +  V VD  +  ++   L   +     A    +     A VCG  
Sbjct: 399 HLSDAKDSDGNPIAERVYVSVDGGMSDNIRPALYGADYTARLANRTGSAETMLARVCGMH 458

Query: 297 CLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           C +GDI          +K GD ++      Y     + +N   +P +   +  G    +R
Sbjct: 459 CESGDIVVHEVQLPADLKRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSESGAHVMLR 518

Query: 356 EFSYNDYYN 364
             + +D  N
Sbjct: 519 RQTVDDLLN 527



 Score = 79.8 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 47/157 (29%), Gaps = 9/157 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
            +P YLID  +++                +   +  A K F +  +   + +      + 
Sbjct: 36  GSPLYLIDTDEVVARARHFVRAAAEAFNTSTTHVSFAGKAFLSKEIVRLVTEAGMFVDTC 95

Query: 59  SLYEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           ++ E+ +       G     +   K  E    A+      I+ +   +  +    A+KL 
Sbjct: 96  TMGEMKIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKIVIDEPDEPERVAAIARKLG 155

Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKCKDK 150
           K+    LR+   V               + G      
Sbjct: 156 KRARVMLRVTVGVHAGGHEYISTAHEDQKFGVPLLAA 192


>gi|23465835|ref|NP_696438.1| diaminopimelate decarboxylase [Bifidobacterium longum NCC2705]
 gi|23326532|gb|AAN25074.1| probable diaminopimelate decarboxylase [Bifidobacterium longum
           NCC2705]
          Length = 530

 Score =  105 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 67/249 (26%), Gaps = 34/249 (13%)

Query: 150 KIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFT 205
               ++  + G   H          F      M+   +  +      +  I LGGG    
Sbjct: 277 LANQDVLELVGAHSHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVA 336

Query: 206 DKDYPVKDFCQR-----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254
             D                            +  I  EPG  IV         V  I   
Sbjct: 337 YTDGEDSMDIDVELTRLADAVNSTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGTIKHV 396

Query: 255 I--------------KNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRS 296
                          +  V VD  +  ++   L   +     A    +     A VCG  
Sbjct: 397 HLSDAKDSDGNPIAERVYVSVDGGMSDNIRPALYGADYTARLANRTGSAETMLARVCGMH 456

Query: 297 CLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           C +GDI          +K GD ++      Y     + +N   +P +   +  G    +R
Sbjct: 457 CESGDIVVHEVQLPADLKRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSESGAHVMLR 516

Query: 356 EFSYNDYYN 364
             + +D  N
Sbjct: 517 RQTVDDLLN 525



 Score = 79.4 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 47/157 (29%), Gaps = 9/157 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
            +P YLID  +++                +   +  A K F +  +   + +      + 
Sbjct: 34  GSPLYLIDTDEVVARARHFVRAAAEAFNTSTTHVSFAGKAFLSKEVVRLVTEAGMFVDTC 93

Query: 59  SLYEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           ++ E+ +       G     +   K  E    A+      I+ +   +  +    A+KL 
Sbjct: 94  TMGEMKIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKIVIDEPDEPERVAAIARKLG 153

Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKCKDK 150
           K+    LR+   V               + G      
Sbjct: 154 KRARVMLRVTVGVHAGGHEYISTAHEDQKFGVPLLAA 190


>gi|322510630|gb|ADX05944.1| putative ornithine decarboxylase [Organic Lake phycodnavirus 1]
          Length = 370

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 51/361 (14%), Positives = 119/361 (32%), Gaps = 33/361 (9%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT----LNQYMDGTTSSSLYE 62
           ++ D++ +L  ++      +   ++   A+KC  ++ +  T    +     G   +SL E
Sbjct: 22  WIYDEKNVLRQIEQWNK--QLPWIRPYYAMKCNPSYDLLKTLTTRMKYNNIGLCVASLQE 79

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
            +L  +     TH          +            N    ++  ++  Q + + + + I
Sbjct: 80  FLLAQKY----THNIIYTNPHMILYEKKHLFKLFNQNCFKVVDTMEELEQFIGRNVNVLI 135

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLK 180
             +        +   +      E  +    ++  N+N  G+  H   ++     +    K
Sbjct: 136 KMNSCNHNINSSLDTKFGCTSPEAYELIHYAKQHNINIRGVSVHIESKSNCKQSYIDAYK 195

Query: 181 NIEKEFGHFITQIEWI-----SLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
            +++   +      +       +GGG+ +      V  + + +         +I  E G 
Sbjct: 196 YVKQILEYLSMSCVYPEQPILDIGGGLLYNTNLEEVLGWTKYI-------HYEIIAETGR 248

Query: 236 AIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP------- 287
                +  L T ++      I     +   +  +  D+  + + A  Y +          
Sbjct: 249 YYAEPSYHLLTEIIAKTRRGIFLDNGIYHELNVYHRDHWEFPKLAYYYDHEKDSLEKVME 308

Query: 288 -YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
                + G +C + D  G   F K   +GD I  E++  Y       FNGI   +  + N
Sbjct: 309 YEDTRIFGPTCDSYDHMGICSFPKDYNMGDHIFLENMGAYTNAGSCNFNGILGASCVLFN 368

Query: 347 V 347
            
Sbjct: 369 K 369


>gi|310831136|ref|YP_003969779.1| putative ornithine decarboxylase [Cafeteria roenbergensis virus
           BV-PW1]
 gi|309386320|gb|ADO67180.1| putative ornithine decarboxylase [Cafeteria roenbergensis virus
           BV-PW1]
          Length = 354

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 54/322 (16%), Positives = 112/322 (34%), Gaps = 17/322 (5%)

Query: 30  VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAV 89
           +K   A+K F        L++Y  G   +SL E+    +    +  A         + A 
Sbjct: 29  IKPYYAIKSFQNQDFLKFLSKYDVGFDCASLEEINYVKDYNNSKIFANPTKSIRDILVAK 88

Query: 90  LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD 149
            +N + I+ +++ ++ K +      +  I +  +   S  +F       P     E   +
Sbjct: 89  NNNINDIVIDSIEEIQKIQSINFNPNYIIRITSDEIFSTIRFNKKFGAYPDE--VENIIN 146

Query: 150 KIESEIKNVNGLMFHNNCEN----KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFT 205
            I     N+ G  +H   +           + +L N   +  +       I +GGG    
Sbjct: 147 YISDNNLNLKGFSYHVGSKCSNMTSHVNSINIILNNYLPQCFYKNLTPNLIDIGGGFESD 206

Query: 206 DKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV---- 261
            +   +    Q L       ++++  EPG         + T ++ I E I + +      
Sbjct: 207 IQLLELNQKIQHLLPTLNNLNIKLIAEPGRLFSQGAVEVETEIIAIRERIIDNIKTLYLT 266

Query: 262 -----DSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGD 316
                  S +  + D   +        +       + G++C + D+  E       K+GD
Sbjct: 267 INDSVYHSFQGKIFDGQSFNPLPCYQSDE-LIRCFIFGQTCDSLDLIVENCIMPYPKLGD 325

Query: 317 RISFEDVAGYNINRKN-WFNGI 337
           +I F+++  Y++      FNG 
Sbjct: 326 KIIFKNMGAYSLASATGNFNGF 347


>gi|126439778|ref|YP_001057577.1| pyridoxal-dependent decarboxylase family protein [Burkholderia
           pseudomallei 668]
 gi|126453032|ref|YP_001064825.1| pyridoxal-dependent decarboxylase family protein [Burkholderia
           pseudomallei 1106a]
 gi|167844188|ref|ZP_02469696.1| pyridoxal-dependent decarboxylase family protein [Burkholderia
           pseudomallei B7210]
 gi|242316206|ref|ZP_04815222.1| putative pyridoxal-dependent decarboxylase [Burkholderia
           pseudomallei 1106b]
 gi|254196485|ref|ZP_04902909.1| pyridoxal-dependent decarboxylase family protein [Burkholderia
           pseudomallei S13]
 gi|254296043|ref|ZP_04963500.1| pyridoxal-dependent decarboxylase family protein [Burkholderia
           pseudomallei 406e]
 gi|126219271|gb|ABN82777.1| pyridoxal-dependent decarboxylase family protein [Burkholderia
           pseudomallei 668]
 gi|126226674|gb|ABN90214.1| putative pyridoxal-dependent decarboxylase [Burkholderia
           pseudomallei 1106a]
 gi|157805839|gb|EDO83009.1| pyridoxal-dependent decarboxylase family protein [Burkholderia
           pseudomallei 406e]
 gi|169653228|gb|EDS85921.1| pyridoxal-dependent decarboxylase family protein [Burkholderia
           pseudomallei S13]
 gi|242139445|gb|EES25847.1| putative pyridoxal-dependent decarboxylase [Burkholderia
           pseudomallei 1106b]
          Length = 398

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 58/378 (15%), Positives = 113/378 (29%), Gaps = 37/378 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60
           + TP Y+ D Q +L +           G +L+++LK  +   +     + + DG   +S 
Sbjct: 25  LDTPCYVFDPQCVLASYAALRAAL---GTRLVVSLKANSHADLFLRCAHAFEDGIELASQ 81

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+     +     +  N A  D  + A +++    I +    + +F   A     +  +
Sbjct: 82  GELDTVVGRGKHVKYLNNPAMGDALMRAGIASRCHFILDGPDMVRRFIALASGKETEDVM 141

Query: 121 RINPSVS----YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF- 175
               + +    ++   L D             + +    + V GL       N       
Sbjct: 142 LRINAGALLGAHAPKSLRDHFGMTPAEALGMANLLTQAGRRVAGLHAFVGSGNFRAGPTK 201

Query: 176 --SAMLKNIEKEFGHFITQIE--------WISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
              A   ++         QIE         ++LGGG      D    +  +       K 
Sbjct: 202 GGDADSADLAWALAQLAEQIEALVRAPVTHLNLGGGFSEKGHDDATFERYRARIAPLAKR 261

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------------D 271
              ++ E G AI  N     T V  +      ++ V     +H                 
Sbjct: 262 YTLVH-EAGRAIFANAGVFVTRVRAVKVWDDRVIAVCDGGMSHNFLLAKTEAVLKTWAAP 320

Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYNINR 330
            L+   +A  +           G +C   D+ G      +  + GD + F     Y+ + 
Sbjct: 321 TLVPAGAADAHRAPNARPITFVGNTCNRADVIGRLERHPRLPQPGDFVVFSQCGAYHHSY 380

Query: 331 K-NWFNGINMPTIAVKNV 347
             + F     P       
Sbjct: 381 TVSGFLSH-KPAQVYIRQ 397


>gi|207722229|ref|YP_002252665.1| siderophore synthesis decarboxylase protein [Ralstonia solanacearum
           MolK2]
 gi|207728412|ref|YP_002256806.1| siderophore synthesis decarboxylase 'partial sequence n terminus)
           protein [Ralstonia solanacearum MolK2]
 gi|206587405|emb|CAQ17987.1| putative siderophore synthesis decarboxylase protein [Ralstonia
           solanacearum MolK2]
 gi|206591658|emb|CAQ57270.1| probable siderophore synthesis decarboxylase 'partial sequence n
           terminus) protein [Ralstonia solanacearum MolK2]
          Length = 364

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 75/273 (27%), Gaps = 28/273 (10%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            YL D   L              G +L  A+K  +   +   L+  + G   +SL EV  
Sbjct: 19  AYLYDLDHLRERAGRL-SAMLPPGCELFYAIKANSDAPVLAALDGAVAGYEVASLGEVAR 77

Query: 66  GHEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
             E        +    K             + I   +  QL +    A ++ ++  + + 
Sbjct: 78  AREVGAHARIVFGGPGKTDAELQCALERGVELIHVESELQLRRLDAVACRMGRRARVLLR 137

Query: 124 PSVS---------------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE 168
            + +                              + +  +         V GL  H    
Sbjct: 138 VNPNPLSADSAGKRPQGTLTMGGQPTQFGIEEDAVPDLIRLARGLAGVKVVGLHLHALSN 197

Query: 169 NKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRLKE 220
           N             L    +        ++ +++GGGI          +  + FC  L  
Sbjct: 198 NLDADSHLALVRHYLALALRLRREHGLTLDTLNVGGGIGVDYAQPSQAFDWRRFCDGLGT 257

Query: 221 FSEK--YSVQIYLEPGEAIVTNTTTLNTTVLDI 251
              +     +I  E G  I  +     T V+DI
Sbjct: 258 LLAEAGAGCRIVFECGRFIAADCGYYVTEVVDI 290


>gi|148252725|ref|YP_001237310.1| putative diaminopimelate decarboxylase [Bradyrhizobium sp. BTAi1]
 gi|146404898|gb|ABQ33404.1| putative diaminopimelate decarboxylase [Bradyrhizobium sp. BTAi1]
          Length = 173

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 51/161 (31%), Gaps = 8/161 (4%)

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHV 269
              +   +K  S      +  EPG  IV N   L   V+ +     KN VI+D+++   +
Sbjct: 6   NPAYAAMVKRVSHNLGCTLMFEPGRMIVGNAGILVANVIYVKHGEAKNFVIIDAAMNDLI 65

Query: 270 PDYLLYQESATIYPNTGP------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323
               LY+    I P   P      +TA V G  C +GD             GD ++    
Sbjct: 66  RPT-LYEAHHDILPVVQPAPGAPSFTADVVGPVCESGDYLALDRTLPEPAPGDLLAIMTS 124

Query: 324 AGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
             Y   +   +N   +    +   D                
Sbjct: 125 GAYGAVQACTYNTRALVPEVLVKGDQAAVIRPRIEVEQLIA 165


>gi|217419424|ref|ZP_03450930.1| putative pyridoxal-dependent decarboxylase [Burkholderia
           pseudomallei 576]
 gi|217396728|gb|EEC36744.1| putative pyridoxal-dependent decarboxylase [Burkholderia
           pseudomallei 576]
          Length = 390

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 58/378 (15%), Positives = 113/378 (29%), Gaps = 37/378 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60
           + TP Y+ D Q +L +           G +L+++LK  +   +     + + DG   +S 
Sbjct: 17  LDTPCYVFDPQCVLASYAALRAAL---GTRLVVSLKANSHADLFLRCAHAFEDGIELASQ 73

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+     +     +  N A  D  + A +++    I +    + +F   A     +  +
Sbjct: 74  GELDTVVGRGKHVKYLNNPAMGDALMRAGIASRCHFILDGPDMVRRFIALASGKETEDVM 133

Query: 121 RINPSVS----YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF- 175
               + +    ++   L D             + +    + V GL       N       
Sbjct: 134 LRINAGALLGAHAPKSLRDHFGMTPAEALGMANLLTQAGRRVAGLHAFVGSGNFRAGPTK 193

Query: 176 --SAMLKNIEKEFGHFITQIE--------WISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
              A   ++         QIE         ++LGGG      D    +  +       K 
Sbjct: 194 GGDADSADLAWALAQLAEQIEALVRTPVTHLNLGGGFSEKGHDDATFERYRARIAPLAKR 253

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------------D 271
              ++ E G AI  N     T V  +      ++ V     +H                 
Sbjct: 254 YTLVH-EAGRAIFANAGVFVTRVRAVKVWDDRVIAVCDGGMSHNFLLAKTEAILKTWAAP 312

Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYNINR 330
            L+   +A  +           G +C   D+ G      +  + GD + F     Y+ + 
Sbjct: 313 TLVPAGAADAHRAPNARPITFVGNTCNRADVIGRLERHPRLPQPGDFVVFSQCGAYHHSY 372

Query: 331 K-NWFNGINMPTIAVKNV 347
             + F     P       
Sbjct: 373 TVSGFLSH-KPAQVYIRQ 389


>gi|53724490|ref|YP_104642.1| pyridoxal-dependent decarboxylase family protein [Burkholderia
           mallei ATCC 23344]
 gi|67643476|ref|ZP_00442222.1| pyridoxal-dependent decarboxylase family protein [Burkholderia
           mallei GB8 horse 4]
 gi|121599096|ref|YP_991480.1| pyridoxal-dependent decarboxylase family protein [Burkholderia
           mallei SAVP1]
 gi|124385611|ref|YP_001027442.1| pyridoxal-dependent decarboxylase family protein [Burkholderia
           mallei NCTC 10229]
 gi|126449890|ref|YP_001082408.1| pyridoxal-dependent decarboxylase family protein [Burkholderia
           mallei NCTC 10247]
 gi|167001221|ref|ZP_02267020.1| putative pyridoxal-dependent decarboxylase [Burkholderia mallei
           PRL-20]
 gi|254175240|ref|ZP_04881901.1| pyridoxal-dependent decarboxylase family protein [Burkholderia
           mallei ATCC 10399]
 gi|254201732|ref|ZP_04908096.1| putative pyridoxal-dependent decarboxylase [Burkholderia mallei
           FMH]
 gi|254207065|ref|ZP_04913416.1| putative pyridoxal-dependent decarboxylase [Burkholderia mallei
           JHU]
 gi|254357546|ref|ZP_04973820.1| putative pyridoxal-dependent decarboxylase [Burkholderia mallei
           2002721280]
 gi|52427913|gb|AAU48506.1| pyridoxal-dependent decarboxylase family protein [Burkholderia
           mallei ATCC 23344]
 gi|121227906|gb|ABM50424.1| pyridoxal-dependent decarboxylase family protein [Burkholderia
           mallei SAVP1]
 gi|124293631|gb|ABN02900.1| pyridoxal-dependent decarboxylase family protein [Burkholderia
           mallei NCTC 10229]
 gi|126242760|gb|ABO05853.1| pyridoxal-dependent decarboxylase family protein [Burkholderia
           mallei NCTC 10247]
 gi|147747626|gb|EDK54702.1| putative pyridoxal-dependent decarboxylase [Burkholderia mallei
           FMH]
 gi|147752607|gb|EDK59673.1| putative pyridoxal-dependent decarboxylase [Burkholderia mallei
           JHU]
 gi|148026610|gb|EDK84695.1| putative pyridoxal-dependent decarboxylase [Burkholderia mallei
           2002721280]
 gi|160696285|gb|EDP86255.1| pyridoxal-dependent decarboxylase family protein [Burkholderia
           mallei ATCC 10399]
 gi|238524832|gb|EEP88263.1| pyridoxal-dependent decarboxylase family protein [Burkholderia
           mallei GB8 horse 4]
 gi|243062942|gb|EES45128.1| putative pyridoxal-dependent decarboxylase [Burkholderia mallei
           PRL-20]
          Length = 398

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 58/378 (15%), Positives = 112/378 (29%), Gaps = 37/378 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60
           + TP Y+ D Q +L             G +L+++LK  +   +     + + DG   +S 
Sbjct: 25  LDTPCYVFDPQCVLAGYAALRAAL---GTRLVVSLKANSHADLFLRCAHAFEDGIELASQ 81

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+     +     +  N A  D  + A +++    I +    + +F   A     +  +
Sbjct: 82  GELDTVVGRGKHVKYLNNPAMGDALMRAGIASRCHFILDGPDMVRRFIALASGKETEDVM 141

Query: 121 RINPSVS----YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF- 175
               + +    ++   L D             + +    + V GL       N       
Sbjct: 142 LRINAGALLGAHAPKSLRDHFGMTPAEALGMANLLTQAGRRVAGLHAFVGSGNFRAGPTK 201

Query: 176 --SAMLKNIEKEFGHFITQIE--------WISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
              A   ++         QIE         ++LGGG      D    +  +       K 
Sbjct: 202 GGDADSADLAWALAQLAEQIEALVRAPVTHLNLGGGFSEKGHDDATFERYRARIAPLAKR 261

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------------D 271
              ++ E G AI  N     T V  +      ++ V     +H                 
Sbjct: 262 YTLVH-EAGRAIFANAGVFVTRVRAVKVWDDRVIAVCDGGMSHNFLLAKTEAVLKTWAAP 320

Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYNINR 330
            L+   +A  +           G +C   D+ G      +  + GD + F     Y+ + 
Sbjct: 321 TLVPAGTADAHRAPNARPITFVGNTCNRADVIGRLERHPRLPQPGDFVVFSQCGAYHHSY 380

Query: 331 K-NWFNGINMPTIAVKNV 347
             + F     P       
Sbjct: 381 TVSGFLSH-KPAQVYIRQ 397


>gi|167568677|ref|ZP_02361551.1| pyridoxal-dependent decarboxylase family protein [Burkholderia
           oklahomensis C6786]
          Length = 398

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 58/378 (15%), Positives = 111/378 (29%), Gaps = 37/378 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60
           + TP Y+ D Q +L             G +L+++LK  +   +     + + DG   +S 
Sbjct: 25  LDTPCYVFDPQCVLAGYAALRAAL---GTRLVVSLKANSHADLFLRCAHAFEDGIELASQ 81

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+     +     +  N A  D  + A +++    I +    + +F   A     +  +
Sbjct: 82  GELDTVVGRGKHVKYLNNPAMGDALMRAGIASRCHFILDGPDMVRRFIALASGKETEDVM 141

Query: 121 RINPSVS----YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF- 175
               + +    ++   L D             + +    + V GL       N       
Sbjct: 142 LRINAGALLGAHAPKSLRDHFGMTPAEALGMANLLTQAGRRVAGLHAFVGSGNFRAGPTK 201

Query: 176 --SAMLKNIEKEFGHFITQIE--------WISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
              A   ++         QIE         ++LGGG      D    +  +       K 
Sbjct: 202 GGDADSADLAWALAQLAEQIESLVRAPVTHLNLGGGFSEKGHDDATFERYRARIAPLAKR 261

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------------D 271
              ++ E G AI  N     T V  +      ++ V     +H                 
Sbjct: 262 YTLVH-EAGRAIFANAGVFVTRVRAVKVWDDRVIAVCDGGMSHNFLLAKTEAVLKTWEAP 320

Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYNINR 330
            L+    A  +           G +C   D+ G      +  + GD + F     Y+ + 
Sbjct: 321 TLVPAGPADAHRAPNTLPVTFVGNTCNRADVIGRLERHPRLPQPGDFVVFSQCGAYHHSY 380

Query: 331 K-NWFNGINMPTIAVKNV 347
             + F     P       
Sbjct: 381 TVSGFLSH-KPAQVYIRQ 397


>gi|189373|gb|AAA59968.1| ornithine decarboxylase (EC 4.1.1.17) [Homo sapiens]
          Length = 350

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 48/284 (16%), Positives = 89/284 (31%), Gaps = 38/284 (13%)

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF 172
               K+ LRI    S +   L+       R      ++ +    +V G+ FH        
Sbjct: 35  HPKAKLVLRIATDDSKAVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDP 94

Query: 173 LCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSE 223
             F   + +    F         +  + +GGG   ++      +           K F  
Sbjct: 95  ETFVQAISDARCVFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPS 154

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVL-------------------------DISENIKNL 258
              V+I  EPG   V +  TL   ++                          +++ +   
Sbjct: 155 DSGVRIIAEPGRYYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGS 214

Query: 259 VIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRI 318
                   AHV   L  +           Y++ + G +C   D   E      + +GD +
Sbjct: 215 FNCILYDHAHVKPLLQKRPKPD----EKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWM 270

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
            FE++  Y +   + FNG   PTI         + +++F   D+
Sbjct: 271 LFENMGAYTVAAASTFNGFQRPTIYYVMSGPAWQLMQQFQNPDF 314


>gi|291457070|ref|ZP_06596460.1| diaminopimelate decarboxylase [Bifidobacterium breve DSM 20213]
 gi|291380905|gb|EFE88423.1| diaminopimelate decarboxylase [Bifidobacterium breve DSM 20213]
          Length = 542

 Score =  104 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 67/249 (26%), Gaps = 34/249 (13%)

Query: 150 KIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFT 205
               ++  + G   H          F      M+   +  +      +  I LGGG    
Sbjct: 290 LANQDVLELVGAHSHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVA 349

Query: 206 DKDYPVKDFCQR-----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254
             D                            +  I  EPG  IV         V  I   
Sbjct: 350 YTDGEDSMDIDVELTRLAGSVSDTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGTIKHV 409

Query: 255 I--------------KNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT----AMVCGRS 296
                          +  V VD  +  ++   L   +      N    T    A VCG  
Sbjct: 410 HLSDAKDSAGNPIGERVYVSVDGGMSDNIRPALYGADYTARLANRTGSTETMLARVCGMH 469

Query: 297 CLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           C +GDI          +K GD ++      Y     + +N   +P +   +  G    +R
Sbjct: 470 CESGDIVVHEVRLPADLKRGDILAVPVTGAYGRTMASNYNQALIPAVVAVSEQGAHVMLR 529

Query: 356 EFSYNDYYN 364
             + +D  +
Sbjct: 530 RQTIDDLLD 538



 Score = 82.9 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 21/157 (13%), Positives = 47/157 (29%), Gaps = 9/157 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
            +P YLID  ++                 +   +  A K F +  +   + +      + 
Sbjct: 36  GSPLYLIDTDEVSARAKHFVRAAAEAFNTSTTHVSFAGKAFLSKEIVRLVAEAGMFVDTC 95

Query: 59  SLYEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           ++ E+ +       G     +   K  +    A+      I+ +  ++  +    A+KL 
Sbjct: 96  TMGEMRIALAAGVPGRRLVLHGNNKSDDEIALAIEQGFAKIVVDEPNEPERIAAIARKLG 155

Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKCKDK 150
           K+    LR+   V               + G      
Sbjct: 156 KRARVMLRVTVGVHAGGHEYISTAHEDQKFGVPLLAA 192


>gi|53718125|ref|YP_107111.1| putative pyridoxal-dependent decarboxylase [Burkholderia
           pseudomallei K96243]
 gi|167717961|ref|ZP_02401197.1| putative pyridoxal-dependent decarboxylase [Burkholderia
           pseudomallei DM98]
 gi|167814089|ref|ZP_02445769.1| putative pyridoxal-dependent decarboxylase [Burkholderia
           pseudomallei 91]
 gi|167892695|ref|ZP_02480097.1| putative pyridoxal-dependent decarboxylase [Burkholderia
           pseudomallei 7894]
 gi|167917439|ref|ZP_02504530.1| putative pyridoxal-dependent decarboxylase [Burkholderia
           pseudomallei BCC215]
 gi|52208539|emb|CAH34475.1| putative pyridoxal-dependent decarboxylase [Burkholderia
           pseudomallei K96243]
          Length = 398

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 58/378 (15%), Positives = 112/378 (29%), Gaps = 37/378 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60
           + TP Y+ D Q +L             G +L+++LK  +   +     + + DG   +S 
Sbjct: 25  LDTPCYVFDPQCVLAGYAALRAAL---GTRLVVSLKANSHADLFLRCAHAFEDGIELASQ 81

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+     +     +  N A  D  + A +++    I +    + +F   A     +  +
Sbjct: 82  GELDTVVGRGKHVKYLNNPAMGDALMRAGIASRCHFILDGPDMVRRFIALASGKETEDVM 141

Query: 121 RINPSVS----YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF- 175
               + +    ++   L D             + +    + V GL       N       
Sbjct: 142 LRINAGALLGAHAPKSLRDHFGMTPAEALGMANLLTQAGRRVAGLHAFVGSGNFRAGPTK 201

Query: 176 --SAMLKNIEKEFGHFITQIE--------WISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
              A   ++         QIE         ++LGGG      D    +  +       K 
Sbjct: 202 GGDADSADLAWALAQLAEQIEALVRTPVTHLNLGGGFSEKGHDDATFERYRARIAPLAKR 261

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------------D 271
              ++ E G AI  N     T V  +      ++ V     +H                 
Sbjct: 262 YTLVH-EAGRAIFANAGVFVTRVRAVKVWDDRVIAVCDGGMSHNFLLAKTEAVLKTWAAP 320

Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYNINR 330
            L+   +A  +           G +C   D+ G      +  + GD + F     Y+ + 
Sbjct: 321 TLVPAGAADAHRAPNARPITFVGNTCNRADVIGRLERHPRLPQPGDFVVFSQCGAYHHSY 380

Query: 331 K-NWFNGINMPTIAVKNV 347
             + F     P       
Sbjct: 381 TVSGFLSH-KPAQVYIRQ 397


>gi|254187839|ref|ZP_04894351.1| pyridoxal-dependent decarboxylase family protein [Burkholderia
           pseudomallei Pasteur 52237]
 gi|157935519|gb|EDO91189.1| pyridoxal-dependent decarboxylase family protein [Burkholderia
           pseudomallei Pasteur 52237]
          Length = 398

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 58/378 (15%), Positives = 112/378 (29%), Gaps = 37/378 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60
           + TP Y+ D Q +L             G +L+++LK  +   +     + + DG   +S 
Sbjct: 25  LDTPCYVFDPQCVLAGYAALRAAL---GTRLVVSLKANSHADLFLRCAHAFEDGIELASQ 81

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+     +     +  N A  D  + A +++    I +    + +F   A     +  +
Sbjct: 82  GELDTVVGRGKHVKYLNNPAMGDALMRAGIASRCHFILDGPDMVRRFIALASGKETEDVM 141

Query: 121 RINPSVS----YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF- 175
               + +    ++   L D             + +    + V GL       N       
Sbjct: 142 LRINAGALLGAHAPKSLRDHFGMTPAEALGMANLLTQAGRRVAGLHAFVGSGNFRAGPTK 201

Query: 176 --SAMLKNIEKEFGHFITQIE--------WISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
              A   ++         QIE         ++LGGG      D    +  +       K 
Sbjct: 202 GGDADSADLAWALAQLAEQIEALVRAPVTHLNLGGGFSEKGHDDATFERYRARIAPLAKR 261

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------------D 271
              ++ E G AI  N     T V  +      ++ V     +H                 
Sbjct: 262 YTLVH-EAGRAIFANAGVFVTRVRAVKVWDDRVIAVCDGGMSHNFLLAKTEAVLKTWAAP 320

Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYNINR 330
            L+   +A  +           G +C   D+ G      +  + GD + F     Y+ + 
Sbjct: 321 TLVPAGAADAHRAPNARPITFVGNTCNRADVIGRLERHPRLPQPGDFVVFSQCGAYHHSY 380

Query: 331 K-NWFNGINMPTIAVKNV 347
             + F     P       
Sbjct: 381 TVSGFLSH-KPAQVYIRQ 397


>gi|39894|emb|CAA34876.1| unnamed protein product [Bacillus subtilis]
          Length = 327

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 46/281 (16%), Positives = 86/281 (30%), Gaps = 37/281 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP Y+ D   +     +      +AG   ++  A K F++  M     +        S 
Sbjct: 32  GTPLYVYDVALIRERAKSFKQAFISAGLKAQVAYASKAFSSVAMIQLAEEEGLSLDVVS- 90

Query: 61  YE--VMLGHEKFGGETHAYNV------AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112
            E  + L  + F      +                A  +    I   +    +    K  
Sbjct: 91  GESYIRLLQQAFRQNASTFMETIRAGKNCGWRLSTASAALWWIISMKSSLLEDL--CKET 148

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKC---------KDKIESEIKNVNGLMF 163
                + LRI P V           +  S+ G            +  ++SE   + G+  
Sbjct: 149 GHSIDVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQTERAIEQVLQSEHIQLLGVHC 208

Query: 164 HNNCENKSFLCFSAMLKNIEKEFGHFITQI----EWISLGGGIHFTDKDYPVKDFC---- 215
           H   +      F    + I K+   +        + ++LGGG      +           
Sbjct: 209 HIGSQIFDTAGFVLAAEKIFKKLDEWRDSYSFVSKVLNLGGGFGIRYTEDDEPLHATEYV 268

Query: 216 ----QRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVL 249
               + +KE + +Y      I++EPG ++V +  T   TV 
Sbjct: 269 EKIIEAVKENASRYGFDIPEIWIEPGRSLVGDAGTTLYTVG 309


>gi|237810729|ref|YP_002895180.1| pyridoxal-dependent decarboxylase family protein [Burkholderia
           pseudomallei MSHR346]
 gi|237505916|gb|ACQ98234.1| pyridoxal-dependent decarboxylase family protein [Burkholderia
           pseudomallei MSHR346]
          Length = 398

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 58/378 (15%), Positives = 112/378 (29%), Gaps = 37/378 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60
           + TP Y+ D Q +L             G +L+++LK  +   +     + + DG   +S 
Sbjct: 25  LDTPCYVFDPQCVLAGYAALRAAL---GTRLVVSLKANSHADLFLRCAHAFEDGIELASQ 81

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+     +     +  N A  D  + A +++    I +    + +F   A     +  +
Sbjct: 82  GELDTVVGRGKHVKYLNNPAMGDALMRAGIASRCHFILDGPDMVRRFIALASGKETEDVM 141

Query: 121 RINPSVS----YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF- 175
               + +    ++   L D             + +    + V GL       N       
Sbjct: 142 LRINAGALLGAHAPKSLRDHFGMTPAEALGMANLLTQAGRRVAGLHAFVGSGNFRAGPTK 201

Query: 176 --SAMLKNIEKEFGHFITQIE--------WISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
              A   ++         QIE         ++LGGG      D    +  +       K 
Sbjct: 202 GGDADSADLAWALAQLAEQIEALVRAPVTHLNLGGGFSEKGHDDATFERYRARIAPLAKR 261

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------------D 271
              ++ E G AI  N     T V  +      ++ V     +H                 
Sbjct: 262 YTLVH-EAGRAIFANAGVFVTRVRAVKVWDDRVIAVCDGGMSHNFLLAKTEAVLKTWEAP 320

Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYNINR 330
            L+   +A  +           G +C   D+ G      +  + GD + F     Y+ + 
Sbjct: 321 TLVPAGAADAHRAPNARPITFVGNTCNRADVIGRLERHPRLPQPGDFVVFSQCGAYHHSY 380

Query: 331 K-NWFNGINMPTIAVKNV 347
             + F     P       
Sbjct: 381 TVSGFLSH-KPAQVYIRQ 397


>gi|134279558|ref|ZP_01766270.1| putative pyridoxal-dependent decarboxylase [Burkholderia
           pseudomallei 305]
 gi|167736984|ref|ZP_02409758.1| pyridoxal-dependent decarboxylase family protein [Burkholderia
           pseudomallei 14]
 gi|167822612|ref|ZP_02454083.1| pyridoxal-dependent decarboxylase family protein [Burkholderia
           pseudomallei 9]
 gi|226199536|ref|ZP_03795093.1| putative pyridoxal-dependent decarboxylase [Burkholderia
           pseudomallei Pakistan 9]
 gi|254181907|ref|ZP_04888504.1| pyridoxal-dependent decarboxylase family protein [Burkholderia
           pseudomallei 1655]
 gi|134248758|gb|EBA48840.1| putative pyridoxal-dependent decarboxylase [Burkholderia
           pseudomallei 305]
 gi|184212445|gb|EDU09488.1| pyridoxal-dependent decarboxylase family protein [Burkholderia
           pseudomallei 1655]
 gi|225928417|gb|EEH24447.1| putative pyridoxal-dependent decarboxylase [Burkholderia
           pseudomallei Pakistan 9]
          Length = 398

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 58/378 (15%), Positives = 112/378 (29%), Gaps = 37/378 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60
           + TP Y+ D Q +L             G +L+++LK  +   +     + + DG   +S 
Sbjct: 25  LDTPCYVFDPQCVLAGYAALRAAL---GTRLVVSLKANSHADLFLRCAHAFEDGIELASQ 81

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+     +     +  N A  D  + A +++    I +    + +F   A     +  +
Sbjct: 82  GELDTVVGRGKHVKYLNNPAMGDALMRAGIASRCHFILDGPDMVRRFIALASGKETEDVM 141

Query: 121 RINPSVS----YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF- 175
               + +    ++   L D             + +    + V GL       N       
Sbjct: 142 LRINAGALLGAHAPKSLRDHFGMTPAEALGMANLLTQAGRRVAGLHAFVGSGNFRAGPTK 201

Query: 176 --SAMLKNIEKEFGHFITQIE--------WISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
              A   ++         QIE         ++LGGG      D    +  +       K 
Sbjct: 202 GGDADSADLAWALAQLAEQIEALVRAPVTHLNLGGGFSEKGHDDATFERYRARIAPLAKR 261

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------------D 271
              ++ E G AI  N     T V  +      ++ V     +H                 
Sbjct: 262 YTLVH-EAGRAIFANAGVFVTRVRAVKVWDDRVIAVCDGGMSHNFLLAKTEAVLKTWAAP 320

Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYNINR 330
            L+   +A  +           G +C   D+ G      +  + GD + F     Y+ + 
Sbjct: 321 TLVPAGAADAHRAPNARPITFVGNTCNRADVIGRLERHPRLPQPGDFVVFSQCGAYHHSY 380

Query: 331 K-NWFNGINMPTIAVKNV 347
             + F     P       
Sbjct: 381 TVSGFLSH-KPAQVYIRQ 397


>gi|114576091|ref|XP_001156876.1| PREDICTED: ornithine decarboxylase 1 isoform 2 [Pan troglodytes]
          Length = 332

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 48/284 (16%), Positives = 89/284 (31%), Gaps = 38/284 (13%)

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF 172
               K+ LRI    S +   L+       R      ++ +    +V G+ FH        
Sbjct: 17  HPKAKLVLRIATDDSKAVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDP 76

Query: 173 LCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSE 223
             F   + +    F         +  + +GGG   ++      +           K F  
Sbjct: 77  ETFVQAISDARCVFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPS 136

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVL-------------------------DISENIKNL 258
              V+I  EPG   V +  TL   ++                          +++ +   
Sbjct: 137 DSGVRIIAEPGRYYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGS 196

Query: 259 VIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRI 318
                   AHV   L  +           Y++ + G +C   D   E      + +GD +
Sbjct: 197 FNCILYDHAHVKPLLQKRPKPD----EKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWM 252

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
            FE++  Y +   + FNG   PTI         + +++F   D+
Sbjct: 253 LFENMGAYTVAAASTFNGFQRPTIYYVMSGPAWQLMQQFQNPDF 296


>gi|6562332|emb|CAB62550.1| diaminopimelate decarboxylase [Arabidopsis thaliana]
          Length = 145

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 50/140 (35%), Gaps = 7/140 (5%)

Query: 232 EPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT- 289
           E G +++ NT      V  +  N  KN +++D S+   +   L          +  P   
Sbjct: 1   ELGRSLIANTCCFVNHVTGVKTNGTKNFIVIDGSMAELIRPSLYDAYQHIELVSPTPPEA 60

Query: 290 ----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
                 V G  C + D  G+         G  +   D   Y ++  + +N    P     
Sbjct: 61  EVTKFDVVGPVCESADFLGKDRELPTPPQGAGLVVHDAGAYCMSMASTYNLKMRPPEYWV 120

Query: 346 NVDGTIKAIRE-FSYNDYYN 364
             DG+I  IR   +++D+  
Sbjct: 121 EEDGSITKIRHAETFDDHLR 140


>gi|126642606|ref|YP_001085590.1| putative ornithine decarboxylase [Acinetobacter baumannii ATCC
           17978]
          Length = 325

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 46/320 (14%), Positives = 99/320 (30%), Gaps = 28/320 (8%)

Query: 44  MFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNT 100
           M + L +       +S+ E+             A+    K                + ++
Sbjct: 1   MIERLCRIGSSFDLASVNELKKVQAFGVDASRLAFGNTIKKRADIQYFYEQGIRLYVTDS 60

Query: 101 VSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN- 159
            + LN     A        L I+              +         +  ++++   +  
Sbjct: 61  DADLNNIAQYAPGSKVFFRLSID---GSETADWPLSGKFGCNAECVIRLAVKAKELGLIP 117

Query: 160 -GLMFHNNCENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDYPVKDF 214
            G+ FH   + +    + + L   +  F          ++ ++LGGG+            
Sbjct: 118 YGISFHVGSQQRKIDLWDSALAETKAIFDVLVNDHQIHLKMLNLGGGLPAQYVQQTEAFA 177

Query: 215 C------QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK-----NLVIVDS 263
                    L+ F      QI LEPG ++V N   L + ++ IS+  +      +     
Sbjct: 178 SYSKQINAALEMFKPYQLEQIILEPGRSLVGNAGILVSEIVLISQRPQSGTKRWVYTDVG 237

Query: 264 SVEAHVPDYLLYQESATIYPNTGP-YTAMVCGRSCLAGDIFG---EFHFEKPVKIGDRIS 319
                +       +   +   TG     ++ G +C + DI     ++     ++IGD + 
Sbjct: 238 VFNGLIETLGEAIQYPIVCKKTGQSDDIILAGPTCDSMDIMYQNKKYELPLSLEIGDHLY 297

Query: 320 FEDVAGYNINRKN-WFNGIN 338
           +     Y  +  +  FNG  
Sbjct: 298 WLSTGAYTTSYSSIEFNGFP 317


>gi|167561446|ref|ZP_02354362.1| pyridoxal-dependent decarboxylase family protein [Burkholderia
           oklahomensis EO147]
          Length = 398

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 58/378 (15%), Positives = 111/378 (29%), Gaps = 37/378 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60
           + TP Y+ D Q +L             G +L+++LK  +   +     + + DG   +S 
Sbjct: 25  LDTPCYVFDPQCVLAGYAALRAAL---GTRLVVSLKANSHADLFLRCAHAFEDGIELASQ 81

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+     +     +  N A  D  + A +++    I +    + +F   A     +  +
Sbjct: 82  GELDTVVGRGKHVKYLNNPAMGDALMRAGIASRCHFILDGPDMVRRFIALASGKETEDVM 141

Query: 121 RINPSVS----YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF- 175
               + +    ++   L D             + +    + V GL       N       
Sbjct: 142 LRINAGALLGAHAPKSLRDHFGMTPAEALGMANLLTQAGRRVAGLHAFVGSGNFRAGPTK 201

Query: 176 --SAMLKNIEKEFGHFITQIE--------WISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
              A   ++         QIE         ++LGGG      D    +  +       K 
Sbjct: 202 GGDADSADLAWALAQLAEQIESLVRAPVTHLNLGGGFSEKGHDDATFERYRARIAPLAKR 261

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------------D 271
              ++ E G AI  N     T V  +      ++ V     +H                 
Sbjct: 262 YTLVH-EAGRAIFANAGVFVTRVRAVKVWDDRVIAVCDGGMSHNFLLAKTEAVLKTWEAP 320

Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYNINR 330
            L+    A  +           G +C   D+ G      +  + GD + F     Y+ + 
Sbjct: 321 TLVPAGPADAHRAPNALPITFVGNTCNRADVIGRLERHPRLPQPGDFVVFSQCGAYHHSY 380

Query: 331 K-NWFNGINMPTIAVKNV 347
             + F     P       
Sbjct: 381 TVSGFLSH-KPAQVYIRQ 397


>gi|88601236|gb|ABD46616.1| diaminopimelate decarboxylase-like protein [Glaucocystis
           nostochinearum]
          Length = 162

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 51/153 (33%), Gaps = 4/153 (2%)

Query: 213 DFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA-HVPD 271
                +K+      + I +EPG +IV NT  L   V  +  N     IV     A  +  
Sbjct: 5   HLIDTIKDLILANDIGIMVEPGRSIVGNTGMLVNKVTGVKTNGNKNFIVTDGSMAELIRP 64

Query: 272 YLLYQ--ESATIYPNTGPY-TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
            L         I P +G      + G  C + D  G+         G  I+  D   Y+ 
Sbjct: 65  SLYDAFMYIDFIEPVSGAEKEFDIVGPVCESADFLGKDRMLPTPPEGAGIAVFDAGAYSY 124

Query: 329 NRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361
              + +N    P   + + D      +  S ++
Sbjct: 125 CMSSNYNMKMRPPEYLVDGDKVTLIRKGESLDE 157


>gi|114764907|ref|ZP_01444080.1| Putative Ornithine decarboxylase [Pelagibaca bermudensis HTCC2601]
 gi|114542619|gb|EAU45643.1| Putative Ornithine decarboxylase [Roseovarius sp. HTCC2601]
          Length = 375

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 43/347 (12%), Positives = 93/347 (26%), Gaps = 28/347 (8%)

Query: 23  YIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEVMLGHEKFGGETHAYNVAY 81
                    +  A+K      M + L +        +S  E+ L   +       Y+   
Sbjct: 38  RFLDGFPGVVSYAVKANPLPEMIEGLWRAGLRVFDVASPAEMALVRAQCPEAVLHYHNPV 97

Query: 82  KDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRP 139
           +     +      C +   + +S+L K           + L++  + +   F       P
Sbjct: 98  RSQAEVSAGLAHRCVSWSVDRMSELEKLAALPAGTEIAVRLKLPVAGAAYDFGAKFGAEP 157

Query: 140 FSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLG 199
              +    +        ++    FH   + +    ++  +             +  +++G
Sbjct: 158 AGAVTLLRRVAEMGLTPSLT---FHPGTQCRGAEPWARYIHAAAGVARDAGVTLHRLNVG 214

Query: 200 GGIHFTDKD-----YPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254
           GG      +       +     R    +      +  EPG  +      L   V  +   
Sbjct: 215 GGFPSDRGEGEPDLETIFATIGRATREAFPRPPDLVCEPGRGLCAEAFLLALKVKAVEAE 274

Query: 255 IKNLVIVDSSVEAHVPDYLLYQE-----SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFE 309
              +        A   D  +         A           +V G +C + D   E    
Sbjct: 275 ALFVNDGIYGSMAEWRDLGMAGRVRVVDPAGRRRGGRAQPRIVFGPTCDSLDRLPEPMAL 334

Query: 310 KP-VKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
              ++ GD +  E +  Y+      FNG            G  + +R
Sbjct: 335 PAAIEEGDFVICEGMGAYSRALVTGFNGY-----------GARRVVR 370


>gi|301114639|ref|XP_002999089.1| pyridoxal-dependent decarboxylase, putative [Phytophthora infestans
            T30-4]
 gi|262111183|gb|EEY69235.1| pyridoxal-dependent decarboxylase, putative [Phytophthora infestans
            T30-4]
          Length = 1199

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 49/388 (12%), Positives = 110/388 (28%), Gaps = 54/388 (13%)

Query: 8    LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67
            + D   +       L        +   A+K            +   G   +S+ EV    
Sbjct: 784  VYDLDAIDMAFQALLTSFP-VHFEHRFAMKSCPLSFFIKRAIENDVGLECASIVEVKHAL 842

Query: 68   E-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--------- 116
                      + +      ++   +     +  +   +L+  ++ A+ + +         
Sbjct: 843  RLGCPPHRIVFDSPCKTRRDLQFAIIAGVEVNADNFDELDIIREHAEAIFQSSFPECTPR 902

Query: 117  ------KIGLRINPSVSYSKFILADPNRPFSRLGEKC-----KDKIESEIKN--VNGLMF 163
                  +IGLRINP +          +   S+ G           I     N  + GL  
Sbjct: 903  YAGNLPRIGLRINPLLGAGANSCLSVSTVQSKFGVPLTAENRARIIAFFCANPYMTGLHA 962

Query: 164  HNNCENKSFLCFSAMLK-----NIEKEFGHFITQIEWISLGGGIH-FTDKDYPVKDFCQR 217
            H   +  S    S           E +     ++I+ +++GGG+    D +     F + 
Sbjct: 963  HVGSQGCSLEMLSQGAVVLSELANEIDAAAGTSRIKVLNIGGGLSTNFDDEEVSPTFAEY 1022

Query: 218  LK-------EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD------SS 264
            ++       +  ++    I  E G ++ + T  + + V  +  + +             +
Sbjct: 1023 VEVLRREAPQLFKRTGRTILTEFGSSVSSKTGWVVSEVEYVKAHPQVDGDDLTQTAIIHA 1082

Query: 265  VEAHVPDYLLYQ---------ESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKI 314
                                  +     +  P +   V G  C  GD+ G       +  
Sbjct: 1083 GSDLFLRACYRPELFARRMSVYNPAGLVSMAPVSVQNVAGPLCFGGDMVGRRVELPTISQ 1142

Query: 315  GDRISFEDVAGYNINRKNWFNGINMPTI 342
            GD +   D     ++  +       P +
Sbjct: 1143 GDFVVVHDTGANTMSMFSRHCSRPAPAV 1170


>gi|54026837|ref|YP_121079.1| hypothetical protein nfa48630 [Nocardia farcinica IFM 10152]
 gi|54018345|dbj|BAD59715.1| hypothetical protein [Nocardia farcinica IFM 10152]
          Length = 489

 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 63/418 (15%), Positives = 120/418 (28%), Gaps = 84/418 (20%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           + TP++L+   ++  N+         AGV   +    K   A  +     +   G   +S
Sbjct: 85  VGTPFHLLAPARVRANIAAFQVAFTTAGVDGYVYYGKKANKAACVARACAEQGAGVDVAS 144

Query: 60  LYEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
           + E+     +   G E      A  D  +     +   +  + V +L +    A     +
Sbjct: 145 VGELTAALAQGVRGPELMVTGPAKSDELLWLATRHGAVVAVDAVDELER--MVAAGFDTR 202

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE------IKNVNGLMFHNN-CENK 170
           + LR+ P  S             SR G   ++   +          + G  FH    E  
Sbjct: 203 VLLRVLPPAS------------DSRFGMTDEELDRALTLLAGTRIRLAGFSFHLGGYEAS 250

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD------------------------ 206
           +    +A+L              + IS+GGG                             
Sbjct: 251 ARAELAAVLVERCVRARAEGHAADTISIGGGFGVDYVPAQAWAAFTAAAGPAWFHAGKSF 310

Query: 207 -KDYPVKDF-------CQRLKEF-----SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE 253
              YP            + L+            +++ +EPG A++         V     
Sbjct: 311 DSYYPYHFPVPGAAMLAEILRHGGLAELLRGNGIRLAIEPGRALLDRAGCTVFGVRGAKT 370

Query: 254 NIKNLVIVDSSVEA--------------HVPDYLLYQESATIYPNTGPYTAMVCGRSCLA 299
              +                         +PD LL+           P    V   SCL 
Sbjct: 371 RHAHGRPYRLLTVDGTSLSLSEQWFASEFLPDPLLWPTRPG-----APTPTCVGATSCLE 425

Query: 300 GDIFGEFH--FEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPTIAVKNVDGTIKAI 354
            D+         +  + GD + + + AGY ++   + F+ + +P   V +     +  
Sbjct: 426 SDMLSWRRIPLPRAAEPGDLLVYPNTAGYQMDSNESAFHELPIPPKVVLHETDGGRLR 483


>gi|207109674|ref|ZP_03243836.1| diaminopimelate decarboxylase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 113

 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 31/104 (29%), Gaps = 4/104 (3%)

Query: 265 VEAHVPDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
           +   +   L + + A                V G  C + D F +      ++ GD+I+ 
Sbjct: 1   MNDFLRPSLYHAKHAIRVITPSKGRKISPCDVVGPVCESSDTFLKDVHLPELEPGDKIAI 60

Query: 321 EDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           E V  Y  +  + +N                   +  +  D + 
Sbjct: 61  EKVGAYGSSMASQYNSRPKLLELALEDHKIRVIRKREALEDLWR 104


>gi|83778339|gb|ABC47117.1| ornithine decarboxylase [Fusarium solani]
          Length = 312

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 45/310 (14%), Positives = 77/310 (24%), Gaps = 30/310 (9%)

Query: 19  DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAY 77
               + +    V+   A+KC     +   L +   G   +S  E+          +   Y
Sbjct: 2   QHLRWKKNLPRVRPFYAVKCNPDTQIIKLLAELGTGFDCASKAEIEQVLSLGLSPDRIIY 61

Query: 78  NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPN 137
               K       +           +    +K        ++ LRI    S S    +   
Sbjct: 62  AQPCKTNSYVRYVKTAGVKQMTFDNSDELYKIAKLYPGAELFLRIMTDDSESMCRFSMKF 121

Query: 138 RPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIE 194
                  E      +    NV G+ FH        L F   +++    F         + 
Sbjct: 122 GAAMETAEGLLALAKHLGLNVIGVSFHVGSGASDPLAFYKAVRDAHTVFQQARELGFDMR 181

Query: 195 WISLGGGI-HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD--- 250
            + +GGG    T +           + F     V I  EPG   V    T+   ++    
Sbjct: 182 TLDVGGGFSGDTFETMAEVLREALDEFFPPGCGVDIMAEPGRYYVATAFTIACNIIARRT 241

Query: 251 ------------ISENIKNLVIVDSSVEAHVPDYL----------LYQESATIYPNTGPY 288
                       +  N        + V  H                   SA   P     
Sbjct: 242 VEDPTLDGKGYMVYVNDGVYGNFSNIVFDHQTPVAKILRASGKTLYETPSAHPVPTGEGV 301

Query: 289 TAMVCGRSCL 298
              + G +C 
Sbjct: 302 EYSIWGPTCD 311


>gi|229817125|ref|ZP_04447407.1| hypothetical protein BIFANG_02383 [Bifidobacterium angulatum DSM
           20098]
 gi|229784914|gb|EEP21028.1| hypothetical protein BIFANG_02383 [Bifidobacterium angulatum DSM
           20098]
          Length = 529

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 36/248 (14%), Positives = 65/248 (26%), Gaps = 35/248 (14%)

Query: 151 IESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTD 206
              ++  + G+  H          F      M+   +  +      +  + LGGG     
Sbjct: 276 RHQDVLELVGVHSHIGSNIHDADAFIQAAKRMMLLRKTFYATDAYTLPEVDLGGGYSVAY 335

Query: 207 KDYPVKDFCQR-----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI 255
            D                    +       +  I  EPG  IV         V  +    
Sbjct: 336 TDGEDSMDIDAELGRLSQAVSSINRALGMPAPVISFEPGRWIVAPAGVTLYRVGTVKPVQ 395

Query: 256 KNLVIVDSSVE---------------AHVPDYLLYQESATIYPNTG----PYTAMVCGRS 296
            +    D +                  ++   L   + A    N         + V G  
Sbjct: 396 LSGDATDKAGNPVTERVYVSVDGGMSDNIRPALYGADYAVKLANRKGSDETKLSRVVGMH 455

Query: 297 CLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           C +GDI          +K GD ++      Y     + +N   +P +   +  G    IR
Sbjct: 456 CESGDIIVHECQLPADIKRGDVLAVPVTGAYGRTMASNYNQALIPAVVGVSEAGAHVMIR 515

Query: 356 EFSYNDYY 363
             + +D  
Sbjct: 516 RQTIDDLL 523



 Score = 82.9 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 47/154 (30%), Gaps = 9/154 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
            +P YLID  ++    +           N    +  A K F +  +   +        + 
Sbjct: 34  GSPLYLIDTDEVRQRAERFVRAAASAFDNTVTHVSFAGKAFLSKEICRIVTGAGMLIDTC 93

Query: 59  SLYEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           S+ E+ +       G     +   K  E    A+      I+ +  ++  +    A+K+ 
Sbjct: 94  SMGEMRIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKIVIDEPNEPARIAQIARKMG 153

Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKC 147
           K+    LR+   +               + G   
Sbjct: 154 KRARVMLRVTSGIHAGGHEFISTAHEDQKFGVSL 187


>gi|67968709|dbj|BAE00713.1| unnamed protein product [Macaca fascicularis]
          Length = 332

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 48/284 (16%), Positives = 89/284 (31%), Gaps = 38/284 (13%)

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF 172
               K+ LRI    S +   L+       R      ++ +    +V G+ FH        
Sbjct: 17  HPKAKLVLRIATDDSKAVCRLSVKFGATLRNSRLLLERAKELNIDVVGVSFHVGSGCTDP 76

Query: 173 LCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSE 223
             F   + +    F         +  + +GGG   ++      +           K F  
Sbjct: 77  ETFVQAISDARCVFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITNVINPALDKYFPA 136

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVL-------------------------DISENIKNL 258
              V+I  EPG   V +  TL   ++                          +++ +   
Sbjct: 137 DSGVRIIAEPGRYYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGS 196

Query: 259 VIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRI 318
                   AHV   L  +           Y++ + G +C   D   E      + +GD +
Sbjct: 197 FNCILYDHAHVKPLLQKRPKPD----EKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWM 252

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
            FE++  Y +   + FNG   PTI         + +++F   D+
Sbjct: 253 LFENMGAYTVAAASTFNGFQRPTIYYVMSGPAWQLMQQFQNPDF 296


>gi|289177558|gb|ADC84804.1| Diaminopimelate decarboxylase [Bifidobacterium animalis subsp.
           lactis BB-12]
          Length = 589

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 68/253 (26%), Gaps = 35/253 (13%)

Query: 147 CKDKIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGI 202
            ++  +     + G+  H          F      M+   +  +      +  + LGGG 
Sbjct: 332 LREIAKYGNLELVGVHSHIGSNIHDAEAFIQAAKRMMLLRKTFYATNAYTLPEVDLGGGY 391

Query: 203 HFTDKDYPVKDFCQR-----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251
                D   +    R                   +  I  EPG  IV         V  +
Sbjct: 392 SVAYTDDEDRMDVDRELGRLADAVSKTNRLLGMPAPIISFEPGRWIVAPAGVTLYRVGTV 451

Query: 252 SENIKNLVIVDSS---------------VEAHVPDYLLYQESATIYPN----TGPYTAMV 292
                     +++               +  ++   L   +   I  N         + V
Sbjct: 452 KTVQLGDGFTNNAGERIRERAYISVDGGMSDNIRPALYDAKYTAILANRESAEPAKLSRV 511

Query: 293 CGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
            G  C +GDI          V  GD ++      Y  +  + +N   +P +   +  G  
Sbjct: 512 VGIHCESGDIVVNEANLPADVHRGDILAVPVTGAYGRSMASNYNMALIPAVVGIDGHGAH 571

Query: 352 KAIREFSYNDYYN 364
             +R  + +D   
Sbjct: 572 VMMRRQTIDDLLA 584



 Score = 85.6 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 20/154 (12%), Positives = 47/154 (30%), Gaps = 9/154 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
            +P Y++D  ++            +   N    +  A K F +  M   + +      + 
Sbjct: 94  GSPLYVLDLDEVRARASHFVKAAAHAFTNNTTHVSYAAKAFLSKEMARIVTEEGMFVDTC 153

Query: 59  SLYEVMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           +L E+ +       G     +   K  E     +      I+ ++  +  +    A++L 
Sbjct: 154 TLGEMKIALAAGVPGRRLVLHGNNKSDEEIELAIAEGFSKIVIDSPDEPARIAAIAERLG 213

Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKC 147
           K+    LR+   +               + G   
Sbjct: 214 KRARVMLRVTSGIHAGGHEYVSTAHEDQKFGVAL 247


>gi|183602800|ref|ZP_02964163.1| probable diaminopimelate decarboxylase [Bifidobacterium animalis
           subsp. lactis HN019]
 gi|219683103|ref|YP_002469486.1| diaminopimelate decarboxylase [Bifidobacterium animalis subsp.
           lactis AD011]
 gi|241191433|ref|YP_002968827.1| diaminopimelate decarboxylase [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|241196839|ref|YP_002970394.1| diaminopimelate decarboxylase [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|183218038|gb|EDT88686.1| probable diaminopimelate decarboxylase [Bifidobacterium animalis
           subsp. lactis HN019]
 gi|219620753|gb|ACL28910.1| diaminopimelate decarboxylase [Bifidobacterium animalis subsp.
           lactis AD011]
 gi|240249825|gb|ACS46765.1| diaminopimelate decarboxylase [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|240251393|gb|ACS48332.1| diaminopimelate decarboxylase [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|295794426|gb|ADG33961.1| diaminopimelate decarboxylase [Bifidobacterium animalis subsp.
           lactis V9]
          Length = 529

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 68/253 (26%), Gaps = 35/253 (13%)

Query: 147 CKDKIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGI 202
            ++  +     + G+  H          F      M+   +  +      +  + LGGG 
Sbjct: 272 LREIAKYGNLELVGVHSHIGSNIHDAEAFIQAAKRMMLLRKTFYATNAYTLPEVDLGGGY 331

Query: 203 HFTDKDYPVKDFCQR-----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251
                D   +    R                   +  I  EPG  IV         V  +
Sbjct: 332 SVAYTDDEDRMDVDRELGRLADAVSKTNRLLGMPAPIISFEPGRWIVAPAGVTLYRVGTV 391

Query: 252 SENIKNLVIVDSS---------------VEAHVPDYLLYQESATIYPN----TGPYTAMV 292
                     +++               +  ++   L   +   I  N         + V
Sbjct: 392 KTVQLGDGFTNNAGERIRERAYISVDGGMSDNIRPALYDAKYTAILANRESAEPAKLSRV 451

Query: 293 CGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
            G  C +GDI          V  GD ++      Y  +  + +N   +P +   +  G  
Sbjct: 452 VGIHCESGDIVVNEANLPADVHRGDILAVPVTGAYGRSMASNYNMALIPAVVGIDGHGAH 511

Query: 352 KAIREFSYNDYYN 364
             +R  + +D   
Sbjct: 512 VMMRRQTIDDLLA 524



 Score = 85.6 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 20/154 (12%), Positives = 47/154 (30%), Gaps = 9/154 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
            +P Y++D  ++            +   N    +  A K F +  M   + +      + 
Sbjct: 34  GSPLYVLDLDEVRARASHFVKAAAHAFTNNTTHVSYAAKAFLSKEMARIVTEEGMFVDTC 93

Query: 59  SLYEVMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           +L E+ +       G     +   K  E     +      I+ ++  +  +    A++L 
Sbjct: 94  TLGEMKIALAAGVPGRRLVLHGNNKSDEEIELAIAEGFSKIVIDSPDEPARIAAIAERLG 153

Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKC 147
           K+    LR+   +               + G   
Sbjct: 154 KRARVMLRVTSGIHAGGHEYVSTAHEDQKFGVAL 187


>gi|76810875|ref|YP_332123.1| pyridoxal-dependent decarboxylase family protein [Burkholderia
           pseudomallei 1710b]
 gi|254258627|ref|ZP_04949681.1| pyridoxal-dependent decarboxylase family protein [Burkholderia
           pseudomallei 1710a]
 gi|76580328|gb|ABA49803.1| pyridoxal-dependent decarboxylase family protein [Burkholderia
           pseudomallei 1710b]
 gi|254217316|gb|EET06700.1| pyridoxal-dependent decarboxylase family protein [Burkholderia
           pseudomallei 1710a]
          Length = 398

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 58/378 (15%), Positives = 112/378 (29%), Gaps = 37/378 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60
           + TP Y+ D Q +L             G +L+++LK  +   +     + + DG   +S 
Sbjct: 25  LDTPCYVFDPQCVLAGYAALRAAL---GTRLVVSLKANSHADLFLRCAHAFEDGIELASQ 81

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+     +     +  N A  D  + A +++    I +    + +F   A     +  +
Sbjct: 82  GELDTVVGRGKHVKYLNNPAMGDALMRAGIASRCHFILDGPDMVRRFIALASGKETEDVM 141

Query: 121 RINPSVS----YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF- 175
               + +    ++   L D             + +    + V GL       N       
Sbjct: 142 LRINAGALLGAHAPKSLRDHFGMTPAEALGMANLLTQAGRRVAGLHAFVGSGNFRAGPTK 201

Query: 176 --SAMLKNIEKEFGHFITQIE--------WISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
              A   ++         QIE         ++LGGG      D    +  +       K 
Sbjct: 202 GGDADSADLAWALAQLAEQIEALVRTPVTHLNLGGGFSEKGHDDATFERYRARIAPLAKR 261

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP--------------D 271
              ++ E G AI  N     T V  +      ++ V     +H                 
Sbjct: 262 YTLVH-EAGRAIFANAGVFVTRVRAVKVWDDRVIAVCDGGMSHNFLLAKTEAVLKTWAAP 320

Query: 272 YLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDVAGYNINR 330
            L+   +A  +           G +C   D+ G      +  + GD + F     Y+ + 
Sbjct: 321 TLVPAGAADAHRAPNVRPITFVGNTCNRADVIGRLERHPRLPQPGDFVVFSQCGAYHHSY 380

Query: 331 K-NWFNGINMPTIAVKNV 347
             + F     P       
Sbjct: 381 TVSGFLSH-KPAQVYIRQ 397


>gi|212715296|ref|ZP_03323424.1| hypothetical protein BIFCAT_00188 [Bifidobacterium catenulatum DSM
           16992]
 gi|212661753|gb|EEB22328.1| hypothetical protein BIFCAT_00188 [Bifidobacterium catenulatum DSM
           16992]
          Length = 529

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 33/249 (13%), Positives = 63/249 (25%), Gaps = 35/249 (14%)

Query: 151 IESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTD 206
              ++  + G+  H          F      M+   +  +      +  + LGGG     
Sbjct: 276 RHQDVLELVGVHSHIGSNIHDADAFIQAAKRMMLLRKTFYATDAYTLPEVDLGGGYSVAY 335

Query: 207 KDYPVKDF-----------CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI 255
            D                    +       +  I  EPG   V  T      V  +    
Sbjct: 336 TDGEDSMDLDTELARLASAVTTVNRALGMPAPVISFEPGRWTVAPTGVTLYRVGTVKPVQ 395

Query: 256 KNLVIVDSSVE---------------AHVPDYLLY----QESATIYPNTGPYTAMVCGRS 296
                 D +                  ++   L       + A    ++      V G  
Sbjct: 396 LAGTAKDKAGNPVTERVYVSVDGGMSDNIRPALYGSDYTAKIANREGSSETKLCRVVGMH 455

Query: 297 CLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           C +GDI          ++ GD ++      Y     + +N   +P +   +       IR
Sbjct: 456 CESGDIIVNEVRLPADIQRGDVLAVPVTGAYGRTMASNYNQALIPAVVAVSEQDAHVMIR 515

Query: 356 EFSYNDYYN 364
             +  D  +
Sbjct: 516 RQTVEDLLD 524



 Score = 74.4 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 17/154 (11%), Positives = 44/154 (28%), Gaps = 9/154 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
            +P Y+ID   +                N    +  A K   +  +   + +      + 
Sbjct: 37  GSPLYVIDTDDVRVRATKFVKSAANAFNNTVTHVSFAGKALLSKEICRIVTESGMLIDTC 96

Query: 59  SLYEVMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           ++ E+ +       G     +   K        +      I+ +  ++  +  + A++L 
Sbjct: 97  TMGEMRIALAAGVPGRRLVLHGNNKSDAEIELAITEGFAKIVVDEPNEPARIAEIAKRLG 156

Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKC 147
           K+    LR+   +               + G   
Sbjct: 157 KRARVMLRVTSGIHAGGHEFVSTAHEDQKFGVAL 190


>gi|149390765|gb|ABR25400.1| diaminopimelate decarboxylase [Oryza sativa Indica Group]
          Length = 97

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 4/83 (4%)

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348
           T  + G  C + D  G+         G  +   D   Y ++  + +N    P       D
Sbjct: 14  TFDIVGPVCESADFLGKDRELPTPDKGAGLVVHDAGAYCMSMASTYNLKLRPPEYWVEDD 73

Query: 349 GTIKAIRE-FSYND---YYNNLS 367
           G+I  IR   S++D   +++NLS
Sbjct: 74  GSIAKIRRGESFDDYMKFFDNLS 96


>gi|322691946|ref|YP_004221516.1| diaminopimelate decarboxylase [Bifidobacterium longum subsp. longum
           JCM 1217]
 gi|320456802|dbj|BAJ67424.1| putative diaminopimelate decarboxylase [Bifidobacterium longum
           subsp. longum JCM 1217]
          Length = 518

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 67/249 (26%), Gaps = 34/249 (13%)

Query: 150 KIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFT 205
               ++  + G   H          F      M+   +  +      +  I LGGG    
Sbjct: 265 LANQDVLELVGAHSHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVA 324

Query: 206 DKDYPVKDFCQR-----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254
             D                            +  I  EPG  IV         V  I   
Sbjct: 325 YTDGEDSMDIDVELTRLADAVNSTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGTIKHV 384

Query: 255 I--------------KNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRS 296
                          +  V VD  +  ++   L   +     A    +     A VCG  
Sbjct: 385 HLSDAKDSDGNPIAERVYVSVDGGMSDNIRPALYGADYTARLANRTGSAETMLARVCGMH 444

Query: 297 CLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           C +GDI          +K GD ++      Y     + +N   +P +   +  G    +R
Sbjct: 445 CESGDIVVHEVQLPADLKRGDILAVPVTGAYGRTMASNYNQALIPVVVAVSESGAHVMLR 504

Query: 356 EFSYNDYYN 364
             + +D  N
Sbjct: 505 RQTVDDLLN 513



 Score = 79.4 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 47/157 (29%), Gaps = 9/157 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
            +P YLID  +++                +   +  A K F +  +   + +      + 
Sbjct: 22  GSPLYLIDTDEVVARARHFVRAAAEAFNTSTTHVSFAGKAFLSKEVVRLVTEAGMFVDTC 81

Query: 59  SLYEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           ++ E+ +       G     +   K  E    A+      I+ +   +  +    A+KL 
Sbjct: 82  TMGEMKIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKIVIDEPDEPERVAAIARKLG 141

Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKCKDK 150
           K+    LR+   V               + G      
Sbjct: 142 KRARVMLRVTVGVHAGGHEYISTAHEDQKFGVPLLAA 178


>gi|307253178|ref|ZP_07535055.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306859345|gb|EFM91381.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 170

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 21/145 (14%), Positives = 46/145 (31%), Gaps = 5/145 (3%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y+  +  L  +              +  A+K  +   + + + +   G    S  E
Sbjct: 26  GTPAYIYSRATLERHWHAFDKAFGAHPHLICFAVKSNSNIALLNVMVRLGSGFDIVSQGE 85

Query: 63  VMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--K 117
           +              ++   K       A+          ++++L++  + A +L K   
Sbjct: 86  LERVLAAGGEPSKVVFSGVAKSHSEIQRALEVGIRCFNIESIAELHRINEVAGQLGKIAP 145

Query: 118 IGLRINPSVSYSKFILADPNRPFSR 142
           I LR+NP V              ++
Sbjct: 146 ISLRVNPDVDAHTHPYISTGLKENK 170


>gi|119026435|ref|YP_910280.1| diaminopimelate decarboxylase [Bifidobacterium adolescentis ATCC
           15703]
 gi|118766019|dbj|BAF40198.1| probable diaminopimelate decarboxylase [Bifidobacterium
           adolescentis ATCC 15703]
          Length = 524

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 62/242 (25%), Gaps = 35/242 (14%)

Query: 158 VNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213
           + G+  H          F      M+   +  +      +  + LGGG      D     
Sbjct: 278 LVGVHSHIGSNIHDADAFIQAAKRMMLLRKTFYATDAYTLPEVDLGGGYSVAYTDGEDSM 337

Query: 214 FCQR-----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD 262
                          +       S  I  EPG   V  T      V  +     +    D
Sbjct: 338 DIDVELGRLADAVSTVNRALGMPSPVISFEPGRWTVAPTGVTLYRVGTVKPVELSGEAKD 397

Query: 263 SSVE---------------AHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIF 303
            S                  ++   L   +     A    +       V G  C +GDI 
Sbjct: 398 KSGNPVTERVYVSVDGGMSDNIRPALYGSDYTARLANRKGSEQTKLCRVVGMHCESGDIV 457

Query: 304 GEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
                    +K GD ++      Y     + +N   +P +      G    IR  + +D 
Sbjct: 458 VNEVRLPADIKRGDILAVPVTGAYGRTMASNYNQALIPAVVGVGEAGAHVMIRRQTIDDL 517

Query: 363 YN 364
            +
Sbjct: 518 LS 519



 Score = 77.5 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 17/154 (11%), Positives = 44/154 (28%), Gaps = 9/154 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
            +P Y+ID   +            +   N    +  A K   +  +   + +      + 
Sbjct: 34  GSPLYVIDTDDVRARATKFVHAASHAFNNTVTHVSFAGKALLSKEICRIVTESGMLIDTC 93

Query: 59  SLYEVMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           ++ E+ +       G     +   K        +    + I+ +   +  +    A++L 
Sbjct: 94  TMGEMRIALAAGVPGRRLVLHGNNKSDAEIELAIEQGFNKIVVDEPGEPERIATIAKRLG 153

Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKC 147
           K+    LR+   +               + G   
Sbjct: 154 KRARVMLRVTSGIHAGGHEFVSTAHEDQKFGVAL 187


>gi|154488019|ref|ZP_02029136.1| hypothetical protein BIFADO_01587 [Bifidobacterium adolescentis
           L2-32]
 gi|154083492|gb|EDN82537.1| hypothetical protein BIFADO_01587 [Bifidobacterium adolescentis
           L2-32]
          Length = 524

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 62/242 (25%), Gaps = 35/242 (14%)

Query: 158 VNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213
           + G+  H          F      M+   +  +      +  + LGGG      D     
Sbjct: 278 LVGVHSHIGSNIHDADAFIQAAKRMMLLRKTFYATDAYTLPEVDLGGGYSVAYTDGEDSM 337

Query: 214 FCQR-----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD 262
                          +       +  I  EPG   V  T      V  +     +    D
Sbjct: 338 DIDVELGRLADAVSTVNRALGMPAPVISFEPGRWTVAPTGVTLYRVGTVKPVELSGEAKD 397

Query: 263 SSVE---------------AHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIF 303
            S                  ++   L   +     A    +       V G  C +GDI 
Sbjct: 398 KSGNPVTERVYVSVDGGMSDNIRPALYGSDYTARLANRKGSEQTKLCRVVGMHCESGDIV 457

Query: 304 GEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
                    +K GD ++      Y     + +N   +P +      G    IR  + +D 
Sbjct: 458 VNEVRLPADIKRGDILAVPVTGAYGRTMASNYNQALIPAVVGVGEAGAHVMIRRQTIDDL 517

Query: 363 YN 364
            +
Sbjct: 518 LS 519



 Score = 78.6 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 18/154 (11%), Positives = 44/154 (28%), Gaps = 9/154 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
            +P Y+ID   +            +   N    +  A K   +  +   + +      + 
Sbjct: 34  GSPLYVIDTDDVRARATKFVHAASHAFNNTVTHVSFAGKALLSKEICRIVTESGMLIDTC 93

Query: 59  SLYEVMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           S+ E+ +       G     +   K        +    + I+ +   +  +    A++L 
Sbjct: 94  SMGEMRIALAAGVPGRRLVLHGNNKSDAEIELAIEQGFNKIVIDEPDEPARIAAMAKRLG 153

Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKC 147
           K+    LR+   +               + G   
Sbjct: 154 KRARVMLRVTSGIHAGGHEFVSTAHEDQKFGVAL 187


>gi|73979727|ref|XP_532874.2| PREDICTED: similar to Ornithine decarboxylase (ODC) isoform 1
           [Canis familiaris]
          Length = 331

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/275 (16%), Positives = 82/275 (29%), Gaps = 38/275 (13%)

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF 172
               K+ LRI    S +   L+       +      ++      +V G+ FH        
Sbjct: 16  HPKAKLVLRIATDDSKAVCRLSVKFGATLKTSRLLLERARELNIDVIGVSFHVGSGCTDP 75

Query: 173 LCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSE 223
             F   + +    F         +  + +GGG   ++      +           K F  
Sbjct: 76  ETFVQAISDARCVFDMGAEVGFNMYLLDIGGGFPGSEDVKLKFEEITSVINPALDKYFPA 135

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVL-------------------------DISENIKNL 258
              V++  EPG   V +  TL   ++                          +++ +   
Sbjct: 136 DSGVRVIAEPGRYYVASAFTLAVNIIAKKLVLKEQTGSDDEDESSEQTFMYYVNDGVYGS 195

Query: 259 VIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRI 318
                   AHV   L  +           Y+  + G +C   D   E      + +GD +
Sbjct: 196 FNCILYDHAHVKPLLQKRPKPD----EKYYSTSIWGPTCDGLDRIVERCDLPEIHVGDWM 251

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353
            FE++  Y +   + FNG   PTI       T + 
Sbjct: 252 LFENMGAYTVAAASTFNGFQRPTIYYVMSGPTWQL 286


>gi|226823225|ref|NP_001017568.2| ornithine decarboxylase antizyme inhibitor [Danio rerio]
          Length = 454

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/367 (12%), Positives = 108/367 (29%), Gaps = 42/367 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           K+ ++  D   ++              ++    +K  ++  + + L     G   S+ +E
Sbjct: 39  KSAFFAADLGVIVQQQARWRNKMDQ--IRPFYTVKSNSSPVVVELLASLGTGFICSNKHE 96

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + L        +        K       A   N   ++ +  +++ K   +     K + 
Sbjct: 97  LDLVKGFGVSSQDIILGGTCKQLSHIKYAAKHNIPLLVCDNEAEMRKIA-RCHPKAKVLL 155

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           L  + S    + +               +         V G+ F+     +    FS  +
Sbjct: 156 LLTSESCCEKEEMAIPFGSTLKDCRRLLECAAGELNLQVTGVKFNIPSCCQEVEKFSRAV 215

Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ-----IYL 231
                 F        ++  + +GGG   +++     +  Q LK   + Y  +     I  
Sbjct: 216 SEARCVFDMGEELGFEMNILDIGGGFDGSEEQLDKVN--QMLKPMLDMYFPRSTGLSIIA 273

Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS---------VEAHVPDYLLYQ------ 276
           EPG   V++  TL   ++D     ++                   H+ D +         
Sbjct: 274 EPGAYYVSSAFTLAVNIIDKKTVARDCSAQPHDALSANDEPEFLYHINDGVYGSFASKLL 333

Query: 277 ---------ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
                        +  +   +++ + G S    D+  E      + +GD + F +     
Sbjct: 334 CEDSIATPLAHKHVSADEPLFSSSLWGPSEDDLDLVMERCLLPELSVGDWLLFRNAGA-- 391

Query: 328 INRKNWF 334
               + F
Sbjct: 392 SALGSAF 398


>gi|218190654|gb|EEC73081.1| hypothetical protein OsI_07046 [Oryza sativa Indica Group]
          Length = 297

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 56/201 (27%), Gaps = 12/201 (5%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+YL  K +++ N        +     +  A+K      +   L +   G    S  E+
Sbjct: 97  TPFYLYSKPQVVRNFTAYRDALEGLRSIVGYAVKANNNLRVLQLLRELGCGAVLVSGNEL 156

Query: 64  MLG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIG 119
            L     F      +N       ++     +   +  ++   L      A+       + 
Sbjct: 157 RLALRAGFDPTRCIFNGNGKTLEDLVLAAESGVFVNIDSEFDLENIVTAARVAGKKVPVL 216

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLMFHNNCENKS 171
           LRINP V              S+ G + +            S    + G+  H       
Sbjct: 217 LRINPDVDPQVHPYVATGNKTSKFGIRNEKLQWFLDSIKSYSNDITLVGVHCHLGSTITK 276

Query: 172 FLCFSAMLKNIEKEFGHFITQ 192
              +   L          + +
Sbjct: 277 SQPYIVELAPPLPALLCELFE 297


>gi|125581938|gb|EAZ22869.1| hypothetical protein OsJ_06556 [Oryza sativa Japonica Group]
          Length = 200

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 52/179 (29%), Gaps = 12/179 (6%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+YL  K +++ N        +     +  A+K      +   L +   G    S  E+
Sbjct: 21  TPFYLYSKPQVVRNFTAYRDALEGLRSIVGYAVKANNNLRVLQLLRELGCGAVLVSGNEL 80

Query: 64  MLG-HEKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIG 119
            L     F      +N       ++     +   +  ++   L      A+       + 
Sbjct: 81  RLALRAGFDPTRCIFNGNGKTLEDLVLAAESGVFVNIDSEFDLENIVTAARVAGKKVPVL 140

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLMFHNNCENK 170
           LRINP V              S+ G + +            S    + G+  H      
Sbjct: 141 LRINPDVDPQVHPYVATGNKTSKFGIRNEKLQWFLDSIKSYSNDITLVGVHCHLGSTIT 199


>gi|1834397|emb|CAA69402.1| ornithine decarboxylase [Crithidia fasciculata]
          Length = 721

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/295 (14%), Positives = 92/295 (31%), Gaps = 25/295 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y+ID  +++  +    +  +   V+   A+KC     + + L     G   +S  E+ 
Sbjct: 288 PFYMIDLGRVVEQMARWRH--ELPMVRPHFAVKCNPNLAIMEVLGALGAGFDCASKDEIH 345

Query: 65  LGHEKF---GGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           L  +       +   +    K      +A       +  + V ++ K          +  
Sbjct: 346 LVLDNHLVDSPDDIVFANPCKQLGDLREARACGVTYVTVDNVPEMEKIGR--MLPSARAI 403

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +RI  + + +K   +          E            V G+ FH    N     + + L
Sbjct: 404 IRIKTNDAAAKCAFSTKFGAGMDDVESLLQAARQHNVEVYGVSFHVGSGNGDQSAYVSAL 463

Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEFSEKYS----V 227
           ++  + F     +      + +GGG   T+          +   + ++   E+      V
Sbjct: 464 RDSYRVFQLAAGYGFNCTVLDIGGGYPGTEPIPGSGETSFETIARAMRPVLEELFGGGDV 523

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISE----NIKNLVIVDSSVEAHVPDYLLYQES 278
            I  EPG      T  L   V         +++           ++ +   YQ  
Sbjct: 524 TIISEPGRYFTAATHALAMNVFATRTLRLSDVEKENCQAFQNVVNMDEPEEYQYY 578



 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 19/46 (41%)

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
           + G +C + D   +      +K+GD +   D+  Y       FNG 
Sbjct: 663 IFGPTCDSMDCILKKQPFPEMKLGDWLLAPDMGSYTTAAGCPFNGF 708


>gi|196013974|ref|XP_002116847.1| hypothetical protein TRIADDRAFT_60902 [Trichoplax adhaerens]
 gi|190580565|gb|EDV20647.1| hypothetical protein TRIADDRAFT_60902 [Trichoplax adhaerens]
          Length = 393

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 54/348 (15%), Positives = 109/348 (31%), Gaps = 33/348 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+YL+D   ++N   T  +         L A+K    + +  TL     G   +S  E+ 
Sbjct: 36  PFYLVDISDVINKYKTLFFKVFFITHIFLTAMKSNPDFQIAATLCGLGTGLDVASAGEIE 95

Query: 65  LGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                    E   Y+   K       A   N   + F++  +L++ K         + L 
Sbjct: 96  TAVAVGLKDEDVIYSNTCKGISHLKVAAKENLTQMTFDSEVELHRIKRLYPSARLVLRLL 155

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +    S+S+  L                  +    NV G  FH   E  S   ++  ++ 
Sbjct: 156 V--DDSHSELKLGVKAGASFSRVPHLLKVAKELGLNVIGTSFHVGSECGSPDAYAKAIEK 213

Query: 182 IEKEFGHF---ITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEKYSVQIYLEPG 234
             + F        +   + +GGG      +                F     V+I  EPG
Sbjct: 214 SRRVFDIAKGLGMKFNLLDIGGGYPGQINELFTNISRIINKALDIHFPSDSGVRIISEPG 273

Query: 235 EAIVTNTTTLNTTVL---------DISENIKNLVIVDSSVEAHVPDYLLYQESAT----- 280
           +    +++ L   ++         D           +  +  H+ + ++    +      
Sbjct: 274 QYFSCSSSILVANIISKRIRFEDDDTQIEGYPSDKENMEITYHINEGVIGAFISKLIINL 333

Query: 281 -------IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321
                  I  N   Y + + G +C   D     +    +++G+ + +E
Sbjct: 334 LYIPKKLIKSNEKCYRSSMWGPTCTPVDQILSDYNLPEMEVGEWVYYE 381


>gi|225352614|ref|ZP_03743637.1| hypothetical protein BIFPSEUDO_04240 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225156808|gb|EEG70202.1| hypothetical protein BIFPSEUDO_04240 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 529

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 33/249 (13%), Positives = 63/249 (25%), Gaps = 35/249 (14%)

Query: 151 IESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHFITQIEWISLGGGIHFTD 206
              ++  + G+  H          F      M+   +  +      +  + LGGG     
Sbjct: 276 RHQDVLELVGVHSHIGSNIHDADAFIQAAKRMMLLRKTFYATDAYTLPEVDLGGGYSVAY 335

Query: 207 KDYPVKDF-----------CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI 255
            D                    +       +  I  EPG   V  T      V  +    
Sbjct: 336 TDGEDSMDLDTELARLADAVTTVNRALGMPAPVISFEPGRWTVAPTGVTLYRVGTVKPVQ 395

Query: 256 KNLVIVDSSVE---------------AHVPDYLLY----QESATIYPNTGPYTAMVCGRS 296
                 D +                  ++   L         A    ++      V G  
Sbjct: 396 LAGTAKDKAGNPVTERVYVSVDGGMSDNIRPALYGSDYTARIANREGSSETKLCRVVGMH 455

Query: 297 CLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR 355
           C +GDI          ++ GD ++      Y     + +N   +P +   +       IR
Sbjct: 456 CESGDIIVNEVRLPADIQRGDVLAVPVTGAYGRTMASNYNQALIPAVVAVSEQDAHVMIR 515

Query: 356 EFSYNDYYN 364
             + +D  +
Sbjct: 516 RQTVDDLLD 524



 Score = 77.9 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 17/154 (11%), Positives = 44/154 (28%), Gaps = 9/154 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
            +P Y+ID   +                N    +  A K   +  +   + +      + 
Sbjct: 37  GSPLYVIDTDDVRARAAKFVKSAANAFNNTVTHVSFAGKALLSKEICRIVTESGMLIDTC 96

Query: 59  SLYEVMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           ++ E+ +       G     +   K        +      I+ +  ++  +  + A++L 
Sbjct: 97  TMGEMRIALAAGVPGRRLVLHGNNKSDAEIELAITEGFAKIVVDEPNEPARIAEIAKRLG 156

Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKC 147
           K+    LR+   +               + G   
Sbjct: 157 KRARVMLRVTSGIHAGGHEFVSTAHEDQKFGVAL 190


>gi|218261897|ref|ZP_03476576.1| hypothetical protein PRABACTJOHN_02247 [Parabacteroides johnsonii
           DSM 18315]
 gi|218223711|gb|EEC96361.1| hypothetical protein PRABACTJOHN_02247 [Parabacteroides johnsonii
           DSM 18315]
          Length = 181

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 53/167 (31%), Positives = 84/167 (50%), Gaps = 2/167 (1%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE 68
           ++++ L  NL     +++ AGV ++LA K FA W  F  + +Y+  +T+SS +E  L  E
Sbjct: 1   MEEKLLRRNLSLIKSVKEKAGVNIILAFKAFAMWKAFPIVREYIPYSTASSKFEARLAFE 60

Query: 69  KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD--KAQKLHKKIGLRINPSV 126
           + G   H Y+ AY + +   +L     + FN+++Q  +F    KA       GLRINP  
Sbjct: 61  EMGSRAHTYSPAYTEADFPEILRYSSHVTFNSLTQFERFYPMVKADGNRVSCGLRINPEY 120

Query: 127 SYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFL 173
           S  +  L +P  P SR+G       +     V GL FH  CE+ S+ 
Sbjct: 121 SDVETDLYNPCAPGSRMGVVSDLLGDKLPDGVEGLHFHTLCESSSYD 167


>gi|145640802|ref|ZP_01796384.1| diaminopimelate decarboxylase [Haemophilus influenzae R3021]
 gi|145274316|gb|EDK14180.1| diaminopimelate decarboxylase [Haemophilus influenzae 22.4-21]
          Length = 105

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 27/98 (27%), Gaps = 5/98 (5%)

Query: 269 VPDYLLYQESATIYPNTG----PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
           +   L       I  +           V G  C   D  G+      +  GD I+     
Sbjct: 2   IRPALYEAYMNIIEIDRTLAREKAIYDVVGPVCETSDFLGKQRELS-IAEGDYIAQCSAG 60

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
            Y  +  + +N        + + D +    R  +  + 
Sbjct: 61  AYGASMSSNYNSRARTAEVLVDGDQSYLIRRRETLQEL 98


>gi|86742732|ref|YP_483132.1| diaminopimelate decarboxylase [Frankia sp. CcI3]
 gi|86569594|gb|ABD13403.1| Diaminopimelate decarboxylase [Frankia sp. CcI3]
          Length = 484

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 50/412 (12%), Positives = 104/412 (25%), Gaps = 94/412 (22%)

Query: 30  VKLLLALKCFAAWGMFDTL----------------------------------------- 48
            ++  A+K  +   + D L                                         
Sbjct: 61  AEVCYAVKANSFPPILDALLRGTGPDIPRSGRERSDSSPGASPTDARSDARSDARSDARS 120

Query: 49  -------NQYMDGTTSSSLYEVMLGHEKFG-------GETHAYNVAYKDCEIDAVLSNC- 93
                   + +DG   SS +EV L    +G           A         + A++S   
Sbjct: 121 DARTGASGRGIDGFEVSSAHEVRLAQAAYGRVDSARRPRLVASGPGKSMTLLTALVSADV 180

Query: 94  DTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNR--------PFSRLGE 145
           D +   +  +L +    A +L +++   +  + +      +            P + +  
Sbjct: 181 DVVNVESFGELRRLDAVAARLGRRVRAAVRVNPAQVGLAGSLQMGGRPSAFGIPETEVPA 240

Query: 146 KCKDKIESEIKNVNGLMFHNNCENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGG 201
             +   +    +V G   H    N             L    +       ++  + +GGG
Sbjct: 241 ALELAADLAHIDVVGFHVHAVSGNLDAAAHLGYVRWCLDFAVRTAAVAGIELRMVDVGGG 300

Query: 202 IHFTDKD-------YPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254
                +        + +  F + L         ++  EPG  +V ++      V+D+  +
Sbjct: 301 FGVPFEPDRRGDRPFDLIRFGEGLSSLPVPDGTRVIFEPGRMLVADSGWYAAEVIDVKHS 360

Query: 255 IKNLVIVDSSVEAH--VPDYLLYQESATIYPNTGP----------------YTAMVCGRS 296
                ++      H  +P       +  +   +G                     V G  
Sbjct: 361 YGTEFVILRGGIHHFALPTSWEIVHNFAVVERSGRNGGPEPEHTREAVVEGRPVTVVGEL 420

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPTIAVKNV 347
           C   D          V+ GD + F     Y        F G           
Sbjct: 421 CTPEDTLARDITVDRVRPGDVVVFPMAGAYGYEFALPDFLGHPRARRIELRG 472


>gi|16520033|ref|NP_444153.1| conserved uncharacterized 49.9 kDa enzyme; second copy encoded by
           pNGR234b [Sinorhizobium fredii NGR234]
 gi|2496780|sp|P55709|Y4YA_RHISN RecName: Full=Uncharacterized protein y4yA
 gi|2182725|gb|AAB91940.1| conserved uncharacterized 49.9 kDa enzyme; second copy encoded by
           pNGR234b [Sinorhizobium fredii NGR234]
          Length = 457

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 55/410 (13%), Positives = 108/410 (26%), Gaps = 66/410 (16%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P  L+    L  NL     +     ++  +    K   + G+         G   SSL
Sbjct: 39  GSPLNLVWPDALRENLAALKGVLTERRLEHAIYYGAKANKSPGLMQAALSAGAGLDVSSL 98

Query: 61  YEVMLGHE-KFGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           YE+         G        A        +++    I  ++  +L              
Sbjct: 99  YELRDARRLGADGARLVATGPAKTSAFHQELINCNALISVDSPEELEDL--IHGLPADAG 156

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS-A 177
              I   +       +    P   +               +GL FH +   +     +  
Sbjct: 157 QQSILLRLRPRDQSKSRFGMPPDAVVHCLARLAGEGRVRFDGLHFHLSGYRRETRVAALR 216

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKD----------------------------- 208
              ++  E          I +GGG+     D                             
Sbjct: 217 EAADLIAEARRMGFFPGMIDIGGGLPIQYVDRARYKAHLAAQAPEDYRTGKIPDSFYPYG 276

Query: 209 -------------YPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTT-------- 247
                            +  + +  +  +  + + +EPG A+                  
Sbjct: 277 STLSAADWLHRLLEAEMNQGRSVAGYLAREGLTLAMEPGRALADQAAITVFRISRVKALG 336

Query: 248 ----VLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF 303
               V+ +  +  +      + E  +   L+    AT+     P  A + G SCL  D+ 
Sbjct: 337 PDSHVIFVEGSSFSACETWFASEFLIDPILVPATKATVQLP--PVRAYLAGHSCLDEDVI 394

Query: 304 GEFH--FEKPVKIGDRISFEDVAGYNIN-RKNWFNGINMPTIAVKNVDGT 350
                 F    + GD + + +  GY ++  +N F+   MP       D  
Sbjct: 395 SNRWLTFPTAPRAGDLLVYANTGGYQMDLLENEFHRHPMPARFCVIEDAE 444


>gi|219115001|ref|XP_002178296.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217410031|gb|EEC49961.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 392

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 47/393 (11%), Positives = 96/393 (24%), Gaps = 71/393 (18%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSSLYEVM 64
           + L D   +   L     +     V+ L ALKC     +   L Q    G   +SL EV 
Sbjct: 4   FVLCDLNIIRKKLQVWRQLFPR--VRPLFALKCNPDPMVAAVLGQSGVCGFDCASLPEVE 61

Query: 65  LGHEKF--GGETHAYNVAYKDCEIDAV----------LSNCDTIIFNTVSQLNKFKDKAQ 112
           L  +          Y    +  +   +              + +     +   +   ++ 
Sbjct: 62  LALKSVSNNPRLLVYANPQRAEKDLEMALSLGVRALTFDGPEELHKVHRAYQQRLAAQSN 121

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE---- 168
               ++ LRI      S   L +             +   +    + G+ FH        
Sbjct: 122 SRPPQMILRILVPDESSTVPLGEKFGASPARIASLANLALTLGLRIIGVSFHCGSGNHDP 181

Query: 169 -------------NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK-------- 207
                         ++        K                 +GG               
Sbjct: 182 RAYRIAIELAAEAIQTIDLVQKDHKAACWLLDIGGGYPGLDGMGGDAGRFCGSKVKLDES 241

Query: 208 --DYPVKDFCQ--------RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV--------- 248
                  +  +         L +      +    EPG   V     L + +         
Sbjct: 242 LVQEDETETTEKVSNIVSPLLNKLFPHEQIHFVSEPGRYFVEGAFALCSRIYQAQSEYAS 301

Query: 249 ----------LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCL 298
                       I++ ++ +               L+ +S           +++ G S  
Sbjct: 302 ESRHTVVRRHYFIAQGVQGMFKDCLLCNEVFTPVPLFVDSCCTDVI--RIPSVIHGPSGE 359

Query: 299 AGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
             DI    H    ++ GD + F+ +  Y ++  
Sbjct: 360 LYDIIARDHPLPFLEAGDWLLFDRMGAYTLSIA 392


>gi|241573001|ref|XP_002403147.1| ornithine decarboxylase, putative [Ixodes scapularis]
 gi|215500179|gb|EEC09673.1| ornithine decarboxylase, putative [Ixodes scapularis]
          Length = 319

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 54/323 (16%), Positives = 107/323 (33%), Gaps = 31/323 (9%)

Query: 35  ALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVA--YKDCEIDAVLS 91
           A+KC +   +  TLN        S+  E+ +  +     +   Y            A   
Sbjct: 1   AVKCNSDPVVLRTLNSQGVNFDCSNKGEIKVVLDMGVTPDRVVYANTVKCTSHLRFAEKH 60

Query: 92  NCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI 151
               + F++  +L+K  DK    + ++ LRI  S   S   +      +    EK     
Sbjct: 61  GVTLMTFDSEEELSKINDK----NARLLLRIAASEYGSHQTMNAKYGSYPHEVEKLMKLA 116

Query: 152 ESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIH-FTDK 207
             +  N+ G+ FH  C       F+  +      F         +  + +GGG      K
Sbjct: 117 FFKGLNIVGVSFHVGCSFTHTEIFAQTIAEARGVFDSGARIGFSMTLLDIGGGFPGGVRK 176

Query: 208 DYPVKDFCQRLKEFSEKYSV-----QIYLEPGEAIVTNTTTLNTTVL----------DIS 252
               K   + +K   +++       +I  EPG+  VT+  TL T V+           ++
Sbjct: 177 LERFKQVAETIKCAIDEHFPLSSGVKIIGEPGQFFVTSAYTLVTKVIAKRRKDVTIDGVA 236

Query: 253 ENIKNLVIVDSSVEAHVPDYLL-----YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFH 307
              +N+ I +S       D        Y+  +  +         +   +C   D   +  
Sbjct: 237 HRHENIFINESKYNCIPRDLYPFMDITYKPLSPPHDRPREVLTTLWAATCNPMDCILDKQ 296

Query: 308 FEKPVKIGDRISFEDVAGYNINR 330
               V + + +  +++  Y +  
Sbjct: 297 PFFEVDVDEWMLMDNMGAYTLVL 319


>gi|323456327|gb|EGB12194.1| hypothetical protein AURANDRAFT_61431 [Aureococcus anophagefferens]
          Length = 1068

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 42/383 (10%), Positives = 95/383 (24%), Gaps = 41/383 (10%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE 68
            D       L   +          + A K      M     +   G   +S  E     E
Sbjct: 349 YDLDAWETQLRACVGAFGPTFEHAI-ACKSNPLALMLRRAAELGFGVECASATEAAHAVE 407

Query: 69  K---FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI----GLR 121
                 G     +      E+   L        + + +L++  +   ++ +      G+R
Sbjct: 408 ACGVAPGRVVFDSPCKTRVELAYALETGLHCNLDNLDELDRATEIVARMGRPPAGRVGVR 467

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKI--------ESEIKNVNGLMFHNNCENKSFL 173
           +NP V          +   S+ G    D           +    +  +  H         
Sbjct: 468 VNPRVGAGTIAALSVSTSASKFGVDIGDAAQRADLLAKFAARPWLTSVHVHVGSGGMGLG 527

Query: 174 CFSAMLKNIEKEFGHFITQ--IEWISLGGGIHFTDKDY---PVKDFCQRLKEFSEKYS-- 226
              A +               +  + +GGG+              +   L++ + +    
Sbjct: 528 QLVAGVAAAVAFANDARETNAVACVDIGGGLPVDYGSDAAPDFAGYAALLRDATPELFDG 587

Query: 227 -VQIYLEPGEAIVTNTTTLNTTVLD-----------ISENIKNLVIVDSSVEAHVPDYLL 274
              +  E G ++   +  L + +             +       +    + +        
Sbjct: 588 TYAVVTEFGASLNAKSGFLASRIEWLKDQPTRRLAIVHFGADLCLRQAYTADHGRRWAAF 647

Query: 275 YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNW 333
                    +     A + G  C  GDI  +       ++ GD +   D    +++  + 
Sbjct: 648 DAAGRAFPHDAPLADAAIGGPLCFQGDILADDLKLPAALRAGDLVVMRDAGANSLSLFSR 707

Query: 334 FNGINMPTIAVKNVDGTIKAIRE 356
                 P +      G     R 
Sbjct: 708 HCSRVAPPVY-----GFRTVARR 725


>gi|288918894|ref|ZP_06413238.1| Diaminopimelate decarboxylase [Frankia sp. EUN1f]
 gi|288349746|gb|EFC83979.1| Diaminopimelate decarboxylase [Frankia sp. EUN1f]
          Length = 529

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 50/389 (12%), Positives = 94/389 (24%), Gaps = 71/389 (18%)

Query: 28  AGVKLLLALKCFAAWGMFDTLNQYM---DGTTSSSLYEVMLG------------------ 66
               L  A+K  +   + D L       DG   SS  E+ L                   
Sbjct: 114 PWAHLYFAVKANSFPPVLDALLAGGHGVDGFEISSARELALATDALARAGQPTQPRPQRQ 173

Query: 67  -----------------HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109
                                 G++ +   A  D          D +   +  +L +   
Sbjct: 174 SQSQLQPPLPPRSRPRLVASGPGKSLSLLRALLDPAAGESSGTVDVVNVESPLELLRIDA 233

Query: 110 KAQKLHKKIGLRINPSVSYSKFILA-DPNRPFSRLGEKCKD-------KIESEIKNVNGL 161
            A +  ++  + +  + +      +       S  G + ++              ++ G 
Sbjct: 234 VATRAGRRSAVALRVNPARVGLAGSLRMGGRPSAFGIEEREVPSAVELARSLPGIDLVGF 293

Query: 162 MFHNNCENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD-------YP 210
             H    N             L    ++       +  + +GGG+    +        + 
Sbjct: 294 HVHAVSGNLDAAAHLEYVRWCLDFAVRQAHEGGFDLRVVDVGGGLGVPFEPDRLGERPFD 353

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-- 268
           +  F   L        V++  EPG  +V +       V D+         V      H  
Sbjct: 354 LDLFGDGLARLRPPTDVRVIFEPGRMLVADCGWYAAEVTDVKRVHGEAFAVLRGGINHFQ 413

Query: 269 VPDYLLYQESATIYPNT-----------GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDR 317
           +P       +  + P                   V G  C   D          ++ GD 
Sbjct: 414 LPTSWEIVHNFAVVPRESWPVGWPRPEVAAGPVTVVGELCTPEDTLARDVTVDRLRAGDV 473

Query: 318 ISFEDVAGYNINRKNW-FNGINMPTIAVK 345
           + F     Y        F G       V 
Sbjct: 474 VVFPMAGAYGYEFAMHEFLGHPRAARIVL 502


>gi|47229384|emb|CAF99372.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 603

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 33/358 (9%), Positives = 88/358 (24%), Gaps = 16/358 (4%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           KT + + D   L+        I  +  ++    +KC ++  + + +     G    +  E
Sbjct: 37  KTAFVVGDLGALMRQHVRWQSI--SPRLQPYFPVKCNSSPAVIEVMASLGLGFVCVNKAE 94

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           + L  E     E    +   K        +  +       ++   FK      + K+ L+
Sbjct: 95  MSLVLEHGVPPEAVILSGVCKQQAHIKYAAKNNIQNLVCENEAELFKISRLHPNAKLLLQ 154

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           ++     ++           +      +  +     V G+ FH     +          +
Sbjct: 155 LSTQAHAAETS--MTFGFSLKSSRHLLEAAKQLGLQVVGVSFHIPSSCQDLQEAYTHALS 212

Query: 182 IEKEFGHFITQ------IEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
             +       +      ++                                 ++     +
Sbjct: 213 DARCVFDMGVESALKPLLDTYFSPLSGVQVLAQPGNFYVASAFCLAVTIMGKKLVNPRWD 272

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGR 295
            +        T  L               +   +           +      Y + + G 
Sbjct: 273 NLAQGEDNEGTEFLYYMNEGIYGPFSCKLLGNSI--SAPSVHKHALCAEEAMYPSSLWGP 330

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353
           S    D   E      + +GD + F ++    +     F  + +P     +     + 
Sbjct: 331 SLDQLDQVVERCLLPELSVGDWLLFPNMGACGL---EDFGSLQLPVYYTVSTSDWFEM 385


>gi|23012520|ref|ZP_00052584.1| COG0019: Diaminopimelate decarboxylase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 274

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 27/244 (11%), Positives = 73/244 (29%), Gaps = 15/244 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P  ++D   +  N             ++  A+K   A  +   L +      ++S+ E+ 
Sbjct: 21  PVMVLDLDVVRENYTAFARAL--PDTRVFYAVKANPAAEVLRLLAEMGSCFDTASVAEIE 78

Query: 65  LGH-EKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG-- 119
           +        +  ++      +   + A+         +  +++ K    ++    + G  
Sbjct: 79  MALSAGATADRVSFGNTIKKERDIVRALKLGIRLFAVDCQAEVEKISRASEAAGIEAGDV 138

Query: 120 ---LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
               RI    + + + L+        +     +       +  G+ FH   +  +   + 
Sbjct: 139 QVFCRILCDGAGADWPLSRKFGCEPEMAVNVLEHAHRHGLHAYGVSFHVGSQQANTEAWD 198

Query: 177 AMLKNIEKEFGHF---ITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYSVQIYL 231
             L +    F         +  ++LGGG       +   V+ +   +     K+      
Sbjct: 199 GALASAAAIFQDCALRGIGLSMVNLGGGFPTKYLKQVPGVETYGDAIFRALTKHFGNRIP 258

Query: 232 EPGE 235
           E   
Sbjct: 259 ETNH 262


>gi|304380085|ref|ZP_07362806.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|304341321|gb|EFM07239.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
          Length = 333

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 43/333 (12%), Positives = 83/333 (24%), Gaps = 35/333 (10%)

Query: 55  TTSSSLYEVMLGHEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112
              +S  E+  G          +       +    AV      I   ++ +L +     +
Sbjct: 1   FEVASQGEIAKGLVFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILE 60

Query: 113 KLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFH 164
              K   + +  +                ++ G          +  +     +++G  FH
Sbjct: 61  DEDKTQHILLRVNLAGPFPNATLHMAGRPTQFGISEDEVDDVIEAALAMPNIHLDGFHFH 120

Query: 165 NNCENK----SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD-------KDYPVKD 213
           +   N              K  +         ++ I+LGGGI           +     +
Sbjct: 121 SISNNLDSNLHVDVVKLYFKKAKAWSEKHQFPLKHINLGGGIGVNYADLTSQFEWDNFVE 180

Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DY 272
             + L    E   V +  E G  IV +     T VLDI +       +            
Sbjct: 181 NFKTLIVEQEMEDVTLNFECGRFIVAHIGYYVTEVLDIKKVHGAWYAILRGGTQQFRLPV 240

Query: 273 LLYQESATIYPNTGPYTA------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
                                          + G+ C   D+F      + +  GD I F
Sbjct: 241 SWQHNHPFDIYRYKDNPYSFEKVSISRQDTTLVGQLCTPKDVFAREIQIEAISTGDVIVF 300

Query: 321 EDVAGYNINRKNW-FNGINMPTIAVKNVDGTIK 352
           +    Y  +  +  F     P           +
Sbjct: 301 KYAGAYGWSISHHDFLSHPHPEFIYLTQTKEDE 333


>gi|238927649|ref|ZP_04659409.1| diaminopimelate decarboxylase [Selenomonas flueggei ATCC 43531]
 gi|238884574|gb|EEQ48212.1| diaminopimelate decarboxylase [Selenomonas flueggei ATCC 43531]
          Length = 347

 Score =  100 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 33/241 (13%), Positives = 68/241 (28%), Gaps = 15/241 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D+ K+  N              +   A+K      +   L++   GT  SS  
Sbjct: 33  PTPFHLYDEAKIRANFRRLRETFAWAPSFREHFAVKALPNPRIVQILHEDGAGTDCSSTP 92

Query: 62  EVML-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           E+++       GE         D   +      +      +  L+     A+       L
Sbjct: 93  ELIISAAAGVKGEEIMLTSN--DTPYEEFQKAIELGAVINLDDLSHLDYMAEHAGLPNLL 150

Query: 121 RINPSVSYSKFILADPNRP-FSRLGEKCKDKIESEIKNVN------GLMFHNNCENKSFL 173
               +            +P  ++ G   +   E   + +       G+            
Sbjct: 151 CFRYNPGNLVEGNDIIGKPVEAKYGLTREQMFEGYRRALEMGVKRFGVHTMVISAELRTE 210

Query: 174 CF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
            F      M +   +        +E+++LGGG     +          +    E+   +I
Sbjct: 211 AFLLTARLMFELAAELKEKLGIHVEFVNLGGGFGIPYRPEQDGIDYDAVGAGIERLYNEI 270

Query: 230 Y 230
            
Sbjct: 271 M 271


>gi|195453356|ref|XP_002073752.1| GK14274 [Drosophila willistoni]
 gi|194169837|gb|EDW84738.1| GK14274 [Drosophila willistoni]
          Length = 812

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 48/304 (15%), Positives = 87/304 (28%), Gaps = 21/304 (6%)

Query: 68  EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVS 127
            K   E   +    +                   ++   +K      +  + LR      
Sbjct: 500 SKVSPERIIFANPCRPISHVEYSRQQKVFDVTVDNEFEVYKLHKHYSNSNLILRFKSEAK 559

Query: 128 YSKFILADPNRPFSRLGEKCKDKIESEIKN-VNGLMFHNNCENKSFLCFSAMLKNIEKEF 186
            +K  L D       +       +   +   V G  FH       F  +   +   ++ F
Sbjct: 560 AAKCPLGDKFGCDPNVNAAALLLLAKALDLKVTGSSFHVGSGCSEFAAYDRAIGKAKQIF 619

Query: 187 GH---FITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
                   ++  + +GGG    + +          Q ++       +QI  EPG   V +
Sbjct: 620 DFGKLIGHKMSLLDIGGGFPGANDEEFEKIANVVNQSVERDFPDPGIQIISEPGRFFVES 679

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPD--------YLLYQE---SATIYPNTGPYT 289
             TL   +    E           +  ++ D         + Y E          + P  
Sbjct: 680 AFTLICKIHAKREVRHPNNGKLELIMYYLNDGVFGSFNNVISYNEFVLPHHYLNRSKPVP 739

Query: 290 AM---VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
                + G +C A D   E  F   +K+GD I F ++  Y       FNG  +P I    
Sbjct: 740 LYKSLLWGPTCDAVDKISEHIFLPHLKLGDLIGFHNMGAYTFPIACEFNGFKVPKILYFQ 799

Query: 347 VDGT 350
            +  
Sbjct: 800 ANKE 803


>gi|316967348|gb|EFV51783.1| putative pyridoxal-dependent decarboxylase, pyridoxal binding
           domain protein [Trichinella spiralis]
          Length = 445

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 47/333 (14%), Positives = 89/333 (26%), Gaps = 33/333 (9%)

Query: 28  AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY---EVMLGHE-KFGGETHAYNVAYKD 83
             VK   +++C     +   LN+        S     E+    +     E   Y    K 
Sbjct: 80  PRVKPFYSVRCNGNEALLQILNRLGLSFECKSKACVTEIESVMKVGVSPEEILYANPCKT 139

Query: 84  CEIDAVLSNC--DTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS 141
            +            ++F+   +L K K         + + ++ + +       +      
Sbjct: 140 AKQVQHAMMRSVRKLVFDNEDELYKVKRFFPTAELILRINVSDTTTTVLSPNLNFGCDPE 199

Query: 142 RLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISL 198
             G             V G+ FH          F+  + +  + F        ++  + +
Sbjct: 200 SQGPSLLVLAMLLDLKVIGISFHVGSNCDDGTLFAEAIAHSRRLFDYATALGHKMRLLDI 259

Query: 199 GGGIHFTDKDYPVKDFCQRLKEFSEKYSV-----QIYLEPGEAIVTNTTTLNTTVLDIS- 252
           GGG    +     +     +    EK+        +  EPG        TL  TV+    
Sbjct: 260 GGGFPGQNMAK-FQAIADEVNRSLEKHFPTDSGVDVVAEPGRFYAEKAFTLCCTVIARRT 318

Query: 253 -----------------ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGR 295
                                    V  S    + D      +         Y   VCG 
Sbjct: 319 VPANQITKNEADRNSFGYTYSINDGVYGSFNCILCDTGKPMATVLKEGREKLYWTSVCGP 378

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
           +  + D+         +  GD I FE++  Y  
Sbjct: 379 TDDSLDLVIAQCRMPMLGEGDVIVFENMGAYTF 411


>gi|33322676|gb|AAQ07072.1|AF496385_1 diaminopimelate decarboxylase [Lactobacillus delbrueckii subsp.
           lactis]
          Length = 219

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 65/203 (32%), Gaps = 16/203 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           +TP  + D  K+   +     + +  GV  ++  A K F+   ++  +N+    T   S 
Sbjct: 16  QTPLQVFDVGKIRQAIRAFKRVFEEEGVDYEVSYASKAFSCLAIYQVINEEGGHTDVVSG 75

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKA--QKLH 115
            E+       F  +  +++   K      +        II +   +++        +   
Sbjct: 76  GELWTAMKAGFPMDKVSFHGNNKSRAELEMAVDQGVGVIILDNFHEIDLLSQILEEKDAS 135

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEK---------CKDKIESEIKNVNGLMFHNN 166
            K+ LR+ P +S          +  S+ G            +  + +    + G+  H  
Sbjct: 136 SKVMLRVTPGISAHTNEYIQTGQVDSKFGFDMESGQADRALELVLANPRMKMAGIHAHIG 195

Query: 167 CENKSFLCFSAMLKNIEKEFGHF 189
            +      F      + +    +
Sbjct: 196 SQIFDVRGFVGCADKLCQLASAW 218


>gi|225387699|ref|ZP_03757463.1| hypothetical protein CLOSTASPAR_01469 [Clostridium asparagiforme
           DSM 15981]
 gi|225046204|gb|EEG56450.1| hypothetical protein CLOSTASPAR_01469 [Clostridium asparagiforme
           DSM 15981]
          Length = 298

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 73/229 (31%), Gaps = 13/229 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +  N          N G K   A+K      +   L +   GT  SS+ 
Sbjct: 29  PTPFHLYDEKGIRENAMKLKQAFAWNKGFKEYFAVKATPNPFILQLLKECGCGTDCSSMT 88

Query: 62  EVMLGHE-KFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+ML     F GE   ++       E          I  +  + +   +D    + + I 
Sbjct: 89  ELMLSEACGFSGEEIMFSSNDTPPEEFAYAARLGAIINLDDFTHIQFLEDTLGYIPETIS 148

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFHNNCEN---- 169
            R NP   +        N   S+ G   +        ++++     G+            
Sbjct: 149 CRFNPGGVFKISNDIMDNPGDSKYGMTTEQMFEAFKILKAKGAKRFGIHAFLASNTVTNE 208

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL 218
              L    + +   K        I +I+L GGI    +     +    +
Sbjct: 209 YYPLLARQLFELAVKLKEETGAHIAFINLSGGIGIPYRPDQEPNDILVI 257


>gi|115961825|ref|XP_001194285.1| PREDICTED: similar to ornithine decarboxylase, partial
           [Strongylocentrotus purpuratus]
          Length = 312

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 42/314 (13%), Positives = 90/314 (28%), Gaps = 19/314 (6%)

Query: 19  DTALYIRKNAGVKLLLA-LKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHA 76
              +    N G     A +KC A   + +TL     G   +S  E+    +     +   
Sbjct: 7   RRVVETLANLGAGFDWATVKCNADRRVVETLANLGAGFDCASKTELRQVLDMGVHPDRII 66

Query: 77  YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADP 136
           Y    K              +    ++    K K      ++ LRI      +   L+  
Sbjct: 67  YANPCKAISHLRFAKKNGVRLMTFDNEEEIIKIKQVFPTARLVLRIWAEDKTAVIPLSVK 126

Query: 137 NRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQI 193
                    +  +  ++    V G+ FH    + +   + A +++    +         +
Sbjct: 127 FGCPLHEVRRLLEAAKNLDLAVEGICFHVGSGSGNPESYYAAIRDARTAYDIGNDIGHDL 186

Query: 194 EWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE 253
             I +GGG    +      +   ++     +Y     L   E            + DIS 
Sbjct: 187 RIIDIGGGFPGKESSSIPFEKVYQMSIVPNEYPGSGLLTMYE--------NWNDIKDISA 238

Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESATIYPNT------GPYTAMVCGRSCLAGDIFGEFH 307
             +    + ++V + + D  L                     +++ G +    D      
Sbjct: 239 TPEVAYYISNNVYSTLGDSFLIGAKFDAKVLKSSNNDGSERPSVLWGNTTSRVDCVRRHC 298

Query: 308 FEKPVKIGDRISFE 321
               ++ GD + F 
Sbjct: 299 LLPELEEGDWLVFR 312


>gi|213649626|ref|ZP_03379679.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
          Length = 306

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 84/268 (31%), Gaps = 45/268 (16%)

Query: 141 SRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHF----ITQIEWI 196
            +  E C+  +     ++ GL  H   +      F+   K +  E          + + I
Sbjct: 36  EQAEETCRRILAMPYVHLRGLHMHVGDQVPESEPFAKATKVLVDESRRLEEVLGIKFDLI 95

Query: 197 SLGGGIHFTDKDYPV---------------KDFCQRLKEFSEKYSVQ--IYLEPGEAIVT 239
           ++GGGI    K                   +DF   +     K+     I +EPG  +  
Sbjct: 96  NVGGGIPVPYKYDDENGDPLKDNMYAGITAQDFADAVIREVHKWRTDVEICIEPGRKVTG 155

Query: 240 NTTTLNTTV----------------LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
           +   L T V                  +     +      S   H  D+  Y  +A+   
Sbjct: 156 SAAVLLTEVSCEKRKTNYDLNGNVECHVEWKFVDAGYSVLSDSQHF-DWFFYVYNASRMT 214

Query: 284 NTGPYTAMVCGRSCLAGDIF------GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                   + G  C  GD F       EF   K   +GD ++F D   Y I  +  +N  
Sbjct: 215 AAHDAWIKLAGPLCDGGDYFHMGVKGEEFLLPKETHVGDIVAFLDAGAYTIESQTVYNNR 274

Query: 338 NMPTIAVKNVDGTIKAIREF-SYNDYYN 364
               + + + +G  + IR   SY D   
Sbjct: 275 PRTGVVMIDKNGETRLIRREDSYEDMVK 302


>gi|194378014|dbj|BAG63370.1| unnamed protein product [Homo sapiens]
          Length = 308

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 48/284 (16%), Positives = 88/284 (30%), Gaps = 38/284 (13%)

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF 172
               K+ LRI    S +   L+       R      ++ +    +V G+ FH        
Sbjct: 17  HPKAKLVLRIATDDSKAVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDP 76

Query: 173 LCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC------QRLKEFSE 223
             F   + +    F         +  + +GGG   ++      +           K F  
Sbjct: 77  ETFVQAISDARCVFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPS 136

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVL-------------------------DISENIKNL 258
              V+I  EPG   V +  TL   ++                          +++ +   
Sbjct: 137 DSGVRIIAEPGRYYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGS 196

Query: 259 VIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRI 318
                   AHV   L  +           Y++ + G +C   D   E      + +GD +
Sbjct: 197 FNCILYDHAHVKPLLQKRPKPD----EKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWM 252

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
            FE+   Y +   + FNG   PTI         + +++F   D+
Sbjct: 253 LFENKGAYTVAAASTFNGFQRPTIYYVMSGPAWQLMQQFQNPDF 296


>gi|156977279|ref|YP_001448185.1| diaminopimelate decarboxylase [Vibrio harveyi ATCC BAA-1116]
 gi|156528873|gb|ABU73958.1| hypothetical protein VIBHAR_06065 [Vibrio harveyi ATCC BAA-1116]
          Length = 418

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 47/383 (12%), Positives = 110/383 (28%), Gaps = 32/383 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTL-NQYMDGTTSSS 59
           KTP  +  +  +       +     +    ++   +K      +  TL N  + G    S
Sbjct: 19  KTPSIIYSEVIISEQCAAIVEPISQSPMEGRVFFPIKASYEPIVLKTLVNNSISGFEVMS 78

Query: 60  LYEVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            +E+        +        +   +C +  +    D ++ N+++   +  D  Q     
Sbjct: 79  YHELKHIRALFGYQYPLIFSGLCPDECTLRLLCFEQDILVINSLNDCFRVVDLLQSSTDG 138

Query: 118 IGLRINPSVSYSKFILAD-PNRPFSRLGEKC---------KDKIESEIKNVNGLMFHNNC 167
             + +   +S+         N   S+LG            +     E  N+ G+  H   
Sbjct: 139 SRITLLLRISFPCLNSEIGYNGRNSKLGIIAYSNEMYRCLELLERHEGINLEGIHCHQLI 198

Query: 168 ENKSFLCFSAMLKNIEKEFGHFI----TQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE 223
              S   +  M+  + K           ++    +GGG+             Q  +EF+E
Sbjct: 199 HESSASEYRKMIHQMAKLIDSIESSTSFKLAVCDIGGGLESMPNIKTRSVVKQICQEFNE 258

Query: 224 KYSVQ-IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
               + +  EPG A+V +     T V+      +            +      +      
Sbjct: 259 ILPDRSLIFEPGRALVNSGGICVTKVIGQRVRTQTHHCTVDVGSNLLVPTSSKRYHIIHE 318

Query: 283 PN----------TGPYTAMVCGRSCLAGDIFGEFHF-EKPVKIGDRISFEDVAGYNINRK 331
                       +         R     +   +      P ++G  +   +   Y    +
Sbjct: 319 DIINSEASLKEASCAVKVTFSDRVLSPANTIEDNVMMLSPPQVGSLLLIGNAGAYTSALE 378

Query: 332 NWFNGINMPTIAVKNVDGTIKAI 354
           + +    + +    +  G I+ +
Sbjct: 379 HQWL-QPLHSTYFLSSSGDIETL 400


>gi|115741783|ref|XP_793679.2| PREDICTED: similar to ornithine decarboxylase, partial
           [Strongylocentrotus purpuratus]
          Length = 288

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 39/296 (13%), Positives = 86/296 (29%), Gaps = 18/296 (6%)

Query: 36  LKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD 94
           +KC A   + +TL     G   +S  E+    +     +   Y    K            
Sbjct: 1   VKCNADRRVVETLANLGAGFDCASKTELRQVLDMGVHPDRIIYANPCKAISHLRFAKKNG 60

Query: 95  TIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE 154
             +    ++    K K      ++ LRI      +   L+           +  +  ++ 
Sbjct: 61  VRLMTFDNEEEIIKIKQVFPTARLVLRIWAEDKTAVIPLSVKFGCPLHEVRRLLEAAKNL 120

Query: 155 IKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPV 211
              V G+ FH    + +   + A +++    +         +  I +GGG    +     
Sbjct: 121 DLAVEGICFHVGSGSGNPESYYAAIRDARTAYDIGNDIGHDLRIIDIGGGFPGKESSSIP 180

Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPD 271
            +   ++     +Y     L   E            + DIS   +    + ++V + + D
Sbjct: 181 FEKVYQMSIVPNEYPGSGLLTMYE--------NWNDIKDISATPEVAYYISNNVYSTLGD 232

Query: 272 YLLYQESATIYPNT------GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321
             L                     +++ G +    D          ++ GD + F 
Sbjct: 233 SFLIGAKFDAKVLKSSNNDGSERPSVLWGNTTSRVDCVRRHCLLPELEEGDWLVFR 288


>gi|227357986|ref|ZP_03842328.1| decarboxylase [Proteus mirabilis ATCC 29906]
 gi|227161721|gb|EEI46753.1| decarboxylase [Proteus mirabilis ATCC 29906]
          Length = 467

 Score = 99.1 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 57/401 (14%), Positives = 121/401 (30%), Gaps = 65/401 (16%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P  ++    +  N++  + + K  G++  L   +K   +  +         G   SSL
Sbjct: 50  GSPLNIVWPHTVEQNVNAMVEVAKTFGIQTNLYYGVKVNKSQSLLQAAVAAGTGADVSSL 109

Query: 61  YEV-MLGHEKFGG-ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           YE+         G E  A   A     + A++     I+ +++ ++++    A +     
Sbjct: 110 YELNDAIRAGCKGTELCATGPAKTTAFLQALIVQGARIVIDSIEEMDELIHLATRWISPS 169

Query: 119 G-LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
           G + I          ++      + +    +    S+   V+G  FH +  +      + 
Sbjct: 170 GRISILLRFRPESNHISRFGMSSAEIMTALEKLNYSDQVKVDGFHFHLSGYSSVSRIKAF 229

Query: 178 MLKNIEKEFGHF-ITQIEWISLGGGIHFTD-------------------------KDYPV 211
                   +          I +GGG+                               YP 
Sbjct: 230 FDTLPLISYARALGYSPYIIDIGGGLPVQYVDSHCYKKWLSTQTHKDYRTRRIPDSFYPY 289

Query: 212 KDFCQR-----------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254
                                  + +   +  + + LEPG ++V  +      V  +   
Sbjct: 290 GGEINAQGWLTEFLTGVDPTGKRVCDALIEEGLTLCLEPGRSLVNQSAISVFRVCRVRPY 349

Query: 255 IKNLVIVDSSVE------------AHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDI 302
                ++                        +Y+ +     + G   A + G SCL  D+
Sbjct: 350 DHVGHVIFVEGTSFSACETWFNSEFLSDPLHIYRNNHQPLSSAGN--AWIAGHSCLDDDV 407

Query: 303 FGEF--HFEKPVKIGDRISFEDVAGYNIN-RKNWFNGINMP 340
                  F    K GD + F + AGY ++  +N F+   +P
Sbjct: 408 ITNRLIAFAHLPKPGDLLIFANTAGYQMDLLENQFHRHPLP 448


>gi|197284143|ref|YP_002150015.1| decarboxylase [Proteus mirabilis HI4320]
 gi|194681630|emb|CAR40664.1| putative decarboxylase [Proteus mirabilis HI4320]
          Length = 467

 Score = 99.1 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 57/401 (14%), Positives = 121/401 (30%), Gaps = 65/401 (16%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P  ++    +  N++  + + K  G++  L   +K   +  +         G   SSL
Sbjct: 50  GSPLNIVWPHTVEQNVNAMVEVAKTFGIQTNLYYGVKVNKSQSLLQAAVAAGTGADVSSL 109

Query: 61  YEV-MLGHEKFGG-ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           YE+         G E  A   A     + A++     I+ +++ ++++    A +     
Sbjct: 110 YELNDAIRAGCKGTELCATGPAKTTAFLQALIVQGARIVIDSIEEMDELIHLATRWISPS 169

Query: 119 G-LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
           G + I          ++      + +    +    S+   V+G  FH +  +      + 
Sbjct: 170 GRISILLRFRPESNHISRFGMLSAEIMTALEKLNYSDQVKVDGFHFHLSGYSSVSRIKAF 229

Query: 178 MLKNIEKEFGHF-ITQIEWISLGGGIHFTD-------------------------KDYPV 211
                   +          I +GGG+                               YP 
Sbjct: 230 FDTLPLISYARALGYSPYIIDIGGGLPVQYVDSHCYKKWLSTQTHKDYRTRRIPDSFYPY 289

Query: 212 KDFCQR-----------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254
                                  + +   +  + + LEPG ++V  +      V  +   
Sbjct: 290 GGEINAQGWLTEFLTGVDPTGKRVCDALIEEGLTLCLEPGRSLVNQSAISVFRVCRVRPY 349

Query: 255 IKNLVIVDSSVE------------AHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDI 302
                ++                        +Y+ +     + G   A + G SCL  D+
Sbjct: 350 DHVGHVIFVEGTSFSACETWFNSEFLSDPLHIYRNNHQPLSSAGN--AWIAGHSCLDDDV 407

Query: 303 FGEF--HFEKPVKIGDRISFEDVAGYNIN-RKNWFNGINMP 340
                  F    K GD + F + AGY ++  +N F+   +P
Sbjct: 408 ITNRLIAFAHLPKPGDLLIFANTAGYQMDLLENQFHRHPLP 448


>gi|183597146|ref|ZP_02958639.1| hypothetical protein PROSTU_00386 [Providencia stuartii ATCC 25827]
 gi|188023457|gb|EDU61497.1| hypothetical protein PROSTU_00386 [Providencia stuartii ATCC 25827]
          Length = 467

 Score = 98.7 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 52/397 (13%), Positives = 118/397 (29%), Gaps = 61/397 (15%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P  +I    +  N+     + +  GV   ++  +K   +  +     +   G   SSL
Sbjct: 53  GSPLNVIFPHTMQQNILKLNAVFQEHGVTGCIMYGVKVNQSNILVKIAVEEGIGVDVSSL 112

Query: 61  YEVMLGHE-KFGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           +E    ++     E       A  +  +  ++ +   II +++ +L    +         
Sbjct: 113 HEWQDAYDYGISPEKICATGPAKTNEFLWKLILHNSLIIVDSLEELQDILNLLSGTSFIA 172

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
            +        S+      +  F    +  K       + +                F  +
Sbjct: 173 RVLFRYQPQMSRSRFGMKSAAFITALQLAKQHAGLLWQGI-HFHLGGYKSASRVQAFREL 231

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTD-------------------------KDYPV-- 211
              I+        +I+ I +GGG+                               YP   
Sbjct: 232 QPLIKSALS-LGFEIKTIDIGGGLPVQYVSTRQYQSWIDNQTSQYYQNNRIPTDFYPYGG 290

Query: 212 ---------------KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                              + + ++ +K  + + +EPG  +V  +      V+ +++  +
Sbjct: 291 EQSATQWLTTFLSSQYTENETISQYLKKNHITLTIEPGRCLVDQSAISLFRVVRVNQQFQ 350

Query: 257 NLVIVDSS----------VEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEF 306
           + +I                  + D L      +      P    + G SCL  D+    
Sbjct: 351 HPIIFVEGSSFSACETWFNSEFLLDPLHVLVPHSKQHKQRPTRVWIAGHSCLENDVITHR 410

Query: 307 HFE--KPVKIGDRISFEDVAGYNIN-RKNWFNGINMP 340
                   + GD + F + AGY ++  +N F+   +P
Sbjct: 411 LILFTHLPQAGDLLIFINTAGYQMDLLENQFHRHPIP 447


>gi|171742109|ref|ZP_02917916.1| hypothetical protein BIFDEN_01215 [Bifidobacterium dentium ATCC
           27678]
 gi|283456768|ref|YP_003361332.1| diaminopimelate decarboxylase [Bifidobacterium dentium Bd1]
 gi|171277723|gb|EDT45384.1| hypothetical protein BIFDEN_01215 [Bifidobacterium dentium ATCC
           27678]
 gi|283103402|gb|ADB10508.1| diaminopimelate decarboxylase [Bifidobacterium dentium Bd1]
          Length = 524

 Score = 98.7 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/266 (13%), Positives = 66/266 (24%), Gaps = 35/266 (13%)

Query: 134 ADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHF 189
                    L      +   ++  + G+  H          F      M+   +  +   
Sbjct: 254 MTMVADGPALAVLKDIQRHQDVLELVGVHSHIGSNIHDADAFIQAAKRMMLLRKTFYATD 313

Query: 190 ITQIEWISLGGGIHFTDKDYPVKDFCQR-----------LKEFSEKYSVQIYLEPGEAIV 238
              +  + LGGG      D                    +       +  I  EPG   V
Sbjct: 314 AYTLPEVDLGGGYSVAYTDGEDSMDIDVELGRLADAVTTVNRALGMPAPVISFEPGRWTV 373

Query: 239 TNTTTLNTTVLDISE---------------NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             T      V  +                 + +  V VD  +  ++   L   +      
Sbjct: 374 APTGVTLYRVGTVKPVRLNGDATDKAGNPVHERVYVSVDGGMSDNIRPALYGSDYTARLA 433

Query: 284 NTG----PYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGIN 338
           N           V G  C +GDI          +  GD ++      Y     + +N   
Sbjct: 434 NRKGSDDTKLCRVVGMHCESGDIVVNEVRLPADITRGDILAVPVTGAYGRTMASNYNQAL 493

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364
           +P +           IR  S +D  +
Sbjct: 494 IPAVVGIGETDAHVMIRRQSIDDLLS 519



 Score = 76.7 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 20/154 (12%), Positives = 48/154 (31%), Gaps = 9/154 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTAL----YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
            +P Y+ID  ++       +        N    +  A K   +  +   + +      + 
Sbjct: 34  GSPLYVIDTDEVRARASKFVTSAGNAFNNTVTHVSFAGKALLSKEICRIVTEAGMLIDTC 93

Query: 59  SLYEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           ++ E+ +       G     +   K  E    A+      I+ +  ++  +  D A++L 
Sbjct: 94  TMGEMRIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKIVVDEPNEPARIADIAKRLG 153

Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKC 147
           K+    LR+   +               + G   
Sbjct: 154 KRARVMLRVTSGIHAGGHEFVSTAHEDQKFGVAL 187


>gi|156317064|ref|XP_001618032.1| hypothetical protein NEMVEDRAFT_v1g8610 [Nematostella vectensis]
 gi|156197064|gb|EDO25932.1| predicted protein [Nematostella vectensis]
          Length = 184

 Score = 98.7 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 56/184 (30%), Gaps = 15/184 (8%)

Query: 34  LALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG-HEKFGGETHAYNVAYKDCE--IDAVL 90
            A+K  +   + + L++   G    S+ E+          E   ++   K       A+ 
Sbjct: 1   YAVKANSNLAVLNVLSRLGAGFDIVSVGELERVLRAGAKPERIVFSGVGKQPAEIRRALE 60

Query: 91  SNCDTIIFNTVSQLNKFKDKA--QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCK 148
                    + ++L +    A       +I  R+NP V              ++ G    
Sbjct: 61  VGILCFNVESEAELERVNQVAGECGKTAEISFRVNPDVDAGTHPYISTGLKENKFGIAIA 120

Query: 149 DKIESEIK-------NVNGLMFHNNCENKSFLCFSAMLKN---IEKEFGHFITQIEWISL 198
           +              +V G+  H   +      F   L+    +  E       I+ + L
Sbjct: 121 EAKRIYQHAASLPHIHVVGMDCHIGSQLTELAPFMDALERLLGLIDELAEVGITIKHLDL 180

Query: 199 GGGI 202
           GGG+
Sbjct: 181 GGGL 184


>gi|288541506|gb|ADC45578.1| lysine/ornithine decarboxylase [Streptomyces nanchangensis]
          Length = 396

 Score = 98.3 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 52/369 (14%), Positives = 109/369 (29%), Gaps = 40/369 (10%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG- 66
           + D   +    ++   +R+  GV +  A+K      +   L     G  ++S+ E+    
Sbjct: 14  VFDLTGIEERYESL--LRELPGVAVRFAMKACPVDEVLARLAGAGAGVDAASVPEMEQAL 71

Query: 67  HEKFG-GETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                 G  H  N    D  I             +++  +    + A        L  + 
Sbjct: 72  RAGVPIGRVHYGNTVKSDRNIADAHRLGIRDFATDSLEDVAAIAEHAPGARVFCRLTTDT 131

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             +  +          +       +         +GL  H   +  +   +    + +  
Sbjct: 132 RGALWELSGKY--GCSTADAVTILETARKLGLVPSGLSVHVGSQQMAPEAWRDAFERLAD 189

Query: 185 EFG---HFITQIEWISLGGGI--------HFTDKDYPVKDFCQRLKEFSEK------YSV 227
                 H    ++ I+LGGG+        H    D P+      ++E          + +
Sbjct: 190 VLAALDHHGIALDHINLGGGLPVPGYLDKHGRPLDPPIDKLFAVIREGMAHLRTIGGHHL 249

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDI------SENIKNLVIVDSSVEAHVPDYLLYQESATI 281
              +EPG  +V     +   V  +          +  + +       + +    Q     
Sbjct: 250 AFVVEPGRYLVAGQGAIRAHVSRLSARRGPDGRRQYWLYLSCGKFNGLYEMDELQYPLVF 309

Query: 282 YPNTGP----YTAMVCGRSCLAGDIF----GEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
             + GP      A+V G +C + D +    G     + +  GD +       Y I+    
Sbjct: 310 PTHGGPGTRHVPAVVAGPTCDSDDAYSHQDGLVQVPEALASGDPVWVLSCGAYAISYTTQ 369

Query: 334 -FNGI-NMP 340
            FNG   +P
Sbjct: 370 GFNGFGPLP 378


>gi|15900104|ref|NP_344708.1| pyridoxal-dependent decarboxylase [Streptococcus pneumoniae TIGR4]
 gi|149013610|ref|ZP_01834181.1| pyridoxal-dependent decarboxylase, Orn/Lys/Arg family protein
           [Streptococcus pneumoniae SP19-BS75]
 gi|14971633|gb|AAK74348.1| pyridoxal-dependent decarboxylase, Orn/Lys/Arg family
           [Streptococcus pneumoniae TIGR4]
 gi|147762801|gb|EDK69756.1| pyridoxal-dependent decarboxylase, Orn/Lys/Arg family protein
           [Streptococcus pneumoniae SP19-BS75]
 gi|301793450|emb|CBW35823.1| Pyridoxal dependent decarboxylase [Streptococcus pneumoniae INV104]
          Length = 368

 Score = 98.3 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 50/354 (14%), Positives = 112/354 (31%), Gaps = 21/354 (5%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +P  + D   L   LD            +L  A+K  +   + + L   +DG   +SL E
Sbjct: 24  SPCVVYDFGLLETVLDEFKNQIPVTFNYQLFYAVKANSNEKILEFLVDKIDGVDVASLSE 83

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
           + +  + F       +V       + + +         ++ L   +       + +G+R+
Sbjct: 84  LDVAKKFFPPTQI--SVNGPAFSYETLYNLIKKQYKVDINFLEHLQQ--FSPKESVGIRV 139

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
                 +                   +    +   +  L FH   ++  F+     +   
Sbjct: 140 TEPDELN--NRMSRFGINICSDNWTSNL---QNPLITRLHFHFGEKDDKFIVKLDKILFK 194

Query: 183 EKEFGHFITQIEWISLGGGIHF----TDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
            +E    + ++  I+LGGG                  +  K++    +V   +EPG AI 
Sbjct: 195 LQEINK-LREVREINLGGGFMKLFMENRLKEFFLSLMEIYKKYDIDSTVTTIIEPGSAIT 253

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA--MVCGRS 296
           + +  + T+ +++SE  +  VI   +               T   ++       ++ G +
Sbjct: 254 SFSAYMITSPVNVSEVNEQQVITLDTSIYT-NTLWFVPHIITTLNSSSKERYSTILYGNT 312

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF--NGINMPTIAVKNVD 348
           C   D +        +     I F  V  Y  +  +    N      + +   +
Sbjct: 313 CYEHDKYKMKVSLPRLTQNSSIVFFPVGAYIKSNHSNLHRNDFMR-EVYLWTKN 365


>gi|191012|gb|AAA36963.1| ornithine decarboxylase [Cricetus cricetus]
          Length = 293

 Score = 98.3 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 73/242 (30%), Gaps = 35/242 (14%)

Query: 137 NRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQI 193
                R      ++ +    +V G+ FH          F   L +    F         +
Sbjct: 5   FGATLRTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQALSDARCVFDMGTEVGFSM 64

Query: 194 EWISLGGGIHFTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTT 247
             + +GGG   ++      +           K F     V++  EPG   V +  TL   
Sbjct: 65  YLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPPDSGVRVIAEPGRYYVASAFTLAVN 124

Query: 248 VL----------------------DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285
           ++                       +++ +           AHV   L  +         
Sbjct: 125 IIAKKIVSKGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHAHVKPLLPKRPKPD----E 180

Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
             Y++ + G +C   D   E      + +GD + FE++  Y +   + FNG   P+I   
Sbjct: 181 KYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTFNGFQRPSIYYV 240

Query: 346 NV 347
             
Sbjct: 241 MS 242


>gi|320167076|gb|EFW43975.1| ornithine decarboxylase 1 [Capsaspora owczarzaki ATCC 30864]
          Length = 476

 Score = 98.3 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 83/258 (32%), Gaps = 14/258 (5%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y+ID  ++    D   ++     V    A+KC     +   L +   G   +S  E+ 
Sbjct: 48  PFYIIDVGQVARKYD--QWVAALPRVDPFYAVKCNGDKTILKLLAKLGTGFDCASKAEMD 105

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
              +     +   Y    K        S  +  +    ++    K K    + ++ LR+ 
Sbjct: 106 TVLKMGVPADRIIYAHPCKMASHVKFASQNNVRMMTFDNEHELHKMKELYPNARLVLRVL 165

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S S   L                  +    +V G+ +H          F+  +   +
Sbjct: 166 TDNSRSICNLGLKFGAALARVPHMLQLAKDLELDVVGVSYHVGSGCFDAQAFADAVAVAK 225

Query: 184 KEF---GHFITQIEWISLGGGIHFTDK-DYPVKDFCQRLKEFSEKYSV-------QIYLE 232
             F        +   + LGGG   +D  +    D    L+   +K+          I  E
Sbjct: 226 TVFNIGAELGFKFNLLDLGGGFPGSDNVNVKFDDIASVLRVALDKHFPAAENKDLHIIAE 285

Query: 233 PGEAIVTNTTTLNTTVLD 250
           PG   V+ + TL  +V+ 
Sbjct: 286 PGRYFVSASHTLAVSVVA 303



 Score = 88.7 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 28/70 (40%)

Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344
              +   + G +C + D   +      + IGD + FED+  Y +   + FNG   P +  
Sbjct: 407 ESGFACSIWGPTCDSMDCITKTGRLPELAIGDWLYFEDMGAYTVAASSTFNGFPKPKLMY 466

Query: 345 KNVDGTIKAI 354
            N +     +
Sbjct: 467 VNSESHRNLL 476


>gi|213418015|ref|ZP_03351093.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 110

 Score = 98.3 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 26/84 (30%), Gaps = 7/84 (8%)

Query: 288 YTAMVCGRSCLAGDIF-------GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              +V G  C +GD+F        E      V  GD +   D   Y  +  + +N   + 
Sbjct: 23  VETVVAGPLCESGDVFTQQEGGMVETRALPAVIPGDYLVLHDTGAYGASMSSNYNSRPLL 82

Query: 341 TIAVKNVDGTIKAIREFSYNDYYN 364
              + +        R  +  +   
Sbjct: 83  PEVLFDNGQARLIRRRQTIEELLA 106


>gi|196018902|ref|XP_002118886.1| hypothetical protein TRIADDRAFT_62879 [Trichoplax adhaerens]
 gi|190577850|gb|EDV18628.1| hypothetical protein TRIADDRAFT_62879 [Trichoplax adhaerens]
          Length = 641

 Score = 98.3 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 84/235 (35%), Gaps = 13/235 (5%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSSLYE 62
           TP ++ DK  L   +        N    L  ALK      +  +L     DG  + S +E
Sbjct: 389 TPVFITDKSILNKKVKNIRKAFDN-NCLLYYALKANFNPKIIRSLKDAGIDGVETISPFE 447

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH-KKIGL 120
           + L  +  F      +     D       +  +  +   +  +++ +  A+K +  ++ +
Sbjct: 448 IDLAKKCGFKSNQILFTGNNCDNYELDYANKQN--VVVNIGSISELQYYAEKHNGSEVSI 505

Query: 121 RINPSVSYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFHNNCENKSFLC 174
           RINP     +F         S+ G      E+  + I+     + GL  H      +   
Sbjct: 506 RINPGFGDGEFKQIITGGEDSKFGIYHSQMEEALNIIKFYNLKLIGLHCHLGSGLYNTKN 565

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
           F+ M+  +  + G+ I  + +I LGGG     K    +          +KY  + 
Sbjct: 566 FAPMVDFM-FKLGNQIENLRFIDLGGGFGVRYKPSDEEVDLSEFALVVDKYYKKY 619


>gi|213420478|ref|ZP_03353544.1| putative diaminopimelate decarboxylase [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
          Length = 275

 Score = 98.3 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 78/224 (34%), Gaps = 16/224 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+Y+  + +++ N+             K   A K  +  G+   +        ++S Y
Sbjct: 45  PTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQY 104

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHK-- 116
           EV    E  F G+   +N   K           D   I  +++ +L      ++KL K  
Sbjct: 105 EVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVA 164

Query: 117 KIGLRINPSVSYSKF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170
            + +R+ P+V  +          A       +  E C+  +     ++ GL  H   +  
Sbjct: 165 NVCVRVEPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMHVGDQVP 224

Query: 171 SFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYP 210
               F+   K +  E          + + I++GGGI    K   
Sbjct: 225 ESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDD 268


>gi|147900989|ref|NP_001087584.1| antizyme inhibitor 1 [Xenopus laevis]
 gi|51512991|gb|AAH80385.1| MGC81852 protein [Xenopus laevis]
          Length = 443

 Score = 97.9 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 49/347 (14%), Positives = 104/347 (29%), Gaps = 30/347 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  K++        I     +K    ++C ++  + + L     G   ++  E+ L
Sbjct: 40  FFVADLGKIVKKHFKWKNIMG--HIKPFYTVRCNSSPAVLEILAALGMGFACANKNEMSL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
            ++     E   Y    K        +     +    S+    K     L+ K+ L I  
Sbjct: 98  VYDLGISMENVVYTNPCKQASQIKHAAKIGVNLMTCESETELKKIVRNHLNAKLLLHIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
                +  +        +      D  +     V G+ FH +  + +   +   L +   
Sbjct: 158 EGISGEEEMNMTFGTTLKNCRHLLDCAKELSVEVVGVKFHVSSSSNNPQTYIHALSDARC 217

Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIVT 239
            F        ++  + +GG      +   V      L    F E    +I  EPG   V+
Sbjct: 218 VFDMAKELGFKMNILDIGGISENEAQLEEVYQAVSPLLDVYFPEGSGTRIIAEPGSFYVS 277

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE---------------------- 277
           +  TL   V+       +  +  +          +Y                        
Sbjct: 278 SAFTLAVNVIAKEATEHDQHLSSAGKPNSNKPAFIYCMKEGVYGSFARKLSEKLNTAPEV 337

Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
                 N   + + + G S    D+  E      +++GD I F+++ 
Sbjct: 338 HKKYKDNEPLFASSLLGPSYDELDVIVEHCLLPELEVGDWIVFDNMG 384


>gi|311739239|ref|ZP_07713076.1| diaminopimelate decarboxylase [Corynebacterium pseudogenitalium
           ATCC 33035]
 gi|311305665|gb|EFQ81731.1| diaminopimelate decarboxylase [Corynebacterium pseudogenitalium
           ATCC 33035]
          Length = 462

 Score = 97.9 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 54/420 (12%), Positives = 123/420 (29%), Gaps = 78/420 (18%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P  +++   L +N    L    + GV  ++  A K   A    D       G   +S 
Sbjct: 43  GSPVNVLNSAPLRHNAQELLDAGASHGVATQVFFARKANKALCFVDAARDAGLGVDVASE 102

Query: 61  YEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E+    +     E    + A   D  +   +S   TI  ++ ++  +    AQ L    
Sbjct: 103 NELRQVLDRGVAPERIILSAAIKTDGLLRLAVSRGVTISCDSRAESRRIAAIAQALDTTA 162

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
            +    +          P R   RL    +     +   V G+  H +  +++    +  
Sbjct: 163 HVAPRLAPDPDSLP---PTRFGERLP-AWRQAEWPQELRVVGVHVHLHGYSEADRRTALA 218

Query: 179 LK-NIEKEFGHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEF-------------- 221
               + +         ++I +GGG+  +        + + +R+                 
Sbjct: 219 EAIALIEHVRALGQPADFIDIGGGVPMSYLESREQWEYYLERIASQRTGTGKPFTWKADP 278

Query: 222 ----------------------------------SEKYSVQIYLEPGEAIVTNTTTLNTT 247
                                               +  + ++LEPG +++     +   
Sbjct: 279 LSNTYPFWQEPTRGQWLDQLLSGEVPGYGTAGTALRERDIALHLEPGRSLLDGCGVILAE 338

Query: 248 VLD----------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSC 297
           V            I   +       ++ +  +   L+         +  P T  V G  C
Sbjct: 339 VSFLKERSDGLPLIGVAMNRTQCRTAADDILLDPLLVPTAGPAKEISREPRTGFVVGAYC 398

Query: 298 LAGDIFGEFH--FEKPVKIGDRISFEDVAGYNI----NRKNWFNGINMPTIAVKNVDGTI 351
           +  ++       F   + +GD ++  + AGY +    +  +    I +      + D  +
Sbjct: 399 IEDEVILRRELDFPDGIAVGDTLAIPNTAGYFMHILESASHQ---IPLARNVFYDGDDWV 455


>gi|297154183|gb|ADI03895.1| lysine/ornithine decarboxylase [Streptomyces bingchenggensis BCW-1]
          Length = 396

 Score = 97.9 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 51/369 (13%), Positives = 108/369 (29%), Gaps = 40/369 (10%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG- 66
           + D   +    ++   +R+  GV +  A+K      +   L     G  ++S+ E+    
Sbjct: 14  VFDLTGIEERYESL--LRELPGVAVRFAMKACPVDEVLARLAGAGAGVDAASVPEMEQAL 71

Query: 67  HEKFG-GETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                 G  H  N    D  I             +++  +    + A        L  + 
Sbjct: 72  RAGVPIGRVHYGNTVKSDRNIADAHRLGIRDFATDSLEDVAAIAEHAPGARVFCRLSTDT 131

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             +  +          +       +         +GL  H   +  +   +    + +  
Sbjct: 132 RGALWELSGKY--GCSTADAVTILETARKLGLVPSGLSVHVGSQQMTPEAWRDAFERLAD 189

Query: 185 EFG---HFITQIEWISLGGGI--------HFTDKDYPVKDFCQRLKEFSEK------YSV 227
                      ++ I+LGGG+        H    D P+      ++E          + +
Sbjct: 190 VLAALDRRGIALDHINLGGGLPVPGYLDKHGRPLDPPIDKLFAVIREGMAHLRTIGGHHL 249

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENI------KNLVIVDSSVEAHVPDYLLYQESATI 281
              +EPG  +V     +   V  +S         +  + +       + +    Q     
Sbjct: 250 GFVVEPGRYLVAGQGAIRAHVSRLSARQGPDGRRQYWLYLSCGKFNGLYEMDELQYPLVF 309

Query: 282 YPNTGP----YTAMVCGRSCLAGDIFGEF----HFEKPVKIGDRISFEDVAGYNINRKNW 333
             + GP      A+V G +C + D +          + +  GD +       Y I+    
Sbjct: 310 PTHGGPGTRHVPAVVAGPTCDSDDAYSHEDGLVQVPEALASGDPVWVLSCGAYAISYTTQ 369

Query: 334 -FNGI-NMP 340
            FNG   +P
Sbjct: 370 GFNGFGPLP 378


>gi|330821058|ref|YP_004349920.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia gladioli BSR3]
 gi|327373053|gb|AEA64408.1| Orn/DAP/Arg decarboxylase 2 [Burkholderia gladioli BSR3]
          Length = 398

 Score = 97.5 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 51/382 (13%), Positives = 96/382 (25%), Gaps = 38/382 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSSL 60
           ++TP Y+ D Q  L             G +L+++LK      +         DG   +S 
Sbjct: 19  LRTPCYVYDPQVALARYRALK---ARLGTRLVVSLKANPDPALLARCASGFEDGVELASR 75

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA------QKL 114
            E+ L         +  N +  +  + A L+    I+ + +    +F   A       + 
Sbjct: 76  GELALVETCTELPRYLNNPSMDEDFMRAGLAARCRIVLDNLDAARRFVPLALESAAHGRP 135

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN---------VNGLMFHN 165
            + I LR+N      +      +  F     +    + +               G     
Sbjct: 136 PEAILLRLNAGALAGEQARPHWHDHFGMTPNEAAAAVRALAAAGFAAAGLHVFAGPHSFA 195

Query: 166 NCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK--EFSE 223
             +                           ++L G      +    +      +      
Sbjct: 196 RQDASPADLRILPEALAALARDLAPLNGAPLTLLGLGGGFAETLAPEAMFDGYRAALAPL 255

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH-----------VPDY 272
             +  +  E G AI  +     T V+ +     + + V     +H               
Sbjct: 256 AAAHTLTHEAGRAIFADAGWFVTRVVAVKHWADSSIAVCDGGLSHSFLLAQTELVMRRLA 315

Query: 273 LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEF--HFEKPVKIGDRISFEDVAGY--NI 328
                  T          +  G +C   D+ G        P   GD   F     Y    
Sbjct: 316 SPILVRRTPAGVARAVPTLFVGSTCSRADVIGRDERRDAPPPHTGDLAVFPRCGAYHRTY 375

Query: 329 NRKNWFNGINMPTIAVKNVDGT 350
           +    F     P        GT
Sbjct: 376 SM-THFLSHQ-PAHVEIRPTGT 395


>gi|254481038|ref|ZP_05094284.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein
           [marine gamma proteobacterium HTCC2148]
 gi|214038833|gb|EEB79494.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein
           [marine gamma proteobacterium HTCC2148]
          Length = 408

 Score = 97.5 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 64/364 (17%), Positives = 119/364 (32%), Gaps = 15/364 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP  + D   +   +        N  +  LLA+K      +  T  Q++ G   S+L 
Sbjct: 44  LSTPALVFDLDTITARMQALAQTAANQNIACLLAVKSCPREPLLKTAQQHLAGFDVSNLA 103

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E         G+T +        +     +  + ++    S         Q       LR
Sbjct: 104 EYRALPADLSGKTVSLTSPQLTKDYYLFAARGNRLVVTVDSIAQCVNYLQQGAPFPYVLR 163

Query: 122 INPSV----SYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
           I        S + +         + + E+   + + + +   G   H+  E  S   +  
Sbjct: 164 IQGGQLLPTSDAAYTNCSRFGFTAPMLEQLLQRPDVQAQPPCGWHVHHGSEINSAATYQF 223

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI 237
           ++  + K           I+LGGG H  +K      F    K F E     +++EPG+  
Sbjct: 224 LMAGLAKLGAQLPEPPAIINLGGGWHSVEKQQLNDLFALARKVFPEPC--SVFIEPGQWF 281

Query: 238 VTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRS 296
                     V++ S +  NL  V + S++ H+             P        + G S
Sbjct: 282 GKGAGLAVGEVVNKSGDDDNLGCVLNLSMDCHLRWSSPRLLVPVQLPALKFAKVYLGGAS 341

Query: 297 CLAGDIFGEFHFE--------KPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348
           C   D  G F             + +G R+   +++ Y++     FNGI   T       
Sbjct: 342 CYEADSLGCFMLPYRQDLAHDTSLGLGCRVLLSNISLYSLAWNQGFNGIAPATEYWLRNG 401

Query: 349 GTIK 352
             ++
Sbjct: 402 LALE 405


>gi|168822845|ref|ZP_02834845.1| MccE [Salmonella enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|205340846|gb|EDZ27610.1| MccE [Salmonella enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|320089196|emb|CBY98949.1| ribosomal-protein-serine acetyltransferase [Salmonella enterica
           subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
          Length = 588

 Score = 97.5 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 43/363 (11%), Positives = 104/363 (28%), Gaps = 24/363 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           P+++ D    L          K       + +++K  +       + +        S  E
Sbjct: 27  PFFIFDADSALERARHLTAACKEYFPDAVIAVSVKSCSLGIFLRLIAEEGLSAEVCSADE 86

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKIGL 120
             L     F G+    +  YK+ E  ++  +    +  ++  +L++        ++KIG+
Sbjct: 87  FKLALKAGFTGDRIILDGPYKNSEDLSLALDKGALVHIDSAHELSEIIGLMSGYNQKIGV 146

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-NVNGLMFHNNCENKSFLCFSAML 179
            +  S  YS    +          ++    + S    ++ G   H     ++    S  L
Sbjct: 147 GVRLSHIYSDTQRSRFGVTAEEFRDEIVPLLTSCPDISLRGFHLHTGSNLENPSKVSDCL 206

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEKY---------S 226
           ++        + +   + +G G            P  +     ++               
Sbjct: 207 RDWLPFLVENMPEGGHLDMGSGFPADSFSPVAAVPTVEPAAFFRDIVSVLSEYDPALIQK 266

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESA----TIY 282
            ++  EPG  +  +        + +     + VI  +     +P    +  S        
Sbjct: 267 WKLIFEPGRTLSEDHGYAIGKTVSVKNRYDSEVIQTNLGINWIPSVHNWHHSLLPLGHNE 326

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
                 T ++ G +C   D          +K            Y++   N +     P +
Sbjct: 327 HIPDDTTQILAGFNCFENDCLFPRGPL-NLKKNQLFIIRGCGAYDLQTANEW-TRTRPPV 384

Query: 343 AVK 345
              
Sbjct: 385 YAL 387


>gi|328858639|gb|EGG07751.1| hypothetical protein MELLADRAFT_71643 [Melampsora larici-populina
           98AG31]
          Length = 562

 Score = 97.5 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 76/261 (29%), Gaps = 22/261 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +         +     VK   A+KC     + +   +   G   +S  E+  
Sbjct: 117 FYVCDLAVVYRLYLRWQKVMGRR-VKPFFAVKCNPDPHVINLFAKLGLGFDCASHAEIAQ 175

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                       Y    K             + + F+ + +L+K           I + I
Sbjct: 176 VLAFGVSPSNIIYANPCKAGSFIRHAHASGVEMMTFDNMDELHKVAKHHPSAKMVIRILI 235

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLCFS 176
           +   S          R   + G   ++             NV G+ FH      +   + 
Sbjct: 236 DDRGS--------LCRFGEKFGAPLENVHLLLGTARQLGVNVIGVAFHVGSGCTNPELYK 287

Query: 177 AMLKNIEKEFG---HFITQIEWISLGGGIHFTD-KDYPVKDFCQRLKEFSEKYSVQIYLE 232
             LK+ +  F        Q   + +GGG    + +           + F     V +  E
Sbjct: 288 DALKHAKWVFELASQHGYQFNLLDVGGGFGDDNLEFLAEGLLAGLDEYFPVGCGVNVIAE 347

Query: 233 PGEAIVTNTTTLNTTVLDISE 253
           PG   VT    L T V+   +
Sbjct: 348 PGRYFVTEAFELATNVIARRQ 368



 Score = 66.3 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 28/69 (40%), Gaps = 3/69 (4%)

Query: 288 YTAMVCGRSCLAGDIFGEFHFEKP--VKIGDRISFEDVAGYNINRKNWFNGINMPTI-AV 344
           +   + G SC + D+           +K+GD + +E +  Y +   + FNG  +  +   
Sbjct: 484 HACRIFGPSCDSIDLVCPRTLLPTEVLKVGDWLKWERMGAYTVCAASQFNGFKISQVQYT 543

Query: 345 KNVDGTIKA 353
            +  G  + 
Sbjct: 544 IDAKGDEEL 552


>gi|213582677|ref|ZP_03364503.1| putative amino acid decarboxylase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 351

 Score = 97.5 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 78/224 (34%), Gaps = 16/224 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+Y+  + +++ N+             K   A K  +  G+   +        ++S Y
Sbjct: 45  PTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQY 104

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHK-- 116
           EV    E  F G+   +N   K           D   I  +++ +L      ++KL K  
Sbjct: 105 EVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVA 164

Query: 117 KIGLRINPSVSYSKF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170
            + +R+ P+V  +          A       +  E C+  +     ++ GL  H   +  
Sbjct: 165 NVCVRVEPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMHVGDQVP 224

Query: 171 SFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYP 210
               F+   K +  E          + + I++GGGI    K   
Sbjct: 225 ESEPFAKATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDD 268


>gi|313246908|emb|CBY35760.1| unnamed protein product [Oikopleura dioica]
          Length = 301

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 53/293 (18%), Positives = 95/293 (32%), Gaps = 35/293 (11%)

Query: 102 SQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLG-------EKCKDKIESE 154
            +     D    +  KIG+R+NP+V   K  ++      S+ G       E    KI  E
Sbjct: 1   MRACLLPDLNVDVTGKIGMRVNPNVGAGKIAMSSTAGKSSKFGLPMTGEFEDEVVKIILE 60

Query: 155 IKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFI-----TQIEWISLGGGIHFTDKDY 209
              + GL  H   +  S    +  ++ +              QI++I +GGGI    +  
Sbjct: 61  NSWIQGLHQHIGSQGISLDQLTLGVERLVALARKINELAGTKQIKYIDVGGGIPTDYESD 120

Query: 210 P----VKDFCQRLKEFSEKYS-VQIYLEPGEAIVTNTTTLNTTVLDIS-ENIKNLVIVDS 263
                  ++ + + E          + E G ++VT      + V  +     +  V+   
Sbjct: 121 NEKVAYAEYAKLVNERVPNLDEFNFHSEFGRSLVTKYAISVSKVETVKTWGDRITVLTHF 180

Query: 264 SVEAHVPDYLL---YQESATIYPNTGPYTA------MVCGRSCLAGDIFGEFHFEKPVKI 314
                + +  L   +    ++    G           V G  C  GD   +      +K 
Sbjct: 181 GSNQFLREVYLPDTWFHRMSVLDQNGDPKVSDLIEQDVGGPLCFQGDYLAKARALPKIKP 240

Query: 315 GDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367
           GD I   D+ GY     + FN I  P +   +            Y  + +  S
Sbjct: 241 GDYIVMHDIGGYTYALYSRFNSIQAPAVYGYDASENF-------YE-FKSRES 285


>gi|21224367|ref|NP_630146.1| lysine/ornithine decarboxylase [Streptomyces coelicolor A3(2)]
 gi|3169049|emb|CAA19247.1| putative lysine/ornithine decarboxylase [Streptomyces coelicolor
           A3(2)]
          Length = 402

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 55/369 (14%), Positives = 118/369 (31%), Gaps = 42/369 (11%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG- 66
           + D   +    DT     +  GV +  A+K      +   L     G  ++S  EV    
Sbjct: 26  VYDLAGIERRHDTLRN--ELPGVHVRFAMKACPVDEVLAALAGRGAGADAASPGEVEQAL 83

Query: 67  HEKFG-GETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                 G  H  N    D  I             +++  +      A        +    
Sbjct: 84  RAGVPAGRVHYGNTVKSDRNIAEAHRLGVRTFATDSLQDVAALAVHAPGARVFCRVAT-- 141

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLK-- 180
               +  +    N+     G+  +  + +    +   GL  H   +  +   +   +   
Sbjct: 142 --GGAGALWGLSNKFGCPPGDAVRVLVAARDAGLVPAGLSVHVGSQQMTSEAWHGAVDDL 199

Query: 181 -NIEKEFGHFITQIEWISLGGGI--------HFTDKDYPVKDFCQRLKEFSEKY------ 225
            ++ +  G    +++ ++LGGG+        H    D P+      ++E  ++       
Sbjct: 200 GDVLRALGRHGIRVDHVNLGGGLPALGYRDRHGAPLDPPLDKIFAVIREGMDELRRIHGG 259

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISEN------IKNLVIVDSSVEAHVP--DYLLYQE 277
            +   +EPG  +V +   +   V+ ++E        ++ + +       +   D L Y+ 
Sbjct: 260 HLDFVVEPGRHLVADHGAIRAHVVRLTERRAADGERQHWLYLSCGKFNGLYEMDALQYRL 319

Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP----VKIGDRISFEDVAGYNINRKNW 333
               +P+     A+V G +C + D +       P    +  GD +       Y  +    
Sbjct: 320 VFPGHPDGPCVPAVVAGPTCDSDDAYSHEEGLVPVPAALASGDPVWVLSCGAYATSYTTR 379

Query: 334 -FNGI-NMP 340
            FNG   +P
Sbjct: 380 GFNGFAPLP 388


>gi|170049413|ref|XP_001855919.1| ornithine decarboxylase [Culex quinquefasciatus]
 gi|167871260|gb|EDS34643.1| ornithine decarboxylase [Culex quinquefasciatus]
          Length = 346

 Score = 96.4 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 48/298 (16%), Positives = 98/298 (32%), Gaps = 12/298 (4%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y++D   ++      +   K   V    A+KC  A  +  TL         +S  E+ 
Sbjct: 36  PFYVMDIGDIVRKHQNWIE--KMPRVVPHYAVKCNDAEVVCSTLAALGASFDCASKGEIS 93

Query: 65  LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                    E   +    K       A  +N  T+ F++ ++L+K +         + +R
Sbjct: 94  KILGLGVAPERIIFANPMKPSSHLRYANANNVKTMTFDSDTELHKIRKLCPDAKLVLRIR 153

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF---SAM 178
                +           P        K  + S   ++ G+ FH       F  +    + 
Sbjct: 154 CEAEKAQCPLGKKFGCDPVEEAPRLIK-IVRSLDMDLVGISFHVGSGCADFPVYYKAISY 212

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
            +++         ++  + +GGG         D         L +F    SV++  EPG 
Sbjct: 213 ARDLFDYAATLGYELNLLDIGGGFPGDVGTSIDEVAMIVNSALDKFFPDKSVRVISEPGR 272

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVC 293
             V +  TL T V      +         +  ++ D +    ++ +Y +  P   ++ 
Sbjct: 273 YYVASAFTLITCVQSKRVCLNAKTGTIDRMMYYLNDGVYASFNSILYDHQHPQPKLIG 330


>gi|154707006|ref|YP_001424392.1| non-ribosomal peptide synthetase module-containing protein
           [Coxiella burnetii Dugway 5J108-111]
 gi|154356292|gb|ABS77754.1| non-ribosomal peptide synthetase module-containing protein
           [Coxiella burnetii Dugway 5J108-111]
          Length = 499

 Score = 96.4 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 40/333 (12%), Positives = 94/333 (28%), Gaps = 29/333 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP+Y  D   L    ++       + V +  ++K      +   L +        S YE
Sbjct: 20  GTPFYGYDSTVLEKTFNSLREALPKS-VDIFYSIKANPNIAICSELRRLGACAELCSYYE 78

Query: 63  VMLG-HEKFGGETHAY-NVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIG 119
           ++      F      +   A  D EI   L      I+  ++ +  +  + A +  KK  
Sbjct: 79  ILAAIKAGFNPSNIIFVGPAKSDKEIQKCLELGVYAIVCESIEEFKRISNLANRAGKKAR 138

Query: 120 LRINPSVSYS-KFILADPNRPFSRLGEKCKD-------KIESEIKNVNGLMFHNNCEN-- 169
           + +  + S+  K  L       S+ G   +         ++    N+ G+  +N      
Sbjct: 139 VALRINPSHVSKSALLKMGGKPSQFGMDEEIVFSNKNFFLKMPNINLVGIHVYNGTRILK 198

Query: 170 --KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
                   + +L         +    E + +GG          V      +    +  + 
Sbjct: 199 AETIVENTTYILNLARTFQKEWHQSFEMVDIGG---------WVITHWSSVPSIIQLLNQ 249

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPNTG 286
              L+       + +      L +    +  +   ++   ++               N  
Sbjct: 250 LKKLKKENFPSVSYSIFCGEALTLDTVRRWKLAAPNTTVDNLYGPTEATVAITGYLWNEN 309

Query: 287 PYT--AMVCGRSCLAGDIFGEFHFEKPVKIGDR 317
            +     +       G    +    + +K G+ 
Sbjct: 310 DHNDLVPIGWPFAGQGFYLLDER-GQEIKEGEV 341


>gi|198430949|ref|XP_002123942.1| PREDICTED: similar to Ornithine decarboxylase (ODC) [Ciona
           intestinalis]
          Length = 298

 Score = 96.4 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 67/207 (32%), Gaps = 6/207 (2%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +YL D  +++ NL           ++   A+KC  +  +   L     G   +S +E+  
Sbjct: 49  FYLGDLGQVVRNLQMWTKHM--PKIRPYYAMKCNPSQPVVQLLASLGVGFDCASKFEIET 106

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             +     E   + V  K              +    +     K K      K+ LR+N 
Sbjct: 107 ALKCGVKPEDILFAVPCKMSSHIEYACQTGVQVMTVDNADELHKIKRIHPTGKLLLRLNV 166

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM---LKN 181
                   + D         +K     +S   N+NG+ +H     +SF C  +     K 
Sbjct: 167 CEFEEGVRMGDKFGASMSDAKKLVLLCKSLNLNLNGICYHPGSGVESFECIMSCLQQCKE 226

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKD 208
           +          ++ I +GGG    +  
Sbjct: 227 LYDFAASNGVDLKTIDIGGGFLCGENF 253


>gi|29561807|emb|CAD87803.1| antizyme inhibitor 1 [Danio rerio]
          Length = 436

 Score = 96.4 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 55/401 (13%), Positives = 121/401 (30%), Gaps = 49/401 (12%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           + + D   L+              V+    + C ++  + + L+    G   ++  E  L
Sbjct: 40  FVVADLGALMRQHVVWKTTMPL--VRPFYPVSCNSSPVVIELLSALGVGFVCANKAETTL 97

Query: 66  GHEK-FGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                   E    +   K   +    +      ++    ++L K      +    + +  
Sbjct: 98  VLSHDVPPENIILSGVCKQLSLIKHAAKTGINFLLCENEAELRKIARAHPEAKLLLQVST 157

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
              +  +   +    +    L E  K+   S    V G+ F      K    ++  L + 
Sbjct: 158 EAQIEEASVTIGCSLKGCRHLLELAKELNVS----VAGVTFQVPASCKDPQAYTHALSDA 213

Query: 183 EKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-----QIYLEPG 234
              F         +  + +GGG   ++  + +K     ++   E Y        I  EPG
Sbjct: 214 RCIFDMGKELGFDMNILDIGGGFSGSE--FQLKQVHSVIRPLLEAYFPSESGVSIIAEPG 271

Query: 235 EAIVTNTTTLNTTVLDIS--ENIKNLVIVDSSVEAHVPDYLLYQ---------------- 276
              V +  TL   V+         +    D    +  P+++ Y                 
Sbjct: 272 NFFVFSCFTLAVNVIGKKAAYRNLHTSTHDKLTSSDAPEFVYYMNDGVYGSFMGRLFGNI 331

Query: 277 ------ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                    ++  +   +++ + G SC   D   E      + +GD + F ++       
Sbjct: 332 ISTPSVHKMSLTLDEPVFSSSLWGPSCDPLDQVVERCLLPELAVGDWLVFSNMGASGQEG 391

Query: 331 KNWFNGINMPTIAV-KNVDGTIKAIREF---SYNDYYNNLS 367
              F+  + P +    + D   +   +    S +D   NLS
Sbjct: 392 PATFSDTDQPPVYYTISTDDWFEM--QEAGISLDDTMKNLS 430


>gi|300781330|ref|ZP_07091184.1| diaminopimelate decarboxylase [Corynebacterium genitalium ATCC
           33030]
 gi|300533037|gb|EFK54098.1| diaminopimelate decarboxylase [Corynebacterium genitalium ATCC
           33030]
          Length = 909

 Score = 96.4 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 55/384 (14%), Positives = 118/384 (30%), Gaps = 64/384 (16%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +P  +++ + +L N+D  +    + GV  K+  A K        DT+     G   +S  
Sbjct: 502 SPVNVLNPEPMLANVDELVSAGASTGVEVKIFFARKANKGLVFVDTMRDAGHGVDVASEN 561

Query: 62  EVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+    +    GE    + A   D  ++  ++N   I  + V++L +    A      + 
Sbjct: 562 ELRQVLDRGVPGERIILSAAIKSDALLELAIANGVVISADNVTELERIIAIAGDRTALVA 621

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK-IESEIKNVNGLMFHNNCENKSFLCFS-A 177
            R+ P  +        P R   R     +     +    V G+  H +    +    +  
Sbjct: 622 PRLAPDPTT-----MPPTRFGERSEVWAQRLSEPAGSVTVAGVHVHLHGYAAADRSAALR 676

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF----------------------- 214
               +  +        ++I +GGG+  +  D   +                         
Sbjct: 677 ECVGLVDKLRASGHDPQFIDVGGGVPMSYLDDEEQWNHAQDSLRAMREGYAEPFTWKGDP 736

Query: 215 ---------------------CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE 253
                                   + +   K  ++++LEPG +++     +  TV     
Sbjct: 737 LHNTYPYWQRPVRGAWLRDVLADGVAQELTKRGLRLHLEPGRSLLDGCGLILATVEFTKH 796

Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESATIY-------PNTGPYTAMVCGRSCLAGDIFGEF 306
               L +V  ++                               A + G  C+  ++    
Sbjct: 797 RSDGLPLVGLAMNRTQCRTTSDDYLVDPILVTDAPGSTDEEVEAFLVGAYCIEDEVILRR 856

Query: 307 --HFEKPVKIGDRISFEDVAGYNI 328
              F + V+ GD ++  + AGY +
Sbjct: 857 RIRFPRGVRPGDIVAIPNTAGYFM 880


>gi|259506368|ref|ZP_05749270.1| diaminopimelate decarboxylase [Corynebacterium efficiens YS-314]
 gi|259166046|gb|EEW50600.1| diaminopimelate decarboxylase [Corynebacterium efficiens YS-314]
          Length = 888

 Score = 96.4 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 54/383 (14%), Positives = 112/383 (29%), Gaps = 62/383 (16%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P  ++    +  N++  +      GV  ++  A K        D +     G   +S 
Sbjct: 463 GSPVNVLHSGSMPRNINELVEAGAQMGVDTRIFFARKANKGLTFVDAVRDAGHGVDVASE 522

Query: 61  YEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E+         GE    + A   D  ++  ++N   I  ++  + ++    A     ++
Sbjct: 523 RELSQVLGRGVPGERIILSAAIKPDSLLELAIANGVVISADSRDEFDRIAALAGDSLARV 582

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK-IESEIKNVNGLMFHNNCENKSFLCFS- 176
             R+ P  +        P R   R+G+  +         ++ GL  H +  +      + 
Sbjct: 583 APRVAPDPAT-----MPPTRFGERVGDWARHLAAPVPGVDIVGLHVHLHGYSAVDRAAAL 637

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTD--------------------KDYPVKDFCQ 216
                +            +I LGGG+  +                        P      
Sbjct: 638 RECCELVDALTTAGHTPRFIDLGGGVPMSYLDSTEQWLKYQSARSAAVDGYADPFTWKSD 697

Query: 217 RLKEFSEKYSVQI------------------------YLEPGEAIVTNTTTLNTTVLDIS 252
            L      +   +                        +LEPG +++     +   V  + 
Sbjct: 698 PLNTTYPYHQTPVRGPWLKQVLGDGVAEMLIERGLRLHLEPGRSLLDGCGLILAEVAFVK 757

Query: 253 ENIKNLV-----IVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEF- 306
                +      +  +       DYL+     T   +     A + G  C+  ++     
Sbjct: 758 TRSDGVPLVGLAMNRTQCRTTSDDYLVDPLHITDEADGEEREAFLVGAYCIEDELILRRR 817

Query: 307 -HFEKPVKIGDRISFEDVAGYNI 328
             F + VK GD I   + AGY +
Sbjct: 818 IRFPRGVKAGDIIGIPNTAGYFM 840


>gi|25027975|ref|NP_738029.1| hypothetical protein CE1419 [Corynebacterium efficiens YS-314]
 gi|23493258|dbj|BAC18229.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
          Length = 894

 Score = 96.4 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 54/383 (14%), Positives = 112/383 (29%), Gaps = 62/383 (16%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P  ++    +  N++  +      GV  ++  A K        D +     G   +S 
Sbjct: 469 GSPVNVLHSGSMPRNINELVEAGAQMGVDTRIFFARKANKGLTFVDAVRDAGHGVDVASE 528

Query: 61  YEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E+         GE    + A   D  ++  ++N   I  ++  + ++    A     ++
Sbjct: 529 RELSQVLGRGVPGERIILSAAIKPDSLLELAIANGVVISADSRDEFDRIAALAGDSLARV 588

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK-IESEIKNVNGLMFHNNCENKSFLCFS- 176
             R+ P  +        P R   R+G+  +         ++ GL  H +  +      + 
Sbjct: 589 APRVAPDPAT-----MPPTRFGERVGDWARHLAAPVPGVDIVGLHVHLHGYSAVDRAAAL 643

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTD--------------------KDYPVKDFCQ 216
                +            +I LGGG+  +                        P      
Sbjct: 644 RECCELVDALTTAGHTPRFIDLGGGVPMSYLDSTEQWLKYQSARSAAVDGYADPFTWKSD 703

Query: 217 RLKEFSEKYSVQI------------------------YLEPGEAIVTNTTTLNTTVLDIS 252
            L      +   +                        +LEPG +++     +   V  + 
Sbjct: 704 PLNTTYPYHQTPVRGPWLKQVLGDGVAEMLIERGLRLHLEPGRSLLDGCGLILAEVAFVK 763

Query: 253 ENIKNLV-----IVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEF- 306
                +      +  +       DYL+     T   +     A + G  C+  ++     
Sbjct: 764 TRSDGVPLVGLAMNRTQCRTTSDDYLVDPLHITDEADGEEREAFLVGAYCIEDELILRRR 823

Query: 307 -HFEKPVKIGDRISFEDVAGYNI 328
             F + VK GD I   + AGY +
Sbjct: 824 IRFPRGVKAGDIIGIPNTAGYFM 846


>gi|303232781|ref|ZP_07319466.1| pyridoxal-dependent decarboxylase, C-terminal sheet domain protein
           [Atopobium vaginae PB189-T1-4]
 gi|302481267|gb|EFL44342.1| pyridoxal-dependent decarboxylase, C-terminal sheet domain protein
           [Atopobium vaginae PB189-T1-4]
          Length = 454

 Score = 96.4 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 48/397 (12%), Positives = 109/397 (27%), Gaps = 47/397 (11%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGV------KLLLALKCFAAWGMFDTLNQYMDGTTS 57
           TP Y+ +       L     I  ++ V       +  ++K      +    +        
Sbjct: 48  TPTYIFNVPAFRARLAKTRDIVTSSDVNASARISMCYSMKANPF--LIAAAHSEHYKLEV 105

Query: 58  SSLYEVMLGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114
            S  E+ +       G    Y+      D    A+  +   +   +  QL      A +L
Sbjct: 106 CSPGELDICIAQHIPGARIVYSGVCKQPDDIRAALSYHVGVLTAESPLQLEAINRVATEL 165

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-NVNGLMFHNNCENKSFL 173
           H    L  +      +              E       +       G+ +    + K   
Sbjct: 166 HAAGELAYSRVPILLRLNAKSQFGMAQSDLEALIAARNTFPLLEFVGIHYFVGTQRKKLA 225

Query: 174 CFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-- 227
                   +   I+  +  +  + + +  G G+ +                         
Sbjct: 226 RQQKELAFLSDLIDTLYDSYGWRAQLLEYGPGLAYPYFVDDDMSDTYAPARELAPLLQKL 285

Query: 228 ----QIYLEPGEAIVTNTTTLNTTVLDISE----------------NIKNLVIVDSSVEA 267
                I +E G  + +   T  + ++D+ +                ++  L  +      
Sbjct: 286 AQKVDICIEMGRFLASACGTYVSRIVDLKQGADSDSYYAFIDGGINHVAYLGQMMGLKCP 345

Query: 268 HVPDYLLYQESAT-------IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
           H+        S           P        +CG  C   D+     FE P+ +GD ++F
Sbjct: 346 HIDVVPGAAASVCEDTGVVQSAPARQMRRWTLCGSLCTTADVLVRE-FEAPLAMGDLLAF 404

Query: 321 EDVAGYNINRKN-WFNGINMPTIAVKNVDGTIKAIRE 356
           + +  Y++      F    +P++ +       + +R+
Sbjct: 405 QHIGAYSVTEAMYLFLSRTLPSVVLYYDSEHYECVRK 441


>gi|302503565|ref|XP_003013742.1| hypothetical protein ARB_07853 [Arthroderma benhamiae CBS 112371]
 gi|291177308|gb|EFE33102.1| hypothetical protein ARB_07853 [Arthroderma benhamiae CBS 112371]
          Length = 425

 Score = 96.0 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 44/371 (11%), Positives = 99/371 (26%), Gaps = 68/371 (18%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+ ++D   + +  +         GV                               E++
Sbjct: 53  PFCVMDLGYVHDQYEHWEKTL--PGVTPFY---------------------------ELV 83

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
           L  +        +    K         N         ++    K K      ++ LR   
Sbjct: 84  LA-QGIPAARILFANPCKSPSDITFARNTGVNRMTFDNEAELHKIKQLFPESQLILRCFA 142

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
           S   + + L+           +  +  +S   NV G+ FH     +    F   +++  +
Sbjct: 143 SDPSATYSLSAKFGAHPETSVRLLECAKSLRLNVIGVSFHIGSGARDPNAFEIAIESSRR 202

Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            F         +  + +GGG   +  +       + L       +V++  EPG       
Sbjct: 203 IFDAGIRIGHSMRLLDIGGGFSESTFEDMAASIQRSLDFHFRDINVELVAEPGRYFAAGA 262

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT------------ 289
            T+   ++   +  +     + +      +  +Y   ++      P+             
Sbjct: 263 MTIACEIIARRDAKEAPPSAEEASNMLYLNDGVYGTFSSSLFEPSPHPRVLRASGVFYPQ 322

Query: 290 --------AMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVA--------------GY 326
                    ++ G +C   D   +       +  GD + F D+                Y
Sbjct: 323 PAAGDQVKNILWGPTCDGVDCIAKDVELPERLTFGDWLYFPDMGVSYPCFLAFTDLMPAY 382

Query: 327 NINRKNWFNGI 337
           +      FNG 
Sbjct: 383 STCLATGFNGF 393


>gi|163803506|ref|ZP_02197376.1| carboxynorspermidine decarboxylase [Vibrio sp. AND4]
 gi|159172682|gb|EDP57533.1| carboxynorspermidine decarboxylase [Vibrio sp. AND4]
          Length = 149

 Score = 95.6 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 66/142 (46%), Positives = 92/142 (64%), Gaps = 2/142 (1%)

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP--NT 285
           Q+YLEPGEAI+T TT L  TV+D+ EN K   IVDS+ EAH  D L+Y E A+I      
Sbjct: 3   QMYLEPGEAIITKTTDLVVTVVDVVENEKKTAIVDSATEAHRLDTLVYNEPASIREASEN 62

Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
           G Y  ++   SCLAGD F   +FE+P++IG R+   D AGY + + NWFNG+ MP+I  +
Sbjct: 63  GKYEYVIGSCSCLAGDQFCVTNFEQPIEIGQRLHILDSAGYTMVKLNWFNGLRMPSIYCE 122

Query: 346 NVDGTIKAIREFSYNDYYNNLS 367
             +G ++ + EF Y+D+  +LS
Sbjct: 123 RSNGEVQKLNEFDYSDFKRSLS 144


>gi|145296096|ref|YP_001138917.1| hypothetical protein cgR_2017 [Corynebacterium glutamicum R]
 gi|140846016|dbj|BAF55015.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 884

 Score = 95.6 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 56/387 (14%), Positives = 110/387 (28%), Gaps = 70/387 (18%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P  ++    +  N++  +      GV  ++  A K        D +     G   +S 
Sbjct: 478 GSPVNVLHSGSMPRNINELVDAGIEMGVDTRIFFARKANKGLTFVDAVKDTGHGVDVASE 537

Query: 61  YEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E+         GE    + A   D  +   + N   I  ++  +L++          ++
Sbjct: 538 RELSQVLNRGVPGERIILSAAIKPDRLLALAIENGVIISVDSRDELDRISALVGDRVARV 597

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMF-HNNCENKSFLCFSA 177
             R+ P              P +R GE+  D      + + G+     +     +     
Sbjct: 598 APRVAPDP---------AVLPPTRFGERAADWGNRLTEVIPGVDIVGLHVHLHGYAAKDR 648

Query: 178 MLKNIEKE-----FGHFITQIEWISLGGGIHF---------------------------- 204
            L   E               ++I LGGG+                              
Sbjct: 649 ALALQECCQLVDSLRECGHSPQFIDLGGGVPMSYIESEEDWIRYQSAKSATSAGYAESFT 708

Query: 205 --------TDKDYPVKDFCQRLK--------EFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248
                   T   Y        LK        +      ++++LEPG +++         V
Sbjct: 709 WKDDPLSNTYPFYQTPVRGNWLKDVLSKGVAQMLIDRGLRLHLEPGRSLLDGCGVTLAEV 768

Query: 249 LDISENIKNLV-----IVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF 303
             +      L      +  +       D+L+     T         A + G  C+  ++ 
Sbjct: 769 AFVKTRSDGLPLVGLAMNRTQCRTTSDDFLIDPLHITDGDVGEEIEAYLVGAYCIEDELI 828

Query: 304 GEFH--FEKPVKIGDRISFEDVAGYNI 328
                 F + +K GD I   + AGY +
Sbjct: 829 LRRRIRFPRGIKPGDIIGIPNTAGYFM 855


>gi|154246672|ref|YP_001417630.1| Orn/DAP/Arg decarboxylase 2 [Xanthobacter autotrophicus Py2]
 gi|154160757|gb|ABS67973.1| Orn/DAP/Arg decarboxylase 2 [Xanthobacter autotrophicus Py2]
          Length = 432

 Score = 95.6 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 51/366 (13%), Positives = 98/366 (26%), Gaps = 36/366 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSSLYEV 63
           P Y      L  +    +        K   A+K      + D L +        +S  E 
Sbjct: 38  PVYCFRPHVLAADARAFVEAFPG---KTAYAVKTNGEPMVLDVLAKAGISAFDVASPAEF 94

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG---- 119
                   G    Y    K      +      I    +   ++     + +         
Sbjct: 95  AAARAAAPGAELLYMHPVKAQSDIRLALEHYRIRSTALDHEDEVAKIVRIVRALDLDPED 154

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-KNVN-GLMFHNNCENKSFLCFSA 177
           L +   ++       + ++ F        + ++      +  GL FH   + +    ++ 
Sbjct: 155 LTLFVRIASKGDAAYELSKKFGAAPGHAAELLQRIHGIGIKCGLCFHVGSQVEDPDTYAR 214

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---------KDFCQRLKEFSEKYSV- 227
            +    +        I  + +GGG   T    P           +    L    E+    
Sbjct: 215 AVAVAAEVRAAAGVPIVALDVGGGFPATYARNPRRPVPPMPPLDEIISGLMGAVERNGFA 274

Query: 228 --QIYLEPGEAIVTNTTTLNTTVLDISENIKN------------LVIVDSSVEAHVPDYL 273
              +  EPG  IV    ++   VL                              H+PD  
Sbjct: 275 GTPLVAEPGRVIVARAFSVIVRVLLKKGQRLYINDGIWSSLSDSWTGKILLPVRHIPDPA 334

Query: 274 LYQESATIYPNTGP-YTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRK 331
             +        +G      + G +C + D+     F    V  GD I    +  Y+++ +
Sbjct: 335 RRRRPGRGASGSGRIEPFRIYGATCDSVDVLSRPFFLPESVDTGDWIEIGHIGAYSLSLR 394

Query: 332 NWFNGI 337
             FNG 
Sbjct: 395 TRFNGF 400


>gi|62390971|ref|YP_226373.1| decarboxylase [Corynebacterium glutamicum ATCC 13032]
 gi|41326310|emb|CAF20472.1| decarboxylase [Corynebacterium glutamicum ATCC 13032]
          Length = 884

 Score = 95.6 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 57/387 (14%), Positives = 110/387 (28%), Gaps = 70/387 (18%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P  ++    +  N++  +      GV  ++  A K        D +     G   +S 
Sbjct: 478 GSPVNVLHSGSMPRNINELVDAGIQMGVDTRIFFARKANKGLTFVDAVKDTGHGVDVASE 537

Query: 61  YEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E+         GE    + A   D  +   + N   I  ++  +L++          ++
Sbjct: 538 RELSQVLNRGVPGERIILSAAIKPDRLLALAIENGVIISVDSRDELDRISALVGDRVARV 597

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMF-HNNCENKSFLCFSA 177
             R+ P              P +R GE+  D      + + G+     +     +     
Sbjct: 598 APRVAPDP---------AVLPPTRFGERAADWGNRLTEVIPGVDIVGLHVHLHGYAAKDR 648

Query: 178 MLKNIEKE-----FGHFITQIEWISLGGGIHF---------------------------- 204
            L   E               ++I LGGG+                              
Sbjct: 649 ALALQECCQLVDSLRECGHSPQFIDLGGGVPMSYIESEEDWIRYQSAKSATSAGYAESFT 708

Query: 205 --------TDKDYPVKDFCQRLK--------EFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248
                   T   Y        LK        +      ++++LEPG +++         V
Sbjct: 709 WKDDPLSNTYPFYQTPVRGNWLKDVLSKGVAQMLIDRGLRLHLEPGRSLLDGCGVTLAEV 768

Query: 249 LDISENIKNLV-----IVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF 303
             +      L      +  +       D+L+     T         A + G  C+  ++ 
Sbjct: 769 AFVKTRSDGLPLVGLAMNRTQCRTTSDDFLIDPLHITDGDVGEEIEAYLVGAYCIEDELI 828

Query: 304 GEFH--FEKPVKIGDRISFEDVAGYNI 328
                 F + VK GD I   + AGY +
Sbjct: 829 LRRRIRFPRGVKPGDIIGIPNTAGYFM 855


>gi|23308900|ref|NP_601336.2| diaminopimelate decarboxylase [Corynebacterium glutamicum ATCC
           13032]
 gi|21324905|dbj|BAB99528.1| Diaminopimelate decarboxylase [Corynebacterium glutamicum ATCC
           13032]
          Length = 429

 Score = 95.6 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 57/387 (14%), Positives = 110/387 (28%), Gaps = 70/387 (18%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P  ++    +  N++  +      GV  ++  A K        D +     G   +S 
Sbjct: 23  GSPVNVLHSGSMPRNINELVDAGIQMGVDTRIFFARKANKGLTFVDAVKDTGHGVDVASE 82

Query: 61  YEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E+         GE    + A   D  +   + N   I  ++  +L++          ++
Sbjct: 83  RELSQVLNRGVPGERIILSAAIKPDRLLALAIENGVIISVDSRDELDRISALVGDRVARV 142

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMF-HNNCENKSFLCFSA 177
             R+ P              P +R GE+  D      + + G+     +     +     
Sbjct: 143 APRVAPDP---------AVLPPTRFGERAADWGNRLTEVIPGVDIVGLHVHLHGYAAKDR 193

Query: 178 MLKNIEKE-----FGHFITQIEWISLGGGIHF---------------------------- 204
            L   E               ++I LGGG+                              
Sbjct: 194 ALALQECCQLVDSLRECGHSPQFIDLGGGVPMSYIESEEDWIRYQSAKSATSAGYAESFT 253

Query: 205 --------TDKDYPVKDFCQRLK--------EFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248
                   T   Y        LK        +      ++++LEPG +++         V
Sbjct: 254 WKDDPLSNTYPFYQTPVRGNWLKDVLSKGVAQMLIDRGLRLHLEPGRSLLDGCGVTLAEV 313

Query: 249 LDISENIKNLV-----IVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF 303
             +      L      +  +       D+L+     T         A + G  C+  ++ 
Sbjct: 314 AFVKTRSDGLPLVGLAMNRTQCRTTSDDFLIDPLHITDGDVGEEIEAYLVGAYCIEDELI 373

Query: 304 GEFH--FEKPVKIGDRISFEDVAGYNI 328
                 F + VK GD I   + AGY +
Sbjct: 374 LRRRIRFPRGVKPGDIIGIPNTAGYFM 400


>gi|271962014|ref|YP_003336210.1| diaminopimelate decarboxylase-like protein [Streptosporangium
           roseum DSM 43021]
 gi|270505189|gb|ACZ83467.1| Diaminopimelate decarboxylase-like protein [Streptosporangium
           roseum DSM 43021]
          Length = 276

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 24/180 (13%), Positives = 52/180 (28%), Gaps = 15/180 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+  +                ++  A K F    M   + +   G    S  E
Sbjct: 50  GTPAYVLDETDVRERCRAYRAAL--PDAEIAYAAKAFLCRAMAGWVREEGLGLDVCSGGE 107

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQK-LHKKI 118
           +       F  +   ++   K  +    AV +    I+ + ++++N+          +K+
Sbjct: 108 LTFACSIGFPADRIIFHGNAKTPQELRGAVAAGVGRIVVDNLAEINRLAALIPAGRRQKV 167

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCK---------DKIESEIKNVNGLMFHNNCEN 169
            LR+ P +               + G               +      + GL        
Sbjct: 168 LLRVIPDIEGGAHEATRTGGEDQKFGLSVATGAAGQAVTRVLGQPSLKLAGLHCEAGDTI 227



 Score = 67.1 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 1/51 (1%)

Query: 292 VCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
           + G  C AGD   E       ++ GD I       Y+ +  + +N    P+
Sbjct: 216 LAGLHCEAGDTIAEDVELPADIRPGDVIVVAATGAYHHSMASTYNMTARPS 266


>gi|144897740|emb|CAM74604.1| ornithine decarboxylase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 328

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/301 (10%), Positives = 85/301 (28%), Gaps = 16/301 (5%)

Query: 55  TTSSSLYEVMLGHEKFGGETHAYNVAYKDC---EIDAVLSNCDTIIFNTVSQLNKFKDKA 111
              +S  EV L           +    K            +    + ++ ++L K  ++ 
Sbjct: 4   FDCASAGEVALVRHTLPRAQIHFMHPIKARSAIREAWERHDVRDFVVDSAAELGKVIEET 63

Query: 112 QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE-IKNVNGLMFHNNCENK 170
           +    ++G+ +  ++           +  +   +       +  +    G+ FH   +  
Sbjct: 64  RHRPGRLGIIVRLALPKGSARYDLSGKFGADRDDAVALLRMAAAVAGRVGISFHVGSQCC 123

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY 230
               ++  L    +    +   ++ + +GGG   +  D             +  ++    
Sbjct: 124 DPAAWTRALDLTAEVLAAYGRPVDIVDVGGGFPVSYPDVTPPPLADFFAAIAAGFARLNL 183

Query: 231 LEPGEAIVTNTTTLNTT----VLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY---- 282
               +        L       V+ I     +++ ++  +   + D               
Sbjct: 184 PAATQLWCEPGRALVAPGQSLVVRIEGRRGDMLYINDGIYGSLSDAGAPGFRFPCRLIRL 243

Query: 283 ---PNTGPYTAMVCGRSCLAGDIF-GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
                         G +C + D   G F      + GD I    +  Y  + +  FNG +
Sbjct: 244 NGESVAADQPFAFFGPTCDSADRMNGPFLLPADSREGDWIEIGQLGAYGASLRTGFNGFD 303

Query: 339 M 339
           +
Sbjct: 304 L 304


>gi|55742262|ref|NP_001007160.1| antizyme inhibitor 1 [Danio rerio]
 gi|38541987|gb|AAH61960.1| Antizyme inhibitor 1 [Danio rerio]
          Length = 436

 Score = 95.2 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 55/401 (13%), Positives = 121/401 (30%), Gaps = 49/401 (12%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           + + D   L+              V+    + C ++  + + L+    G   ++  E  L
Sbjct: 40  FVVADLGALMRQHVVWKTTMPL--VRPFYPVSCNSSPVVIELLSALGVGFVCANKAETTL 97

Query: 66  GHEK-FGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                   E    +   K   +    +      ++    ++L K      +    + +  
Sbjct: 98  VLSHDVPPENIILSGVCKQLLLIKHAAKTGINFLLCENEAELRKIARAHPEAKLLLQVST 157

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
              +  +   +    +    L E  K+   S    V G+ F      K    ++  L + 
Sbjct: 158 EAQIEEASVTIGCSLKGCRHLLELAKELNVS----VAGVTFQVPASCKDPQAYTHALSDA 213

Query: 183 EKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-----QIYLEPG 234
              F         +  + +GGG   ++  + +K     ++   E Y        I  EPG
Sbjct: 214 RCIFDMGKELGFDMNILDIGGGFSGSE--FQLKQVHSVIRPLLEAYFPSESGVSIIAEPG 271

Query: 235 EAIVTNTTTLNTTVLDIS--ENIKNLVIVDSSVEAHVPDYLLYQ---------------- 276
              V +  TL   V+         +    D    +  P+++ Y                 
Sbjct: 272 NFFVFSCFTLAVNVIGKKAAYRDLHTSTHDKLTSSEAPEFVYYMNDGVYGSFMGRLFGNI 331

Query: 277 ------ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
                    ++  +   +++ + G SC   D   E      + +GD + F ++       
Sbjct: 332 ISTPSVHKMSLTLDEPVFSSSLWGPSCDPLDQVVERCLLPELAVGDWLVFINMGASGQEG 391

Query: 331 KNWFNGINMPTIAV-KNVDGTIKAIREF---SYNDYYNNLS 367
              F+  + P +    + D   +   +    S +D   NLS
Sbjct: 392 PATFSDTDQPPVYYTISTDDWFEM--QEAGISLDDTMKNLS 430


>gi|290955117|ref|YP_003486299.1| lysine/ornithine decarboxylase [Streptomyces scabiei 87.22]
 gi|260644643|emb|CBG67728.1| putative lysine/ornithine decarboxylase [Streptomyces scabiei
           87.22]
          Length = 448

 Score = 95.2 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 59/411 (14%), Positives = 121/411 (29%), Gaps = 78/411 (18%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           PY+++  ++   N      +   AGV  ++  A K   A    +       G   +S  E
Sbjct: 32  PYHVLLPERFDANAAAFRRVFAEAGVDGRVYYAKKANKAAVYAERAAVAGLGVDVASQGE 91

Query: 63  VMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           +         G +      A  D  +   +     I  + + +L++    A++L +   +
Sbjct: 92  LREALAAGVRGEDLVVTGPAKVDDLLRVAVLQGALIAVDALDELDRLLSLAEQLGRTARV 151

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLM-------FHNNCENKSFL 173
            +                  SR G    +   +  + V G +         +  + +   
Sbjct: 152 LLRRLPPGQPH---------SRFGLDDGELDAALRRCVTGPVEMEGFSFHLSGYDTRQRA 202

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGG----------------------------IHFT 205
             +A    +         + + IS+GGG                                
Sbjct: 203 DLAAESIGLCTRARALGLRADRISIGGGFAVDYVGAEEWRRFEESRRPEHFHAEKSFGGF 262

Query: 206 DKDYPVKDFCQRLKEFSEKYS-----------------VQIYLEPGEAIVTNTTTLNTTV 248
              +        L+                        V + +EPG A++         V
Sbjct: 263 YPYHSPVAGADALRTILATTPAGAGEGTTLAGLLRAAGVTLLVEPGRALLDQAGFTVFRV 322

Query: 249 LDISENIKNLVIVDSS----------VEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCL 298
             + E     ++                  +PD +L    +    + GPY A V   +CL
Sbjct: 323 QGVKERDGYALLTVDGSSLSLSEQWFDSEFLPDPVLVPAGSGPRADAGPYPACVGAATCL 382

Query: 299 AGDIFGEFHFEKPVKI--GDRISFEDVAGYNINRK-NWFNGINMPTIAVKN 346
             D+        P++   GD + + + AGY ++   + F+ + +P  AV  
Sbjct: 383 ESDMLTWRKVPFPLRPAAGDLLVYLNTAGYQMDSNESPFHDLPLPPKAVVE 433


>gi|18652917|dbj|BAB84695.1| antizyme inhibitor [Danio rerio]
          Length = 419

 Score = 95.2 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 46/353 (13%), Positives = 102/353 (28%), Gaps = 39/353 (11%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           + + D   L+              V+    + C ++  + + L+    G   ++  E  L
Sbjct: 40  FVVADLGALMRQHVAWKTTMPL--VRPFYPVSCNSSPVVIELLSALGVGFVCANKAETTL 97

Query: 66  GHEK-FGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                   E    +   K   +    +      ++    ++L K      +    + +  
Sbjct: 98  VLSHDVPPENIILSGVCKQLSLIKHAAKTGINFLLCENEAELRKIARAHPEAKLLLQVST 157

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
              +  +   +    +    L E  K+   S    V G+ F      K    ++  L + 
Sbjct: 158 EAQIEEASVTIGCSLKGCRHLLELAKELNVS----VAGVTFQVPASCKDPQAYTHALSDA 213

Query: 183 EKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQ---RLKEFSEKYSVQIYLEPGEA 236
              F         +  + +GGG   ++                 F  +  V I  EPG  
Sbjct: 214 RCIFDMGKELGFDMNILDIGGGFSGSEFQLKQVHSVIRPLLEAYFPSESGVSIIAEPGNF 273

Query: 237 IVTNTTTLNTTVLDIS--ENIKNLVIVDSSVEAHVPDYLLYQ------------------ 276
            V +  TL   V+         +    D    +  P+++ Y                   
Sbjct: 274 FVFSCFTLAVNVIGKKAAYRDLHTSTHDKLTSSEAPEFVYYMNDGVYGSFMGRLFGNIIS 333

Query: 277 ----ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
                  ++  +   +++ + G SC   D   E      + +GD + F ++  
Sbjct: 334 TPSVHKMSLTLDEPVFSSSLWGPSCDPLDQVVERCLLPELAVGDWLVFINMGA 386


>gi|41582267|gb|AAS07881.1| hypothetical protein MBMO_EBAC080-L32B05.9 [uncultured marine
           bacterium 463]
          Length = 426

 Score = 95.2 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 64/364 (17%), Positives = 119/364 (32%), Gaps = 15/364 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP  + D   +   +        N  +  LLA+K      +  T  Q++ G   S+L 
Sbjct: 62  LSTPALVFDLDTITARMQALAQTAANQNIACLLAVKSCPREPLLTTAQQHLAGFDVSNLA 121

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E         G+T +        +     +  + ++    S         Q       LR
Sbjct: 122 EYRALPADLSGKTVSLTSPQLTKDYYLFAARGNRLVVTVDSIAQCVNYLQQGAPFPYVLR 181

Query: 122 INPSV----SYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
           I        S + +         + + E+   + + + +   G   H+  E  S   +  
Sbjct: 182 IQGGQLLPTSDAAYTNCSRFGFTAPMLEQLLQRPDVQAQPPCGWHVHHGSEINSAATYQF 241

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI 237
           ++  + K           I+LGGG H  +K      F    K F E     +++EPG+  
Sbjct: 242 LMAGLAKLGAQLPEPPAIINLGGGWHSVEKQQLNDLFALARKVFPEPC--SVFIEPGQWF 299

Query: 238 VTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRS 296
                     V++ S +  NL  V + S++ H+             P        + G S
Sbjct: 300 GKGAGLAVGEVVNKSGDDDNLGCVLNLSMDCHLRWSSPRLLVPVQLPALKFAKVYLGGAS 359

Query: 297 CLAGDIFGEFHFE--------KPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348
           C   D  G F             + +G R+   +++ Y++     FNGI   T       
Sbjct: 360 CYEADSLGCFMLPYRQDLAHDTSLGLGCRVLLSNISLYSLAWNQGFNGIAPATEYWLRNG 419

Query: 349 GTIK 352
             ++
Sbjct: 420 LALE 423


>gi|257413467|ref|ZP_05591664.1| protein TabA [Roseburia intestinalis L1-82]
 gi|257203426|gb|EEV01711.1| protein TabA [Roseburia intestinalis L1-82]
          Length = 148

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 49/126 (38%), Gaps = 3/126 (2%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRK-NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP++L D++ +  N          N G +   A+K      + D L +Y  G   +SL 
Sbjct: 20  PTPFHLYDEKGIRENAKAVKEAFSWNPGFREYFAVKATPNPYILDILKEYDCGCDCASLT 79

Query: 62  EVMLGH-EKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+ML   + F G+   ++       E          I  +  + ++  +    K+ + I 
Sbjct: 80  ELMLADSQGFDGKHIMFSSNDTPAEEFKFANELGAIINLDDFTHIDFLEKTIGKIPETIS 139

Query: 120 LRINPS 125
            R NP 
Sbjct: 140 CRYNPG 145


>gi|253317600|gb|ACT22738.1| ornithine decarboxylase [Oncorhynchus mykiss]
          Length = 291

 Score = 94.8 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 67/229 (29%), Gaps = 31/229 (13%)

Query: 147 CKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIH 203
             ++ +    +V G+ FH          +S  + +    F         +  + +GGG  
Sbjct: 23  LLERAKELGLDVIGVSFHVGSGCTDPDTYSQAISDARCVFDMGSEVGFNMTLLDIGGGFP 82

Query: 204 FTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN 257
            ++      +           K F     ++I  EPG   V +  TL   ++     +  
Sbjct: 83  GSEDTKLKFEEITAVINPALDKYFPADSGIRIIAEPGRYYVASAYTLAVNIIAKKVIMNE 142

Query: 258 LVIVDSSVE-----AHVPDYL-----------LYQESATIYPNTGPYT------AMVCGR 295
               D   +       +                         +  P          + G 
Sbjct: 143 QSASDEDDDWTSDRTLMYYVNDGVYGSFNCILYDHAHPLPILHKKPKPDERMYHCSIWGP 202

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344
           +C   D   E      +++G+ + FE++  Y +   + FNG   P I  
Sbjct: 203 TCDGLDRIAEMCTLPDMQVGEWLLFENMGAYTVAASSTFNGFQKPDIYY 251


>gi|387499|gb|AAA39846.1| ornithine decarboxylase (EC 4.1.1.17) [Mus musculus]
          Length = 284

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 70/231 (30%), Gaps = 30/231 (12%)

Query: 147 CKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIH 203
             ++ +    +V G+ FH          F   + +    F         +  + +GGG  
Sbjct: 3   LLERAKELNIDVIGVSFHVGSGCTDPETFVQAVSDARCVFDMATEVGFSMHLLDIGGGFP 62

Query: 204 FTDKDYPVKDFC------QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDIS----- 252
            ++      +           K F     V+I  EPG   V +  TL   ++        
Sbjct: 63  GSEDTKLKFEEITSVINPALDKYFPSDSGVRIIAEPGRYYVASAFTLAVNIIAKKTVWKE 122

Query: 253 --------------ENIKNLVIVDSSVEAHVPDYLLYQE--SATIYPNTGPYTAMVCGRS 296
                                 V  S    + D+   +        P+   Y++ + G +
Sbjct: 123 QPGSDDEDESNEQTFMYYVNDGVYGSFNCILYDHAHVKALLQKRPKPDEKYYSSSIWGPT 182

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
           C   D   E      + +GD + FE++  Y +   + FNG   P I     
Sbjct: 183 CDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTFNGFQRPNIYYVMS 233


>gi|167948474|ref|ZP_02535548.1| diaminopimelate decarboxylase [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 334

 Score = 94.4 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 49/332 (14%), Positives = 99/332 (29%), Gaps = 34/332 (10%)

Query: 58  SSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLH 115
            S +E          GE   +N  +K  EI   +      +  + + ++   +  A ++ 
Sbjct: 2   VSAFEYEKARSHGVPGERILFNGPHKQREILERVVAEGARVHIDNLDEMYTLEAIAAEVG 61

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLG---EKCKDKIESEIKNVNGLMFHNNCENKSF 172
           + I + I  +                  G   +  +    S    + GL  H        
Sbjct: 62  RTIPVTIRLNFDTGYTEPWSRFGFNIETGQALDAARRIGNSPHLRLRGLHSHIGTFILDT 121

Query: 173 LCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY------------------- 209
             +      M   +E        +I+ I +GGG    +  +                   
Sbjct: 122 RAYEAQVRIMCAFMETAESETGCEIDSIDIGGGFASRNALHGTYLPPEQVVPEIEQYAQA 181

Query: 210 --PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVE 266
                    R +    K    + LE G A V +  +L ++V+            V  +  
Sbjct: 182 ICDTLLEATRGRTARGKPQPTLILETGRATVDDAGSLISSVVATKHLPDGRRSAVLDAGV 241

Query: 267 AHVPDYLLYQESATIYPNTG--PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
             +     Y     +       P   ++ G  C+  D+        P+++G+R+    V 
Sbjct: 242 NLLFTSFWYNHRVELAQPPQGIPEETVLYGPLCMNIDVVRASVTLPPLRVGERLVVSPVG 301

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
            YN  +   F     P + + +  G +  IR+
Sbjct: 302 AYNNTQWLQFIEY-RPNVVMTHGGGEVSVIRQ 332


>gi|261819928|ref|YP_003258034.1| Orn/DAP/Arg decarboxylase 2 [Pectobacterium wasabiae WPP163]
 gi|261603941|gb|ACX86427.1| Orn/DAP/Arg decarboxylase 2 [Pectobacterium wasabiae WPP163]
          Length = 588

 Score = 94.1 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 38/373 (10%), Positives = 88/373 (23%), Gaps = 25/373 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           P+++ D    L          K       + +++K  +       + +        S  E
Sbjct: 27  PFFIFDADAALERARHLTAACKEYFPDAVIAVSVKSCSLGIFLRLIAEEGLSAEVCSADE 86

Query: 63  VMLG-HEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
             L     F G+    +  YK  +    A+       + +        +  +    K   
Sbjct: 87  FKLAIKAGFTGDRIILDGPYKNSEDLSIALDKGALIHVDSAHELSEIIRLLSGHNQKIGV 146

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
                                    E           ++ G   H     ++    +  L
Sbjct: 147 GVRLSHFYSDTQRSRFGVTAEEFWDEIVPLLTSCPDISLRGFHLHTGSNLENPSKVTDSL 206

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSE---------KYS 226
           ++        + +   + +G G            P        ++               
Sbjct: 207 RDWLPFLVKNMPEGGHLDMGSGFPADSFSPVVDVPTVQPSAFFRDIFSVLSEYDPALPEK 266

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286
            ++  EPG  +  +        L +     + VI  +     +P    +  S     N  
Sbjct: 267 WKLVFEPGRTLSEDHGYAVGKTLSVKNRYDSQVIQTNLGINWIPSVHNWHHSLLPLGNNK 326

Query: 287 PYT----AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
                   ++ G +C   D          +             Y++   N +     P +
Sbjct: 327 RIPDDTGQILAGFNCFENDSLFPRGPLH-LDDNQLFIIRGCGAYDLQTANEW-TRTRPPV 384

Query: 343 AVKNVDGTIKAIR 355
               ++  I   R
Sbjct: 385 YAL-LNKEIITAR 396


>gi|163803044|ref|ZP_02196930.1| carboxynorspermidine decarboxylase [Vibrio sp. AND4]
 gi|159173218|gb|EDP58047.1| carboxynorspermidine decarboxylase [Vibrio sp. AND4]
          Length = 121

 Score = 94.1 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 54/110 (49%), Positives = 80/110 (72%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +KTPY++I++ KL+ NL+ A  ++  +GVKL+LALKCF+ WG+FD +  Y+DG+TSS  +
Sbjct: 6   LKTPYFMINEDKLIENLEKAKQLKDISGVKLVLALKCFSTWGVFDIIKPYLDGSTSSGPF 65

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA 111
           EV LG+E FGGETHAY+V Y + ++  V   CD +IFN+ SQL  ++   
Sbjct: 66  EVRLGYETFGGETHAYSVGYSEDDVLEVADICDKLIFNSQSQLAAYRHIV 115


>gi|218263200|ref|ZP_03477398.1| hypothetical protein PRABACTJOHN_03081 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222876|gb|EEC95526.1| hypothetical protein PRABACTJOHN_03081 [Parabacteroides johnsonii
           DSM 18315]
          Length = 147

 Score = 94.1 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 42/117 (35%), Gaps = 3/117 (2%)

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLL--YQESATIYP 283
            Q++ EPG +IV    +L + VL +         + D+     +   +   Y     I  
Sbjct: 23  QQVHFEPGRSIVAQCGSLISKVLYVKVGETKKFCILDAGFTELIRPAMYDAYHRMENITS 82

Query: 284 NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
           +       V G  C + D+FG+         GD I+      Y     + +N   +P
Sbjct: 83  DEEVEVYDVVGPICESSDVFGKDVELNRAHRGDLIALRSAGAYGEVMASQYNCRKLP 139


>gi|163757174|ref|ZP_02164275.1| diaminopimelate decarboxylase [Kordia algicida OT-1]
 gi|161322850|gb|EDP94198.1| diaminopimelate decarboxylase [Kordia algicida OT-1]
          Length = 140

 Score = 94.1 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 43/124 (34%), Gaps = 3/124 (2%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            +P Y+ D  K+ +  +           +KL  A+K  +   +   +     G  + S+ 
Sbjct: 14  GSPTYVYDASKITSQYERLTKAFAAVPKLKLHYAVKALSNLSILKLMKSLGAGLDTVSIQ 73

Query: 62  EVMLGH-EKFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           EV LG    F      Y        EI+        I  + +S L +F  K   +   I 
Sbjct: 74  EVQLGLAAGFDASEIMYTPNGVSLQEIEQAAQLGVKINIDNLSILEQFGSKHPTIPVCIR 133

Query: 120 LRIN 123
           +  +
Sbjct: 134 INPH 137


>gi|322800554|gb|EFZ21546.1| hypothetical protein SINV_13532 [Solenopsis invicta]
          Length = 306

 Score = 93.7 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 41/290 (14%), Positives = 91/290 (31%), Gaps = 21/290 (7%)

Query: 72  GETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYS 129
           GE   +   YK             + +  ++  +L K K+   K    I +R +   S  
Sbjct: 10  GERIIFAHPYKLPSHIKFSKQMGVEQMTVDSEFELKKIKNFFPKAKIVIRIRCDAKKSSV 69

Query: 130 KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF--- 186
                    P+ +   +          N+ G  FH          +   ++  ++     
Sbjct: 70  SLGEKFGCEPY-KEAVRLIRYTRDLGLNLYGFSFHVGTTCLEMDAYRRGIEICKQLIVIA 128

Query: 187 -GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV--QIYLEPGEAIVTNTTT 243
                  +E I +GGG         + +  + +    E      ++  EPG   V +  T
Sbjct: 129 KSIGCNNVELIDIGGGFLSVCGKE-LDELAEFINGAIENLDPGIRVISEPGRYYVDSNFT 187

Query: 244 LNTT-------VLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT----GPYTAMV 292
           L +        + +  +  +   +      + + +    Q               + + V
Sbjct: 188 LASYLHSKRLAISENGKLKRMYYMNCGVNNSFMEELKGVQARVPELIFEPMSNEKFLSNV 247

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
            G +    D+  +      + IGD + ++++  Y +   N FNG  +P +
Sbjct: 248 WGPTADPHDLIVKNVSLPELYIGDWLVWKNMGAYTLVLSNTFNGFPIPAV 297


>gi|307702982|ref|ZP_07639929.1| protein tabA [Streptococcus oralis ATCC 35037]
 gi|307623375|gb|EFO02365.1| protein tabA [Streptococcus oralis ATCC 35037]
          Length = 111

 Score = 93.7 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 27/102 (26%), Gaps = 4/102 (3%)

Query: 269 VPDYLLYQESATIYPNTGP---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
           +   +                     V G  C   D F         +IGD +   D   
Sbjct: 1   MRPAMYGAYHHITNLTHPDGPVEVVDVVGSLCENNDKFAVNRELPHTEIGDLLVIHDTGA 60

Query: 326 YNINRKNWFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYNNL 366
           +  +    +N        +   +G  + IR      DY+  L
Sbjct: 61  HGFSMGYQYNAKLRSAEILYTEEGKTRQIRRAERPEDYFATL 102


>gi|306822088|ref|ZP_07455471.1| diaminopimelate decarboxylase [Bifidobacterium dentium ATCC 27679]
 gi|309802513|ref|ZP_07696618.1| diaminopimelate decarboxylase [Bifidobacterium dentium JCVIHMP022]
 gi|304554637|gb|EFM42541.1| diaminopimelate decarboxylase [Bifidobacterium dentium ATCC 27679]
 gi|308220830|gb|EFO77137.1| diaminopimelate decarboxylase [Bifidobacterium dentium JCVIHMP022]
          Length = 524

 Score = 93.7 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 37/266 (13%), Positives = 66/266 (24%), Gaps = 35/266 (13%)

Query: 134 ADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA----MLKNIEKEFGHF 189
                    L      +   ++  + G+  H          F      M+   +  +   
Sbjct: 254 MTMVADGPALAVLKDIQRHQDVLELVGVHSHIGSNIHDADAFIQAAKRMMLLRKTFYATD 313

Query: 190 ITQIEWISLGGGIHFTDKDYPVKDFCQR-----------LKEFSEKYSVQIYLEPGEAIV 238
              +  + LGGG      D                    +       +  I  EPG   V
Sbjct: 314 AYTLPEVDLGGGYSVAYTDGEDSMDIDVELGRLADAVTTVNRALGMPAPVISFEPGRWTV 373

Query: 239 TNTTTLNTTVLDISE---------------NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
             T      V  +                 + +  V VD  +  ++   L   +      
Sbjct: 374 APTGVTLYRVGTVKPVRLNGDATDKAGNPVHERVYVSVDGGMSDNIRPALYGSDYTARLA 433

Query: 284 NTG----PYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGIN 338
           N           V G  C +GDI          +  GD ++      Y     + +N   
Sbjct: 434 NRKGSDDTKLCRVVGMHCESGDIVVNEVRLPADITRGDILAVPVTGVYGRTMASNYNQAL 493

Query: 339 MPTIAVKNVDGTIKAIREFSYNDYYN 364
           +P +           IR  S +D  +
Sbjct: 494 IPAVVGIGETDAHVMIRRQSIDDLLS 519



 Score = 77.1 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 20/154 (12%), Positives = 47/154 (30%), Gaps = 9/154 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTA----LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
            +P Y+ID  ++                N    +  A K   +  +   + +      + 
Sbjct: 34  GSPLYVIDTDEVRARASKFVTSASNAFNNTVTHVSFAGKALLSKEICRIVTEAGMLIDTC 93

Query: 59  SLYEVMLGH-EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           ++ E+ +       G     +   K  E    A+      I+ +  ++  +  D A++L 
Sbjct: 94  TMGEMRIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKIVVDEPNEPARIADIAKRLG 153

Query: 116 KKIG--LRINPSVSYSKFILADPNRPFSRLGEKC 147
           K+    LR+   +               + G   
Sbjct: 154 KRARVMLRVTSGIHAGGHEFVSTAHEDQKFGVAL 187


>gi|332254722|ref|XP_003276481.1| PREDICTED: arginine decarboxylase-like [Nomascus leucogenys]
          Length = 377

 Score = 93.7 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 38/255 (14%), Positives = 84/255 (32%), Gaps = 12/255 (4%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++       +++    V+   A+KC ++ G+   L Q   G + ++  E+ L
Sbjct: 41  FFVADLGAIVR--KHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 98

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             +              K        +     + +  +++   K        K+ L I  
Sbjct: 99  VQQIGVPASKIICANPCKQIAQIKYAAKHGIRLLSFDNEMELAKVVKSHPSAKMVLCIAT 158

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S+S   L+       +      +  +     V G+ FH          ++  + +   
Sbjct: 159 DDSHSLSRLSLKFGVSLKSCRHLLENAKKSHVEVVGVSFHIGSGCPDPQVYAQSIADARL 218

Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPGE 235
            F        ++  + LGGG   T       D    +        F E   V ++ E G 
Sbjct: 219 VFEMGTELGHKMHVLDLGGGFPGTKGAKVRFDQIASVINSALDLYFPEGCGVDVFAELGR 278

Query: 236 AIVTNTTTLNTTVLD 250
             VT+  T+  +++ 
Sbjct: 279 YYVTSAFTVAISIIA 293


>gi|322497353|emb|CBZ32428.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 707

 Score = 93.3 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 37/261 (14%), Positives = 82/261 (31%), Gaps = 21/261 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y+ID  +++  +    +  +   V+   A+K      + + L+    G   +S  E+ 
Sbjct: 258 PFYIIDLGRVVEQMARWRH--ELPMVRPYFAVKSNPQPAVLEVLSALGAGFDCASKEEIH 315

Query: 65  LGHEK---FGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +          +   +    K      +A       +  +   ++ K        H  I 
Sbjct: 316 MVLGHQLVASPDDIIFANPCKQLGDLREAQACGVTYVTVDNPLEMEKISRLMPSAHAIIR 375

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           ++ N S +   F            G    +        V G+ FH    N     + + +
Sbjct: 376 IKTNDSKAQCSFSTKFGAPLEDVEG--LLEAARQFNVTVCGVSFHVGSGNDDQSAYVSAV 433

Query: 180 KNIEKEFG---HFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEFSEKYS----V 227
           ++  + F     +  +   + +GGG   T+          +   + ++    +      V
Sbjct: 434 RDAYQVFQQAVQYGFKCTILDIGGGFPGTEVVEGSGNTSFEAIARTIRPVLAELFGGGDV 493

Query: 228 QIYLEPGEAIVTNTTTLNTTV 248
            I  EPG      +  L   V
Sbjct: 494 TIISEPGRYFTAASHALLMNV 514



 Score = 64.4 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 20/46 (43%)

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
           + G +C + D   +      +K+GD +   D+  Y      +FNG 
Sbjct: 629 IFGPTCDSMDCILKKQPFPEMKLGDWLLVPDMGSYTTAAAGFFNGF 674


>gi|302664901|ref|XP_003024075.1| hypothetical protein TRV_01774 [Trichophyton verrucosum HKI 0517]
 gi|291188104|gb|EFE43457.1| hypothetical protein TRV_01774 [Trichophyton verrucosum HKI 0517]
          Length = 425

 Score = 93.3 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 44/371 (11%), Positives = 99/371 (26%), Gaps = 68/371 (18%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+ ++D   + +  +         GV                               E++
Sbjct: 53  PFCVMDLGYVHDQYEHWEKTL--PGVTPFY---------------------------ELV 83

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
           L  +        +    K         N         ++    K K      ++ LR   
Sbjct: 84  LA-QGIPAARILFANPCKSPSDITFARNVGVNRLTFDNEAELHKIKQLFPESQLILRCFA 142

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
           S   + + L+           +  +  +S   NV G+ FH     +    F   +++  +
Sbjct: 143 SDPSATYSLSAKFGAHPEASVRLLECAKSLRLNVIGVSFHIGSGARDPNAFEIAIESSRR 202

Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
            F         +  + +GGG   +  +       + L       +V++  EPG       
Sbjct: 203 IFDAGIRIGHSMRLLDIGGGFSESTFEDMAASIQRSLDFHFCDVNVELVAEPGRYFAAGA 262

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT------------ 289
            T+   ++   +  +     + +      +  +Y   ++      P+             
Sbjct: 263 MTIACEIIARRDAKEAPPSAEEASNMLYLNDGVYGTFSSSLFEPSPHPRVLRASGVFYPQ 322

Query: 290 --------AMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVA--------------GY 326
                    ++ G +C   D   +       +  GD + F D+                Y
Sbjct: 323 PAAGDQVKNILWGPTCDGVDCIAKDVELPERLTFGDWLYFPDMGVNYPCFLAFTDLMPAY 382

Query: 327 NINRKNWFNGI 337
           +      FNG 
Sbjct: 383 STCLATGFNGF 393


>gi|298711201|emb|CBJ32423.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 314

 Score = 92.9 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 41/304 (13%), Positives = 81/304 (26%), Gaps = 36/304 (11%)

Query: 96  IIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI 155
           I   ++SQL K  ++A      +G+R NP +        +   P S  G   +   E + 
Sbjct: 5   INACSLSQLRKIAEEA--PGSSVGVRFNPGLGSGGTKSTNVGGPSSSFGIWYEWADEVKE 62

Query: 156 KN----VNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
                 +     H +  + S       +  +  +       +  ++LGGG          
Sbjct: 63  ICAGGDLTVSRIHTHIGSGSDPAVWQKVSGMSLDLVRQFPTVTTLNLGGGYKVGRMSGEQ 122

Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV-------------LDISENIKNL 258
               Q +             E G  +          V             +         
Sbjct: 123 STDLQAIGAPVMGDFEAFAEETGRKLKLEIEPGTFLVANAGSLVCTAQDLVSTGSGGYEF 182

Query: 259 VIVDSSVEAHVPDYLLYQESATIY------PNTGPYTAMVCGRSCLAGDIF--------- 303
           + +D+ +   +   L       +               +V G  C +GD+          
Sbjct: 183 IKLDAGMTELLRPSLYGALHPIVVVPAEGEGGGETAEYVVVGHCCESGDLLTPVSGAASE 242

Query: 304 GEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIAVKNVDGTIKAI-REFSYND 361
            E       +IGD +  E    Y        +N        + +  G +  + R  +   
Sbjct: 243 IERRTLAKAEIGDLVVVEGCGAYVAGMSAKNYNSFPEVPEVLLDSAGELHVVRRRQTLEQ 302

Query: 362 YYNN 365
            + N
Sbjct: 303 IFEN 306


>gi|167840073|ref|ZP_02466757.1| iron-sulfur cluster-binding protein, rieske family/putative
           carboxynorspermidine decarboxylase [Burkholderia
           thailandensis MSMB43]
          Length = 1193

 Score = 92.9 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 9/185 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           + TP ++ D++ L + L     +  ++G +LL  LK F+  G  + +  ++DG  +SS +
Sbjct: 729 LDTPAFVYDERALRDALSAMHALLGDSGCRLLYPLKPFSHAGALECIAPHVDGFAASSPF 788

Query: 62  EVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E           G  H    A  D ++ A++ NCD +  N++SQ  +    A       G
Sbjct: 789 EAAFSRALLGRAGSIHLTTPALSDRDLGAIVDNCDYVALNSLSQWGRL-HAAFAGRLSCG 847

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSFL 173
           LRINP  S       DP RP S+LG        +       ++ + G+ FH NC++  F 
Sbjct: 848 LRINPQYSVVADARYDPCRPHSKLGVPLDAMERAVADDPRALQGLQGIHFHTNCDSPDFW 907

Query: 174 CFSAM 178
                
Sbjct: 908 SACRN 912


>gi|156324878|ref|XP_001618506.1| hypothetical protein NEMVEDRAFT_v1g3350 [Nematostella vectensis]
 gi|156199145|gb|EDO26406.1| predicted protein [Nematostella vectensis]
          Length = 254

 Score = 92.9 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 64/202 (31%), Gaps = 6/202 (2%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   ++       + +    V    A+KC  +  +  TL+    G   +S  E+ L
Sbjct: 40  FYVADLGDIVK--KHVRWFKALPRVTPFYAVKCNDSKAIVKTLSLLGAGFDCASKTEIQL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    K        ++C        S++   K      + K+ LRI  
Sbjct: 98  VQSIGVSSERIIYANPCKQVSQIKYAASCGVEKMTFDSEVELMKVARNHPNAKLVLRIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+       +      ++ +    ++ G+ FH          +   + +   
Sbjct: 158 DDSKAVCRLSVKFGATLKTSRLLLERAKELNVDIIGVSFHVGSGCTDPQTYVQAVSDARC 217

Query: 185 EF---GHFITQIEWISLGGGIH 203
            F         +  + +GGG  
Sbjct: 218 VFDMGAELGFNMHLLDIGGGFP 239


>gi|255324705|ref|ZP_05365819.1| decarboxylase [Corynebacterium tuberculostearicum SK141]
 gi|255298180|gb|EET77483.1| decarboxylase [Corynebacterium tuberculostearicum SK141]
          Length = 462

 Score = 92.9 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 52/419 (12%), Positives = 121/419 (28%), Gaps = 78/419 (18%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P   ++   L +N    L    +  V  ++  A K   A    D       G   +S 
Sbjct: 43  GSPVNALNPAPLRHNAQELLNAGASHDVETQVFFARKANKALCFVDAARDAGLGVDVASE 102

Query: 61  YEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E+    +     E    + A   D  +   +S   TI  ++ ++ ++    A+ L    
Sbjct: 103 NELRQVLDRGVAPERIILSAAIKTDGLLRLAVSRGVTISCDSRAESHRIAAIARDLDTTA 162

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
            +    +          P R   RL    +     +   V G+  H +  +++    +  
Sbjct: 163 RVAPRLAPDPDSLP---PTRFGERLP-AWRQAEWPQELRVVGVHVHLHGYSEADRRTALA 218

Query: 179 LK-NIEKEFGHFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEF-------------- 221
               + +         ++I +GGG+  +        + + +R+                 
Sbjct: 219 EAIALIEHVRALGQPADFIDIGGGVPMSYLESREQWEYYLERIASQRTGTGKPFTWKADP 278

Query: 222 ----------------------------------SEKYSVQIYLEPGEAIVTNTTTLNTT 247
                                               +  + ++LEPG +++     +   
Sbjct: 279 LSNTYPFWQEPTRGQWLDQLLSGEVPGYGTAGTALRERDIALHLEPGRSLLDGCGVILAE 338

Query: 248 VLD----------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSC 297
           V            I   +       ++ +  +   L+         +  P T  V G  C
Sbjct: 339 VSFLKERSDGLPLIGVAMNRTQCRTAADDILLDPLLVPTAGPAKEISREPRTGFVVGAYC 398

Query: 298 LAGDIFGEFH--FEKPVKIGDRISFEDVAGYNI----NRKNWFNGINMPTIAVKNVDGT 350
           +  ++       F   + +GD ++  + AGY +    +  +    I +      + D  
Sbjct: 399 IEDEVILRRELDFPDGIAVGDTLAIPNTAGYFMHILESASHQ---IPLARNVYYDGDDW 454


>gi|146080148|ref|XP_001463945.1| ornithine decarboxylase [Leishmania infantum JPCM5]
 gi|321399074|emb|CBZ08415.1| putative ornithine decarboxylase [Leishmania infantum JPCM5]
          Length = 707

 Score = 92.9 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 83/261 (31%), Gaps = 21/261 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y+ID  +++  +    +  +   V+   A+K      + + L+    G   +S  E+ 
Sbjct: 258 PFYIIDLGRVVEQMARWRH--ELPMVRPYFAVKSNPQPAVLEVLSALGAGFDCASKEEIH 315

Query: 65  LGHE----KFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKIG 119
           +           +    N   +  ++    +     +  +   ++ K        H  I 
Sbjct: 316 MVLGRQLVASPDDIIFANPCKQLGDLREAQACGVTYVTVDNPLEMEKISRLMPSAHAIIR 375

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           ++ N S +   F            G    +        V G+ FH    N     + + +
Sbjct: 376 IKTNDSKAQCSFSTKFGAPLEDVEG--LLEAARQFNVTVCGVSFHVGSGNDDQSAYVSAV 433

Query: 180 KNIEKEFG---HFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEFSEKYS----V 227
           ++  + F     +  +   + +GGG   T+          +   + ++    +      V
Sbjct: 434 RDAYQVFQQAVQYGFKCTILDIGGGFPGTEVVEGSGNTSFEAIARTIRPVLAELFGGGDV 493

Query: 228 QIYLEPGEAIVTNTTTLNTTV 248
            I  EPG      +  L   V
Sbjct: 494 TIISEPGRYFTAASHALLMNV 514



 Score = 64.4 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 20/46 (43%)

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
           + G +C + D   +      +K+GD +   D+  Y      +FNG 
Sbjct: 629 IFGPTCDSMDCILKKQPFPEMKLGDWLLVPDMGSYTTAAAGFFNGF 674


>gi|118378|sp|P27116|DCOR_LEIDO RecName: Full=Ornithine decarboxylase; Short=ODC
 gi|159388|gb|AAA29259.1| ornithine decarboxylase [Leishmania donovani]
          Length = 707

 Score = 92.9 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 83/261 (31%), Gaps = 21/261 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y+ID  +++  +    +  +   V+   A+K      + + L+    G   +S  E+ 
Sbjct: 258 PFYIIDLGRVVEQMARWRH--ELPMVRPYFAVKSNPQPAVLEVLSALGAGFDCASKEEIH 315

Query: 65  LGHE----KFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKIG 119
           +           +    N   +  ++    +     +  +   ++ K        H  I 
Sbjct: 316 MVLGRQLVASPDDIIFANPCKQLGDLREAQACGVTYVTVDNPLEMEKISRLMPSAHAIIR 375

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           ++ N S +   F            G    +        V G+ FH    N     + + +
Sbjct: 376 IKTNDSKAQCSFSTKFGAPLEDVEG--LLEAARQFNVTVCGVSFHVGSGNDDQSAYVSAV 433

Query: 180 KNIEKEFG---HFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEFSEKYS----V 227
           ++  + F     +  +   + +GGG   T+          +   + ++    +      V
Sbjct: 434 RDAYQVFQQAVQYGFKCTILDIGGGFPGTEVVEGSGNTSFEAIARTIRPVLAELFGGGDV 493

Query: 228 QIYLEPGEAIVTNTTTLNTTV 248
            I  EPG      +  L   V
Sbjct: 494 TIISEPGRYFTAASHALLMNV 514



 Score = 64.4 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 20/46 (43%)

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
           + G +C + D   +      +K+GD +   D+  Y      +FNG 
Sbjct: 629 IFGPTCDSMDCILKKQPFPEMKLGDWLLVPDMGSYTTAAAGFFNGF 674


>gi|227818599|ref|YP_002822570.1| LysA, diaminopimelate decarboxylase LysA [Sinorhizobium fredii
           NGR234]
 gi|36958854|gb|AAQ87279.1| Y4yA [Sinorhizobium fredii NGR234]
 gi|227337598|gb|ACP21817.1| putative LysA, diaminopimelate decarboxylase LysA [Sinorhizobium
           fredii NGR234]
          Length = 457

 Score = 92.9 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 55/410 (13%), Positives = 107/410 (26%), Gaps = 66/410 (16%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P  L+    L  NL     +   +  G  +   +K   + G+         G   SSL
Sbjct: 39  GSPLNLVWPDALQKNLAALKGVLTERRVGHAVYYGVKVNKSLGLMRAALSAGAGLDVSSL 98

Query: 61  YEVMLGH--EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E+         G    A   A        ++     I  ++  +L    D         
Sbjct: 99  CELRDARRLGAEGVRLVATGPAKTSAFHKELIDCSALISVDSPEELEDLIDGLPADAGPQ 158

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHN-NCENKSFLCFSA 177
            + +           +    P   +               +GL FH      ++ +   +
Sbjct: 159 PILLRLR--PRDQSKSRFGMPGDAVVHCLARLTAENRLRFDGLHFHLSGYRWETRVAALS 216

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKD----------------------------- 208
              ++  +          I +GGG+     D                             
Sbjct: 217 EAADLITKARRMGFSPRMIDIGGGLPIQYVDQVKYRAHLAAQAPEDYRTGKIPDSFYPYG 276

Query: 209 -------------YPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTT-------- 247
                               Q +  +  +  + + +EPG A+                  
Sbjct: 277 GTLSPADWLHRLLEAEMSQGQSVAGYLAREGLTLAMEPGRALTDQAAITVFRISRVKALG 336

Query: 248 ----VLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF 303
               V+ +  +  +      + E  V   L+          + P  A + G SCL  D+ 
Sbjct: 337 PDSHVIFVEGSSFSACETWFASEFLVDPILVPVTRP--AAQSPPIRAYLAGHSCLDEDVI 394

Query: 304 GEFH--FEKPVKIGDRISFEDVAGYNIN-RKNWFNGINMPTIAVKNVDGT 350
                 F    + GD + + +  GY ++  +N F+   MP       D  
Sbjct: 395 SNRWLTFPIAPQAGDLLVYANTGGYQMDLLENEFHRHPMPARLCVIDDAE 444


>gi|213027179|ref|ZP_03341626.1| putative amino acid decarboxylase [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
          Length = 365

 Score = 92.9 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 62/362 (17%), Positives = 110/362 (30%), Gaps = 56/362 (15%)

Query: 9   IDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67
             + +++ N+             K   A K  +  G+   +        ++S YEV    
Sbjct: 2   FSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQYEVRKCL 61

Query: 68  E-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHK--KIGLRI 122
           E  F G+   +N   K           D   I  +++ +L      ++KL K   + +R+
Sbjct: 62  EIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVANVCVRV 121

Query: 123 NPSVSYSKF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
            P+V  +          A       +  E C+  +     ++ GL  H   +      F+
Sbjct: 122 EPNVPSATHAELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMHVGDQVPESEPFA 181

Query: 177 AMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPV---------------KDFCQR 217
              K +  E          + + I++GGGI    K                   +DF   
Sbjct: 182 KATKVLVDESRRLEEVLGIKFDLINVGGGIPVPYKYDDENGDPLKDNMYAGITAQDFADA 241

Query: 218 LKEFSEKYSVQ--IYLEPGEAIVTNTTTLNTTV----------------LDISENIKNLV 259
           +     K+     I +EPG  +  +   L T V                  +     +  
Sbjct: 242 VIREVHKWRTDVEICIEPGRKVTGSAAVLLTEVSCEKRKTNYDLNGNVECHVEWKFVDAG 301

Query: 260 IVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF------GEFHFEKPVK 313
               S   H  D+  Y  +A+           + G  C  GD F       EF   K   
Sbjct: 302 YSVLSDSQHF-DWFFYVYNASRMTAAHDAWIKLAGPLCDGGDYFHMGVKGEEFLLPKETH 360

Query: 314 IG 315
           +G
Sbjct: 361 VG 362


>gi|331236585|ref|XP_003330951.1| ornithine decarboxylase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309309941|gb|EFP86532.1| ornithine decarboxylase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 525

 Score = 92.5 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 79/267 (29%), Gaps = 6/267 (2%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ D   +            N  V+   A+KC     +   L Q   G   +S  E+ +
Sbjct: 64  FYVCDLAYVYRQYLRWQEALGNR-VEPFFAVKCNPDSLVLKLLAQLGTGFDCASHAEIEM 122

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             +         Y    K              +    +Q    K      + ++ LRI  
Sbjct: 123 VLKLGVEPSRIIYANPCKAGSFVRHAHAKGVQMMTFDNQDELEKVAKFHPNARMVLRILT 182

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S S   L +             ++ +     V G+ FH      + L ++  +   + 
Sbjct: 183 DDSGSLCRLGEKFGAPLENVRGLLERAKELDVAVIGVAFHVGSGCSNPLLYTDAVGRAKW 242

Query: 185 EFG---HFITQIEWISLGGGIHFTD-KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            F          +++ +GGG    +             K F     V++  EPG   VT 
Sbjct: 243 TFELGQELGFHFDFLDVGGGFGDDNFDLLAEGLLVGLDKYFPVGCGVRVIAEPGRYFVTR 302

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEA 267
              L T ++   +          +V A
Sbjct: 303 AFELATNIIARRKAPTPPPSSLVAVTA 329



 Score = 67.1 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 26/75 (34%), Gaps = 7/75 (9%)

Query: 288 YTAMVCGRSCLAGDIFGEFHFEK--PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
               + G SC + D+           + +GD + + ++  Y I   + FNG  +  +   
Sbjct: 444 ELCKIFGPSCDSIDLVSPATLLPTNRLLVGDWLRWPNMGAYTICAASQFNGFKISQVVYT 503

Query: 346 NVD-----GTIKAIR 355
             D          +R
Sbjct: 504 IGDPSVDEKVRHILR 518


>gi|22203509|gb|AAM92262.1| ornithine decarboxylase [Zea mays]
          Length = 339

 Score = 92.5 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/266 (15%), Positives = 80/266 (30%), Gaps = 12/266 (4%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y++D  ++++ +D          V+   A+KC         L         +S  E+ 
Sbjct: 58  PFYVLDLGEVVSLMDQWNVAL--PNVRPFYAVKCNPEPSFLSMLAAMGSNFDCASRAEIE 115

Query: 65  LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                    E   +    K       A     +   +++  ++ K K    K    + ++
Sbjct: 116 YVLSLGISPERIVFANPCKPESDIIFAEKVGVNLTTYDSEDEVYKIKKHHPKCELLLRIK 175

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE----NKSFLCFSA 177
                +    +            E      ++    V+G+ FHN       N      +A
Sbjct: 176 PMNDGNARCPMGPKY-GALPEEIEPLLRIAQASRLTVSGVSFHNGSGDADSNAYLGAIAA 234

Query: 178 MLKNIEKEFGHFITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
             +  E      +++I  + +GGG                   + FS +  + I  EPG 
Sbjct: 235 AKQVFETAAKFGMSKINVLDIGGGFTSGHQFTTAATAVKSALQQHFSNEPELTIIAEPGR 294

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV 261
                  TL TT++            
Sbjct: 295 FFAETAFTLATTIIGKRVRGDLREYW 320


>gi|157865853|ref|XP_001681633.1| ornithine decarboxylase [Leishmania major strain Friedlin]
 gi|68124931|emb|CAJ02515.1| putative ornithine decarboxylase [Leishmania major strain Friedlin]
          Length = 707

 Score = 92.5 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/261 (14%), Positives = 81/261 (31%), Gaps = 21/261 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y+ID  +++  +    +  +   V+   A+K      + + L+    G   +S  E+ 
Sbjct: 258 PFYIIDLGRVVEQMARWRH--ELPMVRPYFAVKSNPQPAVLEVLSALGAGFDCASKEEIH 315

Query: 65  LGHE---KFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +          +   +    K      +A       +  +   ++ K        H  I 
Sbjct: 316 MVLGRHLVASPDDIIFANPCKQLGDLCEAQACGVTYVTVDNPLEMEKIGRLMPSAHVIIR 375

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS---FLCFS 176
           ++ N S +   F            G             V G+ FH    N     +L   
Sbjct: 376 IKTNDSKAQCCFSTKFGAPLEDVDG--LLKVARQLNVAVCGVSFHVGSGNDDQSAYLSAV 433

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEFSEKYS----V 227
               ++ ++   +  +   + +GGG   T+      +   +   + ++    +      V
Sbjct: 434 RDAYHVFQQAAQYGFKCTLLDIGGGFPGTEVVQGSGNTSFEIIARTIRPVLAELFGGGDV 493

Query: 228 QIYLEPGEAIVTNTTTLNTTV 248
            I  EPG      +  L   V
Sbjct: 494 TIISEPGRYFTAASHALLMNV 514



 Score = 64.0 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 20/46 (43%)

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
           + G +C + D   +      +K+GD +   D+  Y      +FNG 
Sbjct: 629 IFGPTCDSMDCILKKQPFPEMKLGDWLLVPDMGSYTTAAAGFFNGF 674


>gi|5360176|gb|AAD42894.1|AF159564_1 ornithine decarboxylase [Leishmania tarentolae]
          Length = 732

 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 68/213 (31%), Gaps = 12/213 (5%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y+ID  +++  +    +  +   V+   A+K      + + L+    G   +S  E+ 
Sbjct: 283 PFYIIDLGRVVEQMARWRH--ELPMVRPYFAVKSNPQAAVLEVLSALGAGFDCASREEIQ 340

Query: 65  LGHE----KFGGETHAYNVAYK-DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +           +    N   +     +A       +  +   ++ K          +  
Sbjct: 341 MVLRNNLVATPDDIIFANPCKQLSDMREAQACGVTYVTVDNPLEMEKISRV--MPSARAI 398

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +RI  + S ++   +          E            V G+ FH    N     + + +
Sbjct: 399 IRIKTNDSKAQCSFSTKFGASLEDVEGLLQVARQFNVAVCGVSFHVGSGNYDESAYVSAV 458

Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDY 209
           ++  + F     +      + +GGG   T+   
Sbjct: 459 RDAYQVFQQAAKYGFHCTILDIGGGFPGTEAVE 491



 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 19/46 (41%)

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
           + G +C + D   +      +K+GD +   D+  Y       FNG 
Sbjct: 654 IFGPTCDSMDCILKKQPFPEMKLGDWLLVPDMGSYTTAAAGVFNGF 699


>gi|253690265|ref|YP_003019455.1| Orn/DAP/Arg decarboxylase 2 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251756843|gb|ACT14919.1| Orn/DAP/Arg decarboxylase 2 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 467

 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 57/421 (13%), Positives = 114/421 (27%), Gaps = 78/421 (18%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P  ++    + NN+     + +      +L    K   + G+         G   SSL
Sbjct: 51  GSPLNIVWPHTVANNIAALRTVLQRHDVDCRLYYGAKVNKSPGLVQAAVNAGVGVDVSSL 110

Query: 61  YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E+         G    A   A     + A++ +   I+ ++  + ++    A  L    
Sbjct: 111 QELKDALRAGCDGARLCATGPAKTREFLMALVHHRALIVLDSPEEFDEVLALADVLRVTE 170

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK--------IESEIKNVNGLMFHNNCENK 170
            +R+                  SR G    +         I  +   + G  FH      
Sbjct: 171 PVRVLLR-------YRPSFAQASRFGMLADEAARCLETLSIRQDAFRLEGFHFHLGGYEP 223

Query: 171 SFLCFSAMLKNI-EKEFGHFITQIEWISLGGGIHFTD----------------------- 206
                +        ++      Q   I +GGG+                           
Sbjct: 224 DTRVAALSEVLPLLEQARAKGLQPAIIDIGGGLPIQYLPASRYQDYLAKQNGADYRHGQV 283

Query: 207 --KDYPVKDFCQR----------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248
               YP    C                  + E  +++ + + +EPG ++   +      V
Sbjct: 284 PTSFYPYGGECSATDYLEAFLSASIGDTRVAEVLKQHGLILAIEPGRSLADQSAITVFRV 343

Query: 249 LDISENIKNLVIVD------------SSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRS 296
                      +V              + E  +    ++           P  A + G S
Sbjct: 344 TRTRRQPDGNHVVFVEGSSFSACETWFNSEFLIDPLHVFS--VKKDTPPTPGKAWIAGHS 401

Query: 297 CLAGDIFGEFH--FEKPVKIGDRISFEDVAGYNINRKNW-FNGINMPTIAVKNVDGTIKA 353
           CL  D+       F    + GD + + + AGY ++     F+   +P           + 
Sbjct: 402 CLDDDVITNRLIHFRTVPQPGDLLIYANTAGYQMDLLENAFHRHPLPARLCAFKGKKGEL 461

Query: 354 I 354
           I
Sbjct: 462 I 462


>gi|331011410|gb|EGH91466.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2
           [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 213

 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 56/191 (29%), Gaps = 10/191 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+ +ID   +    D      +    K+  A+K   A  + + L         +S+YE
Sbjct: 25  ETPFVVIDTAIISKAYDDLRAGFEF--AKVYYAVKANPAVEVINLLKDKGSSFDIASIYE 82

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +        G E  +Y    K  +               ++ + L      A      + 
Sbjct: 83  LDKVMSCGVGPERISYGNTIKKSKDIRYFYEKGVRLFATDSEADLRNIAKAAPGAKVYVR 142

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSA 177
           +        +        +   +        I +    +   G+ FH   + +    + A
Sbjct: 143 ILTE---GSTTADWPLSRKFGCQTDMAMDLLILARDLGLVPYGISFHVGSQQRDISVWDA 199

Query: 178 MLKNIEKEFGH 188
            +  ++  F  
Sbjct: 200 AIAKVKVIFER 210


>gi|149528855|ref|XP_001516497.1| PREDICTED: hypothetical protein, partial [Ornithorhynchus anatinus]
          Length = 344

 Score = 92.1 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/263 (15%), Positives = 81/263 (30%), Gaps = 12/263 (4%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++       +++    V+   A+KC  + G+  TL +   G   +S  E+ L
Sbjct: 42  FFVADLGDVVR--KHLRFLKALPRVQPFYAVKCNGSRGVVKTLAELGTGFDCASKKEIEL 99

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                  G    Y    K        +     +    +++   K   +    ++ L I  
Sbjct: 100 VQSIGVPGHKIIYANPCKQISHIKYAARHGVQVMTFDNEVELAKVAKRYPGARMVLSIAT 159

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
               S   L        +      +  +     V G+ FH          F+  + +   
Sbjct: 160 DEFKSPAHLNIKFGATLKSCRHLLETAKKMNVEVIGISFHVGSACCDPQAFTQAIADARL 219

Query: 185 EF---GHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
            F        ++  + LGGG    +      ++            F E   V+I  EPG 
Sbjct: 220 VFEMGAELGYRMHLLDLGGGFPGPENSTVRFEELASVINSALDLYFPEGCGVEIIAEPGR 279

Query: 236 AIVTNTTTLNTTVLDISENIKNL 258
             V ++ TL   ++         
Sbjct: 280 YYVASSFTLAVNIIAKEHIPSEH 302


>gi|123416580|ref|XP_001304924.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain
           containing protein [Trichomonas vaginalis G3]
 gi|121886409|gb|EAX91994.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain
           containing protein [Trichomonas vaginalis G3]
          Length = 192

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 62/175 (35%), Gaps = 6/175 (3%)

Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR---LKEFSEKYSVQ 228
           F      + ++ + +      ++ + +GGG+  +  +  +    ++   +         +
Sbjct: 7   FEKLVLFIHDLLELYRSKGINVKILDVGGGLGVSYTNPNLLPDFEKYFKIFSSLSPKVEE 66

Query: 229 IYLEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSSVEAHVPDYLLYQES--ATIYPNT 285
           I+ E G +I+    +L T +L I +   +N  IVD  +   +   L         +    
Sbjct: 67  IHFELGRSIICQCGSLVTKLLYIKQGMERNFAIVDGGMTELIRPALYNAFHLVENVTHPG 126

Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
             Y   V G  C + D+          K GD +       Y  +  + +   ++P
Sbjct: 127 NDYEFDVVGPVCESSDVIAHSVKMGDAKRGDYVIIRSAGAYGESMASSYLCRDIP 181


>gi|1401268|gb|AAB65826.1| ornithine decarboxylase [Nicotiana tabacum]
          Length = 245

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 70/219 (31%), Gaps = 20/219 (9%)

Query: 145 EKCKDKIESEIKNVNGLMFHNNCE----NKSFLCFSAMLKNIEKEFGHFITQIEWISLGG 200
           +      ++    V+G+ FH        N      +A  +  E      ++++  + +GG
Sbjct: 18  DPLLRAAQAARLTVSGVSFHIGSGDADSNAYLGAIAAAKEVFETAAKLGMSKMTVLDVGG 77

Query: 201 GI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
           G           V       + F ++  + I  EPG        TL TT++      +  
Sbjct: 78  GFTSGHQFTTAAVAVKSALKQHFDDEPELTIIAEPGRFFAETAFTLATTIIGKRVRGELR 137

Query: 259 VIV-----DSSVEAHVPDYLLYQESA---------TIYPNTGPYTAMVCGRSCLAGDIFG 304
                     S+   + D+     +               +  +   V G +C A D   
Sbjct: 138 EYWINDGLYGSMNCVLYDHATVNATPLAVLSNRSNVTCGGSKTFPTTVFGPTCDALDTVL 197

Query: 305 EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343
             +    +++ D + F ++  Y     + FNG N   I 
Sbjct: 198 RDYQLPELQVNDWLVFPNMGAYTKAAGSNFNGFNTSAIV 236


>gi|322489360|emb|CBZ24619.1| putative ornithine decarboxylase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 717

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/261 (14%), Positives = 78/261 (29%), Gaps = 21/261 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y+ID  +++  +    +  +   V+   A+K      + + L+    G   +S  E+ 
Sbjct: 267 PFYMIDLGRIVEQMARWRH--ELPMVRPYFAVKSNPKPAVMEVLSALGAGFDCASKEEIH 324

Query: 65  LGHE---KFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +          +   +    K      +A       +  +   ++ K           I 
Sbjct: 325 MVLGRHLVASPDDIIFANPCKQFGDLCEAQACGVTYVTVDNPLEMEKIGRLMPSARAIIR 384

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +  N S +   F            G             V+G+ FH    N     + + +
Sbjct: 385 ITTNDSKAQCSFSTKFGAPLEDVEG--LLQAARQYNVTVHGVSFHVGSGNDDHSAYVSAV 442

Query: 180 KNIEKEF---GHFITQIEWISLGGGIHFTDKDY-----PVKDFCQRLKEFSEKYS----V 227
           ++    F     +      + +GGG   TD          +   + ++    +      V
Sbjct: 443 RDAYHVFQQAAQYGFNCTLLDIGGGFPGTDIVEGSGNTSFEAIARAIRPILVELFGGGDV 502

Query: 228 QIYLEPGEAIVTNTTTLNTTV 248
            I  EPG      +  L   V
Sbjct: 503 TIISEPGRYFTAASHALLMNV 523



 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 19/46 (41%)

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
           + G +C + D   +      +K+GD +   D+  Y       FNG 
Sbjct: 638 IFGPTCDSMDCILKKRPFPEMKLGDWLLVPDMGSYTTAAAGVFNGF 683


>gi|227832186|ref|YP_002833893.1| putative diaminopimelate decarboxylase [Corynebacterium aurimucosum
           ATCC 700975]
 gi|262183962|ref|ZP_06043383.1| putative diaminopimelate decarboxylase [Corynebacterium aurimucosum
           ATCC 700975]
 gi|227453202|gb|ACP31955.1| putative diaminopimelate decarboxylase [Corynebacterium aurimucosum
           ATCC 700975]
          Length = 462

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 51/418 (12%), Positives = 107/418 (25%), Gaps = 70/418 (16%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P  ++    L  N    L    + GV  ++  A K   A    D   +   G   +S 
Sbjct: 42  GSPVNVLHPAPLGRNAQELLDAGASHGVDTQVFFARKANKALCFVDAAREAGLGVDVASE 101

Query: 61  YEVMLGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA----QKL 114
            E+          E    + A   D  +   +    TI  ++ ++  +    A       
Sbjct: 102 NELRQVLNRGVAPERIILSAAIKTDALLRLAIDRGVTISCDSRAEAERIAALAKALNHTA 161

Query: 115 HKKIGLRINPSVSYSK------FILADPNRPFSRLGE-----------------KCKDKI 151
           H    L  NP                    P +   +                   +   
Sbjct: 162 HVAPRLAPNPDNLPPTRFGELLHAWQSHAWPETIHADGVHVHLHGYSESDRRTALAEAIA 221

Query: 152 ESEIKNVNGL-----MFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGG-IHFT 205
             E   + G                           E+         E  +     +  T
Sbjct: 222 LIEHLRLVGQPASFIDIGGGVPMSYLESREQWEYFQERIAAQRAGTGEPFTWKSDPLSNT 281

Query: 206 DKDYPVKDFCQRLKE--------------FSEKYSVQIYLEPGEAIVTNTTTLNTTVLD- 250
              +      + L                   + ++ ++LEPG +++     +   V   
Sbjct: 282 YPFWQTPTRGEWLNHLLSGEVAGFGPAGRALSERNISLHLEPGRSLLDGCGIILAEVSFL 341

Query: 251 ---------ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGD 301
                    I   +       ++ +  +   L+         +  P T  V G  C+  +
Sbjct: 342 KERSDGLPLIGAAMNRTQCRTAADDILLDPLLVPTAGERGAVDREPRTGFVVGAYCIEDE 401

Query: 302 IFGEFH--FEKPVKIGDRISFEDVAGYNI----NRKNWFNGINMPTIAVKNVDGTIKA 353
           +       F + + +GD ++  + AGY +    +  +    I +      + DG    
Sbjct: 402 VILRRELDFPEGIAVGDTLAIPNTAGYFMHILESASHQ---IPLARNVYLDADGRDWV 456


>gi|295115564|emb|CBL36411.1| Diaminopimelate decarboxylase [butyrate-producing bacterium SM4/1]
          Length = 99

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
            +   + G  C   D F        + +GD +   D   +  +    +NG       +  
Sbjct: 9   DHKYDITGSLCENNDKFAIDRMLPKIDLGDLLVIHDTGAHGFSMGYNYNGKLRSAELLLR 68

Query: 347 VDGTIKAIRE-FSYNDYYN 364
            DG+I+ IR   +  DYY 
Sbjct: 69  EDGSIQMIRRAETPRDYYA 87


>gi|260911530|ref|ZP_05918117.1| carboxynorspermidine decarboxylase [Prevotella sp. oral taxon 472
           str. F0295]
 gi|260634364|gb|EEX52467.1| carboxynorspermidine decarboxylase [Prevotella sp. oral taxon 472
           str. F0295]
          Length = 118

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/106 (33%), Positives = 60/106 (56%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +++P Y++++ KL  NL     +   A V+++LA K FA W  F    +Y+  TT+SSL 
Sbjct: 11  VRSPMYIVEEAKLRRNLQLIASVATRADVEIILAFKAFALWKTFPIFKEYIRSTTASSLS 70

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF 107
           E  L  E+FG   H Y+ AY D EI  + +    + FN+++Q  ++
Sbjct: 71  EAKLAFEEFGSRAHTYSPAYTDDEIGEIANCSSHLTFNSLTQYERY 116


>gi|290958498|ref|YP_003489680.1| decarboxylase [Streptomyces scabiei 87.22]
 gi|260648024|emb|CBG71132.1| putative decarboxylase [Streptomyces scabiei 87.22]
          Length = 374

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 48/357 (13%), Positives = 112/357 (31%), Gaps = 24/357 (6%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH- 67
           ++  ++ + ++ A     +  +++  A+K      + D +     G ++ S  E+ L   
Sbjct: 2   VELDRIADGVNLAREA--HPRIRVTYAVKASYHRPILDAVRAAGAGVSAFSEMEMALART 59

Query: 68  EKFGGETHAYNVAYKDCEIDAV-LSNCDTIIFNTVSQLNKFKD--KAQKLHKKIGLRI-- 122
            KF      YN   ++    A  +    T+   ++++L       +A     +IG R+  
Sbjct: 60  AKFAPYDIVYNGVGREGADLATAVDAGVTVNLESLAELRGLLHARRADASAGRIGFRVNG 119

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC----ENKSFLCFSAM 178
                                     D +      + G+ FH+                +
Sbjct: 120 CVPGESDTLGKYGVLGISVAQLPTVADLLRGSGLVLGGVSFHHLANRLDGTAHLDTLDRL 179

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEKYSVQIYLEPGE 235
           +  +    GH    +++I +GGG+    +       + F                LE G 
Sbjct: 180 IPALAPLSGHPAVALDYIDVGGGLASRLEVGDESAVEMFRALADRIDADLDCTTILELGR 239

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAM 291
            +V +  +L + V+D+  +   +V +  +   ++     ++        +          
Sbjct: 240 FLVADAESLLSRVVDMRTSGGVMVAILDATTNYLIPAPGHRFRVERLEPLAQGETRTPVR 299

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVD 348
              R    G    E     P++ G  +   +   Y    K  F    +P ++    D
Sbjct: 300 FVDRL---GSTICEN-HCGPLRPGTLVGVLNAGAYAGVMKEHF-VYPLPDVSFVRDD 351


>gi|289674139|ref|ZP_06495029.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2
           [Pseudomonas syringae pv. syringae FF5]
          Length = 243

 Score = 91.4 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 77/225 (34%), Gaps = 21/225 (9%)

Query: 2   IKT-PY--YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
           ++T P   ++ D   L  ++   +     AGV+L  A+K  +   M +TL   + G   S
Sbjct: 18  LETDPLAAFVYDLDALQQHVSEVMAALP-AGVELYYAIKANSEALMLETLAPLVSGFEIS 76

Query: 59  SLYEVMLGHEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
           S  E+         + + ++     D ++ + L +    I   +++++ + +  A++  +
Sbjct: 77  SGGEIERVMACPTRKPYVFSGPGKLDSDLRSALLHKVEAIHLESLNEIARLQQLAEQAGR 136

Query: 117 KIGLRINPSVS---------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
              + +  +                        + L E  +    +    + G   H   
Sbjct: 137 VQPVFLRINPQLPAAQSSRLAMAGTATPFGIDEADLAEAVRRVDNASHLTLKGFHVHAMS 196

Query: 168 ENKSFLCFSAMLKNIEKEFGHFIT------QIEWISLGGGIHFTD 206
              S      +L    + +  +        Q+   ++GGGI    
Sbjct: 197 HQMSVERHEQLLDFYLQRWQEWKALARDPGQLTHFNVGGGIGVDY 241


>gi|158312520|ref|YP_001505028.1| diaminopimelate decarboxylase [Frankia sp. EAN1pec]
 gi|158107925|gb|ABW10122.1| Diaminopimelate decarboxylase [Frankia sp. EAN1pec]
          Length = 453

 Score = 91.4 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 56/415 (13%), Positives = 105/415 (25%), Gaps = 76/415 (18%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTL---------------NQY 51
           YL                  +   +LL A+K  A   + D L                  
Sbjct: 40  YLYSPAVAAARAAELRRHLPD-WAELLFAVKANAFPPILDALLAGTASTDAGTAAGAGAG 98

Query: 52  MDGTTSSSLYEVMLGHEKF-----------------GGETHAYNVAYKDCEIDAVLSN-- 92
           +DG   SS +E++L                      GG     +   K   +   L    
Sbjct: 99  IDGFEVSSAHELVLAAAAVERARQRGAVRAAGQHPSGGARLVASGPGKSVSLLRALLGAV 158

Query: 93  --------CDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILA-DPNRPFSRL 143
                    D +   +  +L +    A +  ++  + +  + +      +       +  
Sbjct: 159 PVEGAVPAVDVVNAESPLELRRIDAVAAETGRRAAVALRVNPARVGLSGSLRMGGRPTAF 218

Query: 144 GEKCKD-------KIESEIKNVNGLMFHNNCENK----SFLCFSAMLKNIEKEFGHFITQ 192
           G + +D              ++ G   H    N             L    ++       
Sbjct: 219 GIQERDVPAAVELARSLPWIDLVGFHVHAVSGNLDATAHLDYVRWCLDFAVRQARLGDVD 278

Query: 193 IEWISLGGGIHFTDKD-------YPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLN 245
           +  + +GGG+    +        + +  F   L +      V++  EPG A+V +     
Sbjct: 279 LRVVDVGGGLGVPFEPDRLGERPFDLDVFGAGLDQLRPPTGVRVVFEPGRALVADCGWYA 338

Query: 246 TTVLDISENIKNLVIVDSSVEAH--VPDYLLYQESATIYPNT-----------GPYTAMV 292
             V D+         V      H  +P       +  + P                   V
Sbjct: 339 AEVTDVKLVHGGAFAVLRGGIHHFQLPTSWEIVHNFAVVPRDDWLPGWPRPEVAAGPVTV 398

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGINMPTIAVKN 346
            G  C   D          ++ GD + F     Y        F G       V +
Sbjct: 399 VGELCTPEDTLARDVTVDRLRAGDVVVFPMAGAYGYEFAMHEFLGHPRAHRVVVD 453


>gi|225387838|ref|ZP_03757602.1| hypothetical protein CLOSTASPAR_01608 [Clostridium asparagiforme
           DSM 15981]
 gi|225046055|gb|EEG56301.1| hypothetical protein CLOSTASPAR_01608 [Clostridium asparagiforme
           DSM 15981]
          Length = 94

 Score = 91.4 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 27/78 (34%), Gaps = 1/78 (1%)

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
            +   V G  C   D F        V  GD +   D   +       +NG       +  
Sbjct: 5   DHMYDVVGSLCENNDKFAIDRMLPKVDKGDLLVIHDTGAHGFAMGYNYNGKLKSAELLLK 64

Query: 347 VDGTIKAIRE-FSYNDYY 363
            DG+++ IR   +  DY+
Sbjct: 65  EDGSVQMIRRAETPKDYF 82


>gi|296393673|ref|YP_003658557.1| Orn/DAP/Arg decarboxylase 2 [Segniliparus rotundus DSM 44985]
 gi|296180820|gb|ADG97726.1| Orn/DAP/Arg decarboxylase 2 [Segniliparus rotundus DSM 44985]
          Length = 396

 Score = 91.0 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 44/345 (12%), Positives = 94/345 (27%), Gaps = 35/345 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            T   ++D+ ++  +             ++  + +   A  +   L +        S  E
Sbjct: 50  GTACDIVDEAEVRAHATAYQAAL--PNGEIAYSSRALLAPAIASWLAEEGLSLDVGSADE 107

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           + +     F         A K  E  A       +   +V   ++    A ++ K   + 
Sbjct: 108 LAVALRGGFPASRIIAGGAVKTREELAAALAAG-VGRISVDTFDELAWLASRIEKPQQIL 166

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +   +S  +   A      S   E        +   V GL  H    +      + +L  
Sbjct: 167 LRVGLSE-ELEQAFGFPLSSLAEEAWLRAHRQKNLRVVGLHCHVGSGS-HEQALAVLLDF 224

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           +E        + + ++LGGG+                 E + +   ++ +EPG+ +V   
Sbjct: 225 LEHMRSAHGLEAQQLNLGGGVSVETAQ-------ALAVERAAQPLPRLIVEPGQGVVGQA 277

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGD 301
            T    V+  +                     +                 V  R  LA D
Sbjct: 278 GTRLVRVIAKNFGTSGEPCAHVDG-----PLPISGAVPPSCTGADLDEVRVVNRHSLAAD 332

Query: 302 I-----------------FGEFHFEKPVKIGDRISFEDVAGYNIN 329
           +                          ++ GD ++F     Y+  
Sbjct: 333 VPTRLLSRPRAESHGPADAARVPLPADLRAGDLLAFPGCGAYHHA 377


>gi|56118620|ref|NP_001007944.1| antizyme inhibitor 1 [Xenopus (Silurana) tropicalis]
 gi|51513230|gb|AAH80451.1| oazin protein [Xenopus (Silurana) tropicalis]
 gi|89270945|emb|CAJ81895.1| antizyme inhibitor 1 [Xenopus (Silurana) tropicalis]
          Length = 442

 Score = 91.0 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 106/346 (30%), Gaps = 29/346 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  K++        I           ++C ++  + + L     G   ++  E+ L
Sbjct: 40  FFVADLGKIVKKHFKWKNIMGRVN--PFYTVRCNSSPAVLEILAALSMGFACANKNEMSL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
            ++     E   Y    K        +     +    S+    K      + K+ L I  
Sbjct: 98  VYDLGIPMENAVYTNPCKQASQIKHAAKIGVNLMTCDSETELKKIARNHFNAKLLLHIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS--FLCFSAMLKNI 182
                +  +        +      +  +     V G+ FH +  N    ++   +  + +
Sbjct: 158 EGISGEEDMNMTFGTTLKNCRHLLECAKELSVEVVGVKFHVSSSNNPQTYIHALSDARCV 217

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIVTN 240
                    ++  + +GG      +   +      L    F E    +I  EPG   V++
Sbjct: 218 FDMAEELGFKMNILDIGGISENEAQLEELYQAVSPLLDVYFPEGSGTRIIAEPGSFYVSS 277

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY------------------ 282
             TL   V+  +    +  +  +  +       +Y  +  +Y                  
Sbjct: 278 AFTLAVNVMAKNVIEHDQHLPSAGKQISNKPAFIYCMNEGVYGSFARKLSEKLNTAPEVH 337

Query: 283 ----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
                +   + + + G S    D+  E      +++GD + FE++ 
Sbjct: 338 KKYKDDEPLFASSLLGPSYDELDVIVEHCLLPELEVGDWVVFENMG 383


>gi|170290124|ref|YP_001736940.1| Orn/DAP/Arg decarboxylase 2 [Candidatus Korarchaeum cryptofilum
           OPF8]
 gi|170174204|gb|ACB07257.1| Orn/DAP/Arg decarboxylase 2 [Candidatus Korarchaeum cryptofilum
           OPF8]
          Length = 344

 Score = 91.0 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 66/346 (19%), Positives = 131/346 (37%), Gaps = 25/346 (7%)

Query: 14  LLNNLDTALYIRKNAGVK-LLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGG 72
           L   +    Y    +    L  + K      +++ L +       SS+       E+  G
Sbjct: 6   LSRRVALRQYSIARSYCDALAYSYKTNP--HIWEVLKETDSMVGVSSI----ASMERVEG 59

Query: 73  ETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSK 130
           E   Y +  +  +  +          I +   +L KF    ++  +K+ L I   +    
Sbjct: 60  ERAVYYLQGEREDEISYLLDRGVRWFIVDNEPELGKFIKVVERRGEKVNLFIRIKMREHT 119

Query: 131 --FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH 188
                        R   +  ++I S++ +  G+ FH   +N   +   ++ +++ +    
Sbjct: 120 IYTGKHFVYGIDWRKVPRIMEEIRSDLIDQLGIHFHRKTQN---VGEWSLKEDVSEALAD 176

Query: 189 FITQIEWISLGGGIHFTD-----KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243
            + +I+WI++GGGI         +   V      LKEF     +++ +EPG  I   +  
Sbjct: 177 SLERIDWINIGGGIPVKYANSKPEVEAVLREIGELKEFLNSRGIKLMMEPGRFIAAPSVA 236

Query: 244 LNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-YTAMVCGRSCLAGDI 302
           L   VL++ E    L    S   A++  YLL      +    G  +  ++ GRS  + DI
Sbjct: 237 LEAEVLNVYEGNVILDC--SIFNAYMDTYLLNIRLPVLGELEGGGFRYLLKGRSPDSLDI 294

Query: 303 FGEFHFE-KPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
           F    +  + +K GD++ F +   YN      FN +    + + + 
Sbjct: 295 FRYSVYLDRELKPGDKVIFLNAGAYNF--HTEFNDMPKIRVEIVDD 338


>gi|15858869|gb|AAL08052.1| ornithine decarboxylase-like protein variant 3 [Homo sapiens]
 gi|119627874|gb|EAX07469.1| arginine decarboxylase, isoform CRA_a [Homo sapiens]
          Length = 362

 Score = 90.6 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 85/255 (33%), Gaps = 12/255 (4%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++       +++    V+   A+KC ++ G+   L Q   G + ++  E+ L
Sbjct: 41  FFVADLGAIVR--KHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 98

Query: 66  G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             H              K        +     + +  +++   K        K+ L I  
Sbjct: 99  VQHIGIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKMVLCIAT 158

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S+S   L+       +      +  +     V G+ FH          ++  + +   
Sbjct: 159 DDSHSLSCLSLKFGVSLKSCRHLLENAKKHHVEVVGVSFHIGSGCPDPQAYAQSIADARL 218

Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPGE 235
            F        ++  + LGGG   T+      +    +        F E   V I+ E G 
Sbjct: 219 VFEMGTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEGCGVDIFAELGR 278

Query: 236 AIVTNTTTLNTTVLD 250
             VT+  T+  +++ 
Sbjct: 279 YYVTSAFTVAVSIIA 293


>gi|260829307|ref|XP_002609603.1| hypothetical protein BRAFLDRAFT_87824 [Branchiostoma floridae]
 gi|229294965|gb|EEN65613.1| hypothetical protein BRAFLDRAFT_87824 [Branchiostoma floridae]
          Length = 259

 Score = 90.6 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 72/253 (28%), Gaps = 42/253 (16%)

Query: 135 DPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG---HFIT 191
                      K  +       +V G+ FH          F+  +++  + F     +  
Sbjct: 1   MKFGCHPSQAPKLLEVAAQLDLSVVGVSFHVGSGCLEASAFARGVESARRIFNIADQYGF 60

Query: 192 QIEWISLGGGIHFTDKD-YPVKDFCQRLKEFSEKYSVQ-----IYLEPGEAIVTNTTTLN 245
             + + +GGG    +       +    L    +++        I  EPG   V +  T+ 
Sbjct: 61  DFDMLDIGGGFPGQESAAISFDEIVADLGPALDEHFPPASGVRIIAEPGRYFVASAFTVA 120

Query: 246 TTVLDISE-------------------------------NIKNLVIVDSSVEAHVPDYLL 274
             ++                                          V  S    + D+  
Sbjct: 121 VNIVAKRMVARDIQEFKDEEAEDAVMNSVAPSMCEEPAFMYYVNDGVYGSFNCLLYDHAA 180

Query: 275 YQESATIYPNTGP--YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
              S     +     ++  V G +C   D   E      +++GD I FED+  Y +   +
Sbjct: 181 VTPSLMRDVDKEEALFSTSVWGPTCDGLDRIMEHCLLPELQVGDWILFEDMGAYTMAAAS 240

Query: 333 WFNGINMPTIAVK 345
            FNG + P+    
Sbjct: 241 TFNGFSKPSCYYV 253


>gi|320037813|gb|EFW19750.1| pyridoxal-dependent decarboxylase [Coccidioides posadasii str.
           Silveira]
          Length = 396

 Score = 90.6 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 83/305 (27%), Gaps = 35/305 (11%)

Query: 69  KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-QKLHKKIGLRINPSVS 127
                   Y   +K  +          +        ++ +  A    + ++ LR+     
Sbjct: 8   GVEPHRILYAAPFKSEDGILYAKQHG-VTQTMFDTEDELRKLADYFPNAELYLRLWADDP 66

Query: 128 YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF- 186
            S+  L           ++     +     V GL FH       F  +   +    + + 
Sbjct: 67  SSRVRLGSKYGVQLPQAKELLVLAQELNMKVIGLCFHVGSSAADFDAYRQAIAFTREVYD 126

Query: 187 ------GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS-EKYSVQIYLEPGEAIVT 239
                       I  I +GGG    + +       + ++++  ++  ++   EPG     
Sbjct: 127 FNQSLREDQRHPIRTIDIGGGFSLGNFESAATVIRKSIRQYFGDEKHLRWVAEPGRYFAE 186

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSV-----EAHVPDYLLYQE----------------- 277
               L   VL           + +       + H+ D + +                   
Sbjct: 187 EAFYLVCRVLGTRPRACLGNGIGADEKLPVGDIHINDGIYHNFLNALTEQVVPQPILLNC 246

Query: 278 --SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWF 334
             +  +          V G++C + D            K+GD + F  +  Y     + F
Sbjct: 247 TGTPYVSAADNGDPYTVWGQTCDSFDKIATNCVLPRRAKVGDWLCFPFMGAYTHVTGSDF 306

Query: 335 NGINM 339
           NG   
Sbjct: 307 NGFPR 311


>gi|329935163|ref|ZP_08285154.1| lysine/ornithine decarboxylase [Streptomyces griseoaurantiacus
           M045]
 gi|329305232|gb|EGG49090.1| lysine/ornithine decarboxylase [Streptomyces griseoaurantiacus
           M045]
          Length = 455

 Score = 90.2 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 59/399 (14%), Positives = 117/399 (29%), Gaps = 61/399 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           P++L+  ++   N      +   AGV  ++  A K   A    D       G   +   E
Sbjct: 45  PFHLLLPERFDANAAAFEGVLHEAGVEGRVYYAKKANKAAVWMDRCALSGRGVDVAGAGE 104

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGL 120
           +         GE        K  ++  V       I  + + +L     +A+   +   +
Sbjct: 105 LRDALGHGVRGEHLVVTGPAKAGDLLRVAVLQGCLIAVDALDELENVLAQARTAARPARV 164

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
            +              +    +     +     +   V G  FH        L  SA  +
Sbjct: 165 LLRRLPPAQPHSRFGLDGGELKTAL-ARCAQARDAVVVEGFSFHL-SGYDPSLRASAAGE 222

Query: 181 NIEKEF--GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV----------- 227
            +E          + + IS+GGG            +   L+E   ++             
Sbjct: 223 LVELCLKARAMGHRADRISIGGGFAVDY--TDAGHWEAFLREQRPEHYHAGRSFDPADFY 280

Query: 228 ------------------------------QIYLEPGEAIVTNTTTLNTTVLDISENIKN 257
                                         Q+ LEPG A++         V  + +    
Sbjct: 281 PYHSPVAGAAALRAVLAADGLAGRLREAGVQLLLEPGRALLDRAGCTVFRVQGVKDRDGY 340

Query: 258 LVIVDSSVEAHVPDYLLYQES-------ATIYPNTGPYTAMVCGRSCLAGDI--FGEFHF 308
            ++        + +     E            P+  PY A V G +CL  D+  + +  F
Sbjct: 341 GIVTVDGSSLSLSEQWFDSEYLPDPVLLPRHEPHGEPYAACVGGATCLESDMVSWRKVRF 400

Query: 309 EKPVKIGDRISFEDVAGYNINRK-NWFNGINMPTIAVKN 346
            +     D + + + AGY ++   + F+ + +P   V +
Sbjct: 401 PRRPAADDLLVYPNTAGYQMDSNESPFHELPLPPKVVLD 439


>gi|317506305|ref|ZP_07964119.1| pyridoxal-dependent decarboxylase [Segniliparus rugosus ATCC
           BAA-974]
 gi|316255399|gb|EFV14655.1| pyridoxal-dependent decarboxylase [Segniliparus rugosus ATCC
           BAA-974]
          Length = 454

 Score = 90.2 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 49/407 (12%), Positives = 107/407 (26%), Gaps = 63/407 (15%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           ++++       NL     +     ++  +  A K   +      + +   G   +SL E 
Sbjct: 32  FHVVHPPTFARNLADFQAVFTEFEIEGLVYFAKKANKSTAWLRAVAEAGAGVDVASLGEF 91

Query: 64  MLGH-EKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKF-------------- 107
                    GE       A  D  +   + +   I  + +S+L +               
Sbjct: 92  RSALGHGVRGEKLVVTGPAKSDELLWLAVRHGALIAVDELSELERAIAFGSQEQPVRVLL 151

Query: 108 ------------------KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD 149
                             +  A       G  +            DP     + G    +
Sbjct: 152 RAVAAEQPDTRFGMSGPERKAAVHRCADAGAAVRMEGFSLHLSGYDPLARAVKAGRLAVE 211

Query: 150 KIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFT---- 205
             ++    +                     +  + E G      +    GG   +     
Sbjct: 212 IGQARALGLPADTISIGGGFAVDYVRQEDWEAFQAETGPSQFHAKKEFPGGFYPYHSPVS 271

Query: 206 ------------DKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE 253
                                   + E      +++ +EPG A++ +       V     
Sbjct: 272 GAGALAEVLTSRYGSEGPDLREATIAEALRAKGIKLAVEPGRALLADAGVSVFEVQGFKW 331

Query: 254 NIKNLVIVDSSVEAHV-----PDYLLYQESATIYPNTGPY---TAMVCGRSCLAGDIFGE 305
                  + +     +          +     ++P  G      + V G SCL  D+   
Sbjct: 332 REHLQYGIATVAGTSLSLSEQWFASEFLPEPRLWPEGGAQQRTPSAVGGTSCLDSDMLTW 391

Query: 306 FH--FEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPTIAVKNVDG 349
                 +P K GD + + + AGY ++   + F+ + +P   V ++ G
Sbjct: 392 RKLPLPRPPKRGDFLVYPNTAGYQMDSNESAFHELPIPKKVVLDLTG 438


>gi|50123034|ref|YP_052201.1| putative lysine/ornithine decarboxylase [Pectobacterium
           atrosepticum SCRI1043]
 gi|49613560|emb|CAG77011.1| putative lysine/ornithine decarboxylase [Pectobacterium
           atrosepticum SCRI1043]
          Length = 467

 Score = 90.2 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 54/421 (12%), Positives = 110/421 (26%), Gaps = 78/421 (18%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P  ++    + NN+     + +      +L    K   + G+         G   SSL
Sbjct: 51  GSPLNIVWPHTVTNNIAALRTVLQRHDVDCRLYYGAKVNKSPGLVQAAVNAGIGVDVSSL 110

Query: 61  YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E+         G    A   A     +  ++ +   I+ ++  + +     A  L    
Sbjct: 111 QELKDALRAGCDGARLCATGPAKTREFLTELVHHRALIVLDSPEEFDDVLALAALLRVTK 170

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCENK 170
            +R+                  SR G    +               ++ G  FH      
Sbjct: 171 PVRVLLR-------YRPSFAQASRFGMLADEVARCLETLSTRQDVLHLEGFHFHLGGYAP 223

Query: 171 SFLCFSAMLKNI-EKEFGHFITQIEWISLGGGIHFTD----------------------- 206
                +        +       Q   I +GGG+                           
Sbjct: 224 DTRVAALAEVLPLLERARSRGLQPTMIDIGGGLPIQYLSASRYQAYLAEQNEADYRHGQV 283

Query: 207 --KDYPVKDFC----------------QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248
               YP                       +    +++ + + +EPG ++   +      V
Sbjct: 284 PTSFYPYGGERSAADYLEAFLSASIGQHCVANILKQHGLILAIEPGRSLADQSAITVFRV 343

Query: 249 LDISENIKNLVIVD------------SSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRS 296
                      +V              + E  +    ++       P  G   A + G S
Sbjct: 344 TRTRRQPDGNHVVFVEGSSFSACETWFNSEFLIDPLHVFSVKKDTRPTPGK--AWIAGHS 401

Query: 297 CLAGDIFGEFH--FEKPVKIGDRISFEDVAGYNINRKNW-FNGINMPTIAVKNVDGTIKA 353
           CL  D+       F+   + GD + + + AGY ++     F+   +P           + 
Sbjct: 402 CLDDDVITNRLIHFQTVPQPGDLLIYANTAGYQMDLLENAFHRHPLPARLCAFKGKKGEL 461

Query: 354 I 354
           I
Sbjct: 462 I 462


>gi|23379713|gb|AAM76599.1| ornithine decarboxylase 1 [Pan troglodytes]
          Length = 200

 Score = 89.8 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 60/198 (30%), Gaps = 6/198 (3%)

Query: 10  DKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE- 68
           D   +L       +++    V    A+KC  +  +  TL     G   +S  E+ L    
Sbjct: 2   DLGDILK--KHLRWLKALPRVTPFYAVKCNDSKAIVKTLAAIGTGFDCASKTEIQLVQSL 59

Query: 69  KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY 128
               E   Y    K        +N    +    S++   K        K+ LRI    S 
Sbjct: 60  GVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIATDDSK 119

Query: 129 SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF-- 186
           +   L+       R      ++ +    +V G+ FH          F   + +    F  
Sbjct: 120 AVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARCVFDM 179

Query: 187 -GHFITQIEWISLGGGIH 203
                  +  + +GGG  
Sbjct: 180 GAEVGFSMYLLDIGGGFP 197


>gi|325929653|gb|ADZ45335.1| pyridoxal-dependent decarboxylase [Streptomyces sp. NRRL 30471]
          Length = 388

 Score = 89.8 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 51/344 (14%), Positives = 116/344 (33%), Gaps = 26/344 (7%)

Query: 3   KTPYYLIDKQKLLNNLDTAL---YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           +TP  + D   +   +        +    G +LL ++K   +  +   L     G   SS
Sbjct: 33  ETPTIVHDPDGIDAEITAIRHGLSLLHVPGSRLLFSVKANRSRAVLTHLASRNIGAAVSS 92

Query: 60  LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + E     E      +A +      ++  +  +   +  +++ QL      A   H + G
Sbjct: 93  VAEDRAAAEAGMSPRYATSPGLSGADLIELHKSGTHLDIDSIDQLA-----AVPRHSETG 147

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDK---------IESEIKNVNGLMFHNNCENK 170
           LR++  +         P    SR G + +D          ++     V  L  H   +  
Sbjct: 148 LRLSVPIPRESTARDMPW---SRFGIRWEDAGERGKAQAVLKERKLRVVRLHAHV-RDIG 203

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGG----IHFTDKDYPVKDFCQRLKEFSEKYS 226
                  + + +       + +++ +++GGG     H   +       C   +       
Sbjct: 204 GVEDVRPLGRALAH-AARDLPEVDEVNIGGGMIRLFHHNQEAIAPVFECLAEELARAGRP 262

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286
           +++  EPG  +VT+   L T VL +  +     +   +   ++  +  +  + T      
Sbjct: 263 LRVLAEPGAQLVTSHGYLITRVLSVRRHEGRQSVTVDASAWNLAGWSRFHLAMTGADRGE 322

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
            +T  + G +C   D++        ++ GD +       Y  + 
Sbjct: 323 RWTTDLTGPTCYEKDLWFAGMATDRIEPGDLVVLRGAGAYVGSM 366


>gi|324504368|gb|ADY41886.1| Ornithine decarboxylase [Ascaris suum]
          Length = 510

 Score = 89.8 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 57/396 (14%), Positives = 114/396 (28%), Gaps = 53/396 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYEV 63
           P+Y++D  +L N L+          V+   +L+C A   +   L +  D G   ++  E+
Sbjct: 69  PFYVMDMGRLENLLNAWREHMPR--VQPFYSLRCNADPVLLRLLVEQPDVGFCCTNRVEL 126

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
            +  E  G E   Y                   +    S+ +  +  A      + LR+ 
Sbjct: 127 NMAVELAGRERVLYANPLWTRGSVRHAREMGIELLLFESREDLLRMHAAYPEASLVLRVC 186

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
            +   S+  +           E            V G+ F       S   ++  +    
Sbjct: 187 MNAPVSEGSMRVGCELMGEAPELLSMAA-DLGVKVVGISFSIGAGACSLGIYAYAIAQAC 245

Query: 184 KEF---GHFITQIEWISLGGGIHFTDKD--YPVKDFCQRLKEFSEKY-------SVQIYL 231
           + F         +  + +GGG                  +    ++Y        V+I  
Sbjct: 246 RLFGVAASLGHDLCVLDIGGGFPCGSPTRGPSFSQVAATISASLDEYFPESSFGHVRIIA 305

Query: 232 EPGEAIVTNTTTLNTTVLDIS------------------ENIKNLVIVDSSVEAHVPDYL 273
           EPG     +  +L T ++D                       +       S    +  + 
Sbjct: 306 EPGRYFAASVFSLITNIIDKRAVDASVVTNDVFDSGTAGFVYQTNEGFFGSFGCRLTAFC 365

Query: 274 LYQESATIYPNT----GPYTA-MVCGRSCLAG-DIFGEFHFEKPVKIGDRISFEDVAGYN 327
             +    +          YT   + G +     DI         ++IG+ + ++D+  Y+
Sbjct: 366 EPKCRPLVECVHDVSADNYTYATILGPTLSNNVDIVQPVARLPQMQIGEWLLWDDMGAYS 425

Query: 328 INRKNWFN-------GINMPTI-AVKNVDGTIKAIR 355
           +      N       G   PTI    + +      R
Sbjct: 426 MG-----NRETLGEDGQPSPTIYYFVDDERWQHMSR 456


>gi|218659898|ref|ZP_03515828.1| diaminopimelate decarboxylase protein [Rhizobium etli IE4771]
          Length = 156

 Score = 89.4 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 20/151 (13%), Positives = 40/151 (26%), Gaps = 12/151 (7%)

Query: 32  LLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDC--EIDA 88
           +  A+K  +   +  TL +   G    S  E+              ++   K       A
Sbjct: 5   VCYAMKANSNQAVLKTLGRLGAGIDVVSEGELRRALAADIPASRIMFSGVGKTPSEMDFA 64

Query: 89  VLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEK 146
           + +        +  +L     +A        +  RINP V           +  ++ G  
Sbjct: 65  LEAGIYCFNVESEPELEILNQRAVSAGKKAPVSFRINPDVDAKTHSKISTGKKENKFGIS 124

Query: 147 CKDKIESEIKN-------VNGLMFHNNCENK 170
            +                V G+  H   +  
Sbjct: 125 WERARAIYAHAAKLPGIEVTGIDMHIGSQIT 155


>gi|312082719|ref|XP_003143560.1| pyridoxal-dependent decarboxylase [Loa loa]
 gi|307761276|gb|EFO20510.1| pyridoxal-dependent decarboxylase [Loa loa]
          Length = 480

 Score = 89.4 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 45/356 (12%), Positives = 97/356 (27%), Gaps = 35/356 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTL-NQYMDGTTSSSLYEV 63
           P+++++ + + + L+     +K   VK   AL+C     +   L      G   S+ YEV
Sbjct: 57  PFFVMNVELVDDILENW--FKKMPDVKPYYALRCNPDNILLKLLTRNTDMGLCCSNRYEV 114

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
            +  +    +   Y               C        ++ +  +         I LR+ 
Sbjct: 115 EMAMKIVNVDRIIYGNPLWTRGSIRHAKECGIQTVIIETEDDLKRFTTYYPEVSIILRVT 174

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
                      + N             I+     + G+         +   +   +    
Sbjct: 175 MDRKLVSDPFTEDNF-DVEKAVSLLRTIKDSSVKIKGVSLSVRSICTTPTMYLYAIAQCR 233

Query: 184 KEFG---HFITQIEWISLGGGIHFTDKDYPVKDFC---------QRLKEFSEKYSVQIYL 231
           + F        +++ + +G G         +                        ++I  
Sbjct: 234 RLFDTGLEVGHKMDVLDVGDGFPSMSATDGISFDQIAKSLQVALALFFPSKLFKDIKIIA 293

Query: 232 EPGEAIVTNTTTLNTTVLD------------------ISENIKNLVIVDSSVEAHVPDYL 273
           EPG     +T +L T V+D                  +    +       +    +    
Sbjct: 294 EPGPYFAASTFSLITRVIDKRLIDGSFLTNDESDAGTVGYVYQINEGFYGAFGCKLSTRR 353

Query: 274 LYQESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
               S  +       T   + G      DI        P+++GD + + D+  Y I
Sbjct: 354 NPICSPLMIFGEKMNTYAAIIGPEPCDTDIVLPLTRLPPLQVGDWLIWHDMGAYTI 409


>gi|23379717|gb|AAM76601.1| ornithine decarboxylase 1 [Pongo pygmaeus]
          Length = 200

 Score = 89.0 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 59/198 (29%), Gaps = 6/198 (3%)

Query: 10  DKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE- 68
           D   +L       ++     V    A+KC  +  +  TL     G   +S  E+ L    
Sbjct: 2   DLGDILK--KHLRWLXAVPRVTPFYAVKCNDSKAIVKTLAAVGTGFDCASKTEIQLVQSL 59

Query: 69  KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY 128
               E   Y    K        +N    +    S++   K        K+ LRI    S 
Sbjct: 60  GVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIATDDSK 119

Query: 129 SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF-- 186
           +   L+       R      ++ +    +V G+ FH          F   + +    F  
Sbjct: 120 AVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARCVFDM 179

Query: 187 -GHFITQIEWISLGGGIH 203
                  +  + +GGG  
Sbjct: 180 GAEVGFSMYLLDIGGGFP 197


>gi|227329050|ref|ZP_03833074.1| putative lysine/ornithine decarboxylase [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 467

 Score = 88.7 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 55/421 (13%), Positives = 113/421 (26%), Gaps = 78/421 (18%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P  ++    + NN+     + ++     +L    K   + G+         G   SSL
Sbjct: 51  GSPLNIVWPHTVANNIAALRTVLQHHDVDCRLYYGAKVNKSPGLVQAAVNAGVGVDVSSL 110

Query: 61  YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E+         G    A   A     +  ++ +   I+ ++  + ++    A+ L    
Sbjct: 111 QELKDALRAGCDGARLCATGPAKTREFLTELVHHRALIVLDSPEEFDEVLALAELLRATE 170

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCENK 170
            +R+                  SR G    +               ++ G  FH      
Sbjct: 171 PVRVLLR-------YRPSFAQNSRFGMLADEVAICLETLSTRQDALHLEGFHFHLGGYEP 223

Query: 171 SFLCFSAMLKNI-EKEFGHFITQIEWISLGGGIHFTD----------------------- 206
                +        +       +   I +GGG+                           
Sbjct: 224 DTRVAALAEVLPLLERARSKGLEPAIIDIGGGLPIQYLSASRYQEYLAKQNEADYRHGQV 283

Query: 207 --KDYPVKDFC----------------QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248
               YP                      R+ +  + Y + + +EPG ++   +      V
Sbjct: 284 PTSFYPYGGERSAADYLDAFLSASIGQNRVADVLKHYGLILAIEPGRSLADQSAITVFRV 343

Query: 249 LDISENIKNLVIVD------------SSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRS 296
                      +V              + E  +    ++       P  G   A + G S
Sbjct: 344 TRTRRQPDGNHVVFVEGSSFSACETWFNSEFLIDPLHVFSVKKDTRPTPGK--AWIAGHS 401

Query: 297 CLAGDIFGEFH--FEKPVKIGDRISFEDVAGYNINRKNW-FNGINMPTIAVKNVDGTIKA 353
           CL  D+       F    + GD + + + AGY ++     F+   +P           + 
Sbjct: 402 CLDDDVITNRLIHFRTVPQPGDLLIYVNTAGYQMDLLENAFHRHPLPARLCAFKGKKGEL 461

Query: 354 I 354
           I
Sbjct: 462 I 462


>gi|21780334|gb|AAM77684.1|AF521192_1 ornithine decarboxylase [Capsicum annuum]
          Length = 335

 Score = 88.7 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/266 (14%), Positives = 81/266 (30%), Gaps = 12/266 (4%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y++D  ++++ +D          V+   A+KC         L         +S  E+ 
Sbjct: 54  PFYVLDLGEVVSLMDQWNVAL--PNVRPFYAVKCNPEPSFLSMLAAMGSNFDCASRAEIE 111

Query: 65  LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                    E   +    K       A     +   +++  ++ K K    +    + ++
Sbjct: 112 YVLSLGISPERIVFANPRKPESDIIFAEKVGVNLTTYDSEDEVYKIKKHHPRCELLLRIK 171

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE---NKSFLCFSAM 178
                +    +         +  E      ++    V+G+ FH       + ++L   A 
Sbjct: 172 PMNDGNARCPMGPKY-GALPKEIEPLLRIAQASRLTVSGVSFHIGSGDADSNAYLGAIAA 230

Query: 179 LKNIEKEFGHFIT-QIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
            K + K    F   ++  + +G G                   + FS +  + I  EPG 
Sbjct: 231 AKQVFKTAAKFGMSKVNVLDVGDGFTSGHQFTTAATAVKSALQQHFSNEPELTIIAEPGR 290

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIV 261
                  TL TT++            
Sbjct: 291 FFAETAFTLATTIIGKRVRGDLREYW 316


>gi|23379719|gb|AAM76602.1| ornithine decarboxylase 1 [Macaca sp.]
          Length = 200

 Score = 88.7 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 60/198 (30%), Gaps = 6/198 (3%)

Query: 10  DKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE- 68
           D   +L       +++    V    A+KC  +  +  TL     G   +S  E+ L    
Sbjct: 2   DLGDILK--KHLRWLKALPRVTPFYAVKCNDSKAIVKTLAAVGTGFDCASKTEIQLVQNL 59

Query: 69  KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY 128
               E   Y    K        +N    +    S++   K        K+ LRI    S 
Sbjct: 60  GVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVTRAHPKAKLVLRIATDDSK 119

Query: 129 SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF-- 186
           +   L+       R      ++ +    +V G+ FH          F   + +    F  
Sbjct: 120 AVCRLSVKFGATLRNSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARCVFDM 179

Query: 187 -GHFITQIEWISLGGGIH 203
                  +  + +GGG  
Sbjct: 180 GAEVGFSMYLLDIGGGFP 197


>gi|308233662|ref|ZP_07664399.1| diaminopimelate decarboxylase [Atopobium vaginae DSM 15829]
 gi|328943708|ref|ZP_08241173.1| hypothetical protein HMPREF0091_10398 [Atopobium vaginae DSM 15829]
 gi|327491677|gb|EGF23451.1| hypothetical protein HMPREF0091_10398 [Atopobium vaginae DSM 15829]
          Length = 443

 Score = 88.3 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 55/419 (13%), Positives = 113/419 (26%), Gaps = 69/419 (16%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP Y++D+Q     L+    I   + + L  ++K                     S  E+
Sbjct: 15  TPTYVLDEQAFKQRLEHVKKIMGTS-IDLCYSIKANPFLS--KAAQACGFKLEVCSPGEL 71

Query: 64  MLGHE-KFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            +        +   Y+   K  D    A+          +V Q    + +A KL K+  L
Sbjct: 72  EICKRLHVDPKAIVYSGVCKQTDDIQAALRYGVGVCTAESVLQALLIEREAAKLDKQGLL 131

Query: 121 RINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
             +P     +             L     ++      +  G+ +    + K        L
Sbjct: 132 SKSPVRVLLRLNAGSQFGMCQDDLEHLINNRAHFMHCSFVGIHYFVGTQRKKLTHQEKEL 191

Query: 180 KNIEKEFG----HFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSEK--YSVQI 229
             +E         +  + + +  G G+ +               + L    ++    V +
Sbjct: 192 VRLEALIDELESKYNWKCQRLEYGPGLAYPYFIDQDASDTLLPAKELAPALQRIANRVPL 251

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ----ESATIYPNT 285
            +E G    +   T  T ++DI                      L Q    +  +I   +
Sbjct: 252 TVEMGRFFASECGTYLTRIVDIKHGQDTKTNYAFIDGGINHVSYLGQMMGLKCPSIINVS 311

Query: 286 GPYTAMVCGRSCL----------------------------------------------A 299
                 +   +C                                                
Sbjct: 312 QQQATCLDVSTCEDEAQQKLALSTQAQSKLEEPQPFAQADESEGGRYTSSWTLCGSLCTT 371

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIAVKNVDGTIKAIREF 357
            D+    +    + + D ++F+ +  Y+I      F   +MP I V+   G  +  R+F
Sbjct: 372 SDVLVREYE-SSLGLNDILAFQHIGAYSITEAMYLFLSRDMPRIVVRKAHGVYELARDF 429


>gi|213421572|ref|ZP_03354638.1| putative amino acid decarboxylase [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
          Length = 183

 Score = 88.3 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 38/101 (37%), Gaps = 7/101 (6%)

Query: 271 DYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF------GEFHFEKPVKIGDRISFEDVA 324
           D+  Y  +A+           + G  C  GD F       EF   K   +GD ++F D  
Sbjct: 79  DWFFYVYNASRMTAAHDAWIKLAGPLCDGGDYFHMGVKGEEFLLPKETHVGDIVAFLDAG 138

Query: 325 GYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364
            Y I  +  +N      + + + +G  + IR   SY D   
Sbjct: 139 AYTIESQTVYNNRPRTGVVMIDKNGETRLIRREDSYEDMVK 179


>gi|23379721|gb|AAM76603.1| ornithine decarboxylase 1 [Saguinus oedipus]
          Length = 200

 Score = 88.3 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 61/198 (30%), Gaps = 6/198 (3%)

Query: 10  DKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE- 68
           D   +L       +++    V    A+KC  +  + +TL     G   +S  E+ L    
Sbjct: 2   DLGDILK--KHLRWLKALPRVTPFYAVKCNDSRAIVNTLAAIGTGFDCASKTEIQLVQSL 59

Query: 69  KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY 128
               E   Y    K        +N    +    S++   K        K+ LRI    S 
Sbjct: 60  GVPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIATDDSK 119

Query: 129 SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF-- 186
           +   L+       +      ++ +    +V G+ FH          F   + +    F  
Sbjct: 120 AICRLSVKFGATLKTSRLLLERAKELNIDVIGVSFHVGSGCTDPETFVQAITDARCVFDM 179

Query: 187 -GHFITQIEWISLGGGIH 203
                  +  + +GGG  
Sbjct: 180 GAEVGFSMYLLDIGGGFP 197


>gi|119175426|ref|XP_001239945.1| hypothetical protein CIMG_09566 [Coccidioides immitis RS]
          Length = 396

 Score = 88.3 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 83/305 (27%), Gaps = 35/305 (11%)

Query: 69  KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-QKLHKKIGLRINPSVS 127
                   Y   +K  +          +        ++ +  A    + ++ LR+     
Sbjct: 8   GVEPHRILYAAPFKSEDGILYAKEHG-VTQTMFDTEDELRKLADYFPNAELYLRLWADDP 66

Query: 128 YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF- 186
            S+  L           ++     +     V GL FH       F  +   +    + + 
Sbjct: 67  SSRVRLGSKYGVQLPQAKELLVLAQELNMKVIGLCFHVGSSAADFDAYRQAIAFTREVYD 126

Query: 187 ------GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS-EKYSVQIYLEPGEAIVT 239
                       I  I +GGG    + +         ++++  ++  ++ + EPG     
Sbjct: 127 FNQSLREDQRHPIRTIDIGGGFSLGNFESAATAIRTSIRQYFGDEKHLRWFAEPGRYFAE 186

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSV-----EAHVPDYLLYQE----------------- 277
               L   VL           + +       + H+ D + +                   
Sbjct: 187 EAFYLVCRVLGTRPRACLGNGIGADEKLPVGDIHINDGIYHNFLNALTEQVVPQPILLDC 246

Query: 278 --SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRISFEDVAGYNINRKNWF 334
             +  +          V G++C + D            K+GD + F  +  Y     + F
Sbjct: 247 TGTPYVSAADNGDPYTVWGQTCDSFDKIATNCVLPRRAKVGDWLCFPFMGAYTHVTGSDF 306

Query: 335 NGINM 339
           NG   
Sbjct: 307 NGFPK 311


>gi|148252222|ref|YP_001236807.1| putative ornithine/diaminopimelate PLP dependent decarboxylase
           [Bradyrhizobium sp. BTAi1]
 gi|146404395|gb|ABQ32901.1| Putative Ornithine/Diaminopimelate PLP Dependent decarboxylase
           [Bradyrhizobium sp. BTAi1]
          Length = 456

 Score = 87.9 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 58/411 (14%), Positives = 120/411 (29%), Gaps = 60/411 (14%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P +LI  ++L +N+ +   + +++GV   +    K   +  +         G   SSL
Sbjct: 40  GSPTHLIWPEELQSNIASLKCVLQDSGVAHAIYYGAKANKSPALLAAALGAGAGIDVSSL 99

Query: 61  YEVMLGHE-KFGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           YE+         G        A        +++    I  ++  +L+          ++ 
Sbjct: 100 YELREARRVGADGAQIVATGPAKTAAFHRELIAANALISVDSPEELDDLIGSLPSDEREP 159

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHN-NCENKSFLCFSA 177
              +   +       +    P + +        +     ++GL FH    +  S      
Sbjct: 160 VCPVLLRLRPHSQAQSRFGMPAAAIRRCLARIADERRLRLDGLHFHLGGYDWPSRAQAID 219

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD------------------------ 213
            +  +  E          I +GGG+     D+ V                          
Sbjct: 220 EVAGLIGECRARGFSPRMIDIGGGLPAQYVDHDVYQAHLAAQAPEDYRTREVPASFYPYG 279

Query: 214 ------------------FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI 255
                               + + ++     + + +EPG A+  +       V  +    
Sbjct: 280 GRLSAATWLRCLLRAPLADGRSIADYLTDEGLVLAMEPGRALADHAALSVFRVTRVKALA 339

Query: 256 KNLVI------VDSSVEAHVPDYLLYQESATIYP----NTGPYTAMVCGRSCLAGDIFGE 305
            +  +        S+ E       L                P  A + G SCL  D+   
Sbjct: 340 CDAHVLFVEGSSFSACETWFRSEFLVDPILIPRDARPAGAPPIRAYLAGHSCLDDDVLSN 399

Query: 306 FH--FEKPVKIGDRISFEDVAGYNIN-RKNWFNGINMPTIAVKNVDGTIKA 353
               F    + GD + + + AGY ++  +N F+   MP       DG  + 
Sbjct: 400 RWLTFPVAPQAGDLLVYANTAGYQMDLLENQFHRHPMPNRLCVAQDGKGQL 450


>gi|227505167|ref|ZP_03935216.1| possible decarboxylase [Corynebacterium striatum ATCC 6940]
 gi|227198240|gb|EEI78288.1| possible decarboxylase [Corynebacterium striatum ATCC 6940]
          Length = 470

 Score = 87.9 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 50/384 (13%), Positives = 103/384 (26%), Gaps = 60/384 (15%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P  ++D + L  N    +      GV  ++  A K   A            G   +SL
Sbjct: 53  GSPVNVLDPRPLARNAAELVDAGTALGVDTRVFFARKANKALAFVGAARAAGHGVDVASL 112

Query: 61  YEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E+           +         +  +   +     I  ++  +L +            
Sbjct: 113 NELRQVLAVGVPPKDVILSAAIKDERLLRTAVKAGVVISCDSRDELARIAALGTPARIAP 172

Query: 119 GLRINPSVSYSK------------------------FILADPNRPFSRLG-------EKC 147
            L  +P+V                              L        RL         + 
Sbjct: 173 RLAPDPTVLPPTRFGERLDVWRSIDWPDTVEAVGVHVHLHGYAESDRRLALAEAITLVEA 232

Query: 148 KDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWIS--LGGGIHFT 205
                     ++               +      IE++         W +  L     F 
Sbjct: 233 LRAAGHPASFIDIGGGVPMSYLLHETQWEQYRDRIERQRAGTGEPFTWKNDPLTNTYPFW 292

Query: 206 DKDYPVKDFCQRLKEF----------SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI 255
                 + F Q LK              ++S+ ++LEPG +++     +   V  + E  
Sbjct: 293 QTPTRGEWFTQLLKGKVSGYGTAATALREHSIALHLEPGRSLLDGCGMILAEVSFLKERS 352

Query: 256 ---------KNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEF 306
                     N     ++ +  + D  L   +  +     P T  + G  C+  ++    
Sbjct: 353 DGLPLIGLAMNRTQCRTAADDLLLDPFLVPTAGEVER--APRTGFLVGAYCIEDEVILRR 410

Query: 307 H--FEKPVKIGDRISFEDVAGYNI 328
              F   + +GD ++  + AGY +
Sbjct: 411 ALDFPDGIAVGDTLAIPNTAGYFM 434


>gi|47212507|emb|CAF93729.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 444

 Score = 87.9 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/364 (11%), Positives = 102/364 (28%), Gaps = 44/364 (12%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++              ++   +++C ++  + D L     G   ++  E+ L
Sbjct: 40  FFVADLGVVMRQHVRWRTHMAQ--IRPYYSVRCNSSPTVIDVLAALGTGFICTNKTELEL 97

Query: 66  G-HEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                   E   ++           A  +  D ++ +   +L K           + + +
Sbjct: 98  VQRRGVPPEDIIFSGVSKQLSQMKYAAKNGVDLLVCDNEVELCKISRCHPNAKYVLIVIL 157

Query: 123 NPSVSYS----KFILADPNRPFSRLGEKCKDKIE------SEIKNVNGLMFHNNCENKSF 172
              +          ++  N      G   KD              V G+ FH     +  
Sbjct: 158 TLVLMLLLQVATEAISPDNGMAMTFGCSLKDCRHLLERAKELGVQVVGVRFHIPGSCEDS 217

Query: 173 LCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC--QRLKEFSEKYSV 227
             +   + +    F         ++ + +GGG +  +    + +      +  +    S 
Sbjct: 218 QVYVHAVSDARCVFDMGEEIGFSMKILDIGGGFNGCETQLELVNNAVVSMVDLYFPPSSG 277

Query: 228 QIYL-EPGEAIVTNTTTLNTTVLDISENIKNLVIV-DSSVEAHVPDYLLY---------- 275
              + EPG   V++  TL   V+      ++ +         +      Y          
Sbjct: 278 VCIIAEPGSFFVSSAFTLAVNVISKEMVARDSLDQAHDEPSPNDEPAFQYYMKEGVYGSF 337

Query: 276 ------------QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323
                               N   +++ + G S    D   E      + IGD + F   
Sbjct: 338 ASKLCEDQIFVPSVHKNTCLNAAVFSSSLRGPSGDDMDQVVEHCLLPELDIGDWLIFSQA 397

Query: 324 AGYN 327
             Y+
Sbjct: 398 GAYS 401


>gi|227112172|ref|ZP_03825828.1| putative lysine/ornithine decarboxylase [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 467

 Score = 87.9 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 52/414 (12%), Positives = 111/414 (26%), Gaps = 64/414 (15%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P  ++    + NN+     + +      +L    K   + G+         G   SSL
Sbjct: 51  GSPLNIVWPHTVANNIAALRTVLQRHDVDCRLYYGAKVNKSPGLVQAAVNAGVGVDVSSL 110

Query: 61  YEVMLGH--EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E+         G    A   A     + A++ +   I+ ++  + ++    A  L    
Sbjct: 111 QELKDALRAGGDGARLCATGPAKTREFLTALVHHRALIVLDSPEEFDEVLALADLLRVTD 170

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK-IESEIKNVNGLMFHNNCENKSFLCFSA 177
            +R+      S    +        +    +       + ++ G  FH           + 
Sbjct: 171 PVRVLLRYRPSFAQASRFGMLADEVAICLEALSTRQAVLHLEGFHFHLGGYEPDTRVAAF 230

Query: 178 MLKNI-EKEFGHFITQIEWISLGGGIHFTD-------------------------KDYPV 211
                  +       Q   I +GGG+                               YP 
Sbjct: 231 AEVLPLLERARSKGLQPAIIDIGGGLPIQYLSASRYQDYLAKQNAADYRHGQVPTSFYPY 290

Query: 212 KDFCQRLKE----------------FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI 255
                 +                    +++ + + +EPG ++   +      V       
Sbjct: 291 GGERSAVDYLEAFLSASIGQNRVADVLKQHGLILAIEPGRSLADQSAITVFRVTRTRRQP 350

Query: 256 KNLVIVD------------SSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF 303
               +V              + E  +    ++          G   A + G SCL  D+ 
Sbjct: 351 DGNHVVFVEGSSFSACETWFNSEFLIDPLHVFSVKKDTPLVPGK--AWIAGHSCLDDDVI 408

Query: 304 GEFH--FEKPVKIGDRISFEDVAGYNINRKNW-FNGINMPTIAVKNVDGTIKAI 354
                 F    + GD + + + AGY ++     F+   +P           + I
Sbjct: 409 TNRLIHFRTVPQSGDLLIYANTAGYQMDLLENAFHRHPLPARLCAFKGKKGELI 462


>gi|160420255|ref|NP_001087651.1| MGC81763 protein [Xenopus laevis]
 gi|51895808|gb|AAH81043.1| MGC81763 protein [Xenopus laevis]
          Length = 442

 Score = 87.5 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 45/346 (13%), Positives = 105/346 (30%), Gaps = 29/346 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  K++        I     +K    ++C ++  + + L     G   ++  E+ L
Sbjct: 40  FFVADLGKIVKKHFKWKNIMG--HIKPFYTVRCNSSPAVLEILAALGMGFACANKNEMSL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
            ++     E   Y    K        +     +    S+    K     L+ K+ L +  
Sbjct: 98  VYDLGISMENVVYTNPCKQASQIKHAAKIGVNLMTCDSETELKKIARNHLNAKLLLHVAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHN--NCENKSFLCFSAMLKNI 182
                +  ++       +      D  +     V G+ FH   +   +++    +  + +
Sbjct: 158 EGMSGEEEMSMTFGTTLKNCRHLLDCAKELSVEVVGVKFHVSNSSNQQTYNHALSDARCV 217

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIVTN 240
                    ++  + +GG      +   +      L    F E    +I  EPG   V++
Sbjct: 218 FDMAEELGFKMNILDIGGIPENEAQLEELYQAVGPLLDVYFPEGSGTRIIAEPGSFYVSS 277

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ----------------------ES 278
             TL   V+       +  +  +          +Y                         
Sbjct: 278 AFTLAVNVIAKETIEHDHHLSSAGKPISNKLAFVYCLNEGVYGSFARKLFEKLDTTPEVH 337

Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324
                    +T+ + G S    D+  +      +++GD I FE++ 
Sbjct: 338 KKYKDGEPLFTSSLLGASYDELDVIVDHCVLPELEVGDWIVFENMG 383


>gi|242001342|ref|XP_002435314.1| ornithine decarboxylase, putative [Ixodes scapularis]
 gi|215498644|gb|EEC08138.1| ornithine decarboxylase, putative [Ixodes scapularis]
          Length = 391

 Score = 87.5 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 55/369 (14%), Positives = 115/369 (31%), Gaps = 54/369 (14%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY---- 61
           +++ D   L + +                         +     + +     S  Y    
Sbjct: 30  FFICDLNDLESKVKLWRREL----------------PRVTPFFGERLSLFCLSKRYRLSF 73

Query: 62  -------EVMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA 111
                  E+    +     E   Y            A       + F++V +L K K   
Sbjct: 74  SFLFFQNELEAVLDIGVSPERILYASPVKCSSHLKFASERGVTLMAFDSVEELAKIK--- 130

Query: 112 QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS 171
              + ++ LR++   + ++          +   E   +      + V G++FH    +  
Sbjct: 131 -DENARLLLRVDVVDNTNEVSTLTKFGTSAHEVEGVLNLAFKMGRRVVGILFHVKSAHHD 189

Query: 172 FLCFSAMLKNIEKEFG---HFITQIEWISLGGG-IHFTDKDYPVKDFCQRLKEFSEKYSV 227
              F+  +K+ +  F        Q+  +S+GGG +  T         C+ ++   + +  
Sbjct: 190 PDTFTLAVKHAKTAFDIGTRLGFQMTVLSIGGGFLGGTRMQDSFLKVCEAIRSAIDIHFP 249

Query: 228 Q-----IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV---------PDYL 273
                 I  EPG+ +VT+  +L   VL   +    +      ++  +             
Sbjct: 250 PSEGLEIIAEPGQFLVTSAYSLVVKVLHKRKRSAKIGGERGCLQTGIEVGRLTKLCRPAF 309

Query: 274 LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW 333
            Y +     P        V G SC  GD          + IG+ +  +++  Y + R + 
Sbjct: 310 RYVQPPFDRPL--DVLTTVWGSSCHPGDCVIAGELLFDMSIGEWLLIDNMGAYAVARASG 367

Query: 334 FNGINMPTI 342
           FNG   P +
Sbjct: 368 FNGHGFPPV 376


>gi|23379715|gb|AAM76600.1| ornithine decarboxylase 1 [Gorilla gorilla]
          Length = 200

 Score = 87.5 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 59/198 (29%), Gaps = 6/198 (3%)

Query: 10  DKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE- 68
           D   +L       +++    V    A+KC  +  +  TL     G   +S  E+ L    
Sbjct: 2   DLGDILK--KHLRWLKALPRVTPFYAVKCNDSKAIVKTLAAIGTGFDCASKTEIQLVQSL 59

Query: 69  KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY 128
                   Y    K        +N    +    S++   K        K+ LRI    S 
Sbjct: 60  GVPPVRIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIATDDSK 119

Query: 129 SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF-- 186
           +   L+       R      ++ +    +V G+ FH          F   + +    F  
Sbjct: 120 AVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARCVFDM 179

Query: 187 -GHFITQIEWISLGGGIH 203
                  +  + +GGG  
Sbjct: 180 GAEVGFSMYLLDIGGGFP 197


>gi|325303748|tpg|DAA34383.1| TPA_inf: ornithine decarboxylase [Amblyomma variegatum]
          Length = 308

 Score = 87.5 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 47/272 (17%), Positives = 89/272 (32%), Gaps = 16/272 (5%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P++++D   ++  +       K   V+   A+KC     + + L     G   +S  E+ 
Sbjct: 29  PFFVVDVGDIVYKVKLWK--LKIPRVEPFYAVKCNGDPAVLELLAGLGLGFDCASKAEID 86

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                        Y    K             D + F+   +L+K +         + LR
Sbjct: 87  TVRAVGVASNRIIYANPCKTRSYIKHAAAVGVDLMTFDNELELHKVRGLYPAARLVLRLR 146

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           ++ + S     L           +       S   NV G+ FH    ++    F+  +++
Sbjct: 147 VDDTGSVC--RLGVKFGCELADAQHLLSVARSLGLNVVGVSFHVGSNSREPQTFARAIED 204

Query: 182 IEKEFGH---FITQIEWISLGGGIHFTDKDY------PVKDFCQRLKEFSEKYSVQIYLE 232
             + F         +  + +GGG                       + F E+  V+I  E
Sbjct: 205 ARQVFDQGLAMGFPMTLLDIGGGYPGDRGFQKLFDQIAHTINSSLAEHFPEESGVRIISE 264

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSS 264
           PG   V++  TL TTV+   EN    +   + 
Sbjct: 265 PGRFFVSSAFTLYTTVIAKRENSGRPMYYLND 296


>gi|238927648|ref|ZP_04659408.1| conserved hypothetical protein [Selenomonas flueggei ATCC 43531]
 gi|238884573|gb|EEQ48211.1| conserved hypothetical protein [Selenomonas flueggei ATCC 43531]
          Length = 84

 Score = 87.5 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 1/76 (1%)

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351
           + G  C   D F        + IGD +   D   +       +N        ++ +DG+I
Sbjct: 1   MTGSLCENNDKFAIDRALPKIDIGDILIIHDTGAHGSAMGFNYNAKLHCAELLRRMDGSI 60

Query: 352 KAIRE-FSYNDYYNNL 366
           + IR   + +DY+  L
Sbjct: 61  ELIRRPQTIDDYFATL 76


>gi|87308556|ref|ZP_01090696.1| probable diaminopimelate decarboxylase [Blastopirellula marina DSM
           3645]
 gi|87288648|gb|EAQ80542.1| probable diaminopimelate decarboxylase [Blastopirellula marina DSM
           3645]
          Length = 504

 Score = 87.5 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 48/407 (11%), Positives = 110/407 (27%), Gaps = 82/407 (20%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P  ++    L  NL     +  +     ++  A K        D       G   +SL
Sbjct: 65  GSPLNILHASPLAKNLAAFNRVAADHQLDFQVFFARKANKCLSFVDEATASGAGIDVASL 124

Query: 61  YEVMLGHEKFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E+          +H    A   ++  + A + +  TI  +   +L +          + 
Sbjct: 125 AELQQVVANGVRRSHIICTAAIKEEALLAACVQHGVTIAIDNGDELEQLASLLTNDSSQA 184

Query: 119 GLRINPSVSYSKFILADPN-----RPFSRLGEKCKDKIESEIKNVNGLMFHN--NCENKS 171
            + +  S                   F     + +  ++S   +++G+ FH      ++ 
Sbjct: 185 SIALRLSGFEHDGNRLHSRFGIDIGQFEDFVSRNRGALDSPALSIDGIHFHLDGYSASQR 244

Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHF--------------------------- 204
               S  L  I           +++ +GGG+                             
Sbjct: 245 VSAISQCLGLI-DRLRELGHVPKFLDIGGGVPMSYLEDKSQWETFWEAHRESLLQRRDPI 303

Query: 205 ---------------------TDKDYPVKDFCQRLKEFS-------------EKYSVQIY 230
                                    Y      Q L+                 + ++Q+ 
Sbjct: 304 TYRNHGLGFTAIEEKIYGSRNCYPYYQEGVQAQWLEMVLSGRCENKTIATAIRERNLQLR 363

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE-------SATIYP 283
            EPG +++         V+   ++      +  ++                    + +  
Sbjct: 364 CEPGRSLLDGCGLTIARVVFRKQHPNGDWFIGLAMNRTQCRTSSDDFLVDPILIRSQVQN 423

Query: 284 NTGPYTAMVCGRSCLAGDIF--GEFHFEKPVKIGDRISFEDVAGYNI 328
                   + G  C+  ++    +  F   V+IGD ++F + AGY +
Sbjct: 424 PAPAIEGYLVGAYCMESELLTLRKLRFPDGVEIGDLVAFPNTAGYLM 470


>gi|21780355|gb|AAM77691.1|AF522351_1 ornithine decarboxylase [Sorghum bicolor]
          Length = 339

 Score = 87.1 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 37/267 (13%), Positives = 75/267 (28%), Gaps = 14/267 (5%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y++D  ++++ +D          V+   A+KC         L         +S  E+ 
Sbjct: 58  PFYVLDLGEVVSLMDQWNVAL--PNVRPFYAVKCNPEPSFLSMLAAMGSNFDCASRAEIE 115

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                    E   +    K             +   T    ++     +   K   L   
Sbjct: 116 YVLSLGISPERIVFANPCKPESDIIFAEKVG-VNLTTYDLEDEVYKIKKHHPKCELLLRI 174

Query: 124 PSVSYSKFILADPNRPFSRLGEKCK---DKIESEIKNVNGLMFHNNCE----NKSFLCFS 176
             +S            F    E+ +      ++    V+G+ FH +      N      +
Sbjct: 175 KPMS-DGNARCPMGSKFGAFPEEIEPVFRIAQASRLTVSGVSFHIDSGDADSNAYLGAIA 233

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
           A  +  E      ++++  + + GG                   + FS +  + I   PG
Sbjct: 234 AAKQVFETAAKFGMSKMNVLDIDGGFTSGHQFTTATTTVKSALQQHFSNEPELTIIAGPG 293

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIV 261
                   TL TT++            
Sbjct: 294 RFFAETAYTLATTIIGKRVRGDLREYW 320


>gi|327540825|gb|EGF27386.1| diaminopimelate decarboxylase [Rhodopirellula baltica WH47]
          Length = 506

 Score = 87.1 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 55/406 (13%), Positives = 116/406 (28%), Gaps = 80/406 (19%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P  L+  + +  N++    + +  G   ++  A K     G  D   +   G  ++S 
Sbjct: 68  GSPLNLVRPRTMRRNVEELNAVARERGLDFRVFFARKANKCLGFVDEAIESNFGVDTASE 127

Query: 61  YEVMLGHEKFGG--ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E+    ++     +         D  ID  L     I  +   +L    D+A +L ++ 
Sbjct: 128 NELRQCLQQCVPAKDLICTAAIKSDSLIDLCLQQQVCIAVDNDDELQIIVDRANELGRRA 187

Query: 119 GLRIN-PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHN------------ 165
            + +      +    LA               ++ S    V G+ FH             
Sbjct: 188 RIALRLGGFRHEGVKLATRFGFDVDRDRDLPQRLTSLPVMVQGIHFHLDGYDAGQRVSAL 247

Query: 166 ---------------------------NCENKSFLCFSAMLKNIEK-------EFGHFIT 191
                                          +    ++   K   +          +   
Sbjct: 248 SVAMEWVERLRAVGQPVEFIDMGGGFPMSYLEEHRQWATFWKEHRRALLGERDTLTYHGH 307

Query: 192 QIEWISLGG---GIHFTDKDY-------------PVKDFCQRLKEFSEKYSVQIYLEPGE 235
            +     GG   G       +               +   + +     + +VQ+  EPG 
Sbjct: 308 GLGLAVEGGRVVGQPKMYPFFQRPVRGNWLAGVLDSRIEGKAIANRLLELNVQLRCEPGR 367

Query: 236 AIVTNTTTLNTTVLDISENIKNLV---------IVDSSVEAHVPDYLLYQESAT--IYPN 284
           +I+         V    +N +               +S +  + D +L  + +       
Sbjct: 368 SILDGCGLTVARVEFRKQNAEGDWLIGLSMNRTQCRTSSDDFLVDPILVPKQSCFDRATE 427

Query: 285 TGPYTAMVCGRSCLAGDIFG--EFHFEKPVKIGDRISFEDVAGYNI 328
           T P +  + G  C   ++    +  F   V+ GD I+F + AGY +
Sbjct: 428 TKPMSGYLVGAYCTESELISLRKMQFPSGVQRGDLIAFPNTAGYFM 473


>gi|149178621|ref|ZP_01857207.1| probable diaminopimelate decarboxylase [Planctomyces maris DSM
           8797]
 gi|148842547|gb|EDL56924.1| probable diaminopimelate decarboxylase [Planctomyces maris DSM
           8797]
          Length = 501

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 59/441 (13%), Positives = 124/441 (28%), Gaps = 103/441 (23%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P  +++ Q    N      + +  G++  +  A K        +T      G  ++S+
Sbjct: 56  GSPLNVLNTQPFERNAKALYDVAEAQGLEFDVYFARKANKCLAFVETAKNQGYGVDTASI 115

Query: 61  YEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E+    + +   E      A   +  +   + +  TI  + + +L +    A++L ++ 
Sbjct: 116 QELQQVLDNQVPPEKIICTAAVKSEALLRLCIKSGVTIAVDHLDELMQIVILAEQLKQRA 175

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE------------SEIKNVNGLMFHNN 166
            + +  S            R  SR G    +                +  N+ G+ FH +
Sbjct: 176 DIAVRLSG-----FQHQGARLLSRFGFDLDEIRPLIEDLQNASPHCLQYLNLIGVHFHLD 230

Query: 167 CENKSFLCFSAMLKNI-EKEFGHFITQIEWISLGGGIHF--------------------- 204
              ++    +         E       + ++ +GGG                        
Sbjct: 231 GYCQAQRVSAIQQLLPLIDELRSRDFPVRFLDIGGGFPMSYLESETEWDTFWQTHRRALL 290

Query: 205 ---------------------------TDKDYPVKDFCQRLK-------------EFSEK 224
                                          Y        L+             +   K
Sbjct: 291 GEHRPLTYRNHGLGLTLVEGTLIGKPNCYPYYQSPVQANWLEGILTSECEAGTIADSLRK 350

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV---------IVDSSVEAHVPDYLLY 275
             +Q+  EPG +++         V    +                  +S +  + D LL 
Sbjct: 351 RQIQLRCEPGRSLLDGCGFTAARVEFRKQQPTGDWLIGLSMNRTQCRTSSDDFLVDPLLI 410

Query: 276 QESATIYPNTGP--YTAMVCGRSCLAGDIFG--EFHFEKPVKIGDRISFEDVAGYNI--- 328
             +        P   +  + G  C   ++    +  F   V IGD I F + AGY +   
Sbjct: 411 PATEESLLPRTPAGISGYLVGAYCTESELLCLRKLQFPHGVGIGDLIVFPNTAGYFMHFL 470

Query: 329 -NRKNWFNGINMPTIAVKNVD 348
            +R + F    +    V + D
Sbjct: 471 ESRSHQF---PLAQNVVYDND 488


>gi|114621182|ref|XP_001154571.1| PREDICTED: ornithine decarboxylase antizyme inhibitor isoform 1
           [Pan troglodytes]
          Length = 390

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 50/343 (14%), Positives = 93/343 (27%), Gaps = 33/343 (9%)

Query: 38  CFAAWGMFDTLNQYMDGTT--SSS--LYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSN 92
              + G+ D      +          L E+ L  E     E   Y    K        + 
Sbjct: 8   ANYSVGLLDEGTNLGNVIDNYVYEHTLNEMALVQELGVPPENIIYISPCKQVSQIKYAAK 67

Query: 93  CDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152
               I    +++   K      + K+ L I    +              +      +  +
Sbjct: 68  VGVNILTCDNEIELKKIARNHPNAKVLLHIATEDNIGGEEGNMKFGTTLKNCRHLLECAK 127

Query: 153 SEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGI-HFTDKD 208
                + G+ FH +   K    +   L +    F   G     +  + +GGG      + 
Sbjct: 128 ELDVQIIGVKFHVSSACKESQVYVHALSDARCVFDMAGEIGFTMNMLDIGGGFTGTEFQL 187

Query: 209 YPVKDFCQRL--KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE 266
             V      L    F E   V+I  EPG   V++  TL   ++       +         
Sbjct: 188 EEVNHVISPLLDIYFPEGSGVKIISEPGSYYVSSAFTLAVNIIAKKVVENDKFPSGVEKT 247

Query: 267 AHVPDYLLYQE----------------------SATIYPNTGPYTAMVCGRSCLAGDIFG 304
                  +Y                              +   +T+ + G SC   D   
Sbjct: 248 GSDEPAFMYYMNDGVYGSFASKLSEDLNTIPEVHKKYKEDEPLFTSSLWGPSCDELDQIV 307

Query: 305 EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
           E      + +GD + F+++   + +  + FN    P I     
Sbjct: 308 ESCLLPELNVGDWLIFDNMGADSFHEPSAFNDFQRPAIYYMMS 350


>gi|210613889|ref|ZP_03289953.1| hypothetical protein CLONEX_02166 [Clostridium nexile DSM 1787]
 gi|210150914|gb|EEA81922.1| hypothetical protein CLONEX_02166 [Clostridium nexile DSM 1787]
          Length = 74

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 26/69 (37%), Positives = 42/69 (60%)

Query: 2  IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
          + TP Y+I +++L  NL+    +    G K+LLA K F+ + ++  + QY+ GTT+S LY
Sbjct: 6  LPTPCYVIQEEQLRQNLEILKGVMDRTGCKILLAQKAFSMYEVYPLIAQYLSGTTASGLY 65

Query: 62 EVMLGHEKF 70
          E  LG E+ 
Sbjct: 66 EARLGAEEM 74


>gi|296207399|ref|XP_002750716.1| PREDICTED: arginine decarboxylase [Callithrix jacchus]
          Length = 447

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 43/294 (14%), Positives = 90/294 (30%), Gaps = 16/294 (5%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++       +++    V+    +KC ++ G+   L Q   G + ++  E+ L
Sbjct: 41  FFVADLGAIVR--KHFYFLKCLPRVRPFYVVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 98

Query: 66  G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             H         Y    K        +     + +  +++   K        K+ L I  
Sbjct: 99  VQHIGIPASKIIYANPCKQIAQIKYAAKRGIQLLSFDNEMELAKVVKSHPSAKMVLCIAN 158

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S+S   L+       +      +  +     V G+ FH          ++  + +   
Sbjct: 159 DDSHSLNRLSLKFGVPLKSCRHLLESAKKSHVEVVGVSFHVGSGCPDPQAYAQSIADARL 218

Query: 185 EFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPGE 235
            F        ++  + LGGG   T+      +    +        F E   V I  E G 
Sbjct: 219 VFEMGTELGHRMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEGCGVDILAELGR 278

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT 289
             VT+   +  ++    E + +    + S          Y     I     P  
Sbjct: 279 YYVTSAFAVAVSITAKKEVLLDQPGREGSPLL----CQSYYHPPHIATCAAPDP 328


>gi|294813528|ref|ZP_06772171.1| Putative amino acid decarboxylase [Streptomyces clavuligerus ATCC
           27064]
 gi|294326127|gb|EFG07770.1| Putative amino acid decarboxylase [Streptomyces clavuligerus ATCC
           27064]
          Length = 455

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 59/419 (14%), Positives = 121/419 (28%), Gaps = 67/419 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           P++++       NL     +   AGV  ++  A K   A    +   +   G   +S  E
Sbjct: 37  PFHVLLPDAFDTNLAALRAVLTEAGVDGQVYFAKKANKAAVWVERCAEGGAGVDVASTGE 96

Query: 63  VMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           +         G +            +   + +   I  + + +L+     A     +   
Sbjct: 97  LREALGHGVRGEDLVVTGPVKSTELLRLAVRHGALIAVDALDELDTVVMTALNGRSRPA- 155

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKD-KIESEIKNVNGLMFHN-NCENKSFLCFSAM 178
           R+      +    +        LG   +      +   + G  FH    +  +    +A 
Sbjct: 156 RVLLRALPTGQPHSRFGLTGDELGLALQRSARAGKALRMEGFSFHLSGYDLTARAELAAR 215

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTD---------------------------KDYPV 211
           L  + ++        + IS+GGG+  +                              YP 
Sbjct: 216 LVRLCRQARALGLTADRISIGGGLPISYTDAESWRAFLAAQHSGHYHAGKSFTEADFYPY 275

Query: 212 KDFC------------------QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE 253
                                 Q L E        + LEPG A++         +  + E
Sbjct: 276 HSPVSGAGALRALLAARPDGQQQTLAELLRDSDTALLLEPGRALLDRAGATVFAIQGVKE 335

Query: 254 NIKNLVIVDSSVEAHVPD---YLLYQESATIYPNTGP-----YTAMVCGRSCLAGDIFGE 305
               L++        + +      Y     +    G      + A V   +CL  D+   
Sbjct: 336 RDGYLLLTVDGTSLSLSEQWFASEYLPDPWLLSPDGGAAPGLHRAAVGAATCLESDLVSW 395

Query: 306 FH--FEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPTIAVKNVDG----TIKAIREF 357
               F +  + GD + + + AGY ++   + F+ + +P   V +         +  R F
Sbjct: 396 RKIGFLQRPRAGDLLVYPNTAGYQMDSNESSFHDLPLPPKVVVDRTERPRPRWRLDRHF 454


>gi|254390038|ref|ZP_05005259.1| amino acid decarboxylase [Streptomyces clavuligerus ATCC 27064]
 gi|326442065|ref|ZP_08216799.1| amino acid decarboxylase [Streptomyces clavuligerus ATCC 27064]
 gi|197703746|gb|EDY49558.1| amino acid decarboxylase [Streptomyces clavuligerus ATCC 27064]
          Length = 457

 Score = 86.3 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 59/419 (14%), Positives = 121/419 (28%), Gaps = 67/419 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           P++++       NL     +   AGV  ++  A K   A    +   +   G   +S  E
Sbjct: 39  PFHVLLPDAFDTNLAALRAVLTEAGVDGQVYFAKKANKAAVWVERCAEGGAGVDVASTGE 98

Query: 63  VMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           +         G +            +   + +   I  + + +L+     A     +   
Sbjct: 99  LREALGHGVRGEDLVVTGPVKSTELLRLAVRHGALIAVDALDELDTVVMTALNGRSRPA- 157

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKD-KIESEIKNVNGLMFHN-NCENKSFLCFSAM 178
           R+      +    +        LG   +      +   + G  FH    +  +    +A 
Sbjct: 158 RVLLRALPTGQPHSRFGLTGDELGLALQRSARAGKALRMEGFSFHLSGYDLTARAELAAR 217

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTD---------------------------KDYPV 211
           L  + ++        + IS+GGG+  +                              YP 
Sbjct: 218 LVRLCRQARALGLTADRISIGGGLPISYTDAESWRAFLAAQHSGHYHAGKSFTEADFYPY 277

Query: 212 KDFC------------------QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE 253
                                 Q L E        + LEPG A++         +  + E
Sbjct: 278 HSPVSGAGALRALLAARPDGQQQTLAELLRDSDTALLLEPGRALLDRAGATVFAIQGVKE 337

Query: 254 NIKNLVIVDSSVEAHVPD---YLLYQESATIYPNTGP-----YTAMVCGRSCLAGDIFGE 305
               L++        + +      Y     +    G      + A V   +CL  D+   
Sbjct: 338 RDGYLLLTVDGTSLSLSEQWFASEYLPDPWLLSPDGGAAPGLHRAAVGAATCLESDLVSW 397

Query: 306 FH--FEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPTIAVKNVDG----TIKAIREF 357
               F +  + GD + + + AGY ++   + F+ + +P   V +         +  R F
Sbjct: 398 RKIGFLQRPRAGDLLVYPNTAGYQMDSNESSFHDLPLPPKVVVDRTERPRPRWRLDRHF 456


>gi|213423763|ref|ZP_03356743.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 257

 Score = 86.0 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 28/215 (13%), Positives = 57/215 (26%), Gaps = 20/215 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D   +   +             +  A K  +   +   +        S SL E+ 
Sbjct: 27  PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRAQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D    A +S     +   +V  L +    +     ++
Sbjct: 82  RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G    D   +          + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAVMQKYRLKLVGIHMHIGSGVDYG 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207
                    + +        +E IS GGG+     
Sbjct: 200 HLEQVCGAMVRQVL-ECGQDVEAISAGGGLSIPYH 233


>gi|213646737|ref|ZP_03376790.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
          Length = 259

 Score = 86.0 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 28/215 (13%), Positives = 57/215 (26%), Gaps = 20/215 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D   +   +             +  A K  +   +   +        S SL E+ 
Sbjct: 27  PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRAQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D    A +S     +   +V  L +    +     ++
Sbjct: 82  RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------EIKNVNGLMFHNNCENKSF 172
            LR+NP   +      +     S+ G    D   +          + G+  H        
Sbjct: 140 WLRVNPGFGHGHSQKTNTGGENSKHGIWHSDLPAALAVMQKYRLKLVGIHMHIGSGVDYG 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207
                    + +        +E IS GGG+     
Sbjct: 200 HLEQVCGAMVRQVL-ECGQDVEAISAGGGLSIPYH 233


>gi|165975419|ref|YP_001649251.1| MccE [Escherichia coli]
 gi|158347574|gb|ABW37145.1| MccE [Escherichia coli]
          Length = 589

 Score = 86.0 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 38/376 (10%), Positives = 94/376 (25%), Gaps = 26/376 (6%)

Query: 6   YYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           + + D    L  L+      K+      +  + K          ++         S+ E+
Sbjct: 29  FVIFDVDGALERLEHYRCQLKSFFPNSSIAYSYKSNNLAQWCQIISGKGLYAEVCSVDEM 88

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
            L                K  E+   +     I  + + +  +  +  +       + + 
Sbjct: 89  NLAKRDGFNRIVFDGPLKKTSELLKAIEIGALIEVDNIDECKRLNELCKLHKLTCRIHLR 148

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
            S  Y   +          +        +SE   ++G   H      +       +    
Sbjct: 149 LSHYYDDNLSRFGLSESEAINLLEMLISKSEYLILDGFHLHVGSNLPNAEKICKAVIQYH 208

Query: 184 KEFGHFITQIEWISLGGGIH-------FTDKDYPVKDFCQRLKEFSEKYS------VQIY 230
           +    ++     ++LG GI          +     + F   + +  +             
Sbjct: 209 ELILRYMPDDGTLNLGSGIPADSFSASSDNPTPCPEVFFSSIYDTIKNCFGTVCDKWNYI 268

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQ------ESATIYPN 284
            EPG  +V +       V+         V   +     +P    +        +     +
Sbjct: 269 FEPGRHLVEDFGYFIGKVISTKNRYGVKVAQTNIGINWIPSIRNWDHSFTLFHNHNHISD 328

Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRIS-FEDVAGYNINRKNWFNGINMPTIA 343
                 ++ G +C   D            + D +        Y++   N +   N+  + 
Sbjct: 329 DKSDEYIIAGFNCFECDCLFPSVILPS-NLSDYLFSVRGCGAYDMQTGNQW-TRNLYAVY 386

Query: 344 VKNVD--GTIKAIREF 357
               D     +  R  
Sbjct: 387 TITNDVVNISRIHRRE 402


>gi|126669235|ref|ZP_01740145.1| putative diaminopimelate decarboxylase protein [Marinobacter sp.
           ELB17]
 gi|126626303|gb|EAZ96987.1| putative diaminopimelate decarboxylase protein [Marinobacter sp.
           ELB17]
          Length = 244

 Score = 86.0 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 68/211 (32%), Gaps = 16/211 (7%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            Y+ D   L +++   +        ++  A K   +  +  TL  ++ G   +S  E+  
Sbjct: 35  AYIYDLDSLSSHVQAVVEALP-PQCEMFYATKANPSLPLLQTLTPWVHGLEVASGGELRW 93

Query: 66  GHEKFGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKLHKKIGLR 121
             + F      +    K       AV SN + I   ++ +L +  +     +  ++I LR
Sbjct: 94  VRDHFPELPVIFGGPGKLVSELKHAVESNVELIHVESLLELERLTEITGKSQQTQEILLR 153

Query: 122 INPSVSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCENKSFLC 174
           IN ++              +  G               +    + G  FH          
Sbjct: 154 INLNLPEMATTRLTMGGVPTPFGMDEDTLQQALPMLARASHVRLRGFHFHLMSHQLDPDR 213

Query: 175 F----SAMLKNIEKEFGHFITQIEWISLGGG 201
                    + + +    +  QI  I++GGG
Sbjct: 214 HLALIQTYCRRVSQWESDYDLQITQINVGGG 244


>gi|113205426|gb|AAU90343.2| Pyridoxal-dependent decarboxylase, C-terminal sheet domain
           containing protein [Solanum demissum]
          Length = 262

 Score = 86.0 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 80/241 (33%), Gaps = 15/241 (6%)

Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----NVNGLMFHNNCEN 169
            H +  L +          L    + F  L E+ +  +          V G+ FH     
Sbjct: 9   WHPQCRLLLRIKAPSDSGSLRPLGKKFGALPEEIESLLHYACNVAGLKVVGVSFHVGSIA 68

Query: 170 KSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKDYPVKDFC-QRLKEFSEK 224
           +    +   + N    F       I +++ +++GGG   T     +     + +++F   
Sbjct: 69  QDPTIYREAIANARAVFDVADYLGIPKMQILNIGGGFRSTPLFEEIASVVNEAVQDFFPD 128

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
            +++I  EPG        TL T V+       K    +D  +       L       I  
Sbjct: 129 PNLKIIAEPGRFFPETAFTLVTHVIGKRVRGEKIEYWIDEGIYGSFRPTLYNSCFVGIKT 188

Query: 284 NTGPYTAMVC-----GRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            +   +  +      G SC + D          +++ D I F D+  Y+      FNG +
Sbjct: 189 ISMKESCEIGESTIYGPSCDSLDAVAVDIKLPELELDDLIVFYDMGAYSKCAGTKFNGFD 248

Query: 339 M 339
           M
Sbjct: 249 M 249


>gi|294638406|ref|ZP_06716643.1| pyridoxal-dependent decarboxylase [Edwardsiella tarda ATCC 23685]
 gi|291088475|gb|EFE21036.1| pyridoxal-dependent decarboxylase [Edwardsiella tarda ATCC 23685]
          Length = 235

 Score = 85.6 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 54/202 (26%), Gaps = 18/202 (8%)

Query: 143 LGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQ----IEWISL 198
           L    +   +     + G  FH      S     A++++   + G +  Q    IE ++L
Sbjct: 13  LAAALRLIADCRWLRLRGFHFHLLSHQLSVDNHLALIQHCLTQVGQWCRQFQLSIEMVNL 72

Query: 199 GGGIHFTD-------KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251
           GGG                       ++   +  S  +  E G  I          VLDI
Sbjct: 73  GGGFGINYRDPSHHFDWDDFCQRLPAVRHACQATSWLLRFECGRYISAPCGYYVMEVLDI 132

Query: 252 SENIKNLVIVDSSVEAHVP-DYLLYQESATIYPNTG------PYTAMVCGRSCLAGDIFG 304
             N+     +      H         +                    + G+ C   D+  
Sbjct: 133 KRNLGEWFAIGHGGTHHFRTPVAQGHDHPFQVVRRETPAQIRDQRVTLVGQLCTPKDVLA 192

Query: 305 EFHFEKPVKIGDRISFEDVAGY 326
                  +  GD + F     Y
Sbjct: 193 RRQPISALAPGDWLVFPLAGAY 214


>gi|298708522|emb|CBJ49155.1| diaminopimelate decarboxylase [Ectocarpus siliculosus]
          Length = 477

 Score = 85.6 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 50/407 (12%), Positives = 113/407 (27%), Gaps = 78/407 (19%)

Query: 33  LLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGGETH--AYNVAYKDCEIDAVL 90
            +A+K      +     +   G  ++S  E+ +G             + A  D E++  L
Sbjct: 63  CVAVKSCPLSVVVQEAVRAGLGIEAASFVELYMGLALGCPAVLAAFDSPAKTDGELEMAL 122

Query: 91  SNCDTIIFNTVSQLNKFKDKAQKLHK----KIGLRINPSVSYSKFILADPNRPFSRLGEK 146
           +    I  N++ +L++     ++       ++G+R+NP V          +   S+    
Sbjct: 123 ARGVLINANSLVELDRIDAIIKRQGCATSARVGIRLNPLVGAGSIAELSVSTSTSKFAVP 182

Query: 147 C----KDKI---ESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQI-----E 194
                   +     +   +  L  H   +  S    +  +  + +      +++      
Sbjct: 183 MTPANVQAVVDSFRKWPWLVALHTHVGSQGYSVEQLAEGIAVLCEIADVIDSKLGKGRVT 242

Query: 195 WISLGGGIHFTDKDY----PVKDFCQRLKEF----SEKYSVQIYLEPGEAIVTNTTTLNT 246
            + +GGG+              ++   LK+            +  E G A V       +
Sbjct: 243 LLDIGGGLPANYDSDEVSPTFHEYAAALKKAAPSLFHNTERIVVTEFGRAFVAKVAMTVS 302

Query: 247 TVLDI--------------------------------------SENIKNLVIVDSSVEAH 268
            V  +                                             ++     +  
Sbjct: 303 KVEYVRSSDGSGAEGRAAGKATQQEEDPSNVVGSPGKVPESSLPVEDHQTLVTHIGADLF 362

Query: 269 VPD-YLLYQESATIYPNT--------GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319
           +   Y   + S  +   +              V G  C  GD             GD + 
Sbjct: 363 LRTSYCPGRYSHRLSMYSRNGAALGGSAIRTDVAGPLCFQGDYVARGASLPRASPGDLVV 422

Query: 320 FEDVAGYNINRKNWFNGINMPTI--AVKNVDGT--IKAIRE-FSYND 361
             D     ++  +       P++    +N DGT  ++ ++E  S  D
Sbjct: 423 VHDTGANTLSLFSRHCSRRFPSVYGYARNADGTVCVRLVKEKESVQD 469


>gi|83646422|ref|YP_434857.1| diaminopimelate decarboxylase [Hahella chejuensis KCTC 2396]
 gi|83634465|gb|ABC30432.1| Diaminopimelate decarboxylase [Hahella chejuensis KCTC 2396]
          Length = 461

 Score = 85.2 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 51/390 (13%), Positives = 112/390 (28%), Gaps = 51/390 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P +L+  Q    NL     +   A ++  +L A+K          L     G   SSL
Sbjct: 47  GSPVHLMFPQIFEENLYRFRRVYAAADIRGDVLYAMKVNRCNSFLKALAVNGAGADVSSL 106

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTII-FNTVSQLNKFKDKAQKLHKKI 118
           +E+         G+  + + A+K  +   +      ++  ++  +    +      HK  
Sbjct: 107 FELQDALAAGVEGDACSLSGAFKSPDFVELGVKKGAVVAIDSAEEFEGLQALLLASHKGG 166

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE-NKSFLCFSA 177
             RI    +             +        +   +   + G+  H      +      A
Sbjct: 167 KTRIKLRWNGDVGASRFGMNSETLRTLADTLQPFQDRLELEGVALHLGGYSIRQRAEALA 226

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIH----------------------------FTDKDY 209
           +   + +           +++GGG                                   +
Sbjct: 227 VSIEMIRYIRELGFDARSVNIGGGFPTRYLSRSNWEAFQGYNGSHYYTDGHPPSDFYPYW 286

Query: 210 PVKDFCQRLKEFSEKYSVQ---------IYLEPGEAIVTNTTTLNTTVLDISENIKNLVI 260
             +   + L++       +         +Y+EPG A+V         V  +     +  +
Sbjct: 287 SPRVKEEALEDILAACGNRERLRQESVALYVEPGRALVDQAGMTLFRVKGVKRLGPDKHV 346

Query: 261 VDSSVEAHVPDYLLYQ------ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP--V 312
           +     +       +                G   A + G SCL  D+  +         
Sbjct: 347 IVVDGFSFSACETWFHSEFLVDPIVIGAGQGGAGVAYIAGGSCLESDVLTKRWIPFKNLP 406

Query: 313 KIGDRISFEDVAGYNIN-RKNWFNGINMPT 341
           + GD ++F + AGY ++  +  F+    P 
Sbjct: 407 QAGDCLAFVNTAGYQMDLMETCFHRAPTPK 436


>gi|15858867|gb|AAL08051.1| ornithine decarboxylase-like protein variant 4 [Homo sapiens]
          Length = 374

 Score = 85.2 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/267 (13%), Positives = 83/267 (31%), Gaps = 24/267 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++       +++    V+   A+KC ++ G+   L Q   G + ++  E+ L
Sbjct: 41  FFVADLGAIVR--KHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMEL 98

Query: 66  G-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI------ 118
             H              K        +     + +  +++   K        K       
Sbjct: 99  VQHIGIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKFVQQRGT 158

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCK------DKIESEIKNVNGLMFHNNCENKSF 172
              I   +  +       +    + G   K      +  +     V G+ FH        
Sbjct: 159 ACLIRMVLCIATDDSHSLSCLSLKFGVSLKSCRHLLENAKKHHVEVVGVSFHIGSGCPDP 218

Query: 173 LCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSE 223
             ++  + +    F        ++  + LGGG   T+      +    +        F E
Sbjct: 219 QAYAQSIADARLVFEMGTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPE 278

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLD 250
              V I+ E G   VT+  T+  +++ 
Sbjct: 279 GCGVDIFAELGRYYVTSAFTVAVSIIA 305


>gi|326435712|gb|EGD81282.1| ornithine decarboxylase [Salpingoeca sp. ATCC 50818]
          Length = 648

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/300 (12%), Positives = 82/300 (27%), Gaps = 13/300 (4%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           ++L D   +     T   +     ++   A+KC +   +   L     G   +S  E+  
Sbjct: 41  FFLTDLHDIWCKHRTWQAMLPR--IEPFYAIKCNSDPVILKALAALNLGFDCASAKEIQA 98

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             +     +   +    K              +    ++    K        ++ LR+  
Sbjct: 99  MLDLGVAPDRIIFANPCKALSHLLYAKEKGVKLMTFDNENELLKCAEHFPSARLVLRVLA 158

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L            +      +   NV G+ FH    +     F+  +     
Sbjct: 159 DDSKAVCRLGLKYGARPSCTLRLLQLARTLHLNVVGVSFHVGSGSTDASAFADAVYRARA 218

Query: 185 EFGHF---ITQIEWISLGGGIHFTDKDYPVKDFC-------QRLKEFSEKYSVQIYLEPG 234
            F        +   + +GGG   T     +              + F     V++  EPG
Sbjct: 219 VFDQALSLGFRPTLLDVGGGFPGTTYTSAISFDAIASCLTRAVDECFPPSCGVRVIAEPG 278

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCG 294
              V +   L  +V+      +     +++    +        S+    +       V G
Sbjct: 279 RFYVASACCLAVSVIGKRTPHEVAGDHNNNNRRAIDTTGNGHGSSARCHDVPAAAPRVVG 338



 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 25/61 (40%)

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                  P T  + G +C + D   +      +++GD + + D+  Y     + FNG + 
Sbjct: 521 CDVQRAPPLTCSIWGPTCDSMDCIEKRASLPELEVGDWLFYPDMGAYTSCAASTFNGFDK 580

Query: 340 P 340
           P
Sbjct: 581 P 581


>gi|47196205|emb|CAF88057.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 375

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 4/91 (4%)

Query: 250 DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFE 309
            +++ +           AH    L  +           Y + + G +C   D   E    
Sbjct: 278 YVNDGVYGSFNCILYDHAHCMPTLHKKRKPD----EVRYPSSIWGPTCDGLDRIVELCSL 333

Query: 310 KPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
             +++GD + FE++  Y +   + FNG   P
Sbjct: 334 PDLQVGDWLVFENMGAYTVAASSTFNGFQKP 364


>gi|317506808|ref|ZP_07964582.1| pyridoxal-dependent decarboxylase [Segniliparus rugosus ATCC
           BAA-974]
 gi|316254882|gb|EFV14178.1| pyridoxal-dependent decarboxylase [Segniliparus rugosus ATCC
           BAA-974]
          Length = 394

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/341 (12%), Positives = 88/341 (25%), Gaps = 33/341 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            T   +ID+ ++  +             ++  + +      +   L          S  E
Sbjct: 50  GTACDVIDEAEVRAHAKAYRAAL--PHGEIAYSGRALLTPAIAGWLADEGLSLDVGSPDE 107

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
           +          +            +   +    +   +V   ++    A ++ +   + +
Sbjct: 108 LGAALRGGFPASRIIAGGAVKTREELAAALAARVGRISVDTFDELAWLASRVDRPQQILL 167

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
              +S  +   A          E        +   V GL  H +          A+L+ +
Sbjct: 168 RVGLS-DELEQAFGFPLSGLAEEAWLRASRQKHLRVVGLHCHVSSG-THDQAQGALLEFL 225

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTT 242
           ++         E I+LGGG+        V+      +    +   ++ +EPG+ +V    
Sbjct: 226 DRMRAAHGFVAEQINLGGGV-------SVETARALAEAAVPRPLPRLVVEPGQGVVGQAG 278

Query: 243 TLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDI 302
                V+  S                              P        +  R  LA D+
Sbjct: 279 VRLVRVIAKSVGAHGEPCAHVDG-----PLPTAGALPRSCPGADLDECRLVNRHSLAADV 333

Query: 303 -----------------FGEFHFEKPVKIGDRISFEDVAGY 326
                                      + GD I+F  V  Y
Sbjct: 334 PTRLLSRPRSEHHCPAETAVVALPADARAGDLIAFPGVGAY 374


>gi|46204395|ref|ZP_00050057.2| COG0019: Diaminopimelate decarboxylase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 159

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 11/108 (10%), Positives = 25/108 (23%), Gaps = 4/108 (3%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D   +                ++  ++K      +     Q   G   +S  E
Sbjct: 36  GTPLFVYDAGTMRRTYRALREAVAGF-AEVDFSVKANPNPAVIRVFGQEGAGAEIASGAE 94

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDT--IIFNTVSQLNKF 107
                      E   +    K       +       I      ++ + 
Sbjct: 95  FDAALRAGVAAERILFAGPGKSAADLDRVIGGGIGEIHLENREEMARV 142


>gi|23012658|ref|ZP_00052688.1| COG0019: Diaminopimelate decarboxylase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 326

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 60/227 (26%), Gaps = 21/227 (9%)

Query: 143 LGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM----LKNIEKEFGHFITQIEWISL 198
           + +      +       G  FH    N+     +A+    +       G     +  I+L
Sbjct: 91  IPDAIATLRDCRALRFEGFHFHTVSNNRDAAGHAALCAAEIDLARAWAGEHGLDLRVINL 150

Query: 199 GGGIHFTDKDYPVKDFCQRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENI 255
           GGG      D   +   +RL       +    ++  E G  +          VLD+  + 
Sbjct: 151 GGGWGVDYADPAWRFDTERLASALRPLAGSGPRLQFECGRIVAAYHAAYLCEVLDLKRSH 210

Query: 256 KNLVIVDSSVEAHVP---DYLLYQESATIYPNTGPYTAM----------VCGRSCLAGDI 302
                +      H      +        +      +             + G  C   D+
Sbjct: 211 GRAFALLRGGTHHFRLPSSWAHDHPFHILPREEWDHPWPRPEIARMPVTLAGELCTPKDV 270

Query: 303 FGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNGINMPTIAVKNVD 348
                    +++GD + FE    Y  +  +  F     P     +  
Sbjct: 271 LARDVPVARLRVGDLVCFEMAGAYGWDISHHDFLCHAHPERIFLDQG 317


>gi|332830979|ref|XP_003311935.1| PREDICTED: antizyme inhibitor 1 [Pan troglodytes]
 gi|193787865|dbj|BAG53068.1| unnamed protein product [Homo sapiens]
          Length = 363

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 48/323 (14%), Positives = 90/323 (27%), Gaps = 31/323 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  K++        +     +K    +KC +A  + + L     G   SS  E+ L
Sbjct: 40  FFVGDLGKIVKKHSQWQNVVAQ--IKPFYTVKCNSAPAVLEILAALGTGFACSSKNEMAL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             E     E   Y    K        +     I    +++   K      + K+ L I  
Sbjct: 98  VQELGVPPENIIYISPCKQVSQIKYAAKVGVNILTCDNEIELKKIARNHPNAKVLLHIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             +              +      +  +     + G+ FH +   K    +   L +   
Sbjct: 158 EDNIGGEEGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARC 217

Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238
            F   G     +  + +GGG      +   V      L    F E   V+I  EPG   V
Sbjct: 218 VFDMAGEIGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDIYFPEGSGVKIISEPGSYYV 277

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE--------------------- 277
           ++  TL   ++       +                +Y                       
Sbjct: 278 SSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVYGSFASKLSEDLNTIPE 337

Query: 278 -SATIYPNTGPYTAMVCGRSCLA 299
                  +   +T+ + G SC  
Sbjct: 338 VHKKYKEDEPLFTSSLWGPSCDE 360


>gi|207110799|ref|ZP_03244961.1| diaminopimelate decarboxylase [Helicobacter pylori
          HPKX_438_CA4C1]
          Length = 82

 Score = 84.8 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 23/68 (33%)

Query: 3  KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
          KTP+YL D  K+           K     +  ALK  +   +   L     G    S+ E
Sbjct: 14 KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGE 73

Query: 63 VMLGHEKF 70
          +    +  
Sbjct: 74 IYRALKAG 81


>gi|218514643|ref|ZP_03511483.1| probable ornithine decarboxylase protein [Rhizobium etli 8C-3]
          Length = 264

 Score = 84.4 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 77/261 (29%), Gaps = 28/261 (10%)

Query: 100 TVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN 159
           +  ++ K    A        +  +   +           P   +       + +    + 
Sbjct: 1   SHEEVEKISRAAPGARVFCRVLTDGEGAEWPLSRKFGCVPQMAVDV----LVYAHQLGLQ 56

Query: 160 --GLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDF 214
             G+ FH   +      + + L + ++ F         ++ +++GGG             
Sbjct: 57  SYGVSFHVGSQMTKVDAWDSALADAKRVFVSLAKQGIHLQMVNMGGGFPTKYLRDVPSAE 116

Query: 215 C------QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV------- 261
                  Q L+        Q  +EPG  +V N   +   V+ IS+   N           
Sbjct: 117 AYGKSIYQALRTHFGNQIPQTIIEPGRGMVGNAGVIKAEVVLISKKSDNDDARWVFLDIG 176

Query: 262 -DSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK---PVKIGDR 317
               +   + + + Y        +      ++ G +C + D+  E +       + IGD 
Sbjct: 177 KFGGLAETMDEAIRYPIRTEHDGDEM-EPCVIAGPTCDSADVLYEKNLYPLPISLSIGDE 235

Query: 318 ISFEDVAGYNINRKNW-FNGI 337
           +  E    Y        FNG 
Sbjct: 236 VLIEGTGAYTTTYSAVAFNGF 256


>gi|45269005|gb|AAS55915.1| ornithine decarboxylase [Sus scrofa]
          Length = 152

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 37/104 (35%), Gaps = 4/104 (3%)

Query: 250 DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFE 309
            +++ +           AHV   L  +           Y++ + G +C   D   E    
Sbjct: 8   YVNDGVYGSFNCILYDHAHVQPLLQKRPKPD----EKYYSSSIWGPTCDGLDRIVERCRL 63

Query: 310 KPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKA 353
             + +GD + FE++  Y +   + FNG   P I       T + 
Sbjct: 64  PEMHVGDWMLFENMGAYTVAAASTFNGFQRPAIYYVMSGPTWQL 107


>gi|224535494|ref|ZP_03676033.1| hypothetical protein BACCELL_00357 [Bacteroides cellulosilyticus
          DSM 14838]
 gi|224522887|gb|EEF91992.1| hypothetical protein BACCELL_00357 [Bacteroides cellulosilyticus
          DSM 14838]
          Length = 92

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 26/71 (36%), Gaps = 2/71 (2%)

Query: 2  IKTPYYLIDKQKLLNNLDTAL-YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
          ++TP+Y  D + L + L        K    ++  A+K  A   +   + +   G    S 
Sbjct: 13 LRTPFYYYDTKVLRDTLSCMRAEAAKYGNFEVHYAVKANANPKVLTIIRENGLGADCVSG 72

Query: 61 YEVMLG-HEKF 70
           EV       F
Sbjct: 73 GEVRAAIKAGF 83


>gi|119612258|gb|EAW91852.1| antizyme inhibitor 1, isoform CRA_b [Homo sapiens]
          Length = 346

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 44/277 (15%), Positives = 82/277 (29%), Gaps = 9/277 (3%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  K++        +     +K    +KC +A  + + L     G   SS  E+ L
Sbjct: 40  FFVGDLGKIVKKHSQWQNVVAQ--IKPFYTVKCNSAPAVLEILAALGTGFACSSKNEMAL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             E     E   Y    K        +     I    +++   K      + K+ L I  
Sbjct: 98  VQELGVPPENIIYISPCKQVSQIKYAAKVGVNILTCDNEIELKKIARNHPNAKVLLHIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             +              +      +  +     + G+ FH +   K    +   L +   
Sbjct: 158 EDNIGGEEGNMKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARC 217

Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238
            F   G     +  + +GGG      +   V      L    F E   V+I  EPG   V
Sbjct: 218 VFDMAGEIGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDIYFPEGSGVKIISEPGSYYV 277

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY 275
           ++  TL   ++       +                +Y
Sbjct: 278 SSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMY 314


>gi|298711197|emb|CBJ32419.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 224

 Score = 84.0 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 16/118 (13%), Positives = 31/118 (26%), Gaps = 17/118 (14%)

Query: 265 VEAHVPDYLLYQESATIY------PNTGPYTAMVCGRSCLAGDIF---------GEFHFE 309
           +   +   L       +               +V G  C +GD+           E    
Sbjct: 99  MTELLRPSLYGALHPIVVVPAEGEGGGEIAEYVVVGHCCESGDLLTPVSGAASEIERRTL 158

Query: 310 KPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIAVKNVDGTIKAI-REFSYNDYYNN 365
              +IGD +  E    Y        +N        + +  G +  + R  +    + N
Sbjct: 159 AKAEIGDLVVVEGCGAYVAGMSAKNYNSFPEAPEVLLDSAGELHVVWRRQTLEQIFEN 216


>gi|12025046|gb|AAG45729.1|AF229440_2 y4yA [Sinorhizobium fredii]
          Length = 457

 Score = 83.7 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 57/416 (13%), Positives = 109/416 (26%), Gaps = 68/416 (16%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P  L+    L  NL     +  +  V+  +    K   + G+         G   SSL
Sbjct: 39  GSPLNLVWPDALQENLAALKGVLTDCRVEHAIYYGAKVNKSPGLMQAALSAGAGLDVSSL 98

Query: 61  YEVMLGH--EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           YE+         G    A   A        ++     I  +   +L              
Sbjct: 99  YELRDARLLGAEGVRLVATGPAKTGAFHQELIDCNALISVDPPGRLEDLIHGLPADVGPQ 158

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS-A 177
            + +           +    P   +               +GL FH +         + +
Sbjct: 159 PILLRLRPRNQS--KSRFGMPADAVVHCLARLAGESRLRFDGLNFHLSGYLWETRVAALS 216

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKD----------------------------- 208
              ++  E          I +GGG+     D                             
Sbjct: 217 EAADLIAEARRMGFSPRMIDIGGGLPIQYVDRARYEAHLAAQAPEDYRNGKIPDSFYPYG 276

Query: 209 -------------YPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNT--------- 246
                               + +  +  +  + + +EPG A+                  
Sbjct: 277 SNLSAADWLHRLLEAEMSQGRSVAGYLAREGLTLAMEPGRALADQAAITVFLISRVKALG 336

Query: 247 ---TVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIF 303
               V+ +  +  +      + E  V   L+          + P  A + G SCL  D+ 
Sbjct: 337 PDSHVIFVEGSSFSACETWFASEFLVDPILVPATRP--AAQSPPIRAYLAGHSCLDEDVL 394

Query: 304 GEF--HFEKPVKIGDRISFEDVAGYNIN-RKNWFNGINMPT--IAVKNVDGTIKAI 354
                 F      GD + + +  GY ++  +N F+   MP     VK+ +G    +
Sbjct: 395 SNRWLSFPIAPHAGDLLVYANTGGYQMDLLENEFHRHAMPARLCVVKDAEGHPILV 450


>gi|211639074|emb|CAR67686.1| Diaminopimelate decarboxylase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
          Length = 204

 Score = 83.7 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 50/181 (27%), Gaps = 19/181 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ D + ++  +             +  A K  +   +   + +Y     + SL E
Sbjct: 25  GTPLWVYDSETIIQKIKLLCQFDV-----VRFAQKACSNTHILRLMREYGVKVDAVSLGE 79

Query: 63  VMLG-HEKFGG----ETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
           +       F          +     D      ++     +   ++  L        +   
Sbjct: 80  IERALRAGFCPGQAESDIVFTADLIDGPTLQQVTKLGIPVNAGSIDMLEHIGR--YRKGH 137

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENK 170
            + LRINP   +      +     S+ G   +D       I      + GL  H      
Sbjct: 138 PVWLRINPGFGHGHSQKTNTGGENSKHGIWYQDLPLAIEKIRHYELKLLGLHMHIGSGVD 197

Query: 171 S 171
            
Sbjct: 198 Y 198


>gi|73537520|ref|YP_297887.1| Orn/DAP/Arg decarboxylase 2 [Ralstonia eutropha JMP134]
 gi|72120857|gb|AAZ63043.1| Orn/DAP/Arg decarboxylase 2 [Ralstonia eutropha JMP134]
          Length = 482

 Score = 83.7 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 49/405 (12%), Positives = 101/405 (24%), Gaps = 66/405 (16%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P  ++    L NN+     +        ++    K   +  +         G   SS 
Sbjct: 64  GSPLNVLWPHALRNNVAALRAVLATHCVQAEIFYGAKVNKSQALVKAAVMAGVGIDVSSR 123

Query: 61  YEVMLG-HEKFGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           +E+                  A  +   + +L++   I  +++ +L+      ++     
Sbjct: 124 HELRDALRAGADALRICATGPAKTEAFHEQLLAHGALISVDSLEELDDVCACLRRAPAGR 183

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-EIKNVNGLMFHN-NCENKSFLCFS 176
             R+           +        + +  K    + E     G  FH      ++     
Sbjct: 184 HARVLLRYCPDSARGSRFGMAADTVVQGLKHIASATERLAFEGFHFHLSGYGWETRAQAL 243

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTD-------------------------KDYPV 211
             L  +             I +GGG+                               YP 
Sbjct: 244 RELLPLIDAADSMGLTTTMIDIGGGLPVRYVDPDVYTEFLQSQRPEHYRNGIVPASFYPY 303

Query: 212 KDFCQR-----------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTT------- 247
                                  +  +     V + LEPG  +                 
Sbjct: 304 GGHIDAATWLDDFLNAPCTAGQSIAAWLRAGGVTLALEPGRCLAAQAGITVFRVTRSKPL 363

Query: 248 -----VLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDI 302
                V+ +  +  +      + E       +            P  A + G SCL  D+
Sbjct: 364 GDGRHVVFVEGSSFSACETWFASEFLADPAWI-SAVPPRTVGARPVQAYIAGHSCLDEDV 422

Query: 303 FGEFHFEK---PVKIGDRISFEDVAGYNIN-RKNWFNGINMPTIA 343
                          GD + + + AGY ++  +N F+   MP   
Sbjct: 423 L-TNRLLPFGGLPHPGDLLVYANTAGYQMDLLENEFHRHPMPRRV 466


>gi|282910112|ref|ZP_06317920.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp.
           aureus WW2703/97]
 gi|282326178|gb|EFB56483.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp.
           aureus WW2703/97]
          Length = 228

 Score = 83.7 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 68/201 (33%), Gaps = 11/201 (5%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66
           Y+ D   L ++L         +  ++  A+K  +   + DT++QY++G   +S  E+  G
Sbjct: 21  YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79

Query: 67  HEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                     +       +    AV      I   ++ +L +     +   K   + +  
Sbjct: 80  LVFKPANHIIFGGPGKTDEELRYAVSEGVQRIHVESMHELQRLNAILEDEDKTQHILLRV 139

Query: 125 S-VSYSKFILADPNRPFSRLGEK-------CKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
           +                ++ G          +  +     +++G  FH+   N       
Sbjct: 140 NLAGPFPNATLHMAGRPTQFGISEDEVDDVIEAALAMPNIHLDGFHFHSISNNLDSNLHV 199

Query: 177 AMLKNIEKEFGHFITQIEWIS 197
            ++K   K+  H +  I ++S
Sbjct: 200 DVVKLYFKKQRHGLKNINFLS 220


>gi|330901748|gb|EGH33167.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. japonica
           str. M301072PT]
          Length = 209

 Score = 83.3 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 64/190 (33%), Gaps = 15/190 (7%)

Query: 2   IKT-PY--YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
           ++T P   ++ D   L  ++   +     AGV+L  A+K  +   M +T+   + G   S
Sbjct: 18  LETDPLAAFVYDLDALQQHVSEVMAALP-AGVELYYAIKANSEALMLETIAPLVSGFEIS 76

Query: 59  SLYEVMLGHEKFGGETHAYN-VAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
           S  E+         + + ++     D ++ + L N    I   +++++ + +  A++  +
Sbjct: 77  SGGEIERVMACPTRKPYVFSGPGKLDSDLRSALLNKVEAIHLESLNEIARLQQLAEQAGR 136

Query: 117 KIGLRINPSVS---------YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
              + +  +                        + L E  +    +    + G   H   
Sbjct: 137 VQPVFLRINPQLPAAQSSRLAMAGTATPFGIDEADLAEAVRRVDNASHLTLKGFHVHAMS 196

Query: 168 ENKSFLCFSA 177
              S      
Sbjct: 197 HQMSVERHEQ 206


>gi|125606503|gb|EAZ45539.1| hypothetical protein OsJ_30199 [Oryza sativa Japonica Group]
          Length = 259

 Score = 83.3 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 53/167 (31%), Gaps = 14/167 (8%)

Query: 190 ITQIEWISLGGGIHFTDKDYPVKDFC--QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTT 247
           +  +  + +GGG                   + F +   V++  EPG        TL   
Sbjct: 85  MPPMRVLDIGGGFMAGRTFDEAAAVINRALERHFGDLPCVEVIGEPGRYFAETAFTLAAR 144

Query: 248 VLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGP-------YTAMVCGR 295
           V+      +            S+   + D+ + +         G        + + V G 
Sbjct: 145 VIGKRTRGELREYWIDDGLYGSLNCILMDHYVPRPRPLAAAAAGEDTTAATTHASTVFGP 204

Query: 296 SCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
           +C + D     +    + +GD + F+D+  Y     + FNG     I
Sbjct: 205 TCDSLDTVVTGYQLPEMSVGDWLVFDDMGAYTTAAGSNFNGFATSAI 251


>gi|255019228|ref|ZP_05291354.1| hypothetical protein LmonF_18396 [Listeria monocytogenes FSL
           F2-515]
          Length = 68

 Score = 83.3 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 9/67 (13%), Positives = 19/67 (28%), Gaps = 1/67 (1%)

Query: 302 IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYND 361
           +            G+ ++      Y     + +N I  P +           +   +Y +
Sbjct: 1   MLIWDLPLPKSNAGEVLAVFCTGAYGYAMASNYNRIPRPPVVFVENGVDKLIVARETYEN 60

Query: 362 YYNN-LS 367
              N LS
Sbjct: 61  LVQNDLS 67


>gi|318086929|gb|ADV40065.1| ornithine decarboxylase [Triticum aestivum]
          Length = 334

 Score = 83.3 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 43/302 (14%), Positives = 85/302 (28%), Gaps = 15/302 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +++ +Y+ D  ++++            GV+   A+KC     +   L     G   +S  
Sbjct: 33  VRSAFYVFDLARVVDLYRGWRRAL--PGVRACYAVKCNPEPALLGALAALGAGFDCASRR 90

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           E+           +  Y    K        +     +    S+    K K      ++ L
Sbjct: 91  EIEAVLALGVQPGSIVYANPCKPEAHLEYAAEVGVSLATYDSEEEVVKVKRCHPGCELIL 150

Query: 121 RIN-PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           RI  P     +  L                  + E  NV G+ FH      +   +   +
Sbjct: 151 RIKGPDGGGPRVDLGTKYGAHEDEVMPLLRAAQREGLNVAGVSFHVGSGASNTDVYRGAI 210

Query: 180 KNIEKEFGH----FITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
           +     F       +  +  + +GGG        +          + F E   V++  EP
Sbjct: 211 EAARGVFDAAAGLGMPPMRVLDIGGGFMAGPAFDEAAAVINAALERYFGELPCVEVIGEP 270

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGPY 288
           G        T+   V+      +            ++     D+ +        P  G  
Sbjct: 271 GRYFAETAFTMAARVIGKRTRGEVREYWIDDGLYGTLSCIPMDHYVPHPRPLAVPRAGEK 330

Query: 289 TA 290
           T 
Sbjct: 331 TY 332


>gi|73974233|ref|XP_858612.1| PREDICTED: similar to Antizyme inhibitor 1 (AZI) (Ornithine
           decarboxylase antizyme inhibitor) isoform 7 [Canis
           familiaris]
          Length = 389

 Score = 82.9 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 49/343 (14%), Positives = 94/343 (27%), Gaps = 33/343 (9%)

Query: 38  CFAAWGMFDTLNQYMDGTT--SSS--LYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSN 92
              + G+ D      +          L E+ L  E     E   Y    K        + 
Sbjct: 8   ANYSVGLLDEGTNLGNVIDNYVYEHTLTEMALVQELGVSPENIIYISPCKQVSQIKYAAK 67

Query: 93  CDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152
                    +++   K      + K+ L I    +              +      +  +
Sbjct: 68  IGVNTMTCDNEVELKKIARNHPNAKVLLHIATEDNIGGEEGNMKFGTTLKNCRHLLECAK 127

Query: 153 SEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGI-HFTDKD 208
                + G+ FH +   K    +   L +    F   G F   +  + +GGG      + 
Sbjct: 128 ELDVQIIGVKFHVSSACKESQVYVHALSDARCVFDMAGEFGFTMNMLDIGGGFTGTEFQL 187

Query: 209 YPVKDFCQRL--KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE 266
             V      L    F E   ++I  EPG   V++  TL   ++       +         
Sbjct: 188 EEVNHVISPLLDVYFPEGSGIKIISEPGSYYVSSAFTLAVNIIAKKVVENDKFPSGVEKT 247

Query: 267 AHVPDYLLYQE----------------------SATIYPNTGPYTAMVCGRSCLAGDIFG 304
                  +Y                              +   +T+ + G SC   D   
Sbjct: 248 GSDEPAFMYYMNDGIYGSFASKLSEDLNTIPEVHKKYKKDEPLFTSSLWGPSCDELDQIV 307

Query: 305 EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
           E      + +GD + F+++   +++  + FN    P I     
Sbjct: 308 ESCLLPELNVGDWLIFDNMGADSLHEPSAFNDFQRPAIYYMMS 350


>gi|298712993|emb|CBJ26895.1| Ornithine decarboxylase [Ectocarpus siliculosus]
          Length = 634

 Score = 82.9 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 30/217 (13%), Positives = 59/217 (27%), Gaps = 21/217 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSLYEVM 64
           ++ +D + +L+             VK   A+KC     +   L      G   +S  E+ 
Sbjct: 94  FFAVDLECVLHKYRRWHDCFPR--VKPFYAVKCNPNSEVVRVLAATPGCGFDCASPAEMD 151

Query: 65  LGHE-KFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKL------- 114
              E         Y    KD         +   T+ F++  +L K +             
Sbjct: 152 QVLECGVDPSRIIYANPCKDLAALEHALSAGVATMTFDSKDELYKIRRLLDTRAKVSDGG 211

Query: 115 --HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE---SEIKNVNGLMFHNNCEN 169
                +   +                 +    E C + I         + G+ FH     
Sbjct: 212 LGESSVVQLVLRLRVPDSHSDCPLGEKYGAPEEACSELISLAVELRLPLVGISFHCGSGC 271

Query: 170 KSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIH 203
           ++   +   L   +  F         +  + +GGG  
Sbjct: 272 QNAQAYPEALAVAKSVFDLAAQKGVMLTLLDIGGGFP 308



 Score = 50.9 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 16/44 (36%)

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
            A+V G S L  D+         +  GD + F  +  Y  +   
Sbjct: 567 HAVVMGPSGLPTDVVARKRLPSSLGPGDWLYFSQMGAYTASIAT 610


>gi|330937820|gb|EGH41666.1| ornithine decarboxylase [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 171

 Score = 82.9 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 46/152 (30%), Gaps = 9/152 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           +TP+ +ID   +    D      +    K+  A+K   A  + + L +       +S+YE
Sbjct: 25  ETPFVVIDTDIISKAYDDLRAGFEF--AKVYYAVKANPAVEVINLLKEKGSSFDIASIYE 82

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           +        G E  +Y    K  +               ++ + L      A      + 
Sbjct: 83  LDKVLSCGVGPERMSYGNTIKKSKDIRYFYEKGVRLFATDSEADLRNIAKAAPGSKVYVR 142

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKI 151
           +    S           +R F    +   D +
Sbjct: 143 ILTEGS----TTADWPLSRKFGCQTDMAIDLL 170


>gi|169840718|ref|ZP_02873831.1| diaminopimelate decarboxylase [candidate division TM7 single-cell
           isolate TM7a]
          Length = 152

 Score = 82.9 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 50/138 (36%), Gaps = 5/138 (3%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
           KTP Y++D++ +   +D      ++   K  +  A K F   GM   +          S 
Sbjct: 13  KTPLYVMDQELIETTIDKMKEAFQSTRFKTRIAYAGKAFLTTGMIKLVESKGLDLDVVSG 72

Query: 61  YEVMLGH-EKFGGET-HAYNVAYKDCEID-AVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            E+   H   F  +  H +       EI+ AV    DTI+ +   ++ K +   ++  KK
Sbjct: 73  GELYTAHKAGFPMKRVHLHGNNKLVNEIEMAVEYGIDTIVVDNEDEIAKIEKVCKEKGKK 132

Query: 118 IGLRINPSVSYSKFILAD 135
             + +             
Sbjct: 133 QAVLVRIDPGIEAHTHHY 150


>gi|109087157|ref|XP_001083537.1| PREDICTED: antizyme inhibitor 1 isoform 6 [Macaca mulatta]
          Length = 363

 Score = 82.9 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 48/323 (14%), Positives = 91/323 (28%), Gaps = 31/323 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  K++        +     +K    +KC +A  + + L     G   SS  E+ L
Sbjct: 40  FFVGDLGKIVKKHSQWQNVVAQ--IKPFYTVKCNSAPAVLEILAALGTGFACSSKNEMAL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             E     E   Y    K        +     I    +++   K      + K+ L I  
Sbjct: 98  VQELGVSPENIIYISPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             +              +  +   +  +     + G+ FH +   K    +   L +   
Sbjct: 158 EDNIGGEEGNMKFGTTLKNCKHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARC 217

Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238
            F   G     +  + +GGG      +   V      L    F E   V+I  EPG   V
Sbjct: 218 VFDMAGEIGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDIYFPEGSGVKIISEPGSYYV 277

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE--------------------- 277
           ++  TL   ++       +                +Y                       
Sbjct: 278 SSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVYGSFASKLSEDLNTIPE 337

Query: 278 -SATIYPNTGPYTAMVCGRSCLA 299
                  +   +T+ + G SC  
Sbjct: 338 VHKKYKEDEPLFTSSLWGPSCDE 360


>gi|219363513|ref|NP_001137051.1| hypothetical protein LOC100217223 [Zea mays]
 gi|194698164|gb|ACF83166.1| unknown [Zea mays]
          Length = 168

 Score = 82.5 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 24/77 (31%), Gaps = 1/77 (1%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           +P+YL  K ++L N        +     +  A+K      +   L +   G    S  E+
Sbjct: 92  SPFYLYSKLQILRNFAAYRDALQGLRSIVGYAVKANNNLPVLRVLRELGCGAVLVSGNEL 151

Query: 64  MLGH-EKFGGETHAYNV 79
            L     F         
Sbjct: 152 RLALQAGFDPARCGSCS 168


>gi|213586305|ref|ZP_03368131.1| putative amino acid decarboxylase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 95

 Score = 82.5 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 32/86 (37%), Gaps = 7/86 (8%)

Query: 286 GPYTAMVCGRSCLAGDIF------GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
                 + G  C  GD F       EF   K   +GD ++F D   Y I  +  +N    
Sbjct: 6   HDAWIKLAGPLCDGGDYFHMGVKGEEFLLPKETHVGDIVAFLDAGAYTIESQTVYNNRPR 65

Query: 340 PTIAVKNVDGTIKAIREF-SYNDYYN 364
             + + + +G  + IR   SY D   
Sbjct: 66  TGVVMIDKNGETRLIRREDSYEDMVK 91


>gi|32473071|ref|NP_866065.1| diaminopimelate decarboxylase [Rhodopirellula baltica SH 1]
 gi|32397750|emb|CAD73751.1| probable diaminopimelate decarboxylase [Rhodopirellula baltica SH
           1]
          Length = 555

 Score = 82.1 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 50/406 (12%), Positives = 113/406 (27%), Gaps = 80/406 (19%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P  L+  + +  N++    + +  G   ++  A K     G  D   +   G  ++S 
Sbjct: 117 GSPLNLVRPRTMRRNVEELNAVARERGLDFRVFFARKANKCLGFVDEAIESNFGVDTASE 176

Query: 61  YEVMLGHEKFGG--ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E+    ++     +         D  ID  L     I  +   +L    D+A +L ++ 
Sbjct: 177 NELRQCLQQCVPAKDLICTAAIKSDSLIDLCLQQQVCIAVDNDDELQVVVDRANELGRQA 236

Query: 119 GLRINPSVSYSKFIL-ADPNRPFSRLGEKCKDKIESEIKNVNGLMFHN------------ 165
            + +       +                    ++ S    V G+ FH             
Sbjct: 237 RIALRLGGFQHEGNKLPTRFGFDVDRDCDLPQRLTSLPVMVQGIHFHLDGYDAGQRVSAL 296

Query: 166 ------------------------NCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGG- 200
                                                    ++     + + + ++  G 
Sbjct: 297 SVAMEWVERLRAVGQPVEFIDMGGGFPMSYLEEHRQWATFWKEHRRALLGERDTLTYRGH 356

Query: 201 ------------GIHFTDKDY-------------PVKDFCQRLKEFSEKYSVQIYLEPGE 235
                       G       +               +   + + +   + +VQ+  EPG 
Sbjct: 357 GLGLAIEGGRVVGQPKMYPFFQRPVRGHWLAGVLDSRIEGKTIADRLVELNVQLRCEPGR 416

Query: 236 AIVTNTTTLNTTVLDISENIKNLV---------IVDSSVEAHVPDYLLYQESATIYPNTG 286
           +I+         V    +N +               +S +  + D +L  + ++    T 
Sbjct: 417 SILDGCGLTVARVEFRKQNAEGDWLIGLSMNRTQCRTSSDDFLVDPILVPKQSSFGRATE 476

Query: 287 PYTA--MVCGRSCLAGDIFG--EFHFEKPVKIGDRISFEDVAGYNI 328
                  + G  C   ++    +  F   V+ GD I+F + AGY +
Sbjct: 477 TKPMLGYLVGAYCTESELISLRKMQFPSGVQRGDLIAFPNTAGYFM 522


>gi|241997404|ref|XP_002433351.1| ornithine decarboxylase, putative [Ixodes scapularis]
 gi|215490774|gb|EEC00415.1| ornithine decarboxylase, putative [Ixodes scapularis]
          Length = 357

 Score = 81.7 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 89/303 (29%), Gaps = 30/303 (9%)

Query: 69  KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY 128
               +   Y    K        S     +            K    + ++ LRI  + + 
Sbjct: 6   GVSPDRIVYANTIKSSSHLDFASEHGVTLMTFDCMEEL--GKISDKNARLLLRIASNETG 63

Query: 129 SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH 188
           S   + +                      V G+ FH     +    F+  +      F  
Sbjct: 64  SGITMNNKFGCRLEDAGNLLQIASFMGFKVVGIAFHVGAAYRCPDIFARSIAEARSVFDE 123

Query: 189 ---FITQIEWISLGGGI-HFTDKDYPVKDFCQRLKEFSEKYSV-----QIYLEPGEAIVT 239
                  +  + +GGG          +   C+ ++   ++Y       ++  EPG+  VT
Sbjct: 124 GIRIGHPMTVLDIGGGFTGGLRSHDKLLKLCETIRLAVDEYFPASSGVRVIAEPGQFFVT 183

Query: 240 NTTTLNTTVL-----------------DISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
           +  TL T V+                 DI  N      ++ ++   +   +  +     Y
Sbjct: 184 SAYTLVTRVVAERRKDIEISGKLLNHKDIFINESLCNCINRNLFRFMD--IGMRPLNPPY 241

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
                + + V G +C   D   +      V + + +  +++  Y +   + FNG   P +
Sbjct: 242 ERPCNFLSTVWGATCNPLDCILDKQPLFEVFVNEWLLMDNMGAYTLVGASGFNGFGFPPV 301

Query: 343 AVK 345
              
Sbjct: 302 HYV 304


>gi|296394834|ref|YP_003659718.1| Orn/DAP/Arg decarboxylase 2 [Segniliparus rotundus DSM 44985]
 gi|296181981|gb|ADG98887.1| Orn/DAP/Arg decarboxylase 2 [Segniliparus rotundus DSM 44985]
          Length = 453

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 65/403 (16%), Positives = 122/403 (30%), Gaps = 57/403 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQY-MDGTTSSSLY 61
           P++++  ++   NLD+ +   + AGV+  +    K   A             G   +S  
Sbjct: 41  PFHVVFPERFAENLDSFIRALEAAGVEGVVYYGKKANKARCFTRRCANRDGAGVDVASSA 100

Query: 62  EVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK-LHKKI 118
           E++        G +      A     +     +   I  + + +L +    AQ     +I
Sbjct: 101 ELVEALAAGVRGKDLVVTGPAKNTELLWTAARHGALIAIDALDELERTIALAQDIAGVRI 160

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI----KNVNGLMFHNNCENKSFLC 174
            LR+ P  + +     D       L    +++    +     +++G       +  S L 
Sbjct: 161 LLRVLPETNGASRFGLDTMELERALARCAEERERVRMEGFSFHLSGYAVAPRAQLSSELV 220

Query: 175 FSAMLKNIEKEFGH----------------------FITQIEWISLGGGIHFTDKDYPVK 212
              +                                   Q EW        +    +   
Sbjct: 221 DRCVQARARGLVADSVSIGGGFAMNYLEPGDWAEFMSGYQDEWFHARKKFAYFYPYHQTP 280

Query: 213 DFCQ---------------RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN 257
                               L E   K  V++ LEPG A++         V    E    
Sbjct: 281 VGADMLADILRSGLAPGYRALAEKFAKNKVRLLLEPGRALLDGCGFSVFPVQGFKERGDY 340

Query: 258 LVIVDSSVEAHVPDYL---LYQESATIYPNTGPY---TAMVCGRSCLAGDIFG--EFHFE 309
            VI    V   V        Y     ++P TG +    A   G +CL  D+    +    
Sbjct: 341 GVIAVGGVSMSVSAQWFDSEYLPDPELWPETGEHEPVPACAGGSTCLETDMLMWRKVWLA 400

Query: 310 KPVKIGDRISFEDVAGYNINRK-NWFNGINMPT-IAVKNVDGT 350
           +  + GD + + + AGY ++   + F+ + +P  I V   DG 
Sbjct: 401 RRPQFGDLLVYHNTAGYQMDFTESGFHQLPLPPKIPVMLKDGR 443


>gi|149575860|ref|XP_001506230.1| PREDICTED: similar to antizyme inhibitor 1, partial
           [Ornithorhynchus anatinus]
          Length = 301

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 85/254 (33%), Gaps = 13/254 (5%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  K++        I     +K    +KC +   + + L     G   SS  E+ L
Sbjct: 40  FFVGDLGKIVKKNSQWQNIVAQ--IKPFYTVKCNSTPAVLEILAALGTGFACSSKSEIAL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             E     E   Y    K        +     I    +++   K      + K+ L I  
Sbjct: 98  VQELGVPPENIIYVSPSKQTSQIKFAAKAGVNIMTCDNEMELKKIALNHPNAKLLLHIAT 157

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
                   ++       +      +  +     + G+ FH +   K    +   L +   
Sbjct: 158 EDISGDEEMSMKFGTTLKNCRHLLECAKELQVQIVGVKFHVSSSCKEPQVYIHALSDARC 217

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ-----IYLEPGEA 236
            F   G F  ++  + +GGG   T  ++ +++    ++   + Y  +     +  EPG  
Sbjct: 218 VFDMAGEFGFKMNILDIGGGF--TGSEFQLEEVNHVIRPLLDIYFPEGSGIKVIAEPGSY 275

Query: 237 IVTNTTTLNTTVLD 250
            V++  TL   ++ 
Sbjct: 276 YVSSAFTLAVNIIA 289


>gi|328675890|gb|AEB28565.1| Diaminopimelate decarboxylase [Francisella cf. novicida 3523]
          Length = 440

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 53/407 (13%), Positives = 121/407 (29%), Gaps = 63/407 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           P+++I  +   NNL     +  N  +  ++    K   A      + +       +S+ E
Sbjct: 32  PFHIIHPKSFTNNLSDFQKVLNNHNIVGQVYFGKKANKAGAWLTEVAKLNGAVDVASVPE 91

Query: 63  VM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           ++  L     G        A  D  +     +   +  + + +L +  +     + K+ +
Sbjct: 92  LIHTLSKGVQGKNIGVTGAAKSDELLWLAARHGALVAIDALDELERAINIVANTNDKLRI 151

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
            +      S       N           ++ +    ++    F  + +         M  
Sbjct: 152 LLRVLPPNSPNSRFGFNSKDI---VTALERCKDAKNHITMEGFSFHLDGYLVEPRVEMAF 208

Query: 181 ---NIEKEFGHFITQIEWISLGGGIHFTD-KDYPVKDFCQR------------------- 217
              +   +   +      IS+GGG   +  ++    +F                      
Sbjct: 209 ILIDWCIKAKEYGFPSSSISIGGGFACSYVEEEDWHNFKAAYSPDQFHASKTFSHFYPYY 268

Query: 218 ---------------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                                L        +Q+YLEPG A++         V    +N +
Sbjct: 269 QSPTGADMLNAILESSIGNISLANKLIDTQIQLYLEPGRALLDGAGMTVFPVQGFKKNDE 328

Query: 257 NLVIVDSSVEAHVPDYLLYQESATI--------YPNTGPYTAMVCGRSCLAGDIF--GEF 306
           + ++  + +   + +     E                 P    + G SC+  D+    + 
Sbjct: 329 HGIVTVAGLSMSLSEQWKNSEFLPTPILVQRGQLRPQNPVFVAIGGSSCMEYDMLTWRKI 388

Query: 307 HFEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPTIAVKN-VDGTI 351
                 + GD I + + AGY +++  + F+ + +P   V    DG  
Sbjct: 389 KLPAEPRYGDLIIYPNTAGYQMDKNESEFHQLPLPPKVVVTQQDGEF 435


>gi|207093374|ref|ZP_03241161.1| carboxynorspermidine decarboxylase [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 159

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 53/153 (34%), Positives = 81/153 (52%), Gaps = 15/153 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP Y+++ ++L  N      +R+ +G K+LLALK +A W  F  L Q ++G  +S LY
Sbjct: 7   IPTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLY 66

Query: 62  EVMLGHEKFGG-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQ 112
           E  L  E+FGG     E   Y+ A+K+ E+ A+L    +IIFN+  Q     ++  DK +
Sbjct: 67  EAKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNK 126

Query: 113 KL------HKKIGLRINPSVSYSKFILADPNRP 139
           +L        K+GLRINP  S     + +P   
Sbjct: 127 QLESLGLSPIKMGLRINPLYSEVTPAIYNPCSK 159


>gi|302517698|ref|ZP_07270040.1| diaminopimelate decarboxylase [Streptomyces sp. SPB78]
 gi|302426593|gb|EFK98408.1| diaminopimelate decarboxylase [Streptomyces sp. SPB78]
          Length = 480

 Score = 81.0 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 49/151 (32%), Gaps = 6/151 (3%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP Y++D+ ++            +AG  +  A K F    +   L++   G    S  E
Sbjct: 41  GTPLYVLDEDQVRARARAYRAAFPDAG--VHYAAKAFLCRALVRWLDEEDIGLDVCSAGE 98

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQK-LHKKI 118
           + L     F  +    +   K     A         ++ + V ++ +          +++
Sbjct: 99  LELAVAAGFPADRVLLHGNAKSPRDLASALRLGVGRVVLDGVGEITRLAALVPPGERQRV 158

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKD 149
            +R+ P +S              + G    D
Sbjct: 159 LVRVVPGISAGHHDKVRTGDEDQKFGLSLTD 189


>gi|196013978|ref|XP_002116849.1| hypothetical protein TRIADDRAFT_60904 [Trichoplax adhaerens]
 gi|190580567|gb|EDV20649.1| hypothetical protein TRIADDRAFT_60904 [Trichoplax adhaerens]
          Length = 397

 Score = 81.0 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 45/324 (13%), Positives = 85/324 (26%), Gaps = 58/324 (17%)

Query: 70  FGGETHAYNVAYK--DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVS 127
              +   Y+   K       A+      + F++  +L + K         + L+++ S +
Sbjct: 62  VKNDNIIYSNPCKGLSHLKVALKKGITLMTFDSEGELQRIKRMVPHAKLLLRLKVDDSKA 121

Query: 128 YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG 187
                          L             NV G+ FH          F+  ++  +K F 
Sbjct: 122 AFPLGAKYGVPFSRVL--HLFKVARKLSLNVIGISFHVGSGCDDPDSFTKAIEKSKKAFN 179

Query: 188 ---HFITQIEWISLGGGIHFT-------------------------------DKDYPVKD 213
                   +  + +GGG                                           
Sbjct: 180 LAKEIGLDLTLLDIGGGYPGIEDTLFENVKRDLLIPRLIILICMSDLMAKALYFQVCGAI 239

Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD--------ISENIKNLVIVDSSV 265
                K F  +  V+I  EPG+   T++  L T V+         +              
Sbjct: 240 TEALDKYFPTECGVEIIAEPGKYFTTSSMILVTNVIGKRLRYDDNVKTEQNQSHKESMEC 299

Query: 266 EAHVPDYLLY----------QESATIYPNTGP--YTAMVCGRSCLAGDIFGEFHFEKPVK 313
             H+ D L                 +  +     + + + G +C   D          ++
Sbjct: 300 MYHINDGLHGSFLRRLFTKEPFIPNVLKSKSGQFHRSSIWGPTCNGLDCIASGQTIPEME 359

Query: 314 IGDRISFEDVAGYNINRKNWFNGI 337
            GD   FE++  Y     + FNG 
Sbjct: 360 AGDWTYFENLGAYASAASSNFNGF 383


>gi|170596393|ref|XP_001902748.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain
           containing protein [Brugia malayi]
 gi|158589386|gb|EDP28402.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain
           containing protein [Brugia malayi]
          Length = 475

 Score = 81.0 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 44/356 (12%), Positives = 101/356 (28%), Gaps = 35/356 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTL-NQYMDGTTSSSLYEV 63
           P+++++ + + + L+     +K   +K   AL+C +   +   L      G   S+ YEV
Sbjct: 57  PFFVMNVELVDDILENW--FKKMPDIKPYYALRCNSDNVLLKLLTRNTNMGLCCSNRYEV 114

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
            +  +    +   Y               CD       ++ +  +         I LR+ 
Sbjct: 115 EMAMKFVNVDRIIYRNPLWTRGSIRHAKECDIQTVIIETEDDLKRFAMYYPEADIILRVT 174

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
                    L + N    +     +    S    + G+         + + +S  +    
Sbjct: 175 MDRKIISDPLMEDNLDIEKAIHLLRTAKNSS-VRIRGISLSVRLVCATPMLYSYAIAQCR 233

Query: 184 KEFG---HFITQIEWISLGGGIHFTD--KDYPVKDFCQRLKEFSEKYSV-------QIYL 231
           + F        +++ + +G G                + L      +         +I  
Sbjct: 234 RLFDIGLEVGHKMDILDVGDGFPCMTTVDGLSFDQIAKSLNVALAHFFPSKFFKDLKIIA 293

Query: 232 EPGEAIVTNTTTLNTTVL------------------DISENIKNLVIVDSSVEAHVPDYL 273
           EP         +L T V+                   +    +       +    +  + 
Sbjct: 294 EPSYYFAAFPFSLITRVINKRFIDGSFLTNDESDAGAVGYIYQINEGFYGAFGCKLLTHR 353

Query: 274 LYQESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
               S  I+      T   + G      D+        P+++GD + +  +  Y I
Sbjct: 354 NPTCSPLIFFGEKRNTHAAIIGPESCDTDVILSLTRLPPLQVGDWLIWHHMGAYTI 409


>gi|86651670|gb|ABD14423.1| ornithine decarboxylase 1 [Homo sapiens]
          Length = 154

 Score = 81.0 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 46/153 (30%), Gaps = 1/153 (0%)

Query: 19  DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAY 77
               +++    V    A+KC  +  +  TL     G   +S  E+ L        E   Y
Sbjct: 2   KHLRWLKALPRVTPFYAVKCNDSKAIVKTLAATGTGFDCASKTEIQLVQSLGVPPERIIY 61

Query: 78  NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPN 137
               K        +N    +    S++   K        K+ LRI    S +   L    
Sbjct: 62  ANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIATDDSKAVCRLNVKF 121

Query: 138 RPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170
               R      ++ +    +V G+ FH      
Sbjct: 122 GATLRTSRLLLERAKELNIDVVGVSFHVGSGCT 154


>gi|307321615|ref|ZP_07601007.1| Orn/DAP/Arg decarboxylase 2 [Sinorhizobium meliloti AK83]
 gi|306892714|gb|EFN23508.1| Orn/DAP/Arg decarboxylase 2 [Sinorhizobium meliloti AK83]
          Length = 457

 Score = 81.0 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 56/411 (13%), Positives = 98/411 (23%), Gaps = 68/411 (16%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P  LI    L  NL               +    K   + G+         G   SS+
Sbjct: 39  GSPLNLIWPGTLQENLAALEGALVDNRVAHAIYYGAKVNKSPGLMQAALAAGAGLDVSSV 98

Query: 61  YEVMLGHE-KFGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           YE+         G        A        +L     I  ++  +L              
Sbjct: 99  YELRDARRLGADGARLVATGPAKTRAFHQELLDCEALISVDSPEELEDLVALLPADAAPQ 158

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS-A 177
            + +           +    P   +               +GL FH +         +  
Sbjct: 159 PILLRLQ--PQDQKKSRFGMPADAVVHCLARLSGENRLRFDGLHFHLSGYRWETRLAALN 216

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY------- 230
              ++             I +GGG+     D   K       +  E Y            
Sbjct: 217 QAADLIAGARRMGFSPAMIDIGGGLPVQYVDEA-KYQAHLAAQRPEDYRTGTIPDSFYPY 275

Query: 231 ------------------------------------LEPGEAIVTNTTTLNTTVLDISEN 254
                                               +EPG A+          +L +   
Sbjct: 276 GGALSAADWLRQLLQAEMSDGRSVATYFAQEALTLAMEPGRALADQAAISVFRILRVKAL 335

Query: 255 IKNLVIVD------------SSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDI 302
             +  ++              + E  +   L+    A     + P  A + G SCL  D+
Sbjct: 336 GPDAHVIFLEGGSFSACETWFASEFLIDPILVPATRA--AAQSAPIRAYLAGHSCLDEDV 393

Query: 303 FGEFH--FEKPVKIGDRISFEDVAGYNIN-RKNWFNGINMPTIAVKNVDGT 350
                  F      GD + + +  GY ++  +N F+   MP       D  
Sbjct: 394 ISNRWLTFPTAPGAGDLLVYANTGGYQMDLLENEFHRHPMPARFCVTNDAE 444


>gi|156340084|ref|XP_001620348.1| hypothetical protein NEMVEDRAFT_v1g148439 [Nematostella vectensis]
 gi|156205145|gb|EDO28248.1| predicted protein [Nematostella vectensis]
          Length = 166

 Score = 81.0 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 37/98 (37%), Gaps = 4/98 (4%)

Query: 250 DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFE 309
            +++ +           AHV   L  +           Y++ + G +C   D   E    
Sbjct: 69  YVNDGVYGSFNCILFDHAHVKPVLTKKPKPD----ESFYSSSIWGPTCDGLDRIVERFDL 124

Query: 310 KPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
             +++GD + FE++  Y +   + FNG   PT+     
Sbjct: 125 PELQVGDWMLFENMGAYTVAASSTFNGFQRPTLYYVMS 162


>gi|90079227|dbj|BAE89293.1| unnamed protein product [Macaca fascicularis]
          Length = 354

 Score = 80.6 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 44/307 (14%), Positives = 84/307 (27%), Gaps = 28/307 (9%)

Query: 69  KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY 128
               E   Y    K        +     I    +++   K      + K+ L I    + 
Sbjct: 8   GVSPENIIYISPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIATEDNI 67

Query: 129 SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF-- 186
                        +  +   +  +     + G+ FH +   K    +   L +    F  
Sbjct: 68  GGEEGNMKFGTTLKNCKHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARCVFDM 127

Query: 187 -GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIVTNTT 242
            G     +  + +GGG      +   V      L    F E   V+I  EPG   V++  
Sbjct: 128 AGEIGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDIYFPEGSGVEIISEPGSYYVSSAF 187

Query: 243 TLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE----------------------SAT 280
           TL   ++       +                +Y                           
Sbjct: 188 TLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVYGSFASKLSEDLNTIPEVHKK 247

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              +   +T+ + G SC   D   E      + +GD + F+++   + +  + FN    P
Sbjct: 248 YKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSFHEPSAFNDFQRP 307

Query: 341 TIAVKNV 347
            I     
Sbjct: 308 AIYYMMS 314


>gi|325849897|ref|ZP_08170936.1| hypothetical protein HMPREF9246_0184 [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325479921|gb|EGC83004.1| hypothetical protein HMPREF9246_0184 [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 72

 Score = 80.6 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 9/63 (14%), Positives = 18/63 (28%)

Query: 303 FGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
             E      V+  D +       Y  +  + +N +  P +          A++  S  D 
Sbjct: 1   MIEKVKLAKVERDDLLLVLFAGAYTYSMSSNYNKLLKPAVVFVEDGKDYCAVKRQSLEDL 60

Query: 363 YNN 365
              
Sbjct: 61  IKR 63


>gi|147772643|emb|CAN73820.1| hypothetical protein VITISV_034956 [Vitis vinifera]
          Length = 167

 Score = 80.2 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 24/69 (34%), Gaps = 1/69 (1%)

Query: 5  PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
          P+YL  K ++  N +      +   + +  A+K      + + L +   G    S  E+ 
Sbjct: 2  PFYLYSKPQITRNFEAYKEALEGLRLIIGYAVKANNNLKILEHLRELGCGAVLVSGNELR 61

Query: 65 LG-HEKFGG 72
                F  
Sbjct: 62 FAFRAGFDP 70



 Score = 66.3 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 19/51 (37%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGT 55
           P+YL  K ++  N +      +     +  A+K      + + L +   G 
Sbjct: 102 PFYLYSKPQITRNFEAYKEALEGLRSIIGYAIKANNNLKILEHLKELGCGA 152


>gi|213646793|ref|ZP_03376846.1| putative amino acid decarboxylase [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
          Length = 172

 Score = 80.2 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 45/127 (35%), Gaps = 4/127 (3%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            TP+Y+  + +++ N+             K   A K  +  G+   +        ++S Y
Sbjct: 45  PTPFYVFSEPEIIRNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQY 104

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKI 118
           EV    E  F G+   +N   K           D   I  +++ +L      ++KL K  
Sbjct: 105 EVRKCLEIGFRGDQIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVA 164

Query: 119 GLRINPS 125
            + +   
Sbjct: 165 NVCVRVE 171


>gi|73949909|ref|XP_863982.1| PREDICTED: similar to ornithine decarboxylase-like protein isoform
           2 [Canis familiaris]
          Length = 365

 Score = 80.2 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 43/300 (14%), Positives = 91/300 (30%), Gaps = 30/300 (10%)

Query: 67  HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSV 126
                     Y    K        +     + +  +++   K        K+ L I    
Sbjct: 6   RIGVPASKIVYANPCKQIAQIKYAAKHGVRLLSFDNEVELAKVVKSHPSAKMVLCIATDD 65

Query: 127 SYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF 186
           S+S   L+       +      +  +     V G+ FH          ++  + +    F
Sbjct: 66  SHSLSHLSFKFGASLKSCRHLLENAKRSHVEVVGVSFHVGSGCPDLHAYTQSIADARLVF 125

Query: 187 ---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPGEAI 237
                   ++  + LGGG    +      +    +        F E   V I    G   
Sbjct: 126 EMGAELGHRMHILDLGGGFPGLEGAKVRFEEIATVINSALDLYFPEGCGVDILARLGRYY 185

Query: 238 VTNTTTLNTTVL-------DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP--- 287
           VT+  TL  +++       D     +       ++  H+ + +    ++ ++ NT P   
Sbjct: 186 VTSAFTLAVSIIAKKEVLLDQPGREEETGSTPKTIVYHLGEGVYGIFNSVLFDNTCPTPI 245

Query: 288 -----------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                      Y++ + G      D   E  +   + +GD + FE++  Y +   + F G
Sbjct: 246 LQKKSSTEQPLYSSSLWGPVADGSDCVAEGLWLPQLHVGDWLVFENMGAYTVGMGSLFGG 305


>gi|323332699|gb|EGA74104.1| Spe1p [Saccharomyces cerevisiae AWRI796]
          Length = 291

 Score = 79.8 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 47/280 (16%), Positives = 83/280 (29%), Gaps = 36/280 (12%)

Query: 105 NKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFH 164
              K K      ++ LRI    S ++  L+          +     I+    N+ G+ FH
Sbjct: 10  ELHKIKKFHPESQLLLRIATDDSTAQCRLSTKYGCEMENVDVLLKAIKELGLNLAGVSFH 69

Query: 165 NNCENKSFLCFSAMLKNIEKEFGHF-----ITQIEWISLGGGIHFTDKDYPVKDFCQRLK 219
                  F      +++    F        +  ++ + +GGG  F             L+
Sbjct: 70  VGSGASDFTSLYKAVRDARTVFDKAASEYGLPPLKILDVGGGFQFESFKESTAVLRLALE 129

Query: 220 EFSE-KYSVQIYLEPGEAIVTNTTTLNTTVLD----------ISENIKNLVIVDSSVEAH 268
           EF      V I  EPG   V    TL + V+           I  N      ++  +  H
Sbjct: 130 EFFPVGCGVDIIAEPGRYFVATAFTLASHVIAKRKLSENEAMIYTNDGVYGNMNCILFDH 189

Query: 269 VPDYLLYQESATIYPN------------------TGPYTAMVCGRSCLAGDIFGE-FHFE 309
              +         +                      PY   + G +C   D   + ++ +
Sbjct: 190 QEPHPRTLYHNLEFHYNDFESTTAVLDSINKTRSEYPYKVSIWGPTCDGLDCIAKEYYMK 249

Query: 310 KPVKIGDRISFEDVAGYNINRKNWFNGI-NMPTIAVKNVD 348
             V +GD   F  +  Y  +    FNG      I   + +
Sbjct: 250 HDVIVGDWFYFPALGAYTSSAATQFNGFEQTADIVYIDSE 289


>gi|16552627|dbj|BAB71356.1| unnamed protein product [Homo sapiens]
 gi|21754323|dbj|BAC04489.1| unnamed protein product [Homo sapiens]
 gi|119627878|gb|EAX07473.1| arginine decarboxylase, isoform CRA_e [Homo sapiens]
 gi|119627887|gb|EAX07482.1| arginine decarboxylase, isoform CRA_e [Homo sapiens]
          Length = 365

 Score = 79.8 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 39/298 (13%), Positives = 89/298 (29%), Gaps = 34/298 (11%)

Query: 69  KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY 128
                        K        +     + +  +++   K        K+ L I    S+
Sbjct: 8   GIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKMVLCIATDDSH 67

Query: 129 SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG- 187
           S   L+       +      +  +     V G+ FH          ++  + +    F  
Sbjct: 68  SLSCLSLKFGVSLKSCRHLLENAKKHHVEVVGVSFHIGSGCPDPQAYAQSIADARLVFEM 127

Query: 188 --HFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPGEAIVT 239
                 ++  + LGGG   T+      +    +        F E   V I+ E G   VT
Sbjct: 128 GTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEGCGVDIFAELGRYYVT 187

Query: 240 NTTTLNTTVLDI-----------------------SENIKNLVIVDSSVEAHVPDYLLYQ 276
           +  T+  +++                           +     I +S +  ++    + Q
Sbjct: 188 SAFTVAVSIIAKKEVLLDQPGREEENGSTSKTIVYHLDEGVYGIFNSVLFDNICPTPILQ 247

Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
           +  +       Y++ + G +    D   E  +   + +GD + F+++  Y +   + F
Sbjct: 248 KKPSTEQP--LYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNMGAYTVGMGSPF 303


>gi|295134035|ref|YP_003584711.1| diaminopimelate decarboxylase [Zunongwangia profunda SM-A87]
 gi|294982050|gb|ADF52515.1| probable diaminopimelate decarboxylase [Zunongwangia profunda
           SM-A87]
          Length = 487

 Score = 79.8 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 66/416 (15%), Positives = 125/416 (30%), Gaps = 95/416 (22%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P  ++       N      + +N  +K  +  A K   A            G  ++S 
Sbjct: 41  GSPLNILHPASFAKNCTRFKEVFQNHDIKFGIFYARKANKAKAFVKQAFIENIGVDTASE 100

Query: 61  YEVMLGHEKFGGETHA--YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E++   +  G   H    +      ++   L N   I+ +   +     D A+K + K 
Sbjct: 101 RELLQSLQLGGDGDHLVLTSAIKTKEQVKTALQNNVPIVLDNDDECVLVNDLAEKNNCKA 160

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV-----------NGLMFHNNC 167
            +    S         +  + +SR G    D  E  +K+V            GL FH + 
Sbjct: 161 RVAFRLSG-----FYVNKKKLYSRFGFDIDDIEEYLMKHVGKDKKYNNFKVEGLHFHLDG 215

Query: 168 ENKS------FLCFSAMLKNIEKEFGHFITQI-------------EWISLG--------- 199
            +          C S + K  E +F      +             EW++           
Sbjct: 216 YSTRQRSEALLHCISLIQKLRENDFSFRFIDMGGGILINYLKHKEEWLNFDVRLKESLKG 275

Query: 200 ------------------GGIHFTDKDYPVKDFCQRLKEF-----------------SEK 224
                             G I    K YP  +     K                    +K
Sbjct: 276 KISPITFNNNGLGYRFEDGIIKGDRKTYPYFNEINSDKFLEEILKYSDQNGSSVASLLQK 335

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV----------IVDSSVEAHVPDYLL 274
            +++I +EPG ++V  +      V+   ++ K             ++ SS +  +  +++
Sbjct: 336 ENIEIRIEPGRSLVNQSGITMARVVHRKKDAKGQWLIGLEMNMSQMMSSSADFMLDPFVM 395

Query: 275 YQESATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPV-KIGDRISFEDVAGYNI 328
           Y                  G  CL  D+  +       + +IGD + F + AGY +
Sbjct: 396 YANLDQDKTEEKLVDVYFTGAYCLERDVLLKRKVTLPKLPEIGDVVVFVNTAGYMM 451


>gi|294886251|ref|XP_002771632.1| Dus1p, putative [Perkinsus marinus ATCC 50983]
 gi|239875338|gb|EER03448.1| Dus1p, putative [Perkinsus marinus ATCC 50983]
          Length = 720

 Score = 79.4 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 41/338 (12%), Positives = 86/338 (25%), Gaps = 43/338 (12%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67
           L+D  +L   +     +     +    A+KC     +  TL         +++ E+ L  
Sbjct: 47  LLDLDQLERQMKKWKELLPR--IIPYYAMKCNPEPMLVKTLYHLGCRFDCATINEMKLVK 104

Query: 68  E-----KFGGETHAYNVAY------------KDCEIDAVLSNCDTIIFNTVSQLNKFKDK 110
                       H  N                   I A     + I+ ++  ++ K    
Sbjct: 105 SILSENMGDPNAHIINEMMASHIVYANPNKLPSHLIGARDLGVEYIVADSALEIAKIAHY 164

Query: 111 AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170
                  + L    + +               +    ++ +     NV G+ FH      
Sbjct: 165 HPTAKLLLRLACVDNNAQCPMSSKFGASLGVAVNVLLEEAVN-HGLNVVGVSFHVGSGCS 223

Query: 171 SFLCFSAMLKNIEKEFG----HFITQIEWISLGGGI--------HFTDKDYPVKDFCQRL 218
                +  L +  + F      F  ++  + +GGG             K           
Sbjct: 224 DVHSITKALVDAREVFDAAASRFGMKLSILDIGGGFQGVDREGSPLNFKSMATVVNSLLD 283

Query: 219 KEFSEKYSVQIYLEPGEAIVTNT-----TTLNTTVLDISENIKNLVIVDSSVEAHVPDYL 273
             F +   V+I  EPG      +           V       + +     +   + P   
Sbjct: 284 TLFPDPDEVRIIAEPGRYEWWKSIGSPRYVTAPMVDQSELAFRMMTRKYGAQFCYTPMMH 343

Query: 274 LYQESATIYPNTGPYTA-----MVCGRSC-LAGDIFGE 305
               + +       +        +  + C   GD+  E
Sbjct: 344 AKSFATSKKYREKNFETAPGDSPLAAQFCGDDGDVIVE 381


>gi|200131|gb|AAA39848.1| ornithine decarboxylase (EC 4.1.1.17) [Mus musculus]
          Length = 142

 Score = 79.4 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 26/63 (41%)

Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344
              Y++ + G +C   D   E      + +GD + FE++  Y +   + FNG   P I  
Sbjct: 29  EKHYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTVAAASTFNGFQRPNIYY 88

Query: 345 KNV 347
              
Sbjct: 89  VMS 91


>gi|1149670|emb|CAA60230.1| lysA [Clostridium perfringens]
          Length = 160

 Score = 79.4 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 47/147 (31%), Gaps = 7/147 (4%)

Query: 8   LIDKQKLLNNLDTALYIRK--NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
             D++ + +N        K    G ++  A K F    M + +N+        S  E+  
Sbjct: 3   CYDEELVRSNCRRYYNAMKCEERGNRVTYAGKAFINMSMCNLVNEENLYLDVVSGGELYT 62

Query: 66  G-HEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGL 120
                F  E   ++   K        V       I + + +L      AQ+    +K+ L
Sbjct: 63  AYKAGFPLERIYFHGNNKSDYEIDLGVRLGIGRFIVDNIHELEVLNSIAQEYGRVQKVYL 122

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKC 147
           RI P V           +  S+ G   
Sbjct: 123 RITPGVEAHTHEYIKTGQLDSKFGFPV 149


>gi|291510152|gb|ADE10032.1| unknown [Tremella fuciformis]
          Length = 417

 Score = 79.4 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 80/265 (30%), Gaps = 19/265 (7%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           ++  D   +   +           V++  A+KC  +  +   L+        +S  EV  
Sbjct: 103 FFAADLSAVYEAVQMWRASALGERVEIFYAIKCNPSPVVLHFLSLLGLSFDCASASEVNQ 162

Query: 66  GH---EKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
                 K       +    K       A     D + F+   +L K K         + +
Sbjct: 163 VLSLPAKPDPRRIIFANPCKAPSHIRQAAQGGVDMMTFDNADELYKVKRTHPTAKLVLRI 222

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS---A 177
             + S S  +  L       +  G       +    NV G+ FH     K    FS    
Sbjct: 223 LTDDSKSLCRLGLKYGAPLSTCPGLLAT--AKQLGLNVVGVSFHVGSGCKDPAQFSDAFW 280

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-----QIYLE 232
             K +             + +GGG     +        + +++  + Y       ++  E
Sbjct: 281 RAKKVFNMAKEAGYDFSLLDIGGGF----ERETFAQMSEVVRDALDVYFPAASGVRVIAE 336

Query: 233 PGEAIVTNTTTLNTTVLDISENIKN 257
           PG  +V++  TL T+++        
Sbjct: 337 PGRFLVSSAFTLATSIIARRRAHMP 361


>gi|119627883|gb|EAX07478.1| arginine decarboxylase, isoform CRA_j [Homo sapiens]
          Length = 320

 Score = 79.4 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 39/298 (13%), Positives = 89/298 (29%), Gaps = 34/298 (11%)

Query: 69  KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY 128
                        K        +     + +  +++   K        K+ L I    S+
Sbjct: 8   GIPASKIICANPCKQIAQIKYAAKHGIQLLSFDNEMELAKVVKSHPSAKMVLCIATDDSH 67

Query: 129 SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG- 187
           S   L+       +      +  +     V G+ FH          ++  + +    F  
Sbjct: 68  SLSCLSLKFGVSLKSCRHLLENAKKHHVEVVGVSFHIGSGCPDPQAYAQSIADARLVFEM 127

Query: 188 --HFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQIYLEPGEAIVT 239
                 ++  + LGGG   T+      +    +        F E   V I+ E G   VT
Sbjct: 128 GTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEGCGVDIFAELGRYYVT 187

Query: 240 NTTTLNTTVLDI-----------------------SENIKNLVIVDSSVEAHVPDYLLYQ 276
           +  T+  +++                           +     I +S +  ++    + Q
Sbjct: 188 SAFTVAVSIIAKKEVLLDQPGREEENGSTSKTIVYHLDEGVYGIFNSVLFDNICPTPILQ 247

Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
           +  +       Y++ + G +    D   E  +   + +GD + F+++  Y +   + F
Sbjct: 248 KKPSTEQP--LYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNMGAYTVGMGSPF 303


>gi|330901814|gb|EGH33233.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. japonica
           str. M301072PT]
          Length = 185

 Score = 79.4 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 55/184 (29%), Gaps = 14/184 (7%)

Query: 183 EKEFGHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKYSVQIYL--EPGEAI 237
            K       Q+   ++GGGI       + +  +  C+ L++   +      L  EPG  I
Sbjct: 1   WKALARDPGQLTHFNVGGGIGVDYLNSQQFDWQRLCRYLEKRLGEQHDAPILRFEPGRFI 60

Query: 238 VTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPNTGPYT------- 289
                     VLD   +     +V                +   I+  T P +       
Sbjct: 61  SAYCGYYAIEVLDSKTSHGEHFLVCRGGTHQFRLPVAQSHDHPVIHLPTAPQSTDSSEQA 120

Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIAVKNVD 348
             + G+ C   D+       K V IGD +       Y  N  +  F     P+       
Sbjct: 121 YTIVGQLCTPKDVLSRRQPLKGVNIGDLLVLPLAGAYGYNISHADFLCHPRPSQHFVRNG 180

Query: 349 GTIK 352
             ++
Sbjct: 181 ERVR 184


>gi|196014088|ref|XP_002116904.1| hypothetical protein TRIADDRAFT_60920 [Trichoplax adhaerens]
 gi|190580622|gb|EDV20704.1| hypothetical protein TRIADDRAFT_60920 [Trichoplax adhaerens]
          Length = 400

 Score = 79.4 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 48/328 (14%), Positives = 93/328 (28%), Gaps = 27/328 (8%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +Y+ +   ++  +   + +     V+   A+KC     +  TLN    G  ++S  E+  
Sbjct: 34  FYIANIGDVIYKVQRWMSLLPR--VQPFYAVKCNNDINLLATLNALGVGFDAASKNEMEA 91

Query: 66  -GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       Y    K              +    +     K K      K+ LRI  
Sbjct: 92  IVKICAHSSKVIYANPCKQISHLKFTERHGIALMTFDNVSELHKIKRCYPEAKLLLRIKI 151

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
               + + L++                     NV G+ FH          F++ ++   K
Sbjct: 152 DDFGTLYHLSEKYGVDIEDCPNQLQVARDLQLNVVGIGFHIGGGRYDGEIFASAIQLARK 211

Query: 185 EF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-----QIYLEPGEA 236
            F          + + +GGG      D   +  C ++++  ++Y       +I  EPG  
Sbjct: 212 AFHYGKSIGYNFDILDIGGGFP-GYADAKFETICAKIRQALDEYFPIEDQVKIMSEPGRY 270

Query: 237 IVTNTTTLNTTVLDIS---------------ENIKNLVIVDSSVEAHVPDYLLYQESATI 281
                  L   V+                          +  S    + D+         
Sbjct: 271 FAERAFHLVMDVIGKREINAKELTAQGEQKKYAYYVNESLHGSFGNVLHDFDNQSFLPVS 330

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFE 309
               G +++ V G SC   D   +    
Sbjct: 331 KSLEGLFSSTVWGYSCSGLDYLLKECQL 358


>gi|302554822|ref|ZP_07307164.1| orn/DAP/Arg decarboxylase 2 [Streptomyces viridochromogenes DSM
           40736]
 gi|302472440|gb|EFL35533.1| orn/DAP/Arg decarboxylase 2 [Streptomyces viridochromogenes DSM
           40736]
          Length = 500

 Score = 79.4 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 24/226 (10%), Positives = 65/226 (28%), Gaps = 13/226 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           + +P +++   ++  NL+    + +   +  ++  A K   +  +   L     G   +S
Sbjct: 45  LGSPLHVVVPDQIAENLERFRSVYRAHHLSGQVFYAHKANRSSALLRRLAATDAGVDVAS 104

Query: 60  LYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           L E+       F  +            +        T+  +   +L++     +      
Sbjct: 105 LGELQHALGAGFTADRITATGPKNPEFLWLAARTGVTVSVDGTDELDQLASLVRTFGLAP 164

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172
            +R+   +S  +          SR G   ++       +E     V       + +    
Sbjct: 165 -VRVLLRLSGFEASGVKVLSRRSRFGTPVRELDTLLKSVERHGDAVELTGVGYHLDTTGI 223

Query: 173 LCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFC 215
              +  L+              +   + +GGG   +      +   
Sbjct: 224 AEKATALEGSLAALEACRSRGLRPRAVDVGGGFGVSYLAEREQWEA 269



 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 39/118 (33%), Gaps = 15/118 (12%)

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN-----------LVIVDSSVEAHVPDY 272
           ++   ++ EPG A++         VL++                   I        +   
Sbjct: 342 EHLYDLHTEPGRALLDQCGLSLARVLEVRGPEPGGELLVRLAAKADDIALEDHGVLMDPV 401

Query: 273 LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFH--FEKPVKIGDRISFEDVAGYNI 328
           ++    +   P  GP    + G  CL  D+         +    GD ++F + AGY +
Sbjct: 402 VV--PRSGAGPGEGPVAVHLFGGLCLETDLITRRTVFLPRRPDPGDLLAFANTAGYAM 457


>gi|25141365|ref|NP_740833.1| hypothetical protein F53F10.2 [Caenorhabditis elegans]
 gi|1943769|gb|AAB52428.1| Hypothetical protein F53F10.2a [Caenorhabditis elegans]
          Length = 477

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/353 (11%), Positives = 94/353 (26%), Gaps = 35/353 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSLYEV 63
           P++++D   +   L+    +     V+   A+ C A   +   L+  +D     S+  E+
Sbjct: 56  PFFVMDVAAIERRLEALRVMLPR--VRPNYAVACNADPVLARVLSNNIDVNFEVSNTAEL 113

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
            L           +       +            F   S+             +I L + 
Sbjct: 114 ELVSMNVEPSRAVFCSQLMTRKAIKNAVLAGCSTFVVESEKQVTDVMNASPEAEIILAVC 173

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
              S  +              E+  D       NV G+              +++     
Sbjct: 174 LPYSTGEVP----FGCSVDEIEEILDMAHLLGANVTGIYLELGLRATLEDYITSVHDARS 229

Query: 184 KE--FGHFITQIEWISLG-------GGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
                      +  +  G             ++     +    + +   + ++      G
Sbjct: 230 IFETADQKFLTLRRVCFGNLSVPTGADGAVNNEFMSFCNSLNNVIDDLFESNIDFSASIG 289

Query: 235 EAIVTNTTTLNTTVLD-----------------ISENIKNLVIVDSSVEAHVPDYLLYQE 277
             +VTN  TL T V+                  +    +    V  S      D     +
Sbjct: 290 RFLVTNAFTLCTNVIGKRAMDAKFITNDDFDDGVGFVYQTNDGVYGSFGCKQMDIKPLCK 349

Query: 278 SATIYPNTGPYTAM--VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
              +  ++        + G +    D+       + +++G+ + +E +  + I
Sbjct: 350 PLDVENDSEEQLHFGTILGPTLDGTDVAQRLMKSRQLRVGEWLVWEQMGAFTI 402


>gi|238898933|ref|YP_002924615.1| putative lysine/ornithine decarboxylase [Candidatus Hamiltonella
           defensa 5AT (Acyrthosiphon pisum)]
 gi|229466693|gb|ACQ68467.1| putative lysine/ornithine decarboxylase [Candidatus Hamiltonella
           defensa 5AT (Acyrthosiphon pisum)]
          Length = 269

 Score = 78.3 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 71/224 (31%), Gaps = 7/224 (3%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            +P  LI  + L NNL       +      +  A+K   +  + ++  +   G   SSLY
Sbjct: 17  GSPLNLIWPENLHNNLTALRKALQQLHRHLIFYAVKVNKSQALPESAAKSGIGADVSSLY 76

Query: 62  EVMLGHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+    +          +  +     +  ++++   I  ++  +  + K     +     
Sbjct: 77  EMRAARKSGIPYSKICASGPSKTSIFLTDLITHDACISIDSTEEFEEIKALIAHIQPAHQ 136

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIE-SEIKNVNGLMFHN-NCENKSFLCFSA 177
           +R+      S   ++        L           +  +  G  FH    + K+ +    
Sbjct: 137 VRVLLRYRPSFLPISRFGMKSEDLSLCLDKLASLKKQCHFLGFHFHLSGYDCKTRIEAIR 196

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEF 221
            L  +         + + +++GGG+               LKE 
Sbjct: 197 ELHPMITRAQSLGIKAQIMNIGGGLPVQYV--DQHKSQAYLKEH 238


>gi|326331313|ref|ZP_08197605.1| Orn/DAP/Arg decarboxylase 2 [Nocardioidaceae bacterium Broad-1]
 gi|325950946|gb|EGD42994.1| Orn/DAP/Arg decarboxylase 2 [Nocardioidaceae bacterium Broad-1]
          Length = 457

 Score = 78.3 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 49/417 (11%), Positives = 108/417 (25%), Gaps = 58/417 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P +++  Q +  N  +   + +       +  A K  A+  +         G   +S 
Sbjct: 33  GSPLHVVFPQVMAENAASLKAVLRRHAVPHDVFYAHKVNASTALVAEAAAAGLGVDVASS 92

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E+       F  +            I  + S   T   + + +L++    A        
Sbjct: 93  AELDRALAAGFAPDWIEATGPKSPAFIQRIASLGVTTNADDLWELDRLAAAAPAGSTVPV 152

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC------------ 167
           L      +      +      +      +    +    + G+ FH +             
Sbjct: 153 LLRLSGFASPLVPPSRFGIDLADADAALETVRRAPGLELRGVAFHLDTADPAARVDALTE 212

Query: 168 ------------------------------ENKSFLCFSAMLKNIEKEFGHFITQI--EW 195
                                         + + F  ++  L     E       +    
Sbjct: 213 SMAVVSAAYRKGLRPSVVDIGGGFRQRFVEDPEPFQRYAQALAAGPGELVWPGHDVVAPA 272

Query: 196 ISLGGGIHFTDKDYPVKDFCQR----LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251
               G      +        +     + E   +    +++EPG+A+V +       VL  
Sbjct: 273 AHKYGNHRPMTEVLDRFLAAEIERRPVAEVLRECMFTLWIEPGKALVDHAGITLAEVLYR 332

Query: 252 SENIKNLVIVDSSVEAHVPDY-LLYQESATIYPNTGPYT---AMVCGRSCLAGDIFGEFH 307
                  ++V       V            +    G        + GR CL  D+     
Sbjct: 333 KRAAGRELVVLDLSRNQVTPADQEVLLDPVLVDGHGDPPDGGVFLGGRLCLESDLISRRK 392

Query: 308 --FEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPTIAVKNVDGTIKAIREFSYND 361
              +   + GD ++F + A Y ++   +   G   P      +DG        ++ D
Sbjct: 393 VFLDAEPRSGDVLAFVNTAAYQMDLSASAAAGHAPPPKVAAVLDGDRFTFTADTFAD 449


>gi|170049415|ref|XP_001855922.1| ornithine decarboxylase [Culex quinquefasciatus]
 gi|167871261|gb|EDS34644.1| ornithine decarboxylase [Culex quinquefasciatus]
          Length = 304

 Score = 78.3 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 27/58 (46%)

Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
           ++  + G +C + D+       + ++IGD + F+D+  Y       FNG   P + V 
Sbjct: 224 FSTTLWGPTCDSTDLILSGMAMEELQIGDFLVFDDMGAYGTVLATSFNGFAKPKVMVY 281


>gi|91773808|ref|YP_566500.1| Orn/DAP/Arg decarboxylase 2 [Methanococcoides burtonii DSM 6242]
 gi|91712823|gb|ABE52750.1| Diaminopimelate decarboxylase [Methanococcoides burtonii DSM 6242]
          Length = 349

 Score = 78.3 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 46/345 (13%), Positives = 105/345 (30%), Gaps = 24/345 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGT-TSSSL 60
           I  P + + K+ +L        +       +  + K      +   +    DG  +    
Sbjct: 5   IPAPRFTLSKKIILEQYHKVKDVADI----VAFSSKTNP--KVSPLIEAETDGLLSVHMP 58

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDA-VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E+   H +          A+    I         +   +    L+           KI 
Sbjct: 59  NELK--HTEDMSRVLFLAQAWTPEMIRELYEKGIRSFAVDNEFDLDTLLSTVDDTDWKIT 116

Query: 120 LRINP---SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
           L +       S               + ++      ++     G+ FH   +N +     
Sbjct: 117 LLLRLKLKEHSIRTERYFVFGMSSDTINKRIAQLKGNKNIEKLGVHFHRKTQNVNEWKIQ 176

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP------VKDFCQRLKEFSEKYSVQIY 230
             +++        +  I+ +++GGG+     +        +      L+E+  +  +++ 
Sbjct: 177 PEIEDALT--EGTLEAIDILNIGGGLPSEYANTNVDVINGIFRRISELREWLHEKEIKLM 234

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA 290
           +EPG  I      L + +  + +N   +     + +       +         N      
Sbjct: 235 IEPGRFISAPAGKLVSHITGVYDNNIIVNASVYNSDMDAILVPVKLRIEGEVGNDSGEPY 294

Query: 291 MVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWF 334
           +V G +  + D+F    + K   KIGD + F +   YN    + F
Sbjct: 295 VVKGCTPCSMDLFRYRVYLKDEPKIGDELVFINAGAYNF--WSNF 337


>gi|32471477|ref|NP_864470.1| diaminopimelate decarboxylase [Rhodopirellula baltica SH 1]
 gi|32443318|emb|CAD72149.1| hypothetical 49.9 kDa protein Y4YA-putative diaminopimelate
           decarboxylase [Rhodopirellula baltica SH 1]
          Length = 489

 Score = 78.3 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/411 (11%), Positives = 105/411 (25%), Gaps = 85/411 (20%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P  ++    + +N+     +   A V  ++  A K         T      G   +S 
Sbjct: 61  GSPVNVLSTDPMRSNIKDLQNVASQASVPLQIHFARKANKCAEFVRTGLMESIGFDVASE 120

Query: 61  YE--------VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-- 110
           +E          L    F               I + + +   ++ +   +L   ++   
Sbjct: 121 FEKQQTLDELYRLPQHPFDSPIVCTAAVKPVSLIRSCVLSNIVLVIDNEDELTTLRETLA 180

Query: 111 ---AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
              +     +I  R+    +    + +    P + L    +   +     V G+ FH + 
Sbjct: 181 HLGSTAPKARIAFRLQHCSAKFPDLPSRFGMPANELTLLARSLCDEPRIQVVGIHFHVHR 240

Query: 168 ENKSFLCF-----SAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------------- 206
            ++ F             ++          + W+ +GGG                     
Sbjct: 241 SDEQFSPSFTKALIDDALDVVDRVREIGHAVAWLDIGGGFPVNYLCHQKHWQRFLKEAHT 300

Query: 207 -------------------------KDYPVKDFCQRLK--------EFSEKYSVQIYLEP 233
                                      +   +    L+            +  + +  EP
Sbjct: 301 FTESSGRFEANRKLTWNQRPLKDIDPTWQPMNAADWLRAVLTSSLAYEINRRELILKCEP 360

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLV----IVDSSVEAHVPDYLLYQES----------A 279
           G A++         VL +  +         +++SS      D  L               
Sbjct: 361 GRALLDGCGLTIAEVLFVKRDQNQNHLIGLMMNSSQCRTTRDDFLVDPIVISASNESAKP 420

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFG--EFHFEKPVKIGDRISFEDVAGYNI 328
           T   +         G  C   +      F F + +  GD +   + A Y +
Sbjct: 421 TNQTDHAEIEGYFVGGYCTESEYLMQRRFRFPRGISRGDFVLIPNTAAYQM 471


>gi|90085118|dbj|BAE91300.1| unnamed protein product [Macaca fascicularis]
          Length = 358

 Score = 78.3 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 48/323 (14%), Positives = 91/323 (28%), Gaps = 31/323 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  K++        +     +K    +KC +A  + + L     G   SS  E+ L
Sbjct: 35  FFVGDLGKIVKKHSQWQNVVAQ--IKPFYTVKCSSAPAVLEILAALGTGFACSSKNEMAL 92

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
             E     E   Y    K        +     I    +++   K      + K+ L I  
Sbjct: 93  VQELGVSPENIIYISPCKQVSQIKYAAKVGVNIMTCDNEIELKKIARNHPNAKVLLHIAT 152

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             +              +  +   +  +     + G+ FH +   K    +   L +   
Sbjct: 153 EDNIGGEEGNMKFGTTLKNCKHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARC 212

Query: 185 EF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIV 238
            F   G     +  + +GGG      +   V      L    F E   V+I  EPG   V
Sbjct: 213 VFDMAGEIGFTMNMLDIGGGFTGTEFQLEEVNHVISPLLDIYFPEGSGVKIISEPGSYYV 272

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE--------------------- 277
           ++  TL   ++       +                +Y                       
Sbjct: 273 SSAFTLAVNIIAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGVYGSFASKLSEDLNTIPE 332

Query: 278 -SATIYPNTGPYTAMVCGRSCLA 299
                  +   +T+ + G SC  
Sbjct: 333 VHKKYKEDEPLFTSSLWGPSCDE 355


>gi|121602208|ref|YP_989054.1| putative microcin immunity protein [Bartonella bacilliformis KC583]
 gi|120614385|gb|ABM44986.1| putative microcin immunity protein [Bartonella bacilliformis KC583]
          Length = 586

 Score = 77.9 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/388 (12%), Positives = 117/388 (30%), Gaps = 37/388 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKN--AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           P++L D    L    T +   K       + +A+K  +       L +        S  E
Sbjct: 27  PFFLFDADNALAKAKTLISASKKYFTDSNIAVAIKSCSLGIFCKLLAEEGLNAKVCSADE 86

Query: 63  VMLGH-EKFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
             +     F  +            ++   L     I  ++VS+L K    A   +++ G+
Sbjct: 87  FQIALFAGFPNDRIILGGPLKTSEDLSFALEKDALIYVDSVSELRKLNTLAVNKNRRYGV 146

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNVNGLMFHNNCENKSF 172
            I  S           N  +SR G   ++ I          +   + G   +     +++
Sbjct: 147 GIRLSH-------FYRNGKYSRFGITKEEYINDILPILSNTDHLYLQGFHLYVGSNPENY 199

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGI--HFTDKDYPVKDFCQRLKEFSEKY----- 225
              +  L +        +     + +      +   ++Y  +   + + +    Y     
Sbjct: 200 PKITDTLHHWLPFLVEHMPSSGHLDISTDFLTNPEPENYDPETIFRSIHDVLNSYDPNLS 259

Query: 226 -SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
              ++  E    +  +++ +    L    +    +I  +     +     +  S T+  +
Sbjct: 260 KRWKLIFELDHYLNKDSSYVIGKALGYKNHYDAKIIQTNLSINWITSIHNWHHSLTLLND 319

Query: 285 TGPYTAM----VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
               +      + G +C   D      +   +  G        + YN+   N +     P
Sbjct: 320 GDKDSTQDKQILAGFNCFEDDSLSPQGYY-GLTEGQHFLIRSCSNYNMQASNEW-TRKKP 377

Query: 341 TIAVKNVDGTIKAIR---EFSYNDYYNN 365
            + +    G++   +    F+  D ++ 
Sbjct: 378 PVYIWLR-GSVLIAKISSSFTSRDLFHK 404


>gi|109495997|ref|XP_001074661.1| PREDICTED: ornithine decarboxylase 1 [Rattus norvegicus]
 gi|293341208|ref|XP_002724847.1| PREDICTED: ornithine decarboxylase-like [Rattus norvegicus]
          Length = 186

 Score = 77.9 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 47/140 (33%), Gaps = 2/140 (1%)

Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE- 277
           KE    Y +        AI+   +       + +        V  S    + D+   +  
Sbjct: 5   KEKLAAYQLPSPFACIPAILDTGSDDEEESNEQTLMYYVNDGVYGSFNCILYDHAHVKAL 64

Query: 278 -SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG 336
                 P+   Y++ +   +C   D   E      + +GD + FE++  Y +   + FNG
Sbjct: 65  LQKRPKPDEKYYSSSIWRPTCDGLDRIVERCSLPEMHVGDWMLFENMGAYTVAAASTFNG 124

Query: 337 INMPTIAVKNVDGTIKAIRE 356
              P I         + +++
Sbjct: 125 FQRPNIYYVMSRSMWQLMKQ 144


>gi|46204601|ref|ZP_00049755.2| COG0019: Diaminopimelate decarboxylase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 201

 Score = 77.9 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 19/139 (13%), Positives = 37/139 (26%), Gaps = 10/139 (7%)

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY---------LLYQES 278
           ++ LEP   +          VL + E+  +  ++      H               +  +
Sbjct: 61  RLVLEPVRYLAGPAGLYLARVLAVKESRGSRFVITDGGMHHHLAASGNLGQIVKRDFPLA 120

Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGI 337
           A +   +      V G  C   D+        P+  GD ++      Y +      F   
Sbjct: 121 AVVDAGSECTATAVVGPLCTPLDMLARAAPLPPLAEGDLVAVLQSGAYGLTASPTGFLSH 180

Query: 338 NMPTIAVKNVDGTIKAIRE 356
            MP   +            
Sbjct: 181 PMPAELLVEGGEAELIRAR 199


>gi|326435760|gb|EGD81330.1| ornithine decarboxylase [Salpingoeca sp. ATCC 50818]
          Length = 344

 Score = 77.5 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 23/57 (40%)

Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAV 344
           + + V G +C + D          + +GD + F+++  Y     + FNG  +     
Sbjct: 216 HESSVWGPTCDSIDCVQASTMLPELDVGDWLVFDNMGAYTSCAASTFNGFALTKHVY 272


>gi|38347503|emb|CAE02414.2| OSJNBa0095E20.1 [Oryza sativa Japonica Group]
          Length = 301

 Score = 77.5 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 47/163 (28%), Gaps = 15/163 (9%)

Query: 195 WISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE--------PGEAIVTNTTTLNT 246
            ++           Y  ++   ++K       + + ++        PG        TL  
Sbjct: 131 HVAFAAEAGVNVTTYDSEEEVAKVKRCHPSCELLLRIKAPDCGGVKPGRYFAETAFTLAA 190

Query: 247 TVLDISENIKNLVIV-----DSSVEAHVPDYLLYQESATIYPNTGPYTA--MVCGRSCLA 299
            V+                   S+   + D  + +         G  T    V G +C +
Sbjct: 191 RVIGKRRRGDVREYWIDDGVYGSLNCILLDSYVPRPRPLAGARPGEETHASTVFGPTCDS 250

Query: 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
            D     +    + + D + F+D+  Y     + FNG     I
Sbjct: 251 IDTVVTGYQLPEMSVDDWLVFDDMGAYTTAAGSSFNGFATSAI 293



 Score = 59.8 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 17/155 (10%), Positives = 39/155 (25%), Gaps = 5/155 (3%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           ++++D  K+++            GV+   A+KC     +   L     G   +S  E+  
Sbjct: 52  FHVLDLAKVVDLYAGWRRAL--PGVRPFYAVKCNPDTALLGALAALGAGFDCASRAEIEA 109

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       Y    K     A  +    +   T     +     +       L    
Sbjct: 110 VLALGVPPAAIVYANPCKPGAHVAFAAEAG-VNVTTYDSEEEVAKVKRCHPSCELLLRIK 168

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN 159
           +      +        +      +   +    +V 
Sbjct: 169 APD-CGGVKPGRYFAETAFTLAARVIGKRRRGDVR 202


>gi|289606991|emb|CBI60923.1| unnamed protein product [Sordaria macrospora]
          Length = 290

 Score = 77.5 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/264 (11%), Positives = 66/264 (25%), Gaps = 15/264 (5%)

Query: 87  DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEK 146
                   T   +++ +L K                    S            F     +
Sbjct: 13  AYFEHGVRTFSLDSMDELEKIVAATDGATDLTLCVRMRVSSEY--AKLSLGSKFGVGPGE 70

Query: 147 CKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHF 204
            K  + +  +  +  G+ FH   +  S   +S  ++ +          ++ I +GGG   
Sbjct: 71  AKQLLIATRQVADALGICFHVGSQTMSPDAYSNAMERVRGAIVDAGVTVDVIDVGGGFPS 130

Query: 205 TDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTT----VLDISENIKNLVI 260
                      +  +     +         E       +L       V+ +     + + 
Sbjct: 131 RYPGMTPPPLERFFETIHRAFESLPVSYSAELWAEPGRSLCAEYASVVVRVEHRRGSELF 190

Query: 261 VDSSVEAHVPDYLLYQESATIYPNTGPYT------AMVCGRSCLAGDIF-GEFHFEKPVK 313
           ++      + D         +     P +          G +C   D   G F      +
Sbjct: 191 INDGAYGSLFDAAHIGWKYPVQLLRQPESDARDMDFSFWGPTCDDIDQMQGPFPLPADTR 250

Query: 314 IGDRISFEDVAGYNINRKNWFNGI 337
            GD      +  Y    +  FNG 
Sbjct: 251 SGDYFEIGMLGAYGSAMRTAFNGF 274


>gi|150389435|ref|YP_001319484.1| Orn/DAP/Arg decarboxylase 2 [Alkaliphilus metalliredigens QYMF]
 gi|149949297|gb|ABR47825.1| Orn/DAP/Arg decarboxylase 2 [Alkaliphilus metalliredigens QYMF]
          Length = 482

 Score = 77.1 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/272 (12%), Positives = 81/272 (29%), Gaps = 16/272 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           + +P  +I  +++  N++    +     V  K+  A K   +  +    +        +S
Sbjct: 29  LGSPLNIIFPEEINQNIEEFKEVFNKHFVSGKVFYAHKTNKSNSIVRQASFEAVNIDVAS 88

Query: 60  LYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHK 116
             E+    +  F G+            I   L +      + + +L++  +   A     
Sbjct: 89  ENELKSALKNGFTGDRIEATGPKNRNFITLGLQHNIIFNIDNLQELDQVMELKKAIDFQN 148

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCK------DKIESEIKNVNGLMFHNNCENK 170
              ++I    S  K          S+ G          +K+    ++++   F  + +  
Sbjct: 149 TKKVKILLRFSGFKSESIKVLSKNSKFGIPASGIYQALEKLSQYREDIHFWGFSFHVDTI 208

Query: 171 SFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYP--VKDFCQRLKEFSEKY 225
                   ++N    F        +   + +GGG   +  +      D    LKE    Y
Sbjct: 209 DLKEKVIAIENCIDFFDIARDHDFEPRVLDIGGGFKVSYIEDAKEWNDSISYLKESILGY 268

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKN 257
              +        +     +    L+I     N
Sbjct: 269 QEGVTWNNQTFGIQQEKGVLKGTLNIYNYHDN 300



 Score = 39.0 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 38/342 (11%), Positives = 85/342 (24%), Gaps = 46/342 (13%)

Query: 16  NNLDTALYIRKNAGVKLLLALKC--FAAWGMFDTLNQYMDGTTSSSLYEV-MLGHEKFGG 72
           +NL     + +          K   F        L +   G  S S+  +          
Sbjct: 129 DNLQELDQVMELK--------KAIDFQNTKKVKILLR-FSGFKSESIKVLSKNSKFGIPA 179

Query: 73  ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK-------FKDKAQKLHKKIGLRINPS 125
                 +       + +     +   +T+    K                     R+   
Sbjct: 180 SGIYQALEKLSQYREDIHFWGFSFHVDTIDLKEKVIAIENCIDFFDIARDHDFEPRVLDI 239

Query: 126 VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKE 185
               K    +  + ++      K+ I    + V         + +        L      
Sbjct: 240 GGGFKVSYIEDAKEWNDSISYLKESILGYQEGVTWNNQTFGIQQEK-GVLKGTLNIYNYH 298

Query: 186 FGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLN 245
                 +     L   +   +         + +     +  + +++EPG+A+V       
Sbjct: 299 DNLTGPKYLDALLSTRLPKFEN--------RTIGTILSENMIDLFIEPGKALVNQLGLSA 350

Query: 246 TTVLDISENIK----------NLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGR 295
             V  I ++               +V    E  +   ++    + +            G 
Sbjct: 351 AKVNFIKQSSDDEILIGLDLKRTDVVMGDQELFIDPIII--HRSKVTDLQEDKGVYFIGN 408

Query: 296 SCLAGDIFGEFHFE--KPVKIGDRISFEDVAGYNINRKNWFN 335
            CL  D+  +      +    GD + F + AGY +     FN
Sbjct: 409 LCLESDLIFKHKIFINQLPANGDIVIFPNTAGYFM----DFN 446


>gi|297738879|emb|CBI28124.3| unnamed protein product [Vitis vinifera]
          Length = 370

 Score = 77.1 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 59/175 (33%), Gaps = 9/175 (5%)

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
              ++  K        +        I      +   D   R+K  +++  ++I  EPG  
Sbjct: 185 CKGESHLKYAASVGVNLTTFDSMQEIDKIIMWHKKCDLLLRIKAPNDEKDLKIMAEPGRF 244

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI---------YPNTGP 287
                 TL + ++      +              +   Y +S+ +         + N   
Sbjct: 245 FAETAFTLVSNIIGKRVRGEKREYWIDDGIYGSFNLPAYDKSSMMVKPLLGGSEWMNKAK 304

Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
           +++ V G +C + D+         + + D + F ++  Y  +    FNG ++ +I
Sbjct: 305 FSSTVFGPTCDSMDMVVAESQLPELHMNDVLVFYNMGAYTASAGTRFNGFDISSI 359



 Score = 74.8 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 41/141 (29%), Gaps = 7/141 (4%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y++D   ++  +D          V    A+KC     +   L         +S  E+ 
Sbjct: 110 PFYILDLGAVVRLMDMWKQAL--PNVVPYYAVKCNCQPPLITALASLGANFDCASRAEIE 167

Query: 65  LGHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                  G +   Y      +     A     +   F+++ +++K           + LR
Sbjct: 168 TVMALGVGAQQIVYANPCKGESHLKYAASVGVNLTTFDSMQEIDKI--IMWHKKCDLLLR 225

Query: 122 INPSVSYSKFILADPNRPFSR 142
           I          +      F  
Sbjct: 226 IKAPNDEKDLKIMAEPGRFFA 246


>gi|218296856|ref|ZP_03497551.1| diaminopimelate decarboxylase [Thermus aquaticus Y51MC23]
 gi|218242736|gb|EED09271.1| diaminopimelate decarboxylase [Thermus aquaticus Y51MC23]
          Length = 133

 Score = 77.1 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 30/97 (30%), Gaps = 5/97 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP+Y  D   +    +           +   ALK     G+         G  + SL E
Sbjct: 18  PTPFYAYDWTAIKKRAEAFREAFPL--ARPFFALKANPRLGLLR--RPMGYGAEAVSLGE 73

Query: 63  VMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIF 98
           V+      F  E   +N   K  E    L   + ++ 
Sbjct: 74  VLRAYRAGFSPEEVVWNGPVKTPEALEALRGREPLVV 110


>gi|221103505|ref|XP_002159193.1| PREDICTED: similar to predicted protein, partial [Hydra
           magnipapillata]
          Length = 166

 Score = 77.1 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 41/127 (32%), Gaps = 13/127 (10%)

Query: 232 EPGEAIVTNTTTLNTTVLDIS-----------ENIKNLVIVDSSVEAHVPDYLLY-QESA 279
           EPG   V +  TL   V  I                    V  S    + D+      + 
Sbjct: 2   EPGRYFVASAFTLTCNVTSIREVSTNKNSPPGFMYYLNDGVYGSFNCILFDHQSPTPLTL 61

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
               +   Y   + G +C + D   +  +   + IGD + FE++  Y I     FNG   
Sbjct: 62  HETDHCPRYKCSLWGPTCDSMDCISKDSYLPKLMIGDWLYFENMGAYTIAPSIKFNGF-K 120

Query: 340 PTIAVKN 346
           P +    
Sbjct: 121 PPVVFYM 127


>gi|29832159|ref|NP_826793.1| amino acid decarboxylase [Streptomyces avermitilis MA-4680]
 gi|29609277|dbj|BAC73328.1| putative amino acid decarboxylase [Streptomyces avermitilis
           MA-4680]
          Length = 457

 Score = 76.7 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 53/410 (12%), Positives = 110/410 (26%), Gaps = 63/410 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           P++ +       NL     +    GV   +  A K   A    +       G   +S  E
Sbjct: 39  PFHFLLPDAFDANLRALHSVLDETGVDGFVYFAKKANKAAVWAERSAAGGAGVDVASAAE 98

Query: 63  VMLGHEKFGGETH--AYNVAYKDCEIDAVLSNCDTIIFNTVSQLN-KFKDKAQKLHKKIG 119
           +           H      A     +   + +   I  + + +L+      +    +   
Sbjct: 99  LRQALGHGVRGEHLVVTGPAKDLALLGLAVRHGALIAVDALDELDTLITTVSGDRTRPAR 158

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHN-NCENKSFLCFSAM 178
           L +                    L  + +     E   + G  FH    + K     +  
Sbjct: 159 LLLRCLPPAQPHSRFGLGEAEVALALE-RCVTAGEAVRMEGFSFHLSGYDVKLRADLAGH 217

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDK---------------------------DYPV 211
           L  +  +      + + IS+GGG+  +                              YP 
Sbjct: 218 LVELCLKARVLGLEADRISIGGGLPVSYSSAADWNTFLTRQNGGHYHADRTFDPDGFYPY 277

Query: 212 KDFCQ------------------RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE 253
                                   L        + + LEPG A++         V  + +
Sbjct: 278 HSPVAGADALRRILATRPEGHRPSLAALLNDAGITLLLEPGRALLDRAGGTVFRVQGVKD 337

Query: 254 NIKNLVIVDSSVEAHVPDYLLYQES--------ATIYPNTGPYTAMVCGRSCLAGDIFGE 305
                ++  +     + +     E         A        + A V   +CL  D+   
Sbjct: 338 RDGYQLLTVNGTSLSLSEQWFNSEYLPDPHLLSAHPDTPDAVWPAAVGAATCLESDMLTW 397

Query: 306 FH--FEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPTIAVKNVDGTIK 352
               F +  + GD + + + AGY ++   + F+ + +P   V +     +
Sbjct: 398 RKVPFPRRPRTGDLLVYPNTAGYQMDSNESPFHDLALPPKVVIDHTDRAR 447


>gi|294636689|ref|ZP_06715037.1| pyridoxal-dependent decarboxylase [Edwardsiella tarda ATCC 23685]
 gi|291090098|gb|EFE22659.1| pyridoxal-dependent decarboxylase [Edwardsiella tarda ATCC 23685]
          Length = 143

 Score = 76.3 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 47/126 (37%), Gaps = 5/126 (3%)

Query: 4   TPY--YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +P+  YL D   L   +    +     G +L  A K  A   +  TL  ++DG  ++S  
Sbjct: 17  SPFCAYLYDLTALRERIADMKHRLP-IGCELFYAAKANAEAPILRTLAPWVDGFEAASGG 75

Query: 62  EVM-LGHEKFGGETHAYNVAY-KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+  L  +    +               A     D +   ++S+L +    A++  + + 
Sbjct: 76  ELAWLAQQSLDSKLLFGGPGKLTSELALACELKVDALHVESLSELQRLAMLAEQRRQVLP 135

Query: 120 LRINPS 125
           L +  +
Sbjct: 136 LLLRMN 141


>gi|47216265|emb|CAG05961.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 282

 Score = 75.9 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 64/192 (33%), Gaps = 27/192 (14%)

Query: 190 ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV-----QIYLEPGEAIVTNTTTL 244
             Q+  + +GGG+   D     ++    + E  ++Y       QI  EPG   V +  TL
Sbjct: 90  GFQLSVLDIGGGLPGKDIPVTFQECSDVINEALDEYFPLDGGVQIIAEPGRYYVESIFTL 149

Query: 245 NTTVLDIS--ENIKNLVIVDSSVEAHV------------------PDYLLYQESATIYPN 284
              V+      +         S E  +                  PDY+  +        
Sbjct: 150 AANVIAKRAVMDDVTKDEGRESTERLMMYYLNEGVYGSLNWLLTDPDYIEIKPYLHGAEE 209

Query: 285 TGPYTAM--VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
           +        + G +C   D   + +    +++GD    E +  Y+I+ +  +NG     I
Sbjct: 210 SREQRYRSVIWGPTCDCVDKIIDNYMIPDLRVGDWFLIEKIGAYSISSRTDYNGFEKAHI 269

Query: 343 AVKNVDGTIKAI 354
                + T + +
Sbjct: 270 YFAVTNETWRTL 281



 Score = 69.0 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 24/57 (42%), Gaps = 2/57 (3%)

Query: 5  PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
          P++++D   L+       ++     VK   A+KC +   +  TL+    G   +S  
Sbjct: 33 PFFVVDLDTLVQ--KHLKWLSNLPRVKPFYAVKCNSTPTVLKTLSALGTGFDCASKN 87


>gi|218678018|ref|ZP_03525915.1| diaminopimelate decarboxylase protein [Rhizobium etli CIAT 894]
          Length = 94

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 26/83 (31%), Gaps = 3/83 (3%)

Query: 32  LLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH-EKFGGETHAYNVAYKDCEID--A 88
           +  A+K  +   +  TL +   G    S  E+          E   ++   K  +    A
Sbjct: 2   VCYAMKANSNQAVLKTLGRLGAGIDVVSEGELRRALAAGIPAERIMFSGVGKTPQEMDFA 61

Query: 89  VLSNCDTIIFNTVSQLNKFKDKA 111
           + +        +  +L     +A
Sbjct: 62  LEAGIYCFNVESEPELEILNQRA 84


>gi|83944546|ref|ZP_00956997.1| probable diaminopimelate decarboxylase [Sulfitobacter sp. EE-36]
 gi|83844583|gb|EAP82469.1| probable diaminopimelate decarboxylase [Sulfitobacter sp. EE-36]
          Length = 475

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 56/423 (13%), Positives = 104/423 (24%), Gaps = 80/423 (18%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           P  +        N+        + G     + A K                G  ++S  E
Sbjct: 45  PLNIQSVDPFRRNIAQLTDCVTDYGLPFLPMFARKANKCLSYVQAARDMGIGIDTASHAE 104

Query: 63  VMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK--I 118
           V    E    G+      A      +   +    T+I +   +L   +D A+   K   +
Sbjct: 105 VEQCLEQGLPGDRIVCTAAVKDRALMTLCVGGGVTVILDNEDELELLEDVAEGATKPVSV 164

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
           GLR+N        + +    P +++         SE   ++GL FH N  +      + +
Sbjct: 165 GLRLNGFERDGTKLYSRFGFPLTQVPTLAARIAASETLRLDGLHFHLNGYSAEDRIAAIL 224

Query: 179 LKNIEKEFGHFITQIEWI-SLGGGIHFTD---KDYPVKDFCQRLKEFSEKYSVQIYLE-- 232
                       +   +   +GGGI                +  +               
Sbjct: 225 QTLPLIHKIKGDSTAPFFLDIGGGIPMNYLDDAAEWETWLAELDRALIGDRDPITQHNDG 284

Query: 233 PGEAIVTNTTTLNTTVLDISENIKN------LVIVDSSVEAHVPDYL------------- 273
            G  +       +  V                +    +V AH+ D               
Sbjct: 285 LGRKVGGEGKVDSYPVAQTLVQEDWMRRILDHMADGQTVAAHLRDAHISLRCEPGRSLLD 344

Query: 274 ------------------------------------LYQESATIYPNTGPYTAMVCGRS- 296
                                                +     + P  GP    + G   
Sbjct: 345 GCGMTLARVAFCKRDSAGTPVIGVQMNRTQSRSGFAEFALDPLMVPAPGPRKGPIEGYLA 404

Query: 297 ---CLAGDIF--GEFHFEKPVKIGDRISFEDVAGYNI----NRKNWFNGINMPTIAVKNV 347
              C   +     +  F + VK GD + F + AGY +    +R + F    +        
Sbjct: 405 GTYCTESEWLTRRKMSFPQGVKAGDLMVFPNTAGYLMHFLESRSHQF---PLARNVFVTE 461

Query: 348 DGT 350
              
Sbjct: 462 GNA 464


>gi|333015578|gb|EGK34917.1| diaminopimelate decarboxylase domain protein [Shigella flexneri
           K-227]
          Length = 176

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 40/141 (28%), Gaps = 13/141 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAALKQFEV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D      +S     +   +V  L++    +     ++
Sbjct: 82  RALAAGYNPQTHPDDIVFTADVIDQATLECVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRP 139
            LR+NP   +       P   
Sbjct: 140 WLRVNPGFGHGHSQKPIPVAK 160


>gi|296393202|ref|YP_003658086.1| Orn/DAP/Arg decarboxylase 2 [Segniliparus rotundus DSM 44985]
 gi|296180349|gb|ADG97255.1| Orn/DAP/Arg decarboxylase 2 [Segniliparus rotundus DSM 44985]
          Length = 457

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 55/423 (13%), Positives = 108/423 (25%), Gaps = 77/423 (18%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           ++L+  Q    NL     +    G  +  A K   A        +   G  ++S+ E+  
Sbjct: 43  FHLLHPQTFAANLGAFQAVSARTGGTVYFAKKANKAAAWLTVCAERGAGVDAASVPELRE 102

Query: 66  GHE-KFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                  G+       A  D  +         +  +++ +L +    A        L   
Sbjct: 103 ALRCGVPGQRVVVTGPAKSDELLLLACRAGALVAIDSLDELERAVALADGEAALRVLFRV 162

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
                                 +        +  + G  FH               + I 
Sbjct: 163 HPPRQPNSRFGMAVPERQAALVRIGQFRGRIV--LEGFSFHL-SGYDIASRAELAGELIA 219

Query: 184 KEF--GHFITQIEWISLGGGIHFTD----------------------------------- 206
           +         + + IS+GGG                                        
Sbjct: 220 ECLAARARGHRADTISIGGGFPVRYVEAEDWARFQSEFRPEQCHARKTFSDGFYPYHCDE 279

Query: 207 -------KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV 259
                  K    +     L++      + + +EPG A++ +       V           
Sbjct: 280 PGARALEKILAHQADGAALEQRLAAAGIALSVEPGRALLADAGISVFPVQGFKWREAAPN 339

Query: 260 IVDSSV------------------EAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGD 301
                                      +PD  L+  +             V G SCL  D
Sbjct: 340 EHAGGYGIATVAGTSLSLSEQWFGSEFLPDPALWPTTQHRQIT----PTCVGGASCLDSD 395

Query: 302 IFGEFH--FEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPTIAVKNVDGTIKAIREFS 358
           +         +P K GD + + + AGY ++   + F+ + +P  AV +  G       +S
Sbjct: 396 MLTWRKVPLPRPPKRGDFLIYPNTAGYQMDSNESSFHDLPIPPKAVVDFSGAEP---RWS 452

Query: 359 YND 361
           + +
Sbjct: 453 FEE 455


>gi|315226160|ref|ZP_07867948.1| conserved hypothetical protein [Parascardovia denticolens DSM
           10105]
 gi|315120292|gb|EFT83424.1| conserved hypothetical protein [Parascardovia denticolens DSM
           10105]
          Length = 258

 Score = 75.6 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 83/252 (32%), Gaps = 21/252 (8%)

Query: 127 SYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF 186
               F             E+ ++ ++S+   V  L FH      S        +  ++  
Sbjct: 9   DEGTFGKNSRFGIDP-FNEQLREYLKSQKLIVKRLHFHTG--QLSPERLLYEFEYCKRII 65

Query: 187 GHFITQIEWISLGGGIHFTDKDYPV----KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTT 242
             +   I  I  GGG +              + + + E     ++Q   EPG  ++    
Sbjct: 66  AEY-PTITTIDFGGGFYTFFAHRDRAEKVFSYIRTINEIKYANNLQFRFEPGAGLIGPFG 124

Query: 243 TLNTTVLDISENIKNLVIVDSSVEA---HVPDYLLYQESATI--YPNTGPYTAMVCGRSC 297
            L TTV+ +    +        ++    ++  +++ +         +T  + A+VCG S 
Sbjct: 125 YLVTTVVSLEHGNRYFGDDLIGLDCSAWNICPWVIPKVYHYQEARRDTEYHQAIVCGNSL 184

Query: 298 LAGDIFGEFHF--------EKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDG 349
              D FG+              +++GD+I   +V  Y       FN +  P     + + 
Sbjct: 185 YENDFFGKSQENRVPRLLVPDDLRVGDKIIITNVGAYTYTNFRNFNLLGRPEKYGYDSEE 244

Query: 350 TIKAIREFSYND 361
                R F   D
Sbjct: 245 GKDIQRVFGMKD 256


>gi|196016994|ref|XP_002118345.1| hypothetical protein TRIADDRAFT_62375 [Trichoplax adhaerens]
 gi|190579061|gb|EDV19167.1| hypothetical protein TRIADDRAFT_62375 [Trichoplax adhaerens]
          Length = 176

 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 37/105 (35%)

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
                 +++D+         V   +     D+ L           G  TA++ G++C + 
Sbjct: 50  VQYQLRSMMDMKVLYYVNDSVYGCLNILPIDHALITLKPVKSNTHGEETAVLFGQTCDSL 109

Query: 301 DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
           D   +      +  GD + FE+   Y+++  + FN    P     
Sbjct: 110 DCLMKECLLPKLNAGDWVYFEETGAYSLSLVSKFNSFKKPKCYYY 154


>gi|312972941|ref|ZP_07787114.1| diaminopimelate decarboxylase domain protein [Escherichia coli
           1827-70]
 gi|310332883|gb|EFQ00097.1| diaminopimelate decarboxylase domain protein [Escherichia coli
           1827-70]
          Length = 176

 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 40/141 (28%), Gaps = 13/141 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D Q +   +             +  A K  +   +   + +      S SL E+ 
Sbjct: 27  PVWVYDAQIIRRQIAALKQFDV-----VRFAQKACSNIHILRLMREQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D      +S     +   +V  L++    +     ++
Sbjct: 82  RALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVS--PGHRV 139

Query: 119 GLRINPSVSYSKFILADPNRP 139
            LR+NP   +       P   
Sbjct: 140 WLRVNPGFGHGHSQKPIPVAK 160


>gi|149280425|ref|ZP_01886545.1| arginine decarboxylase, biosynthetic [Pedobacter sp. BAL39]
 gi|255532214|ref|YP_003092586.1| Orn/DAP/Arg decarboxylase 2 [Pedobacter heparinus DSM 2366]
 gi|149228839|gb|EDM34238.1| arginine decarboxylase, biosynthetic [Pedobacter sp. BAL39]
 gi|255345198|gb|ACU04524.1| Orn/DAP/Arg decarboxylase 2 [Pedobacter heparinus DSM 2366]
          Length = 463

 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 53/394 (13%), Positives = 115/394 (29%), Gaps = 61/394 (15%)

Query: 12  QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY-----EVMLG 66
             + NN             K     K      + +   +      +SS +     E +  
Sbjct: 66  AIIKNNYR--------GDYKYCYCTKSSHFRHIVEEALKNGIHLETSSAFDMPMIEALEK 117

Query: 67  HEKFGGETHAYNVAYKDCEIDAVLSNCDT-------IIFNTVSQLNKFKDKAQKLHKKIG 119
                 +       +K  +    + +           + +   + N F D+  ++     
Sbjct: 118 KGALTKDITVICNGFKTYQYKQYIIDMLHDGYKNIIPVLDNKEEFNLFDDEV-EMDTPCN 176

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCK----DKIESEIKNVNGLMFHNNCENKSFLCF 175
           L I  +           +R   R+ +           +    V  L F  N        +
Sbjct: 177 LGIRIAAEEQPDSQFYTSRLGVRMEDVIDFYNNKISANPNFRVKLLHFFINSGITDSPYY 236

Query: 176 SAMLKNI---EKEFGHFITQIEWISLGGGIHFTDK-------DYPVKDFCQRLKEFSEKY 225
              L+       +F     +++ + +GGG+ F D        +Y V +  +R+KE   ++
Sbjct: 237 WNELEKYVTLYCKFKKINPELDTLDIGGGMPFKDSLVFDFDYEYMVNEIVKRIKEICAEH 296

Query: 226 S---VQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLL----YQ 276
                 I  E G+  V   + +   VL   +       +++D S   ++PD       Y 
Sbjct: 297 DVVEPDIITEFGKYTVAEASGILYKVLGRKQQNDREKWLMLDGSFITNLPDVWALNQKYI 356

Query: 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEF-----HFEKPVKIGDRISFEDVAGYNINRK 331
                  +       + G +C   D + +       F    +    + F +   Y     
Sbjct: 357 LLPINNWDAEYERVNLGGITCDGQDYYNQEAHMNSVFMPKTRKVQYLGFFNTGAYQEVL- 415

Query: 332 NWFNGI-----NMPTIAVKNVDGTIKAIREFSYN 360
           + + GI       P   +   +      R+ ++N
Sbjct: 416 SGYGGIHHCLLPSPKHVIIRRN------RDETFN 443


>gi|82541743|ref|XP_725091.1| S-adenosylmethionine decarboxylase-ornithine decarboxylase-related
            [Plasmodium yoelii yoelii str. 17XNL]
 gi|23479966|gb|EAA16656.1| S-adenosylmethionine decarboxylase-ornithine decarboxylase-related
            [Plasmodium yoelii yoelii]
          Length = 1404

 Score = 75.2 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 51/314 (16%), Positives = 98/314 (31%), Gaps = 19/314 (6%)

Query: 2    IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            I T  + I+ QK+L              V    A+K      +   L         +S+ 
Sbjct: 852  IDTSVFCINLQKILLQYIRFKRNLPR--VTPFYAVKSNDDEVVLKFLYGLNCSFDCASIG 909

Query: 62   E---VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-QKLHKK 117
            E   ++        +   Y    K           + I   T   +++ K          
Sbjct: 910  EINKLITLLPDISTDRIIYANTIKSPASLKYAKEKN-INLCTFDNIDELKKICKYHPTCS 968

Query: 118  IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
            + LRIN      K  ++          EK     +    N+ G+ FH     K+   F  
Sbjct: 969  LLLRINIDFKNYKSYMSSKYGANEFEWEKILKFGKENNMNIIGVSFHVGSNTKNIFDFCQ 1028

Query: 178  MLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
             +K   + F        +   +++GGG       YP +      K+  +K+   +  E  
Sbjct: 1029 AIKLSREVFDISHRLGFKFRILNMGGG-------YPEELEYDFAKKNEKKHYCTLNEEEL 1081

Query: 235  EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCG 294
            +  + +      +V+  + N  N   +  ++   + D+        +   + P   MV  
Sbjct: 1082 KKYIMSFL-NEKSVIKKNYNFYNFEKIALAINMSI-DHYFKDMKDQLKIISEPGRYMVAS 1139

Query: 295  RSCLAGDIFGEFHF 308
             S LA  + G+   
Sbjct: 1140 SSTLAAKVIGKRCP 1153



 Score = 62.1 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 18/47 (38%)

Query: 291  MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
             + G+SC   D+     +     I D I +E    Y     + FNG 
Sbjct: 1340 NIFGQSCDGLDMITSSTYLPECNINDWIIYEYTGAYTFVSSSNFNGF 1386


>gi|187466287|emb|CAQ51903.1| arginine decarboxylase [Mus musculus]
          Length = 322

 Score = 74.8 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 86/288 (29%), Gaps = 29/288 (10%)

Query: 69  KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY 128
                        K        +     + +  +++   K        K+ L I    S+
Sbjct: 8   GVPASKIICANPCKQVAQIKYAAKHGVRLLSFDNEVELAKVVKSHPSAKMVLCIATQDSH 67

Query: 129 SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF-- 186
           S   L+       +      +  +     V G+ FH          ++  + +    F  
Sbjct: 68  SLNHLSLRFGASLKSCRHLLENAKKSHVEVVGVSFHIGSGCPDPQAYAQSIADARLVFQM 127

Query: 187 -GHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
                  +  + LGGG    +      ++            F E   V I  E G   VT
Sbjct: 128 GEELGHTMNILDLGGGFPGLEGAKVRFEEMASVINSALDLYFPEGCGVDILAELGRYYVT 187

Query: 240 NTTTL------NTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA--- 290
           +  T+         VLD +   +       S+  H+ + +    ++ ++ NT P  A   
Sbjct: 188 SAFTVAVSIVAKREVLDQASREEQTGAAPKSIVYHLDEGVYGVFNSVLFDNTCPTPALQK 247

Query: 291 -----------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
                       + G +    D   E  +   +++GD + F+++  Y 
Sbjct: 248 KPSADQPLYSSSLWGPAVEGCDCVAEGLWLPQLQVGDWLVFDNMGAYT 295


>gi|41350895|gb|AAH65772.1| Adc protein [Mus musculus]
          Length = 405

 Score = 74.4 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 46/309 (14%), Positives = 93/309 (30%), Gaps = 35/309 (11%)

Query: 49  NQYMDGTTSSSLYEVMLG-HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF 107
            +   G     L E+ L  H              K        +     + +  +++   
Sbjct: 74  REGGRG-----LAEMELVQHIGVPASKIICANPCKQVAQIKYAAKHGVRLLSFDNEVELA 128

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
           K        K+ L I    S+S   L+       +      +  +     V G+ FH   
Sbjct: 129 KVVKSHPSAKMVLCIATQDSHSLNHLSLRFGASLKSCRHLLENAKKSHVEVVGVSFHIGS 188

Query: 168 ENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTD------KDYPVKDFCQRL 218
                  ++  + +    F         +  + LGGG    +      ++          
Sbjct: 189 GCPDPQAYAQSIADARLVFQMGEELGHTMNILDLGGGFPGLEGAKVRFEEMASVINSALD 248

Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTL------NTTVLDISENIKNLVIVDSSVEAHVPDY 272
             F E   V I  E G   VT+  T+         VLD +   +       S+  ++ + 
Sbjct: 249 LYFPEGCGVDILAELGRYYVTSAFTVAVSIVAKREVLDQASREEQTGAAPKSIVYYLDEG 308

Query: 273 LLYQESATIYPNTGPYTA--------------MVCGRSCLAGDIFGEFHFEKPVKIGDRI 318
           +    ++ ++ NT P  A               + G +    D   E  +   +++GD +
Sbjct: 309 VYGVFNSVLFDNTCPTPALQKKPSADQPLYSSSLWGPAVEGCDCVAEGLWLPQLQVGDWL 368

Query: 319 SFEDVAGYN 327
            F+++  Y 
Sbjct: 369 VFDNMGAYT 377


>gi|282866453|ref|ZP_06275497.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces sp. ACTE]
 gi|282558665|gb|EFB64223.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces sp. ACTE]
          Length = 507

 Score = 74.4 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 52/430 (12%), Positives = 101/430 (23%), Gaps = 103/430 (23%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLN---QYMDGTT 56
           + +P  ++  + +  N    L + +   +  ++  A K   +  +   L        G  
Sbjct: 34  LGSPLNVLLPEVVAENAARFLSVYRRHRLSGRVYFAHKANRSSALVRRLAGCDPAAVGVD 93

Query: 57  SSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            +SL E+       F G+            +        T+  ++  +L +     +   
Sbjct: 94  VASLGELRHVLACGFTGDRVMATGPKDPQFLWLAARVGATVNVDSADELRELAGLVRGHG 153

Query: 116 KKI-----GLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVN----- 159
                    L    S +    +        SR G    +       +E  +  V      
Sbjct: 154 LSRTRVLARLSGFESDAGYGGVGTRVLSRGSRFGTPVAEAETLWSALEEHMDAVELIGLA 213

Query: 160 -------------------------------------GLMFHNNCENKSFLCFSAMLKNI 182
                                                G  F      ++    S      
Sbjct: 214 YHLDTTGLEEKARALERCVLLMDECRERGLTPGAVDIGGGFGVGYVAEAAEWESWTTALS 273

Query: 183 EKEFG------HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE------------- 223
           E   G               + GG +  T   YP        +   E             
Sbjct: 274 EAVLGVRSPLTWRGHGYGLRAEGGTVRGTAALYPAHRTVAGPRYLDELLSRPAPALGRSP 333

Query: 224 -----KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDS--------------- 263
                ++   +Y+EPG A+V         VL++                           
Sbjct: 334 ATLLLEHLNDLYIEPGRALVDQCGVSLARVLEVRRTNDAPDRYLVRLGMNAGDVSLEEHG 393

Query: 264 ---SVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPV-KIGDRI 318
                     D               P    + G  CL  D+      +   + + GD +
Sbjct: 394 VLVDPVLLPRDGAPGGPDGDGAGGGRPVGVHLVGNLCLEADLITRRLVYLPRLPRAGDVL 453

Query: 319 SFEDVAGYNI 328
           +F + AGY +
Sbjct: 454 AFVNTAGYAM 463


>gi|156081893|ref|XP_001608439.1| S-adenosylmethionine decarboxylase-ornithine decarboxylase
            [Plasmodium vivax SaI-1]
 gi|148801010|gb|EDL42415.1| S-adenosylmethionine decarboxylase-ornithine decarboxylase, putative
            [Plasmodium vivax]
          Length = 1442

 Score = 74.4 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 64/230 (27%), Gaps = 10/230 (4%)

Query: 2    IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            I T    I+ QK+L              V    ++K      +   L         +S+ 
Sbjct: 904  IDTSVVCINLQKILAQYIRFKKNL--PSVTPFYSVKSNNDDVVIKFLYGLNCNFDCASVG 961

Query: 62   EVML---GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-QKLHKK 117
            EV        +   E   Y    K         N + I   T   + + +          
Sbjct: 962  EVKKLTTLLPELNRERIIYANTIKSINSLIFARN-EHINLCTFDNIEELRKILKYHPKCS 1020

Query: 118  IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
            + LRIN      K  ++          E           N+ G+ FH     K+   +  
Sbjct: 1021 LLLRINVDFKNYKSYMSSKYGANEHEWENILSFGRKHNLNIVGVSFHVGSNTKNLFDYCQ 1080

Query: 178  MLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
             +K     +        Q E ++LGGG     +    K   ++      +
Sbjct: 1081 AIKLSRDVWNISNKMGYQFEILNLGGGFPEELEYDSAKKNEKKKYCTLNE 1130



 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 20/58 (34%)

Query: 288  YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
            Y A + G+SC   D+     +     I D I +E    Y     + FNG         
Sbjct: 1375 YLANIFGQSCDGLDMITSITYLPECYINDWIIYEYAGAYTFVSSSNFNGFKKCQKVYI 1432


>gi|152996852|ref|YP_001341687.1| arginine decarboxylase [Marinomonas sp. MWYL1]
 gi|150837776|gb|ABR71752.1| arginine decarboxylase [Marinomonas sp. MWYL1]
          Length = 634

 Score = 74.0 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/312 (10%), Positives = 93/312 (29%), Gaps = 36/312 (11%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLN---- 49
           I  P  +     L + ++      + A           ++  +K      + + +     
Sbjct: 55  IPYPCLVRFPNILHSRIEKITNSFQQAIDYYDYQAKYAIVYPIKVNQQRRVVEEIAACQP 114

Query: 50  --QYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCE------IDAVLSNCDTIIFNT 100
                 G  + S  E+M         +       YKD E      +   + +   I+   
Sbjct: 115 DNAATVGLEAGSKPELMAVLAMHKNADGIIVCNGYKDREFIHLALMAEKMGHQVFIVVEK 174

Query: 101 VSQLNKFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEI---- 155
           + +L+   ++A K+  +  + I     S       +     S+ G      + +      
Sbjct: 175 MHELDWILEEADKIGVQPRIGIRIRLASTCTTHWGNSGGEKSKFGLTTSQLLRAIDRLRE 234

Query: 156 ----KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKD 208
                 +  + FH   +          LK   + +        +++W+ +GGG+    + 
Sbjct: 235 LDLLHCLELIHFHLGSQITRIRDIQNSLKECARYYAELHQMGVKVKWVDVGGGLGVDYEG 294

Query: 209 YPVKDFCQR---LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSV 265
              ++       + E++       +    +  + +   ++ +   ++ +   ++    S 
Sbjct: 295 TRCQNDFSANYSIGEYANNVVFAFHNVCEQYELPHPHLISESGRAVTAHHAMMIADVFSH 354

Query: 266 EAHVPDYLLYQE 277
            A +       E
Sbjct: 355 GAELLPIEEPAE 366


>gi|260829309|ref|XP_002609604.1| hypothetical protein BRAFLDRAFT_125023 [Branchiostoma floridae]
 gi|229294966|gb|EEN65614.1| hypothetical protein BRAFLDRAFT_125023 [Branchiostoma floridae]
          Length = 151

 Score = 74.0 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 37/108 (34%), Gaps = 5/108 (4%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++N      ++ +   V+   A+KC  +  +   L     G   +S  EV  
Sbjct: 41  FFVCDLGDVVNKYK--KWVSRLPRVEPFYAVKCNDSPHVLQVLANLGTGFDCASKTEVQT 98

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNC--DTIIFNTVSQLNKFKDK 110
                   +   Y    K             D + F+   +L+K K+ 
Sbjct: 99  VLNLGVAPDRIVYANPCKQTSHIRYAKKNSVDLMTFDNEDELHKIKNY 146


>gi|86158319|ref|YP_465104.1| arginine decarboxylase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774830|gb|ABC81667.1| arginine decarboxylase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 654

 Score = 74.0 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/275 (12%), Positives = 73/275 (26%), Gaps = 31/275 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKL--------LLALKCFAAWGMFDTLNQYMD--- 53
           P  +  +  L   +         A  ++        +  +K      + D +        
Sbjct: 75  PCVVRFQDVLRARVKQINEAFGKAVAEMGYGASYFGVYPIKVNQMREVVDEIVDAGAPYH 134

Query: 54  -GTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA 111
            G  + S  E+++        E       YKD E   +      +    +  + K  +  
Sbjct: 135 YGLEAGSKGELLVVLGMNADPEALTICNGYKDEEYLRLALLGRKLGRKVIVVIEKLSELP 194

Query: 112 QKLHKKIGLRINPSVS-------YSKFILADPNRPFSRLGEKCKDKIES--------EIK 156
           Q L     + ++P V                 +  F++ G    + I++        +  
Sbjct: 195 QLLRLGEEMGVDPMVGLRSKLTTRGTGKWEGSSGDFAKFGLTVPELIQAVRILKEAGKEH 254

Query: 157 NVNGLMFHNNC---ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213
               L FH      E +           +  +       IE+  +GGG+          D
Sbjct: 255 CAKLLHFHVGSQLTEIRVVKDAVNEGARVYAKLRKMGLPIEYFDVGGGLGVDYVGTRTND 314

Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248
           F   +    ++Y   +        +         V
Sbjct: 315 FASSVNYSMDEYVGDVVYNVQRVCMNEGVPEPHLV 349


>gi|324497901|gb|ADY39599.1| putative ornithine decarboxylase-like [Hottentotta judaicus]
          Length = 165

 Score = 74.0 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 41/136 (30%), Gaps = 5/136 (3%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P++++D   + +         K   +    A+KC    G+   L         +S  E+ 
Sbjct: 32  PFFIVDLTDIEHKYKLWK--LKMPRITPFYAMKCNDCPGVLQYLASMGVNFDCASKTEIE 89

Query: 65  LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
              +         Y    K       A       + F+   +L K K         I ++
Sbjct: 90  TVIKLGVDPSRIIYANPCKTRSFIKYAATVGVKMMTFDNEIELYKIKSIFPNAELIIRIK 149

Query: 122 INPSVSYSKFILADPN 137
           ++ S S+ +       
Sbjct: 150 VDDSNSHFQTQFKIWM 165


>gi|297155652|gb|ADI05364.1| putative lysine/ornithine decarboxylase [Streptomyces
           bingchenggensis BCW-1]
          Length = 500

 Score = 74.0 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/218 (11%), Positives = 66/218 (30%), Gaps = 15/218 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           + +P  ++   +L  N++    + +   +  ++ LA K   +  +   L     G   +S
Sbjct: 32  LGSPLGVVLPDQLAENVERFRSVYRGHHLAGQIFLAHKANRSSALLRRLAATGAGVDVAS 91

Query: 60  LYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           L E+       F               +        T+  ++ ++L++      + H   
Sbjct: 92  LGELQHALGCGFAPSLITATGPKDTRFLWLAARTGATVSLDSPAELDQLATLV-RAHGLP 150

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK--------IESEIKNVNG--LMFHNNCE 168
            +++   +S  +          SR G    +           ++   + G          
Sbjct: 151 RVQVLLRLSGFEGSGVKVLTRRSRFGTAVPELDAVLDTLERYADAVELTGVAYHLDTTSA 210

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD 206
            +  +     L  +E+  G        + +GGG     
Sbjct: 211 AEKAVALEGCLLALEECRGR-GLAPRAVDIGGGFGVNY 247



 Score = 45.9 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 43/129 (33%), Gaps = 24/129 (18%)

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA----------HVPDYL 273
           ++   ++ EPG A++         VL+  +     + V  +  A           +   L
Sbjct: 329 EHLYDLHTEPGRALLDQCGVTLARVLETRDVGSGPLWVRLAATAGDIGLEEHGILIDPVL 388

Query: 274 LYQES------------ATIYPNTGPYTAMVCGRSCLAGDIFGEFH--FEKPVKIGDRIS 319
           L +E             A      GP    + G  CL  D+         +    GD ++
Sbjct: 389 LPREPREPGPTGEPGPPAGPGGPGGPVETYLFGSLCLESDLITRRTVHLPRRPAPGDLLA 448

Query: 320 FEDVAGYNI 328
           F + AGY +
Sbjct: 449 FVNTAGYCM 457


>gi|313677330|ref|YP_004055326.1| orn/dap/arg decarboxylase 2 [Marivirga tractuosa DSM 4126]
 gi|312944028|gb|ADR23218.1| Orn/DAP/Arg decarboxylase 2 [Marivirga tractuosa DSM 4126]
          Length = 462

 Score = 73.6 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 60/400 (15%), Positives = 112/400 (28%), Gaps = 53/400 (13%)

Query: 3   KTPYYLIDKQKLLNNLDT----ALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYMDG 54
            TP  L    K+  N++          K    K         K      + +   +    
Sbjct: 41  GTPLKLTYLPKISQNINQAREYFANAFKKLNYKGEYTYCYCTKSSHFSFVMEEALKAGVH 100

Query: 55  TTSSS---LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVS------QLN 105
             +SS   +  V   HEK       Y V              + I     +       LN
Sbjct: 101 METSSSFDIPIVKKLHEKGLLTKQHYVVCNGFKRPLYRQYINELINDGFENVVPVLDDLN 160

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCK----DKIESEIKNVNGL 161
           +      +      + I  +           +R   R  +          +SE   +  L
Sbjct: 161 EIDSYEAEAKNPYKVGIRIASDEEPTFEFYTSRLGIRYNDVIDLYQNKIAKSEKAKLKML 220

Query: 162 MFHNNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIH----------FTDKD 208
            F  N   K    + + L        E      +++ I +GGG            +    
Sbjct: 221 HFFINTGIKDTAYYWSELGRFIDKYCELKKIAPELDTIDIGGGFPIKTSLGFEYDYQYMV 280

Query: 209 YPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVE 266
             + +  Q + E +   +  I  E G   V  +     ++LD  +  + +   ++D S  
Sbjct: 281 DQIVENIQWICEKNNVETPHIMTEFGSYTVGESGATIYSILDQKLQNDKELWYMIDGSFI 340

Query: 267 AHVPDYLLYQE----SATIYPNTGPYTAMVCGRSCLAGDIFGE-----FHFEKPVKIGD- 316
            H+PD     +     A    N   +   + G +C + D +         F   V+  + 
Sbjct: 341 THLPDVWGLNQKFILMAINNWNEPFHKVKMGGLTCDSMDYYNSEAHSFEVFLPKVERNEQ 400

Query: 317 -RISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDGT 350
             + F     Y  +    + G     I  P   + + D  
Sbjct: 401 QYVGFFHTGAYQESLG-GYGGIQHCLIPAPKHVLVDKDEE 439


>gi|198427499|ref|XP_002125033.1| PREDICTED: similar to Ornithine decarboxylase (ODC) [Ciona
           intestinalis]
          Length = 315

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 82/254 (32%), Gaps = 14/254 (5%)

Query: 96  IIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI 155
           + F+ V +L+K K        K+ LR+N +         D          K     +   
Sbjct: 25  MTFDNVDELHKIKRI--HPTGKLLLRLNVTDFEKGVKFGDKFGASMSEARKLTLLCKELN 82

Query: 156 KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDY--P 210
            N+ G+ FH    + S       L   ++ +         ++ I +GGG    +      
Sbjct: 83  LNLVGICFHPGSGSDSSEATRNCLHRCKELYDFATSNEIHLKIIDIGGGFVCGENFIEIS 142

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD---ISENIKNLVIVDSSVEA 267
            +      K F  +  V +  EPG   V N     T V     + +  K  +        
Sbjct: 143 EQVTATVGKLFPPETGVTVIAEPGRFFVKNAFGFVTPVHGKAIVGDRAKYYIGAGVFSTF 202

Query: 268 HVPDYLLYQESATIYPNTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323
            +  +  ++               Y++ V G +C   D+          +IGD   F+++
Sbjct: 203 CMTLFEKFERIPENLSRKAEKCDLYSSTVYGPTCAGVDVVLNNILLPEAQIGDWWFFDNM 262

Query: 324 AGYNINRKNWFNGI 337
             Y+      FNG 
Sbjct: 263 GAYSSLVSLGFNGY 276


>gi|119628015|gb|EAX07610.1| hCG1787701, isoform CRA_b [Homo sapiens]
          Length = 172

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 49/166 (29%), Gaps = 16/166 (9%)

Query: 188 HFITQIEWISLGGGIHFTDKDYPVKDF------CQRLKEFSEKYSVQIYLEPGEAIVTNT 241
                +  + +GGG    +   P  +           ++  E+  V++  EPG   V + 
Sbjct: 7   RAGHDMSCLDIGGGFPGMEGSGPKFEELARVISAALAQDLPEERGVKVIAEPGCFYVESV 66

Query: 242 TTLNTTVLDISENIKNLVIVDS----SVEAHVPDYLLYQESATI-----YPNTGPYTAMV 292
                 ++     ++                V      +E   +          P     
Sbjct: 67  CMAAVNIIAKRAVLEPGGWARMALGGDATVQVSPGPGGEEGQRVGLCPRSWGAAPLPLHP 126

Query: 293 CGRSCLAGD-IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
               C A D +F E      + +GD + F  +  Y  +  + FNG 
Sbjct: 127 LCPMCDAFDRLFLEDVRLPELDVGDWLVFPSMGAYMSSMSSSFNGF 172


>gi|221054205|ref|XP_002261850.1| s-adenosylmethionine decarboxylase-ornithine decarboxylase
            [Plasmodium knowlesi strain H]
 gi|193808310|emb|CAQ39013.1| s-adenosylmethionine decarboxylase-ornithine decarboxylase, putative
            [Plasmodium knowlesi strain H]
          Length = 1393

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 62/229 (27%), Gaps = 8/229 (3%)

Query: 2    IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            I T    I+ +K+L              V    ++K      +   L         +S+ 
Sbjct: 848  IDTSVVCINLEKILVQYIRFKKNL--PSVTPFYSVKSNNDDIVLKFLYGLNCNFDCASVG 905

Query: 62   EVML---GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            EV            E   +    K         N +  +    +     K +       +
Sbjct: 906  EVKKLTTLLPDIARERIIFANTIKSINSLIYAKNENINLCTFDNIEELKKIRKYHPKCSL 965

Query: 119  GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
             LRIN      K  ++          E      +    N+ G+ FH     K+   +   
Sbjct: 966  LLRINVDFKNYKSYMSSKYGANEHEWENILAFGKEHNLNIIGVSFHVGSNTKNLFDYCQA 1025

Query: 179  LKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
            +K     F          E ++LGGG     +    K   ++      +
Sbjct: 1026 IKLSRDVFNISKKMGYNFEILNLGGGYPEELEYDSAKKNEEKKYCTLNE 1074



 Score = 60.9 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 20/51 (39%)

Query: 288  YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
            Y A + G+SC   D+     +     I D I +E    Y     + FNG  
Sbjct: 1326 YLANIFGQSCDGLDMITSITYLPECYINDWIIYEYAGAYTFVSSSNFNGFR 1376


>gi|83955986|ref|ZP_00964497.1| probable diaminopimelate decarboxylase [Sulfitobacter sp. NAS-14.1]
 gi|83839750|gb|EAP78928.1| probable diaminopimelate decarboxylase [Sulfitobacter sp. NAS-14.1]
          Length = 475

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 60/435 (13%), Positives = 109/435 (25%), Gaps = 84/435 (19%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           P  +        N+        + G     + A K                G  ++S  E
Sbjct: 45  PLNIQSVDPFRRNIAQLTDCVTDYGLPFLPMFARKANKCLSYVQAARDMGIGIDTASHAE 104

Query: 63  VMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI-- 118
           V    E    G+      A      +   +    T+I +   +L   +D A+   K I  
Sbjct: 105 VDQCLEQGLPGDRIVCTAAVKDRALMILCVGGGVTVILDNEDELELLEDVAEGATKPISV 164

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
           GLR+N        + +    P +++         SE   ++GL FH N  +      + +
Sbjct: 165 GLRLNGFERDGTKLYSRFGFPLTQIPTLAARIGASETLRLDGLHFHLNGYSAEDRIAAIL 224

Query: 179 LKNI-EKEFGHFITQIEWISLGGGIHFTD---KDYPVKDFCQRLKEFSEKYSVQIYLE-- 232
                  +     T   ++ +GGGI                +  +  S            
Sbjct: 225 QTLPLIHKINGDSTAPFFLDIGGGIPMNYLGDAVEWETWLAELDRALSGDRDPITQHNDG 284

Query: 233 PGEAIVTNTTTLNTTVLDISENIKN------LVIVDSSVEAHVPDYL------------- 273
            G          +  V                +    +V AH+ D               
Sbjct: 285 LGRKAGGEGKVDSYPVAQSLVQEDWMRRILDHMADGQTVAAHLRDAHISLRCEPGRSLLD 344

Query: 274 ------------------------------------LYQESATIYPNTGPYTAMVCGRS- 296
                                                +     + P  GP    + G   
Sbjct: 345 GCGITLARVAFCKRDSAGTPVIGVQMNRTQSRSGFAEFALDPLMVPAPGPRKEPIEGYLS 404

Query: 297 ---CLAGDIF--GEFHFEKPVKIGDRISFEDVAGYNI----NRKNWFNGINMPTIAVKNV 347
              C   +     +  F + VK GD + F + AGY +    +R + F    +        
Sbjct: 405 GTYCTESEWLTRRKMSFPQGVKAGDLMVFPNTAGYLMHFLESRSHQF---PLARNVFVTE 461

Query: 348 DGTIKAIREFSYNDY 362
                 +     +D 
Sbjct: 462 GNAGAVV----LDDI 472


>gi|255539080|ref|XP_002510605.1| arginine/diaminopimelate/ornithine decarboxylase, putative [Ricinus
           communis]
 gi|223551306|gb|EEF52792.1| arginine/diaminopimelate/ornithine decarboxylase, putative [Ricinus
           communis]
          Length = 97

 Score = 73.6 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 23/50 (46%)

Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
           +++ V G +C A D   + H    + I D + F ++  Y     + FNG 
Sbjct: 33  HSSTVFGPTCDALDTVLKGHPLPELHINDWLVFPNMGAYTAAAGSNFNGF 82


>gi|19749310|gb|AAG45731.2|AF229441_2 Y4yA [Sinorhizobium fredii]
          Length = 450

 Score = 73.3 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 50/374 (13%), Positives = 99/374 (26%), Gaps = 62/374 (16%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P  L+    L  NL     +     V+  +    K   + G+         G   SSL
Sbjct: 35  GSPLNLVWPDALRENLAALKGVLTERRVQHAIYYGAKGNKSPGLMQAALSASAGLDVSSL 94

Query: 61  YEVMLGHE-KFGGETHA-YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           YE+         G        A  +    A+++    I  ++  +L            + 
Sbjct: 95  YELRDARRLGADGARLVATGPAKTNAFHQALINCNALISVDSPEELEDLIHGLPADAGQQ 154

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS-A 177
            + +           +    P   +               +GL FH +   +     + +
Sbjct: 155 PILLRLR--PRDQSKSRFGMPPDAIVHCLVRLAGEGRLRFDGLHFHLSGYRRETRVAALS 212

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTD---KDYPVKDFCQR----------------- 217
              ++  E          I +GGG+         Y      Q                  
Sbjct: 213 EAADLIAEARRMGFFPGMIDIGGGLPIQYVDRARYDAHLAAQAPEDYRTGKIPDSFYPYG 272

Query: 218 ----------------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI 255
                                 +  +  +  + + +EPG A+          +  +    
Sbjct: 273 STLSAADWLHRLLEAEMNQGRSVAGYLAREGLTLAMEPGRALADQAAITVFRISRVKAVG 332

Query: 256 KNLVIVDSSVEA---------HVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEF 306
            +  ++  S  A          +   L+    AT+   + P  A + G SCL  D+    
Sbjct: 333 PDSHVIFVSFSACETWFASEFLIDPILVPATKATV--QSPPVRAYLAGHSCLDEDVISNR 390

Query: 307 H--FEKPVKIGDRI 318
              F    + GD +
Sbjct: 391 WLTFPTAPRAGDLL 404


>gi|222628307|gb|EEE60439.1| hypothetical protein OsJ_13656 [Oryza sativa Japonica Group]
          Length = 187

 Score = 73.3 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 29/83 (34%), Gaps = 2/83 (2%)

Query: 262 DSSVEAHVPDYLLYQESATIYPNTGPYTA--MVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319
             S+   + D  + +         G  T    V G +C + D     +    + + D + 
Sbjct: 97  YGSLNCILLDSYVPRPRPLAGARPGEETHASTVFGPTCDSIDTVVTGYQLPEMSVDDWLV 156

Query: 320 FEDVAGYNINRKNWFNGINMPTI 342
           F+D+  Y     + FNG     I
Sbjct: 157 FDDMGAYTTAAGSSFNGFATSAI 179


>gi|226942857|ref|YP_002797930.1| arginine decarboxylase [Azotobacter vinelandii DJ]
 gi|226717784|gb|ACO76955.1| arginine decarboxylase [Azotobacter vinelandii DJ]
          Length = 636

 Score = 73.3 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 37/299 (12%), Positives = 83/299 (27%), Gaps = 46/299 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTL---NQYMD 53
           P  +     L + +                 +G   L  +K      + +++        
Sbjct: 69  PLLVRFPDILQDRVRQLTSAFDANIARLGYQSGYTALYPIKVNQQEAVVESIIATANVSI 128

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNKF 107
           G  + S  E++                YKD E          L +   I+    S++   
Sbjct: 129 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALIGQKLGHSVFIVVEKESEVQLI 188

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIKNV 158
            ++A +L     L +   +S               + G      +            + V
Sbjct: 189 IEEAAELRVVPQLGLRVRLSSLTSSKWADTGGEKAKFGLSAAQLLRVAERLRDAGLEQGV 248

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207
             L FH   +  +   +    K   + +         ++ + +GGG+             
Sbjct: 249 RLLHFHMGSQIANLADYQGGFKEAIRYYAELRALGLPLDHVDVGGGLGVDYDGTHSRNPS 308

Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKN 257
             +Y + D+   +    +++          I+ E G A+  +   L   V D+  +   
Sbjct: 309 SINYDMDDYAATVVGMLQEFCDAQGLPHPHIFSESGRALSAHHAMLVVQVTDVERHNDQ 367


>gi|88601108|gb|ABD46552.1| aspartokinase-like protein [Acanthamoeba castellanii]
          Length = 180

 Score = 72.9 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 60/181 (33%), Gaps = 17/181 (9%)

Query: 167 CENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD-----YPVKDFCQRLKEF 221
               S   +      +      +      + LGGG+   +         +++  + +KEF
Sbjct: 1   SGILSSTTWRENADYLAACARQYFPSATSLDLGGGLGIVEVPGEQTALNMQEVDKLVKEF 60

Query: 222 SEKYS-VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI-VDSSVEAHVPDYLLYQESA 279
            +K     ++LEPG   +     L  TV  +        I VD+   + +    LY    
Sbjct: 61  KQKNPEFSLWLEPGRFPIAEAGVLLCTVTQLKSKGSYNYIGVDTGFNSLIRPI-LYAAHH 119

Query: 280 TIYPNTGPY--------TAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINR 330
            I   +  +        TA + G  C +GD+FG         + GD +       Y  + 
Sbjct: 120 QIVNLSRLHSTPGGPSITAEIVGNICESGDVFGHARTMPADTQEGDIVLIATAGAYGHSM 179

Query: 331 K 331
            
Sbjct: 180 A 180


>gi|291388378|ref|XP_002710636.1| PREDICTED: ornithine decarboxylase antizyme inhibitor, partial
           [Oryctolagus cuniculus]
          Length = 300

 Score = 72.9 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 76/246 (30%), Gaps = 25/246 (10%)

Query: 127 SYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF 186
                +    +    R   +C  +++ +I  V   +     E++ ++   +  + +    
Sbjct: 15  GEEGNMKFGTSLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARCVFDMA 74

Query: 187 GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIVTNTTT 243
           G F   +  + +GGG      +   V      L    F E   ++I  EPG   V++  T
Sbjct: 75  GEFGYTMNMLDIGGGFTGTEFQLEEVNHVISPLLDVYFPEGSGIKIISEPGSYYVSSAFT 134

Query: 244 LNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE----------------------SATI 281
           L   ++         +              +Y                            
Sbjct: 135 LAVNIIAKKVVENGKLSSGVEKTGSDEPAFVYYMNDGVYGSFASKLSENLNAIPEVHKKC 194

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
             +   +T+ + G SC   D+  E      + +GD + F+++   + +  + FN    P 
Sbjct: 195 KEDEPLFTSSLWGPSCDELDLIVENCLLPELNVGDWLIFDNMGADSFHEPSAFNDFQRPA 254

Query: 342 IAVKNV 347
           +     
Sbjct: 255 VYYMMS 260


>gi|54024534|ref|YP_118776.1| putative decarboxylase [Nocardia farcinica IFM 10152]
 gi|54016042|dbj|BAD57412.1| putative decarboxylase [Nocardia farcinica IFM 10152]
          Length = 469

 Score = 72.5 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 59/206 (28%), Gaps = 5/206 (2%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            TP +++  Q L  N+     +   + V+  +  A K   +  +     +   G   +S 
Sbjct: 33  GTPAHVVFPQVLAENVGALAAVLDRSPVRSRMCYAHKVNRSPALARAAERCGIGIDVASP 92

Query: 61  YEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E+       FG              +   +++  TI  + + +L    D A+       
Sbjct: 93  GELANARAAGFGPARIEVTGPKGARFLATAVASGATINVDNLWELAALDDLARGTDPIPT 152

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNG-LMFHNNCENKSFLCFSAM 178
           L     +  +         P      +      + I+ +       +             
Sbjct: 153 LLRVGDLPGTPRSRFGVPLPRVDDALRLLAASAARIRFLGFAFHLDSGAVTDRVRAVQTC 212

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHF 204
           L  IE+           + +GGG+  
Sbjct: 213 LALIERAHA-HGLAPHVLDIGGGLRQ 237



 Score = 44.4 bits (103), Expect = 0.027,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 2/44 (4%)

Query: 290 AMVCGRSCLAGDIFG-EFHFEKPV-KIGDRISFEDVAGYNINRK 331
               GR CL  D+      F   +   GD + F + A Y+++  
Sbjct: 394 VYFAGRLCLERDLITTRQVFLPGLPAPGDVVVFPNTAAYHMDLS 437


>gi|319785767|ref|YP_004145242.1| arginine decarboxylase [Pseudoxanthomonas suwonensis 11-1]
 gi|317464279|gb|ADV26011.1| arginine decarboxylase [Pseudoxanthomonas suwonensis 11-1]
          Length = 629

 Score = 72.5 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 47/364 (12%), Positives = 104/364 (28%), Gaps = 54/364 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53
           P  L     L + L         A        G   +  +K     G+  TL  +     
Sbjct: 59  PLLLRFPDILGDRLAQLQSAFALAMDDVGYAGGYTAVYPIKVNQHRGVAGTLAGHHGEGF 118

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------F 107
           G  + S  E+M                YKD E   +      +   T   + K       
Sbjct: 119 GLEAGSKPELMAVLALSRPGGLVVCNGYKDREYIRLALIGRKLGLETFIVIEKPSELRLV 178

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158
            ++A+ L  + GL +   ++         +     + G   +  ++             +
Sbjct: 179 MEEARALGVQPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQLLDLWKNLRDSGMTDCL 238

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207
             L FH   +  +    +  ++   + F        +I ++ +GGG+    +        
Sbjct: 239 QLLHFHMGSQISNVRDIANGMREAVRYFSELSRLGAKIRYMDVGGGLGIDYEGTRSRSEC 298

Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
             +Y +  +   + +   +          +I  E G A+  +   L    +++ +  +  
Sbjct: 299 SINYGLHQYAANIVQPLAEACAEQGLPAPRIVTECGRAMTAHHAVLVADTIEVEQAPEGR 358

Query: 259 VIVDSSVE----AHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313
           V      E     H+ +     +    +            G   LA    G+    +  +
Sbjct: 359 VPDAHDDEPAAIRHLRELHAELERRPPLELFHEAQHFHAEG---LAAYALGQIDLPQRAR 415

Query: 314 IGDR 317
           + D 
Sbjct: 416 VDDL 419


>gi|225445350|ref|XP_002281602.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 240

 Score = 72.5 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 56/170 (32%), Gaps = 20/170 (11%)

Query: 190 ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV--------QIYLEPGEAIVTNT 241
           +  +  + +GGG     +     +    +KE    Y          +I  EPG       
Sbjct: 69  LPPMHVLDIGGGF---QESPTFHEIAAVIKEAINDYFPSSETSEDLKIMAEPGRFFAETA 125

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI---------YPNTGPYTAMV 292
            TL + ++      +              +   Y +S+ +         + N   + + V
Sbjct: 126 FTLVSNIIGKRVRGEKREYWIDDGIYGSFNLPAYDKSSMMVKPLLGGSEWMNKAKFCSTV 185

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
            G  C + D+         + + D + F ++  Y  +    FNG ++ +I
Sbjct: 186 FGPMCDSMDMVLAESQLPELHMNDVLVFYNMGAYTASAGTRFNGFDISSI 235


>gi|207109548|ref|ZP_03243710.1| carboxynorspermidine decarboxylase (nspC) [Helicobacter pylori
           HPKX_438_CA4C1]
          Length = 178

 Score = 72.1 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 58/174 (33%), Positives = 88/174 (50%), Gaps = 19/174 (10%)

Query: 12  QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFG 71
           ++L  N      +R+ +G K+LLALK +A W  F  L Q ++G  +S LYE  L  E+FG
Sbjct: 5   ERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLYEAKLAFEEFG 64

Query: 72  G-----ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL----NKFKDKAQKL------HK 116
           G     E   Y+ A+K+ E+ A+L    +IIFN+  Q     ++  DK ++L        
Sbjct: 65  GRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNKQLESLGLSPI 124

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN----VNGLMFHNN 166
           K+GLRINP  S     + +P    SRLG       +   ++    V+GL FH +
Sbjct: 125 KMGLRINPLYSEVTPAIYNPCSKVSRLGITPSGFEKGVKEHGLEGVSGLHFHTH 178


>gi|289812001|ref|ZP_06542630.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 69

 Score = 72.1 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 1/61 (1%)

Query: 305 EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYY 363
           EF   K   +GD ++F D   Y I  +  +N      + + + +G  + IR   SY D  
Sbjct: 5   EFLLPKETHVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMIDKNGETRLIRREDSYEDMV 64

Query: 364 N 364
            
Sbjct: 65  K 65


>gi|682769|emb|CAA40813.1| mccE [Escherichia coli]
          Length = 521

 Score = 72.1 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/336 (10%), Positives = 84/336 (25%), Gaps = 24/336 (7%)

Query: 44  MFDTLNQYMDGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQ 103
           M   ++         S+ E+ L                K  E+   +     I  + + +
Sbjct: 1   MVQIISGKGLYAEVCSVDEMNLAKRDGFKRIVFDGPLKKTSELLKAIEIGALIEVDNIDE 60

Query: 104 LNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMF 163
             +  +  +       + +  S  Y   +          +        +SE   ++G   
Sbjct: 61  CKRLNELCKLHKLTCRIHLRLSHYYDDNLSRFGLSESEAINLLEMLISKSEYLILDGFHL 120

Query: 164 HNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIH-------FTDKDYPVKDFCQ 216
           H      +       +    +    ++     ++LG GI          +     + F  
Sbjct: 121 HVGSNLPNAEKICKAIIQYHELILRYMPDDGTLNLGSGIPADSFSASSDNPTPCPEVFFS 180

Query: 217 RLKEFSEKYS------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP 270
            + +  +              EPG  +V +       V+         V   +     +P
Sbjct: 181 SIYDTIKNCFGTVCDKWNYIFEPGRHLVEDFGYFIGKVISTKNRYGVKVAQTNIGINWIP 240

Query: 271 DYLLYQE------SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRIS-FEDV 323
               +        +     +      ++ G +C   D            + D +      
Sbjct: 241 SIRNWDHSFTLFHNHNHISDDKSDEYIIAGFNCFECDCLFPSVILPS-NLSDYLFSVRGC 299

Query: 324 AGYNINRKNWFNGINMPTIAVKNVD--GTIKAIREF 357
             Y++   N +   N+  +     D     +  R  
Sbjct: 300 GAYDMQTGNQW-TRNLYAVYTITNDVVNISRIHRRE 334


>gi|330946400|gb|EGH47481.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2
           [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 215

 Score = 72.1 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 67/191 (35%), Gaps = 19/191 (9%)

Query: 160 GLMFHNNCENKSFLCFSAMLKNIEKEFG----HFITQIEWISLGGGIHFTDKDYPV---- 211
           G+ FH   + +    + A +  ++  F          ++ I++GGG              
Sbjct: 23  GISFHVGSQQRDISVWDAAIAKVKVIFERLKEEDGIVLKLINMGGGFPANYITRTNSLET 82

Query: 212 --KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-----IKNLVIVDSS 264
             ++  + LKE       +I LEPG ++++N   L + V+ ++        + +      
Sbjct: 83  YAEEIIRFLKEDFGDDLPEIILEPGRSLISNAGILVSEVVLVARKSRTAVERWVYTDVGK 142

Query: 265 VEAHVPDYLLYQESATIYPNTGP-YTAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISF 320
               +       +        G     ++ G +C + DI  E +       + IGDR+ +
Sbjct: 143 FSGLIETMDEAIKFPIWTEKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRMYW 202

Query: 321 EDVAGYNINRK 331
                Y  +  
Sbjct: 203 LSTGAYTTSYS 213


>gi|333022870|ref|ZP_08450934.1| putative Orn/DAP/Arg decarboxylase 2 [Streptomyces sp. Tu6071]
 gi|332742722|gb|EGJ73163.1| putative Orn/DAP/Arg decarboxylase 2 [Streptomyces sp. Tu6071]
          Length = 531

 Score = 72.1 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 19/150 (12%), Positives = 45/150 (30%), Gaps = 4/150 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           + +P  ++  Q+++ N+      R    ++  +  A K   +  +   L     G   +S
Sbjct: 32  LGSPLNVVLPQQVVENVRRFEAARDRHHLRGTVYFAHKANRSSALVRALATSGAGLDVAS 91

Query: 60  LYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           L E+  G    F  +        +   +        T+      +L +      +     
Sbjct: 92  LEELRHGLGSGFTPDRIGATGPKEPEFLWLAARTGVTVTVEDQGELERLAVLVARYE-LP 150

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCK 148
            +++   +S             SR G    
Sbjct: 151 RVKVQLRLSGFPSQGVRQLSRPSRFGTPFA 180



 Score = 42.8 bits (99), Expect = 0.087,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 39/131 (29%), Gaps = 18/131 (13%)

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA--------------HVPDY 272
             + +EPG A++         V+D+      +  V  ++ A               +   
Sbjct: 331 YDLAVEPGRALMDQCGATLARVVDVRTGPDGIAQVRLAMNADDCALEEHGILVDPLLLPR 390

Query: 273 LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPV-KIGDRISFEDVAGYNINR 330
                     P        + G  CL  D+          +   G+ ++F + AGY ++ 
Sbjct: 391 PGGAPVPDPGPGAATGVY-LHGNLCLESDLITRRLVQLPRLPAPGELLAFANTAGYAMDF 449

Query: 331 KNWFNGINMPT 341
               N    P 
Sbjct: 450 SAQ-NAERRPP 459


>gi|307326215|ref|ZP_07605412.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces violaceusniger Tu 4113]
 gi|306888158|gb|EFN19147.1| Orn/DAP/Arg decarboxylase 2 [Streptomyces violaceusniger Tu 4113]
          Length = 502

 Score = 72.1 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/234 (11%), Positives = 64/234 (27%), Gaps = 20/234 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYM---DGTT 56
           + +P  ++  +++  N +    + +   +  ++  A K   +  +   L        G  
Sbjct: 33  LGSPLNVLLPERIAENTERFRDVYRRHHLAGRVYFAHKANRSSSLARRLAAEDPAAVGVD 92

Query: 57  SSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK-- 113
            +SL E+       F  E            +        T+  ++  +L +  D  +K  
Sbjct: 93  VASLGELRHVLGCGFTPERIMATGPKDPEFLWLAARVGVTVNLDSRGELEQLADLVRKYA 152

Query: 114 -LHKKIGLRINPSVSYSKFI--LADPNRPFSRLGEKCKD------KIESEIKNVNGLMFH 164
                + LR++   S +             SR G    +       +E     V      
Sbjct: 153 LPRVDVLLRLSEFESAAGPEASGVRVLSRRSRFGSPAGEAGELLSAVERHRDAVELTGVA 212

Query: 165 NNCENKSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFC 215
            + +   F      L+                  + +GGG          +   
Sbjct: 213 YHLDTTGFAEKVRALERCVMVMDECRARGLAPRVVDIGGGFGVGYVADAGEWES 266



 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 48/147 (32%), Gaps = 18/147 (12%)

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV-------------- 269
           ++   +  EPG A+V         VLD+    +     +  V   +              
Sbjct: 338 EHLYDLCAEPGRALVDQCGLSLARVLDVRRTGEGAGPGEYLVRLGMNAGDVSLEEHGVLV 397

Query: 270 PDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPV-KIGDRISFEDVAGYN 327
              LL +       +  P    + G  CL  D+      F   + + GD ++F + AGY 
Sbjct: 398 DPVLLPRTGGGGERDEEPVGVYLVGNLCLEADLITRRMVFLPRLPRTGDLLAFANTAGYA 457

Query: 328 INRKNWFNGINMPT--IAVKNVDGTIK 352
           ++              +AV    G+ +
Sbjct: 458 MDFHAHHAQRQPVARTVAVVREGGSWR 484


>gi|333029444|ref|ZP_08457505.1| Biosynthetic arginine decarboxylase [Bacteroides coprosuis DSM
           18011]
 gi|332740041|gb|EGJ70523.1| Biosynthetic arginine decarboxylase [Bacteroides coprosuis DSM
           18011]
          Length = 631

 Score = 72.1 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/316 (11%), Positives = 89/316 (28%), Gaps = 49/316 (15%)

Query: 2   IKTPYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM- 52
           I TP  +     L + ++          +    K    ++  +K      +   +  +  
Sbjct: 56  IATPLLVRFPDILDHRIENTAQCFKQASEEYNYKAQNFIIYPIKVNQMQPVVSEIISHGK 115

Query: 53  ---DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVS 102
               G  + S  E+          E+      YKD            +     ++   ++
Sbjct: 116 KFNLGLEAGSKPELHAVIAINTDSESLIICNGYKDESYIELALLAQKMGKRIFLVVEKMN 175

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK----- 156
           +L       +KL+ +  + I   ++ S     + +    S+ G    + +E+        
Sbjct: 176 ELKLIARLGKKLNVRPNIGIRIKLASSGSGKWEDSGGDASKFGLTSSELLEALDYLESKD 235

Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
               +  + FH   +    +              +       +E++ +GGG+        
Sbjct: 236 MKDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHKLGFAVEFVDVGGGLGVDYDGTR 295

Query: 211 VKDFCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDIS 252
                  +    ++Y                     I  E G A+  + + L   VL+ +
Sbjct: 296 SASTGSSVNYTLQEYVNDSISSMVDASDKNGLPHPNIITESGRALTAHHSVLIFEVLETT 355

Query: 253 ENIKNLVIVDSSVEAH 268
              +    +  S   H
Sbjct: 356 SLPEWDDEMVVSENDH 371


>gi|308485210|ref|XP_003104804.1| hypothetical protein CRE_23889 [Caenorhabditis remanei]
 gi|308257502|gb|EFP01455.1| hypothetical protein CRE_23889 [Caenorhabditis remanei]
          Length = 485

 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/375 (10%), Positives = 106/375 (28%), Gaps = 42/375 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSLYEV 63
           P++++D   +   L+    +     ++   A+ C A   +   L+  +D     S+  E+
Sbjct: 62  PFFVMDVAAIERRLEALRVMLPR--IRPNYAVACNADPVLARVLSNNIDVNFEVSNSAEL 119

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
            L +         +       +          + F   ++             +I + I 
Sbjct: 120 ELTNLYSEPTRSIFCSQLMTRKAIKTAVLSGCMTFVVENEKQMTDVMNASPEAEIVIGIC 179

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
            S S  +              E+  +       N++G+               A+     
Sbjct: 180 LSYSSGEVP----FGCSVDELEEILEMGHLLGANISGIYLELGVRASLHDYIHALHDASS 235

Query: 184 K--EFGHFITQIEWISLG---------GGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232
                      + +++ G         G ++  D         + + E  +  S++    
Sbjct: 236 MIVTANEKFLSLRYVTFGNLAIPTAEDGSVNNNDFISFCNAMNETICELFDD-SIEFSAN 294

Query: 233 PGEAIVTNTTTLNTTVLD--------------------ISENIKNLVIVDSSVEAHVPDY 272
            G  +VTN   L T V+                     + +    +       +  +   
Sbjct: 295 IGRFLVTNAFALCTNVIGKRALDAKFITNDDFDDGVGFVYQTNDGVYGSFGCKQMDINPL 354

Query: 273 LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN 332
               +      +   +   + G +    D+       + +++G+ + +E +  + I   +
Sbjct: 355 CKPLDVQKESVDEQLHFGTILGPTLDCTDVAQRITKCRQLRVGEWLVWEQMGAFTIPADS 414

Query: 333 WFNGINMPTIAVKNV 347
                ++P +   + 
Sbjct: 415 E---HSVPPVYYYSG 426


>gi|294675257|ref|YP_003575873.1| arginine 2-monooxygenase [Prevotella ruminicola 23]
 gi|294473439|gb|ADE82828.1| arginine 2-monooxygenase [Prevotella ruminicola 23]
          Length = 630

 Score = 71.7 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/260 (10%), Positives = 76/260 (29%), Gaps = 28/260 (10%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
           ++D  ++           +    K    ++  +K      + + +  +      G  + S
Sbjct: 67  ILD-NRIEKTWSCFKKASEEYDYKGENYVVYPIKVNQMQPVVEEIISHGRKFNLGLEAGS 125

Query: 60  LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112
             E+          ++      YKD            +     I+   +++L     +A+
Sbjct: 126 KPELHAVIAMQCQSDSIIICNGYKDQSYIELALLAQKMGKQIFIVVEKMNELEIIAREAK 185

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIES--------EIKNVNGLMF 163
           K++ +  + I   ++ S     + +    S+ G    + +E+            +  + F
Sbjct: 186 KMNIRPNIGIRIKLASSGSGKWEESGGDASKFGLTSAELLEALDFLEKKGLNDCLRLIHF 245

Query: 164 HNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
           H   +          L+       +       ++++  GGG+               +  
Sbjct: 246 HIGSQITKIRRIQTALREASQFYIQLHKMGYNVDFVDCGGGLGVDYDGTRSPSSESSVNY 305

Query: 221 FSEKYSVQIYLEPGEAIVTN 240
             ++Y         EA   N
Sbjct: 306 SIQEYVNDCIYTFVEAANKN 325


>gi|327538875|gb|EGF25516.1| diaminopimelate decarboxylase [Rhodopirellula baltica WH47]
          Length = 447

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 45/406 (11%), Positives = 90/406 (22%), Gaps = 85/406 (20%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE--- 62
           ++    + +N+     +   A V  ++  A K         T      G   +S  E   
Sbjct: 24  VLSTDPMRSNIKDLQNVASQASVPLQIHFARKANKCAEFVRTGLMESIGFDVASESETQQ 83

Query: 63  -----VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQ----LNKFKDKAQK 113
                +      F               I + + +   ++ +   +              
Sbjct: 84  TLDELLRFPQHPFDSPIVCTAAVKPVSLIRSCVLSNIVLVIDNEDELTTLRETLAHLGST 143

Query: 114 LHKKIGLRINPSVSYSKFILADPNR-PFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF 172
             K          S     L      P   L    +   +     V G+ FH +  ++ F
Sbjct: 144 APKARIAFRLQHCSAKFPDLPSRFGMPADELTLLARSLCDEPRIQVVGIHFHVHRSDEQF 203

Query: 173 LCF-----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF------------- 214
                         +          + W+ +GGG       +  +               
Sbjct: 204 SPSFTKALIEDALRVVDRVREIGHAVAWLDMGGGFPVNYLCHQKQWQRFFKEAHTFTESS 263

Query: 215 ------------------------------------CQRLKEFSEKYSVQIYLEPGEAIV 238
                                                  L     +  + +  EPG A++
Sbjct: 264 GRFEANRKLTWNQRPLRDIDSTWQPMNAADWFRAVLTSSLAYEINRRELILKCEPGRALL 323

Query: 239 TNTTTLNTTVLDISENIKNLV----IVDSSVEAHVPDYLLYQESATIYPNTGPYTA---- 290
                    VL +  +         +++SS      D  L         N          
Sbjct: 324 DGCGLTIAEVLFVKRDQNQNHLIGLMMNSSQCRTTRDDFLVDPIVISVSNESAKPTNQTD 383

Query: 291 ------MVCGRSCLAGDIFG--EFHFEKPVKIGDRISFEDVAGYNI 328
                    G  C   +      F F + +  GD +   + A Y +
Sbjct: 384 HAEIEGYFVGGYCTESEYLMQRRFRFPRGISRGDFVLIPNTAAYQM 429


>gi|196016996|ref|XP_002118346.1| hypothetical protein TRIADDRAFT_62376 [Trichoplax adhaerens]
 gi|190579062|gb|EDV19168.1| hypothetical protein TRIADDRAFT_62376 [Trichoplax adhaerens]
          Length = 143

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 25/63 (39%)

Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGIN 338
                  G   A++ G++C + D+         +  GD I FE+V  Y++     FN   
Sbjct: 54  PVKKNTNGTTNAVLFGQTCDSLDLLLNECSLPKLNAGDWIYFEEVGAYSLVLATEFNSFK 113

Query: 339 MPT 341
            P 
Sbjct: 114 KPK 116


>gi|296141953|ref|YP_003649195.1| Orn/DAP/Arg decarboxylase 2 [Tsukamurella paurometabola DSM 20162]
 gi|296030087|gb|ADG80856.1| Orn/DAP/Arg decarboxylase 2 [Tsukamurella paurometabola DSM 20162]
          Length = 459

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 49/388 (12%), Positives = 109/388 (28%), Gaps = 69/388 (17%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA--GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P  +I+   L  +    +   + A   +++  A K   A  + +       G   +S 
Sbjct: 48  GSPVNVINPAPLAGHAGELIAAAQEARVDLRVYFARKANKALALVEAALAAGHGIDVASE 107

Query: 61  YEVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E+   L                 +  +   +++   I  +   +L        +   + 
Sbjct: 108 QELRQVLAFNPQPDRIILTAAVKPNALLKLAVNSGVVISIDNGDELAALVRVIAECKHRE 167

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK-----NVNGLMFHNNCENKSFL 173
            + +   ++        P    SR G   +   E          ++G  FH +  +    
Sbjct: 168 DVPVALRIAA-----ELPGAAPSRFGMAQEQIREILNNFPGQLALSGFHFHLHGYSAEHR 222

Query: 174 CFSAMLKN-IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC----------------- 215
             +      +     H   +  +I +GGGI     D P                      
Sbjct: 223 SEALAQALDLIATARHQQHRPTFIDIGGGIPMRYLDTPATWDAYQQSTKSSDLSAFWAAK 282

Query: 216 --QRLKEFSEKYSVQIYL----------------------EPGEAIVTNTTTLNTTVLDI 251
             + +    ++     +L                      EPG  ++         V   
Sbjct: 283 APENVYPMWQELVRGAWLASVLSAPGLAQRIADAGIRLHAEPGRCLLDGCGLTVARVEFR 342

Query: 252 SENIKNLVIVDSSVE---------AHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDI 302
            +      ++  ++            + D +L          T P +  + G  C+  ++
Sbjct: 343 KQRSDGTWLIGLAMNRTQLRSAADDFILDPILIPAPE--RAPTPPISGFLVGAYCIEAEL 400

Query: 303 FGEFH--FEKPVKIGDRISFEDVAGYNI 328
                  F + V +GD I+F + AGY +
Sbjct: 401 ITRRRITFPEGVAVGDLIAFTNTAGYLM 428


>gi|197122389|ref|YP_002134340.1| arginine decarboxylase [Anaeromyxobacter sp. K]
 gi|220917171|ref|YP_002492475.1| arginine decarboxylase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|196172238|gb|ACG73211.1| arginine decarboxylase [Anaeromyxobacter sp. K]
 gi|219955025|gb|ACL65409.1| arginine decarboxylase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 654

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/266 (11%), Positives = 72/266 (27%), Gaps = 31/266 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKL--------LLALKCFAAWGMFDTLNQYMD--- 53
           P  +  +  L   +         A  ++        +  +K      + D +        
Sbjct: 75  PCVVRFQDVLRARVKQINEAFGKAVAEMGYGASYFGVYPIKVNQMREVVDEIVDAGAPYH 134

Query: 54  -GTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA 111
            G  + S  E+++        +       YKD E   +      +    +  + K  +  
Sbjct: 135 YGLEAGSKGELLVVLGMNADPDALTICNGYKDEEYLRLALLGRKLGRKVIVVIEKLSELP 194

Query: 112 QKLHKKIGLRINPSVS-------YSKFILADPNRPFSRLGEKCKDKIES--------EIK 156
           Q L     + ++P +                 +  F++ G    + I++        +  
Sbjct: 195 QLLRLGEEMGVDPMIGLRSKLTTRGTGKWEGSSGDFAKFGLTVPELIQAVRILKEAGKEH 254

Query: 157 NVNGLMFHNNC---ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213
               L FH      E +           +  +       IE+  +GGG+          D
Sbjct: 255 CAKLLHFHVGSQLTEIRVVKDAVNEGARVYAKLRKMGLPIEYFDVGGGLGVDYVGTRTND 314

Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVT 239
           F   +    ++Y   +        + 
Sbjct: 315 FTSSVNYSMDEYVGDVVYNVQRVCMN 340


>gi|331011411|gb|EGH91467.1| ornithine/DAP/arginine decarboxylase family decarboxylase 2
           [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 174

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 58/167 (34%), Gaps = 16/167 (9%)

Query: 188 HFITQIEWISLGGGIHFTDKDYPV------KDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
                ++ I++GGG                ++  + LKE       +I LEPG ++++N 
Sbjct: 1   EDGIVLKLINMGGGFPANYITRTNSLETYAEEIIRFLKEDFGDDLPEIILEPGRSLISNA 60

Query: 242 TTLNTTVLDISEN-----IKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-YTAMVCGR 295
             L + V+ ++        + +          +       +        G     ++ G 
Sbjct: 61  GILVSEVVLVARKSRTAVERWVYTDVGKFSGLIETMDEAIKFPIWTEKKGEMEEVVIAGP 120

Query: 296 SCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGIN 338
           +C + DI  E +       + IGDR+ +     Y  +     FNG  
Sbjct: 121 TCDSADIMYENYKYGLPLNLAIGDRMYWLSTGAYTTSYSAVEFNGFP 167


>gi|159572757|emb|CAP19188.1| arginine decarboxylase [Mus musculus]
          Length = 323

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/288 (14%), Positives = 86/288 (29%), Gaps = 29/288 (10%)

Query: 69  KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY 128
                        K        +     + +  +++   K        K+ L I    S+
Sbjct: 8   GVPASKIICANPCKQVAQIKYAAKHGVRLLSFDNEVELAKVVKSHPSAKMVLCIATQDSH 67

Query: 129 SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF-- 186
           S   L+       +      +  +     V G+ FH          ++  + +    F  
Sbjct: 68  SLNHLSLRFGASLKSCRHLLENAKKSHVEVVGVSFHIGSGCPDPQAYAQSIADARLVFQM 127

Query: 187 -GHFITQIEWISLGGGIHFTD------KDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
                  +  + LGGG    +      ++            F E   V I  E G   VT
Sbjct: 128 GEELGHTMNILDLGGGFPGLEGAKVRFEEMASVINSALDLYFPEGCGVDILAELGRYYVT 187

Query: 240 NTTTL------NTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA--- 290
           +  T+         VLD +   +       S+  ++ + +    ++ ++ NT P  A   
Sbjct: 188 SAFTVAVSIVAKREVLDQASREEQTGAAPKSIVYYLDEGVYGVFNSVLFDNTCPTPALQK 247

Query: 291 -----------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
                       + G +    D   E  +   +++GD + F+++  Y 
Sbjct: 248 KPSADQPLYSSSLWGPAVEGCDCVAEGLWLPQLQVGDWLVFDNMGAYT 295


>gi|268560856|ref|XP_002646307.1| Hypothetical protein CBG12014 [Caenorhabditis briggsae]
 gi|187029851|emb|CAP31061.1| hypothetical protein CBG_12014 [Caenorhabditis briggsae AF16]
          Length = 476

 Score = 71.3 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 45/357 (12%), Positives = 100/357 (28%), Gaps = 41/357 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSLYEV 63
           P++++D   +   L+          ++   ++ C A   +   L+  +D     ++  E+
Sbjct: 56  PFFVMDVAAIERRLEVLRSTLPL--IRPNYSIACNADPVLARVLSNNLDVNFEVATSGEL 113

Query: 64  MLGHEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            L           +       +   +AV + C T +     Q+N   + +     ++ L 
Sbjct: 114 ELTCLHSEPSRIIFCSQLLTRKGIKNAVQAGCGTFVVENEKQMNDVMNAS--ADAQMFLA 171

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +    S  +               +  D       N+ G+              +A+   
Sbjct: 172 VCLPYSSGEVP----FGCSIDELVEILDMAHLLGANLTGIYLELGVRATLDDYITAIHDA 227

Query: 182 IE--KEFGHFITQIEWISLG-------GGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232
                        +  ISLG             +      +   R         +     
Sbjct: 228 RSIIDTASTKFLDLRHISLGNLVIPTGTDGSVNNNSISFCETINRAVSELFDDHIDFSAN 287

Query: 233 PGEAIVTNTTTLNTTVLD---------ISENIKNLVIVDSSVEAHVPD---YLLYQESAT 280
            G  +VTN  TL T V+           +++  + V         +       L   +  
Sbjct: 288 IGRFLVTNAFTLCTNVIGKRALNAKYITNDDFDDGVGYLYQTNDGIYGSFGCKLMDINPQ 347

Query: 281 IYPNTGPYTAM---------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNI 328
             P  G  T           V G      D+       + +++G+ + +E +  + I
Sbjct: 348 CKPLNGEETFDGSNQLYLGAVLGPILDGCDVAQRLTRCRQLRVGEWLVWEKMGAFTI 404


>gi|119485411|ref|ZP_01619739.1| arginine decarboxylase [Lyngbya sp. PCC 8106]
 gi|119457167|gb|EAW38293.1| arginine decarboxylase [Lyngbya sp. PCC 8106]
          Length = 674

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 43/355 (12%), Positives = 106/355 (29%), Gaps = 60/355 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L + ++        A          + +  +KC     + + L ++     
Sbjct: 95  PLLIRFPDILEDRIERLNACFAKAIARYKYPGNYRGVYPVKCNQERHLIEDLVRFGQPFK 154

Query: 53  DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK--D 109
            G  + S  E+++         +      YKD +          +    +  + + +  +
Sbjct: 155 FGLEAGSKPELLIALAMLQTPGSLLICNGYKDRDYIETAMLAQRLGHTPIIVMEQLEEVN 214

Query: 110 KAQKLHKKIGLRINPSVSYS-----KFILADPNRPFSRLGEKCKDKIES--------EIK 156
            A +  + +G++    +                   ++ G    + I+          ++
Sbjct: 215 IAIEASRHLGIQPILGIRAKLSTKGMGRWCGTTGDRAKFGLTIPEMIQVVEALKLAGLLE 274

Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTD------- 206
            +  L FH   +  S       ++   +   E  H    ++++ +GGG+           
Sbjct: 275 CLQLLHFHIGSQISSISVIKDAIREASQIYVELSHLGANMKYLDVGGGLGIDYDGSKTNF 334

Query: 207 ---KDYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
              K+Y ++++   +    ++           +  E G AI ++ + L   VL  SE  K
Sbjct: 335 QASKNYNMQNYANDIVAEVKEACEERKVSVPTLISESGRAIASHQSVLVFDVLGTSEVAK 394

Query: 257 NLVIVDSSVEAHV------------PDYLLYQESATIYPNTGPYTAMVCGRSCLA 299
           N     +  +  +            PD         I       +    G   L+
Sbjct: 395 NAPPSITKEDHLILRNLTETYQAINPDNYQEAYHDAIQFKEEAISLFNFGYLSLS 449


>gi|154322364|ref|XP_001560497.1| hypothetical protein BC1G_01329 [Botryotinia fuckeliana B05.10]
 gi|150850576|gb|EDN25769.1| hypothetical protein BC1G_01329 [Botryotinia fuckeliana B05.10]
          Length = 302

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 40/301 (13%), Positives = 83/301 (27%), Gaps = 38/301 (12%)

Query: 50  QYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNK 106
           Q   G   +S+ E+           +  +    K  E  A   N       F+ + +L+ 
Sbjct: 2   QLGVGFDCASVEEMHTVLSLGADPGSIIFANPCKAPEALAFAYNVGVRRTTFDNLDELDS 61

Query: 107 FKDKAQKLHKKIGLRINPSVS--YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFH 164
                      + +  N + +          P      L  + K                
Sbjct: 62  INKYMPNAQLMLRIFANDNSALVALGDKYGAPLESTQALLVRAKRLGSGA---------- 111

Query: 165 NNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC--QRLKEFS 222
              +           + +          +  + +GGG   T+  +          + E +
Sbjct: 112 --SDPAVIRKAVEHSRVVWDIAESLGFSLRIVDIGGGFQSTESAFEKMAVAVSSAISEAA 169

Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN------------------IKNLVIVDSS 264
                    EPG     +  TL   ++    +                    N +     
Sbjct: 170 FPEQTTFIAEPGRFYARSAFTLVCKIIARRVSTTIESSKTLEMLYQNDGIYGNFMNGLIE 229

Query: 265 VEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGE-FHFEKPVKIGDRISFEDV 323
            E  +P  +  + + T+   TG +T  + G +C + D       F   VKIGD + ++++
Sbjct: 230 KEEFMPTLIRSKLNTTMARKTGNHTYKIWGPTCDSTDCVSRSTTFGCEVKIGDFLVYKNM 289

Query: 324 A 324
            
Sbjct: 290 G 290


>gi|298480535|ref|ZP_06998732.1| arginine 2-monooxygenase [Bacteroides sp. D22]
 gi|298273356|gb|EFI14920.1| arginine 2-monooxygenase [Bacteroides sp. D22]
          Length = 630

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/316 (11%), Positives = 96/316 (30%), Gaps = 49/316 (15%)

Query: 2   IKTPYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM- 52
           + +P  +     L N ++          +  G K    ++  +K      + + +  +  
Sbjct: 56  VASPMLVRFPDILDNRIEKMSSCFKQAAEEYGYKAQNFIIYPIKVNQMRPVVEEIISHGK 115

Query: 53  ---DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVS 102
               G  + S  E+          ++      YKD            +     ++   ++
Sbjct: 116 KFNLGLEAGSKPELHAVIAVNTDSDSLIVCNGYKDESYIELALLAQKMGKRIYLVVEKMN 175

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK----- 156
           +L      A++L+ +  + I   ++ S     + +    S+ G    + +E+        
Sbjct: 176 ELKLIAKMAKQLNVQPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDFLESKG 235

Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
               +  + FH   +    +              +      ++E++ +GGG+        
Sbjct: 236 LKDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHSMGFKVEFVDIGGGLGVDYDGTR 295

Query: 211 VKDFCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDIS 252
             +    +    ++Y                     I  E G A+  + + L   VL+ +
Sbjct: 296 SSNSEGSVNYSIQEYVNDSISTLVDVSDKNGIPHPNIITESGRALTAHHSVLIFEVLETA 355

Query: 253 ENIKNLVIVDSSVEAH 268
              +     + + +AH
Sbjct: 356 TLPEWDDEEEIAPDAH 371


>gi|291575309|gb|ADE10234.1| putative diaminopimelate decarboxylase [Actinoplanes liguriensis]
          Length = 406

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 55/375 (14%), Positives = 112/375 (29%), Gaps = 40/375 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ID+  + +     +      G  +  + K     G    + +   G    S  E
Sbjct: 50  GTPVHVIDETDVHSRCAEYVAAF-GPGA-VCCSAKGGLLRGAARWIARDGLGCYCRSAAE 107

Query: 63  VMLGH-EKFGGETH-AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           +          E+   +       +++A LS    ++  + S+      ++ +  +++ L
Sbjct: 108 LRTALDAGIRPESLALFGSGKSVADLEAALSCGAAVVIGSASEAEVVAARS-RPGQRVLL 166

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           R+ P  +   + +   +               S    + GL          F  + + L+
Sbjct: 167 RVRPGSAQRGYGVRLNSSAALAAVATVTR---SRRLVLAGLDCSLGHRLNRFGTYESCLR 223

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
                     T +  ++LGGG      D PV  F  RL+  ++  S    +EP E  V+ 
Sbjct: 224 EAIGFVARLRTTVPVLNLGGGHA---ADLPVGIFAARLRAVAQVTSEGYGIEPPEVHVSP 280

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGR----- 295
              L          +         ++  VPD L            G +TA + GR     
Sbjct: 281 GRALLGRAGITVHRVVAAGDGVIELDGDVPDCLPGA------DCAGLHTAALIGRASPAP 334

Query: 296 ----SCLAGD-IFGEFHFEKPVKIGDRISFEDVAGYN-----INRKNWFNGINMPTIAVK 345
               +   GD           +  GD ++      Y+                 P +   
Sbjct: 335 GRSITVRCGDATVAVAELPGDMAAGDLVALSGTGAYHQRRDVYV--------GRPAVVAV 386

Query: 346 NVDGTIKAIREFSYN 360
                   +   + +
Sbjct: 387 CGGRARTLLPRETID 401


>gi|290962894|ref|YP_003494076.1| lysine/ornithine decarboxylase [Streptomyces scabiei 87.22]
 gi|260652420|emb|CBG75553.1| putative lysine/ornithine decarboxylase [Streptomyces scabiei
           87.22]
          Length = 489

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 22/224 (9%), Positives = 60/224 (26%), Gaps = 13/224 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           + +P  ++   ++ +N+     +     +  ++  A K   A  +   L        ++S
Sbjct: 34  LGSPLNVLLPDQIADNVRRFRAVLDRHRLAGRICFAHKANRAGSLVRRLTTTEAALDAAS 93

Query: 60  LYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           L E+       F G             +     +   +  +  ++L       +      
Sbjct: 94  LGELRHALGSGFTGSRIMATGPKDPRFLWLAARSGACLNADGPAELEGAASLVRAHGLPR 153

Query: 119 -----GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN----GLMFHNNCEN 169
                 L    +                +      D ++   + +     G        +
Sbjct: 154 VRVLLRLSGFEAPGTRTLSRRSRFGTPVKSLHLLLDVLDRHREELEPIGVGYHLDTTSVD 213

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213
           +  +     L+ +E E      +   I +GGG       +  + 
Sbjct: 214 EKAVALEGCLRAME-ELRVRGFRPRVIDVGGGFGVNYLAHAAQW 256


>gi|119627885|gb|EAX07480.1| arginine decarboxylase, isoform CRA_l [Homo sapiens]
 gi|193784130|dbj|BAG53674.1| unnamed protein product [Homo sapiens]
          Length = 309

 Score = 70.6 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/249 (14%), Positives = 83/249 (33%), Gaps = 37/249 (14%)

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN---VNGLMFHNNCENKSFLCFSA 177
            +    +     L+  +  F    + C+  +E+  K+   V G+ FH          ++ 
Sbjct: 1   MVLCIATDDSHSLSCLSLKFGVSLKSCRHLLENAKKHHVEVVGVSFHIGSGCPDPQAYAQ 60

Query: 178 MLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLK------EFSEKYSVQ 228
            + +    F        ++  + LGGG   T+      +    +        F E   V 
Sbjct: 61  SIADARLVFEMGTELGHKMHVLDLGGGFPGTEGAKVRFEEIASVINSALDLYFPEGCGVD 120

Query: 229 IYLEPGEAIVTNTTTLNTTVLDI-----------------------SENIKNLVIVDSSV 265
           I+ E G   VT+  T+  +++                           +     I +S +
Sbjct: 121 IFAELGRYYVTSAFTVAVSIIAKKEVLLDQPGREEENGSTSKTIVYHLDEGVYGIFNSVL 180

Query: 266 EAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
             ++    + Q+  +       Y++ + G +    D   E  +   + +GD + F+++  
Sbjct: 181 FDNICPTPILQKKPSTEQP--LYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNMGA 238

Query: 326 YNINRKNWF 334
           Y +   + F
Sbjct: 239 YTVGMGSPF 247


>gi|258647760|ref|ZP_05735229.1| arginine 2-monooxygenase [Prevotella tannerae ATCC 51259]
 gi|260852617|gb|EEX72486.1| arginine 2-monooxygenase [Prevotella tannerae ATCC 51259]
          Length = 630

 Score = 70.6 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/264 (9%), Positives = 68/264 (25%), Gaps = 28/264 (10%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTL----NQYMDGTTSSS 59
           ++D  ++           K    +    ++  +K      + + +     +Y  G  + S
Sbjct: 67  ILD-NRIEKTAQCFNNAAKEYNFQAEHFIIYPIKVNQMRPVVEEIISHGKRYNLGLEAGS 125

Query: 60  LYEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
             E+          ++      +KD     +      +       + K  + A       
Sbjct: 126 KPELHAVIATNMDSDSPIICNGHKDQNFIELALLAQKMGKRVFLVIEKLPELAIIARTAE 185

Query: 119 GLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMF 163
            L + P+        S       +     S+ G    + +++            +  + F
Sbjct: 186 KLGVRPNLGIRIKLASSGAGKWEESGGDASKFGLNSSELLKALQLLNEMNMRDCLKLIHF 245

Query: 164 HNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
           H   +       S           +       I+++  GGG+          +    +  
Sbjct: 246 HIGSQITKIRRISTALREAAQFYVQLRSLGFDIQFVDCGGGLGVDYDGTRSSNSASSVNY 305

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTL 244
             ++Y         +A   N    
Sbjct: 306 SIQEYVNDCVYTFVDAANKNNIPH 329


>gi|167764115|ref|ZP_02436242.1| hypothetical protein BACSTE_02498 [Bacteroides stercoris ATCC
           43183]
 gi|167698231|gb|EDS14810.1| hypothetical protein BACSTE_02498 [Bacteroides stercoris ATCC
           43183]
          Length = 630

 Score = 70.6 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/313 (11%), Positives = 92/313 (29%), Gaps = 49/313 (15%)

Query: 5   PYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L N ++          +  G K    ++  +K      + + +  +     
Sbjct: 59  PMLVRFPDILDNRIEKISCCFRQAAEEYGYKAENFIIYPIKVNQMRPVVEEIISHGKKFN 118

Query: 53  DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLN 105
            G  + S  E+          ++      YKD            +     ++   +++L 
Sbjct: 119 LGLEAGSKPELHAVIAINMDSDSLIICNGYKDESYIELALLAQKMGKRIFLVVEKMNELK 178

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESE--------IK 156
                A++L+ K  + I   ++ S     + +    S+ G    + +E+           
Sbjct: 179 LIAKMAKQLNVKPNIGIRIKLASSGSGKWEDSGGDASKFGLSSSELLEALDFMASKGMQD 238

Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213
            +  + FH   +    +              +  +    +E++ +GGG+          +
Sbjct: 239 CLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHNMGFNVEFVDIGGGLGVDYDGTRSSN 298

Query: 214 FCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDISENI 255
               +    ++Y                     I  E G A+  + + L   VL+ +   
Sbjct: 299 SEGSVNYSIQEYVNDSISTLVDASDKNGIPHPNIITESGRALTAHHSVLIFEVLETTNLP 358

Query: 256 KNLVIVDSSVEAH 268
           +     + +   H
Sbjct: 359 EWDDDEEVTENDH 371


>gi|237716693|ref|ZP_04547174.1| arginine decarboxylase [Bacteroides sp. D1]
 gi|262405469|ref|ZP_06082019.1| arginine decarboxylase [Bacteroides sp. 2_1_22]
 gi|294809666|ref|ZP_06768356.1| arginine 2-monooxygenase [Bacteroides xylanisolvens SD CC 1b]
 gi|229442676|gb|EEO48467.1| arginine decarboxylase [Bacteroides sp. D1]
 gi|262356344|gb|EEZ05434.1| arginine decarboxylase [Bacteroides sp. 2_1_22]
 gi|294443151|gb|EFG11928.1| arginine 2-monooxygenase [Bacteroides xylanisolvens SD CC 1b]
 gi|295086234|emb|CBK67757.1| arginine decarboxylase [Bacteroides xylanisolvens XB1A]
          Length = 630

 Score = 70.6 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/316 (11%), Positives = 95/316 (30%), Gaps = 49/316 (15%)

Query: 2   IKTPYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM- 52
           + +P  +     L N ++          +  G K    ++  +K      + + +  +  
Sbjct: 56  VASPMLVRFPDILDNRIEKMSSCFKQAAEEYGYKAQNFIIYPIKVNQMRPVVEEIISHGK 115

Query: 53  ---DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVS 102
               G  + S  E+          ++      YKD            +     ++   ++
Sbjct: 116 KFNLGLEAGSKPELHAVIAVNTDSDSLIVCNGYKDESYIELALLAQKMGKRIYLVVEKMN 175

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK----- 156
           +L      A++L+ +  + I   ++ S     + +    S+ G    + +E+        
Sbjct: 176 ELKLIAKMAKQLNVQPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDFLESKG 235

Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
               +  + FH   +    +              +       +E++ +GGG+        
Sbjct: 236 LKDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHSMGFNVEFVDIGGGLGVDYDGTR 295

Query: 211 VKDFCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDIS 252
             +    +    ++Y                     I  E G A+  + + L   VL+ +
Sbjct: 296 SSNSEGSVNYSIQEYVNDSISTLVDVSDKNGIPHPNIITESGRALTAHHSVLIFEVLETA 355

Query: 253 ENIKNLVIVDSSVEAH 268
              +     + + +AH
Sbjct: 356 TLPEWDDEEEIAPDAH 371


>gi|87300759|ref|ZP_01083601.1| arginine decarboxylase [Synechococcus sp. WH 5701]
 gi|87284630|gb|EAQ76582.1| arginine decarboxylase [Synechococcus sp. WH 5701]
          Length = 653

 Score = 70.6 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/295 (12%), Positives = 82/295 (27%), Gaps = 48/295 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLA--------LKCFAAWGMFDTLNQYM---- 52
           P  +     L + L+      + A  +   A        +KC     + + L +      
Sbjct: 71  PLLIRFDDILEDRLERLHAAFERAIAQYGYAGRYQGVFPVKCNQQRHVVEQLVESGRQWH 130

Query: 53  DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105
            G  + S  E+++        E       YKD            +      +     ++ 
Sbjct: 131 FGLEAGSKAELLIALSLVDDPEALLICNGYKDQRYIETAILARRLGRQPVVVIEQPDEVE 190

Query: 106 KFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKI--------ESEIK 156
           +    +++L     + +     S S           ++ G    D +           + 
Sbjct: 191 RIITASRELGAAPLIGVRAKLASRSTGRWGSSVGERAKFGLSVPDLLATVEALRQADLLG 250

Query: 157 NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK------ 207
            +  L FH   +          L+    I  +       + ++ +GGG+           
Sbjct: 251 ELRLLHFHVGSQINDIAVLKDALQEAGQIYVQLAELGAPMGYLDVGGGLGIDYDGSRTAT 310

Query: 208 ----DYPVKDFCQRLKEFSEKYSVQI-------YLEPGEAIVTNTTTLNTTVLDI 251
               +Y ++++   +     +              E G AI ++ + L   VL  
Sbjct: 311 AASTNYSLQNYANDVVATVRECCEPRSVPLPTLVSESGRAIASHFSVLVFDVLGT 365


>gi|126347857|emb|CAJ89577.1| putative decarboxylase [Streptomyces ambofaciens ATCC 23877]
          Length = 498

 Score = 70.2 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/232 (11%), Positives = 63/232 (27%), Gaps = 20/232 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYM---DGTT 56
           + +P  ++  + +  N +    + +   +  ++  A K   +  +   L        G  
Sbjct: 32  LGSPLNVLLPETIAENAERFRAVYRRHHLTGRVYFAHKANRSSALLRRLAAEDPAHVGVD 91

Query: 57  SSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ--- 112
            +S  E+       F G+            +        T+  +++ +L++  +  +   
Sbjct: 92  VASPAELRHALGCGFTGDRIMATGPKDPEFLWLAARVGATVNLDSLRELDQLAELVRTYG 151

Query: 113 --KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD------KIESEIKNVNGLMFH 164
             +    + L    SV              SR G   ++       +E     V      
Sbjct: 152 LGRADVLVRLSGFESVDGHGGAGTRLLSRRSRFGTPVREVETVLSAVERHADAVTLTGLA 211

Query: 165 NNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213
            + +          L+       E          I +GGG          + 
Sbjct: 212 YHLDTTGLAEKGRALERCVLLMDECRARGLAPRAIDIGGGFGVGYVADAEEW 263



 Score = 45.1 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 39/111 (35%), Gaps = 13/111 (11%)

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN------ 284
           +EPG A+          VLD+    +        +  +  D  L +    + P       
Sbjct: 344 IEPGRALADQCGLSLARVLDVRPTGEGPDQYLVRLGMNAGDVSLEEHGVLVDPVLLPRGG 403

Query: 285 -----TGPYTAMVCGRSCLAGDIFGEF-HFEKPV-KIGDRISFEDVAGYNI 328
                 GP    + G  CL  D+      F   + + GD ++F + AGY +
Sbjct: 404 PEDGGQGPVGVHLVGNLCLEADLITRRLVFLPALPRAGDLLAFVNTAGYAM 454


>gi|33864414|ref|NP_895974.1| arginine decarboxylase [Prochlorococcus marinus str. MIT 9313]
 gi|48474352|sp|Q7TUJ9|SPEA_PROMM RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|33641194|emb|CAE22324.1| Orn/DAP/Arg decarboxylases family 2:Arginine decarboxylase
           [Prochlorococcus marinus str. MIT 9313]
          Length = 648

 Score = 70.2 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 38/319 (11%), Positives = 92/319 (28%), Gaps = 51/319 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLA--------LKCFAAWGMFDTLNQYM---- 52
           P  +     L + L+      + A  K   A        +KC     + + L +      
Sbjct: 69  PLLIRFDDILEDRLERLHSAFEEAISKYGYAGRYQGVFPVKCNQQRHVVEQLVESGRQWH 128

Query: 53  DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105
            G  + S  E+++        E       YKD            +      +     ++ 
Sbjct: 129 FGLEAGSKAELLIALSLVNDPEALLICNGYKDQRYIETAILARRLGRQPVVVIEQPDEVE 188

Query: 106 KFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKI--------ESEIK 156
           +    +Q+L     L +   ++       +      ++ G    D +           + 
Sbjct: 189 RIIRSSQELGAAPFLGVRAKLTTRSTGHWSSSVGEKAKFGLSVPDLLATVEALRQADLLS 248

Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDK------ 207
           ++  L FH   +          L+   +   E       + ++ +GGG+           
Sbjct: 249 DLRLLHFHIGSQINDIAVLKDALQEAAQIYVELTKLGAPMGYLDVGGGLGVDYDGSRSAS 308

Query: 208 ----DYPVKDFCQRLKEFSEKYSVQ-------IYLEPGEAIVTNTTTLNTTVLD---ISE 253
               +Y ++++   +     +           +  E G AI ++ + L   VL    +  
Sbjct: 309 AASTNYSLQNYANDVVATVRECCKPHGITLPILVSESGRAIASHFSILVFDVLGTGTVPG 368

Query: 254 NIKNLVIVDSSVEAHVPDY 272
            I    + +     ++ + 
Sbjct: 369 AIPKQTVEEPLTIHNLRET 387


>gi|53711530|ref|YP_097522.1| arginine decarboxylase [Bacteroides fragilis YCH46]
 gi|60679791|ref|YP_209935.1| arginine decarboxylase [Bacteroides fragilis NCTC 9343]
 gi|253564410|ref|ZP_04841867.1| biosynthetic arginine decarboxylase [Bacteroides sp. 3_2_5]
 gi|265764924|ref|ZP_06093199.1| arginine decarboxylase [Bacteroides sp. 2_1_16]
 gi|81317136|sp|Q5LIQ3|SPEA_BACFN RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|81383885|sp|Q64ZT8|SPEA_BACFR RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|52214395|dbj|BAD46988.1| putative arginine decarboxylase [Bacteroides fragilis YCH46]
 gi|60491225|emb|CAH05973.1| putative arginine decarboxylase [Bacteroides fragilis NCTC 9343]
 gi|251948186|gb|EES88468.1| biosynthetic arginine decarboxylase [Bacteroides sp. 3_2_5]
 gi|263254308|gb|EEZ25742.1| arginine decarboxylase [Bacteroides sp. 2_1_16]
 gi|301161256|emb|CBW20794.1| putative arginine decarboxylase [Bacteroides fragilis 638R]
          Length = 630

 Score = 70.2 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/306 (11%), Positives = 91/306 (29%), Gaps = 46/306 (15%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
           ++D  ++           +  G K    ++  +K      + + +  +      G  + S
Sbjct: 67  ILD-NRIEKTAYCFKQASEEYGYKAQNFIIYPIKVNQMRPVVEEIISHGKKFNLGLEAGS 125

Query: 60  LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112
             E+          ++      YKD            +     ++   +++L      A+
Sbjct: 126 KPELHAVIAVNTDSDSLIICNGYKDESYIELALLAQKMGKRIFLVVEKMNELKLIARMAK 185

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK--------NVNGLMF 163
           +L+ +  + I   ++ S     + +    S+ G    + +E+            +  + F
Sbjct: 186 QLNVQPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDFLESKGMKDCLKLIHF 245

Query: 164 HNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
           H   +    +              +       +E++ +GGG+               +  
Sbjct: 246 HIGSQVTKIRRIKTALREASQFYVQLHAMGFNVEFVDIGGGLGVDYDGTRSSSSESSVNY 305

Query: 221 FSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD 262
             ++Y                     I  E G A+  + + L   VL+ +   +     +
Sbjct: 306 SIQEYVNDSISTLVDASDKNGIPHPNIITESGRALTAHHSVLIFEVLETATLPQWDDEEE 365

Query: 263 SSVEAH 268
            + +AH
Sbjct: 366 IAPDAH 371


>gi|255010138|ref|ZP_05282264.1| arginine decarboxylase [Bacteroides fragilis 3_1_12]
 gi|313147936|ref|ZP_07810129.1| biosynthetic arginine decarboxylase [Bacteroides fragilis 3_1_12]
 gi|313136703|gb|EFR54063.1| biosynthetic arginine decarboxylase [Bacteroides fragilis 3_1_12]
          Length = 630

 Score = 70.2 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/306 (11%), Positives = 92/306 (30%), Gaps = 46/306 (15%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
           ++D  ++           +  G K    ++  +K      + + +  +      G  + S
Sbjct: 67  ILD-NRIEKTAYCFKQASEEYGYKAQNFIIYPIKVNQMRPVVEEIISHGKKFNLGLEAGS 125

Query: 60  LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112
             E+          ++      YKD            +     ++   +++L      A+
Sbjct: 126 KPELHAVIAVNTDSDSLIICNGYKDESYIELALLAQKMGKRIFLVVEKMNELKLIARMAK 185

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK--------NVNGLMF 163
           +L+ +  + I   ++ S     + +    S+ G    + +E+            +  + F
Sbjct: 186 QLNVQPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDFLESKGMKDCLKLIHF 245

Query: 164 HNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
           H   +    +              +      ++E++ +GGG+               +  
Sbjct: 246 HIGSQVTKIRRIKTALREASQFYVQLHAMGFKVEFVDIGGGLGVDYDGTRSSSSESSVNY 305

Query: 221 FSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD 262
             ++Y                     I  E G A+  + + L   VL+ +   +     +
Sbjct: 306 SIQEYVNDSISTLVDASDKNGIPHPNIITESGRALTAHHSVLIFEVLETATLPEWDDEEE 365

Query: 263 SSVEAH 268
            + +AH
Sbjct: 366 IAPDAH 371


>gi|68070711|ref|XP_677267.1| S-adenosylmethionine decarboxylase-ornithine decarboxylase
            [Plasmodium berghei strain ANKA]
 gi|56497314|emb|CAH99787.1| S-adenosylmethionine decarboxylase-ornithine decarboxylase, putative
            [Plasmodium berghei]
          Length = 1142

 Score = 70.2 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 53/314 (16%), Positives = 98/314 (31%), Gaps = 19/314 (6%)

Query: 2    IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            I T    I+ QK+L              V    A+K      +   L         +S+ 
Sbjct: 738  IDTSVICINLQKILLQYIRFKRNLPR--VTPFYAVKSNDDEVVLKFLYGLNCSFDCASIG 795

Query: 62   E---VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-QKLHKK 117
            E   ++        +   Y    K           + I   T   +++ K          
Sbjct: 796  EINKLITLLPNISTDRIIYANTIKSPASLKYAKEKN-INLCTFDNIDELKKICKYHPTCS 854

Query: 118  IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
            + LRIN      K  ++          EK     +    N+ G+ FH     K+   F  
Sbjct: 855  LLLRINIDFKNYKSYMSSKYGANEYEWEKILKFGKENNMNIIGVSFHVGSNTKNIFDFCQ 914

Query: 178  MLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
             +K   + F        + E +++GGG       YP +      K+  EK+   +  E  
Sbjct: 915  AIKLSREVFNISHRLGYKFEILNMGGG-------YPEELEYDFAKKNEEKHYCTLNEEEL 967

Query: 235  EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCG 294
            +  + +      +V+  + N  N   +  ++   + D+        +   + P   MV  
Sbjct: 968  KKYIMSFL-NEKSVIKKNYNFYNFEKIALAINMSI-DHYFKDIKDQLRIISEPGRYMVAS 1025

Query: 295  RSCLAGDIFGEFHF 308
             S LA  + G+   
Sbjct: 1026 SSTLAAKVIGKRCP 1039


>gi|254432871|ref|ZP_05046574.1| arginine decarboxylase [Cyanobium sp. PCC 7001]
 gi|197627324|gb|EDY39883.1| arginine decarboxylase [Cyanobium sp. PCC 7001]
          Length = 655

 Score = 70.2 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 39/343 (11%), Positives = 95/343 (27%), Gaps = 48/343 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L + L+      + A          + +  +KC     + + L +      
Sbjct: 66  PLLIRFDDILEDRLERLHAAFERAIAQYGYTGRYQGVFPVKCNQQRHVVEQLVESGRRWH 125

Query: 53  DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105
            G  + S  E+++        E       YKD            +      +     ++ 
Sbjct: 126 FGLEAGSKAELLIALSLVDDPEALLICNGYKDRRYIETAILARRLGRQPVVVIEQADEVE 185

Query: 106 KFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKIES--------EIK 156
           +    +++L     + +   +S              ++ G    D + +         + 
Sbjct: 186 RIIHASRELGAAPLIGVRAKLSSRSTGRWGSSVGERAKFGLSVPDLLATVEALRQAGLLP 245

Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTD------- 206
            +  L FH   +          L+   + +G        + ++ +GGG+           
Sbjct: 246 ELRLLHFHIGSQINDIAVLKDALQEAGQIYGELTRLGAPMGYLDVGGGLGIDYDGSRTAT 305

Query: 207 ---KDYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
              K+Y ++++   +     +           +  E G AI ++ + L   VL  +    
Sbjct: 306 AASKNYSLQNYANDVVATVRECCEPHGVPLPTLVSESGRAIASHFSVLIFDVLGTAGPPA 365

Query: 257 NLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLA 299
            +  V +     V +      +                  C A
Sbjct: 366 AVPAVQAEEPLMVRNLRDTFATIHATAEATAQATAEGATCCDA 408


>gi|302416511|ref|XP_003006087.1| ornithine decarboxylase [Verticillium albo-atrum VaMs.102]
 gi|261355503|gb|EEY17931.1| ornithine decarboxylase [Verticillium albo-atrum VaMs.102]
          Length = 165

 Score = 70.2 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 25/80 (31%), Gaps = 3/80 (3%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  ++        +      VK   A+KC     + + L     G   +S +E+  
Sbjct: 73  FFVADLGEVYR--QHMRWKLNLPRVKPFYAVKCNPDPRVIELLAALGTGFDCASKWEIDQ 130

Query: 66  GH-EKFGGETHAYNVAYKDC 84
                   E   Y    K  
Sbjct: 131 ILNMGLAPERIIYAQPCKTN 150


>gi|256833745|ref|YP_003162472.1| Orn/DAP/Arg decarboxylase 2 [Jonesia denitrificans DSM 20603]
 gi|256687276|gb|ACV10169.1| Orn/DAP/Arg decarboxylase 2 [Jonesia denitrificans DSM 20603]
          Length = 1072

 Score = 70.2 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 48/416 (11%), Positives = 101/416 (24%), Gaps = 92/416 (22%)

Query: 3    KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
             +P  + +   L  N+        + G++  + +A K      +    +    G   +S 
Sbjct: 620  GSPLNIHNFDPLTRNITELTNTASHHGIRFAVYVARKANKTLNLVTAAHTQGAGIDVAST 679

Query: 61   YEVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL---- 114
             E+         G    ++ A      I   L N  TI  + + + +     A  L    
Sbjct: 680  RELRQTLAAGVPGPRIVFSAAIKTRDAITDALRNNVTISLDNLDEAHLVTTTAHTLGLTA 739

Query: 115  HKKIGLRINPSVSYSK------------------FILADPNRPFSRLGEKCKDKIESEIK 156
            H    L I                            ++     F   G    ++  +   
Sbjct: 740  HIAFRLAITDPHIAPTRFGLPATDWLTWLTTTNHTHISVDGLHFHLNGYSATERATALRH 799

Query: 157  NVN----------------------GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIE 194
             +                            N  +   F            E      ++ 
Sbjct: 800  AITTIDDLRARGCPASFIDMGGGVPMSYLDNGEQWHQFWAAVDRQPASSCEVTWRGDRLG 859

Query: 195  WISLGGGIHFT--DKDYPVKDFCQRLKEF----------------------------SEK 224
             +  G           Y      + L+                                 
Sbjct: 860  LVDAGADRPSPSVYPYYQDVVRGEWLENIVTSPVAAPTVHDGHGSDRPTPDTTIADALAS 919

Query: 225  YSVQIYLEPGEAIVTNTTTLNTTVLDISEN----------IKNLVIVDSSVEAHVPDYLL 274
              +++  EPG +++         V+               +    +  +SV+  V   L+
Sbjct: 920  RDIELRCEPGRSMLDGCGMTLARVMFRKHTSDGVPLVGLAMNRTQVRSTSVDFLVDPVLV 979

Query: 275  YQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHF--EKPVKIGDRISFEDVAGYNI 328
                A       P +    G  C+  ++     F   + V +GD ++F +  GY +
Sbjct: 980  RPTDAG--EPNEPGSGFFVGAYCIEEELLARRRFVFPQGVAVGDIVAFPNTGGYLM 1033


>gi|73974222|ref|XP_858383.1| PREDICTED: similar to ornithine decarboxylase antizyme inhibitor
           isoform 3 [Canis familiaris]
 gi|73974231|ref|XP_858568.1| PREDICTED: similar to ornithine decarboxylase antizyme inhibitor
           isoform 6 [Canis familiaris]
          Length = 280

 Score = 70.2 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/241 (14%), Positives = 75/241 (31%), Gaps = 25/241 (10%)

Query: 132 ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFIT 191
           +         R   +C  +++ +I  V   +     E++ ++   +  + +    G F  
Sbjct: 1   MKFGTTLKNCRHLLECAKELDVQIIGVKFHVSSACKESQVYVHALSDARCVFDMAGEFGF 60

Query: 192 QIEWISLGGGI-HFTDKDYPVKDFCQRL--KEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248
            +  + +GGG      +   V      L    F E   ++I  EPG   V++  TL   +
Sbjct: 61  TMNMLDIGGGFTGTEFQLEEVNHVISPLLDVYFPEGSGIKIISEPGSYYVSSAFTLAVNI 120

Query: 249 LDISENIKNLVIVDSSVEAHVPDYLLYQE----------------------SATIYPNTG 286
           +       +                +Y                              +  
Sbjct: 121 IAKKVVENDKFPSGVEKTGSDEPAFMYYMNDGIYGSFASKLSEDLNTIPEVHKKYKKDEP 180

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
            +T+ + G SC   D   E      + +GD + F+++   +++  + FN    P I    
Sbjct: 181 LFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSLHEPSAFNDFQRPAIYYMM 240

Query: 347 V 347
            
Sbjct: 241 S 241


>gi|146305762|ref|YP_001186227.1| arginine decarboxylase [Pseudomonas mendocina ymp]
 gi|145573963|gb|ABP83495.1| arginine decarboxylase [Pseudomonas mendocina ymp]
          Length = 637

 Score = 70.2 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 37/298 (12%), Positives = 84/298 (28%), Gaps = 46/298 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKL--------LLALKCFAAWGMFD-TLNQYM--D 53
           P  +     L + +         +  +L        L  +K      + +  +       
Sbjct: 70  PLLVRFPDILQDRVRRLTGAFDASIARLDYQSRYTALYPIKVNQQEAVIENIIATQNVSI 129

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106
           G  + S  E++                YKD E   +      +  N    + K       
Sbjct: 130 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVRLV 189

Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158
            ++ A               S +    AD     S+ G      ++           + +
Sbjct: 190 IEEAADLKVAPQIGLRVRLSSLASSKWADTGGEKSKFGLSAAQILQVVERFKAAGLDQGI 249

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207
             L FH   +  +   +    +   + +G        ++ I +GGG+             
Sbjct: 250 RLLHFHMGSQIANIADYRKGFREAIRYYGELRAMGLPVDHIDVGGGLGVDYDGTHSRNAS 309

Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
             +Y ++D+   + +  +++          I+ E G A+  +   L   V D+  +  
Sbjct: 310 SINYDMQDYADAVVDMLKEFCDRQEIPHPHIFSESGRAMTAHHAVLLVQVTDVERHND 367


>gi|160888524|ref|ZP_02069527.1| hypothetical protein BACUNI_00941 [Bacteroides uniformis ATCC 8492]
 gi|270294889|ref|ZP_06201090.1| arginine decarboxylase [Bacteroides sp. D20]
 gi|317477883|ref|ZP_07937068.1| arginine decarboxylase [Bacteroides sp. 4_1_36]
 gi|156861838|gb|EDO55269.1| hypothetical protein BACUNI_00941 [Bacteroides uniformis ATCC 8492]
 gi|270274136|gb|EFA19997.1| arginine decarboxylase [Bacteroides sp. D20]
 gi|316905956|gb|EFV27725.1| arginine decarboxylase [Bacteroides sp. 4_1_36]
          Length = 630

 Score = 69.8 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 42/336 (12%), Positives = 94/336 (27%), Gaps = 49/336 (14%)

Query: 5   PYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L N ++             G K    ++  +K      + + +  +     
Sbjct: 59  PVLVRFPDILDNRIEKVSCCFRQAADEYGYKGENFIIYPIKVNQMRPVVEEMINHGKKFN 118

Query: 53  DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLN 105
            G  + S  E+           +      YKD            +     ++   +++LN
Sbjct: 119 LGLEAGSKPELHAVIGVNTDPGSLVVCNGYKDESFIELALLAQKMGKRIFLVVEKLNELN 178

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK-------- 156
                A++L  K  + I   ++ S     + +    S+ G    + +E+           
Sbjct: 179 LIAKMAKQLKVKPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDFLEKKDMKD 238

Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKD 213
            +  + FH   +          L+   + F         IE++  GGG+           
Sbjct: 239 CLKLIHFHIGSQITKIRRIKNALREASQFFVQLNKMGFNIEFVDTGGGMGVDYDGTRSSS 298

Query: 214 FCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDISENI 255
               +    ++Y                     I  E G ++  + + L   VL+ +   
Sbjct: 299 SESSVNYSIQEYVNDVVSTFVDVADKHGFPHPNIITETGRSLTAHHSVLIFEVLETASLP 358

Query: 256 KNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAM 291
           +     +   +AH     LY     +   +      
Sbjct: 359 EMDDDWEPGEDAHELVKELYDIWDNLSQRSMLEPWH 394


>gi|329954135|ref|ZP_08295230.1| arginine 2-monooxygenase [Bacteroides clarus YIT 12056]
 gi|328528112|gb|EGF55092.1| arginine 2-monooxygenase [Bacteroides clarus YIT 12056]
          Length = 630

 Score = 69.8 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 36/313 (11%), Positives = 92/313 (29%), Gaps = 49/313 (15%)

Query: 5   PYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L N ++          +  G K    ++  +K      + + +  +     
Sbjct: 59  PMLVRFPDILDNRIEKISCCFRQAAEEYGYKAENFIIYPIKVNQMRPVVEEIISHGKKFN 118

Query: 53  DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLN 105
            G  + S  E+          ++      YKD            +     ++   +++L 
Sbjct: 119 LGLEAGSKPELHAVIAINMDSDSLIICNGYKDESYIELALLAQKMGKRIFLVVEKLNELK 178

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESE--------IK 156
                A++L+ K  + I   ++ S     + +    S+ G    + +E+           
Sbjct: 179 LIAKMAKQLNVKPNIGIRIKLASSGSGKWEDSGGDASKFGLSSSELLEALDFMADKGMQD 238

Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213
            +  + FH   +    +              +      ++E++ +GGG+          +
Sbjct: 239 CLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHSMGFKVEFVDIGGGLGVDYDGTRSSN 298

Query: 214 FCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDISENI 255
               +    ++Y                     I  E G A+  + + L   VL+ +   
Sbjct: 299 SEGSVNYSIQEYVNDSISTLVDASDKNGIPHPNIITESGRALTAHHSVLIFEVLETTNLP 358

Query: 256 KNLVIVDSSVEAH 268
           +     + +   H
Sbjct: 359 EWDDEEEVTENDH 371


>gi|30314892|emb|CAD32231.1| MccE protein [Escherichia coli]
          Length = 521

 Score = 69.8 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 34/336 (10%), Positives = 84/336 (25%), Gaps = 24/336 (7%)

Query: 44  MFDTLNQYMDGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQ 103
           M   ++         S+ E+ L                K  E+   +     I  + + +
Sbjct: 1   MVQIISGKGLYAEVCSVDEMNLAKRDGFNRIVFDGPLKKTSELLKAIEIGALIEVDNIDE 60

Query: 104 LNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMF 163
             +  +  +       + +  S  Y   +          +        +SE   ++G   
Sbjct: 61  CKRLNELCKLHKLTCRIHLRLSHYYDDNLSRFGLSESEAINLLEMLISKSEYLILDGFDL 120

Query: 164 HNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIH-------FTDKDYPVKDFCQ 216
           H      +       +    +    ++     ++LG GI          +     + F  
Sbjct: 121 HVGSNLPNAEKICKAVIQYHELILRYMPDDGTLNLGSGIPADSFSASSDNPTPCPEVFFS 180

Query: 217 RLKEFSEKYS------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP 270
            + +  +              EPG  +V +       V+         V   +     +P
Sbjct: 181 SIYDTIKNCFGTVCDKWNYIFEPGRHLVEDFGYFIGKVISTKNRYGVKVAQTNIGINWIP 240

Query: 271 DYLLYQE------SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRIS-FEDV 323
               +        +     +      ++ G +C   D            + D +      
Sbjct: 241 SIRNWDHSFTLFHNHNHISDDKSDEYIIAGFNCFECDCLFPSVILPS-NLSDYLFSVRGC 299

Query: 324 AGYNINRKNWFNGINMPTIAVKNVD--GTIKAIREF 357
             Y++   N +   N+  +     D     +  R  
Sbjct: 300 GAYDMQTGNQW-TRNLYAVYTITNDVVNISRIHRRE 334


>gi|284040362|ref|YP_003390292.1| Orn/DAP/Arg decarboxylase 2 [Spirosoma linguale DSM 74]
 gi|283819655|gb|ADB41493.1| Orn/DAP/Arg decarboxylase 2 [Spirosoma linguale DSM 74]
          Length = 494

 Score = 69.8 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 56/408 (13%), Positives = 112/408 (27%), Gaps = 55/408 (13%)

Query: 3   KTPYYLIDKQKLLNNLDT----ALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYMDG 54
            TP  L    K+  ++D          K    K         K      + D + +    
Sbjct: 41  GTPLKLTYLPKITEHIDHAKLLFKNAMKRYNYKGNYTYCYCTKSSHFRFVLDEVLKNNVH 100

Query: 55  TTSSSLYEVMLGHEKFGGET------HAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK 108
             +SS Y++ +  E +  E          N   +      +    +    N +  L+  K
Sbjct: 101 LETSSAYDIQIIRELYKAEKVSKSTYIICNGYKRPLYTQYISELLNEGFTNCIPVLDNLK 160

Query: 109 DKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNG 160
           +     +      +N  +  +     +     SRLG +  D           +E   +  
Sbjct: 161 EIEAYENSVTAETVNFGIRIATDEEPNFAFYTSRLGIRYSDVNELYRSKIQPNEKFKLKM 220

Query: 161 LMFHNNCENK---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR 217
           L F  N   K    +    +       E       ++ + +GGG+          D+   
Sbjct: 221 LHFFINTGIKDSAYYWSELSRFMYKYCELRKMCPDLDSVDIGGGMPIQTSFQFTYDYQAM 280

Query: 218 LKEFSEKYSVQI----------YLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSV 265
           + +  E                + E G   V  +  +   V+D  +  + +   ++D S 
Sbjct: 281 IDQIVESIQWICNKNNVPVPHIFTEFGSYTVGESGAVIYKVIDQKLQNDKELWYMIDGSF 340

Query: 266 EAHVPDYL-LYQESATIYPNTGPYTAM---VCGRSCLAGDIFGEFHFEKPV--------K 313
              +PD   L Q+   +  N          + G +C + D +        +         
Sbjct: 341 ITQLPDSWGLGQKYIMLSVNNWENPYQKVNLGGLTCDSHDFYNTEAHSADLYLPIFDQDT 400

Query: 314 IGDRISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDGTIKAIRE 356
               I       Y  +    + G     I  P   + + D        
Sbjct: 401 EDQYIGLFHTGAYQESLG-GYGGIQHCLIPAPQHVIVDKDDEGNLRTR 447


>gi|329964488|ref|ZP_08301542.1| arginine 2-monooxygenase [Bacteroides fluxus YIT 12057]
 gi|328524888|gb|EGF51940.1| arginine 2-monooxygenase [Bacteroides fluxus YIT 12057]
          Length = 630

 Score = 69.4 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 39/313 (12%), Positives = 93/313 (29%), Gaps = 49/313 (15%)

Query: 5   PYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L N ++          +  G K    ++  +K      + + +  +     
Sbjct: 59  PMLVRFPDILDNRIEKISCCFKQASEEYGYKAENFIIYPIKVNQMRPVVEEIISHGKKFN 118

Query: 53  DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLN 105
            G  + S  E+          ++      YKD            +     ++   +++L 
Sbjct: 119 LGLEAGSKPELHAVIATNMDSDSLIICNGYKDESYIELALLAQKMGKRIFLVVEKMNELK 178

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK-------- 156
                A++L  K  L I   ++ S     + +    S+ G    + +E+           
Sbjct: 179 LIAKMAKRLGVKPNLGIRIKLASSGSGKWEDSGGDASKFGLSSSELLEALDYLVEKNMQD 238

Query: 157 NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213
            +  + FH   +          L+       +      ++E++ +GGG+          +
Sbjct: 239 CLKLIHFHIGSQITKIRRIKTALREASQFYVQLHAMGFKVEFVDVGGGLGVDYDGTRSSN 298

Query: 214 FCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDISENI 255
               +    ++Y                     I  E G A+  + + L   VL+ +   
Sbjct: 299 SEGSVNYSIQEYVNDSISTLVDASDKNGIPHPNIITESGRALTAHHSVLIFEVLETATLP 358

Query: 256 KNLVIVDSSVEAH 268
           +     + + E H
Sbjct: 359 EWDDEEEVTKEDH 371


>gi|153809143|ref|ZP_01961811.1| hypothetical protein BACCAC_03453 [Bacteroides caccae ATCC 43185]
 gi|149128119|gb|EDM19339.1| hypothetical protein BACCAC_03453 [Bacteroides caccae ATCC 43185]
          Length = 630

 Score = 69.4 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 36/313 (11%), Positives = 93/313 (29%), Gaps = 49/313 (15%)

Query: 5   PYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L N ++          +  G K    ++  +K      + + +  +     
Sbjct: 59  PTLVRFPDILDNRIEKMSSCFKQAAEEYGYKAENFIIYPIKVNQMRPVVEEIISHGKKFN 118

Query: 53  DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLN 105
            G  + S  E+          ++      YKD            +     ++   +++L 
Sbjct: 119 LGLEAGSKPELHAVIAVNTDSDSLIVCNGYKDESYIELALLAQKMGKRIFLVVEKMNELK 178

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK-------- 156
                A++L+ +  + I   ++ S     + +    S+ G    + +E+           
Sbjct: 179 LIAKMAKQLNVQPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDFMESKGLKD 238

Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213
            +  + FH   +    +              +      ++E++ +GGG+          +
Sbjct: 239 CLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHAMGFKVEFVDIGGGLGVDYDGTRSSN 298

Query: 214 FCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDISENI 255
               +    ++Y                     I  E G A+  + + L   VL+ +   
Sbjct: 299 SEGSVNYSIQEYVNDSISTLVDVSDKNGIPHPNIITESGRALTAHHSVLIFEVLETATLP 358

Query: 256 KNLVIVDSSVEAH 268
           +       + +AH
Sbjct: 359 EWDDEEVIAPDAH 371


>gi|299142275|ref|ZP_07035408.1| arginine 2-monooxygenase [Prevotella oris C735]
 gi|298576364|gb|EFI48237.1| arginine 2-monooxygenase [Prevotella oris C735]
          Length = 630

 Score = 69.4 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 29/264 (10%), Positives = 72/264 (27%), Gaps = 28/264 (10%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
           ++D  ++          +     K    ++  +K      + + +  +      G  + S
Sbjct: 67  ILD-NRIEKTFSCFQKAKAEYNFKAENFIIYPIKVNQMQPVVEEIISHGQKFNLGLEAGS 125

Query: 60  LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112
             E+          ++      YKD            +     I+   +++L+     A+
Sbjct: 126 KPELHAVIAVQCKSDSLIICNGYKDESYIELALLAQKMGKRIFIVVEKLNELDIIARAAK 185

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESE--------IKNVNGLMF 163
           KL+ K  L I   ++ S       +    S+ G    + +++            +  + F
Sbjct: 186 KLNVKPNLGIRIKLASSGSGKWAESGGDASKFGLTSAELLQALEKLDAMGMHDCLRLIHF 245

Query: 164 HNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
           H   +                           I+++  GGG+               +  
Sbjct: 246 HIGSQITKIRRIQTALREAAQFYVNLHKMGYNIDFVDCGGGLGVDYDGTRSSSSESSVNY 305

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTL 244
             ++Y         +A   N    
Sbjct: 306 SIQEYVNDCVYTFVDAADKNNIQH 329


>gi|317504275|ref|ZP_07962265.1| arginine 2-monooxygenase [Prevotella salivae DSM 15606]
 gi|315664645|gb|EFV04322.1| arginine 2-monooxygenase [Prevotella salivae DSM 15606]
          Length = 630

 Score = 69.4 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 30/260 (11%), Positives = 73/260 (28%), Gaps = 28/260 (10%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
           ++D  ++          ++    K    ++  +K      + + +  +      G  + S
Sbjct: 67  ILD-NRIEKTFSCFQKAKREYDYKAENFIIYPIKVNQMQPVVEEIISHGQKFNLGLEAGS 125

Query: 60  LYEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQ 112
             E+          ++      YKD     +            I+   +++L+     A+
Sbjct: 126 KPELHAVIAVQCKSDSLIICNGYKDESYIELAMLAQKMGKRIFIVVEKLNELDIIAHAAK 185

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESE--------IKNVNGLMF 163
           KL+ K  L I   ++ S       +    S+ G    + +E+            +  + F
Sbjct: 186 KLNVKPNLGIRIKLASSGSGKWAESGGDASKFGLTSSELLEALDKLDAMGMHDCLRLIHF 245

Query: 164 HNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
           H   +                           I+++  GGG+               +  
Sbjct: 246 HIGSQITKIRRIQTALREAAQFYVNLHKMGFNIDFVDCGGGLGVDYDGTRSSSSESSVNY 305

Query: 221 FSEKYSVQIYLEPGEAIVTN 240
             ++Y         +A   N
Sbjct: 306 SIQEYVNDCVYMFVDAANKN 325


>gi|160947191|ref|ZP_02094358.1| hypothetical protein PEPMIC_01124 [Parvimonas micra ATCC 33270]
 gi|158446325|gb|EDP23320.1| hypothetical protein PEPMIC_01124 [Parvimonas micra ATCC 33270]
          Length = 353

 Score = 69.4 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 64/359 (17%), Positives = 114/359 (31%), Gaps = 45/359 (12%)

Query: 8   LIDKQKLLNNLDTALY-IRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66
             +   L N +      I+    V++L A+K  +   +  T+ +   G   +S  E  L 
Sbjct: 26  CYNLDLLNNIIRGLKEDIKAIKNVEILYAVKSNSDKEILKTIYENNIGFDIASEEEFNLL 85

Query: 67  HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSV 126
                  +      + +  I   L +  +  FN+  QL  F  +      KIG+R+N + 
Sbjct: 86  KFNTSSISIT-GPDFNNLFIKKCLDSNISFDFNSKIQLVNFFREYAHCFNKIGVRLNVN- 143

Query: 127 SYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF 186
                         SR G    D    E   +N +  H   ++                 
Sbjct: 144 -------------GSRFGFVEDDFSFLEKFVINRIHVHYGNKDIQNTKEVLKYLTYCIFN 190

Query: 187 GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS------EKYSVQIYLEPGEAIVTN 240
               + I+ I+LGGGI     +    +F   L+ F           +++ LEPG+ I   
Sbjct: 191 YKVFSNIDSINLGGGIENIYINQSKYEFFDILENFRVNISKKLNRDIRLILEPGDLISGF 250

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
              +N  +++ +++   + I   +        L+Y E           T  + G SC  G
Sbjct: 251 IGFVNPRIIEYNKDFIIINISRLNFSPWKDIRLVYPER------KIGRTFNIFGNSCFEG 304

Query: 301 DIFGEF-HFEKPVKIGDRISFEDVAGYNINRKNWFN------GINMPTIAVKNVDGTIK 352
           D F +   F+        + F             FN          P I         +
Sbjct: 305 DYFCDSKIFDYDKN---LVLFP-------VSSYNFNVERTIHNRKSPNIIYYRCGKFYE 353


>gi|288928661|ref|ZP_06422507.1| arginine 2-monooxygenase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288329645|gb|EFC68230.1| arginine 2-monooxygenase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 630

 Score = 69.4 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 28/260 (10%), Positives = 76/260 (29%), Gaps = 28/260 (10%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
           ++D  ++           +  G K    ++  +K      + + +  +      G  + S
Sbjct: 67  ILD-SRIEKTASCFRQAAEEYGYKGENFVIYPIKVNQMQPVVEEIISHGRKFNLGLEAGS 125

Query: 60  LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112
             E+          ++      YKD            +     ++   +++L      A+
Sbjct: 126 KPELHAVIAVQCQSDSLIICNGYKDQSYIELALLAQKMGKRIFLVIEKLNELELIARAAK 185

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIES--------EIKNVNGLMF 163
           KL+ +  L I   ++ S     + +    S+ G    + +++            +  + F
Sbjct: 186 KLNVRPNLGIRIKLASSGSGKWEESGGDASKFGLTSSELLQALELLDQKGLRDCLKLIHF 245

Query: 164 HNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
           H   +          L+       +       ++++  GGG+               +  
Sbjct: 246 HIGSQITKIRRIQTALREASQFYVQLHKMGYDVDFVDCGGGLGVDYDGTRSPSSESSVNY 305

Query: 221 FSEKYSVQIYLEPGEAIVTN 240
             ++Y         +A   N
Sbjct: 306 SIQEYVNDCIYTFVDAANKN 325


>gi|326794767|ref|YP_004312587.1| arginine decarboxylase [Marinomonas mediterranea MMB-1]
 gi|326545531|gb|ADZ90751.1| arginine decarboxylase [Marinomonas mediterranea MMB-1]
          Length = 630

 Score = 69.4 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 36/294 (12%), Positives = 81/294 (27%), Gaps = 50/294 (17%)

Query: 5   PYYLIDKQKLLNNLDTALYIR--------KNAGVKLLLALKCFAAWGMFDTL------NQ 50
           P  +     L + ++                A   ++  +K      + + +      N 
Sbjct: 58  PCLVRFPDILHSRIERITQSFCDAIDHYQYKADYAIVYPIKVNQQRRVVEEITSCRPDNA 117

Query: 51  YMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCE------IDAVLSNCDTIIFNTVSQ 103
              G  + S  E+M         +       YKD E      +   + +   ++     +
Sbjct: 118 SKVGLEAGSKPELMAVLAMHQSADGIIVCNGYKDKEFIHLALMAEKMGHQVFLVVEKFHE 177

Query: 104 LNKFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEI------- 155
           L    ++A++L     + I     S       +     S+ G      + S         
Sbjct: 178 LEWIIEEAKRLDVSPRIGIRIRLASTCSTHWGNSGGEKSKFGLTTSQLLRSVQLLKNQNM 237

Query: 156 -KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK---- 207
              +  + FH   +          LK   + +         I+W+ +GGG+    +    
Sbjct: 238 VHCLELIHFHLGSQITRIRDIQNSLKECARYYSELHLMGVNIQWVDVGGGLGVDYEGTRS 297

Query: 208 ------DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTV 248
                 +Y + ++   +                 I  E G A+  +   +   V
Sbjct: 298 QSAYSANYSISEYANNVVFAFHNICEQYNLPHPHIISESGRAVTAHHAMIIADV 351


>gi|288800991|ref|ZP_06406447.1| arginine 2-monooxygenase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288331925|gb|EFC70407.1| arginine 2-monooxygenase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 630

 Score = 69.4 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 34/274 (12%), Positives = 77/274 (28%), Gaps = 31/274 (11%)

Query: 2   IKTPYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM- 52
           + TP  L     L N ++         +K    K    ++  +K      + + +  +  
Sbjct: 56  VTTPVLLRFPDILDNRIEQTASCFQQAKKEYDYKAENFIIYPIKVNQMQPVVEEIISHGR 115

Query: 53  ---DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVS 102
               G  + S  E+          ++      YKD            +     I+   ++
Sbjct: 116 KFNLGLEAGSKPELHAVIAVQCQSDSLIICNGYKDQSYIELALLAQKMGKRIFIVIEKLN 175

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIES-------- 153
           +L      A+KL+ K  L I   ++ S     + +    S+ G    + +E+        
Sbjct: 176 ELEIIAKAAKKLNVKPNLGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALRILDEKG 235

Query: 154 EIKNVNGLMFHNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
              ++  + FH   +                           ++++  GGG+        
Sbjct: 236 LHNSLRLIHFHIGSQITKIRRIQTALREAAQFYINLHKMGYNVDFVDCGGGLGVDYDGTR 295

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTL 244
                  +    ++Y         +A   N    
Sbjct: 296 SPSSESSVNYTIQEYVNDCVYTFVDAANKNNIQH 329


>gi|281424869|ref|ZP_06255782.1| arginine 2-monooxygenase [Prevotella oris F0302]
 gi|281400987|gb|EFB31818.1| arginine 2-monooxygenase [Prevotella oris F0302]
          Length = 630

 Score = 69.0 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/256 (10%), Positives = 71/256 (27%), Gaps = 28/256 (10%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
           ++D  ++          +     K    ++  +K      + + +  +      G  + S
Sbjct: 67  ILD-NRIEKTFSCFQKAKAEYNFKAENFIIYPIKVNQMQPVVEEIISHGQKFNLGLEAGS 125

Query: 60  LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112
             E+          ++      YKD            +     I+   +++L+     A+
Sbjct: 126 KPELHAVIAVQCKSDSLIICNGYKDESYIELALLAQKMGKRIFIVVEKLNELDIIARAAK 185

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESE--------IKNVNGLMF 163
           KL+ K  L I   ++ S       +    S+ G    + +++            +  + F
Sbjct: 186 KLNVKPNLGIRIKLASSGSGKWAESGGDASKFGLTSAELLQALEKLDAMGMHDCLRLIHF 245

Query: 164 HNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
           H   +                           I+++  GGG+               +  
Sbjct: 246 HIGSQITKIRRIQTALREAAQFYVNLHKMGYNIDFVDCGGGLGVDYDGTRSSSSESSVNY 305

Query: 221 FSEKYSVQIYLEPGEA 236
             ++Y         +A
Sbjct: 306 SIQEYVNDCVYTFVDA 321


>gi|238059755|ref|ZP_04604464.1| decarboxylase [Micromonospora sp. ATCC 39149]
 gi|237881566|gb|EEP70394.1| decarboxylase [Micromonospora sp. ATCC 39149]
          Length = 502

 Score = 69.0 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/224 (9%), Positives = 61/224 (27%), Gaps = 13/224 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           + +P  ++   ++ +N      +     ++  +  A K   +      L         +S
Sbjct: 32  LGSPLNVVLPNQIADNAAAFQSVYTGHHLRGEVFFAHKANRSAAFVRRLAATPAAIDVAS 91

Query: 60  LYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           L E+       F  +            +        T+  ++ ++L++     ++   + 
Sbjct: 92  LGELQHALGAGFAPDRVMATGPKTAEFLWLAARCGITVNLDSPAELDELVSLVRRHALRP 151

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSF 172
            +R+   +S      +      SR G    +       I      V  +    + +    
Sbjct: 152 -VRVLLRLSSFTSAGSTILSRPSRFGTPVAEVDALLARIAGARDAVELIGVAYHLDTIGL 210

Query: 173 LCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKD 213
              +  L+                  + +GGG          + 
Sbjct: 211 AEKATALEGCLTVLAGCHRHGLHPRIVDIGGGFGVDYLAEGDQW 254



 Score = 51.7 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 46/123 (37%), Gaps = 12/123 (9%)

Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA---------- 267
           L    +++   +++EPG A++     +   VL++        +V   + A          
Sbjct: 323 LATLLQEHLYDLWIEPGRALLDQCGAVLARVLEVRPTAAGPHLVRLDLNARDVSLEEHGV 382

Query: 268 HVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPV-KIGDRISFEDVAG 325
            +   LL    A            + G  CL  D+      +   + ++GD ++F + AG
Sbjct: 383 MMDPILLPATPAAAPSPAEGNPVYLLGNLCLEADLITRRMVYLPTLPRVGDLLAFANTAG 442

Query: 326 YNI 328
           Y +
Sbjct: 443 YFM 445


>gi|300727492|ref|ZP_07060883.1| arginine 2-monooxygenase [Prevotella bryantii B14]
 gi|299775195|gb|EFI71796.1| arginine 2-monooxygenase [Prevotella bryantii B14]
          Length = 630

 Score = 69.0 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/264 (11%), Positives = 75/264 (28%), Gaps = 28/264 (10%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
           ++D  ++          +K    K    ++  +K      + + +  +      G  + S
Sbjct: 67  ILD-NRIEKTASCFAKAKKEYDFKAENFIIYPIKVNQMQPVVEEIISHGRKFNLGLEAGS 125

Query: 60  LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112
             E+          ++      YKD            +     I+   +++L      A+
Sbjct: 126 KPELHAVIAVQCQSDSLIICNGYKDENYIELALLAQKMGKRIFIVIEKLNELEIIARIAK 185

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIES--------EIKNVNGLMF 163
           +LH K  + I   ++ S       +    S+ G    + +E+            +  + F
Sbjct: 186 RLHVKPNIGIRIKLASSGSGKWAESGGDASKFGLTSSELLEALNMLDEKGLHDCLRLIHF 245

Query: 164 HNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
           H   +          L+               ++++  GGG+          +    +  
Sbjct: 246 HIGSQITKIRRIQTALREASQYYINLHKMGYNVDFVDCGGGLGVDYDGTRSSNSESSVNY 305

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTL 244
             ++Y         +A   N    
Sbjct: 306 SIQEYVNDCVYTFVDAANKNNIPH 329


>gi|330501723|ref|YP_004378592.1| arginine decarboxylase [Pseudomonas mendocina NK-01]
 gi|328916010|gb|AEB56841.1| arginine decarboxylase [Pseudomonas mendocina NK-01]
          Length = 637

 Score = 69.0 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/298 (12%), Positives = 87/298 (29%), Gaps = 46/298 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53
           P  +     L + +                 +    L  +K      + +  +       
Sbjct: 70  PLLVRFPDILQDRVRRLTGAFDASIERLEYQSRYTALYPIKVNQQEAVIENIIATQNVSI 129

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
           G  + S  E++                YKD E   +      +  N    + K  + A  
Sbjct: 130 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVALV 189

Query: 114 LHKKIGLRINPSV-------SYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158
           + +   L++ P +       S +    AD     S+ G      +            + +
Sbjct: 190 IEEAAELKVAPQIGLRVRLSSLASSKWADTGGEKSKFGLSAAQILSVVERFRAAGLDQGI 249

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207
             L FH   +  +   +    +   + +G        ++ I +GGG+             
Sbjct: 250 RLLHFHMGSQIANIADYRKGFREAIRYYGELRAMGLPVDHIDVGGGLGVDYDGTHSRNAS 309

Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
             +Y ++D+   + +  +++          I+ E G A+  +   L   V D+  +  
Sbjct: 310 SINYDMRDYADAVVDMLKEFCDRQEIPHPHIFSESGRAMTAHHAVLLVQVTDVERHND 367


>gi|317493783|ref|ZP_07952200.1| arginine decarboxylase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918110|gb|EFV39452.1| arginine decarboxylase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 658

 Score = 69.0 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 78/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A        G  L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINAAFKRARESFGYEGGYFLVYPIKVNQHRRVIESLVNSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        L +   ++   +S++   
Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIKLV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            ++A++L+    L +   +S         +     + G      ++            ++
Sbjct: 207 MEEAERLNVVPRLGVRARLSSQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 267 QLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  +    G+A   +
Sbjct: 327 S-VNYGLNEYANNVIWGIGDACNEH 350


>gi|255692945|ref|ZP_05416620.1| arginine 2-monooxygenase [Bacteroides finegoldii DSM 17565]
 gi|260621256|gb|EEX44127.1| arginine 2-monooxygenase [Bacteroides finegoldii DSM 17565]
          Length = 630

 Score = 69.0 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/336 (11%), Positives = 98/336 (29%), Gaps = 49/336 (14%)

Query: 5   PYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L N ++          +  G K    ++  +K      + + +  +     
Sbjct: 59  PMLVRFPDILDNRIEKMSSCFKQAAEEYGYKAQNFIIYPIKVNQMRPVVEEIISHGKKFN 118

Query: 53  DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLN 105
            G  + S  E+          ++      YKD            +     ++   +++L 
Sbjct: 119 LGLEAGSKPELHAVIAVNTDSDSLIVCNGYKDESYIELALLAQKMGKRIFLVVEKMNELK 178

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK-------- 156
                A++L+ +  + I   ++ S     + +    S+ G    + +E+           
Sbjct: 179 LIAKMAKQLNVEPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDFLESKGMKD 238

Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213
            +  + FH   +    +              +      ++E++ +GGG+           
Sbjct: 239 CLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHSMGFKVEFVDIGGGLGVDYDGTRSSS 298

Query: 214 FCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDISENI 255
               +    ++Y                     I  E G A+  + + L   VL+ +   
Sbjct: 299 SEGSVNYSIQEYVNDSISTLVDVSDKNGIPHPNIITESGRALTAHHSVLIFEVLETATLP 358

Query: 256 KNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAM 291
           +     + + +AH     LY    T+  N       
Sbjct: 359 EWDDEEEIAPDAHELVQELYAIWDTLNQNKMLEAWH 394


>gi|281422617|ref|ZP_06253616.1| arginine 2-monooxygenase [Prevotella copri DSM 18205]
 gi|281403287|gb|EFB33967.1| arginine 2-monooxygenase [Prevotella copri DSM 18205]
          Length = 630

 Score = 69.0 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/261 (10%), Positives = 73/261 (27%), Gaps = 28/261 (10%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
           ++D  ++          ++  G K    ++  +K      + + +  +      G    S
Sbjct: 67  ILD-NRIEKTASCFQKAKEEYGYKGENFVIYPIKVNQMQPVVEEIISHGKKFNLGLEVGS 125

Query: 60  LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112
             E+          ++      YKD            +     I+   +++L+  +  A+
Sbjct: 126 KPELHAVIAVQAQSDSLIICNGYKDESYIELALLAQKMGKRIFIVVEKLNELDIIEKVAK 185

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESE--------IKNVNGLMF 163
           KL+ K  + I   ++ S       +    S+ G    + + +            +  + F
Sbjct: 186 KLNVKPNIGIRIKLASSGSGKWAESGGDASKFGLTSAELLTALKKIDEMGFHDCLRLIHF 245

Query: 164 HNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
           H   +                           ++++  GGG+               +  
Sbjct: 246 HIGSQITKIRRIQTALREAAQFYISLHKMGYNVDFVDCGGGLGVDYDGTRSSSSESSVNY 305

Query: 221 FSEKYSVQIYLEPGEAIVTNT 241
             ++Y         +A   N 
Sbjct: 306 SIQEYVNDCVYTFVDAASKNN 326


>gi|22297073|gb|AAM94460.1| ornithine decarboxylase [Phaseolus vulgaris]
          Length = 251

 Score = 69.0 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/236 (13%), Positives = 65/236 (27%), Gaps = 10/236 (4%)

Query: 35  ALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEID--AVLS 91
           A+KC         L         +S  E+          E   +    K       A   
Sbjct: 2   AVKCNPEPSFLSMLAAMGSNFDCASRAEIEYVLSLGISPERIVFANPCKPESDIIFAEKV 61

Query: 92  NCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI 151
             +   +++  ++ K K    K    + ++     +    +            E      
Sbjct: 62  GVNLTTYDSEDEVYKIKKHHPKCELLLRIKPMNDGNARCPMGPKY-GALPEEIEPLLRIA 120

Query: 152 ESEIKNVNGLMFHNNCE----NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGI--HFT 205
           ++    V+G+ FH        N      +A  +  E      ++++  + +GGG      
Sbjct: 121 QASRLTVSGVSFHIGSGDADSNAYLGAIAAAKQVFETADKFGMSKMNVLDIGGGFTSGHQ 180

Query: 206 DKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV 261
                        + FS +  + I  EPG        TL TT++            
Sbjct: 181 FTTAATAVKSALQQHFSNEPELTIIAEPGRFFAETAFTLATTIIGKRVRGDLREYW 236


>gi|325927339|ref|ZP_08188593.1| arginine decarboxylase [Xanthomonas perforans 91-118]
 gi|325542340|gb|EGD13828.1| arginine decarboxylase [Xanthomonas perforans 91-118]
          Length = 628

 Score = 69.0 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 51/364 (14%), Positives = 103/364 (28%), Gaps = 54/364 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53
           P  +     L   L         A        G   +  +K     G+  TL  +     
Sbjct: 59  PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLAGHHGEGF 118

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------F 107
           G  + S  E+M                YKD E   +      +   T   + K       
Sbjct: 119 GLEAGSKPELMAVLALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELTLV 178

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158
            ++A+ L  K GL +   ++         +     + G   +  ++            ++
Sbjct: 179 LEEARALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADSL 238

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC 215
           N L FH   +  +    +  ++   + F        +I  + +GGG+    +    + +C
Sbjct: 239 NLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSYC 298

Query: 216 QR--------------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
                           L    E++     +I  E G A+  +   L   V ++ +  +  
Sbjct: 299 SINYGLHSYASNIVQPLASACEEHGLAPPRIVTECGRAMTAHHAVLIANVSEVEQAPEGR 358

Query: 259 VIVDSSVE----AHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313
           V      E     H+ +          +            G   L+    G+    +  +
Sbjct: 359 VPDAHDDEPAAIRHLREIHDELDVRPAVELFQEAQHFHAEG---LSAYALGQIDLPQRAR 415

Query: 314 IGDR 317
           I D 
Sbjct: 416 IDDL 419


>gi|260172461|ref|ZP_05758873.1| arginine decarboxylase [Bacteroides sp. D2]
 gi|315920755|ref|ZP_07916995.1| biosynthetic arginine decarboxylase [Bacteroides sp. D2]
 gi|313694630|gb|EFS31465.1| biosynthetic arginine decarboxylase [Bacteroides sp. D2]
          Length = 630

 Score = 69.0 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/316 (11%), Positives = 95/316 (30%), Gaps = 49/316 (15%)

Query: 2   IKTPYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM- 52
           + +P  +     L N ++          +  G K    ++  +K      + + +  +  
Sbjct: 56  VASPMLIRFPDILDNRIEKMSSCFKQAAEEYGYKAENFIIYPIKVNQMRPVVEEIISHGK 115

Query: 53  ---DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVS 102
               G  + S  E+          ++      YKD            +     ++   ++
Sbjct: 116 KFNLGLEAGSKPELHAVIAVNTDSDSLIVCNGYKDESYIELALLAQKMGKRIFLVVEKMN 175

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK----- 156
           +L      A++L+ +  + I   ++ S     + +    S+ G    + +E+        
Sbjct: 176 ELKLIAKMAKQLNVQPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDFLESKG 235

Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
               +  + FH   +    +              +       +E++ +GGG+        
Sbjct: 236 MKDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHSMGFNVEFVDIGGGLGVDYDGTR 295

Query: 211 VKDFCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDIS 252
             +    +    ++Y                     I  E G A+  + + L   VL+ +
Sbjct: 296 SSNSEGSVNYSIQEYVNDSISTLVDVSDKNGIPHPNIITESGRALTAHHSVLIFEVLETA 355

Query: 253 ENIKNLVIVDSSVEAH 268
              +     + + +AH
Sbjct: 356 TLPEWDDEEEIAPDAH 371


>gi|114319236|ref|YP_740919.1| arginine decarboxylase [Alkalilimnicola ehrlichii MLHE-1]
 gi|122312750|sp|Q0ACK8|SPEA_ALHEH RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|114225630|gb|ABI55429.1| arginine decarboxylase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 628

 Score = 69.0 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/292 (12%), Positives = 83/292 (28%), Gaps = 46/292 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMDG-- 54
           P  +     L + +D+     + A        G + +  +K      + + + ++ +G  
Sbjct: 61  PVLVRFLDILHDRVDSLCQAFRQAMVEDGYRGGYRAVYPIKVNQQRRVVEEIIRHGNGRV 120

Query: 55  -TTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVL------SNCDTIIFNTVSQLNKF 107
              + S  E+M                YKD E   +            ++    S+L   
Sbjct: 121 GLEAGSKPELMAVLALTPPGGTVVCNGYKDREYVRLALRGRQLGLQVHLVIEKASELELV 180

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158
            ++A  L     L +   ++               + G      +    +         +
Sbjct: 181 LEEAAALGVTPSLGMRVRLATIGAGKWQNTGGEKSKFGLTAAQALAVVDRLRAAGCLDWL 240

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207
             L FH   +  +       ++   + +         +E + +GGG+    +        
Sbjct: 241 RLLHFHLGSQIPNIRDIRRGMREAARYYAELRALGAPVETVDVGGGLGVDYEGSRSRSFC 300

Query: 208 -------DYPVKDFCQRLKEFSEK--YSVQIYLEPGEAIVTNTTTLNTTVLD 250
                  +Y         +   ++      I  E G A+  +   L T V+D
Sbjct: 301 SMNYTVAEYAHNVVHALWQVCEDEGLPHPDIITESGRAMTAHHAVLITDVID 352


>gi|160883937|ref|ZP_02064940.1| hypothetical protein BACOVA_01911 [Bacteroides ovatus ATCC 8483]
 gi|156110667|gb|EDO12412.1| hypothetical protein BACOVA_01911 [Bacteroides ovatus ATCC 8483]
          Length = 630

 Score = 69.0 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/316 (11%), Positives = 95/316 (30%), Gaps = 49/316 (15%)

Query: 2   IKTPYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM- 52
           + +P  +     L N ++          +  G K    ++  +K      + + +  +  
Sbjct: 56  VASPMLIRFPDILDNRIEKMSSCFKQAAEEYGYKAENFIIYPIKVNQMRPVVEEIISHGK 115

Query: 53  ---DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVS 102
               G  + S  E+          ++      YKD            +     ++   ++
Sbjct: 116 KFNLGLEAGSKPELHAVIAVNTDSDSLIVCNGYKDESYIELALLAQKMGKRIFLVVEKMN 175

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK----- 156
           +L      A++L+ +  + I   ++ S     + +    S+ G    + +E+        
Sbjct: 176 ELKLIAKMAKQLNVQPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDFLESKG 235

Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
               +  + FH   +    +              +       +E++ +GGG+        
Sbjct: 236 MKDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHSMGFNVEFVDIGGGLGVDYDGTR 295

Query: 211 VKDFCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDIS 252
             +    +    ++Y                     I  E G A+  + + L   VL+ +
Sbjct: 296 SSNSEGSVNYSIQEYVNDSISTLVDVSDKNGIPHPNIITESGRALTAHHSVLIFEVLETA 355

Query: 253 ENIKNLVIVDSSVEAH 268
              +     + + +AH
Sbjct: 356 TLPEWDDEEEIAPDAH 371


>gi|68066212|ref|XP_675089.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56494069|emb|CAI02605.1| hypothetical protein PB300842.00.0 [Plasmodium berghei]
          Length = 578

 Score = 69.0 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 53/314 (16%), Positives = 98/314 (31%), Gaps = 19/314 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I T    I+ QK+L              V    A+K      +   L         +S+ 
Sbjct: 27  IDTSVICINLQKILLQYIRFKRNLPR--VTPFYAVKSNDDEVVLKFLYGLNCSFDCASIG 84

Query: 62  E---VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-QKLHKK 117
           E   ++        +   Y    K           + I   T   +++ K          
Sbjct: 85  EINKLITLLPNISTDRIIYANTIKSPASLKYAKEKN-INLCTFDNIDELKKICKYHPTCS 143

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
           + LRIN      K  ++          EK     +    N+ G+ FH     K+   F  
Sbjct: 144 LLLRINIDFKNYKSYMSSKYGANEYEWEKILKFGKENNMNIIGVSFHVGSNTKNIFDFCQ 203

Query: 178 MLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
            +K   + F        + E +++GGG       YP +      K+  EK+   +  E  
Sbjct: 204 AIKLSREVFNISHRLGYKFEILNMGGG-------YPEELEYDFAKKNEEKHYCTLNEEEL 256

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCG 294
           +  + +      +V+  + N  N   +  ++   + D+        +   + P   MV  
Sbjct: 257 KKYIMSFL-NEKSVIKKNYNFYNFEKIALAINMSI-DHYFKDIKDQLRIISEPGRYMVAS 314

Query: 295 RSCLAGDIFGEFHF 308
            S LA  + G+   
Sbjct: 315 SSTLAAKVIGKRCP 328



 Score = 60.9 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 18/47 (38%)

Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
            + G+SC   D+     +     I D I +E    Y     + FNG 
Sbjct: 514 NIFGQSCDGLDMITSSTYLPECNINDWIIYEYTGAYTFVSSSNFNGF 560


>gi|237720425|ref|ZP_04550906.1| arginine decarboxylase [Bacteroides sp. 2_2_4]
 gi|293370432|ref|ZP_06616985.1| arginine 2-monooxygenase [Bacteroides ovatus SD CMC 3f]
 gi|299147088|ref|ZP_07040155.1| arginine 2-monooxygenase [Bacteroides sp. 3_1_23]
 gi|229450176|gb|EEO55967.1| arginine decarboxylase [Bacteroides sp. 2_2_4]
 gi|292634424|gb|EFF52960.1| arginine 2-monooxygenase [Bacteroides ovatus SD CMC 3f]
 gi|298514973|gb|EFI38855.1| arginine 2-monooxygenase [Bacteroides sp. 3_1_23]
          Length = 630

 Score = 69.0 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/316 (11%), Positives = 95/316 (30%), Gaps = 49/316 (15%)

Query: 2   IKTPYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM- 52
           + +P  +     L N ++          +  G K    ++  +K      + + +  +  
Sbjct: 56  VASPMLIRFPDILDNRIEKMSSCFKQAAEEYGYKAENFIIYPIKVNQMRPVVEEIISHGK 115

Query: 53  ---DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVS 102
               G  + S  E+          ++      YKD            +     ++   ++
Sbjct: 116 KFNLGLEAGSKPELHAVIAVNTDSDSLIVCNGYKDESYIELALLAQKMGKRIFLVVEKMN 175

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK----- 156
           +L      A++L+ +  + I   ++ S     + +    S+ G    + +E+        
Sbjct: 176 ELKLIAKMAKQLNVQPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDFLESKG 235

Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
               +  + FH   +    +              +       +E++ +GGG+        
Sbjct: 236 MKDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHSMGFNVEFVDIGGGLGVDYDGTR 295

Query: 211 VKDFCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDIS 252
             +    +    ++Y                     I  E G A+  + + L   VL+ +
Sbjct: 296 SSNSEGSVNYSIQEYVNDSISTLVDVSDKNGIPHPNIITESGRALTAHHSVLIFEVLETA 355

Query: 253 ENIKNLVIVDSSVEAH 268
              +     + + +AH
Sbjct: 356 TLPEWDDEEEIAPDAH 371


>gi|322834222|ref|YP_004214249.1| arginine decarboxylase [Rahnella sp. Y9602]
 gi|321169423|gb|ADW75122.1| arginine decarboxylase [Rahnella sp. Y9602]
          Length = 660

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 78/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L +     G
Sbjct: 88  PALFCFPQILQHRLRSINAAFKRARESFGYEGDYFLVYPIKVNQHRRVIESLVESGEPLG 147

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        L +   ++   ++++   
Sbjct: 148 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMTEIKLV 207

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158
            ++A++L+    L +   +S         +     + G      ++            ++
Sbjct: 208 LEEAERLNVIPRLGVRARLSSQGSGKWQSSGGEKSKFGLAASQVLQLVEMLREAGRLESL 267

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 268 QLLHFHLGSQLANIRDISTGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 327

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  +    G+A   +
Sbjct: 328 S-VNYGLNEYANNVIWGIGDACNEH 351


>gi|284008358|emb|CBA74748.1| biosynthetic arginine decarboxylase [Arsenophonus nasoniae]
          Length = 635

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/310 (12%), Positives = 91/310 (29%), Gaps = 46/310 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     + A           L+  +K      + +TL +     G
Sbjct: 63  PALFCFPQILQHRLRSINAAFERARRDYGYQGDYFLVYPIKVNQQRRVIETLVRSGEPLG 122

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        L +   ++   +++++  
Sbjct: 123 LEAGSKAELMAVLAHAGMTKSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMTEIDLV 182

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            D+A++L     L +   ++         +     + G      ++           +++
Sbjct: 183 LDEAKRLDVIPRLGVRARLASQGSGKWQASGGEKSKFGLAAAQVLQLVDTLRSVGRLESL 242

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK-------- 207
             L FH   +    +     +        E      +IE   +GGG+    +        
Sbjct: 243 QLLHFHLGSQMSNIRDIATGARESARFYVELHKLGVKIECFDVGGGLGVDYEGTRSQSDC 302

Query: 208 ------DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
                 +    +    + E  +++      +  E G A+  + T L + V+ +  N    
Sbjct: 303 SVNYGLNEYANNVIWAIGEACDEHGLGHPTVITESGRALTAHHTVLVSNVIGVERNEFTK 362

Query: 259 VIVDSSVEAH 268
           +         
Sbjct: 363 ITPPPKDTEL 372


>gi|302523310|ref|ZP_07275652.1| orn/DAP/Arg decarboxylase 2 [Streptomyces sp. SPB78]
 gi|302432205|gb|EFL04021.1| orn/DAP/Arg decarboxylase 2 [Streptomyces sp. SPB78]
          Length = 507

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 19/150 (12%), Positives = 44/150 (29%), Gaps = 4/150 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           + +P  ++  Q+ + N+      R    ++  +  A K   +  +   L     G   +S
Sbjct: 8   LGSPLNVVLPQQAVENVRRFEAARDRHHLRGTVYFAHKANRSSALVRALATSGAGLDVAS 67

Query: 60  LYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           L E+  G    F  +        +   +        T+      +L +      +     
Sbjct: 68  LEELRHGLGNGFTPDRIGATGPKEPEFLWLAARTGVTVTVEDQGELERLAALVARYE-LP 126

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCK 148
            +++   +S             SR G    
Sbjct: 127 RVKVQLRLSGFPSQGVRQLSRPSRFGTPFA 156



 Score = 42.8 bits (99), Expect = 0.087,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 39/131 (29%), Gaps = 18/131 (13%)

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA--------------HVPDY 272
             + +EPG A++         V+D+      +  V  ++ A               +   
Sbjct: 307 YDLAVEPGRALMDQCGATLARVVDVRTGPDGIAQVRLAMNADDCALEEHGILVDPLLLPR 366

Query: 273 LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPV-KIGDRISFEDVAGYNINR 330
                     P        + G  CL  D+          +   G+ ++F + AGY ++ 
Sbjct: 367 PGGAPVPDPGPGAATGVY-LHGNLCLESDLITRRLVQLPRLPAPGELLAFANTAGYAMDF 425

Query: 331 KNWFNGINMPT 341
               N    P 
Sbjct: 426 SAQ-NAERRPP 435


>gi|318040729|ref|ZP_07972685.1| arginine decarboxylase [Synechococcus sp. CB0101]
          Length = 645

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/294 (12%), Positives = 82/294 (27%), Gaps = 48/294 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLA--------LKCFAAWGMFDTLNQYM---- 52
           P  +     L + L+      + A  +   A        +KC     + + L        
Sbjct: 66  PLLIRFDDILEDRLERLHAAFERAIAQYGYAGRYQGVFPVKCNQQRHVVEELVSCGRRWH 125

Query: 53  DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105
            G  + S  E+++        E       YKD            +      +     ++ 
Sbjct: 126 FGLEAGSKAELLIALSLIDDPEALLICNGYKDQRYIETAILARRLGRQPVVVIEQADEVE 185

Query: 106 KFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKI--------ESEIK 156
           +    ++ L     + +   +S              ++ G    D +           + 
Sbjct: 186 RIISASRALGAAPFIGVRAKLSSRSTGRWGSSVGDKAKFGLSIPDLLATVEALRQADLLG 245

Query: 157 NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK------ 207
           ++  L FH   +          L+    I  E       + ++ +GGG+           
Sbjct: 246 DLRLLHFHVGSQINDIAVLKDALQEAGQIYVELTKQGAPMGFLDVGGGLGIDYDGSRTAT 305

Query: 208 ----DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLD 250
               +Y ++++   +     +           +  E G AI ++ + L   VL 
Sbjct: 306 AASTNYSLQNYANDVVATVRECCEPHGVALPTLVSESGRAIASHFSVLVFNVLG 359


>gi|313159328|gb|EFR58692.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein
           [Alistipes sp. HGB5]
          Length = 464

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 52/400 (13%), Positives = 116/400 (29%), Gaps = 53/400 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKL--------LLALKCFAAWGMFDTLNQYMDG 54
            TP  +    K+   ++ A  +   A  K+            K      + +   +    
Sbjct: 42  GTPLKITYLPKISQQINRAKRMFNVAMAKVDYKGSYNYCYCTKSSHFSFVLEEAMKNDIH 101

Query: 55  TTSSSLYEVMLGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQ----LN 105
             +SS Y++ + +          + +     +K  +    ++      F           
Sbjct: 102 LETSSAYDIHIINALYDSGIIDKDRYIICNGFKRPQYVENIAQLVNDGFVNTIPVLDNKE 161

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCK----DKIESEIKNVNGL 161
           + +       KK  + I  +           +R   R  +           S+   +  L
Sbjct: 162 ELELFEDSFTKKCKVGIRIACEEEPKFEFYTSRLGIRYNDIIDFYKAKLKNSKKFQLKML 221

Query: 162 MFHNNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIH----------FTDKD 208
            F  N   K    +   L        E      +++ +++GGG            +    
Sbjct: 222 HFFINTGIKDTAYYWNELSKCINVYCELKAICPELDSLNIGGGFPIKNSLNFEYDYEYLT 281

Query: 209 YPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK--NLVIVDSSVE 266
             +    + + + ++     I+ E G   V  +     ++++  +     N  ++DSS  
Sbjct: 282 EEIIAQIKNICQRNDTEEPNIFTEFGSFTVGESGASLYSIVNQKQQNDRENWYMIDSSFI 341

Query: 267 AHVPDYL-LYQESATIYPNTGPYTAM---VCGRSCLAGDIF-----GEFHFEKPVKIG-- 315
             +PD   + Q    +  N          + G +C + D +         F   ++ G  
Sbjct: 342 TTLPDTWGINQRYIMLAVNNWDKEYQRVLLGGLTCDSEDFYNAESHTNAIFLPKLEPGNT 401

Query: 316 DRISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDGT 350
             I F     Y  +    F G     I  P   + + D +
Sbjct: 402 QYIGFFHTGAYQESLG-GFGGIQHCLIPAPKHIIIDRDKS 440


>gi|78049594|ref|YP_365769.1| arginine decarboxylase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|78038024|emb|CAJ25769.1| arginine decarboxylase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
          Length = 645

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 52/364 (14%), Positives = 104/364 (28%), Gaps = 54/364 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53
           P  +     L   L         A        G   +  +K     G+  TL  +     
Sbjct: 76  PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLAGHHGEGF 135

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------F 107
           G  + S  E+M                YKD E   +      +   T   + K       
Sbjct: 136 GLEAGSKPELMAVLALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELTLV 195

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158
            ++A+ L  K GL +   ++         +     + G   +  ++            ++
Sbjct: 196 LEEARALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADSL 255

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC 215
           N L FH   +  +    +  ++   + F        +I  + +GGG+    +    + +C
Sbjct: 256 NLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSYC 315

Query: 216 QR--------------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
                           L    E++     +I  E G A+  +   L   V ++ +  +  
Sbjct: 316 SINYGLHSYASNIVQPLASACEEHGLAPPRIVTECGRAMTAHHAVLIANVSEVEQAPEGR 375

Query: 259 VIVDSSVE----AHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313
           V V    E     H+ +          +            G   L+    G+    +  +
Sbjct: 376 VPVAHDDEPAAIRHLREIHDELDVRPAVELFQEAQHFHAEG---LSAYALGQIDLPQRAR 432

Query: 314 IGDR 317
           I D 
Sbjct: 433 IDDL 436


>gi|218131815|ref|ZP_03460619.1| hypothetical protein BACEGG_03436 [Bacteroides eggerthii DSM 20697]
 gi|317474568|ref|ZP_07933842.1| arginine decarboxylase [Bacteroides eggerthii 1_2_48FAA]
 gi|217986118|gb|EEC52457.1| hypothetical protein BACEGG_03436 [Bacteroides eggerthii DSM 20697]
 gi|316909249|gb|EFV30929.1| arginine decarboxylase [Bacteroides eggerthii 1_2_48FAA]
          Length = 630

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/313 (11%), Positives = 92/313 (29%), Gaps = 49/313 (15%)

Query: 5   PYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L N ++          +  G K    ++  +K      + + +  +     
Sbjct: 59  PMLVRFPDILDNRIEKISCCFRQAAEEYGYKAENFIIYPIKVNQMRPVVEEIISHGKKFN 118

Query: 53  DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLN 105
            G  + S  E+          ++      YKD            +     ++   +++L 
Sbjct: 119 LGLEAGSKPELHAVIAINMNSDSLIICNGYKDESYIELALLAQKMGKRIFLVVEKLNELK 178

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESE--------IK 156
                A++L+ K  + I   ++ S     + +    S+ G    + +E+           
Sbjct: 179 LIAKMAKQLNVKPNIGIRIKLASSGSGKWEDSGGDASKFGLSSSELLEALDFMADKGMQD 238

Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213
            +  + FH   +    +              +      ++E++ +GGG+          +
Sbjct: 239 CLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHSMGFKVEFVDIGGGLGVDYDGTRSSN 298

Query: 214 FCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDISENI 255
               +    ++Y                     I  E G A+  + + L   VL+ +   
Sbjct: 299 SEGSVNYSIQEYVNDSISTLVDASDKNGIPHPNIITESGRALTAHHSVLIFEVLETTNLP 358

Query: 256 KNLVIVDSSVEAH 268
           +     + +   H
Sbjct: 359 EWDDEEEVTENDH 371


>gi|124024519|ref|YP_001018826.1| arginine decarboxylase [Prochlorococcus marinus str. MIT 9303]
 gi|166220851|sp|A2CDK1|SPEA_PROM3 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|123964805|gb|ABM79561.1| Orn/DAP/Arg decarboxylases family 2 [Prochlorococcus marinus str.
           MIT 9303]
          Length = 648

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/319 (11%), Positives = 92/319 (28%), Gaps = 51/319 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLA--------LKCFAAWGMFDTLNQYM---- 52
           P  +     L + L+      + A  K   A        +KC     + + L +      
Sbjct: 69  PLLIRFDDILEDRLEKLHSAFEQAISKYGYAGRYQGVFPVKCNQQRHVVEQLVESGRHWH 128

Query: 53  DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105
            G  + S  E+++        E       YKD            +      +     ++ 
Sbjct: 129 FGLEAGSKAELLIALSLVNDPEALLICNGYKDQRYIETAILARRLGRQPVVVIEQPDEVE 188

Query: 106 KFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKIE--------SEIK 156
           +    +Q+L     + +   ++       +      ++ G    D +           + 
Sbjct: 189 RIIRSSQELGAAPFIGVRAKLTTRSTGHWSSSVGEKAKFGLSFPDLLSTVEALRQADLLS 248

Query: 157 NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK------ 207
           ++  L FH   +          ++    I  E       + ++ +GGG+           
Sbjct: 249 DLRLLHFHIGSQINDIAVLKDAIQEAGQIYVELTKLGAPMGYLDVGGGLGVDYDGSRSAS 308

Query: 208 ----DYPVKDFCQRLKEFSEKYSVQ-------IYLEPGEAIVTNTTTLNTTVLD---ISE 253
               +Y ++++   +     +           +  E G AI ++ + L   VL    +  
Sbjct: 309 AASTNYSLQNYANDVVATVRECCKPHGITLPILVSESGRAIASHFSILVFDVLGTGTVPG 368

Query: 254 NIKNLVIVDSSVEAHVPDY 272
            + N    +     ++ + 
Sbjct: 369 AVPNQTGEEPLTIHNLRET 387


>gi|311747334|ref|ZP_07721119.1| arginine decarboxylase, biosynthetic [Algoriphagus sp. PR1]
 gi|311302638|gb|EAZ83215.2| arginine decarboxylase, biosynthetic [Algoriphagus sp. PR1]
          Length = 462

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 56/406 (13%), Positives = 118/406 (29%), Gaps = 53/406 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMDG 54
            TP  L    K+  N+  A     NA                K      + D   +    
Sbjct: 41  GTPLKLTYLPKISENIQKAKTYFNNAIQAHDYQGKYTYCYCTKSSHFSFVLDEALKNDIH 100

Query: 55  TTSSSLYEVMLGHEKFGGETHA---YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA 111
             +SS +++ L    +         + +              + +    V+ +    + +
Sbjct: 101 IETSSTFDIPLVRSLYAKGKITKNTFIICNGFKRDLYKQYIAELLNDGFVNCVPILDNLS 160

Query: 112 --QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--------GL 161
                 + + +     +  +           SRLG +  D I+   + +          L
Sbjct: 161 EIDYYLEHVKVPFQVGIRIAADEEPKFGFYTSRLGVRYNDIIKLYEEKIKDHPLVSLKML 220

Query: 162 MFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDK---DYPVKDFC 215
            F  N   K    + + L    +   +       ++ + +GGG         DY  +   
Sbjct: 221 HFFINSGIKDTAYYWSELTRFIQKYVDLKKVAPTLDTMDIGGGWPIKTNVFFDYDYQYMA 280

Query: 216 QRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVE 266
            ++ +  +            I+ E G   V  +  +  +VLD  +  + +   ++D S  
Sbjct: 281 DQIVKNIKWMCAKNNTTEPNIFTEFGSFTVGESGAVLYSVLDEKLQNDKELWYMIDGSFI 340

Query: 267 AHVPDYL-LYQESATIYPNTGPYTAM---VCGRSCLAGDIFGE-----FHFEKPVKIG-- 315
             +PD   L Q+   +  N    T     + G +C + D +         +      G  
Sbjct: 341 TQLPDSWGLNQKYIMLAINNWDETYHNINLGGLTCDSMDYYNSEAHQFNIYLPKPDNGKK 400

Query: 316 DRISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDGTIKAIRE 356
             + F     Y  +    + G     I  P   + + D   K +  
Sbjct: 401 QYLGFFHTGAYQESLG-GYGGIQHCLIPAPKHVLIDRDEDGKVVHR 445


>gi|317968210|ref|ZP_07969600.1| arginine decarboxylase [Synechococcus sp. CB0205]
          Length = 672

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/314 (12%), Positives = 87/314 (27%), Gaps = 48/314 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLA--------LKCFAAWGMFDTLNQYM---- 52
           P  +     L + L+      + A  +   A        +KC     + + L        
Sbjct: 93  PLLIRFDDILEDRLERLHGAFERAIAQYGYAGRYQGVFPVKCNQQRHVVEELVSCGKRWH 152

Query: 53  DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105
            G  + S  E+++        E       YKD            +      +     ++ 
Sbjct: 153 FGLEAGSKAELLIALSLVDDPEALLICNGYKDQRYIETAILARRLGRQPVVVIEQADEVE 212

Query: 106 KFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKI--------ESEIK 156
           +    +Q+L     + I   +S              ++ G    + +         + + 
Sbjct: 213 RIIQASQELGAAPFIGIRAKLSSRSTGRWGSSVGAKAKFGLAIPELLATVEALKKANLLN 272

Query: 157 NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK------ 207
           ++  L FH   +          L+    I  E       + ++ +GGG+           
Sbjct: 273 DLKLLHFHVGSQINDIAVLKDALQEAGQIYVELTKLGAPMGFLDVGGGLGVDYDGSRTAT 332

Query: 208 ----DYPVKDFCQRLKEFSEKYSVQ-------IYLEPGEAIVTNTTTLNTTVLDISENIK 256
               +Y ++++   +     +           +  E G AI ++ + L   VL  S    
Sbjct: 333 SASTNYSLQNYANDVVATVRECCDPHGVPVPTLVSESGRAIASHFSVLVFNVLGQSTVPS 392

Query: 257 NLVIVDSSVEAHVP 270
                +      V 
Sbjct: 393 GCPEAEGEEALTVR 406


>gi|148240725|ref|YP_001226112.1| arginine decarboxylase [Synechococcus sp. WH 7803]
 gi|147849264|emb|CAK24815.1| Arginine decarboxylase [Synechococcus sp. WH 7803]
          Length = 636

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/314 (10%), Positives = 85/314 (27%), Gaps = 48/314 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLA--------LKCFAAWGMFDTLNQYM---- 52
           P  +     L + L+        A      A        +KC     + + + +      
Sbjct: 66  PLLIRFDDILEDRLERLHAAFDRAIAHYGYAGRYQGVFPVKCNQQRHVVERIVESGQRWH 125

Query: 53  DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105
            G  + S  E+++        +       YKD            +      +     ++ 
Sbjct: 126 FGLEAGSKAELLIALSLLNDPDALLICNGYKDQRYLETAILARKLGRQPVVVIEQPDEVE 185

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIK 156
           +    +  L     + I   +S         +     + G    + +++         +K
Sbjct: 186 RIIRASDHLGAAPMIGIRARLSTRSTGRWGSSVGDRAKFGLSIPELLDTTEALRNAGLLK 245

Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK------ 207
            +  L FH   +          L+   + +G        + ++ +GGG+           
Sbjct: 246 ELRLLHFHIGSQINDIAVLKDALQEAGQIYGELHRLGAPMGFLDVGGGLGVDYDGSRSAT 305

Query: 208 ----DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
               +Y ++++   +    ++           +  E G A+ ++ + L   +L       
Sbjct: 306 AASTNYSLQNYANDVVATVKECCEPSGVPVPTLVSESGRALASHFSVLVFDILGTGAAPD 365

Query: 257 NLVIVDSSVEAHVP 270
                       + 
Sbjct: 366 ERPEPMDDDPLILR 379


>gi|115397045|ref|XP_001214114.1| hypothetical protein ATEG_04936 [Aspergillus terreus NIH2624]
 gi|114192305|gb|EAU34005.1| hypothetical protein ATEG_04936 [Aspergillus terreus NIH2624]
          Length = 292

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/281 (12%), Positives = 76/281 (27%), Gaps = 26/281 (9%)

Query: 69  KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY 128
                   +    K              +    +       K      ++ LRI      
Sbjct: 8   GVDPSRIIFANPCKSALSLVFAQMSGVNLATFDNLDELDSIKTYHPDCRLVLRIFACDDD 67

Query: 129 SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH 188
           +   L+           +  ++      NV G+ FH      +   +   ++N +  F  
Sbjct: 68  ALLNLSQKFGAPEGSLLRLLERARELDLNVTGVSFHVGTGACNAAPYVMAIQNAKVVFEQ 127

Query: 189 F---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLN 245
                  +  + +GGG    + +         L +   +  ++I  EPG   V    TL 
Sbjct: 128 AKRLGYDMNLLDIGGGFQDHNFEQIACHVAVALNDGLPR-DIRIIAEPGRYYVRTAYTLV 186

Query: 246 TTVLDISEN--------IKNLVIVDSSVEAHVP-------------DYLLYQESATIYPN 284
             V+                L   D    + +                  +         
Sbjct: 187 CKVISRRRQISDPANLEPDMLYQNDGVYGSFMNVLIEKERLQPSLIPGSRHLHQHASKRR 246

Query: 285 TGPYTAMVCGRSCLAGDIFGEF-HFEKPVKIGDRISFEDVA 324
           +G +   + G +C + D   +   F+  V +GD + + ++ 
Sbjct: 247 SGQHCYSIWGPTCDSIDCVTKQTVFDSEVNVGDWLKYSNMG 287


>gi|148243477|ref|YP_001228634.1| arginine decarboxylase [Synechococcus sp. RCC307]
 gi|166220861|sp|A5GWM2|SPEA_SYNR3 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|147851787|emb|CAK29281.1| Arginine decarboxylase [Synechococcus sp. RCC307]
          Length = 640

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/313 (11%), Positives = 90/313 (28%), Gaps = 48/313 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52
           P  +  +  L + L+      + A          + +  +KC     + + L +      
Sbjct: 69  PLLIRFEDILEDRLERLHGAFERAIAQYGYGGHYQGVFPVKCNQQRHVVEQLVESGRRWH 128

Query: 53  DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105
            G  + S  E+++        +       YKD            +      +     ++ 
Sbjct: 129 FGLEAGSKAELLIALSLLDDPKALLICNGYKDQRYIETAILARQLGRQPVVVIEQADEVP 188

Query: 106 KFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKI--------ESEIK 156
           +  + ++ L     + +   +S              ++ G    D +           + 
Sbjct: 189 RIIEASRNLGAAPLIGVRAKLSTRSTGRWGSSVGEKAKFGLSIPDLLATVEALRDADLLG 248

Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDK------ 207
           ++  L FH   +          L+       +       + ++ +GGG+           
Sbjct: 249 DLRLLHFHVGSQICDIAVLKDALQEAGQLYVQLASLGAPMGFLDVGGGLGVDYDGSRSAT 308

Query: 208 ----DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
               +Y ++++   +     +           +  E G AI ++ + L   VL  S   +
Sbjct: 309 AASTNYSLQNYANDVVATIRECCEPQGIVVPTLVSESGRAIASHFSVLVFNVLGQSGVNQ 368

Query: 257 NLVIVDSSVEAHV 269
             +      EA +
Sbjct: 369 PSIPEAVEGEALI 381


>gi|297738878|emb|CBI28123.3| unnamed protein product [Vitis vinifera]
          Length = 180

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 29/61 (47%)

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
           + +T  +++ V G +C + D+         + + D + F ++  Y  +    FNG ++ +
Sbjct: 110 FCSTAKFSSTVFGPTCDSTDMVVAESQLPELHMNDVLVFYNMGAYTASAGTRFNGFDISS 169

Query: 342 I 342
           I
Sbjct: 170 I 170


>gi|295835319|ref|ZP_06822252.1| pyridoxal-dependent decarboxylase, C- sheet domain-containing
           protein [Streptomyces sp. SPB74]
 gi|295825426|gb|EDY43323.2| pyridoxal-dependent decarboxylase, C- sheet domain-containing
           protein [Streptomyces sp. SPB74]
          Length = 531

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/225 (11%), Positives = 59/225 (26%), Gaps = 11/225 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           + +P  ++  Q+ + N       R    ++  +  A K   +  +   L     G   +S
Sbjct: 32  LGSPLNVVLPQQAVENARRFEAARDRHHLRGTVYFAHKANRSSALVRALATSRAGLDVAS 91

Query: 60  LYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-----QK 113
           L E+  G    F  +        +   +        T+      +L +           +
Sbjct: 92  LEELAHGLGSGFTPDRIGATGPKEPEFLWLAARTGVTVTVEDQGELERLAALVARYGLPR 151

Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFL 173
              ++ L   PS    +                  D +E   + V  +    + +     
Sbjct: 152 AKVQLRLSGFPSQGVRQLSRPSRFGTPFASLRTLLDAVERLRERVEVVGVAYHIDTTGLP 211

Query: 174 CFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFC 215
                L    +          +   + +GGG   +      +   
Sbjct: 212 EKVLALDGCLRALDLCLERGLRPATVDIGGGFGVSHLADAREWEA 256


>gi|150003904|ref|YP_001298648.1| arginine decarboxylase [Bacteroides vulgatus ATCC 8482]
 gi|212692729|ref|ZP_03300857.1| hypothetical protein BACDOR_02227 [Bacteroides dorei DSM 17855]
 gi|237709425|ref|ZP_04539906.1| arginine decarboxylase [Bacteroides sp. 9_1_42FAA]
 gi|237724971|ref|ZP_04555452.1| biosynthetic arginine decarboxylase [Bacteroides sp. D4]
 gi|254880856|ref|ZP_05253566.1| arginine decarboxylase [Bacteroides sp. 4_3_47FAA]
 gi|265754624|ref|ZP_06089676.1| arginine decarboxylase [Bacteroides sp. 3_1_33FAA]
 gi|294775058|ref|ZP_06740587.1| arginine 2-monooxygenase [Bacteroides vulgatus PC510]
 gi|319639866|ref|ZP_07994595.1| hypothetical protein HMPREF9011_00192 [Bacteroides sp. 3_1_40A]
 gi|166220848|sp|A6L012|SPEA_BACV8 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|149932328|gb|ABR39026.1| putative arginine decarboxylase [Bacteroides vulgatus ATCC 8482]
 gi|212664665|gb|EEB25237.1| hypothetical protein BACDOR_02227 [Bacteroides dorei DSM 17855]
 gi|229436709|gb|EEO46786.1| biosynthetic arginine decarboxylase [Bacteroides dorei 5_1_36/D4]
 gi|229456481|gb|EEO62202.1| arginine decarboxylase [Bacteroides sp. 9_1_42FAA]
 gi|254833649|gb|EET13958.1| arginine decarboxylase [Bacteroides sp. 4_3_47FAA]
 gi|263234738|gb|EEZ20306.1| arginine decarboxylase [Bacteroides sp. 3_1_33FAA]
 gi|294451102|gb|EFG19573.1| arginine 2-monooxygenase [Bacteroides vulgatus PC510]
 gi|317388530|gb|EFV69380.1| hypothetical protein HMPREF9011_00192 [Bacteroides sp. 3_1_40A]
          Length = 630

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/306 (10%), Positives = 89/306 (29%), Gaps = 46/306 (15%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
           ++D  ++    +         G K    ++  +K      + + +  +      G  + S
Sbjct: 67  ILD-NRIEKIANCFKQASDEYGYKAQNFIIYPIKVNQMRPVVEEIISHGKKFNLGLEAGS 125

Query: 60  LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112
             E+          ++      YKD            +     ++   +++L      A+
Sbjct: 126 KPELHAVIAVNTDSDSLIICNGYKDESYIELALLAQKMGKRIFLVVEKMNELRLIAKMAK 185

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK--------NVNGLMF 163
           +L+ +  + I   ++ S     + +    S+ G    + +E+            +  + F
Sbjct: 186 QLNVRPNIGIRIKLASSGSGKWEDSGGDASKFGLTSSELLEALDFLEKKDMKDCLKLIHF 245

Query: 164 HNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
           H   +    +              +       +E++ +GGG+          +    +  
Sbjct: 246 HIGSQVTKIRRIKTALREASQFYVQLHVMGFNVEFVDIGGGLGVDYDGTRSANSESSVNY 305

Query: 221 FSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD 262
             ++Y                     I  E G ++  + + L   VL+ +   +     +
Sbjct: 306 SIQEYVNDSISTLVDASDKNGIPHPNIITESGRSLTAHHSVLIFEVLETATLPEMDEDFE 365

Query: 263 SSVEAH 268
                H
Sbjct: 366 VGENDH 371


>gi|254497528|ref|ZP_05110320.1| truncated bifunctional aspartate kinase/diaminopimelate
          decarboxylase protein [Legionella drancourtii LLAP12]
 gi|254353245|gb|EET11988.1| truncated bifunctional aspartate kinase/diaminopimelate
          decarboxylase protein [Legionella drancourtii LLAP12]
          Length = 103

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 23/68 (33%), Gaps = 2/68 (2%)

Query: 4  TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
          TP Y+ +    +      L +       L  A+K      +  TL Q   G    S+ E+
Sbjct: 33 TPCYVYNSTIQIARAKQLLALEAIDN--LFYAIKANPHPTILKTLEQEGIGFECVSMQEL 90

Query: 64 MLGHEKFG 71
              E F 
Sbjct: 91 TRVLELFP 98


>gi|325919711|ref|ZP_08181713.1| arginine decarboxylase [Xanthomonas gardneri ATCC 19865]
 gi|325549819|gb|EGD20671.1| arginine decarboxylase [Xanthomonas gardneri ATCC 19865]
          Length = 628

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 51/364 (14%), Positives = 101/364 (27%), Gaps = 54/364 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53
           P  +     L   L         A        G   +  +K     G+  TL  +     
Sbjct: 59  PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLASHHGEGF 118

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKF 107
           G  + S  E+M                YKD E   +            I+    S+L   
Sbjct: 119 GLEAGSKPELMAVLALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELKLV 178

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158
            ++A+ L  K GL +   ++         +     + G   +  ++             +
Sbjct: 179 LEEARALEVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADCL 238

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +  +    +  ++   + F        +I  + +GGG+    +    + +C
Sbjct: 239 QLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSYC 298

Query: 216 QR--------------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
                           L    E++     +I  E G A+  +   L   V ++ +  +  
Sbjct: 299 SINYGLHSYASNIVQPLANACEEHGLTPPRIVTECGRAMTAHHAVLIANVSEVEQAPEGR 358

Query: 259 VIVDSSVE----AHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313
           V      E     H+ +          +            G   L+    G+       +
Sbjct: 359 VPDAHDDEPAAIRHLREIHDELDVRPAVELFQEAQHFHAEG---LSAYALGQIDLTHRAR 415

Query: 314 IGDR 317
           I D 
Sbjct: 416 IDDL 419


>gi|149196616|ref|ZP_01873670.1| arginine decarboxylase [Lentisphaera araneosa HTCC2155]
 gi|149140296|gb|EDM28695.1| arginine decarboxylase [Lentisphaera araneosa HTCC2155]
          Length = 631

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/312 (12%), Positives = 88/312 (28%), Gaps = 48/312 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAG--------VKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +     L   +        NA          + +  +K      + + +        
Sbjct: 57  PVVIRFHDVLRAQVRNLNLAFDNAIKEMEYQGCYRGVYPIKVNQMREVVEEIVDAGSEFD 116

Query: 54  -GTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLN 105
            G  + S  E++         E+      YKD E          +     ++    S+LN
Sbjct: 117 FGLEAGSKPEILAALAYNTNKESLTILNGYKDEEYMRLALLGVKMGRQCIVVIENFSELN 176

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILA-DPNRPFSRLGEKCKDKIESEI--------K 156
                +++ + +  + +   +S          +   ++ G    + I+S           
Sbjct: 177 LLLKVSKQENIRPLIGLRLKLSSESRGKWASSSGENAKFGLSILEIIKSLKVLEEENMLD 236

Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------ 207
            +  L FH   +    K+          +  +       IE++  GGG+           
Sbjct: 237 CLKLLHFHMGSQIADIKTIKEAIIEGSRVYAKIAKMGFNIEYLDAGGGLAIDYDGSRSSK 296

Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                         +    +++ +  E     I  E G AI  + + + T V+DI +   
Sbjct: 297 DSSRNYRLDEYAMDLVLSIKQICDDEEVAHPTIVTESGRAITAHHSCVVTNVIDIKKKHH 356

Query: 257 NLVIVDSSVEAH 268
               +      H
Sbjct: 357 EDFEIQVQSSDH 368


>gi|260910993|ref|ZP_05917631.1| arginine 2-monooxygenase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260634900|gb|EEX52952.1| arginine 2-monooxygenase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 630

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/264 (10%), Positives = 76/264 (28%), Gaps = 28/264 (10%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
           ++D  ++           +    K    ++  +K      + + +  +      G  + S
Sbjct: 67  ILD-SRIEKTASCFRQASEKYDYKGENFVIYPIKVNQMQPVVEEIISHGRKFNLGLEAGS 125

Query: 60  LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112
             E+          ++      YKD            +     ++   +++L      A+
Sbjct: 126 KPELHAVIAVQCQSDSLIICNGYKDQSYIELALLAQKMGKRIFLVIEKLNELELIARAAK 185

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIES--------EIKNVNGLMF 163
           KL+ +  L I   ++ S     + +    S+ G    + +++            +  + F
Sbjct: 186 KLNVRPNLGIRIKLASSGSGKWEESGGDASKFGLTSSELLQALELLDQKGLHDCLKLIHF 245

Query: 164 HNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
           H   +          L+       +  +    ++++  GGG+               +  
Sbjct: 246 HIGSQITKIRRIQTALREASQFYVQLHNMGYDVDFVDCGGGLGVDYDGTRSPSSESSVNY 305

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTL 244
             ++Y         EA   N    
Sbjct: 306 SIQEYVNDCIYTFVEAANKNGIDH 329


>gi|213620703|ref|ZP_03373486.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 156

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 13/130 (10%), Positives = 32/130 (24%), Gaps = 11/130 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P ++ D   +   +             +  A K  +   +   +        S SL E+ 
Sbjct: 27  PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRAQGVKVDSVSLGEIE 81

Query: 65  LGHEKF-----GGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKI 118
                        +   +     D    A +S     +   +V  L +    +      +
Sbjct: 82  RALAAGYDPQTCPDDIVFTADVIDAATLARVSELHIPVNAGSVDMLTQLGQVSPGHRVWL 141

Query: 119 GLRINPSVSY 128
            +       +
Sbjct: 142 RVNPGFGHGH 151


>gi|322420301|ref|YP_004199524.1| arginine decarboxylase [Geobacter sp. M18]
 gi|320126688|gb|ADW14248.1| arginine decarboxylase [Geobacter sp. M18]
          Length = 635

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/319 (10%), Positives = 90/319 (28%), Gaps = 38/319 (11%)

Query: 12  QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
             L   + +   + KNA          +    +K      + + +  +      G    S
Sbjct: 67  NILEGRIASISRVFKNAIHDNNYPAKYQTFYPIKVNQQRQVVEAIANFGKKYNIGLEVGS 126

Query: 60  LYEVMLGHEKFGGETH-AYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112
             E++       G         YKD E          +    TI+   + +L K  + ++
Sbjct: 127 KPELVAAISMVTGSNIPIICNGYKDTEFIETVLFATRVGYDITIVVEKLFELEKIVEVSK 186

Query: 113 KLHKKIGLRINPSVSYSKFILADPN-RPFSRLGEKCKDKIESEIK--------NVNGLMF 163
           +      L +   +S         +    ++ G +  + I +            V  L F
Sbjct: 187 RTGIVPKLGVRVKLSSKGIGKWSTSGGEDAKFGLRISEIIAAIGMLKENDMLDCVKLLHF 246

Query: 164 HNNCENKSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
           H   +          L    + +         +E++ +GGG+           +   +  
Sbjct: 247 HVGSQITKIDKIKNALIEGTRIYAEMRKLGVNLEFLDIGGGLGVDYDG-SKSSYFSSVNY 305

Query: 221 FSEKYSVQIYLEPGEAI------VTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLL 274
             ++Y+  +  +             N  + +        ++    +++++ +  +PD+  
Sbjct: 306 SLDEYANDVIYQVKNICDDAGVPCPNIISESGRATVAHYSVLVTDVLNNNTQTLMPDFEF 365

Query: 275 YQESATIYPNTGPYTAMVC 293
                     T      + 
Sbjct: 366 ILTEPDKLSPTVKKLVDIY 384


>gi|318079448|ref|ZP_07986780.1| lysine/ornithine decarboxylase [Streptomyces sp. SA3_actF]
          Length = 552

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/150 (12%), Positives = 44/150 (29%), Gaps = 4/150 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           + +P  ++  Q+ + N+      R    ++  +  A K   +  +   L     G   +S
Sbjct: 53  LGSPLNVVLPQQAVENVRRFEAARDRHHLRGTVYFAHKANRSSALVRALATSGAGLDVAS 112

Query: 60  LYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           L E+  G    F  +        +   +        T+      +L +      +     
Sbjct: 113 LEELRHGLGSGFTPDRIGATGPKEPEFLWLAARTGATVTVEDQGELERLAALVARYE-LP 171

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCK 148
            +++   +S             SR G    
Sbjct: 172 RVKVQLRLSGFPSQGVRQLSRPSRFGTPFA 201



 Score = 42.8 bits (99), Expect = 0.087,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 39/131 (29%), Gaps = 18/131 (13%)

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA--------------HVPDY 272
             + +EPG A++         V+D+      +  V  ++ A               +   
Sbjct: 352 YDLAVEPGRALMDQCGATLARVVDVRTGPDGIAQVRLAMNADDCALEEHGILVDPLLLPR 411

Query: 273 LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPV-KIGDRISFEDVAGYNINR 330
                     P        + G  CL  D+          +   G+ ++F + AGY ++ 
Sbjct: 412 PGGAPVPDPGPGAATGVY-LHGNLCLESDLITRRLVQLPRLPAPGELLAFANTAGYAMDF 470

Query: 331 KNWFNGINMPT 341
               N    P 
Sbjct: 471 SAQ-NAERRPP 480


>gi|318056831|ref|ZP_07975554.1| lysine/ornithine decarboxylase [Streptomyces sp. SA3_actG]
          Length = 546

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/150 (12%), Positives = 44/150 (29%), Gaps = 4/150 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           + +P  ++  Q+ + N+      R    ++  +  A K   +  +   L     G   +S
Sbjct: 47  LGSPLNVVLPQQAVENVRRFEAARDRHHLRGTVYFAHKANRSSALVRALATSGAGLDVAS 106

Query: 60  LYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           L E+  G    F  +        +   +        T+      +L +      +     
Sbjct: 107 LEELRHGLGSGFTPDRIGATGPKEPEFLWLAARTGATVTVEDQGELERLAALVARYE-LP 165

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCK 148
            +++   +S             SR G    
Sbjct: 166 RVKVQLRLSGFPSQGVRQLSRPSRFGTPFA 195



 Score = 42.8 bits (99), Expect = 0.087,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 39/131 (29%), Gaps = 18/131 (13%)

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA--------------HVPDY 272
             + +EPG A++         V+D+      +  V  ++ A               +   
Sbjct: 346 YDLAVEPGRALMDQCGATLARVVDVRTGPDGIAQVRLAMNADDCALEEHGILVDPLLLPR 405

Query: 273 LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPV-KIGDRISFEDVAGYNINR 330
                     P        + G  CL  D+          +   G+ ++F + AGY ++ 
Sbjct: 406 PGGAPVPDPGPGAATGVY-LHGNLCLESDLITRRLVQLPRLPAPGELLAFANTAGYAMDF 464

Query: 331 KNWFNGINMPT 341
               N    P 
Sbjct: 465 SAQ-NAERRPP 474


>gi|33239501|ref|NP_874443.1| arginine decarboxylase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
 gi|48474804|sp|Q7VEG4|SPEA_PROMA RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|33237026|gb|AAP99095.1| Arginine decarboxylase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
          Length = 648

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/313 (12%), Positives = 94/313 (30%), Gaps = 48/313 (15%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----N 49
           + TP  L     L + L       +NA          + +  +KC     + + +     
Sbjct: 66  LNTPLLLRFDDILEDRLKKLHQAFENAINQYGYNNDYQGVFPIKCNQQRHVVEEIVTIGR 125

Query: 50  QYMDGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCD------TIIFNTVS 102
           ++  G  + S  E+++        +       YKD                  ++     
Sbjct: 126 KWHFGLEAGSKAELLIALALVNDPKAFLICNGYKDNRYIETTILARQLGRQPIVVIEQSD 185

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVS-YSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           ++ +    +QKL     + I   +S  S     +     S+ G    + +++        
Sbjct: 186 EVGRIIKASQKLGAAPLIGIRAKLSNQSSGRWGNSVGEKSKFGLSIPEILKAVQELTAAG 245

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDK--- 207
               +  L FH   +          L+   +   E       +  + +GGG+        
Sbjct: 246 LLNELILLHFHVGSQINDIAILKNALQEASQIYVELNRLGAPMGHLDVGGGLGVDYDGSR 305

Query: 208 -------DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISE 253
                  +Y ++++   +    ++          ++  E G  + ++ + L   VL  S 
Sbjct: 306 TATSASTNYSLQNYANDVVATIQECCKAKKVKVPKLISESGRFLSSHFSILIFNVLGTSS 365

Query: 254 NIKNLVIVDSSVE 266
               + I  S+  
Sbjct: 366 VPTQIAIETSNEC 378


>gi|149602481|ref|XP_001520918.1| PREDICTED: hypothetical protein, partial [Ornithorhynchus anatinus]
          Length = 146

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 25/59 (42%)

Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
           +T+ + G SC   D   E      + +GD + F+++    +  ++ FN    P I    
Sbjct: 47  FTSSLWGPSCDELDQIVESCLLPELNVGDWLVFDNMGADTLREQSTFNDFQRPAIYYMM 105


>gi|289666341|ref|ZP_06487922.1| arginine decarboxylase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 628

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 51/364 (14%), Positives = 104/364 (28%), Gaps = 54/364 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53
           P  +     L   L         A        G   +  +K     G+  TL  +     
Sbjct: 59  PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLASHHGDGF 118

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKF 107
           G  + S  E+M                YKD E   +            I+    S+LN  
Sbjct: 119 GLEAGSKPELMAVLALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELNLV 178

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158
            ++A+ L  + GL +   ++         +     + G   +  ++            ++
Sbjct: 179 LEEARALDVQPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADSL 238

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +  +    +  ++   + F        +I  + +GGG+    +    + +C
Sbjct: 239 KLLHFHMGSQISNVRDIANGMREATRYFVELSRLGVKISHVDVGGGLGIDYEGTRSRSYC 298

Query: 216 QR--------------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
                           L    E++     +I  E G A+  +   L   V ++ +  +  
Sbjct: 299 SINYGLHSYASNIVQPLASACEEHGLPPPRIVTECGRAMTAHHAVLIANVSEVEQAPEGR 358

Query: 259 VIVDSSVE----AHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313
           V    + E     H+ +          +            G   L+    G+       +
Sbjct: 359 VPDAHADEPAAIRHLREIHDELDVRPAVELFQEAQHFHAEG---LSAYALGQIDLTHRAR 415

Query: 314 IGDR 317
           I D 
Sbjct: 416 IDDL 419


>gi|29348803|ref|NP_812306.1| arginine decarboxylase [Bacteroides thetaiotaomicron VPI-5482]
 gi|253568852|ref|ZP_04846262.1| biosynthetic arginine decarboxylase [Bacteroides sp. 1_1_6]
 gi|48474840|sp|Q8A2B1|SPEA_BACTN RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|29340709|gb|AAO78500.1| putative arginine decarboxylase [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|251840871|gb|EES68952.1| biosynthetic arginine decarboxylase [Bacteroides sp. 1_1_6]
          Length = 630

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/316 (11%), Positives = 95/316 (30%), Gaps = 49/316 (15%)

Query: 2   IKTPYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM- 52
           + +P  L     L N ++          +  G K    ++  +K      + + +  +  
Sbjct: 56  VASPMLLRFPDILDNRIEKMSSCFKQAAEEYGYKAENFIIYPIKVNQMRPVVEEIISHGK 115

Query: 53  ---DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVS 102
               G  + S  E+          ++      YKD            +     ++   ++
Sbjct: 116 KFNLGLEAGSKPELHAVIAVNTDSDSLIVCNGYKDESYIELALLAQKMGKRIFLVVEKMN 175

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK----- 156
           +L      A++L+ +  + I   ++ S     + +    S+ G    + +E+        
Sbjct: 176 ELKLIAKMAKQLNVQPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDFMESKG 235

Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
               +  + FH   +    +              +       +E++ +GGG+        
Sbjct: 236 LKDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHSMGFNVEFVDIGGGLGVDYDGTR 295

Query: 211 VKDFCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDIS 252
             +    +    ++Y                     I  E G A+  + + L   VL+ +
Sbjct: 296 SSNSEGSVNYSIQEYVNDSISTLVDVSDKNGIPHPNIITESGRALTAHHSVLIFEVLETA 355

Query: 253 ENIKNLVIVDSSVEAH 268
              +     + + +AH
Sbjct: 356 TLPEWDDEEEIAPDAH 371


>gi|88809770|ref|ZP_01125276.1| arginine decarboxylase [Synechococcus sp. WH 7805]
 gi|88786154|gb|EAR17315.1| arginine decarboxylase [Synechococcus sp. WH 7805]
          Length = 636

 Score = 67.9 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/314 (10%), Positives = 85/314 (27%), Gaps = 48/314 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L + L+        A          + +  +KC     + + L        
Sbjct: 66  PLLIRFDDILEDRLERLHAAFDRAIAHYGYSGRYQGVFPVKCNQQRHVVERLVDSGQRWH 125

Query: 53  DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105
            G  + S  E+++        E       YKD            +      +     ++ 
Sbjct: 126 FGLEAGSKAELLIALSLLKDPEALLICNGYKDQRYLETAILARKLGRQPVVVIEQPDEVE 185

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIK 156
           +    +  L     + I   +S         +     + G    + +++         +K
Sbjct: 186 RIIQASDHLGAAPMIGIRARLSTRSTGRWGSSVGDRAKFGLSIPELLDTTAALRDAGLLK 245

Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK------ 207
            +  L FH   +          L+   + +G        + ++ +GGG+           
Sbjct: 246 ELRLLHFHIGSQINDIAVLKDALQEAGQIYGELHRLGAPMGFLDVGGGLGIDYDGSRSAT 305

Query: 208 ----DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
               +Y ++++   +    ++           +  E G A+ ++ + L   +L       
Sbjct: 306 AASTNYSLQNYANDVVATVKECCEPSGVPVPTLVSESGRALASHFSVLVFDILGTGAAPD 365

Query: 257 NLVIVDSSVEAHVP 270
                       + 
Sbjct: 366 ERPERMDDDPLILR 379


>gi|304383649|ref|ZP_07366108.1| arginine 2-monooxygenase [Prevotella marshii DSM 16973]
 gi|304335173|gb|EFM01444.1| arginine 2-monooxygenase [Prevotella marshii DSM 16973]
          Length = 630

 Score = 67.9 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/274 (11%), Positives = 79/274 (28%), Gaps = 31/274 (11%)

Query: 2   IKTPYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM- 52
           + +P  L     L N ++          K    +    ++  +K      + + +  +  
Sbjct: 56  VSSPVLLRFPDILDNRIEKTACCFQRAAKEYDYQGENFIIYPIKVNQMQPVVEEIISHGR 115

Query: 53  ---DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVS 102
               G  + S  E+          ++      YKD            +     I+   ++
Sbjct: 116 KFNLGLEAGSKPELHAVIAVQCQSDSLIICNGYKDQSYIELALLAQKMGKRIFIVIEKLN 175

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIES-------- 153
           +L+     A+KL+ K  + I   ++ S     + +    S+ G    + +++        
Sbjct: 176 ELDIIAQAAKKLNVKPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLQALDTMEKKG 235

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
               +  + FH   +    +              +       +E++  GGG+        
Sbjct: 236 LHDCLKLIHFHIGSQVTKIRHIQTALREASQFYIQLHKLGYDVEFVDCGGGLGVDYDGTR 295

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTL 244
             +    +    ++Y         EA   N    
Sbjct: 296 SPNSESSVNYSIQEYVNDCLYTFIEAANANGIKH 329


>gi|115379802|ref|ZP_01466872.1| arginine decarboxylase [Stigmatella aurantiaca DW4/3-1]
 gi|115363194|gb|EAU62359.1| arginine decarboxylase [Stigmatella aurantiaca DW4/3-1]
          Length = 621

 Score = 67.9 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/275 (13%), Positives = 80/275 (29%), Gaps = 32/275 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52
           P  +     L + +       K A          + +  +K      + +T+      Y 
Sbjct: 18  PLLIRFTDVLRHRVIHLNEAFKKAITESNYKGQYRGVYPIKVNQHRYVVETIVETGKNYG 77

Query: 53  DGTTSSSLYEVMLGHEKFGGET-HAYNVAYKDCEIDAVLSNC------DTIIFNTVSQLN 105
            G  + S  E++        E        YKD E                ++    S+L 
Sbjct: 78  YGLEAGSKPELLAVMALLDNEDALVICNGYKDEEYVETALFFSRLGRNVILVVEKPSELP 137

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIK 156
              + A+K      L +   +S       + +     + G    + +           + 
Sbjct: 138 LIAEVARKTGIAPRLGVRVKLSTRGAGKWEASGGDRSKFGLTSSELMNCISFMRETGLLP 197

Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKD 213
           +   L FH   +  +       L+ +   +         ++++ +GGG+          +
Sbjct: 198 HFELLHFHLGSQISNIRNVKNALREVGCFYVEVARQGAPLKYLDVGGGLGVDYDG-SQTN 256

Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248
           F   +   +E+Y+  +     EA      T  T V
Sbjct: 257 FTSSMNYTTEEYANDVVFGVMEACDRAGVTHPTLV 291


>gi|289805606|ref|ZP_06536235.1| diaminopimelate decarboxylase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 198

 Score = 67.9 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 54/165 (32%), Gaps = 12/165 (7%)

Query: 16  NNLDTALYIRKNA-GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGE 73
            N+             K   A K  +  G+   +        ++S YEV    E  F G+
Sbjct: 2   RNIHEIQQAFAAHKNTKTFFASKTCSVMGVLKAIRDAGICAEANSQYEVRKCLEIGFRGD 61

Query: 74  THAYNVAYKDCEIDAVLSNCD--TIIFNTVSQLNKFKDKAQKLHK--KIGLRINPSVSYS 129
              +N   K           D   I  +++ +L      ++KL K   + +R+ P+V  +
Sbjct: 62  QIVFNGVVKKPADLEYAIANDLYLINVDSLYELEHIDAISRKLKKVANVCVRVEPNVPSA 121

Query: 130 KF------ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE 168
                     A       +  E C+  +     ++ GL  H   +
Sbjct: 122 THAELVTAFHAKSGLDLEQAEETCRRILAMPYVHLRGLHMHVGDQ 166


>gi|291513701|emb|CBK62911.1| Diaminopimelate decarboxylase [Alistipes shahii WAL 8301]
          Length = 464

 Score = 67.9 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 53/400 (13%), Positives = 118/400 (29%), Gaps = 53/400 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKL--------LLALKCFAAWGMFDTLNQYMDG 54
            TP  +    K+   ++ A  +   A  K+            K      + +   +    
Sbjct: 42  GTPLKITYLPKISQQINRAKRMFNVAMAKVDYKGSYNYCYCTKSSHFSFVLEEAMKNDIH 101

Query: 55  TTSSSLYEVMLGHEKFGGETH-----AYNVAYKDCEIDAVLSNCDTIIFNTVSQ----LN 105
             +SS Y++ + +  + G             +K  +    ++      F+          
Sbjct: 102 LETSSAYDIHIINALYDGGIIDKDRYIICNGFKRPQYVENIAQLVNDGFSNTIPVLDNKE 161

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCK----DKIESEIKNVNGL 161
           + +       KK  + I  +           +R   R  +           S+   +  L
Sbjct: 162 ELELFEDSFTKKCKVGIRIACEEEPKFDFYTSRLGIRYNDIVDFYKAKLRNSKKFQLKML 221

Query: 162 MFHNNCENKSFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIH----------FTDKD 208
            F  N   K    +        N+  E      +++ +++GGG            +    
Sbjct: 222 HFFINTGIKDTAYYWNELSKCMNVYCELKAICPELDSLNVGGGFPIKNSLNFEYDYEYLT 281

Query: 209 YPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK--NLVIVDSSVE 266
             +    + + + +      I+ E G   V  +  +  ++++  +     N  ++DSS  
Sbjct: 282 EEIVAQIKNICQRNGVEEPNIFTEFGSFTVGESGAVLYSIVNQKQQNDRENWYMIDSSFI 341

Query: 267 AHVPDYL-LYQESATIYPNTGPYTAM---VCGRSCLAGDIFGEF-----HFEKPVKIG-- 315
             +PD   + Q    +  N          + G +C + D +         F   ++ G  
Sbjct: 342 TTLPDTWGINQRYIMLAVNNWDKEYQRVLLGGLTCDSEDFYNSECHTSAIFLPKLEAGNT 401

Query: 316 DRISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDGT 350
             I F     Y  +    F G     I  P   + + D +
Sbjct: 402 QYIGFFHTGAYQESLG-GFGGIQHCLIPAPKHVIIDRDKS 440


>gi|194367540|ref|YP_002030150.1| arginine decarboxylase [Stenotrophomonas maltophilia R551-3]
 gi|194350344|gb|ACF53467.1| arginine decarboxylase [Stenotrophomonas maltophilia R551-3]
          Length = 629

 Score = 67.9 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 51/364 (14%), Positives = 102/364 (28%), Gaps = 54/364 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53
           P  +     L   L         A        G   +  +K     G+  TL  +     
Sbjct: 60  PLLVRFPDILGQRLGKLQAAFGQAQQDWEYSGGYTAVYPIKVNQTRGVAGTLASHHGEGF 119

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKF 107
           G  + S  E+M                YKD E   +            I+    S+L   
Sbjct: 120 GLEAGSKPELMAVLALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELKLV 179

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158
            ++++ L  K GL +   ++         +     + G   +  ++             +
Sbjct: 180 LEESKALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQLLDLWKSLRDTEYADCL 239

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDK-------- 207
           N L FH   +  +    +  ++   + F        +I  + +GGG+    +        
Sbjct: 240 NLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKITHVDVGGGLGVDYEGTRSRSFC 299

Query: 208 --DYPVKDFCQRLKEFSEK-------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
             +Y +  +   + +              +I  E G A+  +   L   V ++ E  +  
Sbjct: 300 SINYGLHSYASNIVQPLANACEEFGLTPPRIVTECGRAMTAHHAVLIANVSEVEEAQEGR 359

Query: 259 VIVDSSVE----AHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313
           V      E     H+ +          +            G   LA    G+    +  +
Sbjct: 360 VPDQHDDEPAAIRHLREIHDELDVRPAVELFQEAQHFHAEG---LASYALGQIDLPQRAR 416

Query: 314 IGDR 317
           I D 
Sbjct: 417 IDDL 420


>gi|298208847|ref|YP_003717026.1| probable diaminopimelate decarboxylase [Croceibacter atlanticus
           HTCC2559]
 gi|83848774|gb|EAP86643.1| probable diaminopimelate decarboxylase [Croceibacter atlanticus
           HTCC2559]
          Length = 470

 Score = 67.9 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 49/408 (12%), Positives = 104/408 (25%), Gaps = 85/408 (20%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P  +       +N+     +      K  L  A K      + +       G  ++S 
Sbjct: 34  GSPLNIHSLPSFEDNITEYQEVLNVYNFKSQLFFARKANKFKNLIEAAVNSDIGVDTASY 93

Query: 61  YEVMLGH--EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E+      +    +  +         ++  L +   II +   +L + +   + L    
Sbjct: 94  EELKQCLDLQVESSKLISTAAIKNKELLELALKHNVVIIIDNKDELIEIEKLVKSLDCVA 153

Query: 119 GLRINPSVSYSKFILADPNRPFSRL---GEKCKDKIESEIKNVNGLMFHN---------- 165
            + I  S              F         C     +   N+ G  FH           
Sbjct: 154 QIGIRVSGFAHNNTKLFSRFGFDIEEVEPILCNYLKGNPSFNLKGFHFHLDGYSTAQRGN 213

Query: 166 -----------------------------NCENKSFLCFSAMLKNIEKEFGHFITQIEWI 196
                                            KS   +    + +++       ++ + 
Sbjct: 214 ALHQTISLFESYKSTFPNLSFIDIGGGILMNYLKSETEWQTFQEQLKEAILEKRPELTYK 273

Query: 197 SLGGGIHFT----------DKDYPVKDFCQR--------------LKEFSEKYSVQIYLE 232
           + G G                 +                      + +  E   +++ LE
Sbjct: 274 NSGLGFTIRNGVVEGKLATYPYFNTTTKANFLGEVLETLNSQNISVYKRLEDNEIELRLE 333

Query: 233 PGEAIVTNTTTLNTTVLD----------ISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
           PG +++         V            I   +    +  SS +  +  ++ Y       
Sbjct: 334 PGRSLLNQVGITMARVAHRKVDARGNHLIGLEMNMSQLKSSSADFLLDPFVSY---HNED 390

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEF--HFEKPVKIGDRISFEDVAGYNI 328
               P  A   G  CL  D+  +     ++   IGD + F + AGY +
Sbjct: 391 ETQQPIEAYFTGAYCLEQDVILKRKVVLKQLPSIGDVVIFVNTAGYMM 438


>gi|17230893|ref|NP_487441.1| arginine decarboxylase [Nostoc sp. PCC 7120]
 gi|48474916|sp|Q8YRP3|SPEA_ANASP RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|17132496|dbj|BAB75100.1| arginine decarboxylase [Nostoc sp. PCC 7120]
          Length = 679

 Score = 67.9 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/340 (12%), Positives = 99/340 (29%), Gaps = 51/340 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKN-------AGV-KLLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L + ++                GV + +  +KC     + + L ++     
Sbjct: 109 PLLIRFSDILEDRIERLNACFAKAIARYNYPGVYRGVFPVKCNQQRHLIEDLVRFGRPHQ 168

Query: 53  DGTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLN 105
            G  + S  E+M+         +      YKD E                I+   V +++
Sbjct: 169 FGLEAGSKPELMIALALLDTPGSLLICNGYKDREYVETAMLSQRLGQTPIIVLEQVEEVD 228

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------K 156
                + +L  K  L +   +S         +     + G    + I++           
Sbjct: 229 LVIAASHQLGIKPILGVRAKLSTQGMGRWGTSTGDRAKFGLTIPEIIQAVDKLRDADLLD 288

Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD------- 206
           ++  + FH   +                I  E       ++++ +GGG+           
Sbjct: 289 SLQLMHFHIGSQISAINVIKDAIQEASRIYVELASLGANMKYLDVGGGLGVDYDGSQTNF 348

Query: 207 ---KDYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
              K+Y ++++   +    +            +  E G AI ++ + L   VL  S+  +
Sbjct: 349 YASKNYNMQNYANDIVAELKDTCAEKQIPVPTLISESGRAIASHQSVLIFDVLSTSDVPR 408

Query: 257 NLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRS 296
           +        E+     + Y        N   Y       +
Sbjct: 409 DNPEPPKEGES---PVINYLWETYQSINKENYQEFYHDAT 445


>gi|310820757|ref|YP_003953115.1| arginine decarboxylase [Stigmatella aurantiaca DW4/3-1]
 gi|309393829|gb|ADO71288.1| Arginine decarboxylase [Stigmatella aurantiaca DW4/3-1]
          Length = 669

 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/275 (13%), Positives = 80/275 (29%), Gaps = 32/275 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52
           P  +     L + +       K A          + +  +K      + +T+      Y 
Sbjct: 66  PLLIRFTDVLRHRVIHLNEAFKKAITESNYKGQYRGVYPIKVNQHRYVVETIVETGKNYG 125

Query: 53  DGTTSSSLYEVMLGHEKFGGET-HAYNVAYKDCEIDAVLSNC------DTIIFNTVSQLN 105
            G  + S  E++        E        YKD E                ++    S+L 
Sbjct: 126 YGLEAGSKPELLAVMALLDNEDALVICNGYKDEEYVETALFFSRLGRNVILVVEKPSELP 185

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIK 156
              + A+K      L +   +S       + +     + G    + +           + 
Sbjct: 186 LIAEVARKTGIAPRLGVRVKLSTRGAGKWEASGGDRSKFGLTSSELMNCISFMRETGLLP 245

Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKD 213
           +   L FH   +  +       L+ +   +         ++++ +GGG+          +
Sbjct: 246 HFELLHFHLGSQISNIRNVKNALREVGCFYVEVARQGAPLKYLDVGGGLGVDYDG-SQTN 304

Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248
           F   +   +E+Y+  +     EA      T  T V
Sbjct: 305 FTSSMNYTTEEYANDVVFGVMEACDRAGVTHPTLV 339


>gi|291461062|ref|ZP_06600270.1| putative Orn/DAP/Arg decarboxylase [Fusobacterium periodonticum
           ATCC 33693]
 gi|291379154|gb|EFE86672.1| putative Orn/DAP/Arg decarboxylase [Fusobacterium periodonticum
           ATCC 33693]
          Length = 211

 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 61/197 (30%), Gaps = 34/197 (17%)

Query: 191 TQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY---------SVQIYLEPGEAIVTNT 241
            +++++++G G+        +     RLK   ++           + I++E G  +   +
Sbjct: 14  YKLKYVNMGSGMGIQYSKSDIPLDLDRLKSLVKENLSDFKKYNPDITIFIETGRYVTAKS 73

Query: 242 TTLNTTVLDISENI-KNLVIVDSSVEAHVPD-----YLLYQESATIYP------------ 283
                 VLD   +     +I+ +++   +          Y++   +              
Sbjct: 74  GFYVMKVLDKKVSYGTTYLILKNTLNGFIKPSIIKLVSKYEKENPVSWEPLFTSKDAFEI 133

Query: 284 ------NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNG 336
                         + G  C A D+  E      +  GD I   +   Y        F+ 
Sbjct: 134 LTFKEETDKKEKVTLVGNLCTATDVIAEDIVLPSMDCGDVIVINNAGSYAAVLSPMQFSS 193

Query: 337 INMPTIAVKNVDGTIKA 353
              P     +VD ++K 
Sbjct: 194 QEKPVEVFLSVDDSVKI 210


>gi|213021895|ref|ZP_03336342.1| hypothetical protein Salmonelentericaenterica_03877 [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 58

 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 313 KIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREF-SYNDYYN 364
            +GD ++F D   Y I  +  +N      + + + +G  + IR   SY D   
Sbjct: 2   HVGDIVAFLDAGAYTIESQTVYNNRPRTGVVMIDKNGETRLIRREDSYEDMVK 54


>gi|159902593|ref|YP_001549937.1| arginine decarboxylase [Prochlorococcus marinus str. MIT 9211]
 gi|159887769|gb|ABX07983.1| Orn/DAP/Arg decarboxylase family 2 [Prochlorococcus marinus str.
           MIT 9211]
          Length = 648

 Score = 67.9 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/298 (12%), Positives = 93/298 (31%), Gaps = 48/298 (16%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----N 49
           +K+P  L     L + +       KNA          K +  +KC     + + +     
Sbjct: 66  LKSPLLLRFDDILEDRIKKLHGAFKNAISHYEYEGEYKGVFPIKCNQQRHVVEEIVTCSR 125

Query: 50  QYMDGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCD------TIIFNTVS 102
           ++  G  + S  E+++        E       YKD                  ++   + 
Sbjct: 126 EWHFGLEAGSKAELLIALSLLDDPEALLICNGYKDKRYIETSILARQLGRKPIVVIEQLD 185

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIK----- 156
           ++++  +  +K+     + I   +S       ++     S+ G    +  ++  +     
Sbjct: 186 EVDRIINATKKIGSAPFIGIRAKLSSQSSGRWSNSIGEKSKFGLSIPEISQAVQQLKDAG 245

Query: 157 ---NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK--- 207
               +  L FH   +          L+   +I  E       +  + +GGG+        
Sbjct: 246 LLKELILLHFHIGSQINDIAVLKNALQEASHIYIELKRLGAPMGHLDVGGGLGIDYDGSR 305

Query: 208 -------DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDI 251
                  +Y ++++   +    ++           +  E G A+ ++ + L   VL  
Sbjct: 306 TATQASTNYSLQNYANDVVATIQECCKENQVQVPTLVSENGRAVSSHFSILVFNVLGT 363


>gi|289669332|ref|ZP_06490407.1| arginine decarboxylase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 628

 Score = 67.5 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 51/364 (14%), Positives = 104/364 (28%), Gaps = 54/364 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53
           P  +     L   L         A        G   +  +K     G+  TL  +     
Sbjct: 59  PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLASHHGDGF 118

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKF 107
           G  + S  E+M                YKD E   +            I+    S+LN  
Sbjct: 119 GLEAGSKPELMAVLALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELNLV 178

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158
            ++A+ L  + GL +   ++         +     + G   +  ++            ++
Sbjct: 179 LEEARALDVQPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADSL 238

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +  +    +  ++   + F        +I  + +GGG+    +    + +C
Sbjct: 239 KLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSYC 298

Query: 216 QR--------------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
                           L    E++     +I  E G A+  +   L   V ++ +  +  
Sbjct: 299 SINYGLHSYASNIVQPLASACEEHGLPPPRIVTECGRAMTAHHAVLIANVSEVEQAPEGR 358

Query: 259 VIVDSSVE----AHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313
           V    + E     H+ +          +            G   L+    G+       +
Sbjct: 359 VPDAHADEPAAIRHLREIHDELDVRPAVELFQEAQHFHAEG---LSAYALGQIDLTHRAR 415

Query: 314 IGDR 317
           I D 
Sbjct: 416 IDDL 419


>gi|294496536|ref|YP_003543029.1| Orn/DAP/Arg decarboxylase 2 [Methanohalophilus mahii DSM 5219]
 gi|292667535|gb|ADE37384.1| Orn/DAP/Arg decarboxylase 2 [Methanohalophilus mahii DSM 5219]
          Length = 347

 Score = 67.5 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/339 (11%), Positives = 105/339 (30%), Gaps = 22/339 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA-AWGMFDTLNQYMDGTTSSSL 60
           +  P +++ K+ ++        I       +  + K       + + +   +   +    
Sbjct: 3   VPEPKFILSKKVIMQQYGLVEDIADI----VSYSSKTNPKVTSVLEEMTNCL--FSVHME 56

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDA-VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E+    +     T      +   +            I +    L+      +  + ++ 
Sbjct: 57  NELKHIDDL--SRTVFLAQGWSSAQAKDLYDRGIRNFILDNEHDLDVLLTTLKDTNHRVN 114

Query: 120 LRIN---PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
           L +       S           P + +     + ++S      G+ FH   +N     + 
Sbjct: 115 LMLRLKLRENSIRTERYFVFGMPSATINRHIGELVDSPNIGKLGIHFHRKTQN--VSEWK 172

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP------VKDFCQRLKEFSEKYSVQIY 230
                 +      +  I+ +++GGG+     +        +       +++  +  + + 
Sbjct: 173 LQRDIEDVITPETLDAIDILNIGGGLPSVYANSNADVIGGIFKRITDFRKWLHERDISLM 232

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA 290
           +EPG  I      L T V+ + E+   +     + +       +         +      
Sbjct: 233 VEPGRYIAAPAGKLVTRVMAVYEDNVIVNASVYNSDMDAILVPVKLRVENEVSSHEGEAY 292

Query: 291 MVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNI 328
           ++ G +  + D+F    + +   +IGD I+F +   YN 
Sbjct: 293 VIKGCTPCSMDLFRYRVYLENRPQIGDPITFINAGAYNF 331


>gi|332884947|gb|EGK05202.1| biosynthetic arginine decarboxylase [Dysgonomonas mossii DSM 22836]
          Length = 630

 Score = 67.5 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/313 (11%), Positives = 87/313 (27%), Gaps = 49/313 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L N ++      K A           ++  +K      + + L  +     
Sbjct: 59  PVLIRFPDILDNRIEKISTCFKQAAEEYEYKGQNHIIYPIKVNQMRPVVEELISHGKKFN 118

Query: 53  DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLN 105
            G  + S  E+          ++      YKD            +     I+   ++++ 
Sbjct: 119 IGLEAGSKPELHAVIAINTDSDSLIICNGYKDESYIELALLAQKMGKHIFIVVEKLNEIP 178

Query: 106 KFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESE--------IK 156
                A++L     + I     S       +     S+ G    + +E+          +
Sbjct: 179 LIAKIAKRLKITPNIGIRIKLASSGSGKWEESGGDGSKFGLNSSELLEALAYLEKANMQE 238

Query: 157 NVNGLMFHNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213
           ++  + FH   +                   +      ++E++ +GGG+           
Sbjct: 239 SLRLIHFHIGSQITKIRRIKTALREAAQFYVQLHAMGFKVEFVDIGGGLGVDYDGTRSSY 298

Query: 214 FCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDISENI 255
               +    ++Y                     I  E G ++  + + L   VL+ +   
Sbjct: 299 NESSVNYSIQEYVNDSIATMVDAADKNGIPHPNIITESGRSLTAHHSILVFEVLETATLP 358

Query: 256 KNLVIVDSSVEAH 268
           +     D S + H
Sbjct: 359 EWDEDKDLSEDDH 371


>gi|226940370|ref|YP_002795444.1| arginine decarboxylase [Laribacter hongkongensis HLHK9]
 gi|226715297|gb|ACO74435.1| SpeA [Laribacter hongkongensis HLHK9]
          Length = 632

 Score = 67.5 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 42/298 (14%), Positives = 84/298 (28%), Gaps = 46/298 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL---NQYMD 53
           P  +     L       +     A        G  LL  +K      +   +        
Sbjct: 59  PLLVRFPDILQQRARRIIEGFDAAREAWEYPQGYTLLYPVKVNQQEAVIKAIIADTSLPI 118

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
           G  + S  E+M                YKD E   +      +       + K  +    
Sbjct: 119 GLEAGSKPELMAVLALARPGCKITCNGYKDREFIRLALIGQKLGHEIFIVIEKEAEVQYV 178

Query: 114 LHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158
           + +   L I P+        S+     AD      + G      +              V
Sbjct: 179 IDEARRLGIMPNVGLRVRLTSHVAGKWADSGGEKGKFGLSAAQLLSVSRQFIDAGMQDAV 238

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207
             L FH   +  +   + A  +   + FG        ++ + +GGG+             
Sbjct: 239 RLLHFHMGSQITNISDYRAGFREALRYFGELCRLGLPLDHLDVGGGLGVDYDGTHSRNDS 298

Query: 208 --DYPVKDFCQRL----KEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
             +Y + ++ + +    +EF +++      +  E G A+  +   L   V D+ +   
Sbjct: 299 SVNYTIGEYAETIVSMTREFCDEHGLTCPHVMSESGRALTAHHAVLIMNVTDVEKTND 356


>gi|218440951|ref|YP_002379280.1| arginine decarboxylase [Cyanothece sp. PCC 7424]
 gi|218173679|gb|ACK72412.1| arginine decarboxylase [Cyanothece sp. PCC 7424]
          Length = 679

 Score = 67.5 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/320 (12%), Positives = 96/320 (30%), Gaps = 55/320 (17%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVK-----LL---LALKCFAAWGMFDTLNQYM---- 52
           P  +     L + ++        A  +     +      +KC     + ++L +Y     
Sbjct: 95  PLLIRFSDILADRIERLNACFAKAIARYNYPNVYRGVYPIKCNQHRHIVESLVRYGKPYH 154

Query: 53  DGTTSSSLYEVMLGHEKFGGE--------THAYNVAYKDCEIDAVLSN------CDTIIF 98
            G  + S  E+M+                       YKD E                I+ 
Sbjct: 155 FGLEAGSKPELMIALATLEPVANPQNNQFPLLICNGYKDQEYIETALLATRLGQRPIIVI 214

Query: 99  NTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE----- 152
             + +++     +++   K  + +   +S         +     + G    + +      
Sbjct: 215 EQLEEVDLILKISRQFEIKPIVGVRAKLSSKGIGRWGNSAGDRAKFGLTIPEILTVVNRL 274

Query: 153 ---SEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTD 206
                +  +  L FH   +  S       ++   + +G        ++++ +GGG+    
Sbjct: 275 EACQMLDCLQLLHFHIGSQISSISVIKDAIREAAQIYGELVKLGAHMQYLDVGGGLGVDY 334

Query: 207 ----------KDYPVKDFCQRLKEFSEKYSVQIYL-------EPGEAIVTNTTTLNTTVL 249
                     K+Y ++++   +    ++   +  +       E G AI  + + L   VL
Sbjct: 335 DGSKTNFYASKNYNMQNYANDIVAEVKEACEERNITAPVLVSESGRAIAAHHSVLIFDVL 394

Query: 250 DISENIKNLVIVDSSVEAHV 269
             +E  +   I     E  +
Sbjct: 395 GTNEVPRTPPIAVEEKEHLI 414


>gi|75909629|ref|YP_323925.1| arginine decarboxylase [Anabaena variabilis ATCC 29413]
 gi|75703354|gb|ABA23030.1| arginine decarboxylase [Anabaena variabilis ATCC 29413]
          Length = 671

 Score = 67.5 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 44/340 (12%), Positives = 99/340 (29%), Gaps = 51/340 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKN-------AGV-KLLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L + ++                GV + +  +KC     + + L ++     
Sbjct: 101 PLLIRFSDILEDRIERLNACFAKAIARYNYPGVYRGVFPVKCNQQRHLIEDLVRFGKPHQ 160

Query: 53  DGTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLN 105
            G  + S  E+M+         +      YKD E                I+   V +++
Sbjct: 161 FGLEAGSKPELMIALALLDTPGSLLVCNGYKDREYVETAMLSQRLGQTPIIVLEQVEEVD 220

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------K 156
                + +L  K  L +   +S         +     + G    + I++           
Sbjct: 221 LVIAASHQLGIKPILGVRAKLSTQGMGRWGTSTGDRAKFGLTIPEIIQAVDKLRDADLLD 280

Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD------- 206
           ++  + FH   +                I  E       ++++ +GGG+           
Sbjct: 281 SLQLMHFHIGSQISAINVIKDAIQEASRIYVELASLGANMKYLDVGGGLGVDYDGSQTNF 340

Query: 207 ---KDYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
              K+Y ++++   +    +            +  E G AI ++ + L   VL  S+  +
Sbjct: 341 YASKNYNMQNYANDIVAELKDTCAEKQIPVPTLISESGRAIASHQSVLIFDVLSTSDVPR 400

Query: 257 NLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRS 296
           +        E+     + Y        N   Y       +
Sbjct: 401 DNPEPPKEGES---PVINYLWETYQSINKENYQEFYHDAT 437


>gi|319900413|ref|YP_004160141.1| arginine decarboxylase [Bacteroides helcogenes P 36-108]
 gi|319415444|gb|ADV42555.1| arginine decarboxylase [Bacteroides helcogenes P 36-108]
          Length = 630

 Score = 67.5 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/313 (12%), Positives = 94/313 (30%), Gaps = 49/313 (15%)

Query: 5   PYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L N ++          +  G K    ++  +K      + + +  +     
Sbjct: 59  PMLVRFPDILDNRIEKVSCCFKQAAEEYGYKGENFIIYPIKVNQMRPVVEEMINHGKKFN 118

Query: 53  DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLN 105
            G  + S  E+          ++      YKD            +     ++   +++LN
Sbjct: 119 LGLEAGSKPELHAVIGVNTDPDSLVVCNGYKDESFIELALLAQKMGKRIFLVVEKLNELN 178

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK-------- 156
                A++L  +  + I   ++ S     + +    S+ G    + +E+           
Sbjct: 179 LIAKMAKQLKVRPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDFLEKKEMKD 238

Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKD 213
            +  + FH   +          L+   + F    +    IE++  GGG+          +
Sbjct: 239 CLKLIHFHIGSQITKIRRIKNALREASQFFVQLHNLGFNIEFVDTGGGMGVDYDGTRSSN 298

Query: 214 FCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDISENI 255
               +    ++Y                     I  E G ++  + + L   VL+ +   
Sbjct: 299 SESSVNYSIQEYVNDVVSTFVDAADKHGFSHPNIITETGRSLTAHHSVLVFEVLETASLP 358

Query: 256 KNLVIVDSSVEAH 268
           +     +   EAH
Sbjct: 359 QMDDAWEPGEEAH 371


>gi|218246486|ref|YP_002371857.1| arginine decarboxylase [Cyanothece sp. PCC 8801]
 gi|218166964|gb|ACK65701.1| arginine decarboxylase [Cyanothece sp. PCC 8801]
          Length = 681

 Score = 67.1 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 42/341 (12%), Positives = 95/341 (27%), Gaps = 55/341 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52
           P  +     L + L         A          + +  +KC     + +T+      Y 
Sbjct: 77  PLLIRFSDILADRLARLNASFDRAIARYNYPNKYQGVYPIKCNQHRHIVETIVNYSKSYQ 136

Query: 53  DGTTSSSLYEVMLGHEKFGG-------ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLN 105
            G  + S  E+M+                      YKD            + +  +  + 
Sbjct: 137 FGLEAGSKPELMIALATLDPSLIAPNYAPIIICNGYKDPAYIKTAILATQLGYKPIIVIE 196

Query: 106 KFKDKAQKLHKKIGLRINPSVSYS-------KFILADPNRPFSRLGEKCKDKI------- 151
           + ++    L     L I PS+               +     ++ G    + +       
Sbjct: 197 QLEELFLTLEISKQLGIEPSLGVRAKLSTKGSGRWGNSTGDRAKFGLTIPEILTVVEYLK 256

Query: 152 -ESEIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD- 206
            E  +  +  L FH   +                I  +       ++++ +GGG+     
Sbjct: 257 SEENLHYLQLLHFHIGSQIASISVIKDAIREASQIYIQLAKVNPNMQYLDVGGGLGVDYD 316

Query: 207 ---------KDYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLD 250
                    K+Y ++++   +    ++           +  E G AI  + + L   VL+
Sbjct: 317 GSKTNFYASKNYNMQNYANDIVAEVKESCEAANIEAPILISESGRAIAAHHSVLIFDVLN 376

Query: 251 ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAM 291
            ++         +  +  +    L+Q   +I       T  
Sbjct: 377 TNDVCTTPPEFIAENDNLII-RNLWQTYESIDVKNYQETYH 416


>gi|87119253|ref|ZP_01075151.1| biosynthetic arginine decarboxylase [Marinomonas sp. MED121]
 gi|86165644|gb|EAQ66911.1| biosynthetic arginine decarboxylase [Marinomonas sp. MED121]
          Length = 631

 Score = 67.1 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/273 (11%), Positives = 80/273 (29%), Gaps = 42/273 (15%)

Query: 18  LDTALYIRKNAGVKLLLALKCFAAWGMFDTL------NQYMDGTTSSSLYEVMLGHE-KF 70
            +   + + +    ++  +K      + + +      N    G  + S  E+M       
Sbjct: 79  YEAIAFYQYHGDYSIVYPIKVNQQRRVVEEITGFQKENPLSVGLEAGSKPELMAVLAMHQ 138

Query: 71  GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSV---- 126
             +       YKD E   +    + +       + K  + A  L +   L + P +    
Sbjct: 139 SPDGVIVCNGYKDKEFIHLALMAEKMGHKVFIVVEKMHELAWILEEAERLSVQPRIGIRI 198

Query: 127 ---SYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKSFLCF 175
              S       +     S+ G      + +            +  + FH   +       
Sbjct: 199 KLASTCTTHWDNSGGDKSKFGLTTSQLMRAIDSLRDANMLHCLELIHFHLGSQITRIRDI 258

Query: 176 SAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK----------DYPVKDFCQ----RL 218
              LK   + +        +++W+ +GGG+    +          +Y + ++        
Sbjct: 259 QNSLKECARFYAELHSLGAKVKWVDVGGGLGVDYEGTRCQSAYSANYSISEYANNVVFAF 318

Query: 219 KEFSEKY---SVQIYLEPGEAIVTNTTTLNTTV 248
               +++      +  E G A+  +   + T V
Sbjct: 319 HNVCQEHDLPHPNLISESGRAVTAHHAMMITNV 351


>gi|257059529|ref|YP_003137417.1| arginine decarboxylase [Cyanothece sp. PCC 8802]
 gi|256589695|gb|ACV00582.1| arginine decarboxylase [Cyanothece sp. PCC 8802]
          Length = 681

 Score = 67.1 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/319 (12%), Positives = 88/319 (27%), Gaps = 54/319 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52
           P  +     L + L         A          + +  +KC     + +T+      Y 
Sbjct: 77  PLLIRFSDILADRLARLNASFDRAIARYNYPNKYQGVYPIKCNQHRHIVETIVNYSKSYQ 136

Query: 53  DGTTSSSLYEVMLGHEKFGG-------ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLN 105
            G  + S  E+M+                      YKD            + +  +  + 
Sbjct: 137 FGLEAGSKPELMIALATLDPSLIAPNYAPIIICNGYKDPAYIKTAILATQLGYKPIIVIE 196

Query: 106 KFKDKAQKLHKKIGLRINPSVSYS-------KFILADPNRPFSRLGEKCKDKI------- 151
           + ++    L     L I PS+               +     ++ G    + +       
Sbjct: 197 QLEELFLTLEISKQLGIEPSLGVRAKLSTKGSGRWGNSTGDRAKFGLTIPEILTVVEYLK 256

Query: 152 -ESEIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD- 206
            E  +  +  L FH   +                I  +       ++++ +GGG+     
Sbjct: 257 SEENLHYLQLLHFHIGSQIASISVIKDAIREASQIYIQLAKVNPNMQYLDVGGGLGVDYD 316

Query: 207 ---------KDYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLD 250
                    K+Y ++++   +    ++           +  E G AI  + + L   VL+
Sbjct: 317 GSKTNFYASKNYNMQNYANDIVAEVKESCEAANIEAPILISESGRAIAAHHSVLIFDVLN 376

Query: 251 ISENIKNLVIVDSSVEAHV 269
            +        +    E  +
Sbjct: 377 TNNVCTTPPQLVEEKENLI 395


>gi|117924031|ref|YP_864648.1| arginine decarboxylase [Magnetococcus sp. MC-1]
 gi|117607787|gb|ABK43242.1| arginine decarboxylase [Magnetococcus sp. MC-1]
          Length = 644

 Score = 67.1 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 65/232 (28%), Gaps = 28/232 (12%)

Query: 14  LLNNLDTALYIRKNAGVKLLLA--------LKCFAAWGMFDTLNQYM--DGTTSSSLYEV 63
           L + +         +  +L  A        +K      +   +       G    S  E+
Sbjct: 90  LQDRITRLNRAFTESRSRLNYAGHYQGVYPVKVNQDRHVVSEVVASGTPMGLEVGSKPEL 149

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +L               YKD +   +      + F     +++ ++ A  +     L ++
Sbjct: 150 VLAMAYMDRTPLIICNGYKDRDYIELALRATGLGFPIFVVVDRLEELAPIIDLAKSLNVS 209

Query: 124 PSVS-------YSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCE 168
           P++              ++    FS+ G    + + +  +        ++  L  H   +
Sbjct: 210 PNLGLRARLLTEGVGKWSESAGGFSKFGLTAGEILLAVNQLEREGLKESLKLLHMHQGSQ 269

Query: 169 NKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR 217
                      +       E       IE++ +GGG+    +       C  
Sbjct: 270 ISLLDVVRQSAQEIVRFYLELRKMGCPIEYVDVGGGLGVDYEGLSSSAPCSV 321


>gi|153004826|ref|YP_001379151.1| arginine decarboxylase [Anaeromyxobacter sp. Fw109-5]
 gi|152028399|gb|ABS26167.1| arginine decarboxylase [Anaeromyxobacter sp. Fw109-5]
          Length = 660

 Score = 67.1 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 78/303 (25%), Gaps = 38/303 (12%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKL--------LLALKCFAAWGMFDTLNQYMD--- 53
           P  +  +  L   +         A  ++        +  +K      + + +        
Sbjct: 75  PCVVRFQDVLRARVKQINEAFAKAVAEMGYGARYLGVYPIKVNQMREVVEEILDAGAPYN 134

Query: 54  -GTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA 111
            G  + S  E+++        E       YKD E   +      +    +  + K  +  
Sbjct: 135 YGLEAGSKGELLVVLGMNTNPEALTICNGYKDEEYLRLALLGRKLGRKVIVVIEKLSELP 194

Query: 112 QKLHKKIGLRINPSVS-------YSKFILADPNRPFSRLGEKCKDKIES--------EIK 156
           Q L     + + P +                 +  F++ G    + I +        +  
Sbjct: 195 QLLKLGEEMGVEPMIGLRSKLTTRGTGKWEGSSGDFAKFGLTVPELIHAVRILKDAKKEH 254

Query: 157 NVNGLMFHNNC---ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213
               L FH      E +           +  +       IE+  +GGG+           
Sbjct: 255 CAKLLHFHVGSQLTEIRVVKDAVNEGARVYAKLRKMGLPIEYFDVGGGMGVDYVGVQTNG 314

Query: 214 FCQ------RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK-NLVIVDSSVE 266
             Q       +    ++Y   +        V         V +    I  +   +  +V 
Sbjct: 315 NAQPGTIASTVNYTLDEYVGDVVYNVQRVCVNEGVPEPNLVTESGRAITAHHSCIIMNVF 374

Query: 267 AHV 269
            H+
Sbjct: 375 GHI 377


>gi|288925355|ref|ZP_06419289.1| arginine 2-monooxygenase [Prevotella buccae D17]
 gi|315606757|ref|ZP_07881767.1| arginine 2-monooxygenase [Prevotella buccae ATCC 33574]
 gi|288337826|gb|EFC76178.1| arginine 2-monooxygenase [Prevotella buccae D17]
 gi|315251612|gb|EFU31591.1| arginine 2-monooxygenase [Prevotella buccae ATCC 33574]
          Length = 630

 Score = 67.1 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/256 (10%), Positives = 73/256 (28%), Gaps = 28/256 (10%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
           ++D  ++          ++    K    ++  +K      + + +  +      G  + S
Sbjct: 67  ILD-NRIEKTASCFQKAKEEYNYKGENFIIYPIKVNQMQPVVEEIISHGRKFNLGLEAGS 125

Query: 60  LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112
             E+          ++      YKD            +     I+   +++L      A+
Sbjct: 126 KPELHAVIAVQCQSDSLIICNGYKDQSYIELALLAQKMGKRIFIVVEKLNELEIIAKAAK 185

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK--------NVNGLMF 163
           KL+ K  L I   ++ S     + +    S+ G    + +E+           ++  + F
Sbjct: 186 KLNVKPNLGIRIKLASSGSGKWEDSGGDASKFGLNSSELLEALHMLDEKGLHDSLRLIHF 245

Query: 164 HNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
           H   +                           ++++  GGG+               +  
Sbjct: 246 HIGSQITKIRRIQTALREAAQFYINLHKMGYNVDFVDCGGGLGVDYDGTRSSSSESSVNY 305

Query: 221 FSEKYSVQIYLEPGEA 236
             ++Y         +A
Sbjct: 306 SIQEYVNDCIYTFVDA 321


>gi|297622332|ref|YP_003703766.1| arginine decarboxylase [Truepera radiovictrix DSM 17093]
 gi|297163512|gb|ADI13223.1| arginine decarboxylase [Truepera radiovictrix DSM 17093]
          Length = 637

 Score = 67.1 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/234 (11%), Positives = 65/234 (27%), Gaps = 27/234 (11%)

Query: 11  KQKLLNNLDTALYIRKNAGVKLLL----ALKCFAAWGMFDTLNQYMD----GTTSSSLYE 62
           + +L          R+  G +        +K      + +TL +       G  + S  E
Sbjct: 74  ENRLERLNRAFAEAREKFGYESHYQGVFPIKVNQRRVVVETLAEAGARFRTGVEAGSKAE 133

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ------KLH 115
           + L   +    E       +KD +   +      +  N V  L KF + A+      ++ 
Sbjct: 134 LALCLVQDIHPEALLCCNGFKDDDFIRLALWGRRLGKNVVITLEKFTELARVLRISEEMG 193

Query: 116 KKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNVNGLMFHNN 166
            +  L +   +        + +     + G    + +              +  +  H  
Sbjct: 194 IRPALGLRYKLHAQGSGQWEDSGGDRAKFGLSTSEMLSVTQSLRERGMLDTLVMVHCHVG 253

Query: 167 CE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR 217
            +    +              E      +I ++++GGG+           +   
Sbjct: 254 SQVTDIRKIRTAVREAAQTYVELRELGVEIRYLNVGGGLAVDYDGSKTSFYASA 307


>gi|325914460|ref|ZP_08176804.1| arginine decarboxylase [Xanthomonas vesicatoria ATCC 35937]
 gi|325539230|gb|EGD10882.1| arginine decarboxylase [Xanthomonas vesicatoria ATCC 35937]
          Length = 628

 Score = 67.1 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 52/364 (14%), Positives = 103/364 (28%), Gaps = 54/364 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53
           P  +     L   L         A        G   +  +K     G+  TL  +     
Sbjct: 59  PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLASHHGDGF 118

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKF 107
           G  + S  E+M                YKD E   +            I+    S+L   
Sbjct: 119 GLEAGSKPELMAVLALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELKLV 178

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158
            ++A+ L  K GL +   ++         +     + G   +  ++            ++
Sbjct: 179 LEEARALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADSL 238

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC 215
           N L FH   +  +    +  ++   + F        +I  + +GGG+    +    + +C
Sbjct: 239 NLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSYC 298

Query: 216 QR--------------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
                           L    E++     +I  E G A+  +   L   V ++ +  +  
Sbjct: 299 SINYGLHSYASNIVQPLASACEEHGLTPPRIVTECGRAMTAHHAVLIANVSEVEQAPEGR 358

Query: 259 VIVDSSVE----AHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313
           V      E     H+ +          +            G   L+    G+       +
Sbjct: 359 VPDAHDDEPAAIRHLREIHDELDVRPAVELFQEAQHFHAEG---LSAYALGQIDLTHRAR 415

Query: 314 IGDR 317
           I D 
Sbjct: 416 IDDL 419


>gi|224536691|ref|ZP_03677230.1| hypothetical protein BACCELL_01567 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224521782|gb|EEF90887.1| hypothetical protein BACCELL_01567 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 630

 Score = 67.1 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/256 (10%), Positives = 75/256 (29%), Gaps = 28/256 (10%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
           ++D  ++           +  G K    ++  +K      + + +  +      G  + S
Sbjct: 67  ILD-NRIEKTSSCFRQAAEEYGYKAQNFIIYPIKVNQMRPVVEEIISHGKKFNLGLEAGS 125

Query: 60  LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112
             E+          ++      YKD            +     ++   +++L      A+
Sbjct: 126 KPELHAVIAINSDSDSLIICNGYKDESYIELALLAQKMGKRIFLVVEKMNELKLIAKMAK 185

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK--------NVNGLMF 163
           +L+    + I   ++ S     + +    S+ G    + +E+            +  + F
Sbjct: 186 QLNVMPNIGIRIKLASSGSGKWEDSGGDASKFGLSSSELLEALDFLDSKGLKDCLKLIHF 245

Query: 164 HNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
           H   +    +              +      ++E++ +GGG+               +  
Sbjct: 246 HIGSQVTKIRRIKTALREASQFYVQLHAMGFKVEFVDIGGGLGVDYDGTRSSSSESSVNY 305

Query: 221 FSEKYSVQIYLEPGEA 236
             ++Y         +A
Sbjct: 306 SIQEYVNDSISTLVDA 321


>gi|6502941|gb|AAF14518.1|AF139900_1 ornithine decarboxylase [Plasmodium falciparum]
          Length = 948

 Score = 67.1 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 58/219 (26%), Gaps = 8/219 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I T    I+ QK+L              V    ++K      +   L         +S+ 
Sbjct: 363 IDTSVVCINLQKILAQYVRFKKNL--PHVTPFYSVKSNNDEVVIKFLYGLNCNFDCASIG 420

Query: 62  EVMLGHEKFGG---ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+    +       +   +    K           +  +    +     K         +
Sbjct: 421 EISKVIKLLPNLSRDRIIFANTIKSINSLIYARKENINLCTFDNLDELKKIYKYHPKCSL 480

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
            LRIN      K  ++          E+     +    N+ G+ FH     K+   F   
Sbjct: 481 ILRINVDFKNYKSYMSSKYGANEYEWEEMLLYAKKHNLNIVGVSFHVGSNTKNLFDFCLA 540

Query: 179 LKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDF 214
           +K     F            I+LGGG     +    K  
Sbjct: 541 IKLCRDVFDMSSNMGFNFYIINLGGGYPEELEYDNAKKH 579



 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 30/103 (29%)

Query: 243 TLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDI 302
             +  V D      + +I D      +            + N   Y A V G+SC   D+
Sbjct: 830 YFSYYVSDSIYGCFSGIIFDEYNRCPIYVIKNKNNPNQNFMNFNLYLANVFGQSCDGLDM 889

Query: 303 FGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
                +     I D + +E    Y     + FNG         
Sbjct: 890 INSITYLPECYINDWLLYEYAGAYTFVSSSNFNGFKKCKKVYI 932


>gi|282859014|ref|ZP_06268150.1| arginine 2-monooxygenase [Prevotella bivia JCVIHMP010]
 gi|282588182|gb|EFB93351.1| arginine 2-monooxygenase [Prevotella bivia JCVIHMP010]
          Length = 630

 Score = 67.1 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/329 (11%), Positives = 89/329 (27%), Gaps = 46/329 (13%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
           ++D  ++          +K    K    ++  +K      + + +  +      G  + S
Sbjct: 67  ILD-NRIEKTASCFDKAKKEYDFKAENFIIYPIKVNQMQPVVEEIITHGRKFNLGLEAGS 125

Query: 60  LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112
             E+          ++      YKD            +     I+   ++++      A+
Sbjct: 126 KPELHAVIAVQCQSDSLIICNGYKDQSYIELALLAQKMGKRIFIVVEKLNEIEVIARAAK 185

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIES--------EIKNVNGLMF 163
           KL+ K  L I   ++ S       +    S+ G    + +++           ++  + F
Sbjct: 186 KLNVKPNLGIRIKLASSGSGKWAESGGDASKFGLTSSELLQALELLDSKGLHDSLKLIHF 245

Query: 164 HNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
           H   +          L                +E++  GGG+               +  
Sbjct: 246 HIGSQITKIRRIQVALNEAGQYYVNLRKMGYNVEFVDCGGGLGVDYDGTRSSSSESSVNY 305

Query: 221 FSEKYSVQI------------------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD 262
             ++Y                        E G ++  + + L   VL+ +   +     +
Sbjct: 306 SIQEYVNDCVYTFVDAANKNDIPHPNIITESGRSLAAHHSVLVIDVLETASLPEMPEEFE 365

Query: 263 SSVEAHVPDYLLYQESATIYPNTGPYTAM 291
           +    H     LY     I          
Sbjct: 366 AKETDHQLVRDLYHIWDNIDKRNMLEDWH 394


>gi|113953852|ref|YP_731930.1| arginine decarboxylase [Synechococcus sp. CC9311]
 gi|113881203|gb|ABI46161.1| arginine decarboxylase [Synechococcus sp. CC9311]
          Length = 644

 Score = 67.1 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/268 (11%), Positives = 74/268 (27%), Gaps = 32/268 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52
           P  +     L + L+      + A          + +  +KC     + + L     ++ 
Sbjct: 65  PLLIRFDDILEDRLERLHAAFERAVTRYDYEGRYQGVFPVKCNQQRHVVEELVTCGRRWH 124

Query: 53  DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105
            G  + S  E+++        E       YKD            +      +     ++ 
Sbjct: 125 FGLEAGSKAELLIALSLMDDPEALLICNGYKDQRYIETAILARRLGRRPVVVIEQPDEVQ 184

Query: 106 KFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKIES--------EIK 156
           +  D +Q+L     + I   +S              ++ G    + I +         + 
Sbjct: 185 RIIDASQELGAAPLIGIRARLSSRSTGRWGSSVGDKAKFGLPAPEIIGAVEALRDANLLS 244

Query: 157 NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213
            +  L FH   +    +     L+    +  E       + ++ +GGG+           
Sbjct: 245 ELRLLHFHVGSQINDIVVVKDALQEASRLYVELHALGAPMGYLDVGGGLGIDYDG-SRTA 303

Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
                    + Y+  +     E    N 
Sbjct: 304 TAASTNYSLQNYANDVVATVKEGCEPNN 331


>gi|189465062|ref|ZP_03013847.1| hypothetical protein BACINT_01406 [Bacteroides intestinalis DSM
           17393]
 gi|189437336|gb|EDV06321.1| hypothetical protein BACINT_01406 [Bacteroides intestinalis DSM
           17393]
          Length = 630

 Score = 67.1 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/256 (10%), Positives = 75/256 (29%), Gaps = 28/256 (10%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
           ++D  ++           +  G K    ++  +K      + + +  +      G  + S
Sbjct: 67  ILD-NRIEKTSSCFRQAAEEYGYKAQNFIIYPIKVNQMRPVVEEIISHGKKFNLGLEAGS 125

Query: 60  LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112
             E+          ++      YKD            +     ++   +++L      A+
Sbjct: 126 KPELHAVIAINSDSDSLIICNGYKDESYIELALLAQKMGKRIFLVVEKMNELKLIAKMAK 185

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK--------NVNGLMF 163
           +L+    + I   ++ S     + +    S+ G    + +E+            +  + F
Sbjct: 186 QLNVMPNIGIRIKLASSGSGKWEDSGGDASKFGLSSSELLEALDFLESKGLKDCLKLIHF 245

Query: 164 HNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
           H   +    +              +      ++E++ +GGG+               +  
Sbjct: 246 HIGSQVTKIRRIKTALREASQFYVQLHAMGFKVEFVDIGGGLGVDYDGTRSSSSESSVNY 305

Query: 221 FSEKYSVQIYLEPGEA 236
             ++Y         +A
Sbjct: 306 SIQEYVNDSISTLVDA 321


>gi|224025224|ref|ZP_03643590.1| hypothetical protein BACCOPRO_01958 [Bacteroides coprophilus DSM
           18228]
 gi|224018460|gb|EEF76458.1| hypothetical protein BACCOPRO_01958 [Bacteroides coprophilus DSM
           18228]
          Length = 630

 Score = 67.1 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 34/313 (10%), Positives = 87/313 (27%), Gaps = 49/313 (15%)

Query: 5   PYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L N ++             G K    ++  +K      + + +  +     
Sbjct: 59  PMLVRFPDILDNRIEKISNCFQQAADEYGYKAQNFIIYPIKVNQMRPVVEEIISHGKKFN 118

Query: 53  DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLN 105
            G  + S  E+          ++      YKD            +     ++   +++L 
Sbjct: 119 LGLEAGSKPELHAVIAINTDSDSLIVCNGYKDESYIELALLAQKMGKRIFLVVEKLNELR 178

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK-------- 156
                A++L+ +  + I   ++ S     + +    S+ G    + +E+           
Sbjct: 179 LISRIAKQLNVRPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDFIEKKDMKD 238

Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213
            +  + FH   +    +              +       +E++ +GGG+           
Sbjct: 239 CLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHQLGFPVEFVDIGGGLGVDYDGTRSSY 298

Query: 214 FCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDISENI 255
               +    ++Y                     I  E G ++  + + L   VL+ +   
Sbjct: 299 SESSVNYSIQEYVNDSISILVDASNKNGIPHPNIITESGRSLTAHHSVLIFEVLETASLP 358

Query: 256 KNLVIVDSSVEAH 268
                 +     H
Sbjct: 359 SMDEEFEVGPNDH 371


>gi|218263072|ref|ZP_03477317.1| hypothetical protein PRABACTJOHN_02998 [Parabacteroides johnsonii
           DSM 18315]
 gi|218223005|gb|EEC95655.1| hypothetical protein PRABACTJOHN_02998 [Parabacteroides johnsonii
           DSM 18315]
          Length = 630

 Score = 67.1 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 33/306 (10%), Positives = 82/306 (26%), Gaps = 46/306 (15%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
           ++D  ++    +         G K    ++  +K      + + +  +      G  + S
Sbjct: 67  ILD-NRIEKIANCFKQASDEYGYKAQNFIIYPIKVNQMRPVVEEIIGHGKKFNLGLEAGS 125

Query: 60  LYEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
             E+          ++      YKD     +      +       + K  +         
Sbjct: 126 KPELHAVIAVNTDSDSLIICNGYKDESYIELALLAQKMGKRIFLVVEKINELTLIAKMAK 185

Query: 119 GLRINPSV-------SYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMF 163
            L + P++       S       +     S+ G    + +E+            +  + F
Sbjct: 186 QLNVRPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDFLEKKDLTDCLKLIHF 245

Query: 164 HNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
           H   +    +              +       IE++ +GGG+          +    +  
Sbjct: 246 HIGSQVTKIRRIKTALREASQFYVQLHAMGFNIEFVDIGGGLGVDYDGTRSSNSESSVNY 305

Query: 221 FSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD 262
             ++Y                     I  E G ++  + + L   VL+ +   +     +
Sbjct: 306 SIQEYVNDSISTMVDVSDKNGIPHPNIITESGRSLTAHHSVLIFEVLETATLPEMDEDFE 365

Query: 263 SSVEAH 268
            S   H
Sbjct: 366 VSESDH 371


>gi|242238002|ref|YP_002986183.1| arginine decarboxylase [Dickeya dadantii Ech703]
 gi|242130059|gb|ACS84361.1| arginine decarboxylase [Dickeya dadantii Ech703]
          Length = 657

 Score = 66.7 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 34/265 (12%), Positives = 75/265 (28%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     + A        G  L+  +K      + + L       G
Sbjct: 86  PALFCFPQILQHRLRSINAAFRRARESFGYEGGYFLVYPIKVNQHRRVIEALVNSGEPLG 145

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   ++++   
Sbjct: 146 LEAGSKAELMAVLAHAGMTRTVIVCNGYKDREYIRLALIGEKIGHKVYLVIEKMTEIKLV 205

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            ++A++L+    L +   ++         +     + G      +             ++
Sbjct: 206 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAAAQVLHLVELLRQANRLDSL 265

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 266 QLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 325

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  +    GEA    
Sbjct: 326 S-VNYGLNEYANNVIWGIGEACNEY 349


>gi|22297071|gb|AAM94459.1| ornithine decarboxylase [Daucus carota]
          Length = 251

 Score = 66.7 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/236 (13%), Positives = 64/236 (27%), Gaps = 10/236 (4%)

Query: 35  ALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEID--AVLS 91
           A+KC         L         +S  E+              +    K       A   
Sbjct: 2   AVKCNPEPSFLSMLAAMGSNFDCASRAEIEYVLSLGISPGRIVFANPCKPESDIIFAEKV 61

Query: 92  NCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI 151
             +   +++  ++ K K    K    + ++     +    +            E      
Sbjct: 62  GVNLTTYDSEDEVYKIKKHHPKCELLLRIKPMNDGNARCPMGPKY-GALPEEVEPLLRIA 120

Query: 152 ESEIKNVNGLMFHNNCE----NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGI--HFT 205
           ++    V+G+ FH        N      +A  +  E      ++++  + +GGG      
Sbjct: 121 QASRLTVSGVSFHIGSGDADSNAYLGAIAAAKQVFETADKFGMSKMNVLDIGGGFTSGHQ 180

Query: 206 DKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV 261
                        + FS +  + I  EPG        TL TT++            
Sbjct: 181 FTTAATAVRSALQQHFSNEPELTIIAEPGRFFAETAFTLATTIIGKRVRGDLREYW 236


>gi|154495143|ref|ZP_02034148.1| hypothetical protein PARMER_04190 [Parabacteroides merdae ATCC
           43184]
 gi|154085693|gb|EDN84738.1| hypothetical protein PARMER_04190 [Parabacteroides merdae ATCC
           43184]
          Length = 630

 Score = 66.7 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 33/306 (10%), Positives = 82/306 (26%), Gaps = 46/306 (15%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
           ++D  ++    +         G K    ++  +K      + + +  +      G  + S
Sbjct: 67  ILD-NRIEKIANCFKQASDEYGYKAQNFIIYPIKVNQMRPVVEEIIGHGKKFNLGLEAGS 125

Query: 60  LYEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
             E+          ++      YKD     +      +       + K  +         
Sbjct: 126 KPELHAVIAVNTDSDSLIICNGYKDESYIELALLAQKMGKRIFLVVEKINELTLIAKMAK 185

Query: 119 GLRINPSV-------SYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMF 163
            L + P++       S       +     S+ G    + +E+            +  + F
Sbjct: 186 QLNVRPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDFLEKKDLTDCLKLIHF 245

Query: 164 HNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
           H   +    +              +       IE++ +GGG+          +    +  
Sbjct: 246 HIGSQVTKIRRIKTALREASQFYVQLHAMGFNIEFVDIGGGLGVDYDGTRSSNSESSVNY 305

Query: 221 FSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD 262
             ++Y                     I  E G ++  + + L   VL+ +   +     +
Sbjct: 306 SIQEYVNDSISTMVDASDKNGIPHPNIITESGRSLTAHHSVLIFEVLETATLPEMDEDFE 365

Query: 263 SSVEAH 268
            S   H
Sbjct: 366 VSESDH 371


>gi|188574481|ref|YP_001911410.1| arginine decarboxylase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188518933|gb|ACD56878.1| biosynthetic arginine decarboxylase [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 628

 Score = 66.7 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 53/364 (14%), Positives = 105/364 (28%), Gaps = 54/364 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53
           P  +     L   L         A        G   +  +K     G+  TL  +     
Sbjct: 59  PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLASHHGDGF 118

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKF 107
           G  + S  E+M                YKD E   +            I+    S+LN  
Sbjct: 119 GLEAGSKPELMAVLALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELNLV 178

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158
            ++A+ L  K GL +   ++         +     + G   +  ++            ++
Sbjct: 179 LEEARALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADSL 238

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC 215
           N L FH   +  +    +  ++   + F        +I  + +GGG+    +    + +C
Sbjct: 239 NLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSYC 298

Query: 216 QR--------------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
                           L    E++     +I  E G A+  +   L   V ++ +  +  
Sbjct: 299 SINYGLHSYASNIVQPLASACEEHGLAPPRIVTECGRAMTAHHAVLIANVSEVEQAPEGR 358

Query: 259 VIVDSSVE----AHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313
           V    + E     H+ +          +            G   L+    G+       +
Sbjct: 359 VPDAHADEPAAIRHLREIHDELDVRPAVELFQEAQHFHAEG---LSAYALGQIDLTHRAR 415

Query: 314 IGDR 317
           I D 
Sbjct: 416 IDDL 419


>gi|122878996|ref|YP_198859.6| arginine decarboxylase [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 628

 Score = 66.7 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 53/364 (14%), Positives = 105/364 (28%), Gaps = 54/364 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53
           P  +     L   L         A        G   +  +K     G+  TL  +     
Sbjct: 59  PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLASHHGDGF 118

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKF 107
           G  + S  E+M                YKD E   +            I+    S+LN  
Sbjct: 119 GLEAGSKPELMAVLALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELNLV 178

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158
            ++A+ L  K GL +   ++         +     + G   +  ++            ++
Sbjct: 179 LEEARALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADSL 238

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC 215
           N L FH   +  +    +  ++   + F        +I  + +GGG+    +    + +C
Sbjct: 239 NLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSYC 298

Query: 216 QR--------------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
                           L    E++     +I  E G A+  +   L   V ++ +  +  
Sbjct: 299 SINYGLHSYASNIVQPLASACEEHGLAPPRIVTECGRAMTAHHAVLIANVSEVEQAPEGR 358

Query: 259 VIVDSSVE----AHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313
           V    + E     H+ +          +            G   L+    G+       +
Sbjct: 359 VPDAHADEPAAIRHLREIHDELDVRPAVELFQEAQHFHAEG---LSAYALGQIDLTHRAR 415

Query: 314 IGDR 317
           I D 
Sbjct: 416 IDDL 419


>gi|78214019|ref|YP_382798.1| arginine decarboxylase [Synechococcus sp. CC9605]
 gi|78198478|gb|ABB36243.1| arginine decarboxylase [Synechococcus sp. CC9605]
          Length = 642

 Score = 66.7 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/234 (11%), Positives = 67/234 (28%), Gaps = 31/234 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLA--------LKCFAAWGMFDTLNQYM---- 52
           P  +     L + L+      + A  +   A        +KC     + + L        
Sbjct: 63  PLLIRFDDILEDRLERLHAAFERAIAQYSYAGRYQGVFPVKCNQQRHVVEELVSCGKRWN 122

Query: 53  DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105
            G  + S  E+++        E       YKD            +      +     +++
Sbjct: 123 FGLEAGSKAELLIALSLLDDPEALLICNGYKDRLYIETAILARRLGRQPVVVIEQPDEVD 182

Query: 106 KFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKI--------ESEIK 156
           +  + ++ L     + +   +S              ++ G    + +         + ++
Sbjct: 183 RIIEASKSLGAAPYIGVRAKLSSRSTGRWGSSVGDKAKFGLSIPELLATVERLRDNNLLQ 242

Query: 157 NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK 207
           ++  L FH   +          L+    I  E       + ++ +GGG+     
Sbjct: 243 DLRLLHFHIGSQINDIAVLKDALQEAGQIYVELTRLGAPMGFLDVGGGLGIDYD 296


>gi|77748748|ref|NP_644224.2| arginine decarboxylase [Xanthomonas axonopodis pv. citri str. 306]
 gi|48474491|sp|Q8PFQ5|SPEA_XANAC RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
          Length = 628

 Score = 66.7 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 51/364 (14%), Positives = 102/364 (28%), Gaps = 54/364 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53
           P  +     L   L         A        G   +  +K     G+  TL  +     
Sbjct: 59  PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLASHHGEGF 118

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------F 107
           G  + S  E+M                YKD E   +      +   T   + K       
Sbjct: 119 GLEAGSKPELMAVLALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELTLV 178

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158
            ++A+ L  K GL +   ++         +     + G   +  ++            ++
Sbjct: 179 LEEARALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADSL 238

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC 215
           N L FH   +  +    +  ++   + F        +I  + +GGG+    +    + +C
Sbjct: 239 NLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSYC 298

Query: 216 QR--------------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
                           L    E++     +I  E G A+  +   L   V ++ +  +  
Sbjct: 299 SINYGLHSYASNIVQPLASACEEHGLTPPRIVTECGRAMTAHHAVLIANVSEVEQAPEGR 358

Query: 259 VIVDSSVE----AHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313
           V      E     H+ +          +            G   L+    G+       +
Sbjct: 359 VPDAHDDEPAAIRHLREIHDELDVRPAVELFQEAQHFHAEG---LSAYALGQIDLTHRAR 415

Query: 314 IGDR 317
           I D 
Sbjct: 416 IDDL 419


>gi|166713840|ref|ZP_02245047.1| arginine decarboxylase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 628

 Score = 66.7 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 53/364 (14%), Positives = 104/364 (28%), Gaps = 54/364 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53
           P  +     L   L         A        G   +  +K     G+  TL  +     
Sbjct: 59  PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLASHHGEGF 118

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKF 107
           G  + S  E+M                YKD E   +            I+    S+LN  
Sbjct: 119 GLEAGSKPELMAVLALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELNLV 178

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158
            ++A+ L  K GL +   ++         +     + G   +  ++            ++
Sbjct: 179 LEEARALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADSL 238

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC 215
           N L FH   +  +    +  ++   + F        +I  + +GGG+    +    + +C
Sbjct: 239 NLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSYC 298

Query: 216 QR--------------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
                           L    E++     +I  E G A+  +   L   V ++ +  +  
Sbjct: 299 SINYGLHSYASNIVQPLASACEEHGLAPPRIVTECGRAMTAHHAVLIANVSEVEQAPEGR 358

Query: 259 VIVDSSVE----AHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313
           V      E     H+ +          +            G   L+    G+       +
Sbjct: 359 VPDAHDDEPAAIRHLREIHDELDVRPAVELFQEAQHFHAEG---LSAYALGQIDLTHRAR 415

Query: 314 IGDR 317
           I D 
Sbjct: 416 IDDL 419


>gi|81299846|ref|YP_400054.1| arginine decarboxylase [Synechococcus elongatus PCC 7942]
 gi|81168727|gb|ABB57067.1| arginine decarboxylase [Synechococcus elongatus PCC 7942]
          Length = 647

 Score = 66.7 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/267 (10%), Positives = 73/267 (27%), Gaps = 32/267 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLA--------LKCFAAWGMFDTLNQYM---- 52
           P  +     L + ++        A  +   A        +KC     + ++L  Y     
Sbjct: 76  PLLIRFPDILEDRIERLNACFAKAIARYNYAGEYRGVFPVKCNQQRHLIESLVNYGRPFQ 135

Query: 53  DGTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK--D 109
            G  + S  E+++                YKD +          +    +  + + +  D
Sbjct: 136 FGLEAGSKPELLIALAHLDTPGALLICNGYKDRDYIETAILGRRLGKTPILVIEQLEEVD 195

Query: 110 KAQKLHKKIGLRINPSVSYS-----KFILADPNRPFSRLGEKCKDKIES--------EIK 156
            A    +++G+     V                   ++ G    + + +         + 
Sbjct: 196 VAIAASQRLGIEPILGVRAKLNARGMGRWGSSAGDRAKFGLTMPEIVAAVEKLQAANLLH 255

Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD 213
            +  L FH   +          ++   +   +       + ++ +GGG+           
Sbjct: 256 CLQLLHFHIGSQISDISVLKDAIQEAAQIYVQLAALGADMRYLDVGGGLGVDYDGSKTNF 315

Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTN 240
              +     + Y+  +     +A   +
Sbjct: 316 HASK-NYNMQTYANDVVATIKDACQAH 341


>gi|56750519|ref|YP_171220.1| arginine decarboxylase [Synechococcus elongatus PCC 6301]
 gi|56685478|dbj|BAD78700.1| arginine decarboxylase [Synechococcus elongatus PCC 6301]
          Length = 651

 Score = 66.7 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/267 (10%), Positives = 73/267 (27%), Gaps = 32/267 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLA--------LKCFAAWGMFDTLNQYM---- 52
           P  +     L + ++        A  +   A        +KC     + ++L  Y     
Sbjct: 80  PLLIRFPDILEDRIERLNACFAKAIARYNYAGEYRGVFPVKCNQQRHLIESLVNYGRPFQ 139

Query: 53  DGTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK--D 109
            G  + S  E+++                YKD +          +    +  + + +  D
Sbjct: 140 FGLEAGSKPELLIALAHLDTPGALLICNGYKDRDYIETAILGRRLGKTPILVIEQLEEVD 199

Query: 110 KAQKLHKKIGLRINPSVSYS-----KFILADPNRPFSRLGEKCKDKIES--------EIK 156
            A    +++G+     V                   ++ G    + + +         + 
Sbjct: 200 VAIAASQRLGIEPILGVRAKLNARGMGRWGSSAGDRAKFGLTMPEIVAAVEELQAANLLH 259

Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPVKD 213
            +  L FH   +          ++   +   +       + ++ +GGG+           
Sbjct: 260 CLQLLHFHIGSQISDISVLKDAIQEAAQIYVQLAALGADMRYLDVGGGLGVDYDGSKTNF 319

Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTN 240
              +     + Y+  +     +A   +
Sbjct: 320 HASK-NYNMQTYANDVVATIKDACQAH 345


>gi|294624828|ref|ZP_06703487.1| arginine decarboxylase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292600861|gb|EFF44939.1| arginine decarboxylase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 628

 Score = 66.7 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 51/364 (14%), Positives = 102/364 (28%), Gaps = 54/364 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53
           P  +     L   L         A        G   +  +K     G+  TL  +     
Sbjct: 59  PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLASHHGEGF 118

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------F 107
           G  + S  E+M                YKD E   +      +   T   + K       
Sbjct: 119 GLEAGSKPELMAVLALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELTLV 178

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158
            ++A+ L  K GL +   ++         +     + G   +  ++            ++
Sbjct: 179 LEEARALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADSL 238

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC 215
           N L FH   +  +    +  ++   + F        +I  + +GGG+    +    + +C
Sbjct: 239 NLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSYC 298

Query: 216 QR--------------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
                           L    E++     +I  E G A+  +   L   V ++ +  +  
Sbjct: 299 SINYGLHSYASNIVQPLASACEEHGLTPPRIVTECGRAMTAHHAVLIANVSEVEQAPEGR 358

Query: 259 VIVDSSVE----AHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313
           V      E     H+ +          +            G   L+    G+       +
Sbjct: 359 VPDAHDDEPAAIRHLREIHDELDVRPAVELFQEAQHFHAEG---LSAYALGQIDLTHRAR 415

Query: 314 IGDR 317
           I D 
Sbjct: 416 IDDL 419


>gi|294667461|ref|ZP_06732678.1| arginine decarboxylase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292602794|gb|EFF46228.1| arginine decarboxylase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 628

 Score = 66.7 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 51/364 (14%), Positives = 102/364 (28%), Gaps = 54/364 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53
           P  +     L   L         A        G   +  +K     G+  TL  +     
Sbjct: 59  PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLASHHGEGF 118

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------F 107
           G  + S  E+M                YKD E   +      +   T   + K       
Sbjct: 119 GLEAGSKPELMAVLALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELTLV 178

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158
            ++A+ L  K GL +   ++         +     + G   +  ++            ++
Sbjct: 179 LEEARALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADSL 238

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC 215
           N L FH   +  +    +  ++   + F        +I  + +GGG+    +    + +C
Sbjct: 239 NLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSYC 298

Query: 216 QR--------------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
                           L    E++     +I  E G A+  +   L   V ++ +  +  
Sbjct: 299 SINYGLHSYASNIVQPLASACEEHGLTPPRIVTECGRAMTAHHAVLIANVSEVEQAPEGR 358

Query: 259 VIVDSSVE----AHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313
           V      E     H+ +          +            G   L+    G+       +
Sbjct: 359 VPDAHDDEPAAIRHLREIHDELDVRPAVELFQEAQHFHAEG---LSAYALGQIDLTHRAR 415

Query: 314 IGDR 317
           I D 
Sbjct: 416 IDDL 419


>gi|22299350|ref|NP_682597.1| arginine decarboxylase [Thermosynechococcus elongatus BP-1]
 gi|48474852|sp|Q8DHY6|SPEA_THEEB RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|22295533|dbj|BAC09359.1| arginine decarboxylase [Thermosynechococcus elongatus BP-1]
          Length = 637

 Score = 66.7 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 40/313 (12%), Positives = 95/313 (30%), Gaps = 48/313 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52
           P  L     L + ++        A          K +  +KC     + + L ++     
Sbjct: 67  PLLLRFSDILEDRIERLNACFARAIARYGYQGAYKGVFPIKCNQQRHIIEALVRFGQSHQ 126

Query: 53  DGTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCD------TIIFNTVSQLN 105
            G  + S  E+++                YKD                  I+     ++ 
Sbjct: 127 FGLEAGSKPELLIALAMLNTPGALLICNGYKDRSYIETAILARRLGHTSIIVLEQPEEVA 186

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK-------- 156
           +    +Q L  +  + +   +S         +     + G    + + +  +        
Sbjct: 187 EVIAVSQALGIEPIVGVRAKLSTQGVGRWGTSAGDRAKFGLTVPEILTAVEQLRAAGMLN 246

Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTD------- 206
            +  L FH   +  +       ++   + +G        ++++ +GGG+           
Sbjct: 247 ALQLLHFHIGSQISAISVIKDAIREAGQIYGELVRLGANMQYLDVGGGLGVDYDGSKTNF 306

Query: 207 ---KDYPVKDFCQRLKEFSEKYSVQI-------YLEPGEAIVTNTTTLNTTVLDISENIK 256
              K+Y ++++   +    +    Q          E G AI ++ + L   VL +SE  K
Sbjct: 307 HASKNYSMQNYASDVVAGIKDACRQRGIPDPTLISESGRAIASHQSVLIFNVLGVSEVPK 366

Query: 257 NLVIVDSSVEAHV 269
                 ++ E  +
Sbjct: 367 ITPEPATAEEHLI 379


>gi|21110327|gb|AAM38760.1| biosynthetic arginine decarboxylase [Xanthomonas axonopodis pv.
           citri str. 306]
          Length = 645

 Score = 66.7 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 51/364 (14%), Positives = 102/364 (28%), Gaps = 54/364 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53
           P  +     L   L         A        G   +  +K     G+  TL  +     
Sbjct: 76  PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLASHHGEGF 135

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------F 107
           G  + S  E+M                YKD E   +      +   T   + K       
Sbjct: 136 GLEAGSKPELMAVLALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELTLV 195

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158
            ++A+ L  K GL +   ++         +     + G   +  ++            ++
Sbjct: 196 LEEARALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADSL 255

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC 215
           N L FH   +  +    +  ++   + F        +I  + +GGG+    +    + +C
Sbjct: 256 NLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSYC 315

Query: 216 QR--------------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
                           L    E++     +I  E G A+  +   L   V ++ +  +  
Sbjct: 316 SINYGLHSYASNIVQPLASACEEHGLTPPRIVTECGRAMTAHHAVLIANVSEVEQAPEGR 375

Query: 259 VIVDSSVE----AHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313
           V      E     H+ +          +            G   L+    G+       +
Sbjct: 376 VPDAHDDEPAAIRHLREIHDELDVRPAVELFQEAQHFHAEG---LSAYALGQIDLTHRAR 432

Query: 314 IGDR 317
           I D 
Sbjct: 433 IDDL 436


>gi|300934325|ref|ZP_07149581.1| putative diaminopimelate decarboxylase [Corynebacterium resistens
           DSM 45100]
          Length = 517

 Score = 66.7 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/217 (13%), Positives = 68/217 (31%), Gaps = 21/217 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           P+++++  +  +NL     + K  GVK  +  A K   +      + +   G   +S  E
Sbjct: 58  PFHVLNPAQFRSNLRGFAEVCKAVGVKATIYFARKANKSECWIPVVAEEAHGVDVASGPE 117

Query: 63  VMLGHEKFGG--ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            +                    +  ++  L +   ++ ++ S+L +    A K+      
Sbjct: 118 FIGAISGGVPAHNLVVTGAEKPESLLELALRHGSLLVVDSPSELFRVSTLAAKVETGSQA 177

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESE---------IKNVNGLMFHNNCENKS 171
           ++   +           +  SR G    + + +            N  G  FH N  +  
Sbjct: 178 QLLLRLLPDT-------QTDSRFGTSASEWMWALASLSEKQRTCINCAGASFHLNGYSAE 230

Query: 172 FLCFSAMLKN-IEKEFGHFITQIEWISLGGGIHFTDK 207
                A L     +       ++  + +GGG      
Sbjct: 231 ERGHQAHLALDFLEVLKTDGWRVHTLDIGGGFSIQYC 267



 Score = 49.4 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 3/84 (3%)

Query: 276 QESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFE--KPVKIGDRISFEDVAGYNINRK-N 332
           + +AT      P  A V G SC+  D+         +  + GD + + + AGY +++  +
Sbjct: 427 RRNATKEREDEPTAACVGGSSCMEYDMLTWRIVPLQRRPQRGDLLIYHNTAGYQMDKNES 486

Query: 333 WFNGINMPTIAVKNVDGTIKAIRE 356
            F+ + +P   V + +GT+  I  
Sbjct: 487 EFHQLRLPMRFVYDGEGTLPRIDR 510


>gi|84621852|ref|YP_449224.1| arginine decarboxylase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|58424437|gb|AAW73474.1| biosynthetic arginine decarboxylase [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84365792|dbj|BAE66950.1| biosynthetic arginine decarboxylase [Xanthomonas oryzae pv. oryzae
           MAFF 311018]
          Length = 645

 Score = 66.7 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 53/364 (14%), Positives = 105/364 (28%), Gaps = 54/364 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53
           P  +     L   L         A        G   +  +K     G+  TL  +     
Sbjct: 76  PLLVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLASHHGDGF 135

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKF 107
           G  + S  E+M                YKD E   +            I+    S+LN  
Sbjct: 136 GLEAGSKPELMAVLALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELNLV 195

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158
            ++A+ L  K GL +   ++         +     + G   +  ++            ++
Sbjct: 196 LEEARALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADSL 255

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC 215
           N L FH   +  +    +  ++   + F        +I  + +GGG+    +    + +C
Sbjct: 256 NLLHFHMGSQISNVRDIANGMREATRYFVELSRLGAKISHVDVGGGLGIDYEGTRSRSYC 315

Query: 216 QR--------------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
                           L    E++     +I  E G A+  +   L   V ++ +  +  
Sbjct: 316 SINYGLHSYASNIVQPLASACEEHGLAPPRIVTECGRAMTAHHAVLIANVSEVEQAPEGR 375

Query: 259 VIVDSSVE----AHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313
           V    + E     H+ +          +            G   L+    G+       +
Sbjct: 376 VPDAHADEPAAIRHLREIHDELDVRPAVELFQEAQHFHAEG---LSAYALGQIDLTHRAR 432

Query: 314 IGDR 317
           I D 
Sbjct: 433 IDDL 436


>gi|262193352|ref|YP_003264561.1| arginine decarboxylase [Haliangium ochraceum DSM 14365]
 gi|262076699|gb|ACY12668.1| arginine decarboxylase [Haliangium ochraceum DSM 14365]
          Length = 650

 Score = 66.7 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 38/299 (12%), Positives = 86/299 (28%), Gaps = 49/299 (16%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM- 52
           I TP  L     L + ++       +A          + +  +K   +  +   + ++  
Sbjct: 70  IPTPILLRFSDILRSRIELLNQAFGSAIAEYEYRGQYRGVYPIKVNQSRIVVQEIIEFGR 129

Query: 53  ---DGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVL------SNCDTIIFNTVS 102
               G  + S  E++         +       YKD E                ++     
Sbjct: 130 PYHYGLEAGSKPELLAVMAVHDDPDALIICNGYKDDEYIETALSASRLGRKVVLVIEKPD 189

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI------ 155
           +++     AQ L  +  + +   +S       + +     + G    + +++        
Sbjct: 190 EIDHIHSVAQSLGIRPTVGMRARLSARGAGRWEQSGGDRSKFGLSPAEMLQAVDKLRSWG 249

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFIT----QIEWISLGGGIHFTDK-- 207
               +  L FH   +  S       L+   + F          +++  +GGG+       
Sbjct: 250 QLDGLELLHFHLGSQISSIRSIKTALREAGRLFVELHKLGCEGLQYFDVGGGLGVDYDGS 309

Query: 208 ---------------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251
                             V    Q + + +E     I  E G A+  + + L   VL +
Sbjct: 310 QTNFASSMNYTVQEYANDVVFTIQEICDEAEVPHPNIVTESGRAVAAHHSVLVVDVLAV 368


>gi|282877082|ref|ZP_06285924.1| arginine 2-monooxygenase [Prevotella buccalis ATCC 35310]
 gi|281300764|gb|EFA93091.1| arginine 2-monooxygenase [Prevotella buccalis ATCC 35310]
          Length = 630

 Score = 66.7 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/260 (10%), Positives = 71/260 (27%), Gaps = 28/260 (10%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
           ++D  ++           K    K    ++  +K      + + +  +      G  + S
Sbjct: 67  ILD-NRIEKTASCFAQAAKEYDYKAENFIIYPIKVNQMQPVVEEIISHGQKFNLGLEAGS 125

Query: 60  LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112
             E+          ++      YKD            +     I+   +++L+     A+
Sbjct: 126 KPELHAVIAVQCQSDSLIICNGYKDQSYIELALLAQKMGKRIFIVIEKLNELDIIAKAAK 185

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK--------NVNGLMF 163
           K+  +  + I   ++ S       +    S+ G    + + +            ++ + F
Sbjct: 186 KIGVRPNIGIRIKLASSGSGKWADSGGDASKFGLNSSELLLALKMLEEKGLKDCLHLIHF 245

Query: 164 HNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
           H   +                           ++++  GGG+               +  
Sbjct: 246 HIGSQITKIRRIQTALREAAQYYINLHKMGYNVDFVDCGGGLGVDYDGTRSSSSESSVNY 305

Query: 221 FSEKYSVQIYLEPGEAIVTN 240
             ++Y         +A   N
Sbjct: 306 SIQEYVNDCIYTFIDAANKN 325


>gi|288801683|ref|ZP_06407125.1| arginine 2-monooxygenase [Prevotella melaninogenica D18]
 gi|302344910|ref|YP_003813263.1| arginine 2-monooxygenase [Prevotella melaninogenica ATCC 25845]
 gi|288335725|gb|EFC74158.1| arginine 2-monooxygenase [Prevotella melaninogenica D18]
 gi|302149054|gb|ADK95316.1| arginine 2-monooxygenase [Prevotella melaninogenica ATCC 25845]
          Length = 630

 Score = 66.7 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/260 (11%), Positives = 74/260 (28%), Gaps = 28/260 (10%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
           ++D  ++          RK    K    ++  +K      + + +  +      G  + S
Sbjct: 67  ILD-NRIEKTSSCFEKARKEYDFKAENFIIYPIKVNQMQPVVEEIISHGRKFNLGLEAGS 125

Query: 60  LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112
             E+          ++      YKD            +     I+   +++++     A+
Sbjct: 126 KPELHAVIAVQCQSDSLIICNGYKDQSYIELALLAQKMGKRIFIVVEKLNEIDLIARAAK 185

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIES--------EIKNVNGLMF 163
           KL+ K  L I   ++ S       +    S+ G    + +++            ++ + F
Sbjct: 186 KLNVKPNLGIRIKLASSGSGKWADSGGDASKFGLTSSELLQALETLDNKGLHDCLHLIHF 245

Query: 164 HNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
           H   +                           ++++  GGG+               +  
Sbjct: 246 HIGSQITKIRRIQTALNEAAQYYVNLRKMGYNVDFVDCGGGLGVDYDGTRSASSESSVNY 305

Query: 221 FSEKYSVQIYLEPGEAIVTN 240
             ++Y         +A   N
Sbjct: 306 SIQEYVNDCVYTFVDAANKN 325


>gi|333026504|ref|ZP_08454568.1| putative orn/DAP/Arg decarboxylase, family 2 [Streptomyces sp.
           Tu6071]
 gi|332746356|gb|EGJ76797.1| putative orn/DAP/Arg decarboxylase, family 2 [Streptomyces sp.
           Tu6071]
          Length = 448

 Score = 66.7 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 43/367 (11%), Positives = 91/367 (24%), Gaps = 32/367 (8%)

Query: 8   LIDKQKLLNNLDTALYIRK------NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           L+D   +                     V+   A++      +   L +   G   +S  
Sbjct: 42  LLDVTGIRRTARALQSAFAPLVAEGGPAVRHTFAVRATPLVPVLRLLYEDRIGAEVASAA 101

Query: 62  EVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+ L        G T   +      E+   L +   +  +   +L +      +      
Sbjct: 102 ELALARAAGVQPGHTVLDSPTKTVAELREALGSGVLVDVDDAQELERLDALRGEAAATST 161

Query: 120 LRINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN-------KS 171
             +        +               +      +E   +  L  H+  +N       + 
Sbjct: 162 FGVRVDPHAGAERRAVFGVALGHEGAREWILSAFAERPWLTRLHAHSEVKNAGGVAPERL 221

Query: 172 FLCFSAMLKNIEKEFGHFITQ---------IEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
                 + +  E+       +                 G            +   LKE  
Sbjct: 222 AEGVRKVYELAEEINAAAGRRQVDALALGGGLAAGAREGDTGDGDGADFAGYAALLKETV 281

Query: 223 EKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE---AHVPDYLLYQ 276
                    +    G +++     L   V  +       + V  +      H     L  
Sbjct: 282 PGLFDGRYALVTGFGRSLLAGHGFLLARVEYVRAMGGRRLAVTHAGTRMAGHACGRRLAA 341

Query: 277 ESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
             A   P  GP  A  + G +   G++         ++ GD ++  D   Y   R   ++
Sbjct: 342 YDAQGRPKEGPALAQDLAGPAQFDGELLASGVELPELEQGDWLAVLDTGAYGFARHQAYD 401

Query: 336 GINMPTI 342
            +  P I
Sbjct: 402 SLTRPGI 408


>gi|294645219|ref|ZP_06722938.1| putative arginine decarboxylase [Bacteroides ovatus SD CC 2a]
 gi|292639462|gb|EFF57761.1| putative arginine decarboxylase [Bacteroides ovatus SD CC 2a]
          Length = 330

 Score = 66.7 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/265 (10%), Positives = 78/265 (29%), Gaps = 31/265 (11%)

Query: 2   IKTPYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM- 52
           + +P  +     L N ++          +  G K    ++  +K      + + +  +  
Sbjct: 56  VASPMLVRFPDILDNRIEKMSSCFKQAAEEYGYKAQNFIIYPIKVNQMRPVVEEIISHGK 115

Query: 53  ---DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVS 102
               G  + S  E+          ++      YKD            +     ++   ++
Sbjct: 116 KFNLGLEAGSKPELHAVIAVNTDSDSLIVCNGYKDESYIELALLAQKMGKRIYLVVEKMN 175

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK----- 156
           +L      A++L+ +  + I   ++ S     + +    S+ G    + +E+        
Sbjct: 176 ELKLIAKMAKQLNVQPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDFLESKG 235

Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
               +  + FH   +    +              +       +E++ +GGG+        
Sbjct: 236 LKDCLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHSMGFNVEFVDIGGGLGVDYDGTR 295

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGE 235
             +    +    ++Y         +
Sbjct: 296 SSNSEGSVNYSIQEYVNDSISTLVD 320


>gi|68537075|ref|YP_251780.1| putative diaminopimelate decarboxylase [Corynebacterium jeikeium
           K411]
 gi|260579419|ref|ZP_05847301.1| diaminopimelate decarboxylase [Corynebacterium jeikeium ATCC 43734]
 gi|68264674|emb|CAI38162.1| putative diaminopimelate decarboxylase [Corynebacterium jeikeium
           K411]
 gi|258602548|gb|EEW15843.1| diaminopimelate decarboxylase [Corynebacterium jeikeium ATCC 43734]
          Length = 472

 Score = 66.7 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/214 (12%), Positives = 62/214 (28%), Gaps = 14/214 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           P++++   +L  NL       ++      +  A K   A      +     G   +S  E
Sbjct: 35  PFHVLYPAQLRTNLRDFATTAQDMNVDCTVFFARKANKAECWLQEIAAADQGVDVASGPE 94

Query: 63  VMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK------AQKL 114
           ++        G +         D  +   + +  TI  ++  +L +  D       A   
Sbjct: 95  LVGALAGGIRGTKLVITGAEKADNLLWLGIRHGCTIAADSPGELQRILDITRRETSAHHT 154

Query: 115 HKKIGLRINPSVSYSKFILA-DPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFL 173
                + +    +           + +S       +    +  ++ G  FH N  +    
Sbjct: 155 DGHTRVLLRILPAEQTESRFGCTPQEWSACISGLPEL--GKHVDIVGSCFHLNEYSSEQR 212

Query: 174 CFSAMLKN-IEKEFGHFITQIEWISLGGGIHFTD 206
              A       +E      + + + +GGG     
Sbjct: 213 GKEAHRSLDFMRELRRKGWRADTLDIGGGFSVRY 246


>gi|255547510|ref|XP_002514812.1| ornithine decarboxylase, putative [Ricinus communis]
 gi|223545863|gb|EEF47366.1| ornithine decarboxylase, putative [Ricinus communis]
          Length = 203

 Score = 66.7 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 44/141 (31%), Gaps = 5/141 (3%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P+Y++D   +++ ++   +      VK   A+K      +   L         +S  E+ 
Sbjct: 55  PFYILDIGVVISLVEKWSHHL--PHVKPFYAVKRNNESALLIVLATLGANFDCASQAEIE 112

Query: 65  LGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                    +   Y    K       A         F++  +++K +    +    +   
Sbjct: 113 AILGLGISPDRILYANPCKSVSHIKYAARVGVYLTTFDSKEEVDKIRKWHPQCSLLLRAE 172

Query: 122 INPSVSYSKFILADPNRPFSR 142
           I    S    + A+    F R
Sbjct: 173 IQNDKSSWIHLAANMAHIFLR 193


>gi|327312900|ref|YP_004328337.1| arginine 2-monooxygenase [Prevotella denticola F0289]
 gi|326945361|gb|AEA21246.1| arginine 2-monooxygenase [Prevotella denticola F0289]
          Length = 630

 Score = 66.3 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/256 (11%), Positives = 75/256 (29%), Gaps = 28/256 (10%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
           ++D  ++          RK  G K    ++  +K      + + +  +      G  + S
Sbjct: 67  ILD-NRIEKTSSCFEKARKEYGFKAENFIIYPVKVNQMQPVVEEIISHGRKFNLGLEAGS 125

Query: 60  LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112
             E+          ++      YKD            +     I+   +++++     A+
Sbjct: 126 KPELHAVIAVQCQSDSLIVCNGYKDQSYIELALLAQKMGKRIFIVVEKLNEIDLIARAAK 185

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIES--------EIKNVNGLMF 163
           KL+ K  L I   ++ S       +    S+ G    + +++            ++ + F
Sbjct: 186 KLNVKPNLGIRIKLASSGSGKWAESGGDASKFGLTSSELLQALETLDEKGLHDCLHLIHF 245

Query: 164 HNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
           H   +                           ++++  GGG+          +    +  
Sbjct: 246 HIGSQITKIRRIQTALNEAAQYYVNLRRMGYGVDFVDCGGGLGVDYDGTRSSNSESSVNY 305

Query: 221 FSEKYSVQIYLEPGEA 236
             ++Y         +A
Sbjct: 306 SIQEYVNDCVYTFVDA 321


>gi|15836749|ref|NP_297437.1| arginine decarboxylase [Xylella fastidiosa 9a5c]
 gi|48474999|sp|Q9PH02|SPEA_XYLFA RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|9104933|gb|AAF82957.1|AE003868_3 biosynthetic arginine decarboxylase [Xylella fastidiosa 9a5c]
          Length = 628

 Score = 66.3 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 53/364 (14%), Positives = 98/364 (26%), Gaps = 54/364 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53
           P  L     L + L         A        G   +  +K     G+   L  +     
Sbjct: 59  PLLLRFPDILGHRLGKLQAAFAQAQSEWEYAGGYTAVYPIKVNQHRGVAGVLASHQGDGF 118

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKF 107
           G  + S  E+M                YKD E   +            I+    S+L   
Sbjct: 119 GLEAGSKPELMAVLALSRPGGLIVCNGYKDREYIRLALIGRKLGLKTFIVIEKPSELRMV 178

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158
            ++A+ L    GL +   ++         +     + G   +  ++             +
Sbjct: 179 LEEAKTLGVLPGLGVRVRLASLGAGKWQNSGGDKAKFGLSPRQVLDVWKVLRGTEYADCL 238

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC 215
           N + FH   +  +    +  ++   + F        +I  + +GGG+    +    +  C
Sbjct: 239 NVMHFHMGSQISNVRDIAKGMREATRYFVELSRLGAKITHVDVGGGLGIDYEGTRSRSDC 298

Query: 216 QR--------------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
                           L    E Y     +I  E G A+  +   L   V ++    +  
Sbjct: 299 SINYGLQAYASHIVQPLASACEDYDLVPPRIVTECGRAMTAHHAVLIANVTEVEAVPEGR 358

Query: 259 VIVDSSVE----AHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313
           V      E     H+ +          I            G   LA    G+       +
Sbjct: 359 VPGVCDDEPAVVRHMREIYGELDARPAIELFYEAQHFHAEG---LAAYTLGQIDLVHRAR 415

Query: 314 IGDR 317
           I D 
Sbjct: 416 IDDL 419


>gi|329934469|ref|ZP_08284548.1| lysine/ornithine decarboxylase [Streptomyces griseoaurantiacus
           M045]
 gi|329306065|gb|EGG49920.1| lysine/ornithine decarboxylase [Streptomyces griseoaurantiacus
           M045]
          Length = 508

 Score = 66.3 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 24/231 (10%), Positives = 60/231 (25%), Gaps = 19/231 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYM---DGTT 56
           + +P  ++  + +  N +    + +   +  ++  A K   +  +   L        G  
Sbjct: 33  LGSPLNVLLPEAVAANAERFRSVLRRHHLAGRVYFAHKANRSSALVRRLAACDTAAVGID 92

Query: 57  SSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            +SL E+       F G+            +        T+  ++  +L++     +K  
Sbjct: 93  VASLEELRHALASGFSGDRVMATGPKDPEFLWLAARVGATVNLDSPGELDELAALVRKYG 152

Query: 116 KKIGLRIN----PSVSYSKFILADPNRPFSRLGEKCKDK--------IESEIKNVNGLMF 163
                 +                      SR G    +           ++   + GL  
Sbjct: 153 LARTDVLVRLSGFESDPGPGAGTRLLARRSRFGTPVAEAEKLWTALERHADSVRLVGLAH 212

Query: 164 HN-NCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213
           H      +           +  E          + +GGG      +   + 
Sbjct: 213 HLDTTGLEEKARALERCVLLMDECRARGLAPRAVDIGGGFGAAYVEDAGEW 263



 Score = 45.1 bits (105), Expect = 0.017,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 41/128 (32%), Gaps = 23/128 (17%)

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLL--------- 274
           ++   +YLEPG A+V         V+++    +        +  +  D  +         
Sbjct: 337 EHLDDLYLEPGRALVDQCGLSLARVVEVRPLGEAPDRYLVRLAMNAGDVSMEEHGVLADP 396

Query: 275 ------------YQESATIYPNTGPYTAMVCGRSCLAGDIFGEF-HFEKPV-KIGDRISF 320
                                  GP    + G  CL  D+      F   + + GD ++F
Sbjct: 397 VLLPRGESAPVSGAADGGPAETEGPVGVHLVGNLCLEADLITRRLVFLPRLPRPGDLLAF 456

Query: 321 EDVAGYNI 328
            + AGY +
Sbjct: 457 VNTAGYLM 464


>gi|227115165|ref|ZP_03828821.1| arginine decarboxylase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 660

 Score = 66.3 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 79/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A        G  L+  +K      + ++L       G
Sbjct: 88  PALFCFPQILQHRLRSINAAFKQARESFGYEGGYFLVYPIKVNQHRRVIESLANSGEPLG 147

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  LGH          N       I        L +   ++   +S++   
Sbjct: 148 LEAGSKAELMAVLGHAGMTRTVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIRLV 207

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 208 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAAVQVLQLVEMLREAGKLDSL 267

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 268 QLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 327

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  +    G+A   +
Sbjct: 328 S-VNYGLNEYANNVIWGIGDACNEH 351


>gi|144899973|emb|CAM76837.1| ornithine decarboxylase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 306

 Score = 66.3 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 33/270 (12%), Positives = 81/270 (30%), Gaps = 23/270 (8%)

Query: 48  LNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQL 104
           L         +S  EV L  E     +  ++    K     A           F++ ++L
Sbjct: 2   LVGLGSSFDVASRGEVDLCLENGARADNISFGNTIKKQSDIAYAYSKGVRLYAFDSEAEL 61

Query: 105 NKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFH 164
            K  + A        + +    +     L+        + +    K      +  G+ FH
Sbjct: 62  EKLAESAPGSRVFCRILMTCDGAEW--PLSRKFGCEIEMAKDLLVKARELGMDPYGVSFH 119

Query: 165 NNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDY--PVKDFCQRLK 219
              +      +   +      F         ++ ++LGGG     +     V+ +   + 
Sbjct: 120 VGSQQTDLNQWDIAVGKAAMLFTALNEAGIDLKMMNLGGGFPAKYRTDIPAVERYADAVM 179

Query: 220 EFSEKYS----VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--------A 267
                +       + +EPG ++V +   L   V+ IS+   +  +    ++         
Sbjct: 180 HAMTNHFGNALPAMIIEPGRSLVGDAGVLEAEVVLISKKSYDEDVRWVYLDIGKFGGLAE 239

Query: 268 HVPDYLLYQESATIYPNTGPYTAMVCGRSC 297
            + + + Y+   ++       +      +C
Sbjct: 240 TMDEAIKYRIQTSVTGRKPAPSCWAV-PTC 268


>gi|28198049|ref|NP_778363.1| arginine decarboxylase [Xylella fastidiosa Temecula1]
 gi|182680677|ref|YP_001828837.1| arginine decarboxylase [Xylella fastidiosa M23]
 gi|48474405|sp|Q87F25|SPEA_XYLFT RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|226734335|sp|B2I6M1|SPEA_XYLF2 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|28056109|gb|AAO28012.1| biosynthetic arginine decarboxylase [Xylella fastidiosa Temecula1]
 gi|182630787|gb|ACB91563.1| arginine decarboxylase [Xylella fastidiosa M23]
 gi|307579138|gb|ADN63107.1| arginine decarboxylase [Xylella fastidiosa subsp. fastidiosa GB514]
          Length = 628

 Score = 66.3 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 53/364 (14%), Positives = 98/364 (26%), Gaps = 54/364 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53
           P  L     L + L         A        G   +  +K     G+   L  +     
Sbjct: 59  PLLLRFPDILGHRLGKLQAAFAQAQSEWEYAGGYTAVYPIKVNQHRGVAGVLASHQGDGF 118

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKF 107
           G  + S  E+M                YKD E   +            I+    S+L   
Sbjct: 119 GLEAGSKPELMAVLALSRPGGLIVCNGYKDREYIRLALIGRKLGLKTFIVIEKPSELRMV 178

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158
            ++A+ L    GL +   ++         +     + G   +  ++             +
Sbjct: 179 LEEAKTLDVLPGLGVRVRLASLGAGKWQNSGGDKAKFGLSPRQVLDVWKVLRGTEYADCL 238

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC 215
           N + FH   +  +    +  ++   + F        +I  + +GGG+    +    +  C
Sbjct: 239 NVMHFHMGSQISNVRDIAKGMREATRYFVELSRLGAKITHVDVGGGLGIDYEGTRSRSDC 298

Query: 216 QR--------------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
                           L    E Y     +I  E G A+  +   L   V ++    +  
Sbjct: 299 SINYGLQAYASHIVQPLASACEDYDLVPPRIVTECGRAMTAHHAVLIANVTEVEAVPEGR 358

Query: 259 VIVDSSVE----AHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313
           V      E     H+ +          I            G   LA    G+       +
Sbjct: 359 VPGVCDDEPAVVRHMREIYGELDARPAIELFYEAQHFHAEG---LAAYTLGQIDLVHRAR 415

Query: 314 IGDR 317
           I D 
Sbjct: 416 IDDL 419


>gi|261823135|ref|YP_003261241.1| arginine decarboxylase [Pectobacterium wasabiae WPP163]
 gi|261607148|gb|ACX89634.1| arginine decarboxylase [Pectobacterium wasabiae WPP163]
          Length = 659

 Score = 66.3 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 79/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A        G  L+  +K      + ++L       G
Sbjct: 88  PALFCFPQILQHRLRSINAAFKQARESFGYEGGYFLVYPIKVNQHRRVIESLANSGEPLG 147

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  LGH          N       I        L +   ++   +S++   
Sbjct: 148 LEAGSKAELMAVLGHAGMTRTVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIRMV 207

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 208 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAAVQVLQLVEMLREAGKLDSL 267

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 268 QLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 327

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  +    G+A   +
Sbjct: 328 S-VNYGLNEYANNVIWGIGDACNEH 351


>gi|71899268|ref|ZP_00681430.1| Arginine decarboxylase [Xylella fastidiosa Ann-1]
 gi|71731001|gb|EAO33070.1| Arginine decarboxylase [Xylella fastidiosa Ann-1]
          Length = 628

 Score = 66.3 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 53/364 (14%), Positives = 98/364 (26%), Gaps = 54/364 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53
           P  L     L + L         A        G   +  +K     G+   L  +     
Sbjct: 59  PLLLRFPDILGHRLGKLQAAFAQAQSEWEYAGGYTAVYPIKVNQHRGVAGVLASHQGDGF 118

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKF 107
           G  + S  E+M                YKD E   +            I+    S+L   
Sbjct: 119 GLEAGSKPELMAVLALSRPGGLIVCNGYKDREYIRLALIGRKLGLKTFIVIEKPSELRMV 178

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158
            ++A+ L    GL +   ++         +     + G   +  ++             +
Sbjct: 179 LEEAKTLDVLPGLGVRVRLASLGAGKWQNSGGDKAKFGLSPRQVLDVWKVLRGTEYADCL 238

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC 215
           N + FH   +  +    +  ++   + F        +I  + +GGG+    +    +  C
Sbjct: 239 NVMHFHMGSQISNVRDIAKGMREATRYFVELSRLGAKITHVDVGGGLGIDYEGTRSRSDC 298

Query: 216 QR--------------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
                           L    E Y     +I  E G A+  +   L   V ++    +  
Sbjct: 299 SINYGLQAYASHIVQPLASACEDYDLVPPRIVTECGRAMTAHHAVLIANVTEVEAVPEGR 358

Query: 259 VIVDSSVE----AHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313
           V      E     H+ +          I            G   LA    G+       +
Sbjct: 359 VPGVCDDEPAVVRHMREIYGELDARPAIELFYEAQHFHAEG---LAAYTLGQIDLVHRAR 415

Query: 314 IGDR 317
           I D 
Sbjct: 416 IDDL 419


>gi|323343815|ref|ZP_08084042.1| arginine 2-monooxygenase [Prevotella oralis ATCC 33269]
 gi|323095634|gb|EFZ38208.1| arginine 2-monooxygenase [Prevotella oralis ATCC 33269]
          Length = 630

 Score = 66.3 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/264 (10%), Positives = 77/264 (29%), Gaps = 28/264 (10%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
           ++D  ++          ++  G K    ++  +K      + + +  +      G  + S
Sbjct: 67  ILD-NRIEKTSSCFQRAKEEYGFKGENFIIYPIKVNQMQPVVEEIISHGRKFNLGLEAGS 125

Query: 60  LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112
             E+          ++      YKD            +     I+   +++L+     ++
Sbjct: 126 KPELHAVIAVQCQSDSLIICNGYKDQSYIELALLAQKMGKRIFIVVEKLNELDIIAKASK 185

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIES--------EIKNVNGLMF 163
           KL+ K  L I   ++ S     + +    S+ G    + +E+           ++  + F
Sbjct: 186 KLNVKPNLGIRIKLASSGSGKWEDSGGDASKFGLTSSELLEALHILDEKGLHDSLKLIHF 245

Query: 164 HNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
           H   +                           ++++  GGG+               +  
Sbjct: 246 HIGSQITKIRRIQTALREAAQFYTNLHKMGYDVDFVDCGGGLGVDYDGTRSSHSESSVNY 305

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTL 244
             ++Y         +A   N  + 
Sbjct: 306 SIQEYVNDCIYTFVDAADKNGISH 329


>gi|71275894|ref|ZP_00652177.1| Arginine decarboxylase [Xylella fastidiosa Dixon]
 gi|170729357|ref|YP_001774790.1| arginine decarboxylase [Xylella fastidiosa M12]
 gi|226734336|sp|B0U1H6|SPEA_XYLFM RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|71163271|gb|EAO12990.1| Arginine decarboxylase [Xylella fastidiosa Dixon]
 gi|167964150|gb|ACA11160.1| biosynthetic arginine decarboxylase [Xylella fastidiosa M12]
          Length = 628

 Score = 66.3 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 52/364 (14%), Positives = 99/364 (27%), Gaps = 54/364 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53
           P  L     L + L         A        G   +  +K     G+   L  +     
Sbjct: 59  PLLLRFPDILRHRLGKLQAAFVQAQSEWEYAGGYTAVYPIKVNQHRGVAGVLASHQGDGF 118

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKF 107
           G  + S  E+M                YKD E   +            I+    S+L   
Sbjct: 119 GLEAGSKPELMAVLALSRQGGLIVCNGYKDREYIRLALIGRKLGLKTFIVIEKPSELRMV 178

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158
            ++A+ L    GL +   ++         +     + G   +  ++             +
Sbjct: 179 LEEAKTLGVLPGLGVRVRLASLGAGKWQNSGGDKAKFGLSPRQVLDVWKVLRGTEYADCL 238

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC 215
           N + FH   +  +    +  ++   + F        +I  + +GGG+    +    +  C
Sbjct: 239 NVMHFHMGSQISNVRDIAKGMREATRYFVELSRLGAKITHVDVGGGLGIDYEGTRSRSDC 298

Query: 216 QR--------------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
                           L    E Y     +I  E G A+  +   L   V ++    +  
Sbjct: 299 SINYGLQAYASHIVQPLASACEDYDLVPPRIVTECGRAMTAHHAVLIANVTEVEAVPEGR 358

Query: 259 ----VIVDSSVEAHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313
                  + +V  H+ +          I            G   LA    G+       +
Sbjct: 359 VPGLCDDEPAVVRHMREIYGELDARPAIELFYEAQHFHAEG---LAAYTLGQIDLVHRAR 415

Query: 314 IGDR 317
           I D 
Sbjct: 416 IDDL 419


>gi|291569782|dbj|BAI92054.1| arginine decarboxylase [Arthrospira platensis NIES-39]
          Length = 653

 Score = 66.3 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 37/313 (11%), Positives = 95/313 (30%), Gaps = 48/313 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIR-------KNAGV-KLLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L + ++                GV + +  +KC     + + L ++     
Sbjct: 82  PLLIRFPDILEDRIERLNACFSKAIARYNYPGVYRGVYPVKCNQERHLIEDLVRFGEPYQ 141

Query: 53  DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLN 105
            G  + S  E+++         +      YKD +                I+   + ++ 
Sbjct: 142 LGLEAGSKPELLIALACLTTPGSLLICNGYKDQKYIETAMLAQRLGRKTIIVMEQLEEVE 201

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK-------- 156
                +Q L  +  L +   +          +     + G    + I+   +        
Sbjct: 202 LAIAASQNLGIQPTLGVRAKLGSRGVGRWGGSTGDRAKFGLTIPEIIQVCDRLQGLGMLD 261

Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTD------- 206
            +  L FH   +  S       ++   +   E       ++++ +GGG+           
Sbjct: 262 CLQLLHFHIGSQISSISAIKDAIREASQIYVELAKLGANMQYLDVGGGLGVDYDGSKSNA 321

Query: 207 ---KDYPVKDFCQRLKEFSEK-------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
              K+Y ++++   +    ++        +  +  E G AI ++ + L   +L  SE   
Sbjct: 322 PASKNYNMQNYANDIVAEVKEACEEGKVNAPVLISESGRAIASHQSILVFDILGSSEPTA 381

Query: 257 NLVIVDSSVEAHV 269
                 +  +  +
Sbjct: 382 ENPPTINDDDHLI 394


>gi|284052140|ref|ZP_06382350.1| arginine decarboxylase [Arthrospira platensis str. Paraca]
          Length = 653

 Score = 66.3 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 37/313 (11%), Positives = 95/313 (30%), Gaps = 48/313 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIR-------KNAGV-KLLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L + ++                GV + +  +KC     + + L ++     
Sbjct: 82  PLLIRFPDILEDRIERLNACFSKAIARYNYPGVYRGVYPVKCNQERHLIEDLVRFGEPYQ 141

Query: 53  DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLN 105
            G  + S  E+++         +      YKD +                I+   + ++ 
Sbjct: 142 LGLEAGSKPELLIALACLTTPGSLLICNGYKDQKYIETAMLAQRLGRKTIIVMEQLEEVE 201

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK-------- 156
                +Q L  +  L +   +          +     + G    + I+   +        
Sbjct: 202 LAIAASQNLGIQPTLGVRAKLGSRGVGRWGGSTGDRAKFGLTIPEIIQVCDRLQGLGMLD 261

Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTD------- 206
            +  L FH   +  S       ++   +   E       ++++ +GGG+           
Sbjct: 262 CLQLLHFHIGSQISSISAIKDAIREASQIYVELAKLGANMQYLDVGGGLGVDYDGSKSNA 321

Query: 207 ---KDYPVKDFCQRLKEFSEK-------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
              K+Y ++++   +    ++        +  +  E G AI ++ + L   +L  SE   
Sbjct: 322 PASKNYNMQNYANDIVAEVKEACEEGKVNAPVLISESGRAIASHQSILVFDILGSSEPTA 381

Query: 257 NLVIVDSSVEAHV 269
                 +  +  +
Sbjct: 382 ENPPTINDDDHLI 394


>gi|125582123|gb|EAZ23054.1| hypothetical protein OsJ_06749 [Oryza sativa Japonica Group]
          Length = 450

 Score = 66.3 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 21/52 (40%)

Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
             + + V G +  + D     +    +  GD + F+DV  Y     + FNG 
Sbjct: 386 KTHPSTVFGPTLDSFDEVVRGYQLPELCTGDWLVFDDVGAYTTVCSSDFNGF 437



 Score = 40.9 bits (94), Expect = 0.29,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 19/54 (35%), Gaps = 2/54 (3%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           + +ID  ++           +  GV+   A+KC     +   L     G   +S
Sbjct: 63  FNVIDLGEVARLFAAWWRGLR--GVRPYYAVKCNPNPALLGALAGLGAGFDCAS 114


>gi|12711388|emb|CAC28533.1| ornithine decarboxylase [Platichthys flesus]
          Length = 116

 Score = 66.3 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 29/83 (34%), Gaps = 4/83 (4%)

Query: 250 DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFE 309
            +++ +           AH    L  +           Y   + G +C   D   E  + 
Sbjct: 38  YVNDGVYGSFNCILYDHAHCLPVLHKKPKPDEIM----YPCSIWGPTCDGLDRIVEQCYL 93

Query: 310 KPVKIGDRISFEDVAGYNINRKN 332
             +++GD + FE++  Y +   +
Sbjct: 94  PDMQVGDWLVFENMGAYTVAASS 116


>gi|148263056|ref|YP_001229762.1| arginine decarboxylase [Geobacter uraniireducens Rf4]
 gi|189046764|sp|A5GB52|SPEA_GEOUR RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|146396556|gb|ABQ25189.1| arginine decarboxylase [Geobacter uraniireducens Rf4]
          Length = 635

 Score = 66.3 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 46/297 (15%), Positives = 85/297 (28%), Gaps = 48/297 (16%)

Query: 12  QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
             L   + +   + KNA          +    +K      + + +  +      G    S
Sbjct: 67  DVLQGRIASINRVFKNAIQENNYPAKYQTFYPIKVNQQRQVVEAIANFGKRYNIGLEVGS 126

Query: 60  LYEVMLGHE-KFGGETHAYNVAYKDCEIDAV------LSNCDTIIFNTVSQLNKFKDKAQ 112
             E++ G     G         YKD E   +      +    T++   + +L K  +  +
Sbjct: 127 KPELVAGISFATGNNLPIICNGYKDTEYIEMVLSATKIGYDITLVVEKLFELEKIIELVK 186

Query: 113 KLHKKIGLRINPSVSYSKFILA-DPNRPFSRLGEKCKDKI--------ESEIKNVNGLMF 163
           K   +  L I   +S              ++ G +  + I           IK V  L F
Sbjct: 187 KTGVQPKLGIRVKLSSKGIGKWATSGGEDAKFGLRMSEIIAAIEMLEKHDLIKCVKLLHF 246

Query: 164 HNNCENKSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDK------------- 207
           H   +          L    + +         IE++ +GGG+                  
Sbjct: 247 HIGSQITKIDKIKTALIEGARIYAEMRKLGVGIEYLDIGGGLGVDYDGSKSSNFSSVNYS 306

Query: 208 ----DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI 260
                  V    + + E +      I  E G A V + + L T VL+ +        
Sbjct: 307 IEEYANDVIYQIKNICEDAGVECPNIISESGRATVAHYSVLVTNVLNTNTQNIMPDF 363


>gi|157372207|ref|YP_001480196.1| arginine decarboxylase [Serratia proteamaculans 568]
 gi|157323971|gb|ABV43068.1| arginine decarboxylase [Serratia proteamaculans 568]
          Length = 658

 Score = 66.3 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 79/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A        G  L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINAAFKRARESFGYEGGYFLVYPIKVNQHRRVIESLVNSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        L +   ++   +S++N  
Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEINMV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 207 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAAIQVLKLVETLREAGRLDSL 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 267 QLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  +    G+A   +
Sbjct: 327 S-VNYGLNEYANNVIWGIGDACNEH 350


>gi|116074087|ref|ZP_01471349.1| arginine decarboxylase [Synechococcus sp. RS9916]
 gi|116069392|gb|EAU75144.1| arginine decarboxylase [Synechococcus sp. RS9916]
          Length = 659

 Score = 66.3 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 33/275 (12%), Positives = 77/275 (28%), Gaps = 32/275 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L + L++     + A          + +  +KC     + + L        
Sbjct: 80  PLLIRFDDILEDRLESLHAAFERAITRYGYSGRYQGVFPVKCNQQRHVVEELVSCGRRWH 139

Query: 53  DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105
            G  + S  E+++        E       YKD            +      +     ++ 
Sbjct: 140 FGLEAGSKAELLIALSLIDDPEALLICNGYKDQRYIETAILARRLGRRPVVVIEQADEVQ 199

Query: 106 KFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKIES--------EIK 156
           +  D +++L     + I   +S              ++ G    + + +         ++
Sbjct: 200 RIIDASKELGAAPLIGIRARLSSRSTGRWGSSVGEKAKFGLPVPEILSTVEALREAGLLE 259

Query: 157 NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213
            +  L FH   +          L+    I  E       + ++ +GGG+           
Sbjct: 260 ELRLLHFHVGSQINDIAVVKDALQEASRIYVELHKLGAPMGYLDVGGGLGIDYDG-SRTA 318

Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248
                    + Y+  +     E    +  T+ T V
Sbjct: 319 TAASTNYSLQNYANDVVATVKEGCEPHGVTVPTLV 353


>gi|293394544|ref|ZP_06638840.1| arginine 2-monooxygenase [Serratia odorifera DSM 4582]
 gi|291423009|gb|EFE96242.1| arginine 2-monooxygenase [Serratia odorifera DSM 4582]
          Length = 658

 Score = 65.9 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 79/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A        G  L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINAAFKRARESFGYEGGYFLVYPIKVNQHRRVIESLVNSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        L +   ++   +S++N  
Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEINLV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 207 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAAVQVLKLVETLREAGRLDSL 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 267 QLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  +    G+A   +
Sbjct: 327 S-VNYGLNEYANNVIWGIGDACNEH 350


>gi|70953366|ref|XP_745789.1| S-adenosylmethionine decarboxylase-ornithine decarboxylase
           [Plasmodium chabaudi chabaudi]
 gi|56526220|emb|CAH78210.1| S-adenosylmethionine decarboxylase-ornithine decarboxylase,
           putative [Plasmodium chabaudi chabaudi]
          Length = 923

 Score = 65.9 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 47/278 (16%), Positives = 80/278 (28%), Gaps = 14/278 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I T    I+ QK+L              V    A+K      +   L         +S+ 
Sbjct: 391 IDTSVVCINLQKVLLQYIRFKRNLPR--VTPFFAVKSNDDENVIKFLYGLNCNFDCASIG 448

Query: 62  EVMLGHEKFGG---ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-QKLHKK 117
           E+      F     +   Y    K           + I   T   +++ K          
Sbjct: 449 EINKLTTLFPNMSRDRIIYANTIKSPSSLKYAKEKN-INLCTFDNIDELKKICKYHPTCS 507

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
           + LRIN      K  ++          EK     +    N+ G+ FH     K+   F  
Sbjct: 508 LLLRINIDFKNYKSYMSSKYGANEFEWEKILKFGKENNLNIVGVSFHVGSNTKNSFDFCQ 567

Query: 178 MLKNIEKEFG---HFITQIEWISLGGGIH----FTDKDYPVKDFCQRLKEFSEKYSVQIY 230
            +K     F     F  + + +++GGG      +       K     L E   K  +  +
Sbjct: 568 AIKLSRDAFDLGSRFGFKFQILNIGGGYPEELEYDRARKNEKKHYCTLNEEELKKEIISF 627

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH 268
           L    AI  N    N   + ++ N+          +  
Sbjct: 628 LNDKSAIKKNYNFHNFEKIALAINMSIDHYFKDMKDQL 665



 Score = 56.3 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 18/46 (39%)

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
           + G+SC   D+     +     I D I +E    Y     + FNG 
Sbjct: 860 IYGQSCDGLDMITSSTYLPECNINDWIIYEYSGAYTFVSASGFNGF 905


>gi|50122838|ref|YP_052005.1| arginine decarboxylase [Pectobacterium atrosepticum SCRI1043]
 gi|49613364|emb|CAG76815.1| biosynthetic arginine decarboxylase [Pectobacterium atrosepticum
           SCRI1043]
          Length = 659

 Score = 65.9 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 79/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A        G  L+  +K      + ++L       G
Sbjct: 88  PALFCFPQILQHRLRSINAAFKQARESFGYEGGYFLVYPIKVNQHRRVIESLANSGEPLG 147

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  LGH          N       I        L +   ++   +S++   
Sbjct: 148 LEAGSKAELMAVLGHAGMTRTVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIRLV 207

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 208 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAAIQVLQLVEMLREAGKLESL 267

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 268 QLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 327

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  +    G+A   +
Sbjct: 328 S-VNYGLNEYANNVIWGIGDACNEH 351


>gi|227326184|ref|ZP_03830208.1| arginine decarboxylase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 660

 Score = 65.9 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 79/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A        G  L+  +K      + ++L       G
Sbjct: 88  PALFCFPQILQHRLRSINAAFKQARESFGYEGGYFLVYPIKVNQHRRVIESLANSGEPLG 147

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  LGH          N       I        L +   ++   +S++   
Sbjct: 148 LEAGSKAELMAVLGHAGMTRTVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIRLV 207

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 208 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAAIQVLQLVEMLREAGRLDSL 267

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 268 QLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 327

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  +    G+A   +
Sbjct: 328 S-VNYGLNEYANNVIWGIGDACNEH 351


>gi|332829146|gb|EGK01810.1| biosynthetic arginine decarboxylase [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 630

 Score = 65.9 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 30/267 (11%), Positives = 71/267 (26%), Gaps = 31/267 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L N ++      K         A   ++  +K      + + L  +     
Sbjct: 59  PVLIRFPDILDNRIEKISTCFKLAAEEYEYKAQNHIIYPIKVNQMRPVVEELISHGKKFN 118

Query: 53  DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA 111
            G  + S  E+          ++      YKD     +      +       + K  +  
Sbjct: 119 IGLEAGSKPELHAVIAINTDSDSLIICNGYKDESYIELALLAQKMGKRIFIVVEKLNELP 178

Query: 112 QKLHKKIGLRINPSV-------SYSKFILADPNRPFSRLGEKCKDKIESE--------IK 156
                   L+I P++       S       +     S+ G    + +E+          +
Sbjct: 179 LIAKVAKRLKIRPNIGIRIKLASSGSGKWEESGGDGSKFGLNSSELLEALAYLEKNNMQE 238

Query: 157 NVNGLMFHNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213
           ++  + FH   +                   +      ++E++ +GGG+           
Sbjct: 239 SLRLIHFHIGSQITKIRRIKTALREAAQFYVQLHTMGFKVEFVDIGGGLGVDYDGTRSSY 298

Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTN 240
               +    ++Y         +A   N
Sbjct: 299 NESSVNYSIQEYVNDSIATMVDAANKN 325


>gi|78222124|ref|YP_383871.1| arginine decarboxylase [Geobacter metallireducens GS-15]
 gi|123572446|sp|Q39X78|SPEA_GEOMG RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|78193379|gb|ABB31146.1| arginine decarboxylase [Geobacter metallireducens GS-15]
          Length = 635

 Score = 65.9 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 37/297 (12%), Positives = 89/297 (29%), Gaps = 38/297 (12%)

Query: 12  QKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
             L   +       K         +  +    +K      + + + ++      G    S
Sbjct: 67  DVLQGRIAAINRAFKYAIDENDYPSTYQTFYPIKVNQQRQVVEAIAKFGKRYNIGIEVGS 126

Query: 60  LYEVMLGHEKFGGETH-AYNVAYKDCEIDAV------LSNCDTIIFNTVSQLNKFKDKAQ 112
             E+++G     G         YKD E          +    TI+   + +L K    ++
Sbjct: 127 KPELVIGISFATGNGIPIICNGYKDKEYIETVLYATKIGYDITIVVEKMFELEKIIALSK 186

Query: 113 KLHKKIGLRINPSVSYSKFILA-DPNRPFSRLGEKCKDKIES--------EIKNVNGLMF 163
           K   K  L I   +S              ++ G +  + I +         + +V  + F
Sbjct: 187 KTGIKPKLGIRVKLSSKGTGKWATSGGEDAKFGLRMSEIIAAIGLLEQNELLDSVKLIHF 246

Query: 164 HNNCENKSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
           H   +        + L    + +         IE++ +GGG+           +   +  
Sbjct: 247 HIGSQITKIDKIKSALIEGTRVYAEMRKLGVGIEYVDIGGGLGVDYDG-SKSSYFSSVNY 305

Query: 221 FSEKYSVQIYLEPGEAI------VTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPD 271
             E+Y+  +  +             N  + +        ++    +++++ +  +PD
Sbjct: 306 SIEEYANDVIYQIKNICEDAGVECPNIISESGRATAAHYSVLVTNLLNTNTQNLMPD 362


>gi|224825180|ref|ZP_03698286.1| arginine decarboxylase [Lutiella nitroferrum 2002]
 gi|224602851|gb|EEG09028.1| arginine decarboxylase [Lutiella nitroferrum 2002]
          Length = 629

 Score = 65.9 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 42/294 (14%), Positives = 88/294 (29%), Gaps = 47/294 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKL--------LLALKCFAAWGMFDTL---NQYMD 53
           P  +     L + +         A   +        L  +K      +  ++   +    
Sbjct: 60  PLLVRFPDILQDRVTRLCGAFDKAIADVGYGSQYTALYPIKVNQQEAVIKSIIATSSVSI 119

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEI------DAVLSNCDTIIFNTVSQLNKF 107
           G  + S  E+M                YKD +          L +   I+     +++  
Sbjct: 120 GLEAGSKPELMAVLALAPKGCTITCNGYKDRDFVRLALIGQKLGHRVFIVIEKEVEVDLV 179

Query: 108 KDKAQKLHKKIGLRINPSVSY--SKFILADPNRPFSRLGEKCKDKIES--------EIKN 157
            ++AQKL  +  + +   +S   S    AD      + G      I+             
Sbjct: 180 IEEAQKLGVRPLVGVRVRLSSLNSDNQWADTGGEKGKFGLSASQLIDVAGKMDAAGMADC 239

Query: 158 VNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK------- 207
           V  L FH   +  +   +    +   + FG        I+ + +GGG+            
Sbjct: 240 VRLLHFHMGSQIANIADYRLGFREAIRYFGELRDLGLPIDHVDVGGGLGVDYDGTHSRNA 299

Query: 208 ---DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDI 251
              +Y ++++   +     ++         +I  E G A+  +   L   V D+
Sbjct: 300 SSINYDMEEYAHVIVSMLAEFCDENGLPHPRIMSESGRAMTAHHAVLIMNVTDV 353


>gi|157266135|gb|ABV26057.1| ODC [Paracoccidioides brasiliensis]
 gi|157266137|gb|ABV26058.1| ODC [Paracoccidioides brasiliensis]
 gi|157266139|gb|ABV26059.1| ODC [Paracoccidioides brasiliensis]
 gi|157266141|gb|ABV26060.1| ODC [Paracoccidioides brasiliensis]
 gi|157266143|gb|ABV26061.1| ODC [Paracoccidioides brasiliensis]
 gi|157266145|gb|ABV26062.1| ODC [Paracoccidioides brasiliensis]
 gi|157266149|gb|ABV26064.1| ODC [Paracoccidioides brasiliensis]
 gi|157266151|gb|ABV26065.1| ODC [Paracoccidioides brasiliensis]
 gi|157266153|gb|ABV26066.1| ODC [Paracoccidioides brasiliensis]
 gi|157266155|gb|ABV26067.1| ODC [Paracoccidioides brasiliensis]
 gi|157266157|gb|ABV26068.1| ODC [Paracoccidioides brasiliensis]
 gi|157266159|gb|ABV26069.1| ODC [Paracoccidioides brasiliensis]
 gi|157266161|gb|ABV26070.1| ODC [Paracoccidioides brasiliensis]
 gi|157266163|gb|ABV26071.1| ODC [Paracoccidioides brasiliensis]
 gi|157266165|gb|ABV26072.1| ODC [Paracoccidioides brasiliensis]
 gi|157266167|gb|ABV26073.1| ODC [Paracoccidioides brasiliensis]
 gi|157266169|gb|ABV26074.1| ODC [Paracoccidioides brasiliensis]
 gi|157266171|gb|ABV26075.1| ODC [Paracoccidioides brasiliensis]
 gi|157266173|gb|ABV26076.1| ODC [Paracoccidioides brasiliensis]
 gi|157266175|gb|ABV26077.1| ODC [Paracoccidioides brasiliensis]
          Length = 88

 Score = 65.9 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 21/53 (39%), Gaps = 1/53 (1%)

Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGI 337
            P    + G +C   D+  E       + +G+ + FE++  Y       FNG 
Sbjct: 11  APIEYSIWGPTCDGIDLICERIALPGALDVGNWLYFENMGAYTKCSATRFNGF 63


>gi|5070268|gb|AAD39097.1|AF112367_1 S-adenosylmethionine decarboxylase-ornithine decarboxylase
            [Plasmodium falciparum]
          Length = 1419

 Score = 65.9 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 58/219 (26%), Gaps = 8/219 (3%)

Query: 2    IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            I T    I+ QK+L              V    ++K      +   L         +S+ 
Sbjct: 835  IDTSVVCINLQKILAQYVRFKKNL--PHVTPFYSVKSNNDEVVIKFLYGLNCNFDCASIG 892

Query: 62   EVMLGHEKFGG---ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E+    +       +   +    K           +  +    +     K         +
Sbjct: 893  EISKVIKLLPNLSRDRIIFANTIKSINSLIYARKENINLCTFDNLDELKKIYKYHPKCSL 952

Query: 119  GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
             LRIN      K  ++          E+     +    N+ G+ FH     K+   F   
Sbjct: 953  ILRINVDFKNYKSYMSSKYGANEYEWEEMLLYAKKHNLNIVGVSFHVGSNTKNLFDFCLA 1012

Query: 179  LKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDF 214
            +K     F            I+LGGG     +    K  
Sbjct: 1013 IKLCRDVFDMSSNMGFNFYIINLGGGYPEELEYDNAKKH 1051



 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 30/103 (29%)

Query: 243  TLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDI 302
              +  V D      + +I D      +            + N   Y A V G+SC   D+
Sbjct: 1301 YFSYYVSDSIYGCFSGIIFDEYNRCPIYVIKNKNNPNQNFMNFNLYLANVFGQSCDGLDM 1360

Query: 303  FGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
                 +     I D + +E    Y     + FNG         
Sbjct: 1361 INSITYLPECYINDWLLYEYAGAYTFVSSSNFNGFKKCKKVYI 1403


>gi|253690067|ref|YP_003019257.1| arginine decarboxylase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251756645|gb|ACT14721.1| arginine decarboxylase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 660

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 79/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A        G  L+  +K      + ++L       G
Sbjct: 88  PALFCFPQILQHRLRSINAAFKQARESFGYEGGYFLVYPIKVNQHRRVIESLANSGEPLG 147

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  LGH          N       I        L +   ++   +S++   
Sbjct: 148 LEAGSKAELMAVLGHAGMTRTVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIRLV 207

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 208 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAAIQVLQLVEMLREAGKLDSL 267

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 268 QLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 327

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  +    G+A   +
Sbjct: 328 S-VNYGLNEYANNVIWGIGDACNEH 351


>gi|6002637|gb|AAF00073.1|AF094833_1 S-adenosylmethionine decarboxylase-ornithine decarboxylase
            [Plasmodium falciparum]
          Length = 1419

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 58/219 (26%), Gaps = 8/219 (3%)

Query: 2    IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            I T    I+ QK+L              V    ++K      +   L         +S+ 
Sbjct: 835  IDTSVVCINLQKILAQYVRFKKNL--PHVTPFYSVKSNNDEVVIKFLYGLNCNFDCASIG 892

Query: 62   EVMLGHEKFGG---ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E+    +       +   +    K           +  +    +     K         +
Sbjct: 893  EISKVIKLLPNLSRDRIIFANTIKSINSLIYARKENINLCTFDNLDELKKIYKYHPKCSL 952

Query: 119  GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
             LRIN      K  ++          E+     +    N+ G+ FH     K+   F   
Sbjct: 953  ILRINVDFKNYKSYMSSKYGANEYEWEEMLLYAKKHNLNIVGVSFHVGSNTKNLFDFCLA 1012

Query: 179  LKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDF 214
            +K     F            I+LGGG     +    K  
Sbjct: 1013 IKLCRDVFDMSSNMGFNFYIINLGGGYPEELEYDNAKKH 1051



 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 30/103 (29%)

Query: 243  TLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDI 302
              +  V D      + +I D      +            + N   Y A V G+SC   D+
Sbjct: 1301 YFSYYVSDSIYGCFSGIIFDEYNRCPIYVIKNKNNPNQNFMNFNLYLANVFGQSCDGLDM 1360

Query: 303  FGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
                 +     I D + +E    Y     + FNG         
Sbjct: 1361 INSITYLPECYINDWLLYEYAGAYTFVSSSNFNGFKKCKKVYI 1403


>gi|303238034|ref|ZP_07324577.1| arginine 2-monooxygenase [Prevotella disiens FB035-09AN]
 gi|302481824|gb|EFL44876.1| arginine 2-monooxygenase [Prevotella disiens FB035-09AN]
          Length = 630

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/271 (10%), Positives = 74/271 (27%), Gaps = 31/271 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVK--------LLLALKCFAAWGMFDTLNQYM---- 52
           P  L     L N ++      + A  +        ++  +K      + D +  +     
Sbjct: 59  PVLLRFPDILDNRIEMTSSCFEIAKKEYDYKGENFIIYPIKVNQMQPVVDEIISHGRKFN 118

Query: 53  DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLN 105
            G  + S  E+          ++      YKD            +     I+   +++++
Sbjct: 119 LGLEAGSKPELHAVIAVQCQSDSPIICNGYKDQSYIELALLAQKMGKRIFIVVEKLNEID 178

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIES--------EIK 156
                A+KL+ K  + I   ++ +       +    S+ G    + +++           
Sbjct: 179 IIAKAAKKLNVKPNIGIRIKLASTGSGKWSESGGDASKFGLTASELLQALDILDEKGLHD 238

Query: 157 NVNGLMFHNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213
            +  + FH   +                           ++++  GGG+           
Sbjct: 239 CLRLIHFHIGSQITKIRRIQTALTEAAQYYANLRKMGYNVDFVDCGGGLGIDYDGTRSSS 298

Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTL 244
               +    ++Y         +A   +    
Sbjct: 299 SESSINYTIQEYVNDCVCTFVDASNKHNIPH 329


>gi|283779635|ref|YP_003370390.1| arginine decarboxylase [Pirellula staleyi DSM 6068]
 gi|283438088|gb|ADB16530.1| arginine decarboxylase [Pirellula staleyi DSM 6068]
          Length = 686

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/284 (13%), Positives = 79/284 (27%), Gaps = 43/284 (15%)

Query: 11  KQKLLNNLDTALYIRKNAGVK---LL-LALKCFAAWGMFDTL----NQYMDGTTSSSLYE 62
           K +L    D      +    K   +    +K      + + +     QY  G  + S  E
Sbjct: 121 KDRLREIHDVFAQAIREHDYKGRYICVYPIKVNQQRHVVEQVVQYGKQYGFGLEAGSKPE 180

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
           ++         T      +KD E   +      I  N +  + KF +    L     + +
Sbjct: 181 MLAVVAMTDAVTPIICNGFKDAEFIEMAMLAQKIGRNVIPVVEKFTELDLILKYAEKVGV 240

Query: 123 NPSVSYS-------KFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNC 167
            P +                     S+ G    + +++               L FH   
Sbjct: 241 RPQIGMRIKLAARGSGRWQSSGGWRSKFGLTVGEILQAMEELKKRDMLDCFKLLHFHLGS 300

Query: 168 ENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDK----------DYPVKDF 214
           +  +       +    + +         +E++ +GGG+               +Y ++++
Sbjct: 301 QITNIRHVKGAMTEAARAYADLVKKGAGLEYLDVGGGLGVDYDGSQTNFESSVNYTLQEY 360

Query: 215 CQRLKEFSEK-------YSVQIYLEPGEAIVTNTTTLNTTVLDI 251
              +    +            I  E G A+      L   VL +
Sbjct: 361 ANDVVHHLQTVLDESGVKHPHIISESGRAVAAYHACLIFGVLGV 404


>gi|124802820|ref|XP_001347606.1| S-adenosylmethionine decarboxylase-ornithine decarboxylase
            [Plasmodium falciparum 3D7]
 gi|23495189|gb|AAN35519.1|AE014834_16 S-adenosylmethionine decarboxylase-ornithine decarboxylase
            [Plasmodium falciparum 3D7]
          Length = 1434

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 58/219 (26%), Gaps = 8/219 (3%)

Query: 2    IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
            I T    I+ QK+L              V    ++K      +   L         +S+ 
Sbjct: 847  IDTSVVCINLQKILAQYVRFKKNL--PHVTPFYSVKSNNDEVVIKFLYGLNCNFDCASIG 904

Query: 62   EVMLGHEKFGG---ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E+    +       +   +    K           +  +    +     K         +
Sbjct: 905  EISKVIKLLPNLSRDRIIFANTIKSINSLIYARKENINLCTFDNLDELKKIYKYHPKCSL 964

Query: 119  GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
             LRIN      K  ++          E+     +    N+ G+ FH     K+   F   
Sbjct: 965  ILRINVDFKNYKSYMSSKYGANEYEWEEMLLYAKKHNLNIVGVSFHVGSNTKNLFDFCLA 1024

Query: 179  LKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDF 214
            +K     F            I+LGGG     +    K  
Sbjct: 1025 IKLCRDVFDMSSNMGFNFYIINLGGGYPEELEYDNAKKH 1063



 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 30/103 (29%)

Query: 243  TLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDI 302
              +  V D      + +I D      +            + N   Y A V G+SC   D+
Sbjct: 1316 YFSYYVSDSIYGCFSGIIFDEYNRCPIYVIKNKNNPNQNFMNFNLYLANVFGQSCDGLDM 1375

Query: 303  FGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
                 +     I D + +E    Y     + FNG         
Sbjct: 1376 INSITYLPECYINDWLLYEYAGAYTFVSSSNFNGFKKCKKVYI 1418


>gi|223558062|gb|ACM91067.1| arginine decarboxylase [uncultured bacterium 34R1]
          Length = 606

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/277 (10%), Positives = 75/277 (27%), Gaps = 34/277 (12%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVK--------LLLALKCFAAWGMFDTLNQYM- 52
           I +P  L     L N ++      K A  +        ++  +K      + + +  +  
Sbjct: 26  ITSPILLRFPDILDNRIEKISSCFKKAAKEYEYKAENFVIYPIKVNQMRQVVEEIVGHGK 85

Query: 53  ---DGTTSSSLYEVMLGH----EKFGGETHAYNVAYKDCEI------DAVLSNCDTIIFN 99
               G  + S  E+              +      YKD            +     ++  
Sbjct: 86  KFNIGLEAGSKPELHAVLAINMADISANSLIICNGYKDKGYVELALLAQKMGRRIFLVVE 145

Query: 100 TVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESE---- 154
             ++L    D A++L  +  + +   +S S     + +     + G    +   +     
Sbjct: 146 KPNELKLIADVAKQLGIRPNVGVRIKLSSSGSGKWEESGGDRSKFGLNTSELFTALDFLK 205

Query: 155 ----IKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207
               +  +  + FH   +    +              +       ++++ +GGG+     
Sbjct: 206 ENKMMDCLKLIHFHIGSQVTKIRRIKNALREASQFYVQLTKMGFDLDFVDIGGGLGVDYD 265

Query: 208 DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTL 244
                     +    ++Y         +A   N    
Sbjct: 266 GSRNSASGHSMNYTIQEYVNDAVYTFVDACEKNAIKH 302


>gi|270263004|ref|ZP_06191274.1| biosynthetic arginine decarboxylase [Serratia odorifera 4Rx13]
 gi|270042692|gb|EFA15786.1| biosynthetic arginine decarboxylase [Serratia odorifera 4Rx13]
          Length = 658

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 79/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A        G  L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINAAFKRARESFGYEGGYFLVYPIKVNQHRRVIESLVNSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        L +   ++   +S++N  
Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEINMV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 207 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAAIQVLKLVETLREAGRLDSL 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 267 QLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  +    G+A   +
Sbjct: 327 S-VNYGLNEYANNVIWGIGDACNEH 350


>gi|87123488|ref|ZP_01079339.1| Arginine decarboxylase [Synechococcus sp. RS9917]
 gi|86169208|gb|EAQ70464.1| Arginine decarboxylase [Synechococcus sp. RS9917]
          Length = 650

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/275 (11%), Positives = 73/275 (26%), Gaps = 32/275 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLA--------LKCFAAWGMFDTLNQYM---- 52
           P  +     L + L+      + A  +   A        +KC     + + L        
Sbjct: 71  PLLIRFDDILEDRLERLHGAFERAITRYGYAGRYQGVFPVKCNQQRHVVEELVSCGKRWH 130

Query: 53  DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105
            G  + S  E+++        +       YKD            +      +     ++ 
Sbjct: 131 FGLEAGSKAELLIALSLIDDPDALLICNGYKDQRYIETAILARRLGRRPVVVIEQADEVQ 190

Query: 106 KFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKI--------ESEIK 156
           +    ++ L     + I   +S              ++ G    + +         + ++
Sbjct: 191 RIIAASEALGAAPLIGIRARLSSRSTGRWGSSVGEKAKFGLPVPEILATVEALREANLLE 250

Query: 157 NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213
            +  L FH   +          L+    I  E       + ++ +GGG+           
Sbjct: 251 ELRLLHFHVGSQINDIAVVKDALQEASRIYVELHALGAPMGYMDVGGGLGIDYDG-SRTA 309

Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248
                    + Y+  +     E    +   + T V
Sbjct: 310 TAASTNYSLQNYANDVVATVQEGCAPHGVAVPTLV 344


>gi|71901303|ref|ZP_00683400.1| Orn/DAP/Arg decarboxylase 2 [Xylella fastidiosa Ann-1]
 gi|71728923|gb|EAO31057.1| Orn/DAP/Arg decarboxylase 2 [Xylella fastidiosa Ann-1]
          Length = 444

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 52/364 (14%), Positives = 99/364 (27%), Gaps = 54/364 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY---MD 53
           P  L     L + L         A        G   +  +K     G+   L  +     
Sbjct: 59  PLLLRFPDILRHRLGKLQAAFVQAQSEWEYAGGYTAVYPIKVNQHRGVAGVLASHQGDGF 118

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKF 107
           G  + S  E+M                YKD E   +            I+    S+L   
Sbjct: 119 GLEAGSKPELMAVLALSRQGGLIVCNGYKDREYIRLALIGRKLGLKTFIVIEKPSELRMV 178

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158
            ++A+ L    GL +   ++         +     + G   +  ++             +
Sbjct: 179 LEEAKTLGVLPGLGVRVRLASLGAGKWQNSGGDKAKFGLSPRQVLDVWKVLRGTEYADCL 238

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC 215
           N + FH   +  +    +  ++   + F        +I  + +GGG+    +    +  C
Sbjct: 239 NVMHFHMGSQISNVRDIAKGMREATRYFVELSRLGAKITHVDVGGGLGIDYEGTRSRSDC 298

Query: 216 QR--------------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
                           L    E Y     +I  E G A+  +   L   V ++    +  
Sbjct: 299 SINYGLQAYASHIVQPLASACEDYDLVPPRIVTECGRAMTAHHAVLIANVTEVEAVPEGR 358

Query: 259 ----VIVDSSVEAHVPDYL-LYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313
                  + +V  H+ +          I            G   LA    G+       +
Sbjct: 359 VPGLCDDEPAVVRHMREIYGELDARPAIELFYEAQHFHAEG---LAAYTLGQIDLVHRAR 415

Query: 314 IGDR 317
           I D 
Sbjct: 416 IDDL 419


>gi|212550467|ref|YP_002308784.1| arginine decarboxylase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212548705|dbj|BAG83373.1| arginine decarboxylase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 630

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/313 (10%), Positives = 83/313 (26%), Gaps = 49/313 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVK--------LLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L N ++      K +  +        ++  +K      + + +  +     
Sbjct: 59  PLLVRFPDILDNRIEKISGCFKTSAKEYNYTAQNFIIYPIKVNQMRQVVEEIVNHGKKFN 118

Query: 53  DGTTSSSLYEVMLGHEK--FGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLN 105
            G  + S  E+                N    +  I        +     I+   +++L 
Sbjct: 119 IGLEAGSKPELHAVLAINTCSDSLIVCNGYKDENYIRLALLAQKMGKNIFIVVEKLNELK 178

Query: 106 KFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIES--------EIK 156
              + A+K+     + I     S       +     S+ G    + +E+           
Sbjct: 179 LIAELAKKVKIYPNIGIRIKLASSGSGKWEESGGDGSKFGLSSSELLEAIDFMNKNKLKD 238

Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213
            +  + FH   +    +              +      +IE++ +GGG+           
Sbjct: 239 CLKLIHFHIGSQVTKIRRIKNALREASQFYVQLRSIGYEIEFVDIGGGLGVDYDGTRNDR 298

Query: 214 FCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDISENI 255
               +    ++Y                     I  E G ++  + + L   VL+ +   
Sbjct: 299 SESSMNYSIQEYVNDSISTLVDVCMKNSIPQPNIITECGRSLTAHHSVLIFQVLETAILP 358

Query: 256 KNLVIVDSSVEAH 268
           +           H
Sbjct: 359 EWKEDEKLPKNTH 371


>gi|110637980|ref|YP_678187.1| arginine decarboxylase, biosynthetic [Cytophaga hutchinsonii ATCC
           33406]
 gi|110280661|gb|ABG58847.1| arginine decarboxylase, biosynthetic [Cytophaga hutchinsonii ATCC
           33406]
          Length = 430

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/359 (13%), Positives = 98/359 (27%), Gaps = 44/359 (12%)

Query: 33  LLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGGETHA---YNVAYKDCEIDAV 89
               K      + +   +      +SS Y++ +    F           +       +  
Sbjct: 46  CYCTKSSHFSFVLNEALKNDIHIETSSAYDIPIVRILFENNKITKATNVICNGYKRPEYT 105

Query: 90  LSNCDTIIFNTVSQL-----NKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLG 144
              CD I             ++     + +     L I  +           +R   R  
Sbjct: 106 DYICDLINEGFNCTPILDNLDEITAYEKGIETSCNLGIRLATDEEPKFEFYTSRLGFRYN 165

Query: 145 EKC----KDKIESEIKNVNGLMFHNNCENK---SFLCFSAMLKNIEKEFGHFITQIEWIS 197
           +      +    +    +  L F  N   K    +    +   ++          ++ I 
Sbjct: 166 DVVQFYKEKIEPNPKFKLKMLHFFINTGIKDTTYYWSELSRFVHMYCTMKKINPDMDSID 225

Query: 198 LGGGIHFT---DKDYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTT 247
           +GGG         +Y  K    ++ +  +K           I+ E G   V  +     +
Sbjct: 226 IGGGWPIKTSVHFEYDYKYMADQIVKTIKKVCDEEGVPTPNIFTEFGSFTVGESGAAVYS 285

Query: 248 VLD--ISENIKNLVIVDSSVEAHVPDYLL----YQESATIYPNTGPYTAMVCGRSCLAGD 301
           VL   +  + +   ++DSS    +PD       Y   A    +       + G +C + D
Sbjct: 286 VLGSKLQNDKEEWYMIDSSFITTLPDVWGLSQKYLLLAVNGWDKPYKKVKLGGITCDSMD 345

Query: 302 IFGEF-----HFEKPVKIGD--RISFEDVAGYNINRKNWFNGI-----NMPTIAVKNVD 348
            +         F   +   +   I F     Y  +    + GI       P   + + D
Sbjct: 346 YYNSEAHQNLVFMPELDEKEPTYIGFFHTGAYQESLG-GYGGIQHCLVPAPKHILIDKD 403


>gi|300934298|ref|ZP_07149554.1| decarboxylase [Corynebacterium resistens DSM 45100]
          Length = 1045

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 63/211 (29%), Gaps = 10/211 (4%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
            +P  ++    L  N +  +   +  GV  ++  A K        D       G   +S 
Sbjct: 549 DSPVNVLAPHVLSRNAEDLVRAGQANGVDVRVFYARKANKGLSFVDAALAAGHGVDVASE 608

Query: 61  YEVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
            E+   L       +         D  +   ++    I  ++V++L++ +          
Sbjct: 609 RELQQVLSRGAQPDQVILSAAVKPDRLLQLAVNAGVYISVDSVAELHRIEAIVGDTSGSA 668

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFS 176
            +            L  P R    +    ++        V   G+  H +  +++    +
Sbjct: 669 RVVPRI---APNPNLLPPTRFGELVETWEREVQRDFTPGVEVHGVHLHLHGYSEADRRIA 725

Query: 177 AMLKNIEKEFGH-FITQIEWISLGGGIHFTD 206
                   +        + +I LGGG+  + 
Sbjct: 726 LADAIAIVDAATLAGHPVSFIDLGGGVPMSY 756



 Score = 37.0 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 2/41 (4%)

Query: 290 AMVCGRSCLAGDIFGEF--HFEKPVKIGDRISFEDVAGYNI 328
           A + G  C+  ++      HF + V+ GD I+  + AGY +
Sbjct: 927 AFLVGAYCIEDEVIIRREMHFPEGVESGDIIAIPNTAGYFM 967


>gi|188534945|ref|YP_001908742.1| arginine decarboxylase [Erwinia tasmaniensis Et1/99]
 gi|188029987|emb|CAO97871.1| Biosynthetic arginine decarboxylase [Erwinia tasmaniensis Et1/99]
          Length = 658

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 77/262 (29%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHKRVIESLINSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   ++++   
Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVLEKMTEVKLV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESE--------IKNV 158
            ++A++L+    L I   ++         +     + G      ++          ++++
Sbjct: 207 LEEAERLNVVPRLGIRARLASQGSGKWQSSGGEKSKFGLSATQVLKLVEIMREAGRMESL 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELAKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  +    G A 
Sbjct: 327 S-VNYGLNEYANNVIWAIGAAC 347


>gi|156742443|ref|YP_001432572.1| Orn/DAP/Arg decarboxylase 2 [Roseiflexus castenholzii DSM 13941]
 gi|156233771|gb|ABU58554.1| Orn/DAP/Arg decarboxylase 2 [Roseiflexus castenholzii DSM 13941]
          Length = 528

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/358 (10%), Positives = 88/358 (24%), Gaps = 49/358 (13%)

Query: 16  NNLDTALYIRK----NAGVKLL-LALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH--- 67
             +       +     AG  +   A K   A  +  T         +S+  +V + H   
Sbjct: 65  ERMREWAEAARARSGYAGDFIYAYATKANFAEEVVRTAISSGAHYETSAAADVAIAHYLW 124

Query: 68  --EKFGGETHAYNVAYKDCEIDAVLSNCDT----IIFNTVSQLNKFKDKAQKLHKKIGLR 121
                  +   +    KD    A +          +   +  L++ +       + + L 
Sbjct: 125 QQGVLPSDRFIFCNGSKDHAYIAAIVTLRHAGFARVVPVIDDLDELETLLAMCREPLLLG 184

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDK------IESEIKNVNGLMFHNNCENKSFLCF 175
           +    + +   +  P     R G    +       +      +         + +    +
Sbjct: 185 VRERHTPADVDVNHPGGE--RFGLTPDEIARVVERLHHTPHRLVMYHAMVGSQIEDPERW 242

Query: 176 SAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKDYPV-----------KDFCQRLKEF 221
           +  L    +           +   + GGG+  +                       + + 
Sbjct: 243 NERLARSAEAYARLRQRAPSLWLFNFGGGMPTSAYSLDFRFDYAGFLDRLMTMLAAVCDT 302

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV---PDYLLYQES 278
                  +  E G   V +       V  +               + +   PD L+    
Sbjct: 303 HHIPQPTLVGEFGRYTVASHNVFIMEVGRVKCGQGAAPDWVLLNGSLMVALPDSLIVPGQ 362

Query: 279 ATIY-----PNTGPYTAMVCGR-SCLAGDIFGEFHFEKPVKI----GDRISFEDVAGY 326
             I       +       + GR +C + D F        +      G +I+F  V  Y
Sbjct: 363 EFIILPLDGWDQPVRPVRLAGRLTCDSDDFFPRPGAPPLLLPEPYPGQKIAFFGVGAY 420


>gi|325268245|ref|ZP_08134878.1| arginine 2-monooxygenase [Prevotella multiformis DSM 16608]
 gi|324989387|gb|EGC21337.1| arginine 2-monooxygenase [Prevotella multiformis DSM 16608]
          Length = 671

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/256 (11%), Positives = 75/256 (29%), Gaps = 28/256 (10%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
           ++D  ++          RK  G K    ++  +K      + + +  +      G  + S
Sbjct: 108 ILD-NRIEKTSSCFEKARKEYGFKAENFIIYPIKVNQMQPVVEEIISHGRKFNLGLEAGS 166

Query: 60  LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112
             E+          ++      YKD            +     I+   +++++     A+
Sbjct: 167 KPELHAVIAVQCQSDSLIVCNGYKDQSYIELALLAQKMGKRIFIVVEKLNEIDLIARAAK 226

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIES--------EIKNVNGLMF 163
           KL+ K  L I   ++ S       +    S+ G    + +++            ++ + F
Sbjct: 227 KLNVKPNLGIRIKLASSGSGKWAESGGDASKFGLTSSELLQALETLDGKGLHDCLHLIHF 286

Query: 164 HNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
           H   +                           ++++  GGG+          +    +  
Sbjct: 287 HIGSQITKIRRIQTALNEAAQYYVNLRRMGYGVDFVDCGGGLGVDYDGTRSSNSESSVNY 346

Query: 221 FSEKYSVQIYLEPGEA 236
             ++Y         +A
Sbjct: 347 SIQEYVNDCVYTFVDA 362


>gi|292487093|ref|YP_003529963.1| arginine decarboxylase [Erwinia amylovora CFBP1430]
 gi|292900523|ref|YP_003539892.1| biosynthetic arginine decarboxylase [Erwinia amylovora ATCC 49946]
 gi|291200371|emb|CBJ47499.1| biosynthetic arginine decarboxylase [Erwinia amylovora ATCC 49946]
 gi|291552510|emb|CBA19555.1| arginine decarboxylase [Erwinia amylovora CFBP1430]
 gi|312171197|emb|CBX79456.1| arginine decarboxylase [Erwinia amylovora ATCC BAA-2158]
          Length = 658

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 77/262 (29%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINAAFKRARGSYGYNGDYFLVYPIKVNQHKRVIESLINSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   ++++   
Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVLEKMTEVKLV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESE--------IKNV 158
            ++A++L+    L I   ++         +     + G      ++          ++++
Sbjct: 207 LEEAERLNVVPRLGIRARLASQGSGKWQSSGGEKSKFGLSATQVLQLVDIMRDAGRMESL 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELAKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  +    G A 
Sbjct: 327 S-VNYGLNEYANNVIWAIGAAC 347


>gi|242094536|ref|XP_002437758.1| hypothetical protein SORBIDRAFT_10g002070 [Sorghum bicolor]
 gi|241915981|gb|EER89125.1| hypothetical protein SORBIDRAFT_10g002070 [Sorghum bicolor]
          Length = 701

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/260 (11%), Positives = 72/260 (27%), Gaps = 34/260 (13%)

Query: 12  QKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSS 59
             L + ++T               +  + +  +KC     + + + ++      G  + S
Sbjct: 116 DVLRHRVETLNAAFGYAVRSTGYGSRYQGVYPVKCNQDRYVVEDIVEFGAPFGFGLEAGS 175

Query: 60  LYEVMLGH----EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
             E++L       +   +       YKD    ++     ++  NTV  L + ++    + 
Sbjct: 176 KPELLLAMSCLAARGNPDALLICNGYKDDGYVSLALMARSMGLNTVIVLEQEEELDIVVE 235

Query: 116 KKIGLRINPSVSY-------SKFILADPNRPFSRLGEKCKDKI--------ESEIKNVNG 160
               L + P V                 +    + G      +         + +  +  
Sbjct: 236 ASRRLGVRPVVGMRAKLRTKHAGHFGSTSGEKGKFGLNAAQILSVVTKLKAIAMLDCLQL 295

Query: 161 LMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR 217
           L FH   +  +             I  E       +  I +GGG+               
Sbjct: 296 LHFHIGSQIPTTALLSDGVGEAAQIYCELARLGADMRVIDVGGGLGIDYDGTHSAQTDMS 355

Query: 218 LKEFSEKYSVQIYLEPGEAI 237
           +    E+Y+  +    G   
Sbjct: 356 VAYSLEEYATAVVAAVGRVC 375


>gi|313205307|ref|YP_004043964.1| orn/dap/arg decarboxylase 2 [Paludibacter propionicigenes WB4]
 gi|312444623|gb|ADQ80979.1| Orn/DAP/Arg decarboxylase 2 [Paludibacter propionicigenes WB4]
          Length = 463

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 63/402 (15%), Positives = 124/402 (30%), Gaps = 57/402 (14%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKL--------LLALKCFAAWGMFDTLNQYMDG 54
            TP  +    K+  N+  A  +   A  K+            K      + + + ++   
Sbjct: 42  GTPLRISYLPKIAQNIQKARRMFNVAMAKVDYNGDYNYCYCTKSSHFSFVMEEVLKHGVH 101

Query: 55  TTSSS-----LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL--NKF 107
             +SS     + E +   +    +T      +K  +    + N   + F  V  +  NKF
Sbjct: 102 LETSSAFDINIMESLYEQDLLKTDTFVICNGFKRPQYVENIQNLMRLGFTNVIPILDNKF 161

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV--------N 159
           +         I   +   ++  +    D     SRLG +  D I    K++         
Sbjct: 162 ELDLFLKDFDIKFNVGIRIAAEEEPKFDF--YTSRLGIRYNDIIPYYTKHIANNPQVELK 219

Query: 160 GLMFHNNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIH---FTDKDYPVKD 213
            L F  N   K    +   L        E      Q++ +++GGG       D  Y  + 
Sbjct: 220 MLHFFINTGVKDTAYYWNELNKAVNLYCELKKKCPQLDSLNIGGGFPIQTHLDMVYDYEY 279

Query: 214 FCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSS 264
             + +    +            I+ E G   V  +  +  ++++  +        ++DSS
Sbjct: 280 MAEEIVAQIKTICTQNGVPEPHIFTEFGSYTVGESGAMLYSIVNQKKQNDRELWNMIDSS 339

Query: 265 VEAHVPDYLL----YQESATIYPNTGPYTAMVCGRSCLAGDIF-----GEFHFEKPVKIG 315
               +PD       Y   A    ++      + G +C + D +         F   +   
Sbjct: 340 FMTTLPDTWAINQRYVFLAINNWDSEYERVNLGGLTCDSEDFYNAEVHSNAVFLPKMHED 399

Query: 316 --DRISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDGT 350
               I F     Y  +  + F G     I  P + + + D  
Sbjct: 400 REQYIGFFHTGAYQESL-SGFGGIQHCLIPAPKLVIIDQDED 440


>gi|194476838|ref|YP_002049017.1| arginine decarboxylase [Paulinella chromatophora]
 gi|171191845|gb|ACB42807.1| arginine decarboxylase [Paulinella chromatophora]
          Length = 640

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/295 (12%), Positives = 81/295 (27%), Gaps = 48/295 (16%)

Query: 5   PYYLIDKQKLLNNLDT----ALYIRKNAGVKLLL----ALKCFAAWGMFDTLNQYM---- 52
           P  +     L + L+          K             +KC     + + L +      
Sbjct: 67  PLLIHFDDILEHRLNQLNNSFRKAIKKYDYAGCYQGVFPVKCNQQRHLLEHLVESGRSWN 126

Query: 53  DGTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLN 105
            G    S  E+++        +       YKD                  I+     +L 
Sbjct: 127 FGLEVGSKAELLIALSLLDNPKALLICNGYKDQRYIETAILARRLGRQPVIVIEQADELY 186

Query: 106 KFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKIES--------EIK 156
           +    ++ L     + I   +S              ++ G    +   +         + 
Sbjct: 187 RIVAASRILGASPLIGIRAKLSTRSTGRWGSSVGEMAKFGLAIPEIKTAVEKLREANLLN 246

Query: 157 NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK------ 207
           ++  L FH   +          L+    I  +       + ++ +GGG+           
Sbjct: 247 SLCLLHFHIGSQISDIAVLKDALQEAGQIYVQLVQLGAPMGYLDVGGGLGIDYDGSRTAT 306

Query: 208 ----DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDI 251
               +Y ++++   +    ++           I  E G AI ++ + L   VL +
Sbjct: 307 AASTNYSLQNYANDVVATVKECCLSHSIKLPTIITESGRAIASHCSVLIFNVLGV 361


>gi|157266147|gb|ABV26063.1| ODC [Paracoccidioides brasiliensis]
          Length = 88

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 21/53 (39%), Gaps = 1/53 (1%)

Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGI 337
            P    + G +C   D+  E       + +G+ + FE++  Y       FNG 
Sbjct: 11  APIEYSIWGPTCDGIDLICERIALPGALDVGNWLYFENMGAYTKCSATRFNGF 63


>gi|42521980|ref|NP_967360.1| arginine decarboxylase [Bdellovibrio bacteriovorus HD100]
 gi|39574510|emb|CAE78014.1| arginine decarboxylase [Bdellovibrio bacteriovorus HD100]
          Length = 662

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/319 (12%), Positives = 94/319 (29%), Gaps = 49/319 (15%)

Query: 5   PYYLIDKQKLLNNLDT----ALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYM---- 52
           P  +   + + + ++           + G K     +  +K      +   L +Y     
Sbjct: 88  PIMIRFPEIIKSRVELLNGCFQKAFADHGYKGQYRGVYPIKVNQQRHLVQELVKYGKDYS 147

Query: 53  DGTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLN 105
            G  + S  E+++        +       +KD E                I+ +   +L 
Sbjct: 148 MGLEAGSKPELLVVLALMNTPDALIICNGFKDWEYIETAILSQKLGRNTIIVVDRKEELK 207

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILA-DPNRPFSRLGEKCKDKIESEIK-------- 156
              D A+K + +  +     ++        D +   S+ G    + +E            
Sbjct: 208 MIVDVAKKFNARPKIGFRAKLNTQGAGKWVDSSGARSKFGLTSTEIVEGVEFLKNEGMLD 267

Query: 157 NVNGLMFHNNC---ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD------- 206
            +  L +H      + +S             E       +++I +GGG+           
Sbjct: 268 CLELLHYHIGSQVPQIQSIKSSLKEGARFYTELYKMGAGLKYIDVGGGLGVDYDGSGHSD 327

Query: 207 ------KDYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKN 257
                 +     D    L+   ++       I  E G  +V + + L   V+ +++  ++
Sbjct: 328 SSVNYSEQEYANDIVSVLQTLCDEKGIPHPNIVTESGRFLVAHHSVLVFNVMGVNDLHRH 387

Query: 258 LVIVDSSVEAH--VPDYLL 274
                ++   H  + D   
Sbjct: 388 EPPRPATKTDHSIMQDMQY 406


>gi|310766494|gb|ADP11444.1| arginine decarboxylase [Erwinia sp. Ejp617]
          Length = 658

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 77/262 (29%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHKRVIESLINSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   ++++   
Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVLEKMTEVKLV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESE--------IKNV 158
            ++A++L+    L I   ++         +     + G      ++          ++++
Sbjct: 207 LEEAERLNVVPRLGIRARLASQGSGKWQSSGGEKSKFGLSATQVLKLVEIMRDAGRMESL 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELAKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  +    G A 
Sbjct: 327 S-VNYGLNEYANNVIWAIGAAC 347


>gi|298488969|ref|ZP_07006992.1| Biosynthetic arginine decarboxylase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298156467|gb|EFH97564.1| Biosynthetic arginine decarboxylase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 637

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/298 (12%), Positives = 80/298 (26%), Gaps = 46/298 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53
           P  +     L + +                 +    L  +K      + +  +       
Sbjct: 70  PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106
           G  + S  E+M                YKD E   +      +  N    + K       
Sbjct: 130 GLEAGSKPELMAVLALAPKSGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189

Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158
            ++ A+              S +    AD     S+ G      +            + +
Sbjct: 190 IEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRKAGLDQGI 249

Query: 159 NGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK-------- 207
             L FH   +  +   +    K       E       +++I +GGG+             
Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRKLGLPVDYIDVGGGLGVDYDGTHSRNAS 309

Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
             +Y + D+   +    +++          I+ E G ++  +   L   V D+ ++  
Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHND 367


>gi|56377973|dbj|BAD74164.1| ornithine decarboxylase [Malus x domestica]
          Length = 173

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/174 (12%), Positives = 46/174 (26%), Gaps = 8/174 (4%)

Query: 34  LALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSN 92
            A+KC         L         +S  E+              Y    K        + 
Sbjct: 1   YAVKCNPEPAFIAALATLGASFDCASKVEIEAILSHGVSPSRIVYANPCKGENHLRHAAG 60

Query: 93  CD--TIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK 150
                  F+++ +LNK K    K    + + +    S  +            +    +  
Sbjct: 61  VGVNLATFDSMDELNKIKRCHPKCSLLLRIAVPNDTSSWRSFGTKFGALSEEVAPLLRHA 120

Query: 151 IESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGG 200
                  V G+ FH   +      +   +   +  F       + ++  + +GG
Sbjct: 121 -HKLGLRVVGVSFHVGSKASESQVYRGAIAAAKAAFDVADELQLPKMHVLDIGG 173


>gi|325859676|ref|ZP_08172806.1| arginine 2-monooxygenase [Prevotella denticola CRIS 18C-A]
 gi|325482602|gb|EGC85605.1| arginine 2-monooxygenase [Prevotella denticola CRIS 18C-A]
          Length = 630

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/256 (11%), Positives = 75/256 (29%), Gaps = 28/256 (10%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
           ++D  ++          RK  G K    ++  +K      + + +  +      G  + S
Sbjct: 67  ILD-NRIEKTSSCFEKARKEYGFKAENFIIYPIKVNQMQPVVEEIISHGRKFNLGLEAGS 125

Query: 60  LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112
             E+          ++      YKD            +     I+   +++++     A+
Sbjct: 126 KPELHAVIAVQCQSDSLIVCNGYKDQSYIELALLAQKMGKRIFIVVEKLNEIDLIARAAK 185

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIES--------EIKNVNGLMF 163
           KL+ K  L I   ++ S       +    S+ G    + +++            ++ + F
Sbjct: 186 KLNVKPNLGIRIKLASSGSGKWAESGGDASKFGLTSSELLQALETLDEKGLHDCLHLIHF 245

Query: 164 HNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
           H   +                           ++++  GGG+          +    +  
Sbjct: 246 HIGSQITKIRRIQTALNEAAQYYVNLRRMGYGVDFVDCGGGLGVDYDGTRSSNSESSVNY 305

Query: 221 FSEKYSVQIYLEPGEA 236
             ++Y         +A
Sbjct: 306 SIQEYVNDCVYTFVDA 321


>gi|22127189|ref|NP_670612.1| arginine decarboxylase [Yersinia pestis KIM 10]
 gi|45443251|ref|NP_994790.1| arginine decarboxylase [Yersinia pestis biovar Microtus str. 91001]
 gi|51597512|ref|YP_071703.1| arginine decarboxylase [Yersinia pseudotuberculosis IP 32953]
 gi|108806333|ref|YP_650249.1| arginine decarboxylase [Yersinia pestis Antiqua]
 gi|108813286|ref|YP_649053.1| arginine decarboxylase [Yersinia pestis Nepal516]
 gi|145597893|ref|YP_001161969.1| arginine decarboxylase [Yersinia pestis Pestoides F]
 gi|149367061|ref|ZP_01889094.1| biosynthetic arginine decarboxylase [Yersinia pestis CA88-4125]
 gi|153949410|ref|YP_001399827.1| arginine decarboxylase [Yersinia pseudotuberculosis IP 31758]
 gi|162420874|ref|YP_001607692.1| arginine decarboxylase [Yersinia pestis Angola]
 gi|165924887|ref|ZP_02220719.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165937215|ref|ZP_02225779.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166010228|ref|ZP_02231126.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166212645|ref|ZP_02238680.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|167399921|ref|ZP_02305439.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167421979|ref|ZP_02313732.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167426717|ref|ZP_02318470.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167470378|ref|ZP_02335082.1| biosynthetic arginine decarboxylase [Yersinia pestis FV-1]
 gi|170023094|ref|YP_001719599.1| arginine decarboxylase [Yersinia pseudotuberculosis YPIII]
 gi|186896633|ref|YP_001873745.1| arginine decarboxylase [Yersinia pseudotuberculosis PB1/+]
 gi|218928102|ref|YP_002345977.1| arginine decarboxylase [Yersinia pestis CO92]
 gi|229837618|ref|ZP_04457780.1| arginine decarboxylase [Yersinia pestis Pestoides A]
 gi|229840845|ref|ZP_04461004.1| arginine decarboxylase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229842595|ref|ZP_04462750.1| arginine decarboxylase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229903746|ref|ZP_04518859.1| arginine decarboxylase [Yersinia pestis Nepal516]
 gi|270487526|ref|ZP_06204600.1| arginine 2-monooxygenase [Yersinia pestis KIM D27]
 gi|294502907|ref|YP_003566969.1| arginine decarboxylase [Yersinia pestis Z176003]
 gi|46397734|sp|Q8ZHG8|SPEA_YERPE RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|21960254|gb|AAM86863.1|AE013932_6 biosynthetic arginine decarboxylase [Yersinia pestis KIM 10]
 gi|45438119|gb|AAS63667.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51590794|emb|CAH22440.1| Biosynthetic arginine decarboxylase [Yersinia pseudotuberculosis IP
           32953]
 gi|108776934|gb|ABG19453.1| arginine decarboxylase [Yersinia pestis Nepal516]
 gi|108778246|gb|ABG12304.1| arginine decarboxylase [Yersinia pestis Antiqua]
 gi|115346713|emb|CAL19596.1| biosynthetic arginine decarboxylase [Yersinia pestis CO92]
 gi|145209589|gb|ABP38996.1| arginine decarboxylase [Yersinia pestis Pestoides F]
 gi|149290675|gb|EDM40751.1| biosynthetic arginine decarboxylase [Yersinia pestis CA88-4125]
 gi|152960905|gb|ABS48366.1| biosynthetic arginine decarboxylase [Yersinia pseudotuberculosis IP
           31758]
 gi|162353689|gb|ABX87637.1| biosynthetic arginine decarboxylase [Yersinia pestis Angola]
 gi|165914689|gb|EDR33302.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165923087|gb|EDR40238.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165990714|gb|EDR43015.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166205937|gb|EDR50417.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|166960116|gb|EDR56137.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167050629|gb|EDR62037.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167054320|gb|EDR64139.1| biosynthetic arginine decarboxylase [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169749628|gb|ACA67146.1| arginine decarboxylase [Yersinia pseudotuberculosis YPIII]
 gi|186699659|gb|ACC90288.1| arginine decarboxylase [Yersinia pseudotuberculosis PB1/+]
 gi|229679516|gb|EEO75619.1| arginine decarboxylase [Yersinia pestis Nepal516]
 gi|229690905|gb|EEO82959.1| arginine decarboxylase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229697211|gb|EEO87258.1| arginine decarboxylase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229704306|gb|EEO91317.1| arginine decarboxylase [Yersinia pestis Pestoides A]
 gi|262360942|gb|ACY57663.1| arginine decarboxylase [Yersinia pestis D106004]
 gi|262364882|gb|ACY61439.1| arginine decarboxylase [Yersinia pestis D182038]
 gi|270336030|gb|EFA46807.1| arginine 2-monooxygenase [Yersinia pestis KIM D27]
 gi|294353366|gb|ADE63707.1| arginine decarboxylase [Yersinia pestis Z176003]
 gi|320013991|gb|ADV97562.1| arginine decarboxylase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 659

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A        G  L+  +K      + ++L       G
Sbjct: 88  PALFCFPQILQHRLRSINAAFKRARESFGYEGGYFLVYPIKVNQHRRVIESLVNSGEPLG 147

Query: 55  TTSSSLYE--VMLGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E   +L H          N       I        L +   ++   +S++   
Sbjct: 148 LEAGSKAEMMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIKMV 207

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 208 LEEAERLNVVPRLGVRARLASQGSGKWQASGGEKSKFGLSATQVLQLVDMLREANSLESL 267

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 268 QLLHFHLGSQLSNIRDISTGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 327

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  +    G+A   +
Sbjct: 328 S-VNYGLNEYANNVIWGIGDACNEH 351


>gi|302185179|ref|ZP_07261852.1| arginine decarboxylase [Pseudomonas syringae pv. syringae 642]
          Length = 637

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/298 (12%), Positives = 80/298 (26%), Gaps = 46/298 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53
           P  +     L + +                 +    L  +K      + +  +       
Sbjct: 70  PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSKYTALYPIKVNQQEAVVENIIATQNVSI 129

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106
           G  + S  E+M                YKD E   +      +  N    + K       
Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189

Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158
            ++ A+              S +    AD     S+ G      +            + +
Sbjct: 190 IEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRKAGLDQGI 249

Query: 159 NGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK-------- 207
             L FH   +  +   +    K       E       +++I +GGG+             
Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRKLGLPVDYIDVGGGLGVDYDGTHSRNAS 309

Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
             +Y + D+   +    +++          I+ E G ++  +   L   V D+ ++  
Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHND 367


>gi|66047608|ref|YP_237449.1| arginine decarboxylase [Pseudomonas syringae pv. syringae B728a]
 gi|63258315|gb|AAY39411.1| Arginine decarboxylase [Pseudomonas syringae pv. syringae B728a]
 gi|330969417|gb|EGH69483.1| arginine decarboxylase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 637

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/298 (12%), Positives = 80/298 (26%), Gaps = 46/298 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53
           P  +     L + +                 +    L  +K      + +  +       
Sbjct: 70  PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSKYTALYPIKVNQQEAVVENIIATQNVSI 129

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106
           G  + S  E+M                YKD E   +      +  N    + K       
Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189

Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158
            ++ A+              S +    AD     S+ G      +            + +
Sbjct: 190 IEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRKAGLDQGI 249

Query: 159 NGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK-------- 207
             L FH   +  +   +    K       E       +++I +GGG+             
Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRKLGLPVDYIDVGGGLGVDYDGTHSRNAS 309

Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
             +Y + D+   +    +++          I+ E G ++  +   L   V D+ ++  
Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHND 367


>gi|90083064|dbj|BAE90614.1| unnamed protein product [Macaca fascicularis]
          Length = 206

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 26/70 (37%)

Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                 +   +T+ + G SC   D   E      + +GD + F+++   + +  + FN  
Sbjct: 119 HKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSFHEPSAFNDF 178

Query: 338 NMPTIAVKNV 347
             P I     
Sbjct: 179 QRPAIYYMMS 188


>gi|167916301|ref|ZP_02503392.1| hypothetical protein Bpse112_37852 [Burkholderia pseudomallei 112]
          Length = 159

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 33/129 (25%), Gaps = 11/129 (8%)

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL------LYQESATI 281
           +I LE G  +V+       +V+D   +     +V      H           + +    +
Sbjct: 31  EIVLELGRYLVSEAGIYVCSVVDRKVSNGVPFLVMDGGMHHHLSASGNLGQLIRRNYPVV 90

Query: 282 YPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNG 336
             N           V G  C   DI          + GD +       Y +      F  
Sbjct: 91  VGNRVVGDERERVNVVGPLCTPLDIIAHQATLATARPGDLLVVFQSGAYGLTASPNGFLS 150

Query: 337 INMPTIAVK 345
                  + 
Sbjct: 151 QPAAREVIV 159


>gi|168003930|ref|XP_001754665.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694286|gb|EDQ80635.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 668

 Score = 65.2 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/270 (11%), Positives = 75/270 (27%), Gaps = 33/270 (12%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLA--------LKCFAAWGMFDTLNQYM---- 52
           P  +     + N +DT          +   +        +KC     + + +  +     
Sbjct: 82  PLIIRFPDIVKNRMDTLQSAFDRGIARHRYSGRFQGVFPVKCNPDRYLIEEIVSHGRYIN 141

Query: 53  DGTTSSSLYEVMLGHEKF---GGETHAYNVAYKDCEIDAV------LSNCDTIIFNTVSQ 103
            G  + S  E++L          +       YKD E   +      +     I+   + +
Sbjct: 142 FGLEAGSKPELLLVMAAMCRASNDAFLICNGYKDVEYVEMALVARTMGLNTMIVLEQLEE 201

Query: 104 LNKFKDKAQKLHKKIGLRINPSVSYSK-FILADPNRPFSRLGEKCKDKIE--------SE 154
           L+     + +L  +  + +   +S        + +    + G    + ++          
Sbjct: 202 LDIVIKVSNQLQIRPVIGVRAKLSTKHAGHWGETSGEKGKFGLSTSEIVQVVKRLRKVDM 261

Query: 155 IKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPV 211
              +  L FH   +  S       +      F         +  I +GGG+         
Sbjct: 262 SDCLQLLHFHIGSQIPSLSIVREGVSEAAHIFCELALMGANMNVIDIGGGLGVDYDGTHS 321

Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
                 +    E+Y+  +     +A V   
Sbjct: 322 SSSDMSIGYNMEEYAETVVEAIKDATVQKN 351


>gi|108759559|ref|YP_630959.1| arginine decarboxylase [Myxococcus xanthus DK 1622]
 gi|108463439|gb|ABF88624.1| arginine decarboxylase [Myxococcus xanthus DK 1622]
          Length = 696

 Score = 65.2 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/264 (12%), Positives = 78/264 (29%), Gaps = 32/264 (12%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L + +       + A        G + +  +K      + +TL +      
Sbjct: 86  PLLIRFTDVLRHRVVHLNEAFRKAMSDQGFKGGYRGVYPIKVNQHRYVVETLIEAGKGYN 145

Query: 53  DGTTSSSLYEVMLGHEKFGGET-HAYNVAYKDCEIDAVLSNC------DTIIFNTVSQLN 105
            G  + S  E++        E        YKD E                ++    S+L 
Sbjct: 146 YGLEAGSKPELLAVMALLENENALVICNGYKDEEYIETALFYSRLGRNVILVVEKPSELP 205

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIK 156
              + A++      L I   +S       + +     + G    + +           + 
Sbjct: 206 LIAEVARRTGIAPRLGIRVKLSTRGAGKWEASGGDRSKFGLTSSELMNCIGFMKDAGLLN 265

Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKD 213
           +   L FH   +  +       L+ +   +         ++++ +GGG+          +
Sbjct: 266 SFELLHFHLGSQISNIRNVKNALREVGCFYVEVARQGAPLKYLDVGGGLGVDYDG-SQTN 324

Query: 214 FCQRLKEFSEKYSVQIYLEPGEAI 237
           F   +   +E+Y+  +     EA 
Sbjct: 325 FASSMNYTTEEYANDVVFGVMEAC 348


>gi|104783785|ref|YP_610283.1| arginine decarboxylase [Pseudomonas entomophila L48]
 gi|95112772|emb|CAK17500.1| arginine decarboxylase, PLP-binding, biosynthetic [Pseudomonas
           entomophila L48]
          Length = 637

 Score = 65.2 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/301 (13%), Positives = 86/301 (28%), Gaps = 46/301 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53
           P  +     L + +                 +    L  +K      + +  +       
Sbjct: 70  PLLVRFPDILQDRVRQLTGAFDANIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
           G  + S  E++                YKD E   +      +  N    + K  + A  
Sbjct: 130 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVALV 189

Query: 114 LHKKIGLRINPSV-------SYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158
           + +   L++ P V       S +    AD     S+ G      I            + +
Sbjct: 190 IEEAAELKVKPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLISVVQRFRDAGLDQGI 249

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207
             L FH   +  +   +    K   + +G        ++ I +GGG+             
Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRALGLPVDHIDVGGGLGVDYDGTHSRNAS 309

Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
             +Y + D+   +    +++          I+ E G ++  +   L   V D+  +   +
Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQGLPHPHIFSESGRSLTAHHAMLVIQVTDVESHNDEM 369

Query: 259 V 259
            
Sbjct: 370 P 370


>gi|330953042|gb|EGH53302.1| arginine decarboxylase [Pseudomonas syringae Cit 7]
          Length = 637

 Score = 65.2 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/298 (12%), Positives = 80/298 (26%), Gaps = 46/298 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53
           P  +     L + +                 +    L  +K      + +  +       
Sbjct: 70  PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSKYTALYPIKVNQQEAVVENIIATQNVSI 129

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106
           G  + S  E+M                YKD E   +      +  N    + K       
Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189

Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158
            ++ A+              S +    AD     S+ G      +            + +
Sbjct: 190 IEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRMAGLDQGI 249

Query: 159 NGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK-------- 207
             L FH   +  +   +    K       E       +++I +GGG+             
Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRKLGLPVDYIDVGGGLGVDYDGTHSRNAS 309

Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
             +Y + D+   +    +++          I+ E G ++  +   L   V D+ ++  
Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHND 367


>gi|302804314|ref|XP_002983909.1| hypothetical protein SELMODRAFT_41652 [Selaginella moellendorffii]
 gi|300148261|gb|EFJ14921.1| hypothetical protein SELMODRAFT_41652 [Selaginella moellendorffii]
          Length = 613

 Score = 65.2 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/268 (10%), Positives = 69/268 (25%), Gaps = 33/268 (12%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52
           P  +   + L   L       + A          + +  +KC     + + +        
Sbjct: 62  PLIIRFPELLGARLRELQSAFQGAIHALGYNNRFQGVFPVKCNPDKLLVEEIVAAGKPFA 121

Query: 53  DGTTSSSLYEVML---GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109
            G  + S  E++L      K   +       YKD E   +     ++  + +  L +  +
Sbjct: 122 FGLEAGSKPELLLTMSAMCKAHPDAFLICNGYKDAEYVQLALLARSLGMDCIIVLEQLDE 181

Query: 110 KAQKLHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIESEIK------ 156
               +     L I P+        +       +      + G    + +E   +      
Sbjct: 182 VDLVIEMSQRLGIEPAIGVRSKLHTKHGGHWGETCGEGGKFGLSAPEIVEVARRLRRQGM 241

Query: 157 --NVNGLMFHNNCENKSFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
              +  + FH   +                +  E       +  + +GGG+         
Sbjct: 242 LDCLELVHFHVGSQIPCLSVVKDSVSEAAFLYCELALMGAGMRILDIGGGLGIDYDGSAS 301

Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
                 +     +Y+  +      A   
Sbjct: 302 ASSDMSVGYTVPEYASAVVAAIDAACTM 329


>gi|238754597|ref|ZP_04615951.1| Biosynthetic arginine decarboxylase [Yersinia ruckeri ATCC 29473]
 gi|238707228|gb|EEP99591.1| Biosynthetic arginine decarboxylase [Yersinia ruckeri ATCC 29473]
          Length = 638

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/265 (12%), Positives = 76/265 (28%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 67  PALFCFPQILQHRLRSINAAFKRAREEFGYQGNYFLVYPIKVNQHRRVIESLVNSGEPLG 126

Query: 55  TTSSSLYE--VMLGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E   +L H          N       I        L +   ++   +S++   
Sbjct: 127 LEAGSKAEMMAVLAHAGMTRSVIVCNGYKDREYIRLALTGEKLGHKVYLVIEKMSEIKMV 186

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158
            ++A +L     L +   ++         +     + G      ++         ++ ++
Sbjct: 187 LEEAARLDVVPRLGVRARLASQGSGKWQASGGEKSKFGLSATQVLQLVEMLREADKLDSL 246

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 247 QLLHFHLGSQLSNIRDISTGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 306

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  +    G+A   +
Sbjct: 307 S-VNYGLNEYANNVIWGIGDACNEH 330


>gi|282897114|ref|ZP_06305116.1| Arginine decarboxylase [Raphidiopsis brookii D9]
 gi|281197766|gb|EFA72660.1| Arginine decarboxylase [Raphidiopsis brookii D9]
          Length = 587

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/295 (12%), Positives = 86/295 (29%), Gaps = 48/295 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLA--------LKCFAAWGMFDTLNQYM---- 52
           P  +     L + ++        A  +   +        +KC     + + L ++     
Sbjct: 16  PLLIRFSDILEDRIERLNSCFAKAIARYNYSGVYRGVFPVKCNQERHLIEDLVRFGTPHQ 75

Query: 53  DGTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLN 105
            G  + S  E+M+                YKD E                I+   + +++
Sbjct: 76  FGLEAGSKPELMIALALLDTPGALLVCNGYKDREYIETAMLAQKLGQTPIIVLEQIEEVD 135

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK-------- 156
                + +L  K  L +   +S         +     + G    + +E+  +        
Sbjct: 136 LAIAASDQLGIKPILGVRAKLSTQGMGRWGTSTGDRAKFGLTIPEIMEAVDRLRSANLLD 195

Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD------- 206
            +  L FH   +                I  E       ++++ +GGG+           
Sbjct: 196 CLQLLHFHIGSQISAINVIKDAIQEASRIYVELAMLGADMKFLDVGGGLGVDYDGSQTNF 255

Query: 207 ---KDYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDI 251
              K+Y ++++   +    +            +  E G AI ++ + L   VL  
Sbjct: 256 YASKNYNMQNYANDIVAELKDTCSESKIPVPTLISESGRAIASHQSVLIFDVLST 310


>gi|260599267|ref|YP_003211838.1| arginine decarboxylase [Cronobacter turicensis z3032]
 gi|260218444|emb|CBA33565.1| Biosynthetic arginine decarboxylase [Cronobacter turicensis z3032]
          Length = 654

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/361 (11%), Positives = 90/361 (24%), Gaps = 44/361 (12%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 83  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 142

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 143 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIKIV 202

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 203 LEEAERLNVIPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVEMLREADRLDSL 262

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       IE   +GGG+    +    +  C
Sbjct: 263 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIECFDVGGGLGVDYEGTRSQSDC 322

Query: 216 QRLKEFSEKYSVQIYLEPGEAI------VTNTTTLNTTVLDISENIKNLVIVDSSVEAHV 269
             +     +Y+  I    G+A            T +   +     +    I+      + 
Sbjct: 323 S-VNYGLNEYANNIIWAIGDACEENGLPHPTVITESGRAVTAHHTVLVSNIIGVERNEYT 381

Query: 270 PDY--LLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHF-EKPVKIGDRISFEDVAGY 326
                                     G      +   +       + IG          Y
Sbjct: 382 EPTAPSEDAPRPLQSMWETWQEMHEPGTRRSLREWLHDSQMDLHDIHIG-----YSSGSY 436

Query: 327 N 327
            
Sbjct: 437 T 437


>gi|3283904|gb|AAC25391.1| antizyme inhibitor [Homo sapiens]
          Length = 176

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 26/70 (37%)

Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                 +   +T+ + G SC   D   E      + +GD + F+++   + +  + FN  
Sbjct: 67  HKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSFHEPSAFNDF 126

Query: 338 NMPTIAVKNV 347
             P I     
Sbjct: 127 QRPAIYYMMS 136


>gi|318062629|ref|ZP_07981350.1| diaminopimelate decarboxylase [Streptomyces sp. SA3_actG]
 gi|318079938|ref|ZP_07987270.1| diaminopimelate decarboxylase [Streptomyces sp. SA3_actF]
          Length = 448

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/367 (11%), Positives = 91/367 (24%), Gaps = 32/367 (8%)

Query: 8   LIDKQKLLNNLDTALYIRK------NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           L+D   +                     V+   A++      +   L +   G   +S  
Sbjct: 42  LLDVTGIRRTARALQSAFAPLVAEGGPAVRHTFAVRATPLVPVLRLLYEDRIGAEVASAA 101

Query: 62  EVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           E+ L        G T   +      E+   L +   +  +   +L +      +      
Sbjct: 102 ELALARAAGVQPGHTVLDSPTKTVAELREALGSGVLVDVDDAQELERLDALRGEAAATST 161

Query: 120 LRINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN-------KS 171
             +        +               +      ++   +  L  H+  +N       + 
Sbjct: 162 FGVRVDPHAGAERRAVFGVALGHEGAREWILSAFADRPWLTRLHAHSEVKNAGGVAPERL 221

Query: 172 FLCFSAMLKNIEKEFGHFITQ---------IEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
                 + +  E+       +                 G            +   LKE  
Sbjct: 222 AEGVRKVYELAEEINAAAGRRQVDALALGGGLAAGAREGDTGDGDGADFAGYAALLKETV 281

Query: 223 EKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE---AHVPDYLLYQ 276
                    +    G +++     L   V  +       + V  +      H     L  
Sbjct: 282 PGLFDGRYALVTGFGRSLLAGHGFLLARVEYVRAMGGRRLAVTHAGTRMAGHACGRRLAA 341

Query: 277 ESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN 335
             A   P  GP  A  + G +   G++         ++ GD ++  D   Y   R   ++
Sbjct: 342 YDAQGRPKGGPALAQDLAGPAQFDGELLASGVELPELEQGDWLAVLDTGAYGFARHQAYD 401

Query: 336 GINMPTI 342
            +  P I
Sbjct: 402 SLTRPGI 408


>gi|282901548|ref|ZP_06309470.1| Arginine decarboxylase [Cylindrospermopsis raciborskii CS-505]
 gi|281193591|gb|EFA68566.1| Arginine decarboxylase [Cylindrospermopsis raciborskii CS-505]
          Length = 671

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/295 (12%), Positives = 86/295 (29%), Gaps = 48/295 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLA--------LKCFAAWGMFDTLNQYM---- 52
           P  +     L + ++        A  +   +        +KC     + + L ++     
Sbjct: 100 PLLIRFSDILEDRIERLNSCFAKAIARYNYSGVYRGVFPVKCNQERHLIEDLVRFGKPHQ 159

Query: 53  DGTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLN 105
            G  + S  E+M+                YKD E                I+   + +++
Sbjct: 160 FGLEAGSKPELMIALALLDTPGALLVCNGYKDREYIETAMLAQKLGQTPIIVLEQIEEVD 219

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK-------- 156
                + +L  K  L +   +S         +     + G    + +E+  +        
Sbjct: 220 LAIAASAQLGIKPILGVRAKLSTQGMGRWGTSTGDRAKFGLTIPEIMEAVDRLRSANLLD 279

Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD------- 206
            +  L FH   +                I  E       ++++ +GGG+           
Sbjct: 280 CLQLLHFHIGSQISAINVIKDAIQEASRIYVELAMLGADMKFLDVGGGLGVDYDGSQTNF 339

Query: 207 ---KDYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDI 251
              K+Y ++++   +    +            +  E G AI ++ + L   VL  
Sbjct: 340 YASKNYNMQNYANDIVAELKDTCSESKIPVPTLISESGRAIASHQSVLIFDVLST 394


>gi|261414912|ref|YP_003248595.1| arginine decarboxylase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261371368|gb|ACX74113.1| arginine decarboxylase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302326162|gb|ADL25363.1| arginine 2-monooxygenase [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 632

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/267 (10%), Positives = 73/267 (27%), Gaps = 32/267 (11%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD 53
           + TP  L     L + ++        A        G   +  +K      + + +  +  
Sbjct: 57  VSTPVLLRFPDILDSRIEKIHECFTKATTEYGYKGGHYSIFPIKVNQQRAVLEEVVSHGS 116

Query: 54  ----GTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK 108
               G  + S  E+          +       YKD +   +      +       + K  
Sbjct: 117 KFNIGLEAGSKPELHAVLANMENPDALIICNGYKDEDFIELALLAQKMGKKIFIVVEKMN 176

Query: 109 DKAQKLHKKIGLRINPSV-------SYSKFILADPNRPFSRLGEKCKDKIESEIK----- 156
           +    +     + + P++       S       +     S+ G    + +E+        
Sbjct: 177 ELHLVVDLSRRIGVRPNIGIRIKLASSGSGKWEESGGYHSKFGLNSSELLEALDYIKEEK 236

Query: 157 ---NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
               +  + FH   +  +       L+       +       +E++ +GGG+        
Sbjct: 237 MEDCMKLIHFHLGSQITNIRHIKNGLREVSQFYVQIRKMGMGLEFVDVGGGLGVDYDG-T 295

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAI 237
                  +    ++Y+  +     EA 
Sbjct: 296 RSSNASSVNYSIQEYANDVVYAMFEAC 322


>gi|326800401|ref|YP_004318220.1| Orn/DAP/Arg decarboxylase 2, C-terminal protein [Sphingobacterium
           sp. 21]
 gi|326551165|gb|ADZ79550.1| Orn/DAP/Arg decarboxylase 2, C-terminal protein [Sphingobacterium
           sp. 21]
          Length = 463

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 48/393 (12%), Positives = 106/393 (26%), Gaps = 59/393 (15%)

Query: 12  QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV----MLGH 67
             L NN             K     K      + +   +      +SS +++     L  
Sbjct: 66  AILKNNYR--------GSYKYCYCTKSSHFRHVVEEALKNDIHLETSSAFDMPMIDALEK 117

Query: 68  EKFGGETH-AYNVAYKDCEIDAVLSNCDTIIFNTVSQ------LNKFKDKAQKLHKKIGL 120
           +    +        +K  +    + +     F  +             D   +L +   L
Sbjct: 118 KGVVSKDITVICNGFKTFQYKQYIVDMLHDGFKNIIPVLDNKEEFNLYDDEVELDEPCNL 177

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCK----DKIESEIKNVNGLMFHNNCENKSFLCFS 176
            I  +           +R   R+ +         + +    V  L F  N        + 
Sbjct: 178 GIRIAAEEQPDSQFYTSRLGVRMEDILDFYNNKIVHNPNFKVKLLHFFINSGISDTPYYW 237

Query: 177 AMLKNI---EKEFGHFITQIEWISLGGGIH----------FTDKDYPVKDFCQRLKEFSE 223
             L+       +F      ++ + +GGG+           +      + +  + +    E
Sbjct: 238 NELEKYVTLYCKFKKINPDLDTLDIGGGMPFKDSLVHDFDYEYMVNEIVNRIKEICALHE 297

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLL----YQE 277
                I  E G+  V   + +   VL   +       +++D S   ++PD       Y  
Sbjct: 298 VMEPDIITEFGKYTVAEASGILYKVLGRKQQNDREKWLMLDGSFITNLPDVWALNQKYIL 357

Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIF-----GEFHFEKPVKIGDRISFEDVAGYNINRKN 332
                 ++      + G +C   D +         F    +    + F     Y     +
Sbjct: 358 LPINNWDSEYERVNLGGITCDGQDYYNQEAHMNNVFMPRTRKVQYLGFFHTGAYQEVL-S 416

Query: 333 WFNGI-----NMPTIAVKNVDGTIKAIREFSYN 360
            + GI       P   +   +      R+ ++N
Sbjct: 417 GYGGIHHCLLPSPKHVIIRRN------RDETFN 443


>gi|302753366|ref|XP_002960107.1| hypothetical protein SELMODRAFT_70229 [Selaginella moellendorffii]
 gi|300171046|gb|EFJ37646.1| hypothetical protein SELMODRAFT_70229 [Selaginella moellendorffii]
          Length = 613

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/268 (10%), Positives = 69/268 (25%), Gaps = 33/268 (12%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52
           P  +   + L   L       + A          + +  +KC     + + +        
Sbjct: 62  PLIIRFPELLGARLRELQSAFQGAIHALGYNNRFQGVFPVKCNPDKLLVEEIVAAGKPFA 121

Query: 53  DGTTSSSLYEVML---GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109
            G  + S  E++L      K   +       YKD E   +     ++  + +  L +  +
Sbjct: 122 FGLEAGSKPELLLTMSAMCKAHPDAFLICNGYKDAEYVQLALLARSLGMDCIIVLEQLDE 181

Query: 110 KAQKLHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIESEIK------ 156
               +     L I P+        +       +      + G    + +E   +      
Sbjct: 182 VDLVIEMSQRLGIEPAIGVRSKLHTKHGGHWGETCGEGGKFGLSAPEIVEVARRLRRQGM 241

Query: 157 --NVNGLMFHNNCENKSFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
              +  + FH   +                +  E       +  + +GGG+         
Sbjct: 242 LDCLELVHFHVGSQIPCLSVVKDSVSEAAFLYCELALMGAGMRILDIGGGLGIDYDGSAS 301

Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
                 +     +Y+  +      A   
Sbjct: 302 ASSDMSVGYTVPEYASAVVAAIDAACAM 329


>gi|254300827|ref|ZP_04968271.1| Orn/DAP/Arg decarboxylases family 2 [Burkholderia pseudomallei
           406e]
 gi|157810918|gb|EDO88088.1| Orn/DAP/Arg decarboxylases family 2 [Burkholderia pseudomallei
           406e]
          Length = 155

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 33/129 (25%), Gaps = 11/129 (8%)

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL------LYQESATI 281
           +I LE G  +V+       +V+D   +     +V      H           + +    +
Sbjct: 27  EIVLELGRYLVSEAGIYVCSVVDRKVSNGVPFLVMDGGMHHHLSASGNLGQLIRRNYPVV 86

Query: 282 YPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNG 336
             N           V G  C   DI          + GD +       Y +      F  
Sbjct: 87  VGNRVVGDDRERVNVVGPLCTPLDIIAHQATLATARPGDLLVVFQSGAYGLTASPNGFLS 146

Query: 337 INMPTIAVK 345
                  + 
Sbjct: 147 QPAAREVIV 155


>gi|40642984|emb|CAD91418.1| ornithine decarboxylase [Crassostrea gigas]
          Length = 186

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 36/118 (30%), Gaps = 3/118 (2%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++              V    A+KC   + +   L+        +S  E+M 
Sbjct: 40  FFIGDLGDIIAKYQVWKETLPR--VMPFYAVKCNDDYAVLKLLSDIGVNFDCASKAEIMK 97

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
             +         Y    K        +  +  +    ++    K KA     K+ LRI
Sbjct: 98  VLDLGVDPSRIIYANPCKQNSFIKYAAKKNVEMMTFDNEDELHKVKALFPEAKLVLRI 155


>gi|167751940|ref|ZP_02424067.1| hypothetical protein ALIPUT_00182 [Alistipes putredinis DSM 17216]
 gi|167660181|gb|EDS04311.1| hypothetical protein ALIPUT_00182 [Alistipes putredinis DSM 17216]
          Length = 464

 Score = 65.2 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 50/400 (12%), Positives = 113/400 (28%), Gaps = 53/400 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKL--------LLALKCFAAWGMFDTLNQYMDG 54
            TP  +    K+   ++ A  +   A  K+            K      + +   +    
Sbjct: 42  GTPLKITYLPKISQQINRAKRMFNVAMAKVDYKGTYNYCYCTKSSHFSFVLEEAMKNDIH 101

Query: 55  TTSSSLYEVMLGHE-----KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQ----LN 105
             +SS Y++ + +          + +     +K  +    ++      F           
Sbjct: 102 LETSSAYDIHIINALYDSGVIDKDRYIICNGFKRPQYVENIAQLINDGFENTIPVIDNKE 161

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCK----DKIESEIKNVNGL 161
           +       + +K  + I  +           +R   R  +          +++   +  L
Sbjct: 162 EIDLYDDAITQKCKIGIRIASEEEPKFEFYTSRLGIRYNDIINFYKTKIQKNKKFKLKML 221

Query: 162 MFHNNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIH----------FTDKD 208
            F  N   K    +   L        E       ++ +++GGG            +    
Sbjct: 222 HFFINTGIKDTAYYWNELSKCLNIYCELKAICPDLDSLNIGGGFPIKNSLDFSYDYEYLT 281

Query: 209 YPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK--NLVIVDSSVE 266
             +    + +   +      I+ E G   V  +     ++++  +     N  ++DSS  
Sbjct: 282 EEIIAQIKNICTRNGIDEPHIFTEFGSFTVGESGATLYSIVNQKQQNDRENWYMIDSSFI 341

Query: 267 AHVPDYL-LYQESATIYPNTGPYTAM---VCGRSCLAGDIF-----GEFHFEKPVKIG-- 315
             +PD   + Q    +  N          + G +C + D +         F   ++ G  
Sbjct: 342 TTLPDTWGINQRYIMLAINNWDKEYQRVLLGGLTCDSEDFYNSESHINAIFLPKLEPGNP 401

Query: 316 DRISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDGT 350
             I F     Y  +    F G     I  P   + + D  
Sbjct: 402 QYIGFFHTGAYQESIG-GFGGIQHCLIPAPKHVIIDRDKD 440


>gi|300175606|emb|CBK20917.2| unnamed protein product [Blastocystis hominis]
          Length = 356

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 36/125 (28%), Gaps = 14/125 (11%)

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP------- 283
           +E          T+ T ++         +        +      Y       P       
Sbjct: 229 IEASRFFTEKAYTIYTRIIGKKVKHFGEIPHYLYYTDNGVYCSFYNRHINNEPLNPIPIK 288

Query: 284 -----NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY-NINRKNWFNGI 337
                +   Y + + G +C + D  G       ++IGD + FE+   Y   N    FNG 
Sbjct: 289 VSSSTDDSLYESTLFGPTCDSIDTLGTNFLLPDLEIGDWLKFEECG-YLCSNYSPQFNGF 347

Query: 338 NMPTI 342
             P  
Sbjct: 348 EDPAE 352


>gi|218679894|ref|ZP_03527791.1| diaminopimelate decarboxylase protein [Rhizobium etli CIAT 894]
          Length = 69

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 8/62 (12%), Positives = 17/62 (27%), Gaps = 3/62 (4%)

Query: 303 FGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
            G+       K GD I+      Y   +   +N   +    +             +Y + 
Sbjct: 2   IGKMVMP---KPGDLIAVSTAGAYGAVQAGTYNSRLLVPEVLVKGSDFHVIRPRRTYAEL 58

Query: 363 YN 364
            +
Sbjct: 59  IS 60


>gi|330959984|gb|EGH60244.1| arginine decarboxylase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 637

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/298 (12%), Positives = 80/298 (26%), Gaps = 46/298 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53
           P  +     L + +                 +    L  +K      + +  +       
Sbjct: 70  PLLVRFPDILQDRVRQLTGAFDSNIARLDYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106
           G  + S  E+M                YKD E   +      +  N    + K       
Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189

Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158
            ++ A+              S +    AD     S+ G      +            + +
Sbjct: 190 IEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRKAGLDQGI 249

Query: 159 NGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK-------- 207
             L FH   +  +   +    K       E       +++I +GGG+             
Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRKLGLPVDYIDVGGGLGVDYDGTHSRNAS 309

Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
             +Y + D+   +    +++          I+ E G ++  +   L   V D+ ++  
Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQGLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHND 367


>gi|330938314|gb|EGH41959.1| arginine decarboxylase [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 637

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/298 (12%), Positives = 80/298 (26%), Gaps = 46/298 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53
           P  +     L + +                 +    L  +K      + +  +       
Sbjct: 70  PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106
           G  + S  E+M                YKD E   +      +  N    + K       
Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189

Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158
            ++ A+              S +    AD     S+ G      +            + +
Sbjct: 190 IEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRKAGLDQGI 249

Query: 159 NGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK-------- 207
             L FH   +  +   +    K       E       +++I +GGG+             
Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRKLGLPVDYIDVGGGLGVDYDGTHSRNAS 309

Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
             +Y + D+   +    +++          I+ E G ++  +   L   V D+ ++  
Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHND 367


>gi|330887965|gb|EGH20626.1| arginine decarboxylase [Pseudomonas syringae pv. mori str. 301020]
          Length = 637

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/298 (12%), Positives = 80/298 (26%), Gaps = 46/298 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53
           P  +     L + +                 +    L  +K      + +  +       
Sbjct: 70  PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106
           G  + S  E+M                YKD E   +      +  N    + K       
Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189

Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158
            ++ A+              S +    AD     S+ G      +            + +
Sbjct: 190 IEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRKAGLDQGI 249

Query: 159 NGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK-------- 207
             L FH   +  +   +    K       E       +++I +GGG+             
Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRKLGLPVDYIDVGGGLGVDYDGTHSRNAS 309

Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
             +Y + D+   +    +++          I+ E G ++  +   L   V D+ ++  
Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHND 367


>gi|330873614|gb|EGH07763.1| arginine decarboxylase [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
          Length = 637

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/298 (12%), Positives = 80/298 (26%), Gaps = 46/298 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53
           P  +     L + +                 +    L  +K      + +  +       
Sbjct: 70  PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106
           G  + S  E+M                YKD E   +      +  N    + K       
Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189

Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158
            ++ A+              S +    AD     S+ G      +            + +
Sbjct: 190 IEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRKAGLDQGI 249

Query: 159 NGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK-------- 207
             L FH   +  +   +    K       E       +++I +GGG+             
Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRKLGLPVDYIDVGGGLGVDYDGTHSRNAS 309

Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
             +Y + D+   +    +++          I+ E G ++  +   L   V D+ ++  
Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHND 367


>gi|330867156|gb|EGH01865.1| arginine decarboxylase [Pseudomonas syringae pv. aesculi str.
           0893_23]
 gi|330871044|gb|EGH05753.1| arginine decarboxylase [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 637

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/298 (12%), Positives = 80/298 (26%), Gaps = 46/298 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53
           P  +     L + +                 +    L  +K      + +  +       
Sbjct: 70  PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106
           G  + S  E+M                YKD E   +      +  N    + K       
Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189

Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158
            ++ A+              S +    AD     S+ G      +            + +
Sbjct: 190 IEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRKAGLDQGI 249

Query: 159 NGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK-------- 207
             L FH   +  +   +    K       E       +++I +GGG+             
Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRKLGLPVDYIDVGGGLGVDYDGTHSRNAS 309

Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
             +Y + D+   +    +++          I+ E G ++  +   L   V D+ ++  
Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHND 367


>gi|283788540|ref|YP_003368405.1| biosynthetic arginine decarboxylase [Citrobacter rodentium ICC168]
 gi|282951994|emb|CBG91721.1| biosynthetic arginine decarboxylase [Citrobacter rodentium ICC168]
          Length = 658

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINAAFKRARESYGYKGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEVAIV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 207 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAAAQVLQLVEILREHGRLDSI 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    K  C
Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSKSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  I    G+A 
Sbjct: 327 S-VNYGLNEYANNIIWAIGDAC 347


>gi|237798392|ref|ZP_04586853.1| arginine decarboxylase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331021244|gb|EGI01301.1| arginine decarboxylase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 637

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/298 (12%), Positives = 80/298 (26%), Gaps = 46/298 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53
           P  +     L + +                 +    L  +K      + +  +       
Sbjct: 70  PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106
           G  + S  E+M                YKD E   +      +  N    + K       
Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189

Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158
            ++ A+              S +    AD     S+ G      +            + +
Sbjct: 190 IEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRKAGLDQGI 249

Query: 159 NGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK-------- 207
             L FH   +  +   +    K       E       +++I +GGG+             
Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRKLGLPVDYIDVGGGLGVDYDGTHSRNAS 309

Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
             +Y + D+   +    +++          I+ E G ++  +   L   V D+ ++  
Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQGLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHND 367


>gi|71734047|ref|YP_276540.1| arginine decarboxylase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|257483361|ref|ZP_05637402.1| arginine decarboxylase [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|289627378|ref|ZP_06460332.1| arginine decarboxylase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289647847|ref|ZP_06479190.1| arginine decarboxylase [Pseudomonas syringae pv. aesculi str. 2250]
 gi|71554600|gb|AAZ33811.1| arginine decarboxylase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|320322720|gb|EFW78813.1| arginine decarboxylase [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320330495|gb|EFW86474.1| arginine decarboxylase [Pseudomonas syringae pv. glycinea str. race
           4]
 gi|330987584|gb|EGH85687.1| arginine decarboxylase [Pseudomonas syringae pv. lachrymans str.
           M301315]
 gi|331012576|gb|EGH92632.1| arginine decarboxylase [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 637

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/298 (12%), Positives = 80/298 (26%), Gaps = 46/298 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53
           P  +     L + +                 +    L  +K      + +  +       
Sbjct: 70  PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106
           G  + S  E+M                YKD E   +      +  N    + K       
Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189

Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158
            ++ A+              S +    AD     S+ G      +            + +
Sbjct: 190 IEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRKAGLDQGI 249

Query: 159 NGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK-------- 207
             L FH   +  +   +    K       E       +++I +GGG+             
Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRKLGLPVDYIDVGGGLGVDYDGTHSRNAS 309

Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
             +Y + D+   +    +++          I+ E G ++  +   L   V D+ ++  
Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHND 367


>gi|28871957|ref|NP_794576.1| biosynthetic arginine decarboxylase [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|213968024|ref|ZP_03396170.1| biosynthetic arginine decarboxylase [Pseudomonas syringae pv.
           tomato T1]
 gi|301383659|ref|ZP_07232077.1| arginine decarboxylase [Pseudomonas syringae pv. tomato Max13]
 gi|302063182|ref|ZP_07254723.1| arginine decarboxylase [Pseudomonas syringae pv. tomato K40]
 gi|302131262|ref|ZP_07257252.1| arginine decarboxylase [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|46397730|sp|Q87VU3|SPEA_PSESM RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|28855210|gb|AAO58271.1| biosynthetic arginine decarboxylase [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|213927367|gb|EEB60916.1| biosynthetic arginine decarboxylase [Pseudomonas syringae pv.
           tomato T1]
 gi|331014720|gb|EGH94776.1| arginine decarboxylase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 637

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/298 (12%), Positives = 80/298 (26%), Gaps = 46/298 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53
           P  +     L + +                 +    L  +K      + +  +       
Sbjct: 70  PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106
           G  + S  E+M                YKD E   +      +  N    + K       
Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189

Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158
            ++ A+              S +    AD     S+ G      +            + +
Sbjct: 190 IEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRKAGLDQGI 249

Query: 159 NGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK-------- 207
             L FH   +  +   +    K       E       +++I +GGG+             
Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRKLGLPVDYIDVGGGLGVDYDGTHSRNAS 309

Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
             +Y + D+   +    +++          I+ E G ++  +   L   V D+ ++  
Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHND 367


>gi|220909300|ref|YP_002484611.1| arginine decarboxylase [Cyanothece sp. PCC 7425]
 gi|219865911|gb|ACL46250.1| arginine decarboxylase [Cyanothece sp. PCC 7425]
          Length = 655

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/313 (12%), Positives = 92/313 (29%), Gaps = 48/313 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52
           P  L     L + ++        A          + +  +KC     + + L ++     
Sbjct: 85  PLLLRFTDILEDRIERLNACFAKAIARYNYAGNYRGVFPVKCNQQRHLIEDLVRFGKPHQ 144

Query: 53  DGTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD-- 109
            G  + S  E+++                YKD E          +    +  L + ++  
Sbjct: 145 FGLEAGSKPELLIALATLNTPGALMICNGYKDREYIETAILARRLGQTCIIVLEQIEEIP 204

Query: 110 ----KAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------K 156
                +++L  +  L +   +S         +     + G    + + +           
Sbjct: 205 LVIAISRRLGIEPILGVRAKLSTKGIGRWGTSAGDRAKFGLTVPEILTAVEELRSAGMLH 264

Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD------- 206
            +  L FH   +                I  E      +++++ +GGG+           
Sbjct: 265 CLQLLHFHIGSQISAIGVIKDALREASQIYVELVRLGAKMQYLDVGGGLGVDYDGSKTNF 324

Query: 207 ---KDYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
              K+Y ++++   +    ++           +  E G AI ++ + L   VL  SE + 
Sbjct: 325 HASKNYSMQNYANDVVAEIKEACAARQLPVPTLISESGRAIASHQSVLIFDVLGTSEILS 384

Query: 257 NLVIVDSSVEAHV 269
                    +  +
Sbjct: 385 TEPEPAQDEDHSI 397


>gi|22297069|gb|AAM94458.1| ornithine decarboxylase [Carica papaya]
          Length = 251

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 67/237 (28%), Gaps = 12/237 (5%)

Query: 35  ALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNC 93
           A+KC         L         +S  E+          E   +    K           
Sbjct: 2   AVKCNPEPSFLSMLAAMGSNFDCASRAEIEYVLSLGISPERIVFANPCKPESDIIFAEKV 61

Query: 94  DTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCK---DK 150
              +    S+   +++K      ++ LRI P               +  L E+ +     
Sbjct: 62  GVNLTTYDSEDEVYENKKHHPKCELLLRIKPMND--GNARCPMGPKYGALPEEIEPLLRI 119

Query: 151 IESEIKNVNGLMFHNNCE----NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGI--HF 204
            ++    V+G+ FH        N      +A  +  E      ++++  + +GGG     
Sbjct: 120 AQASRLTVSGVSFHIGSGDADSNAYLGAIAAAKQVFETAAKFGMSKMNVLDIGGGFTSGH 179

Query: 205 TDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV 261
                         + FS +  + I  EPG        TL TT++            
Sbjct: 180 QFTTAATAVKSALQQHFSNEPELTIIAEPGRFFAETAFTLATTIIGKRVRGDLREYW 236


>gi|307105415|gb|EFN53664.1| hypothetical protein CHLNCDRAFT_25497 [Chlorella variabilis]
          Length = 701

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/282 (13%), Positives = 81/282 (28%), Gaps = 45/282 (15%)

Query: 12  QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLG- 66
                 +D   Y     GV     +K      +   + +Y      G    S  E+++  
Sbjct: 143 AAFRAAIDRFEYQGAYQGV---FPVKANHDRALIQAVVEYGAPHSFGLEVGSKAELVMVM 199

Query: 67  --HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                    T+     YKD E   ++ +C  +  N +  + ++ +    L     L + P
Sbjct: 200 SQLAGRPPGTNLVCNGYKDAEYMELVLHCRELGMNAMVVMEQYSEVDLLLGTARRLGVRP 259

Query: 125 SVS-------YSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCEN 169
           S+                 +   ++ G + ++ + +            ++ L FH   + 
Sbjct: 260 SIGIRAKLTTRHNGHWGSTSGDKAKFGLRAREIVAAVNKLGDEGMLDCLHLLHFHVGSQI 319

Query: 170 KSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-----------------DY 209
            +      +++     +         + +I  GGG+                        
Sbjct: 320 TNIRMVKEVMREASFLYAELVQMGASMRYIDCGGGLAVDYDGSFTDSSASMSYTLQHYAN 379

Query: 210 PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251
            V    Q +          I  E G A+ ++ + L   VL  
Sbjct: 380 DVVSAVQEVCIQRGIPPPTIITESGRALASHHSVLVFDVLTT 421


>gi|300722029|ref|YP_003711309.1| arginine decarboxylase, PLP-binding, biosynthetic [Xenorhabdus
           nematophila ATCC 19061]
 gi|297628526|emb|CBJ89096.1| arginine decarboxylase, PLP-binding, biosynthetic [Xenorhabdus
           nematophila ATCC 19061]
          Length = 634

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 78/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + +TL       G
Sbjct: 63  PALFCFPQILQHRLRSINAAFKRARESYGYKGDYFLVYPIKVNQQRRVIETLANADEPVG 122

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H    G     N       I        L +   ++   +S++   
Sbjct: 123 LEAGSKAELMAVLAHAGMTGTVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIELV 182

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 183 LEEAKRLNVIPRLGVRARLASQGSGKWQASGGEKSKFGLAASQVLQLIETLRSVGRLDSL 242

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 243 QLLHFHLGSQLANIRDVATGVRESARFYVELSKLGVNIQCFDVGGGLGVDYEGTRSQSEC 302

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  +    G+A   +
Sbjct: 303 S-VNYGLNEYANNVIWGIGDACEEH 326


>gi|238898614|ref|YP_002924295.1| biosynthetic arginine decarboxylase, PLP-binding [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
 gi|259511347|sp|C4K6F4|SPEA_HAMD5 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|229466373|gb|ACQ68147.1| biosynthetic arginine decarboxylase, PLP-binding [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
          Length = 633

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/341 (13%), Positives = 93/341 (27%), Gaps = 49/341 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L       K+A           L+  +K      + ++L +     G
Sbjct: 62  PALFFFPQILQHRLHAINKAFKSARDSFGYQGDYCLVYPIKVNQHRRVIESLLKSGESLG 121

Query: 55  TTSSSLYEVMLGHEKFGGET-HAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
             + S  E++      GG         YKD E   +    + + +     + K  +    
Sbjct: 122 LEAGSKAEMVAVLAYAGGTRSLIVCNGYKDREYIRLALMGEKLGYKVYLVIEKMSEIKMV 181

Query: 114 LHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIE--------SEIKNV 158
           L +   L + P         S             S+ G      ++          +  +
Sbjct: 182 LEEAKRLNVVPRLGVRARLASEGSGKWQASGGEKSKFGLSATQVLQLVEILKSADCLSGL 241

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK-------- 207
             L FH   +                   E      +I    +GGG+    +        
Sbjct: 242 QLLHFHLGSQLSNIHDIATGVRESARFYVELHKLGVKISCFDVGGGLGVDYEGTRSQSDC 301

Query: 208 --DYPVKDFCQRLKEFSEKYSVQIYL-------EPGEAIVTNTTTLNTTVLDISENIKNL 258
             +Y +K++   +     +   + +L       E G A+  + T L + V+ +  N    
Sbjct: 302 SVNYGLKEYANNVIWGIGEICNENHLPHPTVISESGRALTAHHTVLISNVIGVERNE--- 358

Query: 259 VIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLA 299
                + E H P  L              +   +      +
Sbjct: 359 FSPPQAPEKHSPRALESLWYTWQEMQKPDHRHSLRECLHDS 399


>gi|168015545|ref|XP_001760311.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162688691|gb|EDQ75067.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 659

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 76/270 (28%), Gaps = 33/270 (12%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLA--------LKCFAAWGMFDTLNQYM---- 52
           P  +     L N +DT          +   A        +KC     + + +  +     
Sbjct: 82  PLIIRFPDILKNRMDTLQAAFDRGITRQRYAGRFQGVFPVKCNPDRYLIEEIVSHGRRIN 141

Query: 53  DGTTSSSLYEVMLGHEKFGGETHA---YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109
            G  + S  E+++        +         YKD E   +     +I  NTV  L + ++
Sbjct: 142 FGLEAGSKPELLMVMAAMCNASTTAFLICNGYKDAEYVKMALAARSIGLNTVIVLEQLEE 201

Query: 110 KAQKLHKKIGLRINPSVSY-------SKFILADPNRPFSRLGEKCKDKIE--------SE 154
               +     L+I P +               + +    + G    + ++          
Sbjct: 202 LDIVIKMSKQLQIRPVIGVRAKLSTKHAGHWGETSGEKGKFGLSTSEIVQVVKRLRKVDM 261

Query: 155 IKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPV 211
              +  L FH   +  S       +      F         ++ I +GGG+         
Sbjct: 262 SDCLQLLHFHIGSQIPSLSIVREGVSEAAHIFCELALMGANMKVIDIGGGLGVDYDGTHS 321

Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
                 +    E+Y+  +     EA +   
Sbjct: 322 SSSDMSIGYNMEEYAETVVEAIKEATIQKN 351


>gi|307565693|ref|ZP_07628162.1| arginine 2-monooxygenase [Prevotella amnii CRIS 21A-A]
 gi|307345519|gb|EFN90887.1| arginine 2-monooxygenase [Prevotella amnii CRIS 21A-A]
          Length = 630

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/329 (10%), Positives = 87/329 (26%), Gaps = 46/329 (13%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
           ++D  ++          +K         ++  +K      + + +  +      G  + S
Sbjct: 67  ILD-NRIEKTASCFDQAKKEYNFNAENFIIYPIKVNQMQPVVEEIITHGRKFNLGLEAGS 125

Query: 60  LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112
             E+          +       YKD            +     I+   +++++     A+
Sbjct: 126 KPELHAVIAVQCQSDALIICNGYKDQSYIELALLAQKMGKRIFIVVEKLNEIDLIAHAAK 185

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIES--------EIKNVNGLMF 163
           KL+ K  L I   ++ S       +    S+ G    + + +           ++  + F
Sbjct: 186 KLNVKPNLGIRIKLASSGSGKWAESGGDASKFGLTSSELLNALELLDNKGLHDSLKLIHF 245

Query: 164 HNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
           H   +          L                +E++  GGG+               +  
Sbjct: 246 HIGSQITKIRRIQTALNEAGQYYVNLRKMGYNVEFVDCGGGLGVDYDGTRSSSSESSVNY 305

Query: 221 FSEKYSVQI------------------YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD 262
             ++Y                        E G ++  + + L   VL+ +   +     +
Sbjct: 306 SIQEYVNDCVYTFVDVSDKNNIPHPNIITESGRSLAAHHSILVIDVLETASLPEMSDDFE 365

Query: 263 SSVEAHVPDYLLYQESATIYPNTGPYTAM 291
           +    H     LY     +          
Sbjct: 366 AKETDHQLVRDLYDIWDNLDKRNMLEDWH 394


>gi|70734181|ref|YP_257821.1| arginine decarboxylase [Pseudomonas fluorescens Pf-5]
 gi|68348480|gb|AAY96086.1| biosynthetic arginine decarboxylase [Pseudomonas fluorescens Pf-5]
          Length = 637

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 86/305 (28%), Gaps = 46/305 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53
           P  +     L + +                 +    L  +K      + +  +       
Sbjct: 70  PLLVRFPDILQDRVRQLTGAFDANIGRLEYQSKYTALYPIKVNQQEAVIENIIATQNVSI 129

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106
           G  + S  E++                YKD E   +      +  N    + K       
Sbjct: 130 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVGLV 189

Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158
            ++ A    K          S +    AD     S+ G      +            + +
Sbjct: 190 IEEAASLKVKPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRAAGLDQGI 249

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207
             L FH   +  +   +    K   + +G        ++ I +GGG+             
Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRNLGLPVDHIDVGGGLGVDYDGTHSRNAS 309

Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
             +Y + D+   +    +++          I+ E G ++  +   L   V D+ ++  ++
Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHNDDV 369

Query: 259 VIVDS 263
             +D+
Sbjct: 370 PQIDN 374


>gi|39997632|ref|NP_953583.1| arginine decarboxylase [Geobacter sulfurreducens PCA]
 gi|123459994|sp|A0A4W3|SPEA_GEOSL RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|39984524|gb|AAR35910.1| biosynthetic arginine decarboxylase [Geobacter sulfurreducens PCA]
 gi|298506571|gb|ADI85294.1| biosynthetic arginine decarboxylase [Geobacter sulfurreducens
           KN400]
          Length = 635

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 80/269 (29%), Gaps = 33/269 (12%)

Query: 12  QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
             L   + +   + KNA          +    +K      + + + ++      G    S
Sbjct: 67  DVLQGRIASINRVFKNAIDENDYPATYQTFYPIKVNQQRQVVEAIAKFGKRYNIGLEVGS 126

Query: 60  LYEVMLGHEKFGGETH-AYNVAYKDCEIDAV------LSNCDTIIFNTVSQLNKFKDKAQ 112
             E+++G     G         YKD E          +    TI+   + +L K    ++
Sbjct: 127 KPELVIGISFATGNGIPIICNGYKDTEYIETVLYATKIGYDITIVVEKMFELEKIIALSK 186

Query: 113 KLHKKIGLRINPSVSYSKFILA-DPNRPFSRLGEKCKDKIES--------EIKNVNGLMF 163
           K   K  L I   +S              ++ G +  + I +         +  V  L F
Sbjct: 187 KTGIKPKLGIRVKLSSKGTGKWATSGGEDAKFGLRMSEIIAAIGLLEQNDLLDRVKLLHF 246

Query: 164 HNNCENKSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
           H   +        + L    + +         I ++ +GGG+           +   +  
Sbjct: 247 HIGSQITKIDKIKSALIEGTRIYAEMRKLGVGIRYVDIGGGLGVDYDG-SKSSYFSSVNY 305

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTLNTTVL 249
             E+Y+  +  +    I  +       ++
Sbjct: 306 SIEEYANDVIYQIKN-ICEDAGVECPNII 333


>gi|170723759|ref|YP_001751447.1| arginine decarboxylase [Pseudomonas putida W619]
 gi|169761762|gb|ACA75078.1| arginine decarboxylase [Pseudomonas putida W619]
          Length = 637

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/298 (13%), Positives = 86/298 (28%), Gaps = 46/298 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53
           P  +     L + +                 +    L  +K      + +  +       
Sbjct: 70  PLLVRFPDILQDRVRQLTGAFDANIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
           G  + S  E++                YKD E   +      +  N    + K  + A  
Sbjct: 130 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVALV 189

Query: 114 LHKKIGLRINPSV-------SYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158
           + +   L++ P V       S +    AD     S+ G      I            + +
Sbjct: 190 IEEAAELKVKPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLISVVQRFRDAGLDQGI 249

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207
             L FH   +  +   +    K   + +G        ++ I +GGG+             
Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRALGLPVDHIDVGGGLGVDYDGTHSRNAS 309

Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
             +Y + D+   +    +++          I+ E G ++  +   L   V D+ ++  
Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQGLPHPHIFSESGRSLTAHHAMLVIQVTDVEKHND 367


>gi|77456855|ref|YP_346360.1| arginine decarboxylase [Pseudomonas fluorescens Pf0-1]
 gi|77380858|gb|ABA72371.1| biosynthetic arginine decarboxylase [Pseudomonas fluorescens Pf0-1]
          Length = 637

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 86/305 (28%), Gaps = 46/305 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53
           P  +     L + +                 +    L  +K      + +  +       
Sbjct: 70  PLLVRFPDILQDRVRQLTGAFDANIERLEYQSKYTALYPIKVNQQEAVIENIIATQNVSI 129

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106
           G  + S  E++                YKD E   +      +  N    + K       
Sbjct: 130 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVGLV 189

Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158
            ++ A    K          S +    AD     S+ G      +            + +
Sbjct: 190 IEEAASLKVKPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRAAGLDQGI 249

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207
             L FH   +  +   +    K   + +G        ++ I +GGG+             
Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRNLGLPVDHIDVGGGLGVDYDGTHSRNAS 309

Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
             +Y + D+   +    +++          I+ E G ++  +   L   V D+ ++  ++
Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQALPHPHIFSESGRSLTAHHAMLVVQVTDVEKHNDDV 369

Query: 259 VIVDS 263
             +++
Sbjct: 370 PQIEN 374


>gi|298373176|ref|ZP_06983166.1| arginine decarboxylase, biosynthetic [Bacteroidetes oral taxon 274
           str. F0058]
 gi|298276080|gb|EFI17631.1| arginine decarboxylase, biosynthetic [Bacteroidetes oral taxon 274
           str. F0058]
          Length = 463

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 59/400 (14%), Positives = 122/400 (30%), Gaps = 53/400 (13%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKL--------LLALKCFAAWGMFDTLNQYMDG 54
            TP  +    K+  N+  A      A  K+            K      + + + ++   
Sbjct: 42  GTPLRIAYLPKIGQNIQRARRAFNVAMAKVDYQGDYNYCYCTKSSHFSFVMEEVLKHNVH 101

Query: 55  TTSSSLY-----EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK--- 106
             +SS +     E +  +     +T+     +K  +    + N   + F  +  +     
Sbjct: 102 IETSSAFDMNILENLYENGFLKPDTYILCNGFKRPQYVENIENLVDLGFKNIIPILDNKF 161

Query: 107 ---FKDKAQKLHKKIGLRINPSVSYSKFILADPNR--PFSRLGEKCKDKIESEIKNVNGL 161
                +   K    IG+RI                      +    K    ++  ++  L
Sbjct: 162 ELDLFNITPKRKFNIGIRIAAEEEPKFDFYTSRLGIRYNDIIPYCEKKIKPNKNVSLKML 221

Query: 162 MFHNNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIH---FTDKDYPVKDFC 215
            F  N   +    +   L  +     E  H    ++ +++GGG       D DY  +   
Sbjct: 222 HFFINTGIRDTAYYWNELNKVVNLYCELKHIFPSLDSLNIGGGFPIQAHLDFDYDYEYMA 281

Query: 216 QRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVE 266
           + +    +K           I+ E G   V  +  +  ++++  +        ++DSS  
Sbjct: 282 EEIVAQIKKTCKNNGVEDPHIFTEFGSYTVGESGAMLYSIINQKQQNDRELWNMIDSSFM 341

Query: 267 AHVPDYLL----YQESATIYPNTGPYTAMVCGRSCLAGDIF-----GEFHFEKPVKIGD- 316
             +PD       Y   A    +       + G +C + D +         F   +  G+ 
Sbjct: 342 TTLPDTWAINQRYVFLAINNWDKEYERVHMGGLTCDSEDFYNAEAHSNAIFMPKITNGEE 401

Query: 317 -RISFEDVAGYNINRKNWFNGINM-----PTIAVKNVDGT 350
             + F  +  Y  +    F GI       P + V + D T
Sbjct: 402 QYVGFFHMGAYQESLG-GFGGIQHCLIPGPKLVVIDRDET 440


>gi|260591838|ref|ZP_05857296.1| arginine 2-monooxygenase [Prevotella veroralis F0319]
 gi|260536122|gb|EEX18739.1| arginine 2-monooxygenase [Prevotella veroralis F0319]
          Length = 630

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/260 (10%), Positives = 74/260 (28%), Gaps = 28/260 (10%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
           ++D  ++          +K    K    ++  +K      + + +  +      G  + S
Sbjct: 67  ILD-NRIEKTSSCFEKAKKEYDFKAENFIIYPIKVNQMQPVVEEIISHGRKFNLGLEAGS 125

Query: 60  LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112
             E+          ++      YKD            +     I+   +++++     A+
Sbjct: 126 KPELHAVIAVQCQSDSLIICNGYKDQSYIELALLAQKMGKRIFIVVEKLNEIDLIARAAK 185

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIES--------EIKNVNGLMF 163
           KL+ K  L I   ++ S       +    S+ G    + +++           ++  + F
Sbjct: 186 KLNVKPNLGIRIKLASSGSGKWAESGGDASKFGLTSSELLQALETLDAKGLHDSLRLIHF 245

Query: 164 HNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
           H   +                           ++++  GGG+               +  
Sbjct: 246 HIGSQITKIRRIQTALNEAAQYYVNLRKMGYNVDFVDCGGGLGVDYDGTRSSSSESSVNY 305

Query: 221 FSEKYSVQIYLEPGEAIVTN 240
             ++Y         +A   +
Sbjct: 306 SIQEYVNDCVYTFVDAANKS 325


>gi|259909599|ref|YP_002649955.1| arginine decarboxylase [Erwinia pyrifoliae Ep1/96]
 gi|224965221|emb|CAX56753.1| Biosynthetic arginine decarboxylase [Erwinia pyrifoliae Ep1/96]
          Length = 658

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 74/262 (28%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINAAFKRACESYGYNGDYFLVYPIKVNQHKRVIESLINSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   ++++   
Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVLEKMTEVKLV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIKN--------V 158
            ++A++L+    L I   ++         +     + G      ++             +
Sbjct: 207 LEEAERLNVIPRLGIRARLASQGSGKWQSSGGEKSKFGLSATQVLKLVEIMREAGRVESL 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELAKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  +    G A 
Sbjct: 327 S-VNYGLNEYANNVIWAIGAAC 347


>gi|33866889|ref|NP_898448.1| arginine decarboxylase [Synechococcus sp. WH 8102]
 gi|46397729|sp|Q7U3S0|SPEA_SYNPX RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|33639490|emb|CAE08874.1| arginine decarboxylase [Synechococcus sp. WH 8102]
          Length = 644

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/234 (11%), Positives = 68/234 (29%), Gaps = 31/234 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52
           P  +     L + L+      + A          + +  +KC     + + L     ++ 
Sbjct: 65  PLLIRFDDILEDRLERLHAAFERAIAQYSYTGRYQGVFPVKCNQQRHVVEELVICGKRWN 124

Query: 53  DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105
            G  + S  E+++        E       YKD            +      +     +++
Sbjct: 125 FGLEAGSKAELLIALSLLDDPEALLICNGYKDRLYIETAILARRLGRQPVVVIEQPDEVD 184

Query: 106 KFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKI--------ESEIK 156
           +  + ++ L     + +   +S              ++ G    + +         + + 
Sbjct: 185 RIIEASKSLGAAPYIGVRAKLSSRSTGRWGSSVGDKAKFGLSIPELLATVERLRESNLLP 244

Query: 157 NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK 207
           ++  L FH   +          L+    I  E       + ++ +GGG+     
Sbjct: 245 DLRLLHFHIGSQINDIAVLKDALQEAGQIYVELTRLGAPMGFLDVGGGLGIDYD 298


>gi|294055064|ref|YP_003548722.1| arginine decarboxylase [Coraliomargarita akajimensis DSM 45221]
 gi|293614397|gb|ADE54552.1| arginine decarboxylase [Coraliomargarita akajimensis DSM 45221]
          Length = 641

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 74/288 (25%), Gaps = 48/288 (16%)

Query: 12  QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
             L   +     +   A          + +  +K      + + + +       G    S
Sbjct: 74  DMLRTRVVQLNELFAEAIAGEGYQGQYRGVFPIKVNQLREVVEEIREAGKPYHYGLECGS 133

Query: 60  LYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLN------KFKDKAQ 112
             E+M+        +       YKD E   +      +       +       +    ++
Sbjct: 134 KPELMIALAMHKDPKALIICNGYKDDEFIRMALYGRRLGKEIYLVVEQLSEVPRIIQISK 193

Query: 113 KLHKKIGLRINPSVSYSKFILA-DPNRPFSRLGEKCKDKIES--------EIKNVNGLMF 163
           KL     +     +S S        +   ++ G    + +++            +  + F
Sbjct: 194 KLGIDPLIGFRIKLSTSGEGKWASSSGEDAKFGLTSPEIVDAARRLKRAGLEHCLKLIHF 253

Query: 164 HNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------------- 207
           H   +    ++             E       +  + +GGG+                  
Sbjct: 254 HVGSQVPNIQTIKKAVVEATRFYCELSKMGFDMSLLDVGGGLGIDYDGSRSNYESSMNYT 313

Query: 208 ----DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251
                  V    + + E +      I  E G AIV   + L T V D 
Sbjct: 314 LREYTRDVVYNIKSICEDAGVPVPDIVSESGRAIVAPHSILVTEVCDR 361


>gi|73974235|ref|XP_858656.1| PREDICTED: similar to ornithine decarboxylase antizyme inhibitor
           isoform 8 [Canis familiaris]
          Length = 292

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 27/70 (38%)

Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGI 337
                 +   +T+ + G SC   D   E      + +GD + F+++   +++  + FN  
Sbjct: 184 HKKYKKDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSLHEPSAFNDF 243

Query: 338 NMPTIAVKNV 347
             P I     
Sbjct: 244 QRPAIYYMMS 253



 Score = 49.8 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 20/55 (36%), Gaps = 2/55 (3%)

Query: 6  YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
          +++ D  K++        I     +K    +KC +   + + L     G   SS 
Sbjct: 40 FFVGDLGKIVKKHSQWQNIVAQ--IKPFYTVKCNSTPAVLEILAALGTGFACSSK 92


>gi|300718237|ref|YP_003743040.1| Biosynthetic arginine decarboxylase [Erwinia billingiae Eb661]
 gi|299064073|emb|CAX61193.1| Biosynthetic arginine decarboxylase [Erwinia billingiae Eb661]
          Length = 658

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/266 (12%), Positives = 79/266 (29%), Gaps = 30/266 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINAAFKRARESYGYRGDYFLVYPIKVNQHKRVIESLINSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   ++++   
Sbjct: 147 LEAGSKAELMAVLAHAGQTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVLEKMTEVKLV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESE--------IKNV 158
            ++A++L+    L I   ++         +     + G      ++          ++++
Sbjct: 207 LEEAERLNVVPRLGIRARLASQGSGKWQSSGGEKSKFGLSATQVLKLVDIMREAGRMESL 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 267 QLLHFHLGSQMSNIRDIATGVRESARFYVELAKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTNT 241
             +     +Y+  +    G+A   + 
Sbjct: 327 S-VNYGLNEYANNVIWAIGDACEEHN 351


>gi|237729871|ref|ZP_04560352.1| biosynthetic arginine decarboxylase [Citrobacter sp. 30_2]
 gi|226908477|gb|EEH94395.1| biosynthetic arginine decarboxylase [Citrobacter sp. 30_2]
          Length = 666

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 95  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 154

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 155 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 214

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            D+A++L+    L +   ++         +     + G      ++            ++
Sbjct: 215 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAANQVLQLVEILRERGRLDSI 274

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 275 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 334

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  I    G+A   +
Sbjct: 335 S-VNYGLNEYANNIIWAIGDACEEH 358


>gi|15600032|ref|NP_253526.1| arginine decarboxylase [Pseudomonas aeruginosa PAO1]
 gi|107103938|ref|ZP_01367856.1| hypothetical protein PaerPA_01005009 [Pseudomonas aeruginosa PACS2]
 gi|116052987|ref|YP_793305.1| arginine decarboxylase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218893933|ref|YP_002442802.1| arginine decarboxylase [Pseudomonas aeruginosa LESB58]
 gi|254244263|ref|ZP_04937585.1| biosynthetic arginine decarboxylase [Pseudomonas aeruginosa 2192]
 gi|296391671|ref|ZP_06881146.1| arginine decarboxylase [Pseudomonas aeruginosa PAb1]
 gi|313109829|ref|ZP_07795764.1| biosynthetic arginine decarboxylase [Pseudomonas aeruginosa 39016]
 gi|48474962|sp|Q9HUX1|SPEA_PSEAE RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|9951109|gb|AAG08224.1|AE004897_2 biosynthetic arginine decarboxylase [Pseudomonas aeruginosa PAO1]
 gi|115588208|gb|ABJ14223.1| biosynthetic arginine decarboxylase [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126197641|gb|EAZ61704.1| biosynthetic arginine decarboxylase [Pseudomonas aeruginosa 2192]
 gi|218774161|emb|CAW29978.1| arginine decarboxylase (ADC) [Pseudomonas aeruginosa LESB58]
 gi|310882266|gb|EFQ40860.1| biosynthetic arginine decarboxylase [Pseudomonas aeruginosa 39016]
          Length = 636

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/298 (13%), Positives = 81/298 (27%), Gaps = 46/298 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53
           P  +     L + +                 +    L  +K      + +  +       
Sbjct: 70  PLLVRFPDILQDRVRKLTGAFDANIERLEYQSRYTALYPIKVNQQEAVVENIIATENVSI 129

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106
           G  + S  E+M                YKD E   +      +  N    + K       
Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIKLALMGQKLGHNVFIVIEKESEVQLV 189

Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158
            ++ A    +          S +    AD     ++ G      +            + V
Sbjct: 190 IEEAANVGVQPQVGLRVRLSSLASSKWADTGGEKAKFGLSAAQLLSVVERFRQAGLDQGV 249

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207
             L FH   +  +   +    K   + +G        ++ I +GGG+             
Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRALGLPVDHIDVGGGLGVDYDGTHSRNAS 309

Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
             +Y + D+   +    +++          I+ E G A+  +   L T V D+  +  
Sbjct: 310 SINYDIDDYAGVVVGMLKEFCDAQGLPHPHIFSESGRALTAHHAVLITQVTDVERHND 367


>gi|152988604|ref|YP_001350880.1| arginine decarboxylase [Pseudomonas aeruginosa PA7]
 gi|150963762|gb|ABR85787.1| arginine decarboxylase [Pseudomonas aeruginosa PA7]
          Length = 636

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/296 (13%), Positives = 81/296 (27%), Gaps = 46/296 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53
           P  +     L + +                 +    L  +K      + +  +       
Sbjct: 70  PLLVRFPDILQDRVRKLTGAFDANIQRLEYQSRYTALYPIKVNQQEAVVENIIATENVSI 129

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106
           G  + S  E+M                YKD E   +      +  N    + K       
Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVQLV 189

Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158
            ++ A    +          S +    AD     ++ G      +            + V
Sbjct: 190 IEEAATVGVQPQVGLRVRLSSLASSKWADTGGEKAKFGLSAAQLLSVVERFRKAGLDQGV 249

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207
             L FH   +  +   +    K   + +G        ++ I +GGG+             
Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRALGLPVDHIDVGGGLGVDYDGTHSRNAS 309

Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISEN 254
             +Y + D+   +    +++          I+ E G A+  +   L T V D+  +
Sbjct: 310 SINYDIDDYAGVVVGMLKEFCDAQGLPHPHIFSESGRALTAHHAVLITQVTDVERH 365


>gi|209527786|ref|ZP_03276279.1| arginine decarboxylase [Arthrospira maxima CS-328]
 gi|209491773|gb|EDZ92135.1| arginine decarboxylase [Arthrospira maxima CS-328]
          Length = 653

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/313 (12%), Positives = 96/313 (30%), Gaps = 48/313 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIR-------KNAGV-KLLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L + ++                GV + +  +KC     + + L ++     
Sbjct: 82  PLLIRFPDILEDRIERLNACFSKAIARYNYPGVYRGVYPVKCNQERHLIEDLVRFGEPYQ 141

Query: 53  DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK--D 109
            G  + S  E+++                YKD +          +   T+  + + +  +
Sbjct: 142 LGLEAGSKPELLIALACLTTPGALLICNGYKDRQYIETAMLAQRLGRKTIVVMEQLEEVE 201

Query: 110 KAQKLHKKIGLRINPSVSYS-----KFILADPNRPFSRLGEKCKDKIESEIK-------- 156
            A    + +G++    V                   ++ G    + I+   +        
Sbjct: 202 LAIAASQNLGIQPILGVRAKLGSRGVGRWGGSTGDRAKFGLTIPEIIQVCDRLQGLGMLD 261

Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTD------- 206
            +  L FH   +  S       ++   +   E       ++++ +GGG+           
Sbjct: 262 CLQLLHFHIGSQISSISAIKDAIREASQIYVELAKLGANMQYLDVGGGLGVDYDGSKTNA 321

Query: 207 ---KDYPVKDFCQRLKEFSEKYSVQ-------IYLEPGEAIVTNTTTLNTTVLDISENIK 256
              K+Y ++++   +    ++   Q       +  E G AI ++ + L   +L  SE   
Sbjct: 322 PASKNYNMQNYANDIVAEVKEACEQGKIDAPVLISESGRAIASHQSILVFDILGSSEPST 381

Query: 257 NLVIVDSSVEAHV 269
                 +  +  +
Sbjct: 382 ANPPNINDDDHLL 394


>gi|325300120|ref|YP_004260037.1| Biosynthetic arginine decarboxylase [Bacteroides salanitronis DSM
           18170]
 gi|324319673|gb|ADY37564.1| Biosynthetic arginine decarboxylase [Bacteroides salanitronis DSM
           18170]
          Length = 630

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/313 (10%), Positives = 88/313 (28%), Gaps = 49/313 (15%)

Query: 5   PYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L N ++          +  G      ++  +K      + + +  +     
Sbjct: 59  PMLVRFPDILDNRIEKISNCFQQAAEEYGYNAQNFIIYPIKVNQMRPVVEEIISHGKKFN 118

Query: 53  DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLN 105
            G  + S  E+          ++      YKD            +     ++    ++L 
Sbjct: 119 LGLEAGSKPELHTVIAINTDSDSLIICNGYKDESYIELALLAQKMGKRIFLVVEKQNELR 178

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK-------- 156
                A++L+ +  + I   ++ S     + +    S+ G    + +E+           
Sbjct: 179 LIAKIAKQLNVRPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDFIKEKKMED 238

Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213
            +  + FH   +    +              +       +E++ +GGG+          +
Sbjct: 239 CLKLIHFHIGSQVTKIRRIKTALREASQFYVQLYKMGFPVEFVDIGGGLGVDYDGTRSSN 298

Query: 214 FCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDISENI 255
               +    ++Y                     I  E G ++  + + L   VL+ +   
Sbjct: 299 SESSVNYSIQEYVNDSISIMVDASNKNGIPHPNIITESGRSLTAHHSVLIFEVLETASLP 358

Query: 256 KNLVIVDSSVEAH 268
                 +   + H
Sbjct: 359 SMDEEFEVGPDDH 371


>gi|325276668|ref|ZP_08142397.1| arginine decarboxylase [Pseudomonas sp. TJI-51]
 gi|324098195|gb|EGB96312.1| arginine decarboxylase [Pseudomonas sp. TJI-51]
          Length = 604

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/299 (13%), Positives = 86/299 (28%), Gaps = 46/299 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53
           P  +     L + +                 +    L  +K      + +  +       
Sbjct: 37  PLLVRFPDILQDRVRQLTGAFDANIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 96

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
           G  + S  E++                YKD E   +      +  N    + K  + A  
Sbjct: 97  GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVALV 156

Query: 114 LHKKIGLRINPSV-------SYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158
           + +   L++ P V       S +    AD     S+ G      +            + +
Sbjct: 157 IEEAAELKVKPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVQRFRDAGLDQGI 216

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207
             L FH   +  +   +    K   + +G        ++ I +GGG+             
Sbjct: 217 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRALGLPVDHIDVGGGLGVDYDGTHSRNAS 276

Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKN 257
             +Y + D+   +    +++          I+ E G ++  +   L   V D+ ++   
Sbjct: 277 SINYDMDDYAGVVVGMLKEFCDAQGLPHPHIFSESGRSLTAHHAMLVIQVTDVEKHNDQ 335


>gi|283479676|emb|CAY75592.1| arginine decarboxylase [Erwinia pyrifoliae DSM 12163]
          Length = 675

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 74/262 (28%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 104 PALFCFPQILQHRLRSINAAFKRACESYGYNGDYFLVYPIKVNQHKRVIESLINSGEPLG 163

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   ++++   
Sbjct: 164 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVLEKMTEVKLV 223

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIKN--------V 158
            ++A++L+    L I   ++         +     + G      ++             +
Sbjct: 224 LEEAERLNVIPRLGIRARLASQGSGKWQSSGGEKSKFGLSATQVLKLVEIMREAGRVESL 283

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 284 QLLHFHLGSQMANIRDIATGVRESARFYVELAKLGVNIQCFDVGGGLGVDYEGTRSQSDC 343

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  +    G A 
Sbjct: 344 S-VNYGLNEYANNVIWAIGAAC 364


>gi|307640133|gb|ADN83824.1| diaminopimelate decarboxylase-like protein [Brachionus manjavacas]
          Length = 134

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 26/54 (48%)

Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
           Y + + G +C   D+  +  F   +   + + F+D+  Y I+    FNGI +P 
Sbjct: 20  YKSSIWGPTCDGLDLVCKEIFIPELDTNECMVFKDMGAYTISGAVAFNGIPLPK 73


>gi|289768325|ref|ZP_06527703.1| lysine/ornithine decarboxylase [Streptomyces lividans TK24]
 gi|289698524|gb|EFD65953.1| lysine/ornithine decarboxylase [Streptomyces lividans TK24]
          Length = 233

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 62/207 (29%), Gaps = 14/207 (6%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG- 66
           + D   +    DT     +  GV +  A+K      +   L     G  ++S  EV    
Sbjct: 14  VYDLAGIERRHDTLRD--ELPGVHVRFAMKACPVDEVLAALAGRGAGADAASPGEVEQAL 71

Query: 67  HEKFG-GETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                 G  H  N    D  I             +++  +      A        +    
Sbjct: 72  RAGVPAGRVHYGNTVKSDRNIAEAHRLGVRTFATDSLQDVAALAVHAPGARVFCRVAT-- 129

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLK-- 180
               +  +    N+     G+  +  + +    +   GL  H   +  +   +   +   
Sbjct: 130 --GGAGALWGLSNKFGCPPGDAVRVLVAARDAGLVPAGLSVHVGSQQMTSEAWHGAVDDL 187

Query: 181 -NIEKEFGHFITQIEWISLGGGIHFTD 206
            ++ +  G    +++ ++LGGG+    
Sbjct: 188 GDVLRALGRHGIRVDHVNLGGGLPALR 214


>gi|227548363|ref|ZP_03978412.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227079561|gb|EEI17524.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 172

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 40/112 (35%), Gaps = 4/112 (3%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +P  +++   + +++D  +    + GV  ++  A K        D +     G   +S  
Sbjct: 46  SPVNVLNAAPMESHIDELVAAGASRGVDVRVFFARKANKGLTFVDAVRDAGHGVDVASFN 105

Query: 62  EVMLGHE-KFGGETHAYNVA-YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA 111
           E+    +    GE    + A   D  +   + +   I  + V +  +    A
Sbjct: 106 ELRQVIDRGVPGERIIVSAAIKTDELLRLAIDHGAVISADNVDEYERIARLA 157


>gi|307640135|gb|ADN83825.1| diaminopimelate decarboxylase-like protein [Brachionus manjavacas]
          Length = 134

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 26/54 (48%)

Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
           Y + + G +C   D+  +  F   +   + + F+D+  Y I+    FNGI +P 
Sbjct: 20  YKSSIWGPTCDGLDLVCKEIFIPELDTNECMVFKDMGAYTISGAVAFNGIPLPK 73


>gi|123965287|ref|YP_001010368.1| arginine decarboxylase [Prochlorococcus marinus str. MIT 9515]
 gi|166220852|sp|A2BU00|SPEA_PROM5 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|123199653|gb|ABM71261.1| Orn/DAP/Arg decarboxylases family 2 [Prochlorococcus marinus str.
           MIT 9515]
          Length = 648

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 46/316 (14%), Positives = 96/316 (30%), Gaps = 48/316 (15%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAG--------VKLLLALKCFAAWGMFDTLNQYMD 53
           I TP  L     L + +         A          + +  +KC     + + + +Y D
Sbjct: 66  INTPLILRFNDILKDRITELNNAFSQAIETYNYKNIFQGVFPIKCNQQKNVLEKIIEYGD 125

Query: 54  ----GTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCD------TIIFNTVS 102
               G    S  E+++G       ++      YKD +   +            I+   + 
Sbjct: 126 YWDFGLEVGSKSELLIGLSLLENKKSLLICNGYKDKKYIEIAILARKLGKQPIIVIEQID 185

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKI--------ES 153
           ++ +  +  + L     L I   +S              S+ G    + +         S
Sbjct: 186 EVQRIIEAVKNLRSTPILGIRSKLSSKSSGRWGKSVGDNSKFGLSIPEIMLTIKELKEAS 245

Query: 154 EIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDK--- 207
            I  +  L FH   +          L+   + F         +++I +GGG+        
Sbjct: 246 LINEMKLLHFHIGSQISDISVIKDALQEASQIFVELSKLGAPMKYIDVGGGLGIDFDGTK 305

Query: 208 -------DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISE 253
                  +Y ++++   +    +            I  E G AIV++ + L   VL  S 
Sbjct: 306 TSSNTSTNYSLQNYANDVVATIKDSCEVNNIQHPIIISESGRAIVSHCSVLIFDVLGTSH 365

Query: 254 NIKNLVIVDSSVEAHV 269
               + +      + +
Sbjct: 366 VSSQIKVSHQKKTSLI 381


>gi|222054775|ref|YP_002537137.1| arginine decarboxylase [Geobacter sp. FRC-32]
 gi|254772919|sp|B9M6H6|SPEA_GEOSF RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|221564064|gb|ACM20036.1| arginine decarboxylase [Geobacter sp. FRC-32]
          Length = 635

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 81/292 (27%), Gaps = 48/292 (16%)

Query: 12  QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
             L   + +     K+A          +    +K      + + +  Y      G    S
Sbjct: 67  DVLQGRIASINRAFKSAISENDYPAKYQTFFPIKVNQQRQVVEAIASYGKRYNIGLEVGS 126

Query: 60  LYEVMLGHEKFGGETH-AYNVAYKDCEIDAV------LSNCDTIIFNTVSQLNKFKDKAQ 112
             E++ G     G         YKD E          +    T++   + +L K  +  +
Sbjct: 127 KPELVAGISISSGNNLPIICNGYKDSEYIETVLYATAIGYDITLVIEKLFELEKVIELVK 186

Query: 113 KLHKKIGLRINPSVSYSKFILA-DPNRPFSRLGEKCKDKIESEI--------KNVNGLMF 163
           K   +  L I   +S              ++ G +  + I +            V  + F
Sbjct: 187 KTGIQPRLGIRVKLSSKGTGKWATSGGEDAKFGLRMSEIIAAIDLLEENGLLDRVKLIHF 246

Query: 164 HNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDK------------- 207
           H   +                +  E       IE++ +GGG+                  
Sbjct: 247 HIGSQITKIDKIKTALIEGARVYTELRKMGMGIEFVDIGGGLGVDYDGSKSSYFSSVNYS 306

Query: 208 ----DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI 255
                  V    + + + +      I  E G A V + + L T VL+ +   
Sbjct: 307 VEEYANDVIYQIKNICDDAGVECPNIISESGRATVAHYSVLVTNVLNTNTQR 358


>gi|261878989|ref|ZP_06005416.1| arginine 2-monooxygenase [Prevotella bergensis DSM 17361]
 gi|270334374|gb|EFA45160.1| arginine 2-monooxygenase [Prevotella bergensis DSM 17361]
          Length = 630

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/264 (9%), Positives = 74/264 (28%), Gaps = 28/264 (10%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
           ++D  ++       +  ++    K    ++  +K      + + +  +      G  + S
Sbjct: 67  ILD-NRIEKTASCFIKAKEEYEFKADNFIIYPIKVNQMQPVVEEIITHGRKFNLGLEAGS 125

Query: 60  LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112
             E+          +       YKD +          +     I+   +++L+     A+
Sbjct: 126 KPELHAVIAVQCQSDALIICNGYKDEDYIELALLAQKMGKRIFIVVEKLNELDTIAKVAK 185

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESE--------IKNVNGLMF 163
           +L     L +   ++ S     + +    S+ G    + +++           ++  + F
Sbjct: 186 RLKVSPNLGVRIKLASSGSGKWEESGGDASKFGLTATELLQALRKLDAMGMHDSLRLIHF 245

Query: 164 HNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
           H   +                           ++++  GGG+               +  
Sbjct: 246 HIGSQITKIRRIQTALREAAQYYINLHKMGYHVDFVDCGGGLGVDYDGTRSAHSESSVNY 305

Query: 221 FSEKYSVQIYLEPGEAIVTNTTTL 244
             ++Y         +A   N    
Sbjct: 306 SIQEYVNDCVSTFVDAANKNNIPH 329


>gi|77919692|ref|YP_357507.1| arginine decarboxylase [Pelobacter carbinolicus DSM 2380]
 gi|77545775|gb|ABA89337.1| arginine decarboxylase [Pelobacter carbinolicus DSM 2380]
          Length = 636

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/304 (13%), Positives = 81/304 (26%), Gaps = 48/304 (15%)

Query: 12  QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
             L   +       KNA          +    +K      + + +  Y      G    S
Sbjct: 67  DVLQGRIAAINRAFKNAIAEYEYPASYQTFFPIKVNQQRQVVEAIAHYGKKHHMGLEVGS 126

Query: 60  LYEVMLGHEKFGGETH-AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD------KAQ 112
             E++       GE        YKD +   ++     I ++    + K  +       ++
Sbjct: 127 KPELVAAISFATGEKLPIICNGYKDNDFIEMVLYATRIGYDITIVVEKLFELEKVIALSR 186

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ESEIKNVNGLMF 163
           +      L I   +S         +     + G K  + +           +  V  L F
Sbjct: 187 QSGIVPKLGIRVKLSSKGTGKWATSGGDEAKFGLKISELLAAVEILKEHDMLDTVKLLHF 246

Query: 164 HNNCENKSFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDK------------- 207
           H   +                I  E       +E++ +GGG+                  
Sbjct: 247 HIGSQITKIDKIKNALIEGTRIYVEMRKMGVGLEYMDIGGGMGVDYDGSKSSDFSSANYT 306

Query: 208 ----DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDS 263
                  V    + + + +      I  E G A V + + L T +L+ +         + 
Sbjct: 307 IDEYANDVVYQVKNICDEAGVSCPNIISESGRATVAHYSVLVTNILNTNTQNALPEFDEI 366

Query: 264 SVEA 267
              A
Sbjct: 367 LENA 370


>gi|289809536|ref|ZP_06540165.1| diaminopimelate decarboxylase [Salmonella enterica subsp.
          enterica serovar Typhi str. AG3]
          Length = 94

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 9/72 (12%), Positives = 20/72 (27%), Gaps = 6/72 (8%)

Query: 5  PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
          P ++ D   +   +             +  A K  +   +   +        S SL E+ 
Sbjct: 27 PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILRLMRAQGVKVDSVSLGEIE 81

Query: 65 LGH-EKFGGETH 75
                +  +T 
Sbjct: 82 RALAAGYDPQTC 93


>gi|34498331|ref|NP_902546.1| arginine decarboxylase [Chromobacterium violaceum ATCC 12472]
 gi|48474350|sp|Q7NU27|SPEA_CHRVO RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|34104185|gb|AAQ60544.1| arginine decarboxylase [Chromobacterium violaceum ATCC 12472]
          Length = 626

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/293 (12%), Positives = 83/293 (28%), Gaps = 46/293 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +     L + +         A            +  +K      +  ++    D   
Sbjct: 59  PLLVRFPDILQDRVTRLCGAFDKAIAEQGYGNRYTAIYPIKVNQQEAVVKSIIATQDVSI 118

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNKF 107
           G  + S  E+M                YKD E          L +   I+    S+++  
Sbjct: 119 GLEAGSKPELMAVLALAPKGCTIVCNGYKDREFIRLALIGERLGHQVFIVIEKESEVDLV 178

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIKNV 158
            ++++KL  +  + +   +S               + G      I +            V
Sbjct: 179 IEESRKLEVRPNIGLRVRLSSLASSKWSDTGGEKGKFGLSAGQLISATDKLIAAGLGDCV 238

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207
             + FH   +  +   +    +   + F         ++ + +GGG+             
Sbjct: 239 RLMHFHMGSQIANIADYRLGFREAIRYFAELRALGLPVDHVDVGGGLGVDYDGTHSRNDS 298

Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDI 251
             +Y + ++   +     ++         +I  E G A+  +   L   V D+
Sbjct: 299 SINYDMAEYAHVIVSMLSEFCAENGIPHPRILSESGRAMTAHHAVLLMNVTDV 351


>gi|256784446|ref|ZP_05522877.1| lysine/ornithine decarboxylase [Streptomyces lividans TK24]
          Length = 245

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 62/207 (29%), Gaps = 14/207 (6%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG- 66
           + D   +    DT     +  GV +  A+K      +   L     G  ++S  EV    
Sbjct: 26  VYDLAGIERRHDTLRD--ELPGVHVRFAMKACPVDEVLAALAGRGAGADAASPGEVEQAL 83

Query: 67  HEKFG-GETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                 G  H  N    D  I             +++  +      A        +    
Sbjct: 84  RAGVPAGRVHYGNTVKSDRNIAEAHRLGVRTFATDSLQDVAALAVHAPGARVFCRVAT-- 141

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLK-- 180
               +  +    N+     G+  +  + +    +   GL  H   +  +   +   +   
Sbjct: 142 --GGAGALWGLSNKFGCPPGDAVRVLVAARDAGLVPAGLSVHVGSQQMTSEAWHGAVDDL 199

Query: 181 -NIEKEFGHFITQIEWISLGGGIHFTD 206
            ++ +  G    +++ ++LGGG+    
Sbjct: 200 GDVLRALGRHGIRVDHVNLGGGLPALR 226


>gi|28268541|emb|CAD62572.1| ornithine decarboxylase [Sphaerechinus granularis]
          Length = 115

 Score = 64.8 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 10/76 (13%), Positives = 24/76 (31%), Gaps = 3/76 (3%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D   ++       ++R    V+   A+KC     +   L     G   +S  E+  
Sbjct: 42  FFIGDLGDVIQKHR--KWLRNLPRVEPHYAVKCNPDVHVLKLLAGLNIGFDCASKNEIQE 99

Query: 66  GHE-KFGGETHAYNVA 80
             +         +   
Sbjct: 100 ILKIGVSPSRIIFANP 115


>gi|296104604|ref|YP_003614750.1| biosynthetic arginine decarboxylase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295059063|gb|ADF63801.1| biosynthetic arginine decarboxylase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 632

 Score = 64.4 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/265 (12%), Positives = 77/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 61  PALFCFPQILQHRLRSINAAFKRARESYGYKGDYFLVYPIKVNQHRRVIESLIHSGEPLG 120

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   ++++   
Sbjct: 121 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMTEIAIV 180

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 181 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAANQVLQLVEILRERGRLDSI 240

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 241 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 300

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  I    G+A   +
Sbjct: 301 S-VNYGLNEYANNIIWAIGDACEEH 324


>gi|288550382|ref|ZP_05970216.2| arginine 2-monooxygenase [Enterobacter cancerogenus ATCC 35316]
 gi|288314992|gb|EFC53930.1| arginine 2-monooxygenase [Enterobacter cancerogenus ATCC 35316]
          Length = 637

 Score = 64.4 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/265 (12%), Positives = 77/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 66  PALFCFPQILQHRLRSINAAFKRARESYGYKGDYFLVYPIKVNQHRRVIESLIHSGEPLG 125

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   ++++   
Sbjct: 126 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMTEIAIV 185

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 186 LEEAERLNVIPRLGVRARLASQGSGKWQSSGGEKSKFGLAANQVLQLVEILRERGRLDSI 245

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 246 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 305

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  I    G+A   +
Sbjct: 306 S-VNYGLNEYANNIIWAIGDACEEH 329


>gi|330807331|ref|YP_004351793.1| arginine decarboxylase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375439|gb|AEA66789.1| Arginine decarboxylase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 637

 Score = 64.4 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/298 (12%), Positives = 81/298 (27%), Gaps = 46/298 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53
           P  +     L + +                 +    L  +K      + +  +       
Sbjct: 70  PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSKYTALYPIKVNQQEAVIENIIATQNVSI 129

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106
           G  + S  E++                YKD E   +      +  N    + K       
Sbjct: 130 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVGLV 189

Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158
            ++ A    K          S +    AD     S+ G      +            + +
Sbjct: 190 IEEAATLKVKPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRAAGLDQGI 249

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207
             L FH   +  +   +    K   + +G        ++ I +GGG+             
Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRNLGLPVDHIDVGGGLGVDYDGTHSRNAS 309

Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
             +Y + D+   +    +++          I+ E G ++  +   L   V D+ ++  
Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPNIFSESGRSLTAHHAMLVVQVTDVEKHND 367


>gi|156932620|ref|YP_001436536.1| arginine decarboxylase [Cronobacter sakazakii ATCC BAA-894]
 gi|156530874|gb|ABU75700.1| hypothetical protein ESA_00402 [Cronobacter sakazakii ATCC BAA-894]
          Length = 637

 Score = 64.4 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 66  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 125

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 126 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIKIV 185

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 186 LEEAERLNVIPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVEMLREANRLDSL 245

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 246 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 305

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  I    G+A 
Sbjct: 306 S-VNYGLNEYANNIIWAIGDAC 326


>gi|291086177|ref|ZP_06355041.2| arginine 2-monooxygenase [Citrobacter youngae ATCC 29220]
 gi|291068458|gb|EFE06567.1| arginine 2-monooxygenase [Citrobacter youngae ATCC 29220]
          Length = 637

 Score = 64.4 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 66  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 125

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 126 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 185

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            D+A++L+    L +   ++         +     + G      ++            ++
Sbjct: 186 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAANQVLQLVEILRERGRLDSI 245

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 246 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 305

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  I    G+A   +
Sbjct: 306 S-VNYGLNEYANNIIWAIGDACEEH 329


>gi|295097480|emb|CBK86570.1| arginine decarboxylase [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 637

 Score = 64.4 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/265 (12%), Positives = 77/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 66  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 125

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   ++++   
Sbjct: 126 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMTEIAIV 185

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 186 LEEAERLNVIPRLGVRARLASQGSGKWQSSGGEKSKFGLAANQVLQLVEILRERGRLDSI 245

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 246 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 305

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  I    G+A   +
Sbjct: 306 S-VNYGLNEYANNIIWAIGDACEEH 329


>gi|167031628|ref|YP_001666859.1| arginine decarboxylase [Pseudomonas putida GB-1]
 gi|166858116|gb|ABY96523.1| arginine decarboxylase [Pseudomonas putida GB-1]
          Length = 637

 Score = 64.4 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/298 (13%), Positives = 86/298 (28%), Gaps = 46/298 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53
           P  +     L + +                 +    L  +K      + +  +       
Sbjct: 70  PLLVRFPDILQDRVRQLTGAFDANIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
           G  + S  E++                YKD E   +      +  N    + K  + A  
Sbjct: 130 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVALV 189

Query: 114 LHKKIGLRINPSV-------SYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158
           + +   L++ P V       S +    AD     S+ G      +            + +
Sbjct: 190 IEEAAELKVKPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVQRFRDAGLDQGI 249

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207
             L FH   +  +   +    K   + +G        ++ I +GGG+             
Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRALGLPVDHIDVGGGLGVDYDGTHSRNAS 309

Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
             +Y + D+   +    +++          I+ E G ++  +   L   V D+ ++  
Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQGLPHPHIFSESGRSLTAHHAMLVIQVTDVEKHND 367


>gi|26987305|ref|NP_742730.1| arginine decarboxylase [Pseudomonas putida KT2440]
 gi|46397731|sp|Q88QC7|SPEA_PSEPK RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|24981952|gb|AAN66194.1|AE016247_4 biosynthetic arginine decarboxylase [Pseudomonas putida KT2440]
 gi|313496941|gb|ADR58307.1| SpeA [Pseudomonas putida BIRD-1]
          Length = 637

 Score = 64.4 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/298 (13%), Positives = 86/298 (28%), Gaps = 46/298 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53
           P  +     L + +                 +    L  +K      + +  +       
Sbjct: 70  PLLVRFPDILQDRVRQLTGAFDANIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
           G  + S  E++                YKD E   +      +  N    + K  + A  
Sbjct: 130 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVALV 189

Query: 114 LHKKIGLRINPSV-------SYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158
           + +   L++ P V       S +    AD     S+ G      +            + +
Sbjct: 190 IEEAAELKVKPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVQRFRDAGLDQGI 249

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207
             L FH   +  +   +    K   + +G        ++ I +GGG+             
Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRALGLPVDHIDVGGGLGVDYDGTHSRNAS 309

Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
             +Y + D+   +    +++          I+ E G ++  +   L   V D+ ++  
Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQGLPHPHIFSESGRSLTAHHAMLVIQVTDVEKHND 367


>gi|148545856|ref|YP_001265958.1| arginine decarboxylase [Pseudomonas putida F1]
 gi|148509914|gb|ABQ76774.1| arginine decarboxylase [Pseudomonas putida F1]
          Length = 637

 Score = 64.4 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/298 (13%), Positives = 86/298 (28%), Gaps = 46/298 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53
           P  +     L + +                 +    L  +K      + +  +       
Sbjct: 70  PLLVRFPDILQDRVRQLTGAFDANIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
           G  + S  E++                YKD E   +      +  N    + K  + A  
Sbjct: 130 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVALV 189

Query: 114 LHKKIGLRINPSV-------SYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158
           + +   L++ P V       S +    AD     S+ G      +            + +
Sbjct: 190 IEEAAELKVKPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVQRFRDAGLDQGI 249

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207
             L FH   +  +   +    K   + +G        ++ I +GGG+             
Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRALGLPVDHIDVGGGLGVDYDGTHSRNAS 309

Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
             +Y + D+   +    +++          I+ E G ++  +   L   V D+ ++  
Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQGLPHPHIFSESGRSLTAHHAMLVIQVTDVEKHND 367


>gi|313246907|emb|CBY35759.1| unnamed protein product [Oikopleura dioica]
          Length = 141

 Score = 64.4 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/113 (13%), Positives = 33/113 (29%), Gaps = 5/113 (4%)

Query: 3   KTPYY-LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           ++P   L D + L            +       A+K     G+         G  ++S+ 
Sbjct: 31  ESPVLDLYDLEGLRGRFKEVQDALPSWNH--AFAIKTNPIRGVMLEAKNCGLGAEAASIG 88

Query: 62  EVMLGHE-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112
           E+    +  F      Y +       +   L+    I  + + ++ K      
Sbjct: 89  ELEHALQLGFDRSKIVYDSPVKTKAHLKHALNAEVVINLDNLEEIEKVNQLQC 141


>gi|300865387|ref|ZP_07110196.1| arginine decarboxylase [Oscillatoria sp. PCC 6506]
 gi|300336622|emb|CBN55346.1| arginine decarboxylase [Oscillatoria sp. PCC 6506]
          Length = 655

 Score = 64.4 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 45/336 (13%), Positives = 101/336 (30%), Gaps = 51/336 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVK-----LL---LALKCFAAWGMFDTLNQYM---- 52
           P  +     L + ++        A  +     +      +KC     + + L ++     
Sbjct: 85  PLLIRFSDILEDRIERLNSCFAKAIARYNYKNVYRGVFPVKCNQHRHLVEDLVRFGQPHY 144

Query: 53  DGTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK- 110
            G  + S  E+M+                YKD E          +   +V  L + ++  
Sbjct: 145 FGLEAGSKPELMIALATLKTPGAMLICNGYKDREYVETAILAQRLGQTSVIVLEQIEEVQ 204

Query: 111 -------AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155
                  A  +   +G+R   S         +     ++ G    + + +          
Sbjct: 205 LAIEAGKALGIKPVLGVRAKLSTKGIGHWG-NSTGDRAKFGLTIPEIMRAVDELRSAEML 263

Query: 156 KNVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTD------ 206
             +  L FH   +  S       ++   +I  E       ++++ +GGG+          
Sbjct: 264 DCLQLLHFHIGSQISSISIIKEAIREASHIYVELAKLGANMKYLDVGGGLGVDYDGSKTN 323

Query: 207 ----KDYPVKDFCQRLKEFSEKYSVQI-------YLEPGEAIVTNTTTLNTTVLDISENI 255
               K+Y ++++   +    +    +          E G AI ++ + L   VL  S+  
Sbjct: 324 FHASKNYNMQNYANDVVAGVKDACDERKLPVPILISESGRAIASHQSVLIFDVLGTSDVP 383

Query: 256 KNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAM 291
           + +V      E  +    LY+   +I          
Sbjct: 384 REIVEPVGEDEHLI-PRNLYEIYQSINEENYQEVYH 418


>gi|237508163|ref|ZP_04520878.1| Orn/DAP/Arg decarboxylase family 2 [Burkholderia pseudomallei
           MSHR346]
 gi|235000368|gb|EEP49792.1| Orn/DAP/Arg decarboxylase family 2 [Burkholderia pseudomallei
           MSHR346]
          Length = 155

 Score = 64.4 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 33/129 (25%), Gaps = 11/129 (8%)

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL------LYQESATI 281
           +I LE G  +V+       +V+D   +     +V      H           + +    +
Sbjct: 27  EIVLELGRYLVSEAGIYVCSVVDRKVSNGVPFLVMDGGMHHHLSASGNMGQLIRRNYPVV 86

Query: 282 YPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNG 336
             N           V G  C   DI          + GD +       Y +      F  
Sbjct: 87  VGNRVVRDERERVNVVGPLCTPLDIIVHQATLATARPGDLLVVFQSGAYGLTASPNGFLS 146

Query: 337 INMPTIAVK 345
                  + 
Sbjct: 147 QPAAREVIV 155


>gi|307151103|ref|YP_003886487.1| arginine decarboxylase [Cyanothece sp. PCC 7822]
 gi|306981331|gb|ADN13212.1| arginine decarboxylase [Cyanothece sp. PCC 7822]
          Length = 684

 Score = 64.4 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/320 (12%), Positives = 100/320 (31%), Gaps = 55/320 (17%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVK-----LL---LALKCFAAWGMFDTLNQYM---- 52
           P  +     L + ++        A  +     +      +KC     + ++L +Y     
Sbjct: 95  PLLIRFSDILADRIERLNACFAKAIARYNYPNVYRGVYPIKCNQHRHIVESLVRYGKPFQ 154

Query: 53  DGTTSSSLYEVMLGHEKFGGE--------THAYNVAYKDCEIDA------VLSNCDTIIF 98
            G  + S  E+M+                       YKD E          +     I+ 
Sbjct: 155 FGLEAGSKPELMIALATLEPAENPQNNQSPLLICNGYKDREYIETALLATRIGLKPIIVI 214

Query: 99  NTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILA-DPNRPFSRLGEKCKDKIESEIK- 156
             + +++   + +++   K  L +   +S        + +   ++ G    + +    + 
Sbjct: 215 EQLKEVDIAIEISRQFGIKPILGVRAKLSSKGIGRWGNSSGERAKFGLTIPEILAVVHRL 274

Query: 157 -------NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTD 206
                   +  L +H   +  S       ++   + +G        ++++ +GGG+    
Sbjct: 275 QASEMLDCLQLLHYHVGSQISSITVVKDAIREAAQIYGELVNLGASMQYLDVGGGLGVDY 334

Query: 207 ----------KDYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVL 249
                     K+Y ++++   +    ++           +  E G AI  + + L   VL
Sbjct: 335 DGSKTNFYVSKNYNMQNYANDIVAEVQEACAERNIAAPVLISESGRAITAHHSVLIFDVL 394

Query: 250 DISENIKNLVIVDSSVEAHV 269
             SE  +   +  +  E  +
Sbjct: 395 GSSEVPRTPSLPGTEKEHLI 414


>gi|167924132|ref|ZP_02511223.1| hypothetical protein BpseBC_36578 [Burkholderia pseudomallei
           BCC215]
          Length = 155

 Score = 64.4 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 33/129 (25%), Gaps = 11/129 (8%)

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL------LYQESATI 281
           +I LE G  +V+       +V+D   +     +V      H           + +    +
Sbjct: 27  EIVLELGRYLVSEAGIYVCSVVDRKVSNGVPFLVMDGGMHHHLSASGNMGQLIRRNYPVV 86

Query: 282 YPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNG 336
             N           V G  C   DI          + GD +       Y +      F  
Sbjct: 87  VGNRVVGDERERVNVVGPLCTPLDIIVHQATLATARPGDLLVVFQSGAYGLTASPNGFLS 146

Query: 337 INMPTIAVK 345
                  + 
Sbjct: 147 QPAAREVIV 155


>gi|167899623|ref|ZP_02487024.1| hypothetical protein Bpse7_38170 [Burkholderia pseudomallei 7894]
          Length = 160

 Score = 64.4 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 33/129 (25%), Gaps = 11/129 (8%)

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL------LYQESATI 281
           +I LE G  +V+       +V+D   +     +V      H           + +    +
Sbjct: 32  EIVLELGRYLVSEAGIYVCSVVDRKVSNGVPFLVMDGGMHHHLSASGNMGQLIRRNYPVV 91

Query: 282 YPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNG 336
             N           V G  C   DI          + GD +       Y +      F  
Sbjct: 92  VGNRVVGDERERVNVVGPLCTPLDIIVHQATLATARPGDLLVVFQSGAYGLTASPNGFLS 151

Query: 337 INMPTIAVK 345
                  + 
Sbjct: 152 QPAAREVIV 160


>gi|15227223|ref|NP_179243.1| ADC1 (ARGININE DECARBOXYLASE 1); arginine decarboxylase
           [Arabidopsis thaliana]
 gi|12643847|sp|Q9SI64|SPE1_ARATH RecName: Full=Arginine decarboxylase 1; Short=ADC 1; Short=ADC-O;
           Short=ARGDC 1
 gi|4589977|gb|AAD26494.1| arginine decarboxylase [Arabidopsis thaliana]
 gi|30794011|gb|AAP40453.1| putative arginine decarboxylase [Arabidopsis thaliana]
 gi|330251409|gb|AEC06503.1| arginine decarboxylase 1 [Arabidopsis thaliana]
          Length = 702

 Score = 64.4 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/278 (12%), Positives = 80/278 (28%), Gaps = 36/278 (12%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L+                +  + +  +KC     + + + ++  G  
Sbjct: 96  PLIVRFPDVLKNRLECLQSAFDYAIQSQGYDSHYQGVYPVKCNQDRFIIEDIVEFGSGFR 155

Query: 56  ---TSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L          E       +KD E  ++            I+     +
Sbjct: 156 FGLEAGSKPEILLAMSCLCKGNPEAFLVCNGFKDSEYISLALFGRKLELNTVIVLEQEEE 215

Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D +QK++ +   GLR      +S    +       + G      +          
Sbjct: 216 LDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTVQILRVVRKLSQVG 274

Query: 156 --KNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
               +  L FH   +  S        A    +  E       ++ I +GGG+        
Sbjct: 275 MLDCLQLLHFHIGSQIPSTALLSDGVAEAAQLYCELVRLGAHMKVIDIGGGLGIDYDGSK 334

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248
             +    +    E+Y+    +     +    +  +  +
Sbjct: 335 SGESDLSVAYSLEEYA-AAVVASVRFVCDQKSVKHPVI 371


>gi|254184552|ref|ZP_04891141.1| Orn/DAP/Arg decarboxylases family 2 [Burkholderia pseudomallei
           1655]
 gi|184215144|gb|EDU12125.1| Orn/DAP/Arg decarboxylases family 2 [Burkholderia pseudomallei
           1655]
          Length = 155

 Score = 64.4 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 33/129 (25%), Gaps = 11/129 (8%)

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL------LYQESATI 281
           +I LE G  +V+       +V+D   +     +V      H           + +    +
Sbjct: 27  EIVLELGRYLVSEAGIYVCSVVDRKVSNGVPFLVMDGGMHHHLSASGNLGQLIRRNYPVV 86

Query: 282 YPN----TGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNG 336
             N           V G  C   DI          + GD +       Y +      F  
Sbjct: 87  VGNRVVGDERERVNVVGPLCTPLDIIVHQATLATARPGDLLVVFQSGAYGLTASPNGFLS 146

Query: 337 INMPTIAVK 345
                  + 
Sbjct: 147 QPAAREVIV 155


>gi|218671111|ref|ZP_03520782.1| probable ornithine decarboxylase protein [Rhizobium etli GR56]
          Length = 210

 Score = 64.4 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/213 (11%), Positives = 58/213 (27%), Gaps = 18/213 (8%)

Query: 46  DTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVA--YKDCEIDAVLSNCDTIIFNTVS 102
             L         +S+ E+ +  E        ++      +     A          ++  
Sbjct: 1   KLLAGLGSNFDCASVAEIEMALEAGATAARISFGNTIKKERDVARAHALGVSLFAVDSHE 60

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN--G 160
           ++ K    A        +  +   +           P   +       + +    +   G
Sbjct: 61  EVEKISRAAPGARVFCRVLTDGEGAEWPLSRKFGCVPQMAVDV----LVYAHQLGLQSYG 116

Query: 161 LMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC-- 215
           + FH   +      + + L + ++ F         ++ +++GGG                
Sbjct: 117 VSFHVGSQMTKVDAWDSALADAKRVFVSLAKQGIHLQMVNMGGGFPTKYLRDVPSAEAYG 176

Query: 216 ----QRLKEFSEKYSVQIYLEPGEAIVTNTTTL 244
               Q L+        Q  +EPG  +V N   +
Sbjct: 177 KSIYQALRTHFGNQIPQTIIEPGRGMVGNAGVI 209


>gi|1590814|gb|AAB09723.1| arginine decarboxylase [Arabidopsis thaliana]
          Length = 702

 Score = 64.4 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/278 (12%), Positives = 80/278 (28%), Gaps = 36/278 (12%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L+                +  + +  +KC     + + + ++  G  
Sbjct: 96  PLIVRFPDVLKNRLECLQSAFDYAIQSQGYDSHYQGVYPVKCNQDRFIIEDIVEFGSGFR 155

Query: 56  ---TSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L          E       +KD E  ++            I+     +
Sbjct: 156 FGLEAGSKPEILLAMSCLCKGNPEAFLVCNGFKDSEYISLALFGRKLELNTVIVLEQEEE 215

Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D +QK++ +   GLR      +S    +       + G      +          
Sbjct: 216 LDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTVQILRVVRKLSQVG 274

Query: 156 --KNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
               +  L FH   +  S        A    +  E       ++ I +GGG+        
Sbjct: 275 MLDCLQLLHFHIGSQIPSTALLSDGVAEAAQLYCELVRLGAHMKVIDIGGGLGIDYDGSK 334

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248
             +    +    E+Y+    +     +    +  +  +
Sbjct: 335 SGESDLSVAYSLEEYA-AAVVASVRFVCDQKSVKHPVI 371


>gi|285017180|ref|YP_003374891.1| arginine decarboxylase [Xanthomonas albilineans GPE PC73]
 gi|283472398|emb|CBA14903.1| probable arginine decarboxylase protein [Xanthomonas albilineans]
          Length = 629

 Score = 64.4 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 48/332 (14%), Positives = 98/332 (29%), Gaps = 46/332 (13%)

Query: 29  GVKLLLALKCFAAWGMFDTLNQY---MDGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCE 85
           G   +  +K     G+  TL  +     G  + S  E+M                YKD E
Sbjct: 92  GYTAVYPIKVNQHRGVAGTLASHQGEGFGLEAGSKPELMAVLALSRPGGLIVCNGYKDRE 151

Query: 86  IDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRP 139
              +            I+    S+L    D+A+ L  + GL +   ++         +  
Sbjct: 152 YIRLALIGRKLGLQTFIVIEKPSELKLVLDEARVLDVRPGLGVRMRLASLGAGKWQNSGG 211

Query: 140 FS-RLGEKCKDKIE--------SEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---G 187
              + G   +  ++             +N L FH   +  +    +  ++   + F    
Sbjct: 212 DKAKFGLAPRQLLDLWKTLRDTEYADALNLLHFHMGSQISNVRDIANGMREATRYFVELS 271

Query: 188 HFITQIEWISLGGGIHFTDKDYPVKDFCQR--------------LKEFSEKY---SVQIY 230
               +I  + +GGG+    +    +  C                L    E++     +I 
Sbjct: 272 KLGAKISHVDVGGGLGIDYEGTRSRSECSINYGLHAYASNIVQPLASACEEHGLAPPRIV 331

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE----AHVPDYL-LYQESATIYPNT 285
            E G A+  +   L   V ++ +  +  V      E     H+ +      +   +    
Sbjct: 332 TECGRAMTAHHAVLVANVSEVEQAPEGRVPDVHDDEPAAIRHMREIHAELDQRPAVELFQ 391

Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDR 317
                   G   L+    G+    +  +I D 
Sbjct: 392 EAQHFHAEG---LSAYALGQIDLAQRARIDDL 420


>gi|238763248|ref|ZP_04624213.1| Biosynthetic arginine decarboxylase [Yersinia kristensenii ATCC
           33638]
 gi|238698521|gb|EEP91273.1| Biosynthetic arginine decarboxylase [Yersinia kristensenii ATCC
           33638]
          Length = 581

 Score = 64.4 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/265 (12%), Positives = 76/265 (28%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 10  PALFCFPQILQHRLRSINGAFKRARESFGYEGDYFLVYPIKVNQHRRVIESLVNSGEPLG 69

Query: 55  TTSSSLYE--VMLGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E   +L H          N       I        L +   ++   +S++   
Sbjct: 70  LEAGSKAEMMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIKMV 129

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 130 LEEAERLNVVPRLGVRARLASQGSGKWQASGGEKSKFGLSATQVLQLVDMLREANSLESL 189

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 190 QLLHFHLGSQLSNIRDISTGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 249

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  +    G+A   +
Sbjct: 250 S-VNYGLNEYANNVIWGIGDACNEH 273


>gi|146312983|ref|YP_001178057.1| arginine decarboxylase [Enterobacter sp. 638]
 gi|145319859|gb|ABP62006.1| arginine decarboxylase [Enterobacter sp. 638]
          Length = 658

 Score = 64.4 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/266 (13%), Positives = 77/266 (28%), Gaps = 30/266 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINQAFKRARESYGYKGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            ++A++L+    L +   ++         +     + G      +E            ++
Sbjct: 207 LEEAERLNVIPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLELVEILRECGRLDSI 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTNT 241
             +     +Y+  I    G+A   N 
Sbjct: 327 S-VNYGLNEYANNIIWAIGDACEENN 351


>gi|312958754|ref|ZP_07773274.1| arginine decarboxylase [Pseudomonas fluorescens WH6]
 gi|311287297|gb|EFQ65858.1| arginine decarboxylase [Pseudomonas fluorescens WH6]
          Length = 637

 Score = 64.4 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/298 (12%), Positives = 81/298 (27%), Gaps = 46/298 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53
           P  +     L + +                 +    L  +K      + +  +       
Sbjct: 70  PLLVRFPDILQDRVRQLTGAFDSNIERLEYQSKYTALYPIKVNQQEAVIENIIATQNVSI 129

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106
           G  + S  E++                YKD E   +      +  N    + K       
Sbjct: 130 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVGLV 189

Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158
            ++ A    K          S +    AD     S+ G      +            + +
Sbjct: 190 IEEAASLKVKPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRAAGLDQGI 249

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207
             L FH   +  +   +    K   + +G        ++ I +GGG+             
Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRNLGLPVDHIDVGGGLGVDYDGTHSRNAS 309

Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
             +Y + D+   +    +++          I+ E G ++  +   L   V D+ ++  
Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPNIFSESGRSLTAHHAMLVVQVTDVEKHND 367


>gi|229588174|ref|YP_002870293.1| arginine decarboxylase [Pseudomonas fluorescens SBW25]
 gi|229360040|emb|CAY46894.1| biosynthetic arginine decarboxylase [Pseudomonas fluorescens SBW25]
          Length = 637

 Score = 64.4 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/298 (12%), Positives = 81/298 (27%), Gaps = 46/298 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53
           P  +     L + +                 +    L  +K      + +  +       
Sbjct: 70  PLLVRFPDILQDRVRQLTGAFDSNIERLEYQSKYTALYPIKVNQQEAVIENIIATQNVSI 129

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106
           G  + S  E++                YKD E   +      +  N    + K       
Sbjct: 130 GLEAGSKPELLAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189

Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158
            ++ A    K          S +    AD     S+ G      +            + +
Sbjct: 190 IEEAASLKVKPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRAAGLDQGI 249

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207
             L FH   +  +   +    K   + +G        ++ I +GGG+             
Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRNLGLPVDHIDVGGGLGVDYDGTHSRNAS 309

Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
             +Y + D+   +    +++          I+ E G ++  +   L   V D+ ++  
Sbjct: 310 SINYDMDDYAGVVVGMLKEFCDAQSLPHPNIFSESGRSLTAHHAMLVVQVTDVEKHND 367


>gi|312129401|ref|YP_003996741.1| orn/dap/arg decarboxylase 2 [Leadbetterella byssophila DSM 17132]
 gi|311905947|gb|ADQ16388.1| Orn/DAP/Arg decarboxylase 2 [Leadbetterella byssophila DSM 17132]
          Length = 490

 Score = 64.4 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 50/387 (12%), Positives = 110/387 (28%), Gaps = 50/387 (12%)

Query: 12  QKLLNNLDTALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG- 66
           + + ++        K    +         K      + DT  ++     +SS +++ L  
Sbjct: 55  EHIEHSKILFKNAMKKYNYRGNYTYCYCTKSSHFKFILDTALKHNIHLETSSAFDIPLIE 114

Query: 67  --HEKFGGETHAYNVAYKDCEIDAVLSNCDTII---FNTVSQLNKFKDKAQKLHKKIGLR 121
             +E+       Y +         + +  + I     N    L+   +    L       
Sbjct: 115 TLYEEGKITKDTYVICNGHKMPQYLKNITNLINQGFVNCTPILDNLDEIDHYLENVTADH 174

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFHNNCENKSFL 173
           +N  +  +       +   SRLG + KD            E   +  L F  N   K   
Sbjct: 175 VNIGIRIATDEEPTFSFYTSRLGIRYKDVDDLYLKKIKPDERFKLKMLHFFINSGIKDTA 234

Query: 174 CFSAMLKNIEKEFGHFI---TQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY 230
            + + L     ++        +++ I +GGG+          D+   + E  E      +
Sbjct: 235 YYWSELTRFMFKYCEMKRICPELDSIDIGGGMPIQTSVVYNFDYQAMVDEIIENIQWICH 294

Query: 231 ----------LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS---VEAHVPDYLLYQE 277
                      E G   V  +  +   ++D  +     +        +      + + Q+
Sbjct: 295 KNNVPVPNIFTEFGSYTVGESGAILYKIIDQKQQNDRELWYMIDGSFITQLPDSWGIGQK 354

Query: 278 SATIYPNTGPYTA---MVCGRSCLAGDIFGEFHFEKPV------KIGD-RISFEDVAGYN 327
              +  N          + G +C + D +      + +      +  D  I F     Y 
Sbjct: 355 YIMLPINNWDAPYTKVNLGGLTCDSADYYNTESHSEDLYMPIIDEKNDQYIGFFHTGAYQ 414

Query: 328 INRKNWFNG-----INMPTIAVKNVDG 349
            +    + G     I  P   + + D 
Sbjct: 415 ESLG-GYGGIQHCLIPAPKHVLIDRDE 440


>gi|325103507|ref|YP_004273161.1| Orn/DAP/Arg decarboxylase 2 [Pedobacter saltans DSM 12145]
 gi|324972355|gb|ADY51339.1| Orn/DAP/Arg decarboxylase 2 [Pedobacter saltans DSM 12145]
          Length = 463

 Score = 64.4 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/235 (13%), Positives = 70/235 (29%), Gaps = 36/235 (15%)

Query: 155 IKNVNGLMFHNNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIH-------- 203
              V  L F  N        +   L+       +F     +++ + +GGG+         
Sbjct: 216 NFRVKLLHFFINSGISDTPYYWNELEKYVTLYCKFKKVNPELDTLDIGGGMPFKDSLVFD 275

Query: 204 --FTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LV 259
             +      +    +++    +     I  E G+  V   + +   VL   +       +
Sbjct: 276 FDYEYMINEIVKRIKQICAAHDVMEPDIITEFGKYTVAEASGILYKVLGRKQQNDREKWL 335

Query: 260 IVDSSVEAHVPDYLL----YQESATIYPNTGPYTAMVCGRSCLAGDIFGE-----FHFEK 310
           ++D S   ++PD       Y        ++      + G +C   D + +       F  
Sbjct: 336 MLDGSFITNLPDVWALNQKYILLPINNWDSEYEKVNLGGITCDGQDYYSQEAHMNNVFMP 395

Query: 311 PVKIGDRISFEDVAGYNINRKNWFNGI-----NMPTIAVKNVDGTIKAIREFSYN 360
             +    + F     Y     + + GI       P   +   +      R+ ++N
Sbjct: 396 KTRKVQYLGFFHTGAYQEVL-SGYGGIHHCLLPSPKHVLIRRN------RDETFN 443


>gi|297567482|ref|YP_003686454.1| arginine decarboxylase [Meiothermus silvanus DSM 9946]
 gi|296851931|gb|ADH64946.1| arginine decarboxylase [Meiothermus silvanus DSM 9946]
          Length = 630

 Score = 64.4 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/284 (11%), Positives = 77/284 (27%), Gaps = 43/284 (15%)

Query: 12  QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLGH 67
           +     +    Y  +  G   L  +K      + +T+ +       G  + S  E+ L  
Sbjct: 81  EAFRRAIQKYEYKAEYRG---LYPVKVNQRRIVVETIAKAGRPYAHGLEAGSKAELALIL 137

Query: 68  E-KFGGETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
                 E       +KD +   +            I     ++L +    A++L  +  +
Sbjct: 138 AQDLHPEAIIACNGFKDDDFIRLALMGKKLGKNVIITLEKFAELGRVMRIAKELGVEPSI 197

Query: 121 RINPSVSYSKFILADPN-RPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCE--- 168
            I   +        + +    ++ G    + I +            +  L  H   +   
Sbjct: 198 GIRYKLKAKGSGQWEESGGESAKFGLTTPEIIRAVDLLAKAGMLGTIAMLHSHVGSQVTD 257

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK-----------------DYPV 211
            +        +     +       + +++LGGG+                         +
Sbjct: 258 IRRIKQAVREIAQTYVQLRKLGAPVRYLNLGGGLAVDYDGSKTAFYASANYTLSEYAEDL 317

Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI 255
               + + +   +    +  E G AI    + L   V+D     
Sbjct: 318 VYVTKEVCDGHGEPHPILVTESGRAITAYHSVLVLEVVDTIRPP 361



 Score = 38.2 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/98 (13%), Positives = 23/98 (23%), Gaps = 24/98 (24%)

Query: 288 YTAMVCGRSCLAGDIFGEFHFEK---------PVKIGD--RISFEDVAGYNINRKNWFNG 336
             A +   +C +   F  F              ++ G+   +       Y     N  N 
Sbjct: 492 REATLVDITCDSDGKFDRFIDLHDVRNTLPVHELRPGERYYLGVFLTGAYQDVLGNSHNL 551

Query: 337 INMP--TIAVKNVDG-----------TIKAIREFSYND 361
                      + DG             + I +  Y D
Sbjct: 552 FGRIGEAHVTIDEDGYDIERFVVGEKARRVIEKMGYED 589


>gi|260435501|ref|ZP_05789471.1| arginine decarboxylase [Synechococcus sp. WH 8109]
 gi|260413375|gb|EEX06671.1| arginine decarboxylase [Synechococcus sp. WH 8109]
          Length = 646

 Score = 64.4 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/234 (11%), Positives = 66/234 (28%), Gaps = 31/234 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L + L+      + A          + +  +KC     + + L        
Sbjct: 67  PLLIRFDDILEDRLEQLHAAFERAIAQYSYPGRYQGVFPVKCNQQRHVVEELVSCGKRWN 126

Query: 53  DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105
            G  + S  E+++        E       YKD            +      +     +++
Sbjct: 127 FGLEAGSKAELLIALSLLDDPEALLICNGYKDRLYIETAILARRLGRQPVVVIEQPDEVD 186

Query: 106 KFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKI--------ESEIK 156
           +  D ++ L     + I   +S              ++ G    + +         + + 
Sbjct: 187 RIIDASKSLGAAPYIGIRAKLSSRSTGRWGSSVGDKAKFGLSIPELLATVERLRENNLLP 246

Query: 157 NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK 207
           ++  L FH   +          L+    I  E       + ++ +GGG+     
Sbjct: 247 DLRLLHFHIGSQINDIAVLKDALQEAGQIYVELTRLGAPMGFLDVGGGLGIDYD 300


>gi|300771211|ref|ZP_07081087.1| arginine decarboxylase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300761881|gb|EFK58701.1| arginine decarboxylase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 463

 Score = 64.4 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 46/393 (11%), Positives = 107/393 (27%), Gaps = 59/393 (15%)

Query: 12  QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV----MLGH 67
             L +N             K     K      + +   +      +SS +++     L  
Sbjct: 66  AILKHNYR--------GSYKYCYCTKSSHFKHIVEEALKNDIHLETSSAFDMPMIDTLER 117

Query: 68  EK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQ------LNKFKDKAQKLHKKIGL 120
           +     +       +K  +    + +     +  +             D   +L +   L
Sbjct: 118 QGTVTKDITVICNGFKTYQYKQYIIDMIHDGYKNIIPVLDNKEEFNLYDDEIELDEPCNL 177

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCK----DKIESEIKNVNGLMFHNNCENKSFLCFS 176
            I  +           +R   R  +          ++    V  L F  N        + 
Sbjct: 178 GIRIASEEQPDSQFYTSRLGIRSEDIIDFYNNKIADNPNFRVKLLHFFINSGISDTPYYW 237

Query: 177 AMLKNI---EKEFGHFITQIEWISLGGGIH----------FTDKDYPVKDFCQRLKEFSE 223
             L+       +F     +++ + +GGG+           +      + +  +++    E
Sbjct: 238 NELEKYVTLYCKFKKINPELDTLDIGGGMPFKDSLVHDFDYEYMVNEIVNRIKQICAHHE 297

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLL----YQE 277
                I  E G+  V   + +   VL   +        ++D S   ++PD       Y  
Sbjct: 298 VMEPDIITEFGKYTVAEASGILYKVLGRKQQNDRERWFMIDGSFITNLPDVWALNQKYIL 357

Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEF-----HFEKPVKIGDRISFEDVAGYNINRKN 332
                 ++      + G +C   D + +       F    +    + F     Y     +
Sbjct: 358 LPINNWDSEYERVNLGGITCDGQDYYNQEAHMNSVFMPKTRKVQYLGFFHTGAYQDVL-S 416

Query: 333 WFNGI-----NMPTIAVKNVDGTIKAIREFSYN 360
            + GI       P   +   +      R+ ++N
Sbjct: 417 GYGGIHHCLLPSPKHVLVRRN------RDETFN 443


>gi|116071954|ref|ZP_01469222.1| arginine decarboxylase [Synechococcus sp. BL107]
 gi|116065577|gb|EAU71335.1| arginine decarboxylase [Synechococcus sp. BL107]
          Length = 646

 Score = 64.4 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/234 (11%), Positives = 65/234 (27%), Gaps = 31/234 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L + L+      + A          + +  +KC     + + L        
Sbjct: 67  PLLIRFDDILEDRLERLHSAFERAIAQYGYKGRYQGVFPVKCNQQRHVVEELVSCGKRWN 126

Query: 53  DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105
            G  + S  E+++        +       YKD            +      +     +++
Sbjct: 127 FGLEAGSKAELLIALSLLDDPDALLICNGYKDRLYIETAILARRLGRRPVVVIEQPDEVD 186

Query: 106 KFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKI--------ESEIK 156
           +  + ++ L     + I     S S           ++ G    D +           + 
Sbjct: 187 RIIEASRNLGAAPYIGIRAKLASRSTGRWGSSVGDKAKFGLAIPDLLTTVERLREHGLLD 246

Query: 157 NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK 207
           ++  L FH   +          L+    I  E       + ++ +GGG+     
Sbjct: 247 DLRLLHFHIGSQINDIAVLKDALQEAGQIYVELTRLGAPMGFLDVGGGLGIDYD 300


>gi|15603247|ref|NP_246321.1| arginine decarboxylase [Pasteurella multocida subsp. multocida str.
           Pm70]
 gi|48474635|sp|Q9CL60|SPEA_PASMU RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|12721756|gb|AAK03466.1| SpeA [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 644

 Score = 64.4 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 32/265 (12%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM- 52
           + T  +    Q + + L +     K A           L+  +K      + ++L     
Sbjct: 72  LPT-LFCF-PQIIQHRLRSINQAFKRAREDFGYEGNYFLVYPIKVNQHRRIVESLISSGQ 129

Query: 53  -DGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEIDAVLS-----NCDTIIFNTVSQL 104
             G  + S  E+M  L H          N       +   L      +   ++   +S++
Sbjct: 130 PLGLEAGSKAELMAVLAHAGITQTVIVCNGYKDREYVRFALMGEKLGHKVYLVIEKLSEI 189

Query: 105 NKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ESEI 155
               ++A KL+ K  L +   ++         +     + G      +           +
Sbjct: 190 QLVLEEAAKLNVKPRLGVRARLASQGSGKWQSSGGEKSKFGLSASQVLSLVQMLKEHECL 249

Query: 156 KNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK 212
             +  L FH   +    +              E       I+   +GGG+    +    +
Sbjct: 250 DCLQLLHFHLGSQLGNIRDVATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGNRTQ 309

Query: 213 DFCQRLKEFSEKYSVQIYLEPGEAI 237
             C  +     +Y+  +    G+A 
Sbjct: 310 SDCS-VNYGLNEYADTVVWGIGQAC 333


>gi|298490894|ref|YP_003721071.1| arginine decarboxylase ['Nostoc azollae' 0708]
 gi|298232812|gb|ADI63948.1| arginine decarboxylase ['Nostoc azollae' 0708]
          Length = 669

 Score = 64.0 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/295 (13%), Positives = 86/295 (29%), Gaps = 48/295 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKN-------AGV-KLLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L + ++                GV + +  +KC     + + L ++     
Sbjct: 99  PLLIRFSDILEDRIERLNACFAKAIARYNYPGVYRGVFPVKCNQERHLIEDLVRFGKPHQ 158

Query: 53  DGTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLN 105
            G  + S  E+M+                YKD E                I+   + +++
Sbjct: 159 FGLEAGSKPELMIALALLNTPGALLVCNGYKDREYIETAMLSQRLGQTAIIVIEQIEEVD 218

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK-------- 156
                  +L  K  L +   +S         +     + G    + +E+  K        
Sbjct: 219 LVIAANLQLGIKPILGVRAKLSTQGMGRWGTSTGDRAKFGLTIPEIMEAVDKLREANLLG 278

Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD------- 206
            +  L FH   +                I  E       ++++ +GGG+           
Sbjct: 279 CLQLLHFHIGSQISAINVIKDAIQEASRIYVELAMLGADMKYLDVGGGLGVDYDGSQTNF 338

Query: 207 ---KDYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDI 251
              K+Y ++++   +    +            +  E G AI ++ + L   VL  
Sbjct: 339 YASKNYNMQNYANDIVAELKDTCAERQITVPILISESGRAIASHQSVLIFDVLST 393


>gi|2331032|gb|AAB66828.1| ornithine decarboxylase [Plasmodium falciparum]
          Length = 947

 Score = 64.0 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 43/310 (13%), Positives = 82/310 (26%), Gaps = 11/310 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I T    I+ QK+L              V    ++K      +   L         +S+ 
Sbjct: 363 IDTSVVCINLQKILAQYVRFKKNL--PHVTPFYSVKSNNDEVVIKFLYGLNCNFDCASIG 420

Query: 62  EVMLGHEKFGG---ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           E+    +       +   +    K           +  +    +     K         +
Sbjct: 421 EISKVIKLLPNLSRDRIIFANTIKSINSLIYARKENINLCTFDNLDELKKIYKYHPKCSL 480

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
            LRIN      K  ++          E+     +    N+ G+ FH     K+   F   
Sbjct: 481 ILRINVDFKNYKSYMSSKYGANEYEWEEMLLYAKKHNLNIVGVSFHVGSNTKNLFDFCLA 540

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
           +K     F    + + +      +     +    D  +  K     Y      E  + I 
Sbjct: 541 IKLCRDVFDMS-SNMVFNFYIINLGGVYPEELEYDNVK--KHDKIHYCTLSLQEIKKDIQ 597

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCL 298
                   T L       +   +  ++   + D+        +     P + MV   S L
Sbjct: 598 K--FLNEETFLKTKYGYYSFEKISLAINMSI-DHYFSHMKDNLRVICEPGSYMVAASSTL 654

Query: 299 AGDIFGEFHF 308
           A  I G+   
Sbjct: 655 AVKIIGKRRP 664



 Score = 62.1 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 30/103 (29%)

Query: 243 TLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDI 302
             +  V D      + +I D      +            + N   Y A V G+SC   D+
Sbjct: 829 YFSYYVSDSIYGCFSGIIFDEYNRCPIYVIKNKNNPNQNFMNFNLYLANVFGQSCDGLDM 888

Query: 303 FGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
                +     I D + +E    Y     + FNG         
Sbjct: 889 INSITYLPECYINDWLLYEYAGAYTFVSSSNFNGFKKCKKVYI 931


>gi|309785233|ref|ZP_07679864.1| arginine decarboxylase [Shigella dysenteriae 1617]
 gi|308926353|gb|EFP71829.1| arginine decarboxylase [Shigella dysenteriae 1617]
 gi|323162616|gb|EFZ48463.1| arginine decarboxylase [Escherichia coli E128010]
 gi|323183509|gb|EFZ68906.1| arginine decarboxylase [Escherichia coli 1357]
 gi|323188667|gb|EFZ73952.1| arginine decarboxylase [Escherichia coli RN587/1]
          Length = 652

 Score = 64.0 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 81  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 140

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 141 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 200

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            D+A++L+    L +   ++         +     + G      ++            ++
Sbjct: 201 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 260

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 261 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 320

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  I    G+A 
Sbjct: 321 S-VNYGLNEYANNIIWAIGDAC 341


>gi|227540421|ref|ZP_03970470.1| arginine decarboxylase, biosynthetic [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|227239745|gb|EEI89760.1| arginine decarboxylase, biosynthetic [Sphingobacterium spiritivorum
           ATCC 33300]
          Length = 463

 Score = 64.0 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 46/393 (11%), Positives = 107/393 (27%), Gaps = 59/393 (15%)

Query: 12  QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV----MLGH 67
             L +N             K     K      + +   +      +SS +++     L  
Sbjct: 66  AILKHNYR--------GSYKYCYCTKSSHFKHIVEEALKNDIHLETSSAFDMPMIDTLER 117

Query: 68  EK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQ------LNKFKDKAQKLHKKIGL 120
           +     +       +K  +    + +     +  +             D   +L +   L
Sbjct: 118 QGTVTKDITVICNGFKTYQYKQYIIDMIHDGYKNIIPVLDNKEEFNLYDDEIELDEPCAL 177

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCK----DKIESEIKNVNGLMFHNNCENKSFLCFS 176
            I  +           +R   R  +          ++    V  L F  N        + 
Sbjct: 178 GIRIASEEQPDSQFYTSRLGIRSEDIIDFYNNKIADNPNFKVKLLHFFINSGISDTPYYW 237

Query: 177 AMLKNI---EKEFGHFITQIEWISLGGGIH----------FTDKDYPVKDFCQRLKEFSE 223
             L+       +F     +++ + +GGG+           +      + +  +++    E
Sbjct: 238 NELEKYVTLYCKFKKINPELDTLDIGGGMPFKDSLVHDFDYEYMVNEIVNRIKQICAHHE 297

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLL----YQE 277
                I  E G+  V   + +   VL   +        ++D S   ++PD       Y  
Sbjct: 298 VMEPDIITEFGKYTVAEASGILYKVLGRKQQNDRERWFMIDGSFITNLPDVWALNQKYIL 357

Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEF-----HFEKPVKIGDRISFEDVAGYNINRKN 332
                 ++      + G +C   D + +       F    +    + F     Y     +
Sbjct: 358 LPINNWDSEYERVNLGGITCDGQDYYNQEAHMNSVFMPKTRKVQYLGFFHTGAYQDVL-S 416

Query: 333 WFNGI-----NMPTIAVKNVDGTIKAIREFSYN 360
            + GI       P   +   +      R+ ++N
Sbjct: 417 GYGGIHHCLLPSPKHVLVRRN------RDETFN 443


>gi|325498498|gb|EGC96357.1| arginine decarboxylase [Escherichia fergusonii ECD227]
          Length = 652

 Score = 64.0 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 81  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 140

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 141 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 200

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            D+A++L+    L +   ++         +     + G      ++            ++
Sbjct: 201 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 260

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 261 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 320

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  I    G+A 
Sbjct: 321 S-VNYGLNEYANNIIWAIGDAC 341


>gi|294931193|ref|XP_002779780.1| arginine/diaminopimelate/ornithine decarboxylase, putative
           [Perkinsus marinus ATCC 50983]
 gi|239889442|gb|EER11575.1| arginine/diaminopimelate/ornithine decarboxylase, putative
           [Perkinsus marinus ATCC 50983]
          Length = 78

 Score = 64.0 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 289 TAMVCGRSCLAGDIFGEFH-FEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
           T ++ G +C   D   +       ++IGD + + ++  Y       FNG + P
Sbjct: 13  TQVLFGPTCDGFDTIMQGVTHLPEMEIGDHLLWRNMGAYTTAAATNFNGFDTP 65


>gi|332162797|ref|YP_004299374.1| arginine decarboxylase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|318604363|emb|CBY25861.1| biosynthetic arginine decarboxylase [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325667027|gb|ADZ43671.1| arginine decarboxylase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|330860342|emb|CBX70654.1| biosynthetic arginine decarboxylase [Yersinia enterocolitica
           W22703]
          Length = 659

 Score = 64.0 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/265 (12%), Positives = 76/265 (28%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 88  PALFCFPQILQHRLRSINGAFKRARESFGYEGDYFLVYPIKVNQHRRVIESLVNSGEPLG 147

Query: 55  TTSSSLYE--VMLGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E   +L H          N       I        L +   ++   +S++   
Sbjct: 148 LEAGSKAEMMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIKMV 207

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 208 LEEAERLNVVPRLGVRARLASQGSGKWQASGGEKSKFGLSATQVLQLVDMLRDANSLESL 267

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 268 QLLHFHLGSQLSNIRDISTGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 327

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  +    G+A   +
Sbjct: 328 S-VNYGLNEYANNVIWGIGDACNEH 351


>gi|308388669|gb|ADO30989.1| biosynthetic arginine decarboxylase [Neisseria meningitidis
           alpha710]
          Length = 630

 Score = 64.0 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 70/265 (26%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L       + A        G  L+  +K      + ++L       G
Sbjct: 59  PVLFCFPQILEHRLRDINRAFQTAREECGYKGGYCLVYPIKVNQHRRVIESLMSSGQPHG 118

Query: 55  TTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
             + S  E+M      G  +T      YKD E        + +       + K  +    
Sbjct: 119 LEAGSKAELMAVLAHAGTRQTLIVCNGYKDREYIRFALMGEKLGHQVYLVIEKLSEIQMV 178

Query: 114 LHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNV 158
           L +   L + P         S             S+ G      ++             +
Sbjct: 179 LEEAEKLGVKPRLGVRARLASQGSGKWQSSGGEKSKFGLSASQVLQLVDILKQKNRLDCL 238

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I    +GGG+    +    +  C
Sbjct: 239 QLLHFHLGSQLGNIRDVATGVHESARFYVELHKLGVNIRCFDVGGGLGVDYEGNRTQSDC 298

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  +     +A + +
Sbjct: 299 S-VNYSLNEYAATVVWGISQACLEH 322


>gi|290476618|ref|YP_003469523.1| arginine decarboxylase, PLP-binding, biosynthetic [Xenorhabdus
           bovienii SS-2004]
 gi|289175956|emb|CBJ82759.1| arginine decarboxylase, PLP-binding, biosynthetic [Xenorhabdus
           bovienii SS-2004]
          Length = 634

 Score = 64.0 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 42/287 (14%), Positives = 83/287 (28%), Gaps = 44/287 (15%)

Query: 13  KLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM--DGTTSSSLYEVM-- 64
           +L +        R++ G K    L+  +K      + ++L       G  + S  E+M  
Sbjct: 75  RLRSINAAFKRARESYGYKGDYFLVYPIKVNQQRRVIESLANAGEPIGLEAGSKAELMAV 134

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
           L H          N  YKD E   +    + +       + K  + A  L +   L + P
Sbjct: 135 LAHAGMTRTVIVCN-GYKDREYIRLALIGEKLGHKVYLVIEKMSEIAMVLEEAERLSVIP 193

Query: 125 S-------VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCE- 168
                    S             S+ G      ++            ++  L FH   + 
Sbjct: 194 RLGVRARLASQGAGKWQSSGGEKSKFGLAAAQVLQLVETLRSAGKLNSLQLLHFHLGSQL 253

Query: 169 --NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--------------DYPVK 212
              +              E       I+   +GGG+    +              +    
Sbjct: 254 ANIRDVATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSECSVNYGLNEYAN 313

Query: 213 DFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
           +    + +  E++      +  E G A+  + T L + V+ +  N  
Sbjct: 314 NVIWGIGDACEEHGLPHPTVITESGRALTAHHTVLISNVIGVEHNEF 360


>gi|238759316|ref|ZP_04620482.1| Biosynthetic arginine decarboxylase [Yersinia aldovae ATCC 35236]
 gi|238702477|gb|EEP95028.1| Biosynthetic arginine decarboxylase [Yersinia aldovae ATCC 35236]
          Length = 659

 Score = 64.0 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/265 (12%), Positives = 76/265 (28%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 88  PALFCFPQILQHRLRSINGAFKRARESFGYEGDYFLVYPIKVNQHRRVIESLVNSGEPLG 147

Query: 55  TTSSSLYE--VMLGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E   +L H          N       I        L +   ++   +S++   
Sbjct: 148 LEAGSKAEMMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIKMV 207

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 208 LEEAERLNVVPRLGVRARLASQGSGKWQASGGEKSKFGLSATQVLQLVDMLRKANSLESL 267

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 268 QLLHFHLGSQLSNIRDISTGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 327

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  +    G+A   +
Sbjct: 328 S-VNYGLNEYANNVIWGIGDACNEH 351


>gi|157110980|ref|XP_001651339.1| hypothetical protein AaeL_AAEL005694 [Aedes aegypti]
 gi|108878586|gb|EAT42811.1| conserved hypothetical protein [Aedes aegypti]
          Length = 417

 Score = 64.0 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/336 (12%), Positives = 91/336 (27%), Gaps = 26/336 (7%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +L +   ++       ++R  + V     ++      +  T      G   SS  EVM
Sbjct: 36  PVHLTELDNVVK--RHYQWVRHLSAVHPFYTVRTNNDLRILGTTVLLDCGYVCSSKIEVM 93

Query: 65  LGHE-KFGGETHAY-NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
              E     E     + A  D  +         + F+T  +L        +    I    
Sbjct: 94  QVLELGVDPEWILLKSAADSDDLLKFAQRKRLLLSFSTERELRNIHHVYSEAELLICFGY 153

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFH---NNCENKSFLCFSAML 179
                                     +  +    +V G  +     + ++ +        
Sbjct: 154 ELDPDA--------EHQSQIETHDLLNLAKELEMDVIGWSYEPSSVHLDHTTLHDAIRKG 205

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY-----SVQIYLEPG 234
           + I            +I++G G+    KD+ +  +  ++    + +     +  I  E G
Sbjct: 206 REITDFAMIVGFNFNFINIGNGL-SIHKDHDISQYAAQVNRSLQDFFPDRGNFTIVAESG 264

Query: 235 EAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMV 292
                   T  +T+    +  + +    ++        D+              P     
Sbjct: 265 PFHCAAAVTAISTINGKRVFWHPEFPSQIERVSYYLNHDFGDESSRFEPIIWKSPKDCGT 324

Query: 293 CGRSCL---AGDIFGEFHFEKPVKIGDRISFEDVAG 325
             RS L   + +   +      V   D + FE+   
Sbjct: 325 VCRSSLYASSNECLIDNLALPEVNEMDCMVFENQGA 360


>gi|218550186|ref|YP_002383977.1| arginine decarboxylase [Escherichia fergusonii ATCC 35469]
 gi|218357727|emb|CAQ90371.1| biosynthetic arginine decarboxylase, PLP-binding [Escherichia
           fergusonii ATCC 35469]
          Length = 658

 Score = 64.0 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            D+A++L+    L +   ++         +     + G      ++            ++
Sbjct: 207 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  I    G+A 
Sbjct: 327 S-VNYGLNEYANNIIWAIGDAC 347


>gi|163755454|ref|ZP_02162574.1| 50S ribosomal protein L19 [Kordia algicida OT-1]
 gi|161324874|gb|EDP96203.1| 50S ribosomal protein L19 [Kordia algicida OT-1]
          Length = 490

 Score = 64.0 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 52/398 (13%), Positives = 113/398 (28%), Gaps = 61/398 (15%)

Query: 13  KLLNNLDTALYIRKNAGVKLLLAL--------KCFAAWGMFDTLNQYMDGTTSSSLY--- 61
           K+  N++ A     NA  K   A         K      +     +      +SS +   
Sbjct: 53  KISENINNAKTWFANAMEKHNYAGNYNYCYCTKSSHFQHVLHEALKNDIHIETSSAFDID 112

Query: 62  --EVMLGHEKFGGETHAYNVAYKDCEI----DAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
             E +    K   E    +  +K  +       +++N        +    +    ++++ 
Sbjct: 113 IVENLKAQGKITDEAFVISNGFKRDQYVKNIGRLINNGHKNCIPIIDNYEEISLLSEEIQ 172

Query: 116 KKIGLRINPSVSYSKFILADPNRPF----SRLGEKCKDKIESEIKNVNGLMFHNNCENKS 171
               + I  +           +R      + +    +D  ++    +  L F  N   + 
Sbjct: 173 GNYNIGIRIASEEEPKFEFYTSRLGIGYKNIVPFYNRDIKDNPRVTLKMLHFFINTGIRD 232

Query: 172 FLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKY 225
              +         +          ++ +++GGG    +    DY  +     + +  ++ 
Sbjct: 233 TAYYWNELLKCMKVYINLKKVCPSLDSLNIGGGFPIKNSLAFDYDYEYMIDEIIQQIKQT 292

Query: 226 S-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLLYQ 276
                     I+ E G   V  +      VL   +        +++SS    +PD     
Sbjct: 293 CDEAGVAVPNIFTEFGSFTVGESGGAIYEVLYQKQQNDREKWNMINSSFITTMPDTWAIN 352

Query: 277 ES----ATIYPNTGPYTAMVCGRSCLAGD-----------IFGEFHFEKPVKIGDRISFE 321
           +                 ++ G +C + D              +F  EKP+ IG    F 
Sbjct: 353 KRFIMLPINGWQKEYERVLLGGLTCDSDDYYNSEQHMNAIYLPKFSKEKPLYIG----FF 408

Query: 322 DVAGYNINRKNWFNG-----INMPTIAVKNVDGTIKAI 354
           +   Y       F G     I  P   + + D     +
Sbjct: 409 NTGAYQETIG-GFGGLQHCLIPQPKHVLIDRDEEGNIV 445


>gi|123443613|ref|YP_001007585.1| arginine decarboxylase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122090574|emb|CAL13443.1| biosynthetic arginine decarboxylase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 659

 Score = 64.0 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/265 (12%), Positives = 76/265 (28%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 88  PALFCFPQILQHRLRSINGAFKRARESFGYEGDYFLVYPIKVNQHRRVIESLVNSGEPLG 147

Query: 55  TTSSSLYE--VMLGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E   +L H          N       I        L +   ++   +S++   
Sbjct: 148 LEAGSKAEMMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIKMV 207

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 208 LEEAERLNVVPRLGVRARLASQGSGKWQASGGEKSKFGLSATQVLQLVDMLRDANSLESL 267

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 268 QLLHFHLGSQLSNIRDISTGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 327

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  +    G+A   +
Sbjct: 328 S-VNYGLNEYANNVIWGIGDACNEH 351


>gi|48474389|sp|Q83Q93|SPEA_SHIFL RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
          Length = 662

 Score = 64.0 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            D+A++L+    L +   ++         +     + G      ++            ++
Sbjct: 207 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  I    G+A 
Sbjct: 327 S-VNYGLNEYANNIIWAIGDAC 347


>gi|332752983|gb|EGJ83367.1| arginine decarboxylase [Shigella flexneri 4343-70]
          Length = 658

 Score = 64.0 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            D+A++L+    L +   ++         +     + G      ++            ++
Sbjct: 207 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  I    G+A 
Sbjct: 327 S-VNYGLNEYANNIIWAIGDAC 347


>gi|315614900|gb|EFU95538.1| arginine decarboxylase [Escherichia coli 3431]
          Length = 652

 Score = 64.0 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 81  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 140

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 141 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 200

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            D+A++L+    L +   ++         +     + G      ++            ++
Sbjct: 201 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 260

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 261 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 320

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  I    G+A 
Sbjct: 321 S-VNYGLNEYANNIIWAIGDAC 341


>gi|147856|gb|AAA24646.1| arginine decarboxylase [Escherichia coli]
          Length = 658

 Score = 64.0 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 75/262 (28%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            D+A++L+    L +   +          +     + G      ++            ++
Sbjct: 207 LDEAERLNVVPRLGVRARLRSQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  I    G+A 
Sbjct: 327 S-VNYGLNEYANNIIWAIGDAC 347


>gi|30064254|ref|NP_838425.1| arginine decarboxylase [Shigella flexneri 2a str. 2457T]
 gi|30042511|gb|AAP18235.1| biosynthetic arginine decarboxylase [Shigella flexneri 2a str.
           2457T]
          Length = 658

 Score = 64.0 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            D+A++L+    L +   ++         +     + G      ++            ++
Sbjct: 207 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  I    G+A 
Sbjct: 327 S-VNYGLNEYANNIIWAIGDAC 347


>gi|15803477|ref|NP_289510.1| arginine decarboxylase [Escherichia coli O157:H7 EDL933]
 gi|15833068|ref|NP_311841.1| arginine decarboxylase [Escherichia coli O157:H7 str. Sakai]
 gi|74313495|ref|YP_311914.1| arginine decarboxylase [Shigella sonnei Ss046]
 gi|82545438|ref|YP_409385.1| arginine decarboxylase [Shigella boydii Sb227]
 gi|82778290|ref|YP_404639.1| arginine decarboxylase [Shigella dysenteriae Sd197]
 gi|110643088|ref|YP_670818.1| arginine decarboxylase [Escherichia coli 536]
 gi|117625168|ref|YP_854156.1| arginine decarboxylase [Escherichia coli APEC O1]
 gi|157155489|ref|YP_001464290.1| arginine decarboxylase [Escherichia coli E24377A]
 gi|157162397|ref|YP_001459715.1| arginine decarboxylase [Escherichia coli HS]
 gi|170018818|ref|YP_001723772.1| arginine decarboxylase [Escherichia coli ATCC 8739]
 gi|187731827|ref|YP_001881712.1| arginine decarboxylase [Shigella boydii CDC 3083-94]
 gi|209920398|ref|YP_002294482.1| arginine decarboxylase [Escherichia coli SE11]
 gi|215488236|ref|YP_002330667.1| arginine decarboxylase [Escherichia coli O127:H6 str. E2348/69]
 gi|218555497|ref|YP_002388410.1| arginine decarboxylase [Escherichia coli IAI1]
 gi|218559930|ref|YP_002392843.1| arginine decarboxylase [Escherichia coli S88]
 gi|218691062|ref|YP_002399274.1| arginine decarboxylase [Escherichia coli ED1a]
 gi|218696536|ref|YP_002404203.1| arginine decarboxylase [Escherichia coli 55989]
 gi|218701650|ref|YP_002409279.1| arginine decarboxylase [Escherichia coli IAI39]
 gi|218706453|ref|YP_002413972.1| arginine decarboxylase [Escherichia coli UMN026]
 gi|227888493|ref|ZP_04006298.1| arginine decarboxylase [Escherichia coli 83972]
 gi|254794890|ref|YP_003079727.1| arginine decarboxylase [Escherichia coli O157:H7 str. TW14359]
 gi|260845608|ref|YP_003223386.1| biosynthetic arginine decarboxylase SpeA, PLP-binding [Escherichia
           coli O103:H2 str. 12009]
 gi|260857071|ref|YP_003230962.1| biosynthetic arginine decarboxylase SpeA, PLP-binding [Escherichia
           coli O26:H11 str. 11368]
 gi|291284259|ref|YP_003501077.1| Biosynthetic arginine decarboxylase [Escherichia coli O55:H7 str.
           CB9615]
 gi|293406446|ref|ZP_06650372.1| biosynthetic arginine decarboxylase [Escherichia coli FVEC1412]
 gi|293412300|ref|ZP_06655023.1| arginine decarboxylase [Escherichia coli B354]
 gi|293449270|ref|ZP_06663691.1| arginine decarboxylase [Escherichia coli B088]
 gi|298382183|ref|ZP_06991780.1| biosynthetic arginine decarboxylase [Escherichia coli FVEC1302]
 gi|300815592|ref|ZP_07095816.1| arginine decarboxylase [Escherichia coli MS 107-1]
 gi|300824838|ref|ZP_07104941.1| arginine decarboxylase [Escherichia coli MS 119-7]
 gi|300900247|ref|ZP_07118429.1| arginine decarboxylase [Escherichia coli MS 198-1]
 gi|300906501|ref|ZP_07124194.1| arginine decarboxylase [Escherichia coli MS 84-1]
 gi|300925069|ref|ZP_07140985.1| arginine decarboxylase [Escherichia coli MS 182-1]
 gi|300928121|ref|ZP_07143665.1| arginine decarboxylase [Escherichia coli MS 187-1]
 gi|300940784|ref|ZP_07155327.1| arginine decarboxylase [Escherichia coli MS 21-1]
 gi|300979971|ref|ZP_07174821.1| arginine decarboxylase [Escherichia coli MS 45-1]
 gi|300995541|ref|ZP_07181141.1| arginine decarboxylase [Escherichia coli MS 200-1]
 gi|301027317|ref|ZP_07190659.1| arginine decarboxylase [Escherichia coli MS 69-1]
 gi|301049269|ref|ZP_07196241.1| arginine decarboxylase [Escherichia coli MS 185-1]
 gi|301306382|ref|ZP_07212451.1| arginine decarboxylase [Escherichia coli MS 124-1]
 gi|301327351|ref|ZP_07220604.1| arginine decarboxylase [Escherichia coli MS 78-1]
 gi|307310439|ref|ZP_07590087.1| arginine decarboxylase [Escherichia coli W]
 gi|309794026|ref|ZP_07688451.1| arginine decarboxylase [Escherichia coli MS 145-7]
 gi|312964798|ref|ZP_07779038.1| arginine decarboxylase [Escherichia coli 2362-75]
 gi|331648692|ref|ZP_08349780.1| arginine 2-monooxygenase [Escherichia coli M605]
 gi|331654450|ref|ZP_08355450.1| arginine 2-monooxygenase [Escherichia coli M718]
 gi|331674420|ref|ZP_08375180.1| arginine 2-monooxygenase [Escherichia coli TA280]
 gi|331678931|ref|ZP_08379605.1| arginine 2-monooxygenase [Escherichia coli H591]
 gi|48474463|sp|Q8FE34|SPEA_ECOL6 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|48474910|sp|Q8XCX9|SPEA_ECO57 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|12517481|gb|AAG58069.1|AE005524_5 biosynthetic arginine decarboxylase [Escherichia coli O157:H7 str.
           EDL933]
 gi|13363286|dbj|BAB37237.1| biosynthetic arginine decarboxylase [Escherichia coli O157:H7 str.
           Sakai]
 gi|73856972|gb|AAZ89679.1| biosynthetic arginine decarboxylase [Shigella sonnei Ss046]
 gi|81242438|gb|ABB63148.1| biosynthetic arginine decarboxylase [Shigella dysenteriae Sd197]
 gi|81246849|gb|ABB67557.1| biosynthetic arginine decarboxylase [Shigella boydii Sb227]
 gi|110344680|gb|ABG70917.1| biosynthetic arginine decarboxylase [Escherichia coli 536]
 gi|115514292|gb|ABJ02367.1| arginine decarboxylase [Escherichia coli APEC O1]
 gi|157068077|gb|ABV07332.1| arginine decarboxylase [Escherichia coli HS]
 gi|157077519|gb|ABV17227.1| arginine decarboxylase [Escherichia coli E24377A]
 gi|169753746|gb|ACA76445.1| arginine decarboxylase [Escherichia coli ATCC 8739]
 gi|187428819|gb|ACD08093.1| arginine decarboxylase [Shigella boydii CDC 3083-94]
 gi|209760178|gb|ACI78401.1| biosynthetic arginine decarboxylase [Escherichia coli]
 gi|209760180|gb|ACI78402.1| biosynthetic arginine decarboxylase [Escherichia coli]
 gi|209760182|gb|ACI78403.1| biosynthetic arginine decarboxylase [Escherichia coli]
 gi|209760184|gb|ACI78404.1| biosynthetic arginine decarboxylase [Escherichia coli]
 gi|209760186|gb|ACI78405.1| biosynthetic arginine decarboxylase [Escherichia coli]
 gi|209913657|dbj|BAG78731.1| biosynthetic arginine decarboxylase [Escherichia coli SE11]
 gi|215266308|emb|CAS10739.1| biosynthetic arginine decarboxylase, PLP-binding [Escherichia coli
           O127:H6 str. E2348/69]
 gi|218353268|emb|CAU99219.1| biosynthetic arginine decarboxylase, PLP-binding [Escherichia coli
           55989]
 gi|218362265|emb|CAQ99886.1| biosynthetic arginine decarboxylase, PLP-binding [Escherichia coli
           IAI1]
 gi|218366699|emb|CAR04456.1| biosynthetic arginine decarboxylase, PLP-binding [Escherichia coli
           S88]
 gi|218371636|emb|CAR19475.1| biosynthetic arginine decarboxylase, PLP-binding [Escherichia coli
           IAI39]
 gi|218428626|emb|CAR09410.1| biosynthetic arginine decarboxylase, PLP-binding [Escherichia coli
           ED1a]
 gi|218433550|emb|CAR14453.1| biosynthetic arginine decarboxylase, PLP-binding [Escherichia coli
           UMN026]
 gi|222034633|emb|CAP77375.1| biosynthetic arginine decarboxylase [Escherichia coli LF82]
 gi|227834762|gb|EEJ45228.1| arginine decarboxylase [Escherichia coli 83972]
 gi|254594290|gb|ACT73651.1| biosynthetic arginine decarboxylase, PLP-binding [Escherichia coli
           O157:H7 str. TW14359]
 gi|257755720|dbj|BAI27222.1| biosynthetic arginine decarboxylase SpeA, PLP-binding [Escherichia
           coli O26:H11 str. 11368]
 gi|257760755|dbj|BAI32252.1| biosynthetic arginine decarboxylase SpeA, PLP-binding [Escherichia
           coli O103:H2 str. 12009]
 gi|281179947|dbj|BAI56277.1| biosynthetic arginine decarboxylase [Escherichia coli SE15]
 gi|290764132|gb|ADD58093.1| Biosynthetic arginine decarboxylase [Escherichia coli O55:H7 str.
           CB9615]
 gi|291322360|gb|EFE61789.1| arginine decarboxylase [Escherichia coli B088]
 gi|291426452|gb|EFE99484.1| biosynthetic arginine decarboxylase [Escherichia coli FVEC1412]
 gi|291469071|gb|EFF11562.1| arginine decarboxylase [Escherichia coli B354]
 gi|294491214|gb|ADE89970.1| arginine decarboxylase [Escherichia coli IHE3034]
 gi|298277323|gb|EFI18839.1| biosynthetic arginine decarboxylase [Escherichia coli FVEC1302]
 gi|300298945|gb|EFJ55330.1| arginine decarboxylase [Escherichia coli MS 185-1]
 gi|300304814|gb|EFJ59334.1| arginine decarboxylase [Escherichia coli MS 200-1]
 gi|300356232|gb|EFJ72102.1| arginine decarboxylase [Escherichia coli MS 198-1]
 gi|300395092|gb|EFJ78630.1| arginine decarboxylase [Escherichia coli MS 69-1]
 gi|300401677|gb|EFJ85215.1| arginine decarboxylase [Escherichia coli MS 84-1]
 gi|300409373|gb|EFJ92911.1| arginine decarboxylase [Escherichia coli MS 45-1]
 gi|300418783|gb|EFK02094.1| arginine decarboxylase [Escherichia coli MS 182-1]
 gi|300454460|gb|EFK17953.1| arginine decarboxylase [Escherichia coli MS 21-1]
 gi|300463859|gb|EFK27352.1| arginine decarboxylase [Escherichia coli MS 187-1]
 gi|300522676|gb|EFK43745.1| arginine decarboxylase [Escherichia coli MS 119-7]
 gi|300531521|gb|EFK52583.1| arginine decarboxylase [Escherichia coli MS 107-1]
 gi|300838377|gb|EFK66137.1| arginine decarboxylase [Escherichia coli MS 124-1]
 gi|300846083|gb|EFK73843.1| arginine decarboxylase [Escherichia coli MS 78-1]
 gi|306909334|gb|EFN39829.1| arginine decarboxylase [Escherichia coli W]
 gi|307554920|gb|ADN47695.1| biosynthetic arginine decarboxylase [Escherichia coli ABU 83972]
 gi|308122433|gb|EFO59695.1| arginine decarboxylase [Escherichia coli MS 145-7]
 gi|312290354|gb|EFR18234.1| arginine decarboxylase [Escherichia coli 2362-75]
 gi|312947471|gb|ADR28298.1| arginine decarboxylase [Escherichia coli O83:H1 str. NRG 857C]
 gi|315062246|gb|ADT76573.1| biosynthetic arginine decarboxylase, PLP-binding protein
           [Escherichia coli W]
 gi|315256829|gb|EFU36797.1| arginine decarboxylase [Escherichia coli MS 85-1]
 gi|315289494|gb|EFU48889.1| arginine decarboxylase [Escherichia coli MS 110-3]
 gi|315293927|gb|EFU53279.1| arginine decarboxylase [Escherichia coli MS 153-1]
 gi|315295647|gb|EFU54970.1| arginine decarboxylase [Escherichia coli MS 16-3]
 gi|323377170|gb|ADX49438.1| arginine decarboxylase [Escherichia coli KO11]
 gi|323941973|gb|EGB38152.1| arginine decarboxylase [Escherichia coli E482]
 gi|323946562|gb|EGB42585.1| arginine decarboxylase [Escherichia coli H120]
 gi|323951621|gb|EGB47496.1| arginine decarboxylase [Escherichia coli H252]
 gi|323957337|gb|EGB53059.1| arginine decarboxylase [Escherichia coli H263]
 gi|324005512|gb|EGB74731.1| arginine decarboxylase [Escherichia coli MS 57-2]
 gi|324011790|gb|EGB81009.1| arginine decarboxylase [Escherichia coli MS 60-1]
 gi|324017264|gb|EGB86483.1| arginine decarboxylase [Escherichia coli MS 117-3]
 gi|324119735|gb|EGC13615.1| arginine decarboxylase [Escherichia coli E1167]
 gi|331042439|gb|EGI14581.1| arginine 2-monooxygenase [Escherichia coli M605]
 gi|331047832|gb|EGI19909.1| arginine 2-monooxygenase [Escherichia coli M718]
 gi|331068514|gb|EGI39909.1| arginine 2-monooxygenase [Escherichia coli TA280]
 gi|331073761|gb|EGI45082.1| arginine 2-monooxygenase [Escherichia coli H591]
          Length = 658

 Score = 64.0 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            D+A++L+    L +   ++         +     + G      ++            ++
Sbjct: 207 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  I    G+A 
Sbjct: 327 S-VNYGLNEYANNIIWAIGDAC 347


>gi|324115045|gb|EGC09010.1| arginine decarboxylase [Escherichia fergusonii B253]
          Length = 658

 Score = 64.0 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            D+A++L+    L +   ++         +     + G      ++            ++
Sbjct: 207 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  I    G+A 
Sbjct: 327 S-VNYGLNEYANNIIWAIGDAC 347


>gi|305677838|pdb|3NZQ|A Chain A, Crystal Structure Of Biosynthetic Arginine Decarboxylase
           Adc (Spea) From Escherichia Coli, Northeast Structural
           Genomics Consortium Target Er600
 gi|305677839|pdb|3NZQ|B Chain B, Crystal Structure Of Biosynthetic Arginine Decarboxylase
           Adc (Spea) From Escherichia Coli, Northeast Structural
           Genomics Consortium Target Er600
          Length = 666

 Score = 64.0 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            D+A++L+    L +   ++         +     + G      ++            ++
Sbjct: 207 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  I    G+A 
Sbjct: 327 S-VNYGLNEYANNIIWAIGDAC 347


>gi|78185739|ref|YP_378173.1| arginine decarboxylase [Synechococcus sp. CC9902]
 gi|78170033|gb|ABB27130.1| arginine decarboxylase [Synechococcus sp. CC9902]
          Length = 642

 Score = 64.0 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/234 (11%), Positives = 66/234 (28%), Gaps = 31/234 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L + L+      + A          + +  +KC     + + L        
Sbjct: 63  PLLIRFDDILEDRLERLHSAFERAIAQYGYKGRYQGVFPVKCNQQRHVVEELVSCGKRWN 122

Query: 53  DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105
            G  + S  E+++        +       YKD            +      +     +++
Sbjct: 123 FGLEAGSKAELLIALSLLDDPDALLICNGYKDRLYIETAILARRLGRRPVVVIEQPDEVD 182

Query: 106 KFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIES--------EIK 156
           +  + ++ L     + I     S S           ++ G    D + +         + 
Sbjct: 183 RIIEASRNLGAAPYIGIRAKLASRSTGRWGSSVGDKAKFGLAIPDLLTTVERLRDNGLLD 242

Query: 157 NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK 207
           ++  L FH   +          L+    I  E       + ++ +GGG+     
Sbjct: 243 DLRLLHFHIGSQINDIAVLKDALQEAGQIYVELTRLGAPMGFLDVGGGLGIDYD 296


>gi|331659074|ref|ZP_08360016.1| arginine 2-monooxygenase [Escherichia coli TA206]
 gi|331664522|ref|ZP_08365428.1| arginine 2-monooxygenase [Escherichia coli TA143]
 gi|331684567|ref|ZP_08385159.1| arginine 2-monooxygenase [Escherichia coli H299]
 gi|331053656|gb|EGI25685.1| arginine 2-monooxygenase [Escherichia coli TA206]
 gi|331058453|gb|EGI30434.1| arginine 2-monooxygenase [Escherichia coli TA143]
 gi|331078182|gb|EGI49388.1| arginine 2-monooxygenase [Escherichia coli H299]
          Length = 637

 Score = 64.0 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 66  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 125

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 126 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 185

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            D+A++L+    L +   ++         +     + G      ++            ++
Sbjct: 186 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 245

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 246 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 305

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  I    G+A 
Sbjct: 306 S-VNYGLNEYANNIIWAIGDAC 326


>gi|260869625|ref|YP_003236027.1| biosynthetic arginine decarboxylase SpeA, PLP-binding [Escherichia
           coli O111:H- str. 11128]
 gi|257765981|dbj|BAI37476.1| biosynthetic arginine decarboxylase SpeA, PLP-binding [Escherichia
           coli O111:H- str. 11128]
 gi|323180397|gb|EFZ65949.1| arginine decarboxylase [Escherichia coli 1180]
          Length = 658

 Score = 64.0 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            D+A++L+    L +   ++         +     + G      ++            ++
Sbjct: 207 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  I    G+A 
Sbjct: 327 S-VNYGLNEYANNIIWAIGDAC 347


>gi|238795139|ref|ZP_04638729.1| Biosynthetic arginine decarboxylase [Yersinia intermedia ATCC
           29909]
 gi|238725538|gb|EEQ17102.1| Biosynthetic arginine decarboxylase [Yersinia intermedia ATCC
           29909]
          Length = 654

 Score = 64.0 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/265 (12%), Positives = 76/265 (28%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 83  PALFCFPQILQHRLRSINGAFKRARESFGYEGDYFLVYPIKVNQHRRVIESLVNSGEPLG 142

Query: 55  TTSSSLYE--VMLGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E   +L H          N       I        L +   ++   +S++   
Sbjct: 143 LEAGSKAEMMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIKMV 202

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 203 LEEAERLNVVPRLGVRARLASQGSGKWQASGGEKSKFGLSATQVLQLVDMLRDANSLESL 262

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 263 QLLHFHLGSQLSNIRDISTGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 322

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  +    G+A   +
Sbjct: 323 S-VNYGLNEYANNVIWGIGDACNEH 346


>gi|168747572|ref|ZP_02772594.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4113]
 gi|168753888|ref|ZP_02778895.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4401]
 gi|168760078|ref|ZP_02785085.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4501]
 gi|168766943|ref|ZP_02791950.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4486]
 gi|168773425|ref|ZP_02798432.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4196]
 gi|168781795|ref|ZP_02806802.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4076]
 gi|168785794|ref|ZP_02810801.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC869]
 gi|168797511|ref|ZP_02822518.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC508]
 gi|170679666|ref|YP_001745100.1| arginine decarboxylase [Escherichia coli SMS-3-5]
 gi|191167952|ref|ZP_03029755.1| arginine decarboxylase [Escherichia coli B7A]
 gi|193063536|ref|ZP_03044625.1| arginine decarboxylase [Escherichia coli E22]
 gi|193067289|ref|ZP_03048257.1| arginine decarboxylase [Escherichia coli E110019]
 gi|194426452|ref|ZP_03059007.1| arginine decarboxylase [Escherichia coli B171]
 gi|194431602|ref|ZP_03063893.1| arginine decarboxylase [Shigella dysenteriae 1012]
 gi|194436698|ref|ZP_03068798.1| arginine decarboxylase [Escherichia coli 101-1]
 gi|195936560|ref|ZP_03081942.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4024]
 gi|208807010|ref|ZP_03249347.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4206]
 gi|208812448|ref|ZP_03253777.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4045]
 gi|208819119|ref|ZP_03259439.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4042]
 gi|209398776|ref|YP_002272418.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4115]
 gi|217327209|ref|ZP_03443292.1| arginine decarboxylase [Escherichia coli O157:H7 str. TW14588]
 gi|256019259|ref|ZP_05433124.1| arginine decarboxylase [Shigella sp. D9]
 gi|256024551|ref|ZP_05438416.1| arginine decarboxylase [Escherichia sp. 4_1_40B]
 gi|261226252|ref|ZP_05940533.1| biosynthetic arginine decarboxylase, PLP-binding protein
           [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256491|ref|ZP_05949024.1| biosynthetic arginine decarboxylase SpeA, PLP-binding protein
           [Escherichia coli O157:H7 str. FRIK966]
 gi|301027741|ref|ZP_07191048.1| arginine decarboxylase [Escherichia coli MS 196-1]
 gi|306812157|ref|ZP_07446355.1| arginine decarboxylase [Escherichia coli NC101]
 gi|312972822|ref|ZP_07786995.1| arginine decarboxylase [Escherichia coli 1827-70]
 gi|331669681|ref|ZP_08370527.1| arginine 2-monooxygenase [Escherichia coli TA271]
 gi|226732564|sp|B5YQD6|SPEA_ECO5E RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|226732565|sp|B1LDE8|SPEA_ECOSM RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|170517384|gb|ACB15562.1| arginine decarboxylase [Escherichia coli SMS-3-5]
 gi|187770953|gb|EDU34797.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4196]
 gi|188017820|gb|EDU55942.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4113]
 gi|189000561|gb|EDU69547.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4076]
 gi|189358378|gb|EDU76797.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4401]
 gi|189363682|gb|EDU82101.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4486]
 gi|189369222|gb|EDU87638.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4501]
 gi|189374158|gb|EDU92574.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC869]
 gi|189379697|gb|EDU98113.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC508]
 gi|190902037|gb|EDV61783.1| arginine decarboxylase [Escherichia coli B7A]
 gi|192930813|gb|EDV83418.1| arginine decarboxylase [Escherichia coli E22]
 gi|192959246|gb|EDV89681.1| arginine decarboxylase [Escherichia coli E110019]
 gi|194415760|gb|EDX32027.1| arginine decarboxylase [Escherichia coli B171]
 gi|194419958|gb|EDX36036.1| arginine decarboxylase [Shigella dysenteriae 1012]
 gi|194424180|gb|EDX40167.1| arginine decarboxylase [Escherichia coli 101-1]
 gi|208726811|gb|EDZ76412.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4206]
 gi|208733725|gb|EDZ82412.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4045]
 gi|208739242|gb|EDZ86924.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4042]
 gi|209160176|gb|ACI37609.1| arginine decarboxylase [Escherichia coli O157:H7 str. EC4115]
 gi|217319576|gb|EEC28001.1| arginine decarboxylase [Escherichia coli O157:H7 str. TW14588]
 gi|299879138|gb|EFI87349.1| arginine decarboxylase [Escherichia coli MS 196-1]
 gi|305854195|gb|EFM54633.1| arginine decarboxylase [Escherichia coli NC101]
 gi|307625487|gb|ADN69791.1| arginine decarboxylase [Escherichia coli UM146]
 gi|310332764|gb|EFP99977.1| arginine decarboxylase [Escherichia coli 1827-70]
 gi|320174065|gb|EFW49235.1| Biosynthetic arginine decarboxylase [Shigella dysenteriae CDC
           74-1112]
 gi|320182149|gb|EFW57052.1| Biosynthetic arginine decarboxylase [Shigella boydii ATCC 9905]
 gi|320184286|gb|EFW59098.1| Biosynthetic arginine decarboxylase [Shigella flexneri CDC 796-83]
 gi|320189286|gb|EFW63945.1| Biosynthetic arginine decarboxylase [Escherichia coli O157:H7 str.
           EC1212]
 gi|320195056|gb|EFW69685.1| Biosynthetic arginine decarboxylase [Escherichia coli WV_060327]
 gi|320202602|gb|EFW77172.1| Biosynthetic arginine decarboxylase [Escherichia coli EC4100B]
 gi|320640585|gb|EFX10124.1| arginine decarboxylase [Escherichia coli O157:H7 str. G5101]
 gi|320645832|gb|EFX14817.1| arginine decarboxylase [Escherichia coli O157:H- str. 493-89]
 gi|320651132|gb|EFX19572.1| arginine decarboxylase [Escherichia coli O157:H- str. H 2687]
 gi|320656628|gb|EFX24524.1| arginine decarboxylase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320662147|gb|EFX29548.1| arginine decarboxylase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320667223|gb|EFX34186.1| arginine decarboxylase [Escherichia coli O157:H7 str. LSU-61]
 gi|323154646|gb|EFZ40845.1| arginine decarboxylase [Escherichia coli EPECa14]
 gi|323168009|gb|EFZ53698.1| arginine decarboxylase [Shigella sonnei 53G]
 gi|323173849|gb|EFZ59478.1| arginine decarboxylase [Escherichia coli LT-68]
 gi|326338974|gb|EGD62789.1| Biosynthetic arginine decarboxylase [Escherichia coli O157:H7 str.
           1044]
 gi|326343145|gb|EGD66913.1| Biosynthetic arginine decarboxylase [Escherichia coli O157:H7 str.
           1125]
 gi|330908972|gb|EGH37486.1| biosynthetic arginine decarboxylase [Escherichia coli AA86]
 gi|331063349|gb|EGI35262.1| arginine 2-monooxygenase [Escherichia coli TA271]
 gi|332087630|gb|EGI92757.1| arginine decarboxylase [Shigella dysenteriae 155-74]
 gi|332091331|gb|EGI96419.1| arginine decarboxylase [Shigella boydii 3594-74]
 gi|332999685|gb|EGK19270.1| arginine decarboxylase [Shigella flexneri VA-6]
 gi|333000598|gb|EGK20176.1| arginine decarboxylase [Shigella flexneri K-272]
 gi|333015279|gb|EGK34621.1| arginine decarboxylase [Shigella flexneri K-227]
          Length = 632

 Score = 64.0 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 61  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 120

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 121 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 180

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            D+A++L+    L +   ++         +     + G      ++            ++
Sbjct: 181 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 240

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 241 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 300

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  I    G+A 
Sbjct: 301 S-VNYGLNEYANNIIWAIGDAC 321


>gi|110806847|ref|YP_690367.1| arginine decarboxylase [Shigella flexneri 5 str. 8401]
 gi|123342531|sp|Q0T0V3|SPEA_SHIF8 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|110616395|gb|ABF05062.1| biosynthetic arginine decarboxylase [Shigella flexneri 5 str. 8401]
 gi|313647989|gb|EFS12435.1| arginine decarboxylase [Shigella flexneri 2a str. 2457T]
 gi|332753782|gb|EGJ84161.1| arginine decarboxylase [Shigella flexneri K-671]
 gi|332754356|gb|EGJ84722.1| arginine decarboxylase [Shigella flexneri 2747-71]
 gi|332765356|gb|EGJ95574.1| arginine decarboxylase [Shigella flexneri 2930-71]
 gi|332999966|gb|EGK19549.1| arginine decarboxylase [Shigella flexneri K-218]
 gi|333015076|gb|EGK34419.1| arginine decarboxylase [Shigella flexneri K-304]
          Length = 632

 Score = 64.0 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 61  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 120

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 121 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 180

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            D+A++L+    L +   ++         +     + G      ++            ++
Sbjct: 181 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 240

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 241 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 300

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  I    G+A 
Sbjct: 301 S-VNYGLNEYANNIIWAIGDAC 321


>gi|15676379|ref|NP_273515.1| arginine decarboxylase [Neisseria meningitidis MC58]
 gi|48474973|sp|Q9K0U3|SPEA_NEIMB RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|7225695|gb|AAF40905.1| biosynthetic arginine decarboxylase [Neisseria meningitidis MC58]
 gi|316984747|gb|EFV63706.1| arginine decarboxylase [Neisseria meningitidis H44/76]
 gi|325140888|gb|EGC63397.1| arginine decarboxylase [Neisseria meningitidis CU385]
 gi|325199653|gb|ADY95108.1| arginine decarboxylase [Neisseria meningitidis H44/76]
          Length = 630

 Score = 64.0 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 68/265 (25%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L       + A        G  L+  +K      + ++L       G
Sbjct: 59  PVLFCFPQILEHRLRDINRAFQTAREECGYKGGYCLVYPIKVNQHRRVIESLMSSGQPHG 118

Query: 55  TTSSSLYEVMLGHEKFGGET-HAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
             + S  E+M      G          YKD E        + +       + K  +    
Sbjct: 119 LEAGSKAELMAVLAHAGNRQTLIVCNGYKDREYIRFALMGEKLGHQVYLVIEKLSEIQMV 178

Query: 114 LHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNV 158
           L +   L I P         S             S+ G      ++             +
Sbjct: 179 LEEAEKLGIKPRLGVRARLASQGSGKWQSSGGEKSKFGLSASQVLQLVDILKQKNRLDCL 238

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I    +GGG+    +    +  C
Sbjct: 239 QLLHFHLGSQLGNIRDVATGVHESARFYVELHKLGVNIRCFDVGGGLGVDYEGNRTQSDC 298

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  +     +A + +
Sbjct: 299 S-VNYSLNEYAATVVWGISQACLEH 322


>gi|332086867|gb|EGI92003.1| arginine decarboxylase [Shigella boydii 5216-82]
          Length = 632

 Score = 64.0 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 61  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 120

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 121 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 180

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            D+A++L+    L +   ++         +     + G      ++            ++
Sbjct: 181 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 240

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 241 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 300

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  I    G+A 
Sbjct: 301 S-VNYGLNEYANNIIWAIGDAC 321


>gi|226328786|ref|ZP_03804304.1| hypothetical protein PROPEN_02686 [Proteus penneri ATCC 35198]
 gi|225201972|gb|EEG84326.1| hypothetical protein PROPEN_02686 [Proteus penneri ATCC 35198]
          Length = 51

 Score = 64.0 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 4/40 (10%), Positives = 10/40 (25%)

Query: 320 FEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
             D   Y  +  + +N   +    +          R  + 
Sbjct: 2   IHDTGAYGASMSSNYNSRPLIPEVLITEGVPQLIRRRQTI 41


>gi|311278144|ref|YP_003940375.1| arginine decarboxylase [Enterobacter cloacae SCF1]
 gi|308747339|gb|ADO47091.1| arginine decarboxylase [Enterobacter cloacae SCF1]
          Length = 658

 Score = 64.0 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEVAIV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 207 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVEILREHGRLDSI 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  I    G+A   +
Sbjct: 327 S-VNYGLNEYANNIIWAIGDACEEH 350


>gi|224584879|ref|YP_002638677.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|224469406|gb|ACN47236.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
          Length = 652

 Score = 64.0 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 81  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 140

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 141 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 200

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 201 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRDAGRLDSL 260

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 261 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 320

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  I    G+A   +
Sbjct: 321 S-VNYGLNEYANNIIWAIGDACEEH 344


>gi|113474916|ref|YP_720977.1| arginine decarboxylase [Trichodesmium erythraeum IMS101]
 gi|110165964|gb|ABG50504.1| arginine decarboxylase [Trichodesmium erythraeum IMS101]
          Length = 693

 Score = 64.0 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 44/335 (13%), Positives = 105/335 (31%), Gaps = 49/335 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVK-----LL---LALKCFAAWGMFDTLNQYM---- 52
           P  +     L + ++        A  +     +      +KC     + + + ++     
Sbjct: 98  PLIIRFSDILEDRIERLNACFSKAIARYKYKNIYRGVFPVKCNQNSHLVEEVVKFGKPHK 157

Query: 53  DGTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLN 105
            G  + S  E+++        +       YKD E                I+   V ++ 
Sbjct: 158 FGLEAGSKPELLIAIATLNTTDGLIICNGYKDREYIETAILAQRLGKIPIIVIEQVEEVQ 217

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK-------- 156
              + ++KL+ K  + I   +S               + G    + I+   +        
Sbjct: 218 LVIEASRKLNIKPVVGIRVKLSTKGMGRWAGTTGDRAKFGLNIPEIIKVVNQLKSTGILD 277

Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTD------- 206
           ++  L FH   +  S       ++   +   E       ++++ +GGG+           
Sbjct: 278 SLQLLHFHIGSQISSISVIKDAIREASQIYVELAQLGANMKYLDVGGGLAVDYDGSKSNF 337

Query: 207 ---KDYPVKDFCQRLKEFSEK-------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
              K+Y ++++   +    ++           +  E G A+ ++ + L   VL +S+  K
Sbjct: 338 YASKNYDMQNYANDIVAEVKEACEEKNILPPILISESGRAVASHQSVLVFDVLGVSQIPK 397

Query: 257 NLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAM 291
               V    E  +    LY+   +I  +       
Sbjct: 398 EEPPVIGKGEHLILQ-NLYETYQSINKDNYQEAYH 431


>gi|16130839|ref|NP_417413.1| biosynthetic arginine decarboxylase, PLP-binding [Escherichia coli
           str. K-12 substr. MG1655]
 gi|89109715|ref|AP_003495.1| biosynthetic arginine decarboxylase, PLP-binding [Escherichia coli
           str. K-12 substr. W3110]
 gi|170082492|ref|YP_001731812.1| biosynthetic arginine decarboxylase, PLP-binding [Escherichia coli
           str. K-12 substr. DH10B]
 gi|188496429|ref|ZP_03003699.1| arginine decarboxylase [Escherichia coli 53638]
 gi|238902060|ref|YP_002927856.1| biosynthetic arginine decarboxylase, PLP-binding [Escherichia coli
           BW2952]
 gi|253772222|ref|YP_003035053.1| arginine decarboxylase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254162848|ref|YP_003045956.1| arginine decarboxylase [Escherichia coli B str. REL606]
 gi|300921274|ref|ZP_07137646.1| arginine decarboxylase [Escherichia coli MS 115-1]
 gi|300947666|ref|ZP_07161836.1| arginine decarboxylase [Escherichia coli MS 116-1]
 gi|300954217|ref|ZP_07166682.1| arginine decarboxylase [Escherichia coli MS 175-1]
 gi|301643710|ref|ZP_07243749.1| arginine decarboxylase [Escherichia coli MS 146-1]
 gi|331643631|ref|ZP_08344762.1| arginine 2-monooxygenase [Escherichia coli H736]
 gi|34395944|sp|P21170|SPEA_ECOLI RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|882467|gb|AAA69105.1| CG Site No. 161 [Escherichia coli str. K-12 substr. MG1655]
 gi|1789307|gb|AAC75975.1| biosynthetic arginine decarboxylase, PLP-binding [Escherichia coli
           str. K-12 substr. MG1655]
 gi|85675748|dbj|BAE77001.1| biosynthetic arginine decarboxylase, PLP-binding [Escherichia coli
           str. K12 substr. W3110]
 gi|169890327|gb|ACB04034.1| biosynthetic arginine decarboxylase, PLP-binding [Escherichia coli
           str. K-12 substr. DH10B]
 gi|188491628|gb|EDU66731.1| arginine decarboxylase [Escherichia coli 53638]
 gi|238860090|gb|ACR62088.1| biosynthetic arginine decarboxylase, PLP-binding [Escherichia coli
           BW2952]
 gi|242378464|emb|CAQ33248.1| arginine decarboxylase, biosynthetic [Escherichia coli BL21(DE3)]
 gi|253323266|gb|ACT27868.1| arginine decarboxylase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253974749|gb|ACT40420.1| arginine decarboxylase [Escherichia coli B str. REL606]
 gi|253978915|gb|ACT44585.1| arginine decarboxylase [Escherichia coli BL21(DE3)]
 gi|260448018|gb|ACX38440.1| arginine decarboxylase [Escherichia coli DH1]
 gi|284922883|emb|CBG35972.1| biosynthetic arginine decarboxylase [Escherichia coli 042]
 gi|300318801|gb|EFJ68585.1| arginine decarboxylase [Escherichia coli MS 175-1]
 gi|300411816|gb|EFJ95126.1| arginine decarboxylase [Escherichia coli MS 115-1]
 gi|300452781|gb|EFK16401.1| arginine decarboxylase [Escherichia coli MS 116-1]
 gi|301077912|gb|EFK92718.1| arginine decarboxylase [Escherichia coli MS 146-1]
 gi|309703295|emb|CBJ02631.1| biosynthetic arginine decarboxylase [Escherichia coli ETEC H10407]
 gi|323936056|gb|EGB32351.1| arginine decarboxylase [Escherichia coli E1520]
 gi|323960767|gb|EGB56388.1| arginine decarboxylase [Escherichia coli H489]
 gi|323971712|gb|EGB66940.1| arginine decarboxylase [Escherichia coli TA007]
 gi|331037102|gb|EGI09326.1| arginine 2-monooxygenase [Escherichia coli H736]
          Length = 658

 Score = 64.0 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            D+A++L+    L +   ++         +     + G      ++            ++
Sbjct: 207 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  I    G+A 
Sbjct: 327 S-VNYGLNEYANNIIWAIGDAC 347


>gi|121635391|ref|YP_975636.1| arginine decarboxylase [Neisseria meningitidis FAM18]
 gi|161870605|ref|YP_001599778.1| arginine decarboxylase [Neisseria meningitidis 053442]
 gi|120867097|emb|CAM10863.1| biosynthetic arginine decarboxylase [Neisseria meningitidis FAM18]
 gi|161596158|gb|ABX73818.1| biosynthetic arginine decarboxylase [Neisseria meningitidis 053442]
 gi|325132856|gb|EGC55535.1| arginine decarboxylase [Neisseria meningitidis M6190]
 gi|325138836|gb|EGC61387.1| arginine decarboxylase [Neisseria meningitidis ES14902]
          Length = 630

 Score = 64.0 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 38/265 (14%), Positives = 70/265 (26%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L       + A        G  L+  +K      + ++L       G
Sbjct: 59  PVLFCFPQILEHRLRDINRAFQTAREECGYKGGYCLVYPIKVNQHRRVIESLMSSGQPHG 118

Query: 55  TTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
             + S  E+M      G  +T      YKD E        + +       + K  +    
Sbjct: 119 LEAGSKAELMAVLAHAGTRQTLIVCNGYKDREYIRFALMGEKLGHQVYLVIEKLSEIQMV 178

Query: 114 LHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNV 158
           L +   L I P         S             S+ G      ++             +
Sbjct: 179 LEEAEKLGIKPRLGVRARLASQGSGKWQSSGGEKSKFGLSASQVLQLVDILKQKNRLDCL 238

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I    +GGG+    +    +  C
Sbjct: 239 QLLHFHLGSQLGNIRDVATGVHESARFYVELHKLGVNIRCFDVGGGLGVDYEGNRTQSDC 298

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  +     +A + +
Sbjct: 299 S-VNYSLNEYASTVVWGISQACLEH 322


>gi|293416201|ref|ZP_06658841.1| arginine decarboxylase [Escherichia coli B185]
 gi|291432390|gb|EFF05372.1| arginine decarboxylase [Escherichia coli B185]
          Length = 632

 Score = 64.0 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 61  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 120

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 121 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 180

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            D+A++L+    L +   ++         +     + G      ++            ++
Sbjct: 181 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 240

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 241 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 300

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  I    G+A 
Sbjct: 301 S-VNYGLNEYANNIIWAIGDAC 321


>gi|301119305|ref|XP_002907380.1| ornithine decarboxylase, putative [Phytophthora infestans T30-4]
 gi|262105892|gb|EEY63944.1| ornithine decarboxylase, putative [Phytophthora infestans T30-4]
          Length = 298

 Score = 64.0 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 51/283 (18%), Positives = 93/283 (32%), Gaps = 22/283 (7%)

Query: 82  KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS 141
           +     A   N    +F+++ +L K K   +    K+ LR+    S ++           
Sbjct: 4   RSHLRFAREHNVPLTVFDSMDELVKIKR--EFPEAKLVLRLQVDDSKARHQFGPKFGTPM 61

Query: 142 RLGEKCKDKIESEIKNVNGLMFHNNC-------ENKSFLCFSAMLKNIEKEFGHFITQIE 194
                  +  +S+  NV G+ FH          E  +F+      K       +   +  
Sbjct: 62  ADVPALLETAKSQELNVIGVCFHVGVGVGVGVLEASAFVDAIERAKQAFTMGLNAGYKFT 121

Query: 195 WISLGGGIHFTDKDYPVKDFCQ------RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248
            ++LGGG    D      +           + F E   V+I  EPG   V+   TL+  V
Sbjct: 122 LLNLGGGFAGDDLGPVTFEAAARAINGVLDQLFPESSGVKIISEPGRYFVSACATLSVNV 181

Query: 249 LD--ISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCL---AGDIF 303
           +   +   +       +   A +P Y+           + P+  +V     L     D  
Sbjct: 182 IGRKVDPELTVSAQSSAEGNADLPRYMYVVNDGRHGSFSTPHLCVVSTPVVLKTANAD-- 239

Query: 304 GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
                   V +GD I+F  +  Y+    + FNG ++       
Sbjct: 240 ESKAVPCSVWVGDWIAFPSMGAYSFATGSTFNGFSLHGELRVK 282


>gi|24114195|ref|NP_708705.1| arginine decarboxylase [Shigella flexneri 2a str. 301]
 gi|24053340|gb|AAN44412.1| biosynthetic arginine decarboxylase [Shigella flexneri 2a str. 301]
          Length = 668

 Score = 64.0 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 91  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 150

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 151 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 210

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            D+A++L+    L +   ++         +     + G      ++            ++
Sbjct: 211 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 270

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 271 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 330

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  I    G+A 
Sbjct: 331 S-VNYGLNEYANNIIWAIGDAC 351


>gi|323978765|gb|EGB73846.1| arginine decarboxylase [Escherichia coli TW10509]
          Length = 658

 Score = 64.0 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            D+A++L+    L +   ++         +     + G      ++            ++
Sbjct: 207 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  I    G+A 
Sbjct: 327 S-VNYGLNEYANNIIWAIGDAC 347


>gi|307139624|ref|ZP_07498980.1| arginine decarboxylase [Escherichia coli H736]
 gi|315137535|dbj|BAJ44694.1| arginine decarboxylase [Escherichia coli DH1]
 gi|332344837|gb|AEE58171.1| arginine decarboxylase SpeA [Escherichia coli UMNK88]
          Length = 632

 Score = 64.0 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 61  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 120

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 121 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 180

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            D+A++L+    L +   ++         +     + G      ++            ++
Sbjct: 181 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 240

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 241 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 300

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  I    G+A 
Sbjct: 301 S-VNYGLNEYANNIIWAIGDAC 321


>gi|281602275|gb|ADA75259.1| Biosynthetic arginine decarboxylase [Shigella flexneri 2002017]
          Length = 662

 Score = 64.0 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 91  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 150

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 151 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 210

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            D+A++L+    L +   ++         +     + G      ++            ++
Sbjct: 211 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 270

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 271 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 330

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  I    G+A 
Sbjct: 331 S-VNYGLNEYANNIIWAIGDAC 351


>gi|26249359|ref|NP_755399.1| arginine decarboxylase [Escherichia coli CFT073]
 gi|91212320|ref|YP_542306.1| arginine decarboxylase [Escherichia coli UTI89]
 gi|237706410|ref|ZP_04536891.1| biosynthetic arginine decarboxylase [Escherichia sp. 3_2_53FAA]
 gi|332280369|ref|ZP_08392782.1| biosynthetic arginine decarboxylase [Shigella sp. D9]
 gi|26109767|gb|AAN81972.1|AE016766_60 Biosynthetic arginine decarboxylase [Escherichia coli CFT073]
 gi|91073894|gb|ABE08775.1| biosynthetic arginine decarboxylase [Escherichia coli UTI89]
 gi|226899450|gb|EEH85709.1| biosynthetic arginine decarboxylase [Escherichia sp. 3_2_53FAA]
 gi|332102721|gb|EGJ06067.1| biosynthetic arginine decarboxylase [Shigella sp. D9]
          Length = 662

 Score = 64.0 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 91  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 150

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 151 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 210

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            D+A++L+    L +   ++         +     + G      ++            ++
Sbjct: 211 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 270

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 271 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 330

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  I    G+A 
Sbjct: 331 S-VNYGLNEYANNIIWAIGDAC 351


>gi|56415025|ref|YP_152100.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|56129282|gb|AAV78788.1| biosynthetic arginine decarboxylase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
          Length = 658

 Score = 64.0 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 207 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRDAGRLDSL 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  I    G+A   +
Sbjct: 327 S-VNYGLNEYANNIIWAIGDACEEH 350


>gi|16761862|ref|NP_457479.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Typhi str. CT18]
 gi|16766387|ref|NP_462002.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|29143349|ref|NP_806691.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
 gi|46397722|sp|P60658|SPEA_SALTI RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|48429148|sp|P60659|SPEA_SALTY RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|25290911|pir||AG0876 arginine decarboxylase (EC 4.1.1.19) - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16421639|gb|AAL21961.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|16504164|emb|CAD02911.1| biosynthetic arginine decarboxylase [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29138983|gb|AAO70551.1| biosynthetic arginine decarboxylase [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|320087519|emb|CBY97284.1| biosynthetic arginine decarboxylase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
          Length = 658

 Score = 64.0 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 207 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRDAGRLDSL 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  I    G+A   +
Sbjct: 327 S-VNYGLNEYANNIIWAIGDACEEH 350


>gi|170766054|ref|ZP_02900865.1| arginine decarboxylase [Escherichia albertii TW07627]
 gi|170125200|gb|EDS94131.1| arginine decarboxylase [Escherichia albertii TW07627]
          Length = 632

 Score = 64.0 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 61  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 120

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 121 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 180

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            D+A++L+    L +   ++         +     + G      ++            ++
Sbjct: 181 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 240

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 241 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 300

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  I    G+A 
Sbjct: 301 S-VNYGLNEYANNIIWAIGDAC 321


>gi|197119288|ref|YP_002139715.1| arginine decarboxylase [Geobacter bemidjiensis Bem]
 gi|226732566|sp|B5EIW4|SPEA_GEOBB RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|197088648|gb|ACH39919.1| biosynthetic arginine decarboxylase [Geobacter bemidjiensis Bem]
          Length = 635

 Score = 63.6 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/297 (12%), Positives = 88/297 (29%), Gaps = 38/297 (12%)

Query: 12  QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
             L   + +   + KNA          +    +K      + + +  +      G    S
Sbjct: 67  NILEGRIASISRVFKNAISDNNYPAKYQTFYPIKVNQQRQVVEAIANFGKKYNIGLEVGS 126

Query: 60  LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112
             E++       G         YKD E          +    TI+   + +L K  + ++
Sbjct: 127 KPELVAAISMSTGNNLPILCNGYKDTEFIETVLFATRVGYDITIVVEKLFELEKIVEVSK 186

Query: 113 KLHKKIGLRINPSVSYSKFILADPN-RPFSRLGEKCKDKIESEIK--------NVNGLMF 163
           +      L I   +S         +    ++ G +  + I +           +V  L F
Sbjct: 187 RTGIVPKLGIRVKLSSKGIGKWSTSGGDDAKFGLRISELIAAIDMLKQNDMLDSVKLLHF 246

Query: 164 HNNCENKSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
           H   +          L    + +         +E++ +GGG+           +   +  
Sbjct: 247 HVGSQITKIDKIKNALIEGTRIYAEMRKLGVNLEFLDIGGGLGVDYDG-SKSSYFSSVNY 305

Query: 221 FSEKYSVQIYLEPGEAI------VTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPD 271
             E+Y+  +  +             N  + +        ++    +++++ +  +PD
Sbjct: 306 SLEEYANDVIYQVKNICDDAGVPCPNIISESGRATVAHYSVLVTDVLNNNTQTLMPD 362


>gi|254238439|ref|ZP_04931762.1| biosynthetic arginine decarboxylase [Pseudomonas aeruginosa C3719]
 gi|126170370|gb|EAZ55881.1| biosynthetic arginine decarboxylase [Pseudomonas aeruginosa C3719]
          Length = 636

 Score = 63.6 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 39/298 (13%), Positives = 80/298 (26%), Gaps = 46/298 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53
           P  +     L + +                      L  +K      + +  +       
Sbjct: 70  PLLVRFPDILQDRVRKLTGAFDANIERLEYQNRYTALYPIKVNQQEAVVENIIATENVSI 129

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106
           G  + S  E+M                YKD E   +      +  N    + K       
Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIKLALMGQKLGHNVFIVIEKESEVQLV 189

Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158
            ++ A    +          S +    AD     ++ G      +            + V
Sbjct: 190 IEEAANVGVQPQVGLRVRLSSLASSKWADTGGEKAKFGLSAAQLLSVVERFRQAGLDQGV 249

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207
             L FH   +  +   +    K   + +G        ++ I +GGG+             
Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYGELRALGLPVDHIDVGGGLGVDYDGTHSRNAS 309

Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
             +Y + D+   +    +++          I+ E G A+  +   L T V D+  +  
Sbjct: 310 SINYDIDDYAGVVVGMLKEFCDAQGLPHPHIFSESGRALTAHHAVLITQVTDVERHND 367


>gi|238798629|ref|ZP_04642104.1| Biosynthetic arginine decarboxylase [Yersinia mollaretii ATCC
           43969]
 gi|238717515|gb|EEQ09356.1| Biosynthetic arginine decarboxylase [Yersinia mollaretii ATCC
           43969]
          Length = 659

 Score = 63.6 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/265 (12%), Positives = 76/265 (28%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 88  PALFCFPQILQHRLRSINGAFKRARESFGYEGDYFLVYPIKVNQHRRVIESLVSSGEPLG 147

Query: 55  TTSSSLYE--VMLGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E   +L H          N       I        L +   ++   +S++   
Sbjct: 148 LEAGSKAEMMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIKMV 207

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 208 LEEAERLNVVPRLGVRARLASQGSGKWQASGGEKSKFGLSATQVLQLVDMLREANSLDSL 267

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 268 QLLHFHLGSQLSNIRDISTGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 327

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  +    G+A   +
Sbjct: 328 S-VNYGLNEYANNVIWGIGDACNEH 351



 Score = 36.3 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 26/204 (12%), Positives = 60/204 (29%), Gaps = 23/204 (11%)

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
           E+              +    ++   +       +H     Y         + ++E+  +
Sbjct: 400 ESLWDTWLEMQEPENRRSLREWLHDSQM-----DLHDVHTQYAHGMLELAQRAWAEELYL 454

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG- 286
            I  E  + +  +       + ++ E + + + V+ S+   +PD     +   + P  G 
Sbjct: 455 SICNEIQKQLDPSNRAHRPIIDELQERMADKLYVNFSLFQSMPDAWGIDQLFPVLPLEGL 514

Query: 287 ----PYTAMVCGRSCLA---------GDIFGEFHFEKPVKIGD--RISFEDVAGYNINRK 331
                  A++   +C +         GD         P    +   + F  V  Y     
Sbjct: 515 DKPPERRAVLLDITCDSDGTIDHYIDGDGVATTMPMPPYDAENPPLLGFFMVGAYQEILG 574

Query: 332 NWFNGIN-MPTI-AVKNVDGTIKA 353
           N  N       +      DGT++ 
Sbjct: 575 NMHNLFGDTAAVDVYVFPDGTVEV 598


>gi|238785650|ref|ZP_04629627.1| Biosynthetic arginine decarboxylase [Yersinia bercovieri ATCC
           43970]
 gi|238713429|gb|EEQ05464.1| Biosynthetic arginine decarboxylase [Yersinia bercovieri ATCC
           43970]
          Length = 659

 Score = 63.6 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/265 (12%), Positives = 76/265 (28%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 88  PALFCFPQILQHRLRSINGAFKRARESFGYEGDYFLVYPIKVNQHRRVIESLVSSGEPLG 147

Query: 55  TTSSSLYE--VMLGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E   +L H          N       I        L +   ++   +S++   
Sbjct: 148 LEAGSKAEMMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIKMV 207

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 208 LEEAERLNVVPRLGVRARLASQGSGKWQASGGEKSKFGLSATQVLQLVDMLREANSLESL 267

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 268 QLLHFHLGSQLSNIRDISTGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 327

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  +    G+A   +
Sbjct: 328 S-VNYGLNEYANNVIWGIGDACNEH 351



 Score = 36.3 bits (82), Expect = 6.9,   Method: Composition-based stats.
 Identities = 26/204 (12%), Positives = 60/204 (29%), Gaps = 23/204 (11%)

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
           E+              +    ++   +       +H     Y         + ++E+  +
Sbjct: 400 ESLWDTWLEMQEPENRRSLREWLHDSQM-----DLHDVHTQYAHGMLELAQRAWAEELYL 454

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG- 286
            I  E  + +  +       + ++ E + + + V+ S+   +PD     +   + P  G 
Sbjct: 455 SICNEIQKQLDPSNRAHRPIIDELQERMADKLYVNFSLFQSMPDAWGIDQLFPVLPLEGL 514

Query: 287 ----PYTAMVCGRSCLA---------GDIFGEFHFEKPVKIGD--RISFEDVAGYNINRK 331
                  A++   +C +         GD         P    +   + F  V  Y     
Sbjct: 515 DKPPERRAVLLDITCDSDGTIDHYIDGDGVATTMPMPPYDAENPPLLGFFMVGAYQEILG 574

Query: 332 NWFNGIN-MPTI-AVKNVDGTIKA 353
           N  N       +      DGT++ 
Sbjct: 575 NMHNLFGDTAAVDVYVFPDGTVEV 598


>gi|323966456|gb|EGB61889.1| arginine decarboxylase [Escherichia coli M863]
          Length = 658

 Score = 63.6 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            D+A++L+    L +   ++         +     + G      ++            ++
Sbjct: 207 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  I    G+A 
Sbjct: 327 S-VNYGLNEYANNIIWAIGDAC 347


>gi|304386759|ref|ZP_07369027.1| arginine 2-monooxygenase [Neisseria meningitidis ATCC 13091]
 gi|304339159|gb|EFM05245.1| arginine 2-monooxygenase [Neisseria meningitidis ATCC 13091]
 gi|325128780|gb|EGC51642.1| arginine decarboxylase [Neisseria meningitidis N1568]
 gi|325130766|gb|EGC53501.1| arginine decarboxylase [Neisseria meningitidis OX99.30304]
 gi|325202725|gb|ADY98179.1| arginine decarboxylase [Neisseria meningitidis M01-240149]
 gi|325208721|gb|ADZ04173.1| arginine decarboxylase [Neisseria meningitidis NZ-05/33]
          Length = 630

 Score = 63.6 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 38/265 (14%), Positives = 70/265 (26%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L       + A        G  L+  +K      + ++L       G
Sbjct: 59  PVLFCFPQILEHRLRDINRAFQTAREECGYKGGYCLVYPIKVNQHRRVIESLMSSGQPHG 118

Query: 55  TTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
             + S  E+M      G  +T      YKD E        + +       + K  +    
Sbjct: 119 LEAGSKAELMAVLAHAGTRQTLIVCNGYKDREYIRFALMGEKLGHQVYLVIEKLSEIQMV 178

Query: 114 LHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNV 158
           L +   L I P         S             S+ G      ++             +
Sbjct: 179 LEEAEKLGIKPRLGVRARLASQGSGKWQSSGGEKSKFGLSASQVLQLVDILKQKNRLDCL 238

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I    +GGG+    +    +  C
Sbjct: 239 QLLHFHLGSQLGNIRDVATGVHESARFYVELHKLGVNIRCFDVGGGLGVDYEGNRTQSDC 298

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  +     +A + +
Sbjct: 299 S-VNYSLNEYAATVVWGISQACLEH 322


>gi|123366942|ref|XP_001296836.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain
           containing protein [Trichomonas vaginalis G3]
 gi|121876656|gb|EAX83906.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain
           containing protein [Trichomonas vaginalis G3]
          Length = 113

 Score = 63.6 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 27/65 (41%)

Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
                 + G++C + D+  E      +++GD ++ E    Y  +  ++FNG     +   
Sbjct: 48  ERVKTTLWGQTCDSADLVYEELLWPRLEVGDYLTIEKFGAYTYSPTSFFNGFPHHKVFHI 107

Query: 346 NVDGT 350
           N +  
Sbjct: 108 NEEDK 112


>gi|326629123|gb|EGE35466.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 9]
          Length = 658

 Score = 63.6 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 207 LEEAERLNVGPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRDAGRLDSL 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  I    G+A   +
Sbjct: 327 S-VNYGLNEYANNIIWAIGDACEEH 350


>gi|326624835|gb|EGE31180.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Dublin str. 3246]
          Length = 652

 Score = 63.6 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 81  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 140

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 141 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 200

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 201 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRDAGRLDSL 260

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 261 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 320

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  I    G+A   +
Sbjct: 321 S-VNYGLNEYANNIIWAIGDACEEH 344


>gi|294634881|ref|ZP_06713403.1| arginine 2-monooxygenase [Edwardsiella tarda ATCC 23685]
 gi|291091754|gb|EFE24315.1| arginine 2-monooxygenase [Edwardsiella tarda ATCC 23685]
          Length = 638

 Score = 63.6 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 79/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     + A           L+  +K      + ++L       G
Sbjct: 67  PALFCFPQILQHRLRSINAAFRRARASFGYQGDYFLVYPIKVNQQRRVIESLVNSGEPLG 126

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        L +   ++   +S+++  
Sbjct: 127 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKLSEIDLV 186

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIKNV 158
            ++AQ+L+    L +   ++         +     + G      +           ++++
Sbjct: 187 LEEAQRLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLSATQVLHLVETLRQAGHLESL 246

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 247 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 306

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  +    G+A   +
Sbjct: 307 S-VNYGLNEYANNVIWGIGDACNEH 330


>gi|254037986|ref|ZP_04872044.1| biosynthetic arginine decarboxylase [Escherichia sp. 1_1_43]
 gi|226839610|gb|EEH71631.1| biosynthetic arginine decarboxylase [Escherichia sp. 1_1_43]
          Length = 662

 Score = 63.6 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 91  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 150

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 151 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 210

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            D+A++L+    L +   ++         +     + G      ++            ++
Sbjct: 211 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 270

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 271 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 330

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  I    G+A 
Sbjct: 331 S-VNYGLNEYANNIIWAIGDAC 351


>gi|218768768|ref|YP_002343280.1| arginine decarboxylase [Neisseria meningitidis Z2491]
 gi|48474971|sp|Q9JT25|SPEA_NEIMA RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|121052776|emb|CAM09122.1| biosynthetic arginine decarboxylase [Neisseria meningitidis Z2491]
 gi|319411008|emb|CBY91406.1| biosynthetic arginine decarboxylase (ADC) [Neisseria meningitidis
           WUE 2594]
          Length = 630

 Score = 63.6 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 38/265 (14%), Positives = 70/265 (26%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L       + A        G  L+  +K      + ++L       G
Sbjct: 59  PVLFCFPQILEHRLRDINRAFQTAREECGYKGGYCLVYPIKVNQHRRVIESLMSSGQPHG 118

Query: 55  TTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
             + S  E+M      G  +T      YKD E        + +       + K  +    
Sbjct: 119 LEAGSKAELMAVLAHAGTRQTLIVCNGYKDREYIRFALMGEKLGHQVYLVIEKLSEIQMV 178

Query: 114 LHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNV 158
           L +   L I P         S             S+ G      ++             +
Sbjct: 179 LEEAEKLGIKPRLGVRARLASQGSGKWQSSGGEKSKFGLSASQVLQLVDILKQKNRLDCL 238

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I    +GGG+    +    +  C
Sbjct: 239 QLLHFHLGSQLGNIRDVATGVHESARFYVELHKLGVNIRCFDVGGGLGVDYEGNRTQSDC 298

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  +     +A + +
Sbjct: 299 S-VNYSLNEYAATVVWGISQACLEH 322


>gi|327251706|gb|EGE63392.1| arginine decarboxylase [Escherichia coli STEC_7v]
          Length = 632

 Score = 63.6 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 76/262 (29%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 61  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 120

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 121 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 180

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            D+A++L+    L +   ++         +     + G      ++            ++
Sbjct: 181 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 240

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 241 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 300

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  I    G+A 
Sbjct: 301 S-VNYGLNEYANNIIWAIGDAC 321


>gi|238752307|ref|ZP_04613786.1| Biosynthetic arginine decarboxylase [Yersinia rohdei ATCC 43380]
 gi|238709468|gb|EEQ01707.1| Biosynthetic arginine decarboxylase [Yersinia rohdei ATCC 43380]
          Length = 654

 Score = 63.6 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/265 (12%), Positives = 76/265 (28%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 83  PALFCFPQILQHRLRSINGAFKRARESFGYEGDYFLVYPIKVNQHRRVIESLVNSGEPLG 142

Query: 55  TTSSSLYE--VMLGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E   +L H          N       I        L +   ++   +S++   
Sbjct: 143 LEAGSKAEMMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIKMV 202

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 203 LEEAERLNVVPRLGVRARLASQGSGKWQASGGEKSKFGLSATQVLQLVDMLREANSLESL 262

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 263 QLLHFHLGSQLSNIRDISTGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 322

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  +    G+A   +
Sbjct: 323 S-VNYGLNEYANNVIWGIGDACNEH 346


>gi|254805504|ref|YP_003083725.1| biosynthetic arginine decarboxylase [Neisseria meningitidis
           alpha14]
 gi|254669046|emb|CBA07513.1| biosynthetic arginine decarboxylase [Neisseria meningitidis
           alpha14]
 gi|325134833|gb|EGC57469.1| arginine decarboxylase [Neisseria meningitidis M13399]
 gi|325145005|gb|EGC67288.1| arginine decarboxylase [Neisseria meningitidis M01-240013]
 gi|325203572|gb|ADY99025.1| arginine decarboxylase [Neisseria meningitidis M01-240355]
 gi|325205532|gb|ADZ00985.1| arginine decarboxylase [Neisseria meningitidis M04-240196]
          Length = 630

 Score = 63.6 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 38/265 (14%), Positives = 70/265 (26%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L       + A        G  L+  +K      + ++L       G
Sbjct: 59  PVLFCFPQILEHRLRDINRAFQTAREECGYKGGYCLVYPIKVNQHRRVIESLMSSGQPHG 118

Query: 55  TTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
             + S  E+M      G  +T      YKD E        + +       + K  +    
Sbjct: 119 LEAGSKAELMAVLAHAGTRQTLIVCNGYKDREYIRFALMGEKLGHQVYLVIEKLSEIQMV 178

Query: 114 LHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNV 158
           L +   L I P         S             S+ G      ++             +
Sbjct: 179 LEEAEKLGIKPRLGVRARLASQGSGKWQSSGGEKSKFGLSASQVLQLVDILKQKNRLDCL 238

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I    +GGG+    +    +  C
Sbjct: 239 QLLHFHLGSQLGNIRDVATGVHESARFYVELHKLGVNIRCFDVGGGLGVDYEGNRTQSDC 298

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  +     +A + +
Sbjct: 299 S-VNYSLNEYAATVVWGISQACLEH 322


>gi|238787356|ref|ZP_04631155.1| Biosynthetic arginine decarboxylase [Yersinia frederiksenii ATCC
           33641]
 gi|238724618|gb|EEQ16259.1| Biosynthetic arginine decarboxylase [Yersinia frederiksenii ATCC
           33641]
          Length = 659

 Score = 63.6 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/265 (12%), Positives = 76/265 (28%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 88  PALFCFPQILQHRLRSINGAFKRARESFGYEGDYFLVYPIKVNQHRRVIESLVNSGEPLG 147

Query: 55  TTSSSLYE--VMLGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E   +L H          N       I        L +   ++   +S++   
Sbjct: 148 LEAGSKAEMMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIKMV 207

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 208 LEEAERLNVVPRLGVRARLASQGSGKWQASGGEKSKFGLSATQVLQLVDMLREANSLESL 267

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 268 QLLHFHLGSQLSNIRDISTGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 327

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  +    G+A   +
Sbjct: 328 S-VNYGLNEYANNVIWGIGDACNEH 351


>gi|254672566|emb|CBA06206.1| biosynthetic arginine decarboxylase [Neisseria meningitidis
           alpha275]
 gi|325136854|gb|EGC59452.1| arginine decarboxylase [Neisseria meningitidis M0579]
 gi|325142902|gb|EGC65264.1| arginine decarboxylase [Neisseria meningitidis 961-5945]
 gi|325198850|gb|ADY94306.1| arginine decarboxylase [Neisseria meningitidis G2136]
          Length = 630

 Score = 63.6 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 38/265 (14%), Positives = 70/265 (26%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L       + A        G  L+  +K      + ++L       G
Sbjct: 59  PVLFCFPQILEHRLRDINRAFQTAREECGYKGGYCLVYPIKVNQHRRVIESLMSSGQPHG 118

Query: 55  TTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
             + S  E+M      G  +T      YKD E        + +       + K  +    
Sbjct: 119 LEAGSKAELMAVLAHAGTRQTLIVCNGYKDREYIRFALMGEKLGHQVYLVIEKLSEIQMV 178

Query: 114 LHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNV 158
           L +   L I P         S             S+ G      ++             +
Sbjct: 179 LEEAEKLGIKPRLGVRARLASQGSGKWQSSGGEKSKFGLSASQVLQLVDILKQKNRLDCL 238

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I    +GGG+    +    +  C
Sbjct: 239 QLLHFHLGSQLGNIRDVATGVHESARFYVELHKLGVNIRCFDVGGGLGVDYEGNRTQSDC 298

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  +     +A + +
Sbjct: 299 S-VNYSLNEYAATVVWGISQACLEH 322


>gi|302205761|gb|ADL10103.1| Putative ornithine decarboxylase [Corynebacterium
           pseudotuberculosis C231]
 gi|308275995|gb|ADO25894.1| Putative ornithine decarboxylase [Corynebacterium
           pseudotuberculosis I19]
          Length = 452

 Score = 63.6 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 55/402 (13%), Positives = 97/402 (24%), Gaps = 65/402 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQY-----MDGTTS 57
           P++++  Q   +     L    + G+   L    K   A      L          G   
Sbjct: 34  PFHVLYPQNFTDTARLWLDTAADTGITFGLRFGKKSNKAGCFARNLADLYAQGNNAGIDV 93

Query: 58  SSLYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLH 115
           +S  E+         GE           E+  + S     I  +    ++        + 
Sbjct: 94  ASTDELRAALCAGLPGEQLVVTGPTPTAELIRLASYHGSLITISRPEDIDVIAGTIYNIK 153

Query: 116 KKIGLRINPSVSYSKFILADPNRPFS---------------------------------- 141
               LRI   +S                                                
Sbjct: 154 PTKSLRILLRLSSDGVHTRFGMSLEQSYAVAQTLESGRYQDLPLDIAGVSFHCNGYDLDE 213

Query: 142 --RLGEKCKDKIESEIKNVN------GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQI 193
             R+  K  D +    +  +      G  F  +  +                    +   
Sbjct: 214 RIRMAHKATDAVLKLREWSSASIVSIGGGFPTSSISPELWNAVTEQLTPSMFVTGRVPGD 273

Query: 194 EWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE 253
           ++             Y +      LK+ +  + + I  EPG ++          VL   E
Sbjct: 274 QYPFAANCAGAEALRYILTQGTTSLKDKAISHGITILAEPGRSLCQAAGASYFPVLSCHE 333

Query: 254 NIKNLVIVDSSV------EAHVPDYLLYQESATIYPNT-----GPYTAMVCGRSCLAGDI 302
                  V               D   Y +   I          P  + V G +CL  D 
Sbjct: 334 LPNTEGNVTVVEGTSLSLSEQWFDSEYYPDPYLIRAGKILSQGNPTDSAVAGSTCLDSDY 393

Query: 303 FGEF--HFEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPT 341
                  F    + GD + + D AGY ++   + F+G   P 
Sbjct: 394 LSRRFIRFPDRPQPGDILVYPDTAGYQMDSNESSFHGKEPPK 435


>gi|300858040|ref|YP_003783023.1| ornithine decarboxylase [Corynebacterium pseudotuberculosis FRC41]
 gi|300685494|gb|ADK28416.1| ornithine decarboxylase [Corynebacterium pseudotuberculosis FRC41]
 gi|302330319|gb|ADL20513.1| Putative ornithine decarboxylase [Corynebacterium
           pseudotuberculosis 1002]
          Length = 452

 Score = 63.6 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 55/402 (13%), Positives = 97/402 (24%), Gaps = 65/402 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQY-----MDGTTS 57
           P++++  Q   +     L    + G+   L    K   A      L          G   
Sbjct: 34  PFHVLYPQNFTDTARLWLDTAADTGITFGLRFGKKSNKAGCFARNLADLYAQGNNAGIDV 93

Query: 58  SSLYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLH 115
           +S  E+         GE           E+  + S     I  +    ++        + 
Sbjct: 94  ASTDELRAALCAGLPGEQLVVTGPTPTAELIRLASYHGSLITISRPEDIDVIAGTIYNIK 153

Query: 116 KKIGLRINPSVSYSKFILADPNRPFS---------------------------------- 141
               LRI   +S                                                
Sbjct: 154 PTKSLRILLRLSSDGVHTRFGMSLEQSYAVAQTLESGRYQDLPLDIAGVSFHCNGYDLDE 213

Query: 142 --RLGEKCKDKIESEIKNVN------GLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQI 193
             R+  K  D +    +  +      G  F  +  +                    +   
Sbjct: 214 RIRMAHKATDAVLKLREWSSASIVSIGGGFPTSSISPELWNAVTEQLTPSMFVTGRVPGD 273

Query: 194 EWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE 253
           ++             Y +      LK+ +  + + I  EPG ++          VL   E
Sbjct: 274 QYPFAANCAGAEALRYILTQGTTSLKDKAISHGITILAEPGRSLCQAAGASYFPVLSCHE 333

Query: 254 NIKNLVIVDSSV------EAHVPDYLLYQESATIYPNT-----GPYTAMVCGRSCLAGDI 302
                  V               D   Y +   I          P  + V G +CL  D 
Sbjct: 334 LPNTEGNVTVVEGTSLSLSEQWFDSEYYPDPYLIRAGKILSQGNPTDSAVAGSTCLDSDY 393

Query: 303 FGEF--HFEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPT 341
                  F    + GD + + D AGY ++   + F+G   P 
Sbjct: 394 LSRRFIRFPDRPQPGDILVYPDTAGYQMDSNESSFHGKEPPK 435


>gi|189424734|ref|YP_001951911.1| arginine decarboxylase [Geobacter lovleyi SZ]
 gi|226732567|sp|B3EAF3|SPEA_GEOLS RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|189420993|gb|ACD95391.1| arginine decarboxylase [Geobacter lovleyi SZ]
          Length = 635

 Score = 63.6 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 44/299 (14%), Positives = 83/299 (27%), Gaps = 48/299 (16%)

Query: 12  QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
             L   + +   + +NA          +    +K      + + +  Y      G    S
Sbjct: 67  DVLQGRIASINRVFRNAIAENDYPAKYQTFYPIKVNQQRQVVEAIASYGKRYNIGLEVGS 126

Query: 60  LYEVMLGHEKFGGE-THAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112
             E++ G     G         YKD E          +    TI+   + +L K  + A+
Sbjct: 127 KPELVAGIAISTGNGLPIICNGYKDAEYIETVLFATRVGYNITIVVEKLFELEKIIELAK 186

Query: 113 KLHKKIGLRINPSVSYSKFILA-DPNRPFSRLGEKCKDKIESEIK--------NVNGLMF 163
           K   +  L I   +S              ++ G +  + + +            VN L  
Sbjct: 187 KTGIRPSLGIRVKLSSKGTGKWATSGGEDAKFGLRMSEIMAAIKMLQEADLLDCVNLLHS 246

Query: 164 HNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------------- 207
           H   +                I  E       I+++ +GGG+                  
Sbjct: 247 HIGSQVTKIDKIKTALIEAARIYSEMRKLGVNIQYLDIGGGLGVDYDGSKSSYFSSVNYT 306

Query: 208 ----DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD 262
                  V    + + + +      I  E G A V + + L T VL+ +          
Sbjct: 307 VEEYANDVIYQIKNICDEAGVDCPNIISESGRATVAHYSVLVTNVLNTNTQNLMPDYEQ 365


>gi|189459864|ref|ZP_03008649.1| hypothetical protein BACCOP_00494 [Bacteroides coprocola DSM 17136]
 gi|189433474|gb|EDV02459.1| hypothetical protein BACCOP_00494 [Bacteroides coprocola DSM 17136]
          Length = 630

 Score = 63.6 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/313 (11%), Positives = 91/313 (29%), Gaps = 49/313 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIR----KNAGVK----LLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L N ++          +  G +    ++  +K      + + +  +     
Sbjct: 59  PMLVRFPDILDNRIEKISNCFTLASEEYGYQAQNFIIYPIKVNQMRPVVEEIISHGKKFN 118

Query: 53  DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLN 105
            G  + S  E+          ++      YKD            +     ++   +++L 
Sbjct: 119 LGLEAGSKPELHAVIAINTDSDSLIICNGYKDESYIELALLAQKMGKRIFLVVEKLNELR 178

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK-------- 156
                A++L+ +  + I   ++ S     + +    S+ G    + +E+           
Sbjct: 179 LIAKIAKQLNVRPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDFIEKKEMKD 238

Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213
            +  + FH   +    +              +       +E++ +GGG+           
Sbjct: 239 CLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHQLGFPVEFVDIGGGLGVDYDGTRSSY 298

Query: 214 FCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDISENI 255
               +    ++Y                     I  E G ++  + + L   VL+ +   
Sbjct: 299 SESSVNYSIQEYVNDSISIMVDASNKNNIPHPNIITESGRSLTAHHSVLIFEVLETASLP 358

Query: 256 KNLVIVDSSVEAH 268
           +     + S E H
Sbjct: 359 EMEEEFEVSPEDH 371


>gi|157148490|ref|YP_001455809.1| arginine decarboxylase [Citrobacter koseri ATCC BAA-895]
 gi|157085695|gb|ABV15373.1| hypothetical protein CKO_04316 [Citrobacter koseri ATCC BAA-895]
          Length = 637

 Score = 63.6 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 66  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 125

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 126 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 185

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            D+A++L+    L +   ++         +     + G      ++            ++
Sbjct: 186 LDEAERLNVIPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 245

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 246 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 305

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  I    G+A   +
Sbjct: 306 S-VNYGLNEYANNIIWAIGDACEEH 329


>gi|59801825|ref|YP_208537.1| arginine decarboxylase [Neisseria gonorrhoeae FA 1090]
 gi|194099290|ref|YP_002002384.1| arginine decarboxylase [Neisseria gonorrhoeae NCCP11945]
 gi|239999556|ref|ZP_04719480.1| arginine decarboxylase [Neisseria gonorrhoeae 35/02]
 gi|240014732|ref|ZP_04721645.1| arginine decarboxylase [Neisseria gonorrhoeae DGI18]
 gi|240017180|ref|ZP_04723720.1| arginine decarboxylase [Neisseria gonorrhoeae FA6140]
 gi|240081181|ref|ZP_04725724.1| arginine decarboxylase [Neisseria gonorrhoeae FA19]
 gi|240113394|ref|ZP_04727884.1| arginine decarboxylase [Neisseria gonorrhoeae MS11]
 gi|240116258|ref|ZP_04730320.1| arginine decarboxylase [Neisseria gonorrhoeae PID18]
 gi|240118544|ref|ZP_04732606.1| arginine decarboxylase [Neisseria gonorrhoeae PID1]
 gi|240121255|ref|ZP_04734217.1| arginine decarboxylase [Neisseria gonorrhoeae PID24-1]
 gi|240124090|ref|ZP_04737046.1| arginine decarboxylase [Neisseria gonorrhoeae PID332]
 gi|240126293|ref|ZP_04739179.1| arginine decarboxylase [Neisseria gonorrhoeae SK-92-679]
 gi|240128755|ref|ZP_04741416.1| arginine decarboxylase [Neisseria gonorrhoeae SK-93-1035]
 gi|254494273|ref|ZP_05107444.1| biosynthetic arginine decarboxylase [Neisseria gonorrhoeae 1291]
 gi|260439927|ref|ZP_05793743.1| arginine decarboxylase [Neisseria gonorrhoeae DGI2]
 gi|268595368|ref|ZP_06129535.1| arginine decarboxylase [Neisseria gonorrhoeae 35/02]
 gi|268597293|ref|ZP_06131460.1| arginine decarboxylase [Neisseria gonorrhoeae FA19]
 gi|268599467|ref|ZP_06133634.1| biosynthetic arginine decarboxylase [Neisseria gonorrhoeae MS11]
 gi|268601923|ref|ZP_06136090.1| biosynthetic arginine decarboxylase [Neisseria gonorrhoeae PID18]
 gi|268604254|ref|ZP_06138421.1| biosynthetic arginine decarboxylase [Neisseria gonorrhoeae PID1]
 gi|268682713|ref|ZP_06149575.1| biosynthetic arginine decarboxylase [Neisseria gonorrhoeae PID332]
 gi|268684877|ref|ZP_06151739.1| biosynthetic arginine decarboxylase [Neisseria gonorrhoeae
           SK-92-679]
 gi|268687140|ref|ZP_06154002.1| biosynthetic arginine decarboxylase [Neisseria gonorrhoeae
           SK-93-1035]
 gi|291043205|ref|ZP_06568928.1| arginine decarboxylase [Neisseria gonorrhoeae DGI2]
 gi|293398534|ref|ZP_06642712.1| arginine decarboxylase [Neisseria gonorrhoeae F62]
 gi|59718720|gb|AAW90125.1| putative arginine decarboxylase [Neisseria gonorrhoeae FA 1090]
 gi|193934580|gb|ACF30404.1| arginine decarboxylase [Neisseria gonorrhoeae NCCP11945]
 gi|226513313|gb|EEH62658.1| biosynthetic arginine decarboxylase [Neisseria gonorrhoeae 1291]
 gi|268548757|gb|EEZ44175.1| arginine decarboxylase [Neisseria gonorrhoeae 35/02]
 gi|268551081|gb|EEZ46100.1| arginine decarboxylase [Neisseria gonorrhoeae FA19]
 gi|268583598|gb|EEZ48274.1| biosynthetic arginine decarboxylase [Neisseria gonorrhoeae MS11]
 gi|268586054|gb|EEZ50730.1| biosynthetic arginine decarboxylase [Neisseria gonorrhoeae PID18]
 gi|268588385|gb|EEZ53061.1| biosynthetic arginine decarboxylase [Neisseria gonorrhoeae PID1]
 gi|268622997|gb|EEZ55397.1| biosynthetic arginine decarboxylase [Neisseria gonorrhoeae PID332]
 gi|268625161|gb|EEZ57561.1| biosynthetic arginine decarboxylase [Neisseria gonorrhoeae
           SK-92-679]
 gi|268627424|gb|EEZ59824.1| biosynthetic arginine decarboxylase [Neisseria gonorrhoeae
           SK-93-1035]
 gi|291012811|gb|EFE04794.1| arginine decarboxylase [Neisseria gonorrhoeae DGI2]
 gi|291611005|gb|EFF40102.1| arginine decarboxylase [Neisseria gonorrhoeae F62]
 gi|317164804|gb|ADV08345.1| arginine decarboxylase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 630

 Score = 63.6 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 38/265 (14%), Positives = 70/265 (26%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L       + A        G  L+  +K      + ++L       G
Sbjct: 59  PVLFCFPQILEHRLRDINRAFQTAREECGYKGGYCLVYPIKVNQHRRVIESLMSSGQPHG 118

Query: 55  TTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
             + S  E+M      G  +T      YKD E        + +       + K  +    
Sbjct: 119 LEAGSKAELMAVLAHAGTRQTLIVCNGYKDREYIRFALMGEKLGHQVYLVIEKLSEIQMV 178

Query: 114 LHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNV 158
           L +   L I P         S             S+ G      ++             +
Sbjct: 179 LEEAEKLGIKPRLGVRARLASQGSGKWQSSGGEKSKFGLSASQVLQLVDILKQKNRLDCL 238

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I    +GGG+    +    +  C
Sbjct: 239 QLLHFHLGSQLGNIRDVATGVHESARFYVELHKLGVNIRCFDVGGGLGVDYEGNRTQSDC 298

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  +     +A + +
Sbjct: 299 S-VNYSLNEYAATVVWGISQACLEH 322


>gi|267995251|gb|ACY90136.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 14028S]
 gi|323131443|gb|ADX18873.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
 gi|332989953|gb|AEF08936.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. UK-1]
          Length = 658

 Score = 63.6 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 207 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRDAGRLDSL 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  I    G+A   +
Sbjct: 327 S-VNYGLNEYANNIIWAIGDACEEH 350


>gi|253699938|ref|YP_003021127.1| arginine decarboxylase [Geobacter sp. M21]
 gi|259511346|sp|C6E3V4|SPEA_GEOSM RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|251774788|gb|ACT17369.1| arginine decarboxylase [Geobacter sp. M21]
          Length = 635

 Score = 63.6 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/297 (12%), Positives = 88/297 (29%), Gaps = 38/297 (12%)

Query: 12  QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
             L   + +   + KNA          +    +K      + + +  +      G    S
Sbjct: 67  NILEGRIASISRVFKNAISDNNYPAKYQTFYPIKVNQQRQVVEAIANFGKKYNIGLEVGS 126

Query: 60  LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112
             E++       G         YKD E          +    TI+   + +L K  + ++
Sbjct: 127 KPELVAAISMSTGNNLPILCNGYKDTEFIETVLFATRVGYDITIVVEKLFELEKIVEVSK 186

Query: 113 KLHKKIGLRINPSVSYSKFILADPN-RPFSRLGEKCKDKIESEIK--------NVNGLMF 163
           +      L I   +S         +    ++ G +  + I +           +V  L F
Sbjct: 187 RTGIVPKLGIRVKLSSKGIGKWSTSGGDDAKFGLRISELIAAIEMLKQNDMLDSVKLLHF 246

Query: 164 HNNCENKSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
           H   +          L    + +         +E++ +GGG+           +   +  
Sbjct: 247 HVGSQITKIDKIKNALIEGTRIYAEMRKLGVNLEFLDIGGGLGVDYDG-SKSSYFSSVNY 305

Query: 221 FSEKYSVQIYLEPGEAI------VTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPD 271
             E+Y+  +  +             N  + +        ++    +++++ +  +PD
Sbjct: 306 SLEEYANDVIYQVKNICDDAGVPCPNIISESGRATVAHYSVLVTDVLNNNTQTLMPD 362


>gi|307132688|ref|YP_003884704.1| biosynthetic arginine decarboxylase, PLP-binding protein [Dickeya
           dadantii 3937]
 gi|306530217|gb|ADN00148.1| biosynthetic arginine decarboxylase, PLP-binding protein [Dickeya
           dadantii 3937]
          Length = 658

 Score = 63.6 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 38/265 (14%), Positives = 79/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A        G  L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINAAFKRARESFGYEGGYFLVYPIKVNQHRRVIESLINSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  LGH          N       I        L +   ++   +S++N  
Sbjct: 147 LEAGSKAELMAVLGHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEINMV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 207 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVELLRKANRLDSL 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 267 QLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  +    G+A    
Sbjct: 327 S-VNYGLNEYANNVIWGIGDACNEY 350


>gi|254670605|emb|CBA06562.1| biosynthetic arginine decarboxylase [Neisseria meningitidis
           alpha153]
 gi|261391981|emb|CAX49445.1| biosynthetic arginine decarboxylase (ADC) [Neisseria meningitidis
           8013]
          Length = 630

 Score = 63.6 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 38/265 (14%), Positives = 70/265 (26%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L       + A        G  L+  +K      + ++L       G
Sbjct: 59  PVLFCFPQILEHRLRDINRAFQTAREECGYKGGYCLVYPIKVNQHRRVIESLMSSGQPHG 118

Query: 55  TTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
             + S  E+M      G  +T      YKD E        + +       + K  +    
Sbjct: 119 LEAGSKAELMAVLAHAGTRQTLIVCNGYKDREYIRFALMGEKLGHQVYLVIEKLSEIQMV 178

Query: 114 LHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNV 158
           L +   L I P         S             S+ G      ++             +
Sbjct: 179 LEEAEKLGIKPRLGVRARLASQGSGKWQSSGGEKSKFGLSASQVLQLVDILKQKNRLDCL 238

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I    +GGG+    +    +  C
Sbjct: 239 QLLHFHLGSQLGNIRDVATGVHESARFYVELHKLGVNIRCFDVGGGLGVDYEGNRTQSDC 298

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  +     +A + +
Sbjct: 299 S-VNYSLNEYAATVVWGISQACLEH 322


>gi|119510057|ref|ZP_01629197.1| arginine decarboxylase [Nodularia spumigena CCY9414]
 gi|119465244|gb|EAW46141.1| arginine decarboxylase [Nodularia spumigena CCY9414]
          Length = 671

 Score = 63.6 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 83/288 (28%), Gaps = 48/288 (16%)

Query: 12  QKLLNNLDTALYIRKNAGVK-----LL---LALKCFAAWGMFDTLNQYM----DGTTSSS 59
             L + ++        A  +     +      +KC     + + L ++      G  + S
Sbjct: 108 DILEDRIERLNACFNKAIARYNYPGVYRGVFPVKCNQERHLIEDLVKFGKPHQFGLEAGS 167

Query: 60  LYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK------AQ 112
             E+M+                YKD E          +   ++  + + ++        +
Sbjct: 168 KPELMIALALLDTPGALLICNGYKDREYVETAMLAQRLGQTSIIVIEQIEEVDLVIAAHR 227

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNVNGLMF 163
           +L  K  L +   +S         +     + G    + + +            +  + F
Sbjct: 228 QLGIKPILGVRAKLSTQGMGRWGTSTGDRAKFGLTIPEIMGAVNKLREANLLDCLQLMHF 287

Query: 164 HNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----------KDYP 210
           H   +                I  E       ++++ +GGG+              K+Y 
Sbjct: 288 HIGSQISAINVIKDAIQEASRIYVELAMLGADMKYLDVGGGLGVDYDGSQTNFYASKNYN 347

Query: 211 VKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDI 251
           ++++   +    +            +  E G AI ++ + L   VL  
Sbjct: 348 MQNYANDIVAELKDTCAERQIPVPTLISESGRAIASHQSVLIFDVLST 395


>gi|327412922|emb|CAX67936.1| biosynthetic arginine decarboxylase [Salmonella bongori]
          Length = 658

 Score = 63.6 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 207 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRDAGRLDSL 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  I    G+A   +
Sbjct: 327 S-VNYGLNEYANNIIWAIGDACEEH 350


>gi|312887815|ref|ZP_07747402.1| Orn/DAP/Arg decarboxylase 2 [Mucilaginibacter paludis DSM 18603]
 gi|311299634|gb|EFQ76716.1| Orn/DAP/Arg decarboxylase 2 [Mucilaginibacter paludis DSM 18603]
          Length = 464

 Score = 63.6 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 47/393 (11%), Positives = 107/393 (27%), Gaps = 59/393 (15%)

Query: 12  QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV--MLGHEK 69
             + NN             K     K      + +   +      +SS +++  +   EK
Sbjct: 66  AIIKNNYR--------GTYKYCYCTKSSHFKHIVEEALKNEIHLETSSAFDMPMIDALEK 117

Query: 70  ---FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQ------LNKFKDKAQKLHKKIGL 120
                 E       +K  +    + +     F+ +             D   ++     L
Sbjct: 118 KGLLNKEMTVICNGFKTFQYKQYIIDMLHDGFSNIIPVLDNKEEFNIYDDEVEMSTPCNL 177

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCK----DKIESEIKNVNGLMFHNNCENKSFLCFS 176
            I  +           +R   R+ +          ++    V  L F  N        + 
Sbjct: 178 GIRIAAEEQPDSQFYTSRLGVRIEDVIDFYYNKIEKNPNFRVKLLHFFINSGISDTPYYW 237

Query: 177 AMLKNI---EKEFGHFITQIEWISLGGGIH----------FTDKDYPVKDFCQRLKEFSE 223
             L+       +F      ++ + +GGG+           +      +    + +    +
Sbjct: 238 NELEKYVTLYCKFKKINPDLDTLDIGGGMPFKDSLVFDFDYEYMVNEIVSRIKEICAEHD 297

Query: 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLL----YQE 277
                I  E G+  V   + +   VL   +       +++D S   ++PD       Y  
Sbjct: 298 VMEPDIITEFGKYTVAEASGILYKVLGRKQQNDRERWLMLDGSFITNLPDVWALNQKYVL 357

Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEF-----HFEKPVKIGDRISFEDVAGYNINRKN 332
                 ++      + G +C   D + +       F    +    + F     Y     +
Sbjct: 358 LPINNWDSEYERVNLGGITCDGQDYYNQEAHMNSVFMPKTRKVQYVGFFHTGAYQEVL-S 416

Query: 333 WFNGI-----NMPTIAVKNVDGTIKAIREFSYN 360
            + GI       P   +   +      R+ ++N
Sbjct: 417 GYGGIHHCLLPSPKHVIIRRN------RDETFN 443


>gi|207858348|ref|YP_002244999.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|206710151|emb|CAR34507.1| Biosynthetic arginine decarboxylase [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
          Length = 637

 Score = 63.6 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 66  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 125

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 126 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 185

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 186 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRDAGRLDSL 245

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 246 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 305

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  I    G+A   +
Sbjct: 306 S-VNYGLNEYANNIIWAIGDACEEH 329


>gi|197363954|ref|YP_002143591.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|197095431|emb|CAR60990.1| biosynthetic arginine decarboxylase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
          Length = 637

 Score = 63.6 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 66  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 125

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 126 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 185

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 186 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRDAGRLDSL 245

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 246 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 305

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  I    G+A   +
Sbjct: 306 S-VNYGLNEYANNIIWAIGDACEEH 329


>gi|161506362|ref|YP_001573474.1| arginine decarboxylase [Salmonella enterica subsp. arizonae serovar
           62:z4,z23:-- str. RSK2980]
 gi|160867709|gb|ABX24332.1| hypothetical protein SARI_04559 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 637

 Score = 63.6 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 66  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 125

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 126 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 185

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 186 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRDAGRLDSL 245

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 246 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 305

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  I    G+A   +
Sbjct: 306 S-VNYGLNEYANNIIWAIGDACEEH 329


>gi|62181596|ref|YP_218013.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161616049|ref|YP_001590014.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Paratyphi B str. SPB7]
 gi|167553208|ref|ZP_02346958.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|168234364|ref|ZP_02659422.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|168236154|ref|ZP_02661212.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|168242888|ref|ZP_02667820.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|168463728|ref|ZP_02697645.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|168819885|ref|ZP_02831885.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|194442484|ref|YP_002042345.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194450533|ref|YP_002047074.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194471977|ref|ZP_03077961.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|194735932|ref|YP_002116034.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197250362|ref|YP_002148000.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|197265854|ref|ZP_03165928.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|200388377|ref|ZP_03214989.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|204928011|ref|ZP_03219211.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|213424118|ref|ZP_03357011.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Typhi str. E02-1180]
 gi|213614407|ref|ZP_03371233.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-2068]
 gi|213648499|ref|ZP_03378552.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Typhi str. J185]
 gi|213863213|ref|ZP_03386468.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Typhi str. M223]
 gi|238909886|ref|ZP_04653723.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Tennessee str. CDC07-0191]
 gi|289828641|ref|ZP_06546451.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-3139]
 gi|75480949|sp|Q57K30|SPEA_SALCH RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|189046765|sp|A9N4N1|SPEA_SALPB RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|226732570|sp|B5F5L1|SPEA_SALA4 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|226732572|sp|B4THH1|SPEA_SALHS RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|226734330|sp|B4T5J3|SPEA_SALNS RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|226734332|sp|B4TV55|SPEA_SALSV RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|62129229|gb|AAX66932.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161365413|gb|ABX69181.1| hypothetical protein SPAB_03850 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194401147|gb|ACF61369.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194408837|gb|ACF69056.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194458341|gb|EDX47180.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|194711434|gb|ACF90655.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|195633388|gb|EDX51802.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|197214065|gb|ACH51462.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|197244109|gb|EDY26729.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197290926|gb|EDY30280.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|199605475|gb|EDZ04020.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|204322333|gb|EDZ07530.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|205322284|gb|EDZ10123.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|205331694|gb|EDZ18458.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|205338186|gb|EDZ24950.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|205343399|gb|EDZ30163.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|312914109|dbj|BAJ38083.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. T000240]
 gi|322613484|gb|EFY10425.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315996572]
 gi|322621076|gb|EFY17934.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-1]
 gi|322624140|gb|EFY20974.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-3]
 gi|322628121|gb|EFY24910.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-4]
 gi|322633240|gb|EFY29982.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-1]
 gi|322636182|gb|EFY32890.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-2]
 gi|322639520|gb|EFY36208.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 531954]
 gi|322647547|gb|EFY44036.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Montevideo str. NC_MB110209-0054]
 gi|322648731|gb|EFY45178.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Montevideo str. OH_2009072675]
 gi|322653786|gb|EFY50112.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Montevideo str. CASC_09SCPH15965]
 gi|322657892|gb|EFY54160.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 19N]
 gi|322663995|gb|EFY60194.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 81038-01]
 gi|322668994|gb|EFY65145.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MD_MDA09249507]
 gi|322673012|gb|EFY69119.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 414877]
 gi|322677997|gb|EFY74060.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 366867]
 gi|322681173|gb|EFY77206.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 413180]
 gi|322687897|gb|EFY83864.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 446600]
 gi|322716079|gb|EFZ07650.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
 gi|323194907|gb|EFZ80094.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609458-1]
 gi|323196658|gb|EFZ81806.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556150-1]
 gi|323202642|gb|EFZ87682.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609460]
 gi|323207871|gb|EFZ92817.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 507440-20]
 gi|323212577|gb|EFZ97394.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556152]
 gi|323214940|gb|EFZ99688.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB101509-0077]
 gi|323222670|gb|EGA07035.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB102109-0047]
 gi|323225413|gb|EGA09645.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB110209-0055]
 gi|323230572|gb|EGA14690.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB111609-0052]
 gi|323235077|gb|EGA19163.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009083312]
 gi|323239116|gb|EGA23166.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009085258]
 gi|323244526|gb|EGA28532.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315731156]
 gi|323247141|gb|EGA31107.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2009159199]
 gi|323253376|gb|EGA37205.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008282]
 gi|323256317|gb|EGA40053.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008283]
 gi|323262507|gb|EGA46063.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008284]
 gi|323267397|gb|EGA50881.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008285]
 gi|323269199|gb|EGA52654.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008287]
          Length = 632

 Score = 63.6 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 61  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 120

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 121 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 180

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 181 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRDAGRLDSL 240

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 241 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 300

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  I    G+A   +
Sbjct: 301 S-VNYGLNEYANNIIWAIGDACEEH 324


>gi|85059996|ref|YP_455698.1| arginine decarboxylase [Sodalis glossinidius str. 'morsitans']
 gi|84780516|dbj|BAE75293.1| biosynthetic arginine decarboxylase [Sodalis glossinidius str.
           'morsitans']
          Length = 640

 Score = 63.6 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 43/308 (13%), Positives = 84/308 (27%), Gaps = 48/308 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     + A        G  L+  +K      + ++L       G
Sbjct: 69  PALFCFPQILQHRLRSINAAFQRARDSFGYQGGYFLVYPIKVNQHRRVIESLVNSGEPLG 128

Query: 55  TTSSSLYEVML--GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112
             + S  E+M    H          N  YKD E   +    + I       + K  +   
Sbjct: 129 LEAGSKAELMAVIAHAGMTRTVIVCN-GYKDREYIRLALIGEKIGHKVYLVIEKLSEITL 187

Query: 113 KLHKKIGLRINPSVSYSK-------FILADPNRPFSRLGEKCKDKIESEI--------KN 157
            L +   L + P +                     S+ G      ++            +
Sbjct: 188 VLEEAERLNVVPRLGVRTRLASQGSGKWQSSGGEKSKFGLAAAQVLQLVDLLRAKGRLDS 247

Query: 158 VNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------- 207
           +  L FH   +    +              E      +IE   +GGG+    +       
Sbjct: 248 LQLLHFHLGSQLSNIRDIASGVRESARFYVELHKLGVRIECFDVGGGLGVDYEGTRSQSD 307

Query: 208 ---DYPVKDFCQRLKEFSEKYSVQI-------YLEPGEAIVTNTTTLNTTVLDISENIKN 257
              +Y + ++   +         +          E G A+  + T L + V+ +  N  +
Sbjct: 308 GSANYGLNEYANNVIWGIGDACNEYGLPHPTVITESGRAVTAHHTVLVSNVIGVERNEFS 367

Query: 258 LVIVDSSV 265
                 + 
Sbjct: 368 EPHPPEAD 375


>gi|330996866|ref|ZP_08320735.1| arginine 2-monooxygenase [Paraprevotella xylaniphila YIT 11841]
 gi|329572309|gb|EGG53968.1| arginine 2-monooxygenase [Paraprevotella xylaniphila YIT 11841]
          Length = 630

 Score = 63.6 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/268 (12%), Positives = 79/268 (29%), Gaps = 31/268 (11%)

Query: 5   PYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L N ++          K    K    ++  +K      + + +  +     
Sbjct: 59  PVLVRFPDILDNRIEKTSNCFEKAAKEYDYKGENFIIYPIKVNQIRPVVEEVISHGKKFN 118

Query: 53  DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLN 105
            G  + S  E+           +      YKD            +     ++   +++LN
Sbjct: 119 LGLEAGSKPELHAVIAVNTDSASPIICNGYKDHNYIELALLAQKMGKRIFLVVEKLNELN 178

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK-------- 156
              + AQKL+ +  + I   ++ S     + +    S+ G    + +E+           
Sbjct: 179 TIYEVAQKLNVRPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDMLEAKGMKD 238

Query: 157 NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213
            +  + FH   +          L+       +  H    +E++  GGG+          +
Sbjct: 239 CLKLIHFHIGSQITKIRRIQTALREASQFYIQLHHLGYDVEFVDCGGGLGVDYDGTRSSN 298

Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
               +    ++Y         +A   N 
Sbjct: 299 SESSVNYSIQEYVNDCIYTFVDAANKNN 326


>gi|282881177|ref|ZP_06289864.1| arginine 2-monooxygenase [Prevotella timonensis CRIS 5C-B1]
 gi|281304981|gb|EFA97054.1| arginine 2-monooxygenase [Prevotella timonensis CRIS 5C-B1]
          Length = 630

 Score = 63.6 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 25/256 (9%), Positives = 70/256 (27%), Gaps = 28/256 (10%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
           ++D  ++           K         ++  +K      + + +  +      G  + S
Sbjct: 67  ILD-NRIEKTASCFEQASKEYNYTGQNFIIYPIKVNQMQPVVEEIISHGQKFNLGLEAGS 125

Query: 60  LYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQ 112
             E+          ++      YKD            +     I+   +++L+     A+
Sbjct: 126 KPELHAVIAVQCQSDSLIICNGYKDQNYIELALLAQKMGKRIFIVIEKLNELDIIAKAAK 185

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK--------NVNGLMF 163
           K+  +  + I   ++ S       +    S+ G    + + +            ++ + F
Sbjct: 186 KIGVRPNIGIRIKLASSGSGKWAESGGDASKFGLNSSELLLALKMLEEKGLKDCLHLIHF 245

Query: 164 HNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
           H   +                           ++++  GGG+          +    +  
Sbjct: 246 HIGSQITKIRRIQTALREAAQYYINLHKMGYPVDFVDCGGGLGVDYDGTRSSNSESSVNY 305

Query: 221 FSEKYSVQIYLEPGEA 236
             ++Y         EA
Sbjct: 306 SIQEYVNDCIYTFVEA 321


>gi|213420077|ref|ZP_03353143.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Typhi str. E01-6750]
          Length = 404

 Score = 63.6 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/265 (12%), Positives = 76/265 (28%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 61  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 120

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 121 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 180

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 181 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRDAGRLDSL 240

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 241 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 300

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  I     +A   +
Sbjct: 301 S-VNYGLNEYANNIIWAISDACEEH 324


>gi|307640137|gb|ADN83826.1| diaminopimelate decarboxylase-like protein [Brachionus plicatilis]
 gi|307640139|gb|ADN83827.1| diaminopimelate decarboxylase-like protein [Brachionus plicatilis]
          Length = 142

 Score = 63.6 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 27/54 (50%)

Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPT 341
           + + + G +C   D+  +  +   ++  + + F+D+  Y I+    FNGI +P 
Sbjct: 28  FKSSIWGPTCDGLDLVCKEIYVPELETNEFMVFKDMGAYTISGAVAFNGIPLPK 81


>gi|288933590|ref|YP_003437649.1| arginine decarboxylase [Klebsiella variicola At-22]
 gi|290511343|ref|ZP_06550712.1| arginine decarboxylase [Klebsiella sp. 1_1_55]
 gi|288888319|gb|ADC56637.1| arginine decarboxylase [Klebsiella variicola At-22]
 gi|289776336|gb|EFD84335.1| arginine decarboxylase [Klebsiella sp. 1_1_55]
          Length = 658

 Score = 63.6 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 78/262 (29%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALVGEKMGHKVYLVIEKMSEIAIV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIKNV 158
            ++A++L+    L +   ++         +     + G      ++          ++++
Sbjct: 207 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVEILRAAGHLESL 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  I    G+A 
Sbjct: 327 S-VNYGLNEYANNIIWAIGDAC 347


>gi|205354010|ref|YP_002227811.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|205273791|emb|CAR38786.1| Biosynthetic arginine decarboxylase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
          Length = 637

 Score = 63.6 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 66  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 125

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 126 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 185

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 186 LEEAERLNVGPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRDAGRLDSL 245

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 246 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 305

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  I    G+A   +
Sbjct: 306 S-VNYGLNEYANNIIWAIGDACEEH 329


>gi|168264469|ref|ZP_02686442.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|205347081|gb|EDZ33712.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
          Length = 632

 Score = 63.6 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 61  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 120

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 121 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 180

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 181 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRDAGRLDSL 240

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 241 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 300

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  I    G+A   +
Sbjct: 301 S-VNYGLNEYANNIIWAIGDACEEH 324


>gi|152971892|ref|YP_001337001.1| arginine decarboxylase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|150956741|gb|ABR78771.1| arginine decarboxylase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
          Length = 658

 Score = 63.6 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 78/262 (29%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALVGEKMGHKVYLVIEKMSEIAIV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIKNV 158
            ++A++L+    L +   ++         +     + G      ++          ++++
Sbjct: 207 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVEILREAGHLESL 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  I    G+A 
Sbjct: 327 S-VNYGLNEYANNIIWAIGDAC 347


>gi|327395094|dbj|BAK12516.1| biosynthetic arginine decarboxylase SpeA [Pantoea ananatis AJ13355]
          Length = 659

 Score = 63.6 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 36/274 (13%), Positives = 78/274 (28%), Gaps = 31/274 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINAAFKRARESYGYTGDYFLVYPIKVNQHKRVIESLVNSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   ++++   
Sbjct: 147 LEAGSKAELMAVLAHAGQTRSVIVCNGYKDREYIRLALIGEKIGHKVYLVLEKMTEVRMV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIKN--------V 158
            ++A++L+    L I   ++         +     + G      ++             +
Sbjct: 207 LEEAERLNVVPRLGIRARLASQGSGKWQSSGGEKSKFGLSATQVLKLVEIMREAGRIDSL 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 267 QLLHFHLGSQMSNIRDIATGVRESARFYVELAKLGVNIKCFDVGGGLGVDYEGTRSQSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVL 249
             +     +Y+  +    G A        + TV+
Sbjct: 327 S-VNYGLNEYANNVIWGIG-AACDEHGLEHPTVI 358


>gi|167990388|ref|ZP_02571488.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|205331225|gb|EDZ17989.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
          Length = 632

 Score = 63.6 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 61  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 120

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 121 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 180

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 181 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRDAGRLDSL 240

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 241 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 300

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  I    G+A   +
Sbjct: 301 S-VNYGLNEYANNIIWAIGDACEEH 324


>gi|198244380|ref|YP_002217062.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|226732571|sp|B5FUJ7|SPEA_SALDC RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|197938896|gb|ACH76229.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
          Length = 632

 Score = 63.6 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 61  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 120

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 121 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 180

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 181 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRDAGRLDSL 240

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 241 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 300

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  I    G+A   +
Sbjct: 301 S-VNYGLNEYANNIIWAIGDACEEH 324


>gi|261248218|emb|CBG26055.1| ADC [Salmonella enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|301159642|emb|CBW19161.1| Biosynthetic arginine decarboxylase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
          Length = 637

 Score = 63.6 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 66  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 125

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 126 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 185

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 186 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRDAGRLDSL 245

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 246 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 305

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  I    G+A   +
Sbjct: 306 S-VNYGLNEYANNIIWAIGDACEEH 329


>gi|262042589|ref|ZP_06015745.1| arginine 2-monooxygenase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|329998564|ref|ZP_08303161.1| arginine 2-monooxygenase [Klebsiella sp. MS 92-3]
 gi|259040023|gb|EEW41138.1| arginine 2-monooxygenase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|328538635|gb|EGF64734.1| arginine 2-monooxygenase [Klebsiella sp. MS 92-3]
          Length = 637

 Score = 63.6 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 78/262 (29%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 66  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 125

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 126 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALVGEKMGHKVYLVIEKMSEIAIV 185

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIKNV 158
            ++A++L+    L +   ++         +     + G      ++          ++++
Sbjct: 186 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVEILREAGHLESL 245

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 246 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 305

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  I    G+A 
Sbjct: 306 S-VNYGLNEYANNIIWAIGDAC 326


>gi|271502137|ref|YP_003335163.1| arginine decarboxylase [Dickeya dadantii Ech586]
 gi|270345692|gb|ACZ78457.1| arginine decarboxylase [Dickeya dadantii Ech586]
          Length = 658

 Score = 63.6 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 78/263 (29%), Gaps = 30/263 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A        G  L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINAAFKRARESFGYEGGYFLVYPIKVNQHRRVIESLINSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  LGH          N       I        L +   ++   +S++   
Sbjct: 147 LEAGSKAELMAVLGHAGMTRTVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIKLV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 207 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVELLRNANRLDSL 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 267 QLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAIV 238
             +     +Y+  +    G+A  
Sbjct: 327 S-VNYGLNEYANNVIWGIGDACN 348


>gi|206579063|ref|YP_002236610.1| arginine decarboxylase [Klebsiella pneumoniae 342]
 gi|226732568|sp|B5XUB1|SPEA_KLEP3 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|206568121|gb|ACI09897.1| arginine decarboxylase [Klebsiella pneumoniae 342]
          Length = 632

 Score = 63.6 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 78/262 (29%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 61  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 120

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 121 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALVGEKMGHKVYLVIEKMSEIAIV 180

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIKNV 158
            ++A++L+    L +   ++         +     + G      ++          ++++
Sbjct: 181 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVEILRAAGHLESL 240

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 241 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 300

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  I    G+A 
Sbjct: 301 S-VNYGLNEYANNIIWAIGDAC 321


>gi|332880970|ref|ZP_08448640.1| arginine 2-monooxygenase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332681144|gb|EGJ54071.1| arginine 2-monooxygenase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 630

 Score = 63.6 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/268 (12%), Positives = 79/268 (29%), Gaps = 31/268 (11%)

Query: 5   PYYLIDKQKLLNNLDT----ALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L N ++          K    K    ++  +K      + + +  +     
Sbjct: 59  PVLVRFPDILDNRIEKTSNCFEKAAKEYDYKGENFIIYPIKVNQIRPVVEEVISHGKKFN 118

Query: 53  DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLN 105
            G  + S  E+           +      YKD            +     ++   +++LN
Sbjct: 119 LGLEAGSKPELHAVIAVNTDSASPIICNGYKDHNYIELALLAQKMGKRIFLVVEKLNELN 178

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIK-------- 156
              + AQKL+ +  + I   ++ S     + +    S+ G    + +E+           
Sbjct: 179 TIYEVAQKLNVRPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDMLEAKGMKD 238

Query: 157 NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213
            +  + FH   +          L+       +  H    +E++  GGG+          +
Sbjct: 239 CLKLIHFHIGSQITKIRRIQTALREASQFYIQLHHLGYDVEFVDCGGGLGVDYDGTRSSN 298

Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
               +    ++Y         +A   N 
Sbjct: 299 SESSVNYSIQEYVNDCIYTFVDAANKNN 326


>gi|251788148|ref|YP_003002869.1| arginine decarboxylase [Dickeya zeae Ech1591]
 gi|247536769|gb|ACT05390.1| arginine decarboxylase [Dickeya zeae Ech1591]
          Length = 658

 Score = 63.6 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 78/263 (29%), Gaps = 30/263 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A        G  L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINAAFKRARESFGYEGGYFLVYPIKVNQHRRVIESLINSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  LGH          N       I        L +   ++   +S++   
Sbjct: 147 LEAGSKAELMAVLGHAGMTRTVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIKLV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 207 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVELLRNANRLDSL 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 267 QLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAIV 238
             +     +Y+  +    G+A  
Sbjct: 327 S-VNYGLNEYANNVIWGIGDACN 348


>gi|121999190|ref|YP_001003977.1| arginine decarboxylase [Halorhodospira halophila SL1]
 gi|121590595|gb|ABM63175.1| arginine decarboxylase [Halorhodospira halophila SL1]
          Length = 626

 Score = 63.2 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/293 (11%), Positives = 76/293 (25%), Gaps = 45/293 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P  +     L + +D        A          + +  +K      + + +       G
Sbjct: 61  PVLIRFPAILRDRVDALCDAFGAAMAEADYRGAYQPVYPIKVNQQRSVIEEIVGDGRRVG 120

Query: 55  TTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVL------SNCDTIIFNTVSQLNKFK 108
             + S  E+M                YKD E   +            ++    S+     
Sbjct: 121 LEAGSKPELMAVLALAPTGGTVICNGYKDPEYVRLALRGLQLGLQVHLVLEKRSEARMII 180

Query: 109 DKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ESEIKNVN 159
            +A++L     L +   ++               + G    D +           ++ + 
Sbjct: 181 REARRLGVAPRLGLRVRLASMGAGKWQNTGGERSKFGLTAADALAVVEELREADLLERLE 240

Query: 160 GLMFHNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDK--------- 207
            L FH   +  +        +       E       +  + +GGG+    +         
Sbjct: 241 LLHFHLGSQIANVHDIRAGLSEGARFYTELRRLGAPVSKVDVGGGLGVDYEGTRSRAFCS 300

Query: 208 -----DYPVKDFCQRLKEFSEK---YSVQIYLEPGEAIVTNTTTLNTTVLDIS 252
                     +    LK   ++       +  E G A+  +   L T V+D  
Sbjct: 301 MNYSIAEYAHNVVAALKAVCDEAGLPHPTLITESGRAMTAHHAVLVTPVIDTD 353


>gi|332709030|ref|ZP_08429000.1| arginine decarboxylase [Lyngbya majuscula 3L]
 gi|332352219|gb|EGJ31789.1| arginine decarboxylase [Lyngbya majuscula 3L]
          Length = 715

 Score = 63.2 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 39/314 (12%), Positives = 98/314 (31%), Gaps = 49/314 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L + +         A          + +  +KC     + + +  +     
Sbjct: 125 PLLIHFSDILADQIAQLNACFAQAITRYKYPGRYQGVFPVKCNQHRHVVEDVVYFGQPYQ 184

Query: 53  DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLN------ 105
            G    S  E+M+        ++      YKD E          +  N +  L       
Sbjct: 185 FGLEVGSKPELMIALATLLTPDSLIICNGYKDREYLETALLARRLGHNPIIVLEQLEEVQ 244

Query: 106 -KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK------- 156
              +  A+       L +   +S         +     + G K  + +++  +       
Sbjct: 245 LIIEVAAELGGITPVLGVRAKLSTQSMGRWGNSVGDRAKFGLKIPEILQTIDQLREAGML 304

Query: 157 -NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTD------ 206
            ++  L FH   +  +       ++   + +         ++++ +GGG+          
Sbjct: 305 ESLQLLHFHIGSQISAISAIKDAIREASQIYAELKGLGVNMQYLDVGGGLAVDYDGSKTN 364

Query: 207 ----KDYPVKDFC----QRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISENI 255
               K+Y ++++       +KE  E++ +    +  E G AI ++ + L   VL  S+  
Sbjct: 365 FHASKNYNMQNYANDIVAAVKEACEEHQIPAPTLISESGRAIASHQSVLIFDVLSTSDVE 424

Query: 256 KNLVIVDSSVEAHV 269
                + +  +  +
Sbjct: 425 SQSPPLATEQDHLI 438


>gi|238896471|ref|YP_002921209.1| arginine decarboxylase [Klebsiella pneumoniae NTUH-K2044]
 gi|238548791|dbj|BAH65142.1| arginine decarboxylase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 662

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 78/262 (29%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 91  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 150

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 151 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALVGEKMGHKVYLVIEKMSEIAIV 210

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIKNV 158
            ++A++L+    L +   ++         +     + G      ++          ++++
Sbjct: 211 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVEILREAGHLESL 270

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 271 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 330

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  I    G+A 
Sbjct: 331 S-VNYGLNEYANNIIWAIGDAC 351


>gi|37527545|ref|NP_930889.1| arginine decarboxylase [Photorhabdus luminescens subsp. laumondii
           TTO1]
 gi|48474343|sp|Q7N121|SPEA_PHOLL RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|36786980|emb|CAE16054.1| biosynthetic arginine decarboxylase (ADC) [Photorhabdus luminescens
           subsp. laumondii TTO1]
          Length = 634

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 41/263 (15%), Positives = 75/263 (28%), Gaps = 32/263 (12%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 63  PALFCFPQILQHRLRSINAAFKRARESYGYKGDYFLVYPIKVNQQRRVIESLASSGEPLG 122

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112
             + S  E+M  L H          N  YKD E   +    + +       + K  + AQ
Sbjct: 123 LEAGSKAELMAVLAHAGMTRTVIVCN-GYKDREYIRLALIGEKLGHKVYLVIEKMSEIAQ 181

Query: 113 KLHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIE--------SEIKN 157
            L +   L + P         S             S+ G      ++          + +
Sbjct: 182 VLEEAERLNVIPRLGVRARLASQGSGKWQASGGEKSKFGLAATQVLQLVETLRAVDRLDS 241

Query: 158 VNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDF 214
           +  L FH   +    +              E       I+   +GGG+    +    +  
Sbjct: 242 LQLLHFHLGSQLANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSD 301

Query: 215 CQRLKEFSEKYSVQIYLEPGEAI 237
           C  +     +Y+  +    G+A 
Sbjct: 302 CS-VNYGLNEYANNVIWGIGDAC 323


>gi|291618762|ref|YP_003521504.1| SpeA [Pantoea ananatis LMG 20103]
 gi|291153792|gb|ADD78376.1| SpeA [Pantoea ananatis LMG 20103]
          Length = 663

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 36/274 (13%), Positives = 78/274 (28%), Gaps = 31/274 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 91  PALFCFPQILQHRLRSINAAFKRARESYGYTGDYFLVYPIKVNQHKRVIESLVNSGEPLG 150

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   ++++   
Sbjct: 151 LEAGSKAELMAVLAHAGQTRSVIVCNGYKDREYIRLALIGEKIGHKVYLVLEKMTEVRMV 210

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIKN--------V 158
            ++A++L+    L I   ++         +     + G      ++             +
Sbjct: 211 LEEAERLNVVPRLGIRARLASQGSGKWQSSGGEKSKFGLSATQVLKLVEIMREAGRIDSL 270

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 271 QLLHFHLGSQMSNIRDIATGVRESARFYVELAKLGVNIKCFDVGGGLGVDYEGTRSQSDC 330

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVL 249
             +     +Y+  +    G A        + TV+
Sbjct: 331 S-VNYGLNEYANNVIWGIG-AACDEHGLEHPTVI 362


>gi|254521053|ref|ZP_05133108.1| arginine decarboxylase [Stenotrophomonas sp. SKA14]
 gi|219718644|gb|EED37169.1| arginine decarboxylase [Stenotrophomonas sp. SKA14]
          Length = 629

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 48/332 (14%), Positives = 98/332 (29%), Gaps = 46/332 (13%)

Query: 29  GVKLLLALKCFAAWGMFDTLNQY---MDGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCE 85
           G   +  +K     G+  TL  +     G  + S  E+M                YKD E
Sbjct: 92  GYTAVYPIKVNQHRGVAGTLASHHGEGFGLEAGSKPELMAVLALSRPGGLIVCNGYKDRE 151

Query: 86  IDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRP 139
              +            I+    S+L    ++++ L  K GL +   ++         +  
Sbjct: 152 YIRLALIGRKLGLQTFIVIEKPSELKLVLEESKALDVKPGLGVRMRLASLGAGKWQNSGG 211

Query: 140 FS-RLGEKCKDKIE--------SEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---G 187
              + G   +  ++             ++ L FH   +  +    +  ++   + F    
Sbjct: 212 DKAKFGLSPRQLLDLWKSLRDTEYADCLSLLHFHMGSQISNVRDIANGMREATRYFVELS 271

Query: 188 HFITQIEWISLGGGIHFTDKDYPVKDFCQR--------------LKEFSEKY---SVQIY 230
               +I  + +GGG+    +    + FC                L    E++     +I 
Sbjct: 272 QLGAKITHVDVGGGLGVDYEGTRSRSFCSINYGLNSYASNIVQPLANACEEHGLTPPRIV 331

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE----AHVPDYL-LYQESATIYPNT 285
            E G A+  +   L   V ++ +  +  V      E     H+ +          +    
Sbjct: 332 TECGRAMTAHHAVLIANVSEVEQAQEGRVPDQHDDEPAAIRHLREIHEELDTRPAVELFQ 391

Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDR 317
                   G   LA    G+    +  +I D 
Sbjct: 392 EAQHFHAEG---LASYALGQIDLPQRARIDDL 420


>gi|198274366|ref|ZP_03206898.1| hypothetical protein BACPLE_00511 [Bacteroides plebeius DSM 17135]
 gi|198272732|gb|EDY97001.1| hypothetical protein BACPLE_00511 [Bacteroides plebeius DSM 17135]
          Length = 630

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/313 (10%), Positives = 91/313 (29%), Gaps = 49/313 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIR----KNAGVK----LLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L N ++          +  G +    ++  +K      + + +  +     
Sbjct: 59  PMLVRFPDILDNRIEKISNCFTQASEEYGYQAQNFIIYPIKVNQMRPVVEEIISHGKKFN 118

Query: 53  DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLN 105
            G  + S  E+          ++      YKD            +     ++   +++L 
Sbjct: 119 LGLEAGSKPELHAVIAINTDSDSLIICNGYKDESYIELALLAQKMGKRIFLVVEKLNELR 178

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESE--------IK 156
                A++L+ +  + I   ++ S     + +    S+ G    + +E+           
Sbjct: 179 LIAKMAKQLNVRPNIGIRIKLASSGSGKWEESGGDASKFGLTSSELLEALDFLEKKEMQD 238

Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213
            +  + FH   +    +              +       +E++ +GGG+          +
Sbjct: 239 CLKLIHFHIGSQVTKIRRIKTALREASQFYVQLHQLGFPVEFVDIGGGLGVDYDGTRSAN 298

Query: 214 FCQRLKEFSEKY------------------SVQIYLEPGEAIVTNTTTLNTTVLDISENI 255
               +    ++Y                     I  E G ++  + + L   VL+ +   
Sbjct: 299 SESSVNYSIQEYVNDSISIMVDASNKNNIPHPNIITESGRSLTAHHSVLIFEVLETASLP 358

Query: 256 KNLVIVDSSVEAH 268
                 + S + H
Sbjct: 359 SMDEDFEVSADDH 371


>gi|317049417|ref|YP_004117065.1| arginine decarboxylase [Pantoea sp. At-9b]
 gi|316951034|gb|ADU70509.1| arginine decarboxylase [Pantoea sp. At-9b]
          Length = 658

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 77/262 (29%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLD----TALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L          R++ G K    L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINGAFKRARESYGYKGDYFLVYPIKVNQHKRVIESLVNSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        L +   ++   ++++   
Sbjct: 147 LEAGSKAELMAVLAHAGKTRTVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMTEVRMV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIKN--------V 158
            ++A++L+    L I   ++         +     + G      ++             +
Sbjct: 207 LEEAERLNVVPRLGIRARLASQGSGKWQSSGGEKSKFGLAASQVLQLVEIMRKAGRIESL 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELAKLGVNIKCFDVGGGLGVDYEGTRSQSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  +    G+A 
Sbjct: 327 S-VNYGLNEYANNVIWAIGDAC 347


>gi|16329179|ref|NP_439907.1| arginine decarboxylase [Synechocystis sp. PCC 6803]
 gi|15214305|sp|P72587|SPEA2_SYNY3 RecName: Full=Biosynthetic arginine decarboxylase 2; Short=ADC 2
 gi|1651659|dbj|BAA16587.1| arginine decarboxylase [Synechocystis sp. PCC 6803]
          Length = 659

 Score = 63.2 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 48/345 (13%), Positives = 102/345 (29%), Gaps = 59/345 (17%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVK--------LLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L + L+        A  +         +  +KC     + + L ++     
Sbjct: 79  PLLIRFSDILADRLERLNSCFAKAIARYNYPNTYQAVYPVKCNQQRHLVEALVRFGQTSQ 138

Query: 53  DGTTSSSLYEVMLGHEKFGG---------ETHAYNVAYKDCEIDAVL------SNCDTII 97
            G  + S  E+M+                +       YKD +            +   II
Sbjct: 139 CGLEAGSKPELMIALATLPPPLDRQDKHTKPLIICNGYKDQDYLETALLAKRLGHRPIII 198

Query: 98  FNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKF---ILADPNRPFSRLGEKCKDKIESE 154
              + +L      +Q+L+ K  L +   +S        ++  N   ++LG    D +   
Sbjct: 199 IEQLRELEWVLHISQQLNIKPMLGVRARLSCQSLKSSEISSGNGDRAKLGLTMPDIVTVI 258

Query: 155 IK--------NVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIH 203
            +         +  L FH   +          ++   +   E      ++ ++++GGG+ 
Sbjct: 259 HRLEENNCLDCLKMLHFHLGTQVSDIALIKEAMREASQLYVELVKLGAKMRYLNVGGGLA 318

Query: 204 FTD----------KDYPVKDFCQRLKEFSEK-------YSVQIYLEPGEAIVTNTTTLNT 246
                        K+Y ++++   +    +            +  E G AI+ + + L  
Sbjct: 319 VDYDGSKTNYPASKNYNMQNYANDIVAAIQDACELGQVSPPILVSESGRAIMAHQSVLVF 378

Query: 247 TVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAM 291
            VL  S              AH     L++   TI          
Sbjct: 379 DVLG-SNQTGFSEPHPPDENAHPLLKNLWECYETITAEQYQEQYH 422


>gi|170078414|ref|YP_001735052.1| arginine decarboxylase [Synechococcus sp. PCC 7002]
 gi|169886083|gb|ACA99796.1| arginine decarboxylase [Synechococcus sp. PCC 7002]
          Length = 644

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 42/316 (13%), Positives = 86/316 (27%), Gaps = 51/316 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52
           P+ +     L + ++        A          + +  +KC     + + L +      
Sbjct: 72  PFLIRFPDILRDRIERLQDCFATAIARYDYPNHYRGVYPVKCNQQRHLVEDLVELGRTHH 131

Query: 53  DGTTSSSLYEVMLGHEKFGG----ETHAYNVAYKDCEIDAVL------SNCDTIIFNTVS 102
            G  + S  E+M+           E       YKD              +   I+     
Sbjct: 132 LGLEAGSKPELMIAIALLEPEADQERLLICNGYKDQHYIETALLATQLGHRALIVIEQPE 191

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------S 153
           +L+     +Q L  +  L I   ++         +     + G      +          
Sbjct: 192 ELDLVIRASQSLGIRPMLGIRAKLASRGIGRWGGSSGDRAKFGLTIPQILRLVEKLQAEE 251

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---- 206
            +  +  L +H   +                I  E       + ++ +GGG+        
Sbjct: 252 MLDCLQLLHYHIGSQLSSISVVKSAIREASQIYVELVKLGAPMGFLDVGGGLAVDYSGSK 311

Query: 207 ------KDYPVKDFCQRLKEFSEKYSVQI-------YLEPGEAIVTNTTTLNTTVLDISE 253
                 K+Y ++++   +    +    +          E G AI ++   L   VL  SE
Sbjct: 312 NNFPSSKNYNMQNYANDVVATVQDTCDETNVPVPVLVSESGRAIASHQAVLIFDVLGSSE 371

Query: 254 NIKNLVIVDSSVEAHV 269
               L       E  V
Sbjct: 372 VDPILPPKPDYKEHLV 387


>gi|86130427|ref|ZP_01049027.1| Orn/DAP/Arg decarboxylase [Dokdonia donghaensis MED134]
 gi|85819102|gb|EAQ40261.1| Orn/DAP/Arg decarboxylase [Dokdonia donghaensis MED134]
          Length = 487

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 54/398 (13%), Positives = 111/398 (27%), Gaps = 61/398 (15%)

Query: 13  KLLNNLDTALYIRKNAGVKLLLAL--------KCFAAWGMFDTLNQYMDGTTSSSLY--- 61
           K+ +N++ A      A  +   A         K      + D   +      +SS +   
Sbjct: 52  KISDNINRAKTWFAAAIKEHNYAGSYNYCYCTKSSHFKHVLDEALKNDIHIETSSAFDID 111

Query: 62  --EVMLGHEKFGGETHAYNVAYKDCEIDAV------LSNCDTIIFNTVSQLNKFKDKAQK 113
             E +    K   +T      +K  +            + + I      +       A  
Sbjct: 112 IVENLKAQGKINDDTFVICNGFKRDQYVQNIARLINNGHKNCITVIDNYEEITLLSDAID 171

Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKC--KDKIESEIKNVNGLMFHNNCENKS 171
            +  IG+RI                   +       K+  ++    +  L F  N   + 
Sbjct: 172 GNYNIGIRIASEEEPKFEFYTSRLGLGYKNIVPFFNKEIKDNPKVTLKMLHFFINTGIRD 231

Query: 172 FLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKY 225
              +         +          ++ +++GGG    +    DY        +    ++ 
Sbjct: 232 TAYYWNELLKCMKVYIALKKVCPSLDSLNIGGGFPIKNSLAFDYDYAYMVSEIIGQIKQT 291

Query: 226 S-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLLYQ 276
                     I+ E G   V  +      VL   +        I++SS    +PD     
Sbjct: 292 CDEAGVAVPHIFTEFGSFTVGESGGAIYQVLYQKQQNDREKWNIINSSFITTIPDTWAIN 351

Query: 277 ESATIY----PNTGPYTAMVCGRSCLAGDI-----------FGEFHFEKPVKIGDRISFE 321
           +   +             ++ G +C + D              +++ +KP+ IG    F 
Sbjct: 352 KRFVMLAINGWQKEYERVLLGGLTCDSDDYYNSEQHMNGIYLPKYNKDKPLYIG----FF 407

Query: 322 DVAGYNINRKNWFNG-----INMPTIAVKNVDGTIKAI 354
           +   Y  +    F G     I  P   + + D   K +
Sbjct: 408 NTGAYQESIG-GFGGLQHCLIPTPKHVLIDRDEDGKLV 444


>gi|73974229|ref|XP_858529.1| PREDICTED: similar to ornithine decarboxylase antizyme inhibitor
           isoform 5 [Canis familiaris]
          Length = 154

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 35/105 (33%), Gaps = 5/105 (4%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           +++ D  K++        I     +K    +KC +   + + L     G   SS  E+ L
Sbjct: 40  FFVGDLGKIVKKHSQWQNIVAQ--IKPFYTVKCNSTPAVLEILAALGTGFACSSKTEMAL 97

Query: 66  GHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKF 107
             E     E   Y    K       A     +T+  +   +L K 
Sbjct: 98  VQELGVSPENIIYISPCKQVSQIKYAAKIGVNTMTCDNEVELKKI 142


>gi|304396746|ref|ZP_07378626.1| arginine decarboxylase [Pantoea sp. aB]
 gi|304355542|gb|EFM19909.1| arginine decarboxylase [Pantoea sp. aB]
          Length = 658

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 36/274 (13%), Positives = 78/274 (28%), Gaps = 31/274 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINAAFKRARESYGYKGDYFLVYPIKVNQHKRVIESLIHSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   ++++   
Sbjct: 147 LEAGSKAELMAVLAHAGQTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVLEKMTEVRLV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIKN--------V 158
            ++A++L+    L I   ++         +     + G      ++             +
Sbjct: 207 LEEAERLNVVPRLGIRARLASQGSGKWQSSGGEKSKFGLSATQVLKLVEIMREAGRIDSL 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 267 QLLHFHLGSQMSNIRDIATGVRESARFYVELAKLGVNIKCFDVGGGLGVDYEGTRSQSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVL 249
             +     +Y+  +    G A        + TV+
Sbjct: 327 S-VNYGLNEYANNVIWAIG-AACDEHGLEHPTVI 358


>gi|37499419|gb|AAQ91788.1| Ornithine Decarboxylase [Metarhizium anisopliae]
          Length = 276

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 37/275 (13%), Positives = 69/275 (25%), Gaps = 30/275 (10%)

Query: 54  GTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112
           G   +S  E+          E   Y    +       + N         +    +K    
Sbjct: 1   GFDCASKGEIEQVLAMGTTPERIIYAQPCETNSYVRFVKNAGVKQMTFDNADELYKIAKL 60

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN--- 169
               ++ LRI    + S   L+          E      ++   NV G+ FH        
Sbjct: 61  YPEAELFLRIMTDDASSLCRLSMKFGATMDTTESLLAVAKNLGLNVVGVSFHVGSGASDP 120

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGI-HFTDKDYPVKDFCQRLKEFSEKYSVQ 228
            +F         + ++   F   +  + +GGG    T +           + F     + 
Sbjct: 121 LAFYKAVRDAHAVFQQAAEFGFTMRTLDVGGGFCGDTFEQMSSVLRDALDESFPAGNGID 180

Query: 229 IYLEPGEAIVTNTTTLNTTVLD---------------ISENIKNLVIVDSSVEAHVPDYL 273
           I  EPG   V+   T+   ++                +  N        S +  H     
Sbjct: 181 IIAEPGRYYVSTAFTIACNIIARRTVEDPTLDGKGYMVYINDGVYGNFSSIMFDHQHPVA 240

Query: 274 ----------LYQESATIYPNTGPYTAMVCGRSCL 298
                         +A            + G +C 
Sbjct: 241 KILRSSGRTLYNTATANACNAGEGVEYSIWGPTCD 275


>gi|163869624|gb|ABY47890.1| arginine decarboxylase [Oryza sativa Japonica Group]
          Length = 702

 Score = 62.9 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 33/260 (12%), Positives = 71/260 (27%), Gaps = 34/260 (13%)

Query: 12  QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
             L + ++        A          + +  +KC     + + + ++      G  + S
Sbjct: 118 DVLRHRVEALNAAFDYAVRSTGYGGRYQGVYPVKCNQDRHVVEDIVEFGEPFRFGLEAGS 177

Query: 60  LYEVMLGH----EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
             E++L       +   +       YKD E  ++     T+  NTV  L + ++    + 
Sbjct: 178 KPELLLAMSCLAARGNPDALLICNGYKDDEYVSLALIARTMGLNTVIVLEQEEELDIMVD 237

Query: 116 KKIGLRINPSVSY-------SKFILADPNRPFSRLGEKCKDKIES--------EIKNVNG 160
               L + P V                 +    + G      +           +  +  
Sbjct: 238 ASRRLGVRPVVGMRAKLRTKHAGHFGSTSGEKGKFGLNAAQILSVVAKLKTLGMLDCLQL 297

Query: 161 LMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR 217
           L FH   +  +             I  E       +  I +GGG+               
Sbjct: 298 LHFHIGSQIPTTALLGDGVGEAAQIYCELARLGAAMRVIDVGGGLGIDYDGSHSAQTDMS 357

Query: 218 LKEFSEKYSVQIYLEPGEAI 237
           +    E+Y+  +    G   
Sbjct: 358 VAYSLEEYAAAVVAAVGRVC 377


>gi|195363107|ref|XP_002045570.1| GM11484 [Drosophila sechellia]
 gi|194130730|gb|EDW52773.1| GM11484 [Drosophila sechellia]
          Length = 114

 Score = 62.9 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 19/61 (31%), Gaps = 2/61 (3%)

Query: 6  YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
            + D   L   L     +     ++   A+KC     +   L     G   +S  E+ L
Sbjct: 33 LNICDLSSLERKLRLWHKLMPR--IEPHYAVKCNDDPVVVKFLADLGTGFDCASKNELKL 90

Query: 66 G 66
           
Sbjct: 91 V 91


>gi|196229714|ref|ZP_03128578.1| arginine decarboxylase [Chthoniobacter flavus Ellin428]
 gi|196226040|gb|EDY20546.1| arginine decarboxylase [Chthoniobacter flavus Ellin428]
          Length = 643

 Score = 62.9 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 21/227 (9%), Positives = 59/227 (25%), Gaps = 31/227 (13%)

Query: 12  QKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSS 59
             L + ++T                  + +  +K      + + +         G  + S
Sbjct: 67  DLLRDRVETINKAFAAAMQEANYRNEYRGVFPIKVNQLREVVEEIVDAGAPYHFGIEAGS 126

Query: 60  LYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
             E++         E+      YKD            +    +  + K ++ A+ L    
Sbjct: 127 KPELLAAMAIHRDHESLIICNGYKDKLFIENALLGRKLGKKVILVVEKIEELAEILRVSK 186

Query: 119 GLRINPSVSYS-------KFILADPNRPFSRLGEKCKDKIES--------EIKNVNGLMF 163
            + + P +              A      ++ G    + + +            +  + F
Sbjct: 187 EVGVEPMIGIRVRLAAKGAGKWATSGGENAKFGVSTAELVAASELLKKEGLPNALKLVHF 246

Query: 164 HNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207
           H   +     +             +      ++ ++ +GGG+     
Sbjct: 247 HVGSQVPDIGTIKRAVREAARFYSKLHKLGHELGYLDVGGGLGVDYD 293


>gi|254413160|ref|ZP_05026932.1| arginine decarboxylase [Microcoleus chthonoplastes PCC 7420]
 gi|196180324|gb|EDX75316.1| arginine decarboxylase [Microcoleus chthonoplastes PCC 7420]
          Length = 699

 Score = 62.9 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 39/313 (12%), Positives = 90/313 (28%), Gaps = 48/313 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L + ++        A          + +  +KC     + + L Q      
Sbjct: 95  PLLIRFSDILADRIERLNACFAKAIARYNYPGRYQGVYPVKCNQHRHLVEELVQVGHPYQ 154

Query: 53  DGTTSSSLYEVMLGHEKFGGE-THAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLN 105
            G  + S  E+M+       +        +KD E                I+   + ++ 
Sbjct: 155 FGLEAGSKPELMIALATLKTDGALLICNGHKDREYIETALLSMRLGQKPIIVIEQLEEVQ 214

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK-------- 156
              D + KL  +  + +   +S         +     + G    + +    +        
Sbjct: 215 LVIDISAKLGIEPIVGVRAKLSTKGSGRWGESTGDRAKFGLTLPEILSGVNQLRDAGLLN 274

Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD------- 206
            +  L FH   +                I  E       + ++ +GGG+           
Sbjct: 275 ALQLLHFHIGSQTSAISVIKDAIREASQIYVELRALGANMNYLDVGGGLAIDYDGSKTNF 334

Query: 207 ---KDYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
              K+Y ++++   +    ++           +  E G AI ++ + L   VL+ S+ + 
Sbjct: 335 HASKNYNMQNYANDIVAEVKEACEARQIPAPVLISESGRAIASHQSVLIFDVLNTSDVLS 394

Query: 257 NLVIVDSSVEAHV 269
                    E  +
Sbjct: 395 GEPAPAHQNEHLI 407


>gi|213022569|ref|ZP_03337016.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Typhi str. 404ty]
          Length = 468

 Score = 62.9 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 65  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 124

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 125 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 184

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 185 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRDAGRLDSL 244

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 245 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 304

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  I    G+A   +
Sbjct: 305 S-VNYGLNEYANNIIWAIGDACEEH 328


>gi|308188031|ref|YP_003932162.1| biosynthetic arginine decarboxylase [Pantoea vagans C9-1]
 gi|308058541|gb|ADO10713.1| biosynthetic arginine decarboxylase [Pantoea vagans C9-1]
          Length = 658

 Score = 62.9 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 73/262 (27%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINAAFKRARESYGYKGDYFLVYPIKVNQHKRVIESLIHSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   ++++   
Sbjct: 147 LEAGSKAELMAVLAHAGQTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVLEKMTEVRLV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIKN--------V 158
            ++A +L+    L I   ++         +     + G      ++             +
Sbjct: 207 LEEAGRLNVVPRLGIRARLASQGSGKWQSSGGEKSKFGLSATQVLKLVEIMREAGRIDSL 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 267 QLLHFHLGSQMSNIRDIATGVRESARFYVELAKLGVNIKCFDVGGGLGVDYEGTRSQSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  +    G A 
Sbjct: 327 S-VNYGLNEYANNVIWAIGAAC 347


>gi|186686305|ref|YP_001869501.1| arginine decarboxylase [Nostoc punctiforme PCC 73102]
 gi|186468757|gb|ACC84558.1| arginine decarboxylase [Nostoc punctiforme PCC 73102]
          Length = 672

 Score = 62.9 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 86/288 (29%), Gaps = 48/288 (16%)

Query: 12  QKLLNNLDTALYIRKN-------AGV-KLLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
             L + ++                GV + +  +KC     + + L ++      G  + S
Sbjct: 109 DILEDRIERLNACFAKAIARYNYPGVYRGVFPVKCNQERHLIEDLVKFGKPHQFGLEAGS 168

Query: 60  LYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLNKFKDKAQ 112
             E+M+                YKD E                I+   + +++   D  +
Sbjct: 169 KPELMIALAVLDTPGALLVCNGYKDREYIETAMLAQRLGQTPIIVLEQIEEVDLVIDANR 228

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNVNGLMF 163
           +L  K  L +   +S         +     + G    + IE+           ++  + F
Sbjct: 229 QLGIKPILGVRAKLSTQGMGRWGASSGDRAKFGLTMPEVIEAVDKLREANLLDSLQLMHF 288

Query: 164 HNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD----------KDYP 210
           H   +                I  E       ++++ +GGG+              K+Y 
Sbjct: 289 HIGSQISAINVIKDAIQEASRIYVELAMLGADMKYLDVGGGLGVDYDGSQTNFYASKNYN 348

Query: 211 VKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDI 251
           ++++   +    +            +  E G AI ++ + L   VL  
Sbjct: 349 MQNYANDIVAELKDTCAERQITVPTLISESGRAIASHQSVLIFDVLST 396


>gi|33860605|ref|NP_892166.1| arginine decarboxylase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
 gi|48474802|sp|Q7V3M9|SPEA_PROMP RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|33633547|emb|CAE18504.1| Orn/DAP/Arg decarboxylases family 2 [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
          Length = 648

 Score = 62.9 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 44/316 (13%), Positives = 96/316 (30%), Gaps = 48/316 (15%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAG--------VKLLLALKCFAAWGMFDTLNQYMD 53
           I TP  +     L + +         A          K +  +KC     + + + +Y D
Sbjct: 66  INTPLIIRFNDILKDRIAELNNAFSQAIETYDYKNIYKGVFPIKCNQQRNVLEKIIEYGD 125

Query: 54  ----GTTSSSLYEVMLGHEKFGGET-HAYNVAYKDCEIDAVLSN------CDTIIFNTVS 102
               G    S  E+++G      +        YKD +                I+     
Sbjct: 126 RWNFGLEVGSKSELLIGLSILENQKSLLICNGYKDKKYIETAILARKLGKHPIIVIEQRD 185

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKI--------ES 153
           ++ +  +  + L     L I   +S       +      S+ G    + +         +
Sbjct: 186 EVKRIIEAVKDLKATPILGIRSKLSSKSSGRWSKSVGDNSKFGLSIPEIMLTIKELKEAN 245

Query: 154 EIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDK--- 207
            I  +  L FH   +          L+   + F         +++I +GGG+        
Sbjct: 246 LINEMMLLHFHVGSQISDISVIKDALQEASQIFVELSKLGAPMKYIDVGGGLGIDFDGTK 305

Query: 208 -------DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISE 253
                  +Y ++++   +    +            I  E G AI+++ + L   +L  S 
Sbjct: 306 MSSNTSTNYSLQNYANDVIATVKDSCEVNNIQHPIIISESGRAIISHCSVLIFNILGTSH 365

Query: 254 NIKNLVIVDSSVEAHV 269
               + + D   ++ +
Sbjct: 366 VSSQVKVSDQKKQSLI 381


>gi|189220118|ref|YP_001940758.1| arginine decarboxylase [Methylacidiphilum infernorum V4]
 gi|189186976|gb|ACD84161.1| Arginine decarboxylase [Methylacidiphilum infernorum V4]
          Length = 668

 Score = 62.9 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 81/311 (26%), Gaps = 47/311 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  L  +  L + +       K A          + +  +K      + + +        
Sbjct: 68  PLLLRFQDLLRHRVLNLNQAFKEAIEEADYRGKYRAVFPIKVNQLREVIEEIVDAGSPFH 127

Query: 54  -GTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK----- 106
            G  + S  E+          E       +KD      +     +    +  L K     
Sbjct: 128 HGLEAGSKAELFAALAMLKDSEALLICNGFKDRLFVDSIFLGRKLGKKVIQVLEKVEELD 187

Query: 107 --FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE--------SEIK 156
                 ++     I        S  +   A  +   ++ G    + ++            
Sbjct: 188 LVIDGLSRFKVDPIIGVRIQLASKGRGHWAYSSGDEAKFGLSTAELLQVIQRLKENHLSH 247

Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK------ 207
            +  + FH   +    L     ++   + +         I++I +GGG+           
Sbjct: 248 CLQLIHFHIGSQIPDILTIKRAVREAARYYARLYQLGFPIQYIDVGGGLGVDYDGSRSTD 307

Query: 208 ----------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN 257
                        +      +    +     I  E G A+V   + L   VL   + IK 
Sbjct: 308 SSINYSLQEYARDIVYNIAEICNEEKVPHPTIVTESGRAVVAYHSVLIVDVLGTIQKIKP 367

Query: 258 LVIVDSSVEAH 268
             +   S  ++
Sbjct: 368 AGLQPLSFHSN 378


>gi|162450725|ref|YP_001613092.1| arginine decarboxylase [Sorangium cellulosum 'So ce 56']
 gi|161161307|emb|CAN92612.1| arginine decarboxylase [Sorangium cellulosum 'So ce 56']
          Length = 647

 Score = 62.9 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 27/237 (11%), Positives = 64/237 (27%), Gaps = 31/237 (13%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM- 52
           ++TP  +  +  L + +         A          + +  +K      + + +     
Sbjct: 65  LRTPLLIRFQDLLHHRVRALNEAFNRAIAESKFRGTYRGVFPIKVNQLREVVEEILDAGK 124

Query: 53  ---DGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSN------CDTIIFNTVS 102
               G    S  EV  G       E+      YKD                  +I   +S
Sbjct: 125 TYHYGVEVGSKPEVFAGLSVHTDPESLIVCNGYKDDNFIRTALIGRKLGKKVILIAEKLS 184

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPN-RPFSRLGEKCKDKIESEIKN---- 157
           ++      A++++ +  + +   +          +    ++ G    + + +        
Sbjct: 185 EVRMITRVAKEMNVEPMIGLRVRLLTEGAGKWKTSGGENAKFGLSTAEILAAIRIMDEAG 244

Query: 158 ----VNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207
                  L FH   +                   +      +IE+I +GGG+     
Sbjct: 245 MSSSFKLLHFHIGSQVPDILIIKRAVREATRYYAKLRKMGQRIEYIDVGGGLAIDYD 301


>gi|320333839|ref|YP_004170550.1| Biosynthetic arginine decarboxylase [Deinococcus maricopensis DSM
           21211]
 gi|319755128|gb|ADV66885.1| Biosynthetic arginine decarboxylase [Deinococcus maricopensis DSM
           21211]
          Length = 636

 Score = 62.9 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 39/351 (11%), Positives = 101/351 (28%), Gaps = 60/351 (17%)

Query: 12  QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
           Q L   +       + A          + +  +K      + +T+ Q       G  + S
Sbjct: 68  QILAGRVRQLNEAFRKAIQEYGYTGNYQGVFPIKVNQRRMVVETIAQAGYDYAHGLEAGS 127

Query: 60  LYEVMLGHE-KFGGETHAYNVAYKDCE------IDAVLSNCDTIIFNTVSQLNKFKDKAQ 112
             E+ L                +KD            L     I     S+L++   +A+
Sbjct: 128 KAELALCLAQDMHPNALLCCNGFKDDGFIKLALWGRTLGKNVVITIEKYSELDRILKQAR 187

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNVNGLMF 163
            L  K  + +   +      + + +     + G    + +           + ++  L  
Sbjct: 188 ALGVKPAIGVRFKLHARGSGMWEESGGDQAKFGLNAYELLRVVERLREEDMLDSLVMLHT 247

Query: 164 HNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDK----------DYP 210
           H   +          ++   + +         ++++++GGG+               +Y 
Sbjct: 248 HIGSQITDIRRVKVAVREATQVYAGLVADGVPLKYLNVGGGLGVDYDGSKTTFYVSTNYT 307

Query: 211 VKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDS 263
           ++++   +    ++           I  E G A+  +   L   V+D++    ++     
Sbjct: 308 MQEYASDIVYTVQETCKAREVAEPTIVSESGRALTAHHAVLIVPVVDVTGPTLDVQA--- 364

Query: 264 SVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLA--GDIFGEFHFEKPV 312
                +P     Q    +  +       + GR+      D  G+      +
Sbjct: 365 -----IPPAQEGQ--HQVVTDMEEILGNISGRNYREMYNDAVGDKQTLHNL 408



 Score = 38.6 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/96 (13%), Positives = 23/96 (23%), Gaps = 24/96 (25%)

Query: 296 SCLAGDIFGEFHFEKPVKI--------GD--RISFEDVAGYNINRKNWFNGINMPTIA-- 343
           +C +     +F   + VK         GD   + F  +  Y     +  N     + A  
Sbjct: 500 TCDSDGKIEKFIDLRDVKATLPLHALDGDPYYLGFFLMGAYQDVLGSAHNLFGKVSEAHV 559

Query: 344 ------------VKNVDGTIKAIREFSYNDYYNNLS 367
                               + I    Y +     S
Sbjct: 560 TARPGGKYHIDLFVRGQKARRMIESMGYEEAMLRES 595


>gi|284929128|ref|YP_003421650.1| arginine decarboxylase [cyanobacterium UCYN-A]
 gi|284809587|gb|ADB95292.1| arginine decarboxylase [cyanobacterium UCYN-A]
          Length = 534

 Score = 62.9 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 34/313 (10%), Positives = 85/313 (27%), Gaps = 48/313 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVK--------LLLALKCFAAWGMFDTLNQYMD--- 53
           P  +     + + ++        A V+         +  +K      + +++  Y     
Sbjct: 61  PLLVHFPDIIEDRIEQLNNCFAKAMVRYSYDGSYQGVFPIKVNQQRHIVESIVNYGYKHK 120

Query: 54  -GTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA 111
            G    S  E+++   +     +      YKD +          + +N +  + +  +  
Sbjct: 121 YGLEVGSKPELLIALAQLKNSNSLLICNGYKDKKYVETAVIAYHLGYNILIVVEQLSEIY 180

Query: 112 ------QKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK-------- 156
                  +   K  L I   +S         +     + G    + I +  +        
Sbjct: 181 LVADVVLEHGIKPNLGIRAKLSAKGDSRWADSAGDRAKFGLSVTEIICALDQLRKSEMLT 240

Query: 157 NVNGLMFHNNCENKSFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213
            +  L FH   +  +             I          +E+  +GGG+           
Sbjct: 241 KLKLLHFHIGSQISAIATIKDALSEASQIYVNLCQLGAPMEYFDVGGGLGIDYDGSNTNF 300

Query: 214 FC--------------QRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISENIK 256
                             +K       ++   I  E G ++ ++ + L   VL I +  +
Sbjct: 301 PASKNYSMQNYANDVVAAIKTACNNNDIEVPVIVSESGRSVASHQSILIVNVLGIDKIEE 360

Query: 257 NLVIVDSSVEAHV 269
               ++      +
Sbjct: 361 FNDTIEIENCHTL 373


>gi|67551182|gb|AAY68498.1| MccE [Escherichia coli]
          Length = 508

 Score = 62.9 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 33/322 (10%), Positives = 81/322 (25%), Gaps = 24/322 (7%)

Query: 58  SSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            S+ E+ L                K  E+   +     I  + + +  +  +  +     
Sbjct: 2   CSVDEMNLAKRDGFNRIVFDGPLKKTSELLKAIEIGALIEVDNIDECKRLNELCKLHKLT 61

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
             + +  S  Y   +          +        +SE   ++G   H      +      
Sbjct: 62  CRIHLRLSHYYDDNLSRFGLSESEAINLLEMLISKSEYLILDGFHLHVGSNLPNAEKICK 121

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIH-------FTDKDYPVKDFCQRLKEFSEKYS---- 226
            +    +    ++     ++LG GI          +     + F   + +  +       
Sbjct: 122 AVIQYHELILRYMPDDGTLNLGSGIPADSFSASSDNPTPCPEVFFSSIYDTIKNCFGTVC 181

Query: 227 --VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE------S 278
                  EPG  +V +       V+         V   +     +P    +        +
Sbjct: 182 DKWNYIFEPGRHLVEDFGYFIGKVISTKNRYGVKVAQTNIGINWIPSIRNWDHSFTLFHN 241

Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRIS-FEDVAGYNINRKNWFNGI 337
                +      ++ G +C   D            + D +        Y++   N +   
Sbjct: 242 HNHISDDKSDEYIIAGFNCFECDCLFPSVILPS-NLSDYLFSVRGCGAYDMQTGNQW-TR 299

Query: 338 NMPTIAVKNVD--GTIKAIREF 357
           N+  +     D     +  R  
Sbjct: 300 NLYAVYTITNDVVNISRIHRRE 321


>gi|197285941|ref|YP_002151813.1| arginine decarboxylase [Proteus mirabilis HI4320]
 gi|227356449|ref|ZP_03840837.1| biosynthetic arginine decarboxylase [Proteus mirabilis ATCC 29906]
 gi|226732569|sp|B4F1A4|SPEA_PROMH RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|194683428|emb|CAR44185.1| biosynthetic arginine decarboxylase [Proteus mirabilis HI4320]
 gi|227163559|gb|EEI48480.1| biosynthetic arginine decarboxylase [Proteus mirabilis ATCC 29906]
          Length = 635

 Score = 62.5 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 38/329 (11%), Positives = 84/329 (25%), Gaps = 38/329 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +       A           L+  +K      + ++L       G
Sbjct: 63  PALFCFPQILQHRLRSINAAFHRARESYGYKGDYFLVYPIKVNQQRRVIESLINAGEPLG 122

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        L +   ++   +S++   
Sbjct: 123 LEAGSKAELMAVLAHANMTSSVIVCNGYKDREYIRLALTGEKLGHKVFLVIEKMSEIKMV 182

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            ++A++L     L +   ++         +     + G      ++            ++
Sbjct: 183 LEEAERLEVIPRLGVRARLASQGSGKWQASGGEKSKFGLAATQVLQLIDTLRQAGRLDSL 242

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I++  +GGG+    +    +  C
Sbjct: 243 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQYFDVGGGLGVDYEGTRSQSDC 302

Query: 216 QRLKEFSEKYSVQIYLEPGEAI------VTNTTTLNTTVLDISENIKNLVIVDSSVEAH- 268
             +     +Y+  +    G+A            T +   L     +    ++        
Sbjct: 303 S-VNYGLNEYANNVIWAIGDACDENELPHPTVITESGRALTAHHTVLISNVIGVERNEFT 361

Query: 269 -VPDYLLYQESATIYPNTGPYTAMVCGRS 296
            +                        G S
Sbjct: 362 AITPPAEDAPRPIASLWETWEEMQTKGNS 390


>gi|3914997|sp|Q43075|SPE1_PEA RecName: Full=Arginine decarboxylase; Short=ADC; Short=ARGDC
 gi|609220|emb|CAA85773.1| arginine decarboxylase [Pisum sativum]
          Length = 728

 Score = 62.5 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 28/262 (10%), Positives = 77/262 (29%), Gaps = 33/262 (12%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +     L + L++               +  + +  +KC     + + + ++     
Sbjct: 121 PLVVRFPDVLKDRLESIHAAFDGAIQLQGYESHYQGVYPVKCNQDRYIVEDIVEFGSSFR 180

Query: 54  -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
            G  + S  E++L          E       +KD E  ++            I+     +
Sbjct: 181 FGLEAGSKPELLLAMSCLCKGNREAFLVCNGFKDSEYISLALIARKLALNTVIVLEQEEE 240

Query: 104 LNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SE 154
           L+   + + KL  +  + +   +                + G      +           
Sbjct: 241 LDMVVEISNKLCIRPVIGVRAKLKTKHSGHFGATSGDKGKFGLTTIQILHVVKKLEQLDM 300

Query: 155 IKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPV 211
           +  +  L FH   +  +    +  ++   + +        Q++ + +GGG+         
Sbjct: 301 LDCLQLLHFHIGSQIPTTELLADGVREASQIYCELLRLGAQMKVLDIGGGLGIDYDGSKS 360

Query: 212 KDFCQRLKEFSEKYSVQIYLEP 233
            D  + +    E+Y+  +    
Sbjct: 361 GDSDESVAYGLEEYAAAVVHAV 382


>gi|167909410|ref|ZP_02496501.1| pyridoxal-dependent decarboxylase family protein [Burkholderia
           pseudomallei 112]
          Length = 212

 Score = 62.5 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 58/173 (33%), Gaps = 8/173 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60
           + TP Y+ D Q +L             G +L+++LK  +   +     + + DG   +S 
Sbjct: 25  LDTPCYVFDPQCVLAGYAALRAAL---GTRLVVSLKANSHADLFLRCAHAFEDGIELASQ 81

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+     +     +  N A  D  + A +++    I +    + +F   A     +  +
Sbjct: 82  GELDTVVGRGKHVKYLNNPAMGDALMRAGIASRCHFILDGPDMVRRFIALASGKETEDVM 141

Query: 121 RINPS----VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN 169
               +     +++   L D             + +    + V GL       N
Sbjct: 142 LRINAGALLGAHAPKSLRDHFGMTPAEALGMANLLTQAGRRVAGLHAFVGSGN 194


>gi|115466192|ref|NP_001056695.1| Os06g0131300 [Oryza sativa Japonica Group]
 gi|12229999|sp|Q9SNN0|SPE1_ORYSJ RecName: Full=Arginine decarboxylase 1; Short=ARGDC1; Short=OsADC1
 gi|6006369|dbj|BAA84799.1| arginine decarboxylase [Oryza sativa Japonica Group]
 gi|47716667|gb|AAT37534.1| arginine decarboxylase [Oryza sativa]
 gi|113594735|dbj|BAF18609.1| Os06g0131300 [Oryza sativa Japonica Group]
 gi|125553918|gb|EAY99523.1| hypothetical protein OsI_21492 [Oryza sativa Indica Group]
          Length = 702

 Score = 62.5 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 33/260 (12%), Positives = 71/260 (27%), Gaps = 34/260 (13%)

Query: 12  QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
             L + ++        A          + +  +KC     + + + ++      G  + S
Sbjct: 118 DVLRHRVEALNAAFDYAVRSTGYGGRYQGVYPVKCNQDRHVVEDIVEFGEPFRFGLEAGS 177

Query: 60  LYEVMLGH----EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
             E++L       +   +       YKD E  ++     T+  NTV  L + ++    + 
Sbjct: 178 KPELLLAMSCLAARGNPDALLICNGYKDDEYVSLALIARTMGLNTVIVLEQEEELDIVVD 237

Query: 116 KKIGLRINPSVSY-------SKFILADPNRPFSRLGEKCKDKIES--------EIKNVNG 160
               L + P V                 +    + G      +           +  +  
Sbjct: 238 ASRRLGVRPVVGMRAKLRTKHAGHFGSTSGEKGKFGLNAAQILSVVAKLKTLGMLDCLQL 297

Query: 161 LMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR 217
           L FH   +  +             I  E       +  I +GGG+               
Sbjct: 298 LHFHIGSQIPTTALLGDGVGEAAQIYCELARLGAAMRVIDVGGGLGIDYDGSHSAQTDMS 357

Query: 218 LKEFSEKYSVQIYLEPGEAI 237
           +    E+Y+  +    G   
Sbjct: 358 VAYSLEEYAAAVVAAVGRVC 377


>gi|269140306|ref|YP_003297007.1| arginine decarboxylase [Edwardsiella tarda EIB202]
 gi|267985967|gb|ACY85796.1| arginine decarboxylase [Edwardsiella tarda EIB202]
 gi|304560131|gb|ADM42795.1| Biosynthetic arginine decarboxylase [Edwardsiella tarda FL6-60]
          Length = 658

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/265 (12%), Positives = 79/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     + A           L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINAAFRRARASFGYQGDYFLVYPIKVNQQRRVIESLVNSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        L +   ++   +S+++  
Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKLSEIDVV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIKNV 158
            ++A++L     L +   ++         +     + G      ++          ++++
Sbjct: 207 LEEAKRLDVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAAVQVLQLVETLRQAGHLESL 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  +    G+A   +
Sbjct: 327 S-VNYGLNEYANNVIWGIGDACNEH 350


>gi|191171887|ref|ZP_03033433.1| arginine decarboxylase [Escherichia coli F11]
 gi|190907922|gb|EDV67515.1| arginine decarboxylase [Escherichia coli F11]
          Length = 632

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 75/262 (28%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+   K      + ++L       G
Sbjct: 61  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPTKVNQHRRVIESLIHSGEPLG 120

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 121 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 180

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            D+A++L+    L +   ++         +     + G      ++            ++
Sbjct: 181 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSL 240

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 241 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 300

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  I    G+A 
Sbjct: 301 S-VNYGLNEYANNIIWAIGDAC 321


>gi|255037181|ref|YP_003087802.1| Orn/DAP/Arg decarboxylase 2 [Dyadobacter fermentans DSM 18053]
 gi|254949937|gb|ACT94637.1| Orn/DAP/Arg decarboxylase 2 [Dyadobacter fermentans DSM 18053]
          Length = 501

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 51/390 (13%), Positives = 108/390 (27%), Gaps = 49/390 (12%)

Query: 12  QKLLNNLDTALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67
           + + N         K    K         K      + +   ++     +SS +++ +  
Sbjct: 54  EHIENANMFFRNAFKRHNYKGTYTYCYCTKSSHFSFVLEEALKHNIHIETSSAFDIPIIR 113

Query: 68  EKFGG---ETHAYNVAYKDCEIDAVLSNCDTII--FNTVSQLNKFKDKAQKLHKKIGLRI 122
           E +         Y +A             + I   FN V  L+  K+      +     +
Sbjct: 114 ELYRRGKVNKSTYILANGYKLPRYTQYLSELINEGFNVVPILDNLKEIESYEQQVTADSV 173

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKD--------KIESEIKNVNGLMFHNNCENK---S 171
           +  +  +     +     SRLG +  D           +    +  L F  N   K    
Sbjct: 174 HFGMRIATDEEPNFAFYTSRLGIRYNDVQQLYKEKIEPNPRFKLKMLHFFINTGIKDSAY 233

Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFT---DKDYPVKDFCQRLKEFSEKYSV- 227
           +            E       ++ I +GGG+         Y  +     + E  +     
Sbjct: 234 YWSELTRFMFKYCEMKKICPDLDSIDIGGGLPIQTSLQSGYDYQQMIDEIIENIQWICNK 293

Query: 228 ------QIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDYLLY-QES 278
                  I+ E G   V  +  +   ++D  +  + +   +++ S    +PD     Q+ 
Sbjct: 294 NNVPVPHIFTEFGSYTVGESGAVIYEIIDKKLQNDKELWYMINGSFITQLPDSWGMNQKY 353

Query: 279 ATIYPNTGPYTAM---VCGRSCLAGDIFGEFHFEKPV-------KIGDRISFEDVAGYNI 328
             +  N          + G +C + D +        +            I F     Y  
Sbjct: 354 IMLPINNWDNPYQKVNLGGLTCDSQDFYNSEMHSADLYMPIFEDNEPQYIGFFHTGAYQE 413

Query: 329 NRKNWFNG-----INMPTIAVKNVDGTIKA 353
           +    + G     I  P   + + D   + 
Sbjct: 414 SLG-GYGGIQHCLIPAPKHVLIDRDDEGRL 442


>gi|225164353|ref|ZP_03726618.1| arginine decarboxylase [Opitutaceae bacterium TAV2]
 gi|224801033|gb|EEG19364.1| arginine decarboxylase [Opitutaceae bacterium TAV2]
          Length = 664

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/227 (10%), Positives = 65/227 (28%), Gaps = 31/227 (13%)

Query: 12  QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYMDGTTSSS 59
             L + ++      ++A          + +  +K      + D +      Y  G  + S
Sbjct: 74  DLLRHRVEQINRCFRDAIKEEGYKGDYRGVFPIKVNQLREVVDEIVDAGKDYGYGLEAGS 133

Query: 60  LYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD------TIIFNTVSQLNKFKDKAQ 112
             E+M+      G +       YKD +   +            I+   +S+++     A 
Sbjct: 134 KPELMIALAMHEGKDRLIICNGYKDLDYIRLALIGRKIGKKIIIVVEQLSEVDDIIAVAA 193

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NVNGLMF 163
           ++  K  +     +          +   + + G    + + +  K         +  + F
Sbjct: 194 EIGVKPMIGFRAKLQTRGEGKWSSSSGDNAKFGLNTAEILFACDKLRKAKLTTALRLVHF 253

Query: 164 HNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207
           H   +     +             +       + ++ +GGG+     
Sbjct: 254 HIGSQVPNILTIKNAVIEASRFYCQLHKMGFPMGYLDVGGGLGIDYD 300


>gi|253988569|ref|YP_003039925.1| arginine decarboxylase [Photorhabdus asymbiotica subsp. asymbiotica
           ATCC 43949]
 gi|253780019|emb|CAQ83180.1| biosynthetic arginine decarboxylase [Photorhabdus asymbiotica]
          Length = 634

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 74/251 (29%), Gaps = 28/251 (11%)

Query: 13  KLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM--DGTTSSSLYEVM-- 64
           +L +        R++ G K    L+  +K      + ++L       G  + S  E+M  
Sbjct: 75  RLRSINAAFRRARESYGYKGDYFLVYPIKVNQQRRVIESLASSGEPLGLEAGSKAELMAV 134

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
           L H          N  YKD E   +    + +       + K  + AQ L +   L + P
Sbjct: 135 LAHAGMTRTVIVCN-GYKDREYIRLALIGEKLGHKVYLVIEKMSEIAQVLEEAERLNVIP 193

Query: 125 S-------VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCE- 168
                    S             S+ G      ++            ++  L FH   + 
Sbjct: 194 RLGVRARLASQGSGKWQASGGEKSKFGLAATQVLQLVETLREVGRLDSLQLLHFHLGSQL 253

Query: 169 --NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226
              +              E       I+   +GGG+    +    +  C  +     +Y+
Sbjct: 254 ANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDCS-VNYGLNEYA 312

Query: 227 VQIYLEPGEAI 237
             +    G+A 
Sbjct: 313 NNVIWGIGDAC 323


>gi|3062801|dbj|BAA25685.1| arginine decarboxylase [Nicotiana sylvestris]
          Length = 621

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 78/268 (29%), Gaps = 36/268 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++   +           A  + +  +KC     + + + ++  G  
Sbjct: 117 PLVVRFPDILKNRLESLQSVFDYAVQSQGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 176

Query: 56  ---TSSSLYEVMLGHEKFGGETH---AYNVAYKDCEID------AVLSNCDTIIFNTVSQ 103
               + S  E++L        +H        +KD E          L     I+     +
Sbjct: 177 FGLEAGSKPELLLAMSCLCKGSHEGLLVCNGFKDAEYISLALVARKLMLNTVIVLEQEEE 236

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+     IGLR      +S    +       + G      +          
Sbjct: 237 LDLVIDISKKMAVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQIVRVVKKLEESG 295

Query: 156 --KNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
               +  L FH   +  S             I  E       +++I  GGG+        
Sbjct: 296 MLDCLQLLHFHIGSQIPSTALLADGVGEAAQIYCELVRLGAGMKYIDCGGGLGIDYDGTK 355

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
             D    +    ++Y+    ++    + 
Sbjct: 356 SCDSDCSVGYGLQEYA-STVVQAVRFVC 382


>gi|126656774|ref|ZP_01727988.1| arginine decarboxylase [Cyanothece sp. CCY0110]
 gi|126621994|gb|EAZ92702.1| arginine decarboxylase [Cyanothece sp. CCY0110]
          Length = 664

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 91/311 (29%), Gaps = 48/311 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +     + + ++       +A          + +  +K      +   +    +   
Sbjct: 95  PLLIHFPDIIEDRIEELNSCFAHAITRYNYEGSYQGVFPIKVNQQRHIVQAIVNCGNNHK 154

Query: 54  -GTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK- 110
            G    S  E+++   +            YKD +          + + T+  + +  +  
Sbjct: 155 YGLEVGSKPELLIALAQLKESNALLICNGYKDQKYIETALLARRLGYQTIVVVEQLSEIK 214

Query: 111 -AQKLHKKIGLRINPSVSYS-----KFILADPNRPFSRLGEKCKDKIESEIK-------- 156
            A    K  G+R    +             +     ++ G    + +E+  +        
Sbjct: 215 LAIDTAKTQGIRPVLGIRAKLSSKGDSRWGNSAGDKAKFGLTISEIMEAIEQLKAAEMLE 274

Query: 157 NVNGLMFHNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTD------- 206
           ++  L FH   +  S             I          +++  +GGG+           
Sbjct: 275 SLQLLHFHIGSQISSIATIKEALTEASQIYVNLSQLGASMKYFDVGGGLGIDYDGSHSHF 334

Query: 207 ---KDYPVKDFC----QRLKEFSEK---YSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
              K+Y ++++       +K   E        I  E G AI ++ + L T VL + +   
Sbjct: 335 PASKNYSMQNYANDVVAAIKIACETQKLKVPIIISESGRAIASHQSVLLTNVLGVDKIPT 394

Query: 257 NLVIVDSSVEA 267
             + ++     
Sbjct: 395 FPIDIEKDKCH 405


>gi|53803634|ref|YP_114478.1| arginine decarboxylase [Methylococcus capsulatus str. Bath]
 gi|53757395|gb|AAU91686.1| arginine decarboxylase [Methylococcus capsulatus str. Bath]
          Length = 625

 Score = 62.5 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/281 (12%), Positives = 76/281 (27%), Gaps = 43/281 (15%)

Query: 14  LLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFD-TLNQYMDGTTSSSLYEVM 64
           L + +         A        G   +  +K      + +  L     G  + S  E++
Sbjct: 72  LHDRVRLLTSAFGKARAAYHYGAGYTPVYPIKVNQQRNVIENILRAGGVGLEAGSKSELL 131

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDT-----IIFNTVSQLNKFKDKAQKLHKKIG 119
                    T   N       I   L          I+   +S+L     +++ L     
Sbjct: 132 AILALAESGTIICNGYKDRAYIRLALIGSRLGLRVFIVVEKLSELELVVSESEALGIAPQ 191

Query: 120 LRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NVNGLMFHNNCE-- 168
           L +   +S         +     + G    + ++   +         V  + FH   +  
Sbjct: 192 LGVRIRLSSISAGKWQNSGGEKSKFGLHAGEILKFLKRLERAGGLGWVRLMHFHMGSQVA 251

Query: 169 -NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK----------DYPVKDFCQR 217
                            E       ++ + +GGG+    +          +Y V ++   
Sbjct: 252 NINDVKTALREASRYYAELRRLGAPVDHVDVGGGLGIDYEGTHSVSDCSINYSVDEYAHS 311

Query: 218 LKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDI 251
           +     +           +  E G A+  +   L T V+DI
Sbjct: 312 IVRAFSELCAEQGLPQPDLITEAGRAMSAHHAVLVTNVVDI 352


>gi|116626724|ref|YP_828880.1| arginine decarboxylase [Candidatus Solibacter usitatus Ellin6076]
 gi|116229886|gb|ABJ88595.1| arginine decarboxylase [Candidatus Solibacter usitatus Ellin6076]
          Length = 637

 Score = 62.1 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/294 (12%), Positives = 82/294 (27%), Gaps = 47/294 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L + L       + A        G   +  +K      + + + ++     
Sbjct: 63  PILIRFADILKHRLGEIHNAFQTAIAEHKYQGGYCCVYPIKVNQQRQVVEEVLEFGKPFR 122

Query: 53  DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112
            G  + S  E+M        ET      +KD E   +      +    +  + K+ +   
Sbjct: 123 FGLEAGSKPELMAVMALADNETPIICNGFKDDEYIEMAMLAQKMGRKIIPVVEKYTELQL 182

Query: 113 KLHKKIGLRINPSV-------SYSKFILADPNRPFSRLGEKCKDKIESEI--------KN 157
            L     + + P++       S             S+ G    + + +            
Sbjct: 183 ILKYSAKVGVRPAIGLRVKLASRGSGRWKSSGGYRSKFGLSATEAMRALQELKDLGMSDC 242

Query: 158 VNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK------- 207
           +N L FH   +  +       +     +  +       ++++ +GGG+            
Sbjct: 243 LNLLHFHLGSQITNIRQIKGAVNEAVRVYVDLARAGAGLKFLDVGGGLGIDYDGSQTDFE 302

Query: 208 ----------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251
                        +    Q + +  E     I  E G AI    + L   VL +
Sbjct: 303 SSVNYTLQEYANDIIYHVQNVCDEVEVAHPTIITESGRAIAAYHSVLVFNVLGV 356


>gi|40645472|dbj|BAD06581.1| arginine decarboxylase [Nicotiana tabacum]
          Length = 733

 Score = 62.1 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 78/268 (29%), Gaps = 36/268 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++   +           A  + +  +KC     + + + ++  G  
Sbjct: 117 PLVVRFPDILKNRLESLQSVFDYAVQSQGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 176

Query: 56  ---TSSSLYEVMLGHEKFGGETH---AYNVAYKDCEID------AVLSNCDTIIFNTVSQ 103
               + S  E++L        +H        +KD E          L     I+     +
Sbjct: 177 FGLEAGSKPELLLAMSCLCKGSHEGLLVCNGFKDAEYISLALVARKLMLNTVIVLEQEEE 236

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+     IGLR      +S    +       + G      +          
Sbjct: 237 LDLVIDISKKMAVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQIVRVVKKLEESG 295

Query: 156 --KNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
               +  L FH   +  S             I  E       +++I  GGG+        
Sbjct: 296 MLDCLQLLHFHIGSQIPSTALLADGVGEAAQIYCELVRLGAGMKYIDCGGGLGIDYDGTK 355

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
             D    +    ++Y+    ++    + 
Sbjct: 356 SCDSDCSVGYGLQEYA-STVVQAVRFVC 382


>gi|158334821|ref|YP_001515993.1| arginine decarboxylase [Acaryochloris marina MBIC11017]
 gi|158305062|gb|ABW26679.1| arginine decarboxylase [Acaryochloris marina MBIC11017]
          Length = 674

 Score = 62.1 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/348 (12%), Positives = 104/348 (29%), Gaps = 58/348 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L + ++        A          + +  +KC     + + L ++     
Sbjct: 104 PLLIRFSDILADRIERLNACFAKAIARYSYPGRYRGVFPVKCNQQRHLVEDLVRFGQPHQ 163

Query: 53  DGTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLS------NCDTIIFNTVSQLN 105
            G  + S  E+++                YKD E            +   I+   + ++ 
Sbjct: 164 FGLEAGSKPELLIAIASLKTSGALLICNGYKDLEYVETAMLAQRLGHQAIIVIEQLEEVE 223

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK-------- 156
              + +++L  +  L +   +S         +     + G    + + +           
Sbjct: 224 LVIEASRRLQIQPILGVRAKLSAKGIGRWGTSAGDRAKFGLNIPEVVAAVEHLRAANLLN 283

Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTD------- 206
           ++  L FH   +  +       L+   +   E       ++++ +GGG+           
Sbjct: 284 SLQLLHFHIGSQISAISVIKDALREASQIYVELARLGANMKFLDVGGGLGVDYDGSKSNS 343

Query: 207 ---KDYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
              K+Y ++++   +    ++           +  E G AI ++ + L   VL  S+ + 
Sbjct: 344 AASKNYNMQNYANDVVAEVKEACAEADIPVPTLVSESGRAIASHQSVLIMNVLGSSDTLN 403

Query: 257 NLVIVDSSVEAHV----------PDYLLYQESATIYPNTGPYTAMVCG 294
                  + E  +           D   YQE+             + G
Sbjct: 404 LTPEPAQADEHLIIRNLWETYQTIDTENYQEAYHDALQFKEEAVSLFG 451


>gi|254785714|ref|YP_003073143.1| arginine decarboxylase [Teredinibacter turnerae T7901]
 gi|239918944|gb|ACR12004.2| arginine 2-monooxygenase [Teredinibacter turnerae T7901]
          Length = 639

 Score = 62.1 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/312 (11%), Positives = 85/312 (27%), Gaps = 48/312 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52
           P  +  +  L   +       + A          + +  +K      + + +     Q+ 
Sbjct: 66  PVLVRFEDLLEQQIGRLNNAFRKAIADTGYQAPYRGVFPIKVNQQCHVVEEICNVGAQFG 125

Query: 53  DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLN------ 105
            G  + S  E+++        + H     YKD E   +  +   + ++    +       
Sbjct: 126 HGLEAGSKPELIIALAHLESPDAHIVCNGYKDQEFIDLGLHACKMGYSCFFVVETPTELP 185

Query: 106 KFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEI--------K 156
              ++++ L+ K  + +     S         +   S  G      +E            
Sbjct: 186 IIIERSRALNIKPLIGVRVKLASMVGGHWTATSGDRSIFGLSITQLVEVVDTLKAEGMLD 245

Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------ 207
            +  L +H   +    +           +          + ++ LGGG+           
Sbjct: 246 CLQLLHYHLGSQIPNIRDIRTGVTEACQVYMNLVREGAAMGFLDLGGGLAVDYDGSNTNY 305

Query: 208 --------DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                   +    D    +             I  E G A+V  ++ L   VLD++    
Sbjct: 306 IHSRNYTLEEYCADIIDVIMSTLNPEQIAHPTIITESGRALVAYSSVLLFNVLDVASFQV 365

Query: 257 NLVIVDSSVEAH 268
             +      E H
Sbjct: 366 GQLPESIPREEH 377


>gi|158145207|gb|ABW21835.1| putative arginine decarboxylase [Solanum chilense]
          Length = 448

 Score = 62.1 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLVVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+     IGLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301


>gi|315127973|ref|YP_004069976.1| arginine decarboxylase [Pseudoalteromonas sp. SM9913]
 gi|315016487|gb|ADT69825.1| arginine decarboxylase [Pseudoalteromonas sp. SM9913]
          Length = 626

 Score = 62.1 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/308 (13%), Positives = 86/308 (27%), Gaps = 46/308 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMF-DTLN--QYMD 53
           P  +     L N +DT       A            +  +K      +    L     + 
Sbjct: 60  PVLVRFTDILKNRVDTLTNAFTQARTNREYNGKYTCVYPIKVNQQRSVVSKLLAHPSGLV 119

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
           G  + S  E+M                YKD E   +      +  +    + K  +    
Sbjct: 120 GLEAGSKPELMAILGVAKEPITIVCNGYKDSEFLRLACIGQAMGHSVKIVVEKLSELTTL 179

Query: 114 LHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKI--------ESEIKNV 158
           L +   L I P+        S  K    +      + G      +         S++  +
Sbjct: 180 LEEIDNLGIEPAIGIRIRLNSVGKGKWQNTGGEKGKFGLTAGQVLSAVEVLKQHSKLHLM 239

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207
             + FH   +  +       L+   + F     +   +  + +GGG+    +        
Sbjct: 240 QMVHFHIGSQIANIRDIHRALRECARHFAELTQYGVPLNTVDVGGGLGVDYEGSGSRSAC 299

Query: 208 ------DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
                 +   ++      +  +++      I  E G A+  +   L T V+D+ +   +L
Sbjct: 300 SMNYTVEEYARNVVNAFADVCDQHNLTHPAIITESGRALTAHHAVLITDVIDVEKAPNHL 359

Query: 259 VIVDSSVE 266
                   
Sbjct: 360 NPEPPLEN 367


>gi|327540610|gb|EGF27184.1| Arginine decarboxylase [Rhodopirellula baltica WH47]
          Length = 668

 Score = 62.1 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/285 (11%), Positives = 78/285 (27%), Gaps = 47/285 (16%)

Query: 14  LLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTL----NQYMDGTTSSSLY 61
           L + L       KN        +  + +  +K      +   +     +   G  + S  
Sbjct: 74  LRDRLRELDRCFKNAIHDHKYQSRYRCVFPIKVNQQREVVQQIVSEGARLGFGIEAGSKP 133

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLNKFKDKAQKLH 115
           E++                +KD E   +      +      +   VS+L+   D A+ + 
Sbjct: 134 ELVAAVAMGDANVPIVCNGFKDEEFIRLALLAQRLGRNVLPVVEKVSELDLILDVAKDIG 193

Query: 116 KKIGLRINPSVSYSK-FILADPNRPFSRLGEKCKDKI--------ESEIKNVNGLMFHNN 166
            +  + +   ++              S+ G    + +              +  L FH  
Sbjct: 194 VRPTIGMRVKLATRGSGRWQASGGYRSKFGLTVAELLAQLDRLIAMDMGDCLQLLHFHVG 253

Query: 167 CENKSFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDK---------------- 207
            +  +     +       I  +       + ++ +GGG+                     
Sbjct: 254 SQIGNIRQLKSAILEAARIYVDLVRRGAGMRYLDVGGGLGVDYDGSRSDSESSMNYTMQE 313

Query: 208 -DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251
               V    Q + + +     ++  E G A+  + + L    L +
Sbjct: 314 YANDVVYHTQTVCDEAGVPHPELISESGRAVAAHHSVLVMETLGV 358


>gi|297836704|ref|XP_002886234.1| hypothetical protein ARALYDRAFT_900320 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297332074|gb|EFH62493.1| hypothetical protein ARALYDRAFT_900320 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 702

 Score = 62.1 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/278 (12%), Positives = 81/278 (29%), Gaps = 36/278 (12%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +     L N L+                +  + +  +KC     + + + ++     
Sbjct: 95  PLIVRFPDVLKNRLECLQSAFDYAIQSQGYGSHYQGVYPVKCNQDRFIIEDIVEFGSSFR 154

Query: 54  -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
            G  + S  E++L          E       +KD E  ++            I+     +
Sbjct: 155 FGLEAGSKPEILLAMSCLCKGNPEAFLVCNGFKDSEYISLALFGRKLELNTVIVLEQEEE 214

Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D +QK++ +   GLR      +S    +       + G      +          
Sbjct: 215 LDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTIQIVRVVRKLSQVG 273

Query: 156 --KNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
             + +  L FH   +  S        A    +  E       ++ I +GGG+        
Sbjct: 274 MLECLQLLHFHIGSQIPSTALLSDGVAEAAQLYCELVRLGAHMKVIDIGGGLGIDYDGSK 333

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248
             +    +    E+Y+    +     +    +  +  +
Sbjct: 334 SGESDLSVAYSLEEYA-AAVVASVRFVCDQKSVKHPVI 370


>gi|158145229|gb|ABW21846.1| putative arginine decarboxylase [Solanum chilense]
 gi|158145237|gb|ABW21850.1| putative arginine decarboxylase [Solanum chilense]
          Length = 448

 Score = 62.1 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDLFVVEDIVKFGSGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+     IGLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301


>gi|32472684|ref|NP_865678.1| arginine decarboxylase [Rhodopirellula baltica SH 1]
 gi|48474355|sp|Q7UTS2|SPEA_RHOBA RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|32443921|emb|CAD73363.1| arginine decarboxylase [Rhodopirellula baltica SH 1]
          Length = 668

 Score = 62.1 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/285 (11%), Positives = 78/285 (27%), Gaps = 47/285 (16%)

Query: 14  LLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTL----NQYMDGTTSSSLY 61
           L + L       KN        +  + +  +K      +   +     +   G  + S  
Sbjct: 74  LRDRLRELDRCFKNAIHDHKYQSRYRCVFPIKVNQQREVVQQIVSEGARLGFGIEAGSKP 133

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLNKFKDKAQKLH 115
           E++                +KD E   +      +      +   VS+L+   D A+ + 
Sbjct: 134 ELVAAVAMGDANVPIVCNGFKDEEFIRLALLAQRLGRNVLPVVEKVSELDLILDVAKDIG 193

Query: 116 KKIGLRINPSVSYSK-FILADPNRPFSRLGEKCKDKI--------ESEIKNVNGLMFHNN 166
            +  + +   ++              S+ G    + +              +  L FH  
Sbjct: 194 VRPTIGMRVKLATRGSGRWQASGGYRSKFGLTVAELLAQLDRLIAMDMGDCLQLLHFHVG 253

Query: 167 CENKSFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDK---------------- 207
            +  +     +       I  +       + ++ +GGG+                     
Sbjct: 254 SQIGNIRQLKSAILEAARIYVDLVRRGAGMRYLDVGGGLGVDYDGSRSDSESSMNYTMQE 313

Query: 208 -DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251
               V    Q + + +     ++  E G A+  + + L    L +
Sbjct: 314 YANDVVYHTQTVCDEAGVPHPELISESGRAVAAHHSVLVMETLGV 358


>gi|260914641|ref|ZP_05921107.1| arginine 2-monooxygenase [Pasteurella dagmatis ATCC 43325]
 gi|260631240|gb|EEX49425.1| arginine 2-monooxygenase [Pasteurella dagmatis ATCC 43325]
          Length = 614

 Score = 62.1 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 79/265 (29%), Gaps = 32/265 (12%)

Query: 2   IKTPYYLIDKQKLLNNL----DTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM- 52
           + T  +    Q + + L          R+N G +    L+  +K      + ++L     
Sbjct: 42  LPT-LFCF-PQIIQHRLCSINQAFQQARENFGYEGNYFLVYPIKVNQHRRVIESLINSGQ 99

Query: 53  -DGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEIDAVLS-----NCDTIIFNTVSQL 104
             G  + S  E+M  L H          N       I   L      +   ++   +S++
Sbjct: 100 TLGLEAGSKAELMAVLAHAGVTQTVIVCNGYKDREYIRFALMGEKLGHKVYLVIEKLSEI 159

Query: 105 NKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ESEI 155
               ++A KL+ K  L +   ++         +     + G      +           +
Sbjct: 160 QLVLEEAAKLNVKPRLGVRARLASQGSGKWQSSGGEKSKFGLSASQVLSLVNMLKEHDCL 219

Query: 156 KNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVK 212
             +  L FH   +    +              E       I+   +GGG+    +    +
Sbjct: 220 DCLQLLHFHLGSQLGNIRDVATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGNRTQ 279

Query: 213 DFCQRLKEFSEKYSVQIYLEPGEAI 237
             C  +     +Y+  +    G+A 
Sbjct: 280 SDCS-VNYGLNEYADTVVWGIGQAC 303


>gi|317455968|gb|ADV29076.1| arginine decarboxylase [Solanum arcanum]
          Length = 448

 Score = 62.1 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSECLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+     IGLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTDLLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301


>gi|307824977|ref|ZP_07655199.1| arginine decarboxylase [Methylobacter tundripaludum SV96]
 gi|307734024|gb|EFO04879.1| arginine decarboxylase [Methylobacter tundripaludum SV96]
          Length = 608

 Score = 62.1 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/308 (13%), Positives = 85/308 (27%), Gaps = 45/308 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFD-TLNQYMDGT 55
           P  +     L + +       + A            +  +K      + +  L     G 
Sbjct: 61  PVLVRFTDILKDRVTQLSNAFQKACVNNDYQGNYTPVYPIKVNQQRKVVEGILAADNIGL 120

Query: 56  TSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKD 109
            + S  E+ L       +       YKD            +     ++     +L    +
Sbjct: 121 EAGSKPEL-LAIMALSNKGVVVCNGYKDRAYIRLALIGLKMGLNLYLVIEKPLELELIIE 179

Query: 110 KAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIKNVNG 160
           +A +L+ K  L +   +S         +     + G    + ++          +  +  
Sbjct: 180 EAARLNIKPQLGVRIRLSSISAGKWQNSGGEKSKFGLHAPEVLQLIERLKQAGLLDTLKL 239

Query: 161 LMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDK---------- 207
           + FH   +  +       LK       E       ++ +  GGG+               
Sbjct: 240 MHFHMGSQIANIHDIKIALKEAGQFYVELHRLGANVKIVDAGGGLGVDYDGSHSRRESSI 299

Query: 208 DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI 260
           +Y + ++ Q +                 I  E G A+  +   L T V DI     N   
Sbjct: 300 NYSLDEYAQNIVRSFADICAEKQVPQPDIITESGRALTAHHAVLITNVTDIESVYANHAE 359

Query: 261 VDSSVEAH 268
           + +  E H
Sbjct: 360 LQALPEPH 367


>gi|226227457|ref|YP_002761563.1| biosynthetic arginine decarboxylase [Gemmatimonas aurantiaca T-27]
 gi|226090648|dbj|BAH39093.1| biosynthetic arginine decarboxylase [Gemmatimonas aurantiaca T-27]
          Length = 652

 Score = 61.7 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/327 (12%), Positives = 80/327 (24%), Gaps = 48/327 (14%)

Query: 12  QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYMDGTTSSS 59
             L + ++T       A        G   +  +K      + + +      +  G    S
Sbjct: 81  DILRSRIETLSERFGAAIREFEYTGGYTTVYPIKVNQQRHVVEEIVRFGKTHGVGLECGS 140

Query: 60  LYEVMLGHE-KFGGETHAYNVAYKDCE------IDAVLSNCDTIIFNTVSQLNKFKDKAQ 112
             E+          E       YKD E      +   L +   I+   VS+L+   + A 
Sbjct: 141 KPELQAVLGLSHSTEHLIVCNGYKDHEFMRLALMGQKLGHTVFIVLEQVSELDVLLEVAD 200

Query: 113 KLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMF 163
           +L       +     S      A      S+ G    + I+             +  + F
Sbjct: 201 ELGVTPTCGVRIKLASEGAGRWAQSGGEKSKFGLSSAELIKLIDKLQAANRLDILKLIHF 260

Query: 164 HNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDK------------- 207
           H   +             +     E       I  + +GGG+                  
Sbjct: 261 HLGSQITDIRFIKSGLQEVARFYLELRAVGVDITHVDVGGGLGIDYDGTNSTNNASVNYT 320

Query: 208 ----DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDS 263
                  V          +E     I  E G A+  +   L   V+D+    +  +    
Sbjct: 321 LQEYANDVVYTIAEACREAELSMPHIISESGRALTAHHALLLIKVIDVESQAEQPIPALD 380

Query: 264 SVEAHVPDYLLYQESATIYPNTGPYTA 290
             +  +   +             P   
Sbjct: 381 DDDHSLLHEMYEDWRTLTERAARPRKV 407


>gi|166367422|ref|YP_001659695.1| arginine decarboxylase [Microcystis aeruginosa NIES-843]
 gi|166089795|dbj|BAG04503.1| arginine decarboxylase [Microcystis aeruginosa NIES-843]
          Length = 679

 Score = 61.7 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/346 (11%), Positives = 97/346 (28%), Gaps = 57/346 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVK-----LL---LALKCFAAWGMFDTLNQYM---- 52
           P  +     L + ++        A  +     +      +KC     + ++L ++     
Sbjct: 92  PLLIRFSDILEDRIERLNACFSRAIARYNYPNVYRGVYPIKCNQHRHIVESLVRFGKPYQ 151

Query: 53  DGTTSSSLYEVMLGHEKFGG---------ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQ 103
            G  + S  E+M+                +       YKD E          +    +  
Sbjct: 152 FGLEAGSKPELMIALATLEPALNGKNDKTQPLLICNGYKDKEYIETALLTTRLGHRPLIV 211

Query: 104 LNKFKDKAQKLHKKIGLRINPSVSYSK-------FILADPNRPFSRLGEKCKDKIESEI- 155
           + + ++    L     L I P +                     ++ G    + +     
Sbjct: 212 IEQLEELYLTLRVSRQLGIAPHLGVRAKLGTKGVGRWGCSTGDRAKFGLTVPEILTVVTE 271

Query: 156 -------KNVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFT 205
                    +  L +H   +  +       ++   +   E       + ++ +GGG+   
Sbjct: 272 LEQAGMLDCLQLLHYHIGSQISAISVIKDAIREASQIYVELAKLGANMTYLDVGGGLGVD 331

Query: 206 D----------KDYPVKDFCQRLKEFSEK-------YSVQIYLEPGEAIVTNTTTLNTTV 248
                      K+Y ++++   +    ++           +  E G AI ++ + L   +
Sbjct: 332 YDGSKTNFYASKNYNMQNYANDIVAEVKEACEDAQISPPILISESGRAIASHQSVLVFDI 391

Query: 249 LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCG 294
           L  SE  +N     +  E  +    L++    I            G
Sbjct: 392 LGSSEVPQNPPDPCNGKEHLIL-RNLWETYTGIDERNYQEAYHDAG 436


>gi|158145259|gb|ABW21861.1| putative arginine decarboxylase [Solanum chilense]
          Length = 448

 Score = 61.7 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------- 153
           L+   D ++K+  +   GLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMEVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244

Query: 154 EIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 245 MFDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301


>gi|320451384|ref|YP_004203480.1| arginine decarboxylase [Thermus scotoductus SA-01]
 gi|320151553|gb|ADW22931.1| arginine decarboxylase [Thermus scotoductus SA-01]
          Length = 630

 Score = 61.7 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/299 (12%), Positives = 81/299 (27%), Gaps = 48/299 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52
           P  L   Q L   +       + A        G + +  +K      + +T+ +      
Sbjct: 63  PLVLRFPQILEARVRELNEAFRRAMEKYGYHGGYRGVYPVKVNQRRLVLETVAKAGRPYH 122

Query: 53  DGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA 111
            G  + S  E+ L        E       +KD +   +      +  N V  L KF + +
Sbjct: 123 YGLEAGSKAELALILAQDLSPEALITTNGFKDDDFIRLALTGKKLSRNVVITLEKFAELS 182

Query: 112 QKLHKKIGLRINPSVSYSK-------FILADPNRPFSRLGEKCKDKIES--------EIK 156
           + +     L + P +                     ++ G    + I +         + 
Sbjct: 183 RVIRISKELGVRPKLGIRYKLKAKGAGQWEASGGENAKFGLTTPEIIRAVEILKEEGLLD 242

Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------ 207
            +  +  H   +    +              +       +++++LGGG+           
Sbjct: 243 ALVMIHAHIGSQVTDIRKIKAAVREAAQTYVQLRKLGAPLQYLNLGGGLAVDYDGSKTNF 302

Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI 255
                         +    + + E   +    +  E G A+      L   V+D+    
Sbjct: 303 YASANYTLPEYAEDLVYVTKEVVEAQGEPHPTLVTESGRAVTAYHEVLVLEVIDVITPP 361


>gi|16332143|ref|NP_442871.1| arginine decarboxylase [Synechocystis sp. PCC 6803]
 gi|15214309|sp|P74576|SPEA1_SYNY3 RecName: Full=Biosynthetic arginine decarboxylase 1; Short=ADC 1
 gi|1653772|dbj|BAA18683.1| arginine decarboxylase [Synechocystis sp. PCC 6803]
          Length = 695

 Score = 61.7 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/342 (12%), Positives = 102/342 (29%), Gaps = 57/342 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYM---- 52
           P  L     L + ++                   + +  +KC     + ++L +Y     
Sbjct: 101 PLLLRFSDILADRINRLNAAFARGIARYRYPNTYRGVYPIKCNQHRHIVESLVRYGTPYN 160

Query: 53  DGTTSSSLYEVMLGHEKFGG----------ETHAYNVAYKDCEIDAVL------SNCDTI 96
            G  + S  E+M+                 +       YKD E            +   I
Sbjct: 161 FGLEAGSKPELMIALAMLQPQENPEPDQQNQPLLICNGYKDREYIETALLARRLGHRPII 220

Query: 97  IFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI 155
           +   V+++    + +  L  K  L +   +S         +     + G    + + +  
Sbjct: 221 VVEQVAEVALAIEISSNLGIKPILGVRAKLSTQGMGRWGISTGDRAKFGLTIPEMLTAIE 280

Query: 156 K--------NVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHF 204
           +        ++  L FH   +  S       +    + F         + ++ +GGG+  
Sbjct: 281 QLRRADMLDSLQLLHFHIGSQISSISVIKEAMTEASQIFVQLAKLGANMRYLDVGGGLGV 340

Query: 205 TD----------KDYPVKDFCQRLKEFSEK-------YSVQIYLEPGEAIVTNTTTLNTT 247
                       K+Y ++++   +    +            +  E G AI ++ + L   
Sbjct: 341 DYDGSKTNFYASKNYNIQNYVNDVISAVQDACVAAEVPCPVLISESGRAIASHQSVLIFD 400

Query: 248 VLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT 289
           V+  ++    L  V     A + + +   E+ T+      Y 
Sbjct: 401 VVATNDINPPLPKVKGKDHAILRNLMETWETITVDNYQEAYH 442


>gi|302842606|ref|XP_002952846.1| hypothetical protein VOLCADRAFT_93499 [Volvox carteri f.
           nagariensis]
 gi|300261886|gb|EFJ46096.1| hypothetical protein VOLCADRAFT_93499 [Volvox carteri f.
           nagariensis]
          Length = 499

 Score = 61.7 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/152 (10%), Positives = 42/152 (27%), Gaps = 6/152 (3%)

Query: 23  YIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAY 81
                       A+K      + + +     G   +SL E+       F  +   ++   
Sbjct: 2   RAAFPHNTLHTFAVKANPVKRVLELMRDAGLGAEVASLGELRHALSCGFPPDRVVFDSPI 61

Query: 82  KDCEIDAVLSNCDTIIFNTVSQLN---KFKDKAQKLHKKIGLRINPSVSYSKFILADPNR 138
           K                 + +  N   +    + K + +   R+      +       ++
Sbjct: 62  KTAAELRFALEAGRTARRSGNPKNPQTQTATLSYKHNPETAPRVGEGRIAALSTAGRVSK 121

Query: 139 PFSRLGEKCKDKIES--EIKNVNGLMFHNNCE 168
             + L E   + + +  +   +N L  H   +
Sbjct: 122 FGTPLLECRSELLAAFEKHPWINALHVHVGSQ 153



 Score = 50.1 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 34/116 (29%), Gaps = 14/116 (12%)

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287
           Q+  E G  +V  +      V          V+V       +   +   E+  +      
Sbjct: 296 QLVTEFGRCLVAKSVFAVGRVEYSKRCGGRRVVVSGLGGDLLLRAVYLPETWPVRV---- 351

Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIA 343
               + GR         ++    P    D +   DV  Y ++  + +N    P + 
Sbjct: 352 ELYGIDGR--------RKYPPLPP--SCDWVVVPDVGAYCLSMYSRYNSRCSPAVW 397


>gi|254526034|ref|ZP_05138086.1| arginine decarboxylase [Prochlorococcus marinus str. MIT 9202]
 gi|221537458|gb|EEE39911.1| arginine decarboxylase [Prochlorococcus marinus str. MIT 9202]
          Length = 648

 Score = 61.7 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/316 (13%), Positives = 99/316 (31%), Gaps = 48/316 (15%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAG--------VKLLLALKCFAAWGMFDTLNQYMD 53
           I TP  +     L + ++        A          + +  +KC     + + + ++  
Sbjct: 66  INTPLIIRFNDILKDRINALHDAFLKAIKTYKYKNIYQGVFPVKCNQQKNVLEKIIEFGS 125

Query: 54  ----GTTSSSLYEVMLGHEKFGG-ETHAYNVAYKDCEIDAVLSNCD------TIIFNTVS 102
               G    S  E+++G        +      YKD +   + +          I+     
Sbjct: 126 PWNFGLEVGSKSELLIGLALLENQNSLLICNGYKDKKYIEIATLARKLGKNPIIVIEQKD 185

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKIE--------S 153
           ++ +  +  Q L+    + I   +S       +      S+ G    + +         +
Sbjct: 186 EVKRIIEAVQDLNASPLIGIRAKLSSKSSGRWSKSVGDNSKFGLSIPEIMSTIKELKEAN 245

Query: 154 EIKNVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDK--- 207
            I  +  L FH   +          L+   +   E       +++I +GGG+        
Sbjct: 246 LINEMRLLHFHIGSQISDIAVIKDALQEASQIYVELCKLGAPMKYIDVGGGLGIDFDGTK 305

Query: 208 -------DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISE 253
                  +Y ++++   +    +            I  E G AI+++ + L   VL  S 
Sbjct: 306 TSSNTSTNYSLQNYANDVIATIKDSCELNNIEHPTIISESGRAIISHCSVLIFNVLGTSH 365

Query: 254 NIKNLVIVDSSVEAHV 269
               L I D   ++ +
Sbjct: 366 VSSKLKIYDDKNQSLI 381


>gi|190576182|ref|YP_001974027.1| arginine decarboxylase [Stenotrophomonas maltophilia K279a]
 gi|190014104|emb|CAQ47743.1| putative biosynthetic arginine decarboxylase [Stenotrophomonas
           maltophilia K279a]
          Length = 629

 Score = 61.7 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 47/332 (14%), Positives = 97/332 (29%), Gaps = 46/332 (13%)

Query: 29  GVKLLLALKCFAAWGMFDTLNQY---MDGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCE 85
           G   +  +K     G+  TL  +     G  + S  E+M                YKD E
Sbjct: 92  GYTAVYPIKVNQTRGVAGTLASHHGEGFGLEAGSKPELMAVLALSRPGGLIVCNGYKDRE 151

Query: 86  IDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRP 139
              +            I+    S+L    ++++ L  K GL +   ++         +  
Sbjct: 152 YIRLALIGRKLGLQTFIVIEKPSELKLVLEESKALDVKPGLGVRMRLASLGAGKWQNSGG 211

Query: 140 FS-RLGEKCKDKIE--------SEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---G 187
              + G   +  ++             +N L FH   +  +    +  ++   + F    
Sbjct: 212 DKAKFGLSPRQLLDLWKSLRDTEYADCLNLLHFHMGSQISNVRDIANGMREATRYFVELS 271

Query: 188 HFITQIEWISLGGGIHFTDK----------DYPVKDFCQRLKEFSEK-------YSVQIY 230
               +I  + +GGG+    +          +Y +  +   + +              +I 
Sbjct: 272 RLGAKITHVDVGGGLGVDYEGTRSRSFCSINYGLHSYASNIVQPLANACEEFGLTPPRIV 331

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE----AHVPDYL-LYQESATIYPNT 285
            E G A+  +   L   V ++ E  +  V      E     H+ +          +    
Sbjct: 332 TECGRAMTAHHAVLIANVSEVEEAQEGRVPDQHDDEPAAIRHLREIHDELDVRPAVELFQ 391

Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDR 317
                   G   LA    G+    +  +I D 
Sbjct: 392 EAQHFHAEG---LASYALGQIDLPQRARIDDL 420


>gi|220936281|ref|YP_002515180.1| arginine decarboxylase [Thioalkalivibrio sp. HL-EbGR7]
 gi|219997591|gb|ACL74193.1| arginine decarboxylase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 627

 Score = 61.7 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/299 (13%), Positives = 79/299 (26%), Gaps = 46/299 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMF-DTLNQYMD-- 53
           P  +  +  L + +        NA            +  +K      +    L    D  
Sbjct: 62  PVLIRFQDILTDRVHRLRQAFDNARAETGFTGNYTAVYPIKVNQQRSVVEQILEAGGDRV 121

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVL------SNCDTIIFNTVSQLNKF 107
           G  + S  E+M                YKD E   +        +   I+    S+L+  
Sbjct: 122 GLEAGSKPELMAVLALSRPGGVIVCNGYKDREYLRLALIGRLLGHRVYIVIEKPSELDGV 181

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNR-----------PFSRLGEKCKDKIESEIK 156
            + A+ L  +  L +   ++                         +L E+ +D    +  
Sbjct: 182 MEAARDLGVRPMLGMRVRLASIGKGKWQNTGGEKAKFGLSASQSLKLLERLRDADMLDCM 241

Query: 157 NVNGLMFHNNC-ENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK-------- 207
            +      +     +              E       I+ +  GGG+    +        
Sbjct: 242 QLLHFHMGSQIANIRDIQAGMGEAGRFYAELRRLGADIQVVDAGGGLGVDYEGSRSRNDC 301

Query: 208 ------DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKN 257
                      +  + +     +Y     QI+ E G A+  +   L T V+D     + 
Sbjct: 302 SMNYSLQEYANNIVRGIMNTCREYDLPHPQIFTESGRALTAHHAVLVTNVIDTERAPEQ 360


>gi|222524483|ref|YP_002568954.1| Orn/DAP/Arg decarboxylase 2 [Chloroflexus sp. Y-400-fl]
 gi|222448362|gb|ACM52628.1| Orn/DAP/Arg decarboxylase 2 [Chloroflexus sp. Y-400-fl]
          Length = 503

 Score = 61.7 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/337 (11%), Positives = 83/337 (24%), Gaps = 38/337 (11%)

Query: 28  AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH-----EKFGGETHAYNVAYK 82
           A      A K   A     T         +S+  ++++ H          +        K
Sbjct: 85  APFHYAYATKANFAAEAVQTALAAGAHYETSATADLIIAHGLWRQGILPPDRLICCNGSK 144

Query: 83  DCEIDAVLS-----NCDTIIFNTVSQLNKFKDKAQKLHKKIGLR-INPSVSYSKFILADP 136
           +      +       C+T+I                   + G+R         +    D 
Sbjct: 145 EPAYRNAIRQLRLDGCETVIPVLDDLSELHDLITTPAPLQFGVRERAAGNRDGRHPGNDR 204

Query: 137 NRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN---IEKEFGHFITQI 193
                   E+  D I +    +         + +    F   L+            +  +
Sbjct: 205 FGLTMAEIEQAADLIATTEHRLVLYHAMIGSQIEDEGHFLTTLRASIENYCRLRRRVPTL 264

Query: 194 EWISLGGGIH----FTDKDYPVKDFCQRLKEFSEKYSVQI-------YLEPGEAIVTNTT 242
            + + GGG+         ++  + F  RL         +          E G   V   +
Sbjct: 265 RYFNFGGGVPTAGYQLTFNFDYQRFLARLMATVRDLCAEYDVPVPELIGEFGRYTVATHS 324

Query: 243 TLNTTVLDISENIKNLVIVDSSVEAHV---PDYLLYQESATIY-----PNTGPYTAMVCG 294
                V  +     +         + +   PD L       +       +       + G
Sbjct: 325 AYLVEVGAVKAGQPDQPDWYLINGSLMVMLPDTLFVSGQEFVILPLSDWHRPVRPVRLAG 384

Query: 295 -RSCLAGDIFGE----FHFEKPVKIGDRISFEDVAGY 326
            R+C + DI+        +      G  ++   +  Y
Sbjct: 385 RRTCDSDDIYPRPEQPPLWLPETDGGLVLAIFGIGAY 421


>gi|159030382|emb|CAO91278.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 679

 Score = 61.7 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/346 (11%), Positives = 97/346 (28%), Gaps = 57/346 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVK-----LL---LALKCFAAWGMFDTLNQYM---- 52
           P  +     L + ++        A  +     +      +KC     + ++L ++     
Sbjct: 92  PLLIRFSDILEDRIERLNACFSRAIARYNYPNVYRGVYPIKCNQHRHIVESLVRFGKPYQ 151

Query: 53  DGTTSSSLYEVMLGHEKFGG---------ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQ 103
            G  + S  E+M+                +       YKD E          +    +  
Sbjct: 152 FGLEAGSKPELMIALATLEPALSGKNDKTQPLLICNGYKDKEYLETALLTTRLGHRPLIV 211

Query: 104 LNKFKDKAQKLHKKIGLRINPSVSYSK-------FILADPNRPFSRLGEKCKDKIESEI- 155
           + + ++    L     L I P +                     ++ G    + +     
Sbjct: 212 IEQLEELYLTLRVSRQLGIAPHLGVRAKLGTKGVGRWGCSTGDRAKFGLTVPEILTVVTE 271

Query: 156 -------KNVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFT 205
                    +  L +H   +  +       ++   +   E       + ++ +GGG+   
Sbjct: 272 LEQAGMLDCLQLLHYHIGSQISAISVIKDAIREASQIYVELAKLGANMTYLDVGGGLGVD 331

Query: 206 D----------KDYPVKDFCQRLKEFSEK-------YSVQIYLEPGEAIVTNTTTLNTTV 248
                      K+Y ++++   +    ++           +  E G AI ++ + L   +
Sbjct: 332 YDGSKTNFYASKNYNMQNYANDIVAEVKEACEDAQISPPILISESGRAIASHQSVLVFDI 391

Query: 249 LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCG 294
           L  SE  +N     +  E  +    L++    I            G
Sbjct: 392 LGSSEVPQNPPDPCNGKEHLIL-RNLWETYTGIDERNYQEAYHDAG 436


>gi|163846678|ref|YP_001634722.1| Orn/DAP/Arg decarboxylase 2 [Chloroflexus aurantiacus J-10-fl]
 gi|163667967|gb|ABY34333.1| Orn/DAP/Arg decarboxylase 2 [Chloroflexus aurantiacus J-10-fl]
          Length = 500

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/337 (11%), Positives = 83/337 (24%), Gaps = 38/337 (11%)

Query: 28  AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH-----EKFGGETHAYNVAYK 82
           A      A K   A     T         +S+  ++++ H          +        K
Sbjct: 82  APFHYAYATKANFAAEAVQTALAAGAHYETSATADLIIAHGLWRQGILPPDRLICCNGSK 141

Query: 83  DCEIDAVLS-----NCDTIIFNTVSQLNKFKDKAQKLHKKIGLR-INPSVSYSKFILADP 136
           +      +       C+T+I                   + G+R         +    D 
Sbjct: 142 EPAYRNAIRQLRLDGCETVIPVLDDLSELHDLITTPAPLQFGVRERAAGNRDGRHPGNDR 201

Query: 137 NRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN---IEKEFGHFITQI 193
                   E+  D I +    +         + +    F   L+            +  +
Sbjct: 202 FGLTMAEIEQAADLIATTEHRLVLYHAMIGSQIEDEGHFLTTLRASIENYCRLRRRVPTL 261

Query: 194 EWISLGGGIH----FTDKDYPVKDFCQRLKEFSEKYSVQI-------YLEPGEAIVTNTT 242
            + + GGG+         ++  + F  RL         +          E G   V   +
Sbjct: 262 RYFNFGGGVPTAGYQLTFNFDYQRFLARLMATVRDLCAEYDVPVPELIGEFGRYTVATHS 321

Query: 243 TLNTTVLDISENIKNLVIVDSSVEAHV---PDYLLYQESATIY-----PNTGPYTAMVCG 294
                V  +     +         + +   PD L       +       +       + G
Sbjct: 322 AYLVEVGAVKAGQPDQPDWYLINGSLMVMLPDTLFVSGQEFVILPLSDWHRPVRPVRLAG 381

Query: 295 -RSCLAGDIFGE----FHFEKPVKIGDRISFEDVAGY 326
            R+C + DI+        +      G  ++   +  Y
Sbjct: 382 RRTCDSDDIYPRPEQPPLWLPETDGGLVLAIFGIGAY 418


>gi|330891073|gb|EGH23734.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. mori str.
           301020]
          Length = 122

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 30/121 (24%), Gaps = 9/121 (7%)

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPNTGPYT-------AMV 292
                  VLD   +     +V                +   I+    P T         V
Sbjct: 1   CGYYAIEVLDSKTSHGEHFLVCRGGTHQFRLPVAQGHDHPVIHVPCAPATGASEEQAYTV 60

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIAVKNVDGTI 351
            G+ C   D+       K V IGD +       Y  N  +  F     P          +
Sbjct: 61  VGQLCTPKDVLSRRQPLKGVNIGDLLVLPLAGAYGYNISHVDFLCHPRPVQHFVRNGERV 120

Query: 352 K 352
           +
Sbjct: 121 R 121


>gi|254442154|ref|ZP_05055630.1| arginine decarboxylase [Verrucomicrobiae bacterium DG1235]
 gi|198256462|gb|EDY80770.1| arginine decarboxylase [Verrucomicrobiae bacterium DG1235]
          Length = 656

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/295 (10%), Positives = 84/295 (28%), Gaps = 48/295 (16%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD 53
           IK P  +  +  L + ++        +          + +  +K      + + +    +
Sbjct: 61  IKAPMVIRFQDLLRHRVERLNKAFAESIKEEEYPANYRGVFPIKVNQLREVIEEIQDAGE 120

Query: 54  ----GTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD------TIIFNTVS 102
               G  + S  E+++         +      YKD +   +  N         I+   +S
Sbjct: 121 NHSYGLEAGSKPELLIAMAMHQNSNSLLVCNGYKDEDYIRLALNYRKIGKKIIIVAEQLS 180

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILA-DPNRPFSRLGEKCKDKIESEIK----- 156
           ++    + +++L     + +   +               ++ G    + +E+        
Sbjct: 181 EVELIIEMSRELEVDPLVGLRAKLGTRGEGKWAMSTGDNAKFGLSAMEMLEAARMLEKAE 240

Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207
              ++  L FH   +     +             +       + ++ +GGG+        
Sbjct: 241 LSGSLRLLHFHIGSQVPNIITLKTAVVEATRYYCQLQKMGFPMGFLDVGGGLAIDYDGSR 300

Query: 208 --------------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248
                            V    +++    +     +  E G AIV   + L T V
Sbjct: 301 SNYESSTNYTLEEYARDVVYNVKQICVKMKVPCPDLITESGRAIVAPHSVLITEV 355


>gi|304380083|ref|ZP_07362805.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp.
          aureus ATCC BAA-39]
 gi|304341349|gb|EFM07266.1| pyridoxal-dependent decarboxylase [Staphylococcus aureus subsp.
          aureus ATCC BAA-39]
          Length = 82

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 29/61 (47%), Gaps = 1/61 (1%)

Query: 7  YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66
          Y+ D   L ++L         +  ++  A+K  +   + DT++QY++G   +S  E+  G
Sbjct: 21 YIYDLVGLEHHLQHITSSLP-SNCQMYYAMKANSERTILDTISQYVEGFEVASQGEIAKG 79

Query: 67 H 67
           
Sbjct: 80 L 80


>gi|325955691|ref|YP_004239351.1| Orn/DAP/Arg decarboxylase 2, N-terminal protein [Weeksella virosa
           DSM 16922]
 gi|323438309|gb|ADX68773.1| Orn/DAP/Arg decarboxylase 2, N-terminal protein [Weeksella virosa
           DSM 16922]
          Length = 464

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 62/422 (14%), Positives = 121/422 (28%), Gaps = 64/422 (15%)

Query: 3   KTPY-YLIDKQKLLNNLDTALYIRKNAGVKL--------LLALKCFAAWGMFDTLNQYMD 53
            TP  +     K+  N+  A     +A  KL            K      +     +   
Sbjct: 42  GTPLKFTY-LPKISQNIQRAKSWFNDARKKLNYQGTYNYCYCTKSSHFRHIIKEALKNDI 100

Query: 54  GTTSSSLY-----EVMLGHEKFGGETHAYNVAYKDCEIDAV------LSNCDTIIFNTVS 102
              +SS Y     E +L       + +     +K  E            +  TI      
Sbjct: 101 HIETSSAYDINIVESLLNEGLMNHDQYVICNGFKREEYVENIARLINNGHRKTITVIDNY 160

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD--KIESEIKNVNG 160
           +  +    A +   +IG+RI                   +      +     +E   V  
Sbjct: 161 EEVELFSDAIEGDFEIGIRIASEEEPKFEFYTSRLGIGYKDIVPFYNNMVKPNERIKVKM 220

Query: 161 LMFHNNCENK---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---DYPVKDF 214
           L F  N   K    +         +         +++ +++GGG    +    +Y     
Sbjct: 221 LHFFINTGIKDNSYYWNELVKCLRVYVNLKKVCPELDSLNIGGGFPIKNSLTFEYDYAYM 280

Query: 215 CQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSV 265
            + +    +K+          I+ E G   V  +  +   VL      + +   ++DSS 
Sbjct: 281 AEEILGQIKKFCDEEGIPVPNIFTEFGSFTVGESGGMIYKVLYQKKQNDKEYWDMIDSSF 340

Query: 266 EAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGD-----------IFGEFHFEK 310
              +PD     +                 ++ G +C + D              ++   K
Sbjct: 341 MTTLPDAWAISKRFVMLPLNRWYDTYERVLLGGLTCDSDDYYNSEQHVNAIYLPKYDSAK 400

Query: 311 PVKIGDRISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDGTIKAI-REFSYNDYYN 364
           P+ IG    F +   Y  N  + F+G     I  P   + + +  ++   +E  Y     
Sbjct: 401 PLYIG----FFNTGAYQDNI-SGFDGVHHCLIPQPKYILIDENYQVEVFYQEQDYQSVLK 455

Query: 365 NL 366
            L
Sbjct: 456 KL 457


>gi|254441493|ref|ZP_05054986.1| hypothetical protein OA307_908 [Octadecabacter antarcticus 307]
 gi|198251571|gb|EDY75886.1| hypothetical protein OA307_908 [Octadecabacter antarcticus 307]
          Length = 93

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 20/59 (33%), Gaps = 2/59 (3%)

Query: 8  LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG 66
          ++D  +++            A   +  A+K   A      L        ++S  E+ LG
Sbjct: 8  VMDLNRVVQQYHALKAGLGAAD--IHYAVKANPAPETIARLVDLGSHFDAASRGEIELG 64


>gi|312383524|gb|EFR28580.1| hypothetical protein AND_03314 [Anopheles darlingi]
          Length = 1312

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 18/43 (41%)

Query: 304 GEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKN 346
            +       +IGD I F+++  Y +     FNG    T+ V  
Sbjct: 3   CQDVDFPEHQIGDYIVFDNLGAYGMVLATNFNGFPKATVQVYR 45


>gi|158145245|gb|ABW21854.1| putative arginine decarboxylase [Solanum chilense]
          Length = 448

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+  +   GLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMEVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301


>gi|158145231|gb|ABW21847.1| putative arginine decarboxylase [Solanum chilense]
          Length = 448

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+  +   GLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMEVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301


>gi|158145225|gb|ABW21844.1| putative arginine decarboxylase [Solanum chilense]
          Length = 448

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+  +   GLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMEVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301


>gi|158145199|gb|ABW21831.1| putative arginine decarboxylase [Solanum chilense]
 gi|158145203|gb|ABW21833.1| putative arginine decarboxylase [Solanum chilense]
          Length = 448

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+     IGLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVARKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301


>gi|92112677|ref|YP_572605.1| arginine decarboxylase [Chromohalobacter salexigens DSM 3043]
 gi|91795767|gb|ABE57906.1| arginine decarboxylase [Chromohalobacter salexigens DSM 3043]
          Length = 633

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/319 (9%), Positives = 86/319 (26%), Gaps = 50/319 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL-----NQY 51
           P  +     L + ++       +A        G   +  +K      + + +       +
Sbjct: 61  PVLVRFTDILHDRVERLCGAFDSAMHDEAYHGGYTAVYPIKVNQQRRVVEEILATQARGH 120

Query: 52  M-DGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCE-----IDAVLSNCDTIIFNTVSQ 103
              G  + S  E++  L     G      N            +   L +   ++    S+
Sbjct: 121 GRVGLEAGSKPELLAVLALSGDGPSLIVCNGYKDREYVRLALMGEKLGHRVYLVVEKHSE 180

Query: 104 LNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK------ 156
           L    ++A++L     + +   +S               + G      ++   +      
Sbjct: 181 LTLILEEARRLDVTPRIGLRARLSSVGKGKWQNTGGEKSKFGLTASQILDVVERLDAAGA 240

Query: 157 --NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---- 207
             ++  + FH   +    +             +        ++ + +GGG+    +    
Sbjct: 241 LASLQLVHFHLGSQIANIRDIQRGLRECARFYQSLRALGAPVDTVDVGGGLGVDYEGTRS 300

Query: 208 ------DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISEN 254
                 +Y + ++   +     +           +  E G A+  +   L T V+     
Sbjct: 301 RSFCSINYSMHEYASNVVWAFRQICDAENLPHPHLISESGRALTAHHAVLITNVIGEERL 360

Query: 255 IKNLVIVDSSVEAHVPDYL 273
                      +A + +  
Sbjct: 361 SDTPPERRLEGDAELDELW 379


>gi|61967684|gb|AAX56864.1| putative arginine decarboxylase [Solanum chilense]
 gi|61967688|gb|AAX56866.1| putative arginine decarboxylase [Solanum chilense]
 gi|61967692|gb|AAX56868.1| putative arginine decarboxylase [Solanum chilense]
 gi|61967696|gb|AAX56870.1| putative arginine decarboxylase [Solanum chilense]
 gi|61967698|gb|AAX56871.1| putative arginine decarboxylase [Solanum chilense]
 gi|158145195|gb|ABW21829.1| putative arginine decarboxylase [Solanum chilense]
 gi|158145197|gb|ABW21830.1| putative arginine decarboxylase [Solanum chilense]
 gi|158145201|gb|ABW21832.1| putative arginine decarboxylase [Solanum chilense]
 gi|158145205|gb|ABW21834.1| putative arginine decarboxylase [Solanum chilense]
 gi|158145213|gb|ABW21838.1| putative arginine decarboxylase [Solanum chilense]
 gi|158145217|gb|ABW21840.1| putative arginine decarboxylase [Solanum chilense]
 gi|158145223|gb|ABW21843.1| putative arginine decarboxylase [Solanum chilense]
 gi|158145235|gb|ABW21849.1| putative arginine decarboxylase [Solanum chilense]
 gi|158145239|gb|ABW21851.1| putative arginine decarboxylase [Solanum chilense]
 gi|158145249|gb|ABW21856.1| putative arginine decarboxylase [Solanum chilense]
 gi|158145255|gb|ABW21859.1| putative arginine decarboxylase [Solanum chilense]
          Length = 448

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+  +   GLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMEVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301


>gi|317455852|gb|ADV29018.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455862|gb|ADV29023.1| arginine decarboxylase [Solanum habrochaites]
          Length = 448

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDVEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+     IGLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301


>gi|3915016|sp|Q96412|SPE1_DIACA RecName: Full=Arginine decarboxylase; Short=ADC; Short=ARGDC
 gi|1575499|gb|AAB67887.1| arginine decarboxylase [Dianthus caryophyllus]
          Length = 725

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/236 (13%), Positives = 70/236 (29%), Gaps = 33/236 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L + L++               +  + +  +KC     + + + ++  G  
Sbjct: 116 PVIIRFPDVLKHRLESLQSAFDFAVRTHGYGSHYQGVYPVKCNQDRYIVEDIVEFGSGFR 175

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL--NKF 107
               + S  E+++      K   ++      +KD E  ++      +  NTV  +   + 
Sbjct: 176 FGLEAGSKPELLMAMSSLCKGSPDSLLVCNGFKDAEYISLAIIGRKLGLNTVIVIEQEEE 235

Query: 108 KDKAQKLHKKIGLRINPSVSY-----SKFILADPNRPFSRLGEKCKDKIESEI------- 155
            D A +L +K+G+R    V               +    + G      +           
Sbjct: 236 VDMAIELSRKMGIRPVVGVRAKLRTKHSGHFGSTSGEKGKFGLTTTQILRVVRKLENFGM 295

Query: 156 -KNVNGLMFHNNCEN---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207
              +  L FH   +           A    +  E       +  I +GGG+     
Sbjct: 296 LDCLQLLHFHIGSQIPTTTLLSDGVAEASQVYCELTRLGAHMRVIDIGGGLGIDYD 351


>gi|119471405|ref|ZP_01613877.1| arginine decarboxylase [Alteromonadales bacterium TW-7]
 gi|119445681|gb|EAW26965.1| arginine decarboxylase [Alteromonadales bacterium TW-7]
          Length = 515

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/308 (13%), Positives = 85/308 (27%), Gaps = 46/308 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMF-DTLN--QYMD 53
           P  +     L N +DT       A            +  +K      +    L     + 
Sbjct: 60  PVLVRFTDILKNRVDTLTNAFTKARSNREYNGKYTCVYPIKVNQQRSVVSKLLAHPSGLV 119

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
           G  + S  E+M                YKD E   +      +  +    + K  +    
Sbjct: 120 GLEAGSKPELMAILGVAKEPITIVCNGYKDSEFLRLACIGQAMGHSVKIVVEKLSELTTL 179

Query: 114 LHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNV 158
           L +   L I P+        S  K    +      + G      + +            +
Sbjct: 180 LEEIDNLGIEPAIGIRIRLNSVGKGKWQNTGGEKGKFGLTAGQVLSAVEVLKKHNKLHLM 239

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207
             + FH   +  +       L+   + F         +  + +GGG+    +        
Sbjct: 240 QMVHFHIGSQIANIRDIHRALRECARHFAELTQLGVPLNTVDVGGGLGVDYEGSGSRSAC 299

Query: 208 --DYPVKDFC-------QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
             +Y V+++          + +  +     I  E G A+  +   L T V+D+ +   +L
Sbjct: 300 SMNYTVEEYARNVVNAFAEVCDQHDLTHPAIITESGRALTAHHAVLITDVIDVEKAPNHL 359

Query: 259 VIVDSSVE 266
                   
Sbjct: 360 NPEPPLEN 367


>gi|224613246|gb|ACN60202.1| Antizyme inhibitor 1 [Salmo salar]
          Length = 299

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/264 (12%), Positives = 78/264 (29%), Gaps = 29/264 (10%)

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
            L++    S     +        +      +  + +   V G+ FH          +S  
Sbjct: 2   LLQVATEASSEGDEMGMAFGSKLKDCRHLLESAKEQGLQVVGVRFHIPSSCDDPQAYSHA 61

Query: 179 LKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFC--QRLKEFSEKYSVQIYL-E 232
           + +    F         +  + +GGG + ++      +      L  +    S    + E
Sbjct: 62  VSDARCVFDMGEDIGFSMTLLDIGGGFNGSETQLKQINSAVRPLLDLYFPASSGVSIMAE 121

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH--------VPDYLLYQESATIYPN 284
           PG   V+++ TL   ++      ++L         +        + D +    ++ +  N
Sbjct: 122 PGSYYVSSSFTLAVNIIAKEVGARDLHGNHDEPSPNDEPEFLYYMNDGVYGSFTSKLADN 181

Query: 285 TGPYTA--------------MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
             P  A               + G S    D   +      + +GD + F +   Y++  
Sbjct: 182 VIPAPALPKSGVSEDPVFASSLWGPSGDELDQVVDQCLLPELSVGDWLIFNNAGAYSLGP 241

Query: 331 KNWFNGINMPTIAV-KNVDGTIKA 353
            + F     P +    +     + 
Sbjct: 242 PSTFTESPRPPVYYTISTGDWFEM 265


>gi|317455890|gb|ADV29037.1| arginine decarboxylase [Solanum habrochaites]
          Length = 448

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 69/237 (29%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+     IGLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVWKLKESG 244

Query: 156 --KNVNGLMFHNNCEN---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207
               +  L FH   +    +           +  E       + +I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTQLLADGVGEAAQVYSELVRLGAGMNFIDIGGGLGIDYD 301


>gi|77164082|ref|YP_342607.1| arginine decarboxylase [Nitrosococcus oceani ATCC 19707]
 gi|254435104|ref|ZP_05048611.1| arginine decarboxylase [Nitrosococcus oceani AFC27]
 gi|76882396|gb|ABA57077.1| arginine decarboxylase [Nitrosococcus oceani ATCC 19707]
 gi|207088215|gb|EDZ65487.1| arginine decarboxylase [Nitrosococcus oceani AFC27]
          Length = 629

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/297 (11%), Positives = 71/297 (23%), Gaps = 46/297 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL---NQYMD 53
           P  +     L +   +       A            +  +K      +   +   +    
Sbjct: 62  PVLVRFSGILHHRAKSLRTAFTKAMTATHYQGFFSAVYPIKVNQQRQVIQEILAADSEHL 121

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCD------TIIFNTVSQLNKF 107
           G  + S  E++                YKD E   +            ++    S+L   
Sbjct: 122 GLEAGSKPELLAVMALSRPGALVICNGYKDREYIRLALMGRQLGLRIYLVVEKPSELEHI 181

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
             +AQ L  +  L +   ++               + G   +  +              +
Sbjct: 182 IHQAQALKVEPLLGVRVRLASIGKGKWQNTGGEKGKFGLSAEQVLMMIQRLRQIGMLHCL 241

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK-------- 207
             L FH   +                           +  + +GGG+             
Sbjct: 242 TLLHFHMGSQLPNIADIQRGIREAGRYYATLRELGVPLRSVDVGGGLGVDYDGTHTRGLC 301

Query: 208 ------DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENI 255
                           L E  E +     +I  E G A+V +   L + ++DI    
Sbjct: 302 STNYTLPEYAHKIVHGLWEICEAHQLPHPEIITEAGRAMVAHHAILISNIIDIQPAP 358


>gi|84468436|dbj|BAE71301.1| putative arginine decarboxylase [Trifolium pratense]
          Length = 729

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/236 (11%), Positives = 65/236 (27%), Gaps = 33/236 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               +  + +  +KC     + + + ++  G  
Sbjct: 118 PLVVRFPDVLKNRLESIQGAFDGAIQLQGYESHYQGVYPVKCNQDRFVVEDIVEFGSGFR 177

Query: 56  ---TSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L          E       +KD E  ++            I+     +
Sbjct: 178 FGLEAGSKPELLLAMSCLCKGNREAFLICNGFKDSEYISLALVARKLALNTVIVLEQEEE 237

Query: 104 LNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SE 154
           L+   + + KL  +  + +   +                + G      +           
Sbjct: 238 LDMVVEISNKLCIRPVIGVRAKLRTKHSGHFGSTSGDKGKFGLTTIQILRVVKKLEQLDM 297

Query: 155 IKNVNGLMFHNNCENKSFL---CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207
           +  +  L FH   +  +             I  E      Q+  + +GGG+     
Sbjct: 298 LDCLQLLHFHIGSQIPTTELLADGVGEAAQIYCELLRLGAQMRVLDIGGGLGIDYD 353


>gi|84468336|dbj|BAE71251.1| putative arginine decarboxylase [Trifolium pratense]
          Length = 729

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/236 (11%), Positives = 65/236 (27%), Gaps = 33/236 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               +  + +  +KC     + + + ++  G  
Sbjct: 118 PLVVRFPDVLKNRLESIQGAFDGAIQLQGYESHYQGVYPVKCNQDRFVVEDIVEFGSGFR 177

Query: 56  ---TSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L          E       +KD E  ++            I+     +
Sbjct: 178 FGLEAGSKPELLLAMSCLCKGNREAFLICNGFKDSEYISLALVARKLALNTVIVLEQEEE 237

Query: 104 LNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SE 154
           L+   + + KL  +  + +   +                + G      +           
Sbjct: 238 LDMVVEISNKLCIRPVIGVRAKLRTKHSGHFGSTSGDKGKFGLTTIQILRVVKKLEQLDM 297

Query: 155 IKNVNGLMFHNNCENKSFL---CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207
           +  +  L FH   +  +             I  E      Q+  + +GGG+     
Sbjct: 298 LDCLQLLHFHIGSQIPTTELLADGVGEAAQIYCELLRLGAQMRVLDIGGGLGIDYD 353


>gi|317456006|gb|ADV29095.1| arginine decarboxylase [Solanum arcanum]
          Length = 448

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+     IGLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301


>gi|317455998|gb|ADV29091.1| arginine decarboxylase [Solanum arcanum]
          Length = 448

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+     IGLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301


>gi|317455990|gb|ADV29087.1| arginine decarboxylase [Solanum arcanum]
 gi|317455994|gb|ADV29089.1| arginine decarboxylase [Solanum arcanum]
          Length = 448

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+     IGLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301


>gi|317455930|gb|ADV29057.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455932|gb|ADV29058.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455934|gb|ADV29059.1| arginine decarboxylase [Solanum habrochaites]
          Length = 448

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+     IGLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301


>gi|317455900|gb|ADV29042.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455902|gb|ADV29043.1| arginine decarboxylase [Solanum habrochaites]
          Length = 448

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+     IGLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301


>gi|317455898|gb|ADV29041.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455910|gb|ADV29047.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455914|gb|ADV29049.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455926|gb|ADV29055.1| arginine decarboxylase [Solanum habrochaites]
          Length = 448

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+     IGLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301


>gi|317455880|gb|ADV29032.1| arginine decarboxylase [Solanum habrochaites]
          Length = 448

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+     IGLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301


>gi|158145227|gb|ABW21845.1| putative arginine decarboxylase [Solanum chilense]
          Length = 448

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSERYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+     IGLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301


>gi|158145209|gb|ABW21836.1| putative arginine decarboxylase [Solanum chilense]
 gi|158145215|gb|ABW21839.1| putative arginine decarboxylase [Solanum chilense]
          Length = 448

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+     IGLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301


>gi|158145189|gb|ABW21826.1| putative arginine decarboxylase [Solanum peruvianum]
          Length = 448

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+     IGLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301


>gi|158145177|gb|ABW21820.1| putative arginine decarboxylase [Solanum peruvianum]
          Length = 448

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+     IGLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301


>gi|158145173|gb|ABW21818.1| putative arginine decarboxylase [Solanum peruvianum]
          Length = 448

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+     IGLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301


>gi|158145127|gb|ABW21795.1| putative arginine decarboxylase [Solanum peruvianum]
 gi|158145129|gb|ABW21796.1| putative arginine decarboxylase [Solanum peruvianum]
 gi|158145131|gb|ABW21797.1| putative arginine decarboxylase [Solanum peruvianum]
 gi|158145133|gb|ABW21798.1| putative arginine decarboxylase [Solanum peruvianum]
 gi|158145135|gb|ABW21799.1| putative arginine decarboxylase [Solanum peruvianum]
 gi|158145139|gb|ABW21801.1| putative arginine decarboxylase [Solanum peruvianum]
 gi|158145141|gb|ABW21802.1| putative arginine decarboxylase [Solanum peruvianum]
 gi|158145143|gb|ABW21803.1| putative arginine decarboxylase [Solanum peruvianum]
 gi|158145145|gb|ABW21804.1| putative arginine decarboxylase [Solanum peruvianum]
 gi|158145147|gb|ABW21805.1| putative arginine decarboxylase [Solanum peruvianum]
 gi|158145149|gb|ABW21806.1| putative arginine decarboxylase [Solanum peruvianum]
 gi|158145151|gb|ABW21807.1| putative arginine decarboxylase [Solanum peruvianum]
 gi|158145159|gb|ABW21811.1| putative arginine decarboxylase [Solanum peruvianum]
 gi|158145163|gb|ABW21813.1| putative arginine decarboxylase [Solanum peruvianum]
 gi|158145167|gb|ABW21815.1| putative arginine decarboxylase [Solanum peruvianum]
          Length = 448

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+     IGLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301


>gi|73808422|gb|AAZ85211.1| arginine decarboxylase [Solanum chmielewskii]
 gi|73808424|gb|AAZ85212.1| arginine decarboxylase [Solanum chmielewskii]
 gi|73808426|gb|AAZ85213.1| arginine decarboxylase [Solanum chmielewskii]
 gi|73808428|gb|AAZ85214.1| arginine decarboxylase [Solanum chmielewskii]
 gi|73808430|gb|AAZ85215.1| arginine decarboxylase [Solanum chmielewskii]
 gi|73808432|gb|AAZ85216.1| arginine decarboxylase [Solanum chmielewskii]
 gi|73808434|gb|AAZ85217.1| arginine decarboxylase [Solanum chmielewskii]
 gi|73808436|gb|AAZ85218.1| arginine decarboxylase [Solanum chmielewskii]
 gi|73808438|gb|AAZ85219.1| arginine decarboxylase [Solanum chmielewskii]
 gi|73808440|gb|AAZ85220.1| arginine decarboxylase [Solanum chmielewskii]
 gi|317455976|gb|ADV29080.1| arginine decarboxylase [Solanum arcanum]
 gi|317455986|gb|ADV29085.1| arginine decarboxylase [Solanum arcanum]
 gi|317455988|gb|ADV29086.1| arginine decarboxylase [Solanum arcanum]
 gi|317455992|gb|ADV29088.1| arginine decarboxylase [Solanum arcanum]
 gi|317455996|gb|ADV29090.1| arginine decarboxylase [Solanum arcanum]
 gi|317456000|gb|ADV29092.1| arginine decarboxylase [Solanum arcanum]
 gi|317456002|gb|ADV29093.1| arginine decarboxylase [Solanum arcanum]
 gi|317456004|gb|ADV29094.1| arginine decarboxylase [Solanum arcanum]
 gi|317456008|gb|ADV29096.1| arginine decarboxylase [Solanum arcanum]
 gi|317456010|gb|ADV29097.1| arginine decarboxylase [Solanum arcanum]
 gi|317456012|gb|ADV29098.1| arginine decarboxylase [Solanum arcanum]
 gi|317456014|gb|ADV29099.1| arginine decarboxylase [Solanum arcanum]
 gi|317456016|gb|ADV29100.1| arginine decarboxylase [Solanum arcanum]
 gi|317456018|gb|ADV29101.1| arginine decarboxylase [Solanum arcanum]
 gi|317456020|gb|ADV29102.1| arginine decarboxylase [Solanum arcanum]
 gi|317456024|gb|ADV29104.1| arginine decarboxylase [Solanum arcanum]
          Length = 448

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+     IGLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301


>gi|61967666|gb|AAX56855.1| putative arginine decarboxylase [Solanum peruvianum]
          Length = 448

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+     IGLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301


>gi|61967670|gb|AAX56857.1| putative arginine decarboxylase [Solanum peruvianum]
 gi|158145137|gb|ABW21800.1| putative arginine decarboxylase [Solanum peruvianum]
 gi|158145153|gb|ABW21808.1| putative arginine decarboxylase [Solanum peruvianum]
 gi|158145155|gb|ABW21809.1| putative arginine decarboxylase [Solanum peruvianum]
 gi|158145157|gb|ABW21810.1| putative arginine decarboxylase [Solanum peruvianum]
 gi|158145165|gb|ABW21814.1| putative arginine decarboxylase [Solanum peruvianum]
 gi|158145169|gb|ABW21816.1| putative arginine decarboxylase [Solanum peruvianum]
 gi|158145181|gb|ABW21822.1| putative arginine decarboxylase [Solanum peruvianum]
 gi|158145221|gb|ABW21842.1| putative arginine decarboxylase [Solanum chilense]
 gi|317455978|gb|ADV29081.1| arginine decarboxylase [Solanum arcanum]
 gi|317455982|gb|ADV29083.1| arginine decarboxylase [Solanum arcanum]
          Length = 448

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+     IGLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301


>gi|61967672|gb|AAX56858.1| putative arginine decarboxylase [Solanum peruvianum]
 gi|61967676|gb|AAX56860.1| putative arginine decarboxylase [Solanum peruvianum]
 gi|61967680|gb|AAX56862.1| putative arginine decarboxylase [Solanum peruvianum]
 gi|61967686|gb|AAX56865.1| putative arginine decarboxylase [Solanum chilense]
 gi|61967690|gb|AAX56867.1| putative arginine decarboxylase [Solanum chilense]
 gi|61967694|gb|AAX56869.1| putative arginine decarboxylase [Solanum chilense]
 gi|61967700|gb|AAX56872.1| putative arginine decarboxylase [Solanum chilense]
 gi|61967702|gb|AAX56873.1| putative arginine decarboxylase [Solanum chilense]
 gi|158145171|gb|ABW21817.1| putative arginine decarboxylase [Solanum peruvianum]
 gi|158145179|gb|ABW21821.1| putative arginine decarboxylase [Solanum peruvianum]
 gi|158145185|gb|ABW21824.1| putative arginine decarboxylase [Solanum peruvianum]
 gi|158145193|gb|ABW21828.1| putative arginine decarboxylase [Solanum peruvianum]
 gi|158145211|gb|ABW21837.1| putative arginine decarboxylase [Solanum chilense]
 gi|158145219|gb|ABW21841.1| putative arginine decarboxylase [Solanum chilense]
 gi|158145233|gb|ABW21848.1| putative arginine decarboxylase [Solanum chilense]
 gi|158145241|gb|ABW21852.1| putative arginine decarboxylase [Solanum chilense]
 gi|158145251|gb|ABW21857.1| putative arginine decarboxylase [Solanum chilense]
 gi|158145253|gb|ABW21858.1| putative arginine decarboxylase [Solanum chilense]
 gi|158145257|gb|ABW21860.1| putative arginine decarboxylase [Solanum chilense]
 gi|317455952|gb|ADV29068.1| arginine decarboxylase [Solanum arcanum]
 gi|317455954|gb|ADV29069.1| arginine decarboxylase [Solanum arcanum]
 gi|317455956|gb|ADV29070.1| arginine decarboxylase [Solanum arcanum]
 gi|317455958|gb|ADV29071.1| arginine decarboxylase [Solanum arcanum]
 gi|317455960|gb|ADV29072.1| arginine decarboxylase [Solanum arcanum]
 gi|317455962|gb|ADV29073.1| arginine decarboxylase [Solanum arcanum]
 gi|317455964|gb|ADV29074.1| arginine decarboxylase [Solanum arcanum]
 gi|317455966|gb|ADV29075.1| arginine decarboxylase [Solanum arcanum]
 gi|317455970|gb|ADV29077.1| arginine decarboxylase [Solanum arcanum]
 gi|317455972|gb|ADV29078.1| arginine decarboxylase [Solanum arcanum]
 gi|317455974|gb|ADV29079.1| arginine decarboxylase [Solanum arcanum]
 gi|317455980|gb|ADV29082.1| arginine decarboxylase [Solanum arcanum]
 gi|317455984|gb|ADV29084.1| arginine decarboxylase [Solanum arcanum]
 gi|317456022|gb|ADV29103.1| arginine decarboxylase [Solanum arcanum]
 gi|317456026|gb|ADV29105.1| arginine decarboxylase [Solanum arcanum]
          Length = 448

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+     IGLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301


>gi|61967712|gb|AAX56878.1| putative arginine decarboxylase [Solanum habrochaites]
 gi|317455876|gb|ADV29030.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455892|gb|ADV29038.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455894|gb|ADV29039.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455896|gb|ADV29040.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455904|gb|ADV29044.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455906|gb|ADV29045.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455908|gb|ADV29046.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455912|gb|ADV29048.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455916|gb|ADV29050.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455918|gb|ADV29051.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455920|gb|ADV29052.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455922|gb|ADV29053.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455924|gb|ADV29054.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455928|gb|ADV29056.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455936|gb|ADV29060.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455938|gb|ADV29061.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455940|gb|ADV29062.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455942|gb|ADV29063.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455944|gb|ADV29064.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455946|gb|ADV29065.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455948|gb|ADV29066.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455950|gb|ADV29067.1| arginine decarboxylase [Solanum habrochaites]
          Length = 448

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+     IGLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301


>gi|61967716|gb|AAX56880.1| putative arginine decarboxylase [Solanum habrochaites]
 gi|317455878|gb|ADV29031.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455884|gb|ADV29034.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455886|gb|ADV29035.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455888|gb|ADV29036.1| arginine decarboxylase [Solanum habrochaites]
          Length = 448

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+     IGLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301


>gi|61967682|gb|AAX56863.1| putative arginine decarboxylase [Solanum peruvianum]
          Length = 448

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+     IGLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301


>gi|61967668|gb|AAX56856.1| putative arginine decarboxylase [Solanum peruvianum]
          Length = 448

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDCAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+     IGLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301


>gi|61967674|gb|AAX56859.1| putative arginine decarboxylase [Solanum peruvianum]
          Length = 448

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEEYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+     IGLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301


>gi|61967664|gb|AAX56854.1| putative arginine decarboxylase [Solanum peruvianum]
 gi|61967678|gb|AAX56861.1| putative arginine decarboxylase [Solanum peruvianum]
 gi|73808452|gb|AAZ85226.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|158145161|gb|ABW21812.1| putative arginine decarboxylase [Solanum peruvianum]
 gi|158145175|gb|ABW21819.1| putative arginine decarboxylase [Solanum peruvianum]
 gi|158145183|gb|ABW21823.1| putative arginine decarboxylase [Solanum peruvianum]
 gi|158145187|gb|ABW21825.1| putative arginine decarboxylase [Solanum peruvianum]
 gi|158145191|gb|ABW21827.1| putative arginine decarboxylase [Solanum peruvianum]
          Length = 448

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+     IGLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301


>gi|297193993|ref|ZP_06911391.1| lysine/ornithine decarboxylase [Streptomyces pristinaespiralis ATCC
           25486]
 gi|297152049|gb|EFH31499.1| lysine/ornithine decarboxylase [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 319

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 60/191 (31%), Gaps = 17/191 (8%)

Query: 27  NAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH-EKFGGETHAY-NVAYKDC 84
           +A V    A+K      +   L+    G   +S  E+ L         +    + A    
Sbjct: 129 DAPVLHAFAVKAAPLVPVLALLHAEGIGAEVASPGELALARAAGLPAGSIVLDSPAKTVA 188

Query: 85  EIDAVLSNCDTIIFNTVSQLNKFKDK--AQKLHKKIGLRINPSVSYSKFILADPNRPFSR 142
           E+   L     +  +   +L +  D   A      +GLR+N  V            P S+
Sbjct: 189 ELREALDLGIAVNADNWQELARIDDLVAAGPTASPLGLRVNAQVGGGSIGALSTATPTSK 248

Query: 143 LGEKCKD--------KIESEIKNVNGLMFHNNCE----NKSFLCFSAMLKNIEKEFGHFI 190
            G   +D        +   E   +  L  H+  +     +      A+ +  E+      
Sbjct: 249 FGVTLRDEGARDRVVRACLERPWLTRLHTHSGSQGMALTRMTEGVLAVYELAEEINAAAG 308

Query: 191 -TQIEWISLGG 200
             Q + I +GG
Sbjct: 309 RRQFDTIDIGG 319


>gi|270158389|ref|ZP_06187046.1| arginine decarboxylase [Legionella longbeachae D-4968]
 gi|289163366|ref|YP_003453504.1| biosynthetic arginine decarboxylase [Legionella longbeachae NSW150]
 gi|269990414|gb|EEZ96668.1| arginine decarboxylase [Legionella longbeachae D-4968]
 gi|288856539|emb|CBJ10334.1| putative biosynthetic arginine decarboxylase [Legionella
           longbeachae NSW150]
          Length = 632

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 47/339 (13%), Positives = 90/339 (26%), Gaps = 52/339 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQ---YMD 53
           P  +     L + +         A          KL+  +K      +   L +   +  
Sbjct: 58  PLLIRSPDILHDRVHRIYEAFTQAKEENEYAGNYKLVYPIKVNQEQSVVRELLKSPNHTI 117

Query: 54  GTTSSSLYEVMLGHEKFGG--ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA 111
           G  + S  E+M          E+      YKD            +       + K  + A
Sbjct: 118 GLEAGSKPELMAVIGMLSNHQESTIVCNGYKDSYYIRTALIAQQMGHKVFIVIEKISELA 177

Query: 112 QKLHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKI--------ESEIK 156
             L +   L I P+       +S S           S+ G   K  +           + 
Sbjct: 178 IILKESARLNIKPTLGVRIRLISKSAGKWEHTGGVKSKFGLNAKQVLELIAQLKAHDMLD 237

Query: 157 NVNGLMFHNNCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213
            +  +  H   +  +       ++       E       I+ I +GGG+    +      
Sbjct: 238 CLQLMHCHLGSQIANIHDIRHCMQEVSRYYVELRQLNAPIDTIDVGGGLSVDYEGTHSNQ 297

Query: 214 FCQ--------------RLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDIS--EN 254
            C                ++   ++Y+     I  E G A+  +   L   + DI     
Sbjct: 298 GCSMNYSLHEYATHILLAIQYLCQEYNVPEPNIISESGRALTAHHAVLIADISDIEIIHK 357

Query: 255 IKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVC 293
              L  + S     + D  +Y    +I  +         
Sbjct: 358 QPTLPEITSEDSHVIRD--IYDTYQSITNSAPIEIYNYA 394


>gi|261345670|ref|ZP_05973314.1| arginine 2-monooxygenase [Providencia rustigianii DSM 4541]
 gi|282566153|gb|EFB71688.1| arginine 2-monooxygenase [Providencia rustigianii DSM 4541]
          Length = 634

 Score = 61.3 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 75/262 (28%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 63  PALFCFPQILQHRLRSINAAFKRARESYGYKGDYFLVYPIKVNQQRRVIESLVNSGEPLG 122

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L +          N       I        L +   ++   +S++   
Sbjct: 123 LEAGSKAELMAVLANAGRTRTVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIEMV 182

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
             +A++L+    L +   ++         +     + G      ++            ++
Sbjct: 183 LKEAERLNVTPRLGVRARLASQGSGKWQASGGEKSKFGLAATQVLQLVEILRNANRLDSL 242

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       IE   +GGG+    +    +  C
Sbjct: 243 QLLHFHLGSQMANIRDIATGVREAARFYVELHQLGVNIECFDVGGGLGVDYEGTRSQSDC 302

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  +    G+A 
Sbjct: 303 S-VNYGLNEYANNVIWAIGDAC 323


>gi|73808420|gb|AAZ85210.1| arginine decarboxylase [Solanum ochranthum]
          Length = 444

 Score = 61.3 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+     IGLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMAVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301


>gi|15805278|ref|NP_293967.1| arginine decarboxylase [Deinococcus radiodurans R1]
 gi|46397735|sp|Q9RXR4|SPEA_DEIRA RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|6457912|gb|AAF09826.1|AE001885_10 arginine decarboxylase [Deinococcus radiodurans R1]
          Length = 662

 Score = 60.9 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/277 (11%), Positives = 80/277 (28%), Gaps = 44/277 (15%)

Query: 19  DTALYIRKNAGVKLLL----ALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLGHE-K 69
           +                    +K      + +T+         G  + S  E+ L    K
Sbjct: 104 EAFQAAINEYNYSGHYQGVFPIKVNQRRAVVETVAAAGYDYAHGLEAGSKAELALCLAQK 163

Query: 70  FGGETHAYNVAYKDCE------IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
              +       +KD            L     I     ++L++   +A+ L  K  + + 
Sbjct: 164 MHPDALLCCNGFKDDGFIKLALWGRTLGKNVVITIEKFTELDRILKQAKALGVKPAVGVR 223

Query: 124 PSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNVNGLMFHNNCENKSFLC 174
             +        + +     + G    + +         + + ++  L  H   +      
Sbjct: 224 FKLHARGSGQWEESGGDQAKFGLNAYELLRVVERLKEENMLDSLVMLHTHIGSQITDIRR 283

Query: 175 FSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDK----------DYPVKDFCQRLKEF 221
               ++   + +         ++++++GGG+               +Y VK++   +   
Sbjct: 284 VKVAVREAAQTYAGLIAAGADLKYLNVGGGLGVDYDGSKTTFYASMNYTVKEYAADIVYT 343

Query: 222 SEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDI 251
            ++           I  E G A+  +   L   V+D+
Sbjct: 344 VQEVCKAREVPEPVIVSESGRALTAHHAVLILPVVDV 380


>gi|12229969|sp|O82475|SPE1_BRAJU RecName: Full=Arginine decarboxylase; Short=ADC; Short=ARGDC
 gi|3342902|gb|AAC62017.1| arginine decarboxylase [Brassica juncea]
          Length = 702

 Score = 60.9 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/278 (12%), Positives = 82/278 (29%), Gaps = 36/278 (12%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +     L N L++     +         +  + +  +KC     + + + ++     
Sbjct: 101 PLIVRFPDVLKNRLESLQSAFEFAIQTQGYESRYQGVYPVKCNQDRFIIEDIVEFGSSFR 160

Query: 54  -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
            G  + S  E++L          E       +KD E  ++            I+     +
Sbjct: 161 FGLEAGSKPEILLAMSCLCKGSPEAFLVCNGFKDAEYVSLALLGRKLQLNTVIVLEQEEE 220

Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+     ++K++ +   GLR      +S    +       + G      I          
Sbjct: 221 LDLVIALSKKVNVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTVQIIRVVRKLRDVG 279

Query: 156 --KNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
               +  L FH   +  S        +    +  E      ++E I +GGG+        
Sbjct: 280 MLDCLQLLHFHIGSQIPSTALLSDGVSEAAQLYCELVRLGARMEVIDIGGGLGIDYDGSK 339

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248
             +    +    E+Y+    +     +    +  +  +
Sbjct: 340 SGESDLSVAYSLEEYA-AAVVASVRFVCDQKSVKHPVI 376


>gi|88810930|ref|ZP_01126186.1| Arginine decarboxylase [Nitrococcus mobilis Nb-231]
 gi|88791469|gb|EAR22580.1| Arginine decarboxylase [Nitrococcus mobilis Nb-231]
          Length = 639

 Score = 60.9 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/286 (11%), Positives = 72/286 (25%), Gaps = 42/286 (14%)

Query: 12  QKLLNNLDTALYIRKNAGV----KLLLALKCFAAWGMFDTL---NQYMDGTTSSSLYEVM 64
            ++              G       +  +K      +   +        G    S  E+M
Sbjct: 72  DRVERLCRAFRQAMITHGYAGSYTAVYPIKVNQQRRVVQEILAGADNHVGLECGSKPELM 131

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                           YKD E   +      +  +    + K  +    + +   L + P
Sbjct: 132 GAIAVAPPGGRIICNGYKDREYIRLALRSRQLGLDCWIVVEKCSELELIIAESRRLGVEP 191

Query: 125 S-------VSYSKFILADPNRPFSRLGEKCKDKI--------ESEIKNVNGLMFHNNCEN 169
                    S  +    +     S+ G      +           + ++  L FH   + 
Sbjct: 192 RLGLRVRLASIGEGKWQNTGGEKSKFGLSAAQALAVVERLRAVDRLASLQMLHFHLGSQI 251

Query: 170 KS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK----------DYPVKDFCQ 216
            +                E       I  + +GGG+    +          +Y V+++  
Sbjct: 252 PNIADIQRGIREAARYYVELHRLGAPIGCVDVGGGLGVDYEGTRSRSFCSMNYTVEEYAH 311

Query: 217 RLKEFSEKY-------SVQIYLEPGEAIVTNTTTLNTTVLDISENI 255
            +     +           I  E G A+  +   L T V+D+    
Sbjct: 312 NIVHTLGELASAAGLDHPDIVTESGRAMTAHHAVLITDVVDVDRIP 357


>gi|158145247|gb|ABW21855.1| putative arginine decarboxylase [Solanum chilense]
 gi|158145261|gb|ABW21862.1| putative arginine decarboxylase [Solanum chilense]
          Length = 448

 Score = 60.9 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGVLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+  +   GLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMEVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301


>gi|94985871|ref|YP_605235.1| arginine decarboxylase [Deinococcus geothermalis DSM 11300]
 gi|94556152|gb|ABF46066.1| arginine decarboxylase [Deinococcus geothermalis DSM 11300]
          Length = 706

 Score = 60.9 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/277 (11%), Positives = 74/277 (26%), Gaps = 44/277 (15%)

Query: 19  DTALYIRKNAGVKLLL----ALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLGHE-K 69
           +         G          +K      + +T+         G  + S  E+ L    K
Sbjct: 149 EAFRQAIAEYGYSGHYQGVFPIKVNQRRVVVETIAAAGYEYAHGLEAGSKAELALCLAQK 208

Query: 70  FGGETHAYNVAYKDCE------IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                      +KD            L     I     S+L +   +A+ L  K  + + 
Sbjct: 209 LNPNALLCCNGFKDDGFIKLALWGRTLGKNVVITIEKFSELERILKQARALGVKPAIGVR 268

Query: 124 PSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNVNGLMFHNNCENKSFLC 174
             +        + +     + G    + +         + +  +  L  H   +      
Sbjct: 269 FKLHARGSGQWEESGGDQAKFGLNAYELLRVVERLREENMLDALVMLHTHIGSQITDIRR 328

Query: 175 FSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDK-----------------DYPVKDF 214
               ++   + +        +++++++GGG+                         V   
Sbjct: 329 IKVAVREATQTYAGLIAAGARLKYLNVGGGLGVDYDGSKTTFYASMNYTVAEYAADVVYT 388

Query: 215 CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251
            Q +    E     I  E G A+  +   L   V+D+
Sbjct: 389 VQEVCRAREVPEPTIVSESGRALTAHHAVLVMPVVDV 425



 Score = 39.7 bits (91), Expect = 0.76,   Method: Composition-based stats.
 Identities = 12/100 (12%), Positives = 22/100 (22%), Gaps = 24/100 (24%)

Query: 292 VCGRSCLAGDIFGEFHFEKPVK-------IGD---RISFEDVAGYNINRKNWFNGINMPT 341
           +   +C +     +F   + VK        GD    +    +  Y     +  N      
Sbjct: 566 IVDITCDSDGKIEKFIDLRDVKATLPLHEPGDRPYYLGVFLMGAYQDVLGSAHNLFGKVN 625

Query: 342 IA--------------VKNVDGTIKAIREFSYNDYYNNLS 367
            A                      + I    Y +     S
Sbjct: 626 EAHVTVRPGGKFHIDLFVRGQKARRMIESMGYEEIMLRDS 665


>gi|2183223|gb|AAB60880.1| arginine decarboxylase [Dianthus caryophyllus]
          Length = 725

 Score = 60.9 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/236 (13%), Positives = 71/236 (30%), Gaps = 33/236 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L + L++               +  + +  +KC     + + + ++  G  
Sbjct: 116 PVIIRFPDVLKHRLESLQSAFDFAVRTHGYGSHYQGVYPVKCNQDRYIVEDIVEFGSGFR 175

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQL--NKF 107
               + S  E+++      K   ++      +KD E  ++      +  NTV  +   + 
Sbjct: 176 FGLEAGSKPELLMAMSSLCKGSPDSLLVCNGFKDAEYISLAIIGRKLGLNTVIVIEQEEE 235

Query: 108 KDKAQKLHKKIGLRINPSVSY-----SKFILADPNRPFSRLGEKCKDKIESEI------- 155
            D A +L +K+G+R    V               +    + G      +           
Sbjct: 236 VDMAIELSRKMGIRPVVGVRAKLRTKHSGHFGSTSGEKGKFGLTTTQILRVVRKLESFGM 295

Query: 156 -KNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207
              +  L FH   +  +        A    +  E       +  I +GGG+     
Sbjct: 296 LDCLQLLHFHIGSQIPTTALLSDGVAEASQVYCELTRLGAHMRVIDIGGGLGIDYD 351


>gi|238921231|ref|YP_002934746.1| arginine decarboxylase [Edwardsiella ictaluri 93-146]
 gi|238870800|gb|ACR70511.1| biosynthetic arginine decarboxylase (ADC) [Edwardsiella ictaluri
           93-146]
          Length = 658

 Score = 60.9 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/265 (12%), Positives = 78/265 (29%), Gaps = 30/265 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     +             L+  +K      + ++L       G
Sbjct: 87  PALFCFPQILQHRLRSINAAFQCARASFGYQGDYFLVYPIKVNQQRRVIESLVNSGEPLG 146

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        L +   ++   +S+++  
Sbjct: 147 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKLSEIDVV 206

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIKNV 158
            ++A++L     L +   ++         +     + G      ++          ++++
Sbjct: 207 LEEAKRLDVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAAVQVLQLVETLRQAGHLESL 266

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 267 QLLHFHLGSQMANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDC 326

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTN 240
             +     +Y+  +    G+A   +
Sbjct: 327 S-VNYGLNEYANNVIWGIGDACNEH 350


>gi|221133566|ref|ZP_03559871.1| arginine decarboxylase [Glaciecola sp. HTCC2999]
          Length = 644

 Score = 60.9 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/234 (12%), Positives = 66/234 (28%), Gaps = 31/234 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTL----NQYM 52
           P  +     L   +                    + +  +K      + + +     +Y 
Sbjct: 68  PVVVRFHDVLRAQVVHLNKAFNKCIQEANYQGQYRGVYPVKVNQMREVVEEIVDAGKEYH 127

Query: 53  DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLN 105
            G  + S  E++         E       YKD E   +            I+    S++ 
Sbjct: 128 YGLEAGSKAELITILAYNTTPEALTVLNGYKDEEFVNLAFLAQKLGRKVLIVVEKFSEIA 187

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIK 156
                A +L +   + +   +S       + +     + G    + I +          +
Sbjct: 188 TIIKIANELGEMPMIGLRAKMSVKGRGKWEGSGGDRAKFGLTISEIINAGKTLADAGMGE 247

Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207
           ++  L FH   +    ++          I  E  H    +E++ +GGG+     
Sbjct: 248 SLKLLHFHIGSQLTDIRAVKEAINEGALIYAELRHLGFNLEYVDIGGGLGIDYD 301


>gi|1711492|sp|P49726|SPE1_SOLLC RecName: Full=Arginine decarboxylase; Short=ADC; Short=ARGDC
 gi|295350|gb|AAA61347.1| arginine decarboxylase [Solanum lycopersicum]
          Length = 502

 Score = 60.9 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/237 (13%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +     L N L+T               A  + +  +KC     + + + ++     
Sbjct: 2   PLVVRFPDVLKNRLETLQSAFDMAINSQGYEAHYQGVYPVKCNQDRFVVEDIVKFGSPYR 61

Query: 54  -GTTSSSLYEVMLG---HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109
            G  + S  E++L      K   +       +KD E  ++      ++ N+V  L + ++
Sbjct: 62  FGLEAGSKPELLLAMNCLSKGSADALLVCNGFKDTEYISLALVARKLLLNSVIVLEQEEE 121

Query: 110 K--------AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
                       +   IGLR      +S    +       + G      +          
Sbjct: 122 LDLVIDISRKMSVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVKKLDESG 180

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  +    +  +    + +         +++I +GGG+     
Sbjct: 181 MLDCLQLLHFHIGSQIPTTELLADGVGEATQIYSELVRLGAGMKFIDIGGGLGIDYD 237


>gi|86610204|ref|YP_478966.1| arginine decarboxylase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86558746|gb|ABD03703.1| arginine decarboxylase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 640

 Score = 60.9 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/300 (10%), Positives = 84/300 (28%), Gaps = 44/300 (14%)

Query: 12  QKLLNNLDTALYIRKNAGV----KLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEV 63
            ++    ++     +  G     + +  +K      + + + ++      G  + S  E+
Sbjct: 78  DRMRQICESFQQAIQRFGYPNVYRGVYPVKVNQQRHLVEEVVKHGRAYHFGLEAGSKPEL 137

Query: 64  MLGHEKFG-GETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLNKFKDKAQKLHK 116
           ++                YKD +                I+   + +L      A +L  
Sbjct: 138 LIALALLDTPGALLICNGYKDRDFMETALLAQRLGRTPIIVLERLQELELVLQAADQLGI 197

Query: 117 KIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNVNGLMFHNNC 167
              L +   +S         +     + G    + ++             +  L +H   
Sbjct: 198 DPILGVRAKLSAQGSGRWGTSAGDRAKFGLTATEILQVVERLREAGKLHCLRLLHYHIGS 257

Query: 168 ENKSFLCF---SAMLKNIEKEFGHFITQIEWISLGGGIHFTDK----------DYPVKDF 214
           +                I  E       + ++ +GGG+                Y ++D+
Sbjct: 258 QISMVSVHGRAVREASQIYIELVKLGAPMGYLDIGGGLGVDYDGSQSPNPFSQSYSMEDY 317

Query: 215 CQRLKE-------FSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA 267
              + +               +  E G A++++ + L   V D++      +    + +A
Sbjct: 318 AATVVQTVLTALEPHGIQPPVLVTESGRALMSHQSVLVFDVQDVNAASPYPMPTQLTSDA 377


>gi|317456028|gb|ADV29106.1| arginine decarboxylase [Solanum arcanum]
 gi|317456030|gb|ADV29107.1| arginine decarboxylase [Solanum arcanum]
 gi|317456032|gb|ADV29108.1| arginine decarboxylase [Solanum arcanum]
 gi|317456034|gb|ADV29109.1| arginine decarboxylase [Solanum arcanum]
 gi|317456036|gb|ADV29110.1| arginine decarboxylase [Solanum arcanum]
 gi|317456038|gb|ADV29111.1| arginine decarboxylase [Solanum arcanum]
 gi|317456040|gb|ADV29112.1| arginine decarboxylase [Solanum arcanum]
 gi|317456042|gb|ADV29113.1| arginine decarboxylase [Solanum arcanum]
 gi|317456044|gb|ADV29114.1| arginine decarboxylase [Solanum arcanum]
          Length = 448

 Score = 60.9 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+     IGLR      +S       +    + G      +          
Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFG-STSGETGKFGLTTTQILRVVRKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301


>gi|88799147|ref|ZP_01114727.1| arginine decarboxylase [Reinekea sp. MED297]
 gi|88778130|gb|EAR09325.1| arginine decarboxylase [Reinekea sp. MED297]
          Length = 635

 Score = 60.9 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/269 (11%), Positives = 80/269 (29%), Gaps = 35/269 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L + +       K A          + L  +K      + + + +      
Sbjct: 56  PLLVRFPHILHDRVARINEAFKAAIKIENYQNVYQPLYPIKVNQQRRIVEEIIKGQRLAG 115

Query: 53  ---DGTTSSSLYEVMLGHEKF--GGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
               G  + S  E+M    +   G  T   N    +  I        L +   ++   +S
Sbjct: 116 TPRIGLEAGSKPELMAVMAEAARGATTIVCNGYKDEEYIRLALSAEKLGHHVYLVVEKIS 175

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153
           ++    + A++++    + +   +S       + +     + G    + I          
Sbjct: 176 EVEWILNIAEEMNVLPRIGVRARLSSVGKGKWENSGGEKSKFGLTASEIITITEHLREHD 235

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
            + +   L FH   +    +              E  H    I+ + +GGG+    +   
Sbjct: 236 RLDSFQLLHFHLGSQIANIRDIQLGLRECARFYVELRHLNVPIDIVDVGGGLGVDYEGTQ 295

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
            ++ C  +    ++Y+  +     +A   
Sbjct: 296 SRESCS-MNYSLQEYANNVVFAFRDACTQ 323


>gi|302030074|gb|ADK91572.1| arginine decarboxylase [Solanum lycopersicum]
          Length = 502

 Score = 60.9 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 73/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA----GVKLLL----ALKCFAAWGMFDTLNQYMD--- 53
           P  +     L N L+T       A    G ++       +KC     + + + ++     
Sbjct: 2   PLVVRFPDVLKNRLETLQSAFDMAINSQGYEVHYQGVYPVKCNQDRFVVEDIVKFGSPYR 61

Query: 54  -GTTSSSLYEVMLG---HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109
            G  + S  E++L      K   +       +KD E  ++      ++ N+V  L + ++
Sbjct: 62  FGLEAGSKSELLLAMNCLSKGSADALLVCNGFKDTEYISLALVARKLLLNSVIVLEQEEE 121

Query: 110 K--------AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
                       +   IGLR      +S    +       + G      +          
Sbjct: 122 LDLVIDISRKMSVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVLKKLDESG 180

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  +    +  +    + +         +++I +GGG+     
Sbjct: 181 MLDCLQLLHFHIGSQIPTSELLADGVGEATQIYSELVRLGAGMKFIDIGGGLGIDYD 237


>gi|332995551|gb|AEF05606.1| arginine decarboxylase [Alteromonas sp. SN2]
          Length = 636

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/313 (9%), Positives = 95/313 (30%), Gaps = 48/313 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAG--------VKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +     L + + +     +++          + +  +K      + + + +      
Sbjct: 61  PVVVRFHDILRSQVASLNKAFRSSIEEAEYKGLYQGVYPVKVNQMREVVEEIVEAGAPFN 120

Query: 54  -GTTSSSLYEVMLGHEKFGGET-HAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105
            G  + S  E++        E        YKD E   +      +      +    S+L 
Sbjct: 121 YGLEAGSKAELLTVLAMNTNEDSLTILNGYKDDEFMRLALLGRKLGRKIVVVVEKYSELL 180

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------K 156
                +++L+    + +   ++       + +     + G    + I++           
Sbjct: 181 LLVKVSKELNIDPIIGVRAKMTVKGRGKWESSGGERAKFGLTITEIIKTARYLEEQGMSH 240

Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------ 207
            +  L FH   +    ++          I  +       ++++ +GGG+           
Sbjct: 241 CLKLLHFHIGSQLTDIRAVKEAMTEGARIYADLHKMGFPLDYVDVGGGLGIDYDGSNSTN 300

Query: 208 ----DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
               +Y ++++   +    ++           +  E G AI  + + + T ++   ++  
Sbjct: 301 ESSRNYSMQEYVADVVYGMKEMCDLEGVPHPNLVSESGRAITAHHSCVVTEIVGEIKSNA 360

Query: 257 NLVIVDSSVEAHV 269
             +    +   HV
Sbjct: 361 AQIDTSENENEHV 373


>gi|212712731|ref|ZP_03320859.1| hypothetical protein PROVALCAL_03828 [Providencia alcalifaciens DSM
           30120]
 gi|212684647|gb|EEB44175.1| hypothetical protein PROVALCAL_03828 [Providencia alcalifaciens DSM
           30120]
          Length = 634

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 75/262 (28%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 63  PALFCFPQILQHRLRSINAAFKRARESYGYKGDYFLVYPIKVNQQRRVIESLVNSGEPLG 122

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L +          N       I        L +   ++   +S++   
Sbjct: 123 LEAGSKAELMAVLANAGRTRTVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIEMV 182

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            ++A+KL     L +   ++         +     + G      ++            ++
Sbjct: 183 LEEAKKLEVTPRLGVRARLASQGSGKWQASGGEKSKFGLAATQVLQLVEILRNANRLDSL 242

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 243 QLLHFHLGSQMANIRDIATGVRESARFYVELHQLGVNIQCFDVGGGLGVDYEGTRSQSDC 302

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  +    G+A 
Sbjct: 303 S-VNYGLNEYANNVIWAIGDAC 323


>gi|332290904|ref|YP_004429513.1| Orn/DAP/Arg decarboxylase 2 [Krokinobacter diaphorus 4H-3-7-5]
 gi|332168990|gb|AEE18245.1| Orn/DAP/Arg decarboxylase 2 [Krokinobacter diaphorus 4H-3-7-5]
          Length = 463

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 47/397 (11%), Positives = 114/397 (28%), Gaps = 61/397 (15%)

Query: 13  KLLNNLDT----ALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYMDGTTSSSLY--- 61
           K+ +N+           +  G +         K      + +          +SS +   
Sbjct: 52  KISDNIQRAKKWFADAIQANGYEGSYNYCYCTKSSHFKHVLNEALSNDIHIETSSAFDID 111

Query: 62  --EVMLGHEKFGGETHAYNVAYKDCEIDAVL----SNCDTIIFNTVSQLNKFKDKAQKLH 115
             E +    K   +T+  +  +K       +    +N        +    +    + +++
Sbjct: 112 IVESLKAAGKITDDTYVISNGFKRERYVENIARLINNGHKNAIPVIDNYEEIDLLSNQIN 171

Query: 116 KKIGLRINPSVSYSKFILADPNRPF----SRLGEKCKDKIESEIKNVNGLMFHNNCENK- 170
            K  + I  +           +R      + +         +E   +  L F  N   + 
Sbjct: 172 GKFKVGIRIASEEEPKFEFYTSRLGIGYKNIVPFFNNQIKNNEKVELKMLHFFINTGIRD 231

Query: 171 --SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHF-------TDKDYPVKDFCQRLKEF 221
              +         +          ++ +++GGG           D  Y + +   ++K+ 
Sbjct: 232 TAYYWNELMKCIKVYINLKKICPSLDSLNIGGGFPIKNSLAFEYDYAYMINEIIAQIKQA 291

Query: 222 SEK---YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLLYQ 276
            +        I+ E G   V  +      VL   +        +++SS    +PD     
Sbjct: 292 CDDADVKVPNIFTEFGSFTVGESGGAIYEVLYQKQQNDREKWNMINSSFITTLPDTWAIN 351

Query: 277 ESATI----YPNTGPYTAMVCGRSCLAGD-----------IFGEFHFEKPVKIGDRISFE 321
           +   +      N      ++ G +C + D              ++  +KP+ IG    F 
Sbjct: 352 KRFIMLAVNRWNEEYERVLLGGLTCDSDDYYNSEQHMNAIYMPKYKKDKPLYIG----FF 407

Query: 322 DVAGYNINRKNWFNG-----INMPTIAVKNVDGTIKA 353
           +   Y  +    F G     +  P   + + +   + 
Sbjct: 408 NTGAYQESIG-GFGGLQHCLVPSPKHILIDRNEDGEI 443


>gi|157412394|ref|YP_001483260.1| arginine decarboxylase [Prochlorococcus marinus str. MIT 9215]
 gi|166979641|sp|A8G243|SPEA_PROM2 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|157386969|gb|ABV49674.1| Orn/DAP/Arg decarboxylase family 2 [Prochlorococcus marinus str.
           MIT 9215]
          Length = 648

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 44/316 (13%), Positives = 100/316 (31%), Gaps = 48/316 (15%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAG--------VKLLLALKCFAAWGMFDTLNQYMD 53
           I TP  +     L + ++        A          + +  +KC     + + + ++  
Sbjct: 66  INTPLIIRFNDILKDRINALHDAFLKAIKTYKYKNIYQGVFPVKCNQQKNVLEKIIEFGS 125

Query: 54  ----GTTSSSLYEVMLGHEKFGG-ETHAYNVAYKDCEIDAVLSNCD------TIIFNTVS 102
               G    S  E+++G        +      YKD +   + +          I+     
Sbjct: 126 PWNFGLEVGSKSELLIGLALLENQNSLLICNGYKDKKYIEIATLARKLGKNPIIVIEQKD 185

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKIE--------S 153
           ++N+  +  Q L+    + I   +S       +      S+ G    + +         +
Sbjct: 186 EVNRIIEAVQDLNASPLIGIRAKLSSKSSGRWSKSVGDNSKFGLSIPEIMSTIKELKEAN 245

Query: 154 EIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDK--- 207
            I  +  L FH   +          L+   + +         +++I +GGG+        
Sbjct: 246 LINEMRLLHFHIGSQISDIAVIKDALQEASQIYVELFKLGAPMKYIDVGGGLGIDFDGTK 305

Query: 208 -------DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISE 253
                  +Y ++++   +    +            I  E G AI+++ + L   VL  S 
Sbjct: 306 TSSNTSTNYSLQNYANDVIATIKDSCELNNIEHPTIISESGRAIISHCSVLIFNVLGTSH 365

Query: 254 NIKNLVIVDSSVEAHV 269
               L I D   ++ +
Sbjct: 366 VSSKLKIYDDKKQSLI 381


>gi|89890104|ref|ZP_01201615.1| arginine decarboxylase [Flavobacteria bacterium BBFL7]
 gi|89518377|gb|EAS21033.1| arginine decarboxylase [Flavobacteria bacterium BBFL7]
          Length = 463

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 50/404 (12%), Positives = 115/404 (28%), Gaps = 63/404 (15%)

Query: 3   KTPY-YLIDKQKLLNNLDT----ALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYMD 53
            +P  +     K+ +N+             A  K         K      + DT      
Sbjct: 42  GSPLKFTY-LPKISDNIQRAQKWFNDAFAKADYKAKYHYCYCTKSSHFKHVLDTALSNDI 100

Query: 54  GTTSSSLYEV---MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK 110
              +SS +++        +   +   Y ++        + +  D I     + +    + 
Sbjct: 101 HLETSSAFDIDIIKKLKAEGKIKDDTYIISNGFKREKYIDNIADLINSGHKNCIPIIDNY 160

Query: 111 --------AQKLHKKIGLRINPSVSYSKFILADPNRPFSR--LGEKCKDKIESEIKNVNG 160
                         K+G+RI                   +  L        E++  ++  
Sbjct: 161 EELNLLTNVTDKKFKVGIRIASEEEPKFEFYTSRLGIGYKNILSFYKNQIQENQQVSLKM 220

Query: 161 LMFHNNCENK---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIH----------FTDK 207
           L F  N   +    +         +          ++ +++GGG            +   
Sbjct: 221 LHFFINTGIRDNAYYWNELHKCLKVYISLKKICPSLDSLNIGGGFPIKNSLAFEFDYEYM 280

Query: 208 DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSV 265
              + +  +++ + ++     I+ E G   V  +      VL   +        +++SS 
Sbjct: 281 INEIVNQIKQVCDEADVDVPHIFTEFGSFTVGESGGAIYKVLYQKQQNDREKWNMINSSF 340

Query: 266 EAHVPDYLLYQESATI----YPNTGPYTAMVCGRSCLAGD-----------IFGEFHFEK 310
              +PD     +   +      N      ++ G +C + D              ++H +K
Sbjct: 341 ITTLPDSWAISKRFIMLALNRWNEEYERVLLGGLTCDSDDYYNSEQNVNAIYLPKYHKDK 400

Query: 311 PVKIGDRISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDG 349
           P+ IG    F +   Y  +    + G     I  P   + + D 
Sbjct: 401 PLYIG----FFNTGAYQESIG-GYGGIQHCLIPAPKHILIDRDE 439


>gi|300113294|ref|YP_003759869.1| arginine decarboxylase [Nitrosococcus watsonii C-113]
 gi|299539231|gb|ADJ27548.1| arginine decarboxylase [Nitrosococcus watsonii C-113]
          Length = 629

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/309 (11%), Positives = 74/309 (23%), Gaps = 46/309 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +     L +   +       A            +  +K      +   +        
Sbjct: 62  PVLVRFSGILHHRAQSLRAAFTEAMTATHYQGSFSAVYPIKVNQQRQVIQEILAADSDRL 121

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCD------TIIFNTVSQLNKF 107
           G  + S  E++                YKD E   +            ++    S+L   
Sbjct: 122 GLEAGSKPELLAVMALSRPGALVICNGYKDREYIRLALMGRQLGLRIYLVVEKPSELEHI 181

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIKNV 158
             +AQ L  +  L +   ++               + G   +  +           I  +
Sbjct: 182 IRQAQALKVEPLLGVRVRLASIGKGKWQNTGGEKGKFGLSAEQVLMMIQRLRQIGMIHCL 241

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK-------- 207
             L FH   +                           +  + +GGG+             
Sbjct: 242 TLLHFHMGSQLPNIADIQRGIREAGRYYATLRELGVPLRSVDVGGGLGVDYDGTHTRGLC 301

Query: 208 ------DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
                           L E  E +     +I  E G A+V +   L + ++DI       
Sbjct: 302 STNYTLPEYAHKIVHGLWETCETHQLPHPEIITEAGRAMVAHHAILISNIIDIQPAPGKE 361

Query: 259 VIVDSSVEA 267
                +V+ 
Sbjct: 362 EPPAPAVDD 370


>gi|301062808|ref|ZP_07203406.1| arginine 2-monooxygenase [delta proteobacterium NaphS2]
 gi|300443070|gb|EFK07237.1| arginine 2-monooxygenase [delta proteobacterium NaphS2]
          Length = 639

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/306 (11%), Positives = 79/306 (25%), Gaps = 48/306 (15%)

Query: 11  KQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD----GTTSS 58
           +  L + +         A          + +  +K      + + + ++      G  + 
Sbjct: 73  ENILRSQIKELNDSFAAAIQEYGYQGAYRAVYPIKVNQQQQVVEAIARFGSEYHHGLEAG 132

Query: 59  SLYEVMLGHEKF-GGETHAYNVAYKDCE------IDAVLSNCDTIIFNTVSQLNKFKDKA 111
           S  E++         E       YKD E          +      +     +L+   +++
Sbjct: 133 SKAELIAALSFLDDPEACLICNGYKDREFVDLGLYACRMGLKCFFVVEIPGELDLILERS 192

Query: 112 QKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNVNGLM 162
           + L  +  + +   VS         +       G      +           +     L 
Sbjct: 193 KALGIRPLIGVRIKVSTQGGGHWMESGGDRSIFGLSITQVLTVVEKLKRCEMLDCFQLLH 252

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDK------------ 207
           +H   +  +     + +    + +         + +  LGGG+                 
Sbjct: 253 YHLGSQIPNIRDIRSAVMEACRVYAGLVDEGAPMRYFDLGGGLAVDYDGSNTNYVTSRNY 312

Query: 208 --DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD 262
             +    D  + +    ++       I  E G AIV   + L   VLD        +   
Sbjct: 313 GLNEYCSDIIESIMSILDEENIPHPTIITETGRAIVAYYSVLLFNVLDSRRFEGEPIPET 372

Query: 263 SSVEAH 268
                H
Sbjct: 373 LPENTH 378


>gi|33340511|gb|AAQ14851.1|AF321137_1 arginine decarboxylase [Nicotiana tabacum]
          Length = 721

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 66/237 (27%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +     L N L++               A  + +  +KC     + + + ++     
Sbjct: 113 PLVVRFPDVLKNRLESLQSAFDLAVHSQGYGAHYQGVYPVKCNQDRFVVEDIVKFGSPFR 172

Query: 54  -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQ 103
            G  + S  E++L          E       +KD E          L     I+     +
Sbjct: 173 FGLEAGSKPELLLAMSCLCKGSAEGLLVCNGFKDAEYISLALVARKLMLNTVIVLEQEEE 232

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D + K+     IGLR      +S    +       + G      +          
Sbjct: 233 LDLVIDISHKMAVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQIVRVVKKLEESG 291

Query: 156 --KNVNGLMFHNNCEN---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207
               +  L FH   +                I  E       +++I +GGG+     
Sbjct: 292 MLDCLQLLHFHIGSQIPSTGLLADGVGEAAQIYCELVRLGAGMKFIDIGGGLGIDYD 348


>gi|7230375|gb|AAF42972.1|AF127241_1 arginine decarboxylase 2 [Nicotiana tabacum]
          Length = 721

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 66/237 (27%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +     L N L++               A  + +  +KC     + + + ++     
Sbjct: 113 PLVVRFPDVLKNRLESLQSAFDLAVHSQGYGAHYQGVYPVKCNQDRFVVEDIVKFGSPFR 172

Query: 54  -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQ 103
            G  + S  E++L          E       +KD E          L     I+     +
Sbjct: 173 FGLEAGSKPELLLAMSCLCKGSAEGLLVCNGFKDAEYISLALVARKLMLNTVIVLEQEEE 232

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D + K+     IGLR      +S    +       + G      +          
Sbjct: 233 LDLVIDISHKMAVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQIVRVVKKLEESG 291

Query: 156 --KNVNGLMFHNNCEN---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207
               +  L FH   +                I  E       +++I +GGG+     
Sbjct: 292 MLDCLQLLHFHIGSQIPSTGLLADGVGEAAQIYCELVRLGAGMKFIDIGGGLGIDYD 348


>gi|296164216|ref|ZP_06846811.1| decarboxylase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295900432|gb|EFG79843.1| decarboxylase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 146

 Score = 60.2 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 17/113 (15%), Positives = 41/113 (36%), Gaps = 4/113 (3%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVK--LLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           P++++   +   NL     +  +AG++  +  A K   A        Q   G  ++S  E
Sbjct: 33  PFHVLFAPRFAQNLKAFTDVIDSAGIQGQVFFAKKANKAGCWLRVCAQVGAGVDAASAPE 92

Query: 63  VMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
           ++        G +      A  +  +     +   I  + + +L++    A +
Sbjct: 93  LVHALSCGVRGSDIVVTGPAKSEQLLWLAARHGCLIAVDALDELDRVIALAHR 145


>gi|330863542|emb|CBX73658.1| hypothetical protein YEW_CV11700 [Yersinia enterocolitica W22703]
          Length = 111

 Score = 60.2 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 9/89 (10%), Positives = 26/89 (29%), Gaps = 6/89 (6%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           P +  D + + + ++            +  A K  +   +   +++      S SL E+ 
Sbjct: 27  PVWAYDGEIITSKINQLWNFDV-----IRFAQKACSNIHILRLMHEQGVKVDSVSLGEIE 81

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVLSN 92
                 F    +   ++        +   
Sbjct: 82  RALQAGFQPGRNLLRLSLPPICWIRLPYC 110


>gi|328950147|ref|YP_004367482.1| Biosynthetic arginine decarboxylase [Marinithermus hydrothermalis
           DSM 14884]
 gi|328450471|gb|AEB11372.1| Biosynthetic arginine decarboxylase [Marinithermus hydrothermalis
           DSM 14884]
          Length = 630

 Score = 60.2 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/303 (9%), Positives = 76/303 (25%), Gaps = 44/303 (14%)

Query: 11  KQKLLNNLDTALYIRKNAGVKLLL----ALKCFAAWGMFDTLNQYM----DGTTSSSLYE 62
           + ++    +         G +        +K      + +T+ +       G  + S  E
Sbjct: 73  EARVRELNEAFRAAIAKYGYQGAYQGVYPVKVNQRRVVVETIARAGRPYAFGLEAGSKAE 132

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT-------IIFNTVSQLNKFKDKAQKLH 115
           + L   +   E           E    L+           I     ++L +    A +L 
Sbjct: 133 LALILAQELAEDALVTCNGFKDEDFVRLALMGKKLGKRVVITLEKFAELARVLRVAHELG 192

Query: 116 KKIGLRINPSVSYSKFILADPN-RPFSRLGEKCKDKIESEI--------KNVNGLMFHNN 166
            +  L +   +          +    ++ G    + + +           ++  L  H  
Sbjct: 193 VRPLLGLRFKLRAKGSGQWASSGGEGAKFGLSAPEVLRAVEVLREVGMLDSLVMLHAHIG 252

Query: 167 CENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------------- 207
            +                   +       I +++LGGG+                     
Sbjct: 253 SQITDIRRIKAAVREAAQTYVQLRRLGAPIRYLNLGGGLAVDYDGSKSAFYASANYTTWE 312

Query: 208 -DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE 266
               +    + + +   +    +  E G A+    + L   V+D+        +      
Sbjct: 313 YAEDLVYVTKEVADQHREVHPILVTESGRALTAYHSVLVLQVIDVIRPPGEAAVEVPEDA 372

Query: 267 AHV 269
             +
Sbjct: 373 HQL 375


>gi|146281364|ref|YP_001171517.1| arginine decarboxylase [Pseudomonas stutzeri A1501]
 gi|145569569|gb|ABP78675.1| biosynthetic arginine decarboxylase [Pseudomonas stutzeri A1501]
          Length = 637

 Score = 60.2 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/314 (12%), Positives = 89/314 (28%), Gaps = 48/314 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFD-TLNQYM--D 53
           P  +     L + +                      L  +K      + +  +       
Sbjct: 70  PLLVRFPGILQDRVRRLTGAFDANIERMEYAGKYTALYPIKVNQQEAVVENIIATQNVSI 129

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNKF 107
           G  + S  E+M                YKD E          L +   I+    S++   
Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHKVFIVIEKESEVGLV 189

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158
            ++A +L     + +   +S               + G      +            + +
Sbjct: 190 IEEANELKLTPQVGLRVRLSSLASSKWADTGGERSKFGLSAAQLLSVIERFRAAEMDQGI 249

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207
             L FH   +  +   +    +   + +         +++I +GGG+             
Sbjct: 250 RLLHFHMGSQIANLADYRQGFREAIRYYAELRALNLPVDYIDVGGGLGVDYDGTHSRNAS 309

Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
             +Y + ++   +    +++          I+ E G A+  +   L   V D+  +   +
Sbjct: 310 SINYDIDEYAGTVVGMLKEFCEAQGLPHPNIFSESGRAMTAHHAVLVMQVTDVERHNDEV 369

Query: 259 VIVDSSVEAHVPDY 272
             +D+  E  +PD 
Sbjct: 370 PQIDNYAE--LPDV 381


>gi|46371995|gb|AAP36992.2| arginine decarboxylase [Cucumis sativus]
          Length = 717

 Score = 60.2 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/278 (12%), Positives = 78/278 (28%), Gaps = 35/278 (12%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +     L N L++               +  + +  +KC     + + + ++     
Sbjct: 121 PLIVRFPDVLKNRLESLQSAFDYAIQSQGYGSHYQGVYPVKCNQDRFVVEDIVKFGSSFR 180

Query: 54  -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109
            G  + S  E++L          +       +KD E  ++      +  NTV  + + ++
Sbjct: 181 FGLEAGSKPELLLAMSCLCKGNSDAFLVCNGFKDAEYISLALIARKLALNTVIVIEQEEE 240

Query: 110 KAQKLHKKIGLRINPSVSY-------SKFILADPNRPFSRLGEKCKDKIE--------SE 154
               +     L + P V                 +    + G      +           
Sbjct: 241 IDLVIDLSKRLFVRPVVGMRAKLRTKHSGHFGSTSGEKGKFGLTTTQILRVVRKLEQADM 300

Query: 155 IKNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
           +  +  L FH   +  S             I  E       +  I +GGG+         
Sbjct: 301 LDCLQLLHFHIGSQIPSTALLADGVGEAAQIYCELVRLGANMRVIDIGGGLGIDYDGSKS 360

Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVL 249
            D    +    E+Y+  +        V +  ++   ++
Sbjct: 361 SDSELSVAYGLEEYAAAVVDAVR--CVCDCRSVKHPII 396


>gi|21115130|gb|AAM43099.1| biosynthetic arginine decarboxylase [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66575582|gb|AAY50992.1| biosynthetic arginine decarboxylase [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 675

 Score = 60.2 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 49/332 (14%), Positives = 99/332 (29%), Gaps = 46/332 (13%)

Query: 29  GVKLLLALKCFAAWGMFDTLNQY---MDGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCE 85
           G   +  +K     G+  TL  +     G  + S  E+M                YKD E
Sbjct: 138 GYTAVYPIKVNQHRGVAGTLASHHGEGFGLEAGSKPELMAVLALSRPGGLIVCNGYKDRE 197

Query: 86  IDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRP 139
              +            I+    S+LN   ++A+ L  K GL +   ++         +  
Sbjct: 198 YIRLALIGRKLGLQTFIVIEKPSELNLVLEEARALDVKPGLGVRMRLASLGAGKWQNSGG 257

Query: 140 FS-RLGEKCKDKIE--------SEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---G 187
              + G   +  ++            ++N L FH   +  +    +  ++   + F    
Sbjct: 258 DKAKFGLSPRQVLDLWKSLRDTEYADSLNLLHFHMGSQISNVRDIANGMREATRYFVELS 317

Query: 188 HFITQIEWISLGGGIHFTDKDYPVKDFCQR--------------LKEFSEKY---SVQIY 230
               +I  + +GGG+    +    + +C                L    E++     +I 
Sbjct: 318 RLGAKISHVDVGGGLGIDYEGTRSRSYCSINYGLHSYASNIVQPLASACEEHGLPPPRIV 377

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE----AHVPDYL-LYQESATIYPNT 285
            E G A+  +   L   V ++ +  +  V      E     H+ +          +    
Sbjct: 378 TECGRAMTAHHAVLIANVSEVEQAPEGRVPDAHDDEPAAIRHLREIHDELDVRPAVELFQ 437

Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDR 317
                   G   L+    G+       +I D 
Sbjct: 438 EAQHFHAEG---LSAYALGQIDLTHRARIDDL 466


>gi|327479540|gb|AEA82850.1| arginine decarboxylase [Pseudomonas stutzeri DSM 4166]
          Length = 637

 Score = 60.2 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 35/307 (11%), Positives = 85/307 (27%), Gaps = 46/307 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFD-TLNQYM--D 53
           P  +     L + +                      L  +K      + +  +       
Sbjct: 70  PLLVRFPGILQDRVRRLTGAFDANIERMEYAGKYTALYPIKVNQQEAVVENIIATQNVSI 129

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNKF 107
           G  + S  E+M                YKD E          L +   I+    S++   
Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHKVFIVIEKESEVGLV 189

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNV 158
            ++A +L     + +   +S               + G      +            + +
Sbjct: 190 IEEANELKLTPQVGLRVRLSSLASSKWADTGGERSKFGLSAAQLLSVIERFRAAEMDQGI 249

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207
             L FH   +  +   +    +   + +         +++I +GGG+             
Sbjct: 250 RLLHFHMGSQIANLADYRQGFREAIRYYAELRALNLPVDYIDVGGGLGVDYDGTHSRNAS 309

Query: 208 --DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
             +Y + ++   +    +++          I+ E G A+  +   L   V D+  +   +
Sbjct: 310 SINYDIDEYAGTVVGMLKEFCEAQGLPHPNIFSESGRAMTAHHAVLVMQVTDVERHNDEI 369

Query: 259 VIVDSSV 265
             +D+  
Sbjct: 370 PQIDNYD 376


>gi|73808446|gb|AAZ85223.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|73808448|gb|AAZ85224.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|73808450|gb|AAZ85225.1| arginine decarboxylase [Solanum pimpinellifolium]
          Length = 448

 Score = 60.2 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGTGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+     IGLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301


>gi|59668404|emb|CAI39242.1| arginine decarboxylase [Solanum lycopersicum]
          Length = 707

 Score = 60.2 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 109 PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGTGFR 168

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 169 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 228

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+     IGLR      +S    +       + G      +          
Sbjct: 229 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 287

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 288 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 344


>gi|289207388|ref|YP_003459454.1| arginine decarboxylase [Thioalkalivibrio sp. K90mix]
 gi|288943019|gb|ADC70718.1| arginine decarboxylase [Thioalkalivibrio sp. K90mix]
          Length = 634

 Score = 60.2 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 42/327 (12%), Positives = 92/327 (28%), Gaps = 55/327 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAG--------VKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +  +  L   +         A            +  +K      + D +    D   
Sbjct: 63  PVLVRFQDVLDGRVRRLARAFDAAARELEYEGAFTAIYPIKVNQQRSVVDQILAAGDQPD 122

Query: 54  --------GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVL------SNCDTIIFN 99
                   G  + S  E+M    +           YKD E   +        +   I+  
Sbjct: 123 AEGLTPRVGLEAGSKPELMAVLAQSRPGAAIICNGYKDREYVRLALIGRQLGHRVYIVIE 182

Query: 100 TVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES----- 153
             S+L +   +A+ +  +  L +   ++               + G    D +       
Sbjct: 183 KPSELEEVIRQAEAMQVEPLLGLRVRLASIGKGKWQNTGGEKAKFGLSAADVLGILGRLR 242

Query: 154 ---EIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDK 207
               +  +  L FH   +  +       +      F         +  + +GGG+    +
Sbjct: 243 GLGWLDRLQLLHFHMGSQIANIRDIQNGMGEAASYFAALTEAGAALRVVDVGGGLGIDYE 302

Query: 208 ----------DYPVKDFC-------QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD 250
                     +Y V+++        +R+ E       +++ E G A+  +   L T V+D
Sbjct: 303 GSRSRNECSINYSVEEYALNILRPLKRICEEQGLAMPEVFSESGRALTAHHAVLITNVID 362

Query: 251 ISENIKNLVIVDSSVEAHVPDYLLYQE 277
             E       V  +    +P+    + 
Sbjct: 363 -CEPAPGDGDVPPAENGELPEIAAMRA 388


>gi|118113174|ref|XP_001236802.1| PREDICTED: similar to ornithine decarboxylase antizyme inhibitor,
           partial [Gallus gallus]
          Length = 111

 Score = 60.2 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 22/56 (39%)

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347
           + G SC   D   E      + +GD + F+++    +  ++ FN    P I     
Sbjct: 52  LWGPSCDELDQIVENCLLPELSVGDWLIFDNMGSGTLGEQSTFNDYQRPLIYYMMS 107


>gi|254429276|ref|ZP_05042983.1| arginine decarboxylase [Alcanivorax sp. DG881]
 gi|196195445|gb|EDX90404.1| arginine decarboxylase [Alcanivorax sp. DG881]
          Length = 626

 Score = 60.2 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 31/235 (13%), Positives = 60/235 (25%), Gaps = 31/235 (13%)

Query: 14  LLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL---NQYM--DGTTSSSL 60
           L   +       + A            +  +K      +   +          G  + S 
Sbjct: 69  LRQRVKLLAGAFREAIESHQYQGDYTPVYPIKVNQQRRVVHEILRARDEGERVGLEAGSK 128

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNKFKDKAQKL 114
            E++                YKD E          L     I+   +S+L      A +L
Sbjct: 129 PELLAVLALSNPGDTIVCNGYKDAEYLRLALMGEKLGFRVHIVVEKMSELPALLALADEL 188

Query: 115 HKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHN 165
                + +    +S SK    +     S+ G      + +            V  L FH 
Sbjct: 189 GVSPRIGLRVRLMSISKGNWQNTGGEKSKFGLSAPQLMAAIEHCRAAGRLDCVKLLHFHL 248

Query: 166 NCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR 217
             +    +              E       +E + +GGG+    +    + +C  
Sbjct: 249 GSQVANIQDIKAGMREAARYYTEMRALGAAVETVDVGGGLGVDYEGTHSRSYCSM 303


>gi|188993450|ref|YP_001905460.1| arginine decarboxylase [Xanthomonas campestris pv. campestris str.
           B100]
 gi|167735210|emb|CAP53422.1| Arginine decarboxylase [Xanthomonas campestris pv. campestris]
          Length = 675

 Score = 60.2 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 49/332 (14%), Positives = 99/332 (29%), Gaps = 46/332 (13%)

Query: 29  GVKLLLALKCFAAWGMFDTLNQY---MDGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCE 85
           G   +  +K     G+  TL  +     G  + S  E+M                YKD E
Sbjct: 138 GYTAVYPIKVNQHRGVAGTLASHHGEGFGLEAGSKPELMAVLALSRPGGLIVCNGYKDRE 197

Query: 86  IDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRP 139
              +            I+    S+LN   ++A+ L  K GL +   ++         +  
Sbjct: 198 YIRLALIGRKLGLQTFIVIEKPSELNLVLEEARALDVKPGLGVRMRLASLGAGKWQNSGG 257

Query: 140 FS-RLGEKCKDKIE--------SEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---G 187
              + G   +  ++            ++N L FH   +  +    +  ++   + F    
Sbjct: 258 DKAKFGLSPRQVLDLWKSLRDTEYADSLNLLHFHMGSQISNVRDIANGMREATRYFVELS 317

Query: 188 HFITQIEWISLGGGIHFTDKDYPVKDFCQR--------------LKEFSEKY---SVQIY 230
               +I  + +GGG+    +    + +C                L    E++     +I 
Sbjct: 318 RLGAKISHVDVGGGLGIDYEGTRSRSYCSINYGLHSYASNIVQPLASACEEHGLPPPRIV 377

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE----AHVPDYL-LYQESATIYPNT 285
            E G A+  +   L   V ++ +  +  V      E     H+ +          +    
Sbjct: 378 TECGRAMTAHHAVLIANVSEVEQAPEGRVPDAHDDEPAAIRHLREIHDELDVRPAVELFQ 437

Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDR 317
                   G   L+    G+       +I D 
Sbjct: 438 EAQHFHAEG---LSAYALGQIDLTHRARIDDL 466


>gi|312282713|dbj|BAJ34222.1| unnamed protein product [Thellungiella halophila]
          Length = 725

 Score = 60.2 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 70/237 (29%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +     L N L+               ++  + +  +KC     + + + ++     
Sbjct: 115 PLIVRFPDVLKNRLECLQSAFDFAIQSQGYDSHYQGVYPVKCNQDRFVVEDIVRFGSPFR 174

Query: 54  -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
            G  + S  E++L          +       +KD E  ++            I+     +
Sbjct: 175 FGLEAGSKPEILLAMSCLCKGNPDAFLVCNGFKDAEYISLALLGRKLALNTLIVLEQEEE 234

Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D +QK++ +   GLR      +S    +       + G      +          
Sbjct: 235 LDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTSQIVRVMRKLSQSG 293

Query: 156 --KNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207
               +  L FH   +  S        A    +  E       I+ I +GGG+     
Sbjct: 294 MLDCLQLLHFHIGSQIPSTPLLTDGVAEAAQLYCELVRLGANIKVIDIGGGLGIDYD 350


>gi|297798446|ref|XP_002867107.1| hypothetical protein ARALYDRAFT_491183 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312943|gb|EFH43366.1| hypothetical protein ARALYDRAFT_491183 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 707

 Score = 60.2 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 70/237 (29%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +     L N L+               ++  + +  +KC     + + + ++     
Sbjct: 104 PLIVRFPDVLKNRLECLQSAFDFAIKSQGYDSHYQGVYPVKCNQDRFVVEDIVKFGSSFR 163

Query: 54  -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
            G  + S  E++L          +       +KD E  ++            I+     +
Sbjct: 164 FGLEAGSKPEILLAMSCLCKGNPDAFLVCNGFKDAEYISLALLGRKLALNTVIVLEQEEE 223

Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D +QK++ +   GLR      +S    +       + G      +          
Sbjct: 224 LDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQIVRVLRKLSQSG 282

Query: 156 --KNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207
               +  L FH   +  S        A    +  E       ++ I +GGG+     
Sbjct: 283 MLDCLQLLHFHIGSQIPSTSLLSDGVAEAAQLYCELVRLGAHMKVIDIGGGLGIDYD 339


>gi|61967704|gb|AAX56874.1| putative arginine decarboxylase [Solanum habrochaites]
 gi|61967706|gb|AAX56875.1| putative arginine decarboxylase [Solanum habrochaites]
 gi|61967710|gb|AAX56877.1| putative arginine decarboxylase [Solanum habrochaites]
 gi|61967714|gb|AAX56879.1| putative arginine decarboxylase [Solanum habrochaites]
 gi|61967718|gb|AAX56881.1| putative arginine decarboxylase [Solanum habrochaites]
 gi|317455848|gb|ADV29016.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455850|gb|ADV29017.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455854|gb|ADV29019.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455856|gb|ADV29020.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455858|gb|ADV29021.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455860|gb|ADV29022.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455864|gb|ADV29024.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455866|gb|ADV29025.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455868|gb|ADV29026.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455870|gb|ADV29027.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455872|gb|ADV29028.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455874|gb|ADV29029.1| arginine decarboxylase [Solanum habrochaites]
 gi|317455882|gb|ADV29033.1| arginine decarboxylase [Solanum habrochaites]
          Length = 448

 Score = 60.2 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 71/237 (29%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+     IGLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         + +I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMNFIDIGGGLGIDYD 301


>gi|61967708|gb|AAX56876.1| putative arginine decarboxylase [Solanum habrochaites]
          Length = 448

 Score = 60.2 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 71/237 (29%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 125

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+     IGLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         + +I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMNFIDIGGGLGIDYD 301


>gi|83649041|ref|YP_437476.1| arginine decarboxylase [Hahella chejuensis KCTC 2396]
 gi|83637084|gb|ABC33051.1| arginine decarboxylase [Hahella chejuensis KCTC 2396]
          Length = 636

 Score = 60.2 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/297 (11%), Positives = 79/297 (26%), Gaps = 50/297 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLA--------LKCFAAWGMFDTL-------N 49
           P  +     L + ++        A  +L  +        +K      + + +        
Sbjct: 61  PVLVRFADILHHRVNHLCEAFNRAAEQLAYSGRYTAVYPVKVNQQRRVIEEIVAAQPAAA 120

Query: 50  QYMDGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109
               G  + S  E++                YKD E   +      + +     + K  +
Sbjct: 121 NGQIGLEAGSKPELIAVLAMSNPGATIVCNGYKDREFIRLALLGQQMGYKVYIVVEKLNE 180

Query: 110 KAQKLHKKIGLRINPSVSYS-------KFILADPNRPFSRLGEKCKDKIESEI------- 155
               L +   + + P +          K    +     S+ G      ++          
Sbjct: 181 LTYVLEESRSMGVTPRIGVRARLASIGKGNWQNTGGEKSKFGLSSVQILQVLDTLKQANA 240

Query: 156 -KNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---- 207
            +++  L FH   +    +              E       ++ + +GGG+    +    
Sbjct: 241 LESLQLLHFHLGSQIANIRDIQTGLRECARFYGELRRQGADVKIVDVGGGLGIDYEGTRS 300

Query: 208 ----------DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDI 251
                             + +KE  ++       +  E G AI  +   L T V+D 
Sbjct: 301 RSACSVNYSVHEYAFHVLRTIKEECDREGIPHPNVITESGRAITAHHAVLITDVIDR 357


>gi|77747964|ref|NP_639208.2| arginine decarboxylase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|77761320|ref|YP_245012.2| arginine decarboxylase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|48474871|sp|Q8P448|SPEA_XANCP RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
          Length = 628

 Score = 59.8 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 49/332 (14%), Positives = 99/332 (29%), Gaps = 46/332 (13%)

Query: 29  GVKLLLALKCFAAWGMFDTLNQY---MDGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCE 85
           G   +  +K     G+  TL  +     G  + S  E+M                YKD E
Sbjct: 91  GYTAVYPIKVNQHRGVAGTLASHHGEGFGLEAGSKPELMAVLALSRPGGLIVCNGYKDRE 150

Query: 86  IDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRP 139
              +            I+    S+LN   ++A+ L  K GL +   ++         +  
Sbjct: 151 YIRLALIGRKLGLQTFIVIEKPSELNLVLEEARALDVKPGLGVRMRLASLGAGKWQNSGG 210

Query: 140 FS-RLGEKCKDKIE--------SEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---G 187
              + G   +  ++            ++N L FH   +  +    +  ++   + F    
Sbjct: 211 DKAKFGLSPRQVLDLWKSLRDTEYADSLNLLHFHMGSQISNVRDIANGMREATRYFVELS 270

Query: 188 HFITQIEWISLGGGIHFTDKDYPVKDFCQR--------------LKEFSEKY---SVQIY 230
               +I  + +GGG+    +    + +C                L    E++     +I 
Sbjct: 271 RLGAKISHVDVGGGLGIDYEGTRSRSYCSINYGLHSYASNIVQPLASACEEHGLPPPRIV 330

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE----AHVPDYL-LYQESATIYPNT 285
            E G A+  +   L   V ++ +  +  V      E     H+ +          +    
Sbjct: 331 TECGRAMTAHHAVLIANVSEVEQAPEGRVPDAHDDEPAAIRHLREIHDELDVRPAVELFQ 390

Query: 286 GPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDR 317
                   G   L+    G+       +I D 
Sbjct: 391 EAQHFHAEG---LSAYALGQIDLTHRARIDDL 419


>gi|302538022|ref|ZP_07290364.1| orn/DAP/Arg decarboxylase 2 [Streptomyces sp. C]
 gi|302446917|gb|EFL18733.1| orn/DAP/Arg decarboxylase 2 [Streptomyces sp. C]
          Length = 487

 Score = 59.8 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 22/247 (8%), Positives = 67/247 (27%), Gaps = 14/247 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGV--KLLLALKCFAAWGMFDTLNQYMDGTTSSS 59
           + +P  ++   ++  NL     + +   +  ++  A K   +  +   L     G  ++S
Sbjct: 33  LGSPLNVLLPDQIALNLGAFRSVLRGHQLSGRVFFAHKANRSSALVRRLTTTEAGLDAAS 92

Query: 60  LYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           L E+       F G+            +         +  + + +L +     +      
Sbjct: 93  LAELQHALGSGFTGDKVMVTGPKDPEFLWLAARAGAIVNADGIGELVEAAGFVRSHGLPR 152

Query: 119 GLRI-----NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFL 173
              +       +                +   +  D +ES  + +  +    + +     
Sbjct: 153 LRILLRLSEFETSGARTLSRTSRFGTSFKALGRLLDTLESFKEELEPIGVGYHLDTTGLD 212

Query: 174 CFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKD---FCQRLKEFSEKYSV 227
             +  L+                  + +GGG   +   +  +         +    K++ 
Sbjct: 213 EKATALEGCLIAVEELRLRGFGPRAVDVGGGFGISYLAHADQWERYTSALTQAVLGKHTP 272

Query: 228 QIYLEPG 234
             +   G
Sbjct: 273 MTWGGHG 279


>gi|301792365|ref|XP_002931149.1| PREDICTED: LOW QUALITY PROTEIN: ornithine decarboxylase-like
           [Ailuropoda melanoleuca]
          Length = 497

 Score = 59.8 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 34/331 (10%), Positives = 70/331 (21%), Gaps = 32/331 (9%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           + + D   +L       ++  +  V      K   +     TL     G   +S   V L
Sbjct: 85  FNVADLGDILKT--HLRWLEASPRVTPFY-XKGNDSRTTVKTLPALGTGLDCASKIGVQL 141

Query: 66  GHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   E   Y    +        ++    +  +  +L   +        K+ LRI  
Sbjct: 142 VQSLGVPPERKIYANPRQQASQIKYAASNRIQMMTSGGELELMEVPGAHPKAKLVLRIAT 201

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
             S +   L+              D+      +V G+ F       +             
Sbjct: 202 DDSKAVCGLSVKFGXTLHTSGLLLDRAGERGIDVIGVSFPVGSGCTNPETXCGATPAAPC 261

Query: 185 EFGH--------------------FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
            FG                        ++++  +                       S  
Sbjct: 262 VFGMGAEVAFSLXLLDAGGGFPGSGDGKLKFEEIASVTDPRTSPSGQTQEXDSQPVASAF 321

Query: 225 YSVQIYLEPGEAIVTNTTTLNTT----VLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280
                 +    A   +              ++  +           AH       +    
Sbjct: 322 TLTVNIVXLLRAQTRSDDEEEPREQTFPCYVNGGVDGCSHCILCDHAHXEPLQQKRPKP- 380

Query: 281 IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP 311
                  Y+    G +C + D   E      
Sbjct: 381 ---GEKYYSTSAQGPTCASLDRVVERRDLPE 408


>gi|296164218|ref|ZP_06846812.1| orn/DAP/Arg decarboxylase 2 [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295900424|gb|EFG79836.1| orn/DAP/Arg decarboxylase 2 [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 302

 Score = 59.8 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 48/125 (38%), Gaps = 6/125 (4%)

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMV 292
           P +           TVL +S ++        S E      L  QE++      GP    V
Sbjct: 171 PVQGFKRRGDYGIITVLGLSMSLSEQW---KSSEFLPDPTLWPQEASDELQPAGPVRCCV 227

Query: 293 CGRSCLAGDIF--GEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPTIAVKNVDG 349
            G SCL  D+    +    +  + GD + + + AGY +++  + F+G+ +P       D 
Sbjct: 228 GGASCLDYDMLTWRKVKLPRQPRYGDLLIYPNTAGYQMDKNESEFHGLPLPPKLEVTRDD 287

Query: 350 TIKAI 354
             +  
Sbjct: 288 EGRLR 292


>gi|23397086|gb|AAN31828.1| putative arginine decarboxylase SPE2 [Arabidopsis thaliana]
          Length = 711

 Score = 59.8 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/237 (13%), Positives = 69/237 (29%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +     L N L+                +  + +  +KC     + + + ++     
Sbjct: 107 PLIVRFPDVLKNRLECLQSAFDYAIKSQGYDSHYQGVYPVKCNQDRFVVEDIVKFGSSFR 166

Query: 54  -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
            G  + S  E++L          +       +KD E  ++            I+     +
Sbjct: 167 FGLEAGSKPEILLAMSCLCKGSPDAFLVCNGFKDAEYISLALLGRKLALNTVIVLEQEEE 226

Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   + +QK++ +   GLR      +S    +       + G      +          
Sbjct: 227 LDLVIELSQKMNVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQIVRVVRKLRQSG 285

Query: 156 --KNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207
               +  L FH   +  S        A    +  E       ++ I +GGG+     
Sbjct: 286 MLDCLQLLHFHIGSQIPSTSLLSDGVAEAAQLYCELVRLGAHMKVIDIGGGLGIDYD 342


>gi|15236176|ref|NP_195197.1| ADC2 (ARGININE DECARBOXYLASE 2); arginine decarboxylase
           [Arabidopsis thaliana]
 gi|42573175|ref|NP_974684.1| ADC2 (ARGININE DECARBOXYLASE 2); arginine decarboxylase
           [Arabidopsis thaliana]
 gi|12229960|sp|O23141|SPE2_ARATH RecName: Full=Arginine decarboxylase 2; Short=ADC 2; Short=ARGDC 2;
           AltName: Full=ADC-N
 gi|2271485|gb|AAB72179.1| arginine decarboxylase [Arabidopsis thaliana]
 gi|3096940|emb|CAA18850.1| arginine decarboxylase SPE2 [Arabidopsis thaliana]
 gi|7270422|emb|CAB80188.1| arginine decarboxylase SPE2 [Arabidopsis thaliana]
 gi|14517492|gb|AAK62636.1| AT4g34710/T4L20_290 [Arabidopsis thaliana]
 gi|20334764|gb|AAM16243.1| AT4g34710/T4L20_290 [Arabidopsis thaliana]
 gi|332661013|gb|AEE86413.1| arginine decarboxylase 2 [Arabidopsis thaliana]
 gi|332661014|gb|AEE86414.1| arginine decarboxylase 2 [Arabidopsis thaliana]
          Length = 711

 Score = 59.8 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/237 (13%), Positives = 69/237 (29%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +     L N L+                +  + +  +KC     + + + ++     
Sbjct: 107 PLIVRFPDVLKNRLECLQSAFDYAIKSQGYDSHYQGVYPVKCNQDRFVVEDIVKFGSSFR 166

Query: 54  -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
            G  + S  E++L          +       +KD E  ++            I+     +
Sbjct: 167 FGLEAGSKPEILLAMSCLCKGSPDAFLVCNGFKDAEYISLALLGRKLALNTVIVLEQEEE 226

Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   + +QK++ +   GLR      +S    +       + G      +          
Sbjct: 227 LDLVIELSQKMNVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQIVRVVRKLRQSG 285

Query: 156 --KNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207
               +  L FH   +  S        A    +  E       ++ I +GGG+     
Sbjct: 286 MLDCLQLLHFHIGSQIPSTSLLSDGVAEAAQLYCELVRLGAHMKVIDIGGGLGIDYD 342


>gi|268591781|ref|ZP_06126002.1| arginine 2-monooxygenase [Providencia rettgeri DSM 1131]
 gi|291312743|gb|EFE53196.1| arginine 2-monooxygenase [Providencia rettgeri DSM 1131]
          Length = 634

 Score = 59.8 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/250 (14%), Positives = 77/250 (30%), Gaps = 26/250 (10%)

Query: 13  KLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM--DGTTSSSLYEVMLG 66
           +L +        R++ G K    L+  +K      + ++L       G  + S  E+M  
Sbjct: 75  RLRSINAAFRRARESYGYKGDYFLVYPIKVNQQRRVIESLVNSGEPLGLEAGSKAELMAV 134

Query: 67  HEKFGG-ETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
               G  +T      YKD E          L +   ++   +S++     +A+ L+    
Sbjct: 135 LANAGKTQTVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIEMVLAEAESLNVTPR 194

Query: 120 LRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNVNGLMFHNNCE-- 168
           L +   ++         +     + G      ++            ++  L FH   +  
Sbjct: 195 LGVRARLASQGSGKWQASGGEKSKFGLAATQVLQLVEILRNANRLDSLQLLHFHLGSQMA 254

Query: 169 -NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
             +              E       I+   +GGG+    +    +  C  +     +Y+ 
Sbjct: 255 NIRDIATGVRESARFYVELHRLGVNIQCFDVGGGLGVDYEGTRSQSDCS-VNYGLNEYAN 313

Query: 228 QIYLEPGEAI 237
            +    G+A 
Sbjct: 314 NVIWAIGDAC 323


>gi|325281202|ref|YP_004253744.1| Biosynthetic arginine decarboxylase [Odoribacter splanchnicus DSM
           20712]
 gi|324313011|gb|ADY33564.1| Biosynthetic arginine decarboxylase [Odoribacter splanchnicus DSM
           20712]
          Length = 629

 Score = 59.8 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 30/264 (11%), Positives = 74/264 (28%), Gaps = 32/264 (12%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVK--------LLLALKCFAAWGMFDTLNQYM---- 52
           P  L     L N ++      + A  +        ++  +K      + + +  +     
Sbjct: 59  PVLLRFPDILDNRIEKISNCFQAAAREYGYSAKNFIIYPIKVNQMRPVVEEIVSHGNKFN 118

Query: 53  DGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLN 105
            G  + S  E+          E       YKD            +     ++   + +L 
Sbjct: 119 IGLEAGSKPELHAVLSIDIDDEAMIICNGYKDESYIELALLAQKMGKRIFLVVEKLMELK 178

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-SRLGEKCKDKIESEI--------K 156
                A+K++ K  + I   ++ S     + +    S+ G    + +++           
Sbjct: 179 TIARLAKKMNVKPNIGIRIKLASSGSGKWEESGGDVSKFGVNSSELLDALDILEKNKMAD 238

Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213
           ++  + FH   +    +              E       I ++ +GGG+           
Sbjct: 239 SLQLIHFHIGSQVTNIRRIKTALKEASQFYVELKRMGYNINFVDIGGGLGVDYDG-TRSA 297

Query: 214 FCQRLKEFSEKYSVQIYLEPGEAI 237
               +    ++Y         +A 
Sbjct: 298 TSNSMNYSIQEYVNDAVSSIVDAC 321


>gi|90021245|ref|YP_527072.1| arginine decarboxylase [Saccharophagus degradans 2-40]
 gi|89950845|gb|ABD80860.1| arginine decarboxylase [Saccharophagus degradans 2-40]
          Length = 639

 Score = 59.4 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 38/312 (12%), Positives = 86/312 (27%), Gaps = 48/312 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQ----YM 52
           P  +  +  L   +         A          + +  +K      + + + +    Y 
Sbjct: 66  PVLIRFEDLLEEQIGRLNNAFTTAIKASNYQGQYRGVFPIKVNQQCHVIEEIAEVGAKYG 125

Query: 53  DGTTSSSLYEVMLGHEKFGG-ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLN------ 105
            G  + S  E+++        +       YKD E   +      + +     +       
Sbjct: 126 HGLEAGSKPELIIALAHLESQDACIVCNGYKDAEFIDLGLQACKMGYKCFFVIETPSELP 185

Query: 106 KFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEI--------K 156
              ++++KL  K  + +     S         +   S  G      IE            
Sbjct: 186 IIIERSRKLGIKPMIGVRVKLASMVGGHWNATSGDRSIFGLSIAQLIEMVDTLKAEGMLD 245

Query: 157 NVNGLMFHNNCENKSFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDK------ 207
            +  L +H   +  +     +      ++  E       + ++ LGGG+           
Sbjct: 246 CLKLLHYHLGSQIPNIRDIRSGVLEACHVYNELVKEGAAMGYLDLGGGLAVDYDGSKSNY 305

Query: 208 --------DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                   D    D    +    +        I  E G A +  ++ L   VLD+++   
Sbjct: 306 IHSKNYTLDEYCTDIVDVIISTLDPQGVEHPTIITESGRATIAYSSVLVFNVLDVAKFEP 365

Query: 257 NLVIVDSSVEAH 268
              + +   + H
Sbjct: 366 ASPVDEVQEDEH 377


>gi|118581018|ref|YP_902268.1| arginine decarboxylase [Pelobacter propionicus DSM 2379]
 gi|166979640|sp|A1AS90|SPEA_PELPD RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|118503728|gb|ABL00211.1| arginine decarboxylase [Pelobacter propionicus DSM 2379]
          Length = 635

 Score = 59.4 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 39/297 (13%), Positives = 81/297 (27%), Gaps = 48/297 (16%)

Query: 12  QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
             L   + +   + +NA          +    +K      + + +  +      G    S
Sbjct: 67  NILEGRIASINRVFRNAIQTNNYPAQYQTFYPIKVNQQRQVVEAIANFGKKYNIGLEVGS 126

Query: 60  LYEVMLGHEKFGGETH-AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK------DKAQ 112
             E++         +       YKD E    +     I +N    + K        + ++
Sbjct: 127 KPELVAAISISTNNSLPIICNGYKDTEFIETVLYATKIGYNITIVIEKLFELEKVIELSR 186

Query: 113 KLHKKIGLRINPSVSYSKFILA-DPNRPFSRLGEKCKDKIES--------EIKNVNGLMF 163
           K      L I   +S              ++ G +  + I +         I +V  L  
Sbjct: 187 KTGITPKLGIRVKLSSKGTGKWATSGGEDAKFGLRISEIITAIDLLKQYNLIDSVKLLHS 246

Query: 164 HNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------------- 207
           H   +                I  E       +E+I +GGG+                  
Sbjct: 247 HIGSQVTKIDKIKNALIEGARIYVEMKKLGVNLEYIDIGGGLGVDYDGSKSSYFSSVNYS 306

Query: 208 ----DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVI 260
                  V    + + + +      I  E G A V + + + T +L+ +   +    
Sbjct: 307 VEEYANDVIYQIKNICDEAGVDCPNIISESGRATVAHYSVMVTNILNTNTQNQMPDF 363


>gi|6715490|gb|AAF26434.1| arginine decarboxylase [Brassica juncea]
          Length = 692

 Score = 59.4 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 32/237 (13%), Positives = 69/237 (29%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L+                +  + +  +KC     + + + ++  G  
Sbjct: 96  PVIVRFPDVLKNRLECLQSAFDLAVQSQGYGSHYQGVYPVKCNQDRFIVEDIVKFGSGFR 155

Query: 56  ---TSSSLYEVMLGHEKFGG---ETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L          E       +KD E  ++            I+     +
Sbjct: 156 FGLEAGSKPEILLAMSCLSKGNREAFLVCNGFKDVEYISLALLGRKLALNTVIVLEQEEE 215

Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK----- 156
           L+   D ++K++ +   GLR      +S    +       + G      +    +     
Sbjct: 216 LDLVIDLSRKMNVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTGQIVRVVRRLRESC 274

Query: 157 ---NVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207
               +  L FH   +  S             +  E       ++ I +GGG+     
Sbjct: 275 MLDCLQLLHFHIGSQIPSTALLSDGVGEAAQLYCELVRLGADMKVIDVGGGLGIDYD 331


>gi|86604858|ref|YP_473621.1| arginine decarboxylase [Synechococcus sp. JA-3-3Ab]
 gi|86553400|gb|ABC98358.1| arginine decarboxylase [Synechococcus sp. JA-3-3Ab]
          Length = 641

 Score = 59.4 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 22/223 (9%), Positives = 59/223 (26%), Gaps = 27/223 (12%)

Query: 12  QKLLNNLDTALYIRKNAGV----KLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEV 63
            ++    ++     +  G     + +  +K      + + + ++      G  + S  E+
Sbjct: 78  DRMRRICESFQQAIERFGYPNVYRGVYPVKVNQQRHLVEEVVKHGRAYHFGLEAGSKPEL 137

Query: 64  MLGHEKFG-GETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLNKFKDKAQKLHK 116
           ++                YKD +                I+   + +L      A+ L  
Sbjct: 138 LIALALLDTPGALLICNGYKDRDFMETALLAQRLGRTPIIVLERLQELELVLQAAEHLGI 197

Query: 117 KIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNVNGLMFHNNC 167
              L +   +S         +     + G    + ++             +  L +H   
Sbjct: 198 DPLLGVRAKLSAQGSGRWGTSAGDRGKFGLTATEMLQVVERLREVGKLHCLRLLHYHIGS 257

Query: 168 ENKSFLCF---SAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207
           +                I  E       + ++ +GGG+     
Sbjct: 258 QISMVSVHGRAVREASQIYIELVKLGAPMGYLDVGGGLGVDYD 300


>gi|183599929|ref|ZP_02961422.1| hypothetical protein PROSTU_03449 [Providencia stuartii ATCC 25827]
 gi|188022203|gb|EDU60243.1| hypothetical protein PROSTU_03449 [Providencia stuartii ATCC 25827]
          Length = 634

 Score = 59.4 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 76/262 (29%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     + A           L+  +K      + ++L       G
Sbjct: 63  PALFCFPQILQHRLRSINAAFRRARESYGYTGDYFLVYPIKVNQQRRVIESLVNSGEPLG 122

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L +          N       I        L +   ++   +S++   
Sbjct: 123 LEAGSKAELMAVLANAGRTRTVIVCNGYKDREYIRLALIGEKLGHKVYLVIEKMSEIEVV 182

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
             +A+ L+    L +   ++         +     + G      ++           +++
Sbjct: 183 LKEAESLNVTPRLGVRARLASQGSGKWQASGGEKSKFGLAATQVLQLVEILRQAGRLESL 242

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E      +I+   +GGG+    +    +  C
Sbjct: 243 QLLHFHLGSQMANIRDIATGVRESARFYVELHRLGVKIQCFDVGGGLGVDYEGTRSQSDC 302

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  +    G+A 
Sbjct: 303 S-VNYGLNEYANNVIWAIGDAC 323


>gi|114777251|ref|ZP_01452262.1| arginine decarboxylase [Mariprofundus ferrooxydans PV-1]
 gi|114552396|gb|EAU54879.1| arginine decarboxylase [Mariprofundus ferrooxydans PV-1]
          Length = 634

 Score = 59.4 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 36/318 (11%), Positives = 88/318 (27%), Gaps = 41/318 (12%)

Query: 12  QKLLNNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLG 66
            ++      A    +  G    +  +K      + + + ++      G  + S  E+   
Sbjct: 74  AQIHQRFAIAREEAEYEGRYFGVYPIKVNQQRQVVEEIVEFGTEYNWGLEAGSKPELHAT 133

Query: 67  HEKF-GGETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLNKFKDKAQKLHKKIG 119
                  E       YKD E   +            I+    ++L+   + +++L  +  
Sbjct: 134 LAMLEDVEGLIVCNGYKDREFIELAMIGCKMGKRVFIVVEKPNELDMIMEASRRLGVEPL 193

Query: 120 LRINPSVSYSKFILADPNRPF-SRLGEKCKDKI--------ESEIKNVNGLMFHNNCE-- 168
           + +   +  +     + +    S+ G    + +         + +  +  L FH   +  
Sbjct: 194 IGLRCRLVATSQGKWEDSGGDSSKFGLAATELMDVVRKLRENNMLSALRLLHFHIGSQVP 253

Query: 169 -NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK-----------------DYP 210
             +              E       IE++ +GGG+                         
Sbjct: 254 RIRHIKQAMQEAARFYVELRKLGAPIEFMDVGGGLGVNYDGSISGTQTSVDYSLQEYAND 313

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP 270
           +    + +          I  E G A+V +   L   VL I+     + + +    A + 
Sbjct: 314 IVWTLKAVCNEEGLPHPHIISESGRALVAHHAVLVIDVLGITRRTSRVSVDEPDENAPLQ 373

Query: 271 DYLLYQESATIYPNTGPY 288
              ++   A         
Sbjct: 374 LRQMWDTWADFDCIEPRE 391


>gi|223937508|ref|ZP_03629412.1| arginine decarboxylase [bacterium Ellin514]
 gi|223893859|gb|EEF60316.1| arginine decarboxylase [bacterium Ellin514]
          Length = 646

 Score = 59.4 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/312 (11%), Positives = 87/312 (27%), Gaps = 48/312 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52
           P  +  +  L N +++     +N+          + +  +K      + + + +      
Sbjct: 67  PVLIRFQDILRNRVESINTAFRNSITEFNYQGSYRGVFPIKVNQLREVVEEILEAGKPFN 126

Query: 53  DGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNC-----DTIIFNTVSQLN 105
            G    S  E+   L  +   G     N       I   +          ++   + +L 
Sbjct: 127 FGLEVGSKPELFAGLALQNQIGSLIICNGYKDAGFIKMAILGQKLGKKVIMVVEKLEELR 186

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPN-RPFSRLGEKCKDKIES--------EIK 156
           +    +++L  +  + I   +          +    ++ G    + + +          +
Sbjct: 187 QIITISKQLGVEPSVGIRARLHSKGAGKWAESGGENAKFGLSTSELLAATEMLKSEGLGQ 246

Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------ 207
               L FH   +     +             +       IE++ +GGG+           
Sbjct: 247 CFKLLHFHIGSQVPDILTVKKAVQEASRFYAKLFKMGFNIEYMDVGGGLGVDYDGSRSAF 306

Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                         +  +   +    +     I  E G AIV + + L   V    E I+
Sbjct: 307 DSSTNYTLQEYTNDIVYYVGDVCNAEKVPHPHIISESGRAIVAHHSMLVVEVFGAIEKIR 366

Query: 257 NLVIVDSSVEAH 268
           +   +  +   H
Sbjct: 367 SGNGIHYTENEH 378


>gi|158145243|gb|ABW21853.1| putative arginine decarboxylase [Solanum chilense]
          Length = 448

 Score = 59.4 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +     L N L++               A  + +  +KC     + + + ++     
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSDFR 125

Query: 54  -GTTSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
            G  + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+  +   GLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMEVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301


>gi|115446149|ref|NP_001046854.1| Os02g0482400 [Oryza sativa Japonica Group]
 gi|47848622|dbj|BAD22471.1| putative ornithine decarboxylase [Oryza sativa Japonica Group]
 gi|113536385|dbj|BAF08768.1| Os02g0482400 [Oryza sativa Japonica Group]
          Length = 457

 Score = 59.4 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 47/167 (28%), Gaps = 7/167 (4%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           + +ID  ++           +  GV+   A+KC     +   L     G   +S  E+  
Sbjct: 63  FNVIDLGEVARLFAAWWRGLR--GVRPYYAVKCNPNPALLGALAGLGAGFDCASRAEMEA 120

Query: 66  GHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                   +   Y      +     A     D   F++  ++ K K         + ++ 
Sbjct: 121 VLALGVAADRVVYANPCKLEPHLEYAAGVGVDLTTFDSEEEVGKIKRCHPGCRLLLRIKA 180

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN--VNGLMFHNNC 167
                    +L    +  +   E       +      V G+ FH   
Sbjct: 181 PDGDDGGGAMLNLGTKYGAHRDEVVPLLAAARRAGMAVVGVSFHVGS 227


>gi|304312431|ref|YP_003812029.1| Arginine decarboxylase [gamma proteobacterium HdN1]
 gi|301798164|emb|CBL46386.1| Arginine decarboxylase [gamma proteobacterium HdN1]
          Length = 633

 Score = 59.4 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 87/304 (28%), Gaps = 46/304 (15%)

Query: 12  QKLLNNLDTALYIRKNAGV----KLLLALKCFAAWGMFDTLN-------QYMDGTTSSSL 60
            ++            +        L+  +K      +   +        +   G  + S 
Sbjct: 70  DRVRRLCKAFSESMADLDYNGSYTLVYPIKVNQQQSVVQEIVNTKVDIPRCSAGLEAGSK 129

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNKFKDKAQKL 114
            E+M         +      YKD E                I+   +S+L    ++A+++
Sbjct: 130 PELMAVLAMAREGSTIVCNGYKDREYIRLALIGEKTGRKVYIVVEKLSELQLILEEAEEM 189

Query: 115 HKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHN 165
                + +     S+ K    +     S+ G      I+             +  L FH 
Sbjct: 190 QVTPRIGLRTRLNSHGKGNWQNTGGEKSKFGLAATQIIKVLAVLRASGKLDCLQLLHFHL 249

Query: 166 NCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK--------------D 208
             +  +     A +K   + F         ++ I +GGG+    +              +
Sbjct: 250 GSQISNIRDIQAGMKEAARYFSELRLAGAGVQCIDVGGGLGVDYEGTRSRSNCSMNYSME 309

Query: 209 YPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSV 265
                  Q L+   +++      I+ E G A+  +   L + V+          I   S 
Sbjct: 310 EYAYAIVQALRNTCDEHDLDMPDIFTESGRAVTAHHAVLVSNVIGCESPFSGGAIAAPSP 369

Query: 266 EAHV 269
           +A +
Sbjct: 370 DASM 373


>gi|239996379|ref|ZP_04716903.1| arginine decarboxylase [Alteromonas macleodii ATCC 27126]
          Length = 636

 Score = 59.4 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/313 (9%), Positives = 94/313 (30%), Gaps = 48/313 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L + +       +++          + +  +K      + + +        
Sbjct: 61  PVVVRFHDILRSQVAGLNKAFRSSIEEAEYQGQYQGVYPVKVNQMREVVEEIVDAGKPFN 120

Query: 53  DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105
            G  + S  E++         E+      YKD E+  +      +      +    ++L 
Sbjct: 121 YGLEAGSKAELLTVLAMNTNEESLTILNGYKDDEVMRLALLGRKLGRRVVVVVEKYTELL 180

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------K 156
                A++L     + +   ++       + +     + G    + I +           
Sbjct: 181 LLVKIAKELDIDPIIGVRSKMTVKGRGKWESSGGERAKFGLTITEIINAARYLEEQGMAH 240

Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------ 207
            +  L FH   +    ++          I  +      +++++ +GGG+           
Sbjct: 241 CLKLLHFHIGSQLTDIRAVKEAVTEGARIYADLHKMGFELDYVDVGGGLGIDYDGSNSTN 300

Query: 208 ----DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
               +Y ++++   +    ++           +  E G AI  + + + T ++   ++  
Sbjct: 301 ESSRNYSMQEYVADVVYGMKEMCDLEGVPHPHLVSESGRAITAHHSCVITEIVGEIKSNA 360

Query: 257 NLVIVDSSVEAHV 269
           + +   +    H 
Sbjct: 361 SQMDTSAKAGEHF 373


>gi|73808442|gb|AAZ85221.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|73808444|gb|AAZ85222.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|73808454|gb|AAZ85227.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|73808456|gb|AAZ85228.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|73808458|gb|AAZ85229.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|73808460|gb|AAZ85230.1| arginine decarboxylase [Solanum pimpinellifolium]
          Length = 448

 Score = 59.4 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 72/237 (30%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +     L N L++               A  + +  +KC     + + + ++     
Sbjct: 66  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGLR 125

Query: 54  -GTTSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
            G  + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 126 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 185

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+     IGLR      +S    +       + G      +          
Sbjct: 186 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVRKLKESG 244

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
               +  L FH   +  S    +  +    + +         +++I +GGG+     
Sbjct: 245 MLDCLQLLHFHIGSQIPSTELLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYD 301


>gi|192358903|ref|YP_001981997.1| arginine decarboxylase [Cellvibrio japonicus Ueda107]
 gi|190685068|gb|ACE82746.1| arginine decarboxylase [Cellvibrio japonicus Ueda107]
          Length = 640

 Score = 59.0 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 86/306 (28%), Gaps = 48/306 (15%)

Query: 11  KQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM----DGTTSS 58
           +  +   + T       A          +    +K      +   + ++      G  + 
Sbjct: 74  ENLVDKRISTLNDSFALAIEASGYQGQYRGAFPIKVNQQSHVIAEIARFGERYNHGLEAG 133

Query: 59  SLYEVMLGHEKFGG-ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
           S  E+M+        E+      YKD E   +      + F     +    +    + + 
Sbjct: 134 SKAELMIALATLKNRESLIICNGYKDPEFITLGLQARKLGFKCFFVVETLAELPHIIERS 193

Query: 118 IGLRINPSVSYS-------KFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLM 162
             L I P +          +   ++ +   S  G    + I         + +     L 
Sbjct: 194 QALGIEPLIGVRLKLSTKVEGHWSEDSGDRSLFGLNTNELITVVDELRKANLLHCFQLLH 253

Query: 163 FHNNCENKSFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDK------------ 207
           FH   +  +     A          E       + +I LGGG+                 
Sbjct: 254 FHLGSQIPNIRSIRAGVLEACRYYIELVAEGAPLGYIDLGGGLAIDYDGTSSTSGHSRNY 313

Query: 208 --DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD 262
                  D  + ++E  +++      I  E G A V +T  L   +LD++       + +
Sbjct: 314 SVQEYCIDVVEAIQECLDEHQIVHPTIVTESGRATVAHTAVLLFNILDVTHFEPTEPLGE 373

Query: 263 SSVEAH 268
              + H
Sbjct: 374 LPQDCH 379


>gi|170047366|ref|XP_001851194.1| ornithine decarboxylase [Culex quinquefasciatus]
 gi|167869851|gb|EDS33234.1| ornithine decarboxylase [Culex quinquefasciatus]
          Length = 430

 Score = 59.0 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/333 (12%), Positives = 90/333 (27%), Gaps = 40/333 (12%)

Query: 19  DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE--KFGGETHA 76
               ++R    V+    +       +  T      G   SS  EV+   E     G    
Sbjct: 50  RHYDWLRNLPRVRPYYTVGSNDDVRIIGTTALLDCGYVCSSKAEVLKVLEFRVDPGVVLL 109

Query: 77  YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADP 136
             V      +         ++F++  +L        +    I  R++             
Sbjct: 110 ERVGGNAELLRFARRKDVRVVFDSEEELRMIHQYFPEAEVLIRFRLSED----------- 158

Query: 137 NRPFSRLGEKCKDKIE---SEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FI 190
            +P  +   + +D +        +V G  F+          F   +    +   H     
Sbjct: 159 VQPGCQADGEARDLLNLAKELNMDVIGWCFNAGSSCCDPAIFYTAISKGREITDHATIVG 218

Query: 191 TQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD 250
              ++I+LG G+    KD   + +   +    E Y  +       A V +  +       
Sbjct: 219 FNFKFINLGVGV-CGQKDVQGQRYASYINRALEDYFPERRGWTIAAEVGSFHSAAAVTAI 277

Query: 251 ISENIKNLVIVDSSVEAHVPDYLLY------QESATIYPNTGPYTAMV------CGRSC- 297
            +   K +          +     Y      + S ++   + P   +V      CG  C 
Sbjct: 278 TAIRGKRIFWNQRHPSR-IDQVFYYVSGRVERTSHSLIHASDPVCPIVWKDRDECGVECR 336

Query: 298 ------LAGDIFGEFHFEKPVKIGDRISFEDVA 324
                  + +   +      +   D + FE   
Sbjct: 337 TTLYEAGSDECICKDLLLPELNENDFMVFESQG 369


>gi|226355284|ref|YP_002785024.1| arginine decarboxylase [Deinococcus deserti VCD115]
 gi|226317274|gb|ACO45270.1| putative arginine decarboxylase [Deinococcus deserti VCD115]
          Length = 640

 Score = 59.0 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/286 (11%), Positives = 85/286 (29%), Gaps = 48/286 (16%)

Query: 14  LLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM----DGTTSSSLY 61
           L   +     +   A          + +  +K      + +T+         G  + S  
Sbjct: 72  LAGRVKHLNEVFGQAIAEYGYTRHYQGVFPIKVNQRRAVVETVASAGYDYAHGLEAGSKA 131

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCE------IDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114
           E+ L    +   +       +KD            L     I     S+L++   +A+ L
Sbjct: 132 ELALCLAQRMHPDALLCCNGFKDDGFIKLALWGRTLGKNVVITIEKFSELDRILKQAKAL 191

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIKNVNGLMFHN 165
             +  + +   +        + +     + G    + +           I ++  L  H 
Sbjct: 192 GVRPAIGVRFKLHARGSGQWEESGGDQAKFGLNAYELLRVVERLKEEGMIDSLVMLHTHI 251

Query: 166 NCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDK----------DYPVK 212
             +          ++   + +        +++++++GGG+               +Y VK
Sbjct: 252 GSQITDIRRVKVAVREATQTYAGLIAAGAELKYLNVGGGLGVDYDGSKTTFYASMNYTVK 311

Query: 213 DFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDI 251
           ++   +    ++           I  E G A+  +   L   V+D+
Sbjct: 312 EYAADVVYTIQETCKARGVPEPIIISESGRALTAHHAVLILPVIDV 357


>gi|332663150|ref|YP_004445938.1| Orn/DAP/Arg decarboxylase 2 [Haliscomenobacter hydrossis DSM 1100]
 gi|332331964|gb|AEE49065.1| Orn/DAP/Arg decarboxylase 2 [Haliscomenobacter hydrossis DSM 1100]
          Length = 469

 Score = 59.0 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/395 (10%), Positives = 106/395 (26%), Gaps = 51/395 (12%)

Query: 12  QKLLNNLDTALYIRKNAGV----KLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH 67
            ++    +      K+       +     K      + + + ++     +SS +++ L  
Sbjct: 58  AQIKKARNLFTRAMKSLNYNGKYQYCYCTKSNHFSYILEEVIKHDVQLETSSAFDIDLIR 117

Query: 68  E-----KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNT----VSQLNKFKDKAQKLHKKI 118
           +                 +K       + +     F         + + +   Q +    
Sbjct: 118 KLYKKGLIDKNITVVCNGFKPDHYKQRIVDLIHDGFENVIPVCDNIQEIEYYEQHIQGVC 177

Query: 119 GLRINPSVSYSKFILADPNRPFSR----LGEKCKDKIESEIKNVNGLMFHNNCENK---S 171
            + I  +           +R   R    L    +    +    +  L F  +   K    
Sbjct: 178 KIGIRVATEEEPNFEFYTSRLGIRNSDVLPFFNEKIKNNPKFKLTLLHFFVDTGIKDSLY 237

Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---DYPVKDFCQRL-------KEF 221
           +         +          +  +++GGG+   +    ++  K   + +        + 
Sbjct: 238 YWGELRKAVRLYAHLRRESEDLGILNIGGGMPIRNSLGFEFDYKYMIKEIVKTILQACQK 297

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK--NLVIVDSSVEAHVPDYLLYQES- 278
            +     ++ E G+  V  +     +VL   +        ++D+S+   +PD     E  
Sbjct: 298 EQIPEPDLFTEFGKYTVGESGAALFSVLAQKQQNDAERWYMIDNSLMTTLPDVWGIGERF 357

Query: 279 ---ATIYPNTGPYTAMVCGRSCLAGDIFGEF-----HFEKPVKIGD----RISFEDVAGY 326
                           + G SC   D +         +    + G+     + F     Y
Sbjct: 358 ILLPINKWYNEYQRVNIGGLSCDNSDYYNAEVNQAQVYLPTFENGEPEPLFLGFFHTGAY 417

Query: 327 NINRKNWFNGINM-----PTIAVKNVDGTIKAIRE 356
             ++ + + GI       P   +   D     +  
Sbjct: 418 Q-DQISGYGGIKHCLIPSPKHVLIYKDPQGNIVDR 451


>gi|332533231|ref|ZP_08409098.1| biosynthetic arginine decarboxylase [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332037310|gb|EGI73765.1| biosynthetic arginine decarboxylase [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 626

 Score = 59.0 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/308 (13%), Positives = 83/308 (26%), Gaps = 46/308 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMF-DTLN--QYMD 53
           P  +     L N +DT       A            +  +K      +    L     + 
Sbjct: 60  PVLVRFTDILKNRVDTLTNAFTQARANREYNGKYTCVYPIKVNQQRSVVSKLLAHPSGLV 119

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
           G  + S  E+M                YKD E   +      +  +    + K  +    
Sbjct: 120 GLEAGSKPELMAILGVAKEPITIVCNGYKDSEFLRLACIGQAMGHSVKIVVEKLSELTTL 179

Query: 114 LHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNV 158
           L +   L I P+        S  K    +      + G      + +            +
Sbjct: 180 LEEIDNLGIEPAIGIRIRLNSVGKGKWQNTGGEKGKFGLTAGQVLSAVEVLKKHNKLHLM 239

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207
             + FH   +  +       L+   + F         +  + +GGG+    +        
Sbjct: 240 QMVHFHIGSQIANIRDIHRALRECARHFAELTQLNVPLNTVDVGGGLGVDYEGSGSRSAC 299

Query: 208 ------DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
                 +   ++      E  +++      I  E G A+  +   L T V+D+ +   +L
Sbjct: 300 SMNYTVEEYARNVVNAFAEVCDQHNLTHPAIITESGRALTAHHAVLITDVIDVEKAPNHL 359

Query: 259 VIVDSSVE 266
                   
Sbjct: 360 NPEPPLEN 367


>gi|170049411|ref|XP_001855912.1| ornithine decarboxylase [Culex quinquefasciatus]
 gi|167871259|gb|EDS34642.1| ornithine decarboxylase [Culex quinquefasciatus]
          Length = 69

 Score = 59.0 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 309 EKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAI 354
              ++I D + FE++  Y I   + FNG  +P I       T + +
Sbjct: 1   MPELQIDDWVVFENMGAYTIPVASPFNGFPLPKIYCYISKDTWEML 46


>gi|325282835|ref|YP_004255376.1| Biosynthetic arginine decarboxylase [Deinococcus proteolyticus MRP]
 gi|324314644|gb|ADY25759.1| Biosynthetic arginine decarboxylase [Deinococcus proteolyticus MRP]
          Length = 706

 Score = 59.0 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/280 (13%), Positives = 78/280 (27%), Gaps = 43/280 (15%)

Query: 12  QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLGH 67
           +   + +    Y     GV     +K      + + + Q       G  + S  E+ L  
Sbjct: 95  EAFRSAIKEYDYAGGYQGV---FPIKVNQRRAVVEEVAQAGYEYAHGLEAGSKAELALCL 151

Query: 68  E-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK------AQKLHKKIGL 120
             K   E       +KD     +     T+  N V  + KF +       A+ L  +   
Sbjct: 152 AQKMHPEALLSCNGFKDDGFIKLALWGRTLGKNVVITIEKFSELDRTLKQAKALGVRPAF 211

Query: 121 RINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNVNGLMFHNNCENKS 171
            +   +        + +     + G    + +           +  +  L  H   +   
Sbjct: 212 GVRFKLHARGSGQWEESGGDQAKFGLNAYELLRVVERLKEEDMLDTLVMLHTHIGSQITD 271

Query: 172 FLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDK-----------------DYPV 211
                  ++   + +        Q+++++LGGG+                         V
Sbjct: 272 IRRVKVAVREATQTYAGLIAAGAQLKYLNLGGGLAVDYDGSKTTFYASMNYTLAEYAADV 331

Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251
               Q +          I  E G A+  +   L   V+D+
Sbjct: 332 VYTAQEVCRARGVPEPTIVTESGRALTAHHAVLVIPVVDV 371



 Score = 38.2 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 41/170 (24%), Gaps = 29/170 (17%)

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATI----- 281
               L+    +V N   +     D+   + +  I + S+   +PD         I     
Sbjct: 442 FHAILKKVAKLVRNEKYVPDEFEDLQSILADQYICNFSLFQSLPDNWAIDALFPIVPLDR 501

Query: 282 YPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK-------IGD---RISFEDVAGYNINRK 331
                   A +   +C +     +F   + VK        GD    +       Y     
Sbjct: 502 LDQKPTRQATLVDITCDSDGKIEKFIDLRDVKTTLPVHEPGDQPYYLGVFLAGAYQDVLG 561

Query: 332 NWFNGINMPTIA--------------VKNVDGTIKAIREFSYNDYYNNLS 367
           N  N     + A                      + I    Y +     S
Sbjct: 562 NAHNLFGKVSEAHVTVTGQGKYDIDLFVRGQKARRMIESMGYEEVMLRDS 611


>gi|25141367|ref|NP_740834.1| hypothetical protein F53F10.2 [Caenorhabditis elegans]
 gi|20198830|gb|AAM15576.1|U97191_3 Hypothetical protein F53F10.2b [Caenorhabditis elegans]
          Length = 263

 Score = 59.0 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 45/163 (27%), Gaps = 7/163 (4%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSLYEV 63
           P++++D   +   L+    +     V+   A+ C A   +   L+  +D     S+  E+
Sbjct: 56  PFFVMDVAAIERRLEALRVMLPR--VRPNYAVACNADPVLARVLSNNIDVNFEVSNTAEL 113

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
            L           +       +            F   S+             +I L + 
Sbjct: 114 ELVSMNVEPSRAVFCSQLMTRKAIKNAVLAGCSTFVVESEKQVTDVMNASPEAEIILAVC 173

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNN 166
              S  +     P        E+  D       NV G+     
Sbjct: 174 LPYSTGEV----PFGCSVDEIEEILDMAHLLGANVTGIYLELG 212


>gi|168701034|ref|ZP_02733311.1| arginine decarboxylase [Gemmata obscuriglobus UQM 2246]
          Length = 645

 Score = 58.6 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/301 (13%), Positives = 83/301 (27%), Gaps = 48/301 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAG--------VKLLLALKCFAAWGMFDTL----NQYM 52
           P  L     L + +       + +            +  +K      + + +      Y 
Sbjct: 70  PLLLRFTDILQHRIGEIAGAFERSRKEYGYAGEYHCVYPIKVNQQRHVVEEVLSFGKDYN 129

Query: 53  DGTTSSSLYEVMLGHEKFGG-ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA 111
            G  + S  E++       G +T      +KD E   ++     I  N +  + KF +  
Sbjct: 130 FGLEAGSKPELLAVLALTNGVDTPIICNGFKDDEFIKMVVMSRKIGKNIIPVVEKFTELE 189

Query: 112 QKLHKKIGLRINPSV-------SYSKFILADPNRPFSRLGEKCKDKIESEIK-------- 156
             +     L +   +       S             S+ G    + +E+           
Sbjct: 190 LIVKYMEELGVRQPIGVRVKLASRGSGRWRGSAGYRSKFGLTLTEVLEAYEFLKSKGLGD 249

Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------ 207
            +    FH   +    +      +    I  E       +++I +GGG+           
Sbjct: 250 CLQMTHFHMGSQVSDIRKVKDALSEAARIYVELCRLGAGLKYIDVGGGLGIDYDGSQTAF 309

Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                         V    + + + +      I  E G A+V   + L   VL  S+  K
Sbjct: 310 ESSMNYTLQEYANDVVYRIKSVCDEAGVPHPAIISESGRALVAYHSVLVFDVLGTSDFDK 369

Query: 257 N 257
            
Sbjct: 370 C 370


>gi|326491615|dbj|BAJ94285.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326527709|dbj|BAK08129.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score = 58.6 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/260 (12%), Positives = 73/260 (28%), Gaps = 34/260 (13%)

Query: 12  QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD----GTTSSS 59
             L + ++T       A          + +  +KC     + + + ++      G  + S
Sbjct: 122 DVLRHRVETLNAAFDYAVRSTGYAGRYQGVYPVKCNQDRYVVEDIVEFGAPFGFGLEAGS 181

Query: 60  LYEVMLGH----EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK-----FKDK 110
             E++L       +   +       YKD E  ++     T+  NTV  L +        +
Sbjct: 182 KPELLLTMSCLVARGSPDALLICNGYKDLEYVSLALIARTMGLNTVIVLEQEEELDIVVE 241

Query: 111 AQKLHKKIGLRINPSVSYSKFILAD--PNRPFSRLGEKCKDKIES--------EIKNVNG 160
           A +      +    +   +K        +    + G      +           +  +  
Sbjct: 242 ASRRLNIRPVVGMRAKLRTKHAGHFGATSGEKGKFGLNAAQILSVVAKLKALGMLDCLQL 301

Query: 161 LMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR 217
           L FH   +  +             I  E       +  I +GGG+          +    
Sbjct: 302 LHFHIGSQIPTTALLADGVGEAAQIYCELARLGAAMRVIDVGGGLGIDYDGTHSAETDMS 361

Query: 218 LKEFSEKYSVQIYLEPGEAI 237
           +    E+Y+  +    G   
Sbjct: 362 VAYSLEEYAAAVVAAVGRVC 381


>gi|301167358|emb|CBW26940.1| putative arginine decarboxylase [Bacteriovorax marinus SJ]
          Length = 635

 Score = 58.6 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/311 (9%), Positives = 84/311 (27%), Gaps = 48/311 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +     L + +     + +              +  +K      + + +        
Sbjct: 62  PAVIRFHDILRSRVRLINKVFRETIEEYDYEGRYYGVYPIKVNQMREVVEEIIDAGLKYD 121

Query: 54  -GTTSSSLYEVMLGHEKFGGETHAYNVA--YKDCEIDAVLSNCD-----TIIFNTVSQLN 105
            G  + S  E++        +     +     D  +   L   +      I+    S++ 
Sbjct: 122 YGLEAGSKPELLAVLAMNDSKKALTILNGYKDDDYMKLALLGREVGRKIIIVIEKFSEIK 181

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILAD-PNRPFSRLGEKCKDKIES--------EIK 156
           K    ++++  +  + +   +S          +   ++ G    + +++           
Sbjct: 182 KIIRLSKEVGVEPLIGLRGKMSVPGCGRWSGSSGERAKFGLSVSEMLQAVELFRANGLGD 241

Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDY---- 209
            +    FH   +      F   +    + +         +E+  +GGG+           
Sbjct: 242 CIKLFHFHIGSQIPEIRSFKEAISEGGRIYAKLVQAGVPLEYFDIGGGLGVDYDGTRTIN 301

Query: 210 -------------PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                         V    +++ +        I  E G A+  + + + T V+   +   
Sbjct: 302 DSSTNYSLSEYVADVIYSLKQICDLEGVTHPNIVTESGRAVTAHHSCVVTNVIGKIDATS 361

Query: 257 NLVIVDSSVEA 267
           +      + E 
Sbjct: 362 DFNTKKVTGEH 372


>gi|332289354|ref|YP_004420206.1| arginine decarboxylase [Gallibacterium anatis UMN179]
 gi|330432250|gb|AEC17309.1| arginine decarboxylase [Gallibacterium anatis UMN179]
          Length = 643

 Score = 58.6 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/266 (13%), Positives = 70/266 (26%), Gaps = 34/266 (12%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM- 52
           + T  +    Q + + L +       A           L+  +K      + ++L     
Sbjct: 71  LPT-LFCF-PQIIQHRLRSINAAFAQARADFGYEGNYFLVYPIKVNQYRRIIESLITSGQ 128

Query: 53  -DGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109
             G  + S  E+M  L H          N  YKD E        + +       + K  +
Sbjct: 129 PLGLEAGSKAELMAVLAHAGQTKTVIVCN-GYKDREYIRFALMGEKLGHKVYLVIEKISE 187

Query: 110 KAQKLHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIESEI------- 155
               L +   L + P         S             S+ G      ++          
Sbjct: 188 IFLVLEEAKKLNVRPRLGVRARLASQGSGKWQSSGGEKSKFGLSASQVLDLVNLLKDQQS 247

Query: 156 -KNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
              +  L FH   +    +              E       I+   +GGG+         
Sbjct: 248 LDCLQLLHFHLGSQLGNIRDVATGVRESARFYIELHRLGVNIQCFDVGGGLGVDYDGNRT 307

Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAI 237
           +  C  +     +Y+  +    G+A 
Sbjct: 308 ESDCS-VNYGLREYAETVVWGIGQAC 332


>gi|309792220|ref|ZP_07686692.1| Orn/DAP/Arg decarboxylase 2 [Oscillochloris trichoides DG6]
 gi|308225761|gb|EFO79517.1| Orn/DAP/Arg decarboxylase 2 [Oscillochloris trichoides DG6]
          Length = 508

 Score = 58.6 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/354 (11%), Positives = 95/354 (26%), Gaps = 39/354 (11%)

Query: 12  QKLLNNLDTALYIRKNAGVKLL-LALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG---- 66
           +++    + A  I +  G  L   A K   A     T         +S+  +VM+     
Sbjct: 68  ERMRTWAEEARQISEYTGTFLYAYATKANFAAEAVATALAAGVHYETSAAADVMIAQRLW 127

Query: 67  HEK-FGGETHAYNVAYKDCEIDAVLS-----NCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            +         +    K+    A +       C+TI                    + G+
Sbjct: 128 RQGTLPKGRLIFCHGSKEPNYLAAIRELRSDGCETITPVLDDLNELEDLITCPHTMQFGV 187

Query: 121 R-INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           R         +    D          +  + I +    +         + +    F   L
Sbjct: 188 RERAAGNRDGRHPGQDRFGLSGAEITRAAEMIAASRHRLVLYHAMIGSQVEDEAHFLNTL 247

Query: 180 KNI---EKEFGHFITQIEWISLGGGIHFTDKDYPVKDF--------CQRLKEFSEKYSVQ 228
           ++           +  + + + GGG+  +      +           + +++   +Y V 
Sbjct: 248 RDSVVGYCRLRQQVPTLRYFNFGGGVPTSGYRLGFEFDYVGFLTRLMRVIRDTCTEYDVP 307

Query: 229 I---YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV---PDYLLYQESATIY 282
           +     E G   V   +     V  +               + +   PD +L +    + 
Sbjct: 308 MPDLVGEFGRYTVATHSVFLLEVGAVKSGQPGEPDWYLVNGSLMVSLPDSILVEGQEFVI 367

Query: 283 -----PNTGPYTAMVCGR-SCLAGDIFGEF----HFEKPVKIGDRISFEDVAGY 326
                 +       + GR +C + D++            +  G  ++   V  Y
Sbjct: 368 VPLNGWDRPVRPVRLAGRRTCDSDDVYPRPDQPPLMLPDIGEGLVLAICGVGAY 421


>gi|187736146|ref|YP_001878258.1| arginine decarboxylase [Akkermansia muciniphila ATCC BAA-835]
 gi|187426198|gb|ACD05477.1| arginine decarboxylase [Akkermansia muciniphila ATCC BAA-835]
          Length = 645

 Score = 58.6 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/289 (11%), Positives = 84/289 (29%), Gaps = 48/289 (16%)

Query: 11  KQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD----GTTSS 58
           +  L + +       + A          + +  +K      + + + ++      G  + 
Sbjct: 79  RDLLRSRIAELNDSFRKAIKEAGYQGKYQGVYPIKVNQQRQVVEEIAEFGTKYDYGLEAG 138

Query: 59  SLYEVMLGHEKF-GGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNKFKDKA 111
           S  E++           +     YKD E          +     I+    S+L+   ++A
Sbjct: 139 SKPELIAAMAHMHNPNAYLICNGYKDDEFIDLALTAQKMGLNIFIVLEMPSELDVILERA 198

Query: 112 QKLHKKIGLRINPSVSYSKFILADPNRPFSR-LGEKCKDKIE--------SEIKNVNGLM 162
           +++  +  L +   ++     L   +       G      ++          +  +  L 
Sbjct: 199 RRMDIRPNLGVRVKLAAKGSGLWQESAGDKSVFGLNAAQVVDVVDKLKQVDALDCLKLLH 258

Query: 163 FHNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDK------------ 207
           +H   +  +             I  +       +  + +GGG+                 
Sbjct: 259 YHQGSQIPNISVVREGLTEAVRIYVDLVKEGAPLGTLDMGGGLAVDYDGSKTNFHSSCNY 318

Query: 208 --DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDI 251
                 +D  + + +   KY      +  E G A+V   + L   VLD+
Sbjct: 319 SIAEFARDVVEVVGDMCSKYGVPHPTLVTESGRAVVAYYSVLVFNVLDV 367


>gi|77361749|ref|YP_341324.1| arginine decarboxylase [Pseudoalteromonas haloplanktis TAC125]
 gi|76876660|emb|CAI87882.1| arginine decarboxylase, PLP-binding, biosynthetic
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 626

 Score = 58.6 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/311 (13%), Positives = 87/311 (27%), Gaps = 46/311 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGV--------KLLLALKCFAAWGMF-DTLN--QYMD 53
           P  +     L N +DT       A            +  +K      +    L     + 
Sbjct: 60  PVLVRFTDILQNRVDTLTNAFTQARANREYQGEYTCVYPIKVNQQRSVVSKLLAHPSGLV 119

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDC------EIDAVLSNCDTIIFNTVSQLNKF 107
           G  + S  E+M                YKD        I   + +   I+   +S+L   
Sbjct: 120 GLEAGSKPELMAILGVAKEPITIVCNGYKDSEFLRLACIGQAMGHKVKIVVEKLSELTTL 179

Query: 108 KDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNV 158
            ++   L  +  + I     S  K    +      + G      + +            +
Sbjct: 180 LEEIDNLGIEPAIGIRIRLNSVGKGKWQNTGGEKGKFGLTAGQVLSAVEVLKKHNKLHLM 239

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-------- 207
             + FH   +  +       L+   + F         +  + +GGG+    +        
Sbjct: 240 QMVHFHIGSQIANIRDIHRALRECARHFAELTQLGVPLNTVDVGGGLGVDYEGSGSRSAC 299

Query: 208 ------DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
                     ++      E  +++      I  E G A+  +   L T V+D+ +   +L
Sbjct: 300 SMNYTVAEYARNVVNAFSEVCDQHQLTHPAIITESGRALTAHHAVLITDVIDVEKAPNHL 359

Query: 259 VIVDSSVEAHV 269
                +  + +
Sbjct: 360 NPEAPAQNSTL 370


>gi|256830090|ref|YP_003158818.1| arginine decarboxylase [Desulfomicrobium baculatum DSM 4028]
 gi|256579266|gb|ACU90402.1| arginine decarboxylase [Desulfomicrobium baculatum DSM 4028]
          Length = 655

 Score = 58.6 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/296 (14%), Positives = 85/296 (28%), Gaps = 43/296 (14%)

Query: 12  QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGH 67
               + +    Y  +  GV     +K      + + +++  D    G    S  E++   
Sbjct: 83  DSFASAIKALQYSGEFRGV---YPVKVNQQQQVLEEISKVGDRYNHGYEVGSKAELIAAL 139

Query: 68  EKFG-GETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKIGL 120
                 +       YKD +   +            ++    S+L    D+A+ L  K  +
Sbjct: 140 SFLKNPKACLVCNGYKDRDYIDLALYACKMGFLCFLVLEMPSELPLILDRAKALGIKPRI 199

Query: 121 RINPSVSYSKFILADPNRPF-SRLGEKCKDKI--------ESEIKNVNGLMFHNNCE--- 168
            +   VS         +    S  G    + +        +S +  V  L FH   +   
Sbjct: 200 GVRIKVSTQAGGHWAESAGDLSIFGLSTAEVVDVLDLLRGQSMLDCVQLLHFHLGSQIPN 259

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--------------DYPVKDF 214
            +           +  E       + ++ LGGG+                   +    D 
Sbjct: 260 IRDIRTAVHEATRMYAELAKEGCAMGFLDLGGGLAVDYDGSHTNYASSRNYSLEEYCTDI 319

Query: 215 CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA 267
            + +    +++      I  E G A V   + L   VLD+S      V      E 
Sbjct: 320 VESVMATVDEHDLPHPHIITESGRATVAYYSVLLFNVLDVSRLENRTVPQTLDEED 375


>gi|169245554|gb|ACA50823.1| LysA [Agrobacterium tumefaciens]
          Length = 157

 Score = 58.6 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/153 (14%), Positives = 39/153 (25%), Gaps = 21/153 (13%)

Query: 190 ITQIEWISLGGGIHFTDKDY-----------PVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
              +E I LGGG+                   + D    +K         + +EPG  + 
Sbjct: 3   GKPLETIDLGGGLGIPYFAGETPLDLAAVSAAIPDLKALVKAHPLITDAHVIVEPGRFLA 62

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY----------LLYQESATIYPNTGPY 288
            +       V  +  +     +V      H                   +  +       
Sbjct: 63  GSGGVYVAEVNSVKTSRGTTFVVMDGGMHHHLAASGNLGQIVKRNYPIVAPAMMQADYEE 122

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321
           TA + G  C   D          +K GD ++  
Sbjct: 123 TATIVGPLCTPLDTLARNAALPKLKAGDLLAIL 155


>gi|38037092|gb|AAR08423.1| arginine decarboxylase 2 [Pringlea antiscorbutica]
          Length = 711

 Score = 58.6 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/278 (12%), Positives = 82/278 (29%), Gaps = 36/278 (12%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +     L N L+               ++  + +  +KC     + + + ++     
Sbjct: 113 PLIVRFPDVLKNRLECLQSAFDCAIQSLGYDSHYQGVFPVKCNQDRFVVEDIVRFGSPFR 172

Query: 54  -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
            G  + S  E++L          +       +KD E  ++            I+     +
Sbjct: 173 FGLEAGSKPEILLAMSCLCKGNPDAFLVCNGFKDAEYVSLALLGRKLALNTVIVLEQEEE 232

Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D +QK++ +   GLR      +S    +       + G      +          
Sbjct: 233 LDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQIVRVMGKLSQTG 291

Query: 156 --KNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
               +  L FH   +  S        A    +  E       ++ I +GGG+        
Sbjct: 292 MLDCLQLLHFHIGSQIPSTSLLSDGVAEAAQLYCELVRLGAHMKVIDIGGGLGIDYDGSK 351

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTV 248
             +    +    E+Y+ +  +     +    +  +  +
Sbjct: 352 CGESDLSVAYTLEEYA-EAVVASVRYVCDRRSVKHPVI 388


>gi|37222548|gb|AAO49839.1| ornithine decarboxylase [Vitis vinifera]
          Length = 276

 Score = 58.6 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/275 (12%), Positives = 71/275 (25%), Gaps = 27/275 (9%)

Query: 40  AAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTI 96
                   L         +S  E+          +   +    K       A     +  
Sbjct: 1   PDPTFLAALAALGSSFDCASRTEIETVLGLGVSSDRIIFANPCKAESHIKYAASVGVNLT 60

Query: 97  IFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEK---CKDKIES 153
            F++  ++ K +      H K  L I                 +  L E+        + 
Sbjct: 61  TFDSRDEIEKIRKY----HPKCALLIRVKPPDDSGARCPLESKYGALPEEVTPLLQAAQD 116

Query: 154 EIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDY 209
               V+G+ FH          +   +      F       + ++  +++GGG        
Sbjct: 117 ARLTVSGVSFHIGSGATLAQAYRGAIAEARAVFDTASRLGLPRMHVLNIGGGFTXGPHFD 176

Query: 210 PVKDFCQ--RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIV-----D 262
                 +      F  ++ + I  EPG     +  TL T ++      +           
Sbjct: 177 DATXAIKSSLQAYFPNEHGLTIIAEPGRYFAESAFTLVTNIIGKRVRSELREYWINDGIY 236

Query: 263 SSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSC 297
            S+   + D       AT+       T+     +C
Sbjct: 237 GSLNCILND------HATVTAKPLACTSNSVNPTC 265


>gi|7230371|gb|AAF42970.1|AF127239_1 arginine decarboxylase 1 [Nicotiana tabacum]
 gi|7230373|gb|AAF42971.1|AF127240_1 arginine decarboxylase 1 [Nicotiana tabacum]
          Length = 720

 Score = 58.6 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 67/237 (28%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +     L N L++               A  + +  +KC     + + + ++     
Sbjct: 112 PLVVRFPDVLKNRLESLQSAFDLAVHSQGYGAHYQGVYPVKCNQDRFVVEDIVKFGSSFR 171

Query: 54  -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQ 103
            G  + S  E++L          E       +KD E          L     I+     +
Sbjct: 172 FGLEAGSKPELLLAMSCLCRGSAEGLLVCNGFKDAEYISLALVARKLMLNTVIVLEQEEE 231

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K+     IGLR      +S    +       + G      +          
Sbjct: 232 LDLVIDISRKMAVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQIVRVVKKLEESG 290

Query: 156 --KNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207
               +  L FH   +  S             I  E       +++I  GGG+     
Sbjct: 291 MLDCLQLLHFHIGSQIPSTALLADGVGEAAQIYCELIRLGAGMKFIDTGGGLGIDYD 347


>gi|298206695|ref|YP_003714874.1| putative arginine decarboxylase [Croceibacter atlanticus HTCC2559]
 gi|83849326|gb|EAP87194.1| putative arginine decarboxylase [Croceibacter atlanticus HTCC2559]
          Length = 486

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 48/394 (12%), Positives = 105/394 (26%), Gaps = 61/394 (15%)

Query: 13  KLLNNLDT----ALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           K+ +N++          K    K         K      +     +      +SS +++ 
Sbjct: 52  KISDNINRAKEWFRVAMKEHNYKGKYHYCYCTKSSHFQYVLHEALKNDIHIETSSAFDID 111

Query: 65  LG---HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--------AQK 113
           +     E+   +   + +         + +    I     + +    +            
Sbjct: 112 IVESLKEQGKIKNDTFVICNGFKRDQYLENIARLINNGHENCIPVIDNYEELNLLGDVIT 171

Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKC--KDKIESEIKNVNGLMFHNNCENKS 171
               IG+RI                   +           ++   N+  L F  N   + 
Sbjct: 172 KKYNIGIRIASEEEPKFEFYTSRLGIGYKNIVPFYNNQIKDNPQVNLKMLHFFINTGIRD 231

Query: 172 FLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKY 225
              +   L                ++ +++GGG    +    +Y  +     +    ++ 
Sbjct: 232 TAYYWNELVKCLKVYVSLKKICPTLDSLNIGGGFPIKNSLAFEYDYQYMISEIINQIKQV 291

Query: 226 S-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLLYQ 276
                     I+ E G   V  +      VL   +        +++SS    +PD     
Sbjct: 292 CDEADVPVPNIFTEFGSFTVGESGGAIYEVLYQKQQNDREKWNMINSSFITTMPDTWAIN 351

Query: 277 ES----ATIYPNTGPYTAMVCGRSCLAGD-----------IFGEFHFEKPVKIGDRISFE 321
           +     A    N      ++ G +C + D              ++  +KP+ IG    F 
Sbjct: 352 KRFVMLAVNRWNEEYERVLLGGLTCDSDDYYNSEQHMNAIYLPKYKKDKPLYIG----FF 407

Query: 322 DVAGYNINRKNWFNG-----INMPTIAVKNVDGT 350
           +   Y       F G     I  P   + + D  
Sbjct: 408 NTGAYQETIG-GFGGLHHCLIPQPKHLLIDKDEE 440


>gi|317051330|ref|YP_004112446.1| arginine decarboxylase [Desulfurispirillum indicum S5]
 gi|316946414|gb|ADU65890.1| arginine decarboxylase [Desulfurispirillum indicum S5]
          Length = 624

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/372 (11%), Positives = 97/372 (26%), Gaps = 62/372 (16%)

Query: 2   IKTPY-----YLIDKQKLLNNLDTALYIRKNAG----VKLLLALKCFAAWGMFDTLNQYM 52
           + TP+     +LI  +++        + ++        K +  +K        + L  Y 
Sbjct: 55  LSTPFIIRFPFLI-GEQIKKFYRAFQHAKEEFNYKGEHKAVFPIKVNQNRHFIERLLHYG 113

Query: 53  ----DGTTSSSLYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF 107
                G  + S  E+                  +KD E   +      +  +    +   
Sbjct: 114 KDFSYGLEAGSKAELFAVLISDIPENALITCNGFKDREFLDLAVIGKQLGKDICVIIESV 173

Query: 108 KDKAQKLHKKIGLRINPSV-------SYSKFILADPNRPFSRLGEKCKDKI--------E 152
           ++    +         P +       S         +   ++ G    + +         
Sbjct: 174 EELVGLIDIYRRAETIPDIGFRIKLSSRGSGKWEKSSGEGAKFGLSSTEILLAIDLLKEH 233

Query: 153 SEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTD--- 206
             +  VN L FH   +  +       ++     F         I+++++GGGI       
Sbjct: 234 DLLDRVNLLHFHIGSQITNVRTMKRAIREAGVIFAEVAKLGLNIKYLNIGGGIGVDYSGS 293

Query: 207 -------KDYPVKDFCQRLKEFSEKYSVQ-------IYLEPGEAIVTNTTTLNTTVLDIS 252
                   +Y +++F   +    E    +       I  E G  I      + T +++I 
Sbjct: 294 KSSSLASAEYSIEEFANDVVFTMEDMCNKHGLERPGIVTESGRVIAAYHAIVVTDLVEIM 353

Query: 253 ENIKNLVIVDSSVE------------AHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAG 300
               +L     +               ++ +    +              M     C   
Sbjct: 354 GAEYDLSHYQQTQNEVKPLLELKYALEYMNEKNYIEYYHDALEFKEDLRTMFTLGLCSLV 413

Query: 301 DIFGEFHFEKPV 312
           D        + +
Sbjct: 414 DKSNGDILFQEI 425


>gi|110835259|ref|YP_694118.1| arginine decarboxylase [Alcanivorax borkumensis SK2]
 gi|110648370|emb|CAL17846.1| arginine decarboxylase, biosynthetic [Alcanivorax borkumensis SK2]
          Length = 626

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/285 (14%), Positives = 75/285 (26%), Gaps = 48/285 (16%)

Query: 14  LLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMF-DTLNQYMDG----TTSSSL 60
           L   +       + A            +  +K      +  + L    DG      + S 
Sbjct: 69  LRQRVKLLAGAFREAIEGHQYQGDYTPVYPIKVNQQRRVVHEILRARDDGERVGLEAGSK 128

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNKFKDKAQKL 114
            E++                YKD E          L     I+    S+L      A +L
Sbjct: 129 PELLAVLALSNPGDTIVCNGYKDAEYLRLALMGEKLGFHVQIVVEKTSELPALLALADEL 188

Query: 115 HKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHN 165
                + +    +S SK    +     S+ G      + +            V  L FH 
Sbjct: 189 GVSPRIGLRVRLMSISKGNWQNTGGEKSKFGLSAPQLMAAIEHCRAAGRLDCVKLLHFHL 248

Query: 166 NCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR----- 217
             +    +              E       +E + +GGG+    +    + +C       
Sbjct: 249 GSQVANIQDIKAGMREAARYYTEMRALGAAVETVDVGGGLGVDYEGTHSRSYCSMNYGVA 308

Query: 218 ---------LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLD 250
                    L++   ++      I  E G A+  +   L   + D
Sbjct: 309 DYARHIVQTLQQQCAEHGVPEPHIISESGRALTAHHAVLLVNITD 353


>gi|38037070|gb|AAR08422.1| arginine decarboxylase 1 [Pringlea antiscorbutica]
          Length = 735

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 71/237 (29%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +     L N L++              ++  + +  +KC     + + + ++     
Sbjct: 128 PLIVRFPDVLKNRLESLQSAFDFAIQTQGYDSHYQGVYPVKCNQDRFIIEDIVEFGSSFR 187

Query: 54  -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109
            G  + S  E++L          +       +KD E  ++      +  NTV  L + ++
Sbjct: 188 FGLEAGSKPEILLAMSCLCKGNPDAFLVCNGFKDAEYVSLALLGRKLELNTVIVLEQEEE 247

Query: 110 --------KAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
                   K   +   IGLR      +S    +       + G      +          
Sbjct: 248 LELVIDLSKKMNVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTIQIVRVVRKLRQVG 306

Query: 156 --KNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207
               +  L FH   +  S        +    +  E      ++E I +GGG+     
Sbjct: 307 MLDCLQLLHFHIGSQIPSTALLSDGVSEAAQLYCELIRLGARMEVIDIGGGLGIDYD 363


>gi|86142066|ref|ZP_01060590.1| arginine decarboxylase [Leeuwenhoekiella blandensis MED217]
 gi|85831629|gb|EAQ50085.1| arginine decarboxylase [Leeuwenhoekiella blandensis MED217]
          Length = 466

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/393 (11%), Positives = 106/393 (26%), Gaps = 61/393 (15%)

Query: 13  KLLNNLDT----ALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           K+  N++               K         K      + D   +      +SS +++ 
Sbjct: 52  KISENINRAKGWFADAIAKHNYKGSYNYCYCTKSSHFKHVLDEALKNDIHIETSSAFDID 111

Query: 65  LGHEKFGGETHA---YNVAYKDCEIDAVLSNCDTIIFNTVSQ------LNKFKDKAQKLH 115
           + ++           + +         + +    I     +         +     + + 
Sbjct: 112 IVNKLKENGKITEDTFVICNGFKRDQYINNIAALINGGQKNCIPIIDNYEEINLLTEGIK 171

Query: 116 KKIGLRINPSVSYSKFILADPNRPF----SRLGEKCKDKIESEIKNVNGLMFHNNCENKS 171
               + I  +           +R      + +    +    ++  ++  L F  N   + 
Sbjct: 172 GDFKIGIRIASEEEPKFEFYTSRLGIGYKNIVPFYEEQIKNNDQVDLKMLHFFINTGIRD 231

Query: 172 FLCFSAMLKNI---EKEFGHFITQIEWISLGGGIH-------FTDKDYPVKDFCQRLKEF 221
              +   L                ++ +++GGG           D  Y V +   ++K  
Sbjct: 232 NAYYWNELNKCLKVYIRLKKICPSLDSLNIGGGFPIKNSLAFDYDYAYMVDEIINQIKIT 291

Query: 222 SEK---YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLLYQ 276
            ++       I+ E G   V  +      VL   +        +++SS    +PD     
Sbjct: 292 CDEAEVPVPNIFTEFGSFTVGESGGAIYEVLYQKQQNDREKWNMINSSFITTLPDTWAIS 351

Query: 277 ES----ATIYPNTGPYTAMVCGRSCLAGD-----------IFGEFHFEKPVKIGDRISFE 321
           +          +      ++ G +C + D               +  +KP+ IG    F 
Sbjct: 352 KRFIMLPVNRWDEEYERVLLGGLTCDSDDYYNSEQHSNAIYLPRYKKDKPLYIG----FF 407

Query: 322 DVAGYNINRKNWFNG-----INMPTIAVKNVDG 349
           +   Y       + G     I  P   + + D 
Sbjct: 408 NTGAYQETIG-GYGGLQHCLIPQPKHILIDRDE 439


>gi|148656953|ref|YP_001277158.1| Orn/DAP/Arg decarboxylase 2 [Roseiflexus sp. RS-1]
 gi|148569063|gb|ABQ91208.1| Orn/DAP/Arg decarboxylase 2 [Roseiflexus sp. RS-1]
          Length = 522

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/333 (11%), Positives = 81/333 (24%), Gaps = 40/333 (12%)

Query: 34  LALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH-----EKFGGETHAYNVAYKDCEIDA 88
            A K   A  +  T         +S+  +V + H          + + +    KD    A
Sbjct: 88  YATKANFAEEVVRTAIGAGAHYETSAAADVTIAHRLWQQGVLPSDRYIFCNGSKDDAYLA 147

Query: 89  -----VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYS---KFILADPNRPF 140
                  +    ++             A      +                   +     
Sbjct: 148 AISALRRAGFARVVPVIDDLDELETLLAMCREPLLLGVRERHAPADVDADHPGGERFGLT 207

Query: 141 SRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWIS 197
               E+  +++      +         + +    ++  L    +           +   +
Sbjct: 208 PDEIEQVVERLRHTPHRLVMYHAMVGSQIEDADRWNMRLARSAEAYARLRQQAPSLMLFN 267

Query: 198 LGGGIHFT----DKDYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNT 246
            GGG+  +    D  +    F +RL                 +  E G   V +      
Sbjct: 268 FGGGMPTSAYSLDFRFDYVGFLERLMRTLASTCAAHNVPQPTLVGEFGRYTVASHNVFIM 327

Query: 247 TVLDISENIKNLVIVDSSVEAHV---PDYLLYQESATIY-----PNTGPYTAMVCGR-SC 297
            V  +     +         + +   PD L+      I       +       + GR +C
Sbjct: 328 EVGRVKRGQGDAPDWVLINGSLMVSLPDSLIVPGQEFIILPLDGWDRPVRPVRLAGRLTC 387

Query: 298 LAGDIFGEFHFEKPVKI----GDRISFEDVAGY 326
            + D F        +      G +I+F  V  Y
Sbjct: 388 DSDDFFPRPGAPPLLLPDPYPGQKIAFFGVGAY 420


>gi|169245568|gb|ACA50830.1| LysA [Agrobacterium tumefaciens]
          Length = 157

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 38/153 (24%), Gaps = 21/153 (13%)

Query: 190 ITQIEWISLGGGIHFTDKDY-----------PVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
              +E I LGGG+                   + D    LK         I +EPG  + 
Sbjct: 3   GKPLETIDLGGGLGIPYFAGETPLDLEKVSAAIPDLKALLKAHPLVADAHIIVEPGRFLA 62

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY----------LLYQESATIYPNTGPY 288
                    V  +  +     +V      H                   +  +       
Sbjct: 63  GPAGIYVAEVNSVKNSRGTTFVVMDGGMHHHLAASGNLGQIVKRNYPIVAPAMMQADYEE 122

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321
           TA + G  C   D          +K GD ++  
Sbjct: 123 TATIVGPLCTPLDTLARNAALPKLKAGDLLAIL 155


>gi|3915009|sp|Q39827|SPE1_SOYBN RecName: Full=Arginine decarboxylase; Short=ADC; Short=ARGDC
 gi|1163181|gb|AAD09204.1| arginine decarboxylase [Glycine max]
          Length = 692

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/332 (12%), Positives = 91/332 (27%), Gaps = 50/332 (15%)

Query: 12  QKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSS 59
             L N L++               +  + +  +KC     + + + ++      G  + S
Sbjct: 120 DVLKNRLESLQSAFDYAIQSGGYESHYQGVYPVKCNQDRFVVEDIVKFGSPFRFGLEAGS 179

Query: 60  LYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDTIIFNT------VSQLNKFKDK 110
             E++L          +       +KD E  ++    + +  NT        +++   + 
Sbjct: 180 KPELLLAMSCLCKGNPDGLLICNGFKDAEYISLALVANKLALNTVIVVEQEEEVDLIVEL 239

Query: 111 AQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL------- 161
           ++KL  K   GLR      +S        R         +     +  ++ G+       
Sbjct: 240 SKKLCIKPVIGLRAKLRTKHSGHFGGIFRRRGKFGLTTARVLRVVKNLDLAGMLDCLQLL 299

Query: 162 MFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK----------- 207
            FH   +  S             I  E       +  I +GGG+                
Sbjct: 300 HFHIGSQIPSTALLADGVGEAAQIYCELVRLGANMRVIDIGGGLGIDYDGSKSCDSDISV 359

Query: 208 ----DYPVKDFCQRLKEFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIV 261
               +         ++   ++      +  E G AIV++ + L    +  S         
Sbjct: 360 EYGLEEYAAAVVHAVQCVCDRSVKHPVICSESGRAIVSHHSVLIFEAVGTSSTNGGGAPP 419

Query: 262 DSSVEAHVPDYLLYQESATIYPNTGPYTAMVC 293
             S      +        +     G Y   + 
Sbjct: 420 ALSAHYLAEELSEDYGYLSELAFRGDYETCLV 451


>gi|171913043|ref|ZP_02928513.1| arginine decarboxylase [Verrucomicrobium spinosum DSM 4136]
          Length = 642

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/298 (12%), Positives = 84/298 (28%), Gaps = 48/298 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAG--------VKLLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L   ++       NA          + +  +K      + + + +Y     
Sbjct: 65  PVLIRFGDLLRWRIEELNESFNNAIREANYKGVYRGVYPIKVNQQQEVIEEVTRYGRKYH 124

Query: 53  DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLN 105
            G  + S  E++         E +     YKD E          +     ++    S+L+
Sbjct: 125 YGLEAGSKPELIAALAYMQDPEAYIVCNGYKDEEFIDLALRAQKMGLQVILVLEMPSELD 184

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSR-LGEKCKDKIESEI--------K 156
              ++++ L     L +   +S         +       G      + +           
Sbjct: 185 LILERSRLLGITPQLGVRIRLSTESAGHWSESGGDQSVFGLNISQVMRTVDVLREKGMLD 244

Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---- 209
            +  L +H   +    ++    +     +         ++  + LGGG+  +        
Sbjct: 245 CLQMLHYHQGSQIPSIRAIRNAAVEAARVYVGLVQEGAKMGILDLGGGLAISYDGLKSNE 304

Query: 210 -------------PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254
                         V +    + + +      I  E G AIV   + L   VLDI+  
Sbjct: 305 TSSADYGMKEYCADVIEAISEVTDEAGIPHPNIISESGRAIVAYYSVLVINVLDINRY 362


>gi|57167760|ref|ZP_00366900.1| arginine decarboxylase [Campylobacter coli RM2228]
 gi|305432216|ref|ZP_07401380.1| arginine 2-monooxygenase [Campylobacter coli JV20]
 gi|57020882|gb|EAL57546.1| arginine decarboxylase [Campylobacter coli RM2228]
 gi|304444759|gb|EFM37408.1| arginine 2-monooxygenase [Campylobacter coli JV20]
          Length = 611

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 50/289 (17%), Positives = 88/289 (30%), Gaps = 45/289 (15%)

Query: 12  QKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEV 63
           +++ +   +    RK    K     +  LK     G    L +       G  + S  E+
Sbjct: 57  KQIESIYGSFNKARKEFNYKGKFNAVYPLKVNQYPGFVKNLVRLGKDYNYGLEAGSKAEL 116

Query: 64  MLGHEKFGGETHAYNVAYKDC------EIDAVLSNCDTIIFNTVSQLNKFKDKA---QKL 114
           +L       +       +KD        I A + +  T+    +++L    D A    K 
Sbjct: 117 LLAMAYNNEDAPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIVDIAKERFKP 176

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNN 166
              IGLR+    S    I A      S+ G    + IE+          +    + FH  
Sbjct: 177 KPNIGLRVRL-HSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLG 235

Query: 167 CENKSFLCFSAMLKN---IEKEFGHFI-TQIEWISLGGGIHFTDKDY------------- 209
            +          L     I  E        ++ I+LGGG+      +             
Sbjct: 236 SQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREY 295

Query: 210 --PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
              V    + + E  +     I++E G  +  N   L   VL++     
Sbjct: 296 ANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLVAPVLELFSQEY 344


>gi|226328362|ref|ZP_03803880.1| hypothetical protein PROPEN_02256 [Proteus penneri ATCC 35198]
 gi|225203095|gb|EEG85449.1| hypothetical protein PROPEN_02256 [Proteus penneri ATCC 35198]
          Length = 546

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/294 (11%), Positives = 77/294 (26%), Gaps = 30/294 (10%)

Query: 32  LLLALKCFAAWGMFDTLNQYM--DGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID 87
           L+  +K      + ++L       G  + S  E+M  L H          N       I 
Sbjct: 9   LVYPIKVNQQRRVIESLINAGEPLGLEAGSKAELMAVLAHANMTSSVIVCNGYKDREYIR 68

Query: 88  -----AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS- 141
                  L +   ++   +S++    ++A++L     L +   ++         +     
Sbjct: 69  LALTGEKLGHKVFLVIEKMSEIKMVLEEAERLEVIPRLGVRARLASQGSGKWQASGGEKS 128

Query: 142 RLGEKCKDKIESEIK--------NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFI 190
           + G      ++            ++  L FH   +    +              E     
Sbjct: 129 KFGLAATQVLQLIDMLRQAGRIDSLQLLHFHLGSQMANIRDIATGVRESARFYVELHKLG 188

Query: 191 TQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI------VTNTTTL 244
             I++  +GGG+    +    +  C  +     +Y+  +    G+A            T 
Sbjct: 189 VNIQYFDVGGGLGVDYEGTRSQSDCS-VNYGLNEYANNVIWAIGDACDENDLPHPTVITE 247

Query: 245 NTTVLDISENIKNLVIVDSSVEAH--VPDYLLYQESATIYPNTGPYTAMVCGRS 296
           +   L     +    ++         +                        G S
Sbjct: 248 SGRALTAHHTVLISNVIGVERNEFTAITPPEEDAARPIASLWETWEEMQTKGHS 301


>gi|169245574|gb|ACA50833.1| LysA [Agrobacterium tumefaciens]
          Length = 157

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 38/153 (24%), Gaps = 21/153 (13%)

Query: 190 ITQIEWISLGGGIHFTDKDY-----------PVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
              +E I LGGG+                   + D    LK         I +EPG  + 
Sbjct: 3   GKPLETIDLGGGLGIPYFAGETPLDLEKVSAAIPDLKALLKAHPLVADAHIIVEPGRFLA 62

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY----------LLYQESATIYPNTGPY 288
                    V  +  +     ++      H                   +  +       
Sbjct: 63  GPAGIYVAEVNSVKNSRGTTFVLMDGGMHHHLAASGNLGQIVKRNYPIVAPAMMQADYEE 122

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321
           TA + G  C   D          +K GD ++  
Sbjct: 123 TATIVGPLCTPLDTLARNAALPKLKAGDLLAIL 155


>gi|149570734|ref|XP_001506306.1| PREDICTED: similar to arginine decarboxylase, partial
           [Ornithorhynchus anatinus]
          Length = 142

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 1/58 (1%)

Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
           Y++ + G +C   +   E      +++GD ++FE++  Y     + F     P   V 
Sbjct: 36  YSSSLWGPACDGPEPIAEGLRLPDLQVGDWLTFENMGAYTAGPASPF-SAARPRRIVY 92


>gi|6715492|gb|AAF26435.1| arginine decarboxylase [Brassica juncea]
          Length = 680

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 47/325 (14%), Positives = 94/325 (28%), Gaps = 36/325 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +     L N L+                +  + +  +KC     + + + ++     
Sbjct: 97  PVIVRFPDVLKNRLECLQSAFDFAVQSQGYESHYQGVYPVKCNQDRFVVEDIVRFGSQFR 156

Query: 54  -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109
            G  + S  E++L          E       +KD E  ++      +  NTV  L + ++
Sbjct: 157 FGLEAGSKPEILLAMSCLCKGNNEAFLICNGFKDAEYVSLALLGRKLALNTVIVLEQEEE 216

Query: 110 K--------AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN-- 159
                       +   IGLR      +S    +       + G      +    K V   
Sbjct: 217 LDLGIDLSHKMNVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQIVRVVRKLVCLT 275

Query: 160 ---GLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213
               L FH   +  S        +    +  E       ++ I +GGG+          +
Sbjct: 276 VSSFLHFHIGSQIPSTSLLSDGVSEAAQLYCELVRLGANMKVIDIGGGLGIDYDGSKSGE 335

Query: 214 FCQRLKEFSEKYSVQIYLE----PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV 269
               +    E+Y+  +            V +    + +   I  +   L+    S   H 
Sbjct: 336 SDLSVAYTLEEYAEAVVASVRFVCERRSVKHPVICSESGRAIVSHHSVLIFEAVSTVKHQ 395

Query: 270 PDYLLYQESATIYPNTGPYTAMVCG 294
            D+   Q           Y+A++ G
Sbjct: 396 ADHDDIQFLLEGDDYEELYSAVMRG 420


>gi|182415277|ref|YP_001820343.1| arginine decarboxylase [Opitutus terrae PB90-1]
 gi|177842491|gb|ACB76743.1| arginine decarboxylase [Opitutus terrae PB90-1]
          Length = 645

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/227 (11%), Positives = 62/227 (27%), Gaps = 31/227 (13%)

Query: 12  QKLLNNL----DTALYIRKNAGVKLLL----ALKCFAAWGMFDTL----NQYMDGTTSSS 59
             L + +    +      K  G K        +K      + D +      Y  G  + S
Sbjct: 71  DLLRHRVIQLNEMFQKAIKEEGYKGSYRGVFPIKVNQLREVVDEIVAAGKDYAFGLEAGS 130

Query: 60  LYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCD------TIIFNTVSQLNKFKDKAQ 112
             E+M+      G +       YKD +   +            I+   +++L+     A 
Sbjct: 131 KPELMIALAMHEGSQRLIICNGYKDHDYIRLALLGRKLGKKIIIVVEQLAELDDIIRLAA 190

Query: 113 KLHKKIGLRINPSVSYSKFILAD-PNRPFSRLGEKCKDKIES--------EIKNVNGLMF 163
           +   K  +     +               ++ G    + + +          +++  + F
Sbjct: 191 ETGVKPMIGFRAKLQTRGEGKWALSTGDNAKFGLNTAEILFAIEKLRAAKLTQSLRLIHF 250

Query: 164 HNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207
           H   +     +             +       + ++ +GGG+     
Sbjct: 251 HIGSQVPNIITIKNAVIEATRFYCQLAKMGFPMGYLDVGGGLGIDYD 297


>gi|86152170|ref|ZP_01070382.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni 260.94]
 gi|86153261|ref|ZP_01071465.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|121613374|ref|YP_001000453.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|167005396|ref|ZP_02271154.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|283957254|ref|ZP_06374715.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni 1336]
 gi|315124287|ref|YP_004066291.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|85840955|gb|EAQ58205.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni 260.94]
 gi|85842987|gb|EAQ60198.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|87249384|gb|EAQ72344.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|283791266|gb|EFC30074.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni 1336]
 gi|315018009|gb|ADT66102.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 610

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 52/289 (17%), Positives = 87/289 (30%), Gaps = 45/289 (15%)

Query: 12  QKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEV 63
           +++ N        RK  G K     +  LK     G    L +       G  + S  E+
Sbjct: 56  KQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAEL 115

Query: 64  MLGHEKFGGETHAYNVAYKDC------EIDAVLSNCDTIIFNTVSQLNKFKDKA---QKL 114
           +L               +KD        I A + +  T+    +++L    D A    K 
Sbjct: 116 LLAMAYNNEGAPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKP 175

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNN 166
              IGLR+    S    I A      S+ G    + IE+          +    + FH  
Sbjct: 176 KPNIGLRVRL-HSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLG 234

Query: 167 CENKSFLCFSAMLKN---IEKEFGHFI-TQIEWISLGGGIHFTDKDY------------- 209
            +          L     I  E        ++ I+LGGG+      +             
Sbjct: 235 SQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREY 294

Query: 210 --PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
              V    + + E  +     I++E G  +  N   L   VL++     
Sbjct: 295 ANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEY 343


>gi|332969581|gb|EGK08599.1| arginine 2-monooxygenase [Kingella kingae ATCC 23330]
          Length = 629

 Score = 57.5 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 74/262 (28%), Gaps = 30/262 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL--NQYMDG 54
           P  L   Q L + L +     + A           L+  +K      + ++L  +    G
Sbjct: 58  PILLCFPQILQHRLRSINQAFQAAREDFGYNGNYCLVYPIKVNQHRRVIESLIHSNQPHG 117

Query: 55  TTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
             + S  E+M      G  +T      YKD E        + +       + K  +    
Sbjct: 118 LEAGSKAELMAVLAHAGTTQTLIVCNGYKDREYIRFALMGEKLGHKVYLVIEKLSEIQMV 177

Query: 114 LHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIE--------SEIKNV 158
           L +   L + P         S             S+ G      ++        + +  +
Sbjct: 178 LEEAAKLGVKPRLGVRARLASQGSGKWQASGGDKSKFGLSASQVLQLVELLKQNNHLDCL 237

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +    +              E       I+   +GGG+    +    +  C
Sbjct: 238 QLLHFHLGSQLGNIRDVATGVHESARFYVELHKLGVNIQCFDVGGGLGVDYEGNRTQSDC 297

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +     +Y+  +    G+A 
Sbjct: 298 S-VNYSLSEYASTVVWGIGQAC 318


>gi|86150176|ref|ZP_01068403.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88597564|ref|ZP_01100798.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|85839292|gb|EAQ56554.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88190156|gb|EAQ94131.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|315058218|gb|ADT72547.1| Arginine decarboxylase [Campylobacter jejuni subsp. jejuni S3]
 gi|315928309|gb|EFV07625.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 610

 Score = 57.5 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 52/289 (17%), Positives = 87/289 (30%), Gaps = 45/289 (15%)

Query: 12  QKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEV 63
           +++ N        RK  G K     +  LK     G    L +       G  + S  E+
Sbjct: 56  KQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAEL 115

Query: 64  MLGHEKFGGETHAYNVAYKDC------EIDAVLSNCDTIIFNTVSQLNKFKDKA---QKL 114
           +L               +KD        I A + +  T+    +++L    D A    K 
Sbjct: 116 LLAMAYNNEGAPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKP 175

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNN 166
              IGLR+    S    I A      S+ G    + IE+          +    + FH  
Sbjct: 176 KPNIGLRVRL-HSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLG 234

Query: 167 CENKSFLCFSAMLKN---IEKEFGHFI-TQIEWISLGGGIHFTDKDY------------- 209
            +          L     I  E        ++ I+LGGG+      +             
Sbjct: 235 SQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREY 294

Query: 210 --PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
              V    + + E  +     I++E G  +  N   L   VL++     
Sbjct: 295 ANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEY 343


>gi|148926933|ref|ZP_01810610.1| biosynthetic arginine decarboxylase [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|157415035|ref|YP_001482291.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni 81116]
 gi|145845017|gb|EDK22114.1| biosynthetic arginine decarboxylase [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|157385999|gb|ABV52314.1| biosynthetic arginine decarboxylase [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|307747674|gb|ADN90944.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni M1]
 gi|315931179|gb|EFV10151.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni 327]
          Length = 610

 Score = 57.5 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 52/289 (17%), Positives = 87/289 (30%), Gaps = 45/289 (15%)

Query: 12  QKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEV 63
           +++ N        RK  G K     +  LK     G    L +       G  + S  E+
Sbjct: 56  KQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAEL 115

Query: 64  MLGHEKFGGETHAYNVAYKDC------EIDAVLSNCDTIIFNTVSQLNKFKDKA---QKL 114
           +L               +KD        I A + +  T+    +++L    D A    K 
Sbjct: 116 LLAMAYNNEGAPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKP 175

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNN 166
              IGLR+    S    I A      S+ G    + IE+          +    + FH  
Sbjct: 176 KPNIGLRVRL-HSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLG 234

Query: 167 CENKSFLCFSAMLKN---IEKEFGHFI-TQIEWISLGGGIHFTDKDY------------- 209
            +          L     I  E        ++ I+LGGG+      +             
Sbjct: 235 SQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREY 294

Query: 210 --PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
              V    + + E  +     I++E G  +  N   L   VL++     
Sbjct: 295 ANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEY 343


>gi|145520869|ref|XP_001446290.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124413767|emb|CAK78893.1| unnamed protein product [Paramecium tetraurelia]
          Length = 318

 Score = 57.5 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 71/259 (27%), Gaps = 26/259 (10%)

Query: 99  NTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV 158
              SQ+   +  A ++     + I          L                K   +I+ +
Sbjct: 39  EFKSQVQIIQKIAPQMKILWRISIVEENPGQMATLFSGKFGDDVPNLDAAHKRFKQIQQM 98

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFGHFIT-QIEWISLGGGIHFTDKDYPVKDFCQR 217
              +   +    S +  S+           +   +       G IH              
Sbjct: 99  GIQLHGIHFHCGSAVQGSSSFGKTIDLAQDYGVVRYRRGFPTGNIHEN-------AIKAL 151

Query: 218 LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
            +  ++    ++  EPG     N+ +L   +L        L    +    H  + +L   
Sbjct: 152 KRTENDPLGYEVIAEPGRHFSANSCSLLFRILTKRIKHGRLCYHVNESLYHSFNSILMDG 211

Query: 278 SATIYPNTGPYTA-----------------MVCGRSCLAGDIFGEFHFEK-PVKIGDRIS 319
            +    N   Y+                   + G +C   D+          + +GD + 
Sbjct: 212 ISFENLNDQFYSVLNSDESQNSQISDQSNVSIFGMTCDGADVIANNITVPTDMNVGDWLC 271

Query: 320 FEDVAGYNINRKNWFNGIN 338
            + +  Y I  K+ FNG+ 
Sbjct: 272 MQGMGSYTIGPKSTFNGMK 290


>gi|6646840|emb|CAB64599.1| arginine decarboxylase 1 [Datura stramonium]
          Length = 724

 Score = 57.5 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 68/230 (29%), Gaps = 35/230 (15%)

Query: 12  QKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSS 59
             L N L++               A  + +  +KC     + + + ++      G  + S
Sbjct: 124 DVLKNRLESLQSAFDMAVHSQGYEAHYQGVYPVKCNQDRFVVEDIVKFGSPYRFGLEAGS 183

Query: 60  LYEVMLG---HEKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKFKDK 110
             E++L      K   +       +KD E  ++            I+     +L+   D 
Sbjct: 184 KPELLLAMSCLSKGSADALLVCNGFKDTEYISLALVARKLLLNTVIVLEQEEELDLVIDI 243

Query: 111 AQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNG 160
           ++K+     IGLR      +S    +       + G      +              +  
Sbjct: 244 SRKMAVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILRVVKKLDESGMLDCLQL 302

Query: 161 LMFHNNCENKSFL---CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207
           L FH   +  S             I  E       +++I +GGG+     
Sbjct: 303 LHFHIGSQIPSTDLLADGVGEATQIYSELARLGAGMKFIDIGGGLGIDYD 352


>gi|57237609|ref|YP_178857.1| arginine decarboxylase [Campylobacter jejuni RM1221]
 gi|57166413|gb|AAW35192.1| arginine decarboxylase [Campylobacter jejuni RM1221]
          Length = 611

 Score = 57.5 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 52/289 (17%), Positives = 87/289 (30%), Gaps = 45/289 (15%)

Query: 12  QKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEV 63
           +++ N        RK  G K     +  LK     G    L +       G  + S  E+
Sbjct: 57  KQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAEL 116

Query: 64  MLGHEKFGGETHAYNVAYKDC------EIDAVLSNCDTIIFNTVSQLNKFKDKA---QKL 114
           +L               +KD        I A + +  T+    +++L    D A    K 
Sbjct: 117 LLAMAYNNEGAPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKP 176

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNN 166
              IGLR+    S    I A      S+ G    + IE+          +    + FH  
Sbjct: 177 KPNIGLRVRL-HSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLG 235

Query: 167 CENKSFLCFSAMLKN---IEKEFGHFI-TQIEWISLGGGIHFTDKDY------------- 209
            +          L     I  E        ++ I+LGGG+      +             
Sbjct: 236 SQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREY 295

Query: 210 --PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
              V    + + E  +     I++E G  +  N   L   VL++     
Sbjct: 296 ANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEY 344


>gi|308048328|ref|YP_003911894.1| arginine decarboxylase [Ferrimonas balearica DSM 9799]
 gi|307630518|gb|ADN74820.1| arginine decarboxylase [Ferrimonas balearica DSM 9799]
          Length = 633

 Score = 57.5 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/299 (12%), Positives = 76/299 (25%), Gaps = 47/299 (15%)

Query: 5   PYYLIDKQKLLNNLD----TALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM---D 53
           P  +   + L + +            + G K     +  +K      +   L        
Sbjct: 61  PLLVRFPEILHSQVQGLCGAFRNAISDYGYKGDYLAVYPIKVNQQRSVVTELIAGGREQL 120

Query: 54  GTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112
           G  + S  E+M          +      YKD E   +      + +     + K  +   
Sbjct: 121 GLEAGSKGELMAVLAMAQDAASVIVCNGYKDREYVRLALIGQKMGYEVYLVIEKMSELDL 180

Query: 113 KLHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIESEIK--------N 157
            L +   L + P         S  K          S+ G      ++   +         
Sbjct: 181 VLEEGRKLGVIPRLGVRARLASQGKGKWQSSGGEKSKFGLSAAQILKLVERLRAEGQLDC 240

Query: 158 VNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------- 207
           +  L FH   +    +              E       +  + +GGG+    +       
Sbjct: 241 LQLLHFHLGSQMSNIRDIQKGLTECGRFYMELRKIGAPVAIVDVGGGLGVDYEGTRSQSS 300

Query: 208 ---DYPVKDFCQRLKEFSEKYSVQI-------YLEPGEAIVTNTTTLNTTVLDISENIK 256
              +Y ++++   +         Q          E G A+  +   L   V+ +     
Sbjct: 301 CSVNYSLQEYANNVVYAIGDVCRQYQLPHPRLISESGRAMTAHHAVLIADVIGVEAYQP 359


>gi|297569192|ref|YP_003690536.1| arginine decarboxylase [Desulfurivibrio alkaliphilus AHT2]
 gi|296925107|gb|ADH85917.1| arginine decarboxylase [Desulfurivibrio alkaliphilus AHT2]
          Length = 643

 Score = 57.5 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/258 (10%), Positives = 70/258 (27%), Gaps = 33/258 (12%)

Query: 12  QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYMDGTTSSS 59
             L N +         A          + +  +K      + + +    + Y  G    S
Sbjct: 74  DLLRNRVARINRAFSEAIAEAEYRNQYRGVYPVKVNQLREVVEEILDAGHDYHHGLEVGS 133

Query: 60  LYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLNKFKDKAQ 112
             E+          ++      YKD +   V            ++   V ++ +      
Sbjct: 134 KPELHAALALHEDPDSLIVCNGYKDEDYVRVALIGRKLGKKVILVVEKVEEIRQIIAMVN 193

Query: 113 KLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMF 163
           K+  +  +      +S  K   A+     ++ G    D + +            +  + F
Sbjct: 194 KMKVEPLIGFRVRLMSGGKGKWAESGGENAKFGLSTIDIMRASRLLQEANMAHCLKLVHF 253

Query: 164 HNNCENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQRLK 219
           H   +    L     ++     +          +E++ +GGG+           F   + 
Sbjct: 254 HIGSQVPDILTIKKAVREGAMFYAKLSKLAHPGLEYLDVGGGLGVDYDG-SRTTFHSSIN 312

Query: 220 EFSEKYSVQIYLEPGEAI 237
               +Y+  +     +  
Sbjct: 313 YSLNEYARDVIYNIMDVC 330


>gi|218562392|ref|YP_002344171.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|112360098|emb|CAL34892.1| biosynthetic arginine decarboxylase [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|284926010|gb|ADC28362.1| arginine decarboxylase [Campylobacter jejuni subsp. jejuni IA3902]
          Length = 611

 Score = 57.5 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 52/289 (17%), Positives = 87/289 (30%), Gaps = 45/289 (15%)

Query: 12  QKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEV 63
           +++ N        RK  G K     +  LK     G    L +       G  + S  E+
Sbjct: 57  KQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAEL 116

Query: 64  MLGHEKFGGETHAYNVAYKDC------EIDAVLSNCDTIIFNTVSQLNKFKDKA---QKL 114
           +L               +KD        I A + +  T+    +++L    D A    K 
Sbjct: 117 LLAMAYNNEGAPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKP 176

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNN 166
              IGLR+    S    I A      S+ G    + IE+          +    + FH  
Sbjct: 177 KPNIGLRVRL-HSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLG 235

Query: 167 CENKSFLCFSAMLKN---IEKEFGHFI-TQIEWISLGGGIHFTDKDY------------- 209
            +          L     I  E        ++ I+LGGG+      +             
Sbjct: 236 SQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREY 295

Query: 210 --PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
              V    + + E  +     I++E G  +  N   L   VL++     
Sbjct: 296 ANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEY 344


>gi|94499816|ref|ZP_01306352.1| arginine decarboxylase [Oceanobacter sp. RED65]
 gi|94428017|gb|EAT12991.1| arginine decarboxylase [Oceanobacter sp. RED65]
          Length = 647

 Score = 57.5 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/251 (10%), Positives = 74/251 (29%), Gaps = 32/251 (12%)

Query: 11  KQKLLNNLDTALYIRKNAG--------VKLLLALKCFAAWGMFDTLNQYMD----GTTSS 58
           +  L   +         A          + +  +K      + + +  +      G  + 
Sbjct: 78  ENLLDARISALNEAFARAIQSYQYGNVYRGVFPIKVNQQCHVVEEIADFGSRYHHGLEAG 137

Query: 59  SLYEVMLGHEKF-GGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKA 111
           S  E+++   K    E+      YKD E          +      +  ++ +L    +++
Sbjct: 138 SKAELIIALSKLHDNESMIVCNGYKDAEFIELGLYAKEMGINCIFVLESLKELPIILERS 197

Query: 112 QKLHKKIGLRINPSVS-YSKFILADPNRPFSRLGEK-------CKDKIESEIKN-VNGLM 162
           + L  +  L +    S        + +   S  G          ++  ++ + + +  L 
Sbjct: 198 EALGIEPLLGVRIRSSVTVDGHWNEDSGDRSIFGMSTHSLVRVVEELKQANMLHCLQLLH 257

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLK 219
            H   +  +       +    + +         + ++ LGGG+    +     +    + 
Sbjct: 258 CHLGSQIPNIRNIRMGVMEACRFYSGLIEQGAPMGYLDLGGGLAVDYEG-ASSNHTHSMN 316

Query: 220 EFSEKYSVQIY 230
              ++Y   I 
Sbjct: 317 YQLDEYCNNIV 327


>gi|78778431|ref|YP_396543.1| arginine decarboxylase [Prochlorococcus marinus str. MIT 9312]
 gi|123554841|sp|Q31DD8|SPEA_PROM9 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|78711930|gb|ABB49107.1| arginine decarboxylase [Prochlorococcus marinus str. MIT 9312]
          Length = 648

 Score = 57.1 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 42/313 (13%), Positives = 95/313 (30%), Gaps = 48/313 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAG--------VKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +     L + ++        A          + +  +KC     + + + ++     
Sbjct: 69  PLIIRFNDILKDRINALHDSFFKAIKTYKYKNIYQGVFPVKCNQQKNVLEKIIEFGSQWN 128

Query: 54  -GTTSSSLYEVMLGHEKFGG-ETHAYNVAYKDCEIDAVLSNCD------TIIFNTVSQLN 105
            G    S  E+++G        +      YKD +   + +          I+     ++ 
Sbjct: 129 FGLEVGSKSELLIGLALLENQNSLLICNGYKDKKYIEIATLARKLGKNPIIVIEQRDEVK 188

Query: 106 KFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKI--------ESEIK 156
           +     Q+L+    + I   +S              S+ G    + +         + I 
Sbjct: 189 RIIQAVQELNATPLIGIRAKLSSKSSGRWGKSIGDNSKFGLSIPEIMLTIKELKEANLIN 248

Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDK------ 207
            +  L FH   +          L+   +   E       +++I +GGG+           
Sbjct: 249 EMKLLHFHIGSQISDIAVIKDALQEASQIYVELCKLGAPMQYIDVGGGLGIDFDGTKTSS 308

Query: 208 ----DYPVKDFCQRLKEFSEK-------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
               +Y ++++   +    +            I  E G AI+++ + L   VL  S    
Sbjct: 309 NTSTNYSLQNYANDVIATIKDSCELNNIKHPIIISESGRAIISHCSVLIFNVLGTSHVSS 368

Query: 257 NLVIVDSSVEAHV 269
            L I D   +  +
Sbjct: 369 KLQIFDKKNQQLI 381


>gi|311693163|gb|ADP96036.1| biosynthetic arginine decarboxylase [marine bacterium HP15]
          Length = 636

 Score = 57.1 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/323 (11%), Positives = 82/323 (25%), Gaps = 56/323 (17%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL-------N 49
           P  +     L + ++                 G   +  +K      + + L       +
Sbjct: 61  PVLVRFVDILHDRVNKLCNAFNKVAEEHAYQGGYTAVYPIKVNQQRRVVEELLAAEPAAS 120

Query: 50  QYMDGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
               G  + S  E+M  L   +  G     N       I        L +   I+    S
Sbjct: 121 NGQIGLEAGSKPELMAVLAMSQQPGSVIVCNGYKDREYIRLALIGQTLGHRVFIVVEKKS 180

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSK-FILADPNRPFSRLGEKCKDKIESEI------ 155
           +L    ++A+ L     + +   ++        +     S+ G      ++         
Sbjct: 181 ELPLILEEAKSLGVSPLIGVRARLATIGKGNWQNTGGEKSKFGLSASQVLDVVDTLREAG 240

Query: 156 --KNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207
               +  L FH   +    +              E       I  + +GGG+    +   
Sbjct: 241 ALDTLQLLHFHLGSQIANIRDIQTGLRECARFYSELRQMGAPIGTVDIGGGLGVDYEGTR 300

Query: 208 -----------DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISE 253
                           +    L+   +++      +  E G A+  + + L T V+D   
Sbjct: 301 SRSSCSMNYSVYEYAYNVVHVLQAECDRHGTPHPDLISESGRALTAHHSVLVTNVIDHEA 360

Query: 254 NIKNLVIVDSSV-----EAHVPD 271
                     +           D
Sbjct: 361 PENRTPQQPGATASAPLHDLWRD 383


>gi|33340101|gb|AAQ14538.1|AF306451_1 arginine decarboxylase [Pinus sylvestris]
          Length = 551

 Score = 57.1 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/236 (12%), Positives = 68/236 (28%), Gaps = 33/236 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L + L++               +  + +  +KC     + + + ++     
Sbjct: 56  PLIIRFPDVLKHRLESLQSAFDSAMRMQSYESYFQGVYPVKCNQDRYVVENIVEFGKPYA 115

Query: 53  DGTTSSSLYEVMLGHEKF---GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109
            G  + S  E++L          +       YKD E  ++      + FN V  L + ++
Sbjct: 116 FGLEAGSKPELLLAMASMCKASPKALLVCNGYKDEEYISLALTARRLNFNCVIVLEQEEE 175

Query: 110 KAQKLHKKIGLRINPSVSY-------SKFILADPNRPFSRLGEKCKDKIESEI------- 155
               L+    L + P +                 +    + G    + +           
Sbjct: 176 LDLVLNVSRKLSVRPVIGVRAKLRTKHGGHFGATSGEKGKFGLTSLEIVGIVRKLQKLGM 235

Query: 156 -KNVNGLMFHNNCENKSFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDK 207
              +  L FH   +       +        I  E       ++ I +GGG+    +
Sbjct: 236 LDCLQLLHFHIGSQIPCVEVLNDGVSEAAYIYSELAKLGANMKIIDIGGGLGIDYE 291


>gi|153952578|ref|YP_001398308.1| arginine decarboxylase [Campylobacter jejuni subsp. doylei 269.97]
 gi|152940024|gb|ABS44765.1| arginine decarboxylase [Campylobacter jejuni subsp. doylei 269.97]
          Length = 610

 Score = 57.1 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 51/289 (17%), Positives = 87/289 (30%), Gaps = 45/289 (15%)

Query: 12  QKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEV 63
           +++ N        +K  G K     +  LK     G    L +       G  + S  E+
Sbjct: 56  KQIENIYGNFNKAKKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAEL 115

Query: 64  MLGHEKFGGETHAYNVAYKDC------EIDAVLSNCDTIIFNTVSQLNKFKDKA---QKL 114
           +L               +KD        I A + +  T+    +++L    D A    K 
Sbjct: 116 LLAMAYNNEGAPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKP 175

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNN 166
              IGLR+    S    I A      S+ G    + IE+          +    + FH  
Sbjct: 176 KPNIGLRVRL-HSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKFLEQFTMIHFHLG 234

Query: 167 CENKSFLCFSAMLKN---IEKEFGHFI-TQIEWISLGGGIHFTDKDY------------- 209
            +          L     I  E        ++ I+LGGG+      +             
Sbjct: 235 SQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKNRNYTLREY 294

Query: 210 --PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
              V    + + E  +     I++E G  +  N   L   VL++     
Sbjct: 295 ANDVIFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEY 343


>gi|157888667|emb|CAP09405.1| antizyme inhibitor 1 [Danio rerio]
          Length = 230

 Score = 57.1 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 59/198 (29%), Gaps = 30/198 (15%)

Query: 158 VNGLMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDF 214
           V G+ F      K    ++  L +    F         +  + +GGG   ++        
Sbjct: 7   VAGVTFQVPASCKDPQAYTHALSDARCIFDMGKELGFDMNILDIGGGFSGSEFQLKQVHS 66

Query: 215 CQ---RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDIS--ENIKNLVIVDSSVEAHV 269
                    F  +  V I  EPG   V +  TL   V+         +    D    +  
Sbjct: 67  VIRPLLEAYFPSESGVSIIAEPGNFFVFSCFTLAVNVIGKKAAYRNLHTSTHDKLTSSDA 126

Query: 270 PDYLLYQ----------------------ESATIYPNTGPYTAMVCGRSCLAGDIFGEFH 307
           P+++ Y                          ++  +   +++ + G SC   D   E  
Sbjct: 127 PEFVYYMNDGVYGSFMGRLFGNIISTPSVHKMSLTLDEPVFSSSLWGPSCDPLDQVVERC 186

Query: 308 FEKPVKIGDRISFEDVAG 325
               + +GD + F ++  
Sbjct: 187 LLPELAVGDWLVFSNMGA 204


>gi|195976673|dbj|BAG68575.1| arginine decarboxylase [Prunus persica]
          Length = 725

 Score = 57.1 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/236 (13%), Positives = 68/236 (28%), Gaps = 33/236 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +     L N L++               +  + +  +KC     + + + ++     
Sbjct: 112 PLIVRLPDVLKNRLESLQGAFDLAIQSHDYGSHYQGVFPVKCNQDRFVVEDIVRFGSPFR 171

Query: 54  -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109
            G  + S  E++L          E       +KD E  ++      +  NTV  L + ++
Sbjct: 172 FGLEAGSKPELLLAMSCLCKGNPEALLICNGFKDFEYISLALFARKLALNTVIVLEQEEE 231

Query: 110 KAQKLHKKIGLRINPSVSYSKFILADPNRPF-------SRLGEKCKDKIESEI------- 155
               +     L + P +     +    +  F        + G      +           
Sbjct: 232 LDVVIDLSKKLGVRPVIGARAKLKTKHSGHFGSTSGEKGKFGLTTTQILRVVKKLDQLGL 291

Query: 156 -KNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207
                 L FH   +  S        +    I  E       +++I +GGG+     
Sbjct: 292 LDCFQLLHFHIGSQIPSTALLADGVSEAAQIYCELVRLGAHMKFIDIGGGLGIDYD 347


>gi|225012423|ref|ZP_03702859.1| Orn/DAP/Arg decarboxylase 2 [Flavobacteria bacterium MS024-2A]
 gi|225003400|gb|EEG41374.1| Orn/DAP/Arg decarboxylase 2 [Flavobacteria bacterium MS024-2A]
          Length = 465

 Score = 57.1 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 48/407 (11%), Positives = 110/407 (27%), Gaps = 61/407 (14%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMDG 54
            TP  +    K+   +  A  + +                  K      + D   +    
Sbjct: 43  GTPLKVTYLPKISEKIKHAKALFQKTISALNYEGAYNYCYCTKSAHFSHILDEALKNDIH 102

Query: 55  TTSSSLYEVMLGHEKFGGETHA---YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK- 110
             +SS +++ +  +           + +         + +  + I     + +    +  
Sbjct: 103 IETSSAFDIEIVKKLKAQGKITQNTFVICNGFKRDQYIENIAELINSGDYNCIPIIDNYD 162

Query: 111 -------AQKLHKKIGLRINPSVSYSKFILADPNRPF--SRLGEKCKDKIESEIKNVNGL 161
                        +IG+RI                    + +    ++   +    +  L
Sbjct: 163 EIQLLDGQINRPFQIGIRIASEEEPKFEFYTSRLGIGYKNIVPFYKREIKTNPKLELKML 222

Query: 162 MFHNNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIH----------FTDKD 208
            F  N   K    +   L+       E       +  +++GGG            +    
Sbjct: 223 HFFINTGIKDNSYYWNELQKCLNVYVELKKNCHSLTDLNIGGGFPTKDSLGFDFDYEYMI 282

Query: 209 YPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVE 266
           + + +  Q +          I+ E G   V  +  +   VL   +        +++SS  
Sbjct: 283 FEIINLIQTVCNEGGVPVPNIFTEFGSYTVGESGAIFYEVLYQKQQNDREKWNMINSSFI 342

Query: 267 AHVPDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEF---------HFEK--P 311
             +PD     +   +      N      ++ G +C + D +             F +  P
Sbjct: 343 TTLPDSWAINKRFMMLPINHWNQPYERVLLGGLTCDSDDYYNNEQHVNAIYLPVFPQKKP 402

Query: 312 VKIGDRISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDGTIKA 353
           + IG    F +   Y  +    F G     I  P   + +   T + 
Sbjct: 403 LYIG----FFNTGAYQESLG-GFGGLQHCLIPQPKHILIHKTETGEL 444


>gi|46397625|gb|AAR00209.1| ornithine decarboxylase [Magnaporthe grisea]
          Length = 286

 Score = 57.1 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/284 (13%), Positives = 71/284 (25%), Gaps = 39/284 (13%)

Query: 54  GTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112
           G   +S  E+    +         Y    K       ++          +    +K    
Sbjct: 1   GFDCASKTEIEQVLDMGVNPARIIYAQPCKTNSYVRYVAGEGVRQMTFDNADELYKIAKL 60

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF 172
               ++ LRI    S S   L+          +           NV G+ FH        
Sbjct: 61  FPEAELYLRILTDDSSSLCRLSLKFGAALDATDGLLALARELGLNVVGVSFHVGSGASDP 120

Query: 173 LCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKD--FCQRLKEFSEKYSV 227
           L F   +++    F         ++ + +GGG    D    +         + FS    V
Sbjct: 121 LAFLNAVRDANFVFEQAAADGFDMKTLDVGGGFCSDDTFEAMAGVLRDALDEYFSPHRGV 180

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIK--------------NLVIVDSSVEAHVPDYL 273
            +  EPG   V+   T+   V+                      +V V+  +  +    +
Sbjct: 181 SLIAEPGRYFVSAAFTIACNVIARRTVEDPNGSVYGSLAAAASYMVYVNDGLYGNFRSIM 240

Query: 274 LYQESAT-------------------IYPNTGPYTAMVCGRSCL 298
              +                          +      + G +C 
Sbjct: 241 FDHQHPVAKVLRSSGNFFYNTTDADSPETPSEGIEYSIWGPTCD 284


>gi|169245576|gb|ACA50834.1| LysA [Agrobacterium tumefaciens]
 gi|169245578|gb|ACA50835.1| LysA [Agrobacterium tumefaciens]
 gi|169245582|gb|ACA50837.1| LysA [Agrobacterium tumefaciens]
 gi|169245584|gb|ACA50838.1| LysA [Agrobacterium tumefaciens]
 gi|169245586|gb|ACA50839.1| LysA [Agrobacterium tumefaciens]
 gi|169245588|gb|ACA50840.1| LysA [Agrobacterium tumefaciens]
 gi|169245590|gb|ACA50841.1| LysA [Agrobacterium tumefaciens]
 gi|169245592|gb|ACA50842.1| LysA [Agrobacterium tumefaciens]
          Length = 157

 Score = 56.7 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/153 (14%), Positives = 38/153 (24%), Gaps = 21/153 (13%)

Query: 190 ITQIEWISLGGGIHFTDKDY-----------PVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
              +E I LGGG+                   + D    ++         I +EPG  + 
Sbjct: 3   GRPLETIDLGGGLGIPYFAGETPLDLAAVSAAIPDLKALVQAHPLIADAHIIVEPGRFLA 62

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY----------LLYQESATIYPNTGPY 288
                    V  +  +     +V      H                   +  +       
Sbjct: 63  GPGGIYVAEVNSVKTSRGTTFVVTDGGMHHHLAASGNLGQIVKRNYPIVAPAMMQADYEE 122

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321
           TA + G  C   D          +K GD ++  
Sbjct: 123 TATIVGPLCTPLDTLARNAALPKLKAGDLLAIL 155


>gi|54778600|gb|AAV39553.1| ornithine decarboxylase [Oryza sativa Japonica Group]
          Length = 457

 Score = 56.7 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 47/167 (28%), Gaps = 7/167 (4%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVML 65
           + +ID  ++           +  GV+   A+KC     +   L     G   +S  E+  
Sbjct: 63  FNVIDLGEVARLFAAWWRGLR--GVRPYYAVKCNPNPALLGALAGLGAGFDCASRAEMEA 120

Query: 66  GHE-KFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                   +   Y      +     A     D   F++  ++ K K         + ++ 
Sbjct: 121 VLALGVAADRVVYANPCKLEPHLEYAAGVGVDLTTFDSEEEVGKIKRCHPGCRLLLRIKA 180

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN--VNGLMFHNNC 167
                    +L    +  +   E       +      V G+ FH   
Sbjct: 181 PDGDDGGGAMLNLGTKYGAHRDEVVPLLAAARRAGMAVVGVPFHAGS 227


>gi|268679913|ref|YP_003304344.1| arginine decarboxylase [Sulfurospirillum deleyianum DSM 6946]
 gi|268617944|gb|ACZ12309.1| arginine decarboxylase [Sulfurospirillum deleyianum DSM 6946]
          Length = 616

 Score = 56.7 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 39/300 (13%), Positives = 78/300 (26%), Gaps = 45/300 (15%)

Query: 12  QKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEV 63
           +++     +    ++    +     +  LK          L         G  + S  E+
Sbjct: 56  KQIRMIYKSFSDAKREFNYEGSFNAVYPLKVNQFPNFVKNLVSLGQKYNYGLEAGSKAEL 115

Query: 64  MLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNKFKDKA---QKL 114
           +L               +KD E+       A + +  T+    +++L      A      
Sbjct: 116 LLAMAYNNPNAPITVNGFKDNEMISLGFIAAEMGHNITLTIEGINELESIISIAKDRFGC 175

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNN 166
              IGLRI    S    I A      S+ G    + +E+               + FH  
Sbjct: 176 VPNIGLRIRLHSSGIG-IWAKSGGINSKFGLTSTELLEAVNMIRDANLLEKFTMIHFHIG 234

Query: 167 CENKSFLCFSAMLKNIEKEFGHFIT----QIEWISLGGGIHFTDKDYPVKDFCQR----- 217
            +          L+     +          +  I+LGGG+      +             
Sbjct: 235 SQITDIAPLKKALREAGNIYAELCRMGATNLRAINLGGGLAVEYSQHKTTLHKNYSLSEY 294

Query: 218 ----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA 267
                     +          I++E G  +  +   L   VL++         +      
Sbjct: 295 ANDVVYLLKDIANRKNVSEPDIFIESGRFVAAHHAVLVAPVLELFSQEYTDQKLHLKENN 354


>gi|126664242|ref|ZP_01735234.1| arginine decarboxylase, biosynthetic [Flavobacteria bacterium
           BAL38]
 gi|126623774|gb|EAZ94470.1| arginine decarboxylase, biosynthetic [Flavobacteria bacterium
           BAL38]
          Length = 469

 Score = 56.7 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 52/408 (12%), Positives = 115/408 (28%), Gaps = 63/408 (15%)

Query: 3   KTPY-YLIDKQKLLNNLDT----ALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYMD 53
            TP  +     K+  N++          +  G +         K      + +   +   
Sbjct: 42  GTPLKFTY-LPKISQNINRAKMWFRNSMEKHGYEAKYFYCYCTKSSHFEFILNEALKNNI 100

Query: 54  GTTSSSLY-----EVMLGHEKFGGETHAYNVAYKDCEI----DAVLSNCDTIIFNTVSQL 104
              +SS +     E ++   K    +      +K  +       +++N        +   
Sbjct: 101 HIETSSAFDIDIVENLMAQGKINKNSFVVCNGFKRAQYVTNIARLINNGHKNTIPVIDNF 160

Query: 105 NKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF----SRLGEKCKDKIESEIKNVNG 160
            +     +++  K  + I  +           +R        L    K   +++   +  
Sbjct: 161 EELDLLQEEIDGKFKIGIRIAAEEEPKFEFYTSRLGIGYKDILPFYRKQIADNKKVELKM 220

Query: 161 LMFHNNCENKSFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIH----------FTDK 207
           L F  N   +    +         +          ++ +++GGG            +   
Sbjct: 221 LHFFINAGIRDTAYYWNELLKCMKVYIALKKECPSLDSLNIGGGFPIKNSLAFDYDYQYM 280

Query: 208 DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSV 265
              + +  +   + +E     I+ E G   V         VL      + +N  ++DSS 
Sbjct: 281 VDEILNQIKIACDDAEVEVPHIFTEFGSFTVGEAGGALYQVLYQKKQNDRENWNMIDSSF 340

Query: 266 EAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDI-----------FGEFHFEK 310
              +PD     +     A    N      ++ G +C   D              +++ EK
Sbjct: 341 ITTLPDTWAINKRFVMMAVNRWNDTYERVLLGGLTCDGDDYYNSEQHMNAVYLPKYNKEK 400

Query: 311 PVKIGDRISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDGTIKA 353
           P+ IG    F +   Y       F G     +  P   + + D     
Sbjct: 401 PLYIG----FFNTGAYQETIG-GFGGLSHCILPQPKHILIDKDKNGII 443


>gi|95929080|ref|ZP_01311825.1| arginine decarboxylase [Desulfuromonas acetoxidans DSM 684]
 gi|95134981|gb|EAT16635.1| arginine decarboxylase [Desulfuromonas acetoxidans DSM 684]
          Length = 632

 Score = 56.7 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 42/359 (11%), Positives = 97/359 (27%), Gaps = 56/359 (15%)

Query: 11  KQKLLNNL----DTALYIRKNAGVKLLL----ALKCFAAWGMFDTLNQYMD----GTTSS 58
           +  L + +    +T       AG +        +K      + + + ++      G  + 
Sbjct: 71  ENLLQSRIVYLNETFRGAIAAAGYQGRYRGVFPVKVNQQCQIIEEICRFGAPYQHGLEAG 130

Query: 59  SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQ 112
           S  E++L               YKD E   +             +  + ++L    +++ 
Sbjct: 131 SKAELVLALANLTPGGLLVLNGYKDREFIDLGLWAHKLGHPCFFVIESPAELELLIERSH 190

Query: 113 KLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKI--------ESEIKNVNGLMF 163
           +L+ +  +     +S     +  + +   S  G      +           I  +  L  
Sbjct: 191 QLNVRPHIGARIKISTQVSGMWTETSGDRSSFGLSSTQLLAMVETLQAAEMIDCLEMLHC 250

Query: 164 HNNCENKSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDK----------DYP 210
           H   +          ++   +           + ++ LGGG+               +Y 
Sbjct: 251 HLGSQIPCLEDIGRGVEEACRYYINLCREGAPMGYLDLGGGLAVDYSGRCSGDGHSRNYS 310

Query: 211 VKDFCQRLKEFSEKY-------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD- 262
           ++D+CQ +                 I  E G A V  ++ L   +LD+     + +    
Sbjct: 311 LEDYCQAIVTTIAATLDNTGIAHPHIVTESGRATVAYSSMLLFNILDVMHFEADPLPQPF 370

Query: 263 --------SSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVK 313
                               +     +            G+  L     GE  F    +
Sbjct: 371 PANEAEILQEQHRFFTTLNGHDYHQAVILRDRMRQQFRDGQLSLRQRTLGENLFLATAQ 429


>gi|125595934|gb|EAZ35714.1| hypothetical protein OsJ_20004 [Oryza sativa Japonica Group]
          Length = 651

 Score = 56.7 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 75/262 (28%), Gaps = 30/262 (11%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGV----KLLLALKCFAAWGMFDTLNQYM----DGTTS 57
           +++ D   +        Y  ++ G     + +  +KC     + + + ++      G  +
Sbjct: 65  FFVNDDGDVAALNAAFDYAVRSTGYGGRYQGVYPVKCNQDRHVVEDIVEFGEPFRFGLEA 124

Query: 58  SSLYEVMLGH----EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
            S  E++L       +   +       YKD E  ++     T+  NTV  L + ++    
Sbjct: 125 GSKPELLLAMSCLAARGNPDALLICNGYKDDEYVSLALIARTMGLNTVIVLEQEEELDIV 184

Query: 114 LHKKIGLRINPSVSY-------SKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158
           +     L + P V                 +    + G      +           +  +
Sbjct: 185 VDASRRLGVRPVVGMRAKLRTKHAGHFGSTSGEKGKFGLNAAQILSVVAKLKTLGMLDCL 244

Query: 159 NGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
             L FH   +  +             I  E       +  I +GGG+             
Sbjct: 245 QLLHFHIGSQIPTTALLGDGVGEAAQIYCELARLGAAMRVIDVGGGLGIDYDGSHSAQTD 304

Query: 216 QRLKEFSEKYSVQIYLEPGEAI 237
             +    E+Y+  +    G   
Sbjct: 305 MSVAYSLEEYAAAVVAAVGRVC 326


>gi|126695386|ref|YP_001090272.1| arginine decarboxylase [Prochlorococcus marinus str. MIT 9301]
 gi|166220850|sp|A3PA96|SPEA_PROM0 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|126542429|gb|ABO16671.1| Orn/DAP/Arg decarboxylases family 2 [Prochlorococcus marinus str.
           MIT 9301]
          Length = 648

 Score = 56.7 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 42/313 (13%), Positives = 94/313 (30%), Gaps = 48/313 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAG--------VKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +     L + ++        A          + +  +KC     + + +  +     
Sbjct: 69  PLIIRFNDILKDRINALHDSFFKAIKTYKYKNIYQGVFPVKCNQQKNVLEKIIDFGSQWN 128

Query: 54  -GTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCD------TIIFNTVSQLN 105
            G    S  E+++G        +      YKD +   + +          I+     ++ 
Sbjct: 129 FGLEVGSKSELLIGLALLENHNSLLICNGYKDKKYIEIATLARKLGKNPIIVIEQRDEVK 188

Query: 106 KFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKI--------ESEIK 156
           +     Q+L+    + I   +S              S+ G    + +         + I 
Sbjct: 189 RIIQAVQELNATPLIGIRAKLSSKSSGRWGKSIGDNSKFGLSIPEIMLTIKELKEANLIN 248

Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDK------ 207
            +  L FH   +          L+   +   E       +++I +GGG+           
Sbjct: 249 EMKLLHFHIGSQISDIAVIKDALQEASQIYVELCKLGAPMQYIDVGGGLGIDFDGTKTSS 308

Query: 208 ----DYPVKDFCQRLKEFSEK-------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
               +Y ++++   +    +            I  E G AI+++ + L   VL  S    
Sbjct: 309 NTSTNYSLQNYANDVIATIKDSCELNNIKHPTIISESGRAIISHCSVLIFNVLGTSHVSS 368

Query: 257 NLVIVDSSVEAHV 269
            L I D   +  +
Sbjct: 369 KLQIFDKKNQQLI 381


>gi|54295989|ref|YP_122358.1| arginine decarboxylase [Legionella pneumophila str. Paris]
 gi|53749774|emb|CAH11154.1| hypothetical protein lpp0006 [Legionella pneumophila str. Paris]
          Length = 630

 Score = 56.7 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 42/330 (12%), Positives = 94/330 (28%), Gaps = 47/330 (14%)

Query: 12  QKLLNNLDTALYIRKNA----GVKLLLALKCFAAWGMFDTLNQYMD---GTTSSSLYEVM 64
            ++          R++       +L+  +K      +   L +  D   G  + S  E+M
Sbjct: 69  DRVHRIYQAFTQAREDTYYAGNYQLVYPIKVNQEQSVVRELLKSPDNQIGLEAGSKPELM 128

Query: 65  LGHEKFGGETHAY-NVAYKDCEIDAV------LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
                 G          YKD            + +   I+    S+L+    ++ +L  K
Sbjct: 129 AVIGMLGDHQSTIVCNGYKDTSYIRTALIAQQMGHKVFIVIEKKSELDIILKESARLQIK 188

Query: 118 IGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKI--------ESEIKNVNGLMFHNNCE 168
             L +    VS S     +     S+ G   K  +           +  +  +  H   +
Sbjct: 189 PTLGVRIRLVSKSAGKWENTGGVKSKFGLNAKQVLELILQLKANDMLDCLQLMHCHLGSQ 248

Query: 169 NKSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDK----------DYPVKDFC 215
             +       ++ + +           I  I +GGG+    +          +Y + ++ 
Sbjct: 249 IANIHDIRHCMQEVARYYIELRQLNAPISTIDVGGGLSVDYEGTRSNKGCSMNYSLVEYA 308

Query: 216 QRLKEFSEKYSV-------QIYLEPGEAIVTNTTTLNTTVLDISENIKNL--VIVDSSVE 266
             +    +            +  E G A+  +   L + + D+    K      +     
Sbjct: 309 THIMLALKHLCQEAEIPEPDLISESGRALTAHHAVLVSNITDVEIINKAPVLPEISEDDS 368

Query: 267 AHVPDYLLYQESATIYPNTGPYTAMVCGRS 296
             + D  +Y     I  ++          S
Sbjct: 369 HVIRD--IYDTYQAITDSSPTEIYNYAAHS 396


>gi|169245558|gb|ACA50825.1| LysA [Agrobacterium tumefaciens]
 gi|169245566|gb|ACA50829.1| LysA [Agrobacterium tumefaciens]
          Length = 157

 Score = 56.7 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/153 (13%), Positives = 36/153 (23%), Gaps = 21/153 (13%)

Query: 190 ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY-----------LEPGEAIV 238
              +E I LGGG+               +          ++           +EPG  + 
Sbjct: 3   GRPLETIDLGGGLGIPYFAGETPLDLAAVSAAIPDLKALMHAHPLIANAHIIVEPGRFLA 62

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY----------LLYQESATIYPNTGPY 288
                    V  +  +     +V      H                   +  +       
Sbjct: 63  GPGGIYVAEVNSVKTSRGTTFVVTDGGMHHHLAASGNLGQIVKRNYPIVAPAMMQADNEE 122

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321
           TA + G  C   D          +K GD ++  
Sbjct: 123 TATIVGPLCTPLDTLARNAALPKLKAGDLLAIL 155


>gi|254447620|ref|ZP_05061086.1| arginine decarboxylase [gamma proteobacterium HTCC5015]
 gi|198262963|gb|EDY87242.1| arginine decarboxylase [gamma proteobacterium HTCC5015]
          Length = 633

 Score = 56.7 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/297 (10%), Positives = 75/297 (25%), Gaps = 45/297 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIR--------KNAGVKLLLALKCFAAWGMFDTL--NQYMDG 54
           P  +     L + ++                     +  +K      + + L       G
Sbjct: 66  PVLVRFNDILRDRVERLYQAFCHALTQREMAPHYTPIYPIKVNQQASVVEALLKADAPLG 125

Query: 55  TTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLN------KFK 108
             + S  E+                 YKD E   +      +       +          
Sbjct: 126 LEAGSKAELAAVIASAPAGATIICNGYKDREYIRMALIAKHMGHACYLVIEQSSELTLVN 185

Query: 109 DKAQKLHKKIGLRINPSVSYSKF-ILADPNRPFSRLGEKCKDK--------IESEIKNVN 159
           + +++L     L +   ++        +      + G    +           S+++ + 
Sbjct: 186 EVSRQLDIAPLLGLRIRLATLGTGRWQNSGGEGGKFGLTAAEAYRLIEDLKQSSQLECLK 245

Query: 160 GLMFHNNCEN---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--------- 207
            L  H   +     +       +     +       ++ + +GGG+    +         
Sbjct: 246 LLHVHMGSQIAELSAIEQGVREICQFYADLCALGAPLDTLDIGGGLGVDYEGSANHSEFS 305

Query: 208 -DYPVKDFCQRLKEFSEK-------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
             Y +  + + +                Q++ E G A+  +   L T V DI     
Sbjct: 306 MGYTLSGYAEAVVATVHGAMQSARLPMPQLFSESGRALTAHHAVLLTEVGDIESPFN 362


>gi|218883962|ref|YP_002428344.1| Orn/DAP/Arg decarboxylase 2 [Desulfurococcus kamchatkensis 1221n]
 gi|218765578|gb|ACL10977.1| Orn/DAP/Arg decarboxylase 2 [Desulfurococcus kamchatkensis 1221n]
          Length = 592

 Score = 56.7 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 48/281 (17%), Positives = 84/281 (29%), Gaps = 41/281 (14%)

Query: 11  KQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSSLYE 62
           ++ +    +    + K  G K     +  +K      + D + +Y      G  + SL E
Sbjct: 71  ERAIRTVYEAFTELAKVHGFKGSLQPVFPMKVNPIEVVIDAIWRYGEKYKWGFNTGSLGE 130

Query: 63  VMLGHEKF--GGETHAYNVAYKDCEIDA-----VLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           + L  +    GG    Y+    D  +              I   +   L+     ++   
Sbjct: 131 LELLSKYLEKGGRILIYDGVVSDSVMKILVRFKENGWRVIIDVESEHDLDIL---SKYPE 187

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK--IESEIKNVN----GLMFHNNCEN 169
            +IGLRI P         A       + G        +  E K +      L  H   + 
Sbjct: 188 FEIGLRIKPLFRPGG-KWAHSAGLEGKFGLTVNTLVKLREEYKWIEERGRLLHIHPGSQI 246

Query: 170 KSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKDY-------PVKDFCQRL 218
             +    A +  +   F     H    IE + LGGG+ +   D        P     +  
Sbjct: 247 YKWSDMEAFINEVYNIFTQLQSHGFPSIEIVDLGGGLAYPYLDTRDGTIESPDYGLIEYF 306

Query: 219 KEFSE-----KYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254
               +     +    +  E G  IV+    L   V+DI   
Sbjct: 307 NHILKIFSRLEKHPTLVYEGGRYIVSAHRILVAKVVDIRPY 347


>gi|123967583|ref|YP_001008441.1| arginine decarboxylase [Prochlorococcus marinus str. AS9601]
 gi|166220853|sp|A2BNH3|SPEA_PROMS RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|123197693|gb|ABM69334.1| Orn/DAP/Arg decarboxylases family 2 [Prochlorococcus marinus str.
           AS9601]
          Length = 648

 Score = 56.7 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 42/313 (13%), Positives = 94/313 (30%), Gaps = 48/313 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAG--------VKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +     L + ++        A          + +  +KC     + + + ++     
Sbjct: 69  PLIIRFNDILKDRINALHDSFLKAIKTYKYKNIYQGVFPVKCNQQKNVLEKIIEFGSQWN 128

Query: 54  -GTTSSSLYEVMLGHEKFGG-ETHAYNVAYKDCEIDAVLSNCD------TIIFNTVSQLN 105
            G    S  E+++G        +      YKD +   + +          I+     ++ 
Sbjct: 129 FGLEVGSKSELLIGLALLENQNSLLICNGYKDKKYIEIATLARKLGKNPIIVIEQRDEVK 188

Query: 106 KFKDKAQKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKI--------ESEIK 156
           +     Q+L     + I   +S              S+ G    + +         + I 
Sbjct: 189 RIIQAVQELKATPLIGIRAKLSSKSSGRWGKSIGDNSKFGLSIPEIMLTIKELKEANLIN 248

Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDK------ 207
            +  L FH   +          L+   +   E       +++I +GGG+           
Sbjct: 249 EMKLLHFHIGSQISDIAVIKDALQEASQIYVELCKLGAPMQYIDVGGGLGIDFDGTKTSS 308

Query: 208 ----DYPVKDFCQRLKEFSEK-------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
               +Y ++++   +    +            I  E G AI+++ + L   VL  S    
Sbjct: 309 NTSTNYSLQNYANDVIATIKDSCELNNIKHPTIISESGRAIISHCSVLIFNVLGTSHVSS 368

Query: 257 NLVIVDSSVEAHV 269
            L I D   +  +
Sbjct: 369 KLQIFDKKNQQLI 381


>gi|332143282|ref|YP_004429020.1| arginine decarboxylase [Alteromonas macleodii str. 'Deep ecotype']
 gi|327553304|gb|AEB00023.1| arginine decarboxylase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 639

 Score = 56.7 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/313 (9%), Positives = 93/313 (29%), Gaps = 48/313 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L + +       ++A          + +  +K      + + +        
Sbjct: 64  PVVVRFHDILRSQVAGLNKAFRHAIEEAEYQGQYQGVYPVKVNQMREVVEEIVDAGKPYN 123

Query: 53  DGTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLN 105
            G  + S  E++         E+      YKD E+  +      +      +    ++L 
Sbjct: 124 YGLEAGSKAELLTVLAMNTNEESLTILNGYKDDEVMRLALLGRKLGRRVVVVVEKFTELL 183

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------K 156
                A++L  +  + +   ++       + +     + G    + I +           
Sbjct: 184 LLVKTAKELGIEPIIGVRSKMTVKGRGKWESSGGERAKFGLTITEIINAARYLEEQGMAH 243

Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------ 207
            +  L FH   +    ++          I  +       ++++ +GGG+           
Sbjct: 244 CLKLLHFHIGSQLTDIRAVKEAVTEGARIYADLHKMGFALDYVDVGGGLGIDYDGSNSTN 303

Query: 208 ----DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
               +Y ++++   +    ++           +  E G AI  + + + T ++   +   
Sbjct: 304 ESSRNYSMQEYVADVVYGMKEMCDLEGVPHPHLVSESGRAITAHHSCVITEIVGEIKTNA 363

Query: 257 NLVIVDSSVEAHV 269
             +   ++   H 
Sbjct: 364 AQMDTSATEGEHF 376


>gi|325108714|ref|YP_004269782.1| arginine decarboxylase [Planctomyces brasiliensis DSM 5305]
 gi|324968982|gb|ADY59760.1| arginine decarboxylase [Planctomyces brasiliensis DSM 5305]
          Length = 653

 Score = 56.7 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/279 (11%), Positives = 77/279 (27%), Gaps = 44/279 (15%)

Query: 19  DTALYIRKNAGVKLLL----ALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLGHEKF 70
           +      ++A  +        +K      +   + +       G  + S  E+++     
Sbjct: 99  EAFRAAIEDANYRGTYRGVFPIKVNQQSHVIAEIARVGERFSHGLEAGSKAELLIAMSTL 158

Query: 71  -GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLN------KFKDKAQKLHKKIGLRIN 123
              +       YKD E   +      I F     L          ++A+    +  + + 
Sbjct: 159 RSKDCLIVCNGYKDEEFIDLGLQARKIGFECFFVLETVKELSIILERAKHWDVEPLIGVR 218

Query: 124 PSVSYS-KFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLMFHNNCE---NKS 171
             +S       ++ +   S  G      +E        + +  +  L FH   +    ++
Sbjct: 219 VKLSTKVDGHWSNDSGDRSMFGLTTMQIVEVVDRLKEANMLHCLQLLHFHLGSQIPNIRN 278

Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--------------DYPVKDFCQR 217
                        +  +    + + +LGGG+                   +    D  + 
Sbjct: 279 IRDGVTEACRYYMDLVNDGAPMGYFNLGGGLAVDYDGSASTHMHSRNYDLNEYCVDIVET 338

Query: 218 LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISE 253
           L    + +      I  E G   V   + L   +L +S 
Sbjct: 339 LMNNLDAHEIEHPTIITESGRWTVAPMSVLLFNILSVSH 377


>gi|255543883|ref|XP_002513004.1| arginine decarboxylase, putative [Ricinus communis]
 gi|223548015|gb|EEF49507.1| arginine decarboxylase, putative [Ricinus communis]
          Length = 724

 Score = 56.7 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/229 (11%), Positives = 64/229 (27%), Gaps = 33/229 (14%)

Query: 12  QKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSS 59
             L N L++              ++  + +  +KC     + + + ++      G  + S
Sbjct: 122 DILKNRLESLQSAFNFAIQSQGYDSHYQGVYPVKCNQDRFVVEDIVRFGSPFRFGLEAGS 181

Query: 60  LYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKFKDK 110
             E++L          +       +KD E  ++            I+     +L+     
Sbjct: 182 KPELLLAMSCLCKGSPDALLVCNGFKDGEYISLALLARKLALNTVIVLEQEEELDLVIGL 241

Query: 111 AQKLHKKIGLRINPSVSY-SKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGL 161
           ++K+  +  + +   +           +    + G      +              +  L
Sbjct: 242 SKKMSVRPVIGVRAKLRTRHSGHFGSTSGEKGKFGLTTIQILRVVKKLEEAGMLDCLQLL 301

Query: 162 MFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207
            FH   +  S             I  E       ++ I +GGG+     
Sbjct: 302 HFHIGSQIPSTSLLADGVGEAAQIYCELVRLGANMQVIDIGGGLGIDYD 350


>gi|283954332|ref|ZP_06371853.1| biosynthetic arginine decarboxylase [Campylobacter jejuni subsp.
           jejuni 414]
 gi|283794131|gb|EFC32879.1| biosynthetic arginine decarboxylase [Campylobacter jejuni subsp.
           jejuni 414]
          Length = 610

 Score = 56.7 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 52/289 (17%), Positives = 88/289 (30%), Gaps = 45/289 (15%)

Query: 12  QKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEV 63
           +++ N        RK  G K     +  LK     G    L +       G  + S  E+
Sbjct: 56  KQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAEL 115

Query: 64  MLGHEKFGGETHAYNVAYKDC------EIDAVLSNCDTIIFNTVSQLNKFKDKA---QKL 114
           +L               +KD        I A + +  T+    +++L    D A    K 
Sbjct: 116 LLAMAYNNEGAPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKP 175

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNN 166
              IGLR+    S    I A     +S+ G    + IE+          +    + FH  
Sbjct: 176 KPNIGLRVRL-HSAGVGIWAKSGGIYSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLG 234

Query: 167 CENKSFLCFSAMLKN---IEKEFGHFI-TQIEWISLGGGIHFTDKDY------------- 209
            +          L     I  E        ++ I+LGGG+      +             
Sbjct: 235 SQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNEKNRNYTLREY 294

Query: 210 --PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
              V    + + E  +     I++E G  +  N   L   VL++     
Sbjct: 295 ANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEY 343


>gi|3360275|gb|AAC27892.1| ornithine decarboxylase [Haemonchus contortus]
          Length = 110

 Score = 56.7 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 30/93 (32%), Gaps = 3/93 (3%)

Query: 33  LLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEID--AV 89
             A+KC     +  TL     G   +S  E+ +  +     E   Y    K       A 
Sbjct: 1   FYAVKCNTDRVLVRTLAALGTGFDCASREEIDIVMDLGVSAERIVYANPCKTRSFITHAK 60

Query: 90  LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
             N   + F++  +L K      +    + + +
Sbjct: 61  ERNVSMMTFDSAEELAKVAQLHPQAKMILRIAV 93


>gi|169245564|gb|ACA50828.1| LysA [Agrobacterium tumefaciens str. C58]
          Length = 157

 Score = 56.7 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 22/153 (14%), Positives = 37/153 (24%), Gaps = 21/153 (13%)

Query: 190 ITQIEWISLGGGIHFTDKDY-----------PVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
              +E I LGGG+                   + D    LK         + +EPG  + 
Sbjct: 3   GKPLETIDLGGGLGIPYFAGETSLDLAKVAAAIPDLKALLKAHPLIADAHVIVEPGRFLA 62

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY----------LLYQESATIYPNTGPY 288
                    V  +  +     +V      H                   +  +       
Sbjct: 63  GPGGLYVVEVNSVKTSRGTTFVVTDGGMHHHLAASGNLGQIVKRNYPIVAPAMMQAAHDE 122

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321
           TA + G  C   D          +  GD ++  
Sbjct: 123 TATIVGPLCTPLDTLARNATLPKLNAGDLLAIL 155


>gi|255322191|ref|ZP_05363337.1| arginine decarboxylase [Campylobacter showae RM3277]
 gi|255300564|gb|EET79835.1| arginine decarboxylase [Campylobacter showae RM3277]
          Length = 611

 Score = 56.3 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 48/289 (16%), Positives = 85/289 (29%), Gaps = 45/289 (15%)

Query: 12  QKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTL----NQYMDGTTSSSLYEV 63
           +++     +    +   G K     +  LK     G    L     +Y  G  + S  E+
Sbjct: 57  KQISQIYKSFESAKNEFGYKGSFNAVYPLKVNQYPGFVKNLVRHGQKYGYGLEAGSKAEL 116

Query: 64  MLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNKFKDKA---QKL 114
           +L               +KD E+       A + +  T+    +++L      A      
Sbjct: 117 LLVMAYNNEGAPITVNGFKDKEMINIGFIAAEMGHNITLTIEGLNELEAIIAIAKERFTP 176

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNN 166
              IGLRI    S    I A      S+ G    + IE+             N + FH  
Sbjct: 177 KPNIGLRIRL-HSSGSGIWAKSGGINSKFGLTATELIEAVNLLKEANLLDRFNMIHFHIG 235

Query: 167 CENKSFLCFS---AMLKNIEKEFGHFI-TQIEWISLGGGIHFTDKDY------------- 209
            +               NI  E        ++ I+LGGG+      +             
Sbjct: 236 SQITEIHPLKKALIEAGNIYAELRKMGAKNLKAINLGGGLAIEYSQFKENSSRNYTLSEY 295

Query: 210 --PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
              V    + +     +    I++E G  +  +   L   VL++     
Sbjct: 296 ANDVVYLLKTMATQRNEVEPDIFIESGRFVSASHAVLVAPVLELFSQDY 344


>gi|169245556|gb|ACA50824.1| LysA [Agrobacterium tumefaciens]
 gi|169245560|gb|ACA50826.1| LysA [Agrobacterium tumefaciens]
 gi|169245580|gb|ACA50836.1| LysA [Agrobacterium tumefaciens]
          Length = 157

 Score = 56.3 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 20/153 (13%), Positives = 36/153 (23%), Gaps = 21/153 (13%)

Query: 190 ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY-----------LEPGEAIV 238
              +E I LGGG+               +          ++           +EPG  + 
Sbjct: 3   GRPLETIDLGGGLGIPYFAGETPLDLAAVSAAISDLKALMHAHPLIANAHIIVEPGRFLA 62

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY----------LLYQESATIYPNTGPY 288
                    V  +  +     +V      H                   +  +       
Sbjct: 63  GPGGIYVAEVNSVKTSRGTTFVVTDGGMHHHLAASGNLGQIVKRNYPIVAPAMMQADYEE 122

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321
           TA + G  C   D          +K GD ++  
Sbjct: 123 TATIVGPLCTPLDTLARNAALPKLKAGDLLAIL 155


>gi|72383214|ref|YP_292569.1| arginine decarboxylase [Prochlorococcus marinus str. NATL2A]
 gi|72003064|gb|AAZ58866.1| arginine decarboxylase [Prochlorococcus marinus str. NATL2A]
          Length = 647

 Score = 56.3 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/294 (11%), Positives = 85/294 (28%), Gaps = 48/294 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52
           P  +     L + L       + A          + +  +KC     + + L    +++ 
Sbjct: 68  PLLIRFDDILEDCLKNLHKAFEKAINDYQYQGKYQGVFPIKCNQQRHVVEELITCGSKWN 127

Query: 53  DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCD------TIIFNTVSQLN 105
            G  + S  E+++        +       YKD                  ++    + + 
Sbjct: 128 FGLEAGSKPELLIALSILEDPKALLICNGYKDQRYIETAILARQLGRQPIVVIEQANDVE 187

Query: 106 KFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIES--------EIK 156
                +  L     + I     S S    +      S+ G    + +++         + 
Sbjct: 188 LIIKSSNLLGASPLIGIRAKLSSQSSGRWSSSIGDKSKFGLSIPEILKAIKRLKEANLLN 247

Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK------ 207
            +  L FH   +          L+   + +         + ++ +GGG+           
Sbjct: 248 ELKLLHFHLGSQINDIGVLKDALQEAGQIYAELINLGAPMGYLDVGGGLGIDYDGSQTAS 307

Query: 208 ----DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLD 250
               +Y ++++   +    ++           +  E G AI ++ + L   +L 
Sbjct: 308 IASTNYSLQNYANDVVATIKECCESKKIPLPTLITESGRAIASHFSILIFNILG 361


>gi|56460321|ref|YP_155602.1| arginine decarboxylase [Idiomarina loihiensis L2TR]
 gi|56179331|gb|AAV82053.1| Arginine decarboxylase [Idiomarina loihiensis L2TR]
          Length = 636

 Score = 56.3 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/333 (10%), Positives = 90/333 (27%), Gaps = 49/333 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIR----KNAGVKLLL----ALKCFAAWGMFDTLNQYMD--- 53
           P  +     L + ++          + A  +        +K      + + +    +   
Sbjct: 61  PAVIRFHDILRSQVEIINETFGKQIEEANYQGQYCGVFPIKVNQMREVVEEIMDAGEPYN 120

Query: 54  -GTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCD------TIIFNTVSQLN 105
            G  + S  E+M         E       YKD +   +            I+    S+L 
Sbjct: 121 YGLEAGSKPELMAVMAYNDNPEALTILNGYKDKDYLTLALLGRQLKRKMIIVIEKFSELE 180

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIK 156
                A+++  K  + +   +          +     + G    + +           + 
Sbjct: 181 MLIPLAKQMGVKPMIGLRSKMMVKSSGKWAGSSGDRAKFGLSIAEILNVIERLREEDMLH 240

Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDY---- 209
               L FH   +          +    + +         +E++ +GGG+           
Sbjct: 241 CAKLLHFHIGSQLSDIRKIKEAVNEGARLYAKLVLEGMPLEYLDIGGGLGIDYDGTSTTN 300

Query: 210 -------------PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                         V    +++ +  +     +  E G A+  + + + T ++   +   
Sbjct: 301 DSSRNYSTEEYVADVVWGVKQICDLEKVPHPNLVSESGRAMTAHHSCVVTNIVGEMKPAG 360

Query: 257 NLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT 289
               + +S + H+      +E  +      P  
Sbjct: 361 TQYDISASSDEHIL-VKNMRELHSSGDQFHPQE 392


>gi|291297208|ref|YP_003508606.1| arginine decarboxylase [Meiothermus ruber DSM 1279]
 gi|290472167|gb|ADD29586.1| arginine decarboxylase [Meiothermus ruber DSM 1279]
          Length = 647

 Score = 56.3 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 32/284 (11%), Positives = 77/284 (27%), Gaps = 43/284 (15%)

Query: 12  QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLGH 67
           +     +    Y     G   L  +K      + +T+ +       G  + S  E+ L  
Sbjct: 98  EAFRRAIKKYHYNASYQG---LFPVKVNQRRMVVETVARAGKPFAYGLEAGSKAELALIL 154

Query: 68  E-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSV 126
                 E+      +KD +   +      +  N V  L KF +  + +     + + P +
Sbjct: 155 AQDLHPESIIACNGFKDDDFIRLALMGKKLGRNVVVTLEKFAELGRVIRIAKEIGVEPQI 214

Query: 127 SYS-------KFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCE--- 168
                          +     ++ G    + I++            +  L  H   +   
Sbjct: 215 GIRYKLKTKGSGAWEESGGEAAKFGFTTPEIIKAVDMLAEAGLLGTIAMLHSHIGSQVTD 274

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK-----------------DYPV 211
            +        +     +       + +++LGGG+                         +
Sbjct: 275 IRRIKQAVREIAQTYVQLRKLGAPVRYLNLGGGLAVDYDGSKTAFYASANYTLEEYAEDL 334

Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENI 255
               + + +   +    +  E G A+    + L   V+D     
Sbjct: 335 VYVTKEICDGHGEPHPILVTESGRAVTAYHSVLVLEVIDTIRPP 378


>gi|307608756|emb|CBW98138.1| hypothetical protein LPW_00051 [Legionella pneumophila 130b]
          Length = 630

 Score = 56.3 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 43/330 (13%), Positives = 94/330 (28%), Gaps = 47/330 (14%)

Query: 12  QKLLNNLDTALYIRKNA----GVKLLLALKCFAAWGMFDTLNQYMD---GTTSSSLYEVM 64
            ++          R++       +L+  +K      +   L +  D   G  + S  E+M
Sbjct: 69  DRVHRIYQAFTQAREDTYYAGNYQLVYPIKVNQEQSVVRELLKSPDNQIGLEAGSKPELM 128

Query: 65  LGHEKFGGETHAY-NVAYKDCEIDAV------LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
                 G          YKD            + +   I+    S+L+    ++ +L  K
Sbjct: 129 AVIGMLGDHQSTIVCNGYKDTSYIRTALIAQQMGHKVFIVIEKKSELDIILKESARLQIK 188

Query: 118 IGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKI--------ESEIKNVNGLMFHNNCE 168
             L +    VS S     +     S+ G   K  +           +  +  +  H   +
Sbjct: 189 PTLGVRIRLVSKSAGKWENTGGVKSKFGLNAKQVLELILQLKANDMLDCLQLMHCHLGSQ 248

Query: 169 NKSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDK----------DYPVKDFC 215
             +       ++ + +           I  I +GGG+    +          +Y + ++ 
Sbjct: 249 IANIHDIRHCMQEVARYYIELRQLNAPIGTIDVGGGLSVDYEGTRSNKGCSMNYSLVEYA 308

Query: 216 QRLKEFSEKYSV-------QIYLEPGEAIVTNTTTLNTTVLDISENIKNL--VIVDSSVE 266
             +    +            I  E G A+  +   L + + D+    K      +     
Sbjct: 309 THIMLALKHLCQEAEISEPDIISESGRALTAHHAVLISNITDVEIINKAPVLPEISEDDS 368

Query: 267 AHVPDYLLYQESATIYPNTGPYTAMVCGRS 296
             + D  +Y     I  ++          S
Sbjct: 369 HVIRD--IYDTYQAITDSSPTEIYNYAAHS 396


>gi|54292970|ref|YP_125385.1| arginine decarboxylase [Legionella pneumophila str. Lens]
 gi|53752802|emb|CAH14236.1| hypothetical protein lpl0006 [Legionella pneumophila str. Lens]
          Length = 630

 Score = 56.3 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 42/330 (12%), Positives = 94/330 (28%), Gaps = 47/330 (14%)

Query: 12  QKLLNNLDTALYIRKNA----GVKLLLALKCFAAWGMFDTLNQYMD---GTTSSSLYEVM 64
            ++          R++       +L+  +K      +   L +  D   G  + S  E+M
Sbjct: 69  DRVHRIYQAFTQAREDTYYAGNYQLVYPIKVNQEQSVVRELLKSPDNQIGLEAGSKPELM 128

Query: 65  LGHEKFGGETHAY-NVAYKDCEIDAV------LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
                 G          YKD            + +   I+    S+L+    ++ +L  K
Sbjct: 129 AVIGMLGDHQSTIVCNGYKDTSYIRTALIAQQMGHKVFIVIEKKSELDIILKESARLQIK 188

Query: 118 IGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKI--------ESEIKNVNGLMFHNNCE 168
             L +    VS S     +     S+ G   K  +           +  +  +  H   +
Sbjct: 189 PTLGVRIRLVSKSAGKWENTGGVKSKFGLNAKQVLELILQLKANDMLDCLQLMHCHLGSQ 248

Query: 169 NKSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDK----------DYPVKDFC 215
             +       ++ + +           I  I +GGG+    +          +Y + ++ 
Sbjct: 249 IANIHDIRHCMQEVARYYIELRQLNAPIGTIDVGGGLSVDYEGTRSNKGCSMNYSLVEYA 308

Query: 216 QRLKEFSEKYSV-------QIYLEPGEAIVTNTTTLNTTVLDISENIKNL--VIVDSSVE 266
             +    +            +  E G A+  +   L + + D+    K      +     
Sbjct: 309 THIMLALKHLCQEAEISEPDLISESGRALTAHHAVLISNITDVEIINKAPVLPEISEDDS 368

Query: 267 AHVPDYLLYQESATIYPNTGPYTAMVCGRS 296
             + D  +Y     I  ++          S
Sbjct: 369 HVIRD--IYDTYQAITDSSPTEIYNYAAHS 396


>gi|296242242|ref|YP_003649729.1| Orn/DAP/Arg decarboxylase 2 [Thermosphaera aggregans DSM 11486]
 gi|296094826|gb|ADG90777.1| Orn/DAP/Arg decarboxylase 2 [Thermosphaera aggregans DSM 11486]
          Length = 588

 Score = 56.3 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 35/284 (12%), Positives = 72/284 (25%), Gaps = 30/284 (10%)

Query: 16  NNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLGHEKF 70
               T   +    G  + +  +K      + D + +Y      G  + S+ E+ L H+  
Sbjct: 75  ETYKTLSQVHGYTGKFQPVFPMKVNPIPIVIDAIWKYGEEFNWGFNTGSIGEIKLLHKYL 134

Query: 71  --GGETHAYNVAYKDC-----EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
             G     Y+    D                 +   +   L      A            
Sbjct: 135 NKGSRLLIYDGVVSDNVLKLLMDFEKAGWNVIVDVESEHDLQVLSKYANIHVGLRVKPFY 194

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN--VNGLMFHNNCENKSFLCFSAMLKN 181
                         +    +    K   E +  N     +  H   +       +A+ + 
Sbjct: 195 KPGGKWSHSAGLEGKFGLTINTLLKLIKEYKWLNERAILIHVHGGSQIYELKHIAAIFEE 254

Query: 182 IEKEFGH----FITQIEWISLGGGIHFTD----------KDYPVKDFCQRLKEFSEKYSV 227
            +             I  I  GGG+ +             +Y + D+   L +  +    
Sbjct: 255 AKTLLNDLRNIGFENISIIDTGGGMAYPYHDSRKGTPESPNYTIVDYINLLIKKFKDAQP 314

Query: 228 QI--YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV 269
                 E G  IV +   +   V+D+          ++   A +
Sbjct: 315 HPTLVFEGGRYIVASHRIVVAKVVDVRPYSTEYKPFENGNGARM 358


>gi|326336144|ref|ZP_08202316.1| arginine decarboxylase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325691653|gb|EGD33620.1| arginine decarboxylase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 463

 Score = 56.3 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 49/399 (12%), Positives = 104/399 (26%), Gaps = 59/399 (14%)

Query: 13  KLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           K+  N+  A    + A                K      +     +      +SS +++ 
Sbjct: 52  KISENIQRAKRWFEKAIKKHKYKGDYNYCYCTKSSHFKHVMVEALKNDIHMETSSAFDID 111

Query: 65  ----LGHEKF-GGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQK 113
               L  E F   E +     +K                   I      +     D+  K
Sbjct: 112 IINNLIKEGFLNKENYILCNGFKRDAYIDGIADLINRGYDRCIPIIDNYEEINLFDQKIK 171

Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKC--KDKIESEIKNVNGLMFHNNCENK- 170
               IG+RI                   +       K+  +++  ++  L F  N   K 
Sbjct: 172 GKYNIGIRIASEEDPRSEFYTSRLGIGYKNIVPFYNKELKDNKKVSLKMLHFFINTGIKD 231

Query: 171 --SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIH----------FTDKDYPVKDFCQRL 218
              +         +  +      +++ +++GGG            +      +    +  
Sbjct: 232 NAYYWNELLKCLKVYIQLKKVAPELDSLNIGGGFPIKTSLAFEYDYAYMVDEIIRQIKIA 291

Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLLYQ 276
            +  +     I+ E G   V         ++   +        +++SS    +PD     
Sbjct: 292 CDQEKVPVPNIFTEFGSFTVGEAGGAIYEIMYQKQQNDREKWNMINSSFITTLPDTWAIN 351

Query: 277 ES----ATIYPNTGPYTAMVCGRSCLAGDI-----------FGEFHFEKPVKIGDRISFE 321
           +          N       + G +C   D              +++  KP+ IG    F 
Sbjct: 352 KRFVLLPINRWNDEYERVFLGGLTCDGDDYYNSEQNMNAIYLPKYNRNKPLYIG----FF 407

Query: 322 DVAGY----NINRKNWFNGINMPTIAVKNVDGTIKAIRE 356
           +   Y              I  P I + + +   + I  
Sbjct: 408 NTGAYQDSIGGVGGLQHCLIPQPKIVLIDKNKNGEIISR 446


>gi|223040993|ref|ZP_03611253.1| arginine decarboxylase [Campylobacter rectus RM3267]
 gi|222877749|gb|EEF12870.1| arginine decarboxylase [Campylobacter rectus RM3267]
          Length = 611

 Score = 56.3 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 48/289 (16%), Positives = 85/289 (29%), Gaps = 45/289 (15%)

Query: 12  QKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTL----NQYMDGTTSSSLYEV 63
           +++     +    +   G K     +  LK     G    L     +Y  G  + S  E+
Sbjct: 57  KQISQIYKSFESAKNEFGYKGSFNAVYPLKVNQYPGFVKNLVRHGQKYGYGLEAGSKAEL 116

Query: 64  MLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNKFKDKA---QKL 114
           +L               +KD E+       A + +  T+    +++L      A      
Sbjct: 117 LLVMAYNNEGAPITVNGFKDKEMINIGFIAAEMGHNITLTIEGLNELEAIIAIAKERFAP 176

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNN 166
              IGLRI    S S    A      S+ G    + IE+             N + FH  
Sbjct: 177 KPNIGLRIRLHSSGSGV-WAKSGGINSKFGLTATELIEAVNLLKEANLLDRFNMIHFHIG 235

Query: 167 CENKSFLCFS---AMLKNIEKEFGHFI-TQIEWISLGGGIHFTDKDY------------- 209
            +               NI  E        ++ I+LGGG+      +             
Sbjct: 236 SQITEIHPLKKALIEAGNIYAELRKMGAKNLKAINLGGGLAIEYSQFKENSSRNYTLSEY 295

Query: 210 --PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
              V    + +     +    I++E G  +  +   L   VL++     
Sbjct: 296 ANDVVYLLKTMATQRNEVEPDIFIESGRFVSASHAVLVAPVLELFSQDY 344


>gi|224080476|ref|XP_002306141.1| predicted protein [Populus trichocarpa]
 gi|222849105|gb|EEE86652.1| predicted protein [Populus trichocarpa]
          Length = 730

 Score = 56.3 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/331 (10%), Positives = 91/331 (27%), Gaps = 42/331 (12%)

Query: 12  QKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSS 59
             L N L++               A  + +  +KC     + + + ++      G  + S
Sbjct: 128 DVLKNRLESLQSAFDFAIQSQVYEAHYQGVYPVKCNQDRFVVEDIVRFGSPFRFGLEAGS 187

Query: 60  LYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKFKDK 110
             E++L          E       +KD E  ++            I+     +++   + 
Sbjct: 188 KPELLLAMSCLCKGNPEALLICNGFKDGEYISLALIARKLALNTVIVLEQEEEIDLVIEL 247

Query: 111 AQKLHKKIGLRINPSVSY-SKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGL 161
           ++K+  +  + +   +           +    + G      +                 L
Sbjct: 248 SKKMSVRPVVGVRAKLRTKHSGHFGSTSGEKGKFGLTTTQILRVVKKLEQAGMLDCFQLL 307

Query: 162 MFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRL 218
            FH   +  S        +    I  E      +++ I +GGG+          +    +
Sbjct: 308 HFHIGSQIPSTSLLADGVSEAAQIYCELVRLGARMQVIDIGGGLGIDYDGSKSGNSDLSV 367

Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQES 278
               E+Y++ +        V +   +   V+        +          + + +    +
Sbjct: 368 AYGLEEYALAVVQAVK--FVCDRKNVKHPVICSESGRAIVSHHSI----LIFEAISSSST 421

Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFE 309
           +     +      + G   L  D   ++   
Sbjct: 422 SAASMTSYEMQYYLGG---LTEDARADYRNL 449


>gi|52840262|ref|YP_094061.1| arginine decarboxylase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|52627373|gb|AAU26114.1| biosynthetic arginine decarboxylase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 630

 Score = 56.3 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 42/330 (12%), Positives = 94/330 (28%), Gaps = 47/330 (14%)

Query: 12  QKLLNNLDTALYIRKNA----GVKLLLALKCFAAWGMFDTLNQYMD---GTTSSSLYEVM 64
            ++          R++       +L+  +K      +   L +  D   G  + S  E+M
Sbjct: 69  DRVHRIYQAFTQAREDTCYAGNYQLVYPIKVNQEQSVVRELLKSPDNQIGLEAGSKPELM 128

Query: 65  LGHEKFGGETHAY-NVAYKDCEIDAV------LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
                 G          YKD            + +   I+    S+L+    ++ +L  K
Sbjct: 129 AVIGMLGDHQSTIVCNGYKDTSYIRTALIAQQMGHKVFIVIEKKSELDIILKESARLQIK 188

Query: 118 IGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKI--------ESEIKNVNGLMFHNNCE 168
             L +    VS S     +     S+ G   K  +           +  +  +  H   +
Sbjct: 189 PTLGVRIRLVSKSAGKWENTGGVKSKFGLNAKQVLELILQLKANDMLDCLQLMHCHLGSQ 248

Query: 169 NKSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDK----------DYPVKDFC 215
             +       ++ + +           I  I +GGG+    +          +Y + ++ 
Sbjct: 249 IANIHDIRHCMQEVARYYIELRQLNAPIGTIDVGGGLSVDYEGTRSNKGCSMNYSLVEYA 308

Query: 216 QRLKEFSEKYSV-------QIYLEPGEAIVTNTTTLNTTVLDISENIKNL--VIVDSSVE 266
             +    +            +  E G A+  +   L + + D+    K      +     
Sbjct: 309 THIMLALKHLCQEAEISEPDLISESGRALTAHHAVLISNITDVEIINKAPVLPEISEDDS 368

Query: 267 AHVPDYLLYQESATIYPNTGPYTAMVCGRS 296
             + D  +Y     I  ++          S
Sbjct: 369 HVIRD--IYDTYQAITDSSPTEIYNYAAHS 396


>gi|15858871|gb|AAL08053.1| ornithine decarboxylase-like protein variant 6 [Homo sapiens]
 gi|56202450|emb|CAI19353.1| arginine decarboxylase [Homo sapiens]
 gi|119627881|gb|EAX07476.1| arginine decarboxylase, isoform CRA_h [Homo sapiens]
          Length = 204

 Score = 56.3 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 6  YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSS 58
          +++ D   ++       +++    V+   A+KC ++ G+   L Q   G + +
Sbjct: 41 FFVADLGAIVR--KHFCFLKCLPRVRPFYAVKCNSSPGVLKVLAQLGLGFSCA 91


>gi|148358145|ref|YP_001249352.1| biosynthetic arginine decarboxylase [Legionella pneumophila str.
           Corby]
 gi|296105503|ref|YP_003617203.1| arginine decarboxylase [Legionella pneumophila 2300/99 Alcoy]
 gi|148279918|gb|ABQ54006.1| biosynthetic arginine decarboxylase [Legionella pneumophila str.
           Corby]
 gi|295647404|gb|ADG23251.1| arginine decarboxylase [Legionella pneumophila 2300/99 Alcoy]
          Length = 630

 Score = 56.3 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 42/330 (12%), Positives = 94/330 (28%), Gaps = 47/330 (14%)

Query: 12  QKLLNNLDTALYIRKNA----GVKLLLALKCFAAWGMFDTLNQYMD---GTTSSSLYEVM 64
            ++          R++       +L+  +K      +   L +  D   G  + S  E+M
Sbjct: 69  DRVHRIYQAFTQAREDTYYAGNYQLVYPIKVNQEQSVVRELLKSPDNQIGLEAGSKPELM 128

Query: 65  LGHEKFGGETHAY-NVAYKDCEIDAV------LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
                 G          YKD            + +   I+    S+L+    ++ +L  K
Sbjct: 129 AVIGMLGDHQSTIVCNGYKDTSYIRTALIAQQMGHKVFIVIEKKSELDIILKESARLQIK 188

Query: 118 IGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKI--------ESEIKNVNGLMFHNNCE 168
             L +    VS S     +     S+ G   K  +           +  +  +  H   +
Sbjct: 189 PTLGVRIRLVSKSAGKWENTGGVKSKFGLNAKQVLELILQLKANDMLDCLQLMHCHLGSQ 248

Query: 169 NKSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDK----------DYPVKDFC 215
             +       ++ + +           I  I +GGG+    +          +Y + ++ 
Sbjct: 249 IANIHDIRHCMQEVARYYIELRQLNAPIGTIDVGGGLSVDYEGTRSNKGCSMNYSLVEYA 308

Query: 216 QRLKEFSEKYSV-------QIYLEPGEAIVTNTTTLNTTVLDISENIKNL--VIVDSSVE 266
             +    +            +  E G A+  +   L + + D+    K      +     
Sbjct: 309 THIMLALKHLCQEAEIPEPDLISESGRALTAHHAVLISNITDVEIINKAPVLPEISEDDS 368

Query: 267 AHVPDYLLYQESATIYPNTGPYTAMVCGRS 296
             + D  +Y     I  ++          S
Sbjct: 369 HVIRD--IYDTYQAITDSSPTEIYNYAAHS 396


>gi|315226159|ref|ZP_07867947.1| diaminopimelate decarboxylase [Parascardovia denticolens DSM 10105]
 gi|315120291|gb|EFT83423.1| diaminopimelate decarboxylase [Parascardovia denticolens DSM 10105]
          Length = 129

 Score = 56.3 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 31/90 (34%), Gaps = 1/90 (1%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           +TPY + D   + + +    +     G  KL  ALK      +   L +   G   +S  
Sbjct: 27  ETPYIIFDFTGIRHAVQEYQHSICLLGNAKLNFALKACYEPDILRLLREEKLGVDVASSN 86

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLS 91
           E  L  +    E  A   ++   +   +  
Sbjct: 87  EFKLAQKIGFDEISATGPSFTHPDQVDIWH 116


>gi|255536389|ref|YP_003096760.1| putative arginine decarboxylase [Flavobacteriaceae bacterium
           3519-10]
 gi|255342585|gb|ACU08698.1| putative arginine decarboxylase [Flavobacteriaceae bacterium
           3519-10]
          Length = 463

 Score = 55.9 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 58/420 (13%), Positives = 119/420 (28%), Gaps = 69/420 (16%)

Query: 3   KTPY-YLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD 53
            TP  +     K+  N+  A    K A        G +     K      + +   +   
Sbjct: 42  GTPLKFNY-LPKISMNIQRAKAWFKEAIEKNDYKKGYRYCYCTKSSQFAFVLEEALKNDI 100

Query: 54  GTTSSSLYEVMLGHE-----KFGGETHAYNVAYKDCEIDAVL-------SNCDTIIFNTV 101
              +SS Y++ +        K+  +       +K  +  A +             + +  
Sbjct: 101 SIETSSAYDMDIVKALYDKGKYDKDVEVICNGFKTDDYLAKISDLINSGFQNIVPVLDNY 160

Query: 102 SQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN--VN 159
            +L+K  + +      IG+RI                   +       +  +E  N  + 
Sbjct: 161 RELDKLTE-SIDTTFNIGIRIASEEEPKFEFYTSRLGIGYKDIIPYYSQKIAEHPNARLK 219

Query: 160 GLMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFT---DKDYPVKD 213
            L F  N   K    +   L    + +        +++ +++GGG       + DY  + 
Sbjct: 220 MLHFFINTGIKDTAYYWNELYKCLRVYARLKKIAPEVDSLNIGGGFPIKTSLNFDYDYQY 279

Query: 214 FCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSS 264
               +    +K+          IY E G   V  +      ++      + +   ++DSS
Sbjct: 280 MVNEIVSQIKKFCEEEGVEEPNIYTEFGSFTVGESGGNLYKIISQKRQNDREKWNMIDSS 339

Query: 265 VEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIF-----GEFHFEK----- 310
               +PD                +       + G +C + D +         +       
Sbjct: 340 FMTTLPDTWAISRHFIMLPLNRWDDTYERVFLGGLTCDSDDYYNSEQHTNAIYLPVFSDT 399

Query: 311 -PVKIGDRISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDGTIKAIREFSYNDYYN 364
            P+ IG    F     Y       + G     +  P   + N D        F+Y  +  
Sbjct: 400 KPLYIG----FFHTGAYQETIG-GYGGVHHCLMPQPKHILINKDEEGN----FTYEVFRE 450


>gi|222823751|ref|YP_002575325.1| arginine decarboxylase [Campylobacter lari RM2100]
 gi|222538973|gb|ACM64074.1| arginine decarboxylase [Campylobacter lari RM2100]
          Length = 609

 Score = 55.9 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 49/289 (16%), Positives = 85/289 (29%), Gaps = 45/289 (15%)

Query: 12  QKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTL----NQYMDGTTSSSLYEV 63
           +++    D     +K    K     +  LK     G    L     +Y  G  + S  E+
Sbjct: 57  KQIEQIYDKFAKAKKEFNYKGSFNAVYPLKVNQYPGFVKNLVNLGREYNYGLEAGSKAEL 116

Query: 64  MLGHEKFGGETHAYNVAYKDC------EIDAVLSNCDTIIFNTVSQLNKFKDKA---QKL 114
           +L               +KD        I   + +  T+    +++L    + A    K 
Sbjct: 117 LLAMAYNNEGAPITVNGFKDKELINMGFIACEMGHNITLTMEGLNELEAMIEIAKNRFKP 176

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNN 166
              IGLR+    S    I A      S+ G    + IE+               + FH  
Sbjct: 177 KPNIGLRVRL-HSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKANKLLDQFTMIHFHLG 235

Query: 167 CENKSFLCFSAMLKN---IEKEFGHFI-TQIEWISLGGGIHFTDKDY------------- 209
            +          L     I  E        ++ I+LGGG+      +             
Sbjct: 236 SQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKNETSRNYTLSEY 295

Query: 210 --PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
              V    + + E  +     I++E G  +  N   L   VL++     
Sbjct: 296 ANDVVFILKSIAEQKKDLEPDIFIESGRFVAANHAVLVAPVLELFSQEY 344


>gi|183178878|gb|ACC43927.1| arginine decarboxylase [Malus hupehensis]
          Length = 728

 Score = 55.9 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/236 (12%), Positives = 65/236 (27%), Gaps = 33/236 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +     L + L++               +  + +  +KC     + + + ++     
Sbjct: 112 PLIVRLPDVLKDRLESLQGAFDLAIRSHDYGSHYQGVYPVKCNQDRFVVEDIVKFGSPFR 171

Query: 54  -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109
            G  + S  E++L          +       +KD E  ++      +  NTV  L + ++
Sbjct: 172 FGLEAGSKPELLLAMSCLCKGNPDALLICNGFKDLEYISLALFARKLALNTVIVLEQEEE 231

Query: 110 KAQKLHKKIGLRINPSVSY-------SKFILADPNRPFSRLGEKCKDKIESEI------- 155
               +     L + P +                 +    + G      +           
Sbjct: 232 LDLVVDFSQKLGVRPVIGVRAKLKTKHSGHYGSTSGEKGKFGLTTTQILRVVKKLDKLGM 291

Query: 156 -KNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207
                 L FH   +  S        +    I  E       ++ I +GGG+     
Sbjct: 292 LDCFQLLHFHIGSQIPSTALLADGVSEASQIYCELVRLGAHMKVIDIGGGLGIDYD 347


>gi|302519673|ref|ZP_07272015.1| lysine/ornithine decarboxylase [Streptomyces sp. SPB78]
 gi|302428568|gb|EFL00384.1| lysine/ornithine decarboxylase [Streptomyces sp. SPB78]
          Length = 220

 Score = 55.9 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 40/137 (29%), Gaps = 4/137 (2%)

Query: 210 PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE--- 266
             +   +            +    G +++     L   V  +       + V  +     
Sbjct: 44  DTRRCSRFSVPGLFDGRYALVTGFGRSLLAGHGFLLARVEYVRAMGGRRLAVTHAGTRMA 103

Query: 267 AHVPDYLLYQESATIYPNTGPYTAM-VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
            H     L    A   P  GP  A  + G +   G++         ++ GD ++  D   
Sbjct: 104 GHACGRRLAAYDAQGRPKEGPALAQDLAGPAQFDGELLASGAELPELEQGDWLAVLDTGA 163

Query: 326 YNINRKNWFNGINMPTI 342
           Y   R   ++ +  P I
Sbjct: 164 YGFARHQAYDSLTRPGI 180


>gi|254492362|ref|ZP_05105534.1| arginine decarboxylase [Methylophaga thiooxidans DMS010]
 gi|224462254|gb|EEF78531.1| arginine decarboxylase [Methylophaga thiooxydans DMS010]
          Length = 648

 Score = 55.9 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/251 (11%), Positives = 70/251 (27%), Gaps = 32/251 (12%)

Query: 11  KQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD----GTTSS 58
           +  L   +         A          + +  +K      + + +  Y      G  + 
Sbjct: 82  ENLLDQRITQLNEAFAKAINEAGYNNHYRGVFPIKVNQQCHVIEEIADYGSRYHHGLEAG 141

Query: 59  SLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
           S  E+++   +    E+      YKD E   +      +  N    L    +    L + 
Sbjct: 142 SKAELIIALTQLKDPESLIICNGYKDEEFIELGLYARQMGINCFFVLETAMELDIILERS 201

Query: 118 IGLRINPSV-------SYSKFILADPNRPFSRLGEKCKDKI--------ESEIKNVNGLM 162
             L I+P +       S  +    + +   S  G      +           +  +  L 
Sbjct: 202 RALGIDPLIGVRIRLASMVEGHWNEDSGDRSIFGLSTNALLGVIEKLKQADMLHCLQLLH 261

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLK 219
            H   +  +     + +    + +         + +I +GGG+    +     +    + 
Sbjct: 262 SHLGSQIPNIRNIRSGVMEACRFYAGLIEEGAPMGYIDIGGGLAVDYEG-ARSNSTHSMN 320

Query: 220 EFSEKYSVQIY 230
              ++Y   I 
Sbjct: 321 YGLDEYCYSIV 331


>gi|23012521|ref|ZP_00052585.1| COG0019: Diaminopimelate decarboxylase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 121

 Score = 55.9 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 21/54 (38%), Gaps = 4/54 (7%)

Query: 289 TAMVCGRSCLAGDIFGE---FHFEKPVKIGDRISFEDVAGYNINRKNW-FNGIN 338
             +V G +C + D+  E   +     + IGD++  E    Y        FNG  
Sbjct: 61  PCVVAGPTCDSVDVLYEKNHYPLPVSLSIGDKVWIEGTGAYTTTYAAVAFNGFP 114


>gi|57506109|ref|ZP_00372031.1| arginine decarboxylase [Campylobacter upsaliensis RM3195]
 gi|57015593|gb|EAL52385.1| arginine decarboxylase [Campylobacter upsaliensis RM3195]
          Length = 610

 Score = 55.9 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 51/289 (17%), Positives = 88/289 (30%), Gaps = 45/289 (15%)

Query: 12  QKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEV 63
           +++ N   +    RK    K     +  LK     G    L +       G  + S  E+
Sbjct: 57  KQIENIYGSFTKARKEFDYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAEL 116

Query: 64  MLGHEKFGGETHAYNVAYKDC------EIDAVLSNCDTIIFNTVSQLNKFKDKA---QKL 114
           +L        +      +KD        I A + +  T+    +++L    D A    K 
Sbjct: 117 LLAMAYNNENSPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKP 176

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNVNGLMFHNN 166
              IGLR+    S    I A      S+ G    + IE+         I+    + FH  
Sbjct: 177 KPNIGLRVRL-HSAGVGIWAKSGGIHSKFGLTSTELIEAVNLLKENKLIEQFTMIHFHLG 235

Query: 167 CENKSFLCFSAMLKN---IEKEFGHFI-TQIEWISLGGGIHFTDKDY------------- 209
            +          L     I  E        ++ I+LGGG+      +             
Sbjct: 236 SQINEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKDEKSRNYTLREY 295

Query: 210 --PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
              V    + + E        I++E G  +  +   L   VL++     
Sbjct: 296 ANDVVFILKNIAEQKSDIEPDIFIESGRFVAASHAILIAPVLELFSQEY 344



 Score = 38.6 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 43/133 (32%), Gaps = 18/133 (13%)

Query: 249 LDISENIKNLVIVDSSVEAHVPDYL----LYQESATIYPNTGP-YTAMVCGRSCLAGDIF 303
           + I   ++   +V+ S+   +PD+      +        +  P  +A +   +C + D  
Sbjct: 429 IAIQNEVQERYLVNFSLFQSMPDFWGLEQNFPIMPLDRLDEKPTRSASIWDITCDS-DGE 487

Query: 304 GEFHFEKPVKIGD--------RISFEDVAGYNINRKNWFNGINMPTI--AVKNVDGTIK- 352
             +  + P+ + D         + F  +  Y        N    PT      + +G +  
Sbjct: 488 ISYSKDNPLLLHDVDVEKENYFLGFFLMGAYQEVLGMKHNLFTHPTEASVYIDENGYVLK 547

Query: 353 -AIREFSYNDYYN 364
             I   S  D   
Sbjct: 548 DIIEAQSILDILE 560


>gi|315638101|ref|ZP_07893286.1| arginine 2-monooxygenase [Campylobacter upsaliensis JV21]
 gi|315481949|gb|EFU72568.1| arginine 2-monooxygenase [Campylobacter upsaliensis JV21]
          Length = 610

 Score = 55.9 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 51/289 (17%), Positives = 88/289 (30%), Gaps = 45/289 (15%)

Query: 12  QKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEV 63
           +++ N   +    RK    K     +  LK     G    L +       G  + S  E+
Sbjct: 57  KQIENIYGSFTKARKEFDYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAEL 116

Query: 64  MLGHEKFGGETHAYNVAYKDC------EIDAVLSNCDTIIFNTVSQLNKFKDKA---QKL 114
           +L        +      +KD        I A + +  T+    +++L    D A    K 
Sbjct: 117 LLAMAYNNENSPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKP 176

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNVNGLMFHNN 166
              IGLR+    S    I A      S+ G    + IE+         I+    + FH  
Sbjct: 177 KPNIGLRVRL-HSAGVGIWAKSGGIHSKFGLTSTELIEAVNLLKENKLIEQFTMIHFHLG 235

Query: 167 CENKSFLCFSAMLKN---IEKEFGHFI-TQIEWISLGGGIHFTDKDY------------- 209
            +          L     I  E        ++ I+LGGG+      +             
Sbjct: 236 SQINEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQFKDEKSRNYTLREY 295

Query: 210 --PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
              V    + + E        I++E G  +  +   L   VL++     
Sbjct: 296 ANDVVFILKNIAEQKSDIEPDIFIESGRFVAASHAILIAPVLELFSQEY 344



 Score = 38.6 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 43/133 (32%), Gaps = 18/133 (13%)

Query: 249 LDISENIKNLVIVDSSVEAHVPDYL----LYQESATIYPNTGP-YTAMVCGRSCLAGDIF 303
           + I   ++   +V+ S+   +PD+      +        +  P  +A +   +C + D  
Sbjct: 429 IAIQNEVQERYLVNFSLFQSMPDFWGLEQNFPIMPLDRLDEKPTRSASIWDITCDS-DGE 487

Query: 304 GEFHFEKPVKIGD--------RISFEDVAGYNINRKNWFNGINMPTI--AVKNVDGTIK- 352
             +  + P+ + D         + F  +  Y        N    PT      + +G +  
Sbjct: 488 ISYSKDNPLLLHDVDVEKENYFLGFFLMGAYQEVLGMKHNLFTHPTEASVYIDENGYVLK 547

Query: 353 -AIREFSYNDYYN 364
             I   S  D   
Sbjct: 548 DIIEAQSILDILE 560


>gi|282892086|ref|ZP_06300561.1| hypothetical protein pah_c207o009 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281497981|gb|EFB40325.1| hypothetical protein pah_c207o009 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 623

 Score = 55.9 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/307 (13%), Positives = 92/307 (29%), Gaps = 48/307 (15%)

Query: 14  LLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYM----DGTTSSSLY 61
           + + +       +            +++  +K      + +T+         G    S  
Sbjct: 62  VRDRIQRLNAAFQAAIREFNYRNTHQMVFPIKVNPQRHVVETVQHAGQEFKMGLEVGSKP 121

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKL 114
           E++         +T      YKD E  ++            II     +L    D A+KL
Sbjct: 122 ELIAVFAIDTHPDTILLCNGYKDIEYISLALIASKLGRRTLIIIEQAYELQLVLDAAKKL 181

Query: 115 HKKIGLRINPSVS-YSKFILADPNRPFSRLGEKCKDKI--------ESEIKNVNGLMFHN 165
             +  +     +S              S+ G    + I          +   +  L FH 
Sbjct: 182 GVEAEIGFRMKLSNTGSGRWKSSGGEHSKFGLFSHEIIACIETLQHHEKTHWLKLLHFHL 241

Query: 166 NCENKSFLCFSAMLK---NIEKEFGHFITQIEWISLGGGIH----------FTDKDYPVK 212
             +  +       LK    +  E    +  + +  +GGG+            +  +Y ++
Sbjct: 242 GSQITTIESVKKTLKEASRMYTELATMLPFLSFFDVGGGLAVDYDGSKSDSDSSMNYTME 301

Query: 213 DFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSV 265
           ++ + +     +           I  E G AIV + + L T V+D++         ++  
Sbjct: 302 EYARDVVFAIGEACLSADVADPIIITEAGRAIVAHHSVLVTEVIDVTTTPNIPEKWNAHS 361

Query: 266 EAHVPDY 272
           +  +   
Sbjct: 362 KHEILTT 368


>gi|147782234|emb|CAN65288.1| hypothetical protein VITISV_008959 [Vitis vinifera]
          Length = 613

 Score = 55.9 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/236 (12%), Positives = 66/236 (27%), Gaps = 33/236 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +     L N L++               +  + +  +KC     + + + ++     
Sbjct: 21  PLIVRLPDVLQNRLESLQSAFDFAIQSQGYESHYQGVFPVKCNQDRFIVEDVVKFGSAFR 80

Query: 54  -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
            G  + S  E++L          E       +KD +  A+            I+     +
Sbjct: 81  FGLEAGSKPELLLAMSCLCKGNPEALLVCNGFKDADYIALALVARKLALNTVIVLEQEEE 140

Query: 104 LNKFKDKAQKLHKKIGLRINPSVSYSK-FILADPNRPFSRLGEKCKDKIESEI------- 155
           L+   + +QKL     + +   +           +    + G      +           
Sbjct: 141 LDLVINLSQKLSVHPVIGVRAKLRTKHAGHFGSTSGEKGKFGLTTXQILRVVRKLEQAGM 200

Query: 156 -KNVNGLMFHNNCENKSFL---CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207
             ++  L FH   +  S        +    I  E       +  I +GGG+     
Sbjct: 201 LDSLQLLHFHIGSQIPSTDLLADGVSEAAQIYCELVRLGAHMRVIDIGGGLGIDYD 256


>gi|298715473|emb|CBJ34056.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 139

 Score = 55.9 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 17/47 (36%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTL 48
           + TP Y+ D   L  N +  L      G+ +  A+K      +    
Sbjct: 91  VGTPAYVYDAASLKANAEACLAFPNAYGLTVRYAMKSLPNKAVLQLF 137


>gi|292493374|ref|YP_003528813.1| arginine decarboxylase [Nitrosococcus halophilus Nc4]
 gi|291581969|gb|ADE16426.1| arginine decarboxylase [Nitrosococcus halophilus Nc4]
          Length = 629

 Score = 55.9 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/297 (11%), Positives = 68/297 (22%), Gaps = 46/297 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLL--------ALKCFAAWGMFDTL---NQYMD 53
           P  +     L +   +       A               +K      +   +   +    
Sbjct: 62  PVLVRFSGILHHRAKSLQTAFTEAMAATHYQGSFNAVYPIKVNQQRQVVKEILAADPEHM 121

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCD------TIIFNTVSQLNKF 107
           G  + S  E++                YKD E   +            ++    S+L   
Sbjct: 122 GLEAGSKPELLAVMALSRPGAPVICNGYKDREYIRLALMGRQLGLRIYLVVEKPSELEHI 181

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ESEIKNV 158
             +A+ L  K  L +   ++               + G      +           I  +
Sbjct: 182 IREARALKVKPLLGVRVRLASIGKGKWQNTGGEKGKFGLSSAQVLTMLQRLRQMEMIDCL 241

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK-------- 207
             L FH   +                           +  + +GGG+             
Sbjct: 242 TLLHFHMGSQLPNIADIQRGIREAGRYYATLRELGVPLRSVDVGGGLGVDYDGTHTRGFC 301

Query: 208 ------DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENI 255
                           L E  + +     +I  E G A+  +   L + ++D     
Sbjct: 302 STNYTLSEYAHKIVHGLWEICDAHQLPHPEIITEAGRAMTAHHAVLISNIIDTQPAP 358


>gi|169245570|gb|ACA50831.1| LysA [Agrobacterium tumefaciens]
 gi|169245572|gb|ACA50832.1| LysA [Agrobacterium tumefaciens]
          Length = 157

 Score = 55.9 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 39/153 (25%), Gaps = 21/153 (13%)

Query: 190 ITQIEWISLGGGIHFTDKDY-----------PVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
              +E I LGGG+                   + D    LK         + +EPG  + 
Sbjct: 3   GKPLETIDLGGGLGIPYFAGETPLDLAKVAAAIPDLKALLKAHPLIADAHVIVEPGRFLA 62

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY----------LLYQESATIYPNTGPY 288
                    V  +  +     +V +    H                   +  +       
Sbjct: 63  GPGGLYVAEVNSVKISRGTTFLVTNGGMHHHLAASGNLGQIVKRNYPIVAPAMMQAAYEE 122

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321
           TA + G  C   D          +K GD ++  
Sbjct: 123 TATIVGPLCTPLDTLARNAALPKLKAGDLLAIL 155


>gi|320352212|ref|YP_004193551.1| arginine decarboxylase [Desulfobulbus propionicus DSM 2032]
 gi|320120714|gb|ADW16260.1| arginine decarboxylase [Desulfobulbus propionicus DSM 2032]
          Length = 638

 Score = 55.9 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 89/305 (29%), Gaps = 46/305 (15%)

Query: 19  DTALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEKF 70
           +T     +  G K        +K      + + + Q+      G  + S  E++      
Sbjct: 84  ETFRSAMEELGYKGTFMGAYPIKVNQQQQVVEKIAQFGSRYHHGLEAGSKAELIAAMGMM 143

Query: 71  -GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------FKDKAQKLHKKIGLRIN 123
              +       YKD E   +      I F  +  +          ++++ L+ K  L I 
Sbjct: 144 RDKKAALICNGYKDEEFIDLGLYATKIGFTCILVVEMPDELPLIIERSKALNAKPILGIR 203

Query: 124 PSVSYS-KFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKSFLC 174
             +S       ++     S  G      I++            +  + +H   +  +   
Sbjct: 204 IKLSAQAGGHWSESGGERSIFGLNTSQIIQAVDLLASAGMLDCLKLVHYHLGSQISNIRE 263

Query: 175 FSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDK--------------DYPVKDFCQR 217
               +    + +        Q++++ LGGG+                        D  + 
Sbjct: 264 IRTAVNEACRVYAGLVKEGAQVQYLDLGGGLAVDYDGSQSNFLSSRNYTLKEYCTDIIEA 323

Query: 218 LKEFSEK---YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLL 274
           +    E+       I  E G A+V   + L   +LD+++     +          P  L 
Sbjct: 324 VMTSLEEDQIPHPVIVTESGRALVAYYSILLFNILDVTQFHAEPLPAKLPEGC--PPQLE 381

Query: 275 YQESA 279
           Y   A
Sbjct: 382 YMHQA 386


>gi|313207184|ref|YP_004046361.1| orn/dap/arg decarboxylase 2 [Riemerella anatipestifer DSM 15868]
 gi|312446500|gb|ADQ82855.1| Orn/DAP/Arg decarboxylase 2 [Riemerella anatipestifer DSM 15868]
 gi|315022415|gb|EFT35442.1| putative arginine decarboxylase [Riemerella anatipestifer RA-YM]
 gi|325335377|gb|ADZ11651.1| arginine decarboxylase [Riemerella anatipestifer RA-GD]
          Length = 463

 Score = 55.9 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 58/424 (13%), Positives = 116/424 (27%), Gaps = 68/424 (16%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVK--------LLLALKCFAAWGMFDTLNQYMDG 54
            TP  +    K+  N+  A      A  K             K      + +   +    
Sbjct: 42  GTPLKISYLPKISQNIQRAKKWFSEAIAKNEYRNTYRYCYCTKSSHFSFVLEEALKNDIS 101

Query: 55  TTSSSLYEVMLGHEKFGG-------ETHAYNVAYKDCEIDAVLSNCDTI-----IFNTVS 102
             +SS +++ +  + +         E         D          +       I +   
Sbjct: 102 METSSAFDMDIVRKLYDKGKVTKDIEVICNGFKTDDYLEKISDLINEGFENITPILDNYR 161

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN--VNG 160
           +L+K  + +      IG+RI                   +       +  +E  N  +  
Sbjct: 162 ELDKLTE-SIDTTFNIGIRIASEEEPKFEFYTSRLGIGYKDIIPYYSQKIAEHPNARLKM 220

Query: 161 LMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFT---DKDYPVKDF 214
           L F  N   K    +   L    + +        +++ +++GGG       + DY  +  
Sbjct: 221 LHFFINTGIKDTAYYWNELFKCLRVYARLKKIAPEVDSLNIGGGFPIKTSLNFDYDYEYM 280

Query: 215 CQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSV 265
              +    +K+          IY E G   V  +      ++      + +   ++DSS 
Sbjct: 281 VNEIVSQIKKFCEEEGVEEPNIYTEFGSFTVGESGANLYQIISQKRQNDREKWDMIDSSF 340

Query: 266 EAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIF-----GEFHFEK------ 310
              +PD                        + G +C + D +         +        
Sbjct: 341 MTTLPDTWAISRHFIMLPLNRWEDSYERVFLGGLTCDSDDYYNSEQHTNAIYLPVFSDTK 400

Query: 311 PVKIGDRISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDGT----IKAIRE-FSYN 360
           P+ IG    F +   Y  +  + + G     I  P   +   D       +  RE  S  
Sbjct: 401 PLYIG----FFNTGAYQESI-SGYGGAHHCLIPQPRHILITKDEEGNFVYELFREKQSPE 455

Query: 361 DYYN 364
           D   
Sbjct: 456 DVLK 459


>gi|307546595|ref|YP_003899074.1| arginine decarboxylase [Halomonas elongata DSM 2581]
 gi|307218619|emb|CBV43889.1| arginine decarboxylase [Halomonas elongata DSM 2581]
          Length = 636

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/266 (11%), Positives = 77/266 (28%), Gaps = 34/266 (12%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL------NQ 50
           P  +     L + ++        A        G   +  +K      + + +       +
Sbjct: 64  PVLVRFTDILHDRVEQLCAAFDGAMAEEDFEGGYTAVYPIKVNQQHRVVEEILATQERGR 123

Query: 51  YMDGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQ 103
              G  + S  E++  L     G      N       I        L +   ++   +S+
Sbjct: 124 GRVGLEAGSKPELLAVLALSGDGPSLIVCNGYKDREYIRLALMGERLGHRVYLVVEKLSE 183

Query: 104 LNKFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDK--------IESE 154
           L    ++A+ L  +  + +     S  K    +     S+ G                  
Sbjct: 184 LPLILEEAEHLGVRPRIGLRARLASVGKGKWQNTGGEKSKFGLTASQIQAMIERLSEADA 243

Query: 155 IKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPV 211
           + ++  + FH   +  +       L+   + +         ++ + +GGG+    +    
Sbjct: 244 LGSLQLVHFHLGSQIANIHDIQRGLRECARFYQNLLAMGAPVDTVDVGGGLGIDYEGTRS 303

Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAI 237
           + FC  +     +Y+  +     +  
Sbjct: 304 RSFCS-INYSMREYARNVVTAFSQVC 328


>gi|332701702|ref|ZP_08421790.1| arginine decarboxylase [Desulfovibrio africanus str. Walvis Bay]
 gi|332551851|gb|EGJ48895.1| arginine decarboxylase [Desulfovibrio africanus str. Walvis Bay]
          Length = 639

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 88/305 (28%), Gaps = 29/305 (9%)

Query: 12  QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLGH 67
           +     +    Y  K  GV     +K      + D + +Y      G  + S  E++   
Sbjct: 85  ESFRAAIKKLDYKGKFRGV---YPIKVNQQEQVVDEVTRYGQRFHHGLEAGSKAELIAAL 141

Query: 68  EKF-GGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
                 E       YKD E          +      +    S+L+    +A  L+ +  L
Sbjct: 142 AMLRDKEACLVCNGYKDQEFIDLGLFATKMGYKLFFVLEMPSELDLIMSRAAYLNIRPLL 201

Query: 121 RINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNVNGLMFHNNCENKS 171
            +   ++         +       G      +E             +  L +H   +  +
Sbjct: 202 GVRLKLATQAGGHWTESGGDRSIFGLNTSQLVEVVDSLKERGMLDCLQLLHYHLGSQIPN 261

Query: 172 FLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
                +      + +        ++ ++ LGGG+          +F        E+Y   
Sbjct: 262 IRDIRSAALEASRIYAELVKEGVKMGYLDLGGGLAVDYDG-SHTNFTNSRNYSLEEYCAD 320

Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY 288
           I     E +       + T+  I+E+ + LV   S +  ++ D   ++ +          
Sbjct: 321 IIETVMETMENAGVDHHPTI--ITESGRALVAYYSVLLFNILDVSRFEAAPVPETLPEDT 378

Query: 289 TAMVC 293
              + 
Sbjct: 379 PEHLV 383


>gi|17939910|emb|CAD19513.1| DAP decarboxylase [Rhizobium etli]
          Length = 61

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 13/38 (34%)

Query: 2  IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCF 39
          + TP+Y+     L  +         +    +  A+K  
Sbjct: 24 VGTPFYVYSTATLERHYRVFSEAFADVDSMVCYAMKAN 61


>gi|225427782|ref|XP_002269030.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 720

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/236 (12%), Positives = 66/236 (27%), Gaps = 33/236 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +     L N L++               +  + +  +KC     + + + ++     
Sbjct: 117 PLIVRLPDVLQNRLESLQSAFDFAIQSQGYESHYQGVFPVKCNQDRFIVEDVVKFGSAFR 176

Query: 54  -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
            G  + S  E++L          E       +KD +  A+            I+     +
Sbjct: 177 FGLEAGSKPELLLAMSCLCKGNPEALLVCNGFKDADYIALALVARKLALNTVIVLEQEEE 236

Query: 104 LNKFKDKAQKLHKKIGLRINPSVSYSK-FILADPNRPFSRLGEKCKDKIESEI------- 155
           L+   + +QKL     + +   +           +    + G      +           
Sbjct: 237 LDLVINLSQKLSVHPVIGVRAKLRTKHAGHFGSTSGEKGKFGLTTIQILRVVRKLEQAGM 296

Query: 156 -KNVNGLMFHNNCENKSFL---CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207
             ++  L FH   +  S        +    I  E       +  I +GGG+     
Sbjct: 297 LDSLQLLHFHIGSQIPSTDLLADGVSEAAQIYCELVRLGAHMRVIDIGGGLGIDYD 352


>gi|37523639|ref|NP_927016.1| arginine decarboxylase [Gloeobacter violaceus PCC 7421]
 gi|48474347|sp|Q7NE10|SPEA_GLOVI RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|35214644|dbj|BAC92011.1| arginine decarboxylase [Gloeobacter violaceus PCC 7421]
          Length = 644

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 82/306 (26%), Gaps = 48/306 (15%)

Query: 12  QKLLNNLDTALYIR-------KNAG-VKLLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
             L + +                 G  K +  +K      + + + ++      G  + S
Sbjct: 67  DILADRIARLNACFVEAIREYDYPGIYKGVYPVKVNQQRHVVEEVVEFGRPFQYGLEAGS 126

Query: 60  LYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK------AQ 112
             E+++                YKD E          +       + +F +       AQ
Sbjct: 127 KPELLIALATLKTPGALIICNGYKDSEYIETALLAQRLGHTPFVVIERFHELTLLIEAAQ 186

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNVNGLMF 163
           KL  +  + +   ++         +     + G    + +E          + ++  L F
Sbjct: 187 KLGIRPLIGVRAKLTARGIGRWGDSTGDRAKFGLSAGEIMEVVAQLKAADLLSSLQLLHF 246

Query: 164 HNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDK------------- 207
           H   +  +       L+       E       +++  +GGG+                  
Sbjct: 247 HIGSQISAINVIKTALREASCVYVELAQMGAPMQYCDVGGGLAIDYDGSKTNFRASKNYN 306

Query: 208 ----DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDS 263
                Y V    Q            +  E G AI ++ + L   V+ +S          +
Sbjct: 307 MQEYAYDVVAAFQDACRTKNVPVPTLVSESGRAITSHQSVLVFDVMGVSHLQFGEPEPPA 366

Query: 264 SVEAHV 269
             E  +
Sbjct: 367 RNEHSI 372


>gi|51236712|gb|AAT99013.1| ornithine decarboxylase [Glomerella lindemuthiana]
          Length = 278

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/278 (12%), Positives = 72/278 (25%), Gaps = 35/278 (12%)

Query: 54  GTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDK 110
           G   +S  E+          E   Y    K       +       + F+   +L K    
Sbjct: 1   GFDCASKTEIDQVLSMGTSPERIIYAQPCKTNSYVRYVKAMGVKQMTFDNADELRKVARL 60

Query: 111 AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170
                  + +  +   S  +  +       +          +    NV G+ FH      
Sbjct: 61  FPDAELFLRIMTDDESSLCRLSMKFGAAKDATNELLAT--AKDLGLNVVGVSFHVGSGAS 118

Query: 171 SFLCFSAMLKNIEKEF---GHFITQIEWISLGGGI-HFTDKDYPVKDFCQRLKEFSEKYS 226
             + F   + +  + F     +  Q++ + +GGG    T +D          + F    +
Sbjct: 119 DPMAFYKAVYDAHEVFEQGRAYGFQMKTLDIGGGFCGDTFEDMAAVLRGALDEYFPVSSN 178

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP---------------- 270
           V I  EPG   V+   T+   ++            +     ++                 
Sbjct: 179 VNIIAEPGRYYVSAAFTIACNIIARRTVEDPAAEGEKCYMVYISGGLYGNFSSIMFDHQH 238

Query: 271 ---------DYLLYQESATIYPNTGP-YTAMVCGRSCL 298
                       LY   +      G      + G +C 
Sbjct: 239 PVAKVLRAGPATLYDCPSANACPDGEGIRYSIWGPTCD 276


>gi|219114479|ref|XP_002176410.1| ornithine decarboxylase [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217402656|gb|EEC42646.1| ornithine decarboxylase [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 564

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/387 (10%), Positives = 93/387 (24%), Gaps = 63/387 (16%)

Query: 6   YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-------TTSS 58
           ++L+D   L++ L +     +   V  L  ++  A   +   L++               
Sbjct: 177 FWLVDLSSLVHRLASWKRTFR--DVVFLYQVRHNANAKLLQILHRSGAVGLVTTTKADI- 233

Query: 59  SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT----------IIFNTVSQLNKFK 108
              +  L  E+F     +    + +C +    +              +  +    + +F 
Sbjct: 234 ---QACLAAERFLDPRCSRMPCWDNCGVTCKPNGYIRKLVCDAHSRVLAVDGPDDVRRFA 290

Query: 109 DKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE--SEIKNVNGLMFHNN 166
                   +  + I+  V      L      + +L E     +   S    V G+ F  +
Sbjct: 291 TLINNFVARKSV-IDLPVLQYMIRLPQNLAEWKQLTEDTLQAVSEGSTESQVVGVSFDLS 349

Query: 167 CENKSFLCFSAMLKNIEK---------------EFGHFITQIEWISLGGGIHFTDKDYPV 211
             +         L   E                        +E  S         +    
Sbjct: 350 AASGEENSRIRQLAVEELLDFLSSQETVTAEKLRVDLTGVPLEDGSFAAETVSLWQYLQS 409

Query: 212 KDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS 264
                ++   +               +   +    +    N   +D           +  
Sbjct: 410 MPNVDKVTVDATHLLVSPAASLCTRIIGFRQTETKSNEIRNHYYIDDGCYGSLYQGAEEG 469

Query: 265 VEAHV-----PDYLLYQESATIYPNTGPYTAM---VCGRSCLAGDIFGEFHFEKPVKIGD 316
               +        +   +++         +     V G +C   D          +   D
Sbjct: 470 SFCPLPLISSRPSVNSNDTSGAADFAEETSVQLSTVWGPTCDGLDKVCTDIPLPLLHRDD 529

Query: 317 RISFED---VAGYNINRKNWFNGINMP 340
            + F +   V G        FNG + P
Sbjct: 530 WLVFPNIKSVGG----LCTAFNGFDPP 552


>gi|169245562|gb|ACA50827.1| LysA [Agrobacterium rhizogenes]
          Length = 157

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/153 (14%), Positives = 37/153 (24%), Gaps = 21/153 (13%)

Query: 190 ITQIEWISLGGGIHFTDKDY-----------PVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
              +E I LGGG+                   + D    ++         I +EPG  + 
Sbjct: 3   GRPLETIDLGGGLGIPYFAGETPLDLATVSAAIPDLKALVQAHPLITDAHIIVEPGRFLA 62

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY----------LLYQESATIYPNTGPY 288
                    V  +  +     +V      H                   +          
Sbjct: 63  GPGGLYVAEVNSVKSSRGTTFVVTDGGMHHHLAASGNLGQIVKRNYPIVAPAKMQADHDE 122

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321
           TA + G  C   D          +K GD ++  
Sbjct: 123 TATIVGPLCTPLDTLARNAALPKLKTGDLLAIL 155


>gi|108563397|ref|YP_627713.1| arginine decarboxylase [Helicobacter pylori HPAG1]
 gi|107837170|gb|ABF85039.1| arginine decarboxylase [Helicobacter pylori HPAG1]
          Length = 615

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/314 (11%), Positives = 91/314 (28%), Gaps = 48/314 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL--NQYMD 53
           P  +     +   + +      +A          K +  LK       +F  +   + +D
Sbjct: 49  PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLD 108

Query: 54  -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106
            G  + S  E+++       +       +KD E+         + +  T+    +++L  
Sbjct: 109 YGLEAGSKSELIIAMSYTNPKAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168

Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155
               A++       +I       S    + A      S+ G    + +E+          
Sbjct: 169 IIAVAKQNDFVACPKIGIRIRLHSAGTGVWAKSGGINSKFGLSSTEVLEAIRLLEENDLL 228

Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
           ++ + + FH   +                   +        +  +++GGG+      +  
Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288

Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                                + +  ++    I++E G  I  N   L   VL++  +  
Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348

Query: 257 NLVIVDSSVEAHVP 270
           N   +      + P
Sbjct: 349 NEKSLKIKENNNPP 362



 Score = 40.1 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%)

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284
           +L   +A+       +  +L I E ++   +++ S    +PDY   +++  + P      
Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474

Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337
               +A +   +C +            F   + I +    ++F  V  Y        N  
Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534

Query: 338 NMPTI--AVKNVDGTIKA 353
             PT    V +  G  + 
Sbjct: 535 THPTEFSVVFDEKGDYEV 552


>gi|94265402|ref|ZP_01289155.1| Arginine decarboxylase [delta proteobacterium MLMS-1]
 gi|93454104|gb|EAT04436.1| Arginine decarboxylase [delta proteobacterium MLMS-1]
          Length = 642

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/264 (8%), Positives = 62/264 (23%), Gaps = 32/264 (12%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYM---- 52
           P  +  +  L N ++                     +  +K      + + + +      
Sbjct: 65  PMLIRFQDLLRNRVERINRAFAEAIAEAEYQNRFSGVYPVKVNQLREVVEEVIEAGRPFH 124

Query: 53  DGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTI-------IFNTVSQL 104
            G    S  E+           +      YKD +   +      +       +       
Sbjct: 125 HGLEVGSKPELHAALALHEDPRSLIVCNGYKDRDYIRMALLGRKLDKKVILVVERVEEVE 184

Query: 105 NKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------K 156
               +  +     +       +S  K          ++ G    D + +           
Sbjct: 185 RIIAEVDKMQVVPLIGFRVRLMSGGKGKWEKSGGENAKFGLSSMDIMRASHLLKEAGLAA 244

Query: 157 NVNGLMFHNNCEN---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213
           N+  + FH   +     +             +       +E++ +GGG+           
Sbjct: 245 NLKLVHFHIGSQVPDALTIKKAVREGAMFYAKLAKMGHGLEYLDVGGGLGVDYDG-SRTT 303

Query: 214 FCQRLKEFSEKYSVQIYLEPGEAI 237
           F   +     +Y+  +     +  
Sbjct: 304 FHSSINYSLNEYARDVIYNIMDVC 327


>gi|302753700|ref|XP_002960274.1| hypothetical protein SELMODRAFT_139552 [Selaginella moellendorffii]
 gi|300171213|gb|EFJ37813.1| hypothetical protein SELMODRAFT_139552 [Selaginella moellendorffii]
          Length = 627

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/296 (12%), Positives = 83/296 (28%), Gaps = 47/296 (15%)

Query: 24  IRKNAGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK--FGGETHAY 77
                  + +  +KC     + + + ++ D    G  + S  E+++   K     +    
Sbjct: 39  FFSTRHFQGVFPIKCNHDRYLLEDIVKFGDQCKFGLEAGSKPELLIAIAKLRGSKDALLI 98

Query: 78  NVAYKDCEIDAVLSNCD------------TIIFNTVSQLNKFKDKAQKLHKKIGLRINPS 125
              YK    D      +             I+   + +L       + L  +  + +   
Sbjct: 99  CNGYKAFICDPDRVYIESVLLARQLGVNAIIVLEQMEELEMVIQACRILKVRPMVGVRAK 158

Query: 126 VSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNVNGLMFHNNCENKSFLCFS 176
           +S         +     + G    + +              +  L FH   +  S     
Sbjct: 159 LSTRHTGHWGGSSGDKGKFGLTVTEIVRVVYTLRKEGMLDCLQLLHFHIGSQIPSISIIK 218

Query: 177 AMLKNIEKEFGH---FITQIEWISLGGGIHFTDK---------------DYPVKDFCQRL 218
             ++     F         +++I +GGG+                    +Y        +
Sbjct: 219 EAMREGSHIFCELALMGAPMQYIDVGGGLGIDYDGSKTQSSASTNYSMQNYANDVVAALV 278

Query: 219 KEFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDY 272
                K   Q  +  E G A+ ++ + L   VL   E  +N  + +  V  +   Y
Sbjct: 279 DACILKGVAQPVIISESGRALASHHSVLVFDVLSTFERSENTSLANLEVLTNNSPY 334


>gi|94269477|ref|ZP_01291472.1| Arginine decarboxylase [delta proteobacterium MLMS-1]
 gi|93451200|gb|EAT02109.1| Arginine decarboxylase [delta proteobacterium MLMS-1]
          Length = 642

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/264 (8%), Positives = 62/264 (23%), Gaps = 32/264 (12%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYM---- 52
           P  +  +  L N ++                     +  +K      + + + +      
Sbjct: 65  PMLIRFQDLLRNRVERINRAFAEAIAEAEYQNRFSGVYPVKVNQLREVVEEVIEAGRPFH 124

Query: 53  DGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTI-------IFNTVSQL 104
            G    S  E+           +      YKD +   +      +       +       
Sbjct: 125 HGLEVGSKPELHAALALHEDPRSLIVCNGYKDRDYIRMALLGRKLDKKVILVVERVEEVE 184

Query: 105 NKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------K 156
               +  +     +       +S  K          ++ G    D + +           
Sbjct: 185 RIIAEVDKMQVVPLIGFRVRLMSGGKGKWEKSGGENAKFGLSSMDIMRASHLLKEAGLAA 244

Query: 157 NVNGLMFHNNCEN---KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKD 213
           N+  + FH   +     +             +       +E++ +GGG+           
Sbjct: 245 NLKLVHFHIGSQVPDALTIKKAVREGAMFYAKLAKMGHGLEYLDVGGGLGVDYDG-SRTT 303

Query: 214 FCQRLKEFSEKYSVQIYLEPGEAI 237
           F   +     +Y+  +     +  
Sbjct: 304 FHSSINYSLNEYARDVIYNIMDVC 327


>gi|305677836|pdb|3NZP|A Chain A, Crystal Structure Of The Biosynthetic Arginine
           Decarboxylase Spea From Campylobacter Jejuni, Northeast
           Structural Genomics Consortium Target Br53
 gi|305677837|pdb|3NZP|B Chain B, Crystal Structure Of The Biosynthetic Arginine
           Decarboxylase Spea From Campylobacter Jejuni, Northeast
           Structural Genomics Consortium Target Br53
          Length = 619

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 52/289 (17%), Positives = 86/289 (29%), Gaps = 45/289 (15%)

Query: 12  QKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEV 63
           +++ N        RK  G K     +  LK     G    L +       G  + S  E+
Sbjct: 57  KQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAEL 116

Query: 64  MLGHEKFGGETHAYNVAYKDC------EIDAVLSNCDTIIFNTVSQLNKFKDKA---QKL 114
           +L               +KD        I A   +  T+    +++L    D A    K 
Sbjct: 117 LLAXAYNNEGAPITVNGFKDRELINIGFIAAEXGHNITLTIEGLNELEAIIDIAKERFKP 176

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNN 166
              IGLR+    S    I A      S+ G    + IE+          +    + FH  
Sbjct: 177 KPNIGLRVRL-HSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFTXIHFHLG 235

Query: 167 CENKSFLCFSAMLKN---IEKEFGHFI-TQIEWISLGGGIHFTDKDY------------- 209
            +          L     I  E        ++ I+LGGG+      +             
Sbjct: 236 SQITEIHPLKKALNEAGNIYTELRKXGAKNLKAINLGGGLAVEYSQFKNEKSRNYTLREY 295

Query: 210 --PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
              V    + + E  +     I++E G  +  N   L   VL++     
Sbjct: 296 ANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEY 344


>gi|210135195|ref|YP_002301634.1| arginine decarboxylase [Helicobacter pylori P12]
 gi|210133163|gb|ACJ08154.1| arginine decarboxylase [Helicobacter pylori P12]
          Length = 615

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/314 (11%), Positives = 91/314 (28%), Gaps = 48/314 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL--NQYMD 53
           P  +     +   + +      +A          K +  LK       +F  +   + +D
Sbjct: 49  PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLD 108

Query: 54  -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106
            G  + S  E+++       +       +KD E+         + +  T+    +++L  
Sbjct: 109 YGLEAGSKSELIIAMSYTNPKAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168

Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155
               A++       +I       S    + A      S+ G    + +E+          
Sbjct: 169 IIAVAKQNEFLACPKIGIRIRLHSAGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228

Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
           ++ + + FH   +                   +        +  +++GGG+      +  
Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKY 288

Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                                + +  ++    I++E G  I  N   L   VL++  +  
Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348

Query: 257 NLVIVDSSVEAHVP 270
           N   +      + P
Sbjct: 349 NEKSLKIKENNNPP 362



 Score = 40.1 bits (92), Expect = 0.51,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%)

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284
           +L   +A+       +  +L I E ++   +++ S    +PDY   +++  + P      
Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474

Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337
               +A +   +C +            F   + I +    ++F  V  Y        N  
Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534

Query: 338 NMPTI--AVKNVDGTIKA 353
             PT    V +  G  + 
Sbjct: 535 THPTEFSVVFDEKGDYEV 552


>gi|56377971|dbj|BAD74163.1| arginine decarboxylase [Malus x domestica]
          Length = 728

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/236 (12%), Positives = 65/236 (27%), Gaps = 33/236 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +     L + L++               +  + +  +KC     + + + ++     
Sbjct: 112 PLIVRLPDVLKDRLESLQGAFDLAIRSHDYGSHYQGVYPVKCNQDRFVVEDIVKFGSPFR 171

Query: 54  -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109
            G  + S  E++L          +       +KD E  ++      +  NTV  L + ++
Sbjct: 172 FGLEAGSKPELLLAMSCLCKGHPDALLICNGFKDLEYISLALFARKLALNTVIVLEQEEE 231

Query: 110 KAQKLHKKIGLRINPSVSY-------SKFILADPNRPFSRLGEKCKDKIESEI------- 155
               +     L + P +                 +    + G      +           
Sbjct: 232 LDLVVDFSQKLGVRPVIGVRAKLKTKHSGHFGSTSGEEGKFGLTTTQILRVVKKLDKLGM 291

Query: 156 -KNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207
                 L FH   +  S        +    I  E       ++ I +GGG+     
Sbjct: 292 LDCFQLLHFHTGSQIPSTALLADGVSEASQIYCELVRLGAHMKVIDIGGGLGIDYD 347


>gi|308184772|ref|YP_003928905.1| arginine decarboxylase [Helicobacter pylori SJM180]
 gi|308060692|gb|ADO02588.1| arginine decarboxylase [Helicobacter pylori SJM180]
          Length = 615

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/314 (11%), Positives = 88/314 (28%), Gaps = 48/314 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL--NQYMD 53
           P  +     +   + +       A          K +  LK       +   +   + +D
Sbjct: 49  PLLVRFPHLVQKQIKSLFDAFSLAIKEYQYSGAFKAVFPLKVNQMPSFVLPLVQGAKGLD 108

Query: 54  -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106
            G  + S  E+++               +KD E+         + +  T+    +++L  
Sbjct: 109 YGLEAGSKSELIIAMSYTNPTAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168

Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155
               A++       +I       S    + A      S+ G    + +E+          
Sbjct: 169 IIAVAKQNDFVACPKIGIRIRLHSAGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228

Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
           ++ + + FH   +                   +        +  +++GGG+      +  
Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288

Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                                + +  ++    I++E G  I  N   L   VL++  +  
Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348

Query: 257 NLVIVDSSVEAHVP 270
           N   +      + P
Sbjct: 349 NEKSLKIKENNNPP 362



 Score = 40.5 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%)

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284
           +L   +A+       +  +L I E ++   +++ S    +PDY   +++  + P      
Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474

Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337
               +A +   +C +            F   + + +    ++F  V  Y        N  
Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDVDEEEYFLAFFLVGAYQEVLGMKHNLF 534

Query: 338 NMPTI--AVKNVDGTIKA 353
             PT    V +  G  + 
Sbjct: 535 THPTEFSVVFDEKGDYEV 552


>gi|46199579|ref|YP_005246.1| arginine decarboxylase [Thermus thermophilus HB27]
 gi|46197205|gb|AAS81619.1| arginine decarboxylase [Thermus thermophilus HB27]
          Length = 630

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/312 (13%), Positives = 83/312 (26%), Gaps = 48/312 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVK--------LLLALKCFAAWGMFDTLNQYM---- 52
           P  L   Q L   +         A  K         +  +K      + +T+ +      
Sbjct: 63  PLVLRFPQILEARVRALNEAFLEAMAKYGYQGTYRGVYPVKVNQRRLVLETVARAGRPYH 122

Query: 53  DGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK--- 108
            G  + S  E+ L        E       +KD +   +      +  N V  L KF    
Sbjct: 123 LGLEAGSKPELALILAQDLSEEALITTNGFKDDDFVRLALMGRKLGRNVVITLEKFAELF 182

Query: 109 ---DKAQKLHKKIGLRINPSVSYSKFILADPN-RPFSRLGEKCKDKIES--------EIK 156
                +++L  K  L I   +        + +    ++ G    + + +         + 
Sbjct: 183 RVLRLSKELGVKPLLGIRYKLKAKGAGQWEASGGENAKFGLTTPEIVRAVEVLQEEGLLD 242

Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------ 207
            +  L  H   +    +              +       + +++LGGG+           
Sbjct: 243 ALVMLHAHIGSQVTDIRRIKAAVREAAQTYVQLRKLGAPLRYLNLGGGLAVDYDGSKTNF 302

Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                         +    + + E   +    +  E G AI      L   V+D+     
Sbjct: 303 YASANYTLSEYAENLVYVTKEVVEAQGEPHPILVTESGRAITAYHEVLVLQVIDVIAPPG 362

Query: 257 NLVIVDSSVEAH 268
                    EAH
Sbjct: 363 EARPSPPPPEAH 374


>gi|85711055|ref|ZP_01042115.1| arginine decarboxylase [Idiomarina baltica OS145]
 gi|85694968|gb|EAQ32906.1| arginine decarboxylase [Idiomarina baltica OS145]
          Length = 636

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/313 (9%), Positives = 84/313 (26%), Gaps = 48/313 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIR------KNAGVKLL--LALKCFAAWGMFDTLNQYMD--- 53
           P  +     L + ++                 +      +K      + + +    +   
Sbjct: 61  PAVIRFHDILRSQVEIINETFNKCIEEAEYNGQYCGVFPIKVNQMREVVEEIMDAGEPYN 120

Query: 54  -GTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCD------TIIFNTVSQLN 105
            G  + S  E+M         E       YKD +   +            I+    S+L 
Sbjct: 121 YGLEAGSKPELMAVMAYNDNPEALTVLNGYKDKDYLTLALLGRQLKRKMIIVVEKFSELE 180

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------K 156
                A++L  +  + +   +          +     + G    + + +           
Sbjct: 181 MLIPLAKQLGVEPMIGLRSKMMVRSSGKWAGSSGDRAKFGLSIAEILNAIERLREEDMLH 240

Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY---- 209
               L FH   +    +      +    +  +      ++E++ +GGG+           
Sbjct: 241 CAKLLHFHIGSQLSDIRKIKEAVSEGARLYAKLVQEGVELEYLDIGGGLGIDYDGTSSTT 300

Query: 210 -------------PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                         V    +++ +        I  E G A+  + + + + ++       
Sbjct: 301 DSSRNYSTEEYVADVVWGIKQVCDLENVPHPNIVSESGRAMTAHHSCVVSNIVGEVNPSG 360

Query: 257 NLVIVDSSVEAHV 269
               + ++ + H+
Sbjct: 361 TDFDLSATEDEHI 373


>gi|88802967|ref|ZP_01118494.1| arginine decarboxylase [Polaribacter irgensii 23-P]
 gi|88781825|gb|EAR13003.1| arginine decarboxylase [Polaribacter irgensii 23-P]
          Length = 482

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/392 (10%), Positives = 109/392 (27%), Gaps = 61/392 (15%)

Query: 13  KLLNNLDT----ALYIRKNAGVKL--LLAL--KCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           K+  N++               K     +   K      + +   +      +SS +++ 
Sbjct: 52  KISENINKAKGWFQASIDKHNYKGNYFYSYCTKSSHFKHVLNEALKNDIHIETSSAFDID 111

Query: 65  LGH---EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL------- 114
           +     ++   +   + +         + +  + I     + +    +  +         
Sbjct: 112 IVLNLKKEGKIKDSTFVICNGFKRDQYIQNIGNLINSGHENCIPIIDNFEELPLLQKETS 171

Query: 115 -HKKIGLRINPSVSYSKFILADPNRPFSRLGEKC--KDKIESEIKNVNGLMFHNNCENK- 170
              K+G+RI                   +       ++  ++E   +  L F  N   + 
Sbjct: 172 KPFKVGIRIASEEEPKFEFYTSRLGIGYKNIVSFYEREIADNEQVELKMLHFFINTGIRD 231

Query: 171 --SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKY 225
              +        N+          ++ +++GGG    +    D+  +     +    ++ 
Sbjct: 232 NAYYWNELMKCLNVYINLKKVCPTLDSLNIGGGFPIKNSLAFDFDYQYMIDEIVHQIKQA 291

Query: 226 S-------VQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPDYLLYQ 276
                     I+ E G   V  +      +L      + +   +++SS    +PD     
Sbjct: 292 CDEAEVSVPNIFTEFGSFTVGESGATIYEILYQKKQNDRERWNMINSSFITTLPDSWAIN 351

Query: 277 ES----ATIYPNTGPYTAMVCGRSCLAGD-----------IFGEFHFEKPVKIGDRISFE 321
           +          N      ++ G +C + D               +    P+ IG    F 
Sbjct: 352 KRFIMLPINKWNKQYERVLLGGLTCDSDDYYNSEQHINGIYLPVYEKNNPLYIG----FF 407

Query: 322 DVAGYNINRKNWFNG-----INMPTIAVKNVD 348
           +   Y  +    F G     I  P   + + D
Sbjct: 408 NTGAYQESIG-GFGGLQHCLIPHPKHLLLDRD 438


>gi|115719588|ref|XP_001180893.1| PREDICTED: similar to ornithine decarboxylase, partial
          [Strongylocentrotus purpuratus]
 gi|115802940|ref|XP_001196287.1| PREDICTED: similar to ornithine decarboxylase, partial
          [Strongylocentrotus purpuratus]
          Length = 94

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/55 (16%), Positives = 21/55 (38%), Gaps = 2/55 (3%)

Query: 6  YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL 60
          +++ D   ++       ++R    V+   A+KC     +   L+    G   +S 
Sbjct: 42 FFIGDLGDIIQKHR--KWLRNLPRVEPHYAVKCNPDLHVLKLLSGLNLGFDCASK 94


>gi|329895587|ref|ZP_08271083.1| Biosynthetic arginine decarboxylase [gamma proteobacterium
           IMCC3088]
 gi|328922266|gb|EGG29616.1| Biosynthetic arginine decarboxylase [gamma proteobacterium
           IMCC3088]
          Length = 679

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 90/306 (29%), Gaps = 48/306 (15%)

Query: 11  KQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD----GTTSS 58
           +  L + +        NA          + +  +K      + + +  Y      G  + 
Sbjct: 113 ENLLDHRISAINEAFANAIASAGYNNEYRGVFPIKVNQQCHVVEEIADYGARYHHGLEAG 172

Query: 59  SLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
           S  E+++   +     +      YKD E   +      +  N    L    +    + + 
Sbjct: 173 SKAELIIALTQLKDRHSLIICNGYKDQEFIELGLYARKMGINCFFVLETLGELDIIIERS 232

Query: 118 IGLRINPSVSYS-------KFILADPNRPFSRLGEKCKDKI--------ESEIKNVNGLM 162
             L I P++          +    + +   S  G      +         + +  +  L 
Sbjct: 233 EALGIEPAIGARIRLSSMVEGHWNEDSGDRSIFGLSTDSLLCVVDKLRAHNMLHCMQMLH 292

Query: 163 FHNNCENKSFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDK----------DY 209
            H   +  +     +                  + +I LGGG+    +          +Y
Sbjct: 293 CHLGSQIPNIRNIRSGVLEACRYYTGLVAEGAAMGYIDLGGGLAVDYEGRRTNETHSMNY 352

Query: 210 PVKDFCQRLKEFSEKY-------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD 262
            + ++C  + E  ++           +  E G A+V  ++ L   +LD+ ++    +   
Sbjct: 353 GLNEYCANIIETLQESLDSEDVPHPVVITESGRALVAYSSMLLFNILDVRDHKPGKLPET 412

Query: 263 SSVEAH 268
              E H
Sbjct: 413 IPDEGH 418


>gi|254423696|ref|ZP_05037414.1| arginine decarboxylase [Synechococcus sp. PCC 7335]
 gi|196191185|gb|EDX86149.1| arginine decarboxylase [Synechococcus sp. PCC 7335]
          Length = 681

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/313 (12%), Positives = 96/313 (30%), Gaps = 48/313 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVK-----LL---LALKCFAAWGMFDTLNQYM---- 52
           P  +   + L + L+        A  +     +      +KC     + + L ++     
Sbjct: 105 PVLIRFSEILEDRLERINACFAKAIARYSYEGVYQGVFPVKCNQQRHIVEDLVRFGKAFQ 164

Query: 53  DGTTSSSLYEVMLGHEKF--GGETHAYNVAYKDCEIDAVLSNCD-----TIIFNTVSQLN 105
            G  + +  E+M+        G     N    +  I+  +          I+   V ++ 
Sbjct: 165 FGLEAGTKPELMIALASLNTPGALIICNGYKDESYIETAMLGQRLGQKPIIVLEQVEEVA 224

Query: 106 KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIK 156
                A++L  +  L +   ++         +     + G    + I           + 
Sbjct: 225 VAIATAKRLGIQPNLGVRAKLAAKGSGRWGTSAGDRAKFGLTIPEIITVVEKLKAADMLD 284

Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTD------- 206
           ++  L FH   +  +       ++   + +         + ++ +GGG+           
Sbjct: 285 SLQLLHFHIGSQVNAISVIKDAMREACQIYVELVSLGAPMGYLDVGGGLGVDYDGSKTSS 344

Query: 207 ---KDYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
              K+Y ++++   +    +            +  E G AI ++ + L   VL  SE I 
Sbjct: 345 QGSKNYSIQNYANDVVAHVKDACVARELPMPTLVSESGRAIASHQSVLIFDVLGTSEAIP 404

Query: 257 NLVIVDSSVEAHV 269
                    E ++
Sbjct: 405 EDPAPYQDGEHNL 417


>gi|332519087|ref|ZP_08395554.1| Orn/DAP/Arg decarboxylase 2 [Lacinutrix algicola 5H-3-7-4]
 gi|332044935|gb|EGI81128.1| Orn/DAP/Arg decarboxylase 2 [Lacinutrix algicola 5H-3-7-4]
          Length = 465

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 54/394 (13%), Positives = 113/394 (28%), Gaps = 61/394 (15%)

Query: 13  KLLNNLDT----ALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYMDGTTSSSLY--- 61
           ++ NN+           +    K         K      + +          +SS +   
Sbjct: 52  QISNNIQRAKQWFANAIEKHDYKGTYNYCYCTKSSHFKHVLNEALTNNIHIETSSAFDID 111

Query: 62  --EVMLGHEKFGGETHAYNVAYKDCEI----DAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
             E +    K   ET   +  +K  +       +++N        +    +    + ++ 
Sbjct: 112 IVENLKAEGKITNETFVISNGFKRAQYVTNIARLINNGQKNCIPIIDNYEEIDLLSAEIK 171

Query: 116 KKIGLRINPSVSYSKFILADPNRPF----SRLGEKCKDKIESEIKNVNGLMFHNNCENKS 171
               + I  +           +R      + +         +E  N+  L F  N   + 
Sbjct: 172 GNYNIGIRIASEEEPKFEFYTSRLGIGYKNIVPFYKNKIQNNEKVNLKMLHFFINTGIRD 231

Query: 172 FLCFSAMLKNI---EKEFGHFITQIEWISLGGGIH-------FTDKDYPVKDFCQRLKEF 221
              +   L+               +  +++GGG           D +Y V +   ++K  
Sbjct: 232 NAYYWNELQKCLKVYTSLKKICPSLNSLNIGGGFPIKNSLAFDFDYEYMVDEIVNQIKLT 291

Query: 222 SEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLLYQ 276
            E+       I+ E G   V  +      VL   +        +++SS    +PD     
Sbjct: 292 CEEEEVDVPNIFTEFGSFTVGESGGAIYEVLYQKQQNDREKWNMINSSFITTLPDTWAIN 351

Query: 277 ES----ATIYPNTGPYTAMVCGRSCLAGDI-----------FGEFHFEKPVKIGDRISFE 321
           +     A     +     ++ G +C + D              +++ +KP+ IG    F 
Sbjct: 352 KRFIMLAINRWESSYERVLLGGLTCDSDDYYNSEQHMNAIYLPKYNKDKPLYIG----FF 407

Query: 322 DVAGYNINRKNWFNG-----INMPTIAVKNVDGT 350
           +   Y       F G     I  P   + N D  
Sbjct: 408 NTGAYQETIG-GFGGLQHCLIPSPKHILINKDKD 440


>gi|256822352|ref|YP_003146315.1| arginine decarboxylase [Kangiella koreensis DSM 16069]
 gi|256795891|gb|ACV26547.1| arginine decarboxylase [Kangiella koreensis DSM 16069]
          Length = 644

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/293 (12%), Positives = 82/293 (27%), Gaps = 54/293 (18%)

Query: 12  QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD---------- 53
             L N +++       A           +   +K      + + + Q             
Sbjct: 73  DILHNRVNSLCEAFNQAIKEYEFQGRYTICYPIKVNQQRRVVEEIVQSQAAINNNNDKQI 132

Query: 54  GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEIDAVLS-----NCDTIIFNTVSQLNK 106
           G  + S  E+M  L   +    T   N       I   L      +   I+   +++L  
Sbjct: 133 GLEAGSKPELMAVLALSEHTNSTIVCNGYKDREYIRTALIGTQLGHKVYIVVEKLTELQL 192

Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKN 157
             ++A+ +  K  + +   ++         +     + G      +          ++  
Sbjct: 193 VLEEAESMGVKPTIGVRARLASKGESKWQTSGGDHSKFGLSASQILRLVETLQASDQVDI 252

Query: 158 VNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK------- 207
              L FH   +  S       LK   + +         +E + +GGG+    +       
Sbjct: 253 FKLLHFHLGSQITSIRDIQNALKECARFYAELHALGVPVETVDVGGGLGVDYEGTRSQSH 312

Query: 208 ---DYPVKDFCQRLKEFSEK-------YSVQIYLEPGEAIVTNTTTLNTTVLD 250
              +Y + ++   +                 I  E G A+  +   L   V+D
Sbjct: 313 CSINYSLSEYANNVVWAFYDVANENDLPHPNIITESGRALTAHHAVLIANVID 365


>gi|15982891|gb|AAL09792.1| AT4g34710/T4L20_290 [Arabidopsis thaliana]
          Length = 711

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/237 (13%), Positives = 69/237 (29%), Gaps = 35/237 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +     L N L+                +  + +  +KC     + + + ++     
Sbjct: 107 PLIVRFPDVLKNRLECLQSAFDYAIKSQGYDSHYQGVYPVKCXQDRFVVEDIVKFGSSFR 166

Query: 54  -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
            G  + S  E++L          +       +KD E  ++            I+     +
Sbjct: 167 FGLEAGSKPEILLAMSCLCKGSPDAFLVCNGFKDAEYISLALLGRKLALNTVIVLEQEEE 226

Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   + +QK++ +   GLR      +S    +       + G      +          
Sbjct: 227 LDLVIELSQKMNVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQIVRVVRKLRQSG 285

Query: 156 --KNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207
               +  L FH   +  S        A    +  E       ++ I +GGG+     
Sbjct: 286 MLDCLQLLHFHIGSQIPSTSLLSDGVAEAAQLYCELVRLGAHMKVIDIGGGLGIDYD 342


>gi|2347054|emb|CAA65585.1| arginine decarboxylase [Vitis vinifera]
          Length = 630

 Score = 54.8 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/236 (12%), Positives = 67/236 (28%), Gaps = 33/236 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +     L N L++               +  + +  +KC     + + + ++     
Sbjct: 27  PLIVRLPDVLQNRLESLQSAFDFAIQSQGYESHYQGVFPVKCNQDRFIVEDVVKFGSAFR 86

Query: 54  -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
            G  + S  E++L          E       +KD +  A+            I+     +
Sbjct: 87  FGLEAGSKPELLLAMSCLCKGNPEALLVCNGFKDADYIALALVARKLALNTVIVLEQEEE 146

Query: 104 LNKFKDKAQKLHKKIGLRINPSVSYSK-FILADPNRPFSRLGEKCKDKIESEI------- 155
           L+   + +QKL  +  + +   +           +    + G      +           
Sbjct: 147 LDLVINLSQKLSVRPVIGVRAKLRTKHAGHFGSTSGEKGKFGLTTTQILRVVRKLEQAGM 206

Query: 156 -KNVNGLMFHNNCENKSFL---CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207
             ++  L FH   +  S        +    I  E       +  I +GGG+     
Sbjct: 207 LDSLQLLHFHIGSQIPSTDLLADGVSEAAQIYCELVRLGAHMRVIDIGGGLGIDYD 262


>gi|91214945|ref|ZP_01251917.1| putative arginine decarboxylase [Psychroflexus torquis ATCC 700755]
 gi|91186550|gb|EAS72921.1| putative arginine decarboxylase [Psychroflexus torquis ATCC 700755]
          Length = 466

 Score = 54.8 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 50/394 (12%), Positives = 105/394 (26%), Gaps = 61/394 (15%)

Query: 13  KLLNNLDT----ALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           K+  N+           +    +         K      + D   +      +SS +++ 
Sbjct: 52  KISENIHRAQKWFKDAIEKNNYRATYNYCYCTKSSHFKHVLDEALKNDIHIETSSAFDID 111

Query: 65  LG-----HEKFGGETHAYNVAYKDCEI------DAVLSNCDTIIFNTVSQLNKFKDKAQK 113
           +        K   +T+     +K  +            + + I      +      KA  
Sbjct: 112 IVNSLKERGKITKDTYVICNGFKRDQYVSNIANLINNGHQNCIPVIDNYEEIDLLTKAID 171

Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKC--KDKIESEIKNVNGLMFHNNCENKS 171
              KIG+RI                   +            ++   +  L F  N   + 
Sbjct: 172 KDFKIGIRIASEEEPKFEFYTSRLGIGYKNIIPFYEDQIKNNDQVELKMLHFFINTGIRD 231

Query: 172 FLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKY 225
              +   L+               ++ +++GGG    +    +Y  +   + +    +  
Sbjct: 232 NAYYWNELQKCLRVYTRLKKVCPSLDSLNIGGGFPIKNSLAFEYDYQYIIEEVVSQIKLT 291

Query: 226 S-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLLYQ 276
                     I+ E G   V  +      VL   +        I++SS    +PD     
Sbjct: 292 CEEEEVPVPHIFTEFGSFTVGESGGAIYEVLYQKQQNDREKWNIINSSFITTLPDSWAIS 351

Query: 277 ESATI----YPNTGPYTAMVCGRSCLAGDI-----------FGEFHFEKPVKIGDRISFE 321
           +   +      N      ++ G +C + D              ++  E P+ IG    F 
Sbjct: 352 KRFIMLALNRWNDRYERVLLGGLTCDSDDYYNSEQHVNAIYLPKYEKENPLYIG----FF 407

Query: 322 DVAGYNINRKNWFNG-----INMPTIAVKNVDGT 350
           +   Y       F G     I  P   +   +  
Sbjct: 408 NTGAYQETIG-GFGGLQHCLIPSPKHILIQKNDD 440


>gi|221105722|ref|XP_002170379.1| PREDICTED: similar to ornithine decarboxylase, partial [Hydra
           magnipapillata]
          Length = 127

 Score = 54.8 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 40/129 (31%), Gaps = 5/129 (3%)

Query: 36  LKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEK-FGGETHAYNVAY--KDCEIDAVLSN 92
           +K      +   L +       +S  E+    +     E   +      +     A   N
Sbjct: 1   VKSNPNHVVIALLARLGVNFDCASKCEIETVLDMDVDPERIIFANPCKQESHVKYAREKN 60

Query: 93  CDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152
              + F++  +L K K+        I ++++ S S  K          +   +K     +
Sbjct: 61  VRKMTFDSEGELYKIKENFPGAELVIRIKVDDSNSAYKLGRKFGASLENT--QKLLQLAK 118

Query: 153 SEIKNVNGL 161
               NV G+
Sbjct: 119 DLDLNVTGV 127


>gi|317011227|gb|ADU84974.1| arginine decarboxylase [Helicobacter pylori SouthAfrica7]
          Length = 615

 Score = 54.8 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/314 (11%), Positives = 86/314 (27%), Gaps = 48/314 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL---NQYM 52
           P  +     +   + +       A          K +  LK       +   +       
Sbjct: 49  PLLVRFPHLVQKQIKSLFDAFSLAIKEYQYSGAFKAVFPLKVNQMPSFVLPLVQGAKGLN 108

Query: 53  DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106
            G  + S  E+++       +       +KD E+         + +  T+    +++L  
Sbjct: 109 YGLEAGSKSELIIAMSYTNPKAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168

Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155
               A++       +I       S    + A      S+ G    + +E+          
Sbjct: 169 IIAVAKQNEFLACPKIGIRIRLHSTGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228

Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
           ++ + + FH   +                   +        +  +++GGG+      +  
Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288

Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                                + +  ++    I++E G  I  N   L   VL++  +  
Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348

Query: 257 NLVIVDSSVEAHVP 270
           N   +      + P
Sbjct: 349 NEKSLKIKENNNPP 362



 Score = 40.1 bits (92), Expect = 0.52,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%)

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284
           +L   +A+       +  +L I E ++   +++ S    +PDY   ++S  + P      
Sbjct: 415 HLIVKKAVQLLYFKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQSFPVMPLNKLDE 474

Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337
               +A +   +C +            F   + + +    ++F  V  Y        N  
Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDVDEEEYFLAFFLVGAYQEVLGMKHNLF 534

Query: 338 NMPTI--AVKNVDGTIKA 353
             PT    V +  G  + 
Sbjct: 535 THPTELSVVFDEKGDYEV 552


>gi|55981609|ref|YP_144906.1| arginine decarboxylase [Thermus thermophilus HB8]
 gi|55773022|dbj|BAD71463.1| arginine decarboxylase [Thermus thermophilus HB8]
          Length = 628

 Score = 54.8 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/302 (12%), Positives = 84/302 (27%), Gaps = 44/302 (14%)

Query: 11  KQKLLNNLDTALYIRKNAGV----KLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYE 62
           + ++ +  +  L      G     + +  +K      + +T+ +       G  + S  E
Sbjct: 71  EARVRDLNEAFLEAMAKYGYQGTYRGVYPVKVNQRRLVLETVARAGRPYHLGLEAGSKPE 130

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK------DKAQKLH 115
           + L        E       +KD +   +      +  N V  L KF         +++L 
Sbjct: 131 LALILAQDLSEEALITTNGFKDDDFVRLALMGRKLGRNVVITLEKFAELFRVLRLSKELG 190

Query: 116 KKIGLRINPSVSYSKFILADPN-RPFSRLGEKCKDKIES--------EIKNVNGLMFHNN 166
            K  L I   +        + +    ++ G    + + +         +  +  L  H  
Sbjct: 191 VKPLLGIRYKLKAKGAGQWEASGGENAKFGLTTPEIVRAVEVLQEEGLLDALVMLHAHIG 250

Query: 167 CE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---------------- 207
            +    +              +       + +++LGGG+                     
Sbjct: 251 SQVTDIRRIKAAVREAAQTYVQLRKLGAPLRYLNLGGGLAVDYDGSKTNFYASANYTLSE 310

Query: 208 -DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE 266
               +    + + E   +    +  E G AI      L   V+D+              E
Sbjct: 311 YAENLVYVTKEVVEAQGEPHPILVTESGRAITAYHEVLVLQVIDVIAPPGEARPSPPPPE 370

Query: 267 AH 268
           AH
Sbjct: 371 AH 372


>gi|261749633|ref|YP_003257319.1| arginine decarboxylase [Blattabacterium sp. (Periplaneta americana)
           str. BPLAN]
 gi|261497726|gb|ACX84176.1| arginine decarboxylase [Blattabacterium sp. (Periplaneta americana)
           str. BPLAN]
          Length = 463

 Score = 54.8 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/300 (13%), Positives = 79/300 (26%), Gaps = 40/300 (13%)

Query: 90  LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD 149
             N   I+ N+                 I +       +  +           +      
Sbjct: 150 FYNTIPILDNSDELEKLSFFIHYPFKLGIRIASEEEPKFEFYTSRLGIGYKDIIVFYLNK 209

Query: 150 KIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFI---TQIEWISLGGGIHFTD 206
              +    +  L F  N   K    +   L      +        +++ +++GGG     
Sbjct: 210 IKNNPKVELKMLHFFINTGIKDTAYYWNELFKCLHIYAKLKKIAPELDILNIGGGFPIKT 269

Query: 207 KD---YPVKDFCQRLKEFSEKYSV-------QIYLEPGEAIVTNTTTLNTTVLD--ISEN 254
                Y  +     +    +K+          IY E G   V  +  +   +L      +
Sbjct: 270 SMSFKYDYEYMTNEIVYQIKKFCQEENISEPHIYTEFGAYTVGESGGIIYRILSQKRQND 329

Query: 255 IKNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGD--------- 301
            +   ++DSS    +PD           A    N       + G +C + D         
Sbjct: 330 REKWNMIDSSFMTTLPDTWAISRRFIMMAINRWNDSYERVFLGGLTCDSDDYYNSEQHMN 389

Query: 302 --IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDGTIKAI 354
                 F    P+ IG    F +   Y     + + G     I  P   + + D   K +
Sbjct: 390 AIYLPRFRENPPLYIG----FFNTGAYQDTI-SGYGGVHHCLIPQPIHILIDHDDQKKLV 444


>gi|302768036|ref|XP_002967438.1| hypothetical protein SELMODRAFT_144682 [Selaginella moellendorffii]
 gi|300165429|gb|EFJ32037.1| hypothetical protein SELMODRAFT_144682 [Selaginella moellendorffii]
          Length = 573

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/297 (11%), Positives = 77/297 (25%), Gaps = 47/297 (15%)

Query: 25  RKNAGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK--FGGETHAYN 78
                 + +  +KC     + + + ++ D    G  + S  E+++   K     +     
Sbjct: 40  FSTRHFQGVFPIKCNHDRYLLEDIVKFGDRCKFGLEAGSKPELLIAIAKLRGSKDALLIC 99

Query: 79  VAYKDCEIDAVLSNCD------------TIIFNTVSQLNKFKDKAQKLHKKIGLRINPSV 126
             YK    D      +             I+   + +L       + L  +  + +   +
Sbjct: 100 NGYKAFICDPDRVYIESVLLARQLGVNAIIVLEQMEELEMVIQACRILGVRPMVGVRAKL 159

Query: 127 SYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNVNGLMFHNNCENKSFLCFSA 177
           S         +     + G    + +              +  L FH   +  S      
Sbjct: 160 STKHTGHWGGSSGDKGKFGLTVTEIVRVVYTLRKEGMLDCLQLLHFHIGSQIPSISIIKE 219

Query: 178 MLKNIEKEFGH---FITQIEWISLGGGIHFTDK---------------DYPVKDFCQRLK 219
            ++     F         +++I +GGG+                    +Y        + 
Sbjct: 220 AMREGSHIFCELALMGAPMQYIDVGGGLGIDYDGSKTQSSASTNYSMQNYANDVVAALVD 279

Query: 220 EFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLL 274
               K   Q  +  E G A+ ++ + L   VL   E           +         
Sbjct: 280 ACILKGVAQPVIISESGRALASHHSVLVFDVLSTFERPAADQDPGEYLLHTFEKVYN 336


>gi|167909409|ref|ZP_02496500.1| pyridoxal-dependent decarboxylase family protein [Burkholderia
           pseudomallei 112]
          Length = 185

 Score = 54.4 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 49/172 (28%), Gaps = 18/172 (10%)

Query: 192 QIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251
            +  ++LGGG      D    +  +       K    ++ E G AI  N     T V  +
Sbjct: 15  PVTHLNLGGGFSEKGHDDATFERYRARIAPLAKRYTLVH-EAGRAIFANAGVFVTRVRAV 73

Query: 252 SENIKNLVIVDSSVEAHVP--------------DYLLYQESATIYPNTGPYTAMVCGRSC 297
                 ++ V     +H                  L+   +A  +           G +C
Sbjct: 74  KVWDDRVIAVCDGGMSHNFLLAKTEAVLKTWAAPTLVPAGAADAHRAPNARPITFVGNTC 133

Query: 298 LAGDIFGE-FHFEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPTIAVKNV 347
              D+ G      +  + GD + F     Y+ +   + F     P       
Sbjct: 134 NRADVIGRLERHPRLPQPGDFVVFSQCGAYHHSYTVSGFLSH-KPAQVYIRQ 184


>gi|317012807|gb|ADU83415.1| arginine decarboxylase [Helicobacter pylori Lithuania75]
          Length = 615

 Score = 54.4 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/314 (11%), Positives = 88/314 (28%), Gaps = 48/314 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL---NQYM 52
           P  +     +   + +      +A          K +  LK       +F  +       
Sbjct: 49  PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLN 108

Query: 53  DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106
            G  + S  E+++       +       +KD E+         + +  T+    +++L  
Sbjct: 109 YGLEAGSKSELIIAMSYTNPKAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168

Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155
               A++       +I       S    + A      S+ G    + +E+          
Sbjct: 169 IIAVAKQNDFVACPKIGIRIRLHSAGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228

Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
           ++ + + FH   +                   +        +  +++GGG+      +  
Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288

Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                                + +  ++    I++E G  I  N   L   VL++  +  
Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348

Query: 257 NLVIVDSSVEAHVP 270
           N   +      + P
Sbjct: 349 NEKSLKIKENNNPP 362



 Score = 40.1 bits (92), Expect = 0.51,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%)

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284
           +L   +A+       +  +L I E ++   +++ S    +PDY   +++  + P      
Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474

Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337
               +A +   +C +            F   + I +    ++F  V  Y        N  
Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534

Query: 338 NMPTI--AVKNVDGTIKA 353
             PT    V +  G  + 
Sbjct: 535 THPTEFSVVFDEKGDYEV 552


>gi|255021517|ref|ZP_05293561.1| Biosynthetic arginine decarboxylase [Acidithiobacillus caldus ATCC
           51756]
 gi|209574084|gb|ACI62980.1| arginine decarboxylase SpeA [Acidithiobacillus caldus]
 gi|254969045|gb|EET26563.1| Biosynthetic arginine decarboxylase [Acidithiobacillus caldus ATCC
           51756]
          Length = 629

 Score = 54.4 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/293 (13%), Positives = 89/293 (30%), Gaps = 46/293 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTL---NQYMD 53
           P  L   Q L   + +               A    +  +K      + +++        
Sbjct: 61  PCLLRFPQILAQRVQSLQSAFAAAMAAWNYPAPYTAVYPIKVNQHRRVVESILQAGDGGV 120

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKF 107
           G  + S  E++        +       YKD E   +    +       ++    S+L   
Sbjct: 121 GLEAGSKPELLTVLALSPEKATIVCNGYKDAEYIRLALMGERLGRRVFLVVEKSSELPLI 180

Query: 108 KDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNV 158
              A++L  +  + +     S       +     S+ G    + ++           +N+
Sbjct: 181 LGIARELQVQPRIGVRARLASAGAGKWQNTGGEKSKFGLSSHEILQLLEDLRAADALQNL 240

Query: 159 NGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK-------- 207
             L FH   +    +           + +E  H    I  + +GGG+    +        
Sbjct: 241 QLLHFHLGSQIPNIQHIQGGMRECARLYQELRHQGADIRVVDVGGGLGVDYEGTHSRAYC 300

Query: 208 --DYPVKDFCQRLKEFSEKYSVQIYL-------EPGEAIVTNTTTLNTTVLDI 251
             +Y V D+ Q +     +   + +L       E G A+  +   L + ++D+
Sbjct: 301 SVNYRVSDYAQSVVGILAELCQREHLPYPEIVSESGRALTAHHAVLISNIIDV 353


>gi|127512548|ref|YP_001093745.1| arginine decarboxylase [Shewanella loihica PV-4]
 gi|166220857|sp|A3QDD8|SPEA_SHELP RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|126637843|gb|ABO23486.1| arginine decarboxylase [Shewanella loihica PV-4]
          Length = 637

 Score = 54.4 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 80/311 (25%), Gaps = 55/311 (17%)

Query: 1   MIKT----PYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMF-DT 47
           M+K+    P  +   Q L + +++               +   L+  +K      +  + 
Sbjct: 53  MVKSGVALPVLVRFPQILHHRVNSLCNAFNQAITRYDYQSDYLLVYPIKVNQQQTVVEEI 112

Query: 48  LNQYMD------GTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNT 100
           L   +       G  + S  E+M          +      YKD E   +    + +    
Sbjct: 113 LASQVSKEVPQLGLEAGSKPELMAVLAMAQKASSVIICNGYKDVEYIRLALIGEKLGHQV 172

Query: 101 VSQLNKFKDKAQKLHKKIGLRINPSVS-------YSKFILADPNRPFSRLGEKCKDKIE- 152
              L K  +    L +   L + P +          K          S+ G      +  
Sbjct: 173 YIVLEKLSELKVVLEEAKKLGVTPRLGLRVRLAFQGKGKWQASGGEKSKFGLSAAQVLNV 232

Query: 153 -------SEIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGI 202
                    + ++  L FH   +    +      +       E       ++   +GGG+
Sbjct: 233 INSLKDEDMLDSLQLLHFHLGSQIANIRDIRSGVSEAGRFYCELQKMGANVKCFDVGGGL 292

Query: 203 HFTDK--------------DYPVKDFCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLN 245
                                   +    L +   ++   +     E G  +  +   L 
Sbjct: 293 AVDYDGTRSQSSNSMNYGLTEYANNIVSVLNDMCREHDQPMPRLISESGRYLTAHHAVLI 352

Query: 246 TTVLDISENIK 256
           T V+       
Sbjct: 353 TDVIGTEAYKP 363


>gi|56404221|gb|AAV87173.1| arginine decarboxylase [Phaseolus vulgaris]
          Length = 386

 Score = 54.4 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/327 (13%), Positives = 93/327 (28%), Gaps = 44/327 (13%)

Query: 28  AGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVA 80
           +  + +  +KC     + + + ++      G  + S  E++L          +       
Sbjct: 1   SHYQGVYPVKCNQDRFVVEDIVKFGSPFRFGLEAGSKPELLLAMSCLCKGNPDALLICNG 60

Query: 81  YKDCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFI 132
           +KD E  ++    +       I+     +++   + ++KL  K   GLR      +S   
Sbjct: 61  FKDAEYISLALVANKLALNTVIVLEQEEEVDLIIELSKKLCIKPVIGLRAKLRTKHSGHF 120

Query: 133 LADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKS---FLCFSAMLKN 181
                R  S+ G      +              +  L FH   +  S             
Sbjct: 121 GGYF-RRESKFGLTTAQILRVVKKLDLAGMLDCLQLLHFHIGSQIPSTALLADGVGEAAQ 179

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           I  E       +  I +GGG+          D    +    E+Y+  +            
Sbjct: 180 IYCELVRLGANMRVIDIGGGLGIDYDGSKSCDSDISVGYSLEEYASAVVHAI------QC 233

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGD 301
                +V +     ++   + S     V + +    +     +      +       AGD
Sbjct: 234 VCDRRSVKNPVICSESGRAIVSHQSILVFEAVGTSTTVGGVSSAFSAPYV-------AGD 286

Query: 302 IFGEFHFEKPVKI-GDRISFEDVAGYN 327
           +  ++ F       GD    E    Y 
Sbjct: 287 LSEDYRFLSEAAFGGDY---ESCLAYT 310


>gi|257459504|ref|ZP_05624613.1| arginine decarboxylase [Campylobacter gracilis RM3268]
 gi|257442929|gb|EEV18063.1| arginine decarboxylase [Campylobacter gracilis RM3268]
          Length = 612

 Score = 54.4 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 50/290 (17%), Positives = 88/290 (30%), Gaps = 45/290 (15%)

Query: 11  KQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQ----YMDGTTSSSLYE 62
           K++++          K  G K     +  LK     G    L      Y  G  + S  E
Sbjct: 56  KKQIVEIYSNFNRAIKEFGYKGKFHAVYPLKVNQFPGFVRNLVDIGEPYGYGLEAGSKPE 115

Query: 63  VMLGHEKFGGETHAYNVAYKDC------EIDAVLSNCDTIIFNTVSQLNKFKDKA---QK 113
           ++L               +KD        I A + +  T+    +++L    + A     
Sbjct: 116 LLLAMAYNKYGAPITVNGFKDKELINIGFIAAEMGHNVTLTIEGLNELETIIETAKERFA 175

Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNVNGLMFHN 165
               IGLRI    S S  + A      S+ G    + IE+         I+    + FH 
Sbjct: 176 PKPFIGLRIRLHNSGSG-LWAKSGGINSKFGLTSTELIEAINLLKKNDLIEQFTMIHFHI 234

Query: 166 NCENKSFLCFS---AMLKNIEKEFGHFI-TQIEWISLGGGIHFTDKD------------- 208
             +               NI  E        ++ I+LGGG+                   
Sbjct: 235 GSQITEIHPLKKALIEAGNIYTELRKMGAKNLKSINLGGGLAIEYSQAKESSSRNYTLKE 294

Query: 209 --YPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
               V    + + E  ++    I++E G  +  +   L   +L++     
Sbjct: 295 YANDVVFLLKSIAEDKKEAEPDIFIESGRYVAASHAVLVAPILELFTQEY 344


>gi|152990564|ref|YP_001356286.1| arginine decarboxylase [Nitratiruptor sp. SB155-2]
 gi|151422425|dbj|BAF69929.1| arginine decarboxylase [Nitratiruptor sp. SB155-2]
          Length = 612

 Score = 54.4 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/290 (13%), Positives = 77/290 (26%), Gaps = 45/290 (15%)

Query: 11  KQKLLNNLDTALYIRKNAGVK----LLLALKCFAAW----GMFDTLNQYMDGTTSSSLYE 62
           K+++ N              K     +  LK          + +   +Y  G  + S  E
Sbjct: 56  KKQIDNLFKEFQKSIDQFNYKGNFNAVFPLKVNQFPNFVSSLVEIAKEYNYGLEAGSKAE 115

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK---------AQK 113
           +++               +KD  +  +      + ++T   +    +           + 
Sbjct: 116 LIIAMAYNNKNAPITVNGFKDKGMITLGFLAAKMGYDTTLTIEGLGELENIIEAAKEYKD 175

Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHN 165
               IGLRI    S    I A      S+ G    + +E+          +    + FH 
Sbjct: 176 PIPNIGLRIRLHSSGIG-IWAKSGGINSKFGLTATELLEAMELLKRNDLLEKFTMIHFHI 234

Query: 166 NCENKSFLCFSAMLKNIEKEFGHFIT----QIEWISLGGGIHFTDKDYPVKDFCQR---- 217
             +          L+     +          +  I+LGGG+      +            
Sbjct: 235 GSQIGEINPVKKALREAGNIYAELKKMGAMNLRNINLGGGLAVEYSQHENVHQRNYTLTE 294

Query: 218 -----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                      + +        I+ E G  I  +   L   VL++     
Sbjct: 295 FTNDVVFLLKEIAQQKGVEEPNIFTESGRFIAASHAVLIAPVLELFSQEY 344


>gi|218296254|ref|ZP_03497010.1| arginine decarboxylase [Thermus aquaticus Y51MC23]
 gi|218243326|gb|EED09856.1| arginine decarboxylase [Thermus aquaticus Y51MC23]
          Length = 630

 Score = 54.4 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/295 (12%), Positives = 82/295 (27%), Gaps = 48/295 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52
           P  L   Q L   +         A        G + +  +K      + +T+ +      
Sbjct: 63  PLVLRFPQILEARVRELNEAFLRAMEKYAYRGGYRGVYPVKVNQRRLVLETVARAGRPYH 122

Query: 53  DGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK--- 108
            G  + S  E+ L        E       +KD +   +      +  N V  L KF    
Sbjct: 123 YGLEAGSKPELALILAQDLSKEALITTNGFKDDDFIRLALMGKKLGRNVVITLEKFAELP 182

Query: 109 ---DKAQKLHKKIGLRINPSVSYSKFILADPN-RPFSRLGEKCKDKIES--------EIK 156
                ++++  +  L I   +        + +    ++ G    + +++         + 
Sbjct: 183 RVLRLSREVGVRPSLGIRYKLKAKGAGQWEASGGENAKFGLTTPEIVKAVEILKEEGLLD 242

Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------ 207
            +  L  H   +    +              +       + +++LGGG+           
Sbjct: 243 TLVMLHAHIGSQVTDIRRIKAAVREAAQTYVQLRKLSAPLRYLNLGGGLAVDYDGSKTNF 302

Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251
                         +    + + E   +    +  E G A+      L   V+D+
Sbjct: 303 YASANYTLQEYAEDLVYVTKEVVEAHGEPHPILVTESGRAVTAYHEVLVLEVIDV 357


>gi|307637695|gb|ADN80145.1| Arginine decarboxylase [Helicobacter pylori 908]
 gi|325996297|gb|ADZ51702.1| Arginine decarboxylase [Helicobacter pylori 2018]
 gi|325997886|gb|ADZ50094.1| Arginine decarboxylase [Helicobacter pylori 2017]
          Length = 615

 Score = 54.4 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/314 (11%), Positives = 86/314 (27%), Gaps = 48/314 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL---NQYM 52
           P  +     +   + +      +A          K +  LK       +   +       
Sbjct: 49  PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVLPLVQGAKGLN 108

Query: 53  DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106
            G  + S  E+++               +KD E+         + +  T+    +++L  
Sbjct: 109 YGLEAGSKSELIIAMSYTNPTAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168

Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155
               A++       +I       S    + A      S+ G    + +E+          
Sbjct: 169 IIAVAKQNDFVACPKIGIRIRLHSAGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228

Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
           ++ + + FH   +                   +        +  +++GGG+      +  
Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288

Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                                + +  ++    I++E G  I  N   L   VL++  +  
Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348

Query: 257 NLVIVDSSVEAHVP 270
           N   +      + P
Sbjct: 349 NEKSLKIKENNNPP 362



 Score = 40.1 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%)

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284
           +L   +A+       +  +L I E ++   +++ S    +PDY   +++  + P      
Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474

Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337
               +A +   +C +            F   + I +    ++F  V  Y        N  
Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534

Query: 338 NMPTI--AVKNVDGTIKA 353
             PT    V +  G  + 
Sbjct: 535 THPTEFSVVFDEKGDYEV 552


>gi|159901027|ref|YP_001547274.1| Orn/DAP/Arg decarboxylase 2 [Herpetosiphon aurantiacus ATCC 23779]
 gi|159894066|gb|ABX07146.1| Orn/DAP/Arg decarboxylase 2 [Herpetosiphon aurantiacus ATCC 23779]
          Length = 576

 Score = 54.0 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 47/392 (11%), Positives = 98/392 (25%), Gaps = 45/392 (11%)

Query: 20  TALYIRKNAGVKLL-LALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG----HEKFGGET 74
            A       G  L   A K   +  +  T         +S+  +V++      +    E 
Sbjct: 132 AAQAASSYTGSFLYAYATKANFSEEVVRTALNAGAHYETSAAADVVIAHHLWRQGVLSED 191

Query: 75  --HAYNVAYKDCE---IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY- 128
                N + +      I A+       +   +  L++           +   +    +  
Sbjct: 192 RYIFCNGSKEPMYLDGILALRQAGYERVVAVLDDLDELDYILAHCRVPMLFGVRERHAPD 251

Query: 129 ---SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKE 185
                   A+         +    ++      +         + +    + A L      
Sbjct: 252 VVDRNHAGAERFGLTPAEMQLVAQRLAGTQHQLVVYHAMVGSQIEDAAAWEARLARSANA 311

Query: 186 FGHFI---TQIEWISLGGGIH---------FTDKDYPVKDFCQRLKEFSEK--YSVQIYL 231
           +         +   + GGG+          F    +            +E    +  I  
Sbjct: 312 YAALASTTPSLTMFNFGGGMPTSGYDLAFQFDYVGFLTNLMANTQAICAEHGVAAPMIIA 371

Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV--PDYLLYQESATIYPNTGPYT 289
           E G   V N       V  + E          +    V  PD L+  +   + P  G  T
Sbjct: 372 ECGRYTVANHNLYLIEVGRVKEAGAIEPWYLLNGSLMVSAPDTLIVDQEFVVVPLDGWDT 431

Query: 290 ----AMVCGR-SCLAGDIFGE----FHFEKPVKIGDRISFEDVAGYNINR-----KNWFN 335
                 + GR +C + D++             + G  ++   V  Y              
Sbjct: 432 AVQAVRLGGRRTCDSDDLYPRSHRPALMLPEFQAGMVLAVCGVGAYQ-AMIGGKGGAHHC 490

Query: 336 GINMPTIAVKNVDGTIKAIREFSYNDYYNNLS 367
                   +   DG    +RE +  +    +S
Sbjct: 491 LNPEMRRIIIEQDGDQLVMREIAPQNLMAQMS 522


>gi|208434905|ref|YP_002266571.1| arginine decarboxylase [Helicobacter pylori G27]
 gi|208432834|gb|ACI27705.1| arginine decarboxylase [Helicobacter pylori G27]
          Length = 615

 Score = 54.0 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/314 (11%), Positives = 90/314 (28%), Gaps = 48/314 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL--NQYMD 53
           P  +     +   + +       A          K +  LK       +F  +   + +D
Sbjct: 49  PLLVRFPHLVQKQIKSLFDAFSLAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLD 108

Query: 54  -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106
            G  + S  E+++       +       +KD E+         + +  T+    +++L  
Sbjct: 109 YGLEAGSKSELIIAMSYTNPKAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168

Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155
               A++       +I       S    + A      S+ G    + +E+          
Sbjct: 169 IIAVAKQNDFVACPKIGIRIRLHSAGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228

Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
           ++ + + FH   +                   +        +  +++GGG+      +  
Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288

Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                                + +  ++    I++E G  I  N   L   VL++  +  
Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348

Query: 257 NLVIVDSSVEAHVP 270
           N   +      + P
Sbjct: 349 NEKSLKIKESNNPP 362



 Score = 40.1 bits (92), Expect = 0.52,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%)

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284
           +L   +A+       +  +L I E ++   +++ S    +PDY   +++  + P      
Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474

Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337
               +A +   +C +            F   + I +    ++F  V  Y        N  
Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534

Query: 338 NMPTI--AVKNVDGTIKA 353
             PT    V +  G  + 
Sbjct: 535 THPTEFSVVFDEKGDYEV 552


>gi|315586925|gb|ADU41306.1| arginine 2-monooxygenase [Helicobacter pylori 35A]
          Length = 615

 Score = 54.0 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/314 (11%), Positives = 90/314 (28%), Gaps = 48/314 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL--NQYMD 53
           P  +     +   + +      +A          K +  LK       +F  +   + +D
Sbjct: 49  PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLD 108

Query: 54  -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106
            G  + S  E+++               +KD E+         + +  T+    +++L  
Sbjct: 109 YGLEAGSKSELIIAMSYTNPTAPVTVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168

Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155
               A++       +I       S    + A      S+ G    + +E+          
Sbjct: 169 IIAVAKQNEFLACPKIGIRIRLHSTGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228

Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
           ++ + + FH   +                   +        +  +++GGG+      +  
Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288

Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                                + +  ++    I++E G  I  N   L   VL++  +  
Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348

Query: 257 NLVIVDSSVEAHVP 270
           N   +      + P
Sbjct: 349 NEKSLKIKENNNPP 362



 Score = 40.1 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%)

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284
           +L   +A+       +  +L I E ++   +++ S    +PDY   +++  + P      
Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474

Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337
               +A +   +C +            F   + I +    ++F  V  Y        N  
Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534

Query: 338 NMPTI--AVKNVDGTIKA 353
             PT    V +  G  + 
Sbjct: 535 THPTEFSVVFDEKGDYEV 552


>gi|15645050|ref|NP_207220.1| arginine decarboxylase [Helicobacter pylori 26695]
 gi|2313524|gb|AAD07486.1| arginine decarboxylase (speA) [Helicobacter pylori 26695]
          Length = 615

 Score = 54.0 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/314 (11%), Positives = 88/314 (28%), Gaps = 48/314 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL---NQYM 52
           P  +     +   + +      +A          K +  LK       +F  +       
Sbjct: 49  PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLN 108

Query: 53  DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106
            G  + S  E+++       +       +KD E+         + +  T+    +++L  
Sbjct: 109 YGLEAGSKSELIIAMSYTNPKAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168

Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155
               A++       +I       S    + A      S+ G    + +E+          
Sbjct: 169 IIAVAKQNEFLACPKIGIRIRLHSTGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228

Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
           ++ + + FH   +                   +        +  +++GGG+      +  
Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288

Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                                + +  ++    I++E G  I  N   L   VL++  +  
Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348

Query: 257 NLVIVDSSVEAHVP 270
           N   +      + P
Sbjct: 349 NEKSLKIKENNNPP 362



 Score = 40.1 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%)

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284
           +L   +A+       +  +L I E ++   +++ S    +PDY   +++  + P      
Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474

Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337
               +A +   +C +            F   + I +    ++F  V  Y        N  
Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534

Query: 338 NMPTI--AVKNVDGTIKA 353
             PT    V +  G  + 
Sbjct: 535 THPTEFSVVFDEKGDYEV 552


>gi|295136029|ref|YP_003586705.1| arginine decarboxylase [Zunongwangia profunda SM-A87]
 gi|294984044|gb|ADF54509.1| arginine decarboxylase [Zunongwangia profunda SM-A87]
          Length = 464

 Score = 54.0 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 53/399 (13%), Positives = 112/399 (28%), Gaps = 65/399 (16%)

Query: 13  KLLNNLDT----ALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYMDGTTSSSLY--- 61
           K+ +N++          KN   K         K      + +   +      +SS +   
Sbjct: 52  KISDNINRAKGWFKAAMKNLDYKGTYNYCYCTKSSHFQYVMNEALKNDIHIETSSAFDIN 111

Query: 62  --EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
             E +    K   + +     +K  +  A       I     + +    +  +    +  
Sbjct: 112 IVEKLKASGKLKDDAYVICNGFKRDQYVAN--IGRLINNGHKNCIPIIDNYEELSLLEDR 169

Query: 120 LR--INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCEN 169
           +       +  +           SRLG   K+ +    +        N+  L F  N   
Sbjct: 170 INDDFEVGIRIASEEEPKFEFYTSRLGIGYKNIVPFYNQSIKDNDKVNLKMLHFFINTGI 229

Query: 170 KSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIH----------FTDKDYPVKDFCQ 216
           +    +   L                ++ +++GGG            +      + +  Q
Sbjct: 230 RDTAYYWNELNKCLKVYINLKRICPTLDSLNIGGGFPIKNSLAFDYDYQYMVEEIINQIQ 289

Query: 217 RLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLL 274
              + ++     ++ E G   V  +      +L   +        +++SS    +PD   
Sbjct: 290 LACKEADVEVPNLFTEFGSFTVGESGGAIYEILYQKQQNDREKWNMINSSFITTLPDTWA 349

Query: 275 YQES----ATIYPNTGPYTAMVCGRSCLAGDI-----------FGEFHFEKPVKIGDRIS 319
             +     A    N      ++ G +C + D              +F  +KP+ IG    
Sbjct: 350 ISKKFVMLAINRWNDEYERVLLGGLTCDSDDYYNSEQNTNAIYLPKFKKDKPLYIG---- 405

Query: 320 FEDVAGYNINRKNWFNG-----INMPTIAVKNVDGTIKA 353
           F +   Y       F G     I  P   + + D   K 
Sbjct: 406 FFNTGAYQQTIG-GFGGLQHCLIPQPKHVLIDKDENGKI 443


>gi|317180168|dbj|BAJ57954.1| arginine decarboxylase [Helicobacter pylori F32]
          Length = 615

 Score = 54.0 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/314 (11%), Positives = 90/314 (28%), Gaps = 48/314 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL--NQYMD 53
           P  +     +   + +      +A          K +  LK       +F  +   + +D
Sbjct: 49  PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLD 108

Query: 54  -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106
            G  + S  E+++               +KD E+         + +  T+    +++L  
Sbjct: 109 YGLEAGSKSELIIAMSYTNPTAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168

Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155
               A++       +I       S    + A      S+ G    + +E+          
Sbjct: 169 IIAVAKQNEFLACPKIGIRIRLHSTGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228

Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
           ++ + + FH   +                   +        +  +++GGG+      +  
Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288

Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                                + +  ++    I++E G  I  N   L   VL++  +  
Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348

Query: 257 NLVIVDSSVEAHVP 270
           N   +      + P
Sbjct: 349 NEKSLKIKENNNPP 362



 Score = 40.1 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%)

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284
           +L   +A+       +  +L I E ++   +++ S    +PDY   +++  + P      
Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474

Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337
               +A +   +C +            F   + I +    ++F  V  Y        N  
Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534

Query: 338 NMPTI--AVKNVDGTIKA 353
             PT    V +  G  + 
Sbjct: 535 THPTEFSVVFDGKGDYEV 552


>gi|315929199|gb|EFV08421.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein
           [Campylobacter jejuni subsp. jejuni 305]
          Length = 311

 Score = 54.0 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 70/227 (30%), Gaps = 30/227 (13%)

Query: 12  QKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEV 63
           +++ N        RK  G K     +  LK     G    L +       G  + S  E+
Sbjct: 56  KQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAEL 115

Query: 64  MLGHEKFGGETHAYNVAYKDC------EIDAVLSNCDTIIFNTVSQLNKFKDKA---QKL 114
           +L               +KD        I A + +  T+    +++L    D A    K 
Sbjct: 116 LLAMAYNNEGAPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKP 175

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNN 166
              IGLR+    S    I A      S+ G    + IE+          +    + FH  
Sbjct: 176 KPNIGLRVRL-HSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLG 234

Query: 167 CENKSFLCFSAMLKN---IEKEFGHFI-TQIEWISLGGGIHFTDKDY 209
            +          L     I  E        ++ I+LGGG+      +
Sbjct: 235 SQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQF 281


>gi|298242855|ref|ZP_06966662.1| alanine racemase domain protein [Ktedonobacter racemifer DSM 44963]
 gi|297555909|gb|EFH89773.1| alanine racemase domain protein [Ktedonobacter racemifer DSM 44963]
          Length = 370

 Score = 54.0 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/209 (12%), Positives = 55/209 (26%), Gaps = 11/209 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           + TP  L+D  +L  N+         A V+L   +K      +     Q    G T++ L
Sbjct: 11  VDTPALLVDLARLEKNIRRYADSAAKARVRLRPHIKTHKTLEIAKMQLQAGAGGITAAKL 70

Query: 61  YEVMLGHEKFGGETHA-----YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E      + G E                           +   +   + +  + A ++ 
Sbjct: 71  GEAE-VFAEAGIEDIFVAYPIIGPEKALRAARLAQHCRLIVGVESEKGVQQLSEAASQIG 129

Query: 116 KKIGLRINPSVS-YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174
             + +R+          +  +      R            I    G  F         + 
Sbjct: 130 STLLVRVEIDSGLGRTGVGQEAAGKLCRQVLDAPGLSLDGIFTFRGASFPEASSRDPQIL 189

Query: 175 FSAMLKNI---EKEFGHFITQIEWISLGG 200
                + +    +        I+ IS+G 
Sbjct: 190 GRLEGEMMVAIAERLRRAGIPIQEISVGS 218


>gi|317009644|gb|ADU80224.1| arginine decarboxylase [Helicobacter pylori India7]
          Length = 615

 Score = 54.0 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/314 (11%), Positives = 90/314 (28%), Gaps = 48/314 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL--NQYMD 53
           P  +     +   + +      +A          K +  LK       +F  +   + +D
Sbjct: 49  PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLD 108

Query: 54  -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106
            G  + S  E+++               +KD E+         + +  T+    +++L  
Sbjct: 109 YGLEAGSKSELIIAMSYTNPTAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168

Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155
               A++       +I       S    + A      S+ G    + +E+          
Sbjct: 169 IIAVAKQNEFLACPKIGIRIRLHSTGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228

Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
           ++ + + FH   +                   +        +  +++GGG+      +  
Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288

Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                                + +  ++    I++E G  I  N   L   VL++  +  
Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348

Query: 257 NLVIVDSSVEAHVP 270
           N   +      + P
Sbjct: 349 NEKSLKIKENNNPP 362



 Score = 40.1 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%)

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284
           +L   +A+       +  +L I E ++   +++ S    +PDY   +++  + P      
Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474

Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337
               +A +   +C +            F   + I +    ++F  V  Y        N  
Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534

Query: 338 NMPTI--AVKNVDGTIKA 353
             PT    V +  G  + 
Sbjct: 535 THPTEFSVVFDEKGDYEV 552


>gi|207092618|ref|ZP_03240405.1| arginine decarboxylase [Helicobacter pylori HPKX_438_AG0C1]
          Length = 593

 Score = 54.0 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 87/301 (28%), Gaps = 48/301 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL--NQYMD 53
           P  +     +   + +       A          K +  LK       +F  +   + +D
Sbjct: 27  PLLVRFPHLVQKQIKSLFDAFSLAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLD 86

Query: 54  -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106
            G  + S  E+++       +       +KD E+         + +  T+    +++L  
Sbjct: 87  YGLEAGSKSELIIAMSYTNPKAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 146

Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155
               A++       +I       S    + A      S+ G    + +E+          
Sbjct: 147 IIAVAKQNDFVACPKIGIRIRLHSTGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 206

Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
           ++ + + FH   +                   +        +  +++GGG+      +  
Sbjct: 207 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 266

Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                                + +  ++    I++E G  I  N   L   VL++  +  
Sbjct: 267 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 326

Query: 257 N 257
           N
Sbjct: 327 N 327



 Score = 40.1 bits (92), Expect = 0.48,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%)

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284
           +L   +A+       +  +L I E ++   +++ S    +PDY   +++  + P      
Sbjct: 393 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 452

Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337
               +A +   +C +            F   + I +    ++F  V  Y        N  
Sbjct: 453 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 512

Query: 338 NMPTI--AVKNVDGTIKA 353
             PT    V +  G  + 
Sbjct: 513 THPTEFSVVFDEKGDYEV 530


>gi|300776464|ref|ZP_07086322.1| arginine decarboxylase [Chryseobacterium gleum ATCC 35910]
 gi|300501974|gb|EFK33114.1| arginine decarboxylase [Chryseobacterium gleum ATCC 35910]
          Length = 464

 Score = 54.0 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 57/426 (13%), Positives = 116/426 (27%), Gaps = 68/426 (15%)

Query: 3   KTPYYLIDKQKLLNNLDT----ALYIRKNA----GVKLLLALKCFAAWGMFDTLNQYMDG 54
            TP  +    ++  N+           +              K      + +   +    
Sbjct: 42  GTPLKISYLPRISQNIQKAKGWFKEAFEKTEYKKNYTYCYCTKSSHFNFVLEEALKNDIS 101

Query: 55  TTSSSLYEVMLGHE-----KFGGETHAYNVAYKDCEIDAVLSNCD-------TIIFNTVS 102
             +SS Y++ +        K           +K  +  A +S+         T I +   
Sbjct: 102 IETSSAYDMDIVKSLYEKGKVDKNIEVICNGFKTDDYLAKISDMINSGFENITPILDNYR 161

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN--VNG 160
           +L+K  + +      IG+RI                   +       +  +E  N  +  
Sbjct: 162 ELDKLTE-SIDSTFDIGIRIASEEEPKFEFYTSRLGIGYKDIIPYYSQKIAEHPNARLKM 220

Query: 161 LMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFT---DKDYPVKDF 214
           L F  N   K    +   L    + +        +++ +++GGG       + DY  +  
Sbjct: 221 LHFFINTGIKDTAYYWNELYKCLRVYARLKKIAPEVDSLNIGGGFPIKTSLNFDYDYQYM 280

Query: 215 CQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSV 265
            + +    +K+          IY E G   V  +      ++      + +   ++DSS 
Sbjct: 281 VEEIVSQIKKFCEEEGVEEPNIYTEFGSFTVGESGANLYKIISQKRQNDREKWNMIDSSF 340

Query: 266 EAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIF-----GEFHFEK------ 310
              +PD                        + G +C + D +         +        
Sbjct: 341 MTTLPDTWAISRHFIMLPLNRWEDTYERVFLGGLTCDSDDYYNSEQHTNAIYLPVFSDTK 400

Query: 311 PVKIGDRISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDG----TIKAIRE-FSYN 360
           P+ IG    F     Y       + G     +  P   +   D       +  RE     
Sbjct: 401 PLYIG----FFHTGAYQETIG-GYGGVHHCLMPQPRHVLIQKDENGELQYEIFREKQEPE 455

Query: 361 DYYNNL 366
           D    L
Sbjct: 456 DVLKLL 461


>gi|332673834|gb|AEE70651.1| arginine 2-monooxygenase [Helicobacter pylori 83]
          Length = 615

 Score = 53.6 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 88/301 (29%), Gaps = 48/301 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL--NQYMD 53
           P  +     +   + +      +A          K +  LK       +F  +   + +D
Sbjct: 49  PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLD 108

Query: 54  -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106
            G  + S  E+++       +       +KD E+         + +  T+    +++L  
Sbjct: 109 YGLEAGSKSELIIAMSYTNPKAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168

Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155
               A++       +I       S    + A      S+ G    + +E+          
Sbjct: 169 IIAVAKQNEFLACPKIGIRIRLHSTGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228

Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
           ++ + + FH   +                   +        +  +++GGG+      +  
Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288

Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                                + +  ++    I++E G  I  N   L   VL++  +  
Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348

Query: 257 N 257
           N
Sbjct: 349 N 349



 Score = 40.1 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%)

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284
           +L   +A+       +  +L I E ++   +++ S    +PDY   +++  + P      
Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474

Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337
               +A +   +C +            F   + I +    ++F  V  Y        N  
Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534

Query: 338 NMPTI--AVKNVDGTIKA 353
             PT    V +  G  + 
Sbjct: 535 THPTEFSVVFDGKGDYEV 552


>gi|307293936|ref|ZP_07573780.1| Orn/DAP/Arg decarboxylase 2 [Sphingobium chlorophenolicum L-1]
 gi|306880087|gb|EFN11304.1| Orn/DAP/Arg decarboxylase 2 [Sphingobium chlorophenolicum L-1]
          Length = 156

 Score = 53.6 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/129 (12%), Positives = 29/129 (22%), Gaps = 14/129 (10%)

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIY--PNTGP 287
            E G  +          +LD+         +      H             +    +  P
Sbjct: 9   FECGRILTAYHAAYVCEILDLKFVHGRTFALLRGGTHHFRLPSSWGHNHPFLILPRDAWP 68

Query: 288 YTAM----------VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNW-FNG 336
           +             + G  C   D+       +  +IGD   F     Y  +  +  F  
Sbjct: 69  HPWPRPECRDINLTLAGELCTPKDVLARNVPVERARIGDLACFLMAGAYGWDISHHDFLC 128

Query: 337 INMPTIAVK 345
              P     
Sbjct: 129 HPHPQHVYL 137


>gi|15612027|ref|NP_223679.1| arginine decarboxylase [Helicobacter pylori J99]
 gi|4155545|gb|AAD06541.1| arginine decarboxylase [Helicobacter pylori J99]
          Length = 615

 Score = 53.6 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/314 (11%), Positives = 85/314 (27%), Gaps = 48/314 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL---NQYM 52
           P  +     +   + +       A          K +  LK       +   +       
Sbjct: 49  PLLVRFPHLVQKQIKSLFDAFSLAIKEYQYSGAFKAVFPLKVNQMPSFVLPLVQGAKGLN 108

Query: 53  DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106
            G  + S  E+++               +KD E+         + +  T+    +++L  
Sbjct: 109 YGLEAGSKSELIIAMSYTNPTAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168

Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155
               A++       +I       S    + A      S+ G    + +E+          
Sbjct: 169 IIAVAKQNDFVACPKIGIRIRLHSAGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228

Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
           ++ + + FH   +                   +        +  +++GGG+      +  
Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288

Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                                + +  ++    I++E G  I  N   L   VL++  +  
Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348

Query: 257 NLVIVDSSVEAHVP 270
           N   +      + P
Sbjct: 349 NEKSLKIKENNNPP 362



 Score = 39.4 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%)

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284
           +L   +A+       +  +L I E ++   +++ S    +PDY   +++  + P      
Sbjct: 415 HLIVKKAVQLFYVKDHNDILRIQEQVQERYLLNWSFFQSLPDYWGLRQNFPVMPLNKLDE 474

Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337
               +A +   +C +            F   + I +    ++F  V  Y        N  
Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534

Query: 338 NMPTI--AVKNVDGTIKA 353
             PT    V +  G  + 
Sbjct: 535 THPTEFSVVFDEKGDYEV 552


>gi|254779590|ref|YP_003057696.1| arginine decarboxylase [Helicobacter pylori B38]
 gi|254001502|emb|CAX29520.1| Biosynthetic arginine decarboxylase(ADC) [Helicobacter pylori B38]
          Length = 615

 Score = 53.6 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/314 (11%), Positives = 90/314 (28%), Gaps = 48/314 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL--NQYMD 53
           P  +     +   + +      +A          K +  LK       +F  +   + +D
Sbjct: 49  PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLD 108

Query: 54  -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106
            G  + S  E+++       +       +KD E+         + +  T+    +++L  
Sbjct: 109 YGLEAGSKSELIIAMSYTNPKAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168

Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155
                ++       +I       S    + A      S+ G    + +E+          
Sbjct: 169 IIAVTKQNDFVACPKIGIRIRLHSAGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228

Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
           ++ + + FH   +                   +        +  +++GGG+      +  
Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288

Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                                + +  ++    I++E G  I  N   L   VL++  +  
Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348

Query: 257 NLVIVDSSVEAHVP 270
           N   +      + P
Sbjct: 349 NEKSLKIKENNNPP 362



 Score = 40.1 bits (92), Expect = 0.51,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%)

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284
           +L   +A+       +  +L I E ++   +++ S    +PDY   +++  + P      
Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474

Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337
               +A +   +C +            F   + I +    ++F  V  Y        N  
Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534

Query: 338 NMPTI--AVKNVDGTIKA 353
             PT    V +  G  + 
Sbjct: 535 THPTEFSVVFDEKGDYEV 552


>gi|150025756|ref|YP_001296582.1| arginine decarboxylase [Flavobacterium psychrophilum JIP02/86]
 gi|149772297|emb|CAL43775.1| Arginine decarboxylase [Flavobacterium psychrophilum JIP02/86]
          Length = 464

 Score = 53.6 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 49/408 (12%), Positives = 109/408 (26%), Gaps = 63/408 (15%)

Query: 3   KTPY-YLIDKQKLLNNLDT----ALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYMD 53
            TP  +     ++ +N+           +    +         K      + +   +   
Sbjct: 42  GTPLKFTY-LPQISSNIKRAKAWFRNAMEKNNYEGKYYYCYCTKSSHFEYIMNEAFKNNI 100

Query: 54  GTTSSSLYEVMLG---HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK 110
              +SS +++ +     +        Y +         + +    I     + +    + 
Sbjct: 101 HIETSSAFDIDIVENLLQNGKINKSTYVICNGFKRDQYIENIARIINNGHKNTIPIIDNY 160

Query: 111 A--------QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKC--KDKIESEIKNVNG 160
                     K   KIG+RI                   +   +   K   E++   +  
Sbjct: 161 EELDLLQAEIKGKFKIGIRIAAEEEPKFEFYTSRLGIGYKNIVQFYRKQIQENDKLELKM 220

Query: 161 LMFHNNCENK---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---DYPVKDF 214
           L F  N        +         +          ++ +++GGG    +    +Y  +  
Sbjct: 221 LHFFINTGINDNAYYWNELVKCIKVYISLKKECPTLDGLNIGGGFPIKNSLTFEYDYQYM 280

Query: 215 CQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSV 265
              +    +            I+ E G   V  +      +L   +        ++DSS 
Sbjct: 281 IDEIINQIKIACEEAEVDVPNIFTEFGSFTVGESGGAIYQILYQKQQNDREKWNMIDSSF 340

Query: 266 EAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGD-----------IFGEFHFEK 310
              +PD     +     A    N      ++ G +C + D              +++ EK
Sbjct: 341 ITTLPDTWAINKRFIMLAINRWNDQYERVLLGGMTCDSDDYYNSEQNMNAIYLPKYNKEK 400

Query: 311 PVKIGDRISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDGTIKA 353
           P+ IG    F +   Y       + G     I  P   + + D     
Sbjct: 401 PLYIG----FFNTGAYQETIG-GYGGLHHCLIPQPKHILIDKDENGII 443


>gi|1620470|emb|CAA65422.1| arginine decarboxylase [Synechocystis sp. PCC 6803]
          Length = 302

 Score = 53.6 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 60/206 (29%), Gaps = 38/206 (18%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVK--------LLLALKCFAAWGMFDTLNQYM---- 52
           P  +     L + L+        A  +         +  +KC     + + L ++     
Sbjct: 79  PLLIRFSDILADRLERLNSCFAKAIARYNYPNTYQAVYPVKCNQQRHLVEALVRFGQTSQ 138

Query: 53  DGTTSSSLYEVMLGHEKFGG---------ETHAYNVAYKDCEIDAVL------SNCDTII 97
            G  + S  E+M+                +       YKD +            +   II
Sbjct: 139 CGLEAGSKPELMIALATLPPPLDRQDKHTKPLIICNGYKDQDYLETALLAKRLGHRPIII 198

Query: 98  FNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKF---ILADPNRPFSRLGEKCKDKIESE 154
              + +L      +Q+L+ K  L +   +S        ++  N   ++LG    D +   
Sbjct: 199 IEQLRELEWVLHISQQLNIKPMLGVRARLSCQSLKSSEISSGNGDRAKLGLTMPDIVTVI 258

Query: 155 IK--------NVNGLMFHNNCENKSF 172
            +         +  L FH   +    
Sbjct: 259 HRLEENNCLDCLKMLHFHLGTQVSDI 284


>gi|332881893|ref|ZP_08449535.1| Pyridoxal-dependent decarboxylase, sheet domain protein
           [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332680128|gb|EGJ53083.1| Pyridoxal-dependent decarboxylase, sheet domain protein
           [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 463

 Score = 53.6 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 50/396 (12%), Positives = 103/396 (26%), Gaps = 59/396 (14%)

Query: 13  KLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           K+  N+  A    + A                K      +     +      +SS +++ 
Sbjct: 52  KISENIQRAKKWFEKAIKKHKYKGEYNYCYCTKSSHFKHVMVEALKNDIHMETSSAFDIN 111

Query: 65  ----LGHEK-FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQK 113
               L  E     E+H     +K                 + I      +     ++  K
Sbjct: 112 IINNLISEGLINKESHILCNGFKRDAYIDGIADLINRGYHNCIPIIDNYEEINLFEEKIK 171

Query: 114 LHKKIGLRINPSVSYSKFILADPNRPF--SRLGEKCKDKIESEIKNVNGLMFHNNCENK- 170
               IG+RI                    + L    ++  ++    +  L F  N   K 
Sbjct: 172 DKYSIGIRIASEEDPRSEFYTSRLGIGYKNILPFYNREIKDNPKVRLKMLHFFINTGIKD 231

Query: 171 --SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---DYPVKDFCQRLKEFSEKY 225
              +         +  +      +++ +++GGG         +Y        +    +  
Sbjct: 232 NAYYWNELLKCLRVYIQLKKVAPELDSLNIGGGFPIKSSLAFEYDYAYMVDEIIRQIKIT 291

Query: 226 S-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLLYQ 276
                     I+ E G   V         ++   +        +++SS    +PD     
Sbjct: 292 CDQEKVPVPNIFTEFGSFTVGEAGGAIYEIMYQKQQNDREKWDMINSSFITTLPDSWAIN 351

Query: 277 ES----ATIYPNTGPYTAMVCGRSCLAGDI-----------FGEFHFEKPVKIGDRISFE 321
           +          N      ++ G +C   D              +++  KP+ IG    F 
Sbjct: 352 KRFVLLPINRWNDEYERVLLGGLTCDGDDYYNSEQNMNAIYLPKYNKNKPLYIG----FF 407

Query: 322 DVAGY----NINRKNWFNGINMPTIAVKNVDGTIKA 353
           +   Y              I  P I + + D   K 
Sbjct: 408 NTGAYQDSIGGVGGLQHCLIPQPKIVLIDKDKDGKI 443


>gi|118474532|ref|YP_892067.1| arginine decarboxylase [Campylobacter fetus subsp. fetus 82-40]
 gi|118413758|gb|ABK82178.1| arginine decarboxylase [Campylobacter fetus subsp. fetus 82-40]
          Length = 613

 Score = 53.6 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 47/290 (16%), Positives = 87/290 (30%), Gaps = 45/290 (15%)

Query: 11  KQKLLNNLDTALYI---RKNAG-VKLLLALKCFAAWGMFDTLNQ----YMDGTTSSSLYE 62
           K++++    +        + +G    +  LK     G  + L +    Y  G  + S  E
Sbjct: 57  KKQIVQVYSSFDRAKKEFEYSGSFNAVYPLKVNQYPGFVENLVKLGESYGYGLEAGSKAE 116

Query: 63  VMLGHEKFGGETHAYNVAYKDC------EIDAVLSNCDTIIFNTVSQLNKFKDKA---QK 113
           ++L               +KD        I A + +  T+    +++L      A     
Sbjct: 117 LLLAMAYNNYGAPITVNGFKDKELIDIGFIAAEMGHNITLTIEGLNELEAIIATAKERFT 176

Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNVNGLMFHN 165
               IGLRI    S    + A      S+ G    + IE+         I+    + FH 
Sbjct: 177 PKPSIGLRIRL-HSSGTGVWAKSGGINSKFGLTSTELIEAVNLLKDNELIEQFTMIHFHI 235

Query: 166 NCENKSFLCFSAMLKNIEKEFGHFIT----QIEWISLGGGIHFTDKDY------------ 209
             +          L      +          ++ I+LGGG+      +            
Sbjct: 236 GSQINEIHPLKKALVEAGNIYAELRKMGASNLKAINLGGGLAIEYSQFKEHPSRNYTLKE 295

Query: 210 ---PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
               V    + +     +    I++E G  I  N   L   VL++     
Sbjct: 296 YANDVVYLLKTIANQKNEIEPDIFIESGRYIAANHAVLVAPVLELFSQEY 345


>gi|228065909|gb|ACP56699.1| arginine decarboxylase [Lithospermum erythrorhizon]
          Length = 708

 Score = 53.6 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 60/196 (30%), Gaps = 32/196 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +     L N L++  +   +A          + +  +KC     + + + Q+     
Sbjct: 102 PMIVRFPDVLKNRLESLQFAFDSAILAQGYGGHYQGVYPVKCNQDRYIVEDIVQFGSSFR 161

Query: 54  -GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
            G  + S  E++L          E+      +KD E  A+            I+     +
Sbjct: 162 FGLEAGSKPELLLAMSCLCKGSPESLLICNGFKDAEYIALACVARKLLLNTVIVLEQEEE 221

Query: 104 LNKFKDKAQK--LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           L+   D ++K  +   IGLR      +S    +       + G      +          
Sbjct: 222 LDLVIDISRKISVIPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTAQILRVVKKLEQAG 280

Query: 156 --KNVNGLMFHNNCEN 169
               +  L FH   + 
Sbjct: 281 MLDCLQLLHFHIGSQI 296


>gi|307246498|ref|ZP_07528570.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306852561|gb|EFM84794.1| Diaminopimelate decarboxylase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
          Length = 131

 Score = 53.2 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 33/105 (31%), Gaps = 5/105 (4%)

Query: 48  LNQYMDGTTSSSLYEVMLGH-EKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQL 104
           + +   G    S  E+              ++   K       A+          ++++L
Sbjct: 1   MARLGSGFDIVSQGELERVLAAGGEPSKVVFSGVAKSHSEIQRALEVGIRCFNIESIAEL 60

Query: 105 NKFKDKAQKLHK--KIGLRINPSVSYSKFILADPNRPFSRLGEKC 147
           ++  + A +L K   I LR+NP V              ++ G   
Sbjct: 61  HRINEVAGQLGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSV 105


>gi|291276448|ref|YP_003516220.1| biosynthetic arginine decarboxylase [Helicobacter mustelae 12198]
 gi|290963642|emb|CBG39474.1| biosynthetic arginine decarboxylase [Helicobacter mustelae 12198]
          Length = 614

 Score = 53.2 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/277 (11%), Positives = 80/277 (28%), Gaps = 39/277 (14%)

Query: 19  DTALYIRKNAGVKLLLALKCFAAWG-MFDTLNQYMD---GTTSSSLYEVMLGHEKFGGET 74
                 +       +  LK       +   +   ++   G  + S  E+++         
Sbjct: 68  KAMREYKYEGHFHAVFPLKVNQMPNFVLPLMKSSLNRSYGLEAGSKSELIIAMAYTNKHA 127

Query: 75  HAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGLRINPSV 126
                 +KD E+       A + +  T+    +++L      A+++              
Sbjct: 128 PITVNGFKDKEMIHLGFIAANMGHSITLTIEGLNELETIIAVAKEMGEPYPDIGLRIRLH 187

Query: 127 SYSKFILADPNRPFSRLGEKCKDKIES--------EIKNVNGLMFHNNCENKSFLCFSAM 178
           S    + A      S+ G    + +E+         +     + FH   +          
Sbjct: 188 STGTGVWAKSGGIHSKFGLTSTELLEAISLLEKSKLLHKFRMIHFHIGSQISDISPLKKA 247

Query: 179 LKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQR---------------LK 219
           ++ +   +         ++  +++GGG+      +   + C                 + 
Sbjct: 248 IREVGNIYAELRKMGAKKLTAVNIGGGLAVEYTQHQGCNNCNYTLSEFSGDVVFSLKEIV 307

Query: 220 EFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
           +  ++    IY+E G  I  N   L   VL++     
Sbjct: 308 KNKKEKEPDIYIESGRYISANHAVLVAPVLELFSQEY 344


>gi|149371929|ref|ZP_01891248.1| arginine decarboxylase, biosynthetic [unidentified eubacterium
           SCB49]
 gi|149355069|gb|EDM43630.1| arginine decarboxylase, biosynthetic [unidentified eubacterium
           SCB49]
          Length = 463

 Score = 53.2 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 49/394 (12%), Positives = 107/394 (27%), Gaps = 61/394 (15%)

Query: 13  KLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY--- 61
           K+  N+  A    +N+                K      +     +      +SS +   
Sbjct: 52  KISENIQRAKQWFENSIKAQNYKGSYNYCYCTKSSHFKHVLHEATKNDIHIETSSAFDIN 111

Query: 62  --EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQ----LNKFKDKAQKLH 115
             E +    K   +T      +K  +    ++                  +    ++ + 
Sbjct: 112 IIENLKAEGKITDKTFVICNGFKREQYITNITRLINDGQENCIPIIDNYEELDLLSEGIK 171

Query: 116 KKIGLRINPSVSYSKFILADPNRPF----SRLGEKCKDKIESEIKNVNGLMFHNNCENK- 170
               + I  +           +R      + +         +E   +  L F  N   + 
Sbjct: 172 GDFKVGIRIASEEEPKFEFYTSRLGIGYKNIVPFYENQIKNNEKVELKMLHFFINTGMRD 231

Query: 171 --SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHF-------TDKDYPVKDFCQRLKEF 221
              +         +          ++ +++GGG           D  Y V +   ++K  
Sbjct: 232 NAYYWNELLKCLKVYTRLKKICPTLDSLNIGGGFPIKNSLAFEYDYQYMVDEIINQIKIT 291

Query: 222 SEK---YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLLYQ 276
            E+       I+ E G   V  +      +L   +        +++SS    +PD     
Sbjct: 292 CEEEGVSVPHIFTEFGSFTVGESGGAIYEILYQKQQNDREKWNMINSSFITTLPDTWAIS 351

Query: 277 ES----ATIYPNTGPYTAMVCGRSCLAGDI-----------FGEFHFEKPVKIGDRISFE 321
           +     A    N      ++ G +C + D               +  E+P+ IG    F 
Sbjct: 352 KRFIMMAINRWNDTYERVLLGGLTCDSDDYYNSEQNMNAIYLPRYKKEQPLYIG----FF 407

Query: 322 DVAGYNINRKNWFNG-----INMPTIAVKNVDGT 350
           +   Y  +    F G     +  P   + + D  
Sbjct: 408 NTGAYQESIG-GFGGLQHCLVPSPKHILIDKDKD 440


>gi|157165425|ref|YP_001466860.1| arginine decarboxylase [Campylobacter concisus 13826]
 gi|112801270|gb|EAT98614.1| arginine decarboxylase [Campylobacter concisus 13826]
          Length = 611

 Score = 53.2 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 51/300 (17%), Positives = 88/300 (29%), Gaps = 49/300 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLL--------ALKCFAAWGMFDTLNQYM---- 52
           P  L     +   ++        A  +            LK     G    L +      
Sbjct: 46  PLLLRFPHLIQKQIEQIHASFAKAKKEFAYKGSFNAVFPLKVNQYPGFVKNLVRLGKPYN 105

Query: 53  DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNK 106
            G  + S  E++L       +       +KD E+       A + +  T+    +++L  
Sbjct: 106 YGLEAGSKAELLLTMAYNNDKAPITVNGFKDKEMINIGFIAAEMGHNITLTIEGLNELEA 165

Query: 107 FKDKA---QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------- 156
               A    K   KIGLRI    S    + A      S+ G    + IE+          
Sbjct: 166 IIAIAKERFKPKPKIGLRIRL-HSTGSGLWAKSGGIHSKFGLTSTELIEAVKMLKKANLL 224

Query: 157 -NVNGLMFHNNCENKSFLCFS---AMLKNIEKEFGHFIT-QIEWISLGGGIHFTDKDY-- 209
            N   + FH   +               NI  E        ++ I+LGGG+      +  
Sbjct: 225 ENFTMIHFHIGSQISEIHPLKKALIEAGNIYAELRKMGATNLKAINLGGGLAIEYSQFKE 284

Query: 210 -------------PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                         V    + + E  ++    I++E G  I  +   L   VL++     
Sbjct: 285 ESSRNYTLNEYANDVVYMLKTISEQKKEIEPDIFIESGRYIAASHALLVAPVLELFSQEY 344


>gi|148906158|gb|ABR16236.1| unknown [Picea sitchensis]
          Length = 479

 Score = 53.2 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/258 (10%), Positives = 74/258 (28%), Gaps = 33/258 (12%)

Query: 12  QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
             +L+ +         A          + +  +KC     +   + ++      G    S
Sbjct: 132 DIVLHRIQKLQECFDMAISRYGYQQSFQGVFPIKCNHDSFLIKDIIEFGHQFKFGLEVGS 191

Query: 60  LYEVMLGHEKF--GGETHAYNVAYKDCEIDAVL------SNCDTIIFNTVSQLNKFKDKA 111
             E+++   K     +       YKD                  ++   + +L+     +
Sbjct: 192 KPELLIAVSKLCCNKDALLICNGYKDSVYIESALLAMQLGIKVVLVLEQMEELDLVIKTS 251

Query: 112 QKLHKKIGLRINPSVSY-SKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLM 162
           +KL     + +   +S       A+ +    + G      I+           + +  L 
Sbjct: 252 RKLKVLPIIGLRAKLSTKHDGHWAETSGDSGKFGLSVSKLIQVVHRLKKENMLQCLQLLH 311

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLK 219
           FH   +  S       ++     +        ++ +I +GGG+               + 
Sbjct: 312 FHIGSQIPSISTMKEAMREGSHIYCELVLMGARMHYIDVGGGLGIDYDGTGDPSNAS-IS 370

Query: 220 EFSEKYSVQIYLEPGEAI 237
              + Y+ ++ +   +A 
Sbjct: 371 YSMQCYANEVVVALRDAC 388


>gi|325286965|ref|YP_004262755.1| Orn/DAP/Arg decarboxylase 2, C-terminal protein [Cellulophaga
           lytica DSM 7489]
 gi|324322419|gb|ADY29884.1| Orn/DAP/Arg decarboxylase 2, C-terminal protein [Cellulophaga
           lytica DSM 7489]
          Length = 467

 Score = 53.2 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 48/408 (11%), Positives = 108/408 (26%), Gaps = 63/408 (15%)

Query: 3   KTPY-YLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD 53
            +P  +     K+ +N+  A      A                K      +         
Sbjct: 42  GSPLKFTY-LPKISDNISRAKNWFAIAMEKYQYKGKYHYCYCTKSSHFKPVLHEALNNNI 100

Query: 54  GTTSSS---LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQ------L 104
              +SS   +  V    ++   +   Y +         + +    I     +        
Sbjct: 101 HIETSSAFDINIVEHLKQEGKIKDDTYVICNGFKRDQYITNIARLINEGHRNCIPIIDNY 160

Query: 105 NKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF----SRLGEKCKDKIESEIKNVNG 160
            +    + ++++   + I  +           +R      + +        +++   +  
Sbjct: 161 EEIDLLSNEINEDFKVGIRIASEEEPKFEFYTSRLGIGYKNIVPFYENQIRDNDKVQLKM 220

Query: 161 LMFHNNCENK---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK---DYPVKDF 214
           L F  N   K    +         +  +       ++ +++GGG    +    DY  +  
Sbjct: 221 LHFFINTGIKDNAYYWNELLKCLKVYVKLKKICPSLDSLNIGGGFPIKNSLVFDYDYQYM 280

Query: 215 CQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSV 265
              +    +            I+ E G   V         +L   +        ++DSS 
Sbjct: 281 IDEIINQIKLTCDEAGVDVPNIFTEFGSFTVGEAGGAIYEILYQKQQNDREKWNMIDSSF 340

Query: 266 EAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGD-----------IFGEFHFEK 310
              +PD     +          N      ++ G +C + D              ++   K
Sbjct: 341 ITTLPDTWAINKRFIMLPINRWNDEYERVLLGGLTCDSDDYYNSEQHTNAIYLPKYKKNK 400

Query: 311 PVKIGDRISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDGTIKA 353
           P+ IG    F +   Y  +    + G     I  P   + N D   K 
Sbjct: 401 PLYIG----FFNTGAYQESIG-GYGGLQHCLIPQPKHILINKDAEGKI 443


>gi|86140070|ref|ZP_01058633.1| arginine decarboxylase [Roseobacter sp. MED193]
 gi|85823165|gb|EAQ43377.1| arginine decarboxylase [Roseobacter sp. MED193]
          Length = 629

 Score = 53.2 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/303 (10%), Positives = 76/303 (25%), Gaps = 44/303 (14%)

Query: 11  KQKLLNNLDTALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYMD----GTTSSSLYE 62
           + ++ +   +     +  G K     +  +K      + D + ++      G  + S  E
Sbjct: 70  ENEIRHINQSFANAIQRVGYKAPYRGVFPIKVNQQAQVIDRIVEFGSKYDFGLEAGSKPE 129

Query: 63  VMLGHEK--FGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           +++              N       I        L     I+  +  +     +  ++L 
Sbjct: 130 LVIALAHRLAKDALIVCNGVKDAEFIRLAILSRRLGFNTIIVLESPKEAETVIEVTRELG 189

Query: 116 KKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNN 166
            +  L +     +       + +   S  G      +              +     H  
Sbjct: 190 IEPLLGVRVKLTNQIGGKWQESSGDRSAFGMNSDQLLRVVDRLKDVGLLHCLRLQHSHLG 249

Query: 167 CENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDY-------------- 209
            +               + F         +  + LGGG+                     
Sbjct: 250 SQVPDVNDVRRATAEACRYFIELTREGVPLTHLDLGGGLGIDYTGEKRAAENSINYSIEE 309

Query: 210 ---PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVE 266
               V +      + +E     +  E G A+V  ++ L   VL+ +             +
Sbjct: 310 YASNVVETVAYAMDDAEVAHPVLVTESGRAVVATSSMLIFDVLETTLYDAPDAPDVQPED 369

Query: 267 AHV 269
            H+
Sbjct: 370 HHL 372


>gi|261251833|ref|ZP_05944407.1| biosynthetic arginine decarboxylase [Vibrio orientalis CIP 102891]
 gi|260938706|gb|EEX94694.1| biosynthetic arginine decarboxylase [Vibrio orientalis CIP 102891]
          Length = 636

 Score = 53.2 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/270 (11%), Positives = 70/270 (25%), Gaps = 35/270 (12%)

Query: 5   PYYLIDKQKLLNN----LDTALYIRKN----AGVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +   Q L               +         L+  +K      + D + +      
Sbjct: 61  PVLVRFPQILHQRVHGICQAFNQAIEEYQYQNNYLLVYPIKVNQQKEVVDEILESQAQLE 120

Query: 54  ----GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
               G  + S  E++  L   +        N       +        L +   I+   +S
Sbjct: 121 TKQLGLEAGSKPELLAVLALAQKASSVIVCNGYKDREYVRLALIGEKLGHKVFIVLEKLS 180

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153
           +L+    +A+ L  K  L I   ++         +     + G      +        E 
Sbjct: 181 ELDLVLKEAKSLGVKPRLGIRIRLASQGAGKWQSSGGEKSKFGLSASQVLTVIERLKQEE 240

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
           ++  +  + FH   +    +              E       I++  +GGG+        
Sbjct: 241 QLDAMQLVHFHLGSQMANIRDIRNGVNESARFYCELREMGADIKYFDIGGGLAVDYDG-T 299

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
                  +     +Y+  I    G+     
Sbjct: 300 RSQSSNSMNYGLIEYARNIVSTVGDVCQQY 329


>gi|124024772|ref|YP_001013888.1| arginine decarboxylase [Prochlorococcus marinus str. NATL1A]
 gi|123959840|gb|ABM74623.1| Orn/DAP/Arg decarboxylases family 2 [Prochlorococcus marinus str.
           NATL1A]
          Length = 647

 Score = 53.2 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 34/294 (11%), Positives = 86/294 (29%), Gaps = 48/294 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52
           P  +     L + L       + A          + +  +KC     + + L    +++ 
Sbjct: 68  PLLIRFDDILEDCLKNLHKAFEKAINDYQYEGKYQGVFPIKCNQQRHVVEELITCGSKWN 127

Query: 53  DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCD------TIIFNTVSQLN 105
            G  + S  E+++G       +       YKD                  ++    + + 
Sbjct: 128 FGLEAGSKPELLIGLSILENPKALLICNGYKDQRYIETAILARQLGRQPIVVIEQANDVE 187

Query: 106 KFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIE--------SEIK 156
                +  L     + I     S S    +      S+ G    + ++        + + 
Sbjct: 188 LIIKSSDLLGASPLIGIRAKLSSQSSGRWSSSIGDKSKFGLSIPEILKTIKRLKEANLLN 247

Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK------ 207
            +  L FH   +          L+   + +         + ++ +GGG+           
Sbjct: 248 ELKLLHFHLGSQINDIGVLKDALQEAGQIYAELINLGAPMGYLDVGGGLGIDYDGSQTAS 307

Query: 208 ----DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLD 250
               +Y ++++   +    ++           +  E G AI ++ + L   +L 
Sbjct: 308 IASTNYSLQNYANDVVATIKECCESKKIPLPTLITESGRAIASHFSILIFNILG 361


>gi|319953364|ref|YP_004164631.1| orn/dap/arg decarboxylase 2, c-terminal protein [Cellulophaga
           algicola DSM 14237]
 gi|319422024|gb|ADV49133.1| Orn/DAP/Arg decarboxylase 2, C-terminal protein [Cellulophaga
           algicola DSM 14237]
          Length = 466

 Score = 53.2 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 46/397 (11%), Positives = 106/397 (26%), Gaps = 61/397 (15%)

Query: 13  KLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           K+  N++ A    K A                K      + + +        +SS Y++ 
Sbjct: 52  KISENINRAKAWFKIAMEKNDYKGKYHYCYCTKSSHFQPVLNEVLNNDVHIETSSAYDIN 111

Query: 65  LGHEKFGGETH---AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK--------AQK 113
           +  +           Y +       + + +    I     + +    +            
Sbjct: 112 IVEKLKKKGKIKDDTYVICNGFKRDEYIDNIGRLINEGHRNCIPIIDNYEEIDLLSDVIG 171

Query: 114 LHKKIGLRINPSVSYSKFILADPNRPF--SRLGEKCKDKIESEIKNVNGLMFHNNCENK- 170
              K+G+RI                    + +        +++   +  L F  N   + 
Sbjct: 172 DTFKVGIRIASEEEPKFEFYTSRLGIGYKNIVPFYENQIKDNDKVELKMLHFFINTGIRD 231

Query: 171 --SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIH----------FTDKDYPVKDFCQRL 218
              +         +          ++ +++GGG            +      + +     
Sbjct: 232 NAYYWNELVKCLKVYIRLKKMCPSLDSLNIGGGFPIKNSLAFDYDYQYMIDEIINQINIA 291

Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLLYQ 276
            + +E     I+ E G   V  +      +L   +        ++DSS    +PD     
Sbjct: 292 CQEAEVPVPHIFTEFGSFTVGESGGAIYEILYQKQQNDREKWNMIDSSFITTLPDTWAIN 351

Query: 277 ES----ATIYPNTGPYTAMVCGRSCLAGD-----------IFGEFHFEKPVKIGDRISFE 321
           +                 ++ G +C + D              ++  +KP+ IG    F 
Sbjct: 352 KRFVMLPINRWQDEYERVLLGGLTCDSDDYYNSEQNMNAIYLPKYRRDKPLFIG----FF 407

Query: 322 DVAGYNINRKNWFNG-----INMPTIAVKNVDGTIKA 353
           +   Y  +    + G     I  P   + + D   K 
Sbjct: 408 NTGAYQESIG-GYGGLQHCLIPQPKHILIDRDENGKL 443


>gi|87311553|ref|ZP_01093671.1| arginine decarboxylase [Blastopirellula marina DSM 3645]
 gi|87285675|gb|EAQ77591.1| arginine decarboxylase [Blastopirellula marina DSM 3645]
          Length = 637

 Score = 53.2 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 41/334 (12%), Positives = 90/334 (26%), Gaps = 47/334 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTL----NQYM 52
           P  +     L   L     +                +  +K      + + +     Q+ 
Sbjct: 65  PILIRFSGILETRLQEIRDVFDVAIREYGYQNKYACVYPIKVNQQRQVVEEVLQYGRQHG 124

Query: 53  DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112
            G  + S  E++        +T      +KD E   +  +   +  N +  + K+ +   
Sbjct: 125 FGLEAGSKPELLAVIALTDNDTPIICNGFKDAEYIEIAMHALKLGRNIIPVVEKYSELEL 184

Query: 113 KLHKKIGLRINPSVSYS-------KFILADPNRPFSRLGEKCKDKIESE--------IKN 157
            L     + + P +              +      S+ G    + ++             
Sbjct: 185 ILEYSAKIGVRPQIGMRVKLASRGAGKWSASGGYRSKFGLTVTEVLKGLEELKSRGMEDC 244

Query: 158 VNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------- 207
              L +H   +    +           I  +       + ++ +GGG+            
Sbjct: 245 FKLLHYHQGSQVSNIRHVKSALVESARIYVDLVRRGAGLCYLDVGGGLGVDYDGSQTDFE 304

Query: 208 ----------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN 257
                        V    Q + + +      +  E G AIV   + L   VL ++E    
Sbjct: 305 SSMNYTIEEYARDVVSHVQGICDAAGVAHPHLLSESGRAIVAFHSMLIFEVLGVAEQTTG 364

Query: 258 LVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAM 291
             I     +A  P   LY+   ++   T   +  
Sbjct: 365 DEIEPVPDDAPSPLRELYEAYQSVTQRTVLESFH 398


>gi|313682358|ref|YP_004060096.1| arginine decarboxylase [Sulfuricurvum kujiense DSM 16994]
 gi|313155218|gb|ADR33896.1| arginine decarboxylase [Sulfuricurvum kujiense DSM 16994]
          Length = 609

 Score = 52.8 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 45/287 (15%), Positives = 89/287 (31%), Gaps = 42/287 (14%)

Query: 12  QKLLNNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLG 66
             L +N   A++     G    +  LK        D + +  +    G  + S  E+ L 
Sbjct: 60  DALYSNFRRAIFENDYTGKFHAVFPLKVNQFPEAVDAIVELGEKYSYGLEAGSKAELALA 119

Query: 67  HEKFG-GETHAYNVAYKDCE-----IDAVLSNCDTIIFNTVSQLNKFKDKAQKL---HKK 117
             K   G     N    +       + A + +  TI    + +L    D AQ        
Sbjct: 120 MAKTAIGAPITVNGFKDEEMVTLGFMAAQMGHNITITIEGLGELEWIIDVAQSCGLKVPN 179

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCEN 169
           IG+R+    S    I A  +   ++ G    + IE+ +         + + + FH   + 
Sbjct: 180 IGIRVRL-QSEGSGIWAKSSGMSAKFGLTSTELIEAMLMLQENNMLEHFSMIHFHIGSQM 238

Query: 170 KSFLCFSAMLKNIEKEFGHFIT----QIEWISLGGGIHFTDKDYPVKDFCQR-------- 217
           +       +L+     +          ++ I++GGG+      +                
Sbjct: 239 QDIAPLKRVLREAGNIYAELKKMGADNLKAINIGGGLAVEYSQHTSTRMRNYTLEEFSNS 298

Query: 218 -------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN 257
                  +          I+ E G  IV + + L   VL++  +   
Sbjct: 299 VVFLLREIMNAKGVAHPDIFTESGRFIVASHSVLIAPVLELFSHDYQ 345



 Score = 38.6 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 17/47 (36%), Gaps = 4/47 (8%)

Query: 317 RISFEDVAGYNINRKNWFNGINMPTI--AVKNVDGTIKAIREFSYND 361
            ++F +V  Y        N    P+    + N  G    I  F+ +D
Sbjct: 509 FLAFFNVGAYQETLGMNHNLFTHPSECTIIINDTGYE--IENFTESD 553


>gi|307721017|ref|YP_003892157.1| arginine decarboxylase [Sulfurimonas autotrophica DSM 16294]
 gi|306979110|gb|ADN09145.1| arginine decarboxylase [Sulfurimonas autotrophica DSM 16294]
          Length = 609

 Score = 52.8 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 47/296 (15%), Positives = 85/296 (28%), Gaps = 49/296 (16%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD----GTTS 57
           IKT  Y   ++ +  N               +  LK        + +         G  +
Sbjct: 59  IKT-LYNYFEKAIEEN--NYKGSFNA-----VFPLKVNQFPAAVEAITSQGAKYNYGLEA 110

Query: 58  SSLYEVMLGHEK-FGGETHAYNVAYKDCE-----IDAVLSNCDTIIFNTVSQLNKFKDKA 111
            S  E++L   K   G     N    +       I A   +  T+    +++L    + A
Sbjct: 111 GSKAELILAMSKTLDGANITVNGFKDEEMLTLGFIAAQSGHNITVTIEGLNELETIIEVA 170

Query: 112 QKLH---KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNVNG 160
            +       IG+R+    S    I A      ++ G    + IE+         I+ +  
Sbjct: 171 AQCSLKVPNIGIRVRL-HSAGSGIWAKSGGMDAKFGLTSTEIIEAVNLLKDAGLIQQLKM 229

Query: 161 LMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQ-IEWISLGGGIHFTDKDYPVKDFCQ 216
           + FH   +               NI  E      + +  I++GGG+      +       
Sbjct: 230 IHFHIGSQMADIAPLKKALREAGNIYAELKKMGAESLSSINIGGGLAVEYDQHEQSHARN 289

Query: 217 R---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN 257
                           +          I+ E G  IV +   L T VL++      
Sbjct: 290 YSIDEFSSSVVFLLGEIMNAKNVAHPDIFTESGRFIVASHAVLITPVLELFTQDYQ 345



 Score = 37.4 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 27/89 (30%), Gaps = 12/89 (13%)

Query: 269 VPDYLLYQESATIYPNTGPYT-----AMVCGRSCLAGDIFG----EFHFEKPVKIGD--- 316
           +PDY    +   + P     T     A +   +C +    G    +  +   V I +   
Sbjct: 449 LPDYWGLGQHFPVMPIHHLNTTPLRAASLWDITCDSDGEIGFNPEKPLYLHDVNIDEEDY 508

Query: 317 RISFEDVAGYNINRKNWFNGINMPTIAVK 345
            ++F +V  Y        N    P     
Sbjct: 509 FLAFFNVGAYQETLGMDHNLFTHPNEYTI 537


>gi|224436999|ref|ZP_03657980.1| arginine decarboxylase [Helicobacter cinaedi CCUG 18818]
 gi|313143471|ref|ZP_07805664.1| arginine decarboxylase [Helicobacter cinaedi CCUG 18818]
 gi|313128502|gb|EFR46119.1| arginine decarboxylase [Helicobacter cinaedi CCUG 18818]
          Length = 616

 Score = 52.8 bits (125), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 45/300 (15%), Positives = 91/300 (30%), Gaps = 49/300 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTLNQYMD-- 53
           P  L     + N +D      + A          K +  LK       +   + Q  D  
Sbjct: 46  PLLLRFPHLIKNQVDKVFKAFEGAIKEYSYKGKFKAVFPLKVNQMPNFVLPLVEQSQDKC 105

Query: 54  -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNK 106
            G  + S  E++L        +      +KD E+       A + +  T+    +++L  
Sbjct: 106 YGLEAGSKSELILAMAYTNKNSPITVNGFKDKEMISLGFSAANMGHDITLTIEGLNELET 165

Query: 107 FKDKAQ---KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EI 155
             + A    + +  IGLRI    S    I A      S+ G    + +E+         +
Sbjct: 166 IIEVAHELGEPYPNIGLRIRL-HSTGVGIWAKSGGINSKFGLTSTELLEAIKMLEKEQLL 224

Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY-- 209
                + FH   +                   +        ++ +++GGG+      +  
Sbjct: 225 HKFTMIHFHIGSQISDISPLKKAIREAGNIYAELRKKGAKNLQCVNIGGGLAVEYTQHEG 284

Query: 210 -------------PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                         V    + + +  ++    I++E G  I  +   L   VL++     
Sbjct: 285 KNNRNYTLSEFSGDVVFSLREIAKNKKEPEPDIFIESGRFIAASHAVLVAPVLELFSQEY 344


>gi|3421202|gb|AAC68531.1| arginine decarboxylase [Sisymbrium altissimum]
          Length = 403

 Score = 52.8 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 33/245 (13%), Positives = 74/245 (30%), Gaps = 28/245 (11%)

Query: 30  VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEKF---GGETHAYNVAYK 82
            + +  +KC     + + + ++      G  + S  E++L    F     E       +K
Sbjct: 1   YQGVYPVKCNQDRFIIEDIVRFGSSFGFGLEAGSKPEILLAMSCFCKGNPEAFLVCNGFK 60

Query: 83  DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134
           D E  +             I+     +L+   D +QK++ +   GLR      +S    +
Sbjct: 61  DSEYVSFALLGRKLELNTVIVLEQEEELDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGS 120

Query: 135 DPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCENKS---FLCFSAMLKNIE 183
                  + G      +              +  L FH   +  S        A    + 
Sbjct: 121 TSGEKG-KFGLTTIQILRVVRNLRQLGMLDCLQLLHFHIGSQIPSTALLSDGVAEAAQLY 179

Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243
            E       ++ I +GGG+          +    +    E+Y+ +  +     +    + 
Sbjct: 180 CELVRLGAHMKVIDIGGGLGIDYDGSKSGESDLSVAYTLEEYA-EAVVASVRFVCDQKSV 238

Query: 244 LNTTV 248
            +  +
Sbjct: 239 KHPVI 243


>gi|3421206|gb|AAC68532.1| arginine decarboxylase [Stanleya pinnata]
          Length = 403

 Score = 52.8 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 33/245 (13%), Positives = 74/245 (30%), Gaps = 28/245 (11%)

Query: 30  VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEKF---GGETHAYNVAYK 82
            + +  +KC     + + + ++      G  + S  E++L    F     E       +K
Sbjct: 1   YQGVYPVKCNQDRFIIEDIVRFGSSFGFGLEAGSKPEILLAMSCFCKGNPEAFLVCNGFK 60

Query: 83  DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134
           D E  +             I+     +L+   D +QK++ +   GLR      +S    +
Sbjct: 61  DSEYVSFALLGRKLELNTVIVLEQEEELDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGS 120

Query: 135 DPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCENKS---FLCFSAMLKNIE 183
                  + G      +              +  L FH   +  S        A    + 
Sbjct: 121 TSGEKG-KFGLTTIQILRVVRNLRQLGMLDCLQLLHFHIGSQIPSTALLSDGVAEAAQLY 179

Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243
            E       ++ I +GGG+          +    +    E+Y+ +  +     +    + 
Sbjct: 180 CELVRLGAHMKVIDIGGGLGIDYDGSKSGESDLSVAYTLEEYA-EAVVASVRFVCDQKSV 238

Query: 244 LNTTV 248
            +  +
Sbjct: 239 KHPVI 243


>gi|149194437|ref|ZP_01871534.1| arginine decarboxylase [Caminibacter mediatlanticus TB-2]
 gi|149135612|gb|EDM24091.1| arginine decarboxylase [Caminibacter mediatlanticus TB-2]
          Length = 608

 Score = 52.8 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 48/353 (13%), Positives = 99/353 (28%), Gaps = 55/353 (15%)

Query: 14  LLNNLDTALYIRKNA--------GVKLLLALKCFAAW----GMFDTLNQYMDGTTSSSLY 61
           +   +++       A            +  LK          +    N++  G  + S  
Sbjct: 54  IRKQINSLYSAFNKAIKEFNYKGKFHAVFPLKVNQFPTFVKPLIKIANKFNYGLEAGSKA 113

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK---------AQ 112
           E++L               +KD ++  +      + ++    +    +           +
Sbjct: 114 ELILAMAYNNKNAPITINGFKDKDMIRLAFIAGFMGYDVTITIEGLNELNSIIEVSKEYE 173

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFH 164
           K+   IG+RI    S    I A      S+ G    + IE+            +  + FH
Sbjct: 174 KIPVNIGIRIRLHTSGVG-IWAKSGGIESKFGLSSTEIIEAIDILKKEKMLDKLKMIHFH 232

Query: 165 NNCENKSFLCFSAMLKN---IEKEFGHFI-TQIEWISLGGGIHFTDKDY----------- 209
              +          ++    I  +        +  I++GGG+      +           
Sbjct: 233 IGSQINDISPLKKAIRESGNIYADLRKMGAKNLSAINIGGGLAIEYSQWEEKRDKNYSIE 292

Query: 210 ----PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSV 265
                V    + + +  E     I+ E G  I + +T L   V+++     +   +    
Sbjct: 293 EFSNDVVYLLKEISQKKEVPMPDIFTESGRFIASPSTILIAPVIELFSQEYHEKNLKLKD 352

Query: 266 EAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRI 318
           +   PD +          N   Y          A D F        + I D I
Sbjct: 353 KN--PDLVEELYDLYKTINENNYIEYFH----DALDHFESLLTLFDLGIIDLI 399


>gi|195996327|ref|XP_002108032.1| hypothetical protein TRIADDRAFT_52094 [Trichoplax adhaerens]
 gi|190588808|gb|EDV28830.1| hypothetical protein TRIADDRAFT_52094 [Trichoplax adhaerens]
          Length = 470

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 9/81 (11%), Positives = 16/81 (19%), Gaps = 7/81 (8%)

Query: 272 YLLYQESATIYPNTGPYTA--MVCGRSCLAGDIFGEFHFEKP---VKIGDRI--SFEDVA 324
                    +            + G +    D      +        I D +     ++ 
Sbjct: 348 MSYGCRYPKVNGKKSKKLYSTCLWGPTVSGSDCIFHECYLPEERDCAIKDILWTILIEMG 407

Query: 325 GYNINRKNWFNGINMPTIAVK 345
            Y       FNG   P     
Sbjct: 408 AYTSVLATNFNGFTRPVSYYV 428


>gi|3421190|gb|AAC68528.1| arginine decarboxylase [Brassica oleracea]
          Length = 401

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 32/245 (13%), Positives = 73/245 (29%), Gaps = 28/245 (11%)

Query: 30  VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEKF---GGETHAYNVAYK 82
            + +  +KC     + + + ++      G  + S  E++L    F     E       +K
Sbjct: 1   YQGVYPVKCNQDRFIIEDIVRFGSSFRFGLEAGSKPEILLAMSCFCKGNPEAFLVCNGFK 60

Query: 83  DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134
           D E  +             I+     +L+   D + K++ +   GLR      +S    +
Sbjct: 61  DSEYVSFALLGRKLELNTVIVLEQEEELDLVIDLSPKMNVRPVIGLRAKLRTKHSGHFGS 120

Query: 135 DPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCENKS---FLCFSAMLKNIE 183
                  + G      +              +  L FH   +  S        A    + 
Sbjct: 121 TSGEKG-KFGLTTIQILRVVRNLRQLGMLDCLQLLHFHIGSQIPSTALLSDGVAEAAQLY 179

Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243
            E       ++ I +GGG+          +    +    E+Y+ +  +     +    + 
Sbjct: 180 CELVRLGAHMKVIDIGGGLGIDYDGSKSGESDLSVAYTLEEYA-EAVVASVRFVCDQKSV 238

Query: 244 LNTTV 248
            +  +
Sbjct: 239 KHPVI 243


>gi|78355618|ref|YP_387067.1| arginine decarboxylase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78218023|gb|ABB37372.1| arginine decarboxylase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 650

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 37/289 (12%), Positives = 78/289 (26%), Gaps = 48/289 (16%)

Query: 11  KQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD----GTTSS 58
           +  L + +       +NA        G + +  +K      + + +  Y      G    
Sbjct: 83  ENILESRISLLHKSFRNAIESLGYQGGYRGVFPIKVNQQQQVIEKIATYGSMYHHGLEVG 142

Query: 59  SLYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKFKDKA 111
           S  E++    +    E       YKD E   +  +          +     +L     ++
Sbjct: 143 SKAELIAAISQAQDKEACIVCNGYKDEEFIDLGLHAVRMGFKCFFVLEMPRELELILRRS 202

Query: 112 QKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDK--------IESEIKNVNGLM 162
           Q++  +  +       S +    +D     S  G               E  +     L 
Sbjct: 203 QQMGVRPLIGTRVKLASKAGGHWSDSGGELSTFGLTTAQIMDVVDRLQKEDMLDCFRLLH 262

Query: 163 FHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------------ 207
           +H   +    +           +          + ++ LGGG+                 
Sbjct: 263 YHLGSQVPNIRDIRSAVMEATRVYAGLVSEGAAMGYLDLGGGLAVDYDGSHTNFVSSRNY 322

Query: 208 --DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDI 251
             D    D  + +    ++       I  E G A V   + L   +LD+
Sbjct: 323 TQDEYCTDIVEAVMSILDETGVPHPHIITESGRATVAYYSMLLFNILDV 371


>gi|217034353|ref|ZP_03439769.1| hypothetical protein HP9810_491g46 [Helicobacter pylori 98-10]
 gi|216943238|gb|EEC22705.1| hypothetical protein HP9810_491g46 [Helicobacter pylori 98-10]
          Length = 615

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 37/301 (12%), Positives = 88/301 (29%), Gaps = 48/301 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL--NQYMD 53
           P  +     +   + +      +A          K +  LK       +F  +   + +D
Sbjct: 49  PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLD 108

Query: 54  -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106
            G  + S  E+++               +KD E+         + +  T+    +++L  
Sbjct: 109 YGLEAGSKSELIIAMSYTNPTAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168

Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155
               A++       +I       S    + A      S+ G    + +E+          
Sbjct: 169 IIAVAKQNEFLACPKIGIRIRLHSTGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228

Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
           ++ + + FH   +                   +        +  +++GGG+      +  
Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288

Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                                + +  ++    I++E G  I  N   L T VL++  +  
Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVTPVLELFSHEY 348

Query: 257 N 257
           N
Sbjct: 349 N 349



 Score = 40.1 bits (92), Expect = 0.60,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%)

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284
           +L   +A+       +  +L I E ++   +++ S    +PD+   +++  + P      
Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDHWGLRQNFPVMPLNKLDE 474

Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337
               +A +   +C +            F   + I +    ++F  V  Y        N  
Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534

Query: 338 NMPTI--AVKNVDGTIKA 353
             PT    V +  G  + 
Sbjct: 535 THPTEFSVVFDEKGDYEV 552


>gi|317014418|gb|ADU81854.1| arginine decarboxylase [Helicobacter pylori Gambia94/24]
          Length = 615

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 34/301 (11%), Positives = 82/301 (27%), Gaps = 48/301 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL---NQYM 52
           P  +     +   + +       A          K +  LK       +   +       
Sbjct: 49  PLLVRFPHLVQKQIKSLFDAFSLAIKEYQYSGAFKAVFPLKVNQMPSFVLPLVQGAKGLN 108

Query: 53  DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106
            G  + S  E+++               +KD E+         + +  T+    +++L  
Sbjct: 109 YGLEAGSKSELIIAMSYTNPTAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168

Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155
               A++       +I       S    + A      S+ G    + +E+          
Sbjct: 169 IIAVAKQNDFVACPKIGIRIRLHSAGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228

Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
           ++ + + FH   +                   +        +  +++GGG+      +  
Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288

Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                                + +  ++    I++E G  I  N   L   VL++  +  
Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348

Query: 257 N 257
           N
Sbjct: 349 N 349



 Score = 39.4 bits (90), Expect = 0.98,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%)

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284
           +L   +A+       +  +L I E ++   +++ S    +PDY   +++  + P      
Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLKQNFPVMPLNKLDE 474

Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337
               +A +   +C +            F   + I +    ++F  V  Y        N  
Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534

Query: 338 NMPTI--AVKNVDGTIKA 353
             PT    V +  G  + 
Sbjct: 535 THPTEFSVVFDEKGDYEV 552


>gi|261839769|gb|ACX99534.1| arginine decarboxylase [Helicobacter pylori 52]
          Length = 615

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 36/314 (11%), Positives = 87/314 (27%), Gaps = 48/314 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL---NQYM 52
           P  +     +   + +      +A          K +  LK       +F  +       
Sbjct: 49  PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLN 108

Query: 53  DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106
            G  + S  E+++               +KD E+         + +  T+    +++L  
Sbjct: 109 YGLEAGSKSELIIAMSYTNPTAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168

Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155
               A++       +I       S    + A      S+ G    + +E+          
Sbjct: 169 IIAVAKQNEFLACPKIGIRIRLHSTGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228

Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
           ++ + + FH   +                   +        +  +++GGG+      +  
Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288

Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                                + +  ++    I++E G  I  N   L   VL++  +  
Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348

Query: 257 NLVIVDSSVEAHVP 270
           N   +      + P
Sbjct: 349 NEKSLKIKENNNPP 362



 Score = 40.1 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%)

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284
           +L   +A+       +  +L I E ++   +++ S    +PDY   +++  + P      
Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474

Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337
               +A +   +C +            F   + I +    ++F  V  Y        N  
Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534

Query: 338 NMPTI--AVKNVDGTIKA 353
             PT    V +  G  + 
Sbjct: 535 THPTEFSVVFDEKGDYEV 552


>gi|217032299|ref|ZP_03437796.1| hypothetical protein HPB128_142g47 [Helicobacter pylori B128]
 gi|298735968|ref|YP_003728493.1| arginine decarboxylase [Helicobacter pylori B8]
 gi|216946065|gb|EEC24678.1| hypothetical protein HPB128_142g47 [Helicobacter pylori B128]
 gi|298355157|emb|CBI66029.1| arginine decarboxylase [Helicobacter pylori B8]
          Length = 615

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 36/314 (11%), Positives = 88/314 (28%), Gaps = 48/314 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL---NQYM 52
           P  +     +   + +      +A          K +  LK       +F  +       
Sbjct: 49  PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLN 108

Query: 53  DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106
            G  + S  E+++       +       +KD E+         + +  T+    +++L  
Sbjct: 109 YGLEAGSKSELIIAMSYTNPKAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168

Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155
               A++       +I       S    + A      S+ G    + +E+          
Sbjct: 169 IIAVAKQNDFVACPKIGIRIRLHSTGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228

Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
           ++ + + FH   +                   +        +  +++GGG+      +  
Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288

Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                                + +  ++    I++E G  I  N   L   VL++  +  
Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348

Query: 257 NLVIVDSSVEAHVP 270
           N   +      + P
Sbjct: 349 NEKSLKIKESNNPP 362



 Score = 40.1 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%)

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284
           +L   +A+       +  +L I E ++   +++ S    +PDY   +++  + P      
Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474

Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337
               +A +   +C +            F   + I +    ++F  V  Y        N  
Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534

Query: 338 NMPTI--AVKNVDGTIKA 353
             PT    V +  G  + 
Sbjct: 535 THPTEFSVVFDEKGDYEV 552


>gi|261838368|gb|ACX98134.1| arginine decarboxylase [Helicobacter pylori 51]
          Length = 615

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 87/301 (28%), Gaps = 48/301 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL--NQYMD 53
           P  +     +   + +      +A          K +  LK       +F  +   + +D
Sbjct: 49  PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLD 108

Query: 54  -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106
            G  + S  E+++               +KD E+         + +  T+    +++L  
Sbjct: 109 YGLEAGSKSELIIAMSYTNPTAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168

Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155
               A++       +I       S    + A      S+ G    + +E+          
Sbjct: 169 IIAVAKQNEFLACPKIGIRIRLHSTGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228

Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
           ++ + + FH   +                   +        +  +++GGG+      +  
Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288

Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                                + +  ++    I++E G  I  N   L   VL++  +  
Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348

Query: 257 N 257
           N
Sbjct: 349 N 349



 Score = 40.1 bits (92), Expect = 0.61,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%)

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284
           +L   +A+       +  +L I E ++   +++ S    +PD+   +++  + P      
Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDHWGLRQNFPVMPLNKLDE 474

Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337
               +A +   +C +            F   + I +    ++F  V  Y        N  
Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534

Query: 338 NMPTI--AVKNVDGTIKA 353
             PT    V +  G  + 
Sbjct: 535 THPTEFSVVFDEKGDYEV 552


>gi|317182285|dbj|BAJ60069.1| arginine decarboxylase [Helicobacter pylori F57]
          Length = 615

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 87/301 (28%), Gaps = 48/301 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL--NQYMD 53
           P  +     +   + +      +A          K +  LK       +F  +   + +D
Sbjct: 49  PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLD 108

Query: 54  -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106
            G  + S  E+++               +KD E+         + +  T+    +++L  
Sbjct: 109 YGLEAGSKSELIIAMSYTNPTAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168

Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155
               A++       +I       S    + A      S+ G    + +E+          
Sbjct: 169 IIAVAKQNEFLACPKIGIRIRLHSTGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228

Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
           ++ + + FH   +                   +        +  +++GGG+      +  
Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288

Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                                + +  ++    I++E G  I  N   L   VL++  +  
Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348

Query: 257 N 257
           N
Sbjct: 349 N 349



 Score = 40.1 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%)

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284
           +L   +A+       +  +L I E ++   +++ S    +PDY   +++  + P      
Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474

Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337
               +A +   +C +            F   + I +    ++F  V  Y        N  
Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534

Query: 338 NMPTI--AVKNVDGTIKA 353
             PT    V +  G  + 
Sbjct: 535 THPTEFSVVFDEKGDYEV 552


>gi|317177783|dbj|BAJ55572.1| arginine decarboxylase [Helicobacter pylori F16]
          Length = 615

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 87/301 (28%), Gaps = 48/301 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL--NQYMD 53
           P  +     +   + +      +A          K +  LK       +F  +   + +D
Sbjct: 49  PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLD 108

Query: 54  -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106
            G  + S  E+++               +KD E+         + +  T+    +++L  
Sbjct: 109 YGLEAGSKSELIIAMSYTNPTAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168

Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155
               A++       +I       S    + A      S+ G    + +E+          
Sbjct: 169 IIAVAKQNEFLACPKIGIRIRLHSTGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228

Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
           ++ + + FH   +                   +        +  +++GGG+      +  
Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288

Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                                + +  ++    I++E G  I  N   L   VL++  +  
Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348

Query: 257 N 257
           N
Sbjct: 349 N 349



 Score = 40.1 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%)

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284
           +L   +A+       +  +L I E ++   +++ S    +PDY   +++  + P      
Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474

Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337
               +A +   +C +            F   + I +    ++F  V  Y        N  
Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534

Query: 338 NMPTI--AVKNVDGTIKA 353
             PT    V +  G  + 
Sbjct: 535 THPTEFSVVFDEKGDYEV 552


>gi|308183138|ref|YP_003927265.1| arginine decarboxylase [Helicobacter pylori PeCan4]
 gi|308065323|gb|ADO07215.1| arginine decarboxylase [Helicobacter pylori PeCan4]
          Length = 615

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/301 (11%), Positives = 87/301 (28%), Gaps = 48/301 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL--NQYMD 53
           P  +     +   + +      +A          K +  LK       +F  +   + +D
Sbjct: 49  PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLD 108

Query: 54  -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106
            G  + S  E+++       +       +KD E+         + +  T+    +++L  
Sbjct: 109 YGLEAGSKSELIIAMSYTNPKAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168

Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155
                ++       +I       S    + A      S+ G    + +E+          
Sbjct: 169 IIAVTKQNDFVACPKIGIRIRLHSAGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228

Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
           ++ + + FH   +                   +        +  +++GGG+      +  
Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288

Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                                + +  ++    I++E G  I  N   L   VL++  +  
Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348

Query: 257 N 257
           N
Sbjct: 349 N 349



 Score = 40.5 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%)

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284
           +L   +A+       +  +L I E ++   +++ S    +PDY   +++  + P      
Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474

Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337
               +A +   +C +            F   + + +    ++F  V  Y        N  
Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDVDEEEYFLAFFLVGAYQEVLGMKHNLF 534

Query: 338 NMPTI--AVKNVDGTIKA 353
             PT    V +  G  + 
Sbjct: 535 THPTEFSVVFDEKGDYEV 552


>gi|114332153|ref|YP_748375.1| arginine decarboxylase [Nitrosomonas eutropha C91]
 gi|114309167|gb|ABI60410.1| arginine decarboxylase [Nitrosomonas eutropha C91]
          Length = 652

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/295 (12%), Positives = 86/295 (29%), Gaps = 44/295 (14%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYM----DGTTSSS 59
           +I   ++     T       +G +     +  +K      +   + +       G    S
Sbjct: 75  VIS-SRVRRLNQTFRKAIHESGYEGTYRSIYPIKVNQLQEVVAEVLEAGQEFNIGLECGS 133

Query: 60  LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTI------IFNTVSQLNKFKDKAQK 113
             E++        ET       KD  +  ++ N   I      I    S+  +  + A+ 
Sbjct: 134 KAELLAMLPLVADETLLLCNGVKDRTMLTLMLNAQQIGQQVMPIIEKYSEFEQLMNLAEA 193

Query: 114 LHKKIGLRINPSVSYSK-FILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLMFH 164
              K  L +   ++        +     S+ G    + ++             +  L FH
Sbjct: 194 RQMKPRLGVRLKLNTKGSGRWFESGGANSKFGLTISELVQLIRTLENREMAGQLELLHFH 253

Query: 165 NNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGG-----------------GIHF 204
              +        + ++ I + +        QI+++ +GG                     
Sbjct: 254 LGSQIADIQVLRSAIREIMQVYADLMLRGMQIKYLDVGGGLGVNYGGDYDNPESSINYGL 313

Query: 205 TDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLV 259
            +    V    + + +  +    Q+  E G A+  + + L   VL + +     +
Sbjct: 314 REYANVVVYTVKEICDQRQVPMPQLLSESGRALTAHHSVLVVPVLGVHKPDSPYM 368


>gi|3421188|gb|AAC68527.1| arginine decarboxylase [Brassica nigra]
          Length = 401

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/245 (12%), Positives = 74/245 (30%), Gaps = 28/245 (11%)

Query: 30  VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEKF---GGETHAYNVAYK 82
            + +  +KC     + + + ++      G  + S  E++L    F     E       +K
Sbjct: 1   YQGVYPVKCNQDRFIIEDIVRFGSSFRFGLEAGSKPEILLAMSCFCKGNPEAFLVCNGFK 60

Query: 83  DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134
           D E  +             I+     +L+   D + K++ +   GLR      +S    +
Sbjct: 61  DSEYVSFALLGRKLELNTVIVLEQEEELDLVIDLSPKMNVRPVIGLRAKLRTKHSGHFGS 120

Query: 135 DPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCENKSFLCFSAMLKNIEKEF 186
                  + G      +              +  L FH   +  S    S  +    + +
Sbjct: 121 TSGEKG-KFGLTTIQILRVVRNLRQLGMLDCLQLLHFHIGSQIPSTALLSDGVAEAAQLY 179

Query: 187 GH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243
                    ++ I +GGG+          +    +    E+Y+ +  +     +    + 
Sbjct: 180 SELVRLGAHMKVIDIGGGLGIDYDGSKSGESDLSVAYTLEEYA-EAVVASVRFVCDQKSV 238

Query: 244 LNTTV 248
            +  +
Sbjct: 239 KHPVI 243


>gi|188527815|ref|YP_001910502.1| arginine decarboxylase [Helicobacter pylori Shi470]
 gi|188144055|gb|ACD48472.1| arginine decarboxylase [Helicobacter pylori Shi470]
          Length = 615

 Score = 52.5 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/301 (11%), Positives = 83/301 (27%), Gaps = 48/301 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL---NQYM 52
           P  +     +   + +      +A          K +  LK       +   +       
Sbjct: 49  PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVLPLVQGAKGLN 108

Query: 53  DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106
            G  + S  E+++               +KD E+         + +  T+    +++L  
Sbjct: 109 YGLEAGSKSELIIAMSYTNPTAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168

Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155
               A++       +I       S    + A      S+ G    + +E+          
Sbjct: 169 IIAVAKQNEFLACPKIGIRIRLHSTGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228

Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
           ++ + + FH   +                   +        +  +++GGG+      +  
Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288

Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                                + +  ++    I++E G  I  N   L   VL++  +  
Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348

Query: 257 N 257
           N
Sbjct: 349 N 349



 Score = 40.5 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%)

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284
           +L   +A+       +  +L I E ++   +++ S    +PDY   +++  + P      
Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474

Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337
               +A +   +C +            F   + + +    ++F  V  Y        N  
Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDVDEEEYFLAFFLVGAYQEVLGMKHNLF 534

Query: 338 NMPTI--AVKNVDGTIKA 353
             PT    V +  G  + 
Sbjct: 535 THPTEFSVVFDEKGDYEV 552


>gi|296124022|ref|YP_003631800.1| arginine decarboxylase [Planctomyces limnophilus DSM 3776]
 gi|296016362|gb|ADG69601.1| arginine decarboxylase [Planctomyces limnophilus DSM 3776]
          Length = 636

 Score = 52.1 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/237 (13%), Positives = 64/237 (27%), Gaps = 31/237 (13%)

Query: 2   IKTPYYLIDKQKLLNNLDTAL----YIRKNAGVK----LLLALKCFAAWGMFDTL----N 49
           + TP  L   Q L N L           +  G +     +  +K      + +       
Sbjct: 60  LHTPLLLRFPQILTNQLKKLATSYIQAIEEYGYQGRHFPVFPMKVNPRREVVEEFLKDSA 119

Query: 50  QYMDGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK 108
           ++  G    S  E+  G  +     +      +KD     +         N V  + K  
Sbjct: 120 RFNVGLECGSKPELYAGLAQVQHPNSLLICNGFKDDSFIRLAMLGVEAGKNVVIVIEKLS 179

Query: 109 DKAQKLHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           +    L+      + P         S      A      ++ G    + ++         
Sbjct: 180 ELITTLNLADETGVMPMIGLRSKLYSRGSGKWASSGGDSAKFGLTTSELLDCVRLLKDRG 239

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK 207
              ++  L  H   +          +K   + +       T I+ + +GGG+     
Sbjct: 240 RLSSLKLLHSHIGSQITEIKRVKMAMKEAARVYAKLRQLGTPIDTMDIGGGLGVDYD 296



 Score = 39.0 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 22/73 (30%), Gaps = 13/73 (17%)

Query: 296 SCLAGDIFGEFHFEKPV---------KIGD--RISFEDVAGYNINRKNWFNGINMP--TI 342
           +C +     +F   K V         K  +   +    V  Y     ++ N   +P    
Sbjct: 502 TCDSDGRIDKFVDLKDVREVLELHKWKPEEPYYLGIFLVGAYQEVMGSFHNLFGLPNEAH 561

Query: 343 AVKNVDGTIKAIR 355
            V + +G     +
Sbjct: 562 VVMDAEGRWHITK 574


>gi|294141296|ref|YP_003557274.1| biosynthetic arginine decarboxylase [Shewanella violacea DSS12]
 gi|293327765|dbj|BAJ02496.1| biosynthetic arginine decarboxylase [Shewanella violacea DSS12]
          Length = 656

 Score = 52.1 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/311 (12%), Positives = 90/311 (28%), Gaps = 55/311 (17%)

Query: 1   MIKT----PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTL 48
           M+K+    P  +   Q L + +++  +            +   L+  +K      + + +
Sbjct: 72  MVKSGVALPVLVRFPQILHHRVNSLCHAFNLAIQKYQYESDYLLVYPIKVNQQQTVVEEI 131

Query: 49  -----NQYM--DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEID------AVLSNCD 94
                ++ +   G  + S  E+M          +      YKD E          L +  
Sbjct: 132 LASQKSKEVPQLGLEAGSKPELMAVLAMAQKASSVIICNGYKDIEYIRLALIGEKLGHKV 191

Query: 95  TIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI-- 151
            I+   +S+L     +A+KL     L +   +++        +     + G      +  
Sbjct: 192 YIVLEKLSELKCILQEAKKLGVTPRLGLRVRLAFQGKGKWQASGGEKSKFGLSAAQVLTV 251

Query: 152 ------ESEIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGI 202
                 E  +  +  L FH   +    +      +       E     T ++   +GGG+
Sbjct: 252 IESLKDEEMLDCLQLLHFHLGSQIANIRDIRQGVSEAGRFYCELQKLGTNVKCFDVGGGL 311

Query: 203 HFTDK--------------DYPVKDFCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLN 245
                                   +    L +  ++Y   +     E G  +  +   L 
Sbjct: 312 AVDYDGTRSQSSNSMNYGLTEYANNIVSVLTDICKEYQQPMPQIISESGRYLTAHHAVLI 371

Query: 246 TTVLDISENIK 256
           + V+       
Sbjct: 372 SDVIGTEAYKP 382


>gi|51703308|gb|AAR84411.2| arginine decarboxylase [Daucus carota]
          Length = 570

 Score = 52.1 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 60/200 (30%), Gaps = 25/200 (12%)

Query: 33  LLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYKDCE 85
             A+KC     + D + ++      G  + S  E++L          ++      +KD E
Sbjct: 1   FYAVKCNQDKFVVDDIVKFGSAFRFGLEAGSKPELLLAMSALCKGSPDSFLVCNGFKDAE 60

Query: 86  IDAVLSNCDTIIFNTVS--QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPN-----R 138
              +      + FNTV   +L +  D    L +K+G+R    +          +      
Sbjct: 61  YITLALIGRKLNFNTVIVLELEEEVDLVIDLSRKLGVRPVIGMRAKLRTKHQGHFGSTSG 120

Query: 139 PFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFG 187
              + G      +              +  L FH   +  +             +  E  
Sbjct: 121 EKGKFGLTTTQILRVVKKLAQCGMLDCLQLLHFHIGSQIPTTALLADGVGEAAQVYCELV 180

Query: 188 HFITQIEWISLGGGIHFTDK 207
               ++  I +GGG+     
Sbjct: 181 RLGARMGVIDIGGGLGIDYD 200


>gi|291288493|ref|YP_003505309.1| arginine decarboxylase [Denitrovibrio acetiphilus DSM 12809]
 gi|290885653|gb|ADD69353.1| arginine decarboxylase [Denitrovibrio acetiphilus DSM 12809]
          Length = 641

 Score = 52.1 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/294 (13%), Positives = 89/294 (30%), Gaps = 44/294 (14%)

Query: 19  DTALYIRKNAG----VKLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLGHEKF 70
           +T   + K  G     K +  +K      + +T+ +Y      G  + S  E++      
Sbjct: 86  ETFRNVIKETGYTGEFKGVFPIKVNQQEQVIETITKYGKKYNHGLEAGSKPELIAAISML 145

Query: 71  GG-ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLN------KFKDKAQKLHKKIGLRIN 123
              + +     YKD E   +  +   + FN    +          ++A+K+  K  L + 
Sbjct: 146 DNRDAYLICNGYKDEEFIDLGLHAVKMGFNCYFVVEVPGEINVILERAKKMGVKPLLGLR 205

Query: 124 PSVSYSKFILADPNRPFSR-LGEKCKDKIE--------SEIKNVNGLMFHNNCENKSFLC 174
             ++         +   +   G      I+        + +  ++ L +H   +  +   
Sbjct: 206 TKLTTQAEGQWSESGGDNSVFGLTISQMIDVIDKLKEENMLDCLHLLHYHIGSQIANIRD 265

Query: 175 FSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDK--------------DYPVKDFCQR 217
             A      + +         ++ I  GGG+                   +    D  + 
Sbjct: 266 IRAGAMEACRVYEEMVKEGANMKIIDFGGGLAVDYDGSNTNYHSSRNYSTEEYCYDIVES 325

Query: 218 LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH 268
           +    +K       I  E G A V   + L   +LD+S    + +        +
Sbjct: 326 IITVLDKNNIPHPTIITESGRATVAYYSVLLFNILDVSSFTPHPLPEKLPETTN 379


>gi|330508848|ref|YP_004385276.1| arginine decarboxylase [Methanosaeta concilii GP-6]
 gi|328929656|gb|AEB69458.1| arginine decarboxylase [Methanosaeta concilii GP-6]
          Length = 652

 Score = 52.1 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/295 (11%), Positives = 80/295 (27%), Gaps = 46/295 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIR-------KNAG-VKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  L   Q L + +D               +G  + +  +K      + + + +Y     
Sbjct: 59  PVLLRFPQMLEDRIDEITGAFMGAIEEFNYSGTYQPIFPMKVNQRKEVIEYIIKYGAKHK 118

Query: 54  -GTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDA-----VLSNCDTIIFNTVSQLNK 106
            G    +  E++                 YKD +           N   I+ +   ++  
Sbjct: 119 IGMEVGTKAELLAALSLGLPRYAPLICNGYKDEDYLRLALSIHNLNNIIIVVDLFEEIYD 178

Query: 107 FKDKAQKLHKKIGLRINPSVSYSK-FILADPNRPFSRLGEKCKDKIES--------EIKN 157
               A  +     + +   +         +     ++ G    + +E            +
Sbjct: 179 ILKYADAMGVVPRVGMRVKLFARGSGRWVESGGESAKFGLSTSEALELMRILEERGLTSS 238

Query: 158 VNGLMFHNNCENKSFLCFSAMLKNIEKEFGH--FITQIEWISLGGGIHFTDK-------- 207
           +  L FH   +          +    + +     +  IE++++GGG+             
Sbjct: 239 LKMLHFHIGSQITDIRTVKNAMNEAARVYAKARKMADIEYLNVGGGLSVDYNGSNTATPS 298

Query: 208 ---------DYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE 253
                       +    Q++ +  E     I  E G AI    + L   ++    
Sbjct: 299 SANYSLQEYANDIVYTVQKICDDEEVPCPTIVSESGRAIAAYHSMLIFKIIGRKN 353


>gi|34495199|emb|CAE02645.1| arginine decarboxylase [Lotus japonicus]
          Length = 587

 Score = 52.1 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 63/225 (28%), Gaps = 33/225 (14%)

Query: 16  NNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEV 63
           N L++               +  + +  +KC     + + + ++      G  S S  E+
Sbjct: 20  NRLESLQSAFDYAVQSEGYGSHYQGVYPVKCNQDRFVVEDIVRFGSSFRFGLESGSKPEL 79

Query: 64  MLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKL 114
           ++          E       +KD E  ++            I+     +++   D + K+
Sbjct: 80  LMAMSCLCKGNAEALLICNGFKDAEYISLALAARKLALNSVIVLEQEEEVDLIIDLSNKM 139

Query: 115 HKKIGLRINPSVSY-SKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHN 165
           H +  + +   +           +    + G      +              +  L FH 
Sbjct: 140 HIRPVIGMRAKLRTKHSGHFGGTSGERGKFGLTTAQILRVVKKLEHAGMLDCLQLLHFHI 199

Query: 166 NCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207
             +  S             I  E      Q+  I +GGG+     
Sbjct: 200 GSQIPSTALLADGVGEAAQIYCELVRLGAQMRVIDIGGGLGIDYD 244


>gi|207722228|ref|YP_002252664.1| siderophore synthesis decarboxylase (partial sequence c terminus)
           protein [Ralstonia solanacearum MolK2]
 gi|207728413|ref|YP_002256807.1| putative siderophore synthesis decarboxylase (partial sequence c
           terminus) protein [Ralstonia solanacearum MolK2]
 gi|206587404|emb|CAQ17986.1| putative siderophore synthesis decarboxylase (partial sequence c
           terminus) protein [Ralstonia solanacearum MolK2]
 gi|206591659|emb|CAQ57271.1| putative siderophore synthesis decarboxylase (partial sequence c
           terminus) protein [Ralstonia solanacearum MolK2]
          Length = 114

 Score = 52.1 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 26/94 (27%), Gaps = 3/94 (3%)

Query: 249 LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHF 308
                         +   A VP+           P+       +CG  C   D+      
Sbjct: 4   GGTHHFRLPASWQHNHPFAIVPNAQW--TYPFARPSVQAQAVTLCGELCTPKDVLARDVV 61

Query: 309 EKPVKIGDRISFEDVAGYNINRKNW-FNGINMPT 341
              + +GDRI F+    Y  +  +  F     P 
Sbjct: 62  VDRLSVGDRIVFQLAGAYGWHISHHDFLSHPHPE 95


>gi|109900172|ref|YP_663427.1| arginine decarboxylase [Pseudoalteromonas atlantica T6c]
 gi|109702453|gb|ABG42373.1| arginine decarboxylase [Pseudoalteromonas atlantica T6c]
          Length = 642

 Score = 52.1 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/313 (10%), Positives = 90/313 (28%), Gaps = 48/313 (15%)

Query: 5   PYYLIDKQKLLNN--------LDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +     L +         ++T    +       +  +K      + + +        
Sbjct: 66  PVVVRFHDILRSQVACLNQTFINTIEEAQYQGKYMGVYPVKVNQMREVVEEIVDAGAPFN 125

Query: 54  -GTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK- 110
            G  + S  E++         ++      YKD E   +      +    +  + K+ +  
Sbjct: 126 YGLEAGSKAELITVMAYNTNIDSLTILNGYKDAEFMRLALLGRKLGRKMIVVIEKYSELS 185

Query: 111 -----AQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK-------- 156
                A++L     + +   ++       + +     + G    + I +           
Sbjct: 186 LLVNAAKQLDVMPIIGLRSKMTVKGRGKWESSGGDRAKFGLTTSEMICAARYLESEGMGE 245

Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------ 207
            +  L FH   +    ++     +    I  E      ++E++ +GGG+           
Sbjct: 246 CLKLLHFHIGSQLTDIRAVKEAISEGGRIYAELHRMGFKLEYVDVGGGLGIDYDGSKSTN 305

Query: 208 ----DYPVKDFCQRLKEFSEK-------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
               +Y ++++   +     +           +  E G AI  + + +   V+       
Sbjct: 306 DSSRNYTMEEYVADVVYGMREVCDLEGVPHPTLVSESGRAITAHHSCVVAQVVGEIRANS 365

Query: 257 NLVIVDSSVEAHV 269
             +  D     HV
Sbjct: 366 AELPTDKLPNDHV 378


>gi|77360018|ref|YP_339593.1| arginine decarboxylase [Pseudoalteromonas haloplanktis TAC125]
 gi|76874929|emb|CAI86150.1| arginine decarboxylase, PLP-binding, biosynthetic
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 637

 Score = 52.1 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/325 (12%), Positives = 89/325 (27%), Gaps = 51/325 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDT-------LN 49
           P  +   Q L + + +       A           L+  +K      + +        L 
Sbjct: 62  PALVRFPQILHHRVHSLCAAFNTAIADYGYPKDYLLVYPIKVNQQREVVEEIVASQAQLE 121

Query: 50  QYMDGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
           +   G  + S  E++  L   +        N       +        L +   I+   +S
Sbjct: 122 KKQLGLEAGSKPELLTVLALAEKTSAVIVCNGYKDKEYVRLALIGEKLGHKVYIVLEKLS 181

Query: 103 QLNKFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIE--------S 153
           +L+    +A++L+ K  + I     S  K          S+ G      +          
Sbjct: 182 ELDMVLSQAKELNVKPRIGIRVRLASQGKGKWQASGGEKSKFGLSASQVLHVVNRLKESD 241

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207
           ++  V  + FH   +    +      +       E      +IE + +GGG+        
Sbjct: 242 QLDLVQLVHFHLGSQMANIRDVRLGVSEAARFYCELRKLGAKIECLDVGGGLAVDYDGTR 301

Query: 208 -------DYPVKDFCQRLKEFSEKYSVQI-------YLEPGEAIVTNTTTLNTTVLDISE 253
                  +Y + ++   +         Q          E G A+  +   L + V+    
Sbjct: 302 SQSHNSMNYSLAEYANNIVYTIGDICKQYEQPFPTIISESGRALTAHHAVLISNVIGTES 361

Query: 254 NIKNLVIVDSSVEAHVPDYLLYQES 278
                +   +     +   +     
Sbjct: 362 YTPEEIEAPADDAPQLLKNMWMSWQ 386


>gi|126465116|ref|YP_001040225.1| arginine decarboxylase [Staphylothermus marinus F1]
 gi|126013939|gb|ABN69317.1| arginine decarboxylase [Staphylothermus marinus F1]
          Length = 589

 Score = 51.7 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/273 (14%), Positives = 79/273 (28%), Gaps = 40/273 (14%)

Query: 18  LDTALYIRKNAG----VKLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLGHEK 69
            +  +   +  G     K +  LK  +   + DT+ +Y      G  + +  EV L  + 
Sbjct: 70  YEAFMEAFRKFGYKGAFKPVYPLKSNSTPIVVDTIWRYGIKYSWGFNAGTYPEVKLISKY 129

Query: 70  F--GGETHAYNVAYK----DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                     +        D       S    +   ++   +     ++     IGLR+ 
Sbjct: 130 INEKPRLLVVDGIKDNKLLDLLSKMCDSWEIIVDIESMRDADLL---SKYQDLNIGLRVK 186

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN------GLMFHNNCENKS----FL 173
            + S S  + +  +   S+ G       E   K+         L  H   +         
Sbjct: 187 VT-SKSSGLWSHSSGLDSKFGLLINTLDEMVEKHPWVPNRTVLLHVHAGSQITDKNRLED 245

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFS-- 222
                +             I +I  GGG+ +            +Y + ++ + L +    
Sbjct: 246 IIRETIILYNNLVKTGFKNIRYIDFGGGLAYPYIEASNHVFSANYSLNEYAEILVKELVK 305

Query: 223 -EKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254
             + +  I  E G  IV       T ++D    
Sbjct: 306 SAENTPDIVFEGGRYIVAPHRITVTKIIDTRPY 338


>gi|154148932|ref|YP_001406487.1| arginine decarboxylase [Campylobacter hominis ATCC BAA-381]
 gi|153804941|gb|ABS51948.1| arginine decarboxylase [Campylobacter hominis ATCC BAA-381]
          Length = 613

 Score = 51.7 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 48/285 (16%), Positives = 83/285 (29%), Gaps = 42/285 (14%)

Query: 13  KLLNNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLGH 67
           ++ +N   A    +  G    +  LK     G    L +       G  + S  E++L  
Sbjct: 62  EIYSNFARARKEFEYKGEFHAVYPLKVNQYPGFVKNLVKLGKHYKYGLEAGSKAELLLAM 121

Query: 68  EKFGGETHAYNVAYKDC------EIDAVLSNCDTIIFNTVSQLNKFKDKA---QKLHKKI 118
                +       +KD        I A + +  TI    +S+L    + A         I
Sbjct: 122 TYNNFDAPITVNGFKDKELINIGFIAAEMGHNITITIEGLSELKAIIETAKERFAPKPFI 181

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNVNGLMFHNNCENK 170
           GLRI    S    I A      S+ G    + IE+         I     + FH   +  
Sbjct: 182 GLRIRLHNSG-TGIWAKSGGINSKFGLTSTELIEAISMLKEANLIDRFTMIHFHIGSQIS 240

Query: 171 SFLCFSAMLKNIEKEFGHFIT----QIEWISLGGGIHFTDKD---------------YPV 211
                   L      +          ++ I+LGGG+                       V
Sbjct: 241 EIHPLKKALTEAGNIYAELRKMGACNLKSINLGGGLAIEYSQTKENANRNYTLREYANDV 300

Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
               + +    +     I++E G  +  +   L   VL++     
Sbjct: 301 VFLLKTIANHKKVDEPDIFVESGRFVSASHAVLIAPVLELFSQEY 345



 Score = 37.8 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 57/171 (33%), Gaps = 19/171 (11%)

Query: 214 FCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL 273
           +   +   + +  V + ++   +++ N       +L I + ++   +V+ S+   +PD+ 
Sbjct: 397 YVDLIDRSNGEILVHLIMKKSISMLGN-KQNYADLLKIQDEVQERYLVNFSIFQSLPDFW 455

Query: 274 LYQESATIYPNTGPYT-----AMVCGRSCLA-----GDIFGEFHFEKPV---KIGDRISF 320
             ++   I P           A +   +C +      D      F   +   K    I F
Sbjct: 456 GIKQHFPIMPLEKLDERPTLSASIWDITCDSDGEISFDSIKNPLFLHDIDPEKENYFIGF 515

Query: 321 EDVAGYNINRKNWFNGINMPTIAVKN--VDGTIKA---IREFSYNDYYNNL 366
             V  Y        N    PT A      DG  +    +   S +D   ++
Sbjct: 516 FLVGAYQEVLGMSHNLFAHPTEATIRLKDDGGYEICDLLESQSVSDILEDM 566


>gi|282857080|ref|ZP_06266327.1| metal-activated pyridoxal enzyme [Pyramidobacter piscolens W5455]
 gi|282585089|gb|EFB90410.1| metal-activated pyridoxal enzyme [Pyramidobacter piscolens W5455]
          Length = 369

 Score = 51.7 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/330 (13%), Positives = 93/330 (28%), Gaps = 13/330 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           + TP  L+D++ +++N+          GV L    K      +          G   + L
Sbjct: 6   LDTPALLVDREIMMDNIRAMQNRANRKGVALRPHTKTHKTPAIALIQRDCGCKGIAVAKL 65

Query: 61  YEVM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E   +    F  +    N    D ++  +     +I  +         + A+K+     
Sbjct: 66  GEAEVMADAGFD-DIFIANEIVGDIKMKRLRKLAQSIKLSWGIDCPDHVEAAEKVFASAS 124

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNG-LMFHNNCEN--------K 170
           ++    V              S   +      ++   ++ G      +C N        K
Sbjct: 125 VKAEVLVEIEVGERRSGIIEESDFLDLLDSIKKAPHVHLKGVFSHEGHCYNSPDLATCRK 184

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY 230
            F+          +       +IE +S+G        D+PV +     +  +        
Sbjct: 185 EFIASQKRTLRFVQIAKEQGFEIETVSIGSTPSLMHDDFPVLEGISEFRPGTYVLMDASM 244

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA 290
                 +     T+  TV+      + ++ V +              +  +    G    
Sbjct: 245 ANAAGTLSRCAATVLATVISRPTPERVILDVGAKGITMQRRSQGITATEGLGTVKGYDNV 304

Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
            +         I     F   VKIGD++  
Sbjct: 305 YIHD-VYDEHAIIYNKTFHDAVKIGDKVEI 333


>gi|120437944|ref|YP_863630.1| arginine decarboxylase [Gramella forsetii KT0803]
 gi|117580094|emb|CAL68563.1| arginine decarboxylase [Gramella forsetii KT0803]
          Length = 467

 Score = 51.7 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 52/393 (13%), Positives = 110/393 (27%), Gaps = 61/393 (15%)

Query: 13  KLLNNLDT----ALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYMDGTTSSSLYE-- 62
           K+  N++          +    K         K      + +   +      +SS ++  
Sbjct: 52  KISQNINRAKDWFKSAIEKHDYKGSYNYCYCTKSSHFEHVLNEALKNDIHIETSSAFDIN 111

Query: 63  ----VMLGHEKFGGETHAYNVAYKDCEIDAVL---SNCDTIIFNTVSQLNKFKDKAQKLH 115
               +    +         N   +D  I+ +    +         +    +    ++K+ 
Sbjct: 112 IVEKLKKAGKISDDRWVICNGFKRDQYIENISRLLNGGHKNCLPIIDNYEELDLLSEKID 171

Query: 116 KKIGLRINPSVSYSKFILADPNRPF----SRLGEKCKDKIESEIKNVNGLMFHNNCENKS 171
            K  + I  +           +R      + +    K   E++   +  L F  N   + 
Sbjct: 172 DKFQVGIRIASEEEPKFEFYTSRLGIGYKNIVPFYNKQIKENDQVELKMLHFFINTGIRD 231

Query: 172 FLCFSAMLKNI---EKEFGHFITQIEWISLGGGIH----------FTDKDYPVKDFCQRL 218
              +   L                ++ +++GGG            +      + +  +  
Sbjct: 232 TAYYWNELNKCLKVYIALKKVAPHLDSLNIGGGFPIKNSLAFEYDYAYMVDEIINHIKLT 291

Query: 219 KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLLYQ 276
            + +E     I+ E G   V  +      VL   +        +++SS    +PD     
Sbjct: 292 CDDAEVDVPNIFTEFGSFTVGESGGAIYEVLYQKQQNDREKWNMINSSFITTLPDTWAIS 351

Query: 277 ES----ATIYPNTGPYTAMVCGRSCLAGDI-----------FGEFHFEKPVKIGDRISFE 321
           +     A    N      ++ G +C + D              +F  EKP+ IG    F 
Sbjct: 352 KKFVMLAVNRWNDEYERVLLGGLTCDSDDYYNSEQHTNAIYLPKFKKEKPLYIG----FF 407

Query: 322 DVAGYNINRKNWFNG-----INMPTIAVKNVDG 349
           +   Y       F G     I  P   + N D 
Sbjct: 408 NTGAYQDTIG-GFGGLQHCLIPQPKHILINKDE 439


>gi|323697600|ref|ZP_08109512.1| arginine decarboxylase [Desulfovibrio sp. ND132]
 gi|323457532|gb|EGB13397.1| arginine decarboxylase [Desulfovibrio desulfuricans ND132]
          Length = 637

 Score = 51.7 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/295 (12%), Positives = 80/295 (27%), Gaps = 42/295 (14%)

Query: 18  LDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLGH-EKFGG 72
           L     +           +K      + + + ++      G  + S  E++         
Sbjct: 86  LQAMKKLAYRGSYLGAYPIKVNQQQQVVEAVTRHGRRYHHGLEAGSKAELIAALGMHNDP 145

Query: 73  ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------FKDKAQKLHKKIGLRINPSV 126
           E       YKD E   +  +   + F  V  +          ++++ L  K  L +   +
Sbjct: 146 EAVLVCNGYKDEEFVDLALHAVQLGFQCVLVVEMPNELPLIIERSKALGVKPILGVRAKL 205

Query: 127 SYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNVNGLMFHNNCENKSFLCFSA 177
           S         +       G      IE        + +  +  L +H   +  +     A
Sbjct: 206 SSQATGQWAESGGDRSIFGLNATQIIEVIDRLGEANMLDCLQLLHYHLGSQIPNIREIRA 265

Query: 178 MLKNIEKEFG---HFITQIEWISLGGGIHFTDK--------------DYPVKDFCQRLKE 220
            +    + +         + ++ LGGG+                        D  + +  
Sbjct: 266 GVAEASRIYAGLTAEGAGMRYLDLGGGLAVDYDGTRTSLSSSRNYSVHEYCADVIEGVMT 325

Query: 221 FSEKY---SVQIYLEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVP 270
             ++       I  E G A+V   + L   V+D    E       +      H+ 
Sbjct: 326 VLDEQGVDHPTIITESGRALVAYYSVLLLNVVDAARFEPEPLPEALPEDTNIHIR 380


>gi|297380210|gb|ADI35097.1| arginine decarboxylase [Helicobacter pylori v225d]
          Length = 615

 Score = 51.7 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/301 (11%), Positives = 83/301 (27%), Gaps = 48/301 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL---NQYM 52
           P  +     +   + +      +A          K +  LK       +   +       
Sbjct: 49  PLLVRFPHLVQKQIKSLFDAFFSAIKEYQYSGAFKAVFPLKVNQMPSFVLPLVQGAKGLN 108

Query: 53  DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106
            G  + S  E+++               +KD E+         + +  T+    +++L  
Sbjct: 109 YGLEAGSKSELIIAMSYTNPTAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168

Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155
               A++       +I       S    + A      S+ G    + +E+          
Sbjct: 169 IIAVAKQNEFLACPKIGIRIRLHSTGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228

Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
           ++ + + FH   +                   +        +  +++GGG+      +  
Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288

Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                                + +  ++    I++E G  I  N   L   VL++  +  
Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348

Query: 257 N 257
           N
Sbjct: 349 N 349



 Score = 40.5 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%)

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284
           +L   +A+       +  +L I E ++   +++ S    +PDY   +++  + P      
Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474

Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337
               +A +   +C +            F   + + +    ++F  V  Y        N  
Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDVDEEEYFLAFFLVGAYQEVLGMKHNLF 534

Query: 338 NMPTI--AVKNVDGTIKA 353
             PT    V +  G  + 
Sbjct: 535 THPTEFSVVFDEKGDYEV 552


>gi|260432796|ref|ZP_05786767.1| arginine decarboxylase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260416624|gb|EEX09883.1| arginine decarboxylase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 629

 Score = 51.7 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/327 (11%), Positives = 80/327 (24%), Gaps = 34/327 (10%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLL----ALKCFAAWGMFDTLNQYM----DGTTSSSL 60
             ++++ +  ++        G K        +K      + D + ++      G  + S 
Sbjct: 68  YLEREIAHINESFRDAIARTGYKGSYRGVFPIKVNQQAQVVDRIVEFGKQYNYGLEAGSK 127

Query: 61  YEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFN------TVSQLNKFKDKAQK 113
            E+++        E        KD E   +      I FN      +  + +   +   +
Sbjct: 128 PELVIALAHRLAPEALIVCNGVKDAEFIELAILSRKIGFNTVIVLESPKEADTVIEVYNE 187

Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSR-LGEKCKDKIESEI--------KNVNGLMFH 164
           L  +  L +   ++         +       G      +              +     H
Sbjct: 188 LGIEPLLGVRVKLTNQISGKWQESSGDRSTFGMNTDQLVAVVDKLRDAGLLHCLKLQHSH 247

Query: 165 NNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEF 221
              +                   E       +  + LGGG+         K     +   
Sbjct: 248 LGSQVPDVNDVRRAVGEACRYYTELTREGVPLTHLDLGGGMGVDYTGE-KKATENSINYT 306

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH---VPDYLLYQES 278
            E+Y   +  E     +      + T++  S                   + D     E 
Sbjct: 307 VEEYCANVV-ETVAYAMDEAEVDHPTLVTESGRAVVATSSMLVFNVLESTLYDAPNGPEV 365

Query: 279 ATIYPNTGPYTAMVCGRSCLAGDIFGE 305
                +     A V G   L+ D   E
Sbjct: 366 EPDDHHLVSDLAAVNGY--LSHDRLQE 390


>gi|332308197|ref|YP_004436048.1| arginine decarboxylase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332175526|gb|AEE24780.1| arginine decarboxylase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 640

 Score = 51.7 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/313 (11%), Positives = 90/313 (28%), Gaps = 48/313 (15%)

Query: 5   PYYLIDKQKLLNN--------LDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +     L +         +DT    +       +  +K      + + +        
Sbjct: 64  PVVVRFHDILRSQVACLNQTFIDTIEEAQYQGKYMGVYPVKVNQMREVVEEIVDAGAPFN 123

Query: 54  -GTTSSSLYEVMLGHEK-FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK- 110
            G  + S  E++         ++      YKD E   +      +    +  + K+ +  
Sbjct: 124 YGLEAGSKAELITVMAYNTNIDSLTILNGYKDAEFMRLALLGRKLGRKMIVVIEKYSELG 183

Query: 111 -----AQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK-------- 156
                A++L+    +     ++       + +     + G    + I +           
Sbjct: 184 LLVDAAKQLNVMPIIGFRSKMTVKGRGKWESSGGDRAKFGLTTSEMICAARYLESQGMGE 243

Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------ 207
            +  L FH   +    ++     +    I  E      ++E++ +GGG+           
Sbjct: 244 CLKLLHFHIGSQLTDIRAVKEAISEGGRIYAEMHRMGFKLEYVDVGGGLGIDYDGSQSTN 303

Query: 208 ----DYPVKDFCQRLKEFSEK-------YSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
               +Y ++++   +     +           +  E G AI  + + +   V+       
Sbjct: 304 DSSRNYTMEEYVADVVYGMREVCDLEGVPHPTLVSESGRAITAHHSCVVAQVVGEIRANS 363

Query: 257 NLVIVDSSVEAHV 269
             +  D     HV
Sbjct: 364 AELPTDPLPNDHV 376


>gi|323496406|ref|ZP_08101464.1| arginine decarboxylase [Vibrio sinaloensis DSM 21326]
 gi|323318683|gb|EGA71636.1| arginine decarboxylase [Vibrio sinaloensis DSM 21326]
          Length = 636

 Score = 51.7 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/272 (11%), Positives = 70/272 (25%), Gaps = 35/272 (12%)

Query: 5   PYYLIDKQKLLNN----LDTALYIRKN----AGVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +   Q L               +         L+  +K      + D + +      
Sbjct: 61  PVLVRFPQILHQRVHGICQAFNQAIEEYQYSNNYLLVYPIKVNQQKEVVDEILESQAQLE 120

Query: 54  ----GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
               G  + S  E++  L   +        N       +        L +   I+   +S
Sbjct: 121 TKQLGLEAGSKPELLAVLALAQKASSVIVCNGYKDREYVRLALIGEKLGHKVFIVLEKLS 180

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153
           +L+    +A+ L  K  L I   ++         +     + G      +        E 
Sbjct: 181 ELDLVLKEAKSLGVKPRLGIRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVIERLKQEE 240

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
           ++  +  + FH   +    +              E       I++  +GGG+        
Sbjct: 241 QLDAMQLVHFHLGSQMANIRDIRNGVNESARFYCELRAMGAGIKYFDIGGGLAVDYDG-T 299

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTT 242
                  +     +Y+  I    G+       
Sbjct: 300 RSQSSNSMNYGLIEYARNIVSTVGDVCQQYGQ 331


>gi|3421180|gb|AAC68525.1| arginine decarboxylase [Boechera stricta]
          Length = 405

 Score = 51.7 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/245 (13%), Positives = 73/245 (29%), Gaps = 28/245 (11%)

Query: 30  VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82
            + +  +KC     + + + ++      G  + S  E++L          E       +K
Sbjct: 1   YQGVYPVKCNQDRFIIEDIVEFGSSFRFGLEAGSKPEILLAMSCLCKGNPEAFLVCNGFK 60

Query: 83  DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134
           D E  ++            I+     +L+   D +QK++ +   GLR      +S    +
Sbjct: 61  DSEYISLALFGRKLELNTVIVLEQEEELDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGS 120

Query: 135 DPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKS---FLCFSAMLKNIE 183
                  + G      +              +  L FH   +  S        A    + 
Sbjct: 121 TSGEKG-KFGLTTIQILRVVRKLRQVGMLDCLQLLHFHIGSQIPSTALLSDGVAEAAQLY 179

Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243
            E       ++ I +GGG+          +    +    E+Y+    +     +    + 
Sbjct: 180 CELVRLGAHMKVIDIGGGLGIDYDGSKSGESDLSVAYSLEEYA-AAVVASVRFVCDQKSV 238

Query: 244 LNTTV 248
            +  +
Sbjct: 239 KHPVI 243


>gi|3421198|gb|AAC68530.1| arginine decarboxylase [Arabidopsis arenosa]
          Length = 405

 Score = 51.7 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/245 (13%), Positives = 73/245 (29%), Gaps = 28/245 (11%)

Query: 30  VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82
            + +  +KC     + + + ++      G  + S  E++L          E       +K
Sbjct: 1   YQGVYPVKCNQDRFIIEDIVEFGSSFRFGLEAGSKPEILLAMSCLCKGNPEAFLVCNGFK 60

Query: 83  DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134
           D E  ++            I+     +L+   D +QK++ +   GLR      +S    +
Sbjct: 61  DSEYISLALFGRKLELNTVIVLEQEEELDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGS 120

Query: 135 DPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKS---FLCFSAMLKNIE 183
                  + G      +              +  L FH   +  S        A    + 
Sbjct: 121 TSGEKG-KFGLTTIQILRVVRKLSQVGMLDCLQLLHFHIGSQIPSTALLSDGVAEAAQLY 179

Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243
            E       ++ I +GGG+          +    +    E+Y+    +     +    + 
Sbjct: 180 CELVRLGAHMKVIDIGGGLGIDYDGSKSGESDLSVAYSLEEYA-AAVVASVRFVCDQKSV 238

Query: 244 LNTTV 248
            +  +
Sbjct: 239 KHPVI 243


>gi|2558608|emb|CAA74609.1| ornithine decarboxylase [Plasmodium falciparum]
          Length = 253

 Score = 51.7 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 50/185 (27%), Gaps = 6/185 (3%)

Query: 36  LKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGG---ETHAYNVAYKDCEIDAVLSN 92
           +KC     +   L+        +S+ E+    +       +   +    K          
Sbjct: 6   VKCNNDEVVIKFLHGLNCNFDCASIGEISKVIKLLPNLSRDRIIFANTIKSINSLIYARK 65

Query: 93  CDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152
            +  +    +     K         + LRIN      K  ++          E+     +
Sbjct: 66  ENINLCTFDNLDVLKKIYKYHPKCSLILRINVDFKNYKSYMSSKYGANEYEWEEMLLYAK 125

Query: 153 SEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDY 209
               N+ G+ FH     K+   F   +K     F            I+LGGG     +  
Sbjct: 126 KHNLNIVGVSFHVGSNTKNLFDFCLAIKLCRDVFDMSSNMGFNFYIINLGGGYPEELEYD 185

Query: 210 PVKDF 214
             K  
Sbjct: 186 NAKKH 190


>gi|167623733|ref|YP_001674027.1| arginine decarboxylase [Shewanella halifaxensis HAW-EB4]
 gi|189046767|sp|B0TQX3|SPEA_SHEHH RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|167353755|gb|ABZ76368.1| arginine decarboxylase [Shewanella halifaxensis HAW-EB4]
          Length = 637

 Score = 51.7 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/320 (12%), Positives = 85/320 (26%), Gaps = 55/320 (17%)

Query: 1   MIKT----PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMF-DT 47
           M+K+    P  +   Q L + +++       A           L+  +K      +  + 
Sbjct: 53  MVKSGVALPVLVRFPQILHHRVNSLCQAFNQAIQKYQYENDYLLVYPIKVNQQQTVVEEI 112

Query: 48  LNQYM------DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNT 100
           L   +       G  + S  E+M          +      YKD E   +    + +    
Sbjct: 113 LASQVEKEVPQLGLEAGSKPELMAVLAMAQKASSVIICNGYKDKEYIRLALIGEKLGHKV 172

Query: 101 VSQLNKFKDKAQKLHKKIGLRINPSVS-------YSKFILADPNRPFSRLGEKCKDKIE- 152
              L K  +    L +   L + P +          K          S+ G      ++ 
Sbjct: 173 YIVLEKISELKVVLEQAKELGVTPRLGLRVRLAFQGKGKWQASGGEKSKFGLSAAQVLQV 232

Query: 153 -------SEIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGI 202
                  + + ++  L FH   +    +      +       E       ++   +GGG+
Sbjct: 233 ITSLKQENMLDSLELLHFHLGSQIANIRDIRQGVSEAGRFYCELMKLGANVKCFDVGGGL 292

Query: 203 HFTDK--------------DYPVKDFCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLN 245
                                   +    L +  ++Y   +     E G  +  +   L 
Sbjct: 293 AVDYDGTRSQSSHSMNYGLTEYANNIVSVLTDMCKEYEQPMPRIISESGRYLTAHHAVLL 352

Query: 246 TTVLDISENIKNLVIVDSSV 265
           T V+         +   +  
Sbjct: 353 TDVIGTEAYKPEDIQPPAED 372


>gi|3421210|gb|AAC68533.1| arginine decarboxylase [Thlaspi arvense]
 gi|3421214|gb|AAC68534.1| arginine decarboxylase [Eutrema salsugineum]
          Length = 403

 Score = 51.7 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/245 (13%), Positives = 74/245 (30%), Gaps = 28/245 (11%)

Query: 30  VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82
            + +  +KC     + + + ++      G  + S  E++L          E       +K
Sbjct: 1   YQGVYPVKCNQDRFIIEDIVKFGSSFRFGLEAGSKPEILLAMSCLCKGNPEAFLVCNGFK 60

Query: 83  DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134
           D E  ++            I+     +L+   D +QK++ +   GLR      +S    +
Sbjct: 61  DSEYISLALLGRKLELNTVIVLEQEEELDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGS 120

Query: 135 DPNRPFSRLGEKCKDKIESEIK--------NVNGLMFHNNCENKS---FLCFSAMLKNIE 183
                  + G      +              +  L FH   +  S        A    + 
Sbjct: 121 TSGEKG-KFGLTTIQILRVVRNLRQAGMLDCLQLLHFHIGSQIPSTALLSDGVAEAAQLY 179

Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243
            E       ++ I +GGG+          +    +    E+Y+ +  +     +    + 
Sbjct: 180 CELVRLGAHMKVIDIGGGLGIDYDGSKSGESDLSVAYTLEEYA-EAVVASVRFVCDQKSV 238

Query: 244 LNTTV 248
            +  +
Sbjct: 239 KHPVI 243


>gi|120553457|ref|YP_957808.1| arginine decarboxylase [Marinobacter aquaeolei VT8]
 gi|166220849|sp|A1TY02|SPEA_MARAV RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|120323306|gb|ABM17621.1| arginine decarboxylase [Marinobacter aquaeolei VT8]
          Length = 637

 Score = 51.3 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 79/303 (26%), Gaps = 51/303 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTL-------N 49
           P  +     L + ++                     +  +K      + + L       +
Sbjct: 61  PVLIRFTDILHDRVNKLCNAFNKVTQEQGYRGRYTAVYPIKVNQQRRVVEELLSAEPAAS 120

Query: 50  QYMDGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
               G  + S  E+M  L   K  G     N       I        L +   I+    S
Sbjct: 121 ANQVGLEAGSKPELMAVLALAKQAGSVIVCNGYKDREYIRLALIGQKLGHRVFIVVEKQS 180

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSK-FILADPNRPFSRLGEKCKDKIESEIK----- 156
           +L    ++A+KL     + +   ++        +     S+ G      ++         
Sbjct: 181 ELPLILEEAKKLGISPLIGVRARLATIGKGNWQNTGGEKSKFGLSASQVLDVVDTLKQAG 240

Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207
               +  L FH   +    +              E       I  + +GGG+    +   
Sbjct: 241 ALGTLQLLHFHLGSQIANIRDIQTGLRECARFYTELHAMGAPIGTVDIGGGLGVDYEGTR 300

Query: 208 -----------DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISE 253
                           +    L+   ++       +  E G A+  + + L T V+D   
Sbjct: 301 SRSSCSMNYSVFEYAYNVVHVLQSECDRQGIPHPDLISESGRALTAHHSVLVTNVIDREY 360

Query: 254 NIK 256
              
Sbjct: 361 PDN 363


>gi|3421184|gb|AAC68526.1| arginine decarboxylase [Barbarea vulgaris]
          Length = 405

 Score = 51.3 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/245 (13%), Positives = 73/245 (29%), Gaps = 28/245 (11%)

Query: 30  VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82
            + +  +KC     + + + ++      G  + S  E++L          E       +K
Sbjct: 1   YQGVYPVKCNQDRFIIEDIVEFGSKFRFGLEAGSKPEILLAMSCLCKGNPEAFLVCNGFK 60

Query: 83  DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134
           D E  ++            I+     +L+   D +QK++ +   GLR      +S    +
Sbjct: 61  DSEYISLALLGKKLELNTVIVLEQEEELDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGS 120

Query: 135 DPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKS---FLCFSAMLKNIE 183
                  + G      +              +  L FH   +  S        A    + 
Sbjct: 121 TSGEKG-KFGLTTIQILRVVRKLRQVGMLDCLQLLHFHIGSQIPSTALLSDGVAEAAQLY 179

Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243
            E       ++ I +GGG+          +    +    E+Y+    +     +    + 
Sbjct: 180 CELVRLGANMKVIDIGGGLGIDYDGSKSGESDLSVAYTLEEYA-AAVVASVRFVCDQKSV 238

Query: 244 LNTTV 248
            +  +
Sbjct: 239 KHPVI 243


>gi|221326406|gb|ACM17082.1| arginine decarboxylase [Solanum chilense]
          Length = 222

 Score = 51.3 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 54/171 (31%), Gaps = 24/171 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 45  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+F    +
Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVFEQEEE 164

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152
           L+   D ++K+     IGLR      +S    +       + G      + 
Sbjct: 165 LDLVIDISRKMEVQPMIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214


>gi|308062311|gb|ADO04199.1| arginine decarboxylase [Helicobacter pylori Cuz20]
          Length = 615

 Score = 51.3 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/301 (11%), Positives = 84/301 (27%), Gaps = 48/301 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL---NQYM 52
           P  +     +   + +      +A          K +  LK       +F  +       
Sbjct: 49  PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLN 108

Query: 53  DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106
            G  + S  E+++               +KD E+         + +  T+    +++L  
Sbjct: 109 YGLEAGSKSELIIAMSYTNPTAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168

Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155
               A++       +I       S    + A      S+ G    + +E+          
Sbjct: 169 IIAVAKQNEFLACPKIGIRIRLHSTGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228

Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
           ++ + + FH   +                   +        +  +++GGG+      +  
Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288

Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                                + +  ++    I++E G  I  N   L   VL++  +  
Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348

Query: 257 N 257
           N
Sbjct: 349 N 349



 Score = 40.5 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%)

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284
           +L   +A+       +  +L I E ++   +++ S    +PDY   +++  + P      
Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474

Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337
               +A +   +C +            F   + + +    ++F  V  Y        N  
Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDVDEEEYFLAFFLVGAYQEVLGMKHNLF 534

Query: 338 NMPTI--AVKNVDGTIKA 353
             PT    V +  G  + 
Sbjct: 535 THPTEFSVVFDEKGDYEV 552


>gi|221326370|gb|ACM17064.1| arginine decarboxylase [Solanum chmielewskii]
          Length = 222

 Score = 51.3 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 45  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152
           L+   D ++K+     IGLR      +S    +       + G      + 
Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGGKG-KFGLTTTQILR 214


>gi|109947192|ref|YP_664420.1| arginine decarboxylase [Helicobacter acinonychis str. Sheeba]
 gi|109714413|emb|CAJ99421.1| arginine decarboxylase [Helicobacter acinonychis str. Sheeba]
          Length = 615

 Score = 51.3 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/314 (11%), Positives = 88/314 (28%), Gaps = 48/314 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL---NQYM 52
           P  +     +   + +       A          K +  LK       +   +       
Sbjct: 49  PLLVRFPHLVQKQIKSLFDAFSLAIKEYQYSGAFKAVFPLKVNQMPSFVLPLVQGAKGLN 108

Query: 53  DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106
            G  + S  E+++       +T      +KD E+         + +  T+    +++L  
Sbjct: 109 YGLEAGSKSELIIAMSYTNPKTPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168

Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155
               A++    I  +I       S    + A      S+ G    + +E+          
Sbjct: 169 IIAVAKQNEFLICPKIGIRIRLHSTGIGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228

Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
           ++ + + FH   +                   +        +  +++GGG+      +  
Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288

Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                                + +  ++    I++E G  I  N   L   VL++  +  
Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348

Query: 257 NLVIVDSSVEAHVP 270
           N   +      + P
Sbjct: 349 NEKSLKIKESDNPP 362



 Score = 40.1 bits (92), Expect = 0.52,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%)

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284
           +L   +A+       +  +L I E ++   +++ S    +PDY   ++S  + P      
Sbjct: 415 HLIVKKAVQLLYFKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQSFPVMPLNKLDE 474

Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337
               +A +   +C +            F   + + +    ++F  V  Y        N  
Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDVDEEEYFLAFFLVGAYQEVLGMKHNLF 534

Query: 338 NMPTI--AVKNVDGTIKA 353
             PT    V +  G  + 
Sbjct: 535 THPTEFSVVFDEKGDYEV 552


>gi|317178664|dbj|BAJ56452.1| arginine decarboxylase [Helicobacter pylori F30]
          Length = 615

 Score = 51.3 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/301 (11%), Positives = 84/301 (27%), Gaps = 48/301 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL---NQYM 52
           P  +     +   + +      +A          K +  LK       +F  +       
Sbjct: 49  PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLN 108

Query: 53  DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106
            G  + S  E+++               +KD E+         + +  T+    +++L  
Sbjct: 109 YGLEAGSKSELIIAMSYTNPTAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168

Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155
               A++       +I       S    + A      S+ G    + +E+          
Sbjct: 169 IIAVAKQNEFLACPKIGIRIRLHSTGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228

Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
           ++ + + FH   +                   +        +  +++GGG+      +  
Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288

Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                                + +  ++    I++E G  I  N   L   VL++  +  
Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348

Query: 257 N 257
           N
Sbjct: 349 N 349



 Score = 40.1 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%)

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284
           +L   +A+       +  +L I E ++   +++ S    +PDY   +++  + P      
Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474

Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337
               +A +   +C +            F   + I +    ++F  V  Y        N  
Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDIDEEEYFLAFFLVGAYQEVLGMKHNLF 534

Query: 338 NMPTI--AVKNVDGTIKA 353
             PT    V +  G  + 
Sbjct: 535 THPTEFSVVFDEKGDYEV 552


>gi|308063817|gb|ADO05704.1| arginine decarboxylase [Helicobacter pylori Sat464]
          Length = 615

 Score = 51.3 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/301 (11%), Positives = 84/301 (27%), Gaps = 48/301 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTL---NQYM 52
           P  +     +   + +      +A          K +  LK       +F  +       
Sbjct: 49  PLLVRFPHLVQKQIKSLFDAFSSAIKEYQYSGAFKAVFPLKVNQMPSFVFPLVQGAKGLN 108

Query: 53  DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNK 106
            G  + S  E+++               +KD E+         + +  T+    +++L  
Sbjct: 109 YGLEAGSKSELIIAMSYTNPTAPITVNGFKDKEMIELGFIAKSMQHEITLTIEGLNELKT 168

Query: 107 FKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155
               A++       +I       S    + A      S+ G    + +E+          
Sbjct: 169 IIAVAKQNEFLACPKIGIRIRLHSTGTGVWAKSGGINSKFGLSSTEVLEAMRLLEENDLL 228

Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
           ++ + + FH   +                   +        +  +++GGG+      +  
Sbjct: 229 EHFHMIHFHIGSQISDISPLKKALREAGNLYAELRKMGAKNLNSVNIGGGLAVEYTQHKH 288

Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                                + +  ++    I++E G  I  N   L   VL++  +  
Sbjct: 289 HQDKNYTLEEFSADVVFLLREIVKNKQEIEPDIFIESGRYISANHAVLVAPVLELFSHEY 348

Query: 257 N 257
           N
Sbjct: 349 N 349



 Score = 40.5 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%)

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYP-----N 284
           +L   +A+       +  +L I E ++   +++ S    +PDY   +++  + P      
Sbjct: 415 HLIVKKAVQLLYVKDHNDILRIQEQVQERYLLNCSFFQSLPDYWGLRQNFPVMPLNKLDE 474

Query: 285 TGPYTAMVCGRSCLAGDIFGEFH----FEKPVKIGD---RISFEDVAGYNINRKNWFNGI 337
               +A +   +C +            F   + + +    ++F  V  Y        N  
Sbjct: 475 KPTRSASLWDITCDSDGEIAFDSTKPLFLHDIDVDEEEYFLAFFLVGAYQEVLGMKHNLF 534

Query: 338 NMPTI--AVKNVDGTIKA 353
             PT    V +  G  + 
Sbjct: 535 THPTEFSVVFDEKGDYEV 552


>gi|3421218|gb|AAC68535.1| arginine decarboxylase [Nasturtium officinale]
          Length = 405

 Score = 51.3 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/245 (13%), Positives = 73/245 (29%), Gaps = 28/245 (11%)

Query: 30  VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82
            + +  +KC     + + + ++      G  + S  E++L          E       +K
Sbjct: 1   YQGVYPVKCNQDRFIIEDIVEFGSKFRFGLEAGSKPEILLAMSCLCKGNPEAFLVCNGFK 60

Query: 83  DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134
           D E  ++            I+     +L+   D +QK++ +   GLR      +S    +
Sbjct: 61  DSEYISLALLGKKLELNTVIVLEQEEELDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGS 120

Query: 135 DPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKS---FLCFSAMLKNIE 183
                  + G      +              +  L FH   +  S        A    + 
Sbjct: 121 TSGEKG-KFGLTTIQILRVVRKLRQVGMLDCLQLLHFHIGSQIPSTALLSDGVAEAAQLY 179

Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243
            E       ++ I +GGG+          +    +    E+Y+    +     +    + 
Sbjct: 180 CELVRLGANMKVIEIGGGLGIDYDGSKSGESDLSVAYTLEEYA-AAVVASVRFVCDQKSV 238

Query: 244 LNTTV 248
            +  +
Sbjct: 239 KHPVI 243


>gi|225011270|ref|ZP_03701727.1| Orn/DAP/Arg decarboxylase 2 [Flavobacteria bacterium MS024-3C]
 gi|225004580|gb|EEG42545.1| Orn/DAP/Arg decarboxylase 2 [Flavobacteria bacterium MS024-3C]
          Length = 466

 Score = 51.3 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 48/410 (11%), Positives = 104/410 (25%), Gaps = 77/410 (18%)

Query: 3   KTPY-YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCF---------------AAWGMFD 46
            TP  +     K+  N+  A     N       A+K                     + +
Sbjct: 42  GTPLKFTY-LPKISENIQHAKGWFDN-------AIKKNDYKGKYYYCYCTKSAHFKHVLE 93

Query: 47  TLNQYMDGTTSSSLYEVMLG---HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQ 103
                     +SS +++ +     E    +   + +         V +    I     + 
Sbjct: 94  EALSNDIHIETSSAFDINIVESLKEAGKIKPDTFVICNGFKRAQYVDNIARLINSGHENC 153

Query: 104 ------LNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF----SRLGEKCKDKIES 153
                   +    ++K+     + I  +           +R      + +         +
Sbjct: 154 IPIIDNYEEISLLSEKIDGDYKIGIRIASEEEPKFEFYTSRLGIGYRNIVPFYEDQIKGN 213

Query: 154 EIKNVNGLMFHNNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIH------- 203
           +   +  L F  N        +   L                ++ +++GGG         
Sbjct: 214 DKVELKMLHFFINTGIGDNAYYWNELSKCLKVYVRLKKICPSLDSLNIGGGFPIKNSLAF 273

Query: 204 ---FTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN--L 258
              +      + +    +   ++     I+ E G   V  +      VL   +       
Sbjct: 274 EYDYAYMIEEILNQINAICAEADVPVPHIFTEFGSFTVGESGGAIYQVLYQKQQNDREKW 333

Query: 259 VIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFE----- 309
            ++DSS    +PD     +                 ++ G +C + D +           
Sbjct: 334 NMIDSSFITTLPDTWAINKRFIMLPINRWQDEYERVLLGGLTCDSDDYYNSEQNMNAIYL 393

Query: 310 ------KPVKIGDRISFEDVAGYNINRKNWFNG-----INMPTIAVKNVD 348
                 KP+ IG    F +   Y  +    F G     I  P   +   D
Sbjct: 394 PVFKKEKPLYIG----FFNTGAYQESIG-GFGGLQHCLIPTPKHVLIQKD 438


>gi|332532495|ref|ZP_08408373.1| biosynthetic arginine decarboxylase [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332038138|gb|EGI74585.1| biosynthetic arginine decarboxylase [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 637

 Score = 51.3 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 84/304 (27%), Gaps = 53/304 (17%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +   Q L + + +       A           L+  +K      + + +        
Sbjct: 62  PALVRFPQILHHRVHSLCGAFNTAIENYGYPKDYLLVYPIKVNQQREVVEEIVASQAQVE 121

Query: 54  ----GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
               G  + S  E++  L   +        N       +        L +   I+   +S
Sbjct: 122 KKQLGLEAGSKPELLTVLALAEKTSAVIVCNGYKDKEYVRLALIGEKLGHKVYIVLEKLS 181

Query: 103 QLNKFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNG- 160
           +L+    +A++L+ K  + I     S  K          S+ G      +   +  + G 
Sbjct: 182 ELDMVLSQAKELNVKPRIGIRVRLASQGKGKWQASGGEKSKFGLSASQVLH-VVNRLKGA 240

Query: 161 --------LMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK-- 207
                   + FH   +    +      +       E      +I+ + +GGG+       
Sbjct: 241 NQLDLLQLVHFHLGSQMANIRDVRLGVSEAARFYCELRKLGAEIDCLDVGGGLAVDYDGT 300

Query: 208 --------DYPVKDFCQRLKEFSEKYSVQI-------YLEPGEAIVTNTTTLNTTVLDIS 252
                   +Y + ++   +         Q          E G A+  +   L + V+   
Sbjct: 301 RSQSHNSMNYSLAEYANNIVYTIGDTCKQYEQPMPTIISESGRALTAHHAVLISNVIGTE 360

Query: 253 ENIK 256
               
Sbjct: 361 SYTP 364


>gi|224372415|ref|YP_002606787.1| arginine decarboxylase [Nautilia profundicola AmH]
 gi|223588493|gb|ACM92229.1| arginine decarboxylase [Nautilia profundicola AmH]
          Length = 608

 Score = 51.3 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/291 (13%), Positives = 82/291 (28%), Gaps = 49/291 (16%)

Query: 14  LLNNLDTALYIRKNA--------GVKLLLALKCFAAW----GMFDTLNQYMDGTTSSSLY 61
           +   +++       A          + +  LK          +    N+Y  G  + S  
Sbjct: 54  IRKQINSLYTSFNKAIKDFDYKGKFQAVFPLKVNQFPTFLKPLIKIANRYNYGLEAGSKA 113

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK---------AQ 112
           E++L               +KD ++  +      + +N    +    +            
Sbjct: 114 ELILAMAYNNKTAPITINGFKDKDMIRLAFIAGFMGYNVTITIEGLNELKSIIEVSGEYH 173

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFH 164
           K+   IG+RI    S    I A      S+ G    + IE+            +  + FH
Sbjct: 174 KMPVNIGIRIRLHTSGVG-IWAKSGGIESKFGLSSTEIIEAIEILKQHNMLDKLKMIHFH 232

Query: 165 NNCENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDY----------- 209
              +          ++     +          +  I++GGG+      +           
Sbjct: 233 IGSQINDISPLKKAIRESGNIYADLRKLGAKNLSAINIGGGLAIEYSQWEEKRDKNYSIE 292

Query: 210 ----PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                V    + +    +     I+ E G  I + +T L   V+++     
Sbjct: 293 EFSNDVVYLLKEISNKKQVPMPDIFTESGRFIASPSTILIAPVIELFSQEY 343


>gi|221195320|ref|ZP_03568376.1| alanine racemase domain protein [Atopobium rimae ATCC 49626]
 gi|221185223|gb|EEE17614.1| alanine racemase domain protein [Atopobium rimae ATCC 49626]
          Length = 386

 Score = 51.3 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/322 (11%), Positives = 87/322 (27%), Gaps = 10/322 (3%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA-AWGMFDTLNQYM-DGTTSSSLYEVM 64
           Y++D   L+ N            ++L   LK       +  TL++    G       E  
Sbjct: 31  YIVDLDSLIENAQKLKKKANEKNIQLYFMLKQLGRNPLIAQTLDELGYAGAVCVDYREAT 90

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVL--SNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
              E      H  N+     +    +     + +   +  +  +  + A++L     + +
Sbjct: 91  TLGENGVRLGHVGNLVQIPLQSIERILTYRPEIVTVFSREEAKRIGEVAERLGFVQSIML 150

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKD-KIESEIKNVNGLM-FHNNCENKSFLCFSAMLK 180
               +            +    E+ +    ++   ++ G+  F     +        +  
Sbjct: 151 KVLDTEDVQYSGQSGGFYVDELEQVEQEIAKTSGVHIAGVCSFPCFLFSDQTNRIETLHN 210

Query: 181 N-IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
               ++   ++  + + +L   +        V    Q      E         P  A   
Sbjct: 211 VSTVQKACEYLHSVGYDNLQVNLPSQSCTALVDRVSQLQGTHMEPGHGLTGTTPYHAAGN 270

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLA 299
           +     T+ + +SE   NL                   +          T  V   +  +
Sbjct: 271 DMD-EKTSYVYVSEISHNLGSNSYCYGGGFYRRGHLHRALVGKREDSAKTCEVNAPTPES 329

Query: 300 GDIFGEFHFEKPVKIGDRISFE 321
            D + E    +   +GD +   
Sbjct: 330 IDYYFELS--QNATVGDTVLMC 349


>gi|313673051|ref|YP_004051162.1| arginine decarboxylase [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939807|gb|ADR18999.1| arginine decarboxylase [Calditerrivibrio nitroreducens DSM 19672]
          Length = 615

 Score = 51.3 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/302 (14%), Positives = 82/302 (27%), Gaps = 49/302 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTLNQ-YMD- 53
           P  +     +   +D      K +        G   L  LK       +   +       
Sbjct: 46  PLLIRFPHLIKEQIDLLFKAFKKSMKEYGYQGGFNALFPLKVNQFPNFVIPLMEMTKGIP 105

Query: 54  -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNK 106
            G  + S  E+++        +      +KD E+       A + +  T+    +++L  
Sbjct: 106 YGLEAGSKPELIIAMAYNNPGSPIMVNGFKDKEMISLGFIAAKMGHDITLTIEGLNELET 165

Query: 107 FKDKAQKLHKKI---GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------- 156
               A+++ K     GLRI    S    I A      S+ G    + IE+          
Sbjct: 166 ILTVAKEMGKPYPKIGLRIRLHSSGIG-IWAKSGGINSKFGLTSSELIEAMNMLKNSNML 224

Query: 157 -NVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
                + FH   +                   + +      ++ I LGGG+      +  
Sbjct: 225 EYFTMIHFHIGSQISEISPLKKALREAGNIHAELYKMGAHNLKSIDLGGGLAVEYAQHDG 284

Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                                +          IYLE G  +      L   VL++     
Sbjct: 285 LSQRHYTLEEYASDVVFLLKTIAHNKHVPDPDIYLEAGRFVAAKHAVLVAPVLELFSQEY 344

Query: 257 NL 258
           + 
Sbjct: 345 DQ 346


>gi|260773926|ref|ZP_05882841.1| biosynthetic arginine decarboxylase [Vibrio metschnikovii CIP
           69.14]
 gi|260610887|gb|EEX36091.1| biosynthetic arginine decarboxylase [Vibrio metschnikovii CIP
           69.14]
          Length = 636

 Score = 51.3 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 79/303 (26%), Gaps = 51/303 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQY- 51
           P  +   Q L   +         A           L+  +K      + D +     +  
Sbjct: 61  PVLVRFPQILHQRVHNICDAFNQAIEECDYPNKYLLVYPIKVNQQKEVVDEILASQAELE 120

Query: 52  --MDGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
               G  + S  E++  L   +        N       I        L +   I+   +S
Sbjct: 121 TKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 180

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK----- 156
           +L+    +A+ L  K  L +   ++         +     + G      +    +     
Sbjct: 181 ELDLILKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVVERLRAEN 240

Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207
               +  + FH   +    +              E      QI++  +GGG+        
Sbjct: 241 QLEALQLVHFHLGSQMANIRDVRNGVNEAARFYCELRELGAQIDYFDVGGGLAIDYDGTR 300

Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQ---IYLEPGEAIVTNTTTLNTTVLDISE 253
                          ++    + +    Y      I  E G +I  +   L T V+    
Sbjct: 301 SQSSNSMNYGLQEYARNIVNVVADMCNLYEQPKPIIISESGRSITAHHAVLITNVIGTEA 360

Query: 254 NIK 256
            + 
Sbjct: 361 YMP 363


>gi|238501228|ref|XP_002381848.1| ornithine decarboxylase, putative [Aspergillus flavus NRRL3357]
 gi|220692085|gb|EED48432.1| ornithine decarboxylase, putative [Aspergillus flavus NRRL3357]
          Length = 155

 Score = 51.3 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 38/106 (35%), Gaps = 2/106 (1%)

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPN 284
           Y+    +      +       + +L +++ I    +   +        L  QE+ +    
Sbjct: 32  YTAACKVVARRKQIGQDKLSQSDMLYLNDGIYGCFMNAVAENEIYRPILFKQETTSSTER 91

Query: 285 T-GPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNI 328
             G +   V G +C   D   +       VK+GD + FE++ G+  
Sbjct: 92  EAGEHRYSVWGPTCDGLDCIAKEATMGCEVKVGDWVKFENMGGFTA 137


>gi|212635804|ref|YP_002312329.1| arginine decarboxylase [Shewanella piezotolerans WP3]
 gi|226734333|sp|B8CR70|SPEA_SHEPW RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|212557288|gb|ACJ29742.1| Arginine decarboxylase [Shewanella piezotolerans WP3]
          Length = 637

 Score = 50.9 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/326 (11%), Positives = 91/326 (27%), Gaps = 51/326 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMF-DTLNQYM--- 52
           P  +   Q L + +++               A   L+  +K      +  + L   +   
Sbjct: 61  PVLVRFPQILHHRVNSLCQAFNQAIQKYKYEADYLLVYPIKVNQQQTVVEEILASQVEKE 120

Query: 53  ---DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEID------AVLSNCDTIIFNTVS 102
               G  + S  E++          +      YKD E          L +   I+   +S
Sbjct: 121 VPQLGLEAGSKPELLAVLAMAQKASSVIICNGYKDKEYIRLALIGEKLGHKVYIVLEKMS 180

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153
           +L    ++A++L     L +   +++        +     + G      +        E 
Sbjct: 181 ELKVVLEQAKELGVTPRLGLRVRLAFQGKGKWQASGGEKSKFGLSAAQVLKVIELLQHEE 240

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207
            + ++  L FH   +    +      +       E      Q++   +GGG+        
Sbjct: 241 MLDSLELLHFHLGSQIANIRDIRQGVSEAGRFYCELMKLGAQVKCFDVGGGLAVDYDGTR 300

Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISE 253
                           +    L +  ++Y   +     E G  +  +   L T V+    
Sbjct: 301 SQSNNSMNYGLTEYANNIVSVLTDMCKEYEQPMPRIISESGRYLTAHHAVLLTDVIGTES 360

Query: 254 NIKNLVIVDSSVEAHVPDYLLYQESA 279
                ++  S     +   +    + 
Sbjct: 361 YKPETILPPSEDAPLLLQNMWQSWTE 386


>gi|254458054|ref|ZP_05071481.1| arginine decarboxylase [Campylobacterales bacterium GD 1]
 gi|207085447|gb|EDZ62732.1| arginine decarboxylase [Campylobacterales bacterium GD 1]
          Length = 609

 Score = 50.9 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 81/292 (27%), Gaps = 49/292 (16%)

Query: 14  LLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLN----QYMDGTTSSSLY 61
           +   + T       A            +  LK          +     ++  G  + S  
Sbjct: 55  IKKQITTLYSYFDKAIRYNNYQGNFHAVFPLKVNQYPHAVKAIAEQGREFGYGLEAGSKA 114

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEI------DAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           E++L   +           +KD E+       A   +  T+    + +L    + A + +
Sbjct: 115 ELILAMSQTTHGAPITVNGFKDKEMMTLGFIAAQSGHNITLTIEGLGELETIIEVANECN 174

Query: 116 ---KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFH 164
                IG+R+    S    I A      ++ G    + IE+           N   + FH
Sbjct: 175 LKVPNIGIRVRL-HSAGTGIWAKSGGMDAKFGLTSTEIIEAITLLRNENMLDNFTMIHFH 233

Query: 165 NNCENKSFLCFSAMLKNIEKEFGHFIT----QIEWISLGGGIHFTDKDYPVKDFCQR--- 217
              + +        L+     +          +  I++GGG+      +           
Sbjct: 234 IGSQMEDIAPLKRALREAGNIYAELKKMGANSLNSINIGGGLAVEYDQHTHSKSRNYSVD 293

Query: 218 ------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN 257
                       +          IY E G  IV +   L T VL++      
Sbjct: 294 EFSSSVVFLIGEIMNAKNVSHPDIYTESGRFIVASHAVLITPVLELFTQDYQ 345



 Score = 41.3 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 42/141 (29%), Gaps = 13/141 (9%)

Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY 288
           ++    +A+           + +   ++   ++++S+   +PDY    +   + P     
Sbjct: 409 VHSIIKKALYLTNAYSTNEFVQLQVRLQERYLINASIFQSLPDYWGLDQHFPVMPLHHLD 468

Query: 289 TAMV-----CGRSCLAGDIFGEFHFEK------PVKIGDR-ISFEDVAGYNINRKNWFNG 336
              +        +C +    G    +        +   D  + F +V  Y        N 
Sbjct: 469 VVPLRAASLWDITCDSDGEIGFNPEKPLYLHDVNLDEEDYFLGFFNVGAYQETLGMNHNL 528

Query: 337 INMPTIAVKN-VDGTIKAIRE 356
              P     N  D +   I E
Sbjct: 529 FTHPNEYTVNIDDTSYNIINE 549


>gi|297526616|ref|YP_003668640.1| Orn/DAP/Arg decarboxylase 2 [Staphylothermus hellenicus DSM 12710]
 gi|297255532|gb|ADI31741.1| Orn/DAP/Arg decarboxylase 2 [Staphylothermus hellenicus DSM 12710]
          Length = 589

 Score = 50.9 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/281 (13%), Positives = 82/281 (29%), Gaps = 34/281 (12%)

Query: 18  LDTALYIRKNAG----VKLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLGHEK 69
            +  +   +  G     K +  LK  +   + DT+ QY      G  + +  E+ L  + 
Sbjct: 70  YEAFMEAFRKFGYEGEFKPVYPLKSNSTTIVVDTIWQYGVKYNWGFNAGTYPEIKLLSKY 129

Query: 70  FGGETH-----AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
              +                 +  +  N + I+     +      K + L+  + +++  
Sbjct: 130 TNKKPRLLVVDGIKDNKILDLLVKMNDNWEIIVDIESMRDADLLSKYRDLNIGLRIKVVS 189

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNG----LMFHNNCENKSFLCFSAMLK 180
             S      +  +  F  L     + I+     + G    L  H   +         +++
Sbjct: 190 KSSGLWSHSSGLDSKFGLLINTLDEIIKE-HPWIPGRTVLLHVHAGSQITDKNKLENIIR 248

Query: 181 NIEKEFGH----FITQIEWISLGGGIHFTD---------KDYPVKDFCQRLKEFS---EK 224
                +          I +I  GGG+ +            +Y + ++ + L +      +
Sbjct: 249 ETITLYNSLVNTGFKNIRYIDFGGGLAYPYVEASDHMFSSNYSLNEYAEILVKEVVESAE 308

Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSV 265
               I  E G  IV       T ++D            S  
Sbjct: 309 NIPGIVFEGGRYIVAPHRITVTKIIDTRPYSTPEDDETSYP 349


>gi|146300561|ref|YP_001195152.1| Orn/DAP/Arg decarboxylase 2 [Flavobacterium johnsoniae UW101]
 gi|146154979|gb|ABQ05833.1| Orn/DAP/Arg decarboxylase 2 [Flavobacterium johnsoniae UW101]
          Length = 467

 Score = 50.9 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 52/408 (12%), Positives = 109/408 (26%), Gaps = 63/408 (15%)

Query: 3   KTPY-YLIDKQKLLNNLDT----ALYIRKNAGVKL----LLALKCFAAWGMFDTLNQYMD 53
            TP  +     ++  N++          +    +         K      + +   +   
Sbjct: 42  GTPLKFTY-LPQISENINKAKSWFRKAMEKNKYEAKYYYCYCTKSSHFEYIMNEAFKNNI 100

Query: 54  GTTSSSLYEVMLG---HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK 110
              +SS ++V +     E        Y +       + + +    I     + +    + 
Sbjct: 101 HIETSSAFDVNIVENLLENGKINKSTYVICNGFKRDEYISNIARLINNGHKNTIPIIDNY 160

Query: 111 A--------QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKC--KDKIESEIKNVNG 160
                     K   KIG+RI                   +       K   E++   +  
Sbjct: 161 EELDLLQGEIKGKFKIGIRIAAEEEPKFEFYTSRLGIGYKNIVSFYKKQIQENDKLELKM 220

Query: 161 LMFHNNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTDK---DYPVKDF 214
           L F  N        +   L                ++ +++GGG    +    +Y  +  
Sbjct: 221 LHFFINTGINDTSYYWNELVKCIKVYIALKKECPTLDGLNIGGGFPIKNSLAFEYDYQYM 280

Query: 215 CQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSV 265
              +    +            I+ E G   V  +      +L   +        ++DSS 
Sbjct: 281 IDEIINQIKIACEEAEVDVPNIFTEFGSFTVGESGGAIYQILYQKQQNDREKWNMIDSSF 340

Query: 266 EAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDI-----------FGEFHFEK 310
              +PD     +     A    N      ++ G +C + D              +++ EK
Sbjct: 341 ITTLPDTWAINKRFIMLAINRWNDTYERVLLGGLTCDSDDYYNSEQNMNAIYLPKYNKEK 400

Query: 311 PVKIGDRISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDGTIKA 353
           P+ IG    F +   Y       + G     I  P   + + D     
Sbjct: 401 PLYIG----FFNTGAYQETIG-GYGGLHHCLIPQPKHILIDRDENGIL 443


>gi|3421194|gb|AAC68529.1| arginine decarboxylase [Capsella bursa-pastoris]
          Length = 405

 Score = 50.9 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/245 (12%), Positives = 73/245 (29%), Gaps = 28/245 (11%)

Query: 30  VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82
            + +  +KC     + + + ++      G  + S  E++L          +       +K
Sbjct: 1   YQGVYPVKCNQDRFIIEDIVEFGSSFRFGLEAGSKPEILLAMSCLCKGNPDAFLVCNGFK 60

Query: 83  DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134
           D E  ++            I+     +L+   D +QK++ +   GLR      +S    +
Sbjct: 61  DSEYISLALFGRKLELNTVIVLEQEEELDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGS 120

Query: 135 DPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKS---FLCFSAMLKNIE 183
                  + G      +              +  L FH   +  S        A    + 
Sbjct: 121 TSGEKG-KFGLTTIQILRVVRKLRQVGMLDCLQLLHFHIGSQIPSTALLSDGVAEAAQLY 179

Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243
            E       ++ I +GGG+          +    +    E+Y+    +     +    + 
Sbjct: 180 CELVRLGAHMKVIDIGGGLGIDYDGSKSGESDLSVAYSLEEYA-AAVVASVRFVCDQKSV 238

Query: 244 LNTTV 248
            +  +
Sbjct: 239 KHPVI 243


>gi|262340848|ref|YP_003283703.1| arginine decarboxylase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
 gi|262272185|gb|ACY40093.1| arginine decarboxylase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
          Length = 463

 Score = 50.9 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 68/243 (27%), Gaps = 40/243 (16%)

Query: 147 CKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIH 203
                 +    +  L F  N   K    +   L      +        +++ +++GGG  
Sbjct: 207 LNKIKNNPKVELKMLHFFINTGIKDTAYYWNELFKCLHIYAGLKKIAPELDILNIGGGFP 266

Query: 204 FTDKD---YPVKDFCQRLKEFSEKYSV-------QIYLEPGEAIVTNTTTLNTTVLD--I 251
                   Y  +     +    +K+          IY E G   V  +  +   +L    
Sbjct: 267 IKTSMSFNYDYEYMANEIVYQIKKFCQEENVSDPHIYTEFGAYTVGESGGILYKILSQKR 326

Query: 252 SENIKNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFH 307
             + +   ++DSS    +PD           A    N       + G +C + D +    
Sbjct: 327 QNDREKWNMIDSSFMTTLPDTWAISRRFIMMAINRWNDCYERVFLGGLTCDSDDYYNSEQ 386

Query: 308 FEK-----------PVKIGDRISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDGTI 351
                         P+ IG    F +   Y     + + G     I  P   + N D   
Sbjct: 387 HMNAIYLPCFRKKTPLYIG----FFNTGAYQDTI-SGYGGVHHCLIPQPIHVLINHDEKN 441

Query: 352 KAI 354
             +
Sbjct: 442 NLV 444


>gi|302339741|ref|YP_003804947.1| arginine decarboxylase [Spirochaeta smaragdinae DSM 11293]
 gi|301636926|gb|ADK82353.1| arginine decarboxylase [Spirochaeta smaragdinae DSM 11293]
          Length = 639

 Score = 50.9 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/300 (12%), Positives = 83/300 (27%), Gaps = 48/300 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM---- 52
           P  L     L   + T                  + +  +K      + + + ++     
Sbjct: 67  PVLLRFPDILGERIRTLNESFAKTMKQYEYRGAYRGVFPIKVNQQQQVIEEVVRFGGAYH 126

Query: 53  DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLN 105
            G  + S  E+++        ET      YKD E          +     ++     +++
Sbjct: 127 HGLEAGSKPELLIALGMVRDPETPIICNGYKDEEFVDLALYGVKMGLQVILVIEQPGEIS 186

Query: 106 KFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEIK-------- 156
               +++KL  +  L +     S      A+     S  G      +++  +        
Sbjct: 187 TIIRRSKKLGIEPTLGLRVKLSSTVGGKWAESAGDHSVFGLTAGQLVDAIEELSRADMLG 246

Query: 157 NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------ 207
            +  L +H   +    +                 H    + ++ +GGG+           
Sbjct: 247 TLRLLHYHLGSQIPNIRDIRSAVHEASRYYTALVHEGAPMGYLDIGGGLGVDYDGSRTTF 306

Query: 208 --------DYPVKDFCQRLKEFSEK---YSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                   D    D    +K   ++       +  E G A V   + L   +LD++    
Sbjct: 307 VSSKNYSLDEYCSDVVDVIKMVMDEAGVEHPTVVTESGRATVAYYSVLLFNILDVNSLHD 366


>gi|254508082|ref|ZP_05120209.1| arginine decarboxylase [Vibrio parahaemolyticus 16]
 gi|219549049|gb|EED26047.1| arginine decarboxylase [Vibrio parahaemolyticus 16]
          Length = 636

 Score = 50.9 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/270 (11%), Positives = 71/270 (26%), Gaps = 35/270 (12%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +   Q L   +         A           L+  +K      + D + +      
Sbjct: 61  PVLVRFPQILHQRVHGICDAFNQAIDEYQYTNNYLLVYPIKVNQQKEVVDEILESQAQLE 120

Query: 54  ----GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
               G  + S  E++  L   +        N       +        L +   I+   +S
Sbjct: 121 TKQLGLEAGSKPELLAVLALAQKASSVIVCNGYKDREYVRLALIGEKLGHKVFIVLEKLS 180

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153
           +L+    +A+ L  K  + I   ++         +     + G      +        E 
Sbjct: 181 ELDLVLKEAKSLGVKPRMGIRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVIDRLREED 240

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
           ++  +  + FH   +    +              E       I++  +GGG+        
Sbjct: 241 QLDALQLVHFHLGSQMANIRDIRNGVNESARFYCELRGMGADIQFFDIGGGLAVDYDG-T 299

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
                  +     +Y+  I    G+     
Sbjct: 300 RSQSSNSMNYGLIEYARNIVSTVGDVCQQY 329


>gi|221326500|gb|ACM17129.1| arginine decarboxylase [Solanum pennellii]
 gi|221326502|gb|ACM17130.1| arginine decarboxylase [Solanum pennellii]
          Length = 222

 Score = 50.9 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 45  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLAFVARKLQLNTVIVLEQEEE 164

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152
           L+   D ++K+     IGLR      +S    +       + G      + 
Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214


>gi|269837390|ref|YP_003319618.1| alanine racemase domain-containing protein [Sphaerobacter
           thermophilus DSM 20745]
 gi|269786653|gb|ACZ38796.1| alanine racemase domain protein [Sphaerobacter thermophilus DSM
           20745]
          Length = 366

 Score = 50.9 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 33/97 (34%), Gaps = 2/97 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           + TP  ++ +  L  N++      +  GV +   LK      +     +    G T + L
Sbjct: 7   LDTPCLVVHESILRRNVEEMAAFAREHGVAMRPHLKTHKTAEITRMQREAGAIGFTCAKL 66

Query: 61  YEVM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTI 96
            E   L       +         + +I  +L+  D I
Sbjct: 67  GEAEALADAGVLDDVLLAYQIVGEQKIRRLLALMDRI 103


>gi|63002634|dbj|BAD97829.1| arginine decarboxylase [Prunus persica]
          Length = 404

 Score = 50.9 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 60/203 (29%), Gaps = 25/203 (12%)

Query: 30  VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82
            + +  +KC     + + + ++      G  + S  E++L          E       +K
Sbjct: 1   YQGVYPVKCNQDRFVVEDIVRFGSPFRFGLEAGSKPELLLAMSCLCKGNPEALLICNGFK 60

Query: 83  DCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF-- 140
           D E  ++      +  NTV  L + ++    +     L + P +     +    +  F  
Sbjct: 61  DFEYISLALFARKLALNTVIVLEQEEELDVVIDLSKKLGVRPVIGARAKLKTKHSGHFGS 120

Query: 141 -----SRLGEKCKDKIESEI--------KNVNGLMFHNNCENKS---FLCFSAMLKNIEK 184
                 + G      +                 L FH   +  S        +    I  
Sbjct: 121 TSGEKGKFGLTTTQILRVVKKLDQLGLLDCFQLLHFHIGSQIPSTALLADGVSEAAQIYC 180

Query: 185 EFGHFITQIEWISLGGGIHFTDK 207
           E       +++I +GGG+     
Sbjct: 181 ELVRLGAHMKFIDIGGGLGIDYD 203


>gi|213962635|ref|ZP_03390896.1| arginine decarboxylase [Capnocytophaga sputigena Capno]
 gi|213954630|gb|EEB65951.1| arginine decarboxylase [Capnocytophaga sputigena Capno]
          Length = 463

 Score = 50.9 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/236 (12%), Positives = 66/236 (27%), Gaps = 38/236 (16%)

Query: 148 KDKIESEIKNVNGLMFHNNCENK---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHF 204
           ++  ++    +  L F  N   K    +         +  +      +++ +++GGG   
Sbjct: 208 REIKDNPKVRLKMLHFFINTGIKDNAYYWNELLKCLRVYIQLKKVAPELDSLNIGGGFPI 267

Query: 205 TDK---DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISEN 254
                 +Y        +    +            I+ E G   V         ++   + 
Sbjct: 268 KSSLAFEYDYAYMVDEIIRQIKITCDQEKVPVPNIFTEFGSFTVGEAGGAIYEIMYQKQQ 327

Query: 255 IKN--LVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDI------ 302
                  +++SS    +PD     +          N      ++ G +C   D       
Sbjct: 328 NDREKWNMINSSFITTLPDSWAINKRFVLLPINRWNDEYERVLLGGLTCDGDDYYNSEQN 387

Query: 303 -----FGEFHFEKPVKIGDRISFEDVAGY----NINRKNWFNGINMPTIAVKNVDG 349
                  +++  KP+ IG    F +   Y              I  P I + + D 
Sbjct: 388 MNAIYLPKYNKNKPLYIG----FFNTGAYQDSIGGVGGLQHCLIPQPKIVLIDKDK 439


>gi|209574004|gb|ACI62940.1| arginine decarboxylase SpeA [Acidithiobacillus thiooxidans]
          Length = 634

 Score = 50.9 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/295 (12%), Positives = 83/295 (28%), Gaps = 46/295 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  L   Q L + ++        A            +  +K      + + + +      
Sbjct: 66  PCLLRFPQILGHRVEKLRGAFTTAMQDTRYQGDYTPVYPIKVNQQRRVVEEILRAGSGNV 125

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
           G  + S  E++                YKD E   +  + + +       + K  +    
Sbjct: 126 GLEAGSKPELLAVLGLMPVGGTVICNGYKDREYIRLALSGEKLGLRVYLVVEKISELPLI 185

Query: 114 LHKKIGLRINPSV-------SYSKFILADPNRPFSRLGEKCKDKIESEIK--------NV 158
           L +   + + P +       S       +     S+ G      ++            ++
Sbjct: 186 LSESRDIGVQPRIGVRARLASAGAGKWQNTGGEKSKFGLSTAHILDLLEHLRRENALQSL 245

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDK-------- 207
             L FH   +  +       ++   +   E       +E + +GGG+    +        
Sbjct: 246 QLLHFHLGSQIPNIQFIKGGMRECARLYAELRRLGAALEVVDVGGGLGVDYEGTHSRAYC 305

Query: 208 -------DYPVKDFCQRLKEFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDISE 253
                  DY         +   ++   + ++  E G A+  +   L T V D+  
Sbjct: 306 STNYHVSDYAHAIVSALAEVSRQENLPEPHVVSESGRALTAHHAILLTNVTDVEM 360


>gi|315658302|ref|ZP_07911174.1| diaminopimelate decarboxylase [Staphylococcus lugdunensis M23590]
 gi|315496631|gb|EFU84954.1| diaminopimelate decarboxylase [Staphylococcus lugdunensis M23590]
          Length = 67

 Score = 50.9 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 16/42 (38%), Gaps = 2/42 (4%)

Query: 3  KTPYYLIDKQKLLNNLDTALYIRKNAG--VKLLLALKCFAAW 42
           TP  + D+ ++ + +       K +G    +  A K F   
Sbjct: 26 GTPTIVYDEDQIRHQMRRYHSAFKQSGLTYNISYASKAFTCL 67


>gi|221326494|gb|ACM17126.1| arginine decarboxylase [Solanum chilense]
          Length = 222

 Score = 50.9 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 45  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152
           L+   D ++K+     IGLR      +S    +       + G      + 
Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILH 214


>gi|315127025|ref|YP_004069028.1| arginine decarboxylase [Pseudoalteromonas sp. SM9913]
 gi|315015539|gb|ADT68877.1| arginine decarboxylase [Pseudoalteromonas sp. SM9913]
          Length = 637

 Score = 50.5 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 83/303 (27%), Gaps = 51/303 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +   Q L + + +       A           L+  +K      + + +        
Sbjct: 62  PALVRFPQILHHRVHSLCGAFNTAIESYGYPKDYLLVYPIKVNQQREVVEEIVASQAQVE 121

Query: 54  ----GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
               G  + S  E++  L   +        N       +        L +   I+   +S
Sbjct: 122 KKQLGLEAGSKPELLTVLALAEKTSAVIVCNGYKDKEYVRLALIGEKLGHKVYIVLEKLS 181

Query: 103 QLNKFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIE--------S 153
           +L+    +A++L+ K  + I     S  K          S+ G      +          
Sbjct: 182 ELDMVLSQAKELNVKPRIGIRVRLASQGKGKWQASGGEKSKFGLSASQVLYVVNRLKETD 241

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207
           ++  V  + FH   +    +      +       E       IE + +GGG+        
Sbjct: 242 QLDLVQLVHFHLGSQMANIRDVRLGVSEAARFYCELRKLGAHIECLDVGGGLAVDYDGTR 301

Query: 208 -------DYPVKDFCQRLKEFSEKYSVQI-------YLEPGEAIVTNTTTLNTTVLDISE 253
                  +Y + ++   +         Q          E G A+  +   L + V+    
Sbjct: 302 SQSHNSMNYSLAEYANNIVYTIGDICKQYEQPFPTIISESGRALTAHHAVLISNVIGTET 361

Query: 254 NIK 256
              
Sbjct: 362 YTP 364


>gi|325971327|ref|YP_004247518.1| arginine decarboxylase [Spirochaeta sp. Buddy]
 gi|324026565|gb|ADY13324.1| arginine decarboxylase [Spirochaeta sp. Buddy]
          Length = 637

 Score = 50.5 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/315 (10%), Positives = 83/315 (26%), Gaps = 40/315 (12%)

Query: 18  LDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLGHEKF-GG 72
           L+           + +  +K      + + + +Y      G  + S  E+++        
Sbjct: 82  LNAIKDAGYQGTYRGVYPIKVNQQQQVVEEICKYGQQYHHGLETGSKAELIIALAHIDDP 141

Query: 73  ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------FKDKAQKLHKKIGLRINPSV 126
           E +     YKD E   +      +   TV  +           +++ L  K  + +    
Sbjct: 142 EAYVICNGYKDEEYIDLALKGLQLGIQTVLVVEMPGEVGIILQRSRALGIKPNIGLRMKP 201

Query: 127 SYSKFILADPNRPFSR-LGEKCKDKIE--------SEIKNVNGLMFHNNCENKSFLCFSA 177
           S         +       G      ++        + +  +  L +H   +  +      
Sbjct: 202 STMASGHWTDSGGDRSVFGLNTTQVVQVVDRLRKENMLDCLKLLHYHLGSQIPNIHDIRV 261

Query: 178 MLKNIEKEFG---HFITQIEWISLGGGIHFTDK--------------DYPVKDFCQRLKE 220
                 + +    H    +  + +GGG+                        D  + +  
Sbjct: 262 GATEAARFYAGLVHEGAAMGLLDMGGGLAIDYDGSHSNSSNSRNYSTKEYCDDVVEEIMT 321

Query: 221 FSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE 277
             ++       +  E G A+V+  + L   +LD +         +   +  +   L    
Sbjct: 322 ICKEENIPHPTLISESGRALVSYYSVLLMNILDTNVFWDGKNSEEDVYDDAMMPALENLL 381

Query: 278 SATIYPNTGPYTAMV 292
                 N       +
Sbjct: 382 YVRTMLNEKNAQECL 396


>gi|242399214|ref|YP_002994638.1| putative amino acid racemase [Thermococcus sibiricus MM 739]
 gi|242265607|gb|ACS90289.1| putative amino acid racemase [Thermococcus sibiricus MM 739]
          Length = 375

 Score = 50.5 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/333 (10%), Positives = 87/333 (26%), Gaps = 15/333 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           + TP  ++D  KL  N+       K    +L   +K   +  + +   +    G    ++
Sbjct: 7   LPTPLVVVDLDKLEFNIKEVAKEAKKHNKQLFPMVKTHKSVYVANLQKKAGAGGFLCGTI 66

Query: 61  YEVMLGHEKFGGE------THAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114
            E     E   GE             +                 ++V         A+  
Sbjct: 67  DEAEALAEAGLGETLMLAYPIMDKENFSRVARLIEDGLRVIFRIDSVDAAEFLD--AELK 124

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174
            + +       V                  ++ K+    E   +      +     +   
Sbjct: 125 KRGLRAEFTIIVDTGGVRYGIEPEKVGNFAKRVKEYSNLEFVGIT-THPGHVYNATNPKE 183

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
             A+ +   K     +  +   ++   I         +   +            +Y +  
Sbjct: 184 VKAIAEQATKGMKIALRSLRQWNMNPEIVGIGSTPTFRFDIEEEIYTHLFPGNYVYYDRQ 243

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY---QESATIYPNTGPYTAM 291
           +A++  +  L    L I   + ++          +    LY   +    +          
Sbjct: 244 QALIFGSANLERCALTIFVTVTSIAERCGKRFGLINAGSLYFDKRGHEILGSFGQAVEYP 303

Query: 292 VCGRSCLAGDI-FGEFHFEKPVKIGDRI-SFED 322
                 L+ ++   +   E  VK+G++I    +
Sbjct: 304 RAKLIGLSQEVGKIDVTNEPDVKVGEKINVIPN 336


>gi|32266732|ref|NP_860764.1| arginine decarboxylase [Helicobacter hepaticus ATCC 51449]
 gi|32262783|gb|AAP77830.1| arginine decarboxylase [Helicobacter hepaticus ATCC 51449]
          Length = 617

 Score = 50.5 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 47/300 (15%), Positives = 91/300 (30%), Gaps = 49/300 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTLNQYMD-- 53
           P  L     + N +D      ++A          K +  LK       +   + Q  D  
Sbjct: 46  PLLLRFPHLIKNQVDKVFKAFESAIKEYSYKGKFKAVFPLKVNQMPNFVLPLVEQSQDKC 105

Query: 54  -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNK 106
            G  + S  E++L               +KD E+       A + +  T+    +++L  
Sbjct: 106 YGLEAGSKSELILAMAYVNKNAPITVNGFKDKEMISLGFSAANMGHDITLTIEGLNELET 165

Query: 107 FKDKAQ---KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155
             + A+   + +  IGLRI    S    I A      S+ G    + +E+          
Sbjct: 166 IIEVAKELGEPYPNIGLRIRL-HSIGVGIWAKSGGINSKFGLTSTELLEAINMLEKEQLL 224

Query: 156 KNVNGLMFHNNCENKSFLC----FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
                + FH   +                   +        ++ +++GGG+      +  
Sbjct: 225 HKFTMIHFHIGSQMSDISPLKKAIREAGNIYAELRKKGAKNLQCVNIGGGLAVEYTQHEG 284

Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
           K+ C                 + +  ++    I +E G  I  N   L   VL++     
Sbjct: 285 KNSCNYTLSEFSGDVVFSLREIAKNKKEPEPDILIESGRFIAANHAVLIAPVLELFSQEY 344


>gi|62202126|gb|AAH92747.1| Zgc:110131 [Danio rerio]
 gi|182891682|gb|AAI64997.1| Zgc:110131 protein [Danio rerio]
          Length = 198

 Score = 50.5 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/148 (11%), Positives = 44/148 (29%), Gaps = 6/148 (4%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
           K+ ++  D   ++              ++    +K  ++  + + L     G   S+ +E
Sbjct: 37  KSAFFAADLGVIVQQQARWRNKMDQ--IRPFYTVKSNSSPVVVELLASLRTGFICSNKHE 94

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + L        +        K       A   N   ++ +  +++ K   +     K + 
Sbjct: 95  LDLVKGFGVSSQDIILGGTCKQLSHIKYAAKHNIPLLVCDNEAEMRKI-ARCHPKAKVLL 153

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKC 147
           L  + S       +         L E+ 
Sbjct: 154 LLTSESCCEVCLRMCWRGLEQVLLLEEV 181


>gi|198283310|ref|YP_002219631.1| arginine decarboxylase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218667242|ref|YP_002425898.1| arginine decarboxylase [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|198247831|gb|ACH83424.1| arginine decarboxylase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218519455|gb|ACK80041.1| arginine decarboxylase [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 637

 Score = 50.5 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/308 (12%), Positives = 81/308 (26%), Gaps = 46/308 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  L   Q L + +        +A            +  +K      + + + +      
Sbjct: 60  PCLLRFPQILGDRVARLHGAFGDAIRALDYKGSFTPVYPIKVNQQRRVVEEILRAGAGSV 119

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNKF 107
           G  + S  E++                YKD E          L     ++    S+L   
Sbjct: 120 GLEAGSKPELLAVIGLMPVGGTIICNGYKDKEYIRLALTGEKLGMQVYLVVEKPSELPLI 179

Query: 108 KDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEIK--------NV 158
            ++A +L  K  + +     S       +     S+ G    D +E   +        ++
Sbjct: 180 LNEASRLGVKPRIGVRARLASAGSGKWQNTGGEKSKFGLSTADILELVHRLRAENALDSL 239

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWIS-----------------L 198
             L FH   +  +       ++   +   E       +E +                   
Sbjct: 240 QLLHFHLGSQIPNIQFIRGGMRECARLYAELRRLGAALEVVDVGGGLGVDYEGTHSRAYC 299

Query: 199 GGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
               H +D  + +      +         +I  E G A+  +   L   V D+       
Sbjct: 300 STNYHVSDYAHAIVATLADVSRQEGLPEPRIISESGRALTAHHAILVANVSDVEMAAGEH 359

Query: 259 VIVDSSVE 266
                S +
Sbjct: 360 PPSTPSAD 367


>gi|323492818|ref|ZP_08097960.1| arginine decarboxylase [Vibrio brasiliensis LMG 20546]
 gi|323312889|gb|EGA66011.1| arginine decarboxylase [Vibrio brasiliensis LMG 20546]
          Length = 636

 Score = 50.5 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/270 (11%), Positives = 69/270 (25%), Gaps = 35/270 (12%)

Query: 5   PYYLIDKQKLLNN----LDTALYIRKNA----GVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +   Q L               +         L+  +K      + D + +      
Sbjct: 61  PVLVRFPQILHQRVHGICQAFNQAIEENQYQNNYLLVYPIKVNQQKEVVDEILESQAQLE 120

Query: 54  ----GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
               G  + S  E++  L   +        N       I        L +   I+   +S
Sbjct: 121 TKQLGLEAGSKPELLAVLALAQKASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 180

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153
           +L+    +A+ L  K  L +   ++         +     + G      +        E 
Sbjct: 181 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVIERLKQEQ 240

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
           ++  +  + FH   +    +              E       I +  +GGG+        
Sbjct: 241 QLDAMQLVHFHLGSQMANIRDIRNGVNESARFYCELRAMGADITYFDIGGGLAVDYDG-T 299

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
                  +     +Y+  I    G+     
Sbjct: 300 RSQSSNSMNYGLIEYARNIVSTVGDVCQQY 329


>gi|327403924|ref|YP_004344762.1| Orn/DAP/Arg decarboxylase 2 [Fluviicola taffensis DSM 16823]
 gi|327319432|gb|AEA43924.1| Orn/DAP/Arg decarboxylase 2 [Fluviicola taffensis DSM 16823]
          Length = 465

 Score = 50.5 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/316 (12%), Positives = 82/316 (25%), Gaps = 39/316 (12%)

Query: 87  DAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEK 146
                     + +  ++++       +   KIG+RI                   R    
Sbjct: 146 IEDKRLNIIPVVDNTAEIHDLIAATGENELKIGIRIASEEEPKFEFYTSRLGIRYREIVP 205

Query: 147 CKDKIESEIKN--VNGLMFHNNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGG 201
                  +     +  L F  N        +   L        +       ++ +++GGG
Sbjct: 206 FYKAFIQDNPRVQIKMLHFFINTGINDTSYYWNELTKCLRIYSDLKKVCPTLDSLNIGGG 265

Query: 202 IH----------FTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251
                       +      +    +R+   ++     IY E G   V  +      VL  
Sbjct: 266 FPIKKSLAFEFDYAYMVREILMQVKRVCSDNDIPEPNIYTEFGSFTVGESGGAIFNVLHQ 325

Query: 252 SENIKN--LVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIF-- 303
            +        ++DSS   ++PD     +     A    N      ++ G +C + D +  
Sbjct: 326 KQQNDREKWNMIDSSFMTNLPDTWAINQRFIMLAINRWNDDYERVLLGGLTCDSDDYYNS 385

Query: 304 ---GEFHFEKPVKIGDRISF--EDVAGYNINRKNWFNG-----INMPTIAVKNVDGTIKA 353
                  +         +     +   Y       F G     I  P   +   D   K 
Sbjct: 386 EQHSNAIYLPKFDKNKPLYIGYFNTGAYQETIG-GFGGLKHCLIPEPKHVLIQRDEHGKI 444

Query: 354 I-----REFSYNDYYN 364
           +      E +  D+  
Sbjct: 445 VTELFSEEQTAEDFMR 460


>gi|221326302|gb|ACM17030.1| arginine decarboxylase [Solanum chilense]
          Length = 222

 Score = 50.5 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 39/116 (33%), Gaps = 15/116 (12%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 45  PLVVRFPDVLKNRLESLQSAFDFAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLN 105
               + S  E++L      K   E       +KD +  ++      + FNTV  L 
Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDADYISLALVARKLQFNTVIVLE 160


>gi|78777330|ref|YP_393645.1| arginine decarboxylase [Sulfurimonas denitrificans DSM 1251]
 gi|78497870|gb|ABB44410.1| arginine decarboxylase [Sulfurimonas denitrificans DSM 1251]
          Length = 609

 Score = 50.5 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 41/291 (14%), Positives = 85/291 (29%), Gaps = 45/291 (15%)

Query: 11  KQKLLNNLDTALYIRKNAGVK----LLLALKCFAAWGMFDTLNQYMD----GTTSSSLYE 62
           K ++    +      +    +     +  LK          +         G  + S  E
Sbjct: 56  KSQIRTLYNYFDKAIQQNNYQGSFNAVFPLKVNQFPHAIAAITSQGAQFNYGLEAGSKAE 115

Query: 63  VMLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNKFKDKAQKLH- 115
           ++L   K     +     +KD E+       A   +  TI    + +L    + A++   
Sbjct: 116 LILAMSKTPSGANITVNGFKDKEMITLGFIAAQSGHNITITIEGLGELETIIEVAKECKL 175

Query: 116 --KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNVNGLMFHN 165
               IG+R+    S    I A      ++ G    + IE+         +  ++ + FH 
Sbjct: 176 KVPNIGIRVRL-HSAGSGIWAKSGGMDAKFGLTSTEIIEAITLLREADLLDYLSMIHFHI 234

Query: 166 NCENKSFLCFSAMLKNIEKEFGHFIT----QIEWISLGGGIHFTDKDYPVKDFCQR---- 217
             +          L+     +         ++  I++GGG+      +   +        
Sbjct: 235 GSQMSDIAPLKKALREAGNIYAELKKMGATKLNSINIGGGLAVEYDQHTHSNSRNYSIDE 294

Query: 218 -----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN 257
                      +          I+ E G  IV +   L T VL++      
Sbjct: 295 FSSSVVFLLGEIMNAKNVSHPDIFTESGRFIVASHAVLITPVLELFTQDFQ 345



 Score = 40.9 bits (94), Expect = 0.33,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 29/98 (29%), Gaps = 13/98 (13%)

Query: 269 VPDYLLYQESATIYPNTGPYT-----AMVCGRSCLAGDIFG------EFHFEKPVKIGDR 317
           +PDY    +   + P     T     A +   +C +    G       +  +  +   D 
Sbjct: 449 LPDYWGLNQHFPVMPLHHLNTTPLRAASLWDITCDSDGEIGFNPDKPLYLHDVNLDEEDY 508

Query: 318 -ISFEDVAGYNINRKNWFNGINMPTIA-VKNVDGTIKA 353
            + F +V  Y        N    P+   +   +   + 
Sbjct: 509 FLGFFNVGAYQETLGMNHNLFTHPSEYTIIIGENDYEI 546


>gi|221326214|gb|ACM16986.1| arginine decarboxylase [Solanum corneliomuelleri]
          Length = 222

 Score = 50.5 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 52/171 (30%), Gaps = 24/171 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 45  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQ 103
               + S  E++L      K   E       +KD E          L     I+     +
Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLHLNTVIVLEQEEE 164

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152
           L+   D ++K+     IGLR      +S    +       + G      + 
Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214


>gi|221326482|gb|ACM17120.1| arginine decarboxylase [Solanum peruvianum]
          Length = 222

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 53/171 (30%), Gaps = 24/171 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 45  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164

Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152
           L+   D ++K+  +   GLR      +S    +       + G      + 
Sbjct: 165 LDLVIDISRKMEVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214


>gi|221325932|gb|ACM16845.1| arginine decarboxylase [Solanum chilense]
 gi|221325956|gb|ACM16857.1| arginine decarboxylase [Solanum chilense]
 gi|221325960|gb|ACM16859.1| arginine decarboxylase [Solanum chilense]
 gi|221325962|gb|ACM16860.1| arginine decarboxylase [Solanum chilense]
 gi|221325964|gb|ACM16861.1| arginine decarboxylase [Solanum chilense]
 gi|221326140|gb|ACM16949.1| arginine decarboxylase [Solanum chilense]
 gi|221326142|gb|ACM16950.1| arginine decarboxylase [Solanum chilense]
 gi|221326144|gb|ACM16951.1| arginine decarboxylase [Solanum chilense]
 gi|221326244|gb|ACM17001.1| arginine decarboxylase [Solanum chilense]
 gi|221326246|gb|ACM17002.1| arginine decarboxylase [Solanum chilense]
 gi|221326300|gb|ACM17029.1| arginine decarboxylase [Solanum chilense]
 gi|221326378|gb|ACM17068.1| arginine decarboxylase [Solanum chilense]
 gi|221326380|gb|ACM17069.1| arginine decarboxylase [Solanum chilense]
 gi|221326404|gb|ACM17081.1| arginine decarboxylase [Solanum chilense]
 gi|221326424|gb|ACM17091.1| arginine decarboxylase [Solanum chilense]
 gi|221326428|gb|ACM17093.1| arginine decarboxylase [Solanum chilense]
 gi|221326432|gb|ACM17095.1| arginine decarboxylase [Solanum chilense]
 gi|221326436|gb|ACM17097.1| arginine decarboxylase [Solanum chilense]
 gi|221326440|gb|ACM17099.1| arginine decarboxylase [Solanum chilense]
 gi|221326442|gb|ACM17100.1| arginine decarboxylase [Solanum chilense]
 gi|221326448|gb|ACM17103.1| arginine decarboxylase [Solanum chilense]
 gi|221326464|gb|ACM17111.1| arginine decarboxylase [Solanum chilense]
 gi|221326472|gb|ACM17115.1| arginine decarboxylase [Solanum chilense]
 gi|221326474|gb|ACM17116.1| arginine decarboxylase [Solanum chilense]
 gi|221326488|gb|ACM17123.1| arginine decarboxylase [Solanum chilense]
          Length = 222

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 53/171 (30%), Gaps = 24/171 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 45  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164

Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152
           L+   D ++K+  +   GLR      +S    +       + G      + 
Sbjct: 165 LDLVIDISRKMEVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214


>gi|221326228|gb|ACM16993.1| arginine decarboxylase [Solanum habrochaites]
 gi|221326230|gb|ACM16994.1| arginine decarboxylase [Solanum habrochaites]
 gi|221326400|gb|ACM17079.1| arginine decarboxylase [Solanum habrochaites]
 gi|221326402|gb|ACM17080.1| arginine decarboxylase [Solanum habrochaites]
          Length = 222

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 45  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDVEYISLALVARKLQLNTVIVLEQEEE 164

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152
           L+   D ++K+     IGLR      +S    +       + G      + 
Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214


>gi|269837824|ref|YP_003320052.1| alanine racemase domain-containing protein [Sphaerobacter
           thermophilus DSM 20745]
 gi|269787087|gb|ACZ39230.1| alanine racemase domain protein [Sphaerobacter thermophilus DSM
           20745]
          Length = 370

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 46/168 (27%), Gaps = 14/168 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGTTSSSL 60
           + TP  +ID   +  N+            KL    K   +  +    L     G T + L
Sbjct: 16  VDTPALVIDADAMERNIARMAAFFAERPAKLRPHAKTHKSPIIAHKQLEAGAVGITCAKL 75

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTII----FNTVSQLNKFKDKAQKLHK 116
            E     E    +    N      +I  ++            + +    +  + A     
Sbjct: 76  GEAEALVEGGIKDILIANQIVGPVKIARLVRLARHANLAVAVDDLDNARQISEAAVAAGS 135

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFH 164
            + + +  +V          NR     G    +  +     + GL F 
Sbjct: 136 TVRVLVEVNVG--------MNRCGVEPGAPAVELAQRVAS-LPGLHFF 174


>gi|330963447|gb|EGH63707.1| arginine decarboxylase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 278

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/209 (11%), Positives = 51/209 (24%), Gaps = 26/209 (12%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53
           P  +     L + +                 +    L  +K      + +  +       
Sbjct: 70  PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------- 106
           G  + S  E+M                YKD E   +      +  N    + K       
Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELV 189

Query: 107 FKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EIKNV 158
            ++ A+              S +    AD     S+ G      +            + +
Sbjct: 190 IEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRKAGLDQGI 249

Query: 159 NGLMFHNNCENKSFLCFSAMLKNIEKEFG 187
             L FH   +  +   +    K   + +G
Sbjct: 250 RLLHFHMGSQIANLADYQHGFKEAIRYYG 278


>gi|169608606|ref|XP_001797722.1| hypothetical protein SNOG_07385 [Phaeosphaeria nodorum SN15]
 gi|160701681|gb|EAT84851.2| hypothetical protein SNOG_07385 [Phaeosphaeria nodorum SN15]
          Length = 708

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/212 (12%), Positives = 57/212 (26%), Gaps = 13/212 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           + TP  ++D   +  N+   +      GV +   LK   +  +   L      G   + L
Sbjct: 352 LDTPSMIVDLDLMEANIKKLMERLLPTGVNIRPHLKTTKSALLAQRLVDAGAKGGCVAKL 411

Query: 61  YEVM-LGHEKFGGETHAYNVAYKDCEID----AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E   +  + F        +                    I+ ++        D+ +K  
Sbjct: 412 SEAEVMCAKGFDDLLITCEIIGAPKVKRLAELFKKHKSIRIVVDSEVGARAINDELKKSG 471

Query: 116 KKIGLRINPSVSYSKFILADPNR-PFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174
               + +   +             P  +L           +  V G   H    +     
Sbjct: 472 VDGRIAVLIDLDVGLHRTGIQPGEPALKLAACIAQLDHMALIGVQGYEGHLQHVHSFEER 531

Query: 175 FSAMLKNI------EKEFGHFITQIEWISLGG 200
            +  L+++               QI+ ++ GG
Sbjct: 532 KAKCLESMQILTSTANALREAGHQIDVVTTGG 563


>gi|221325938|gb|ACM16848.1| arginine decarboxylase [Solanum peruvianum]
          Length = 222

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 52/171 (30%), Gaps = 24/171 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L +               A  + +  +KC     + + + ++  G  
Sbjct: 45  PLVVRFPDVLKNRLKSLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152
           L+   D ++K+     IGLR      +S    +       + G      + 
Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214


>gi|221326486|gb|ACM17122.1| arginine decarboxylase [Solanum peruvianum]
          Length = 222

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 45  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152
           L+   D ++K+     IGLR      +S    +       + G      + 
Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214


>gi|221326292|gb|ACM17025.1| arginine decarboxylase [Solanum arcanum]
 gi|221326294|gb|ACM17026.1| arginine decarboxylase [Solanum arcanum]
          Length = 222

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 45  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152
           L+   D ++K+     IGLR      +S    +       + G      + 
Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214


>gi|221326286|gb|ACM17022.1| arginine decarboxylase [Solanum pennellii]
          Length = 222

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 45  PLVVRFPDVLKNRLESLQSAFDYAVKSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152
           L+   D ++K+     IGLR      +S    +       + G      + 
Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214


>gi|221326234|gb|ACM16996.1| arginine decarboxylase [Solanum pennellii]
          Length = 222

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 45  PLVVRFPDVLKNRLESLQSAFDYVVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152
           L+   D ++K+     IGLR      +S    +       + G      + 
Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214


>gi|221326200|gb|ACM16979.1| arginine decarboxylase [Solanum arcanum]
          Length = 222

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 45  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152
           L+   D ++K+     IGLR      +S    +       + G      + 
Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214


>gi|221326176|gb|ACM16967.1| arginine decarboxylase [Solanum lycopersicum]
 gi|221326178|gb|ACM16968.1| arginine decarboxylase [Solanum lycopersicum]
          Length = 222

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 45  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152
           L+   D ++K+     IGLR      +S    +       + G      + 
Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214


>gi|221326170|gb|ACM16964.1| arginine decarboxylase [Solanum corneliomuelleri]
 gi|221326240|gb|ACM16999.1| arginine decarboxylase [Solanum corneliomuelleri]
 gi|221326242|gb|ACM17000.1| arginine decarboxylase [Solanum corneliomuelleri]
 gi|221326248|gb|ACM17003.1| arginine decarboxylase [Solanum huaylasense]
 gi|221326250|gb|ACM17004.1| arginine decarboxylase [Solanum huaylasense]
 gi|221326282|gb|ACM17020.1| arginine decarboxylase [Solanum huaylasense]
 gi|221326332|gb|ACM17045.1| arginine decarboxylase [Solanum huaylasense]
 gi|221326384|gb|ACM17071.1| arginine decarboxylase [Solanum peruvianum]
 gi|221326386|gb|ACM17072.1| arginine decarboxylase [Solanum peruvianum]
 gi|221326414|gb|ACM17086.1| arginine decarboxylase [Solanum peruvianum]
 gi|221326484|gb|ACM17121.1| arginine decarboxylase [Solanum peruvianum]
 gi|221326496|gb|ACM17127.1| arginine decarboxylase [Solanum peruvianum]
 gi|221326498|gb|ACM17128.1| arginine decarboxylase [Solanum peruvianum]
          Length = 222

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 45  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152
           L+   D ++K+     IGLR      +S    +       + G      + 
Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214


>gi|221326146|gb|ACM16952.1| arginine decarboxylase [Solanum chilense]
          Length = 222

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 45  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152
           L+   D ++K+     IGLR      +S    +       + G      + 
Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214


>gi|221326024|gb|ACM16891.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|221326026|gb|ACM16892.1| arginine decarboxylase [Solanum pimpinellifolium]
          Length = 222

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 45  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152
           L+   D ++K+     IGLR      +S    +       + G      + 
Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214


>gi|221325950|gb|ACM16854.1| arginine decarboxylase [Solanum peruvianum]
          Length = 222

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 45  PLVVRFPDVLKNRLESLQSAFDCAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152
           L+   D ++K+     IGLR      +S    +       + G      + 
Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214


>gi|221325934|gb|ACM16846.1| arginine decarboxylase [Solanum chilense]
 gi|221325936|gb|ACM16847.1| arginine decarboxylase [Solanum peruvianum]
 gi|221325940|gb|ACM16849.1| arginine decarboxylase [Solanum peruvianum]
 gi|221325942|gb|ACM16850.1| arginine decarboxylase [Solanum peruvianum]
 gi|221325944|gb|ACM16851.1| arginine decarboxylase [Solanum peruvianum]
 gi|221325946|gb|ACM16852.1| arginine decarboxylase [Solanum peruvianum]
 gi|221325948|gb|ACM16853.1| arginine decarboxylase [Solanum peruvianum]
 gi|221325952|gb|ACM16855.1| arginine decarboxylase [Solanum chilense]
 gi|221325958|gb|ACM16858.1| arginine decarboxylase [Solanum chilense]
 gi|221325966|gb|ACM16862.1| arginine decarboxylase [Solanum chilense]
 gi|221325968|gb|ACM16863.1| arginine decarboxylase [Solanum chilense]
 gi|221325972|gb|ACM16865.1| arginine decarboxylase [Solanum peruvianum]
 gi|221325974|gb|ACM16866.1| arginine decarboxylase [Solanum peruvianum]
 gi|221325976|gb|ACM16867.1| arginine decarboxylase [Solanum neorickii]
 gi|221325978|gb|ACM16868.1| arginine decarboxylase [Solanum neorickii]
 gi|221325980|gb|ACM16869.1| arginine decarboxylase [Solanum neorickii]
 gi|221325982|gb|ACM16870.1| arginine decarboxylase [Solanum neorickii]
 gi|221325984|gb|ACM16871.1| arginine decarboxylase [Solanum habrochaites]
 gi|221325986|gb|ACM16872.1| arginine decarboxylase [Solanum habrochaites]
 gi|221325988|gb|ACM16873.1| arginine decarboxylase [Solanum habrochaites]
 gi|221325990|gb|ACM16874.1| arginine decarboxylase [Solanum habrochaites]
 gi|221325992|gb|ACM16875.1| arginine decarboxylase [Solanum habrochaites]
 gi|221325994|gb|ACM16876.1| arginine decarboxylase [Solanum habrochaites]
 gi|221325996|gb|ACM16877.1| arginine decarboxylase [Solanum habrochaites]
 gi|221325998|gb|ACM16878.1| arginine decarboxylase [Solanum habrochaites]
 gi|221326000|gb|ACM16879.1| arginine decarboxylase [Solanum habrochaites]
 gi|221326002|gb|ACM16880.1| arginine decarboxylase [Solanum habrochaites]
 gi|221326004|gb|ACM16881.1| arginine decarboxylase [Solanum habrochaites]
 gi|221326006|gb|ACM16882.1| arginine decarboxylase [Solanum habrochaites]
 gi|221326008|gb|ACM16883.1| arginine decarboxylase [Solanum pennellii]
 gi|221326010|gb|ACM16884.1| arginine decarboxylase [Solanum pennellii]
 gi|221326016|gb|ACM16887.1| arginine decarboxylase [Solanum habrochaites]
 gi|221326018|gb|ACM16888.1| arginine decarboxylase [Solanum habrochaites]
 gi|221326028|gb|ACM16893.1| arginine decarboxylase [Solanum arcanum]
 gi|221326030|gb|ACM16894.1| arginine decarboxylase [Solanum arcanum]
 gi|221326032|gb|ACM16895.1| arginine decarboxylase [Solanum arcanum]
 gi|221326034|gb|ACM16896.1| arginine decarboxylase [Solanum arcanum]
 gi|221326044|gb|ACM16901.1| arginine decarboxylase [Solanum lycopersicum]
 gi|221326046|gb|ACM16902.1| arginine decarboxylase [Solanum lycopersicum]
 gi|221326050|gb|ACM16904.1| arginine decarboxylase [Solanum lycopersicum]
 gi|221326068|gb|ACM16913.1| arginine decarboxylase [Solanum habrochaites]
 gi|221326070|gb|ACM16914.1| arginine decarboxylase [Solanum habrochaites]
 gi|221326072|gb|ACM16915.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|221326074|gb|ACM16916.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|221326076|gb|ACM16917.1| arginine decarboxylase [Solanum neorickii]
 gi|221326078|gb|ACM16918.1| arginine decarboxylase [Solanum neorickii]
 gi|221326080|gb|ACM16919.1| arginine decarboxylase [Solanum neorickii]
 gi|221326082|gb|ACM16920.1| arginine decarboxylase [Solanum neorickii]
 gi|221326084|gb|ACM16921.1| arginine decarboxylase [Solanum neorickii]
 gi|221326086|gb|ACM16922.1| arginine decarboxylase [Solanum neorickii]
 gi|221326088|gb|ACM16923.1| arginine decarboxylase [Solanum neorickii]
 gi|221326090|gb|ACM16924.1| arginine decarboxylase [Solanum neorickii]
 gi|221326136|gb|ACM16947.1| arginine decarboxylase [Solanum arcanum]
 gi|221326138|gb|ACM16948.1| arginine decarboxylase [Solanum arcanum]
 gi|221326152|gb|ACM16955.1| arginine decarboxylase [Solanum habrochaites]
 gi|221326154|gb|ACM16956.1| arginine decarboxylase [Solanum habrochaites]
 gi|221326160|gb|ACM16959.1| arginine decarboxylase [Solanum pennellii]
 gi|221326162|gb|ACM16960.1| arginine decarboxylase [Solanum pennellii]
 gi|221326164|gb|ACM16961.1| arginine decarboxylase [Solanum corneliomuelleri]
 gi|221326166|gb|ACM16962.1| arginine decarboxylase [Solanum corneliomuelleri]
 gi|221326168|gb|ACM16963.1| arginine decarboxylase [Solanum corneliomuelleri]
 gi|221326172|gb|ACM16965.1| arginine decarboxylase [Solanum chmielewskii]
 gi|221326174|gb|ACM16966.1| arginine decarboxylase [Solanum chmielewskii]
 gi|221326180|gb|ACM16969.1| arginine decarboxylase [Solanum neorickii]
 gi|221326182|gb|ACM16970.1| arginine decarboxylase [Solanum neorickii]
 gi|221326184|gb|ACM16971.1| arginine decarboxylase [Solanum chmielewskii]
 gi|221326186|gb|ACM16972.1| arginine decarboxylase [Solanum chmielewskii]
 gi|221326196|gb|ACM16977.1| arginine decarboxylase [Solanum huaylasense x Solanum peruvianum]
 gi|221326198|gb|ACM16978.1| arginine decarboxylase [Solanum huaylasense x Solanum peruvianum]
 gi|221326202|gb|ACM16980.1| arginine decarboxylase [Solanum arcanum]
 gi|221326204|gb|ACM16981.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|221326206|gb|ACM16982.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|221326212|gb|ACM16985.1| arginine decarboxylase [Solanum corneliomuelleri]
 gi|221326220|gb|ACM16989.1| arginine decarboxylase [Solanum arcanum]
 gi|221326222|gb|ACM16990.1| arginine decarboxylase [Solanum arcanum]
 gi|221326232|gb|ACM16995.1| arginine decarboxylase [Solanum pennellii]
 gi|221326236|gb|ACM16997.1| arginine decarboxylase [Solanum pennellii]
 gi|221326238|gb|ACM16998.1| arginine decarboxylase [Solanum pennellii]
 gi|221326252|gb|ACM17005.1| arginine decarboxylase [Solanum arcanum x Solanum peruvianum]
 gi|221326254|gb|ACM17006.1| arginine decarboxylase [Solanum arcanum x Solanum peruvianum]
 gi|221326256|gb|ACM17007.1| arginine decarboxylase [Solanum habrochaites]
 gi|221326258|gb|ACM17008.1| arginine decarboxylase [Solanum habrochaites]
 gi|221326268|gb|ACM17013.1| arginine decarboxylase [Solanum arcanum]
 gi|221326270|gb|ACM17014.1| arginine decarboxylase [Solanum arcanum]
 gi|221326272|gb|ACM17015.1| arginine decarboxylase [Solanum habrochaites]
 gi|221326274|gb|ACM17016.1| arginine decarboxylase [Solanum habrochaites]
 gi|221326276|gb|ACM17017.1| arginine decarboxylase [Solanum neorickii]
 gi|221326278|gb|ACM17018.1| arginine decarboxylase [Solanum neorickii]
 gi|221326280|gb|ACM17019.1| arginine decarboxylase [Solanum huaylasense]
 gi|221326284|gb|ACM17021.1| arginine decarboxylase [Solanum pennellii]
 gi|221326288|gb|ACM17023.1| arginine decarboxylase [Solanum habrochaites]
 gi|221326290|gb|ACM17024.1| arginine decarboxylase [Solanum habrochaites]
 gi|221326296|gb|ACM17027.1| arginine decarboxylase [Solanum chilense]
 gi|221326298|gb|ACM17028.1| arginine decarboxylase [Solanum chilense]
 gi|221326308|gb|ACM17033.1| arginine decarboxylase [Solanum chmielewskii]
 gi|221326310|gb|ACM17034.1| arginine decarboxylase [Solanum chmielewskii]
 gi|221326312|gb|ACM17035.1| arginine decarboxylase [Solanum chmielewskii]
 gi|221326314|gb|ACM17036.1| arginine decarboxylase [Solanum chmielewskii]
 gi|221326316|gb|ACM17037.1| arginine decarboxylase [Solanum neorickii]
 gi|221326318|gb|ACM17038.1| arginine decarboxylase [Solanum neorickii]
 gi|221326324|gb|ACM17041.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|221326326|gb|ACM17042.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|221326328|gb|ACM17043.1| arginine decarboxylase [Solanum huaylasense]
 gi|221326334|gb|ACM17046.1| arginine decarboxylase [Solanum huaylasense]
 gi|221326336|gb|ACM17047.1| arginine decarboxylase [Solanum arcanum]
 gi|221326338|gb|ACM17048.1| arginine decarboxylase [Solanum arcanum]
 gi|221326340|gb|ACM17049.1| arginine decarboxylase [Solanum pennellii]
 gi|221326342|gb|ACM17050.1| arginine decarboxylase [Solanum pennellii]
 gi|221326344|gb|ACM17051.1| arginine decarboxylase [Solanum peruvianum]
 gi|221326346|gb|ACM17052.1| arginine decarboxylase [Solanum peruvianum]
 gi|221326348|gb|ACM17053.1| arginine decarboxylase [Solanum chmielewskii]
 gi|221326350|gb|ACM17054.1| arginine decarboxylase [Solanum chmielewskii]
 gi|221326352|gb|ACM17055.1| arginine decarboxylase [Solanum chmielewskii]
 gi|221326354|gb|ACM17056.1| arginine decarboxylase [Solanum chmielewskii]
 gi|221326356|gb|ACM17057.1| arginine decarboxylase [Solanum chmielewskii]
 gi|221326358|gb|ACM17058.1| arginine decarboxylase [Solanum chmielewskii]
 gi|221326360|gb|ACM17059.1| arginine decarboxylase [Solanum neorickii]
 gi|221326362|gb|ACM17060.1| arginine decarboxylase [Solanum neorickii]
 gi|221326364|gb|ACM17061.1| arginine decarboxylase [Solanum chmielewskii]
 gi|221326366|gb|ACM17062.1| arginine decarboxylase [Solanum chmielewskii]
 gi|221326368|gb|ACM17063.1| arginine decarboxylase [Solanum chmielewskii]
 gi|221326372|gb|ACM17065.1| arginine decarboxylase [Solanum chmielewskii]
 gi|221326374|gb|ACM17066.1| arginine decarboxylase [Solanum chmielewskii]
 gi|221326376|gb|ACM17067.1| arginine decarboxylase [Solanum chilense]
 gi|221326382|gb|ACM17070.1| arginine decarboxylase [Solanum chilense]
 gi|221326408|gb|ACM17083.1| arginine decarboxylase [Solanum peruvianum]
 gi|221326410|gb|ACM17084.1| arginine decarboxylase [Solanum peruvianum]
 gi|221326412|gb|ACM17085.1| arginine decarboxylase [Solanum peruvianum]
 gi|221326416|gb|ACM17087.1| arginine decarboxylase [Solanum pennellii]
 gi|221326418|gb|ACM17088.1| arginine decarboxylase [Solanum pennellii]
 gi|221326420|gb|ACM17089.1| arginine decarboxylase [Solanum pennellii]
 gi|221326422|gb|ACM17090.1| arginine decarboxylase [Solanum pennellii]
 gi|221326426|gb|ACM17092.1| arginine decarboxylase [Solanum chilense]
 gi|221326430|gb|ACM17094.1| arginine decarboxylase [Solanum chilense]
 gi|221326434|gb|ACM17096.1| arginine decarboxylase [Solanum chilense]
 gi|221326438|gb|ACM17098.1| arginine decarboxylase [Solanum chilense]
 gi|221326450|gb|ACM17104.1| arginine decarboxylase [Solanum chilense]
 gi|221326456|gb|ACM17107.1| arginine decarboxylase [Solanum chilense]
 gi|221326458|gb|ACM17108.1| arginine decarboxylase [Solanum chilense]
 gi|221326466|gb|ACM17112.1| arginine decarboxylase [Solanum chilense]
 gi|221326476|gb|ACM17117.1| arginine decarboxylase [Solanum chilense]
 gi|221326478|gb|ACM17118.1| arginine decarboxylase [Solanum chilense]
 gi|221326480|gb|ACM17119.1| arginine decarboxylase [Solanum peruvianum]
 gi|221326490|gb|ACM17124.1| arginine decarboxylase [Solanum chilense]
 gi|221326492|gb|ACM17125.1| arginine decarboxylase [Solanum chilense]
 gi|221326504|gb|ACM17131.1| arginine decarboxylase [Solanum peruvianum]
 gi|221326506|gb|ACM17132.1| arginine decarboxylase [Solanum peruvianum]
          Length = 222

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 45  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152
           L+   D ++K+     IGLR      +S    +       + G      + 
Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214


>gi|256820695|ref|YP_003141974.1| Orn/DAP/Arg decarboxylase 2 [Capnocytophaga ochracea DSM 7271]
 gi|256582278|gb|ACU93413.1| Orn/DAP/Arg decarboxylase 2 [Capnocytophaga ochracea DSM 7271]
          Length = 463

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/322 (12%), Positives = 84/322 (26%), Gaps = 46/322 (14%)

Query: 70  FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
              ETH     +K                 + I      +     ++  K    IG+RI 
Sbjct: 122 ISKETHILCNGFKRDAYIDGIADLINRGYHNCIPIIDNYEEINLFEEKIKGSYSIGIRIA 181

Query: 124 PSVSYSKFILADPNRPFSRLGEKC--KDKIESEIKNVNGLMFHNNCENK---SFLCFSAM 178
                             +       ++  ++    +  L F  N   K    +      
Sbjct: 182 SEEDPRSEFYTSRLGIGYKNIVPFYNREIKDNPKVQLKMLHFFINTGIKDNAYYWNELLK 241

Query: 179 LKNIEKEFGHFITQIEWISLGGGIH----------FTDKDYPVKDFCQRLKEFSEKYSVQ 228
              +  +      +++ +++GGG            +      +    +   +  +     
Sbjct: 242 CLRVYIQLKKVAPELDSLNIGGGFPIKSSLAFEFDYAYMVDEIIRQIKITCDQEKVPVPN 301

Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLLYQES----ATIY 282
           I+ E G   V         ++   +        +++SS    +PD     +         
Sbjct: 302 IFTEFGSFTVGEAGGAIYEIMYQKQQNDREKWDMINSSFITTLPDSWAINKRFVLLPINR 361

Query: 283 PNTGPYTAMVCGRSCLAGDI-----------FGEFHFEKPVKIGDRISFEDVAGY----N 327
            N      ++ G +C   D              +++  KP+ IG    F +   Y     
Sbjct: 362 WNDEYERVLLGGLTCDGDDYYNSEQNMNAIYLPKYNKNKPLYIG----FFNTGAYQDSIG 417

Query: 328 INRKNWFNGINMPTIAVKNVDG 349
                    I  P I + + D 
Sbjct: 418 GVGGLQHCLIPQPKIVLIDKDK 439


>gi|221326216|gb|ACM16987.1| arginine decarboxylase [Solanum neorickii]
 gi|221326218|gb|ACM16988.1| arginine decarboxylase [Solanum neorickii]
          Length = 222

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++       A          + +  +KC     + + + ++  G  
Sbjct: 45  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYVAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152
           L+   D ++K+     IGLR      +S    +       + G      + 
Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214


>gi|221326444|gb|ACM17101.1| arginine decarboxylase [Solanum lycopersicoides]
 gi|221326446|gb|ACM17102.1| arginine decarboxylase [Solanum lycopersicoides]
 gi|221326460|gb|ACM17109.1| arginine decarboxylase [Solanum lycopersicoides]
 gi|221326462|gb|ACM17110.1| arginine decarboxylase [Solanum lycopersicoides]
 gi|221326468|gb|ACM17113.1| arginine decarboxylase [Solanum lycopersicoides]
 gi|221326470|gb|ACM17114.1| arginine decarboxylase [Solanum lycopersicoides]
          Length = 222

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 45  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152
           L+   D ++K+     IGLR      +S    +       + G      + 
Sbjct: 165 LDLVIDISRKMAVRPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214


>gi|149376959|ref|ZP_01894713.1| arginine decarboxylase [Marinobacter algicola DG893]
 gi|149358736|gb|EDM47206.1| arginine decarboxylase [Marinobacter algicola DG893]
          Length = 636

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/309 (11%), Positives = 83/309 (26%), Gaps = 51/309 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL-------N 49
           P  +     L + ++                 G   +  +K      + + L       +
Sbjct: 61  PVLIRFTDILHDRVNKLCGAFNKVAREHGYQGGYTAVYPIKVNQQRRVVEELLCAEPAAS 120

Query: 50  QYMDGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
               G  + S  E+M  L   +        N       I        L +   I+    S
Sbjct: 121 DNQIGLEAGSKPELMAVLALSRQQESVIVCNGYKDREYIRLALIGQKLGHRVFIVVEKQS 180

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSK-FILADPNRPFSRLGEKCKDKIESEI------ 155
           +L    ++A++L     + +   ++        +     S+ G      ++         
Sbjct: 181 ELPLILEEARRLGVTPLIGVRARLATIGKGNWQNTGGEKSKFGLSASQVLDVVETLHRAG 240

Query: 156 --KNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207
             +++  L FH   +    +              E  H    +  + +GGG+    +   
Sbjct: 241 ALESLQLLHFHLGSQIANIRDIQTGLRECARFYSELRHMGAPVGTVDIGGGLGVDYEGTR 300

Query: 208 -----------DYPVKDFCQRLKEFSEK---YSVQIYLEPGEAIVTNTTTLNTTVLDISE 253
                           +    L+   ++       +  E G A+  + + L T V+D   
Sbjct: 301 SRSSCSMNYSVHEYAYNVIHILQSECDRAGIPHPNLISESGRALTAHHSVLVTNVIDREV 360

Query: 254 NIKNLVIVD 262
             K      
Sbjct: 361 PDKRPPEQP 369


>gi|315223822|ref|ZP_07865670.1| arginine decarboxylase [Capnocytophaga ochracea F0287]
 gi|314946152|gb|EFS98153.1| arginine decarboxylase [Capnocytophaga ochracea F0287]
          Length = 463

 Score = 49.8 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 39/322 (12%), Positives = 84/322 (26%), Gaps = 46/322 (14%)

Query: 70  FGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
              ETH     +K                 + I      +     ++  K    IG+RI 
Sbjct: 122 ISKETHILCNGFKRDAYIDGIADLINRGYHNCIPIIDNYEEINLFEEKIKGSYSIGIRIA 181

Query: 124 PSVSYSKFILADPNRPFSRLGEKC--KDKIESEIKNVNGLMFHNNCENK---SFLCFSAM 178
                             +       ++  ++    +  L F  N   K    +      
Sbjct: 182 SEEDPRSEFYTSRLGIGYKNIVPFYNREIKDNPKVQLKMLHFFINTGIKDNAYYWNELLK 241

Query: 179 LKNIEKEFGHFITQIEWISLGGGIH----------FTDKDYPVKDFCQRLKEFSEKYSVQ 228
              +  +      +++ +++GGG            +      +    +   +  +     
Sbjct: 242 CLRVYIQLKKVAPELDSLNIGGGFPIKSSLAFEFDYAYMVDEIIRQIKITCDQEKVPVPN 301

Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDSSVEAHVPDYLLYQES----ATIY 282
           I+ E G   V         ++   +        +++SS    +PD     +         
Sbjct: 302 IFTEFGSFTVGEAGGAIYEIMYQKQQNDREKWDMINSSFITTLPDSWAINKRFVLLPINR 361

Query: 283 PNTGPYTAMVCGRSCLAGDI-----------FGEFHFEKPVKIGDRISFEDVAGY----N 327
            N      ++ G +C   D              +++  KP+ IG    F +   Y     
Sbjct: 362 WNDEYERVLLGGLTCDGDDYYNSEQNMNAIYLPKYNKNKPLYIG----FFNTGAYQDSIG 417

Query: 328 INRKNWFNGINMPTIAVKNVDG 349
                    I  P I + + D 
Sbjct: 418 GVGGLQHCLIPQPKIVLIDKDK 439


>gi|120599183|ref|YP_963757.1| arginine decarboxylase [Shewanella sp. W3-18-1]
 gi|146292747|ref|YP_001183171.1| arginine decarboxylase [Shewanella putrefaciens CN-32]
 gi|166220858|sp|A4Y5Y9|SPEA_SHEPC RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|166220860|sp|A1RKK8|SPEA_SHESW RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|120559276|gb|ABM25203.1| arginine decarboxylase [Shewanella sp. W3-18-1]
 gi|145564437|gb|ABP75372.1| arginine decarboxylase [Shewanella putrefaciens CN-32]
 gi|319426051|gb|ADV54125.1| arginine decarboxylase [Shewanella putrefaciens 200]
          Length = 637

 Score = 49.8 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 36/324 (11%), Positives = 80/324 (24%), Gaps = 51/324 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +   Q L + +++       A           L+  +K      + + +        
Sbjct: 61  PVLVRFPQILHHRVNSLCQAFDQAIQKYEYQADYLLVYPIKVNQQQTVVEEILASQASKE 120

Query: 54  ----GTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK 108
               G  + S  E+M          +      YKD E   +    + +       L K  
Sbjct: 121 VPQLGLEAGSKPELMAVLAMAQKASSVIVCNGYKDNEYIRLALIGEKLGHKVYIVLEKLS 180

Query: 109 DKAQKLHKKIGLRINPSVS-------YSKFILADPNRPFSRLGEKCKDKI--------ES 153
           +    L +   L + P +          K          S+ G      +          
Sbjct: 181 ELKMVLAESKRLGVTPRLGLRARLAFQGKGKWQASGGEKSKFGLSAAQILTVVDQLKQND 240

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207
            + ++  L FH   +    +      +       E       +    +GGG+        
Sbjct: 241 MLDSLQLLHFHLGSQIANIRDIRQGVSEAGRFYCELRELGASVNCFDVGGGLAVDYDGTR 300

Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISE 253
                           +    L +   +Y+  +     E G  +  +   L T V+    
Sbjct: 301 SQSNNSMNYGLTEYANNIVNVLTDICNEYAQPMPRIISESGRYLTAHHAVLITDVIGTEA 360

Query: 254 NIKNLVIVDSSVEAHVPDYLLYQE 277
                +   +     +   + +  
Sbjct: 361 YQPENIQPPAEESPQLLHNMWHSW 384


>gi|224135745|ref|XP_002327293.1| predicted protein [Populus trichocarpa]
 gi|222835663|gb|EEE74098.1| predicted protein [Populus trichocarpa]
          Length = 63

 Score = 49.8 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 19/48 (39%), Gaps = 1/48 (2%)

Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRIS-FEDVAGYNINRKNWFNGI 337
           M+   SC + D+         +++ D I  +  +  Y  +    FNG 
Sbjct: 1   MLFKPSCDSHDVSTSDEQMPELQVNDLIILYYYMGAYTTSAGTKFNGF 48


>gi|157962301|ref|YP_001502335.1| arginine decarboxylase [Shewanella pealeana ATCC 700345]
 gi|189046768|sp|A8H5G3|SPEA_SHEPA RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|157847301|gb|ABV87800.1| arginine decarboxylase [Shewanella pealeana ATCC 700345]
          Length = 637

 Score = 49.8 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 39/333 (11%), Positives = 93/333 (27%), Gaps = 59/333 (17%)

Query: 1   MIKT----PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMF-DT 47
           M+K+    P  +   Q L + +++       A           L+  +K      +  + 
Sbjct: 53  MVKSGVALPVLVRFPQILHHRVNSVCQAFNQAINKYQYENDYLLVYPIKVNQQQTVVEEI 112

Query: 48  LNQYMD------GTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEID------AVLSNCD 94
           L   +       G  + S  E+M          +      YKD E          L +  
Sbjct: 113 LASQVAKEVPQLGLEAGSKPELMAVLAMAQKASSVIICNGYKDKEYIRLALIGEKLGHKV 172

Query: 95  TIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIES 153
            I+   +S+L    ++A++L     L +   +++        +     + G      ++ 
Sbjct: 173 YIVLEKMSELKVVLEQAKELGVTPRLGLRVRLAFQGKGKWQASGGEKSKFGLSAAQVLQV 232

Query: 154 EI--------KNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGI 202
                     +++  L FH   +    +      +       E       ++   +GGG+
Sbjct: 233 INSLKQENMLESLELLHFHLGSQIANIRDIRQGVSEAGRFYCELMKLGASVKCFDVGGGL 292

Query: 203 HFTDK--------------DYPVKDFCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLN 245
                                   +    L +  ++Y   +     E G  +  +   L 
Sbjct: 293 AVDYDGTRSQSSHSMNYGLTEYANNIVSVLTDMCKEYEQPMPRIISESGRYLTAHHAVLL 352

Query: 246 TTVLDISENIKNLVIVDSSVE----AHVPDYLL 274
           T V+         +   +        ++    +
Sbjct: 353 TDVIGTEAYKPEDIQPPAEDAPQLLHNMWQSWI 385


>gi|188586547|ref|YP_001918092.1| alanine racemase domain protein [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179351234|gb|ACB85504.1| alanine racemase domain protein [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 362

 Score = 49.8 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/333 (11%), Positives = 89/333 (26%), Gaps = 28/333 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  L+D   L  N++      ++    +   +K      +    +++   G T +  
Sbjct: 14  LPTPALLLDMSNLEYNINLLADFFRDKPCDIRPHMKGHKNLTIAHMQIDRGAIGVTCAKT 73

Query: 61  YEVMLGHEKFGGETHAYNV----AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
            E  +       +    N        +   +        +  ++          A +   
Sbjct: 74  SEAEVMVNGGIKDILIANQVIESGKINLLAELARRADIKVAVDSYQNCENLSRIAVEHGV 133

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK-----S 171
            IG+ +   +                L ++ +     E + V G       + +      
Sbjct: 134 TIGVLVEMDIG-LGRCGVKSFDEGINLVQEIQKLDNLEFRGVMGYEGPFRDKTQSEKSDM 192

Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGG-GIHFTDKDYPVKDFCQRLKEFSEKYSVQIY 230
                + +  +++       Q+E +S G  G      +YP     Q       +      
Sbjct: 193 VKESLSRVVQLKRRIEQENIQVEIVSCGSTGTWDITGNYPEITEIQAGTYPLMEVPYLED 252

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA 290
             P             + L +   + +       ++  +      Q    +     P   
Sbjct: 253 GLP-----------FKSALSVLATVISKSHDKLILDCGLKAVTDDQGIPKLMDYDSP--- 298

Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323
            + G       I    H  + ++IGD+I     
Sbjct: 299 -IVG-INEEHSIVEIDHETEKLEIGDKIRILPA 329


>gi|156046673|ref|XP_001589715.1| hypothetical protein SS1G_09437 [Sclerotinia sclerotiorum 1980]
 gi|154693832|gb|EDN93570.1| hypothetical protein SS1G_09437 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 135

 Score = 49.8 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 38/132 (28%), Gaps = 1/132 (0%)

Query: 36  LKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD 94
           +KC +   + + L Q   G   +S+ E+           +  +    K  E  A      
Sbjct: 3   VKCNSDTVLLNVLMQLGAGFDCASVEEMHTVLSLGTHPSSINFANPCKAPESLAFAYKVG 62

Query: 95  TIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE 154
                  +       K    + ++ LRI  + S +   L D              +    
Sbjct: 63  IRKTTFDNLDELDNIKKYMPNAQLLLRIYANDSSAVVSLGDKYGAPLESCHALLVRAREL 122

Query: 155 IKNVNGLMFHNN 166
             +V G  FH  
Sbjct: 123 GMDVVGTTFHIG 134


>gi|221326260|gb|ACM17009.1| arginine decarboxylase [Solanum arcanum]
 gi|221326262|gb|ACM17010.1| arginine decarboxylase [Solanum arcanum]
          Length = 222

 Score = 49.8 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 45  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152
           L+   D ++K+     IGLR      +S       +    + G      + 
Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFG-STSGETGKFGLTTTQILR 214


>gi|220904174|ref|YP_002479486.1| arginine decarboxylase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219868473|gb|ACL48808.1| arginine decarboxylase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 638

 Score = 49.8 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 45/291 (15%), Positives = 80/291 (27%), Gaps = 47/291 (16%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLL----ALKCFAAWGMFDTLNQYMD----GTTSSS 59
           ++D  ++ N  ++     KN G          +K      + + + Q+      G    S
Sbjct: 74  ILD-SRIANIHESFRKAIKNLGYTGAYRGVFPIKVNQQQQVVEKIAQFGAQYHHGLEVGS 132

Query: 60  LYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK--------FKDK 110
             E++         E       YKD E   +      + FN    L           + K
Sbjct: 133 KAELIAAVSLMQDREACIVCNGYKDEEFMDLGLQALRMGFNVFFVLEMPSELNVLLERSK 192

Query: 111 AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI--------ESEIKNVNGLM 162
           A  +   IG+R   +V        D     S  G      +           +     L 
Sbjct: 193 ALGVRPNIGVRAKLAVKAGGH-WTDSGGERSTFGLSPAQVVDVVDTLKSHDMLDCFKLLH 251

Query: 163 FHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------------ 207
           +H   +    +           +          + ++ LGGG+                 
Sbjct: 252 YHLGSQVSNIRDIRTGVMEGARLYVGLIQEGAPMGYLDLGGGLAVDYDGSHTNFISSRNY 311

Query: 208 --DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISE 253
             D    D  + +    ++       I  E G A V   + L   VLD+S 
Sbjct: 312 NLDEYCTDVVETIMSILDEENVPHPHIITESGRATVAYYSVLLFNVLDVSM 362


>gi|89899781|ref|YP_522252.1| alanine racemase-like protein [Rhodoferax ferrireducens T118]
 gi|89344518|gb|ABD68721.1| alanine racemase-like [Rhodoferax ferrireducens T118]
          Length = 379

 Score = 49.8 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 26/210 (12%), Positives = 66/210 (31%), Gaps = 12/210 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSL 60
           ++TP  ++D+ ++  N++      +  GV     +K      +   L +   D  T S+L
Sbjct: 9   LETPALILDEARMDRNIERMRSHLRRLGVSFRPHVKTNKCIDVARRLLETPQDPITVSTL 68

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT-----IIFNTVSQLNKFKDKAQKLH 115
            E        G +   Y V     ++D V++  D      ++ +++       ++A+   
Sbjct: 69  LEAEY-FAAHGVKDILYAVCIAPNKLDHVMALQDKGVRLSLLLDSMETTRLLAERARATR 127

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN-----K 170
           +   + I       +  +         +G   +         +       +C +      
Sbjct: 128 RHFDVLIEIDSDGHRSGVTPDASELVEIGLFLESAGIPVKGVLTHAGSSYDCASIEAIRA 187

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGG 200
                 A +    +           +S+G 
Sbjct: 188 MAEQERAAVVLAAQRLRAAGIACPVVSMGS 217


>gi|90410123|ref|ZP_01218140.1| biosynthetic arginine decarboxylase [Photobacterium profundum 3TCK]
 gi|90329476|gb|EAS45733.1| biosynthetic arginine decarboxylase [Photobacterium profundum 3TCK]
          Length = 640

 Score = 49.8 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 40/298 (13%), Positives = 81/298 (27%), Gaps = 51/298 (17%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL-------N 49
           P  +     L N +D+       +            +  +K      +   +        
Sbjct: 61  PVLVRFPDILQNRVDSLCSAFNQSIESYDYQNSYLAVYPIKVNQQQAVVSEILKSQYAKQ 120

Query: 50  QYMDGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
           Q   G  + S  E+M  L   +        N       I        L +   I+   +S
Sbjct: 121 QRQLGLEAGSKPELMAVLAMAQEASSVIVCNGYKDREYIRLALIGEKLGHEVYIVLEKMS 180

Query: 103 QLNKFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKI--------ES 153
           +LN   ++A++L     L +     S  K          S+ G      +          
Sbjct: 181 ELNIILEEAKQLGVTPRLGLRARLASQGKGKWQSSGGEKSKFGLCASQVLTVIDLLRERD 240

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207
            +  +  L FH   +    +           I  E       I  + +GGG+    +   
Sbjct: 241 MLGCLQLLHFHLGSQLANIRDVRNGVGEAGRIYAELKKMGVGITTVDVGGGLAIDYEGTR 300

Query: 208 -------DYPVKDFCQRLKEFSEKYSVQI-------YLEPGEAIVTNTTTLNTTVLDI 251
                  +Y + ++   +        ++          E G  +  +   L T V+ +
Sbjct: 301 SQSSCSMNYNLSEYANNVVYTLGDVCIEYDIAMPRIISESGRNLTAHHAVLITDVIGV 358


>gi|331005656|ref|ZP_08329023.1| Biosynthetic arginine decarboxylase [gamma proteobacterium
           IMCC1989]
 gi|330420514|gb|EGG94813.1| Biosynthetic arginine decarboxylase [gamma proteobacterium
           IMCC1989]
          Length = 655

 Score = 49.8 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 87/306 (28%), Gaps = 48/306 (15%)

Query: 11  KQKLLNNLD----TALYIRKNAGVKLLL----ALKCFAAWGMFDTLNQYM----DGTTSS 58
           +  L + +           K    K        +K      + + ++ +      G  + 
Sbjct: 74  ENLLDHRISCLNIAFADAIKTLDYKSHYRGVFPIKVNQQHHVIEEISHFGGHYNHGLEAG 133

Query: 59  SLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLN------KFKDKA 111
           S  E+++        + +     YKD E   +  +   +       +          +++
Sbjct: 134 SKAELIIALSHITDNDAYIICNGYKDSEFIDLGLHAIKLGVKCFFVIETPSELPIIIERS 193

Query: 112 QKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLM 162
           ++L  K  L +     S      +D +   S  G      +           +  +  L 
Sbjct: 194 RELGVKPLLGVRLKLASKVDGHWSDDSGDRSIFGLNTMQLMRLIEQLTESKLLDCLQLLH 253

Query: 163 FHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------------ 207
           FH   +    ++             E       +++I LGGG+                 
Sbjct: 254 FHLGSQLPNIRNIRSGMLEACRYYIELVQEGVPLQYIDLGGGLAVDYDGSQSNNTHSMNY 313

Query: 208 --DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVD 262
             +    D  + + E  E +      I  E G A V  ++ L   +LD+S      +   
Sbjct: 314 SLNEYCVDIVESIIEALEPHNIPHPVIITESGRATVAYSSVLLFNILDVSHFDPQPLPEH 373

Query: 263 SSVEAH 268
            S   H
Sbjct: 374 LSASQH 379


>gi|221325954|gb|ACM16856.1| arginine decarboxylase [Solanum chilense]
          Length = 222

 Score = 49.8 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 45  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVAIKLQLNTVIVLEQEEE 164

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152
           L+   D ++K+     IGLR      +S    +       + G      + 
Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214


>gi|163751586|ref|ZP_02158807.1| arginine decarboxylase [Shewanella benthica KT99]
 gi|161328498|gb|EDP99652.1| arginine decarboxylase [Shewanella benthica KT99]
          Length = 637

 Score = 49.8 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 89/306 (29%), Gaps = 55/306 (17%)

Query: 1   MIKT----PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTL 48
           M+K+    P  +   Q L + + +  +            +   L+  +K      + + +
Sbjct: 53  MVKSGVALPVLVRFPQILHHRVHSICHAFNLAIQKYQYESDYLLVYPIKVNQQKTVVEEI 112

Query: 49  -----NQYM--DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEID------AVLSNCD 94
                ++ +   G  + S  E+M          +      YKD E          L +  
Sbjct: 113 LASQKSKEVPQLGLEAGSKPELMAVLAMAQKASSVIICNGYKDVEYIRLALIGEKLGHKV 172

Query: 95  TIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI-- 151
            I+   +S+L     +A+ L     L +   +++        +     + G      +  
Sbjct: 173 YIVLEKLSELKSILQEAKNLGVTPRLGLRVRLAFQGKGKWQASGGEKSKFGLSAAQVLTV 232

Query: 152 ------ESEIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGI 202
                 E+ +  +  L FH   +    +      +       E     T ++   +GGG+
Sbjct: 233 IESLKDENMLDCLQLLHFHLGSQIANIRDIRQGVSEASRFYCELQKLGTNVKCFDVGGGL 292

Query: 203 HFTDK--------------DYPVKDFCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLN 245
                                   +    L +  ++Y   +     E G  +  +   L 
Sbjct: 293 AVDYDGTRSQSSNSMNYGLTEYANNIVSVLTDICKEYQQPMPQIISESGRYLTAHHAVLI 352

Query: 246 TTVLDI 251
           + V+  
Sbjct: 353 SDVIGT 358


>gi|320156083|ref|YP_004188462.1| biosynthetic arginine decarboxylase [Vibrio vulnificus MO6-24/O]
 gi|319931395|gb|ADV86259.1| biosynthetic arginine decarboxylase [Vibrio vulnificus MO6-24/O]
          Length = 636

 Score = 49.4 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/316 (11%), Positives = 80/316 (25%), Gaps = 51/316 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +   Q L   + +       A           L+  +K      + D +        
Sbjct: 61  PVLVRFPQILHQRVHSICDAFNQAIEEYQYPNKYLLVYPIKVNQQREVVDEILASQAQLE 120

Query: 54  ----GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
               G  + S  E++  L   +        N       I        L +   I+   +S
Sbjct: 121 TKQLGLEAGSKPELLAVLAMAQHASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKMS 180

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------S 153
           +L+    +A+ L     L I   ++         +     + G      +         +
Sbjct: 181 ELDLVLREAKSLGVTPRLGIRIRLASQGAGKWQASGGEKSKFGLSASQVLNVISRLKKEN 240

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207
           ++  +  + FH   +    +              E       I +  +GGG+        
Sbjct: 241 QLDTLQLVHFHLGSQMANIRDVRNGVNESARFYCELRTLGANITYFDVGGGLAIDYDGTR 300

Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISE 253
                          ++    + +  + Y   +     E G ++  +   L + V+    
Sbjct: 301 SQSSNSMNYGLVEYARNIVNTVGDVCKDYKQPMPVIISESGRSLTAHHAVLISNVIGTET 360

Query: 254 NIKNLVIVDSSVEAHV 269
                V         +
Sbjct: 361 YKPETVTEPEEDFPLL 376


>gi|297787810|pdb|3N2O|A Chain A, X-Ray Crystal Structure Of Arginine Decarboxylase
           Complexed Arginine From Vibrio Vulnificus
 gi|297787811|pdb|3N2O|B Chain B, X-Ray Crystal Structure Of Arginine Decarboxylase
           Complexed Arginine From Vibrio Vulnificus
 gi|297787812|pdb|3N2O|C Chain C, X-Ray Crystal Structure Of Arginine Decarboxylase
           Complexed Arginine From Vibrio Vulnificus
 gi|297787813|pdb|3N2O|D Chain D, X-Ray Crystal Structure Of Arginine Decarboxylase
           Complexed Arginine From Vibrio Vulnificus
          Length = 648

 Score = 49.4 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/316 (11%), Positives = 80/316 (25%), Gaps = 51/316 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +   Q L   + +       A           L+  +K      + D +        
Sbjct: 65  PVLVRFPQILHQRVHSICDAFNQAIEEYQYPNKYLLVYPIKVNQQREVVDEILASQAQLE 124

Query: 54  ----GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
               G  + S  E++  L   +        N       I        L +   I+   +S
Sbjct: 125 TKQLGLEAGSKPELLAVLAMAQHASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKMS 184

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------S 153
           +L+    +A+ L     L I   ++         +     + G      +         +
Sbjct: 185 ELDLVLREAKSLGVTPRLGIRIRLASQGAGKWQASGGEKSKFGLSASQVLNVISRLKKEN 244

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207
           ++  +  + FH   +    +              E       I +  +GGG+        
Sbjct: 245 QLDTLQLVHFHLGSQMANIRDVRNGVNESARFYCELRTLGANITYFDVGGGLAIDYDGTR 304

Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISE 253
                          ++    + +  + Y   +     E G ++  +   L + V+    
Sbjct: 305 SQSSNSMNYGLVEYARNIVNTVGDVCKDYKQPMPVIISESGRSLTAHHAVLISNVIGTET 364

Query: 254 NIKNLVIVDSSVEAHV 269
                V         +
Sbjct: 365 YKPETVTEPEEDFPLL 380


>gi|37680170|ref|NP_934779.1| arginine decarboxylase [Vibrio vulnificus YJ016]
 gi|326423989|ref|NP_761203.2| arginine decarboxylase [Vibrio vulnificus CMCP6]
 gi|46397728|sp|Q7MK24|SPEA_VIBVY RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|37198916|dbj|BAC94750.1| arginine decarboxylase [Vibrio vulnificus YJ016]
 gi|319999367|gb|AAO10730.2| arginine decarboxylase [Vibrio vulnificus CMCP6]
          Length = 640

 Score = 49.4 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/316 (11%), Positives = 80/316 (25%), Gaps = 51/316 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +   Q L   + +       A           L+  +K      + D +        
Sbjct: 65  PVLVRFPQILHQRVHSICDAFNQAIEEYQYPNKYLLVYPIKVNQQREVVDEILASQAQLE 124

Query: 54  ----GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
               G  + S  E++  L   +        N       I        L +   I+   +S
Sbjct: 125 TKQLGLEAGSKPELLAVLAMAQHASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKMS 184

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------S 153
           +L+    +A+ L     L I   ++         +     + G      +         +
Sbjct: 185 ELDLVLREAKSLGVTPRLGIRIRLASQGAGKWQASGGEKSKFGLSASQVLNVISRLKKEN 244

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207
           ++  +  + FH   +    +              E       I +  +GGG+        
Sbjct: 245 QLDTLQLVHFHLGSQMANIRDVRNGVNESARFYCELRTLGANITYFDVGGGLAIDYDGTR 304

Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISE 253
                          ++    + +  + Y   +     E G ++  +   L + V+    
Sbjct: 305 SQSSNSMNYGLVEYARNIVNTVGDVCKDYKQPMPVIISESGRSLTAHHAVLISNVIGTET 364

Query: 254 NIKNLVIVDSSVEAHV 269
                V         +
Sbjct: 365 YKPETVTEPEEDFPLL 380


>gi|113969899|ref|YP_733692.1| arginine decarboxylase [Shewanella sp. MR-4]
 gi|114047134|ref|YP_737684.1| arginine decarboxylase [Shewanella sp. MR-7]
 gi|123030693|sp|Q0HW78|SPEA_SHESR RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|123130514|sp|Q0HJY2|SPEA_SHESM RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|113884583|gb|ABI38635.1| arginine decarboxylase [Shewanella sp. MR-4]
 gi|113888576|gb|ABI42627.1| arginine decarboxylase [Shewanella sp. MR-7]
          Length = 637

 Score = 49.4 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 37/324 (11%), Positives = 78/324 (24%), Gaps = 55/324 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +   Q L + +++       A           L+  +K      + + +        
Sbjct: 61  PVLVRFPQILHHRVNSLCQAFDQAIQKYEYQADYLLVYPIKVNQQKTVVEEILASQASKE 120

Query: 54  ----GTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK 108
               G  + S  E+M          +      YKD E   +    + +       L K  
Sbjct: 121 VPQLGLEAGSKPELMAVLAMAQKASSVIVCNGYKDNEYIRLALIGEKLGHKVYIVLEKLS 180

Query: 109 DKAQKLHKKIGLRINPSVS-------YSKFILADPNRPFSRLGEKCKDKI--------ES 153
           +    L +   L + P +          K          S+ G      +          
Sbjct: 181 ELKMVLAESKRLGVKPRLGLRARLAFQGKGKWQASGGEKSKFGLSAAQILTVVDQLKEND 240

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207
            + ++  L FH   +    +      +       E       I    +GGG+        
Sbjct: 241 MLDSLQLLHFHLGSQIANIRDIRQGVSEAARFYCELRELGASINCFDVGGGLAVDYDGTR 300

Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISE 253
                           +    L +   +Y   +     E G  +  +   L T V+    
Sbjct: 301 SQSNNSMNYGLSEYANNIVNVLTDICNEYEQPMPRIISESGRHLTAHHAVLITDVIGTEA 360

Query: 254 NIKNLVIVDSSVE----AHVPDYL 273
                +   +        ++    
Sbjct: 361 YQVEDIQPPAEESPQLLHNMWQSW 384


>gi|24373435|ref|NP_717478.1| arginine decarboxylase [Shewanella oneidensis MR-1]
 gi|48474856|sp|Q8EFU5|SPEA_SHEON RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|24347716|gb|AAN54922.1|AE015630_4 biosynthetic arginine decarboxylase [Shewanella oneidensis MR-1]
          Length = 637

 Score = 49.4 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 37/324 (11%), Positives = 77/324 (23%), Gaps = 55/324 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +   Q L + +++       A           L+  +K      + + +        
Sbjct: 61  PVLVRFPQILHHRVNSLCQAFDQAIQKYEYQADYLLVYPIKVNQQKTVVEEILASQASKE 120

Query: 54  ----GTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK 108
               G  + S  E+M          +      YKD E   +    + +       L K  
Sbjct: 121 VPQLGLEAGSKPELMAVLAMAQKASSVIVCNGYKDNEYIRLALIGEKLGHKVYIVLEKLS 180

Query: 109 DKAQKLHKKIGLRINPSVS-------YSKFILADPNRPFSRLGEKCKDKIE--------S 153
           +    L +   L + P +          K          S+ G      +          
Sbjct: 181 ELKMVLAESKRLGVKPRLGLRARLAFQGKGKWQASGGEKSKFGLSAAQILTVVDQLKQSD 240

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207
            + ++  L FH   +    +      +       E       I    +GGG+        
Sbjct: 241 MLDSLQLLHFHLGSQIANIRDIRQGVSEAARFYCELRELGASINCFDVGGGLAVDYDGTR 300

Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISE 253
                           +    L +   +Y   +     E G  +  +   L T V+    
Sbjct: 301 SQSNNSMNYGLSEYANNIVNVLTDICNEYEQPMPRIISESGRHLTAHHAVLITDVIGTEA 360

Query: 254 NIKNLVIVDSSVE----AHVPDYL 273
                +            ++    
Sbjct: 361 YQVEDIQPPEEESPQLLHNMWQSW 384


>gi|73950479|ref|XP_544447.2| PREDICTED: similar to Ornithine decarboxylase (ODC) [Canis
           familiaris]
          Length = 165

 Score = 49.4 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 16/164 (9%), Positives = 33/164 (20%), Gaps = 24/164 (14%)

Query: 26  KNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVAYKDC 84
               V      KC ++  +   L     G   +S  E+              Y    K  
Sbjct: 18  APPRVLPFYVEKCNSSAWVLHVLASLGTGFDCASQLELEQVRGLGAAPSHIIYANPCKPV 77

Query: 85  EIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLG 144
                L     +++            + K    +           + +L           
Sbjct: 78  SHIHTLPATGLVLWLWTQDNESILPLSAKFGAPL--------DVCEHLLG---------- 119

Query: 145 EKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH 188
                        V G  FH     ++       + +  +    
Sbjct: 120 -----LARDLGLAVVGTSFHVGSHCQAAHSSMQAIADCRRVLEM 158


>gi|196018615|ref|XP_002118839.1| hypothetical protein TRIADDRAFT_9870 [Trichoplax adhaerens]
 gi|190578025|gb|EDV18675.1| hypothetical protein TRIADDRAFT_9870 [Trichoplax adhaerens]
          Length = 54

 Score = 49.4 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 17/54 (31%), Gaps = 1/54 (1%)

Query: 35 ALKCFAAWGMFDTLNQYMDGTTSSSLYEVM-LGHEKFGGETHAYNVAYKDCEID 87
          A+KC     +  TL         +SL E+  + +     +   Y    K     
Sbjct: 1  AMKCNNDPVLLRTLINLGVSFDCASLGEIQSIINAGVNPDRIIYANTIKAISHL 54


>gi|221326330|gb|ACM17044.1| arginine decarboxylase [Solanum huaylasense]
          Length = 222

 Score = 49.4 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 11/76 (14%), Positives = 25/76 (32%), Gaps = 12/76 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 45  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104

Query: 56  ---TSSSLYEVMLGHE 68
               + S  E++L   
Sbjct: 105 FGLEAGSKPELLLAMS 120


>gi|237807154|ref|YP_002891594.1| arginine decarboxylase [Tolumonas auensis DSM 9187]
 gi|259511348|sp|C4L9A9|SPEA_TOLAT RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|237499415|gb|ACQ92008.1| arginine decarboxylase [Tolumonas auensis DSM 9187]
          Length = 635

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/266 (11%), Positives = 74/266 (27%), Gaps = 33/266 (12%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD-- 53
           TP  L     +   ++      + A          + +  +K      + +++ +     
Sbjct: 60  TPVLLRFPDIIKTRINALFGAFEQAIQSYGYKGRYQCVYPIKVNQQNQVIESVTRAFADK 119

Query: 54  ---GTTSSSLYEVMLGHEKFG--GETHAYNVAYKDCEIDAV-----LSNCDTIIFNTVSQ 103
              G  + S  E++         G     N       +        L +   I+    S+
Sbjct: 120 PALGLEAGSKPELLAVLSHHHDLGSVIVCNGYKDREYVRHALLGSLLGHHVYIVVEKPSE 179

Query: 104 LNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SE 154
           L    D+A +L+    + +   ++         +     + G      +          +
Sbjct: 180 LELILDEAARLNITPRIGVRARLASQGSGKWQASGGEKSKFGLNAAQILRLVERLREADK 239

Query: 155 IKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
           +  +  + FH   +    +              E  H    IE + +GGG+    +    
Sbjct: 240 LDCLQLVHFHLGSQIANIRDIQGGIRECGRFYAELRHLGANIEVVDVGGGLGVDYEGSRS 299

Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAI 237
           +  C        +Y+  +    G+  
Sbjct: 300 QSHCSA-NYNLREYANNVVWGIGDVC 324


>gi|307305223|ref|ZP_07584971.1| arginine decarboxylase [Shewanella baltica BA175]
 gi|306911526|gb|EFN41951.1| arginine decarboxylase [Shewanella baltica BA175]
          Length = 637

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/324 (11%), Positives = 79/324 (24%), Gaps = 51/324 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +   Q L + +++       A           L+  +K      + + +        
Sbjct: 61  PVLVRFPQILHHRVNSLCQAFDQAIQKYEYQADYLLVYPIKVNQQQTVVEEILASQASKE 120

Query: 54  ----GTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK 108
               G  + S  E+M          +      YKD E   +    + +       L K  
Sbjct: 121 VPQLGLEAGSKPELMAVLAMAQKASSVIVCNGYKDNEYIRLALIGEKLGHKVYIVLEKLS 180

Query: 109 DKAQKLHKKIGLRINPSVS-------YSKFILADPNRPFSRLGEKCKDKI--------ES 153
           +    L +   L + P +          K          S+ G      +          
Sbjct: 181 ELKMVLAESKRLGVTPRLGLRARLAFQGKGKWQASGGEKSKFGLSAAQILLVVEQLKQND 240

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207
            + ++  L FH   +    +      +       E       +    +GGG+        
Sbjct: 241 MLDSLQLLHFHLGSQIANIRDIRQGVSEAGRFYCELRALGASVNCFDVGGGLAVDYDGTR 300

Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISE 253
                           +    L +   +Y   +     E G  +  +   L T V+    
Sbjct: 301 SQSNNSMNYGLTEYANNIVNVLTDICNEYEQPMPRIISESGRYLTAHHAVLITDVIGTEA 360

Query: 254 NIKNLVIVDSSVEAHVPDYLLYQE 277
                +   +     +   + +  
Sbjct: 361 YQPEDIQPPAEESPQLLHNMWHSW 384


>gi|160874920|ref|YP_001554236.1| arginine decarboxylase [Shewanella baltica OS195]
 gi|189046766|sp|A9KY70|SPEA_SHEB9 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|160860442|gb|ABX48976.1| arginine decarboxylase [Shewanella baltica OS195]
 gi|315267156|gb|ADT94009.1| arginine decarboxylase [Shewanella baltica OS678]
          Length = 637

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/324 (11%), Positives = 79/324 (24%), Gaps = 51/324 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +   Q L + +++       A           L+  +K      + + +        
Sbjct: 61  PVLVRFPQILHHRVNSLCQAFDQAIQKYEYQADYLLVYPIKVNQQQTVVEEILASQASKE 120

Query: 54  ----GTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK 108
               G  + S  E+M          +      YKD E   +    + +       L K  
Sbjct: 121 VPQLGLEAGSKPELMAVLAMAQKASSVIVCNGYKDNEYIRLALIGEKLGHKVYIVLEKLS 180

Query: 109 DKAQKLHKKIGLRINPSVS-------YSKFILADPNRPFSRLGEKCKDKI--------ES 153
           +    L +   L + P +          K          S+ G      +          
Sbjct: 181 ELKMVLAESKRLGVTPRLGLRARLAFQGKGKWQASGGEKSKFGLSAAQILLVVEQLKQND 240

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207
            + ++  L FH   +    +      +       E       +    +GGG+        
Sbjct: 241 MLDSLQLLHFHLGSQIANIRDIRQGVSEAGRFYCELRALGASVNCFDVGGGLAVDYDGTR 300

Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISE 253
                           +    L +   +Y   +     E G  +  +   L T V+    
Sbjct: 301 SQSNNSMNYGLTEYANNIVNVLTDICNEYEQPMPRIISESGRYLTAHHAVLITDVIGTEA 360

Query: 254 NIKNLVIVDSSVEAHVPDYLLYQE 277
                +   +     +   + +  
Sbjct: 361 YQPEDIQPPAEESPQLLHNMWHSW 384


>gi|126173995|ref|YP_001050144.1| arginine decarboxylase [Shewanella baltica OS155]
 gi|153000286|ref|YP_001365967.1| arginine decarboxylase [Shewanella baltica OS185]
 gi|217973683|ref|YP_002358434.1| arginine decarboxylase [Shewanella baltica OS223]
 gi|304411455|ref|ZP_07393069.1| arginine decarboxylase [Shewanella baltica OS183]
 gi|166220855|sp|A3D3G2|SPEA_SHEB5 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|166220856|sp|A6WM65|SPEA_SHEB8 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|254772920|sp|B8EAI2|SPEA_SHEB2 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|125997200|gb|ABN61275.1| arginine decarboxylase [Shewanella baltica OS155]
 gi|151364904|gb|ABS07904.1| arginine decarboxylase [Shewanella baltica OS185]
 gi|217498818|gb|ACK47011.1| arginine decarboxylase [Shewanella baltica OS223]
 gi|304350310|gb|EFM14714.1| arginine decarboxylase [Shewanella baltica OS183]
          Length = 637

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/324 (11%), Positives = 79/324 (24%), Gaps = 51/324 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +   Q L + +++       A           L+  +K      + + +        
Sbjct: 61  PVLVRFPQILHHRVNSLCQAFDQAIQKYEYQADYLLVYPIKVNQQQTVVEEILASQASKE 120

Query: 54  ----GTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK 108
               G  + S  E+M          +      YKD E   +    + +       L K  
Sbjct: 121 VPQLGLEAGSKPELMAVLAMAQKASSVIVCNGYKDNEYIRLALIGEKLGHKVYIVLEKLS 180

Query: 109 DKAQKLHKKIGLRINPSVS-------YSKFILADPNRPFSRLGEKCKDKI--------ES 153
           +    L +   L + P +          K          S+ G      +          
Sbjct: 181 ELKMVLAESKRLGVTPRLGLRARLAFQGKGKWQASGGEKSKFGLSAAQILLVVEQLKQND 240

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207
            + ++  L FH   +    +      +       E       +    +GGG+        
Sbjct: 241 MLDSLQLLHFHLGSQIANIRDIRQGVSEAGRFYCELRALGASVNCFDVGGGLAVDYDGTR 300

Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISE 253
                           +    L +   +Y   +     E G  +  +   L T V+    
Sbjct: 301 SQSNNSMNYGLTEYANNIVNVLTDICNEYEQPMPRIISESGRYLTAHHAVLITDVIGTEA 360

Query: 254 NIKNLVIVDSSVEAHVPDYLLYQE 277
                +   +     +   + +  
Sbjct: 361 YQPEDIQPPAEESPQLLHNMWHSW 384


>gi|213410262|ref|XP_002175901.1| conserved hypothetical protein [Schizosaccharomyces japonicus
           yFS275]
 gi|212003948|gb|EEB09608.1| conserved hypothetical protein [Schizosaccharomyces japonicus
           yFS275]
          Length = 408

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 50/171 (29%), Gaps = 6/171 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSS-L 60
           I TP +++D++ + NN D  L   +  G      +K        D   Q        S +
Sbjct: 31  IPTPAFVVDQKVVKNNCDEMLKSIEATGALFRPHVKTHKCIEAMDLQLQGRVNAVVVSTI 90

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSN-----CDTIIFNTVSQLNKFKDKAQKLH 115
            E +        +   Y +      ++ +           ++ + ++ ++  K  AQK  
Sbjct: 91  REAIAVVASGKVDDILYGLPVCRSRLEELYELSKNVKSVRLLIDNLAHIDILKQFAQKHS 150

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNN 166
            K    +   +                          S I N+ G   H  
Sbjct: 151 IKRPFSVFIKIDMGTSRAGLQVGSPELQDLIDTTLNASGIINLFGFYCHAG 201


>gi|260060980|ref|YP_003194060.1| arginine decarboxylase [Robiginitalea biformata HTCC2501]
 gi|88785112|gb|EAR16281.1| arginine decarboxylase [Robiginitalea biformata HTCC2501]
          Length = 487

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/406 (11%), Positives = 103/406 (25%), Gaps = 59/406 (14%)

Query: 3   KTPY-YLIDKQKLLNNLDTALYIRKNAGVKL--------LLALKCFAAWGMFDTLNQYMD 53
            +P  +     K+  N++ A      A  K             K      +     +   
Sbjct: 42  GSPLKFTY-LPKISQNINRAKDWFAEAMEKHDYPGKYYYCYCTKSSHFRYVLHEALKNDI 100

Query: 54  GTTSSSLY-----EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK 108
              +SS +     E +         T+     +K      V +    I     + +    
Sbjct: 101 HIETSSAFDIDIVENLKAQGLISDRTYVICNGFK--REAYVDNIGRLINEGHRNCIPIID 158

Query: 109 DK--------AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKC--KDKIESEIKNV 158
           +               K+G+RI                   +           +++   +
Sbjct: 159 NYEELSLLDEVIDQPFKVGIRIASEEEPKFEFYTSRLGIGYKDIVPFYENQIRDNDKVEL 218

Query: 159 NGLMFHNNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIH----------FT 205
             L F  N   +    +   L                ++ +++GGG            + 
Sbjct: 219 RMLHFFINTGIRDNAYYWNELNKCLKVYVRLKKLCPSLDSLNIGGGFPTKNSLSFQYDYA 278

Query: 206 DKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKN--LVIVDS 263
                + +  +   E  +     I+ E G   V  +      VL   +        ++DS
Sbjct: 279 YMVDEIVNQIKLTCEEGDVPPPNIFTEFGSFTVGESGGAVYKVLYQKQQNDREKWNMIDS 338

Query: 264 SVEAHVPDYLLYQESATI----YPNTGPYTAMVCGRSCLAGDIF-----GEFHFEKPVKI 314
           S    +PD     +   +      +      ++ G +C + D +         +      
Sbjct: 339 SFITTLPDSWAINKRFIMLSVNRWDDPYERVLLGGLTCDSDDYYNSQQDMNAIYLPKFHS 398

Query: 315 GD--RISFEDVAGYNINRKNWFNG-----INMPTIAVKNVDGTIKA 353
           G    I F +   Y       F G     I  P   + + +   + 
Sbjct: 399 GKPLYIGFFNTGAYQETIG-GFGGLHHCLIPQPKHLLIDREENGEV 443


>gi|117920071|ref|YP_869263.1| arginine decarboxylase [Shewanella sp. ANA-3]
 gi|166220859|sp|A0KVN8|SPEA_SHESA RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|117612403|gb|ABK47857.1| arginine decarboxylase [Shewanella sp. ANA-3]
          Length = 637

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/302 (12%), Positives = 75/302 (24%), Gaps = 51/302 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +   Q L + +++       A           L+  +K      + + +        
Sbjct: 61  PVLVRFPQILHHRVNSLCQAFDQAIQKYEYQADYLLVYPIKVNQQKTVVEEILASQASKE 120

Query: 54  ----GTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK 108
               G  + S  E+M          +      YKD E   +    + +       L K  
Sbjct: 121 VPQLGLEAGSKPELMAVLAMAQKASSVIVCNGYKDNEYIRLALIGEKLGHKVYIVLEKLS 180

Query: 109 DKAQKLHKKIGLRINPSVS-------YSKFILADPNRPFSRLGEKCKDKI--------ES 153
           +    L +   L + P +          K          S+ G      +        E 
Sbjct: 181 ELKMVLAESKRLGVKPRLGLRARLAFQGKGKWQASGGEKSKFGLSAAQILTVVDQLKQED 240

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207
            + ++  L FH   +    +      +       E       I    +GGG+        
Sbjct: 241 MLDSLQLLHFHLGSQIANIRDIRQGVSEAARFYCELRELGASINCFDVGGGLAVDYDGTR 300

Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISE 253
                           +    L +   +Y   +     E G  +  +   L T V+    
Sbjct: 301 SQSNNSMNYGLSEYANNIVNVLTDICNEYEQPMPRIISESGRHLTAHHAVLITDVIGTEA 360

Query: 254 NI 255
             
Sbjct: 361 YQ 362


>gi|260769401|ref|ZP_05878334.1| biosynthetic arginine decarboxylase [Vibrio furnissii CIP 102972]
 gi|260614739|gb|EEX39925.1| biosynthetic arginine decarboxylase [Vibrio furnissii CIP 102972]
 gi|315181932|gb|ADT88845.1| biosynthetic arginine decarboxylase [Vibrio furnissii NCTC 11218]
          Length = 636

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 35/268 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +   Q L   +         A           L+  +K      + D +        
Sbjct: 61  PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQKEVVDEILASQAELE 120

Query: 54  ----GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
               G  + S  E++  L   +        N       +        L +   I+   +S
Sbjct: 121 TKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYMRLALIGEKLGHKVFIVLEKLS 180

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153
           +L+    +A+ L  K  L +   ++         +     + G      +        E 
Sbjct: 181 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVIERLKAEQ 240

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
           ++  +  + FH   +    +              E      QI++  +GGG+        
Sbjct: 241 QLDALQLVHFHLGSQMANIRDVRNGVNEAARFYCELRELGAQIQYFDVGGGLAVDYDG-T 299

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
                  +     +Y+  I    G+   
Sbjct: 300 RSQSSNSMNYGLLEYARNIVNTVGDMCN 327


>gi|149912635|ref|ZP_01901169.1| arginine decarboxylase [Roseobacter sp. AzwK-3b]
 gi|149813041|gb|EDM72867.1| arginine decarboxylase [Roseobacter sp. AzwK-3b]
          Length = 628

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/338 (12%), Positives = 97/338 (28%), Gaps = 38/338 (11%)

Query: 2   IKTPYYL----IDKQKLLNNLDTALYIRKNAGVKLLL----ALKCFAAWGMFDTLNQYM- 52
           I+TP  L      +  +           + +G +        +K      + D +  +  
Sbjct: 56  IQTPMVLRVTSYLEHAIQQINHGFRDAIERSGYRGTYRGVFPIKVNQQAQVVDRIVDFGR 115

Query: 53  ---DGTTSSSLYEVMLGHEK--FGGETHAYNVAYKDCEIDAVLSNCDT-----IIFNTVS 102
               G  + S  E+++              N       +   + +C       I+  +V 
Sbjct: 116 SHDFGLEAGSKPELVIALAHKLARDALIVCNGVKDAEFVGLAIQSCKLGFNTVIVLESVM 175

Query: 103 QLNKFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           +++   + ++ L  +  L +     +      A  +   S  G      +E         
Sbjct: 176 EVDTVIETSRALGTEPMLGVRVKLTNQIGGNWAASSGDRSTFGMNTAQLVEVIDKLRDAG 235

Query: 156 --KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHF---ITQIEWISLGGGIHFTDKDYP 210
               +     H   +          +    + F         +  + LGGG+ F      
Sbjct: 236 LLHCLMLQHSHLGSQVPDVNDVRRSVGEACRYFSEMKAEGAPLTHLDLGGGLGFDYTGE- 294

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVL---DISENIKNLVIVDSSVEA 267
            K     +    E+Y     +E     +      + T++     +    + +++ + +EA
Sbjct: 295 KKASANSINYSIEEYCAN-IVETVGYAMDEAGIDHPTLVTESGRAVAASSSMLIFNVLEA 353

Query: 268 HVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGE 305
            + D     ++     +       V G   L+GD   E
Sbjct: 354 TLFDASEAPDAEPGDHHLVSDLIAVGGY--LSGDRLRE 389


>gi|73973286|ref|XP_852691.1| PREDICTED: similar to Ornithine decarboxylase (ODC) [Canis
           familiaris]
          Length = 194

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 36/122 (29%), Gaps = 4/122 (3%)

Query: 6   YYLID-KQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           +Y+ D +  L  +L           +    A KC     M  TL         ++  ++ 
Sbjct: 42  FYVTDPRDILKKHLRCLK---ALPRLIAFYAAKCNDNRTMVKTLAAIGTVFDFANKTKMQ 98

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
           L    FG E    +V        +  +N +T I         F   A        L I+ 
Sbjct: 99  LQQASFGAEELYIDVISVSFHAGSGCTNPETFIQTISDTCCIFDKGADVGFNMYLLDISG 158

Query: 125 SV 126
             
Sbjct: 159 GF 160


>gi|34391661|gb|AAN77734.1| arginine decarboxylase [Capsicum annuum]
          Length = 409

 Score = 49.4 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/233 (12%), Positives = 73/233 (31%), Gaps = 27/233 (11%)

Query: 27  NAGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLG---HEKFGGETHAYNV 79
           ++  + +  +KC     + + + ++      G  + S  E++L      K   +      
Sbjct: 1   DSHYQGVYPVKCNQDRFVVEDIVKFGSPYRFGLEAGSKPELLLAMNCLSKGSADALLVCN 60

Query: 80  AYKDCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKL--HKKIGLRINPSVSYSKF 131
            +KD E  ++            I+     +L+   D ++K+     IGLR      +S  
Sbjct: 61  GFKDTEYISLALIARKLLLNTVIVLEQEEELDLVIDISRKMAVRPVIGLRAKLRTKHSGH 120

Query: 132 ILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKSFLCFSAMLKNIE 183
             +       + G      +              +  L FH   +  +    +  +    
Sbjct: 121 FGSTSGEKG-KFGLTTTQILRVVKKLEGSGMLDCLQLLHFHIGSQIPTTELLADGVGEAT 179

Query: 184 KEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
           + +         +++I +GGG+          D    +    E+Y+  +    
Sbjct: 180 QIYSELVRLGAGMKFIDIGGGLGIDYDGSKSSDSDVSVAYGIEEYASAVVQAV 232


>gi|56695514|ref|YP_165862.1| arginine decarboxylase [Ruegeria pomeroyi DSS-3]
 gi|56677251|gb|AAV93917.1| arginine decarboxylase [Ruegeria pomeroyi DSS-3]
          Length = 661

 Score = 49.0 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/258 (9%), Positives = 66/258 (25%), Gaps = 29/258 (11%)

Query: 19  DTALYIRKNAGVKLLL----ALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK- 69
           D+       +G K        +K      + D + ++      G  + S  E+++     
Sbjct: 110 DSFADAIARSGYKGAYRGVFPIKVNQQAQVIDRIVEFGHRYSYGLEAGSKPELVIALAHK 169

Query: 70  -FGGETHAYNVAYKDCEIDAVLSNCDT-----IIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                    N       +   + +        I+  +  + +      ++L  +  L + 
Sbjct: 170 LATDALIVCNGVKDAEFVRLAILSRKLGFNTVIVLESPKEADTVIAVYEELGIEPLLGVR 229

Query: 124 PSVSYSKFILADPNRPFS-RLGEKCKDKIES--------EIKNVNGLMFHNNCENKSFLC 174
             ++       + +       G      +           I  +     H   +      
Sbjct: 230 VKLTNQISGKWEESSGDRSSFGMNTDQLVRVVDKLRDAGLIHCLKLQHSHLGSQVPDVND 289

Query: 175 FSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYL 231
               +    + F         +  + LGGG+         +     +    E+Y   +  
Sbjct: 290 VRRAVGEACRYFTELSAEGVPLTHLDLGGGMGVDYTGE-KRATENSINYTVEEYCANVV- 347

Query: 232 EPGEAIVTNTTTLNTTVL 249
           E     +      + T++
Sbjct: 348 ETVAYAMDEAGIDHPTIV 365


>gi|269961366|ref|ZP_06175731.1| biosynthetic arginine decarboxylase [Vibrio harveyi 1DA3]
 gi|269833917|gb|EEZ88011.1| biosynthetic arginine decarboxylase [Vibrio harveyi 1DA3]
          Length = 640

 Score = 49.0 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/253 (11%), Positives = 66/253 (26%), Gaps = 31/253 (12%)

Query: 18  LDTALYIRKN----AGVKLLLALKCFAAWGMFDT-------LNQYMDGTTSSSLYEVM-- 64
                   +         L+  +K      + D        L     G  + S  E++  
Sbjct: 82  CQAFNQAIEEYQYPNKYLLVYPIKVNQQREVVDEILASQAQLENKQLGLEAGSKPELLAV 141

Query: 65  LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           L   + G      N       +        L +   I+   +S+L+   ++A+ L     
Sbjct: 142 LALAQQGSSVIVCNGYKDREYVRLALIGEKLGHKVFIVLEKLSELDLVLEEAKSLGVTPR 201

Query: 120 LRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ESEIKNVNGLMFHNNCE-- 168
           L +   ++         +     + G      +        E ++  +  + FH   +  
Sbjct: 202 LGLRIRLASQGAGKWQASGGEKSKFGLSASQVLSVIERLKREDKLDTMQLVHFHLGSQMA 261

Query: 169 -NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
             +              E       I++  +GGG+               +     +Y+ 
Sbjct: 262 NIRDVRNGVNESARFYCELRAMGANIDYFDVGGGLAVDYDG-TRSQSSNSMNYGLAEYAR 320

Query: 228 QIYLEPGEAIVTN 240
            I    G+     
Sbjct: 321 NIVNTVGDVCQQY 333


>gi|221326156|gb|ACM16957.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|221326158|gb|ACM16958.1| arginine decarboxylase [Solanum pimpinellifolium]
          Length = 222

 Score = 49.0 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 45  PLVVRFPDVLKNRLESLQSAFDYAVQSVGYEAHYQGVYPVKCNQDRFVVEDIVKFGTGFR 104

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152
           L+   D ++K+     IGLR      +S    +       + G      + 
Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214


>gi|221325924|gb|ACM16841.1| arginine decarboxylase [Solanum lycopersicum]
 gi|221325926|gb|ACM16842.1| arginine decarboxylase [Solanum lycopersicum]
 gi|221325928|gb|ACM16843.1| arginine decarboxylase [Solanum lycopersicum]
 gi|221325930|gb|ACM16844.1| arginine decarboxylase [Solanum lycopersicum]
 gi|221326012|gb|ACM16885.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|221326014|gb|ACM16886.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|221326036|gb|ACM16897.1| arginine decarboxylase [Solanum lycopersicum x Solanum
           pimpinellifolium]
 gi|221326038|gb|ACM16898.1| arginine decarboxylase [Solanum lycopersicum x Solanum
           pimpinellifolium]
 gi|221326040|gb|ACM16899.1| arginine decarboxylase [Solanum lycopersicum]
 gi|221326042|gb|ACM16900.1| arginine decarboxylase [Solanum lycopersicum]
 gi|221326048|gb|ACM16903.1| arginine decarboxylase [Solanum lycopersicum]
 gi|221326052|gb|ACM16905.1| arginine decarboxylase [Solanum lycopersicum]
 gi|221326054|gb|ACM16906.1| arginine decarboxylase [Solanum lycopersicum]
 gi|221326056|gb|ACM16907.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|221326058|gb|ACM16908.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|221326060|gb|ACM16909.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|221326062|gb|ACM16910.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|221326064|gb|ACM16911.1| arginine decarboxylase [Solanum lycopersicum]
 gi|221326066|gb|ACM16912.1| arginine decarboxylase [Solanum lycopersicum]
 gi|221326092|gb|ACM16925.1| arginine decarboxylase [Solanum lycopersicum]
 gi|221326094|gb|ACM16926.1| arginine decarboxylase [Solanum lycopersicum]
 gi|221326096|gb|ACM16927.1| arginine decarboxylase [Solanum cheesmaniae]
 gi|221326098|gb|ACM16928.1| arginine decarboxylase [Solanum cheesmaniae]
 gi|221326100|gb|ACM16929.1| arginine decarboxylase [Solanum cheesmaniae]
 gi|221326102|gb|ACM16930.1| arginine decarboxylase [Solanum cheesmaniae]
 gi|221326104|gb|ACM16931.1| arginine decarboxylase [Solanum cheesmaniae]
 gi|221326106|gb|ACM16932.1| arginine decarboxylase [Solanum cheesmaniae]
 gi|221326108|gb|ACM16933.1| arginine decarboxylase [Solanum cheesmaniae]
 gi|221326110|gb|ACM16934.1| arginine decarboxylase [Solanum cheesmaniae]
 gi|221326112|gb|ACM16935.1| arginine decarboxylase [Solanum cheesmaniae]
 gi|221326114|gb|ACM16936.1| arginine decarboxylase [Solanum cheesmaniae]
 gi|221326116|gb|ACM16937.1| arginine decarboxylase [Solanum cheesmaniae]
 gi|221326118|gb|ACM16938.1| arginine decarboxylase [Solanum cheesmaniae]
 gi|221326120|gb|ACM16939.1| arginine decarboxylase [Solanum cheesmaniae]
 gi|221326122|gb|ACM16940.1| arginine decarboxylase [Solanum cheesmaniae]
 gi|221326124|gb|ACM16941.1| arginine decarboxylase [Solanum galapagense]
 gi|221326126|gb|ACM16942.1| arginine decarboxylase [Solanum galapagense]
 gi|221326128|gb|ACM16943.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|221326130|gb|ACM16944.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|221326132|gb|ACM16945.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|221326134|gb|ACM16946.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|221326148|gb|ACM16953.1| arginine decarboxylase [Solanum galapagense]
 gi|221326150|gb|ACM16954.1| arginine decarboxylase [Solanum galapagense]
 gi|221326188|gb|ACM16973.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|221326190|gb|ACM16974.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|221326192|gb|ACM16975.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|221326194|gb|ACM16976.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|221326208|gb|ACM16983.1| arginine decarboxylase [Solanum cheesmaniae]
 gi|221326210|gb|ACM16984.1| arginine decarboxylase [Solanum cheesmaniae]
 gi|221326224|gb|ACM16991.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|221326226|gb|ACM16992.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|221326264|gb|ACM17011.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|221326266|gb|ACM17012.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|221326304|gb|ACM17031.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|221326306|gb|ACM17032.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|221326320|gb|ACM17039.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|221326322|gb|ACM17040.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|221326388|gb|ACM17073.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|221326390|gb|ACM17074.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|221326392|gb|ACM17075.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|221326394|gb|ACM17076.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|221326396|gb|ACM17077.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|221326398|gb|ACM17078.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|221326452|gb|ACM17105.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|221326454|gb|ACM17106.1| arginine decarboxylase [Solanum pimpinellifolium]
          Length = 222

 Score = 49.0 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 45  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGTGFR 104

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152
           L+   D ++K+     IGLR      +S    +       + G      + 
Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214


>gi|3421170|gb|AAC68522.1| arginine decarboxylase [Thlaspi arvense]
          Length = 407

 Score = 49.0 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/277 (12%), Positives = 78/277 (28%), Gaps = 29/277 (10%)

Query: 30  VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82
            + +  +K      + + + ++      G  + S  E++L          +       +K
Sbjct: 1   YQGVYPVKGNQDRFVVEDIVKFGSPFRFGLEAGSKPEILLAMSCLCKGNPDAFLVCNGFK 60

Query: 83  DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134
           D E  ++            I+     +L+   D +QK++ +   GLR      +S    +
Sbjct: 61  DAEYISLALLGRKLALNTVIVLEQEEELDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGS 120

Query: 135 DPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKS---FLCFSAMLKNIE 183
                  + G      +              +  L FH   +  S        A    + 
Sbjct: 121 TSGEKG-KFGLTTTQIVRVMRKLSQSGMLDCLQLLHFHIGSQIPSTSLLSDGVAEAAQLY 179

Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243
            E       ++ I +GGG+          +    +    E+Y+  +        V +  +
Sbjct: 180 CELVRLGAHMKVIDIGGGLGIDYDGSKSGESDLSVAYTLEEYAEAVVASVR--FVCDRRS 237

Query: 244 LNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280
           +   V+        +      +   V         A 
Sbjct: 238 VKHPVICSESGRAIVSHHSVLIFEAVSAVKPMAHHAN 274


>gi|3421174|gb|AAC68523.1| arginine decarboxylase [Eutrema salsugineum]
          Length = 407

 Score = 49.0 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/277 (12%), Positives = 78/277 (28%), Gaps = 29/277 (10%)

Query: 30  VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82
            + +  +K      + + + ++      G  + S  E++L          +       +K
Sbjct: 1   YQGVYPVKGNQDRFVVEDIVKFGSPFRFGLEAGSKPEILLAMSCLCKGNPDAFLVCNGFK 60

Query: 83  DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134
           D E  ++            I+     +L+   D +QK++ +   GLR      +S    +
Sbjct: 61  DAEYISLALLGRKLALNTVIVLEQEEELDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGS 120

Query: 135 DPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKS---FLCFSAMLKNIE 183
                  + G      +              +  L FH   +  S        A    + 
Sbjct: 121 TSGEKG-KFGLTTTQIVRVMRKLSQSGMLDCLQLLHFHIGSQIPSTSLLSDGVAEAAQLY 179

Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243
            E       ++ I +GGG+          +    +    E+Y+  +        V +  +
Sbjct: 180 CELVRLGAHMKVIDIGGGLGIDYDGSKSGESDLSVAYTLEEYAEAVVASVR--FVCDRRS 237

Query: 244 LNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280
           +   V+        +      +   V         A 
Sbjct: 238 VKHPVICSESGRAIVSHHSVLIFEAVSAVKPMAHHAN 274


>gi|303328270|ref|ZP_07358708.1| arginine 2-monooxygenase [Desulfovibrio sp. 3_1_syn3]
 gi|302861600|gb|EFL84536.1| arginine 2-monooxygenase [Desulfovibrio sp. 3_1_syn3]
          Length = 638

 Score = 49.0 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/280 (13%), Positives = 75/280 (26%), Gaps = 43/280 (15%)

Query: 12  QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGH 67
           +     + T  Y  +  GV     +K      + + + Q+      G    S  E++   
Sbjct: 84  ESFRKAIKTLNYTGEYRGV---FPIKVNQQQQVVEKIAQFGAHYHHGLEVGSKAELIAAV 140

Query: 68  EKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------FKDKAQKLHKKIGL 120
                 E       YKD E   +      + FN    L          ++A+ L  +  +
Sbjct: 141 SLMRDTEACIVCNGYKDAEFIDLGLQALRLGFNVFFVLEMPGELDVLLERAKVLGVRPNI 200

Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKI--------ESEIKNVNGLMFHNNCE--- 168
            +   ++        D     S  G      +           +     L +H   +   
Sbjct: 201 GVRAKLAVKAGGHWTDSGGERSTFGLSPAQIVDVVDTLKAHDMLDCFRLLHYHLGSQVSN 260

Query: 169 NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--------------DYPVKDF 214
            +           +          + ++ LGGG+                   D    D 
Sbjct: 261 IRDIRTGVMEGARLYVGLVQEGAPMGYLDLGGGLAVDYDGSHTNYISSRNYNLDEYCADV 320

Query: 215 CQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDI 251
            + +    ++       I  E G A V   + L   +LD+
Sbjct: 321 VEAIMSILDEQQVPHPHIITESGRATVAYYSVLLFNILDV 360


>gi|156977941|ref|YP_001448847.1| arginine decarboxylase [Vibrio harveyi ATCC BAA-1116]
 gi|156529535|gb|ABU74620.1| hypothetical protein VIBHAR_06737 [Vibrio harveyi ATCC BAA-1116]
          Length = 640

 Score = 49.0 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/254 (11%), Positives = 65/254 (25%), Gaps = 33/254 (12%)

Query: 18  LDTALYIRKN----AGVKLLLALKCFAAWGMFDT-------LNQYMDGTTSSSLYEVM-- 64
                   +         L+  +K      + D        L     G  + S  E++  
Sbjct: 82  CQAFNQAIEEYQYPNKYLLVYPIKVNQQREVVDEILASQAQLENKQLGLEAGSKPELLAV 141

Query: 65  LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           L   + G      N       +        L +   I+   +S+L+   ++A+ L     
Sbjct: 142 LALAQQGSSVIVCNGYKDREYVRLALIGEKLGHKVFIVLEKLSELDLVLEEAKSLGVTPR 201

Query: 120 LRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIKNVNG---------LMFHNNCE- 168
           L +   ++         +     + G      + S I  +           + FH   + 
Sbjct: 202 LGLRIRLASQGAGKWQASGGEKSKFGLSASQVL-SVIDRLKCEDQLDTMQLVHFHLGSQM 260

Query: 169 --NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226
              +              E       I++  +GGG+               +     +Y+
Sbjct: 261 ANIRDVRNGVNESARFYCELRAMGANIDYFDVGGGLAVDYDG-TRSQSSNSMNYGLAEYA 319

Query: 227 VQIYLEPGEAIVTN 240
             I    G+     
Sbjct: 320 RNIVNTVGDVCQQY 333


>gi|326201060|ref|ZP_08190932.1| arginine decarboxylase [Clostridium papyrosolvens DSM 2782]
 gi|325988628|gb|EGD49452.1| arginine decarboxylase [Clostridium papyrosolvens DSM 2782]
          Length = 639

 Score = 49.0 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/258 (13%), Positives = 71/258 (27%), Gaps = 34/258 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKL--------LLALKCFAAWGMFDTLNQYM---- 52
           P  L  +  L + +         A  KL        +  +K      + + + ++     
Sbjct: 67  PVLLRFENLLDSQISFLNNSFNEAMHKLNYKGAYRGVYPIKVNQQQQVVEEVTRFGQRYH 126

Query: 53  DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLN------ 105
            G    S  E++         E       YKD E   +      + F     +       
Sbjct: 127 HGLEVGSKAELVAALSVMKDKEACLICNGYKDEEFIDLGLYSVKMGFKCFFVIEIPGELD 186

Query: 106 --KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------- 156
               + +A  +   IG+RI  S         +     S  G      I    +       
Sbjct: 187 IVLERSRALGIKPNIGIRIKLSAKAGGH-WTESGGDRSIFGLNMSQVISMVDRLKEEGML 245

Query: 157 -NVNGLMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVK 212
            ++  L +H   +  +     + +    + +         + ++ LGGG+          
Sbjct: 246 DSLKLLHYHLGSQIPNIRDIRSAVLEAARVYAELVKEGAPMGYLDLGGGLAVDYDGSNTN 305

Query: 213 DFCQRLKEFSEKYSVQIY 230
               R     E+Y + I 
Sbjct: 306 YTNSR-NYTVEEYCMDIV 322


>gi|48474851|sp|Q8DA54|SPEA_VIBVU RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
          Length = 641

 Score = 49.0 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/317 (11%), Positives = 80/317 (25%), Gaps = 52/317 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMF-DTLNQYMD-- 53
           P  +   Q L   + +       A           L+  +K      +  + L       
Sbjct: 65  PVLVRFPQILHQRVHSICDAFNQAIEEYQYPNKYLLVYPIKVNQQREVVDEILAASQAQL 124

Query: 54  -----GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTV 101
                G  + S  E++  L   +        N       I        L +   I+   +
Sbjct: 125 ETKQLGLEAGSKPELLAVLAMAQHASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKM 184

Query: 102 SQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE-------- 152
           S+L+    +A+ L     L I   ++         +     + G      +         
Sbjct: 185 SELDLVLREAKSLGVTPRLGIRIRLASQGAGKWQASGGEKSKFGLSASQVLNVISRLKKE 244

Query: 153 SEIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK-- 207
           +++  +  + FH   +    +              E       I +  +GGG+       
Sbjct: 245 NQLDTLQLVHFHLGSQMANIRDVRNGVNESARFYCELRTLGANITYFDVGGGLAIDYDGT 304

Query: 208 ------------DYPVKDFCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDIS 252
                           ++    + +  + Y   +     E G ++  +   L + V+   
Sbjct: 305 RSQSSNSMNYGLVEYARNIVNTVGDVCKDYKQPMPVIISESGRSLTAHHAVLISNVIGTE 364

Query: 253 ENIKNLVIVDSSVEAHV 269
                 V         +
Sbjct: 365 TYKPETVTEPEEDFPLL 381


>gi|297193992|ref|ZP_06911390.1| LOW QUALITY PROTEIN: lysine/ornithine decarboxylase [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|297152048|gb|EFH31498.1| LOW QUALITY PROTEIN: lysine/ornithine decarboxylase [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 79

 Score = 49.0 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 6/41 (14%), Positives = 15/41 (36%)

Query: 302 IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTI 342
           +  E      ++ GD ++  D   Y  +    +N +    +
Sbjct: 1   MLAEKRALPLLEPGDVVAALDTGAYYFSSHYGYNSLPRTAV 41


>gi|59714023|ref|YP_206798.1| arginine decarboxylase [Vibrio fischeri ES114]
 gi|59482271|gb|AAW87910.1| biosynthetic arginine decarboxylase, PLP-binding [Vibrio fischeri
           ES114]
          Length = 636

 Score = 49.0 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/246 (11%), Positives = 70/246 (28%), Gaps = 27/246 (10%)

Query: 19  DTALYIRKNAGVKLLLALKCFAAWGMFDT-------LNQYMDGTTSSSLYEVM--LGHEK 69
                 +      L+  +K      + D        L Q   G  + S  E++  L   +
Sbjct: 83  QAIDEYQYENHYLLVYPIKVNQQKEVVDEILASQAQLEQKQLGLEAGSKPELLAVLALAQ 142

Query: 70  FGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   N       +        L +   I+   +S+L+    +A+ L  K  L +  
Sbjct: 143 KASSVIVCNGYKDREYVRLALIGEKLGHSVFIVLEKLSELDLVLSEAKALGVKPRLGLRI 202

Query: 125 SVSYSKFILADPNRPFS-RLGEKCKDKI--------ESEIKNVNGLMFHNNCE---NKSF 172
            ++         +     + G      +        E ++  +  + FH   +    +  
Sbjct: 203 RLASQGAGKWQASGGEKSKFGLSASQVLTVINRLKAEDQLDILELVHFHLGSQMANIRDV 262

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232
               +       E      +++++ +GGG+               +     +Y+  I + 
Sbjct: 263 RNGVSEAARFYCELRDIGAKLKYLDVGGGLAVDYDG-TRSQSSNSMNYGLAEYARNIVMT 321

Query: 233 PGEAIV 238
            G+   
Sbjct: 322 IGDICQ 327


>gi|254511855|ref|ZP_05123922.1| arginine decarboxylase [Rhodobacteraceae bacterium KLH11]
 gi|221535566|gb|EEE38554.1| arginine decarboxylase [Rhodobacteraceae bacterium KLH11]
          Length = 629

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/316 (10%), Positives = 82/316 (25%), Gaps = 48/316 (15%)

Query: 2   IKTPYYL----IDKQKLLNNLDTALYIRKNAGVKLLL----ALKCFAAWGMFDTLNQYM- 52
           IKTP  L      + ++ +  ++        G K        +K      + D + ++  
Sbjct: 57  IKTPMVLRVSSYLEHEITHINESFAKAIARVGYKGAYRGVFPIKVNQQAQVIDRIVEFGK 116

Query: 53  ---DGTTSSSLYEVMLGHEK--FGGETHAYNVAYKDCEIDAVLSNCDT-----IIFNTVS 102
               G  + S  E+++              N       +   + +        I+  +  
Sbjct: 117 KYNYGLEAGSKPELVVALAHRLARDALIVCNGVKDAEFVQLAILSRKIGFNTVIVLESPK 176

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI------ 155
           + +   +   +L  +  L +   ++       + +       G      + +        
Sbjct: 177 EADTVIEVYNELGIEPQLGVRVKLTNQISGKWEESSGDRSAFGMNTDQLVATVDKLQSAG 236

Query: 156 --KNVNGLMFHNNCENKSFLCFSA---MLKNIEKEFGHFITQIEWISLGGGIHFTDKDY- 209
               +     H   + +                 E       +  + LGGG+        
Sbjct: 237 LLHCLKLQHSHLGSQVQDVNDVRRAVGEACRYYTELTREGVPLSHLDLGGGMGVDYTGEK 296

Query: 210 ----------------PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE 253
                            V +      + +E     +  E G A+V  ++ L   VL+ + 
Sbjct: 297 KAAENSINYTVEEYCANVVETVAYAMDEAETDHPTLVTESGRAVVATSSMLVFNVLESTL 356

Query: 254 NIKNLVIVDSSVEAHV 269
                       + H+
Sbjct: 357 YDAPTGPEVDPDDHHL 372


>gi|157375744|ref|YP_001474344.1| arginine decarboxylase [Shewanella sediminis HAW-EB3]
 gi|189046769|sp|A8FWJ3|SPEA_SHESH RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|157318118|gb|ABV37216.1| arginine decarboxylase [Shewanella sediminis HAW-EB3]
          Length = 637

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/311 (12%), Positives = 89/311 (28%), Gaps = 55/311 (17%)

Query: 1   MIKT----PYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMF-DT 47
           M+K+    P  +   Q L + +++               +   L+  +K      +  + 
Sbjct: 53  MVKSGVALPVLIRFPQILHHRVNSVCQAFNQAIQKYEYQSDYLLVYPIKVNQQQTVVEEI 112

Query: 48  LNQYMD------GTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEID------AVLSNCD 94
           L   +       G  + S  E+M          +      YKD E          L +  
Sbjct: 113 LASQVSKEVPQLGLEAGSKPELMAVLAMAQKASSVIICNGYKDVEYIRLALIGEKLGHKV 172

Query: 95  TIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE- 152
            I+   +S+L    ++A+KL     L     +++        +     + G      +  
Sbjct: 173 YIVLEKLSELKIILEEAEKLGVTPRLGCRVRLAFQGKGKWQASGGEKSKFGLSASQVLTV 232

Query: 153 -------SEIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGI 202
                    + ++  L FH   +    +      +       E       ++   +GGG+
Sbjct: 233 IDSLKQSQMLDSLQLLHFHLGSQIANIRDIRQGVSEAGRFYCELQKLGANVKCFDVGGGL 292

Query: 203 HFTDK----------DYPVKDFCQRL-------KEFSEKYSVQIYLEPGEAIVTNTTTLN 245
                          +Y + ++   +           ++   +I  E G  +  +   L 
Sbjct: 293 AVDYDGTRSQSSSSMNYGLTEYANNIVSVLTDLCNEYKEPMPRIISESGRFLTAHHAVLI 352

Query: 246 TTVLDISENIK 256
           T V+       
Sbjct: 353 TDVIGTEAYKP 363


>gi|3421132|gb|AAC68510.1| arginine decarboxylase [Aethionema grandiflorum]
          Length = 407

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/277 (12%), Positives = 78/277 (28%), Gaps = 29/277 (10%)

Query: 30  VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82
            + +  +K      + + + ++      G  + S  E++L          +       +K
Sbjct: 1   YQGVYPVKGNQDRFVVEDIVKFGSPFRFGLEAGSKPEILLAMSCLCKGNPDAFLVCNGFK 60

Query: 83  DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134
           D E  ++            I+     +L+   D +QK++ +   GLR      +S    +
Sbjct: 61  DAEYISLALLGRKLALNTVIVLEQEEELDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGS 120

Query: 135 DPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKS---FLCFSAMLKNIE 183
                  + G      +              +  L FH   +  S        A    + 
Sbjct: 121 TSGEKG-KFGLTTTQIVRVVRKLRQAGMLDCLQLLHFHIGSQIPSTALLSDGVAEAAQLY 179

Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243
            E       ++ I +GGG+          +    +    E+Y+  +        V +  +
Sbjct: 180 CELVRLGAHMKVIDIGGGLGIDYDGSKSGESDLSVAYTLEEYADAVVASVR--FVCDRKS 237

Query: 244 LNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280
           +   V+        +      +   V         A 
Sbjct: 238 VKHPVICSESGRAIVSHHSVLIFEAVSAAKPMAHHAN 274


>gi|197337800|ref|YP_002158519.1| arginine decarboxylase [Vibrio fischeri MJ11]
 gi|197315052|gb|ACH64501.1| arginine decarboxylase [Vibrio fischeri MJ11]
          Length = 636

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/246 (11%), Positives = 70/246 (28%), Gaps = 27/246 (10%)

Query: 19  DTALYIRKNAGVKLLLALKCFAAWGMFDT-------LNQYMDGTTSSSLYEVM--LGHEK 69
                 +      L+  +K      + D        L Q   G  + S  E++  L   +
Sbjct: 83  QAIDEYQYENHYLLVYPIKVNQQKEVVDEILASQAQLEQKQLGLEAGSKPELLAVLALAQ 142

Query: 70  FGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   N       +        L +   I+   +S+L+    +A+ L  K  L +  
Sbjct: 143 KASSVIVCNGYKDREYVRLALIGEKLGHSVFIVLEKLSELDLVLSEAKALGVKPRLGLRI 202

Query: 125 SVSYSKFILADPNRPFS-RLGEKCKDKI--------ESEIKNVNGLMFHNNCE---NKSF 172
            ++         +     + G      +        E ++  +  + FH   +    +  
Sbjct: 203 RLASQGAGKWQASGGEKSKFGLSASQVLTVINRLKAEDQLDILELVHFHLGSQMANIRDV 262

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232
               +       E      +++++ +GGG+               +     +Y+  I + 
Sbjct: 263 RNGVSEAARFYCELRDIGAKLKYLDVGGGLAVDYDG-TRSQSSNSMNYGLAEYARNIVMT 321

Query: 233 PGEAIV 238
            G+   
Sbjct: 322 IGDICQ 327


>gi|119472547|ref|ZP_01614595.1| arginine decarboxylase [Alteromonadales bacterium TW-7]
 gi|119444871|gb|EAW26171.1| arginine decarboxylase [Alteromonadales bacterium TW-7]
          Length = 637

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/298 (13%), Positives = 82/298 (27%), Gaps = 51/298 (17%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFD-------TLN 49
           P  +   Q L + + +       A           L+  +K      + +        L 
Sbjct: 62  PALVRFPQILHHRVHSLCGAFNTAIENYGYPKDYLLVYPIKVNQQREVVEEIVASQAELE 121

Query: 50  QYMDGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
           +   G  + S  E++  L   +        N       +        L +   I+   +S
Sbjct: 122 KKQLGLEAGSKPELLTVLAMAEKTSAVIVCNGYKDKEYVRLALIGEKLGHKVYIVLEKLS 181

Query: 103 QLNKFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEIK----- 156
           +L+    +A+ L+ K  + I     S  K          S+ G      +    +     
Sbjct: 182 ELDMVLSQAKALNVKPRIGIRVRLASQGKGKWQASGGEKSKFGLSASQVLHVVNRLKEAG 241

Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207
               +  + FH   +    +      +       E       IE + +GGG+        
Sbjct: 242 QLDLMQLVHFHLGSQMANIRDVRLGVSEAARFYCELRKLGASIECLDVGGGLAIDYDGTR 301

Query: 208 -------DYPVKDFCQRLKEFSEKYSVQI-------YLEPGEAIVTNTTTLNTTVLDI 251
                  +Y + ++   +         Q          E G A+  +   L + V+  
Sbjct: 302 SQSHNSMNYSLAEYANNIVYTIGDTCKQYAQPMPTIISESGRALTAHHAVLISNVIGT 359


>gi|119775098|ref|YP_927838.1| arginine decarboxylase [Shewanella amazonensis SB2B]
 gi|166220854|sp|A1S712|SPEA_SHEAM RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|119767598|gb|ABM00169.1| arginine decarboxylase [Shewanella amazonensis SB2B]
          Length = 636

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/298 (13%), Positives = 83/298 (27%), Gaps = 51/298 (17%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMF-DTLNQYMD-- 53
           P  +   Q L + +D    +           +   L+  +K      +  + L   +   
Sbjct: 61  PVLVRFPQILHHRVDHLCQMFNQAIQKYEYQSDYLLVYPIKVNQQQTVVEEILASQVSKT 120

Query: 54  ----GTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK 108
               G  + S  E+M          +      YKD E   +    + +  +    L K  
Sbjct: 121 VPQLGLEAGSKPELMAVLAMAQKASSVIVCNGYKDKEYIRLALIGEKLGHSVYIVLEKMS 180

Query: 109 DKAQKLHKKIGLRINPSVS-------YSKFILADPNRPFSRLGEKCKDKI--------ES 153
           +    L +   L + P +          K          S+ G      +        E 
Sbjct: 181 ELQMVLEESKKLGVTPRLGLRARLAFQGKGKWQASGGEKSKFGLSAAQILKVVERLKDED 240

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207
            ++++  L FH   +    +              E      ++    +GGG+        
Sbjct: 241 MLESLQLLHFHLGSQIANIRDIRHGVGEAARFYCELRKLGAKVNCFDVGGGLAVDYDGTR 300

Query: 208 -------DYPVKDFCQRL-------KEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251
                  +Y + ++   +          +E+   +I  E G  +  +   L T V+  
Sbjct: 301 SQSNNSMNYALAEYANNIVSVLTDVCNQNEQPMPRIISESGRYLTAHHAVLITDVIGT 358


>gi|256425177|ref|YP_003125830.1| Orn/DAP/Arg decarboxylase 2 [Chitinophaga pinensis DSM 2588]
 gi|256040085|gb|ACU63629.1| Orn/DAP/Arg decarboxylase 2 [Chitinophaga pinensis DSM 2588]
          Length = 465

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/297 (15%), Positives = 89/297 (29%), Gaps = 39/297 (13%)

Query: 93  CDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPN---RPFSRLGEKCKD 149
               + +   +L  +K   +   K        +     F         R    L      
Sbjct: 152 NVIPVLDNKEELEDYKKFIRTKDKVKLGLRIAAEEEPTFDFYTSRLGIRSRDVLEFYVDK 211

Query: 150 KIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI---EKEFGHFITQIEWISLGGGIHFTD 206
              +E   +  L F  N   K  + + +    +     +      +++ I++GGG     
Sbjct: 212 LKGNEKFELKMLHFFMNKGIKDDIYYWSQFNRVVNLYCQLKKICPELDSINVGGGFPIKH 271

Query: 207 K-------DYPVKDFCQRLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLD--ISEN 254
                   +Y V +    +K   +K       IY E G   V  +  +  +V+   +  +
Sbjct: 272 SLGFDYDYNYIVNEIVANIKSICKKNKVPVPDIYTEFGSFTVGESGAVIYSVVGEKMQND 331

Query: 255 IKNLVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEF---- 306
            +N  ++DSS    +PD     E          +       + G +C   D +       
Sbjct: 332 RENWYMIDSSFITTLPDTWGIGEKFLMLPINKWDQEYQEVHLGGLTCDGYDFYTSEEHIN 391

Query: 307 -HFEKPVKIGD---RISFEDVAGYNINRKNWFNGINM-----PTIAVK--NVDGTIK 352
             F   +  G+    I F     Y     + + GI       P   +   + +G +K
Sbjct: 392 AVFLPKL-AGEEPLYIGFFHTGAYQDQL-SGYGGIKHCLIPSPKHVIIGYDKNGQLK 446


>gi|163803240|ref|ZP_02197121.1| arginine decarboxylase [Vibrio sp. AND4]
 gi|159172995|gb|EDP57831.1| arginine decarboxylase [Vibrio sp. AND4]
          Length = 636

 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/253 (11%), Positives = 66/253 (26%), Gaps = 31/253 (12%)

Query: 18  LDTALYIRKN----AGVKLLLALKCFAAWGMFDT-------LNQYMDGTTSSSLYEVM-- 64
                   +         L+  +K      + D        L     G  + S  E++  
Sbjct: 78  CQAFNQAIEEYQYPNKYLLVYPIKVNQQREVVDEILASQAQLENKQLGLEAGSKPELLAV 137

Query: 65  LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           L   + G      N       +        L +   I+   +S+L+   ++A+ L     
Sbjct: 138 LALAQQGSSVIVCNGYKDREYVRLALIGEKLGHKVFIVLEKLSELDLVLEEAKSLGVTPR 197

Query: 120 LRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ESEIKNVNGLMFHNNCE-- 168
           L +   ++         +     + G      +        E ++  +  + FH   +  
Sbjct: 198 LGLRIRLASQGAGKWQASGGEKSKFGLSASQVLSVIGRLKREDQLGTMQLVHFHLGSQMA 257

Query: 169 -NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSV 227
             +              E       I++  +GGG+               +     +Y+ 
Sbjct: 258 NIRDVRNGVNESARFYCELRAMGANIDYFDVGGGLAVDYDG-TRSQSSNSMNYGLAEYAR 316

Query: 228 QIYLEPGEAIVTN 240
            I    G+     
Sbjct: 317 NIVNTVGDVCQQY 329


>gi|228472806|ref|ZP_04057564.1| arginine 2-monooxygenase [Capnocytophaga gingivalis ATCC 33624]
 gi|228275857|gb|EEK14623.1| arginine 2-monooxygenase [Capnocytophaga gingivalis ATCC 33624]
          Length = 463

 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/237 (12%), Positives = 68/237 (28%), Gaps = 38/237 (16%)

Query: 148 KDKIESEIKNVNGLMFHNNCENK---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIH- 203
           K+  +++   +  L F  N   K    +         +  +      +++ +++GGG   
Sbjct: 208 KEIKDNKKVTLKMLHFFINTGIKDNAYYWNELLKCLKVYIQLKKVAPELDSLNIGGGFPI 267

Query: 204 ---------FTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254
                    +      +    +   +  +     I+ E G   V         ++   + 
Sbjct: 268 KTSLAFEYDYAYMVDEIIRQIKIACDQEKVPVPNIFTEFGSFTVGEAGGAIYEIMYQKQQ 327

Query: 255 IKN--LVIVDSSVEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDI------ 302
                  +++SS    +PD     +          N      ++ G +C   D       
Sbjct: 328 NDREKWNMINSSFITTLPDTWAINKRFVLLPINRWNDEYERVLLGGLTCDGDDYYNSEQN 387

Query: 303 -----FGEFHFEKPVKIGDRISFEDVAGY----NINRKNWFNGINMPTIAVKNVDGT 350
                  +++  KP+ IG    F +   Y              I  P I + + +  
Sbjct: 388 MNAIYLPKYNKNKPLYIG----FFNTGAYQDSIGGVGGLQHCLIPQPKIVLIDRNKD 440


>gi|220928548|ref|YP_002505457.1| arginine decarboxylase [Clostridium cellulolyticum H10]
 gi|219998876|gb|ACL75477.1| arginine decarboxylase [Clostridium cellulolyticum H10]
          Length = 639

 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/312 (13%), Positives = 84/312 (26%), Gaps = 50/312 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKL--------LLALKCFAAWGMFDTLNQYM---- 52
           P  L  +  L + +         A  KL        +  +K      + + + ++     
Sbjct: 67  PVLLRFENLLDSQISFLNNSFNEAMHKLNYKGAYRGVYPIKVNQQQQVVEEVTRFGQRYH 126

Query: 53  DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLN------ 105
            G    S  E++         E       YKD E   +      + F     +       
Sbjct: 127 HGLEVGSKAELVAALSVMKDKEACLICNGYKDEEFVDLGLYSVKMGFKCFFVIEIPGELD 186

Query: 106 --KFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK------- 156
               + +A  +   IG+RI  S         +     S  G      I    +       
Sbjct: 187 IVLERSRALGVKPNIGIRIKLSAKAGGH-WTESGGDRSIFGLNMSQVISMVDRLKAEGML 245

Query: 157 -NVNGLMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDK----- 207
            ++  L +H   +  +     + +    + +         + ++ LGGG+          
Sbjct: 246 DSLKLLHYHLGSQIPNIRDIRSAVLEAARVYAELVKEGAPMGYLDLGGGLAVDYDGSNTN 305

Query: 208 ---------DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISENI 255
                    +    D  + +    +        I  E G   V   + L   VLDI +  
Sbjct: 306 YTNSRNYTVEEYCSDIVEAVMTTLDSSDVPHPVIVTESGRTTVAYYSVLIFNVLDIEKFE 365

Query: 256 KNLVIVDSSVEA 267
           ++ +        
Sbjct: 366 EHDIPDKLDENT 377


>gi|159901911|gb|ABX10644.1| alanine racemase [uncultured planctomycete 3FN]
          Length = 363

 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/331 (11%), Positives = 83/331 (25%), Gaps = 29/331 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTS--S 58
           I TP   ID  +L  N+ T      + G +     KC     +    +     G T    
Sbjct: 10  IDTPALCIDLNQLDANIKTMADFIISRGKQWRPHEKCHKTPAIALKQIAAGAIGVTCAKV 69

Query: 59  SLYEVMLGHEKFGGETHAYNVAYKDCEIDA---VLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           S  EVM           A  +              +    I  +  +Q+       ++  
Sbjct: 70  SEAEVMAA-AGIHDILIANMIVGTPKWERVAALCRTTDVIIACDHFAQVEPLAAICRRNG 128

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175
               + +   +  ++          + L          ++  + G   H           
Sbjct: 129 VTCRVIVEVDIGLNRVGTRPGV-DTTELARSIHALDGLQLAGIMGYEGHLLTIADRDEKR 187

Query: 176 SAMLKNI----EKEFGHFITQIEWISL-GGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY 230
           + + + +              +    +  GG          +   +              
Sbjct: 188 TKIAEAMNVLVHCRDELLGADLPCEIVSAGGTGSFQITSDCEGITELQAGGGIFADPHYQ 247

Query: 231 LEPGEAIVTNTTTLNTTVLDIS---ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP 287
                  + ++ T+  TV+        I +        + H+   +     A +   +  
Sbjct: 248 THCDLQDLPSSLTVLATVVSRPSLERAILDAGRKSHHPDFHM-PIVKGHSDAEVVRVSAE 306

Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRI 318
           +  +  G               + +KIGD+I
Sbjct: 307 HCEVKLGP------------KAQDLKIGDKI 325


>gi|237750347|ref|ZP_04580827.1| arginine decarboxylase [Helicobacter bilis ATCC 43879]
 gi|229373877|gb|EEO24268.1| arginine decarboxylase [Helicobacter bilis ATCC 43879]
          Length = 616

 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/290 (12%), Positives = 86/290 (29%), Gaps = 45/290 (15%)

Query: 11  KQKLLNNLDTALYIRKNAGVKLLL----ALKCFAAWG-MFDT--LNQYMD-GTTSSSLYE 62
           + ++    D      K    +        LK       +     L++    G  + S  E
Sbjct: 56  ENQITKVYDAFHTAIKEYQYQGCFKAVFPLKVNQMPNFVLPLVELSKGKCYGLEAGSKSE 115

Query: 63  VMLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
           +++        +      +KD E+       A + +  T+    +++L    + A ++ +
Sbjct: 116 LIVAMAYTNKGSPITVNGFKDKEMISLGFIAANMGHDITLTIEGLNELKTIIEIASEMAE 175

Query: 117 KI---GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHN 165
                GLRI    S    I A      S+ G    + +E+               + FH 
Sbjct: 176 PYPNIGLRIRL-HSVGTGIWAKSGGITSKFGLTSTELLEAMKMLEYSKLLHKFTMIHFHI 234

Query: 166 NCENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVKDFCQR---- 217
             +          ++ +   +          +  +++GGG+      +   +        
Sbjct: 235 GSQISDISPLKKAIREVGNIYAELRKMGAKNLTAVNIGGGLAVEYAQHESMNCKNYTLTE 294

Query: 218 -----------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                      + +   +    I++E G  I  +   L   VL++     
Sbjct: 295 FSGDVVFSLKEIAKNKNELEPDIFIESGRFISASHAVLVAPVLELFSQEY 344


>gi|257462583|ref|ZP_05626993.1| alanine racemase, biosynthetic [Fusobacterium sp. D12]
 gi|317060235|ref|ZP_07924720.1| alanine racemase [Fusobacterium sp. D12]
 gi|313685911|gb|EFS22746.1| alanine racemase [Fusobacterium sp. D12]
          Length = 354

 Score = 48.6 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/219 (10%), Positives = 56/219 (25%), Gaps = 15/219 (6%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAA----WGMFDTLNQYMDGT-TSSSLYEV 63
           ID + L +N+       +  G+++   +K  A       +   L +        +SL E 
Sbjct: 7   IDTEHLRHNIREIQKRAE--GLEVCGVIKANAYGLGVLPVTKILEEEGIHFFAVASLEEA 64

Query: 64  MLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                    GE       + +  ++A  +    I  ++  +L      A K+       I
Sbjct: 65  KEVRSAGIAGEILILGSLFHEEILEAEEAGF-HINVSSREELEWISQHAPKVK------I 117

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           +  +      L    +    +    K          +     +    ++       ++  
Sbjct: 118 HIKIDTGMTRLGFSYQEGRDILAFAKQLSLQISGIFSHFSDADGFSQEAQKYTETQIERF 177

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEF 221
                        I   G +               +  +
Sbjct: 178 LPYANQKDIPYRHIFNSGALVQHRNQKIGNMVRAGICMY 216


>gi|328675673|gb|AEB28348.1| Biosynthetic arginine decarboxylase [Francisella cf. novicida 3523]
          Length = 550

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/273 (11%), Positives = 74/273 (27%), Gaps = 30/273 (10%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMDG-- 54
           P  L  +  L N +D      + A           L   +K      +   +  Y     
Sbjct: 53  PLVLYFEHILKNQIDKLYNSFEKAISNLGYTGKYSLAYPIKVNPEQKIVKAIYDYHQHNQ 112

Query: 55  ----TTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK 110
                   +  E++                +KD     +      I +  +  +    + 
Sbjct: 113 ISLDYEVGTKSELLAVLSTATKTQKIICNGFKDLSFYKIAQLAAKIGYKIIIVIENISEI 172

Query: 111 AQK---LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-----VNGLM 162
                 L   + ++ +  +    F      + F     +  + I     N     +  L 
Sbjct: 173 NIIQDLLDNNVNIKFDFGIRTKPFDNCIHTQKFGLSLSQINECINFLKTNQLQEKLVLLH 232

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTD-----KDYPVKDF 214
            H   + KS     A ++ + K +        ++++I  GGG+           Y    +
Sbjct: 233 SHIGSQLKSTDKVVANIQRLIKIYSELKSDFIKLKYIDFGGGLAVNYDKYDRPSYDFDSY 292

Query: 215 CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTT 247
            + + +  + Y+     +    I  +   +   
Sbjct: 293 AETIVKNCKYYAEYYNCDMPNIITESGRAITAE 325


>gi|241668785|ref|ZP_04756363.1| alanine racemase [Francisella philomiragia subsp. philomiragia ATCC
           25015]
 gi|254877316|ref|ZP_05250026.1| alanine racemase [Francisella philomiragia subsp. philomiragia ATCC
           25015]
 gi|254843337|gb|EET21751.1| alanine racemase [Francisella philomiragia subsp. philomiragia ATCC
           25015]
          Length = 365

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 61/190 (32%), Gaps = 12/190 (6%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAA----WGMFDTLNQYMDGTTSSSLYEVM 64
           I KQ L NN+            K+   +K  A       + +  +  +D    ++  E  
Sbjct: 6   ISKQTLRNNIKIIREYVG--NAKICFPVKANAYGHGIEEIVENTHDLVDFFAVANSLEAF 63

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       + V Y +     V  N   +       + K +  A++L+KKI + IN 
Sbjct: 64  RVTAITKKPVLVFGVIYYEYLERMVSEN-IRVSIQDYDDIEKLEQIAKELNKKIYVHINV 122

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
           +   ++  +   +          K    S+   + G+  H  C +      +   K    
Sbjct: 123 NTGMNRMGVCYNDVC-----RTIKRAYNSKWVVLEGVYSHLACADNRDHPTNTKQKKRFS 177

Query: 185 EFGHFITQIE 194
           E   +  ++ 
Sbjct: 178 EIVEYAKELS 187


>gi|170726410|ref|YP_001760436.1| arginine decarboxylase [Shewanella woodyi ATCC 51908]
 gi|226734334|sp|B1KRD4|SPEA_SHEWM RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|169811757|gb|ACA86341.1| arginine decarboxylase [Shewanella woodyi ATCC 51908]
          Length = 637

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/245 (13%), Positives = 67/245 (27%), Gaps = 38/245 (15%)

Query: 1   MIKT----PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMF-DT 47
           M+K+    P  +   Q L + +++       A           L+  +K      +  + 
Sbjct: 53  MVKSGVNLPVLVRFPQILHHRVNSLCQAFNQAIQKYQYQADYLLVYPIKVNQQQTVVEEI 112

Query: 48  LNQYM------DGTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNT 100
           L   +       G  + S  E+M          +      YKD E   +    + +    
Sbjct: 113 LASQVEKEVPQLGLEAGSKPELMAVLAMAQKASSVIICNGYKDIEYIRLALIGEKLGHKV 172

Query: 101 VSQLNKFKDKAQKLHKKIGLRINPSVS-------YSKFILADPNRPFSRLGEKCKDKI-- 151
              L K  +    L +   L + P +          K          S+ G      +  
Sbjct: 173 YIVLEKLSELKTVLEESKKLGVTPRLGLRVRLAFQGKGKWQASGGEKSKFGLSASQVLTV 232

Query: 152 ------ESEIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGI 202
                 E  + ++  L FH   +    +      +       E       ++   +GGG+
Sbjct: 233 IESLKSEEMLDSLQLLHFHLGSQIANIRDIRQGVSEAGRFYCELQKLGANVKCFDVGGGL 292

Query: 203 HFTDK 207
                
Sbjct: 293 AVDYD 297


>gi|221325970|gb|ACM16864.1| arginine decarboxylase [Solanum chilense]
          Length = 222

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 53/171 (30%), Gaps = 24/171 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMDGT- 55
           P  +     L N L++               A  + +  +KC     + + + ++  G  
Sbjct: 45  PIVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFR 104

Query: 56  ---TSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
               + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164

Query: 104 LNKFKDKAQKLHKKI--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152
           L+   D ++K+  +   GLR      +S    +       + G      + 
Sbjct: 165 LDLVIDISRKMEVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214


>gi|289806500|ref|ZP_06537129.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Typhi str. AG3]
          Length = 205

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 56/190 (29%), Gaps = 26/190 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 1   PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 60

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 61  LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 120

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEI--------KNV 158
            ++A++L+    L +   ++         +     + G      ++            ++
Sbjct: 121 LEEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRDAGRLDSL 180

Query: 159 NGLMFHNNCE 168
             L FH   +
Sbjct: 181 QLLHFHLGSQ 190


>gi|242309691|ref|ZP_04808846.1| arginine decarboxylase [Helicobacter pullorum MIT 98-5489]
 gi|239523692|gb|EEQ63558.1| arginine decarboxylase [Helicobacter pullorum MIT 98-5489]
          Length = 617

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/300 (12%), Positives = 89/300 (29%), Gaps = 49/300 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTLNQYMD-- 53
           P  +     +   ++      +N+          K +  +K       +   + Q  +  
Sbjct: 46  PLLVRFPHLIKKQVEKIFSHFENSIKEYHYKGKFKAVFPIKVNHFPNFILPLMEQTQNRC 105

Query: 54  -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNK 106
            G  + S  E+++               +KD E+       A + +  T+    +++L  
Sbjct: 106 YGLEAGSKSELIIAMAYTNENAPITVNGFKDKEMISLGFIAAKMGHDITLTIEGLNELET 165

Query: 107 FKDKAQKLHKKI---GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-------- 155
             + ++ + K     GLRI    S    I A      S+ G    + +E+          
Sbjct: 166 IIEVSKSMGKPYPNIGLRIRL-HSTGVGIWAKSGGINSKFGLTATELVEAIYLLKKNKLL 224

Query: 156 KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPV 211
                + FH   +          L+     +          +  +++GGG+      +  
Sbjct: 225 DKFTMIHFHIGSQISDIAPLKKALREAGNIYAELRKMGAKNLNNVNIGGGLAVEYTQHEA 284

Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                                + +  ++    I++E G  +  N   L + VL++     
Sbjct: 285 HQNRNYTLGEFSGNVIFTLKEIAKNKKEPEPNIFIESGRYVSANHAVLISPVLELFSQEY 344


>gi|27379075|ref|NP_770604.1| hypothetical protein bll3964 [Bradyrhizobium japonicum USDA 110]
 gi|27352225|dbj|BAC49229.1| bll3964 [Bradyrhizobium japonicum USDA 110]
          Length = 359

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/203 (11%), Positives = 50/203 (24%), Gaps = 11/203 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSLY 61
            TP  +ID  K+  N+         AGV     +K      +    +     G T   L 
Sbjct: 14  GTPCAVIDMDKVERNIARIQKACDEAGVANRPHIKTHKNPTIAKMQIAAGAKGITCQKLG 73

Query: 62  EVM-LGHEKFGGETHAYNVAYKDCEIDAV---LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
           E   + +        +YN+  ++              T+  +  + +      A    + 
Sbjct: 74  EAEIMANAGIDDILISYNLLGEEKMARLGALQAKANMTVAADNSTVVAGLPKAAAASGRP 133

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
           + + +                  +        +  +  K +    F        +     
Sbjct: 134 LSVVVECDTG------RKRAGVETPAEAIALAREIAGSKGLEFAGFMLYPTETGWADAQK 187

Query: 178 MLKNIEKEFGHFITQIEWISLGG 200
                           + +S GG
Sbjct: 188 FYDEALAGVRAHGLDAKIVSTGG 210


>gi|84393203|ref|ZP_00991966.1| arginine decarboxylase [Vibrio splendidus 12B01]
 gi|84376169|gb|EAP93054.1| arginine decarboxylase [Vibrio splendidus 12B01]
          Length = 629

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/267 (12%), Positives = 75/267 (28%), Gaps = 35/267 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDT-------LN 49
           P  +   Q +   +         A           L+  +K      + D        L 
Sbjct: 54  PALVRFPQIVHQRVHNICNAFNQAIDEYQYDNRYLLVYPIKVNQQKEVVDEILASQAQLE 113

Query: 50  QYMDGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
           Q   G  + S  E++  L   +        N       I        L +   I+   +S
Sbjct: 114 QKQLGLEAGSKPELLAVLALAQKASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 173

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153
           +L+    +A+ L  K  L +   ++         +     + G      +        E 
Sbjct: 174 ELDLVLSEAKALGVKPRLGLRIRLASQGAGKWQASGGEKSKFGLSASQVLTVIERLKAED 233

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
           ++  +  + FH   +    +      +       E      Q++++ +GGG+        
Sbjct: 234 QLDVLELVHFHLGSQMANIRDVRNGVSEAARFYCELRDIGAQLKYLDVGGGLAVDYDG-T 292

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAI 237
                  +     +Y+  I +  G+  
Sbjct: 293 RSQSSNSMNYGLLEYARNIVMTVGDIC 319


>gi|219885457|gb|ACL53103.1| unknown [Zea mays]
          Length = 639

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/239 (10%), Positives = 64/239 (26%), Gaps = 23/239 (9%)

Query: 12  QKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSS 59
             L N ++T      +        +  + +  +K      +   + ++      G  + S
Sbjct: 73  DVLKNRIETLHNAFNSAMESTGYTSRYQGVFPIKVNQNKHVVQDMVRFGQQWNYGLEAGS 132

Query: 60  LYEVMLGHEKFG-----GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114
             E+++            + +     YKD +  A+  +   +  N +  L   ++ A  L
Sbjct: 133 KPELLIAMSCLPVTEAEPKPYLICNGYKDADYIALALSARAMGLNPIIVLEMEEELAIVL 192

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174
            +   L+                + F  +       +     +       +         
Sbjct: 193 DQYRKLQQKLPDD------DAVRKKFEPIIGIRAKLLTKLPGHFGSTAGKHGKFGMLADQ 246

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
              + + + KE      Q+    +G  I  T K Y        +           +L  
Sbjct: 247 IYEVAETLGKEGKLHWLQLLHFHIGSMIPTTGKVYDAVSEAAGIYCNLVNEHGAKWLAT 305


>gi|221326020|gb|ACM16889.1| arginine decarboxylase [Solanum pimpinellifolium]
 gi|221326022|gb|ACM16890.1| arginine decarboxylase [Solanum pimpinellifolium]
          Length = 222

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 24/171 (14%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +     L N L++               A  + +  +KC     + + + ++     
Sbjct: 45  PLVVRFPDVLKNRLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGLR 104

Query: 54  -GTTSSSLYEVMLGHE---KFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQ 103
            G  + S  E++L      K   E       +KD E  ++            I+     +
Sbjct: 105 FGLEAGSKPELLLAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEE 164

Query: 104 LNKFKDKAQKL--HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE 152
           L+   D ++K+     IGLR      +S    +       + G      + 
Sbjct: 165 LDLVIDISRKMAVQPVIGLRAKLRTKHSGHFGSTSGEKG-KFGLTTTQILR 214


>gi|224367265|ref|YP_002601428.1| arginine decarboxylase [Desulfobacterium autotrophicum HRM2]
 gi|223689981|gb|ACN13264.1| SpeA [Desulfobacterium autotrophicum HRM2]
          Length = 639

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/247 (12%), Positives = 69/247 (27%), Gaps = 27/247 (10%)

Query: 12  QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLGH 67
           +     + T  Y  +  GV     +K      + + +         G  + S  E++   
Sbjct: 85  ESFRTAIRTFDYKGEFKGV---FPIKVNQQKQVIEAITNIGTQYHHGLEAGSKAELIAAL 141

Query: 68  EKF-GGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
                 E       YKD E          +      +    S+L+   +++  L  +  +
Sbjct: 142 SFLKDKEACLVCNGYKDREFIDLGLYACKMGYKCFFVLEMPSELDLILERSSALGIRPLI 201

Query: 121 RINPSVSYS-KFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLMFHNNCENKS 171
            +   +S        +     S  G      IE          +  +  L +H   +  +
Sbjct: 202 GVRFKLSTQAGGHWTESAGDRSIFGLSTSQIIEVIEKLKSLEMLDCLQLLHYHLGSQISN 261

Query: 172 FLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
                A ++   + +         + +  LGGG+          ++        E+Y   
Sbjct: 262 IRDIRASVQEACQVYAGLVKEGAAMGYFDLGGGLAVDYDG-SHTNYMNSRNYSLEEYCAD 320

Query: 229 IYLEPGE 235
           +     E
Sbjct: 321 VIEAIME 327


>gi|327485814|gb|AEA80220.1| Biosynthetic arginine decarboxylase [Vibrio cholerae LMA3894-4]
          Length = 636

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/268 (11%), Positives = 71/268 (26%), Gaps = 35/268 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52
           P  +   Q L   +         A           L+  +K      + D +     +  
Sbjct: 61  PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQKEVVDEILASQAELE 120

Query: 53  D---GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
               G  + S  E++  L   +        N       I        L +   I+   +S
Sbjct: 121 HKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 180

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153
           +L+    +A+ L  K  L +   ++         +     + G      +        E 
Sbjct: 181 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVINRLKAED 240

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
           +++ +  + FH   +    +              E       I++  +GGG+        
Sbjct: 241 QLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELRELGAHIDFFDVGGGLAVDYDG-T 299

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
                  +     +Y+  I     +   
Sbjct: 300 RSQSSNSMNYGLHEYARNIVSTVSDVCN 327


>gi|229522364|ref|ZP_04411780.1| biosynthetic arginine decarboxylase [Vibrio cholerae TM 11079-80]
 gi|229340349|gb|EEO05355.1| biosynthetic arginine decarboxylase [Vibrio cholerae TM 11079-80]
          Length = 661

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/268 (11%), Positives = 71/268 (26%), Gaps = 35/268 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52
           P  +   Q L   +         A           L+  +K      + D +     +  
Sbjct: 86  PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQKEVVDEILASQAELE 145

Query: 53  D---GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
               G  + S  E++  L   +        N       I        L +   I+   +S
Sbjct: 146 HKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 205

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153
           +L+    +A+ L  K  L +   ++         +     + G      +        E 
Sbjct: 206 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVINRLKAED 265

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
           +++ +  + FH   +    +              E       I++  +GGG+        
Sbjct: 266 QLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELRELGAHIDFFDVGGGLAVDYDG-T 324

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
                  +     +Y+  I     +   
Sbjct: 325 RSQSSNSMNYGLHEYARNIVSTVSDVCN 352


>gi|229526675|ref|ZP_04416079.1| biosynthetic arginine decarboxylase [Vibrio cholerae bv. albensis
           VL426]
 gi|229528324|ref|ZP_04417715.1| biosynthetic arginine decarboxylase [Vibrio cholerae 12129(1)]
 gi|254284449|ref|ZP_04959416.1| biosynthetic arginine decarboxylase [Vibrio cholerae AM-19226]
 gi|297580164|ref|ZP_06942091.1| biosynthetic arginine decarboxylase [Vibrio cholerae RC385]
 gi|150425234|gb|EDN17010.1| biosynthetic arginine decarboxylase [Vibrio cholerae AM-19226]
 gi|229334686|gb|EEO00172.1| biosynthetic arginine decarboxylase [Vibrio cholerae 12129(1)]
 gi|229336833|gb|EEO01851.1| biosynthetic arginine decarboxylase [Vibrio cholerae bv. albensis
           VL426]
 gi|297535810|gb|EFH74644.1| biosynthetic arginine decarboxylase [Vibrio cholerae RC385]
          Length = 661

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/268 (11%), Positives = 71/268 (26%), Gaps = 35/268 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52
           P  +   Q L   +         A           L+  +K      + D +     +  
Sbjct: 86  PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQKEVVDEILASQAELE 145

Query: 53  D---GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
               G  + S  E++  L   +        N       I        L +   I+   +S
Sbjct: 146 HKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 205

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153
           +L+    +A+ L  K  L +   ++         +     + G      +        E 
Sbjct: 206 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVINRLKAED 265

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
           +++ +  + FH   +    +              E       I++  +GGG+        
Sbjct: 266 QLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELRELGAHIDFFDVGGGLAVDYDG-T 324

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
                  +     +Y+  I     +   
Sbjct: 325 RSQSSNSMNYGLHEYARNIVSTVSDVCN 352


>gi|153827278|ref|ZP_01979945.1| biosynthetic arginine decarboxylase [Vibrio cholerae MZO-2]
 gi|149738795|gb|EDM53137.1| biosynthetic arginine decarboxylase [Vibrio cholerae MZO-2]
          Length = 354

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/268 (11%), Positives = 71/268 (26%), Gaps = 35/268 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52
           P  +   Q L   +         A           L+  +K      + D +     +  
Sbjct: 79  PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQKEVVDEILASQAELE 138

Query: 53  D---GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
               G  + S  E++  L   +        N       I        L +   I+   +S
Sbjct: 139 HKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 198

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153
           +L+    +A+ L  K  L +   ++         +     + G      +        E 
Sbjct: 199 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVINRLKAED 258

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
           +++ +  + FH   +    +              E       I++  +GGG+        
Sbjct: 259 QLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELRELGAHIDFFDVGGGLAVDYDG-T 317

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
                  +     +Y+  I     +   
Sbjct: 318 RSQSSNSMNYGLHEYARNIVSTVSDVCN 345


>gi|153830156|ref|ZP_01982823.1| biosynthetic arginine decarboxylase [Vibrio cholerae 623-39]
 gi|148874374|gb|EDL72509.1| biosynthetic arginine decarboxylase [Vibrio cholerae 623-39]
          Length = 661

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/268 (11%), Positives = 71/268 (26%), Gaps = 35/268 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52
           P  +   Q L   +         A           L+  +K      + D +     +  
Sbjct: 86  PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQKEVVDEILASQAELE 145

Query: 53  D---GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
               G  + S  E++  L   +        N       I        L +   I+   +S
Sbjct: 146 HKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 205

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153
           +L+    +A+ L  K  L +   ++         +     + G      +        E 
Sbjct: 206 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVINRLKAED 265

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
           +++ +  + FH   +    +              E       I++  +GGG+        
Sbjct: 266 QLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELRELGAHIDFFDVGGGLAVDYDG-T 324

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
                  +     +Y+  I     +   
Sbjct: 325 RSQSSNSMNYGLHEYARNIVSTVSDVCN 352


>gi|254227104|ref|ZP_04920657.1| biosynthetic arginine decarboxylase [Vibrio cholerae V51]
 gi|125620374|gb|EAZ48755.1| biosynthetic arginine decarboxylase [Vibrio cholerae V51]
          Length = 649

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/268 (11%), Positives = 71/268 (26%), Gaps = 35/268 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52
           P  +   Q L   +         A           L+  +K      + D +     +  
Sbjct: 86  PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQKEVVDEILASQAELE 145

Query: 53  D---GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
               G  + S  E++  L   +        N       I        L +   I+   +S
Sbjct: 146 HKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 205

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153
           +L+    +A+ L  K  L +   ++         +     + G      +        E 
Sbjct: 206 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVINRLKAED 265

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
           +++ +  + FH   +    +              E       I++  +GGG+        
Sbjct: 266 QLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELRELGAHIDFFDVGGGLAVDYDG-T 324

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
                  +     +Y+  I     +   
Sbjct: 325 RSQSSNSMNYGLHEYARNIVSTVSDVCN 352


>gi|153215898|ref|ZP_01950202.1| biosynthetic arginine decarboxylase [Vibrio cholerae 1587]
 gi|153802696|ref|ZP_01957282.1| biosynthetic arginine decarboxylase [Vibrio cholerae MZO-3]
 gi|124114542|gb|EAY33362.1| biosynthetic arginine decarboxylase [Vibrio cholerae 1587]
 gi|124121781|gb|EAY40524.1| biosynthetic arginine decarboxylase [Vibrio cholerae MZO-3]
          Length = 661

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/268 (11%), Positives = 71/268 (26%), Gaps = 35/268 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52
           P  +   Q L   +         A           L+  +K      + D +     +  
Sbjct: 86  PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQKEVVDEILASQAELE 145

Query: 53  D---GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
               G  + S  E++  L   +        N       I        L +   I+   +S
Sbjct: 146 HKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 205

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153
           +L+    +A+ L  K  L +   ++         +     + G      +        E 
Sbjct: 206 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVINRLKAED 265

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
           +++ +  + FH   +    +              E       I++  +GGG+        
Sbjct: 266 QLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELRELGAHIDFFDVGGGLAVDYDG-T 324

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
                  +     +Y+  I     +   
Sbjct: 325 RSQSSNSMNYGLHEYARNIVSTVSDVCN 352


>gi|68165772|gb|AAY87846.1| biosynthetic arginine decarboxylase [Vibrio cholerae]
 gi|68165774|gb|AAY87847.1| biosynthetic arginine decarboxylase [Vibrio cholerae]
 gi|68165776|gb|AAY87848.1| biosynthetic arginine decarboxylase [Vibrio cholerae]
 gi|68165778|gb|AAY87849.1| biosynthetic arginine decarboxylase [Vibrio cholerae]
 gi|68165780|gb|AAY87850.1| biosynthetic arginine decarboxylase [Vibrio cholerae]
          Length = 331

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/268 (11%), Positives = 71/268 (26%), Gaps = 35/268 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52
           P  +   Q L   +         A           L+  +K      + D +     +  
Sbjct: 43  PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQKEVVDEILASQAELE 102

Query: 53  D---GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
               G  + S  E++  L   +        N       I        L +   I+   +S
Sbjct: 103 HKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 162

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153
           +L+    +A+ L  K  L +   ++         +     + G      +        E 
Sbjct: 163 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVINRLKAED 222

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
           +++ +  + FH   +    +              E       I++  +GGG+        
Sbjct: 223 QLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELRELGAHIDFFDVGGGLAVDYDG-T 281

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
                  +     +Y+  I     +   
Sbjct: 282 RSQSSNSMNYGLHEYARNIVSTVSDVCN 309


>gi|262173509|ref|ZP_06041186.1| biosynthetic arginine decarboxylase [Vibrio mimicus MB-451]
 gi|261890867|gb|EEY36854.1| biosynthetic arginine decarboxylase [Vibrio mimicus MB-451]
          Length = 654

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/268 (11%), Positives = 71/268 (26%), Gaps = 35/268 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52
           P  +   Q L   +         A           L+  +K      + D +     +  
Sbjct: 79  PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQREVVDEILASQAELE 138

Query: 53  D---GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
               G  + S  E++  L   +        N       I        L +   I+   +S
Sbjct: 139 HKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 198

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153
           +L+    +A+ L  K  L +   ++         +     + G      +        E 
Sbjct: 199 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVINRLKAED 258

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
           +++ +  + FH   +    +              E       I++  +GGG+        
Sbjct: 259 QLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELRELGAHIDFFDVGGGLAVDYDG-T 317

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
                  +     +Y+  I     +   
Sbjct: 318 RSQSSNSMNYGLHEYARNIVSTVSDVCN 345


>gi|261212825|ref|ZP_05927109.1| biosynthetic arginine decarboxylase [Vibrio sp. RC341]
 gi|260837890|gb|EEX64567.1| biosynthetic arginine decarboxylase [Vibrio sp. RC341]
          Length = 654

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/268 (11%), Positives = 71/268 (26%), Gaps = 35/268 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52
           P  +   Q L   +         A           L+  +K      + D +     +  
Sbjct: 79  PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQREVVDEILASQAELE 138

Query: 53  D---GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
               G  + S  E++  L   +        N       I        L +   I+   +S
Sbjct: 139 HKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 198

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153
           +L+    +A+ L  K  L +   ++         +     + G      +        E 
Sbjct: 199 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVINRLKAED 258

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
           +++ +  + FH   +    +              E       I++  +GGG+        
Sbjct: 259 QLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELRELGAHIDFFDVGGGLAVDYDG-T 317

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
                  +     +Y+  I     +   
Sbjct: 318 RSQSSNSMNYGLHEYARNIVSTVSDVCN 345


>gi|258623205|ref|ZP_05718214.1| biosynthetic arginine decarboxylase [Vibrio mimicus VM573]
 gi|258584503|gb|EEW09243.1| biosynthetic arginine decarboxylase [Vibrio mimicus VM573]
          Length = 661

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/268 (11%), Positives = 71/268 (26%), Gaps = 35/268 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52
           P  +   Q L   +         A           L+  +K      + D +     +  
Sbjct: 86  PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQREVVDEILASQAELE 145

Query: 53  D---GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
               G  + S  E++  L   +        N       I        L +   I+   +S
Sbjct: 146 HKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 205

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153
           +L+    +A+ L  K  L +   ++         +     + G      +        E 
Sbjct: 206 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVINRLKAED 265

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
           +++ +  + FH   +    +              E       I++  +GGG+        
Sbjct: 266 QLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELRELGAHIDFFDVGGGLAVDYDG-T 324

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
                  +     +Y+  I     +   
Sbjct: 325 RSQSSNSMNYGLHEYARNIVSTVSDVCN 352


>gi|258624997|ref|ZP_05719921.1| biosynthetic arginine decarboxylase [Vibrio mimicus VM603]
 gi|258582723|gb|EEW07548.1| biosynthetic arginine decarboxylase [Vibrio mimicus VM603]
          Length = 661

 Score = 48.2 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/268 (11%), Positives = 71/268 (26%), Gaps = 35/268 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52
           P  +   Q L   +         A           L+  +K      + D +     +  
Sbjct: 86  PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQREVVDEILASQAELE 145

Query: 53  D---GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
               G  + S  E++  L   +        N       I        L +   I+   +S
Sbjct: 146 HKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 205

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153
           +L+    +A+ L  K  L +   ++         +     + G      +        E 
Sbjct: 206 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVINRLKAED 265

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
           +++ +  + FH   +    +              E       I++  +GGG+        
Sbjct: 266 QLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELRELGAHIDFFDVGGGLAVDYDG-T 324

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
                  +     +Y+  I     +   
Sbjct: 325 RSQSSNSMNYGLHEYARNIVSTVSDVCN 352


>gi|302552096|ref|ZP_07304438.1| alanine racemase domain-containing protein [Streptomyces
           viridochromogenes DSM 40736]
 gi|302469714|gb|EFL32807.1| alanine racemase domain-containing protein [Streptomyces
           viridochromogenes DSM 40736]
          Length = 364

 Score = 47.8 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/198 (8%), Positives = 49/198 (24%), Gaps = 8/198 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  ++D   L +N++      +  G  L    K      + D  L     G + +++
Sbjct: 9   LATPALVVDPDVLESNIERMAEASRAQGFVLRPHAKAHKCAQIGDLQLRAGARGLSVATI 68

Query: 61  YEVML-GHEKFGGETHAYN----VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E              AY                      +   ++    +  +      
Sbjct: 69  GEAEAFARVGVDDLFIAYPVWLDADKAQRLRRLADRIALRVGVESIEGAQRLGNAVHGSA 128

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175
           + + + +       +  +         +G+   D                  + ++    
Sbjct: 129 RPVEVLVEVDSGSRRTGVQPHMAGE--VGKAAADAGLLVAGVFTFPGHGYGHDARAREHA 186

Query: 176 SAMLKNIEKEFGHFITQI 193
           +   +    +    +  +
Sbjct: 187 ARDEERTLGQAAQVLRDL 204


>gi|195643260|gb|ACG41098.1| arginine decarboxylase [Zea mays]
          Length = 639

 Score = 47.8 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/239 (10%), Positives = 64/239 (26%), Gaps = 23/239 (9%)

Query: 12  QKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSS 59
             L N ++T      +        +  + +  +K      +   + ++      G  + S
Sbjct: 73  DVLKNRIETLHNAFNSAMESTGYTSRYQGVFPIKVNQNKHVVQDMVRFGQQWNYGLEAGS 132

Query: 60  LYEVMLGHEKFG-----GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114
             E+++            + +     YKD +  A+  +   +  N +  L   ++ A  L
Sbjct: 133 KPELLIAMSCLPVTEAEPKPYLICNGYKDADYIALALSARAMGLNPIIVLEMEEELAIVL 192

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174
            +   L+                + F  +       +     +       +         
Sbjct: 193 DQYKKLQQKLPDD------DAVRKKFEPVIGIRAKLLTKLPGHFGSTAGKHGKFGMLADQ 246

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
              + + + KE      Q+    +G  I  T K Y        +           +L  
Sbjct: 247 IYEVAETLGKEGKLHWLQLLHFHIGSMIPTTGKVYDAVSEAAGIYCNLVNEHGAKWLAT 305


>gi|254469431|ref|ZP_05082836.1| arginine decarboxylase [Pseudovibrio sp. JE062]
 gi|211961266|gb|EEA96461.1| arginine decarboxylase [Pseudovibrio sp. JE062]
          Length = 325

 Score = 47.8 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/215 (10%), Positives = 57/215 (26%), Gaps = 23/215 (10%)

Query: 18  LDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLGHEK-FGG 72
            D    +      + +  +K      + D + ++      G  + S  E+++        
Sbjct: 81  ADAIKRVGYKGKYRGVFPIKVNQQAQVVDRIVEFGRPYSYGLEAGSKPELVIALAHRLPK 140

Query: 73  ETHAYNVAYKDCEIDAVLSNCD------TIIFNTVSQLNKFKDKAQKLHKKIGLRINPS- 125
           +        KD E   +            I+  +  +L    D  ++L ++  L +    
Sbjct: 141 DALIVCNGVKDEEFIRLAILSRKLGFNTIIVLESPKELETVIDVVEELGEEPLLGVRVKL 200

Query: 126 VSYSKFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLMFHNNCENKSFLCFSA 177
            +       + +   S  G      +           +  +     H   +         
Sbjct: 201 TNQIGGKWEESSGDRSTFGMNTDQLVSVIDKLREAKLLHCLKLQHSHLGSQVPDVNDVRR 260

Query: 178 MLKNIEKEFGH---FITQIEWISLGGGIHFTDKDY 209
            +    + F        ++  + LGGG+       
Sbjct: 261 AVGEACRYFVELTREGAELTHLDLGGGLGVDYTGE 295


>gi|227812381|ref|YP_002812391.1| biosynthetic arginine decarboxylase [Vibrio cholerae M66-2]
 gi|227011523|gb|ACP07734.1| biosynthetic arginine decarboxylase [Vibrio cholerae M66-2]
          Length = 661

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/268 (11%), Positives = 68/268 (25%), Gaps = 35/268 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52
           P  +   Q L   +         A           L+  +K      + D +     +  
Sbjct: 86  PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQKEVVDEILASQAELE 145

Query: 53  D---GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
               G  + S  E++  L   +        N       I        L +   I+   +S
Sbjct: 146 HKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 205

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK----- 156
           +L+    +A+ L  K  L +   ++         +     + G      +    +     
Sbjct: 206 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVINRLKAEN 265

Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
               +  + FH   +    +              E       I++  +GGG+        
Sbjct: 266 QLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELRELGAHIDFFDVGGGLAVDYDG-T 324

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
                  +     +Y+  I     +   
Sbjct: 325 RSQSSNSMNYGLHEYARNIVSTVSDVCN 352


>gi|153820258|ref|ZP_01972925.1| biosynthetic arginine decarboxylase [Vibrio cholerae NCTC 8457]
 gi|255746431|ref|ZP_05420378.1| biosynthetic arginine decarboxylase [Vibrio cholera CIRS 101]
 gi|262158214|ref|ZP_06029331.1| biosynthetic arginine decarboxylase [Vibrio cholerae INDRE 91/1]
 gi|262169090|ref|ZP_06036783.1| biosynthetic arginine decarboxylase [Vibrio cholerae RC27]
 gi|126509199|gb|EAZ71793.1| biosynthetic arginine decarboxylase [Vibrio cholerae NCTC 8457]
 gi|255736185|gb|EET91583.1| biosynthetic arginine decarboxylase [Vibrio cholera CIRS 101]
 gi|262022371|gb|EEY41079.1| biosynthetic arginine decarboxylase [Vibrio cholerae RC27]
 gi|262029896|gb|EEY48543.1| biosynthetic arginine decarboxylase [Vibrio cholerae INDRE 91/1]
          Length = 654

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/268 (11%), Positives = 68/268 (25%), Gaps = 35/268 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52
           P  +   Q L   +         A           L+  +K      + D +     +  
Sbjct: 79  PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQKEVVDEILASQAELE 138

Query: 53  D---GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
               G  + S  E++  L   +        N       I        L +   I+   +S
Sbjct: 139 HKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 198

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK----- 156
           +L+    +A+ L  K  L +   ++         +     + G      +    +     
Sbjct: 199 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVINRLKAEN 258

Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
               +  + FH   +    +              E       I++  +GGG+        
Sbjct: 259 QLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELRELGAHIDFFDVGGGLAVDYDG-T 317

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
                  +     +Y+  I     +   
Sbjct: 318 RSQSSNSMNYGLHEYARNIVSTVSDVCN 345


>gi|68165764|gb|AAY87842.1| biosynthetic arginine decarboxylase [Vibrio cholerae]
 gi|68165766|gb|AAY87843.1| biosynthetic arginine decarboxylase [Vibrio cholerae]
 gi|68165768|gb|AAY87844.1| biosynthetic arginine decarboxylase [Vibrio cholerae]
 gi|68165770|gb|AAY87845.1| biosynthetic arginine decarboxylase [Vibrio cholerae]
 gi|68165782|gb|AAY87851.1| biosynthetic arginine decarboxylase [Vibrio cholerae]
 gi|68165784|gb|AAY87852.1| biosynthetic arginine decarboxylase [Vibrio cholerae]
 gi|68165786|gb|AAY87853.1| biosynthetic arginine decarboxylase [Vibrio cholerae]
 gi|68165788|gb|AAY87854.1| biosynthetic arginine decarboxylase [Vibrio cholerae]
 gi|68165790|gb|AAY87855.1| biosynthetic arginine decarboxylase [Vibrio cholerae]
 gi|68165792|gb|AAY87856.1| biosynthetic arginine decarboxylase [Vibrio cholerae]
 gi|68165794|gb|AAY87857.1| biosynthetic arginine decarboxylase [Vibrio cholerae]
          Length = 331

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/268 (11%), Positives = 68/268 (25%), Gaps = 35/268 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52
           P  +   Q L   +         A           L+  +K      + D +     +  
Sbjct: 43  PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQKEVVDEILASQAELE 102

Query: 53  D---GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
               G  + S  E++  L   +        N       I        L +   I+   +S
Sbjct: 103 HKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 162

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK----- 156
           +L+    +A+ L  K  L +   ++         +     + G      +    +     
Sbjct: 163 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVINRLKAEN 222

Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
               +  + FH   +    +              E       I++  +GGG+        
Sbjct: 223 QLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELRELGAHIDFFDVGGGLAVDYDG-T 281

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
                  +     +Y+  I     +   
Sbjct: 282 RSQSSNSMNYGLHEYARNIVSTVSDVCN 309


>gi|15601570|ref|NP_233201.1| arginine decarboxylase [Vibrio cholerae O1 biovar eltor str.
           N16961]
 gi|121591146|ref|ZP_01678452.1| biosynthetic arginine decarboxylase [Vibrio cholerae 2740-80]
 gi|121729781|ref|ZP_01682218.1| biosynthetic arginine decarboxylase [Vibrio cholerae V52]
 gi|147672120|ref|YP_001215260.1| arginine decarboxylase [Vibrio cholerae O395]
 gi|229506032|ref|ZP_04395541.1| biosynthetic arginine decarboxylase [Vibrio cholerae BX 330286]
 gi|229510112|ref|ZP_04399592.1| biosynthetic arginine decarboxylase [Vibrio cholerae B33]
 gi|229517758|ref|ZP_04407203.1| biosynthetic arginine decarboxylase [Vibrio cholerae RC9]
 gi|229605563|ref|YP_002876267.1| arginine decarboxylase [Vibrio cholerae MJ-1236]
 gi|254849973|ref|ZP_05239323.1| arginine decarboxylase [Vibrio cholerae MO10]
 gi|298499604|ref|ZP_07009410.1| arginine decarboxylase [Vibrio cholerae MAK 757]
 gi|9658242|gb|AAF96713.1| biosynthetic arginine decarboxylase [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121546992|gb|EAX57136.1| biosynthetic arginine decarboxylase [Vibrio cholerae 2740-80]
 gi|121628478|gb|EAX60967.1| biosynthetic arginine decarboxylase [Vibrio cholerae V52]
 gi|146314503|gb|ABQ19043.1| biosynthetic arginine decarboxylase [Vibrio cholerae O395]
 gi|227015463|gb|ACP11672.1| biosynthetic arginine decarboxylase [Vibrio cholerae O395]
 gi|229345794|gb|EEO10767.1| biosynthetic arginine decarboxylase [Vibrio cholerae RC9]
 gi|229352557|gb|EEO17497.1| biosynthetic arginine decarboxylase [Vibrio cholerae B33]
 gi|229356383|gb|EEO21301.1| biosynthetic arginine decarboxylase [Vibrio cholerae BX 330286]
 gi|229372049|gb|ACQ62471.1| biosynthetic arginine decarboxylase [Vibrio cholerae MJ-1236]
 gi|254845678|gb|EET24092.1| arginine decarboxylase [Vibrio cholerae MO10]
 gi|297541585|gb|EFH77636.1| arginine decarboxylase [Vibrio cholerae MAK 757]
          Length = 661

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/268 (11%), Positives = 68/268 (25%), Gaps = 35/268 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52
           P  +   Q L   +         A           L+  +K      + D +     +  
Sbjct: 86  PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQKEVVDEILASQAELE 145

Query: 53  D---GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
               G  + S  E++  L   +        N       I        L +   I+   +S
Sbjct: 146 HKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 205

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK----- 156
           +L+    +A+ L  K  L +   ++         +     + G      +    +     
Sbjct: 206 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVINRLKAEN 265

Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
               +  + FH   +    +              E       I++  +GGG+        
Sbjct: 266 QLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELRELGAHIDFFDVGGGLAVDYDG-T 324

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
                  +     +Y+  I     +   
Sbjct: 325 RSQSSNSMNYGLHEYARNIVSTVSDVCN 352


>gi|48474667|sp|Q9KLD1|SPEA_VIBCH RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
          Length = 640

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/268 (11%), Positives = 68/268 (25%), Gaps = 35/268 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52
           P  +   Q L   +         A           L+  +K      + D +     +  
Sbjct: 65  PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQKEVVDEILASQAELE 124

Query: 53  D---GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
               G  + S  E++  L   +        N       I        L +   I+   +S
Sbjct: 125 HKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 184

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK----- 156
           +L+    +A+ L  K  L +   ++         +     + G      +    +     
Sbjct: 185 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVINRLKAEN 244

Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
               +  + FH   +    +              E       I++  +GGG+        
Sbjct: 245 QLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELRELGAHIDFFDVGGGLAVDYDG-T 303

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
                  +     +Y+  I     +   
Sbjct: 304 RSQSSNSMNYGLHEYARNIVSTVSDVCN 331


>gi|262403432|ref|ZP_06079990.1| biosynthetic arginine decarboxylase [Vibrio sp. RC586]
 gi|262349936|gb|EEY99071.1| biosynthetic arginine decarboxylase [Vibrio sp. RC586]
          Length = 654

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/268 (11%), Positives = 68/268 (25%), Gaps = 35/268 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52
           P  +   Q L   +         A           L+  +K      + D +     +  
Sbjct: 79  PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQREVVDEILASQAELE 138

Query: 53  D---GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
               G  + S  E++  L   +        N       I        L +   I+   +S
Sbjct: 139 HKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 198

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK----- 156
           +L+    +A+ L  K  L +   ++         +     + G      +    +     
Sbjct: 199 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVINRLKAEN 258

Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
               +  + FH   +    +              E       I++  +GGG+        
Sbjct: 259 QLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELRELGAHIDFFDVGGGLAVDYDG-T 317

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
                  +     +Y+  I     +   
Sbjct: 318 RSQSSNSMNYGLHEYARNIVSTVSDVCN 345


>gi|229514249|ref|ZP_04403710.1| biosynthetic arginine decarboxylase [Vibrio cholerae TMA 21]
 gi|229348229|gb|EEO13187.1| biosynthetic arginine decarboxylase [Vibrio cholerae TMA 21]
          Length = 661

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/268 (11%), Positives = 68/268 (25%), Gaps = 35/268 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52
           P  +   Q L   +         A           L+  +K      + D +     +  
Sbjct: 86  PVLVRFPQILHQRVHNICDAFNQAIEEYDYPNKYLLVYPIKVNQQREVVDEILASQAELE 145

Query: 53  D---GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
               G  + S  E++  L   +        N       I        L +   I+   +S
Sbjct: 146 HKQLGLEAGSKPELLAVLAMAQQASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 205

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIESEIK----- 156
           +L+    +A+ L  K  L +   ++         +     + G      +    +     
Sbjct: 206 ELDLVLKEAKSLGVKPRLGLRIRLASQGAGKWQSSGGEKSKFGLAASQVLTVINRLKAEN 265

Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
               +  + FH   +    +              E       I++  +GGG+        
Sbjct: 266 QLEALQLVHFHLGSQMANIRDVRNGVNEAVRFYCELRELGAHIDFFDVGGGLAVDYDG-T 324

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
                  +     +Y+  I     +   
Sbjct: 325 RSQSSNSMNYGLHEYARNIVSTVSDVCN 352


>gi|297517545|ref|ZP_06935931.1| arginine decarboxylase [Escherichia coli OP50]
          Length = 229

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 50/166 (30%), Gaps = 18/166 (10%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 61  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 120

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKF 107
             + S  E+M  L H          N       I        + +   ++   +S++   
Sbjct: 121 LEAGSKAELMAVLAHAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIV 180

Query: 108 KDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE 152
            D+A++L+    L +   ++         +     + G      ++
Sbjct: 181 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQ 226


>gi|212704456|ref|ZP_03312584.1| hypothetical protein DESPIG_02512 [Desulfovibrio piger ATCC 29098]
 gi|212672177|gb|EEB32660.1| hypothetical protein DESPIG_02512 [Desulfovibrio piger ATCC 29098]
          Length = 644

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/289 (12%), Positives = 78/289 (26%), Gaps = 48/289 (16%)

Query: 11  KQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD----GTTSS 58
           +  L + + +     + A          + +  +K      + + + Q+      G    
Sbjct: 78  ENILDSRIASLHESFRKAIKNLNYQGQYRGVFPIKVNQQQQVVEKIAQFGSRYHHGLEVG 137

Query: 59  SLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK------FKDKA 111
           S  E++         E       YKD E   +      + FN    L           ++
Sbjct: 138 SKAELIAAVSLMRDTEACIVCNGYKDEEFIDLGLQAQRLGFNLFFVLEMPSELDVLLSRS 197

Query: 112 QKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKIE--------SEIKNVNGLM 162
           ++L  +  + +   +S        D     S  G      ++          +     L 
Sbjct: 198 RELGIRPNIGVRAKLSVKASGHWTDSGGERSTFGLSPAQIVDVVDKLKACDMLDCFRLLH 257

Query: 163 FHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------------ 207
           +H   +    +           +          + ++ LGGG+                 
Sbjct: 258 YHLGSQVSNIRDIRTGVMEGARLYVGLVQEGAPMGYLDLGGGLAVDYDGSHTNYISSRNY 317

Query: 208 --DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDI 251
             D    D  + +    ++       I  E G A V   + L   VLD+
Sbjct: 318 NLDEYSADIVEAIMSILDEQQVPHPHIITESGRATVAYYSVLLFNVLDV 366


>gi|261266393|gb|ACX56223.1| arginine decarboxylase [Humulus lupulus]
          Length = 554

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/229 (12%), Positives = 64/229 (27%), Gaps = 33/229 (14%)

Query: 12  QKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSS 59
             L N L++                  + +  +K      + + + ++      G  + S
Sbjct: 34  DVLKNRLESLQSAFDIAIQSQDYENHYQGVYPMKFNQDRFVVEDIVKFGSPFRFGLEAGS 93

Query: 60  LYEVMLGHEKF---GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
             E++L    +     ++      +KD E  ++      +  NTV  L + ++    +  
Sbjct: 94  KPELLLAVSCYVQGSPDSFLVCNGFKDVEYISLALVARKLALNTVIVLEQEEELDLVIEL 153

Query: 117 KIGLRINPSVSY-------SKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGL 161
              L I P +                 +    + G      +              +  L
Sbjct: 154 SRKLSIRPVIGPRAKLRTKHSGHFGSTSGEKGKFGLTTTQILRVVRKLEQAGMLDYLQLL 213

Query: 162 MFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207
            FH   +  +        +    I  E       ++ I +GGG+     
Sbjct: 214 HFHIGSQIPTTALLADGVSEAAQIYCELVRLGAHMQVIDIGGGLGIDYD 262


>gi|218709231|ref|YP_002416852.1| arginine decarboxylase [Vibrio splendidus LGP32]
 gi|218322250|emb|CAV18374.1| Biosynthetic arginine decarboxylase [Vibrio splendidus LGP32]
          Length = 635

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/267 (12%), Positives = 75/267 (28%), Gaps = 35/267 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDT-------LN 49
           P  +   Q +   +         A           L+  +K      + D        L 
Sbjct: 60  PALVRFPQIVHQRVHNICNAFNQAIDEYQYDNRYLLVYPIKVNQQKEVVDEILASQAQLE 119

Query: 50  QYMDGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
           Q   G  + S  E++  L   +        N       I        L +   I+   +S
Sbjct: 120 QKQLGLEAGSKPELLAVLALAQKASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 179

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153
           +L+    +A+ L  K  L +   ++         +     + G      +        E 
Sbjct: 180 ELDLVLSEAKALGVKPRLGLRIRLASQGAGKWQASGGEKSKFGLSASQVLTVIERLKAED 239

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
           ++  +  + FH   +    +      +       E      Q++++ +GGG+        
Sbjct: 240 QLDVLELVHFHLGSQMANIRDVRNGVSEAARFYCELRDIGAQLKFLDVGGGLAVDYDG-T 298

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAI 237
                  +     +Y+  I +  G+  
Sbjct: 299 RSQSSNSMNYGLLEYARNIVMTVGDIC 325


>gi|209809065|ref|YP_002264603.1| arginine decarboxylase [Aliivibrio salmonicida LFI1238]
 gi|208010627|emb|CAQ81008.1| biosynthetic arginine decarboxylase [Aliivibrio salmonicida
           LFI1238]
          Length = 641

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/324 (10%), Positives = 83/324 (25%), Gaps = 43/324 (13%)

Query: 19  DTALYIRKNAGVKLLLALKCFAAWGMFDT-------LNQYMDGTTSSSLYEVM--LGHEK 69
                 +      L+  +K      + D        L Q   G  + S  E++  L   +
Sbjct: 88  QAIDEYQYENHYLLVYPIKVNQQKEVVDEILASQAQLEQKQLGLEAGSKPELLAVLALAQ 147

Query: 70  FGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                   N       +        L +   I+   +S+L+    +A+ L     L +  
Sbjct: 148 KASSVIVCNGYKDREYVRLALIGEKLGHSVFIVLEKLSELDLVLSEAKALGVTPRLGLRI 207

Query: 125 SVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NVNGLMFHNNCE---NKSF 172
            ++         +     + G      +    +         +  + FH   +    +  
Sbjct: 208 RLASQGAGKWQASGGEKSKFGLSASQVLTVIDRLKAQGQLDILELVHFHLGSQMANIRDV 267

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232
               +       E      +++++ +GGG+               +     +Y+  I   
Sbjct: 268 RNGVSEAARFYCELRDIGAELKYLDVGGGLAVDYDG-TRSQSSNSMNYGLTEYARNIV-- 324

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMV 292
                        TT+ DI +     + V  S                +          +
Sbjct: 325 -------------TTIGDICQLYSQPMPVIISESGRSLTAHHAVLITNVIGTESYTPEAI 371

Query: 293 CGRSCLAGDIFGE-FHFEKPVKIG 315
               C A  +    +   + ++ G
Sbjct: 372 EAPHCDAPLLLHNMWRNLEQLENG 395


>gi|148979434|ref|ZP_01815518.1| arginine decarboxylase [Vibrionales bacterium SWAT-3]
 gi|145961793|gb|EDK27087.1| arginine decarboxylase [Vibrionales bacterium SWAT-3]
          Length = 635

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/267 (12%), Positives = 75/267 (28%), Gaps = 35/267 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDT-------LN 49
           P  +   Q +   +         A           L+  +K      + D        L 
Sbjct: 60  PALVRFPQIVHQRVHNICNAFNQAIEEYQYDNRYLLVYPIKVNQQKEVVDEILASQAQLE 119

Query: 50  QYMDGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
           Q   G  + S  E++  L   +        N       I        L +   I+   +S
Sbjct: 120 QKQLGLEAGSKPELLAVLALAQKASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 179

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153
           +L+    +A+ L  K  L +   ++         +     + G      +        E 
Sbjct: 180 ELDLVLSEAKALGVKPRLGLRIRLASQGAGKWQASGGEKSKFGLSASQVLTVIERLKAED 239

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
           ++  +  + FH   +    +      +       E      Q++++ +GGG+        
Sbjct: 240 QLDVLELVHFHLGSQMANIRDVRNGVSEAARFYCELRDIGAQLKFLDVGGGLAVDYDG-T 298

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAI 237
                  +     +Y+  I +  G+  
Sbjct: 299 RSQSSNSMNYGLLEYARNIVMTVGDIC 325


>gi|86147538|ref|ZP_01065849.1| arginine decarboxylase [Vibrio sp. MED222]
 gi|85834706|gb|EAQ52853.1| arginine decarboxylase [Vibrio sp. MED222]
          Length = 629

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/267 (12%), Positives = 75/267 (28%), Gaps = 35/267 (13%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDT-------LN 49
           P  +   Q +   +         A           L+  +K      + D        L 
Sbjct: 54  PALVRFPQIVHQRVHNICNAFNQAIDEYQYDNRYLLVYPIKVNQQKEVVDEILASQAQLE 113

Query: 50  QYMDGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
           Q   G  + S  E++  L   +        N       I        L +   I+   +S
Sbjct: 114 QKQLGLEAGSKPELLAVLALAQKASSVIVCNGYKDREYIRLALIGEKLGHKVFIVLEKLS 173

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKI--------ES 153
           +L+    +A+ L  K  L +   ++         +     + G      +        E 
Sbjct: 174 ELDLVLSEAKALGVKPRLGLRIRLASQGAGKWQASGGEKSKFGLSASQVLTVIERLKAED 233

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
           ++  +  + FH   +    +      +       E      Q++++ +GGG+        
Sbjct: 234 QLDVLELVHFHLGSQMANIRDVRNGVSEAARFYCELRDIGAQLKFLDVGGGLAVDYDG-T 292

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAI 237
                  +     +Y+  I +  G+  
Sbjct: 293 RSQSSNSMNYGLLEYARNIVMTVGDIC 319


>gi|91793632|ref|YP_563283.1| arginine decarboxylase [Shewanella denitrificans OS217]
 gi|123166011|sp|Q12LW6|SPEA_SHEDO RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|91715634|gb|ABE55560.1| arginine decarboxylase [Shewanella denitrificans OS217]
          Length = 636

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 84/303 (27%), Gaps = 51/303 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMF-DTLNQYMD-- 53
           P  +   Q L + +++       A           L+  +K      +  + L   +   
Sbjct: 61  PVLVRFPQILHHRVESLCDAFNQAIQKYEYQNDYLLVYPIKVNQQKTVVEEILASQVSKE 120

Query: 54  ----GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
               G  + S  E+M  L   +        N       +        L +   I+   +S
Sbjct: 121 VPQLGLEAGSKPELMAVLAMAQKASSVIVCNGYKDKEYVRLALIGEKLGHKVYIVLEKMS 180

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------S 153
           +L    ++A++L     L +   +++        +     + G      ++        +
Sbjct: 181 ELKMVLEEARELGVTPRLGLRTRLAFQGKGKWQASGGEKSKFGLSAAQVLKVVDELKEAN 240

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207
            ++++  L FH   +    +      +       E       I    +GGG+        
Sbjct: 241 MLESLQLLHFHLGSQIANIRDIRQGVSEAGRFYCELRQLGASINCFDVGGGLAVDYDGTR 300

Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISE 253
                           +    L +   +Y   +     E G  +  +   L T V+    
Sbjct: 301 SQSNNSMNYGLTEYANNIVNVLTDLCNEYEQPMPRIISESGRHLTAHHAVLITDVIGTEA 360

Query: 254 NIK 256
            + 
Sbjct: 361 YMP 363


>gi|268316970|ref|YP_003290689.1| arginine decarboxylase [Rhodothermus marinus DSM 4252]
 gi|262334504|gb|ACY48301.1| arginine decarboxylase [Rhodothermus marinus DSM 4252]
          Length = 653

 Score = 47.8 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/316 (10%), Positives = 69/316 (21%), Gaps = 53/316 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLA--------LKCFAAWGMFDTLNQYMD--- 53
           P  L  +  L   +       + A  +   A        +K      + + + +      
Sbjct: 71  PVLLRFQDLLRTRVQQLNRAFRRAIAETGYANTYRGVYPIKVNQLREVVEEILEAGAPFS 130

Query: 54  -GTTSSSLYEVMLGHEKFGGETH--AYNVAYKDCEIDAVLSNC-----DTIIFNTVSQLN 105
            G    S  E++        +      N       +  +L+          +   +++  
Sbjct: 131 FGLECGSKSELLATLPYLDRDDMLLICNGCKDRAMMQLILAGQRLGKKVIPVIERMAEFR 190

Query: 106 KFKDK------------AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES 153
              +             A    +         +                      D+I  
Sbjct: 191 LLLEALEDRSLPQAGVPAIFGVRLRLSATGAGLWSESGGETSKFGLSLSELLGLLDRIGD 250

Query: 154 EIKNVNGL--MFHNNCENKSFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDK- 207
               V+     FH   +                I          I ++ +GGG+  T + 
Sbjct: 251 GHSGVSLQLLHFHMGSQIAHLAHIREAVTEAARIYARLRKRGLGITYLDIGGGLGVTYEA 310

Query: 208 --------------DYPVKDFCQRLKEFSEKYSVQIYL--EPGEAIVTNTTTLNTTVLDI 251
                         +Y         +    +      L  E G A+    +   T VLD 
Sbjct: 311 GNPDAPGSIDYSLGEYAHTVVATVQQVCEAEGVPPPVLISESGRALTAYHSVFVTEVLDT 370

Query: 252 SENIKNLVIVDSSVEA 267
                 L    +    
Sbjct: 371 RSRHYELPAWANGGIH 386


>gi|317152609|ref|YP_004120657.1| arginine decarboxylase [Desulfovibrio aespoeensis Aspo-2]
 gi|316942860|gb|ADU61911.1| arginine decarboxylase [Desulfovibrio aespoeensis Aspo-2]
          Length = 637

 Score = 47.4 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/228 (11%), Positives = 65/228 (28%), Gaps = 24/228 (10%)

Query: 14  LLNNLDTALYIRKNAG-VKLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLGHE 68
           +  N  +A+      G       +K      + + + ++      G  + S  E++    
Sbjct: 81  INENFRSAIKSLGYRGSYLGAYPIKVNQQQQVVEAVTRHGKKYHHGLEAGSKAELVAAMG 140

Query: 69  KF-GGETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                E       YKD E   +  +         ++     +L    ++++    K  L 
Sbjct: 141 MLRDTEAVLVCNGYKDEEFIDLGLHATQLGFTCILVVEMPGELPLIIERSKAKKVKPILG 200

Query: 122 INPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------SEIKNVNGLMFHNNCENKSF 172
           +   +S     L   +       G      I+          +  +  L +H   +  + 
Sbjct: 201 VRVKLSTQANGLWAESGGDRSIFGLNATQIIDVIDRLKEADMLDCLQLLHYHLGSQIPNI 260

Query: 173 LCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVKDFCQR 217
               + +    + +        Q+ ++ LGGG+              R
Sbjct: 261 REIRSAVAEASRVYAGIVAEGAQMRYLDLGGGLAVDYDGTQTNFMSSR 308


>gi|320100688|ref|YP_004176280.1| arginine decarboxylase [Desulfurococcus mucosus DSM 2162]
 gi|319753040|gb|ADV64798.1| arginine decarboxylase [Desulfurococcus mucosus DSM 2162]
          Length = 601

 Score = 47.4 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/256 (14%), Positives = 73/256 (28%), Gaps = 31/256 (12%)

Query: 29  GVKLLLALKCFAAWGMFDTL----NQYMDGTTSSSLYEVMLG--HEKFGGETHAYNVAYK 82
           G++ +  +K      + D +     +Y  G  + S+ E+ L   +   G     Y+    
Sbjct: 102 GLQPVFPMKVNPIDIVIDAIWRYGEKYGWGFNTGSIGELELLSKYAGKGPRILVYDGVLS 161

Query: 83  DCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPF 140
           D               +   V   +     ++    ++GLRI P         A      
Sbjct: 162 DNVARILEGFREKGWRVVVDVESEHDLDILSKHPELEVGLRIKPLFKPGG-KWAHSAGLE 220

Query: 141 SRLGEKCKDK--IESEIKNVN----GLMFHNNCENKSFLCFSAMLKNIEKEF----GHFI 190
            + G        +  E K +      L  H   +   +    A +  +   +     +  
Sbjct: 221 GKFGLTVNTLVKLREEYKWIEERARLLHVHAGSQIYKWSDVEAFINEVYNIYVQLTANGF 280

Query: 191 TQIEWISLGGGIHFTDKDY-------PVKDFCQRLKEFSE-----KYSVQIYLEPGEAIV 238
           +++E +  GGG+ +   D        P                       +  E G  IV
Sbjct: 281 SRLELVDPGGGLAYPYLDTRSGSIESPDYTVVDYFNHMLRVFSRLDKHPVLVYEGGRYIV 340

Query: 239 TNTTTLNTTVLDISEN 254
                +   V+D+   
Sbjct: 341 AAHRIVVAKVVDVRPY 356


>gi|88857270|ref|ZP_01131913.1| arginine decarboxylase, PLP-binding, biosynthetic
           [Pseudoalteromonas tunicata D2]
 gi|88820467|gb|EAR30279.1| arginine decarboxylase, PLP-binding, biosynthetic
           [Pseudoalteromonas tunicata D2]
          Length = 637

 Score = 47.4 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 75/303 (24%), Gaps = 51/303 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +   Q L N +         A           L+  +K      + + +        
Sbjct: 62  PALVRFPQILHNRVHNLCAAFNEAIANYNYPEKYLLVYPIKVNQQREVVEEIVASQANNE 121

Query: 54  ----GTTSSSLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFK 108
               G  + S  E++          +      YKD E   +    + +       L K  
Sbjct: 122 VKQLGLEAGSKAELLAVLAMAQKASSVIVCNGYKDVEYIRLALIGEKLGHKVNIVLEKLS 181

Query: 109 DKAQKLHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           +    L +   L ++P         S  K          S+ G      +          
Sbjct: 182 ELDMVLAEAEKLNVSPRLGLRVRLASQGKGKWQASGGEKSKFGLSASQVLTVLKKLKDLG 241

Query: 156 --KNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207
               +  + FH   +    +      +       E      ++  + +GGG+        
Sbjct: 242 KSDTLQLVHFHLGSQMANIRDVRTGVSEAARFYCELRRLGAELVCMDVGGGLAIDYDGTR 301

Query: 208 -------DYPVKDFCQRLKEFSEKYSVQI-------YLEPGEAIVTNTTTLNTTVLDISE 253
                  +Y + ++   +         Q          E G A+  +   L + V+    
Sbjct: 302 SQSHNSMNYSLAEYANNIVYTIGDICKQYNQPMPTIISESGRALTAHHAVLISNVIGTES 361

Query: 254 NIK 256
              
Sbjct: 362 YNP 364


>gi|258510371|ref|YP_003183805.1| alanine racemase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257477097|gb|ACV57416.1| alanine racemase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 400

 Score = 47.4 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/338 (11%), Positives = 75/338 (22%), Gaps = 33/338 (9%)

Query: 5   PYY-LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAA----WGMF-DTLNQYMDGTTSS 58
           P + +ID   L +N+          G  L++A+K  A       +    + + +     +
Sbjct: 4   PLFAVIDLAHLSHNIRYLKSRL-RPGASLMVAVKADAYGHGVRAVVGRLVREGVHHVAVA 62

Query: 59  SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           SL E +       G       A               I    +S +++     ++L   +
Sbjct: 63  SLEEALEIRAFHRGVNILVLGAVTPDACMKAAEAEVEIALTDLSPIDEIPRLPKRLRVHL 122

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
            L    +    K          +    +  + + +      G                 M
Sbjct: 123 PLDTGMNRLGVKRTDEAVALARAIAKREDLELVGA------GTHLAAADAEDPAHAAGQM 176

Query: 179 LKNIEKE--FGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
            +             +   I  G                  ++     Y          A
Sbjct: 177 ERLGAFVRALEQAGLRPPRIHAGNSAALLR---NPAWHLDMVRVGIAAYGYSPDPSVLPA 233

Query: 237 IVTNTTTL-NTTVLDISENIKNLVIVDSSVEAHVPDYL-------LYQESATIYPNTGPY 288
                       VL +++      +   +                          N G  
Sbjct: 234 PSLRPVMSLYAGVLRVAQAQPGETVGYGATFTVTRPMTIATVAGGYADGYPRHLSNEGEV 293

Query: 289 TA-----MVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321
                   V GR C   D          V  GD ++  
Sbjct: 294 LVRGEFRPVIGRVC--MDQLMVDVTGLDVATGDVVALF 329


>gi|238504745|ref|XP_002383603.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
 gi|317155184|ref|XP_001824975.2| metal-activated pyridoxal enzyme [Aspergillus oryzae RIB40]
 gi|220689717|gb|EED46067.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
          Length = 367

 Score = 47.4 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/213 (10%), Positives = 53/213 (24%), Gaps = 15/213 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTS--S 58
           + TP  ++D   +  N+          G+ +   LK   +  +   L      G      
Sbjct: 13  LDTPSMIVDLDLMEANIKKLFDSLLPTGLNIRPHLKTTKSAILAQKLAAAGAKGCCVAKV 72

Query: 59  SLYEVMLGHEKFGGETHAYNVAYKDCEID----AVLSNCDTIIFNTVSQLNKFKDKAQKL 114
           S  E +     F        +  +                 I+ ++        +   + 
Sbjct: 73  SEAEAITA-AGFDDILITCEIIGEPKVKRLVELFKKHKKIRIVVDSEVGATAISNALAQA 131

Query: 115 HKKIGLRINPSVSYSKFI-LADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFL 173
                + +   +            +    L    K+  +  +  V G   H    +    
Sbjct: 132 GVAEPISVLIDLDVGLHRTGVANAQAALALARHIKNLRQLRLIGVQGYEGHLQHLHSWED 191

Query: 174 CFSAMLK------NIEKEFGHFITQIEWISLGG 200
                L+      +      +    IE ++ GG
Sbjct: 192 RKKQCLESMKILTDTATLLRNEGFNIEVVTTGG 224


>gi|117620250|ref|YP_856149.1| arginine decarboxylase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
 gi|166200063|sp|A0KIP8|SPEA_AERHH RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|117561657|gb|ABK38605.1| arginine decarboxylase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 633

 Score = 47.4 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/266 (13%), Positives = 73/266 (27%), Gaps = 33/266 (12%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD-- 53
           TP  L     L + +D        A            +  +K      + +T++Q     
Sbjct: 60  TPVLLRFPDILKSRVDALFNAFGQAIEKSGYEGDYLCVYPIKVNQQRRVIETISQSYSDK 119

Query: 54  ---GTTSSSLYEVMLGHEKFG--GETHAYNVAYKDCEIDAV-----LSNCDTIIFNTVSQ 103
              G  + S  E++         G     N       I        + +   I+    S+
Sbjct: 120 PRLGLEAGSKPELLAVLSHHHEQGSVIVCNGYKDREYIRHALLGNLMGHKVYIVVEKPSE 179

Query: 104 LNKFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEIK------ 156
           L    D++ +L+ K  + +     S    +        S+ G      +    +      
Sbjct: 180 LEMVLDESARLNIKPNIGVRAKLASTGSGMWESSGGSMSKFGLSASQILALIERLRGLGK 239

Query: 157 --NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
              +  L FH   +    +              E       IE + +GGG+    +    
Sbjct: 240 LDCLQLLHFHLGSQIANIRDIQGGIRECGRFYAELRRLGANIEVVDVGGGLGVDYEGTRS 299

Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAI 237
           +  C        +Y+  +    G+  
Sbjct: 300 QSHCSA-NYSLSEYANNVVWGIGDVC 324


>gi|306845963|ref|ZP_07478530.1| metal-activated pyridoxal protein [Brucella sp. BO1]
 gi|306273598|gb|EFM55443.1| metal-activated pyridoxal protein [Brucella sp. BO1]
          Length = 355

 Score = 47.4 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 52/324 (16%), Positives = 89/324 (27%), Gaps = 15/324 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           + TP  L+D  +++ N++ A      AGVKL   +K            +    G T   L
Sbjct: 11  VDTPAILVDVDRVVANIEKAQAHADAAGVKLRPHIKTHKLPFFARMQVKAGAVGITCQKL 70

Query: 61  YEVM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E   +           YN+  ++        +    I  TV         AQ    +  
Sbjct: 71  GEAEVMADAGLTDIFLPYNILGQEKLDRLHALHRRITISVTVDNETSLAGLAQHFMNEKR 130

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
                    +         P           I  +   +                    L
Sbjct: 131 PLKVLVECDTGMGRCGVQTPGQARELAR---IIEKSAGLCFGGLMTYPATGRADEAERWL 187

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
           +             E IS GG         P +      +  +  Y  +  +  G A + 
Sbjct: 188 REARDLLAADGIACETISSGGT--PDMWRIPAETVVTEYRPGTYIYFDRYQVAEGAATIN 245

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLA 299
           +        + +S       I+D+  +A   D L   +   +        A V G S   
Sbjct: 246 DCALTVLATV-VSHPTPERAIIDAGSKALSSDTLGLADFGELMDRP---LARVTGLSEEH 301

Query: 300 GDIFGEFHFEKPVKIGDRI-SFED 322
           G + G+      + IGDR+    D
Sbjct: 302 GKVTGDV---ANLNIGDRVRVIPD 322


>gi|325849932|ref|ZP_08170971.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein
           [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325479956|gb|EGC83039.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein
           [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 246

 Score = 47.4 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 67/211 (31%), Gaps = 30/211 (14%)

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIKNVNGLMFHNNCE 168
             L INP V          +   S+ G   +D          IE+   N+ G   H   +
Sbjct: 36  CLLSINPDVKTDTHKFIQTSNADSKFGLNIRDENTEKIIEKIIENPNINLLGFHAHIGSQ 95

Query: 169 NKSFLCFS----AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEK 224
            K+   F      M    +     F      ++LGGG    +         ++  +    
Sbjct: 96  VKNLEFFKEEAKIMADFTKNIQDKFKKCFSHLNLGGGFGTRENLEDEDLDLEKFLKGLIV 155

Query: 225 YSVQIY-----------LEPGEAIVTNTTTLNTTVLD--ISENIKNLVIVDSSVEAHVPD 271
           +   ++           +EPG ++++   ++   V    ++     L+ VD  +  ++  
Sbjct: 156 FMEDLFEKNKLSITNLSIEPGRSLISKVGSILYRVGSTKVTMEGYPLIFVDGGMSDNIRP 215

Query: 272 YLLYQESATIY----PNTGPYTAMVCGRSCL 298
            L     + I      N    T  V G+ C 
Sbjct: 216 SLYGARYSAILANKLDNEKNQTYRVGGKLCE 246


>gi|302387296|ref|YP_003823118.1| alanine racemase domain protein [Clostridium saccharolyticum WM1]
 gi|302197924|gb|ADL05495.1| alanine racemase domain protein [Clostridium saccharolyticum WM1]
          Length = 373

 Score = 47.4 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 53/216 (24%), Gaps = 22/216 (10%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           ++TP  +ID      N+         AG +L   +K                 G T + +
Sbjct: 11  LETPCLVIDVDLAEKNIRRMQDAADKAGCRLRPHIKTHKMPLFAQMQEMAGASGITCAKV 70

Query: 61  YEVMLGHEKFGGETHAYNVAY------KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114
            E        G E              +     A       +  +++         A   
Sbjct: 71  SEAE-VMADGGMEDIFIAYPMIGRFRIRRAMDLAERIRRLILAIDSLEGAKALDQAASDR 129

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL---------MFHN 165
              + +R+       +  +        R  E      E +  N+ G+             
Sbjct: 130 DVVLEVRMEIDTGAGRTGVPM-----ERAVELALAVKEMKHLNLTGIFTFKSLILSGKPT 184

Query: 166 NCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGG 201
                +      M+    +       +I+ IS G  
Sbjct: 185 EDNLLAAQEEGNMMAETARMLKEAGVEIQDISAGSS 220


>gi|3421151|gb|AAC68516.1| arginine decarboxylase [Brassica nigra]
 gi|3421155|gb|AAC68517.1| arginine decarboxylase [Brassica oleracea]
          Length = 403

 Score = 47.1 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 34/277 (12%), Positives = 77/277 (27%), Gaps = 29/277 (10%)

Query: 30  VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82
            + +  +K      + + + ++      G  + S  E++L          +       +K
Sbjct: 1   YQGVYPVKGNQDRFVVEDIVRFGSQFRFGLEAGSKPEILLAMSCLCKGNPDAFLVCNGFK 60

Query: 83  DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134
           D E   +            I+     +L+   D +QK++ +   GLR      +S    +
Sbjct: 61  DAEYIFLALLGRKLALNTVIVLEQEEELDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGS 120

Query: 135 DPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKS---FLCFSAMLKNIE 183
                  + G      +              +  L FH   +  S        A    + 
Sbjct: 121 TSGEKG-KFGLTTTQIVRVMRKLSQSGMLDCLQLLHFHIGSQIPSTSLLSDGVAEAAQLY 179

Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243
            E       ++ I +GGG+          +    +    E+Y+  +        V +  +
Sbjct: 180 CELVRLGAHMKVIDIGGGLGIDYDGSKSGESDLSVAYTLEEYAEAVVASVR--FVCDRRS 237

Query: 244 LNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280
           +   V+        +      +   V         A 
Sbjct: 238 VKHPVICSESGRAIVSHHSVLIFEAVSAVKPMAHQAN 274


>gi|330828933|ref|YP_004391885.1| Biosynthetic arginine decarboxylase [Aeromonas veronii B565]
 gi|328804069|gb|AEB49268.1| Biosynthetic arginine decarboxylase [Aeromonas veronii B565]
          Length = 624

 Score = 47.1 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/266 (13%), Positives = 73/266 (27%), Gaps = 33/266 (12%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD-- 53
           TP  L     L + +D        A            +  +K      + +T++Q     
Sbjct: 51  TPVLLRFPDILKSRVDALFNAFGQAIEKSGYEGDYLCVYPIKVNQQRRVIETISQSYSDK 110

Query: 54  ---GTTSSSLYEVMLGHEKFG--GETHAYNVAYKDCEIDAV-----LSNCDTIIFNTVSQ 103
              G  + S  E++         G     N       I        + +   I+    S+
Sbjct: 111 PRLGLEAGSKPELLAVLSHHHEQGSVIVCNGYKDREYIRHALLGNLMGHKVYIVVEKPSE 170

Query: 104 LNKFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEIK------ 156
           L    D++ +L+ K  + +     S    +        S+ G      +    +      
Sbjct: 171 LEMVLDESARLNIKPNIGVRAKLASTGSGMWESSGGSMSKFGLSASQILALIERLRGLGK 230

Query: 157 --NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
              +  L FH   +    +              E       IE + +GGG+    +    
Sbjct: 231 LDCLQLLHFHLGSQIANIRDIQGGIRECGRFYAELRRLGANIEVVDVGGGLGVDYEGTRS 290

Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAI 237
           +  C        +Y+  +    G+  
Sbjct: 291 QSHCSA-NYSLSEYANNVVWGIGDVC 315


>gi|239815227|ref|YP_002944137.1| alanine racemase domain protein [Variovorax paradoxus S110]
 gi|239801804|gb|ACS18871.1| alanine racemase domain protein [Variovorax paradoxus S110]
          Length = 381

 Score = 47.1 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 48/186 (25%), Gaps = 8/186 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  L+D   L  N++      K  GV L   +K   +  +    +     G +  +L
Sbjct: 21  LDTPALLLDLGALTRNIERMAAFAKARGVGLRPHVKTHKSVEIARRQVAAGAIGVSCVTL 80

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVS-----QLNKFKDKAQKLH 115
            E  +  +    +    + A    +I  V+          +        N     A  L 
Sbjct: 81  GEAEVMVKAGIPDVLITSPAVTPSKIARVVKLARLAGPGGMMVVVDDPRNAADLAAATLG 140

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175
               L +                  +++ E  +         + GL  +           
Sbjct: 141 LPHPLEVLVDYGAG--YNRTGAASEAQVLELARRIAAEPRLKLRGLQAYAGNLQHIVDRE 198

Query: 176 SAMLKN 181
                 
Sbjct: 199 QRSAAA 204


>gi|114569759|ref|YP_756439.1| alanine racemase [Maricaulis maris MCS10]
 gi|114340221|gb|ABI65501.1| alanine racemase [Maricaulis maris MCS10]
          Length = 366

 Score = 47.1 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 37/337 (10%), Positives = 76/337 (22%), Gaps = 37/337 (10%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYMD----GTT 56
           P  +ID   +  N      +   A V  +  +K       A  +   L            
Sbjct: 15  PRLIIDLAAIKRNYAALQTLAPTASVGAV--VKANGYGLGAAQVVPALADAGCRCFYVAH 72

Query: 57  SSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
           +S   E          +   +N  +   E+  +       + N + QL   +  A     
Sbjct: 73  TSEAREAREALAGRPADIFVFN-GFWPSELAELRQLSLFPVINDLQQLEDLRALA--PDL 129

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
              +  +  +S         +   +        +I++            + +    L   
Sbjct: 130 PCAIHFDTGMSRLG-----LDAAETEALLADPARIDALDVRQIMSHLACSDDPDHPLNEQ 184

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
              +                +  G +      + +      L             EP  A
Sbjct: 185 QRQRFERIRHALPGIPASLSNSTGTLLGQAYHFDMLRPGLALFSGMPAPGQASPFEPVVA 244

Query: 237 IVTNT-TTLNTTVLDISENIKNLVIVDS---------SVEAHVPDYLLYQESATIYPNTG 286
           I             D                        +  +  +             G
Sbjct: 245 IDAPILQIRTLQPGDTVGYGACWTADRPRRVATVAAGYADGLLRAFGNGGY-----GRIG 299

Query: 287 PYTAMVCGRSCLAGDIFGEFHF--EKPVKIGDRISFE 321
                + GR   + D+        E+PV+ GD + F 
Sbjct: 300 ETQVPILGRV--SMDLICVDIDAVEEPVRPGDPVRFL 334


>gi|306841724|ref|ZP_07474411.1| metal-activated pyridoxal protein [Brucella sp. BO2]
 gi|306288254|gb|EFM59638.1| metal-activated pyridoxal protein [Brucella sp. BO2]
          Length = 355

 Score = 47.1 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 52/324 (16%), Positives = 90/324 (27%), Gaps = 15/324 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           + TP  L+D  +++ N++ A      AGVKL   +K            +    G T   L
Sbjct: 11  VDTPAILVDVDRVVANIEKAQAHADAAGVKLRPHIKTHKLPFFARMQVKAGAVGITCQKL 70

Query: 61  YEVM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E   +           YN+  ++        +    I  TV         AQ+   +  
Sbjct: 71  GEAEVMADAGLTDIFLPYNILGQEKLDRLHALHRRITISVTVDNKTSLAGLAQRFMNEKR 130

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
                    +         P           I  +   +                    L
Sbjct: 131 PLKVLVECDTGMGRCGVQTPGQARELAR---IIEKSAGLCFGGLMTYPATGRADEAERWL 187

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
           +             E IS GG         P +      +  +  Y  +  +  G A + 
Sbjct: 188 RAARDLLAADGIACETISSGGT--PDMWRIPAETVVTEYRPGTYIYFDRYQVAEGAATIN 245

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLA 299
           +        + +S       I+D+  +A   D L   +   +        A V G S   
Sbjct: 246 DCALTVLATV-VSHPTPERAIIDAGSKALSSDTLGLADFGELMDRP---LARVTGLSEEH 301

Query: 300 GDIFGEFHFEKPVKIGDRI-SFED 322
           G + G+      + IGDR+    D
Sbjct: 302 GKVTGDV---ANLNIGDRVRVIPD 322


>gi|224417721|ref|ZP_03655727.1| arginine decarboxylase [Helicobacter canadensis MIT 98-5491]
 gi|253827066|ref|ZP_04869951.1| arginine decarboxylase [Helicobacter canadensis MIT 98-5491]
 gi|313141263|ref|ZP_07803456.1| arginine decarboxylase [Helicobacter canadensis MIT 98-5491]
 gi|253510472|gb|EES89131.1| arginine decarboxylase [Helicobacter canadensis MIT 98-5491]
 gi|313130294|gb|EFR47911.1| arginine decarboxylase [Helicobacter canadensis MIT 98-5491]
          Length = 618

 Score = 47.1 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/299 (10%), Positives = 79/299 (26%), Gaps = 47/299 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTLNQYMD-- 53
           P  +     +   ++      +N+          K +  +K       +   + Q  +  
Sbjct: 46  PLLIRFPHLMKKQVEKIFSHFENSIKEYHYKGKFKAVFPIKVNHFPNFILPLMEQTQNRC 105

Query: 54  -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-- 110
            G  + S  E+++               +KD E+ ++      +  +    +    +   
Sbjct: 106 YGLEAGSKSELIIAMAYTNENAPITVNGFKDKEMISLGFIAAKMGHDITLTIEGLNELET 165

Query: 111 ------AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------K 156
                 A               S    I A      S+ G    + +E+          +
Sbjct: 166 IIEVAKAMGKPYPKIGLRIRLHSTGVGIWAKSGGINSKFGLTATELVEAIYLLQKNKLLE 225

Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPVK 212
               + FH   +          L+     +          +  +++GGG+      Y   
Sbjct: 226 QFTMIHFHIGSQISDIAPLKKALREAGNIYAELRKMGAKNLNNVNIGGGLAVEYTQYEAY 285

Query: 213 DFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                               + +  ++    I++E G  +  +   L + VL++     
Sbjct: 286 QNRNYTLGEFSGNVIFTLKEIAKNKKEPEPDIFIESGRYVSASHAVLISPVLELFSQEY 344


>gi|114562874|ref|YP_750387.1| arginine decarboxylase [Shewanella frigidimarina NCIMB 400]
 gi|122299985|sp|Q083L6|SPEA_SHEFN RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|114334167|gb|ABI71549.1| arginine decarboxylase [Shewanella frigidimarina NCIMB 400]
          Length = 636

 Score = 47.1 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 38/312 (12%), Positives = 88/312 (28%), Gaps = 51/312 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL-----NQY 51
           P  +   Q L + +++      +A           L+  +K      + + +     ++ 
Sbjct: 61  PVLVRFPQILHHRVESLCEAFNDAIKKYDYQNDYLLVYPIKVNQQKTVVEEILASQKSKE 120

Query: 52  M--DGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
           +   G  + S  E+M  L   +        N       I        L +   I+   +S
Sbjct: 121 VPQLGLEAGSKPELMAVLAMAQKASSVIVCNGYKDKEYIRLALIGEKLGHKVYIVLEKMS 180

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------S 153
           +L     +A+KL     L +   +++        +     + G      ++        +
Sbjct: 181 ELKMVLIEAEKLGITPRLGLRVRLAFQGKGKWQASGGEKSKFGLSAAQVLKVIAELKSAN 240

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207
            + ++  L FH   +    +      +       E       I+   +GGG+        
Sbjct: 241 MLDSLQLLHFHLGSQIANIRDIRQGVSEAGRFYCELRQLGASIDCFDVGGGLAVDYDGTR 300

Query: 208 -----------DYPVKDFCQRLKEFSEKYSVQI---YLEPGEAIVTNTTTLNTTVLDISE 253
                      +    +    L +   +Y   +     E G  +  +   L T V+    
Sbjct: 301 SQSNNSMNYGLNEYANNIVNVLTDLCNEYEQPMPRIISESGRHLTAHHAVLITDVIGTEA 360

Query: 254 NIKNLVIVDSSV 265
                +   S  
Sbjct: 361 YQPENIQEPSED 372


>gi|328470011|gb|EGF40922.1| arginine decarboxylase [Vibrio parahaemolyticus 10329]
          Length = 636

 Score = 47.1 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/248 (11%), Positives = 65/248 (26%), Gaps = 27/248 (10%)

Query: 19  DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-------GTTSSSLYEVM--LGHEK 69
                 +      L+  +K      + D +            G  + S  E++  L   +
Sbjct: 83  QAIEEYQYPNKYLLVYPIKVNQQREVVDEILASQAQLETKQLGLEAGSKPELLAVLALAQ 142

Query: 70  FGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
            G      N       +        L +   I+   +S+L+   ++A+ L  K  L +  
Sbjct: 143 QGSSVIVCNGYKDREYVRLALIGEKLGHKVFIVLEKLSELDLVLEEAKSLGVKPRLGLRI 202

Query: 125 SVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NVNGLMFHNNCE---NKSF 172
            ++         +     + G      +    +         +  + FH   +    +  
Sbjct: 203 RLASQGAGKWQASGGEKSKFGLSASQVLSVIERLKREGSLDAMQLVHFHLGSQMANIRDV 262

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232
                       E       IE+  +GGG+               +     +Y+  I   
Sbjct: 263 RNGVNESARFYCELRALGANIEYFDVGGGLAVDYDG-TRSQSSNSMNYGLAEYARNIVNT 321

Query: 233 PGEAIVTN 240
            G+     
Sbjct: 322 VGDVCQQY 329


>gi|308095303|ref|ZP_05904841.2| arginine 2-monooxygenase [Vibrio parahaemolyticus Peru-466]
 gi|308085161|gb|EFO34856.1| arginine 2-monooxygenase [Vibrio parahaemolyticus Peru-466]
          Length = 636

 Score = 47.1 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/248 (11%), Positives = 65/248 (26%), Gaps = 27/248 (10%)

Query: 19  DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-------GTTSSSLYEVM--LGHEK 69
                 +      L+  +K      + D +            G  + S  E++  L   +
Sbjct: 83  QAIEEYQYPNKYLLVYPIKVNQQREVVDEILASQAQLETKQLGLEAGSKPELLAVLALAQ 142

Query: 70  FGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
            G      N       +        L +   I+   +S+L+   ++A+ L  K  L +  
Sbjct: 143 QGSSVIVCNGYKDREYVRLALIGEKLGHKVFIVLEKLSELDLVLEEAKSLGVKPRLGLRI 202

Query: 125 SVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NVNGLMFHNNCE---NKSF 172
            ++         +     + G      +    +         +  + FH   +    +  
Sbjct: 203 RLASQGAGKWQASGGEKSKFGLSASQVLSVIERLKREGSLDAMQLVHFHLGSQMANIRDV 262

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232
                       E       IE+  +GGG+               +     +Y+  I   
Sbjct: 263 RNGVNESARFYCELRALGANIEYFDVGGGLAVDYDG-TRSQSSNSMNYGLAEYARNIVNT 321

Query: 233 PGEAIVTN 240
            G+     
Sbjct: 322 VGDVCQQY 329


>gi|28900025|ref|NP_799680.1| arginine decarboxylase [Vibrio parahaemolyticus RIMD 2210633]
 gi|153837551|ref|ZP_01990218.1| arginine decarboxylase [Vibrio parahaemolyticus AQ3810]
 gi|260365955|ref|ZP_05778442.1| arginine 2-monooxygenase [Vibrio parahaemolyticus K5030]
 gi|260899760|ref|ZP_05908155.1| arginine 2-monooxygenase [Vibrio parahaemolyticus AQ4037]
 gi|308094977|ref|ZP_05892959.2| arginine 2-monooxygenase [Vibrio parahaemolyticus AN-5034]
 gi|48474828|sp|Q87JS8|SPEA_VIBPA RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|28808308|dbj|BAC61513.1| biosynthetic arginine decarboxylase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149749147|gb|EDM59952.1| arginine decarboxylase [Vibrio parahaemolyticus AQ3810]
 gi|308092545|gb|EFO42240.1| arginine 2-monooxygenase [Vibrio parahaemolyticus AN-5034]
 gi|308110386|gb|EFO47926.1| arginine 2-monooxygenase [Vibrio parahaemolyticus AQ4037]
 gi|308112871|gb|EFO50411.1| arginine 2-monooxygenase [Vibrio parahaemolyticus K5030]
          Length = 640

 Score = 47.1 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/248 (11%), Positives = 65/248 (26%), Gaps = 27/248 (10%)

Query: 19  DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-------GTTSSSLYEVM--LGHEK 69
                 +      L+  +K      + D +            G  + S  E++  L   +
Sbjct: 87  QAIEEYQYPNKYLLVYPIKVNQQREVVDEILASQAQLETKQLGLEAGSKPELLAVLALAQ 146

Query: 70  FGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
            G      N       +        L +   I+   +S+L+   ++A+ L  K  L +  
Sbjct: 147 QGSSVIVCNGYKDREYVRLALIGEKLGHKVFIVLEKLSELDLVLEEAKSLGVKPRLGLRI 206

Query: 125 SVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NVNGLMFHNNCE---NKSF 172
            ++         +     + G      +    +         +  + FH   +    +  
Sbjct: 207 RLASQGAGKWQASGGEKSKFGLSASQVLSVIERLKREGSLDAMQLVHFHLGSQMANIRDV 266

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232
                       E       IE+  +GGG+               +     +Y+  I   
Sbjct: 267 RNGVNESARFYCELRALGANIEYFDVGGGLAVDYDG-TRSQSSNSMNYGLAEYARNIVNT 325

Query: 233 PGEAIVTN 240
            G+     
Sbjct: 326 VGDVCQQY 333


>gi|254227886|ref|ZP_04921316.1| arginine decarboxylase [Vibrio sp. Ex25]
 gi|262396126|ref|YP_003287979.1| biosynthetic arginine decarboxylase [Vibrio sp. Ex25]
 gi|151939382|gb|EDN58210.1| arginine decarboxylase [Vibrio sp. Ex25]
 gi|262339720|gb|ACY53514.1| biosynthetic arginine decarboxylase [Vibrio sp. Ex25]
          Length = 640

 Score = 47.1 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/248 (11%), Positives = 65/248 (26%), Gaps = 27/248 (10%)

Query: 19  DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-------GTTSSSLYEVM--LGHEK 69
                 +      L+  +K      + D +            G  + S  E++  L   +
Sbjct: 87  QAIEEYQYPNKYLLVYPIKVNQQREVVDEILASQAQLETKQLGLEAGSKPELLAVLALAQ 146

Query: 70  FGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
            G      N       +        L +   I+   +S+L+   ++A+ L  K  L +  
Sbjct: 147 QGSSVIVCNGYKDREYVRLALIGEKLGHKVFIVLEKLSELDLVLEEAKSLGVKPRLGLRI 206

Query: 125 SVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NVNGLMFHNNCE---NKSF 172
            ++         +     + G      +    +         +  + FH   +    +  
Sbjct: 207 RLASQGAGKWQASGGEKSKFGLSASQVLSVIERLKREGSLDAMQLVHFHLGSQMANIRDV 266

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232
                       E       IE+  +GGG+               +     +Y+  I   
Sbjct: 267 RNGVNESARFYCELRALGANIEYFDVGGGLAVDYDG-TRSQSSNSMNYGLAEYARNIVNT 325

Query: 233 PGEAIVTN 240
            G+     
Sbjct: 326 VGDVCQQY 333


>gi|223936213|ref|ZP_03628126.1| alanine racemase domain protein [bacterium Ellin514]
 gi|223895075|gb|EEF61523.1| alanine racemase domain protein [bacterium Ellin514]
          Length = 368

 Score = 47.1 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 35/133 (26%), Gaps = 9/133 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSS 58
           + TP  L+D   L  N+D        + +G++     K      +     Q    G T +
Sbjct: 17  VDTPSLLLDADALQANIDRMAAFFVNRPSGLRPHF--KSHKCTKIVRLQMQAGAVGITCA 74

Query: 59  SLYEVM-LGHEKFGGETHAY---NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114
            L E   L          A            I         +  ++          A   
Sbjct: 75  KLGEAEVLADAGIREILIANQIVGHVKIARLIQLAKRAAPIVAVDSEENARMLSAAASAA 134

Query: 115 HKKIGLRINPSVS 127
           + +I   +   + 
Sbjct: 135 NVEIRALVEVDIG 147


>gi|3421157|gb|AAC68518.1| arginine decarboxylase [Capsella bursa-pastoris]
          Length = 407

 Score = 47.1 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/245 (11%), Positives = 74/245 (30%), Gaps = 28/245 (11%)

Query: 30  VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82
            + +  +K      + + + ++      G  + S  E++L          +       +K
Sbjct: 1   YQGVYPVKGNQDRFVVEDIVKFGSSFRFGLEAGSKPEILLAMSCLCKGNPDAFLVCNGFK 60

Query: 83  DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134
           D E  ++            I+     +L+   + +QK++ +   GLR      +S    +
Sbjct: 61  DAEYISLALLGRKLALNTVIVLEQEEELDLVIELSQKMNVRPVIGLRAKLRTKHSGHFGS 120

Query: 135 DPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKS---FLCFSAMLKNIE 183
                  + G      +              +  L FH   +  S        A    + 
Sbjct: 121 TSGEKG-KFGLTTTQIVRVVRKLSQSGMLDRLQLLHFHIGSQIPSTSLLSDGVAEAAQLY 179

Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243
            E       ++ I +GGG+          +    +    E+Y+ +  +     +   ++ 
Sbjct: 180 CELVRLGAHMKVIDIGGGLGIDYDGSKSGESDLSVAYSLEEYA-EAVVASVRFVCDRSSV 238

Query: 244 LNTTV 248
            +  +
Sbjct: 239 KHPVI 243


>gi|218886631|ref|YP_002435952.1| arginine decarboxylase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218757585|gb|ACL08484.1| arginine decarboxylase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 645

 Score = 47.1 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 38/315 (12%), Positives = 79/315 (25%), Gaps = 53/315 (16%)

Query: 11  KQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD----GTTSS 58
           +  L + + +     + A          + +  +K      + + + Q+      G    
Sbjct: 79  ENILDSQITSLHQSFRKAIGSLGYKGEYRGIFPIKVNQQQQVVEKIAQFGSRYHHGLEVG 138

Query: 59  SLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
           S  E++    +    E       YKD E   +  +   + +     L    +    L + 
Sbjct: 139 SKAELIAAVSQLRDHEACLVCNGYKDEEFIDLGLHAVRMGYKCFFVLEMASELPLILERS 198

Query: 118 IGLRINPSVSYS-------KFILADPNRPFSRLGEKCKDKI--------ESEIKNVNGLM 162
             L + P +               D     S  G      +           +     L 
Sbjct: 199 KCLGVRPLIGVRAKLSVKAGGHWTDSGGERSTFGLTTAQIVDVVDQLKDHDMLDCFQLLH 258

Query: 163 FHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------------ 207
           +H   +    +           I          + ++ LGGG+                 
Sbjct: 259 YHLGSQVPNIRDIRAAVMEACRIYGGLVAEGAAMGYLDLGGGLAVDYDGSHTNYVSSRNY 318

Query: 208 --DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLD-----ISENIKN 257
             D    D  + +    ++       I  E G A V   + L   +LD     I      
Sbjct: 319 SLDEYCADIIEAVMNILDEEGIAHPHIVTESGRATVAYYSMLLFNILDVSRVEIGNLPDI 378

Query: 258 LVIVDSSVEAHVPDY 272
           L         ++ + 
Sbjct: 379 LPDDCPEPVRNMREA 393


>gi|3421161|gb|AAC68519.1| arginine decarboxylase [Arabidopsis arenosa]
          Length = 407

 Score = 47.1 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/245 (11%), Positives = 74/245 (30%), Gaps = 28/245 (11%)

Query: 30  VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82
            + +  +K      + + + ++      G  + S  E++L          +       +K
Sbjct: 1   YQGVYPVKGNQDRFVVEDIVKFGSSFRFGLEAGSKPEILLAMSCLCKGSPDAFLVCNGFK 60

Query: 83  DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134
           D E  ++            I+     +L+   + +QK++ +   GLR      +S    +
Sbjct: 61  DAEYISLALLGRKLALNTVIVLEQEEELDLVIELSQKMNVRPVIGLRAKLRTKHSGHFGS 120

Query: 135 DPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKS---FLCFSAMLKNIE 183
                  + G      +              +  L FH   +  S        A    + 
Sbjct: 121 TSGEKG-KFGLTTTQIVRVVRKLSQSGMLDCLQLLHFHIGSQIPSTSLLSDGVAEAAQLY 179

Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243
            E       ++ I +GGG+          +    +    E+Y+ +  +     +   ++ 
Sbjct: 180 CELVRLGAHMKVIDIGGGLGIDYDGSKSGESDLSVAYSLEEYA-EAVVASVRFVCDRSSV 238

Query: 244 LNTTV 248
            +  +
Sbjct: 239 KHPVI 243


>gi|171317786|ref|ZP_02906967.1| alanine racemase domain protein [Burkholderia ambifaria MEX-5]
 gi|171097070|gb|EDT41925.1| alanine racemase domain protein [Burkholderia ambifaria MEX-5]
          Length = 376

 Score = 47.1 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 41/322 (12%), Positives = 79/322 (24%), Gaps = 31/322 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  LID  ++ NN+          GVK    +K      + D  +     G T S+L
Sbjct: 6   VNTPAALIDVDRMRNNIARMQAHLDALGVKFRPHVKTTKCQHVVDAQIAAGAQGITVSTL 65

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDA-----VLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E        G     Y V     ++              II +++   +     A    
Sbjct: 66  KEAEQFFAA-GVRDIVYAVGMIPAKLGQALALRRQGCDLKIIADSLETAHAI--AAFGRE 122

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE------- 168
                 +   V           RP   L       +      + G++ H           
Sbjct: 123 HGERFDVWIEVDVDGHR--SGIRPDDGLLIDVGRALVDGGMALGGVLAHAGSSYEYDTHN 180

Query: 169 --NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226
                     +   +  +           +S+G           +    +        + 
Sbjct: 181 ALIAIAEQERSRTVHAAERLRAAGLPCPVVSIG-STPTALSAANLDGVTEVRAGVYVLFD 239

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286
           + ++     A+     ++ TTV+   +               + D      S        
Sbjct: 240 LVMHNIGVCALADIALSVLTTVIGHQQEKGWA----------IVDAGWMAMSRDRGTQRQ 289

Query: 287 PYTAMVCGRSCLAGDIFGEFHF 308
                        GD+ GE+  
Sbjct: 290 ARDFGYGQVCTEDGDVLGEYVM 311


>gi|3421164|gb|AAC68520.1| arginine decarboxylase [Sisymbrium altissimum]
 gi|3421166|gb|AAC68521.1| arginine decarboxylase [Stanleya pinnata]
          Length = 407

 Score = 47.1 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/277 (12%), Positives = 78/277 (28%), Gaps = 29/277 (10%)

Query: 30  VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82
            + +  +K      + + + ++      G  + S  E++L          +       +K
Sbjct: 1   YQGVYPVKGNQDRFVVEDIVRFGSPFRFGLEAGSKPEILLAMSCLCKGNPDAFLVCNGFK 60

Query: 83  DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134
           D E  ++            I+     +L+   D +QK++ +   GLR      +S    +
Sbjct: 61  DAEYISLALLGRKLALNTVIVLEQEEELDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGS 120

Query: 135 DPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKS---FLCFSAMLKNIE 183
                  + G      +              +  L FH   +  S        A    + 
Sbjct: 121 TSGEKG-KFGLTTTQIVRVMRKLSQSGMLDCLQLLHFHIGSQIPSTSLLSDGVAEAAQLY 179

Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243
            E       ++ I +GGG+          +    +    E+Y+  +        V +  +
Sbjct: 180 CELVRLGAHMKVIDIGGGLGIDYDGSKSGESDLSVAYTLEEYAEAVVASVR--FVCDRRS 237

Query: 244 LNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280
           +   V+        +      +   V         A 
Sbjct: 238 VKHPVICSESGRAIVSHHSVLIFEAVSAVKPMAHQAN 274


>gi|212723010|ref|NP_001132198.1| hypothetical protein LOC100193626 [Zea mays]
 gi|194693732|gb|ACF80950.1| unknown [Zea mays]
          Length = 639

 Score = 47.1 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/239 (10%), Positives = 64/239 (26%), Gaps = 23/239 (9%)

Query: 12  QKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSS 59
             L N ++T      +        +  + +  +K      +   + ++      G  + S
Sbjct: 73  DVLKNRIETLHNAFNSAMESTGYTSRYQGVFPIKVNQNKYVVQDMVRFGQQWNYGLEAGS 132

Query: 60  LYEVMLGHEKFG-----GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114
             E+++            + +     YKD +  A+  +   +  N +  L   ++ A  L
Sbjct: 133 KPELLIAMSCLPVTEAEPKPYLICNGYKDADYIALALSARAMGLNPIIVLEMEEELAIVL 192

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174
            +   L+                + F  +       +     +       +         
Sbjct: 193 DQYRKLQQKLPDD------DAVRKKFEPIIGIRAKLLTKLPGHFGSTAGKHGKFGMLADQ 246

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
              + + + KE      Q+    +G  I  T K Y        +           +L  
Sbjct: 247 IYEVAETLGKEGKLHWLQLLHFHIGSMIPTTGKVYDAVSEAAGIYCNLVNEHGAKWLAT 305


>gi|299472468|emb|CBN77253.1| Ornithine decarboxylase [Ectocarpus siliculosus]
          Length = 320

 Score = 46.7 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 19/78 (24%), Gaps = 3/78 (3%)

Query: 263 SSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIG-DRISF 320
                H         +             V G +C   D           ++ G D + F
Sbjct: 216 HCQTDH-GPSTSDALAHCRTACRNELPCTVWGPTCDGLDCVCRMTQLPDDMEPGRDWLFF 274

Query: 321 EDVAGYNINRKNWFNGIN 338
            DV          FNG+ 
Sbjct: 275 PDVGIRGGADVTGFNGLK 292


>gi|269965523|ref|ZP_06179641.1| biosynthetic arginine decarboxylase [Vibrio alginolyticus 40B]
 gi|269829886|gb|EEZ84117.1| biosynthetic arginine decarboxylase [Vibrio alginolyticus 40B]
          Length = 640

 Score = 46.7 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/248 (11%), Positives = 66/248 (26%), Gaps = 27/248 (10%)

Query: 19  DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-------GTTSSSLYEVM--LGHEK 69
                 +      L+  +K      + D +            G  + S  E++  L   +
Sbjct: 87  QAIEEYQYPNKYLLVYPIKVNQQREVVDEILASQAQLETKQLGLEAGSKPELLAVLALAQ 146

Query: 70  FGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
            G      N       +        L +   I+   +S+L+   ++A+ L  K  L +  
Sbjct: 147 QGSSVIVCNGYKDREYVRLALIGEKLGHKVFIVLEKLSELDLVLEEAKSLGVKPRLGLRI 206

Query: 125 SVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NVNGLMFHNNCE---NKSF 172
            ++         +     + G      +    +         +  + FH   +    +  
Sbjct: 207 RLASQGAGKWQASGGEKSKFGLSASQVLSVIERLKREGNLDAMQLVHFHLGSQMANIRDV 266

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232
                       E       IE+  +GGG+               +     +Y+  I   
Sbjct: 267 RNGVNESARFYCELRALGANIEYFDVGGGLAVDYDG-TRSQSSNSMNYGLAEYARNIVNT 325

Query: 233 PGEAIVTN 240
            G+  +  
Sbjct: 326 VGDVCLQY 333


>gi|254488689|ref|ZP_05101894.1| metal-activated pyridoxal enzyme [Roseobacter sp. GAI101]
 gi|214045558|gb|EEB86196.1| metal-activated pyridoxal enzyme [Roseobacter sp. GAI101]
          Length = 351

 Score = 46.7 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 40/330 (12%), Positives = 80/330 (24%), Gaps = 26/330 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTS--S 58
           + TP  LID      N+D          + L   +K      +     Q    G T    
Sbjct: 6   LDTPAVLIDLDIAEANIDRFQAHCDAHDLNLRPHIKTHKLPMLAKRQVQAGAIGITCQKV 65

Query: 59  SLYEVMLGHEKFGGETHAYN---VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           S  E M+           +N                   +++ +  + ++          
Sbjct: 66  SEAEAMISEGGIDDVLITFNILGTGKLSRLRAIADKVRLSVVADNTTTIDGLAGAFSDAD 125

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE--SEIKNVNGLMFHNNCENKSFL 173
             + + +               R      +   +     +    +           +   
Sbjct: 126 APLSVLVECDTGA--------ARCGVATPQAAGELATYIAGQPGLTFGGLMTYPPAEQER 177

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
              + L   +         +  IS GG                              L+ 
Sbjct: 178 FVQSWLTEAKDLIEASGLDVPVISNGGSPGM---WQAQDVPVATEYRIGTYVFNDRSLQD 234

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVC 293
                 +   LN  V  +S   +N  ++D+  +    D L       +    G     V 
Sbjct: 235 RGVCTWDDCALNVLVTVVSVPARNRAVIDAGTKVLTSDLLGLDGHGHVL---GRPDIEVA 291

Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRI-SFED 322
           G S   G +  +      +K+GDR+    +
Sbjct: 292 GLSEEHGVLMADSI---NLKVGDRLRIIPN 318


>gi|91228096|ref|ZP_01262138.1| arginine decarboxylase [Vibrio alginolyticus 12G01]
 gi|91188214|gb|EAS74514.1| arginine decarboxylase [Vibrio alginolyticus 12G01]
          Length = 640

 Score = 46.7 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/248 (11%), Positives = 66/248 (26%), Gaps = 27/248 (10%)

Query: 19  DTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-------GTTSSSLYEVM--LGHEK 69
                 +      L+  +K      + D +            G  + S  E++  L   +
Sbjct: 87  QAIEEYQYPNKYLLVYPIKVNQQREVVDEILASQAQLETKQLGLEAGSKPELLAVLALAQ 146

Query: 70  FGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
            G      N       +        L +   I+   +S+L+   ++A+ L  K  L +  
Sbjct: 147 QGSSVIVCNGYKDREYVRLALIGEKLGHKVFIVLEKLSELDLVLEEAKSLGVKPRLGLRI 206

Query: 125 SVSYSKFILADPNRPFS-RLGEKCKDKIESEIK--------NVNGLMFHNNCE---NKSF 172
            ++         +     + G      +    +         +  + FH   +    +  
Sbjct: 207 RLASQGAGKWQASGGEKSKFGLSASQVLSVIERLKREGNLDAMQLVHFHLGSQMANIRDV 266

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232
                       E       IE+  +GGG+               +     +Y+  I   
Sbjct: 267 RNGVNESARFYCELRALGANIEYFDVGGGLAVDYDG-TRSQSSNSMNYGLAEYARNIVNT 325

Query: 233 PGEAIVTN 240
            G+  +  
Sbjct: 326 VGDVCLQY 333


>gi|167646643|ref|YP_001684306.1| alanine racemase domain-containing protein [Caulobacter sp. K31]
 gi|167349073|gb|ABZ71808.1| alanine racemase domain protein [Caulobacter sp. K31]
          Length = 383

 Score = 46.7 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 24/70 (34%), Gaps = 1/70 (1%)

Query: 2  IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
          + TP  +ID+  L  N+        + GVKL    K   +  +    +     G   + +
Sbjct: 20 LNTPVLVIDRPALERNIARMARFAADKGVKLRPHAKTHKSVDIAKLQVAAGAVGLCCAKI 79

Query: 61 YEVMLGHEKF 70
           E     E  
Sbjct: 80 GEAEALAEGG 89


>gi|218198899|gb|EEC81326.1| hypothetical protein OsI_24498 [Oryza sativa Indica Group]
          Length = 424

 Score = 46.7 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 4/48 (8%), Positives = 13/48 (27%), Gaps = 5/48 (10%)

Query: 5  PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM 52
          P +  D   +   +    +        +  A K  +   +   + +  
Sbjct: 27 PVWAYDADIISQRIAQLRHFD-----TIRFAQKACSNIHILRLMREQG 69


>gi|262274662|ref|ZP_06052473.1| biosynthetic arginine decarboxylase [Grimontia hollisae CIP 101886]
 gi|262221225|gb|EEY72539.1| biosynthetic arginine decarboxylase [Grimontia hollisae CIP 101886]
          Length = 639

 Score = 46.7 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 40/299 (13%), Positives = 80/299 (26%), Gaps = 53/299 (17%)

Query: 5   PYYLIDKQKLLNN----LDTALYIRKNAGVK----LLLALKCFAAWGMF-DTLNQYMD-- 53
           P  +   + L +                G +    L+  +K      +  + L       
Sbjct: 61  PVLVRFPEILHHRVDSLCAHFNDAIAEYGYEGEYLLVYPIKVNQQKEVVGEILKSQYASQ 120

Query: 54  ----GTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKF 107
               G  + S  E+M  L   +        N  YKD E   +    + +       L K 
Sbjct: 121 KRQLGLEAGSKPELMAVLAMAQQASSVIVCN-GYKDREYIRLALIGEKLGHEVYIVLEKL 179

Query: 108 KDKAQKLHKKIGLRINPS-------VSYSKFILADPNRPFSRLGEKCKDKIE-------- 152
            +    L +   L + P         S  K          S+ G      +         
Sbjct: 180 SELDTVLTEAKALGVKPRLGLRARLASQGKGKWQASGGEKSKFGLSASQVMTVMNRLREL 239

Query: 153 SEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-- 207
             +  +  L FH   +  +     + +    + F         I  + +GGG+    +  
Sbjct: 240 DMLDTLQLLHFHLGSQIANIRDVRSGVNEAARVFAELYQMGAGITTLDVGGGLAVDYEGT 299

Query: 208 --------DYPVKDFCQRLKEFSEK-------YSVQIYLEPGEAIVTNTTTLNTTVLDI 251
                   +Y  +++   +                +I  E G  +  +   L T V+ +
Sbjct: 300 RSQSSCSMNYSQREYANNVVFTIGDVCKAFNIKMPRIISESGRNLTAHHAVLITDVMGV 358


>gi|242046596|ref|XP_002400274.1| ornithine decarboxylase, putative [Ixodes scapularis]
 gi|215497604|gb|EEC07098.1| ornithine decarboxylase, putative [Ixodes scapularis]
          Length = 159

 Score = 46.7 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 34/92 (36%), Gaps = 2/92 (2%)

Query: 249 LDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHF 308
           +D+  N  N   V +++   + D  LY      +         + G +C   D   E   
Sbjct: 16  VDVFINESNNNCVCANLYQFL-DIQLYPLKPP-FDRPRNVLTSLWGATCNPIDRMEERTL 73

Query: 309 EKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
              V + + +  +++  Y++     FNG   P
Sbjct: 74  MFDVSVDEWLFMDNMGAYSLIGVTGFNGFGFP 105


>gi|237752646|ref|ZP_04583126.1| arginine decarboxylase [Helicobacter winghamensis ATCC BAA-430]
 gi|229376135|gb|EEO26226.1| arginine decarboxylase [Helicobacter winghamensis ATCC BAA-430]
          Length = 618

 Score = 46.7 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 38/300 (12%), Positives = 90/300 (30%), Gaps = 49/300 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTLNQYM--- 52
           P  +     +   ++      + +          K +  +K       +   + Q +   
Sbjct: 46  PLLVRFPHLMKKQVEKIFTNFEASIKEHHYKGRFKAVFPIKVNHYPNFILPLMEQNIKRC 105

Query: 53  DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNK 106
            G  + S  E+++               +KD E+       A + +  T+    +++L  
Sbjct: 106 YGLEAGSKSELIIAMAYTNDNAPITVNGFKDKEMISLGFIAAKMGHDITLTIEGLNELET 165

Query: 107 FKDKAQ---KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--------EI 155
             + A+   K +  IGLRI    S    I A      S+ G    + +E+         +
Sbjct: 166 IIEVAKTLGKPYPNIGLRIRL-HSTGVGIWAKSGGINSKFGLTATELVEAISLLQKNKLL 224

Query: 156 KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDYPV 211
                + FH   +          L+     +          +  +++GGG+      +  
Sbjct: 225 DKFTMIHFHIGSQISDIAPLKKALREAGNIYAELRKMGAKNLNNVNIGGGLAVEYAQHEN 284

Query: 212 KDFCQR---------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                                + +  ++    I++E G  +  +   L + VL++     
Sbjct: 285 TQNRNYTLAEFSGNVVFTLKEIAKNKKEPEPDIFIESGRYVSASHAVLISPVLELFSQEY 344


>gi|3421144|gb|AAC68514.1| arginine decarboxylase [Boechera stricta]
          Length = 407

 Score = 46.7 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/204 (13%), Positives = 61/204 (29%), Gaps = 27/204 (13%)

Query: 30  VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82
            + +  +K      + + + ++      G  + S  E++L          +       +K
Sbjct: 1   YQGVYPVKGNQDRFVVEDIVKFGSSFRFGLEAGSKPEILLAMSCLCKGSPDAFLVCNGFK 60

Query: 83  DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134
           D E  ++            I+     +L+   + +QK++ +   GLR      +S    +
Sbjct: 61  DAEYISLALLGRKLALNTVIVLEQEEELDLVIELSQKMNVRPVIGLRAKLRTKHSGHFGS 120

Query: 135 DPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKS---FLCFSAMLKNIE 183
                  + G      +              +  L FH   +  S        A    + 
Sbjct: 121 TSGEKG-KFGLTTTQIVRVVRKLSQSGMLDCLQLLHFHIGSQIPSTSLLSDGVAEAAQLY 179

Query: 184 KEFGHFITQIEWISLGGGIHFTDK 207
            E       ++ I +GGG+     
Sbjct: 180 CELVRLGAHMKVIDIGGGLGIDYD 203


>gi|254513257|ref|ZP_05125322.1| metal-activated pyridoxal enzyme [Rhodobacteraceae bacterium KLH11]
 gi|221532261|gb|EEE35257.1| metal-activated pyridoxal enzyme [Rhodobacteraceae bacterium KLH11]
          Length = 351

 Score = 46.7 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 51/211 (24%), Gaps = 16/211 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTS--S 58
           I TP  L+D      N+D          + +   +K      +     +    G T    
Sbjct: 6   IDTPAVLVDLDIAEANIDRFQGHCAKHELAVRPHIKTHKLPKLARRQLEAGAIGITCQKV 65

Query: 59  SLYEVMLGHEKFGGETHAYN---VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           S  E M+           +N    A              +++ +    ++          
Sbjct: 66  SEAEAMIAEGGIDDVLITFNILGDAKLARLRALSEKVRLSVVADNTETVDGLSKSFSDAA 125

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE--SEIKNVNGLMFHNNCENKSFL 173
             +G+ +               R      E+ +D          V  L           +
Sbjct: 126 TPLGVLVECDTGA--------ARCGVTTPEQARDLARYIDSQPGVTFLGLMTYPPVGQEV 177

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHF 204
                L   ++E       +  +S GG    
Sbjct: 178 AVQEWLTRAKREVEEAGLPVHVVSHGGSPGM 208


>gi|319647068|ref|ZP_08001294.1| hypothetical protein HMPREF1012_02332 [Bacillus sp. BT1B_CT2]
 gi|317390892|gb|EFV71693.1| hypothetical protein HMPREF1012_02332 [Bacillus sp. BT1B_CT2]
          Length = 383

 Score = 46.7 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/327 (9%), Positives = 84/327 (25%), Gaps = 17/327 (5%)

Query: 4   TP-YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA-AWGMFDTLNQYMDG-TTSSSL 60
           +P  Y++D   +  N        +   ++L    K F     +   + +   G   +   
Sbjct: 27  SPNTYVLDLDTVKKNAKVLSEKARKQDIELFFMTKQFGRNPLVAQAIAESGIGKAVAVDP 86

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           +E +   +      H  ++      +    +  + D +   ++         A+K+ +K 
Sbjct: 87  WEAITLSQNGIKIGHVGHLVQIPIHMIPAILELHPDYVTVFSLENAQNINRVAKKMGRKQ 146

Query: 119 GLRINPSVSYSKFILADPNRPFS----RLGEKCKDKIESEIKNVN-GLMFHNNCENKSFL 173
            + +  +                    +  E  +     EI  +             +  
Sbjct: 147 KVFLRIANKEDYIYKGQEGGFTFEQIVKDIESIEQLEGLEIAGLTSFPCILIQDGLPAVT 206

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
              A ++ ++        +   +++             ++   + +              
Sbjct: 207 PNVASMQTVKSFLMERGYKKLEMNMPSATSCATMKLLKENGATQGEPGHALIGTTPIHAT 266

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVC 293
            +          T V  IS +   +        +H+   L+                   
Sbjct: 267 KQLAERPAMVYVTEVSHISNHHAYVFGGGFYPRSHMKAALVG------TNKDHLKKVQAI 320

Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISF 320
             +    D +G  +     K+GD   F
Sbjct: 321 EMTPDHIDYYGSLNTV-EAKVGDTAIF 346


>gi|52079158|ref|YP_077949.1| putative alanine racemase [Bacillus licheniformis ATCC 14580]
 gi|52784525|ref|YP_090354.1| hypothetical protein BLi00725 [Bacillus licheniformis ATCC 14580]
 gi|52002369|gb|AAU22311.1| putative alanine racemase [Bacillus licheniformis ATCC 14580]
 gi|52347027|gb|AAU39661.1| conserved hypothetical protein [Bacillus licheniformis ATCC 14580]
          Length = 383

 Score = 46.7 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/327 (9%), Positives = 84/327 (25%), Gaps = 17/327 (5%)

Query: 4   TP-YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA-AWGMFDTLNQYMDG-TTSSSL 60
           +P  Y++D   +  N        +   ++L    K F     +   + +   G   +   
Sbjct: 27  SPNTYVLDLDTVKKNAKVLSEKARKQDIELFFMTKQFGRNPLVAQAIAESGIGKAVAVDP 86

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEID--AVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           +E +   +      H  ++      +    +  + D +   ++         A+K+ +K 
Sbjct: 87  WEAITLSQNGIKIGHVGHLVQIPIHMIPAILELHPDYVTVFSLENAQNINRVAKKMGRKQ 146

Query: 119 GLRINPSVSYSKFILADPNRPFS----RLGEKCKDKIESEIKNVN-GLMFHNNCENKSFL 173
            + +  +                    +  E  +     EI  +             +  
Sbjct: 147 KVFLRIANKEDYIYKGQEGGFTFEQIVKDIESIEQLEGLEIAGLTSFPCILIQDGLPAVT 206

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
              A ++ ++        +   +++             ++   + +              
Sbjct: 207 PNVASMQTVKSFLMERGYKKLEMNMPSATSCATMKLLKENGATQGEPGHALIGTTPIHAT 266

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVC 293
            +          T V  IS +   +        +H+   L+                   
Sbjct: 267 KQLAERPAMVYVTEVSHISNHHAYVFGGGFYPRSHMKAALVG------TNKDHLKKVQAI 320

Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRISF 320
             +    D +G  +     K+GD   F
Sbjct: 321 EMTPDHIDYYGSLNTV-EAKVGDTAIF 346


>gi|301061165|ref|ZP_07201954.1| conserved hypothetical protein [delta proteobacterium NaphS2]
 gi|300444707|gb|EFK08683.1| conserved hypothetical protein [delta proteobacterium NaphS2]
          Length = 365

 Score = 46.7 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 45/337 (13%), Positives = 84/337 (24%), Gaps = 38/337 (11%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
           TP+Y+ +++ L         +   +G  L           +             +SL E 
Sbjct: 24  TPFYVYNEETLNEIFFDLSAMDALSG--LFYPYHLNFHQAVLQKAFDLDAYFRCNSLLEA 81

Query: 64  MLGHEKF---GGETHAY---NVAYKDCEIDAVLSNCDTIIFN---TVSQLNKFKDKAQKL 114
               + F         +   +   ++CE  A       +  +     + L  F+DK+  L
Sbjct: 82  DHLRDHFPKLPPSRIFFLSDHKHKRECEDAAHQGLHVAVRADKNTMNACLEAFQDKSIFL 141

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD-----KIESEIKNVNGLMFHNNCEN 169
              +G  I  S    K        P SR    C         ++     +GL        
Sbjct: 142 CLDMGDEIPQSGIPKKTTHGIYVCPDSRFLSLCSQDEKISLFKTLAHQFSGLSTLVLGNA 201

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
            +    S M      E   ++  I+       +      + V      L +     + + 
Sbjct: 202 ANNESISPMDGMELSEIETYLEAIQEACPQFELRLELPMHLVSYAGALLVKALASGTAEG 261

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT 289
                  +  N   L   +      I NL   +            Y+ +           
Sbjct: 262 MPYIQTDLPMN-DALYHEIHGTPHQIVNLSRPEEERIILTRMIQQYKHAENGIVYLNTPC 320

Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
                                 V+ GD I    +  Y
Sbjct: 321 F---------------------VEQGDIILLTHMGAY 336


>gi|254513241|ref|ZP_05125306.1| threonine aldolase family protein [Rhodobacteraceae bacterium
           KLH11]
 gi|221532245|gb|EEE35241.1| threonine aldolase family protein [Rhodobacteraceae bacterium
           KLH11]
          Length = 382

 Score = 46.3 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/193 (10%), Positives = 52/193 (26%), Gaps = 14/193 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  L+D      N++ A  +  + G      LK      + +        G   +S+
Sbjct: 27  LDTPCLLVDLPVFKQNIERAAQMVADTGKAFTPHLKAHKTPDIAEMQCAASAAGFCVASI 86

Query: 61  YEVML-GHEKFGGETH----AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E  +         T                 +   +  T++ +T   +    +    + 
Sbjct: 87  GEAEVFAKYGDTPLTITSATVTGRQMARIAALSKQVSELTVVVDTPPNIRALANLDATVS 146

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175
             I + +    S             ++     ++ + +   N+ GL  +    +      
Sbjct: 147 VLIDIDMGRGRSACT--------EEAQAVHLAREIMGAPNLNLAGLQCYAGQLSHMNDFH 198

Query: 176 SAMLKNIEKEFGH 188
               +    +   
Sbjct: 199 DREEQAAASDRRA 211


>gi|159031803|dbj|BAF91873.1| arginine decarboxylase [Nicotiana benthamiana]
          Length = 199

 Score = 46.3 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 59/200 (29%), Gaps = 27/200 (13%)

Query: 30  VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82
            + +  +KC     + + + ++      G  + S  E++L          E       +K
Sbjct: 1   YQGVYPVKCNQDRFVVEDIVKFGSSFRFGLEAGSKPELLLAMSCLCKGSAEGLLICNGFK 60

Query: 83  DCEID------AVLSNCDTIIFNTVSQLNKFKDKAQKL--HKKIGLRINPSVSYSKFILA 134
           D E          L     I+     +L+   D ++ +     IGLR      +S    +
Sbjct: 61  DAEYISLALVARKLMLNTVIVLEQEEELDLVIDLSRNMAVRPVIGLRAKLRTKHSGHFGS 120

Query: 135 DPNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKSFL---CFSAMLKNIE 183
                  + G      +              +  L FH   +  S             I 
Sbjct: 121 TSGEKG-KFGLTTTQIVRVVKKLEESGMLDCLQLLHFHIGSQIPSTELLADGVGEAAQIY 179

Query: 184 KEFGHFITQIEWISLGGGIH 203
            E       +++I +GGG+ 
Sbjct: 180 CELIRLGAGMKFIDIGGGLG 199


>gi|3421138|gb|AAC68512.1| arginine decarboxylase [Carica papaya]
          Length = 408

 Score = 46.3 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/203 (11%), Positives = 59/203 (29%), Gaps = 25/203 (12%)

Query: 30  VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82
            + +  +K      + + + ++      G  + S  E++L          +       +K
Sbjct: 1   YQGVYPVKSNQDRFVVEDIVKFGSSFRFGLEAGSKPELLLAMSCLCKGSPDAFLVCNGFK 60

Query: 83  DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY-SKFILAD 135
           D E  ++            I+     +++   D +QKL  K  + +   +          
Sbjct: 61  DAEYISLALFARKLALNTVIVLEQEEEIDLVIDLSQKLSVKPVIGVRAKLRTKHSGHFGS 120

Query: 136 PNRPFSRLGEKCKDKIES--------EIKNVNGLMFHNNCENKS---FLCFSAMLKNIEK 184
            +    + G      +           +  +  L FH   +  S             I  
Sbjct: 121 TSGEKGKFGLTTTQILRVVGKLKQAGMLDCLQLLHFHIGSQIPSTALLSDGVGEAAQIYC 180

Query: 185 EFGHFITQIEWISLGGGIHFTDK 207
           E      +++ + +GGG+     
Sbjct: 181 ELTRLGARMQVVDIGGGLGIDYD 203


>gi|89075860|ref|ZP_01162239.1| biosynthetic arginine decarboxylase [Photobacterium sp. SKA34]
 gi|89048389|gb|EAR53966.1| biosynthetic arginine decarboxylase [Photobacterium sp. SKA34]
          Length = 639

 Score = 46.3 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 38/303 (12%), Positives = 80/303 (26%), Gaps = 51/303 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL-------N 49
           P  +   + + + +D+   +                +  +K      +   +        
Sbjct: 61  PVLVRFPEVMHHRVDSLCSVFNQTIENYGYTGDYLAVYPIKVNQQQEVVSEILKSQYAKQ 120

Query: 50  QYMDGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
           Q   G  + S  E+M  L   +        N       I        L +   I+   +S
Sbjct: 121 QRQLGLEAGSKPELMAVLAMAQEASSVIVCNGYKDKEYIRLALIGEKLGHEVYIVLEKLS 180

Query: 103 QLNKFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKI--------ES 153
           +L    ++A++L     L +     S  K          S+ G      +          
Sbjct: 181 ELRIILEQAKELGVTPRLGLRARLASQGKGKWQASGGEKSKFGLSASQVLTVVDELRQRD 240

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
            +  +  L FH   +    +           +  E       I  + +GGG+    +   
Sbjct: 241 MLDCLQLLHFHLGSQIASIRDVRNGVGEAGRVYAELKKIGVGITTVDVGGGLAVDYEGTR 300

Query: 211 VKDFCQR-----------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE 253
            ++ C                   +    +    +I  E G  +  +   L T V+ I  
Sbjct: 301 CQNSCSMNYSINEYANNIVYVLGDICTEYDISMPRIISESGRNLTAHHAVLITDVVGIES 360

Query: 254 NIK 256
              
Sbjct: 361 YKP 363


>gi|284041650|ref|YP_003391990.1| alanine racemase domain protein [Conexibacter woesei DSM 14684]
 gi|283945871|gb|ADB48615.1| alanine racemase domain protein [Conexibacter woesei DSM 14684]
          Length = 372

 Score = 46.3 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 30/79 (37%), Gaps = 2/79 (2%)

Query: 2  IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
          + TP  ++D+  L  N++    + ++AGV L    K      +    L+    G T + L
Sbjct: 6  VDTPALVVDRDVLRANVEAMAALARDAGVALRPHAKTHKLPQVARMQLDAGAAGLTVAKL 65

Query: 61 YEVML-GHEKFGGETHAYN 78
           E  +           AY 
Sbjct: 66 GEAEVFADAGVTDLLIAYP 84


>gi|227819408|ref|YP_002823379.1| metal-activated pyridoxal enzyme [Sinorhizobium fredii NGR234]
 gi|227338407|gb|ACP22626.1| metal-activated pyridoxal enzyme [Sinorhizobium fredii NGR234]
          Length = 352

 Score = 46.3 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 30/259 (11%), Positives = 72/259 (27%), Gaps = 16/259 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTS--S 58
           I+TP  L+D      N+          G+++   +K      M +   +    G T    
Sbjct: 5   IETPAVLVDLDIARRNVRAFQAYADRHGIRVRPHIKTHKLPQMAELQLEAGAVGITCQKV 64

Query: 59  SLYEVML-GHEKFGGETHAYN---VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114
           S  E M+ G  +       YN    A              +++ +  + ++   D     
Sbjct: 65  SEAEAMVDGSARIKDVLITYNILGEAKLARLARLNERLTLSVVADNAAVVDGLSDYFSGA 124

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174
            K + + +  +                      +  +E+    +            +   
Sbjct: 125 QKPLTVLVECNTGAD----RCGVATPDEAAALARRIVEAA--GLRFGGLMTYPPVGAAAR 178

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
             + +    +       Q+  ++ GG                  +  +  Y+ +  +  G
Sbjct: 179 VQSFMSEARRLIEADGLQVPTVTSGGTPSMMQAAEA--PVATEYRPGTYIYNDRSLVARG 236

Query: 235 EAIVTNTT-TLNTTVLDIS 252
            A   +   T+  TV+ + 
Sbjct: 237 VATWDDCALTVLATVVSVP 255


>gi|149178497|ref|ZP_01857086.1| alanine racemase-like protein [Planctomyces maris DSM 8797]
 gi|148842710|gb|EDL57084.1| alanine racemase-like protein [Planctomyces maris DSM 8797]
          Length = 366

 Score = 46.3 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 40/331 (12%), Positives = 83/331 (25%), Gaps = 29/331 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTS--S 58
           + TP   ID   +  N+        + G       KC     +    +     G T    
Sbjct: 13  LDTPILCIDLDIMEANIQKMSDYILSRGKTWRPHEKCHKTPAIALAQMGAGAIGVTCAKV 72

Query: 59  SLYEVMLGHEKFGGETHAYNVAYKDCEIDA---VLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           S  EVM           A  +  K                I  +  +Q+           
Sbjct: 73  SEAEVMAA-AGVKDILIANMIVGKTKWERVVSLCRHARPIIACDHYAQIEPLAKMCADAG 131

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175
               +    ++  ++   + P +    L          E+  + G   H           
Sbjct: 132 VVCRMMPEVNIGLNRV-GSRPGQDTLDLAMAIDKLEGVELAGIMGYEGHLLQIQDQAEKE 190

Query: 176 SAMLKN------IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
             +++        +          E +S GG           +   +             
Sbjct: 191 EKIIEAMRTLVGCKTTIEAKGIPCEIVSAGGT-GSYQITSNCEGITELQAGGGIFADPMY 249

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA--HVPDYLLYQESATIYPNTGP 287
             + G   +  + ++  TV+   E  + ++               +     A +   +  
Sbjct: 250 VNKCGLTGLDYSLSVLATVVSRPEKGRMVLDCGRKTMHPDFQLPLVKAWPDAEVTALSAE 309

Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRI 318
           + A+  G    + D          +KIGD+I
Sbjct: 310 HCAVTLGP--ESQD----------LKIGDKI 328


>gi|258545136|ref|ZP_05705370.1| arginine 2-monooxygenase [Cardiobacterium hominis ATCC 15826]
 gi|258519655|gb|EEV88514.1| arginine 2-monooxygenase [Cardiobacterium hominis ATCC 15826]
          Length = 637

 Score = 46.3 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/288 (11%), Positives = 76/288 (26%), Gaps = 48/288 (16%)

Query: 12  QKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM----DGTTSSS 59
             L N +         A          + +  +K      + + + ++      G  + S
Sbjct: 72  NLLENQIKLINESFSKAIADSNYRGKYRGVFPIKVNQQAQVIEDIVRFGKPWQHGLEAGS 131

Query: 60  LYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNC------DTIIFNTVSQLNKFKDKAQ 112
             E+M+                YKD E   +             +  T ++L    + +Q
Sbjct: 132 KAELMIALSMLSEPGPLIVCNGYKDREFVELGLGMTKLGFQVIFVIETPAELPIIVESSQ 191

Query: 113 KLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMF 163
            +  +  + +     S         +   S  G      +              +  L +
Sbjct: 192 AMGVRPVIGVRAKLFSRVSGRWNATSGDRSMFGLNASQLVGVIDGLKAAGMLDCLQFLHY 251

Query: 164 HNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------------- 207
           H   +    +              E       + ++ LGGG+                  
Sbjct: 252 HLGSQIPNIRDIRTGVREACRYYVELVEEGAPMRFLDLGGGLAVDYDGSRTSAIHSRNYA 311

Query: 208 -DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDI 251
            +    D  + ++   ++       I  E G + V  +T L   +LD+
Sbjct: 312 LEEYCVDVVETIQSVLDEKGIEHPTIVTESGRSTVAYSTVLMFNILDV 359


>gi|3421140|gb|AAC68513.1| arginine decarboxylase [Polanisia dodecandra]
          Length = 408

 Score = 46.3 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 59/203 (29%), Gaps = 25/203 (12%)

Query: 30  VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82
            + +  +K      + + + ++      G  + S  E++L          E       +K
Sbjct: 1   YQGVYPVKGNQDRFVVEDIVKFGSSFRFGLEAGSKPEILLAMSCLCKGNPEAFLVCNGFK 60

Query: 83  DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY-SKFILAD 135
           D E  ++            I+     +L+   D +QK++ +  + I   +          
Sbjct: 61  DAEYISLALLGRKLALNTVIVLEQEEELDLVIDLSQKMNVRPVIGIRAKLRTKHSGHFGS 120

Query: 136 PNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKS---FLCFSAMLKNIEK 184
            +    + G      +              +  L FH   +  S        A    +  
Sbjct: 121 TSGEKGKFGLNTIQIVRVVRKLCQVGMLDCLQLLHFHIGSQIPSTALLSDGVAEAAQLYC 180

Query: 185 EFGHFITQIEWISLGGGIHFTDK 207
           E      Q+  I +GGG+     
Sbjct: 181 ELVRLGAQMRVIDVGGGLGIDYD 203


>gi|149915930|ref|ZP_01904454.1| alanine racemase-like protein [Roseobacter sp. AzwK-3b]
 gi|149810253|gb|EDM70099.1| alanine racemase-like protein [Roseobacter sp. AzwK-3b]
          Length = 387

 Score = 46.3 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/214 (11%), Positives = 62/214 (28%), Gaps = 18/214 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTS-- 57
           I+TP  ++D   L  N+       K  G++  +  K   +  +     +     G     
Sbjct: 27  IQTPCLVLDLDALERNIRKMGDYAKAHGMRHRVHGKMHKSVDVAKLQVELGGACGVCCQK 86

Query: 58  SSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA------ 111
            S  EV     + G +    +   ++      L+    +   T+  ++   + A      
Sbjct: 87  VSEAEV---FARGGIKDVLVSNQVREPAKIDRLARMPKLGARTICCVDDIDNVADLSAAA 143

Query: 112 --QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN 169
                  +  + I+                 ++  +       + ++   G M H +   
Sbjct: 144 QKHGTQIECLVEIDCGAGRCGVTQTADVVRIAKAIDAAPGLKFAGLQAYQGAMQHMDSYE 203

Query: 170 ---KSFLCFSAMLKNIEKEFGHFITQIEWISLGG 200
                     AM+++          + + +  GG
Sbjct: 204 DRKTKVDIAIAMVRDAVDALKADGIECDIVGGGG 237


>gi|13124555|sp|O81160|SPE2_THECC RecName: Full=Arginine decarboxylase; Short=ADC; Short=ARGDC
 gi|3421134|gb|AAC68511.1| arginine decarboxylase [Theobroma cacao]
          Length = 406

 Score = 46.3 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/203 (11%), Positives = 57/203 (28%), Gaps = 25/203 (12%)

Query: 30  VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82
            + +  +K      + + + ++      G  + S  E++L          E       +K
Sbjct: 1   YQGVYPVKSNQDRFVVEDIVKFGSSFRFGLEAGSKPELLLAMSCLCKGNPEALLVCNGFK 60

Query: 83  DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSY-SKFILAD 135
           D E  ++            I+     +++   D +QKL  +  + +   +          
Sbjct: 61  DAEYISLALLARKLALKHVIVLEQEEEVDMVIDISQKLSVRPVIGVRAKLRTKHSGHFGS 120

Query: 136 PNRPFSRLGEKCKDKIESEI--------KNVNGLMFHNNCENKS---FLCFSAMLKNIEK 184
            +    + G      +              +  L FH   +  S             I  
Sbjct: 121 TSGEKGKFGLTTTQVLRVVKKLQDSGMLDCLQLLHFHIGSQIPSTALLSDGVGEAAQIYS 180

Query: 185 EFGHFITQIEWISLGGGIHFTDK 207
           E      +++ +  GGG+     
Sbjct: 181 ELVRLGARMKVVDFGGGLGIDYN 203


>gi|262201693|ref|YP_003272901.1| alanine racemase domain-containing protein [Gordonia bronchialis
           DSM 43247]
 gi|262085040|gb|ACY21008.1| alanine racemase domain protein [Gordonia bronchialis DSM 43247]
          Length = 360

 Score = 46.3 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/209 (11%), Positives = 51/209 (24%), Gaps = 11/209 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSLY 61
            TP+ ++D ++L  NL       ++AGV +    K      +    +     G T +++ 
Sbjct: 6   GTPFLVVDDERLEANLARVADRARDAGVLVRPHAKTHKCVEIARRQIAHGAAGLTVATVG 65

Query: 62  EVML------GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           E  +        E F         A     I         +  ++        D   +  
Sbjct: 66  EAEVFAAVDEVREIFIAYPLWVTPAMAGRLISIARIVSLRVGIDSAEGARHLADSLHEAG 125

Query: 116 KKIG-LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE---NKS 171
                L +   +   +       R    +     D     +                 ++
Sbjct: 126 DGGAPLEVVVEIDSGQHRTGTSPRVAGEVARAAVDAGLDVVGVFTFPGHSYGPGDTRARA 185

Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGG 200
                  L    +       +    S G 
Sbjct: 186 ADQEITALAEAAQGLRANGIEPRVRSGGS 214


>gi|145299665|ref|YP_001142506.1| arginine decarboxylase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|166200064|sp|A4SPD6|SPEA_AERS4 RecName: Full=Biosynthetic arginine decarboxylase; Short=ADC
 gi|142852437|gb|ABO90758.1| biosynthetic arginine decarboxylase [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 633

 Score = 46.3 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 35/266 (13%), Positives = 74/266 (27%), Gaps = 33/266 (12%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD-- 53
           TP  L     L + +D        A            +  +K      + +T++Q     
Sbjct: 60  TPVLLRFPDILKSRVDALFNAFGQAIEKSGYEGDYLCVYPIKVNQQSRVIETISQSYSDK 119

Query: 54  ---GTTSSSLYEVMLGHEKFG--GETHAYNVAYKDCEIDAV-----LSNCDTIIFNTVSQ 103
              G  + S  E++         G     N       I        + +   I+    S+
Sbjct: 120 PRLGLEAGSKPELLAVLSHHHEQGSVIVCNGYKDREYIRHALLGNLMGHKVYIVVEKPSE 179

Query: 104 LNKFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIE--------SE 154
           L    D++ +L+ K  + +     S    +        S+ G      +          +
Sbjct: 180 LEMVLDESARLNIKPNIGVRAKLASTGSGMWESSGGSMSKFGLSASQILALVERLRSLDK 239

Query: 155 IKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV 211
           +  +  L FH   +    +              E       I+ + +GGG+    +    
Sbjct: 240 LDCLQLLHFHLGSQIANIRDIQGGIRECGRFYSELRRLGVPIDVVDVGGGLGVDYEGTRS 299

Query: 212 KDFCQRLKEFSEKYSVQIYLEPGEAI 237
           +  C        +Y+  +    G+  
Sbjct: 300 QSHCSA-NYSLSEYANNVVWGIGDVC 324


>gi|254705776|ref|ZP_05167604.1| metal-activated pyridoxal protein [Brucella pinnipedialis
           M163/99/10]
 gi|261313198|ref|ZP_05952395.1| alanine racemase domain-containing protein [Brucella pinnipedialis
           M163/99/10]
 gi|261302224|gb|EEY05721.1| alanine racemase domain-containing protein [Brucella pinnipedialis
           M163/99/10]
          Length = 355

 Score = 46.3 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 52/324 (16%), Positives = 90/324 (27%), Gaps = 15/324 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           + TP  L+D  +++ N++ A      AGVKL   +K            +    G T   L
Sbjct: 11  VDTPAILVDVDRVVANIEKAQAHADAAGVKLRPHIKTHKLPFFARMQVKAGAVGITCQKL 70

Query: 61  YEVM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E   +           YN+  ++        +    I  TV         AQ    +  
Sbjct: 71  GEAEVMADAGLTDIFLPYNILGQEKLDRLHALHRRITISVTVDNKTSLAGLAQHFMNEKR 130

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
                    +         P           I  +   +  +                 L
Sbjct: 131 PLKVLVECDTGMGRCGVQTPGQARELAH---IIEKSAGLCFVGLMTYPATGRGDEAERWL 187

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
           +             E IS GG         P +      +  +  Y  +  +  G A + 
Sbjct: 188 REARDLLAADGIACETISSGGT--PDMWRIPAETVVTEYRPGTYIYFDRYQVAEGAATIN 245

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLA 299
           +        + +S       I+D+  +A   D L   +   +        A V G S   
Sbjct: 246 DCALTVLATV-VSHPTPERAIIDAGSKALSSDTLGLADFGELMDRP---LARVTGLSEEH 301

Query: 300 GDIFGEFHFEKPVKIGDRI-SFED 322
           G + G+      + IGDR+    D
Sbjct: 302 GKVTGDV---ANLNIGDRVRVIPD 322


>gi|90578385|ref|ZP_01234196.1| arginine decarboxylase [Vibrio angustum S14]
 gi|90441471|gb|EAS66651.1| arginine decarboxylase [Vibrio angustum S14]
          Length = 639

 Score = 46.3 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 81/303 (26%), Gaps = 51/303 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL-------N 49
           P  +   + + + +D+       A            +  +K      +   +        
Sbjct: 61  PVLVRFPEVMHHRVDSLCSAFNQAIENYGYTGDYLAVYPIKVNQQQEVVSEILKSQYAKQ 120

Query: 50  QYMDGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
           Q   G  + S  E+M  L   +        N       I        L +   I+   +S
Sbjct: 121 QRQLGLEAGSKPELMAVLAMAQEASSVIVCNGYKDKEYIRLALIGEKLGHEVYIVLEKLS 180

Query: 103 QLNKFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKI--------ES 153
           +L    ++A++L     L +     S  K          S+ G      +         +
Sbjct: 181 ELRIILEQAKELGVTPRLGLRARLASQGKGKWQASGGEKSKFGLSASQVLTVVDELRQRN 240

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
            +  +  L FH   +    +           +  E       I  + +GGG+    +   
Sbjct: 241 MLDCLQLLHFHLGSQIANIRDVRNGVGEAGRVYAELKKIGVGITTVDVGGGLAVDYEGTR 300

Query: 211 VKDFCQR-----------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE 253
            ++ C                   +    +    +I  E G  +  +   L T V+ I  
Sbjct: 301 CQNSCSMNYSINEYANNIVYVLGDICTEYDIAMPRIISESGRNLTAHHAVLITDVVGIES 360

Query: 254 NIK 256
              
Sbjct: 361 YKP 363


>gi|161620802|ref|YP_001594688.1| alanine racemase [Brucella canis ATCC 23365]
 gi|161337613|gb|ABX63917.1| Alanine racemase [Brucella canis ATCC 23365]
          Length = 355

 Score = 46.3 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 52/324 (16%), Positives = 89/324 (27%), Gaps = 15/324 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           + TP  L+D  +++ N++ A      AGVKL   +K            +    G T   L
Sbjct: 11  VDTPAILVDVDRVVANIEKAQAHADAAGVKLRPHIKTHKLPFFARMQVKAGAVGITCQKL 70

Query: 61  YEVM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E   +           YN+  ++        +    I  TV         AQ    +  
Sbjct: 71  GEAEVMADAGLTDIFLPYNILGQEKLDRLHALHRRITISVTVDNKTSLAGLAQHFMNEKR 130

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
                    +         P           I  +   +                    L
Sbjct: 131 PLKVLVECDTGMGRCGVQTPGQARELAH---IIEKSAGLCFGGLMTYPATGRGDEAERWL 187

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
           +             E IS GG         P +      +  +  Y  +  +  G A + 
Sbjct: 188 REARDLLAADGIACETISSGGT--PDMWRIPAETVVTEYRPGTYIYFDRYQVAEGAATIN 245

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLA 299
           +        + +S       I+D+  +A   D L   +   +        A V G S   
Sbjct: 246 DCALTVLATV-VSHPTPKRAIIDAGSKALSSDTLGLADFGELMDRP---LARVTGLSEEH 301

Query: 300 GDIFGEFHFEKPVKIGDRI-SFED 322
           G + G+      + IGDR+    D
Sbjct: 302 GKVTGDV---ANLNIGDRVRVIPD 322


>gi|154251070|ref|YP_001411894.1| alanine racemase domain-containing protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154155020|gb|ABS62237.1| alanine racemase domain protein [Parvibaculum lavamentivorans DS-1]
          Length = 381

 Score = 45.9 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 22/80 (27%), Gaps = 2/80 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           I TP  ++D      N+       K + + +    K      +    +     G   + L
Sbjct: 22  IPTPALVLDLDAFERNVARMAEHCKVSNLSIRPHAKTHKCVTIAKAQIAAGAVGQCCAKL 81

Query: 61  YEVMLGHEKFGGETHAYNVA 80
            E        G E+      
Sbjct: 82  GEAE-AMAAGGIESILITSP 100


>gi|256848377|ref|ZP_05553820.1| alanine racemase [Lactobacillus coleohominis 101-4-CHN]
 gi|256714975|gb|EEU29953.1| alanine racemase [Lactobacillus coleohominis 101-4-CHN]
          Length = 378

 Score = 45.9 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 23/208 (11%), Positives = 58/208 (27%), Gaps = 8/208 (3%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKC----FAAWGMFDTLNQYM-DGTTSSSLYE 62
           ++D   L +N+         AG  +   +K          +   L++    G   + L E
Sbjct: 12  VVDLGALRHNIRAQKAALP-AGSHIFGVVKADAYGNGMTQVAHVLSEEGVAGFCVALLDE 70

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                     ET                 N  ++   +V  L +++  AQ  H +  L++
Sbjct: 71  GFTLRNAGLQETILVLGITPVQYAPLAAENGISLTVGSVDWLKEYQQVAQTNHVRQPLKV 130

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           +  +      +   +    +   +     E E + +         ++     F   L   
Sbjct: 131 HLGLDTGMGRIGFQDVTEFKQALQLVQTPEFEFEGI--FTHFATVDSADKTYFEHQLTKW 188

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYP 210
           ++       +  ++ +            
Sbjct: 189 KQFLAVVDHRPRYVHMANSATGLWHQQD 216


>gi|3421147|gb|AAC68515.1| arginine decarboxylase [Barbarea vulgaris]
          Length = 407

 Score = 45.9 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 62/204 (30%), Gaps = 27/204 (13%)

Query: 30  VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82
            + +  +K      + + + ++      G  + S  E++L          +       +K
Sbjct: 1   YQGVYPVKGNQDRFVVEDIVRFGSPFRFGLEAGSKPEILLAMSCLCKGSPDAFLVCNGFK 60

Query: 83  DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134
           D E  ++            I+     +L+   D +QK++ +   GLR      +S    +
Sbjct: 61  DAEYISLALLGRKLALNTVIVLEQEEELDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGS 120

Query: 135 DPNRPFSRLGEKCKDKIES--------EIKNVNGLMFHNNCENKS---FLCFSAMLKNIE 183
                  + G      +           +  +  L FH   +  S        A    + 
Sbjct: 121 TSGEKG-KFGLTTTQIVRVVSKLSQSGMLDRLQLLHFHIGSQIPSTSLLSDGVAEAAQLY 179

Query: 184 KEFGHFITQIEWISLGGGIHFTDK 207
            E       ++ I +GGG+     
Sbjct: 180 CELVRLGAHMKVIDIGGGLGIDYD 203


>gi|254699959|ref|ZP_05161787.1| metal-activated pyridoxal protein [Brucella suis bv. 5 str. 513]
 gi|261750439|ref|ZP_05994148.1| alanine racemase domain-containing protein [Brucella suis bv. 5
           str. 513]
 gi|261740192|gb|EEY28118.1| alanine racemase domain-containing protein [Brucella suis bv. 5
           str. 513]
          Length = 355

 Score = 45.9 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 52/324 (16%), Positives = 89/324 (27%), Gaps = 15/324 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           + TP  L+D  +++ N++ A      AGVKL   +K            +    G T   L
Sbjct: 11  VDTPAILVDVDRVVANIEKAQAHADAAGVKLRPHIKTHKLPFFARMQVKAGAVGITCQKL 70

Query: 61  YEVM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E   +           YN+  ++        +    I  TV         AQ    +  
Sbjct: 71  GEAEVMADAGLTDIFLPYNILGQEKLDRLHALHRRITISVTVDNKTSLAGLAQHFMNEKR 130

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
                    +         P           I  +   +                    L
Sbjct: 131 PLKVLVECDTGMGRCGVQTPGQARELAH---IIEKSAGLCFGGLMTYPATGRGDEAERWL 187

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
           +             E IS GG         P +      +  +  Y  +  +  G A + 
Sbjct: 188 REARDLLAADGIACETISSGGT--PDMWRIPAETVVTEYRPGTYIYFDRYQVAEGAATIN 245

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLA 299
           +        + +S       I+D+  +A   D L   +   +        A V G S   
Sbjct: 246 DCALTVLATV-VSHPTPERAIIDAGSKALSSDTLGLADFGELMDRP---LARVTGLSEEH 301

Query: 300 GDIFGEFHFEKPVKIGDRI-SFED 322
           G + G+      + IGDR+    D
Sbjct: 302 GKVTGDV---ANLNIGDRVRVIPD 322


>gi|23500480|ref|NP_699920.1| amino acid processing-like protein [Brucella suis 1330]
 gi|148557939|ref|YP_001257694.1| amino acid processing-like protein [Brucella ovis ATCC 25840]
 gi|163844874|ref|YP_001622529.1| hypothetical protein BSUIS_B0735 [Brucella suis ATCC 23445]
 gi|254703081|ref|ZP_05164909.1| metal-activated pyridoxal protein [Brucella suis bv. 3 str. 686]
 gi|254711007|ref|ZP_05172818.1| metal-activated pyridoxal protein [Brucella pinnipedialis B2/94]
 gi|256015507|ref|YP_003105516.1| amino acid processing enzyme-related protein [Brucella microti CCM
           4915]
 gi|256029389|ref|ZP_05443003.1| metal-activated pyridoxal protein [Brucella pinnipedialis
           M292/94/1]
 gi|256043620|ref|ZP_05446547.1| metal-activated pyridoxal protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256059078|ref|ZP_05449287.1| metal-activated pyridoxal protein [Brucella neotomae 5K33]
 gi|256111342|ref|ZP_05452368.1| metal-activated pyridoxal protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|256157582|ref|ZP_05455500.1| metal-activated pyridoxal protein [Brucella ceti M490/95/1]
 gi|256253443|ref|ZP_05458979.1| metal-activated pyridoxal protein [Brucella ceti B1/94]
 gi|260167522|ref|ZP_05754333.1| metal-activated pyridoxal protein [Brucella sp. F5/99]
 gi|260564811|ref|ZP_05835296.1| alanine racemase domain-containing protein [Brucella melitensis bv.
           1 str. 16M]
 gi|260567990|ref|ZP_05838459.1| alanine racemase domain-containing protein [Brucella suis bv. 4
           str. 40]
 gi|261220568|ref|ZP_05934849.1| alanine racemase domain-containing protein [Brucella ceti B1/94]
 gi|261318591|ref|ZP_05957788.1| alanine racemase domain-containing protein [Brucella pinnipedialis
           B2/94]
 gi|261323024|ref|ZP_05962221.1| alanine racemase domain-containing protein [Brucella neotomae 5K33]
 gi|261753697|ref|ZP_05997406.1| alanine racemase domain-containing protein [Brucella suis bv. 3
           str. 686]
 gi|261756939|ref|ZP_06000648.1| alanine racemase domain-containing protein [Brucella sp. F5/99]
 gi|265986391|ref|ZP_06098948.1| alanine racemase domain-containing protein [Brucella pinnipedialis
           M292/94/1]
 gi|265990040|ref|ZP_06102597.1| alanine racemase domain-containing protein [Brucella melitensis bv.
           1 str. Rev.1]
 gi|265992849|ref|ZP_06105406.1| alanine racemase domain-containing protein [Brucella melitensis bv.
           3 str. Ether]
 gi|265996085|ref|ZP_06108642.1| alanine racemase domain-containing protein [Brucella ceti
           M490/95/1]
 gi|294853480|ref|ZP_06794152.1| metal-activated pyridoxal protein [Brucella sp. NVSL 07-0026]
 gi|23464109|gb|AAN33925.1| amino acid processing enzyme-related protein [Brucella suis 1330]
 gi|148369224|gb|ABQ62096.1| amino acid processing enzyme-related protein [Brucella ovis ATCC
           25840]
 gi|163675597|gb|ABY39707.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
 gi|255998167|gb|ACU49854.1| amino acid processing enzyme-related protein [Brucella microti CCM
           4915]
 gi|260152454|gb|EEW87547.1| alanine racemase domain-containing protein [Brucella melitensis bv.
           1 str. 16M]
 gi|260154655|gb|EEW89736.1| alanine racemase domain-containing protein [Brucella suis bv. 4
           str. 40]
 gi|260919152|gb|EEX85805.1| alanine racemase domain-containing protein [Brucella ceti B1/94]
 gi|261297814|gb|EEY01311.1| alanine racemase domain-containing protein [Brucella pinnipedialis
           B2/94]
 gi|261299004|gb|EEY02501.1| alanine racemase domain-containing protein [Brucella neotomae 5K33]
 gi|261736923|gb|EEY24919.1| alanine racemase domain-containing protein [Brucella sp. F5/99]
 gi|261743450|gb|EEY31376.1| alanine racemase domain-containing protein [Brucella suis bv. 3
           str. 686]
 gi|262550382|gb|EEZ06543.1| alanine racemase domain-containing protein [Brucella ceti
           M490/95/1]
 gi|262763719|gb|EEZ09751.1| alanine racemase domain-containing protein [Brucella melitensis bv.
           3 str. Ether]
 gi|263000709|gb|EEZ13399.1| alanine racemase domain-containing protein [Brucella melitensis bv.
           1 str. Rev.1]
 gi|264658588|gb|EEZ28849.1| alanine racemase domain-containing protein [Brucella pinnipedialis
           M292/94/1]
 gi|294819135|gb|EFG36135.1| metal-activated pyridoxal protein [Brucella sp. NVSL 07-0026]
          Length = 355

 Score = 45.9 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 52/324 (16%), Positives = 89/324 (27%), Gaps = 15/324 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           + TP  L+D  +++ N++ A      AGVKL   +K            +    G T   L
Sbjct: 11  VDTPAILVDVDRVVANIEKAQAHADAAGVKLRPHIKTHKLPFFARMQVKAGAVGITCQKL 70

Query: 61  YEVM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E   +           YN+  ++        +    I  TV         AQ    +  
Sbjct: 71  GEAEVMADAGLTDIFLPYNILGQEKLDRLHALHRRITISVTVDNKTSLAGLAQHFMNEKR 130

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
                    +         P           I  +   +                    L
Sbjct: 131 PLKVLVECDTGMGRCGVQTPGQARELAH---IIEKSAGLCFGGLMTYPATGRGDEAERWL 187

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
           +             E IS GG         P +      +  +  Y  +  +  G A + 
Sbjct: 188 REARDLLAADGIACETISSGGT--PDMWRIPAETVVTEYRPGTYIYFDRYQVAEGAATIN 245

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLA 299
           +        + +S       I+D+  +A   D L   +   +        A V G S   
Sbjct: 246 DCALTVLATV-VSHPTPERAIIDAGSKALSSDTLGLADFGELMDRP---LARVTGLSEEH 301

Query: 300 GDIFGEFHFEKPVKIGDRI-SFED 322
           G + G+      + IGDR+    D
Sbjct: 302 GKVTGDV---ANLNIGDRVRVIPD 322


>gi|17988891|ref|NP_541524.1| metal-activated pyridoxal protein [Brucella melitensis bv. 1 str.
           16M]
 gi|225629220|ref|ZP_03787253.1| metal-activated pyridoxal protein [Brucella ceti str. Cudo]
 gi|17984718|gb|AAL53788.1| metal-activated pyridoxal enzyme [Brucella melitensis bv. 1 str.
           16M]
 gi|225615716|gb|EEH12765.1| metal-activated pyridoxal protein [Brucella ceti str. Cudo]
          Length = 360

 Score = 45.9 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 52/324 (16%), Positives = 89/324 (27%), Gaps = 15/324 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           + TP  L+D  +++ N++ A      AGVKL   +K            +    G T   L
Sbjct: 16  VDTPAILVDVDRVVANIEKAQAHADAAGVKLRPHIKTHKLPFFARMQVKAGAVGITCQKL 75

Query: 61  YEVM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E   +           YN+  ++        +    I  TV         AQ    +  
Sbjct: 76  GEAEVMADAGLTDIFLPYNILGQEKLDRLHALHRRITISVTVDNKTSLAGLAQHFMNEKR 135

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
                    +         P           I  +   +                    L
Sbjct: 136 PLKVLVECDTGMGRCGVQTPGQARELAH---IIEKSAGLCFGGLMTYPATGRGDEAERWL 192

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
           +             E IS GG         P +      +  +  Y  +  +  G A + 
Sbjct: 193 REARDLLAADGIACETISSGGT--PDMWRIPAETVVTEYRPGTYIYFDRYQVAEGAATIN 250

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLA 299
           +        + +S       I+D+  +A   D L   +   +        A V G S   
Sbjct: 251 DCALTVLATV-VSHPTPERAIIDAGSKALSSDTLGLADFGELMDRP---LARVTGLSEEH 306

Query: 300 GDIFGEFHFEKPVKIGDRI-SFED 322
           G + G+      + IGDR+    D
Sbjct: 307 GKVTGDV---ANLNIGDRVRVIPD 327


>gi|3421178|gb|AAC68524.1| arginine decarboxylase [Nasturtium officinale]
          Length = 407

 Score = 45.9 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 62/204 (30%), Gaps = 27/204 (13%)

Query: 30  VKLLLALKCFAAWGMFDTLNQYMD----GTTSSSLYEVMLGHEK---FGGETHAYNVAYK 82
            + +  +K      + + + ++      G  + S  E++L          +       +K
Sbjct: 1   YQGVYPVKGNQDRFVVEDIVRFGSPFRFGLEAGSKPEILLAMSCLCKGSPDAFLVCNGFK 60

Query: 83  DCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQKLHKKI--GLRINPSVSYSKFILA 134
           D E  ++            I+     +L+   D +QK++ +   GLR      +S    +
Sbjct: 61  DAEYISLALLGRKLALNTVIVLEQEEELDLVIDLSQKMNVRPVIGLRAKLRTKHSGHFGS 120

Query: 135 DPNRPFSRLGEKCKDKIES--------EIKNVNGLMFHNNCENKS---FLCFSAMLKNIE 183
                  + G      +           +  +  L FH   +  S        A    + 
Sbjct: 121 TSGEKG-KFGLTTTQIVRVVSKLSQSGMLDCLQLLHFHIGSQIPSTSLLSDGVAEAAQLY 179

Query: 184 KEFGHFITQIEWISLGGGIHFTDK 207
            E       ++ I +GGG+     
Sbjct: 180 CELVRLGAHMKVIDIGGGLGIDYD 203


>gi|149920522|ref|ZP_01908990.1| arginine decarboxylase [Plesiocystis pacifica SIR-1]
 gi|149818703|gb|EDM78148.1| arginine decarboxylase [Plesiocystis pacifica SIR-1]
          Length = 676

 Score = 45.9 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/204 (11%), Positives = 60/204 (29%), Gaps = 29/204 (14%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAG--------VKLLLALKCFAAWGMFDTL----N 49
           + +P+ L     ++  ++      + A            +  LK      + +T+     
Sbjct: 96  VHSPFVLRFPGMIVAAMERLHRAFELAAEENEYQGEHMGMYPLKVNQRRSVVETVVAARE 155

Query: 50  QYMDGTTSSSLYEVMLGHEKFGGETHAYNVAYKDC------EIDAVLSNCDTIIFNTVSQ 103
           +   G  + S  E++L   +   +       YKD          A L +   ++  ++ +
Sbjct: 156 RCAYGLEAGSKPELLLAMAQPVSKAPLICNGYKDREFIRLAFHAAELGHEVILVLESMRE 215

Query: 104 LNKFKDKAQKLHKKIGLRINPS---VSYSKFILADPNRPFSRLGEKCKDKIE-------- 152
           + ++ D   +   K    +       S             S+ G    + +E        
Sbjct: 216 VQRYLDIYAQGEWKATPFLGMRAKLYSRGSGRWQSSGGERSKFGLTTNEMLEVVRRLEGA 275

Query: 153 SEIKNVNGLMFHNNCENKSFLCFS 176
             +  ++ L FH   +        
Sbjct: 276 DALDRLSLLHFHIGSQITQIKRIK 299


>gi|163797415|ref|ZP_02191367.1| alanine racemase-like protein [alpha proteobacterium BAL199]
 gi|159177334|gb|EDP61891.1| alanine racemase-like protein [alpha proteobacterium BAL199]
          Length = 378

 Score = 45.9 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 21/174 (12%), Positives = 50/174 (28%), Gaps = 9/174 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           I TP  +ID      NLD       + G+++    K   +  +    +++   G     +
Sbjct: 16  IDTPALVIDLDAFERNLDRMAKFAHDTGIRVRPHAKTHKSPAVARAQMHRGAVGQCCQKV 75

Query: 61  YEVM-LGHEKFGG---ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
            E   L                 +               +  +   Q+  + + A++   
Sbjct: 76  GEAEVLVQAGIENVLVSNQVVGASKLARLAALARRAWIGVCADDAEQVRAYGEAARRAQV 135

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170
            + + +   V  +         P +   E  K   ++   +  GL  ++     
Sbjct: 136 DLHVLVEIDVGAA----RCGVLPGAPAVELAKMIADTPGLSFEGLQAYHGSAQH 185


>gi|254720286|ref|ZP_05182097.1| metal-activated pyridoxal protein [Brucella sp. 83/13]
 gi|265985304|ref|ZP_06098039.1| alanine racemase domain-containing protein [Brucella sp. 83/13]
 gi|306839821|ref|ZP_07472620.1| metal-activated pyridoxal protein [Brucella sp. NF 2653]
 gi|264663896|gb|EEZ34157.1| alanine racemase domain-containing protein [Brucella sp. 83/13]
 gi|306405097|gb|EFM61377.1| metal-activated pyridoxal protein [Brucella sp. NF 2653]
          Length = 355

 Score = 45.9 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 52/324 (16%), Positives = 91/324 (28%), Gaps = 15/324 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           + TP  L+D  +++ N++ A      AGVKL   +K   +        +    G T   L
Sbjct: 11  VDTPAILVDVDRVVANIEKAQARADAAGVKLRPHIKTHKSPFFARMQVKAGAVGITCQKL 70

Query: 61  YEVM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E   +           YN+  ++        +    I  TV         AQ+   +  
Sbjct: 71  GEAEVMADAGLTDIFLPYNILGQEKLDRLHALHRRITISVTVDNKTSLAGLAQRFMNEKR 130

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
                    +         P           I  +   +                    L
Sbjct: 131 PLKVLVECDTGMGRCGVQTPGQARELAR---IIEKSAGLCFGGLMTYPATGRGDEAERWL 187

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
           +             E IS GG         P +      +  +  Y  +  +  G A + 
Sbjct: 188 RAARDLLAADGIACETISSGGT--PDMWRIPAETVVTEYRPGTYIYFDRYQVAEGAATIN 245

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLA 299
           +        + +S       I+D+  +A   D L   +   +        A V G S   
Sbjct: 246 DCALTVLATV-VSHPTPERAIIDAGSKALSSDTLGLADFGELMDRP---LARVTGLSEEH 301

Query: 300 GDIFGEFHFEKPVKIGDRI-SFED 322
           G + G+      + IGDR+    D
Sbjct: 302 GKVTGDV---ANLNIGDRVRVIPD 322


>gi|167626353|ref|YP_001676853.1| alanine racemase [Francisella philomiragia subsp. philomiragia ATCC
           25017]
 gi|226711043|sp|B0TYB0|ALR_FRAP2 RecName: Full=Alanine racemase
 gi|167596354|gb|ABZ86352.1| Alanine racemase [Francisella philomiragia subsp. philomiragia ATCC
           25017]
          Length = 365

 Score = 45.9 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 62/190 (32%), Gaps = 12/190 (6%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAA----WGMFDTLNQYMDGTTSSSLYEVM 64
           I KQ L NN+            K+   +K  A       + +  +  +D    ++  E  
Sbjct: 6   ISKQTLTNNIKIIREYVG--NAKICFPVKANAYGHGIEEIVENTHDLVDFFAVANSLEAF 63

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       + V Y +     V  N   +       + K +  A++L+KKI + IN 
Sbjct: 64  RVTAITKKPVLVFGVIYYEYLERMVSEN-IRVSIQDYDDIEKLEQIAKELNKKIYVHINV 122

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
           +   ++  +   +          K    S+   + G+  H  C +      +A  K    
Sbjct: 123 NTGMNRMGVCYNDVC-----RTIKRAYNSKWIILEGVYSHLACADNRDHPTNAKQKKRFS 177

Query: 185 EFGHFITQIE 194
           E   +  ++ 
Sbjct: 178 EIVEYAKELS 187


>gi|284172920|ref|YP_003406301.1| alanine racemase [Haloterrigena turkmenica DSM 5511]
 gi|284017680|gb|ADB63628.1| alanine racemase domain protein [Haloterrigena turkmenica DSM 5511]
          Length = 371

 Score = 45.5 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 26/219 (11%), Positives = 65/219 (29%), Gaps = 15/219 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQY--MDGTTSSS 59
           ++TP  L+D   +  N++    +     V L   +K      +    ++     G    +
Sbjct: 12  LETPALLVDIDAMERNIEEYAAVADENDVTLRSHIKTHKNAELAALEDEMTDGGGICCQT 71

Query: 60  LYEVM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCDT----IIFNTVSQLNKFKDKAQKL 114
           L EV  +          +Y V  +         +          ++ + ++  +D AQ  
Sbjct: 72  LGEVETMARNGIDDIYLSYQVVGERKLDRFCWLSQKVEKLATTVDSAATIDLLQDAAQAH 131

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174
                + +   V   +     P      L E+  +        +     H   E ++   
Sbjct: 132 EITADVILEVDVGLHRT-GVAPGPEAVALAERIDEAANLSFDGILAYESHVKAEAETESE 190

Query: 175 FSAML-------KNIEKEFGHFITQIEWISLGGGIHFTD 206
           F  +        +++  +       ++ + +GG      
Sbjct: 191 FDELCWEAMELGEDVVDDIEAAGIPVDEVKVGGTATSRY 229


>gi|83772085|dbj|BAE62215.1| unnamed protein product [Aspergillus oryzae]
          Length = 128

 Score = 45.5 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 8/49 (16%), Positives = 17/49 (34%), Gaps = 7/49 (14%)

Query: 290 AMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGI 337
             + G +C   D        +   K+ D + ++++          FNG 
Sbjct: 1   MPIWGPTCDGCDYVVRGATLRCEAKVRDWLVYKNMGA------TRFNGF 43


>gi|300310473|ref|YP_003774565.1| amino acid aldolase or racemase [Herbaspirillum seropedicae SmR1]
 gi|300073258|gb|ADJ62657.1| amino acid aldolase or racemase protein [Herbaspirillum seropedicae
           SmR1]
          Length = 376

 Score = 45.5 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 27/214 (12%), Positives = 54/214 (25%), Gaps = 20/214 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  LID  ++  N+          GV+    +K      +    L     G T S+L
Sbjct: 6   LPTPAALIDVARMQRNITRMQQRMDALGVRFRPHVKTTKCNEVVQAQLQAGASGITVSTL 65

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDA-----VLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E        G     Y V     ++              I+ ++V         A    
Sbjct: 66  KEAEQFFAA-GISDIVYAVGMAPTKLGQALALRRQGCNLKIVADSVVCAEAI--VAFGQA 122

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE------- 168
           ++    +   +            P         + + +    + G++ H           
Sbjct: 123 QEECFDVWIEIDVDGHR--SGIAPEDATLLAVGNVLHAGGMRIGGVIAHAGSSYDYDNDE 180

Query: 169 --NKSFLCFSAMLKNIEKEFGHFITQIEWISLGG 200
                     A      +         + +S+G 
Sbjct: 181 ALIAVAEQERAGCVRAAERLREAGLPCDVVSIGS 214


>gi|260829763|ref|XP_002609831.1| hypothetical protein BRAFLDRAFT_78677 [Branchiostoma floridae]
 gi|229295193|gb|EEN65841.1| hypothetical protein BRAFLDRAFT_78677 [Branchiostoma floridae]
          Length = 336

 Score = 45.5 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 33/282 (11%), Positives = 76/282 (26%), Gaps = 30/282 (10%)

Query: 2   IKTPYYLIDKQKLLNNLDTA-LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSS 59
           I TP  L+D  KL  NL T  + +++ + +KL    K      +      +   G     
Sbjct: 17  IDTPALLVDLDKLEENLKTMPITLKEYSNLKLRPHAKSHKCPTLARLQVTHGAVGVCVQK 76

Query: 60  LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           L E          +    N                +I+ ++   +    D AQ++   IG
Sbjct: 77  LTEAQAMVHGGVEDVLVTNE-----------HATISIVVDSQQNIRDLSDAAQQMGVDIG 125

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK--------- 170
           + ++ +V            P   + +            + GL  +               
Sbjct: 126 VLVDVNVGMP----RCGVLPGPEVVQLASLINSLPNVTLKGLHCYQGANQHIRKAEERAE 181

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK----DYPVKDFCQRLKEFSEKYS 226
           +            K         ++++ GG   +  +     +        +   ++   
Sbjct: 182 ATAAAVEKAATALKALEDAEISCDYVTGGGTGTYMYEAKSGVFTEVQPGSYVFMDADYGR 241

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH 268
                         +  +  TV  +     + ++     + H
Sbjct: 242 NFGEDGQPVHQFHQSLFVLATVQSVPVYPNSDIVYHCGGDEH 283


>gi|91790640|ref|YP_551592.1| alanine racemase-like protein [Polaromonas sp. JS666]
 gi|91699865|gb|ABE46694.1| alanine racemase-like protein [Polaromonas sp. JS666]
          Length = 380

 Score = 45.5 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 56/171 (32%), Gaps = 11/171 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           ++TP  L+D  ++  N++         GV     +K      +   L      G T S+L
Sbjct: 9   LETPALLLDTARMDRNIERMRGRMTRHGVHFRPHVKTNKCMDVTQRLLDAGARGITVSTL 68

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCD-----TIIFNTVSQLNKFKDKAQKLH 115
            E      + G     Y V     ++   L         T+I ++V    +   +  +  
Sbjct: 69  REAEY-FSERGITDILYAVCLSPNKLAHALRLRRQGIRLTVIVDSVEMALQLNPERIQGD 127

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNN 166
            ++ + I               +P S         ++S+   V G+M H  
Sbjct: 128 DRLDVLIEIDCDGH----RSGVQPDSPALLAIAQALQSQGLAVGGVMTHAG 174


>gi|256784445|ref|ZP_05522876.1| lysine/ornithine decarboxylase [Streptomyces lividans TK24]
          Length = 158

 Score = 45.5 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 47/129 (36%), Gaps = 14/129 (10%)

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENI------KNLVIVDSSVEAHVP--DYLLYQE 277
            +   +EPG  +V +   +   V+ ++E        ++ + +       +   D L Y+ 
Sbjct: 16  HLDFVVEPGRHLVADHGAIRAHVVRLTERRAADGERQHWLYLSCGKFNGLYEMDALQYRL 75

Query: 278 SATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP----VKIGDRISFEDVAGYNINRKNW 333
               +P+     A+V G +C + D +       P    +  GD +       Y  +    
Sbjct: 76  VFPGHPDGPCVPAVVAGPTCDSDDAYSHEEGLVPVPAALASGDPVWVLSCGAYATSYTTR 135

Query: 334 -FNGI-NMP 340
            FNG   +P
Sbjct: 136 GFNGFAPLP 144


>gi|239834177|ref|ZP_04682505.1| alanine racemase domain-containing protein [Ochrobactrum
           intermedium LMG 3301]
 gi|239822240|gb|EEQ93809.1| alanine racemase domain-containing protein [Ochrobactrum
           intermedium LMG 3301]
          Length = 354

 Score = 45.5 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 50/329 (15%), Positives = 91/329 (27%), Gaps = 25/329 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSSL 60
           + TP  LID  ++  N+          GVKL   +K            +    G T   L
Sbjct: 10  VDTPAILIDIDRVKANIARVQAHADAIGVKLRPHIKTHKLPFFAKMQVEAGAAGITCQKL 69

Query: 61  YEVM-LGHEKFGGETHAYN---VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
            E   +           YN       D           ++  +  + L     +      
Sbjct: 70  GEAEVMADAGLTDIFLPYNILGREKLDRLHALHQRVTLSVTVDNSTSLAGLAARFADEKH 129

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK--IESEIKNVNGLMFHNNCENKSFLC 174
            + + +               R   +   +  +   I  +   +                
Sbjct: 130 PLKVLVECDTG--------MGRCGVQTPAEALELARIIDQSAGLGFGGLMTYPAAGKPDQ 181

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
               L +  +         E IS GG         P        +  +  Y  +  +E G
Sbjct: 182 AEQWLYSARELLDANGLSCETISSGGT--PDMWRKPSDSVVTEYRPGTYIYFDRYQVEKG 239

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCG 294
            A V +      + + +S       I+D+  +A   D L   +   +    G   A V G
Sbjct: 240 AATVDDCAFTVLSTI-VSHPTAERAIIDAGSKALSSDTLGLSDFGEVR---GRSDARVVG 295

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRI-SFED 322
            S   G + G+      +K+G+R+    D
Sbjct: 296 LSEEHGKLTGDV---ADLKVGERVRIIPD 321


>gi|257460796|ref|ZP_05625897.1| GlnD family protein [Campylobacter gracilis RM3268]
 gi|257442127|gb|EEV17269.1| GlnD family protein [Campylobacter gracilis RM3268]
          Length = 368

 Score = 45.5 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 41/329 (12%), Positives = 93/329 (28%), Gaps = 12/329 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSSL 60
           I TP  LID++ +L NL         AGV L    K                 G T +  
Sbjct: 6   IDTPALLIDREIVLRNLQKMQSYADAAGVSLRPHTKTHKMPYFAKLQKSLGAAGITVAKT 65

Query: 61  YEVML-----GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E  +       + F        + ++            +   +++ Q    +   ++  
Sbjct: 66  GEAEIMAANGLKDIFIANEIVGELKFRRIIALLRAGINLSFGTDSIEQAGLIERAFERSG 125

Query: 116 KKIGLRINPSVSYS--KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHN--NCENKS 171
            K  +     V  +   F+       F +  + CK+     + + +G  +      E + 
Sbjct: 126 TKACVLAEIEVGENRSGFVEKQDFAAFIKFIKGCKNIEFRGVFSHDGHSYKAADKSECER 185

Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYL 231
               +        +    +     +   G       D+ +      ++  +  +      
Sbjct: 186 IHLAAQRRTLEFADIARELALPARVVSIGSTPSLINDFEILKGITEIRPGTYIFMDASQA 245

Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAM 291
           +       N  ++ TTV+      + +  V +           +  +  +    G     
Sbjct: 246 QAYGDYSMNAASILTTVISRPTADRIITDVGAKGLTQQRRTEGFTATPGLGRIKGTE-VW 304

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
           + G       I  +      V++GDR+  
Sbjct: 305 ING-VYDEHAIIYDRALRDAVRVGDRLEI 332


>gi|51891691|ref|YP_074382.1| putative alanine racemase [Symbiobacterium thermophilum IAM
          14863]
 gi|51855380|dbj|BAD39538.1| putative alanine racemase [Symbiobacterium thermophilum IAM
          14863]
          Length = 383

 Score = 45.5 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 17/47 (36%), Gaps = 1/47 (2%)

Query: 7  YLIDKQKLLNNLDTALYIRKNAGVKLLLALK-CFAAWGMFDTLNQYM 52
          Y++D   + NN  T     +  G++L    K       +   + +  
Sbjct: 31 YVLDLDAIRNNARTLAEAARREGIQLYFMSKQLNRNPQVIAAVAEAG 77


>gi|310815136|ref|YP_003963100.1| alanine racemase domain protein [Ketogulonicigenium vulgare Y25]
 gi|308753871|gb|ADO41800.1| alanine racemase domain protein [Ketogulonicigenium vulgare Y25]
          Length = 373

 Score = 45.5 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 22/184 (11%), Positives = 46/184 (25%), Gaps = 4/184 (2%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCF--AAWGMFDTLNQYMD-GTTS 57
           M+ TP  +ID      N+          GV L    K    A   +   + Q    G   
Sbjct: 21  MVDTPALVIDLDVFDANIARMKAYAAQMGVALRPHAKTHKSADIALLQ-MQQGGAVGVCC 79

Query: 58  SSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
             + E +   +    +    N      ++ A+ +    I     +              +
Sbjct: 80  QKVSEAVALADAGVTDILIANEVVGPAKVAALAALAGRIKLAVCADHPVQVAAYSAAAVQ 139

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
            G+ ++  V           +P     +       +   +  GL  +       +     
Sbjct: 140 AGVTLDVLVEIDCGSHRCGVQPGQPAVDLALAIDAAPNLHFAGLQSYFGRAQHIYDAAER 199

Query: 178 MLKN 181
               
Sbjct: 200 RAAL 203


>gi|260429750|ref|ZP_05783726.1| metal-activated pyridoxal enzyme [Citreicella sp. SE45]
 gi|260419233|gb|EEX12487.1| metal-activated pyridoxal enzyme [Citreicella sp. SE45]
          Length = 387

 Score = 45.5 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 28/211 (13%), Positives = 63/211 (29%), Gaps = 12/211 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTSSS 59
           I+TP  ++D   L  N+       K  G++  +  K   +  +     +     G     
Sbjct: 27  IQTPCLVLDLDALERNIKVMGDYAKAHGMRHRVHGKMHKSVDVAKLQEKLGGAVGVCCQK 86

Query: 60  LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLS-----NCDTIIFNTVSQLNKFKDKAQKL 114
           + E  +       +    N      +ID +           +  + V  + +  + A + 
Sbjct: 87  VSEAEVFARGGIKDVLVSNQVRDPQKIDRLAQLPKLGGRIIVCVDDVENVAELSEAAVRH 146

Query: 115 HKKIGLRINPSVSY--SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN--- 169
             ++ + I                    ++  E   +   + I+   G M H +      
Sbjct: 147 GTELDIFIEIDCGAGRCGVSSTPAVVEIAKAVEAAPNLNFAGIQAYQGAMQHIDSYEARK 206

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGG 200
           +      AM+++            E +S GG
Sbjct: 207 EKLDTAIAMVEDAVAGLKAEGIDCELVSGGG 237


>gi|255659976|ref|ZP_05405385.1| alanine racemase [Mitsuokella multacida DSM 20544]
 gi|260847728|gb|EEX67735.1| alanine racemase [Mitsuokella multacida DSM 20544]
          Length = 369

 Score = 45.1 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 44/327 (13%), Positives = 91/327 (27%), Gaps = 26/327 (7%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMD-GTTSSSLYEV 63
           ID   L +N +      +  G KL   +K  A    A  +     +        ++L E 
Sbjct: 10  IDLAALRHNYEEIKKNIRG-GAKLCAVVKADAYGHGALAVARVAVEAGASYLAVATLGEA 68

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +   E                E   ++    T +   +        +A + HK   + + 
Sbjct: 69  IELREAGFTVPILLLGLVLPDEARDIVDYDVTQVVCELPLAEAISREAVRQHKTAKVHLK 128

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL-MFHNNCENKSFLCFSAMLKNI 182
                 +  +         +G       +     + G+       ++K        L   
Sbjct: 129 VETGMGRIGIRP-----EEIGALAAAVKQLPNIEIEGMFSHFAMADSKDKTYTKGQLAKF 183

Query: 183 EKEFG---HFITQIEWISLGGGIHFTDKDYPVKDF-----CQRLKEFSEKYSVQIYLEPG 234
           E+          +++   +       +      D       Q     S++ +  I L+P 
Sbjct: 184 EQALRAVEEAGVKLKIRHIAESAAILEIPEAHYDMVRAGVIQYGMWPSDEVTHPIDLKPV 243

Query: 235 EAIVTNTTTLNT-TVLDISENIKNLVIVDSSVEAHVP----DYLLYQESATIYPNTGPYT 289
             +      + T    +     +  +    S  A +P    D  +       Y + G   
Sbjct: 244 MKVCAKVVFMKTLHPGESIGYGRQFIAERESRIATLPIGYADGYIRAYGNGGYVSFGGRK 303

Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGD 316
           A + GR C+   +  +      VK GD
Sbjct: 304 APIAGRVCMDQ-VMVDVTDLPDVKEGD 329


>gi|91790642|ref|YP_551594.1| D-3-hydroxyaspartate aldolase [Polaromonas sp. JS666]
 gi|91699867|gb|ABE46696.1| D-3-hydroxyaspartate aldolase [Polaromonas sp. JS666]
          Length = 371

 Score = 45.1 bits (105), Expect = 0.015,   Method: Composition-based stats.
 Identities = 13/94 (13%), Positives = 26/94 (27%), Gaps = 1/94 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60
           + TP  ++D      NL       K + V+L    K      +    +     G     +
Sbjct: 16  VDTPALVLDLDAFERNLHRMADALKGSQVRLRPHAKSHKCPEIALRQIALGAVGVCCQKV 75

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCD 94
            E  +       +    N      +I  ++    
Sbjct: 76  SEAAVFVAAGVRDVLITNEVVGPVKIRHLMELAR 109


>gi|330447659|ref|ZP_08311307.1| arginine decarboxylase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491850|dbj|GAA05804.1| arginine decarboxylase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 639

 Score = 45.1 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 80/303 (26%), Gaps = 51/303 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL-------N 49
           P  +   + + + +D+   +   A            +  +K      +   +        
Sbjct: 61  PVLVRFPEVMHHRVDSLCSVFNQAIENYGYQGDYLAVYPIKVNQQEEVVSEILKSQYAKQ 120

Query: 50  QYMDGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
           Q   G  + S  E+M  L   +        N       I        L +   I+   +S
Sbjct: 121 QRQLGLEAGSKPELMAVLAMAQEASSVIVCNGYKDKEYIRLALIGEKLGHEVYIVLEKLS 180

Query: 103 QLNKFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEIK----- 156
           +L    ++AQ+L     L +     S  K          S+ G      +    +     
Sbjct: 181 ELKIILEQAQELGVTPRLGLRARLASQGKGKWQASGGEKSKFGLSASQVLTVVDELRQRN 240

Query: 157 ---NVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
               +  L FH   +    +           +  E       I  + +GGG+    +   
Sbjct: 241 MLGCLQLLHFHLGSQIANIRDVRSGVGEAGRVYAELKKLGAGITTVDVGGGLAVDYEGTR 300

Query: 211 VKDFCQR-----------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE 253
            +  C                   +    E    +I  E G  +  +   L T V+ I  
Sbjct: 301 CQSSCSMNYSINEYANNIVYVLGDICTEYEMPMPRIISESGRNLTAHHAVLITDVVGIES 360

Query: 254 NIK 256
              
Sbjct: 361 YKP 363


>gi|307265382|ref|ZP_07546939.1| alanine racemase domain protein [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|306919666|gb|EFN49883.1| alanine racemase domain protein [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 373

 Score = 45.1 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 51/162 (31%), Gaps = 7/162 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           + TP +L+D  KL +N+       +  G +L   +K   +  +      Y   G    ++
Sbjct: 7   LPTPSFLVDLDKLESNIKEMADTCRKNGKELWPMVKTHKSTAIAKMQQNYGSKGFLVGTI 66

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDA---VLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
            E     E  F     AY VA K+               + F+ V    K ++   ++  
Sbjct: 67  DEAEKLTENGFKEIMIAYPVASKENIERILTLAQKAHVILSFDGVEAAAKVEETCNRIGL 126

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNV 158
            +   I                    L EK K     + K +
Sbjct: 127 SMDYLIIIDSGL--HRFGVVPEKVLELAEKLKSFTHLKFKGI 166


>gi|301059307|ref|ZP_07200234.1| alanine racemase, N-terminal domain protein [delta proteobacterium
           NaphS2]
 gi|300446536|gb|EFK10374.1| alanine racemase, N-terminal domain protein [delta proteobacterium
           NaphS2]
          Length = 370

 Score = 45.1 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 61/208 (29%), Gaps = 10/208 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I TP+ L+D+  + +NL          G  +   +K   +  +        D + + +  
Sbjct: 12  IPTPFILVDEGIVKSNLRRIHDYAHRHGFSVRAHVKTHKSLALARMQMAMGDVSIAVAKA 71

Query: 62  EVMLGHEKFGGETHAY---NVAYKDCEIDAVLSNCDTII--FNTVSQLNKFKDKAQKLHK 116
           E        G          V     E  A L+    I    ++   +   +D A     
Sbjct: 72  EEAQVMVGLGHVDITVAYPAVGKARAEKIARLAGTHKIGVAVDSEYVMKGLEDAATAYGV 131

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS----F 172
           +IG+ +       +       +    LGE  +       + V   + H   E       F
Sbjct: 132 EIGISVMLDAGLHRC-GVSDPQALITLGEYARQSPSLRYEGVQMYVGHLYGEAADDPASF 190

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGG 200
              + +     +         E +SLG 
Sbjct: 191 ERINRIWDPAYESLCSVGLTPERVSLGS 218


>gi|115456836|ref|NP_001052018.1| Os04g0107600 [Oryza sativa Japonica Group]
 gi|75296441|sp|Q7XRA1|ADC2_ORYSJ RecName: Full=Arginine decarboxylase 2; Short=ARGDC2; Short=OsADC2
 gi|38345309|emb|CAE02767.2| OSJNBb0085F13.14 [Oryza sativa Japonica Group]
 gi|113563589|dbj|BAF13932.1| Os04g0107600 [Oryza sativa Japonica Group]
 gi|116310897|emb|CAH67837.1| B0616E02-H0507E05.13 [Oryza sativa Indica Group]
 gi|125546953|gb|EAY92775.1| hypothetical protein OsI_14579 [Oryza sativa Indica Group]
 gi|125589100|gb|EAZ29450.1| hypothetical protein OsJ_13525 [Oryza sativa Japonica Group]
 gi|215765040|dbj|BAG86737.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215768092|dbj|BAH00321.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 623

 Score = 45.1 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 25/267 (9%), Positives = 68/267 (25%), Gaps = 36/267 (13%)

Query: 12  QKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSS 59
             L N LD+               +  + +  +K      +   L  +      G  + S
Sbjct: 76  DVLKNRLDSLHAAFHGAVDSTGYASRYQGVFPIKVNQNKAVVQDLVTFGHGYSYGLEAGS 135

Query: 60  LYEVMLG---HEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDK 110
             E+++      K     +     YKD +  A       +     I+     +L+   ++
Sbjct: 136 KPELLIAMSCLAKAKPGAYLVCNGYKDADYVALALSARAMGLNAIIVLEMEEELDIVVEQ 195

Query: 111 AQKLHKKIGLRINPSVSY-SKFILADPNRPFSRLGEKCKDK--------IESEIKNVNGL 161
           + +L  +  + +   +                + G                 ++  +  L
Sbjct: 196 SARLGVEPVIGVRAKLLTKIPGHFGSTAGKHGKFGMLADKIYEVAGKLKKMGKLHWLKLL 255

Query: 162 MFHNNCENKSFLCFSAMLKNIEKEFGHFITQ-----IEWISLGGGIHFTDKDYPVKDFCQ 216
            +H      +              +   + +     +  +  GGG+              
Sbjct: 256 HYHVGSMIPTTDIVYNAAAEAAGIYCALVKEHGATGMTTLDCGGGLGVDYDGTRSGSSDM 315

Query: 217 RLKEFSEKYSVQIYLEPGEAIVTNTTT 243
            +    E+Y+    ++       +   
Sbjct: 316 SVAYGLEQYA-SSIVQAVRLTCDDNGV 341


>gi|152981283|ref|YP_001351715.1| low-specificity D-threonine aldolase [Janthinobacterium sp.
           Marseille]
 gi|151281360|gb|ABR89770.1| low-specificity D-threonine aldolase [Janthinobacterium sp.
           Marseille]
          Length = 379

 Score = 45.1 bits (105), Expect = 0.017,   Method: Composition-based stats.
 Identities = 22/176 (12%), Positives = 47/176 (26%), Gaps = 10/176 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGTTS--S 58
           + TP  L+D     +NL         AG+K+    K   +  +    L     G      
Sbjct: 24  VDTPALLVDLDAFEDNLARVHTRVLQAGLKVRSHGKAHKSPAIAHRQLAAGATGICCQKV 83

Query: 59  SLYEVMLGHEKFGGETHAYNVA---YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           S  E+               +                   I  +   Q+ +  D A +  
Sbjct: 84  SEAEI-FVEAGITDVLITNQIVGLRKVTRVAALAARARLGICVDHPIQVEQIGDAASRQG 142

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS 171
             + + I   + + +  +++ ++    L    +    S      G+          
Sbjct: 143 SHLDVLIEVDIGHQRCGISNAHQA-IDLARTIEQ--YSPHLRFAGIHAFRGSAQHM 195


>gi|330869029|gb|EGH03738.1| alanine racemase domain-containing protein [Pseudomonas syringae
           pv. aesculi str. 0893_23]
          Length = 378

 Score = 45.1 bits (105), Expect = 0.017,   Method: Composition-based stats.
 Identities = 23/171 (13%), Positives = 47/171 (27%), Gaps = 9/171 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  L+D  ++  N+    +     GV+L   +K      +    +     G T S+L
Sbjct: 8   LDTPVALLDVPRMQRNIQRMQHRMNELGVRLRPHVKTSKCLPVIQAQIAAGASGVTVSTL 67

Query: 61  YEVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
            E      +   +     A      D  +    + C   I+ ++V         A     
Sbjct: 68  KEAEHCFAEGINDVFYAVAIAPGKLDQALKLRRNGCRLSILTDSVVAAQAI--VAFGQQH 125

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
                +   +                        +     ++ G+M H   
Sbjct: 126 DEHFDVWIEIDCDGHRSGLTV--DDPALVDVARTLVEGGMHLRGVMTHAGS 174


>gi|289646519|ref|ZP_06477862.1| alanine racemase domain-containing protein [Pseudomonas syringae
           pv. aesculi str. 2250]
          Length = 378

 Score = 45.1 bits (105), Expect = 0.017,   Method: Composition-based stats.
 Identities = 23/171 (13%), Positives = 47/171 (27%), Gaps = 9/171 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  L+D  ++  N+    +     GV+L   +K      +    +     G T S+L
Sbjct: 8   LDTPVALLDVPRMQRNIQRMQHRMNELGVRLRPHVKTSKCLPVIQAQIAAGASGVTVSTL 67

Query: 61  YEVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
            E      +   +     A      D  +    + C   I+ ++V         A     
Sbjct: 68  KEAEHCFAEGINDVFYAVAIAPGKLDQALKLRRNGCRLSILTDSVVAAQAI--VAFGQQH 125

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
                +   +                        +     ++ G+M H   
Sbjct: 126 DEHFDVWIEIDCDGHRSGLTV--DDPALVDVARTLVEGGMHLRGVMTHAGS 174


>gi|312883710|ref|ZP_07743433.1| alanine racemase domain-containing protein [Vibrio caribbenthicus
           ATCC BAA-2122]
 gi|309368627|gb|EFP96156.1| alanine racemase domain-containing protein [Vibrio caribbenthicus
           ATCC BAA-2122]
          Length = 368

 Score = 45.1 bits (105), Expect = 0.017,   Method: Composition-based stats.
 Identities = 24/195 (12%), Positives = 51/195 (26%), Gaps = 16/195 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           + TP  L+D  K+  N++T      + G+ L    K   +  +          G   + L
Sbjct: 6   LDTPALLVDLDKMNQNIETMQQRINDLGLMLRPHTKAHKSPIIAQRQIDAGAKGICVAKL 65

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTI-------IFNTVSQLNKFKDKAQK 113
            E  +  E    +         + +I  +++            + +    + K    A K
Sbjct: 66  GEAEVMAEGGISDILITTPIAGEKKIQRLINLYLKYPDFRFIQVIDHHDHVAKIGQFALK 125

Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFL 173
               + L I               R    +GE   + I +               +    
Sbjct: 126 AGVCVELMIEVESG--------QQRCGVDVGEPLLELIRAIKNTQGVSYAGIQAYSGHLQ 177

Query: 174 CFSAMLKNIEKEFGH 188
                 +   +    
Sbjct: 178 HVKGYAERNHQARNA 192


>gi|332798070|ref|YP_004459569.1| alanine racemase domain-containing protein [Tepidanaerobacter sp.
           Re1]
 gi|332695805|gb|AEE90262.1| alanine racemase domain protein [Tepidanaerobacter sp. Re1]
          Length = 371

 Score = 45.1 bits (105), Expect = 0.018,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 54/210 (25%), Gaps = 13/210 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSSL 60
           ++TP  L+D   L NN+  A  +      +L   +K   +  +     +    G    +L
Sbjct: 6   LQTPAILVDLDILENNIKKAQALCDAHDKELWPMIKTHKSTEIVKMQQEAGAAGFLCGTL 65

Query: 61  YEVM-LGHEKFGGETHAY---NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
            E   L         +AY   +       I+        I  +         D A+    
Sbjct: 66  DECEGLAKAGIKNIMYAYPVASPVNIQRVIELSKKCNFIIRIDNYDGAKMLNDAAEAAGV 125

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK------ 170
           K+   I                         KD        ++    H    +K      
Sbjct: 126 KVNYTIIIDSGL--HRFGILPEKVLDFANSLKDFKALNFLGISTHPGHVYSASKQEDIPL 183

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGG 200
                   +K           +++ I+ G 
Sbjct: 184 YVKDEKNAVKTAADSLRAAGYELKLITSGS 213


>gi|320323989|gb|EFW80073.1| alanine racemase domain-containing protein [Pseudomonas syringae
           pv. glycinea str. B076]
          Length = 378

 Score = 45.1 bits (105), Expect = 0.018,   Method: Composition-based stats.
 Identities = 23/171 (13%), Positives = 48/171 (28%), Gaps = 9/171 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  L+D  ++  N+    +     GV+L   +K      +    +     G T S+L
Sbjct: 8   LDTPVALLDVPRMQRNIQRMQHRINELGVRLRPHVKTSKCLPVIQAQIAAGASGVTVSTL 67

Query: 61  YEVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
            E      +   +     A      D  +    + C   I+ ++V         A     
Sbjct: 68  KEAEHCFAEGINDVFYAVAIAPGKLDQALKLRRNGCRLSILTDSVVAAQAI--VAFGQRH 125

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
                +   +                   +    +     ++ G+M H   
Sbjct: 126 DENFDVWIEIDCDGHR--SGLTIDDPSLVEVARTLIEGGMHLRGVMTHAGS 174


>gi|71735273|ref|YP_275478.1| alanine racemase domain-containing protein [Pseudomonas syringae
           pv. phaseolicola 1448A]
 gi|71555826|gb|AAZ35037.1| Alanine racemase, N-terminal domain family [Pseudomonas syringae
           pv. phaseolicola 1448A]
          Length = 377

 Score = 45.1 bits (105), Expect = 0.018,   Method: Composition-based stats.
 Identities = 23/171 (13%), Positives = 48/171 (28%), Gaps = 9/171 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  L+D  ++  N+    +     GV+L   +K      +    +     G T S+L
Sbjct: 8   LDTPVALLDVPRMQRNIQRMQHRINELGVRLRPHVKTSKCLPVIQAQIAAGASGVTVSTL 67

Query: 61  YEVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
            E      +   +     A      D  +    + C   I+ ++V         A     
Sbjct: 68  KEAEHCFAEGINDVFYAVAIAPGKLDQALKLRRNGCRLSILTDSVVAAQAI--VAFGQRH 125

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
                +   +                   +    +     ++ G+M H   
Sbjct: 126 DENFDVWIEIDCDGHR--SGLTIDDPSLVEVARTLIEGGMHLRGVMTHAGS 174


>gi|221236140|ref|YP_002518577.1| alanine racemase [Caulobacter crescentus NA1000]
 gi|220965313|gb|ACL96669.1| alanine racemase [Caulobacter crescentus NA1000]
          Length = 402

 Score = 45.1 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 44/132 (33%), Gaps = 5/132 (3%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLY 61
           +TP  ++D+  L  NL     +   AGV+L    K      +   + +    G    ++ 
Sbjct: 16  QTPLLVVDRAALERNLARMQALCDAAGVRLRAHGKTHKCSTLGRLIIERGAVGLCCQTVG 75

Query: 62  EVMLGHEKFGGETHAY--NVAYKDCEIDAVLSNCDTI--IFNTVSQLNKFKDKAQKLHKK 117
           E          +      +  +    + A+      I  + +   Q+++  D A      
Sbjct: 76  EAEAYVAGGIQDVLVTAPSPPWGAARLAALAKTGARIGAVADDEGQIDRLSDAAVAAGVT 135

Query: 118 IGLRINPSVSYS 129
           + L ++  +   
Sbjct: 136 LDLVVDLDLGTH 147


>gi|118497341|ref|YP_898391.1| alanine racemase [Francisella tularensis subsp. novicida U112]
 gi|195536029|ref|ZP_03079036.1| alanine racemase [Francisella tularensis subsp. novicida FTE]
 gi|226711045|sp|A0Q5X2|ALR_FRATN RecName: Full=Alanine racemase
 gi|118423247|gb|ABK89637.1| alanine racemase [Francisella novicida U112]
 gi|194372506|gb|EDX27217.1| alanine racemase [Francisella tularensis subsp. novicida FTE]
          Length = 365

 Score = 44.7 bits (104), Expect = 0.021,   Method: Composition-based stats.
 Identities = 25/176 (14%), Positives = 59/176 (33%), Gaps = 12/176 (6%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTL----NQYMDGTTSSSLYEVM 64
           I  Q L NN+        +   K+   +K  A     + +    +  +D    +++ E  
Sbjct: 6   ISAQTLRNNIRIIKEYVGS--AKICFPVKANAYGHGLELIVEHSHDLVDFFAVANVLEAF 63

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
              +        +    +   ID +LS    +     + + K +  A+  +KK  + +N 
Sbjct: 64  RVLDVVEKPVMIFG-VIEYNYIDRILSKNIRVSIQDYNDIEKLEKFAKYYNKKPFVHVNL 122

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +   ++  +   +          +   ES+   + G+  H  C +      +   K
Sbjct: 123 NTGMNRMGVDYNDAC-----RTIQRAYESDWLILEGVYSHLACADNRDHPTNIKQK 173


>gi|298487772|ref|ZP_07005813.1| alanine racemase, N-terminal domain family protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298157864|gb|EFH98943.1| alanine racemase, N-terminal domain family protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
          Length = 378

 Score = 44.7 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 48/171 (28%), Gaps = 9/171 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  L+D  ++  N+    +     GV+L   +K      +    +     G T S+L
Sbjct: 8   LDTPVALLDVPRMQRNIQRMQHRMNELGVRLRPHVKTSKCLPVIQAQIAAGASGVTVSTL 67

Query: 61  YEVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
            E      +   +     A      D  +    + C   I+ ++V         A     
Sbjct: 68  KEAEHCFAEGINDVFYAVAIAPGKLDQALKLRRNGCRLSILTDSVVAAQAI--VAFGQRH 125

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
                +   +              S         +     ++ G+M H   
Sbjct: 126 DENFDVWIEIDCDGHRSGLTVDDPSLF--DVARTLIEGGMHLRGVMTHAGS 174


>gi|332977731|gb|EGK14494.1| amino acid aldolase or racemase family protein [Desmospora sp.
           8437]
          Length = 396

 Score = 44.7 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 59/174 (33%), Gaps = 15/174 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD---GTTSS 58
           +  P+  +D   L  N+       +   V++  A K   +  +   + +  +   G    
Sbjct: 16  VPKPFAFLDLDLLRENIKNIRDRSRGKNVRI--ASKSIRSVPVLRLILESGEPFRGVMCY 73

Query: 59  SLYEVM-LGHEKFGGETHAYNVAYKDCEI----DAVLSNCDTIIFNTVSQLNKFKDKAQK 113
           S  E + L  + F     AY    K+               T++ ++   +++ +   ++
Sbjct: 74  SPLEALFLAEQGFDDLLVAYPAWEKEHLRAVAARVKAGKEITLMVDSPPHVDRLEQVGRE 133

Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSR-----LGEKCKDKIESEIKNVNGLM 162
               + + ++  VS S   L                E  K   +++   ++G+M
Sbjct: 134 QEVCLPVCLDLDVSVSLPGLHFGVHRSPLSTRDSFLETAKKIRDAKHLRLDGIM 187


>gi|213583105|ref|ZP_03364931.1| arginine decarboxylase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-0664]
          Length = 206

 Score = 44.7 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 47/152 (30%), Gaps = 13/152 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYM--DG 54
           P      Q L + L +     K A           L+  +K      + ++L       G
Sbjct: 51  PALFCFPQILQHRLRSINAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLG 110

Query: 55  TTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112
             + S  E+M  L H          N  YKD E   +    + +       + K  + A 
Sbjct: 111 LEAGSKAELMAVLAHAGMTRSVIVCN-GYKDREYIRLALIGEKMGHKVYLVIEKMSEIAI 169

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLG 144
            L +   L + P +     + +  +  +   G
Sbjct: 170 VLEEAERLNVVPRLGVRARLASQGSGKWQSSG 201


>gi|150389494|ref|YP_001319543.1| alanine racemase domain-containing protein [Alkaliphilus
           metalliredigens QYMF]
 gi|149949356|gb|ABR47884.1| alanine racemase domain protein [Alkaliphilus metalliredigens QYMF]
          Length = 367

 Score = 44.7 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 17/131 (12%), Positives = 37/131 (28%), Gaps = 5/131 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           + TP  ++D  +L  N++    + K+ GV L   +K   +  +     +    G  ++ L
Sbjct: 6   LDTPCLVVDLDQLEKNIEEMGVLAKDHGVALWPMVKTHKSEYIVKKQLENGAEGVLAAKL 65

Query: 61  YEVMLGHEKFGGETH----AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
            E     E    +                +            +++       +KA     
Sbjct: 66  GEAEKMVEAGAKKVMMAYPIIGEGKLKRLVALTEKAEVFCSIDSLEVAEILNEKAITEGI 125

Query: 117 KIGLRINPSVS 127
                I     
Sbjct: 126 VFQCIILIDSG 136


>gi|134804|sp|P22220|SPE1_AVESA RecName: Full=Arginine decarboxylase; Short=ADC; Short=ARGDC
 gi|16120|emb|CAA40137.1| arginine decarboxylase [Avena sativa]
          Length = 607

 Score = 44.7 bits (104), Expect = 0.023,   Method: Composition-based stats.
 Identities = 26/257 (10%), Positives = 67/257 (26%), Gaps = 35/257 (13%)

Query: 12  QKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYMD----GTTSSS 59
             L + +++      N        +  + +  +K      +   +  +      G  + S
Sbjct: 71  DVLRHRINSLHTAFANAIKYTQYGSVYQGVFPVKVNQHKDVVQDMVHFGYDHSYGLEAGS 130

Query: 60  LYEVMLGHEKFGGETHA---YNVAYKDCEIDA------VLSNCDTIIFNTVSQLNKFKDK 110
             E+++                  YKD    A       +     I+     +L+   ++
Sbjct: 131 KPELLIAMSCLTKAKPGAYLVCNGYKDSAYVALALAARAMGLNVIIVLEMEEELDIVIEE 190

Query: 111 AQKLHKKIGLRINPSVSY-SKFILADPNRPFSRLGEKCKDK--------IESEIKNVNGL 161
           + KL  +  + +   +                + G   +            +++  +  L
Sbjct: 191 SSKLGVEPVIGVRAKLLTKIPGHFGSTAGKHGKFGLPAEKIYEVAKKLKALNKLHWLKLL 250

Query: 162 MFHNNCENKS----FLCFSAMLKNIEKEFGHFITQ-IEWISLGGGIHFTDKDYPVKDFCQ 216
            FH      +    F   S            +  + +  +  GGG+              
Sbjct: 251 HFHVGSMIPTTDIVFKAASEASDIYCALVKEYGVETMTTLDCGGGLGVDYDGTRSGSSDM 310

Query: 217 RLKEFSEKYSVQIYLEP 233
            +    E+Y+  I    
Sbjct: 311 SVAYGLEEYASSIVQAV 327



 Score = 42.8 bits (99), Expect = 0.079,   Method: Composition-based stats.
 Identities = 28/322 (8%), Positives = 63/322 (19%), Gaps = 41/322 (12%)

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA------------ 111
             G      E                          ++        KA            
Sbjct: 220 KHGKFGLPAEKIYEVAKKLKALNKLHWLKLLHFHVGSMIPTTDIVFKAASEASDIYCALV 279

Query: 112 --------QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--KNVNGL 161
                     L    GL ++   + S                     +  +     V   
Sbjct: 280 KEYGVETMTTLDCGGGLGVDYDGTRSGSSDMSVAYGLEEYASSIVQAVRLKCDYHGVPHP 339

Query: 162 MFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEF 221
           +             S ++              +  +                  +     
Sbjct: 340 VLCTESGRAMASYHSMIILEALSAIPEPKDDEDEATTEQLHGRIRDL-----SSKLQPTG 394

Query: 222 SEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQE---- 277
               S  ++++     +       +  +    +      ++ SV + +PDY   Q     
Sbjct: 395 LSMSSHAVHIKKHGIEMYKLGKKLSKSVTTDAHTIYNYHMNLSVFSLMPDYWGIQHLFPM 454

Query: 278 -SATIYPNTGPYTAMVCGRSCLAG---DIFGEFHFEKPVKIGD------RISFEDVAGYN 327
              +       + A +   +C +    D F       P+   D       ++      Y 
Sbjct: 455 MPVSRLDEKPTHKATLVDVTCDSDGKVDKFIRDTETMPLHPLDPKLGGYYVAVLLTGAYQ 514

Query: 328 INRKNWFNGINMPTIAVKNVDG 349
               N  N    P++      G
Sbjct: 515 EALSNKHNLFGGPSLVRVVGTG 536


>gi|156740573|ref|YP_001430702.1| alanine racemase domain-containing protein [Roseiflexus
           castenholzii DSM 13941]
 gi|156231901|gb|ABU56684.1| alanine racemase domain protein [Roseiflexus castenholzii DSM
           13941]
          Length = 349

 Score = 44.7 bits (104), Expect = 0.023,   Method: Composition-based stats.
 Identities = 23/213 (10%), Positives = 54/213 (25%), Gaps = 14/213 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  +ID  +L  N+          G+     +K      +    +     G T   L
Sbjct: 6   LDTPAVVIDLDRLEANIARFQAHLDRHGIANRPHIKTHKIPQIAQMQIAAGAVGITCQKL 65

Query: 61  YEVM-LGHEKFGGETHAYN---VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
            E   +           YN    A  +  +        ++  ++   +            
Sbjct: 66  GEAEVMADAGITDIFLPYNILGAAKLERLVALARRVQVSVTADSPDVVTGLGAAMSGAGL 125

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
           ++ + +         +     +  +   E       +      GLM + +          
Sbjct: 126 ELPVLVECD----TGMGRCGVQTPAEAAELAFQIARTAGLRFGGLMTYPSSPA-----IG 176

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY 209
             ++   +        +E +S GG         
Sbjct: 177 PFMREAVRLLRERGLPVERVSGGGTAGMWHAHE 209


>gi|71278090|ref|YP_271044.1| decarboxylase domain-containing protein [Colwellia psychrerythraea
           34H]
 gi|71143830|gb|AAZ24303.1| decarboxylase domain protein [Colwellia psychrerythraea 34H]
          Length = 171

 Score = 44.7 bits (104), Expect = 0.023,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 11/44 (25%)

Query: 288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK 331
               + G  C   DI  +        +GD +       Y     
Sbjct: 113 ELVNIVGPICNPLDILADKIMLPKASMGDYVVVFQSGTYVATAS 156


>gi|328676829|gb|AEB27699.1| Alanine racemase [Francisella cf. novicida Fx1]
          Length = 365

 Score = 44.7 bits (104), Expect = 0.023,   Method: Composition-based stats.
 Identities = 25/176 (14%), Positives = 59/176 (33%), Gaps = 12/176 (6%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTL----NQYMDGTTSSSLYEVM 64
           I  Q L NN+        +   K+   +K  A     + +    +  +D    +++ E  
Sbjct: 6   ISAQTLRNNIRIIKEYVGS--AKICFPVKANAYGHGLELIVEHSHDLVDFFAVANVLEAF 63

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
              +        +    +   ID +LS    +     + + K +  A+  +KK  + +N 
Sbjct: 64  RVLDVVEKPVMIFG-VIEYNYIDRILSKNIRVSIQDYNDIEKLEKFAKYYNKKPFVHVNL 122

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +   ++  +   +          +   ES+   + G+  H  C +      +   K
Sbjct: 123 NTGMNRMGVDYSDAC-----RTIQRAYESDWLILEGVYSHLACADNRDHPTNIKQK 173


>gi|323528944|ref|YP_004231096.1| alanine racemase domain-containing protein [Burkholderia sp.
           CCGE1001]
 gi|323385946|gb|ADX58036.1| alanine racemase domain protein [Burkholderia sp. CCGE1001]
          Length = 376

 Score = 44.7 bits (104), Expect = 0.023,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 39/148 (26%), Gaps = 9/148 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  LID +++  N+          GVK    +K      +    ++    G T S+L
Sbjct: 6   LNTPAALIDVERMQRNIARMQQRMNALGVKFRPHVKTTKCEQVVRAQMDAGASGITVSTL 65

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCE-----IDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E        G     Y V     +               I+ ++V+        A    
Sbjct: 66  KEAEQFFAG-GVRDIVYAVGMAPTKLPQALALRRQGCDLKIVADSVACAEAI--VAFGRE 122

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRL 143
                 +   +                L
Sbjct: 123 HDERFEVWIEIDVDGHRSGIAPEDDMLL 150


>gi|163795243|ref|ZP_02189211.1| urocanate hydratase [alpha proteobacterium BAL199]
 gi|159179641|gb|EDP64170.1| urocanate hydratase [alpha proteobacterium BAL199]
          Length = 378

 Score = 44.7 bits (104), Expect = 0.024,   Method: Composition-based stats.
 Identities = 21/174 (12%), Positives = 49/174 (28%), Gaps = 9/174 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFD-TLNQYMDGTTSSSL 60
           I TP  +ID      NLD       + G+++    K   +  +    + +   G     +
Sbjct: 16  IDTPALVIDLDAFERNLDRMAAFSHDTGIRVRPHAKTHKSPAVARQQMQRGAVGQCCQKV 75

Query: 61  YEVMLGHEKFGGETHAYNV----AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
            E  +            N                     +  +   Q+  + + A++   
Sbjct: 76  GEAEVLVHGGINNVLVSNQIVGANKVARLAALARRAWIGVCADDPIQVKAYGEAARRAQV 135

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170
           ++ + +   V  +         P +   E  K   ++      GL  ++     
Sbjct: 136 ELHVLVEIDVGAA----RCGVMPGAPAVELAKYIADTPGLVFEGLQAYHGSAQH 185


>gi|254374164|ref|ZP_04989646.1| alanine racemase [Francisella novicida GA99-3548]
 gi|151571884|gb|EDN37538.1| alanine racemase [Francisella novicida GA99-3548]
          Length = 365

 Score = 44.7 bits (104), Expect = 0.024,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 59/176 (33%), Gaps = 12/176 (6%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTL----NQYMDGTTSSSLYEVM 64
           I  Q L NN+        +   K+   +K  A     + +    +  +D    +++ E  
Sbjct: 6   ISVQTLRNNITIIKEYVGS--AKICFPVKANAYGHGLELIVEHSHDLVDFFAVANVLEAF 63

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
              +        +    +   ID +LS    I     + + K +  A+  +KK  + +N 
Sbjct: 64  RVLDVVEKPVMIFG-VIEYNYIDRILSKNIRISIQDYNDIEKLEKFAKYYNKKPFVHVNI 122

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +   ++  +   +          +   ES+   + G+  H  C +      +   K
Sbjct: 123 NTGMNRMGVDYNDAC-----RTIQQAYESDWLILEGVYSHLACADNRDHPTNIKQK 173


>gi|73662116|ref|YP_300897.1| alanine racemase [Staphylococcus saprophyticus subsp. saprophyticus
           ATCC 15305]
 gi|123643046|sp|Q49Z24|ALR_STAS1 RecName: Full=Alanine racemase
 gi|72494631|dbj|BAE17952.1| alanine racemase [Staphylococcus saprophyticus subsp. saprophyticus
           ATCC 15305]
          Length = 382

 Score = 44.7 bits (104), Expect = 0.024,   Method: Composition-based stats.
 Identities = 34/340 (10%), Positives = 89/340 (26%), Gaps = 40/340 (11%)

Query: 7   YL-IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMD-GTTSSSL 60
           Y+ +D   ++ N      +  N  V  +  +K       +  +   L          ++L
Sbjct: 10  YVNVDLNAIVANFQVFQKLHPNKTVMPV--VKANGYGLGSIKVARQLMDNGAEFFAVATL 67

Query: 61  YEV-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E   L       +     V   +    A+       + +    +   K+  +   K + 
Sbjct: 68  DEAIELRMHGIDAKILVLGVIPTEHINKAIQHRVAITVPSKSWLVEAVKEIPESNEKDLW 127

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           + +               R   +  E+ K+ IE    + + +                 +
Sbjct: 128 IHVKLDTG--------MGRLGMKTAEEYKEVIELINGHSHLIFEGVFTHFACADEPGDSM 179

Query: 180 KNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
              +  F        + ++I          KD    +  +        Y         + 
Sbjct: 180 NRQQTMFEEIVGQADKPDYIHSQNSAGALMKDTQFCNAVRVGISLYGYYPSAYVKSNVKV 239

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEA-------HVPDYLLYQESATIYPNTGPYT 289
            +  +    + ++          +   SV          V           +      ++
Sbjct: 240 HLKPSAQWISEIVQTKLLHAGESVSYGSVYTADEKTKIGVIPVGYADGYPRMM---KGFS 296

Query: 290 AMVCGRSCLAGDIFGEFHFEK-------PVKIGDRISFED 322
             V G+ C    + G+   ++        +++GD++   D
Sbjct: 297 VNVNGKQCE---VIGKVCMDQTIIKIPDEIQVGDKVIIMD 333


>gi|218288214|ref|ZP_03492513.1| alanine racemase [Alicyclobacillus acidocaldarius LAA1]
 gi|218241573|gb|EED08746.1| alanine racemase [Alicyclobacillus acidocaldarius LAA1]
          Length = 400

 Score = 44.7 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 39/338 (11%), Positives = 76/338 (22%), Gaps = 33/338 (9%)

Query: 5   PYY-LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAA----WGMFDTLNQYMDG-TTSS 58
           P + +ID   L +N+          G  L++A+K  A       + D L +        +
Sbjct: 4   PLFAVIDLGHLSHNIRYLQSRL-RPGTSLMVAVKADAYGHGVRAVVDRLAREGVRQVAVA 62

Query: 59  SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           S+ E +               A               I    +S +++     ++L   +
Sbjct: 63  SIEEALEIRAFDRDVNILVLGAVTPDACMKAAEAEVEIALTDLSPIDEIPRLPKRLRVHL 122

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK--SFLCFS 176
            L    +    K          +    +  + + +      G                  
Sbjct: 123 PLDTGMNRLGVKRTDEAVALARAIAAREDLELVGA------GTHLAAADAEDPAHAAGQM 176

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
             LK   +       +   I  G                  ++     Y          A
Sbjct: 177 ERLKAFVRALEAAGLRPPRIHAGNSAALLR---DPDWHLDMVRVGIAAYGYSPDPSVLPA 233

Query: 237 IVTNTTTL-NTTVLDISENIKNLVIVDSSVEAHVPDYL-------LYQESATIYPNTGPY 288
                       VL +++      +   +        +                 N G  
Sbjct: 234 PSLRPVMSLYAGVLRVAQAEAGETVGYGATFVVTRPMVIATVAGGYADGYPRHLSNEGEV 293

Query: 289 TA-----MVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321
                   V GR C   D          V  GD ++  
Sbjct: 294 LVRGELRPVIGRVC--MDQLMVDVTGLDVATGDVVALF 329


>gi|324503634|gb|ADY41575.1| Ornithine decarboxylase [Ascaris suum]
          Length = 344

 Score = 44.4 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 72/259 (27%), Gaps = 51/259 (19%)

Query: 143 LGEKCKDKIESEIKNVN--GLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWIS 197
           +GE  +    +    V   G+ F       S   ++  +    + F         +  + 
Sbjct: 37  MGEAPELLSMAADLGVKVVGISFSIGAGACSLGIYAYAIAQACRLFGVAASLGHDLCVLD 96

Query: 198 LGGGIHFTDKD--YPVKDFCQRLKEFSEKY-------SVQIYLEPGEAIVTNTTTLNTTV 248
           +GGG                  +    ++Y        V+I  EPG     +  +L T +
Sbjct: 97  IGGGFPCGSPTRGPSFSQVAATISASLDEYFPESSFGHVRIIAEPGRYFAASVFSLITNI 156

Query: 249 LDIS------------------ENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG---- 286
           +D                       +       S    +  +   +    +         
Sbjct: 157 IDKRAVDASVVTNDVFDSGTAGFVYQTNEGFFGSFGCRLTAFCEPKCRPLVECVHDVSAD 216

Query: 287 PYTA-MVCGRSCLAG-DIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFN-------GI 337
            YT   + G +     DI         ++IG+ + ++D+  Y++      N       G 
Sbjct: 217 NYTYATILGPTLSNNVDIVQPVARLPQMQIGEWLLWDDMGAYSMG-----NRETLGEDGQ 271

Query: 338 NMPTI-AVKNVDGTIKAIR 355
             PTI    + +      R
Sbjct: 272 PSPTIYYFVDDERWQHMSR 290


>gi|88800247|ref|ZP_01115814.1| alanine racemase [Reinekea sp. MED297]
 gi|88776962|gb|EAR08170.1| alanine racemase [Reinekea sp. MED297]
          Length = 358

 Score = 44.4 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 41/328 (12%), Positives = 90/328 (27%), Gaps = 34/328 (10%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFAAWGMFDTLNQYM---DGTTSSSLYEV 63
           LI +  L +NL    +    A +    A+ K  A     D   + +   DG   SSL E 
Sbjct: 8   LISRSALTHNLGRVRHYAPQANI---WAVIKANAYGHGADVAAEALSAADGFAVSSLDEA 64

Query: 64  MLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
           +   +          +   +        +     + ++ +Q+ + + +       + L+I
Sbjct: 65  IALRDSGVSHPILLLSGVTQADHWAEAAALGLHCVVHSRTQVEQIRTQTLPSPLSVWLKI 124

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           +  +        +    FS L         S++ NV+ +    +  +          +  
Sbjct: 125 DSGMHRLGLTPENVPAAFSAL---------SQVSNVSVIGALTHMASADVPERDNATRQQ 175

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTT 242
            + F          S+G           V D+ +         +        +  +    
Sbjct: 176 FEVFQAASPATLQTSVGNSATILRHADCVGDWVR-PGIMLYGATPTTEASAADYGLQPVM 234

Query: 243 TLNTTVLDISENIKNLVIVDSSVEAHVPDYLL----------YQESAT--IYPNTGPYTA 290
                V+ + +      +             +          Y   A        G    
Sbjct: 235 AFEAPVIAVRDIAAGESVGYGHRWQASRPARIATLAAGYGDGYPRHAPDGTPVWLGGQRV 294

Query: 291 MVCGRSCLAGDIFGEFHFE--KPVKIGD 316
            + GR   + D+         + VK+GD
Sbjct: 295 PIAGRV--SMDLITVDVSLLSEEVKVGD 320


>gi|158422863|ref|YP_001524155.1| alanine racemase [Azorhizobium caulinodans ORS 571]
 gi|158329752|dbj|BAF87237.1| alanine racemase [Azorhizobium caulinodans ORS 571]
          Length = 381

 Score = 44.4 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 2/84 (2%)

Query: 2  IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSL 60
          + TP  ++D+ ++L N+          GV L   LK   +      + +  +G  T S+L
Sbjct: 10 LPTPCLILDEARMLRNIARLKTHLDGLGVALRPHLKTLKSVEAARRVLKDGNGPATVSTL 69

Query: 61 YEVMLGHEKFGGETHAYNVAYKDC 84
           E        G     Y V     
Sbjct: 70 KEAE-VFAAAGVRDIIYAVGIAPQ 92


>gi|21325381|dbj|BAC00003.1| Hypothetical protein [Corynebacterium glutamicum ATCC 13032]
          Length = 380

 Score = 44.4 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 34/101 (33%), Gaps = 2/101 (1%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSS 59
           MI TP  LID+++L  N+           + L   +K      +          G T ++
Sbjct: 39  MIDTPAVLIDRERLTANISRMAAHAGAHEIALRPHVKTHKIIEIAQMQVDAGARGITCAT 98

Query: 60  LYEVML-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN 99
           + E  +     F     AY +   D  +  + +    I   
Sbjct: 99  IGEAEIFAGAGFTDIFIAYPLYLTDHAVQRLNAIPGEISIG 139


>gi|19553808|ref|NP_601810.1| hypothetical protein NCgl2520 [Corynebacterium glutamicum ATCC
           13032]
 gi|62391448|ref|YP_226850.1| hypothetical protein cg2890 [Corynebacterium glutamicum ATCC 13032]
 gi|41326789|emb|CAF21271.1| PUTATIVE AMINO ACID PROCESSING ENZYME [Corynebacterium glutamicum
           ATCC 13032]
          Length = 343

 Score = 44.4 bits (103), Expect = 0.026,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 34/101 (33%), Gaps = 2/101 (1%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSS 59
           MI TP  LID+++L  N+           + L   +K      +          G T ++
Sbjct: 2   MIDTPAVLIDRERLTANISRMAAHAGAHEIALRPHVKTHKIIEIAQMQVDAGARGITCAT 61

Query: 60  LYEVML-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN 99
           + E  +     F     AY +   D  +  + +    I   
Sbjct: 62  IGEAEIFAGAGFTDIFIAYPLYLTDHAVQRLNAIPGEISIG 102


>gi|291279676|ref|YP_003496511.1| arginine decarboxylase [Deferribacter desulfuricans SSM1]
 gi|290754378|dbj|BAI80755.1| arginine decarboxylase [Deferribacter desulfuricans SSM1]
          Length = 613

 Score = 44.4 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 41/347 (11%), Positives = 90/347 (25%), Gaps = 55/347 (15%)

Query: 14  LLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQY----MDGTTSSSLY 61
           L  ++++                    +  LK          L +       G  + S  
Sbjct: 54  LKKHVNSLFNKFNKYIKEYEYSGKFSSVFPLKVNQYPNFVKYLMEKTKGKNYGLEAGSKP 113

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           E+++       +       +KD E+       A +    T+    +++L    + A+++ 
Sbjct: 114 ELIIAMSYVNEKCSIVVNGFKDKEMISLGFISAKMGQNITLTIEGLNELETIVEVAKEMG 173

Query: 116 KKI---GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KNVNGLMFH 164
                 GLRI    S    I A      S+ G    + IE+            +  + FH
Sbjct: 174 PPYPNIGLRIKLHSSGIG-IWAKSGGINSKFGLTSVELIEALRILKEEGLIDYLTMIHFH 232

Query: 165 NNCENKSFLCF----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR--- 217
              +                   + +      ++ I +GGG+      +           
Sbjct: 233 IGSQISEISPVKKALREAGNIYAELYKMGAKNLKKIDIGGGLAVEYSQHKTLHSINYTLD 292

Query: 218 ------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSV 265
                       +          I++E G  +  +   L   VL++    +        +
Sbjct: 293 EYASDVVFLLKMIANNKGVPEPDIFIEAGRYVAASHAVLVVPVLELF--SQEYNEQKLCL 350

Query: 266 EAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPV 312
           + H P  +          N       +      + D          +
Sbjct: 351 KEHNPPLIEELYELYNTINEKNAVEFLH----DSLDHMESLLTLFDL 393


>gi|254467580|ref|ZP_05080989.1| threonine aldolase, low-specificity [Rhodobacterales bacterium Y4I]
 gi|206684328|gb|EDZ44812.1| threonine aldolase, low-specificity [Rhodobacterales bacterium Y4I]
          Length = 387

 Score = 44.4 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 66/214 (30%), Gaps = 18/214 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTS-- 57
           I+TP  ++D   L  N+       K  G++  +  K   +  +     +     G     
Sbjct: 27  IQTPALVLDLDALERNIKKMGDYAKAHGMRHRVHGKMHKSVDVAKLQEELGGAVGVCCQK 86

Query: 58  SSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA------ 111
            S  EV     + G +    +   +D +    L+    +   T+  ++   + A      
Sbjct: 87  VSEAEV---FARGGIKDILVSNQVRDPQKIDRLARLPKLGARTIVCVDDIDNVADLSAAA 143

Query: 112 --QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN 169
                  ++ + I+           +     ++     ++   S I+   G M H +   
Sbjct: 144 QKHGTELEVFVEIDCGAGRCGVTTTEAVVEIAKAVNAAENLKFSGIQAYQGAMQHMDSYE 203

Query: 170 KS---FLCFSAMLKNIEKEFGHFITQIEWISLGG 200
                     A + +  +       + E +S GG
Sbjct: 204 DRKAKLDIAIAQVADAVEGLKAEGIECELVSGGG 237


>gi|254448149|ref|ZP_05061612.1| alanine racemase [gamma proteobacterium HTCC5015]
 gi|198262275|gb|EDY86557.1| alanine racemase [gamma proteobacterium HTCC5015]
          Length = 323

 Score = 44.4 bits (103), Expect = 0.029,   Method: Composition-based stats.
 Identities = 36/309 (11%), Positives = 83/309 (26%), Gaps = 20/309 (6%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWG-MFDTLN--QYMDGTTSSSLYEVML 65
           ID + + +N+  A      +  ++L A+K  A    +   L+  + +D    +S+ E + 
Sbjct: 9   IDLEAIRHNVKVAKRAAPQS--RVLAAVKADAYGHGLTRVLSAFEEVDALAVASVEEAVA 66

Query: 66  GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPS 125
                  +        +   +     +    +F    Q  +    ++   +   L +   
Sbjct: 67  LRAVSDKDIVVLQGIRQPEHLALCTKHALQPVF---HQSQQLDWLSRWSSQDSMLSVWLK 123

Query: 126 VSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKE 185
           V      L        R   +  D   + +  V  +      +++S       LK  E+ 
Sbjct: 124 VDSGMHRLGFDLDAVERAFVRLSD--HAAVNRVACMTHMACADDRSDDYTLQQLKAFERV 181

Query: 186 FGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK---EFSEKYSVQIYLEPGEAIVTNTT 242
                      +    + +    Y        L     F    +    L+P   +     
Sbjct: 182 TADLSAPRSAANSACVLGWPQAHYDWVRPGIMLYGASPFIGDTAQDWGLQPAMRLTAPIV 241

Query: 243 TLNTT-----VLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSC 297
            +        V      +    +    V     D      +         +T  + GR  
Sbjct: 242 AIKHCRKGDAVGYGRSWVCPKPMTLGVVAIGYGDGYPRHANNQTPAWVKGHTTHLVGRV- 300

Query: 298 LAGDIFGEF 306
            + D+    
Sbjct: 301 -SMDMIAID 308


>gi|301167975|emb|CBW27561.1| alanine racemase [Bacteriovorax marinus SJ]
          Length = 375

 Score = 44.4 bits (103), Expect = 0.030,   Method: Composition-based stats.
 Identities = 43/332 (12%), Positives = 99/332 (29%), Gaps = 28/332 (8%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWG-MFDTLN----QYMDG-TTSSSLYE 62
           I  +KL NN      I      K++  +K  A    +   +     +        +SL E
Sbjct: 9   ISFEKLENNYKKLKEIC--VDNKIIFMVKANAYGHGVIPIVRHSVEKLGITEFGCASLGE 66

Query: 63  VMLGHEKFGG---ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            +L  E+      E + ++    +    A +     II    ++ +       +  +   
Sbjct: 67  ALLLREELYDLEFEIYVFSDVQVELRECAEIYLNRRIIPVISNRDDLDFILNSREFENFP 126

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKC--KDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
           L I  +   ++  L            +   +  I   + +++          ++ + F  
Sbjct: 127 LFIKFNTGMNRLGLEMDKVDEVIRSIRVSGRKSIYHLMTHLSSSSLPIKKNKRNIIQFE- 185

Query: 178 MLKNIEKEFGHFITQIEWISL--------GGGIH--FTDKDYPVKDFCQRLKEFSEKYSV 227
             + I+K F     ++E  S+        G G+          +      L ++S+    
Sbjct: 186 NFEKIKKAFSDAGIEVERTSIANSGAIEQGAGLGETHVRPGLMMYGPSSMLPQYSDLSLW 245

Query: 228 --QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285
             +I  +    +++         +             + V     D    +   T   + 
Sbjct: 246 SGEIISKLETYVISIFDVEKGQPVGYGATPCPSKGKVAIVALGYGDGFTTRYIGTHLYHK 305

Query: 286 GPYTAMVCGRSC-LAGDIFGEFHFEKPVKIGD 316
                 V GR       +F + +    +K+GD
Sbjct: 306 -DIKGKVVGRVNMDMAQVFFDENSLPDLKVGD 336


>gi|34556973|ref|NP_906788.1| arginine decarboxylase [Wolinella succinogenes DSM 1740]
 gi|34482688|emb|CAE09688.1| ARGININE DECARBOXYLASE (SPEA) [Wolinella succinogenes]
          Length = 615

 Score = 44.4 bits (103), Expect = 0.031,   Method: Composition-based stats.
 Identities = 45/300 (15%), Positives = 90/300 (30%), Gaps = 49/300 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  L     +   +D      + +          K +  LK          L +      
Sbjct: 46  PLLLRFPHLIKKQVDKIFTHFETSIKQYHYKGQFKAVFPLKVNQFPNFVLPLVELSQNRC 105

Query: 54  -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEID------AVLSNCDTIIFNTVSQLNK 106
            G  + S  E+++        +      +KD E+       A + +  T+    +++L  
Sbjct: 106 YGLEAGSKAELIIAMAYTNKGSPITVNGFKDKEMISLGFIAANMGHEITLTIEGLNELET 165

Query: 107 FKDKAQ---KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI--------ESEI 155
             + A+   K    IGLRI    S    I A      S+ G    + +           I
Sbjct: 166 IIEVAEEMGKPCPNIGLRIRLHSSGIG-IWAKSGGINSKFGLTSTELLEGIRLLEKHKLI 224

Query: 156 KNVNGLMFHNNCENKSFLCFSAMLKN---IEKEFGHFI-TQIEWISLGGGIHFTDKDY-- 209
           +    + FH   +          ++    I  E        ++ +++GGG+      +  
Sbjct: 225 EKFTMIHFHIGSQISDISPLKKAMREAGNIYAELRKMGAKNLKSVNIGGGLAVEYTQHEG 284

Query: 210 -------------PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                         V    + + +  ++    IY+E G  I  +   L   VL++     
Sbjct: 285 SPNRNYTLDEFAGDVVFSLKEIAKNKKEPEPDIYIESGRYIAASHALLVAPVLELFSQEY 344


>gi|332184182|gb|AEE26436.1| Alanine racemase [Francisella cf. novicida 3523]
          Length = 365

 Score = 44.0 bits (102), Expect = 0.035,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 62/187 (33%), Gaps = 12/187 (6%)

Query: 12  QKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTL----NQYMDGTTSSSLYEVMLGH 67
           Q L NN+           V++   +K  A     + +    +  +D    +++ E     
Sbjct: 9   QTLRNNIKLIKEYVG--NVRICFPVKANAYGHGLELIVQHSHDLVDFFAVANVLEAFRVL 66

Query: 68  EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVS 127
           +        +    +   ID +LS    +     + + K +  A+  +KK  + +N +  
Sbjct: 67  DVVQKPVMIFG-VIEYNYIDRILSKNIRVSIQDYNDIEKLEKFAKYYNKKPFVHVNINTG 125

Query: 128 YSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG 187
            ++  +   +          +   ES+   + G+  H  C +      +   KN      
Sbjct: 126 MNRMGVDYNDAC-----RTIQKAFESDWLILEGVYSHLACADNRDHPTNIKQKNRFDSIV 180

Query: 188 HFITQIE 194
            F  ++ 
Sbjct: 181 EFTKELS 187


>gi|254469935|ref|ZP_05083340.1| alanine racemase, N-terminal domain protein [Pseudovibrio sp.
           JE062]
 gi|211961770|gb|EEA96965.1| alanine racemase, N-terminal domain protein [Pseudovibrio sp.
           JE062]
          Length = 375

 Score = 44.0 bits (102), Expect = 0.036,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 44/134 (32%), Gaps = 4/134 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSSL 60
           ++TP  L+D+  +  N+       K  GV L   LK   +  +   L  +  D  T S+L
Sbjct: 5   LQTPCLLLDEAAMNRNIKGMADRFKQIGVPLRPHLKTAKSIDVARILQDHGADRWTVSTL 64

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVS--QLNKFKDKAQKLHKKI 118
            E       FG +   Y V+    +++ ++         ++           +       
Sbjct: 65  KEAEY-FSSFGLKDILYAVSIVPQKMERIMQLNRAGAQMSICLDSTEMATHLSTMTLDGP 123

Query: 119 GLRINPSVSYSKFI 132
             R+   V      
Sbjct: 124 KPRVYLEVDVDGHR 137


>gi|153865083|ref|ZP_01997738.1| hypothetical protein BGS_0150 [Beggiatoa sp. SS]
 gi|152145421|gb|EDN72261.1| hypothetical protein BGS_0150 [Beggiatoa sp. SS]
          Length = 86

 Score = 44.0 bits (102), Expect = 0.036,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 20/79 (25%), Gaps = 1/79 (1%)

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRK-NWFNGINMPTIAVK 345
                + G  C    +           I D IS         +    +F    MP   + 
Sbjct: 2   ENPITLGGPLCTRMQVSTTKGELPEANINDIISIYYSCADGFSANLFYFLTAPMPAEDIV 61

Query: 346 NVDGTIKAIREFSYNDYYN 364
                  A R  +  D+ +
Sbjct: 62  QNGQHFVARRRGTKEDFLS 80


>gi|257484843|ref|ZP_05638884.1| alanine racemase domain-containing protein [Pseudomonas syringae
           pv. tabaci ATCC 11528]
          Length = 221

 Score = 44.0 bits (102), Expect = 0.037,   Method: Composition-based stats.
 Identities = 23/171 (13%), Positives = 49/171 (28%), Gaps = 9/171 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  L+D  ++  N+    +     GV+L   +K      +    +     G T S+L
Sbjct: 10  LDTPVALLDVPRMQRNIQRMQHRINELGVRLRPHVKTSKCLPVIQAQIAAGASGVTVSTL 69

Query: 61  YEVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
            E      +   +     A      D  +    + C   I+ ++V+        A     
Sbjct: 70  KEAEHCFAEGINDVFYAVAIAPGKLDQALKLRRNGCRLSILTDSVAAAQSI--VAFGQRH 127

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
                +   +                   +    +     ++ G+M H   
Sbjct: 128 DENFDVWIEIDCDGHRSGLTV--DDPSLVEVARTLIEGGMHLRGVMTHAGS 176


>gi|225686513|ref|YP_002734485.1| alanine racemase domain-containing protein [Brucella melitensis
           ATCC 23457]
 gi|256262349|ref|ZP_05464881.1| alanine racemase domain-containing protein [Brucella melitensis bv.
           2 str. 63/9]
 gi|225642618|gb|ACO02531.1| alanine racemase domain protein [Brucella melitensis ATCC 23457]
 gi|263092078|gb|EEZ16375.1| alanine racemase domain-containing protein [Brucella melitensis bv.
           2 str. 63/9]
 gi|326410894|gb|ADZ67958.1| alanine racemase domain-containing protein [Brucella melitensis
           M28]
 gi|326554185|gb|ADZ88824.1| alanine racemase domain-containing protein [Brucella melitensis
           M5-90]
          Length = 355

 Score = 44.0 bits (102), Expect = 0.037,   Method: Composition-based stats.
 Identities = 52/324 (16%), Positives = 88/324 (27%), Gaps = 15/324 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           + TP  L+D  +++ N++ A      AGVKL   +K            +    G T   L
Sbjct: 11  VDTPAILVDVDRVVANIEKAQVHADAAGVKLRPHIKTHKLPFFARMQVKAGAVGITCQKL 70

Query: 61  YEVM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E   +           YN+   +        +    I  TV         AQ    +  
Sbjct: 71  GEAEVMADAGLTDIFLPYNILGLEKLDRLHALHRRITISVTVDNKTSLAGLAQHFMNEKR 130

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
                    +         P           I  +   +                    L
Sbjct: 131 PLKVLVECDTGMGRCGVQTPGQARELAH---IIEKSAGLCFGGLMTYPATGRGDEAERWL 187

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
           +             E IS GG         P +      +  +  Y  +  +  G A + 
Sbjct: 188 REARDLLAADGIACETISSGGT--PDMWRIPAETVVTEYRPGTYIYFDRYQVAEGAATIN 245

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLA 299
           +        + +S       I+D+  +A   D L   +   +        A V G S   
Sbjct: 246 DCALTVLATV-VSHPTPERAIIDAGSKALSSDTLGLADFGELMDRP---LARVTGLSEEH 301

Query: 300 GDIFGEFHFEKPVKIGDRI-SFED 322
           G + G+      + IGDR+    D
Sbjct: 302 GKVTGDV---ANLNIGDRVRVIPD 322


>gi|257452886|ref|ZP_05618185.1| alanine racemase, biosynthetic [Fusobacterium sp. 3_1_5R]
 gi|257466749|ref|ZP_05631060.1| alanine racemase, biosynthetic [Fusobacterium gonidiaformans ATCC
           25563]
 gi|315917898|ref|ZP_07914138.1| alanine racemase [Fusobacterium gonidiaformans ATCC 25563]
 gi|317059428|ref|ZP_07923913.1| alanine racemase [Fusobacterium sp. 3_1_5R]
 gi|313685104|gb|EFS21939.1| alanine racemase [Fusobacterium sp. 3_1_5R]
 gi|313691773|gb|EFS28608.1| alanine racemase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 354

 Score = 44.0 bits (102), Expect = 0.038,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 45/159 (28%), Gaps = 19/159 (11%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAA----WGMFDTLNQYMDG-TTSSSLYEV 63
           ID + L +N+       +  GV  +  +K  A       +   L +        +SL E 
Sbjct: 7   IDTENLRHNIREIQKRAEGFGVWGV--IKANAYGLGVLPVAKILAEEGIHYFAVASLEEA 64

Query: 64  MLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                    GE       + D EI    S    I  +   +L      A K    + +  
Sbjct: 65  KEVRNANITGEILILGSLFHD-EILEAESLDFHINVSCREELEWIAKNAPKTKIHLKIDT 123

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL 161
                              + G +  +  +    N+ G+
Sbjct: 124 ----------GMTRLGFSYQEGMEVIEFAKKLSLNITGV 152


>gi|115401094|ref|XP_001216135.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114190076|gb|EAU31776.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 367

 Score = 44.0 bits (102), Expect = 0.039,   Method: Composition-based stats.
 Identities = 24/212 (11%), Positives = 55/212 (25%), Gaps = 13/212 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           + TP  ++D   +  N+   +      G+ +   LK   +  +   L +    G   + +
Sbjct: 13  LDTPSMIVDLDLMEANIKKLMDKLLPTGLSIRPHLKTTKSAILAGKLAKAGAKGGCVAKI 72

Query: 61  YEVML-GHEKFGGETHAYNVAYKDCEID----AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E      + F        +                    I+ ++    +   D   +  
Sbjct: 73  SEAEAIAAQGFDDLLITCEIVGPAKVQRLVELYRKHRKIRIVVDSEVAASAINDALARSG 132

Query: 116 KKIGLRINPSVSYSKFILADPNR-PFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174
               +     +             P   L          ++  V G   H    +     
Sbjct: 133 IDEPIATLIDLDVGLHRTGVKPGEPALALARHVGGLKHLKLIGVQGYEGHLQHLHDYNDR 192

Query: 175 FSAMLKNI------EKEFGHFITQIEWISLGG 200
            +  L+++         F      IE ++ GG
Sbjct: 193 KTQCLESMRTLTSTADAFRKAGFNIEVVTTGG 224


>gi|295688285|ref|YP_003591978.1| alanine racemase domain-containing protein [Caulobacter segnis
          ATCC 21756]
 gi|295430188|gb|ADG09360.1| alanine racemase domain protein [Caulobacter segnis ATCC 21756]
          Length = 401

 Score = 44.0 bits (102), Expect = 0.040,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 25/86 (29%), Gaps = 1/86 (1%)

Query: 3  KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLY 61
          +TP  ++D+  L  N+D    +   AGV+L    K      +   +      G    ++ 
Sbjct: 11 QTPLLVVDRAALERNIDRMQALCDAAGVRLRAHGKTHKCSTLGRLIVARGAVGLCCQTVG 70

Query: 62 EVMLGHEKFGGETHAYNVAYKDCEID 87
          E          +              
Sbjct: 71 EAEAYVAGGIKDVLVTAPVPAWGPPR 96


>gi|299065741|emb|CBJ36917.1| conserved protein of unknown function, Alanine racemase domain
           protein [Ralstonia solanacearum CMR15]
          Length = 376

 Score = 44.0 bits (102), Expect = 0.041,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 79/322 (24%), Gaps = 31/322 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           I TP  LID  ++  N++         GV+    +K      +    L     G T S+L
Sbjct: 6   INTPAALIDVARMTRNIERMQQRLDALGVRFRPHVKTTKCEPVVRAQLAAGAQGITVSTL 65

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCE-----IDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E        G     Y V     +               I+ ++V+        A    
Sbjct: 66  KEAEQFFAA-GIRDIVYAVGMAPAKLPQALALRRRGCDLKIVADSVTCAQAI--AAFGGE 122

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC- 174
                 +   V            P           +      + G++ H     +     
Sbjct: 123 HGEAFDVWIEVDVDGHR--SGIAPDDDRLIAVGRVLAEGGMRLGGVLAHAGSSYEYHAHD 180

Query: 175 --------FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226
                     +      +         E +S+G           +    +        + 
Sbjct: 181 ALVRIAELERSGCVRAAERLRAAGWPCETVSIG-STPTALSAEHLDGVTEVRAGVYVMFD 239

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286
           + ++     A+     ++ TTV+   E+              + D      S        
Sbjct: 240 LVMHNVGVCALSDIALSVLTTVIGHQEDKGWA----------IVDAGWMAMSRDRGTQKQ 289

Query: 287 PYTAMVCGRSCLAGDIFGEFHF 308
           P+           G++ GE+  
Sbjct: 290 PHDFGYGLVCSEHGEVLGEYLM 311


>gi|212702875|ref|ZP_03311003.1| hypothetical protein DESPIG_00908 [Desulfovibrio piger ATCC 29098]
 gi|212673737|gb|EEB34220.1| hypothetical protein DESPIG_00908 [Desulfovibrio piger ATCC 29098]
          Length = 371

 Score = 44.0 bits (102), Expect = 0.041,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 52/170 (30%), Gaps = 11/170 (6%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSLYE 62
           TP  L++ +KL  N+D         GV L   LK      +     +   G  T S+L E
Sbjct: 9   TPCLLLEDEKLQANMDRLARRLHERGVSLRPHLKTCKNIEIARRCMESPTGPATVSTLAE 68

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT-----IIFNTVSQLNKFKDKAQKLHKK 117
                   G     Y V     +++ V+          ++ +         + A++   +
Sbjct: 69  AEY-FAAGGVRDICYAVGIAPNKLERVVELRRRGIDLSVVLDNEESARLLVNFARQRDCR 127

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
           + + +               RP           +    + V G++ H   
Sbjct: 128 LAVLLEIDCDGH----RAGLRPDDPRLTAIAALLRDGGQEVRGVLTHAGS 173


>gi|227548088|ref|ZP_03978137.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227079814|gb|EEI17777.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 229

 Score = 44.0 bits (102), Expect = 0.041,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 41/108 (37%), Gaps = 7/108 (6%)

Query: 228 QIYLEPGEAIVTNTTTLNTTVLDISENIKNL-----VIVDSSVEAHVPDYLLYQESATIY 282
           +++LEPG +++     +   V  +      L      +  +       DYL+        
Sbjct: 92  RLHLEPGRSLLDGCGVILAQVAFVKTRSDGLPLVGLHMNRTQCRTTSDDYLVDPILVKRT 151

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFH--FEKPVKIGDRISFEDVAGYNI 328
           P +    A + G  C+  ++       F + V  GD I+  + AGY +
Sbjct: 152 PASEEIEAFLVGAYCIEDEVILRRRIRFPQGVSAGDIIAIPNTAGYFM 199


>gi|254373953|ref|ZP_04989435.1| conserved hypothetical protein [Francisella novicida GA99-3548]
 gi|151571673|gb|EDN37327.1| conserved hypothetical protein [Francisella novicida GA99-3548]
          Length = 520

 Score = 44.0 bits (102), Expect = 0.041,   Method: Composition-based stats.
 Identities = 30/259 (11%), Positives = 70/259 (27%), Gaps = 30/259 (11%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMDG-- 54
           P  L  +  L N +D      + A           L   +K      +   +  Y     
Sbjct: 23  PLVLYFEHILKNKIDKLYNSFEKAISNLGYTGKYSLAYPIKVNPEQKIIKAIYDYHQHNQ 82

Query: 55  ----TTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK 110
                   +  E++                +KD     +      I +  +  +    + 
Sbjct: 83  VSLDYEVGTKSELLAVLSTAAKTQKIICNGFKDLSFYKIAQLAAKIGYKIIIVIENISEI 142

Query: 111 AQK---LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-----VNGLM 162
                 L   + ++ +  +    F      + F     +  + I     N     +  L 
Sbjct: 143 NIIQDLLDNNVNIKFDFGIRTKPFDNCIHTQKFGLSLSQINECINFLKTNQLQQKLLLLH 202

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTD-----KDYPVKDF 214
            H   + KS     A ++ + + +         +E+I  GGG+           Y    +
Sbjct: 203 SHIGSQLKSTDKVVANIQRLMRIYSELKSDFVNLEYIDFGGGLAVNYDEYDRPSYDFDSY 262

Query: 215 CQRLKEFSEKYSVQIYLEP 233
            + + +  + Y+     + 
Sbjct: 263 AKTIIKNCKYYAEYYNCDM 281


>gi|157164932|ref|YP_001467250.1| putative GlnD family protein [Campylobacter concisus 13826]
 gi|112801837|gb|EAT99181.1| metal-activated pyridoxal enzyme [Campylobacter concisus 13826]
          Length = 368

 Score = 44.0 bits (102), Expect = 0.042,   Method: Composition-based stats.
 Identities = 25/209 (11%), Positives = 50/209 (23%), Gaps = 14/209 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           I TP  LIDK  +L NL+          V L    K            +    G T + +
Sbjct: 6   IDTPALLIDKDIVLKNLEKMQKYADKFNVSLRPHTKTHKMPYFAKLQVKCGAKGITVAKV 65

Query: 61  YEVM-LGHEK----FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E   +  E     F          +             +   + V  L    +   +  
Sbjct: 66  GEAEVMAKEGLSDIFIANEIVTRQKFARIIALVRSGVKVSFGVDNVGVLRLIDEVFGEAG 125

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175
           +   L +   V          NR         +  + +  +  N         +      
Sbjct: 126 EIARLLVEIEVGE--------NRSGVIEEGDFRALMGAFKECKNVEFCGVFSHDGHSYKA 177

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHF 204
               +  +         +++  +     +
Sbjct: 178 KDKRECEQIFRVATDRTLKFADIAREFGY 206


>gi|326381918|ref|ZP_08203611.1| hypothetical protein SCNU_03202 [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326199344|gb|EGD56525.1| hypothetical protein SCNU_03202 [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 354

 Score = 44.0 bits (102), Expect = 0.042,   Method: Composition-based stats.
 Identities = 16/133 (12%), Positives = 41/133 (30%), Gaps = 6/133 (4%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSS 59
           M  TP+  +D  +L  NL       +  G++L    K      +     +    G + ++
Sbjct: 1   MPDTPFLFVDVDRLDRNLTAMADWAERHGIRLRPHAKTHKCAEIARRQLEAGAVGLSVAT 60

Query: 60  LYEVML-GHEKFGGETHAY----NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114
           + E  +           AY    +                 +  ++V+ + +  D     
Sbjct: 61  IGEAEIFAELGVDDLFIAYPLWLSENKARRLRALAGRVQLAVGADSVAGVRRLADAIGDT 120

Query: 115 HKKIGLRINPSVS 127
              + + ++  + 
Sbjct: 121 TATVLIEVDSGMH 133


>gi|257453160|ref|ZP_05618459.1| Serine racemase [Fusobacterium sp. 3_1_5R]
 gi|317059695|ref|ZP_07924180.1| serine racemase [Fusobacterium sp. 3_1_5R]
 gi|313685371|gb|EFS22206.1| serine racemase [Fusobacterium sp. 3_1_5R]
          Length = 369

 Score = 44.0 bits (102), Expect = 0.042,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 63/211 (29%), Gaps = 15/211 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           +KTP  L++   L +N+     +    G +L   +K   + G+ +   +    G    +L
Sbjct: 6   LKTPTILLNIGVLKDNIHRYQKLCNQYGKELWPMIKTHKSKGILEIQIEEGASGALCGTL 65

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSN-----CDTIIFNTVSQLNKFKDKAQKLH 115
            E  +  +K G +   Y       E    +          I  +      K  + A K  
Sbjct: 66  EEAEMC-QKMGVKKIMYAYPVSTKENIQRVIELASKSYFIIRLDNEEGAKKINEMAIKED 124

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN------ 169
             I   I       +F ++  N       EK K     +   ++    H           
Sbjct: 125 VIINYTIIVDSGLHRFGVSVDNILG--FAEKLKQFQNLKFVGISSHPGHVYSSTCSKDIE 182

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGG 200
           K        L   +         I++++ G 
Sbjct: 183 KYVEDECDTLHKAKSILEEAGYSIKYVTTGS 213


>gi|120603560|ref|YP_967960.1| arginine decarboxylase [Desulfovibrio vulgaris DP4]
 gi|120563789|gb|ABM29533.1| arginine decarboxylase [Desulfovibrio vulgaris DP4]
 gi|311232696|gb|ADP85550.1| arginine decarboxylase [Desulfovibrio vulgaris RCH1]
          Length = 639

 Score = 44.0 bits (102), Expect = 0.042,   Method: Composition-based stats.
 Identities = 37/289 (12%), Positives = 80/289 (27%), Gaps = 48/289 (16%)

Query: 11  KQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD----GTTSS 58
           +  L + + +     +NA          + +  +K      + + + Q+      G    
Sbjct: 73  ENILDSQITSLHTSFRNAIGSLGYKGEYRGIFPIKVNQQQQVVEKIAQFGSHYHHGLEVG 132

Query: 59  SLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLNKFKDKA 111
           S  E++    +    E       YKD E   +  +          +     +L+   ++ 
Sbjct: 133 SKAELIAAVSQLRDREACLVCNGYKDEEFIDLGLHAVRLGFMCIFVLEMPGELDLILERG 192

Query: 112 QKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLM 162
           + L  K  + +   +S        D     S  G      ++   +            L 
Sbjct: 193 EALGVKPIIGVRAKLSVKAGGHWTDSGGERSTFGLTTSQIVDVVDRLKEKGMLDCFKLLH 252

Query: 163 FHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------------ 207
           +H   +    +           I          + ++ LGGG+                 
Sbjct: 253 YHLGSQVPNIRDIRAAVMEACRIYAGLVQEGAAMGFLDLGGGLAVDYDGSHTNFVSSRNY 312

Query: 208 --DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDI 251
             D    D  + +    ++       I  E G A V   + L   +LD+
Sbjct: 313 TLDEYCADIVEAVMTTLDEQNIPHPHIVTESGRATVAYYSMLLFNILDV 361


>gi|312961902|ref|ZP_07776399.1| alanine racemase [Pseudomonas fluorescens WH6]
 gi|311283712|gb|EFQ62296.1| alanine racemase [Pseudomonas fluorescens WH6]
          Length = 378

 Score = 43.6 bits (101), Expect = 0.044,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 53/171 (30%), Gaps = 9/171 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  LID  ++  N+        + GV+L   +K      +    +     G T S+L
Sbjct: 8   LDTPAALIDIPRMQRNIQRMQQRLNDLGVRLRPHIKTSKCLPVIHAQIAAGASGVTVSTL 67

Query: 61  YEVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
            E          +     A         +      C+  ++ ++V+        AQ+  +
Sbjct: 68  KEAQHCFAAGIRDVFYAVAIAPGKLPQALALRRQGCNLSLLTDSVAGAEAIVAFAQQQDE 127

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
           +  + I                  +    +    + +   ++ G+M H   
Sbjct: 128 RFDMWIEIDCDGH----RSGLAADAPALLEVAQSLSNGGMHLRGVMTHAGS 174


>gi|330899492|gb|EGH30911.1| alanine racemase [Pseudomonas syringae pv. japonica str. M301072PT]
 gi|330940623|gb|EGH43657.1| alanine racemase [Pseudomonas syringae pv. pisi str. 1704B]
 gi|330976056|gb|EGH76122.1| alanine racemase [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 378

 Score = 43.6 bits (101), Expect = 0.044,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 40/136 (29%), Gaps = 7/136 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  L+D  ++ +N+          GV+L   +K      +    +     G T S+L
Sbjct: 8   LDTPVALLDVSRMQHNIQRMQQRMNELGVRLRPHVKTSKCLPVIQAQIAAGASGVTVSTL 67

Query: 61  YEVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
            E      +   +     A      +  +      C   I+ ++V+        A     
Sbjct: 68  KEAEHCFAEGIDDVFYAVAIAPGKLEQALRLRRKGCRLSILTDSVTAARAI--VAFGQAH 125

Query: 117 KIGLRINPSVSYSKFI 132
                +   +      
Sbjct: 126 DERFDVWIEIDCDGHR 141


>gi|116691668|ref|YP_837201.1| alanine racemase domain-containing protein [Burkholderia
           cenocepacia HI2424]
 gi|116649668|gb|ABK10308.1| alanine racemase domain protein [Burkholderia cenocepacia HI2424]
          Length = 375

 Score = 43.6 bits (101), Expect = 0.044,   Method: Composition-based stats.
 Identities = 37/313 (11%), Positives = 80/313 (25%), Gaps = 13/313 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  LID  ++  N+          GV+    +K      + D  +     G T S+L
Sbjct: 6   LNTPAALIDIDRMQRNIARMQTHLDALGVRFRPHVKTTKCRHVVDAQIAAGAQGITVSTL 65

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDA-----VLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E        G     Y V     ++              I+ +++   +     A    
Sbjct: 66  KEAEQFFAH-GIRDIVYAVGMVPAKLGQALALRRQGCDLKIVADSLPAAHAI--AAFGRE 122

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175
                 +   V         P  P + L       +      + G++ H     +     
Sbjct: 123 HGERFDVWIEVDVDGHRSGIP--PDADLLIDVGRALTDGGMLLGGVLAHAGSSYEYDAPE 180

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
           +      ++            + G                    +   +    +Y+   +
Sbjct: 181 ALAAIAEQERSRTVRAAERLRTAGLPCPVVSIGSTPTALAAERLDGVTEVRAGVYVMF-D 239

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGR 295
            ++ N      + + +S     +   +    A + D      S                 
Sbjct: 240 LVMHNVGVCELSDIALSVLTTVIGHQEEKGWA-IVDAGWMAMSRDRGTQRQARDFGYGQV 298

Query: 296 SCLAGDIFGEFHF 308
              AGD+ G++  
Sbjct: 299 CTEAGDVLGDYLL 311


>gi|90418439|ref|ZP_01226351.1| putative alanine racemase [Aurantimonas manganoxydans SI85-9A1]
 gi|90338111|gb|EAS51762.1| putative alanine racemase [Aurantimonas manganoxydans SI85-9A1]
          Length = 368

 Score = 43.6 bits (101), Expect = 0.045,   Method: Composition-based stats.
 Identities = 20/177 (11%), Positives = 44/177 (24%), Gaps = 10/177 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL- 60
           + TP  L+D   L +NLD       +AG++L    K   +  +     Q           
Sbjct: 16  VDTPALLVDLDALEHNLDRMAAFAASAGIRLRPHAKTHKSPVIAHWQAQRGAVGQCVQKV 75

Query: 61  YEVM-LGHEKFGGETHAY---NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
            E   L               +                 +  +    +   +  A+    
Sbjct: 76  GEAEILAWAGVPDILITNEIVSPRKLARVAALSKMTNIALCADDAGVVALIEAAAEAASC 135

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFL 173
           ++ + +   V                      ++I S    + G +   +   +   
Sbjct: 136 RLTVLVEIHVGA-----NRAGVGSPAAAIALAERIASSHTLIFGGLQAYHGGAQHLR 187


>gi|332654151|ref|ZP_08419895.1| alanine racemase [Ruminococcaceae bacterium D16]
 gi|332517237|gb|EGJ46842.1| alanine racemase [Ruminococcaceae bacterium D16]
          Length = 372

 Score = 43.6 bits (101), Expect = 0.045,   Method: Composition-based stats.
 Identities = 32/329 (9%), Positives = 65/329 (19%), Gaps = 25/329 (7%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYM----DGTTSSSL 60
           ID   L +N          AG + L   K  A    A  +   L Q              
Sbjct: 12  IDLSALEHNYRALR-AMLPAGCRFLGVCKANAYGHGAVPVAQKLEQLGADMLAVACVDEA 70

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+                         +L    T     ++      D A    K + +
Sbjct: 71  RELRQAGITLP---ILCLGNTPVELAPMLLEYQVTQAVGDLATGQALSDAAVAAGKTLTI 127

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
            +      S+          +R   +       + + +       +   +  +       
Sbjct: 128 HVKLDTGMSRLGFLWQGEQTAREIARLCALPGLKAEGMFTHFADADSSEEYTMGQLTKFL 187

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
           +            +    G      +      D  +        Y            +  
Sbjct: 188 DARAALEKLGVTFKICHCGASGAVLNYPCTHIDMVRPGIALYGYYPAPEMEGLDGPGLRP 247

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVP-------DYLLYQESA-----TIYPNTGPY 288
             T+ + +  + E      +                                +       
Sbjct: 248 VMTVKSRIAAVRELPAGTCVSYGRTAVLKRDSKLAVVPIGYGDGYPRSLSNRMVMEIHGV 307

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDR 317
              + GR C+      +      VK GD 
Sbjct: 308 LCPIVGRVCMDM-CMVDVTDLPDVKPGDI 335


>gi|160941522|ref|ZP_02088855.1| hypothetical protein CLOBOL_06421 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435548|gb|EDP13315.1| hypothetical protein CLOBOL_06421 [Clostridium bolteae ATCC
           BAA-613]
          Length = 394

 Score = 43.6 bits (101), Expect = 0.046,   Method: Composition-based stats.
 Identities = 34/329 (10%), Positives = 83/329 (25%), Gaps = 26/329 (7%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF--------AAWGMFDTLNQYMDGTTSSSL 60
           +D  ++  N+          G ++   +K           A  + +     +   T S  
Sbjct: 20  VDLDRIAFNVRQIK-AMAGPGTQVAAVVKADGYGHGALGIAPAIMENGASLLAVATLSEA 78

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+   +  +            D  +  VL        +T++Q       A +  ++  +
Sbjct: 79  VELKQAYPGYPVLIMGLTP---DRLLPYVLEYGIIQTIDTLAQARLLNRLASEKKQQAVI 135

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNG-LMFHNNCENKSFLCFSAML 179
            I                      ++ +           G        +++S        
Sbjct: 136 HIKYD----TGFHRIGFPDCPESLDEIRQICSMPWLKPEGIYSHLALKDDQSNQVQFRCF 191

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSE-KYSVQIYLEPGEAIV 238
            +   E         +  +   I   D      D  +        K   +  L+  +A+ 
Sbjct: 192 MDAVNELESEGCHFRYKHIADSIAAVDFPEYRLDMIRAGAIVYGLKGFHKGQLDIRQALT 251

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHV--PDYLLYQESATIYPNTGPYT-----AM 291
             T   + T +   + +    +  +  +  V    +                T       
Sbjct: 252 FKTRISHITPVLKGQGVSYDYLWTAPQDTRVAALPFGYADGYPRNLRGKAMVTLRGKQVP 311

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
           V G  C+   +  +       +IGD++  
Sbjct: 312 VIGVICMDQCMI-DLTDVPEAQIGDQVII 339


>gi|296536540|ref|ZP_06898627.1| threonine aldolase [Roseomonas cervicalis ATCC 49957]
 gi|296263136|gb|EFH09674.1| threonine aldolase [Roseomonas cervicalis ATCC 49957]
          Length = 368

 Score = 43.6 bits (101), Expect = 0.048,   Method: Composition-based stats.
 Identities = 37/329 (11%), Positives = 80/329 (24%), Gaps = 26/329 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60
           + TP  ++D      NLD         G KL    K   +  +    + +   G     +
Sbjct: 16  VDTPALILDLDAFEANLDAMAAFLAPTGAKLRAHAKTHKSPVVALQQMRRGAVGQCVQKV 75

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT----IIFNTVSQLNKFKDKAQKLHK 116
            E          +    N      ++  +L+        +  +  + +   +  A+   +
Sbjct: 76  AEAEALAWGGVPDILVSNEVVSPRKLARLLALSAISKVALCADDAAGVALIEQAAEAAGQ 135

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC--ENKSFLC 174
           +  + +   V            P             S      GL  ++      +S   
Sbjct: 136 RATVLVEIDVGA----GRCGVAPGPEAVALASRIAASPHLIFGGLQAYHGSAQHIRSPEG 191

Query: 175 FSAMLKNIEKEFGHFITQIE-----WISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQI 229
            +A ++         + Q+         +GG    T            ++  S  +    
Sbjct: 192 RAAAIEAAIGHTRRSVEQLRQQGLACAIVGGAGTGTFPHEAASGVYNEVQAGSYAFMDAD 251

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT 289
           Y    +A           VL    +                            P      
Sbjct: 252 YAANEQAPPFRHALF---VLAQVMSAPRQGFAVLDAGHKAAPTDSGFPKVWQRPG----- 303

Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRI 318
               G S   G++  E      +  G+++
Sbjct: 304 LRYAGASDEHGNLLAEDGPAPKL--GEKL 330


>gi|254372706|ref|ZP_04988195.1| alanine racemase [Francisella tularensis subsp. novicida GA99-3549]
 gi|151570433|gb|EDN36087.1| alanine racemase [Francisella novicida GA99-3549]
          Length = 365

 Score = 43.6 bits (101), Expect = 0.048,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 59/176 (33%), Gaps = 12/176 (6%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTL----NQYMDGTTSSSLYEVM 64
           I  Q L NN+        +   K+   +K  A     + +    +  +D    +++ E  
Sbjct: 6   ISVQTLRNNITIIKEYVGS--AKICFPVKANAYGHGLELIVEHSHDLVDFFAVANVLEAF 63

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
              +        +    +   ID +LS    I     + + K +  A+  +KK  + +N 
Sbjct: 64  RVLDVVEKPVMIFG-VIEYNYIDRILSKNIRISIQDYNDIEKLEKFAKYYNKKPFVHVNI 122

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +   ++  +   +          +   ES+   + G+  H  C +      +   K
Sbjct: 123 NTGMNRMGVDYNDAC-----RTIQRAYESDWLILEGVYSHLACADNRDHPTNIKQK 173


>gi|46578833|ref|YP_009641.1| arginine decarboxylase [Desulfovibrio vulgaris str. Hildenborough]
 gi|46448245|gb|AAS94900.1| arginine decarboxylase [Desulfovibrio vulgaris str. Hildenborough]
          Length = 659

 Score = 43.6 bits (101), Expect = 0.049,   Method: Composition-based stats.
 Identities = 37/289 (12%), Positives = 80/289 (27%), Gaps = 48/289 (16%)

Query: 11  KQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD----GTTSS 58
           +  L + + +     +NA          + +  +K      + + + Q+      G    
Sbjct: 93  ENILDSQITSLHTSFRNAIGSLGYKGEYRGIFPIKVNQQQQVVEKIAQFGSHYHHGLEVG 152

Query: 59  SLYEVMLGHEKF-GGETHAYNVAYKDCEIDAVLSN------CDTIIFNTVSQLNKFKDKA 111
           S  E++    +    E       YKD E   +  +          +     +L+   ++ 
Sbjct: 153 SKAELIAAVSQLRDREACLVCNGYKDEEFIDLGLHAVRLGFMCIFVLEMPGELDLILERG 212

Query: 112 QKLHKKIGLRINPSVSYS-KFILADPNRPFSRLGEKCKDKIESEIK--------NVNGLM 162
           + L  K  + +   +S        D     S  G      ++   +            L 
Sbjct: 213 EALGVKPIIGVRAKLSVKAGGHWTDSGGERSTFGLTTSQIVDVVDRLKEKGMLDCFKLLH 272

Query: 163 FHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK------------ 207
           +H   +    +           I          + ++ LGGG+                 
Sbjct: 273 YHLGSQVPNIRDIRAAVMEACRIYAGLVQEGAAMGFLDLGGGLAVDYDGSHTNFVSSRNY 332

Query: 208 --DYPVKDFCQRLKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDI 251
             D    D  + +    ++       I  E G A V   + L   +LD+
Sbjct: 333 TLDEYCADIVEAVMTTLDEQNIPHPHIVTESGRATVAYYSMLLFNILDV 381


>gi|115360046|ref|YP_777184.1| alanine racemase domain-containing protein [Burkholderia ambifaria
           AMMD]
 gi|115285334|gb|ABI90850.1| alanine racemase domain protein [Burkholderia ambifaria AMMD]
          Length = 376

 Score = 43.6 bits (101), Expect = 0.049,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 48/172 (27%), Gaps = 11/172 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  LID  ++ NN+          GVK    +K      + D  +     G T S+L
Sbjct: 6   LNTPAALIDVDRMRNNIARMQAHLDALGVKFRPHVKTTKCQQVVDAQIAAGAQGITVSTL 65

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDA-----VLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E        G     Y V     ++              I+ +++   N   +      
Sbjct: 66  KEAEQFFAA-GVRDIVYAVGMIPAKLGQALALRRQGCDLKIVADSLETANAIAE--FGRE 122

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
                 +   V           RP   L       +      + G++ H   
Sbjct: 123 HGERFDVWIEVDVDGHR--SGIRPDDALLIDVGRALVDGGMALGGVLAHAGS 172


>gi|83950233|ref|ZP_00958966.1| threonine aldolase, low-specificity [Roseovarius nubinhibens ISM]
 gi|83838132|gb|EAP77428.1| threonine aldolase, low-specificity [Roseovarius nubinhibens ISM]
          Length = 387

 Score = 43.6 bits (101), Expect = 0.049,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 66/211 (31%), Gaps = 12/211 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTSSS 59
           I+TP  ++D   L  N+       K+ G++  +  K   +  +    ++     G     
Sbjct: 27  IQTPCLVLDLDALERNIKKMGDYAKSHGMRHRVHGKMHKSVDVAKLQHELGGAVGVCCQK 86

Query: 60  LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNC-----DTIIFNTVSQLNKFKDKAQKL 114
           + E  +       +    N      +ID +           +  + +  + +  + AQK 
Sbjct: 87  VSEAEVFARGGIKDILVSNQVRDPAKIDRLAQLPKFGARVIVCVDDIDNVAELSEAAQKH 146

Query: 115 HKKIGLRINPSVSY--SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN--- 169
              + + I           +  +     ++  +       S I+   G M H +      
Sbjct: 147 GTTLDIFIEIDCGAGRCGVVTTEAVIDIAKAVDAAPALRFSGIQAYQGAMQHIDSYEARK 206

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGG 200
           +      AM+++            E +S GG
Sbjct: 207 EKLDVAIAMVQDAVDGLKAEGLSCELVSGGG 237


>gi|125624499|ref|YP_001032982.1| alanine racemase [Lactococcus lactis subsp. cremoris MG1363]
 gi|20137246|sp|Q9RLU5|ALR_LACLM RecName: Full=Alanine racemase
 gi|16974088|emb|CAB56755.2| alanine racemase [Lactococcus lactis subsp. cremoris MG1363]
 gi|124493307|emb|CAL98277.1| Alr protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|300071289|gb|ADJ60689.1| alanine racemase [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 367

 Score = 43.6 bits (101), Expect = 0.050,   Method: Composition-based stats.
 Identities = 22/184 (11%), Positives = 58/184 (31%), Gaps = 9/184 (4%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDGTTSSSLYEV 63
           ++D + + NN++       N   ++  A+K  A    +  +   ++  + G   S+L E 
Sbjct: 12  IVDLKAIRNNIEKFKKHI-NPNAEIWPAVKADAYGHGSIEVSKAVSDLVGGFCVSNLDEA 70

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +        +           ++D   +   ++   +   L   K   Q+  +   L+I+
Sbjct: 71  IELRNHLVTKPILVLSGIVPEDVDIAAALNISLTAPS---LEWLKLVVQEEAELSDLKIH 127

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
             V      +   +   +    +  DK     + +    F            +   +  +
Sbjct: 128 IGVDSGMGRIGIRDVEEANQMIELADKYAINFEGI-FTHFATADMADETKFKNQQARFNK 186

Query: 184 KEFG 187
              G
Sbjct: 187 IMAG 190


>gi|208779130|ref|ZP_03246476.1| alanine racemase [Francisella novicida FTG]
 gi|208744930|gb|EDZ91228.1| alanine racemase [Francisella novicida FTG]
          Length = 365

 Score = 43.6 bits (101), Expect = 0.051,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 59/176 (33%), Gaps = 12/176 (6%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTL----NQYMDGTTSSSLYEVM 64
           I  Q L NN+        +   K+   +K  A     + +    +  +D    +++ E  
Sbjct: 6   ISVQTLRNNITIIKEYVGS--AKICFPVKANAYGHGLELIVEHSHDLVDFFAVANVLEAF 63

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
              +        +    +   ID +LS    I     + + K +  A+  +KK  + +N 
Sbjct: 64  RVLDVVEKPVMIFG-VIEYNYIDRILSKNIRISIQDYNDIEKLEKFAKYYNKKPFVHVNI 122

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +   ++  +   +          +   ES+   + G+  H  C +      +   K
Sbjct: 123 NTGMNRMGVDYNDAC-----RTIQRAYESDWLILEGVYSHLACADNRDHPTNIKQK 173


>gi|254481208|ref|ZP_05094453.1| alanine racemase [marine gamma proteobacterium HTCC2148]
 gi|214038371|gb|EEB79033.1| alanine racemase [marine gamma proteobacterium HTCC2148]
          Length = 360

 Score = 43.6 bits (101), Expect = 0.052,   Method: Composition-based stats.
 Identities = 35/331 (10%), Positives = 79/331 (23%), Gaps = 35/331 (10%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF------AAWG-MFDTLNQYMDGTTSSSLY 61
           +D   L +NL  A  +      K++  +K             +F  +   +         
Sbjct: 9   LDLAALRHNLAHARQLAPE--CKVMCVVKANGYGHGALNVARVFAPMADALAVACIEEAI 66

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E+                 ++  E+         ++ +    L   +           L+
Sbjct: 67  ELR--DGGIETPILLLQGVFEAQELIIASQQNFWVMVDNRQHLYWLEQARLPAPVTCWLK 124

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           I+  +      L       +   ++         + V    F +  E         +   
Sbjct: 125 IDTGM----HRLGVQPEEAAEFHQRLSSCENRTGELVTCTHFASADELDKPQTTEQLALF 180

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
                     +    +  G + + +  Y                S      P    +   
Sbjct: 181 ESITADLPGPR-SAANSSGLLGWPNSHYDWIRPG----YMLYGNSPFTATHPNTDTLHPV 235

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYL-------LYQESATIYPNTGP-----YT 289
            TL + V+ I        +  ++                       +  N  P       
Sbjct: 236 MTLCSAVISIRNVASGESVGYAANWTAQRPSRIATVSIGYGDGYPRLAANGTPVLINGQR 295

Query: 290 AMVCGRSCLAGDIFGEFHF-EKPVKIGDRIS 319
           A + GR   + D+          VK+GD++ 
Sbjct: 296 APLAGRV--SMDMITVDITDLDDVKLGDQVI 324


>gi|294102773|ref|YP_003554631.1| alanine racemase domain protein [Aminobacterium colombiense DSM
           12261]
 gi|293617753|gb|ADE57907.1| alanine racemase domain protein [Aminobacterium colombiense DSM
           12261]
          Length = 377

 Score = 43.2 bits (100), Expect = 0.058,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 57/210 (27%), Gaps = 12/210 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGTTSSSL 60
           + TP  L+D   +  N+       + AGV L   +K      +    L     G T + L
Sbjct: 17  LDTPSLLVDLDVMERNISWMQQKAQRAGVNLRPHIKTHRTPDIAKKQLAAGAKGITVAKL 76

Query: 61  YEVM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E   +  E       A  +A        +     T +   V   +  K  A+    +  
Sbjct: 77  GEGEVMAAEGIDDIFIANELAGDIKMDRLLALARKTTLAVGVDHPDHVKMLAETFDGESR 136

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNG--------LMFHNNCENKS 171
                 +                + E  K     +   + G               E +S
Sbjct: 137 PM-EIMIDVDTGYHRTGVGSKEEILELAKLIRYRDSLKLRGIFTHDGNCYNATTISEVRS 195

Query: 172 FLCFSAMLKN-IEKEFGHFITQIEWISLGG 200
               S  +   + +        +E IS+G 
Sbjct: 196 ISQSSQNMMLEMAEFLRKEGIGVEEISIGS 225


>gi|288941546|ref|YP_003443786.1| alanine racemase [Allochromatium vinosum DSM 180]
 gi|288896918|gb|ADC62754.1| alanine racemase [Allochromatium vinosum DSM 180]
          Length = 367

 Score = 43.2 bits (100), Expect = 0.059,   Method: Composition-based stats.
 Identities = 23/210 (10%), Positives = 49/210 (23%), Gaps = 11/210 (5%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDGTTSSSLYEVM 64
           I    + +N   A  +   +    +  +K  A    A  +  TL    DG   + + E +
Sbjct: 12  IHLDAIRHNYRRAKSLAPRSRALAV--VKANAYGHGAIAVARTLADEADGFAVACVEEAL 69

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
              E    E           +  A++      +        +        H    L    
Sbjct: 70  ELRESGIQEPMLLLEGVFSPDEIALVERAGLAMVV--HCREQLDWV-LNAHPSRRLDCWI 126

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEK 184
            +      +      F+ +  +         + V    F    E       SA ++  E+
Sbjct: 127 KLDTGMHRVGFSLSEFAEVNARLA-ACPHVGERVAMTHFARADEIDHP-YTSAQIEAFEQ 184

Query: 185 EFGHFITQIEWISLGGGIHFTDKDYPVKDF 214
                       +      +          
Sbjct: 185 ALNGARIGRSLANSAAVFAWPQAHGDWTRP 214


>gi|170697287|ref|ZP_02888381.1| alanine racemase domain protein [Burkholderia ambifaria IOP40-10]
 gi|170137907|gb|EDT06141.1| alanine racemase domain protein [Burkholderia ambifaria IOP40-10]
          Length = 376

 Score = 43.2 bits (100), Expect = 0.061,   Method: Composition-based stats.
 Identities = 40/322 (12%), Positives = 79/322 (24%), Gaps = 31/322 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           + TP  LID  ++ NN+          GV+    +K      + D        G T S+L
Sbjct: 6   LNTPAALIDVDRMRNNIARMQAHLDALGVRFRPHVKTTKCQHVVDAQIAGGAQGITVSTL 65

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDA-----VLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E        G     Y V     ++              I+ ++V   N   +      
Sbjct: 66  KEAEQFFAA-GVRDIVYAVGMIPAKLGQALALRRQGCDLKIVADSVETANAIAE--FGRE 122

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF--- 172
                 +   +         P  P   L       +      + G++ H     +     
Sbjct: 123 HGERFDVWIEIDVDGHRSGIP--PDDGLLIDVGRALVDGGMALGGVLAHAGSSYEYDMRD 180

Query: 173 ------LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226
                     +   +  +           +S+G           +    +        + 
Sbjct: 181 ALVAIAEQERSRTVHAAERLRAAGLPCPVVSIG-STPTALSATNLDGVTEVRAGVYVLFD 239

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286
           + ++     A+     ++ TTV+   E               + D      S        
Sbjct: 240 LVMHNIGVCALADIALSVLTTVIGHQEEKGWA----------IVDAGWMAMSRDRGTQRQ 289

Query: 287 PYTAMVCGRSCLAGDIFGEFHF 308
                        GD+ GE+  
Sbjct: 290 ARDFGYGQVCTEDGDVLGEYVM 311


>gi|302188653|ref|ZP_07265326.1| alanine racemase, N-terminal [Pseudomonas syringae pv. syringae
           642]
          Length = 378

 Score = 43.2 bits (100), Expect = 0.062,   Method: Composition-based stats.
 Identities = 21/171 (12%), Positives = 46/171 (26%), Gaps = 9/171 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  L+D  ++ +N+          GV+L   +K      +    +     G T S+L
Sbjct: 8   LDTPVALLDVSRMQHNIQRMQQRMNELGVRLRPHVKTSKCLPVIQAQIAAGASGVTVSTL 67

Query: 61  YEVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
            E      +   +     A      +  +      C   I+ ++V+              
Sbjct: 68  KEAEHCFAEGIDDVFYAVAIAPGKLEQALRLRRKGCRLSILTDSVAAARAI--VVFGQAH 125

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
                +   +                   +    +      + G+M H   
Sbjct: 126 DERFDVWIEIDCDGHRSGLTV--DDPSLIEVARTLVDGGMQLRGVMTHAGS 174


>gi|146340130|ref|YP_001205178.1| putative amino acid processing-like protein [Bradyrhizobium sp.
           ORS278]
 gi|146192936|emb|CAL76943.1| putative amino acid processing enzyme-related protein (aldolase or
           racemase) [Bradyrhizobium sp. ORS278]
          Length = 359

 Score = 43.2 bits (100), Expect = 0.062,   Method: Composition-based stats.
 Identities = 27/256 (10%), Positives = 62/256 (24%), Gaps = 26/256 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLY 61
            TP  +ID  K+  N+         AGV     +K   +  +     +    G T   + 
Sbjct: 14  GTPCAVIDMDKVERNIARIQAQCAAAGVANRPHIKTHKSPVLAKLQIEAGAQGITCQKIG 73

Query: 62  EVM-LGHEKFGGETHAYNVAYKDCEIDAV---LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
           E   +          +YN+  ++              T+  +  + +      A++  + 
Sbjct: 74  EAEIMADAGINNILISYNLIGEEKMARLAALQAKADMTVAADNATVIAGLPQAAKQSGRT 133

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
           + + +                  +   +  +    SE     G M +   E+        
Sbjct: 134 LSVVVECD----TGRKRAGVETPAEAIQLARQIKASEGLRFAGFMLY-PTESGWDDAQRF 188

Query: 178 MLKNIEKEFGHFITQIEWISLGGG---------------IHFTDKDYPVKDFCQRLKEFS 222
             + +         +   +S GG                   T            +  + 
Sbjct: 189 YDEALAGVRAE-GLEASIVSTGGSPNLKNIGKLKGATEHRPGTYIYNDRMQVAAGVATWD 247

Query: 223 EKYSVQIYLEPGEAIV 238
           +            A  
Sbjct: 248 DCALHIYSTVVSRAAP 263


>gi|320328125|gb|EFW84130.1| alanine racemase domain-containing protein [Pseudomonas syringae
           pv. glycinea str. race 4]
          Length = 378

 Score = 43.2 bits (100), Expect = 0.064,   Method: Composition-based stats.
 Identities = 23/171 (13%), Positives = 48/171 (28%), Gaps = 9/171 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  L+D  ++  N+    +     GV+L   +K      +    +     G T S+L
Sbjct: 8   LDTPVALLDVPRMQRNIQRMQHRINELGVRLRPHVKTSKCLPVIQAQIAADASGVTVSTL 67

Query: 61  YEVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
            E      +   +     A      D  +    + C   I+ ++V         A     
Sbjct: 68  KEAEHCFAEGINDVFYAVAIAPGKLDQALKLRRNGCRLSILTDSVVAAQAI--VAFGQRH 125

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
                +   +                   +    +     ++ G+M H   
Sbjct: 126 DENFDVWIEIDCDGHR--SGLTIDDPSLVEVARTLIEGGMHLRGVMTHAGS 174


>gi|148255000|ref|YP_001239585.1| putative amino acid processing enzyme-like protein [Bradyrhizobium
           sp. BTAi1]
 gi|146407173|gb|ABQ35679.1| putative amino acid processing enzyme-related protein (aldolase or
           racemase) [Bradyrhizobium sp. BTAi1]
          Length = 359

 Score = 43.2 bits (100), Expect = 0.068,   Method: Composition-based stats.
 Identities = 26/256 (10%), Positives = 60/256 (23%), Gaps = 26/256 (10%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSLY 61
            TP  +ID  ++  N+         AGV     +K   +  +    +     G T   + 
Sbjct: 14  GTPCAVIDMDRVERNIARIQAQCAAAGVANRPHIKTHKSPELAKLQIAAGAQGITCQKIG 73

Query: 62  EVM-LGHEKFGGETHAYNVAYKDCEIDAV---LSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
           E   +          +YN+  ++              T+  +    +    + A++  + 
Sbjct: 74  EAEIMAEAGIDNVLISYNLIGEEKMARLAALQAKADMTVAADNPVVVAGLPEAAKQSGRT 133

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
           + + +                  +   +  +    SE     G M +   E         
Sbjct: 134 LSVVVECD----TGRKRAGVETPAEAIQLARQIKVSEGLRFAGFMLY-PTETGWDEAQRF 188

Query: 178 MLKNIEKEFGHFITQIEWISLGGG---------------IHFTDKDYPVKDFCQRLKEFS 222
             + +             +S GG                   T            +  + 
Sbjct: 189 FDEALAGVRAE-GLDAAIVSTGGSPNLKNLGKLKGATEHRPGTYIYNDRMQVAAGVATWD 247

Query: 223 EKYSVQIYLEPGEAIV 238
           +            A  
Sbjct: 248 DCALHIYSTVVSRAAP 263


>gi|89055095|ref|YP_510546.1| D-3-hydroxyaspartate aldolase [Jannaschia sp. CCS1]
 gi|88864644|gb|ABD55521.1| D-3-hydroxyaspartate aldolase [Jannaschia sp. CCS1]
          Length = 387

 Score = 43.2 bits (100), Expect = 0.069,   Method: Composition-based stats.
 Identities = 26/229 (11%), Positives = 63/229 (27%), Gaps = 10/229 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTSSS 59
           I+TP  ++D   L  N+       +  G++  +  K   +  +     +     G     
Sbjct: 27  IQTPCLVLDLDALERNIKKMGDYAREHGMRHRVHGKMHKSVDVAKLQEELGGACGVCCQK 86

Query: 60  LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNC-----DTIIFNTVSQLNKFKDKAQKL 114
           + E  +       +    N      +ID +              +  + +      A K 
Sbjct: 87  VSEAEVFARGGIKDVMVSNQVTDPQKIDRLARMPKFGARVLCCVDDPANVADLSAAAVKH 146

Query: 115 HKKIGLRINPSVSY--SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF 172
             +I   +                    +++ +  +    + I+   G M H +  ++  
Sbjct: 147 GTQIEALVEIDCGAGRCGVTTTQEVVNIAKMIDAAEGLKFAGIQAYQGAMQHLDSYDERA 206

Query: 173 LCFSAMLKNIEKEFGHFITQ-IEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 +  +E          +E   +GGG   +            L+ 
Sbjct: 207 SKTQVAIDMVEDAIAGLKANGLECDIVGGGGTGSYYFESNSGAFNELQC 255


>gi|309779212|ref|ZP_07673975.1| alanine racemase, N- domain protein [Ralstonia sp. 5_7_47FAA]
 gi|308922016|gb|EFP67650.1| alanine racemase, N- domain protein [Ralstonia sp. 5_7_47FAA]
          Length = 382

 Score = 43.2 bits (100), Expect = 0.070,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 52/172 (30%), Gaps = 11/172 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           I TP  LID  ++ +N+    +     GVK    +K      +          G T S+L
Sbjct: 11  IDTPAALIDLPRMQHNIARMQHRMNALGVKFRPHVKTTKCLDVVRAQVAAGAQGITVSTL 70

Query: 61  YEVMLGHEKFGGETHAYNVA----YKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLH 115
            E        G +   Y V          +      CD  ++ +     +   D A+   
Sbjct: 71  KEAE-AFFAAGIKDILYAVGIVATKLPRAMALRKRGCDLKLVVDNAEAAHAVVDYARAHG 129

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
                 +   V              + L       +++   +V+G+M H   
Sbjct: 130 --ERCEVWIEVDTDGHRSGITPEQDALLEVG--RILKNGGIDVSGVMTHAGS 177


>gi|158422357|ref|YP_001523649.1| putative amino acid aldolase [Azorhizobium caulinodans ORS 571]
 gi|158329246|dbj|BAF86731.1| putative amino acid aldolase [Azorhizobium caulinodans ORS 571]
          Length = 369

 Score = 43.2 bits (100), Expect = 0.070,   Method: Composition-based stats.
 Identities = 24/200 (12%), Positives = 51/200 (25%), Gaps = 3/200 (1%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSL- 60
           + TP  ++D      NLDT   + K  G KL    K   +  +     Q           
Sbjct: 16  VDTPALILDLDAFEANLDTMAALLKPTGAKLRAHAKTHKSAVIARLQMQRGAVGQCVQKV 75

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E     +    +    N   +  ++  + +          +         +   +  G+
Sbjct: 76  GEAEALAQAGINDILVSNEVVEPRKLKRLAALSSIARVQLCADDPAAIPPIEAAAEAAGI 135

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN--KSFLCFSAM 178
           R++  V            P +   E       S+     GL  +       +        
Sbjct: 136 RLSVLVEIEVGAKRCGLEPGAPAAELAARIAGSKHLTFGGLQAYYGSAQHKRQPEERRQA 195

Query: 179 LKNIEKEFGHFITQIEWISL 198
           +          +  ++   L
Sbjct: 196 IAFAAGCVEQTLDALKTRGL 215


>gi|319956784|ref|YP_004168047.1| arginine decarboxylase [Nitratifractor salsuginis DSM 16511]
 gi|319419188|gb|ADV46298.1| arginine decarboxylase [Nitratifractor salsuginis DSM 16511]
          Length = 622

 Score = 43.2 bits (100), Expect = 0.071,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 77/303 (25%), Gaps = 50/303 (16%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  L     +   +DT     + A            +  LK        ++L +      
Sbjct: 47  PLLLRFPHLIRKQIDTLFGAFERARREFKYSGKFHAVFPLKVNQYPNFVESLIEVSGRRR 106

Query: 54  -GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK-- 110
            G  + S  E+++   K           +KD E+ A+         N    +    +   
Sbjct: 107 YGLEAGSKAELIIAMAKTPLGAPITVNGFKDKEMIALAFIAAKSGHNITLTIEGINELET 166

Query: 111 -----------AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--- 156
                      A               S    I A      S+ G    + +E+      
Sbjct: 167 IIEVHRECNRDASAPITPKIGMRIRLHSTGVGIWAKSGGYSSKFGLTSTELLEAYEMLRQ 226

Query: 157 -----NVNGLMFHN---NCENKSFLCFSAMLKNIEKEFGHFITQ-IEWISLGGGIHFTDK 207
                ++  + FH      E            NI  E      + +  I++GGG+     
Sbjct: 227 EDLIGSLAMIHFHIGSQMSEIGPLKKALREAGNIYAELKRRGAENLHAINIGGGLAVEYS 286

Query: 208 DY-------------PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN 254
            +              V    Q +          I+ E G  I      L   VL++   
Sbjct: 287 QHQPSRNYSIKEFANDVVFAMQEIARQKGVEEPDIFTESGRFIAAPHAVLVAPVLELFSQ 346

Query: 255 IKN 257
             +
Sbjct: 347 EYH 349


>gi|291557577|emb|CBL34694.1| alanine racemase [Eubacterium siraeum V10Sc8a]
          Length = 379

 Score = 43.2 bits (100), Expect = 0.071,   Method: Composition-based stats.
 Identities = 39/326 (11%), Positives = 84/326 (25%), Gaps = 19/326 (5%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDGTTSSS-LYEV 63
           ID   L +N +    + K   +  +  +K  A       +   L +        S L+E 
Sbjct: 12  IDLDALEHNYNEIKKLAKGKDILAV--VKANAYGHDDKAVCLKLQELGVKYYGVSNLWEG 69

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
               +     T        +   D +L    T    +V    +  D A     K+ + I 
Sbjct: 70  EKLRQHGITGTILTFGYTDEDYFDELLEYGITQTAGSVQYAKQLSDYAVSKGVKLPVHIK 129

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
            +   ++  +         L     D   +           ++ +           + + 
Sbjct: 130 VNTGMTRVGIDSQQEMLDILAMPGLDCKAAY----THFAAADSLDPSDVEYTDRQQEKLM 185

Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243
           K        I   + GG I+  D    +      L      Y +++  +    +   +  
Sbjct: 186 KIAKDKGLFIHSQNSGGIIYHGDFGGDIVRAGVILYGHYPNYPLEVPFDMKSVMTVKSVV 245

Query: 244 LNTTVL--DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-----YTAMVCGRS 296
                +      +       +  +   V            + + G          V GR 
Sbjct: 246 SQLKTIPAGTQISYGRTYTAEKEMTVAVIPIGYADGYFRDFSSKGKMLINGVLCNVVGRV 305

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFED 322
           C+      +      +K GD +    
Sbjct: 306 CMDQ-TIVDVSNVPDIKTGDIVYVYS 330


>gi|315453395|ref|YP_004073665.1| biosynthetic arginine decarboxylase [Helicobacter felis ATCC 49179]
 gi|315132447|emb|CBY83075.1| biosynthetic arginine decarboxylase [Helicobacter felis ATCC 49179]
          Length = 626

 Score = 42.8 bits (99), Expect = 0.076,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 86/306 (28%), Gaps = 55/306 (17%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWG-MFDTLN-----Q 50
           P  L     +   ++    +   A          K +  LK       +   +      +
Sbjct: 46  PLLLRFPHLISKQVNKLFNMFSQAIEQYHYSGAFKAVFPLKVNHMPHFVLPLVEISKRFK 105

Query: 51  YMDGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK 110
              G  + S  E++L               +KD E+  +     ++  +    +    + 
Sbjct: 106 GCYGLEAGSKAELILAMSYVQEGAPITVNGFKDREMIELGFIAASMGADITLTIEGLNEL 165

Query: 111 -------------AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI------ 151
                        + KL  KIG+R+    S    + A      ++ G    + +      
Sbjct: 166 KTILEVARARGIGSNKLCPKIGIRVRLHSSGVG-MWAKSTGIHAKFGLASTELLEAMRLL 224

Query: 152 --ESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFT 205
              + +  +  + FH   +          LK     +          ++ +++GGG+   
Sbjct: 225 EDHALLAQLRMIHFHIGSQISDITPLKKALKEAGNIYAELRKMGAFNLDSVNIGGGLAIE 284

Query: 206 DKDY---------------PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLD 250
              +                V    + + +  ++    I++E G  I      L   VL+
Sbjct: 285 YAQHKHQCERNYTLEEFAGDVVFLLKEIVKHKQELEPNIFIESGRFISATHAVLVAPVLE 344

Query: 251 ISENIK 256
           +     
Sbjct: 345 LFSQDY 350


>gi|330986553|gb|EGH84656.1| alanine racemase domain-containing protein [Pseudomonas syringae
           pv. lachrymans str. M301315]
          Length = 378

 Score = 42.8 bits (99), Expect = 0.077,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 47/171 (27%), Gaps = 9/171 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  L+D  ++  N+    +     GV+L   +K      +    +     G   S+L
Sbjct: 8   LDTPVALLDVPRMQRNIQRMQHRMNELGVRLRPHVKTSKCLPVIQAQIAAGASGVAVSTL 67

Query: 61  YEVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
            E      +   +     A      D  +    + C   I+ ++V         A     
Sbjct: 68  KEAEHCFAEGINDVFYAVAIAPGKLDQALKLRRNGCRLSILTDSVVAAQAI--VAFGQRH 125

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
                +   +                   +    +     ++ G+M H   
Sbjct: 126 DENFDVWIEIDCDGHRSGLTV--DDPSLVEVARTLIEGGMHLRGVMTHAGS 174


>gi|254255433|ref|ZP_04948749.1| hypothetical protein BDAG_04773 [Burkholderia dolosa AUO158]
 gi|124901170|gb|EAY71920.1| hypothetical protein BDAG_04773 [Burkholderia dolosa AUO158]
          Length = 398

 Score = 42.8 bits (99), Expect = 0.078,   Method: Composition-based stats.
 Identities = 40/318 (12%), Positives = 76/318 (23%), Gaps = 23/318 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  LID  ++  N++         GV+    +K      + D  +     G T S+L
Sbjct: 28  LNTPAALIDVARMNRNIERMQQRMNALGVRFRPHVKTTKCTQVVDAQMKAGARGITVSTL 87

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCE-----IDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E        G     Y V     +               I+ ++V+  +     A    
Sbjct: 88  KEAERFFAG-GIRDIVYAVGIAPSKLPQALALRRQGCDLKIVADSVACADAI--VAFGRE 144

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175
                 +   +                L              +       +  +      
Sbjct: 145 HAERFDVWIEIDVDGHRSGIAPDGDRLLPV----ATTLVNGGMQLGGVIAHAGSSYDYDT 200

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
              L  I ++      +        G+                   +E       +  G 
Sbjct: 201 HDELVRIAEQERAGCVRAAERIRAAGLPCDVVSIGSTPTA----LAAEHLEGVTEVRAGV 256

Query: 236 AIVTNTTTLNTTVLDISENI----KNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAM 291
            ++ +    N  V D SE        ++   S     + D      S             
Sbjct: 257 YVMFDLVMHNVGVSDTSEIALSVLTTVIGHQSDKGWAIVDAGWMAMSRDRGTQRQKRDFG 316

Query: 292 VCGRSC-LAGDIFGEFHF 308
             G  C   GD+ G++  
Sbjct: 317 -YGLVCAENGDVLGDYLL 333


>gi|146305685|ref|YP_001186150.1| alanine racemase [Pseudomonas mendocina ymp]
 gi|145573886|gb|ABP83418.1| alanine racemase [Pseudomonas mendocina ymp]
          Length = 358

 Score = 42.8 bits (99), Expect = 0.080,   Method: Composition-based stats.
 Identities = 20/145 (13%), Positives = 44/145 (30%), Gaps = 9/145 (6%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFAA----WGMFDTLNQYMDGTTSSSLYE 62
           ++D   + +N   A             A+ K  A       +   L++  DG   +SL E
Sbjct: 7   IVDLSAIAHNYAVAKRCAPGRQA---FAVVKANAYGHGVREVVTALHEVADGFAVASLEE 63

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLR 121
                   G           +    A+ +     ++  + +Q +            + L+
Sbjct: 64  AAEVRAMHGEARILLLEGCFEASEYAIAAQLGLDLVVQSAAQADALLACEPARPLNVWLK 123

Query: 122 INPSVSYSKFILADPNRPFSRLGEK 146
           ++  +    F  A   +  +RL   
Sbjct: 124 LDSGMHRLGFDAASLRQWHARLEMA 148


>gi|167750416|ref|ZP_02422543.1| hypothetical protein EUBSIR_01390 [Eubacterium siraeum DSM 15702]
 gi|167656567|gb|EDS00697.1| hypothetical protein EUBSIR_01390 [Eubacterium siraeum DSM 15702]
          Length = 379

 Score = 42.8 bits (99), Expect = 0.080,   Method: Composition-based stats.
 Identities = 37/328 (11%), Positives = 83/328 (25%), Gaps = 23/328 (7%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDGTTSSS---LY 61
           ID   L +N +    + K   +  +  +K  A       +   L +        S     
Sbjct: 12  IDLDALEHNYNEIKKLAKGKDILAV--VKANAYGHDDKAVCLKLQELGVKYYGVSNLWEG 69

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E +  H    G    +    +D   + +          +V    +  D A     K+ + 
Sbjct: 70  EKLRCH-GITGTILTFGYTDEDYFDELLEYGITQ-TAGSVQYAKQLSDYAVSKGVKLPVH 127

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           I  +   ++  +         L     D   +           ++ +           + 
Sbjct: 128 IKVNTGMTRVGIDSQQEMLDILAMPGLDCKAAY----THFAAADSLDPSDVEYTDRQQEK 183

Query: 182 IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           + K        I   + GG I+  D    +      L      Y +++  +    +   +
Sbjct: 184 LMKIAKDKGLLIHSQNSGGIIYHGDFGGDIVRAGVILYGHYPNYPLEVPFDMKSVMTVKS 243

Query: 242 TTLNTTVL--DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-----YTAMVCG 294
                  +      +       +  +   V            + + G          V G
Sbjct: 244 VVSQLKTIPAGTQISYGRTYTAEKEMTVAVIPIGYADGYFRDFSSKGKMLINGVLCNVVG 303

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFED 322
           R C+      +      +K GD +    
Sbjct: 304 RVCMDQ-TIVDVSNVPDIKTGDIVYVYS 330


>gi|168704641|ref|ZP_02736918.1| alanine racemase domain protein [Gemmata obscuriglobus UQM 2246]
          Length = 366

 Score = 42.8 bits (99), Expect = 0.082,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 26/71 (36%), Gaps = 2/71 (2%)

Query: 2  IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSSL 60
          + TP  L+D   +  N+       +  GV++ +  K     G+   +     DG  ++ L
Sbjct: 18 LDTPQLLVDLDVVDGNVRRMFAAARGRGVRVRVHFKSLKCTGLARHVAAAGPDGFAAAKL 77

Query: 61 YEVM-LGHEKF 70
           E   L     
Sbjct: 78 NEAEALADAGV 88


>gi|94313121|ref|YP_586330.1| amino acid processing enzyme (aldolase or racemase) [Cupriavidus
          metallidurans CH34]
 gi|93356973|gb|ABF11061.1| amino acid processing enzyme (aldolase or racemase) [Cupriavidus
          metallidurans CH34]
          Length = 382

 Score = 42.8 bits (99), Expect = 0.082,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 22/78 (28%), Gaps = 2/78 (2%)

Query: 2  IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60
          I TP  ++D      N+         AGVKL    K      +    + Q   G     +
Sbjct: 20 IDTPSLVVDLDVFARNISRMQAAADAAGVKLRPHAKAHKCPDVSVAQIAQGAVGICCQKV 79

Query: 61 YEVM-LGHEKFGGETHAY 77
           E +            + 
Sbjct: 80 SEAVPFARAGIHDIHISN 97


>gi|229083912|ref|ZP_04216217.1| hypothetical protein bcere0022_5660 [Bacillus cereus Rock3-44]
 gi|228699393|gb|EEL52073.1| hypothetical protein bcere0022_5660 [Bacillus cereus Rock3-44]
          Length = 390

 Score = 42.8 bits (99), Expect = 0.083,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 62/171 (36%), Gaps = 15/171 (8%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTL---NQYMDGTTSSSLY 61
           P   +D++ L  N+ + + +     V++  A K   +  +   +   ++   G    S  
Sbjct: 12  PCAFLDEEALERNIQSIVQLCGRKKVRI--ASKSLRSVSVMKKILDTDRCFQGIMCFSPR 69

Query: 62  EVM-LGHEKFGGETHAYN----VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
           E + L  + F      Y      A ++  +        T + + V  ++  +  A ++  
Sbjct: 70  EALFLVKQGFDDLLLGYPAYDQQALQEISLLTKQGLTITCMVDCVEHIDYLEKIAMEVDG 129

Query: 117 KIGLRINPSVSYSKFILADPNRPFSR-----LGEKCKDKIESEIKNVNGLM 162
              + I+  +S   F L    R         +    +  I+S +  ++G+M
Sbjct: 130 CFRICIDIDMSSQFFQLHFGVRRSPIRTATEILMVIEKIIQSPVLQIDGVM 180


>gi|319794305|ref|YP_004155945.1| alanine racemase domain protein [Variovorax paradoxus EPS]
 gi|315596768|gb|ADU37834.1| alanine racemase domain protein [Variovorax paradoxus EPS]
          Length = 380

 Score = 42.8 bits (99), Expect = 0.084,   Method: Composition-based stats.
 Identities = 16/133 (12%), Positives = 44/133 (33%), Gaps = 8/133 (6%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSS 59
           ++ TP  LID   +  N++      K  G+ L   +K   +  +    +     G +  +
Sbjct: 20  LLDTPALLIDLPAMTRNIERMAAFAKARGIGLRPHVKTHKSIEIARRQVAAGAIGVSCVT 79

Query: 60  LYEVMLGHEKFGGETHAYNVAYKDCEI-------DAVLSNCDTIIFNTVSQLNKFKDKAQ 112
           + E  +  +         + A    +I       +        ++ + ++ +      A 
Sbjct: 80  VGEAEIMVDGGIRSVLITSPAVTPSKIARLVKLAERAAPGGVMVVADNLTNVADLARAAS 139

Query: 113 KLHKKIGLRINPS 125
            L   + + ++  
Sbjct: 140 GLLHPLPVLVDYG 152


>gi|152975352|ref|YP_001374869.1| alanine racemase [Bacillus cereus subsp. cytotoxis NVH 391-98]
 gi|152024104|gb|ABS21874.1| alanine racemase [Bacillus cytotoxicus NVH 391-98]
          Length = 392

 Score = 42.8 bits (99), Expect = 0.087,   Method: Composition-based stats.
 Identities = 29/335 (8%), Positives = 83/335 (24%), Gaps = 32/335 (9%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYM----DGTTSSSL 60
           ++   + +N+        N  + ++ A+K  A    A  +     +              
Sbjct: 13  VNLDAIKHNVKEFKKRIHNENITMMAAVKANAYGHGAVEVAKAATEAGVQQLAVAFVDEG 72

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+             Y       +               +S      + A++L  K  +
Sbjct: 73  IELREAGVTVPILVLGYTPVEAAQDAIEYDIMMTVYRIEELSS---INEIAKQLQTKARV 129

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC----ENKSFLCFS 176
            +          ++        +    K+  +     V G+  H +     +       +
Sbjct: 130 HVKID-----TGMSRIGLQEEEVAPFLKELQKMNHIEVEGMYTHYSTADELDKTYTNMQT 184

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIYLE 232
            + +            I +I         +     ++  +        +  +      + 
Sbjct: 185 KLFEKAVNTAKELGMPIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSREVDHTVVS 244

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287
              A+   +   +      +  +       ++ E  +    +          +       
Sbjct: 245 LQPALSLKSKVAHIKRAKKNRGVSYGNTYMTTGEEWIATVPIGYADGYNRQLSNKGHALI 304

Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
                 V GR C+   +  +     PV++GD + F
Sbjct: 305 NGIRVPVLGRVCMDQ-LMLDVTKAMPVRVGDEVVF 338


>gi|152992949|ref|YP_001358670.1| arginine decarboxylase [Sulfurovum sp. NBC37-1]
 gi|151424810|dbj|BAF72313.1| arginine decarboxylase [Sulfurovum sp. NBC37-1]
          Length = 626

 Score = 42.8 bits (99), Expect = 0.087,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 78/305 (25%), Gaps = 52/305 (17%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTL----NQYM 52
           P  L     +   + T     + A            +  LK          L     QY 
Sbjct: 46  PLLLRFPHLIKKQISTLFSTFEEAKKEFGYQGNFHAVFPLKVNQFPNFIHALIDVSQQYD 105

Query: 53  DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQ--------- 103
            G  + S  E+++   K           +KD E+ ++      +  N             
Sbjct: 106 YGLEAGSKAELIIAITKTPLGAPITVNGFKDKEMISLCFIAAKMGHNITVTIEGLGELET 165

Query: 104 ----LNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK--- 156
                 +F   +               S    I A      S+ G    + +E+      
Sbjct: 166 IIEVNEEFNKGSDTPVSPKIGVRIRLHSSGIGIWAKSGGYTSKFGLTSTELLEAYGMLKQ 225

Query: 157 -----NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQ----IEWISLGGGIHFTDK 207
                 +  + FH   +          L+     +     +    +  I++GGG+     
Sbjct: 226 HKLLDRLWMIHFHIGSQMGDIAPLKKALREAGNIYAELKRRGADSLTAINIGGGLAVEYS 285

Query: 208 DY---------------PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDIS 252
            +                V    Q + +        I+ E G  I  + + L   VL++ 
Sbjct: 286 QHGSSIERNYSLREFANDVVYLMQEIAKRKGVAEPDIFTESGRYIAASHSVLIAPVLELF 345

Query: 253 ENIKN 257
               +
Sbjct: 346 SQEYH 350



 Score = 42.8 bits (99), Expect = 0.089,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 27/99 (27%), Gaps = 14/99 (14%)

Query: 269 VPDYLLYQESATI-----YPNTGPYTAMVCGRSCLAGDIFGEFHFEK----PVKIGD--- 316
           +PD+    +   +        T    A +   +C +    G           + +G    
Sbjct: 454 LPDFWGLAQHFPVMPLDRLNTTPTNPASIWDITCDSDGEMGFNRELPLYLHDIDVGKEEY 513

Query: 317 RISFEDVAGYNINRKNWFNGINMPTIAVK--NVDGTIKA 353
            ++F     Y        N    PT  V   N DG    
Sbjct: 514 FLAFFLTGAYQEVLGMQHNLFTHPTECVINFNEDGGYHI 552


>gi|116511664|ref|YP_808880.1| alanine racemase [Lactococcus lactis subsp. cremoris SK11]
 gi|123125695|sp|Q030B4|ALR_LACLS RecName: Full=Alanine racemase
 gi|116107318|gb|ABJ72458.1| alanine racemase [Lactococcus lactis subsp. cremoris SK11]
          Length = 367

 Score = 42.8 bits (99), Expect = 0.089,   Method: Composition-based stats.
 Identities = 22/184 (11%), Positives = 58/184 (31%), Gaps = 9/184 (4%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDGTTSSSLYEV 63
           ++D + + NN++       N   ++  A+K  A    +  +   ++  + G   S+L E 
Sbjct: 12  IVDLKAIRNNIEKFKKHI-NPNAEIWPAVKADAYGHGSVEVSKAVSDLVGGFCVSNLDEA 70

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +        +           ++D   +   ++   +   L   K   Q+  +   L+I+
Sbjct: 71  IELRNHLVTKPILVLSGIVPEDVDIAAALNISLTAPS---LEWLKLVVQEEAELSDLKIH 127

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
             V      +   +   +    +  DK     + +    F            +   +  +
Sbjct: 128 IGVDSGMGRIGIRDVEEANQMIELADKYAINFEGI-FTHFATADMADETKFKNQQARFNK 186

Query: 184 KEFG 187
              G
Sbjct: 187 IMAG 190


>gi|298244439|ref|ZP_06968245.1| alanine racemase domain protein [Ktedonobacter racemifer DSM 44963]
 gi|297551920|gb|EFH85785.1| alanine racemase domain protein [Ktedonobacter racemifer DSM 44963]
          Length = 370

 Score = 42.8 bits (99), Expect = 0.093,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 59/212 (27%), Gaps = 15/212 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTS---S 58
           + TP  ++D   +  N+D  +   +   + +   LK   +  +   L             
Sbjct: 13  LDTPSMIVDLTLMEENIDRLMQRFREKKIHVRPHLKTVKSPELARRLLAAGAVGGCVAKV 72

Query: 59  SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT----IIFNTVSQLNKFKDKAQKL 114
           S  EVM   E          +  K      V          ++ ++     +      + 
Sbjct: 73  SEAEVM-AQEGIDDLLITTEIVGKPKLSRLVTLIQHHPRIKVVIDSFIGAQELNTALHEA 131

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHN-NCENKSFL 173
             +I + I+ +V  ++     P +    L   C       +  V G   H  +  +    
Sbjct: 132 QLEIDVLIDLNVGQNRC-GVLPGKEALTLAHYCSKLPHLHLVGVQGYEGHLQHIHSPEER 190

Query: 174 CFSAMLKNI-----EKEFGHFITQIEWISLGG 200
                           +       IE ++ GG
Sbjct: 191 TQRCHQAMRLLTETAAQLRFEGFPIEVVTTGG 222


>gi|149187270|ref|ZP_01865568.1| arginine decarboxylase [Vibrio shilonii AK1]
 gi|148838806|gb|EDL55745.1| arginine decarboxylase [Vibrio shilonii AK1]
          Length = 636

 Score = 42.8 bits (99), Expect = 0.095,   Method: Composition-based stats.
 Identities = 37/325 (11%), Positives = 83/325 (25%), Gaps = 51/325 (15%)

Query: 5   PYYLIDKQKLLNN----LDTALYIRKNAGV----KLLLALKCFAAWGMF-DTLNQYM--- 52
           P  +   Q +        D       + G      L+  +K      +    L       
Sbjct: 61  PALVRFPQIIHQRVHGICDAFNQAINDYGYNNEYLLVYPIKVNQQKDVVEQILASQAEAE 120

Query: 53  ---DGTTSSSLYEVM--LGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
               G  + S  E+M  L   +        N       +        L +   I+   +S
Sbjct: 121 TKQLGLEAGSKPELMAVLAMAQRASSVIVCNGYKDREYVRLALIGEKLGHKVFIVLEKLS 180

Query: 103 QLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFS-RLGEKCKDKIE--------S 153
           +L+    +A+ L+ K  + +   ++         +     + G      ++         
Sbjct: 181 ELDIVLKEAKALNVKPRVGLRIRLASQGAGKWQASGGEKSKFGLSASQVLQVVERLKAED 240

Query: 154 EIKNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYP 210
           +++ +  + FH   +    +              E       I +  +GGG+        
Sbjct: 241 QLEMLQLVHFHLGSQMANIRDVRNGVNEAARFYCELRKMSVPIAYFDVGGGLAVDYDGTR 300

Query: 211 VKDFCQR-----------------LKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISE 253
            +                      +    E+ +  I  E G ++  +   L T V+    
Sbjct: 301 SQSSSSMNYGLAEYARNIVSTVGDVCALYEESAPVIISESGRSLTAHHAVLITNVIGTES 360

Query: 254 NIKNLVIVDSSVEAHVPDYLLYQES 278
                V   S     +   +     
Sbjct: 361 YNVETVDAPSEDAPLLLQNMWQNWQ 385


>gi|56707576|ref|YP_169472.1| putative arginine decarboxylase [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110670047|ref|YP_666604.1| putative arginine decarboxylase [Francisella tularensis subsp.
           tularensis FSC198]
 gi|224456646|ref|ZP_03665119.1| putative arginine decarboxylase [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254370096|ref|ZP_04986102.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254874397|ref|ZP_05247107.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|56604068|emb|CAG45065.1| putative arginine decarboxylase [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110320380|emb|CAL08448.1| putative arginine decarboxylase [Francisella tularensis subsp.
           tularensis FSC198]
 gi|151568340|gb|EDN33994.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254840396|gb|EET18832.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282158733|gb|ADA78124.1| putative arginine decarboxylase [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 469

 Score = 42.8 bits (99), Expect = 0.096,   Method: Composition-based stats.
 Identities = 30/235 (12%), Positives = 62/235 (26%), Gaps = 25/235 (10%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMDG-- 54
           P  L  +  L N LD        A           L   +K      +   +  Y     
Sbjct: 52  PLVLYFEHILKNQLDKLYTSFGKAIDDFSYTCKYSLAYPIKVNPEQKIIKAIYDYHQHNQ 111

Query: 55  ----TTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK 110
                   +  E +                +KD     +      I +  +  +    + 
Sbjct: 112 VSLDYEVGTKSEFLAVLSTAAKTQKIICNGFKDLSFYKIAQLAAKIGYKIIIVIENISEI 171

Query: 111 AQK---LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-----VNGLM 162
                 L   + ++ +  +    F      + F     +  + I     N     +  L 
Sbjct: 172 NIIQDLLDNNVNIKFDFGIRTKPFDNCIHTQKFGLSLSQINECINFLKTNQLQQKLLLLH 231

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDF 214
            H   + KS     A ++ + + +         +E+I  GGG+     +Y    +
Sbjct: 232 SHIGSQIKSTDKVVANIQRLMRIYSELKSDFVNLEYIDFGGGLAVNYDEYDRPSY 286


>gi|306832114|ref|ZP_07465268.1| alanine racemase [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
 gi|304425553|gb|EFM28671.1| alanine racemase [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
          Length = 368

 Score = 42.4 bits (98), Expect = 0.096,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 32/99 (32%), Gaps = 7/99 (7%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYE 62
           +ID   +  N+D           K   A+ K  A    A  +   ++  +DG   S++ E
Sbjct: 12  VIDLDAICQNIDAVK--ANIPQDKKAFAVVKANAYGHGATSVAQAIHHLVDGFCVSNIDE 69

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTV 101
            +   E    ET          E+        T+   + 
Sbjct: 70  ALELREAGIEETILILGVIMPDEVALARDYHVTLTVASQ 108


>gi|288906075|ref|YP_003431297.1| alanine racemase [Streptococcus gallolyticus UCN34]
 gi|288732801|emb|CBI14377.1| Putative alanine racemase [Streptococcus gallolyticus UCN34]
          Length = 368

 Score = 42.4 bits (98), Expect = 0.096,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 32/99 (32%), Gaps = 7/99 (7%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYE 62
           +ID   +  N+D           K   A+ K  A    A  +   ++  +DG   S++ E
Sbjct: 12  VIDLDAICQNIDAVK--ANIPQDKKAFAVVKANAYGHGATSVAQAIHHLVDGFCVSNIDE 69

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTV 101
            +   E    ET          E+        T+   + 
Sbjct: 70  ALELREAGIEETILILGVIMPDEVALARDYHVTLTVASQ 108


>gi|148657962|ref|YP_001278167.1| alanine racemase domain-containing protein [Roseiflexus sp. RS-1]
 gi|148570072|gb|ABQ92217.1| alanine racemase domain protein [Roseiflexus sp. RS-1]
          Length = 349

 Score = 42.4 bits (98), Expect = 0.097,   Method: Composition-based stats.
 Identities = 26/213 (12%), Positives = 54/213 (25%), Gaps = 14/213 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  +ID  +L  N+          G+     +K      +    +     G T   L
Sbjct: 6   LDTPVAIIDLDRLERNIARFQTYLSQHGIANRPHIKTHKIPQIARMQMAAGAVGITCQKL 65

Query: 61  YEVM-LGHEKFGGETHAYN---VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
            E   +           YN    A  +           ++  ++V+ +    +       
Sbjct: 66  GEAEVMADAGIDDIFIPYNIIGAAKLERLTALARRVRLSVAADSVAVITGLGNAMAGTGL 125

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
           ++ + +               R   +   +  +     I    GL F       S     
Sbjct: 126 ELTVLVECDTG--------MGRCGVQTPAEAVELA-LLITRTPGLRFGGLMTYPSSPEIG 176

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY 209
             +    +        +E +S GG         
Sbjct: 177 PFMHEAVRLLRDRGIAVERVSGGGTAGMWRAHE 209


>gi|331015908|gb|EGH95964.1| hypothetical protein PLA106_07905 [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 378

 Score = 42.4 bits (98), Expect = 0.10,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 51/171 (29%), Gaps = 9/171 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  L+D  ++  N+          GV+L   +K   +  +    +     G T S+L
Sbjct: 8   LDTPVALLDMPRMQRNIQRMQQRMNELGVRLRPHVKTSKSLPVIQAQMAAGARGVTVSTL 67

Query: 61  YEVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
            E      +   +     A      D  +      C   I+ ++V         A     
Sbjct: 68  KEAEHCFAEGISDVFYAVAIAPGKLDQALKLRRIGCRLSILTDSVVAAQAI--VAFGQQH 125

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
               ++   +       +      + L E  +  +      + G+M H   
Sbjct: 126 DEQFQVWIEIDCDGHR-SGLTVEDNALIEVARTLV-EGGMQLRGVMTHAGS 174


>gi|213968918|ref|ZP_03397058.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
 gi|213926217|gb|EEB59772.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
          Length = 378

 Score = 42.4 bits (98), Expect = 0.10,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 51/171 (29%), Gaps = 9/171 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  L+D  ++  N+          GV+L   +K   +  +    +     G T S+L
Sbjct: 8   LDTPVALLDMPRMQRNIQRMQQRMNELGVRLRPHVKTSKSLPVIQAQMAAGARGVTVSTL 67

Query: 61  YEVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
            E      +   +     A      D  +      C   I+ ++V         A     
Sbjct: 68  KEAEHCFAEGISDVFYAVAIAPGKLDQALKLRRIGCRLSILTDSVVAAQAI--VAFGQQH 125

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
               ++   +       +      + L E  +  +      + G+M H   
Sbjct: 126 DEQFQVWIEIDCDGHR-SGLTVEDNALIEVARTLV-EGGMQLRGVMTHAGS 174


>gi|28870797|ref|NP_793416.1| hypothetical protein PSPTO_3640 [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|28854046|gb|AAO57111.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato
           str. DC3000]
          Length = 378

 Score = 42.4 bits (98), Expect = 0.10,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 51/171 (29%), Gaps = 9/171 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  L+D  ++  N+          GV+L   +K   +  +    +     G T S+L
Sbjct: 8   LDTPVALLDMPRMQRNIQRMQQRMNELGVRLRPHVKTSKSLPVIQAQMAAGARGVTVSTL 67

Query: 61  YEVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
            E      +   +     A      D  +      C   I+ ++V         A     
Sbjct: 68  KEAEHCFAEGISDVFYAVAIAPGKLDQALKLRRIGCRLSILTDSVVAAQAI--VAFGQQH 125

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
               ++   +       +      + L E  +  +      + G+M H   
Sbjct: 126 DEQFQVWIEIDCDGHR-SGLTVEDNALIEVARTLV-EGGMQLRGVMTHAGS 174


>gi|15672826|ref|NP_267000.1| alanine racemase [Lactococcus lactis subsp. lactis Il1403]
 gi|281491333|ref|YP_003353313.1| alanine racemase [Lactococcus lactis subsp. lactis KF147]
 gi|20137230|sp|Q9CH94|ALR_LACLA RecName: Full=Alanine racemase
 gi|12723770|gb|AAK04942.1|AE006318_5 alanine racemase [Lactococcus lactis subsp. lactis Il1403]
 gi|281375074|gb|ADA64592.1| Alanine racemase [Lactococcus lactis subsp. lactis KF147]
          Length = 367

 Score = 42.4 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 21/184 (11%), Positives = 56/184 (30%), Gaps = 9/184 (4%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDGTTSSSLYEV 63
           ++D + + NN++           ++  A+K  A    +  +   ++  + G   S+L E 
Sbjct: 12  IVDLKAIRNNIEKFKKHIH-PNAEIWPAVKADAYGHGSVEVSKAVSDLVGGFCVSNLDEA 70

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +        +           ++D   +   ++   +   L   K   Q+  +   L+I+
Sbjct: 71  IELRNHLVTKPILVLSGIVPEDVDIAAALNISLTAPS---LEWLKLVVQEEAELSDLKIH 127

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
             V      +   +   +    +  DK     + +    F                +  +
Sbjct: 128 IGVDSGMGRIGIRDVEEANQMIELADKYAINFEGI-FTHFATADMADDTKFKDQQARFNK 186

Query: 184 KEFG 187
              G
Sbjct: 187 IMAG 190


>gi|266619447|ref|ZP_06112382.1| alanine racemase domain protein [Clostridium hathewayi DSM 13479]
 gi|288869010|gb|EFD01309.1| alanine racemase domain protein [Clostridium hathewayi DSM 13479]
          Length = 371

 Score = 42.4 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 49/168 (29%), Gaps = 13/168 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           ++TP  +ID  K   N+         AG +L   +K           L     G T + +
Sbjct: 9   LETPCVVIDMAKAEENVIRMQAEADAAGCRLRPHIKTHKMPLFARMQLAHGAAGITCAKV 68

Query: 61  YEVMLGHEKFGGETHAYNVAY------KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114
            E        G +              K     A       +  +++       + A+  
Sbjct: 69  SEAE-VMADGGADDIFIAYPMVGGFRIKRAVALARRLKRLILAVDSMECAVPLNEAAKAA 127

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLM 162
              + +R+       +  +       ++  E  K+  +    N+ G+ 
Sbjct: 128 GITLEVRLEVDTGAKRTGVQR-----TKAAELAKEVHQLSNLNLTGIY 170


>gi|316934654|ref|YP_004109636.1| alanine racemase domain-containing protein [Rhodopseudomonas
           palustris DX-1]
 gi|315602368|gb|ADU44903.1| alanine racemase domain protein [Rhodopseudomonas palustris DX-1]
          Length = 360

 Score = 42.4 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 30/88 (34%), Gaps = 2/88 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           + TP  +ID  ++ +N+     +   AGV     +K   +  +          G T   L
Sbjct: 13  VGTPALVIDMDRVEHNIARIQALCDAAGVANRPHIKTHKSPLLAKMQIDAGARGITCQKL 72

Query: 61  YEVM-LGHEKFGGETHAYNVAYKDCEID 87
            E   +          +YN+  ++    
Sbjct: 73  GEAEVMADAGIDDILISYNLIGEEKMAR 100


>gi|283797687|ref|ZP_06346840.1| alanine racemase [Clostridium sp. M62/1]
 gi|291074583|gb|EFE11947.1| alanine racemase [Clostridium sp. M62/1]
          Length = 422

 Score = 42.4 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 33/333 (9%), Positives = 72/333 (21%), Gaps = 27/333 (8%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAA----WGMFDTLNQYM-DGTTSSSLYEV 63
           ID   + +N           G+K++ A+K  A           L Q   D     ++ E 
Sbjct: 14  IDLDTIRSNFAALRS-MAGPGIKIMPAVKANAYGHGIVESCRALEQAGADYLGVGNIDEA 72

Query: 64  MLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
           +L  E         +     +   D  +         +V         ++  H      +
Sbjct: 73  ILLRENGIQTPILIFAGNLVEEVADLYIRYSLIPTIFSVKAAQAISRLSKAEHP-----V 127

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
              +   +  L      F     +       +I+ +   M   +  +K         +  
Sbjct: 128 FLGIETGRGRLGVNAEEFPDFVRQTAALPGIKIEGIYSHMAAADWPDKPHEYADWQYRRF 187

Query: 183 E---KEFGHFITQIEWISLGG-----GIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
               +        + ++ L                             EK      L   
Sbjct: 188 LDGTRVLKELGLSVPFMQLANTPGSIAYPNLRLSGICPGRAVWGYSPLEKRDGHPALSFP 247

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH------VPDYLLYQESATIYPNTGPY 288
                +   +   V+          +     +        + D +    +          
Sbjct: 248 MKAWKSRLLMVKDVIGGKFGPGYQAVRLDVPKHIGVMAGGISDGISPNFANGGSVLLRGK 307

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321
              V    CL      +         GD +   
Sbjct: 308 RVPVASSICLEH-TILDLTDCPEAAEGDEVVLF 339


>gi|242371567|ref|ZP_04817141.1| alanine racemase [Staphylococcus epidermidis M23864:W1]
 gi|242350719|gb|EES42320.1| alanine racemase [Staphylococcus epidermidis M23864:W1]
          Length = 382

 Score = 42.4 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 37/336 (11%), Positives = 90/336 (26%), Gaps = 28/336 (8%)

Query: 5   PYYL-IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMD-GTTSS 58
           P YL ++   +L N      +  +    ++  +K  +    +  +   L ++       +
Sbjct: 8   PTYLNVNLDAILANYQIFDQL--HHNKTVISVIKANSYGLGSVRIAQHLMEHGASFFAVA 65

Query: 59  SLYEV-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
           +L E   L       +     V   +    A+       + +        K+  +   KK
Sbjct: 66  TLDEAIELRMHGIKAKILILGVIRTEDISKAIQHRVALTVPSKAWLKEAIKNIPEDNEKK 125

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
           + L           +     +      E      + E     G+  H    ++     + 
Sbjct: 126 LWLHAKLD----TGMGRLGMKDVEEYREVVDLIDKREHLVFEGVYTHFASADEPGDSMNE 181

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI 237
             +  +        +  +I           D    +  +        Y  Q   +  +  
Sbjct: 182 QFEFFKTVVNQV-EKPTYIHTQNSAASLLMDGQFCNAIRLGISLYGYYPSQYVKDHVKVH 240

Query: 238 VTNTTTLNTTVLDISE---NIKNLVIVDSSVEAHVPDYL--------LYQESATIYPNTG 286
           +  +  L + ++ +                    +   +          +     Y N  
Sbjct: 241 LRPSAQLVSEIVQVKTLKAGETVSYGRTFKATEEMRIAILPIGYADGYLRAMQGAYVNVN 300

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFED 322
            +   V GR C+   I       + VK+GD++   D
Sbjct: 301 GHQCEVVGRVCMDQTIL---RVPEDVKVGDKVILMD 333


>gi|289678897|ref|ZP_06499787.1| alanine racemase, N-terminal [Pseudomonas syringae pv. syringae
           FF5]
          Length = 337

 Score = 42.4 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 39/135 (28%), Gaps = 7/135 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSLY 61
            TP  L+D  ++ +N+          GV+L   +K      +    +     G T S+L 
Sbjct: 12  DTPVALLDVSRMQHNIQRMQQRMNELGVRLRPHVKTSKCLPVIQAQIAAGASGVTVSTLK 71

Query: 62  EVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKK 117
           E      +   +     A      +  +      C   I+ ++V+        A      
Sbjct: 72  EAEHCFAEGIDDVFYAVAIAPGKLEQALRLRRKGCRLSILTDSVTAARAI--VAFGQAHD 129

Query: 118 IGLRINPSVSYSKFI 132
               +   +      
Sbjct: 130 ERFDVWIEIDCDGHR 144


>gi|172062516|ref|YP_001810167.1| alanine racemase domain-containing protein [Burkholderia ambifaria
           MC40-6]
 gi|171995033|gb|ACB65951.1| alanine racemase domain protein [Burkholderia ambifaria MC40-6]
          Length = 376

 Score = 42.4 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 41/322 (12%), Positives = 79/322 (24%), Gaps = 31/322 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  LID  ++ NN+          GVK    +K      + D  +     G T S+L
Sbjct: 6   LNTPAALIDVDRMRNNIARMQAHLDALGVKFRPHVKTTKCQQVVDAQIAAGAQGITVSTL 65

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDA-----VLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E        G     Y V     ++              I+ +++   N   +      
Sbjct: 66  KEAEQFFAA-GVRDIVYAVGMIPAKLGQALALRRQGCDLKIVADSLQTANSIAE--FGRE 122

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF--- 172
                 +   V           RP   L       +      + G++ H     +     
Sbjct: 123 HGERFDVWIEVDVDGHR--SGIRPDDGLLIDVGRALVDGGMALGGVLAHAGSSYEYDTHD 180

Query: 173 ------LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226
                         +  +           +S+ G          +    +        + 
Sbjct: 181 ALVAIAEQERGRTVHAAERLRAAGLPCPVVSI-GSTPTALSATNLDGVTEVRAGVYVLFD 239

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286
           + ++     A+     ++ TTV+   E               + D      S        
Sbjct: 240 LVMHNIGVCALADIALSVLTTVIGHQEEKGWA----------IVDAGWMAMSRDRGTQRQ 289

Query: 287 PYTAMVCGRSCLAGDIFGEFHF 308
                        GD+ GE+  
Sbjct: 290 ARDFGYGQVCTEDGDVLGEYVM 311


>gi|330953813|gb|EGH54073.1| alanine racemase [Pseudomonas syringae Cit 7]
          Length = 378

 Score = 42.4 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/171 (11%), Positives = 46/171 (26%), Gaps = 9/171 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  L+D  ++ +N+          GV+L   +K      +    +     G T S+L
Sbjct: 8   LDTPVALLDVSRMQHNIQRMQQRMNELGVRLRPHVKTSKCLPVIQAQIAAGASGVTVSTL 67

Query: 61  YEVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
            E      +   +     A      +  +      C   ++ ++V+              
Sbjct: 68  KEAEHCFAEGIDDVFYAVAIAPGKLEQALRLRRKGCRLSLLTDSVAAARAI--VVFGQAH 125

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
                +   +                   +    +      + G+M H   
Sbjct: 126 DERFDVWIEIDCDGHRSGLTV--DDASLVEVARTLVDGGMQLRGVMTHAGS 174


>gi|159043441|ref|YP_001532235.1| alanine racemase domain-containing protein [Dinoroseobacter shibae
           DFL 12]
 gi|157911201|gb|ABV92634.1| alanine racemase domain protein [Dinoroseobacter shibae DFL 12]
          Length = 387

 Score = 42.4 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 27/214 (12%), Positives = 63/214 (29%), Gaps = 18/214 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTS-- 57
           I+TP  ++D   L  N+       K  GV+  +  K   +  +     +     G     
Sbjct: 27  IQTPCLVVDLDALERNVVKMGNFAKEMGVRHRVHGKMHKSVDVAKLQMELGGACGVCCQK 86

Query: 58  SSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA------ 111
            S  E      + G +    +   +D      L+    +    +  ++  ++ A      
Sbjct: 87  VSEAE---AFARGGIKDVLVSNQVRDPAKIDRLARIPRLGARAICCVDDIENVADLSAAA 143

Query: 112 --QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN 169
                  +  + I+                 ++  +       S ++   G M H +  +
Sbjct: 144 TKHGTQIECLVEIDCGAGRCGVTTTPAVVEIAKAIDAAPGLKFSGLQAYQGAMQHLDSYD 203

Query: 170 KS---FLCFSAMLKNIEKEFGHFITQIEWISLGG 200
           +         AM+K+          + + +  GG
Sbjct: 204 ERKAKIDIAVAMVKDAVDALKAEGLECDIVGGGG 237


>gi|10952530|gb|AAG24954.1|AF242414_1 unknown [Paenibacillus alginolyticus]
          Length = 226

 Score = 42.4 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 51/171 (29%), Gaps = 12/171 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTS--S 58
           ++TP  LID + +  N+     +    GVKL    K      +    +     G T    
Sbjct: 7   LETPCVLIDSEIMQRNIAAMAAVAAKHGVKLRPHAKTHKLPSVALRQITAGAVGVTVAKV 66

Query: 59  SLYEVMLGHEKFGGETHAY---NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           S  EVM      G    AY        +  +         +  ++++     ++ A +L 
Sbjct: 67  SEAEVMAAG-GVGSIFIAYPLVTPGKIERAVRLSQQIELIVGMDSLAGAQLLEETAARLG 125

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNN 166
             + +R+          L      F    E   +        + G+     
Sbjct: 126 ATLQVRLEID-----TGLRRTGVGFESALEVADEIARLPHLRLTGIYTFRG 171


>gi|170747958|ref|YP_001754218.1| alanine racemase domain-containing protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170654480|gb|ACB23535.1| alanine racemase domain protein [Methylobacterium radiotolerans JCM
           2831]
          Length = 373

 Score = 42.4 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/134 (12%), Positives = 32/134 (23%), Gaps = 8/134 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCF--AAWGMFDTLNQYMDGTTS-- 57
           + TP  L+D   L  N+D      K  G++     K    +   +         G     
Sbjct: 16  VDTPCLLVDLDALERNVDKLGRFMKAHGLRHRAHAKTHKSSDITVLQIERGGACGVCCQK 75

Query: 58  SSLYEVMLGHEKFGG---ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114
            S  E  L                    +            +  + +  ++     A K 
Sbjct: 76  VSEAEA-LVSAGIRDVLVSNQVVAPKKIERLAALATRARVLVCVDDLGNVDDLSAAAVKY 134

Query: 115 HKKIGLRINPSVSY 128
              +   +   V  
Sbjct: 135 GVTLECLVEIDVGA 148


>gi|260576176|ref|ZP_05844169.1| alanine racemase domain protein [Rhodobacter sp. SW2]
 gi|259021656|gb|EEW24959.1| alanine racemase domain protein [Rhodobacter sp. SW2]
          Length = 372

 Score = 42.4 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/154 (12%), Positives = 42/154 (27%), Gaps = 8/154 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTS--S 58
           ++TP  ++D   L  N+ +       AGV+L +  K   +  +    +     G      
Sbjct: 21  VQTPSLILDLDALEANIASMQSQADAAGVRLRVHGKMHKSAEIAQMQIAAGACGICCQKV 80

Query: 59  SLYEVMLGHEKFGGETHAY---NVAYKDCEIDAVLSNCDTIIF-NTVSQLNKFKDKAQKL 114
           S  E                       D      L     +   +  + + +    AQ+ 
Sbjct: 81  SEAEA-FARAGLRDILITNQVRGAVKTDRLARLPLLGARILTCVDDPANVAELSAAAQRH 139

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCK 148
             +I + +       +  +A    P         
Sbjct: 140 GTEIEVLVEIDCGAGRCGVAPDQAPGLAQAIVAA 173


>gi|282855759|ref|ZP_06265065.1| alanine racemase domain protein [Pyramidobacter piscolens W5455]
 gi|282586391|gb|EFB91653.1| alanine racemase domain protein [Pyramidobacter piscolens W5455]
          Length = 369

 Score = 42.4 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/133 (12%), Positives = 36/133 (27%), Gaps = 6/133 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           + TP  LID++ + +N+   L      G KL    K      +     +    G   + +
Sbjct: 6   LDTPSLLIDREIMRDNMRFMLDYAARHGAKLRPHTKTHKMPAVARLQVEMGARGIAVAKV 65

Query: 61  YEVML-GHEKFG----GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E      +                ++     A      +   ++   L   +       
Sbjct: 66  GEAEAMAADGLDDIFIANEIVGVQKWERIRALAQRGVTVSFGVDSPETLPGIQKVFSGAD 125

Query: 116 KKIGLRINPSVSY 128
           +   + I   V  
Sbjct: 126 RPAEVMIEIEVGE 138


>gi|291617494|ref|YP_003520236.1| Hypothetical Protein PANA_1941 [Pantoea ananatis LMG 20103]
 gi|291152524|gb|ADD77108.1| Hypothetical Protein PANA_1941 [Pantoea ananatis LMG 20103]
          Length = 388

 Score = 42.4 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 27/209 (12%), Positives = 55/209 (26%), Gaps = 10/209 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFD-TLNQYMDGTTSSSL 60
           I TPY L+DK K   N++      +    ++   LK           L       T S+L
Sbjct: 19  ITTPYLLLDKVKFERNINRLYQRIEGQRCQIRPHLKTLRTLQSAPYLLKASSSPATVSTL 78

Query: 61  YEVML-GHEKFGGETHAYNVAYKDCEIDAVLSN---CDTIIFNTVSQLNKFKDKAQKLHK 116
            E        F    +A  +A       A L        ++ ++++Q     D A +   
Sbjct: 79  AEAEAFVAAGFSNVLYAVGIAPAKLPRIAALRCSGKQVHVLLDSMAQAQAISDYALQHQV 138

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNG----LMFHNNCENKSF 172
              + I       +  +   +   + +              +             + +  
Sbjct: 139 TFSVFIEIDCDGHRGGIRPDDGTLAEIAGHLHQHGMVVEGVMTHAGESYHCRTPQDIQRA 198

Query: 173 LCFSAMLKNI-EKEFGHFITQIEWISLGG 200
                       +           +S+G 
Sbjct: 199 AQQECQAAITAAQHIRAAGIPCPVVSVGS 227


>gi|284107226|ref|ZP_06386367.1| Alanine racemase [Candidatus Poribacteria sp. WGA-A3]
 gi|283829973|gb|EFC34252.1| Alanine racemase [Candidatus Poribacteria sp. WGA-A3]
          Length = 386

 Score = 42.4 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 33/327 (10%), Positives = 84/327 (25%), Gaps = 15/327 (4%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-----GTTSSSLYE 62
           +ID   L +NL     +     V +L  +K       +  L + +          +S++E
Sbjct: 13  IIDLNALAHNLRELRRVLA-PRVDILAVIKANGYGHGYKALAEALSQLGVRRFGVASVHE 71

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
            +L  E    E           ++  ++        +    ++    +  +  +   + +
Sbjct: 72  GVLLREAGRLEDVIVMGGMLPGQVKDLVHANLIPTLSDADTMHALSREVSQHDRPYPIHV 131

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
                  +                    +  +    +     N     + L      + +
Sbjct: 132 KVDTGMRRLGFTTREVLPLLQSPAFSHLLSCQGLMTHLADADNPDPAFTLLQLDRFHETV 191

Query: 183 EKEFGHFITQIEW-ISLGGGIHFTDKDYPVKDFCQRLKEF--SEKYSVQIYLEPGEAIVT 239
                +         +    +        +      L  +  ++   V + L+P  ++ T
Sbjct: 192 SSLPANGPRPWRHAANTAAILWHPRAHLDMVRPGLLLYGYTPAQDRDVPVSLQPVLSLTT 251

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY-----TAMVCG 294
               L T       +  +L          +              NTG          + G
Sbjct: 252 KVVHLKTAGKGEPVSYGDLYRTRRDSRLAILPIGYAHGYNRRLSNTGEVIIHDRRFPIVG 311

Query: 295 RSCLAGDIFGEFHFEKPVKIGDRISFE 321
           R C+      +   +  +K GD +   
Sbjct: 312 RICMDM-TVVDVTDDPTIKQGDDVILM 337


>gi|239834636|ref|ZP_04682964.1| Serine racemase [Ochrobactrum intermedium LMG 3301]
 gi|239822699|gb|EEQ94268.1| Serine racemase [Ochrobactrum intermedium LMG 3301]
          Length = 418

 Score = 42.4 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 3/75 (4%)

Query: 2   IKTPYYL-IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSS 59
           I+TP Y+ ID+ +L+ NL         AGV+L   +K   +  + +   Q    G T+S 
Sbjct: 52  IQTP-YVEIDEDRLIRNLKEMQQKADKAGVRLRPHIKTHKSLMIANRQLQLGAIGVTASK 110

Query: 60  LYEVMLGHEKFGGET 74
             E ++  E      
Sbjct: 111 PDEALVFVEGGIPSV 125


>gi|117619060|ref|YP_857116.1| alanine racemase [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
 gi|117560467|gb|ABK37415.1| alanine racemase [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
          Length = 408

 Score = 42.1 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 45/340 (13%), Positives = 83/340 (24%), Gaps = 42/340 (12%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTL-----NQYMDGTTSSSLYEV 63
           +D     +N+ T      + G K+   +K  A     D L        +     +S  E 
Sbjct: 46  VDLGAFEHNIQTLKDRLGDKGPKICAIMKADAYGHGIDLLVPSVVKAGIPCIGIASNEEA 105

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
            +  EK          A    E++  L      +  ++       D AQ+ H  I + I 
Sbjct: 106 RVAREKGFTGRLMRVRAATPAEVEQALPYKMEELIGSLVSAQGIADIAQRHHTNIPVHI- 164

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEI-KNVNGLMFHNNCENKSFLCFSA----- 177
                        N    RL +  +D +     K +  +    +   +            
Sbjct: 165 ----ALNSAGMSRNGIDLRLADSKEDALAMLKLKGITPVGIMTHFPVEEKEDVKMGLAQF 220

Query: 178 ----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
                      +       I   +    +   D  + +      L               
Sbjct: 221 KLDSQWLLEAGKLDRSKITIHAANSFATLEVPDAYFDMVRPGGLL-------YGDSIPSY 273

Query: 234 GEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLL------YQESATIYPNTGP 287
            E          T V  ++       +          D  L      Y +      +   
Sbjct: 274 TEY--KRVMAFKTQVASVNHYPAGNTVGYDRTFTLKRDSWLANLPLGYSDGYRRALSNKA 331

Query: 288 Y------TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321
           Y         V G++ +   I  +    K VK GD +   
Sbjct: 332 YVLIQGQKVPVVGKTSMNT-IMVDVTDLKGVKPGDEVVLF 370


>gi|150376682|ref|YP_001313278.1| alanine racemase domain-containing protein [Sinorhizobium medicae
           WSM419]
 gi|150031229|gb|ABR63345.1| alanine racemase domain protein [Sinorhizobium medicae WSM419]
          Length = 352

 Score = 42.1 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 23/260 (8%), Positives = 62/260 (23%), Gaps = 18/260 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           I+TP  L+D      N+          G+++   +K      + +  L+    G T   +
Sbjct: 5   IETPAVLVDLDIARRNILAFQAYADRHGIRVRPHIKTHKLPQLAELQLDSGAIGITCQKV 64

Query: 61  YEVML---GHEKFGGETHAYN---VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114
            E      G  +       YN                   +++ +  + ++         
Sbjct: 65  TEAEAMVDGSARIKEVLITYNLLGEEKLARLARLSEKVTVSVVADNATVVDGLGAFFADA 124

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE--SEIKNVNGLMFHNNCENKSF 172
            K + + +  +            R       +        +    +              
Sbjct: 125 GKPMTVLVECNTGA--------ERCGVATPAEAARLAMRIAAAPGLRFGGLMTYPPADGA 176

Query: 173 LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE 232
                 +   ++       ++  ++ GG                R   +       +   
Sbjct: 177 ARVQTFMSEAKQLIEARGIEVPCVTSGGTPGMMQAAEAPVASEHRPGTYIY-NDRSLVAR 235

Query: 233 PGEAIVTNTTTLNTTVLDIS 252
              +      T+  TV+ + 
Sbjct: 236 GVASWDDCALTVLATVVSVP 255


>gi|62261120|gb|AAX77961.1| unknown protein [synthetic construct]
          Length = 504

 Score = 42.1 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 30/235 (12%), Positives = 62/235 (26%), Gaps = 25/235 (10%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMDG-- 54
           P  L  +  L N LD        A           L   +K      +   +  Y     
Sbjct: 78  PLVLYFEHILKNQLDKLYTSFGKAIDDFSYTCKYSLAYPIKVNPEQKIIKAIYDYHQHNQ 137

Query: 55  ----TTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK 110
                   +  E +                +KD     +      I +  +  +    + 
Sbjct: 138 VSLDYEVGTKSEFLAVLSTAAKTQKIICNGFKDLSFYKIAQLAAKIGYKIIIVIENISEI 197

Query: 111 AQK---LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN-----VNGLM 162
                 L   + ++ +  +    F      + F     +  + I     N     +  L 
Sbjct: 198 NIIQDLLDNNVNIKFDFGIRTKPFDNCIHTQKFGLSLSQINECINFLKTNQLQQKLLLLH 257

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDF 214
            H   + KS     A ++ + + +         +E+I  GGG+     +Y    +
Sbjct: 258 SHIGSQIKSTDKVVANIQRLMRIYSELKSDFVNLEYIDFGGGLAVNYDEYDRPSY 312


>gi|291530912|emb|CBK96497.1| alanine racemase [Eubacterium siraeum 70/3]
          Length = 379

 Score = 42.1 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 38/326 (11%), Positives = 84/326 (25%), Gaps = 19/326 (5%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDGTTSSS-LYEV 63
           ID   L +N +    + K   +  +  +K  A       +   L +        S L+E 
Sbjct: 12  IDLDALEHNYNEIKKLAKGKDILAV--VKANAYGHDDKAVCLKLQELGVKYYGVSNLWEG 69

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
               +     T        +   D +L    T    +V    +  D A     K+ + I 
Sbjct: 70  EKLRQHGITGTILTFGYTDEDYFDELLEYGITQTAGSVQYAKQLSDYAVSKGVKLPVHIK 129

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
            +   ++  +         +     D   +           ++ +           + + 
Sbjct: 130 VNTGMTRVGIDSQQEMLDIIAMPGLDCKAAY----THFAAADSLDPSDVEYTDRQQEKLM 185

Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243
           K        I   + GG I+  D    +      L      Y +++  +    +   +  
Sbjct: 186 KIAKDKGLLIHSQNSGGIIYHGDFGGDIVRAGVILYGHYPNYPLEVPFDMKSVMTVKSVV 245

Query: 244 LNTTVL--DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-----YTAMVCGRS 296
                +      +       +  +   V            + + G          V GR 
Sbjct: 246 SQLKTIPAGTQISYGRTYTAEKEMTVAVIPIGYADGYFRDFSSKGKMLINGVLCNVVGRV 305

Query: 297 CLAGDIFGEFHFEKPVKIGDRISFED 322
           C+      +      +K GD +    
Sbjct: 306 CMDQ-TIVDVSNVPDIKTGDIVYVYS 330


>gi|332716644|ref|YP_004444110.1| alanine racemase [Agrobacterium sp. H13-3]
 gi|325063329|gb|ADY67019.1| alanine racemase [Agrobacterium sp. H13-3]
          Length = 362

 Score = 42.1 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 26/207 (12%), Positives = 48/207 (23%), Gaps = 15/207 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTS--S 58
           I TP  +ID+ +L  N+  A       G+     +K      +     Q    G      
Sbjct: 15  ISTPMPVIDEDRLAANIARAQSYLDGHGMAFRPHIKTHKIPAIAKQQLQAGAIGINCQKV 74

Query: 59  SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT----IIFNTVSQLNKFKDKAQKL 114
           S  EV      F      YN+            N       ++ ++          A   
Sbjct: 75  SEAEV-FADAGFDDILITYNILGVAKLSRLRALNARIGQLSVVADSAVT---IAGLAGTF 130

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174
             +  L +               +    + +  +  + +   N  G              
Sbjct: 131 DAERPLSVLVECD--TGGKRCGVQTPDAVLQLAEKIVAAPGLNFKG--ILTYPAPGGAEK 186

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGG 201
               ++                S GG 
Sbjct: 187 VENFIRETMALLAEKGIDCPVRSSGGS 213


>gi|302390371|ref|YP_003826192.1| alanine racemase domain protein [Thermosediminibacter oceani DSM
          16646]
 gi|302200999|gb|ADL08569.1| alanine racemase domain protein [Thermosediminibacter oceani DSM
          16646]
          Length = 372

 Score = 42.1 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 30/81 (37%), Gaps = 2/81 (2%)

Query: 2  IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
          + TP +L+D   L  N+     I K  G +L   +K   +  +          G    +L
Sbjct: 6  LPTPVFLVDLDVLEQNIKETADIVKTYGKRLWPMVKTHKSTEIAAMQKAAGAEGFLVGTL 65

Query: 61 YEV-MLGHEKFGGETHAYNVA 80
           E   L  + F     AY VA
Sbjct: 66 LEAERLVEKGFNDIMLAYPVA 86


>gi|322378630|ref|ZP_08053066.1| arginine decarboxylase [Helicobacter suis HS1]
 gi|321148937|gb|EFX43401.1| arginine decarboxylase [Helicobacter suis HS1]
          Length = 624

 Score = 42.1 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 34/298 (11%), Positives = 85/298 (28%), Gaps = 53/298 (17%)

Query: 11  KQKLLNNLDTALYIRKNAG----VKLLLALKCFAAWG-MFDTLN-----QYMDGTTSSSL 60
           ++++    +      +        + +  LK       +   +      +   G  + S 
Sbjct: 56  EKQVKKLFNMFSSAIEQYHYSGAFRAVFPLKVNHMPYFVLPLVEISKHFEGHYGLEAGSK 115

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK---------- 110
            E++L               +KD E+  +     ++  +    +    +           
Sbjct: 116 AELILAMSYIHEGAPITVNGFKDKEMIELGFIAASMGADITLTIEGLSELKSILEVALEN 175

Query: 111 -----AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KN 157
                  +L  KIG+R+    S      A      ++ G    + +E+          + 
Sbjct: 176 NTTGENTRLCPKIGIRVRLHSSGVGV-WAKSTGIHAKFGLASTELLEAMHLLEAHGLLEQ 234

Query: 158 VNGLMFHNNCENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDY---- 209
           ++ + FH   +          LK     +          +  I++GGG+      +    
Sbjct: 235 LSMIHFHIGSQISDITPLKKALKEAGNIYAELRKMGAFNLNSINIGGGLAIEYSQHKHRC 294

Query: 210 -----------PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                       V    + + +  ++    I++E G  I  +   L   VL++     
Sbjct: 295 GRNYTLEEFAGDVVFLLKEIVKNKKELEPNIFIESGRFISASHAVLVAPVLELFSQDY 352


>gi|304317133|ref|YP_003852278.1| alanine racemase domain protein [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778635|gb|ADL69194.1| alanine racemase domain protein [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 393

 Score = 42.1 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/191 (10%), Positives = 52/191 (27%), Gaps = 7/191 (3%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA-AWGMFDTLNQYMD-GTTSSSLYEVM 64
           Y++D   +  N            + L    K F     +   + +       +  + E  
Sbjct: 31  YVLDLDSIYENAKLLKEAANKNNIILYYMTKQFGRNPIVAKIIEEAGIEKAVAVDIDEAK 90

Query: 65  LGHE---KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           + ++   K G   H   +   D  + ++  + D I   +  +  +  D A+KL  +  + 
Sbjct: 91  ILYKNGLKIGHIGHLVQIPKNDI-MASLKMHPDVITCFSYDKAAELSDIAEKLGIRQNIL 149

Query: 122 INPSVSYSKFILADPNR-PFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +                     L +   + +  +  ++ G+                   
Sbjct: 150 LRVIDDKDDIYPGQYGGIKLKDLRKIASNILRLKNIDIVGITSFPCFLYDYNSRKIKATH 209

Query: 181 NIEKEFGHFIT 191
           N E        
Sbjct: 210 NAETLLRAKNI 220


>gi|218281653|ref|ZP_03488054.1| hypothetical protein EUBIFOR_00621 [Eubacterium biforme DSM 3989]
 gi|218217260|gb|EEC90798.1| hypothetical protein EUBIFOR_00621 [Eubacterium biforme DSM 3989]
          Length = 383

 Score = 42.1 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 34/343 (9%), Positives = 81/343 (23%), Gaps = 34/343 (9%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYM-DGTTSSSLYEV 63
           ID   + +N+     + KN  +  +  +K  A           L +   D    SS+ E 
Sbjct: 12  IDYDAIRHNVKEVKKLVKNTKIMGI--VKANAYGLGDVACAKALQKCGVDYFGVSSIDEA 69

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +        +               +          ++    +    A++   KI     
Sbjct: 70  LNLRNAGIQDNILILGYTPSMHFHYLHEQNIVQSLVSIEYARELNAYAKENDVKIRCHCK 129

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFL-----CFSAM 178
                 +  +    +         + ++E+         F  +                +
Sbjct: 130 VDTGMCRTGIVYQEQDKHIEDIYEEYRLENLCVEGIFSHFPVSDCLDEDCTEFTKKQIQL 189

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ--RLKEFSEKYSVQIYLEPGEA 236
              +               L       +      ++C+   L                + 
Sbjct: 190 FDEVIDLLKSQGIDPGIRHLQNSYGILNYPELEYEYCRPGLLYMGVTSDDHIKIKTNPDF 249

Query: 237 IVTNTTTLNTTVL--------------DISENIKNLVIVDSSVEAHVPDYLLYQESATIY 282
           I   +   N +++               I+E    +  +       +P  L  Q    + 
Sbjct: 250 IPIMSMYANVSLVKWIYPGQSVSYGRHFIAEKPTKVATMSIGYADGLPRLLSNQGFEVLV 309

Query: 283 PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
                    + G  C+   +  +    + VK GD +    V  
Sbjct: 310 HG---QRCKLIGNLCMDQCMI-DVTEVEDVKEGDVVCI--VGH 346


>gi|87122819|ref|ZP_01078691.1| putative threonine aldolase [Marinomonas sp. MED121]
 gi|86161925|gb|EAQ63218.1| putative threonine aldolase [Marinomonas sp. MED121]
          Length = 382

 Score = 42.1 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 69/232 (29%), Gaps = 16/232 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD--GTTS-- 57
           I+TP  ++D   L  N+ T     K+ GV+  +  K   +  +     Q  D  G     
Sbjct: 24  IQTPCLVVDLDALEKNIKTMGQYAKDMGVRHRVHGKMHKSVDIALLQEQLGDSCGVCCQK 83

Query: 58  SSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA------ 111
            S  EV     + G +    +   +D      L+    +   T+  ++  ++ A      
Sbjct: 84  VSEAEV---FARGGIKDVLVSNQVRDPAKIDRLARMPKLGARTICCVDDIENVAELAAAV 140

Query: 112 --QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN 169
                  +  + I+            P    ++          S I+   G M H     
Sbjct: 141 AKHDTQIECLVEIDCGAGRCGVQAGQPVVDIAKAIAATPGLKFSGIQAYQGAMQHMESYA 200

Query: 170 KSFLCFSAMLKNIEKEFGHFITQ-IEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                    ++ + +       + +E   +GGG   +            L+ 
Sbjct: 201 DRKEKIDIAVEMVARSIEMLKAEGLECDIVGGGGTGSYYFEGNSGVFNELQC 252


>gi|315425297|dbj|BAJ46964.1| alanine racemase domain protein [Candidatus Caldiarchaeum
           subterraneum]
          Length = 360

 Score = 42.1 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 42/333 (12%), Positives = 100/333 (30%), Gaps = 28/333 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSSL 60
           I TP  ++D + L  N+       ++ G KL   +K      +     +   DG     L
Sbjct: 6   IDTPALIVDVKVLKRNITEMADFARSLGKKLRPHVKTHKTPEIAWMQMEAGADGICVQKL 65

Query: 61  YEVMLGHEKFGGETHAYNV----AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
            E  +  E    +    N           +        ++  + V  +++     ++   
Sbjct: 66  GEAEVMAEAGLDDILVSNEVVGVQKMHRLVKLAEKVKLSVAVDDVENVSELGRFCRENGV 125

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
           ++G+ ++      +  +         L EK        +  + G   H            
Sbjct: 126 EVGVYVDVDCGMHRTGVPPEKAW--LLAEKVTRTEGVYLVGLMGYEGHAGSPTSREERHK 183

Query: 177 AMLK------NIEKEFGHFITQIEWISLGGG--IHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
            + +      +  K   +   +   +S+G    +  + +   V +    +  F++ Y V+
Sbjct: 184 LIEEAVKATLHAAKLMKNNGIEPGEVSMGSSATVRVSGRYEGVTELQPGMYVFNDWYLVE 243

Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY 288
                 E    +  T   +       + +       ++       +  E   IY  +  +
Sbjct: 244 REAATQETCALHVLTTVMSKTSPERCVVDAGSKAFHLDMGRYPVCVGVEGVEIYKLSEEH 303

Query: 289 -TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
               + G++               VK+GDR+ F
Sbjct: 304 GWVKLSGKAVD------------KVKLGDRLEF 324


>gi|62319461|dbj|BAD94828.1| diaminopimelate decarboxylase - like protein [Arabidopsis thaliana]
          Length = 43

 Score = 42.1 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 7/34 (20%), Positives = 15/34 (44%), Gaps = 1/34 (2%)

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIRE-FSYN 360
           ++  + +N    P       DG+I  IR   +++
Sbjct: 1   MSMASTYNLKMRPPEYWVEEDGSITKIRHAETFD 34


>gi|237799332|ref|ZP_04587793.1| hypothetical protein POR16_10901 [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331022188|gb|EGI02245.1| hypothetical protein POR16_10901 [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 381

 Score = 42.1 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 49/171 (28%), Gaps = 9/171 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  L+D  ++  N+          GV+L   +K   +  +    +     G T S+L
Sbjct: 11  LDTPVALLDVPRMQRNIQRMQQRMNELGVRLRPHVKTSKSLPVIQAQIAAGASGVTVSTL 70

Query: 61  YEVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
            E      +   +     A         +      C   I+ ++V         A     
Sbjct: 71  KEAAHCFAEGINDVFYAVAIAPGKLHQALKLRSDGCRLSILTDSVVAAQAI--VAFGQQH 128

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
                +   +       +      S L E  K  +      + G+M H   
Sbjct: 129 DERFEVWIEIDCDGHR-SGLAVEDSALTEVAKTLV-EGGMQLRGVMTHAGS 177


>gi|187931921|ref|YP_001891906.1| alanine racemase [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|226711044|sp|B2SHB9|ALR_FRATM RecName: Full=Alanine racemase
 gi|187712830|gb|ACD31127.1| alanine racemase [Francisella tularensis subsp. mediasiatica
           FSC147]
          Length = 365

 Score = 42.1 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 59/176 (33%), Gaps = 12/176 (6%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWG----MFDTLNQYMDGTTSSSLYEVM 64
           I KQ L NN+            K+   +K  A       + +  +  +D    ++  E  
Sbjct: 6   ISKQTLRNNIKIIREYIG--NAKMCFPVKANAYGHGIEDIVENTHDLVDFFAVANSLEAF 63

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       + V Y +  I+ ++S    +       + K +  A++L KK+   IN 
Sbjct: 64  RVTAVAKNPVLVFGVIYYEY-IEKMISENIRVSIQDYEDIEKLEQIAKELDKKVYAHINI 122

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +   ++  +   +          +   ES+   + G+  H  C +      +   K
Sbjct: 123 NTGMNRMGVNYNDAC-----RTIQRAYESDWLILEGVYSHLACADNRDHPTNIKQK 173


>gi|170780960|ref|YP_001709292.1| putative alanine racemase fusion protein [Clavibacter michiganensis
           subsp. sepedonicus]
 gi|169155528|emb|CAQ00640.1| putative alanine racemase fusion protein [Clavibacter michiganensis
           subsp. sepedonicus]
          Length = 578

 Score = 42.1 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 37/332 (11%), Positives = 74/332 (22%), Gaps = 25/332 (7%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA--------AWGMFDTLNQYMDGTTSSS 59
           +ID   + +N+ T   +   A   +  A+K  A        A    ++  + +     +S
Sbjct: 21  VIDLDAIRHNVRTLAALAAPARTMV--AVKADAYGHGALQVARAALESGAESLAVLDVAS 78

Query: 60  LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
             E+            A+          AV    D +  + + +L +     +    +  
Sbjct: 79  AVELRRA--GIDARLLAWLHGVDTDFRVAVEEEID-LGVSALWELKRIAAAGRATGIRAR 135

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           + +      S+        P         D       +       +          +   
Sbjct: 136 VHLKADTGLSRNGATPELWPDLVRAAVAADSAGELTLHALWSHLADASPEDDDAALARFR 195

Query: 180 K----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
           +      E         +   S G  +     D              +  S +       
Sbjct: 196 EAVRVAEELGARPVEKHLAASSAGIRLPAARFDMVRFGIAVYGISPFDDRSGRDLGLIPA 255

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPNTGPY-----T 289
             +         V         L    +     V            I             
Sbjct: 256 MTLEADVVSVKRVEAGHGVSYGLDHRTAGPSTLVLVPLGYADGIPRIAAPRASVLLNGRR 315

Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321
             V GR   A D       + PV++GD     
Sbjct: 316 FPVAGRI--AMDQLVLDVGDLPVEVGDTAVIL 345


>gi|46117817|ref|XP_384835.1| hypothetical protein FG04659.1 [Gibberella zeae PH-1]
          Length = 366

 Score = 42.1 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 23/211 (10%), Positives = 50/211 (23%), Gaps = 12/211 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           + TP  ++D   +  N+   +      G  +   LK   +  +   L      G   + L
Sbjct: 13  LDTPSMIVDLDVMEANIKKLMDRLLPTGRNIRPHLKTTKSAIIAKKLVAAGAKGGCVAKL 72

Query: 61  YEVMLG-HEKFGGETHAYNVAYKDCEID----AVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E        F        +                    I+ +         +      
Sbjct: 73  SEAEAITAAGFTDLLITCEIVGPAKVRRLVELFKKHQDLRIVVDDADAATAINNALANSG 132

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175
            +  + +   +                L        +  +  V G   H    +      
Sbjct: 133 SQDPINVLIDLDVGLHRTGVKPEGALPLARHIDTLKQMRLIGVQGYEGHLQHLHDFQDRK 192

Query: 176 SAMLKNI------EKEFGHFITQIEWISLGG 200
              L+++       +E       IE ++ GG
Sbjct: 193 EQCLESMRILTETAQELKKEGFNIEVVTTGG 223


>gi|315426064|dbj|BAJ47711.1| alanine racemase domain protein [Candidatus Caldiarchaeum
           subterraneum]
          Length = 366

 Score = 42.1 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 42/333 (12%), Positives = 100/333 (30%), Gaps = 28/333 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSSL 60
           I TP  ++D + L  N+       ++ G KL   +K      +     +   DG     L
Sbjct: 12  IDTPALIVDVKVLKRNITEMADFARSLGKKLRPHVKTHKTPEIAWMQMEAGADGICVQKL 71

Query: 61  YEVMLGHEKFGGETHAYNV----AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
            E  +  E    +    N           +        ++  + V  +++     ++   
Sbjct: 72  GEAEVMAEAGLDDILVSNEVVGVQKMHRLVKLAEKVKLSVAVDDVENVSELGRFCRENGV 131

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
           ++G+ ++      +  +         L EK        +  + G   H            
Sbjct: 132 EVGVYVDVDCGMHRTGVPPEKAW--LLAEKVTRTEGVYLVGLMGYEGHAGSPTSREERHK 189

Query: 177 AMLK------NIEKEFGHFITQIEWISLGGG--IHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
            + +      +  K   +   +   +S+G    +  + +   V +    +  F++ Y V+
Sbjct: 190 LIEEAVKATLHAAKLMKNNGIEPGEVSMGSSATVRVSGRYEGVTELQPGMYVFNDWYLVE 249

Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY 288
                 E    +  T   +       + +       ++       +  E   IY  +  +
Sbjct: 250 REAATQETCALHVLTTVMSKTSPERCVVDAGSKAFHLDMGRYPVCVGVEGVEIYKLSEEH 309

Query: 289 -TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
               + G++               VK+GDR+ F
Sbjct: 310 GWVKLSGKAVD------------KVKLGDRLEF 330


>gi|118590603|ref|ZP_01548004.1| threonine aldolase, low-specificity [Stappia aggregata IAM 12614]
 gi|118436579|gb|EAV43219.1| threonine aldolase, low-specificity [Stappia aggregata IAM 12614]
          Length = 387

 Score = 42.1 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 24/196 (12%), Positives = 54/196 (27%), Gaps = 13/196 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTS-- 57
           I+TP  ++D   L  N+       K  G++  +  K   +  +     +     G     
Sbjct: 27  IQTPCLVLDLDALERNIKKMGDYAKAHGMRHRVHGKMHKSVDVAKLQERLGGAVGVCCQK 86

Query: 58  SSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            S  EV     + G +    +   +D      L+        T+  ++   + A      
Sbjct: 87  VSEAEV---FARGGIKDILVSNQVRDKAKIDRLARLPKFGCRTIVCVDDLANVADLSEAA 143

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
           +        +  +  +          G    D +    K V+          +++     
Sbjct: 144 VK-----HGTTLEVFIEIDCGAGRC-GVTTSDAVVEIAKAVDAASNLKFTGIQAYQGAMQ 197

Query: 178 MLKNIEKEFGHFITQI 193
            + + E         I
Sbjct: 198 HIDSFEARKEKLDIAI 213


>gi|322379882|ref|ZP_08054168.1| arginine decarboxylase [Helicobacter suis HS5]
 gi|321147677|gb|EFX42291.1| arginine decarboxylase [Helicobacter suis HS5]
          Length = 624

 Score = 42.1 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 35/298 (11%), Positives = 86/298 (28%), Gaps = 53/298 (17%)

Query: 11  KQKLLNNLDTALYIRKNAG----VKLLLALKCFAAWG-MFDTLN-----QYMDGTTSSSL 60
           ++++    +      +        + +  LK       +   +      +   G  + S 
Sbjct: 56  EKQVKKLFNMFSSAIEQYHYSGAFRAVFPLKVNHMPYFVLPLVEISKHFEGHYGLEAGSK 115

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK---------- 110
            E++L               +KD E+  +     ++  +    +    +           
Sbjct: 116 AELILAMSYIHEGAPITVNGFKDKEMIELGFIAASMGADITLTIEGLSELKSILEVALEN 175

Query: 111 -----AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--------KN 157
                  +L  KIG+R+    S    I A      ++ G    + +E+          + 
Sbjct: 176 NTTGENTRLCPKIGIRVRLHSSGVG-IWAKSTGIHAKFGLASTELLEAMHLLEAHGLLEQ 234

Query: 158 VNGLMFHNNCENKSFLCFSAMLKNIEKEFGH----FITQIEWISLGGGIHFTDKDY---- 209
           ++ + FH   +          LK     +          +  I++GGG+      +    
Sbjct: 235 LSMIHFHIGSQISDITPLKKALKEAGNIYAELRKMGAFNLNSINIGGGLAIEYSQHKHRC 294

Query: 210 -----------PVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIK 256
                       V    + + +  ++    I++E G  I  +   L   VL++     
Sbjct: 295 GRNYTLEEFAGDVVFLLKEIVKNKKELEPNIFIESGRFISASHAVLVAPVLELFSQDY 352


>gi|307306768|ref|ZP_07586509.1| alanine racemase domain protein [Sinorhizobium meliloti BL225C]
 gi|306902059|gb|EFN32657.1| alanine racemase domain protein [Sinorhizobium meliloti BL225C]
          Length = 352

 Score = 41.7 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 27/258 (10%), Positives = 66/258 (25%), Gaps = 14/258 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           I+TP  L+D      N+          G+++   +K      M +  L+    G T   +
Sbjct: 5   IETPAVLVDLDIARRNVLAFQAYADRHGIRVRPHIKTHKLPQMAELQLDAGAIGITCQKV 64

Query: 61  YEVML---GHEKFGGETHAYN---VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114
            E      G  +       YN                   +++ +  + ++         
Sbjct: 65  TEAEAMVDGGARIKDVLITYNLLGEQKLARLARLNERVTVSVVADNATVVDGLAAFFADA 124

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174
            K + + +  +         D     +        +  +E   +                
Sbjct: 125 GKPLTVLVECNTGA------DRCGVGTPSEAARLARRIAEAPGLRFGGLMTYPPADGAAR 178

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
             A + + ++       ++  I+ GG                R   +       +     
Sbjct: 179 VQAFMSDAKRLIEAEGLEVPCITSGGTPGMMQAAEAPIASEHRPGTYIY-NDRSLVARGV 237

Query: 235 EAIVTNTTTLNTTVLDIS 252
            +      T+  TV+ + 
Sbjct: 238 ASWEDCALTVLATVVSVP 255


>gi|16264461|ref|NP_437253.1| putative amino acid processing enzyme, low specificity D-threonine
           aldolase protein [Sinorhizobium meliloti 1021]
 gi|15140598|emb|CAC49113.1| amino acid aldolase or racemase [Sinorhizobium meliloti 1021]
          Length = 352

 Score = 41.7 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 27/258 (10%), Positives = 66/258 (25%), Gaps = 14/258 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           I+TP  L+D      N+          G+++   +K      M +  L+    G T   +
Sbjct: 5   IETPAVLVDLDIARRNVLAFQAYADRHGIRVRPHIKTHKLPQMAELQLDAGAIGITCQKV 64

Query: 61  YEVML---GHEKFGGETHAYN---VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114
            E      G  +       YN                   +++ +  + ++         
Sbjct: 65  TEAEAMVDGGARIKDVLITYNLLGEQKLARLARLNERVTVSVVADNATVVDGLAAFFADA 124

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174
            K + + +  +         D     +        +  +E   +                
Sbjct: 125 GKPLTVLVECNTGA------DRCGVGTPSEAARLARRIAEAPGLRFGGLMTYPPADGAAR 178

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
             A + + ++       ++  I+ GG                R   +       +     
Sbjct: 179 VQAFMSDAKRLIEAEGLEVPCITSGGTPGMMQAAEAPIASEHRPGTYIY-NDRSLVARGV 237

Query: 235 EAIVTNTTTLNTTVLDIS 252
            +      T+  TV+ + 
Sbjct: 238 ASWEDCALTVLATVVSVP 255


>gi|325979040|ref|YP_004288756.1| alanine racemase [Streptococcus gallolyticus subsp. gallolyticus
           ATCC BAA-2069]
 gi|325178968|emb|CBZ49012.1| Alanine racemase [Streptococcus gallolyticus subsp. gallolyticus
           ATCC BAA-2069]
          Length = 368

 Score = 41.7 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 31/99 (31%), Gaps = 7/99 (7%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFAAWG----MFDTLNQYMDGTTSSSLYE 62
           +ID   +  N+D           K   A+ K  A       +   ++  +DG   S++ E
Sbjct: 12  VIDLDAICQNIDAVK--ANIPQDKKAFAVVKANAYGHGATNVAQAIHHLVDGFCVSNIDE 69

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTV 101
            +   E    ET          E+        T+   + 
Sbjct: 70  ALELREAGIEETILILGVIMPDEVALARDYHVTLTVASQ 108


>gi|328957818|ref|YP_004375204.1| hypothetical protein CAR_c15290 [Carnobacterium sp. 17-4]
 gi|328674142|gb|AEB30188.1| conserved hypothetical protein [Carnobacterium sp. 17-4]
          Length = 385

 Score = 41.7 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 23/206 (11%), Positives = 56/206 (27%), Gaps = 11/206 (5%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALK-CFAAWGMFDTLNQYMD-GTTSSSLYEVM 64
           Y++D   +  N    +   K   ++L   LK       +   L +            E  
Sbjct: 31  YVLDLDIIRENAKKLIETAKKNDIELFFMLKQIGRNPTIAKMLVELGIKNAVVVDFREAK 90

Query: 65  LGHEKFGGETHAYNVAYKDCE--IDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
           +  E      +  ++         D ++     +   ++ +L      A+++  K  + +
Sbjct: 91  IMMENNIPLGNVGHLVQIPQMLLKDIMMYGSKYLTVYSLEKLQAINGLAKEIGIKQKILL 150

Query: 123 NPSVSYSKFILADPNRPFSR----LGEKCKDKIESEIKNVNGLMFHNNC---ENKSFLCF 175
                  +           +    L    K+    EI  V            E       
Sbjct: 151 RVVSDEDELYPGQYGGFTLKELPSLISLFKELKYIEISGVTSFPCFLYNAEKEILEPTHN 210

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGG 201
           +  +K  +K        I+ +++   
Sbjct: 211 TETVKAAKKLLEKEGITIQELNIPSA 236


>gi|254369512|ref|ZP_04985523.1| hypothetical protein FTAG_01386 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157122466|gb|EDO66601.1| hypothetical protein FTAG_01386 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 365

 Score = 41.7 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 59/176 (33%), Gaps = 12/176 (6%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWG----MFDTLNQYMDGTTSSSLYEVM 64
           I KQ L NN+            K+   +K  A       + +  +  +D    ++  E  
Sbjct: 6   ISKQTLRNNIKIIREYIG--NAKMCFPVKANAYGHGIEDIVENTHDLVDFFAVANSLEAF 63

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       + V Y +  I+ ++S    +       + K +  A++L KK+   IN 
Sbjct: 64  RVTAVAKNPVLVFGVIYYEY-IEKMISENIRVSIQDYEDIEKLEQIAKELDKKVYAHINI 122

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +   ++  +   +          +   ES+   + G+  H  C +      +   K
Sbjct: 123 NTGMNRMGVDYNDAC-----RTIQRAYESDWLILEGVYSHLACADNRDHPTNIKQK 173


>gi|255539084|ref|XP_002510607.1| ornithine decarboxylase, putative [Ricinus communis]
 gi|223551308|gb|EEF52794.1| ornithine decarboxylase, putative [Ricinus communis]
          Length = 78

 Score = 41.7 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 15/43 (34%)

Query: 22 LYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVM 64
           + R    V+ L A+KC        TL         +S  ++ 
Sbjct: 3  KWTRTLPMVRPLYAVKCNPEPTPVGTLATLGSNFDCASRADLK 45


>gi|123443312|ref|YP_001007286.1| hypothetical protein YE3103 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122090273|emb|CAL13139.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 391

 Score = 41.7 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 36/307 (11%), Positives = 75/307 (24%), Gaps = 19/307 (6%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA-AWGMFDTLNQYM-DGTTSSSLYEVM 64
           Y+ID  ++  N    L      G+ L L  K F     +   L +    G  +    E  
Sbjct: 31  YVIDVDQVKQNARLLLETATRYGITLYLMSKQFGRNPLLCKLLLECGYQGIVAVDFKEAR 90

Query: 65  LGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
             ++      H  ++         + V    + I   ++ +  +    A + +K+  L +
Sbjct: 91  QLYQYNLPVAHVGHLVQIPSAMVDEVVSRQPEVITVYSIDKAREIAAAAVRQNKEQALLL 150

Query: 123 NPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIKNVNG-LMFHNN-----CENKSFLCF 175
                                L    ++        + G   F                 
Sbjct: 151 KVCHHGDLVYPGQEAGFSLDELPTVIREIKTIPGIRLVGVTHFPCMLFDNEKGKTLPSPN 210

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
            + L   +        Q+E ++              K      +            +PG 
Sbjct: 211 LSTLIEAKSILEQQGIQVEQVNGPSATGVESLPQLAKWGVTHAEPGHSLTGTMPSNQPGN 270

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGR 295
                     T V    +              H+ + L+Y +          + A V   
Sbjct: 271 QPEHVAMLYLTEVSHCHQGKSYCYGGGYYRRGHLSNALVYDQQW--------HAAKVVSP 322

Query: 296 SCLAGDI 302
           +  + D 
Sbjct: 323 ANDSIDY 329


>gi|54113967|gb|AAV29617.1| NT02FT0827 [synthetic construct]
          Length = 365

 Score = 41.7 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 59/176 (33%), Gaps = 12/176 (6%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWG----MFDTLNQYMDGTTSSSLYEVM 64
           I KQ L NN+            K+   +K  A       + +  +  +D    ++  E  
Sbjct: 6   ISKQTLRNNIKIIREYIG--NAKMCFPVKANAYGHGIEDIVENTHDLVDFFAVANSLEAF 63

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       + V Y +  I+ ++S    +       + K +  A++L KK+   IN 
Sbjct: 64  RVTAVAKNPVLVFGVIYYEY-IEKMISENIRVSIQDYEDIEKLEQIAKELDKKVYAHINI 122

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +   ++  +   +          +   ES+   + G+  H  C +      +   K
Sbjct: 123 NTGMNRMGVDYNDAC-----RTIQRAYESDWLILEGVYSHLACADNRDHPTNIKQK 173


>gi|315931021|gb|EFV09996.1| carboxynorspermidine decarboxylase domain protein [Campylobacter
           jejuni subsp. jejuni 327]
          Length = 38

 Score = 41.7 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 20/33 (60%)

Query: 330 RKNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
           +   FNGI +P + + +    ++ IREFSY DY
Sbjct: 2   KNTTFNGIRLPNLMLLDHKNELQMIREFSYKDY 34


>gi|134302328|ref|YP_001122297.1| alanine racemase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|172044165|sp|A4IZ25|ALR_FRATW RecName: Full=Alanine racemase
 gi|134050105|gb|ABO47176.1| alanine racemase [Francisella tularensis subsp. tularensis
           WY96-3418]
          Length = 365

 Score = 41.7 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 59/176 (33%), Gaps = 12/176 (6%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWG----MFDTLNQYMDGTTSSSLYEVM 64
           I KQ L NN+            K+   +K  A       + +  +  +D    ++  E  
Sbjct: 6   ISKQTLRNNIKIIREYIG--NAKMCFPVKANAYGHGIEDIVENTHDLVDFFAVANSLEAF 63

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       + V Y +  I+ ++S    +       + K +  A++L KK+   IN 
Sbjct: 64  RVTAVAKNPVLVFGVIYYEY-IEKMISENIRVSIQDYEDIEKLEQIAKELDKKVYAHINI 122

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +   ++  +   +          +   ES+   + G+  H  C +      +   K
Sbjct: 123 NTGMNRMGVDYNDAC-----RTIQRAYESDWLILEGVYSHLACADNRDHPTNIKQK 173


>gi|56707702|ref|YP_169598.1| alanine racemase [Francisella tularensis subsp. tularensis SCHU S4]
 gi|110670173|ref|YP_666730.1| alanine racemase [Francisella tularensis subsp. tularensis FSC198]
 gi|254370208|ref|ZP_04986214.1| alanine racemase [Francisella tularensis subsp. tularensis FSC033]
 gi|81820797|sp|Q5NH94|ALR_FRATT RecName: Full=Alanine racemase
 gi|123359566|sp|Q14IP6|ALR_FRAT1 RecName: Full=Alanine racemase
 gi|56604194|emb|CAG45206.1| alanine racemase [Francisella tularensis subsp. tularensis SCHU S4]
 gi|110320506|emb|CAL08589.1| alanine racemase [Francisella tularensis subsp. tularensis FSC198]
 gi|151568452|gb|EDN34106.1| alanine racemase [Francisella tularensis subsp. tularensis FSC033]
 gi|282158869|gb|ADA78260.1| alanine racemase [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 365

 Score = 41.7 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 59/176 (33%), Gaps = 12/176 (6%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWG----MFDTLNQYMDGTTSSSLYEVM 64
           I KQ L NN+            K+   +K  A       + +  +  +D    ++  E  
Sbjct: 6   ISKQTLRNNIKIIREYIG--NAKMCFPVKANAYGHGIEDIVENTHDLVDFFAVANSLEAF 63

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       + V Y +  I+ ++S    +       + K +  A++L KK+   IN 
Sbjct: 64  RVTAVAKNPVLVFGVIYYEY-IEKMISENIRVSIQDYEDIEKLEQIAKELDKKVYAHINI 122

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +   ++  +   +          +   ES+   + G+  H  C +      +   K
Sbjct: 123 NTGMNRMGVDYNDAC-----RTIQRAYESDWLILEGVYSHLACADNRDHPTNIKQK 173


>gi|229085084|ref|ZP_04217335.1| Alanine racemase [Bacillus cereus Rock3-44]
 gi|228698209|gb|EEL50943.1| Alanine racemase [Bacillus cereus Rock3-44]
          Length = 391

 Score = 41.7 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 31/337 (9%), Positives = 80/337 (23%), Gaps = 36/337 (10%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYM----DGTTSSSL 60
           ++   + +N+        +  + ++ A+K  A    A  +     +              
Sbjct: 13  VNLDAIKHNVREFKKRVNDENMTMMAAVKANAYGHGAVEVAKAAIEAGVNQLAVAFVDEG 72

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+             Y       +               +       + A++L KK  +
Sbjct: 73  IELREAGISVPILILGYTPVEAAKDAIEYDIMMTVYRIEDLKG---IDEVAKRLGKKARI 129

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNG--LMFHNNCEN--KSFLCFS 176
           ++          ++        +    ++    +   + G    +    E         +
Sbjct: 130 QVKID-----TGMSRIGLQEEEVAPFLEELKNMKHIEMEGVFTHYSTADEIDKTYTNMQT 184

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
            + +            + +I         +     ++  +        Y  Q        
Sbjct: 185 NLFEKAVTTAKEMGIHLPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSQEV-AHTVV 243

Query: 237 IVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATIYPNTGP---- 287
            +    +L + V  I    K           ++ E  +    +          +      
Sbjct: 244 SLQPALSLKSKVAHIKHAKKNRGVSYGNTYVATGEEWIATVPIGYADGYNRQLSNKGHAL 303

Query: 288 ---YTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISF 320
                  V GR C   D          PV++GD + F
Sbjct: 304 INGVRVPVLGRVC--MDQLMLDVTNAMPVQVGDEVVF 338


>gi|94500388|ref|ZP_01306920.1| alanine racemase [Oceanobacter sp. RED65]
 gi|94427423|gb|EAT12401.1| alanine racemase [Oceanobacter sp. RED65]
          Length = 365

 Score = 41.7 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 44/345 (12%), Positives = 90/345 (26%), Gaps = 34/345 (9%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDGTTSSSLYEV 63
           +ID + L +N   A  +   +    +  +K  A    A      L   +     +S+ E 
Sbjct: 8   IIDLEALRSNYRLADSLAPQSQSIAV--VKANAYGHGAVPCAKALEPIVPAFAVASIDEA 65

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
           +   E    +               + S  +  ++    + L   +    K      L+ 
Sbjct: 66  IELREGGIRKPILLLEGPFSFGEVQIASEHEFWLMIENHNHLAFIEQCEHKKLICKPLKC 125

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
              +      L       + + +K K       + V    F       + +   A +K  
Sbjct: 126 WLKMDSGMHRLGFMPFEIAAIYQKLKSTSIVHDEIVVATHFAT-----ADVEGDAFVKEQ 180

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTT 242
              F   I+ +  ++                   R        S     +  +  + +  
Sbjct: 181 IDCFNEAISGLGCLTSLCNSAGVMAWPQAHGSWNRPGFMLYGASPFELPQHNDKTLQSVM 240

Query: 243 TLNTTVLDISENIKNLVIVDSSVEAHVPD-------YLLYQESATIYPNTGP-----YTA 290
           TL + V+ +    K   +          D                   N  P        
Sbjct: 241 TLQSKVISVRNVKKGEAVGYGKTWIAQRDSRIATVTVGYGDGYPRHAKNGTPILVNNQRC 300

Query: 291 MVCGRSCLAGDIFGEFHFE-KPVKIGDRIS-------FEDVAGYN 327
            + GR   + D+      +   V IGD +          +VA Y+
Sbjct: 301 KLAGRV--SMDMITVDVTDVGSVNIGDDVICWGKDLPINEVAHYS 343


>gi|325001747|ref|ZP_08122859.1| metal-activated pyridoxal enzyme [Pseudonocardia sp. P1]
          Length = 336

 Score = 41.7 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 25/72 (34%), Gaps = 4/72 (5%)

Query: 4  TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSLYE 62
          TP  ++D   L  NL     +     ++    +K      +    L     G T +++ E
Sbjct: 8  TPALVVDASALEANLADMAAVLPGPRLRPH--VKAHKTTELSRRQLAHGHAGFTCATVRE 65

Query: 63 VM-LGHEKFGGE 73
          V  +     G +
Sbjct: 66 VEGMAAAGLGTD 77


>gi|114762422|ref|ZP_01441880.1| threonine aldolase, low-specificity [Pelagibaca bermudensis
           HTCC2601]
 gi|114545040|gb|EAU48044.1| threonine aldolase, low-specificity [Roseovarius sp. HTCC2601]
          Length = 387

 Score = 41.7 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 43/136 (31%), Gaps = 11/136 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTS-- 57
           I+TP  ++D   L  N+       K  G++     K   +  +     +     G     
Sbjct: 27  IQTPALVLDLDALERNVKKMGDYAKAHGMRHRAHGKMHKSVDVLKLQMELGGAAGVCCQK 86

Query: 58  SSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT-----IIFNTVSQLNKFKDKAQ 112
            S  EV         +    N      +ID +           +  + V+ + +  + AQ
Sbjct: 87  VSEAEV-FVRAGI-KDVLVSNQVRDPAKIDRLAQLPKHGSEITVCVDDVANVAELSEAAQ 144

Query: 113 KLHKKIGLRINPSVSY 128
           K   ++G+ +      
Sbjct: 145 KHGTELGIFVEIDCGA 160


>gi|297204429|ref|ZP_06921826.1| alanine racemase domain-containing protein [Streptomyces sviceus
          ATCC 29083]
 gi|197715830|gb|EDY59864.1| alanine racemase domain-containing protein [Streptomyces sviceus
          ATCC 29083]
          Length = 382

 Score = 41.7 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 29/84 (34%), Gaps = 3/84 (3%)

Query: 3  KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTSSSL 60
           TP+ ++D  K+  N++      +  GV L   +K   +  +   L+        T S+L
Sbjct: 8  DTPFAVVDVHKVRRNVERLATRAERLGVTLRPHVKTAKSLDVAALLHAGDRPCPVTVSTL 67

Query: 61 YEVMLGHEKFGGETHAYNVAYKDC 84
           E        G     Y V     
Sbjct: 68 AEAE-AFADGGYRDITYAVGIDPH 90


>gi|309812008|ref|ZP_07705774.1| alanine racemase, N-terminal domain protein [Dermacoccus sp.
          Ellin185]
 gi|308434066|gb|EFP57932.1| alanine racemase, N-terminal domain protein [Dermacoccus sp.
          Ellin185]
          Length = 200

 Score = 41.7 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 2/80 (2%)

Query: 1  MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSS 59
          M  TP  + D   L  N+D    + ++AGV L   +K      +          G T ++
Sbjct: 1  MTATPRLVADLDVLERNIDAMASLGRDAGVALRPHVKTHKMPEIATMQRDAATHGITVAT 60

Query: 60 LYEVML-GHEKFGGETHAYN 78
          + E  +     F   + AY 
Sbjct: 61 IGEAEVFVDAGFDDVSIAYP 80


>gi|303273406|ref|XP_003056064.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226462148|gb|EEH59440.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 602

 Score = 41.7 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 78/257 (30%), Gaps = 41/257 (15%)

Query: 49  NQYMDGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK-- 106
            +   G  + S  E++L  +            YKD +   +      +  NT   + K  
Sbjct: 121 AREGFGLEAGSKAELILSSDYSLPTPFLICNGYKDGDYVGLAVQSAALRVNTFIVIEKPS 180

Query: 107 ---FKDKAQ------KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE----- 152
              +   A            +G+R+  +  +S       +   ++ G   K+ I      
Sbjct: 181 DLQYYITAVGDLPRSAHRPFLGIRVRLTTGHSGHWG-PTSGDNAKFGLCAKEMIWLVASL 239

Query: 153 ---SEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTD 206
              S +  +  L FH   +  +   F   ++   + +         + ++ +GGG+    
Sbjct: 240 ADESMLDCLRLLHFHVGSQVSNIATFKEAMRESTQMYAELVRLGAPMGFVDVGGGLGVEY 299

Query: 207 K-----------DYPVKDFCQRLKEFSEKYSVQI-------YLEPGEAIVTNTTTLNTTV 248
                       +Y ++++   +    +   ++          E G AIV+    L   V
Sbjct: 300 HGSQGWGGQRSTNYDMQNYANDVVAALQDTIMRTGIKPPVLVTESGRAIVSAADVLIFEV 359

Query: 249 LDISENIKNLVIVDSSV 265
           +            D S 
Sbjct: 360 VSTEPRGAMPSFDDDSF 376


>gi|84514523|ref|ZP_01001887.1| threonine aldolase, low-specificity [Loktanella vestfoldensis
           SKA53]
 gi|84511574|gb|EAQ08027.1| threonine aldolase, low-specificity [Loktanella vestfoldensis
           SKA53]
          Length = 387

 Score = 41.7 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 45/150 (30%), Gaps = 19/150 (12%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TP  ++D   L  N+       K+ G++  +  K          +++ +D        
Sbjct: 27  IQTPCLVLDLDALERNIKKMGDFAKSHGMRHRVHGK----------MHKSVDVA------ 70

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
              L  EK GG          + E+ A     D ++ N V    K    A+         
Sbjct: 71  ---LLQEKLGGSVGVCCQKVSEAEVFARGGIKDVLVSNQVRHPAKIDRLARIPKLGARAI 127

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKI 151
                  +   L+   +      E   +  
Sbjct: 128 CCVDDIANIADLSAAAQKHGTQIECLVEID 157


>gi|255946227|ref|XP_002563881.1| Pc20g14030 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211588616|emb|CAP86732.1| Pc20g14030 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 367

 Score = 41.7 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 24/214 (11%), Positives = 52/214 (24%), Gaps = 17/214 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALK----CFAAWGMFDTLNQYMDGTTS 57
           + TP  + D   +  N+   +      G+ +   LK       A  M     +       
Sbjct: 13  LDTPSMIADLDLVEANIKKLMDKLLPTGLDIRPHLKTTKSAILADKMVKAGAKGGCVA-K 71

Query: 58  SSLYEVMLGHEKFGGETHAYNVAYKDCEID----AVLSNCDTIIFNTVSQLNKFKDKAQK 113
            S  EV+     F        +                    I+ ++ +           
Sbjct: 72  VSEAEVIAA-AGFDDLFITCEIIGPAKVQRLVELYRKHRKIRIVVDSEAGATAIDKALAA 130

Query: 114 LHKKIGLRINPSVSYSKFILADPNR-PFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF 172
                 + +   +             P   L    +     ++  ++G   H    +   
Sbjct: 131 AGIDEPISVLIDLDVGLHRTGVLPGDPAMTLARHVQGLKHLKLIGLHGYEGHLQHLHDKE 190

Query: 173 LCFSAMLKNI------EKEFGHFITQIEWISLGG 200
              S  L+++                IE ++ GG
Sbjct: 191 DRRSQCLQSMATLTNTADVLRKAGFNIEVVTTGG 224


>gi|221633166|ref|YP_002522391.1| Alanine racemase, N-terminal domain family [Thermomicrobium
          roseum DSM 5159]
 gi|221156807|gb|ACM05934.1| Alanine racemase, N-terminal domain family [Thermomicrobium
          roseum DSM 5159]
          Length = 370

 Score = 41.3 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 1/59 (1%)

Query: 1  MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSS 58
          ++ TP  ++D  +L  NL       +  G+ L   LK      +      +   G T +
Sbjct: 9  LLDTPCLVVDLDRLERNLAEMAEYARTHGLALRPHLKTHKTAEIARMQQAHGVVGFTCA 67


>gi|56460862|ref|YP_156143.1| amino acid aldolase or racemase [Idiomarina loihiensis L2TR]
 gi|56179872|gb|AAV82594.1| Predicted amino acid aldolase or racemase [Idiomarina loihiensis
           L2TR]
          Length = 375

 Score = 41.3 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 36/269 (13%), Positives = 75/269 (27%), Gaps = 22/269 (8%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-------DGT 55
            TPY LID+ KL +N++      ++ G  L              TL              
Sbjct: 12  DTPYLLIDEAKLKSNINYLKQRVESLGSHLR------PHLKTLRTLEAAGYLLDSKSAPA 65

Query: 56  TSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAV-----LSNCDTIIFNTVSQLNKFKDK 110
           T S+L E    + K G     Y V     ++  V           I+ + ++Q     D 
Sbjct: 66  TVSTLAEAE-AYAKAGYTDLLYAVGIAPAKLKRVAALRQQGINLHILLDNITQAQAVVDY 124

Query: 111 AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLM-FHNNCEN 169
           A +  +   + I       +  +   +     + +   +     + +  G    +     
Sbjct: 125 AAEFGQDFSVFIEIDSDDHRGGIKPSDSKLLTIAKTLGEHFTGLMTHAGGSYACNTEQGL 184

Query: 170 KSFLCFSAM-LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ 228
           K+F       ++                S+ G            D  +        + + 
Sbjct: 185 KNFAKQECDAVRIARNNLETAGIHCAITSV-GSTPTAHFGEDFSDISEVRAGVYTTFDLV 243

Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKN 257
           +             ++ TTV+  ++    
Sbjct: 244 MKNIGVCDFSHIAMSVVTTVIGHNKEKNW 272


>gi|210621786|ref|ZP_03292815.1| hypothetical protein CLOHIR_00760 [Clostridium hiranonis DSM 13275]
 gi|210154550|gb|EEA85556.1| hypothetical protein CLOHIR_00760 [Clostridium hiranonis DSM 13275]
          Length = 388

 Score = 41.3 bits (95), Expect = 0.22,   Method: Composition-based stats.
 Identities = 51/393 (12%), Positives = 104/393 (26%), Gaps = 57/393 (14%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLN----QYMDGTTSSSL 60
           ID      NL +   +  N G K+   +K  A    +  +  TL     +Y+  + +   
Sbjct: 15  IDLDAFKRNLKSIRKVLNN-GEKICGIVKADAYGHGSVEIAKTLEENDVEYLAVSRAEEA 73

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+     +       Y     +     ++ N       ++    K  + A++L     +
Sbjct: 74  MELRRKGLELPILILGYTP---EQRYRDIIRNDVMFTIYSMEDAVKLNEAAEELEMDAKV 130

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176
            I         +     +       + K   E +  ++ G+   F    E          
Sbjct: 131 HIKID----TGMNRLGFKVTEESICEIKKISEMDRISIKGIFTHFAAADEVDKSFTEMQG 186

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
              K +         ++  +         D D    D  +        Y     ++    
Sbjct: 187 EKFKYMLNRLKEEGVEVPLVHAANSAAIVDCDDLKFDMVRAGIIMYGCYPSDDIMK-ERV 245

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVE-----AHVPDYLLYQESATIYPNTGP---- 287
            V    T+ T V  I        I             +    +      +     P    
Sbjct: 246 PVEPVMTIKTRVSHIKTIEPGEKISYGCTYEAKEKERIATLAIGYADGFVRGRKNPKVCI 305

Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF----------- 334
                 V GR C+   +  +   +  +K+GD        G      + F           
Sbjct: 306 NGKDYEVVGRICMDQCMI-KIGMDDDIKVGDEAVVFGKGG---VSISEFAEDCGTISHEI 361

Query: 335 ---NGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
                  +P + +++ D     I+   Y+DY  
Sbjct: 362 MCNISRRIPRVFIEHED----IIK---YDDYLR 387


>gi|227328089|ref|ZP_03832113.1| hypothetical protein PcarcW_12445 [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 387

 Score = 41.3 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 39/134 (29%), Gaps = 7/134 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFD-TLNQYMDGTTSSSL 60
           ++TP+ LID+ +   N+D      +  G ++   LK   +       L       T S+L
Sbjct: 10  LETPFLLIDEFRFQRNIDRLYQRTEKLGSQIRPHLKTLRSIEAGRYLLKDAASPATVSTL 69

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCE-----IDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E        G     Y V     +               I+ ++  Q     D A    
Sbjct: 70  AEAE-AFANVGYTNLLYAVGIAPHKLPRIANLIHKGVNVHILLDSAEQARAVTDFALANS 128

Query: 116 KKIGLRINPSVSYS 129
               + I       
Sbjct: 129 VTFSVFIEIDCDGH 142


>gi|330972501|gb|EGH72567.1| alanine racemase [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 378

 Score = 41.3 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 42/133 (31%), Gaps = 5/133 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  L+D  ++ +N+          GV+L   +K      +    +     G T S+L
Sbjct: 8   LDTPVALLDVSRMQHNIQRMQQRMNELGVRLRPHVKTSKCLPVIQAQIAAGASGVTVSTL 67

Query: 61  YEVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
            E      +   +     A      +  +      C   I+ ++V+         Q   +
Sbjct: 68  KEAEHCFAEGIDDVFYAVAIAPGKLEQALRLRRKGCRLSILTDSVAAARAIAVFGQAHDE 127

Query: 117 KIGLRINPSVSYS 129
           +  + I       
Sbjct: 128 RFDVWIEIDCDGH 140


>gi|66046627|ref|YP_236468.1| alanine racemase, N-terminal [Pseudomonas syringae pv. syringae
           B728a]
 gi|63257334|gb|AAY38430.1| Alanine racemase, N-terminal [Pseudomonas syringae pv. syringae
           B728a]
          Length = 378

 Score = 41.3 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 42/133 (31%), Gaps = 5/133 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  L+D  ++ +N+          GV+L   +K      +    +     G T S+L
Sbjct: 8   LDTPVALLDVSRMQHNIQRMQQRMNELGVRLRPHVKTSKCLPVIQAQIAAGASGVTVSTL 67

Query: 61  YEVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
            E      +   +     A      +  +      C   I+ ++V+         Q   +
Sbjct: 68  KEAEHCFAEGIDDVFYAVAIAPGKLEQALRLRRKGCRLSILTDSVAAARAIAVFGQAHDE 127

Query: 117 KIGLRINPSVSYS 129
           +  + I       
Sbjct: 128 RFDVWIEIDCDGH 140


>gi|91976729|ref|YP_569388.1| alanine racemase-like [Rhodopseudomonas palustris BisB5]
 gi|91683185|gb|ABE39487.1| alanine racemase-like [Rhodopseudomonas palustris BisB5]
          Length = 360

 Score = 41.3 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 30/88 (34%), Gaps = 2/88 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           I TP  +ID  ++  N+     +   AGV     +K   +  +    +     G T   +
Sbjct: 13  IGTPALVIDMDRVERNIARVQALCDAAGVANRPHIKTHKSPLLAQMQIAAGARGITCQKI 72

Query: 61  YEVM-LGHEKFGGETHAYNVAYKDCEID 87
            E   +          +YN+  ++    
Sbjct: 73  GEAEVMADAGIDDILISYNLIGEEKMAR 100


>gi|153831634|ref|ZP_01984301.1| metal-activated pyridoxal enzyme [Vibrio harveyi HY01]
 gi|148872144|gb|EDL70961.1| metal-activated pyridoxal enzyme [Vibrio harveyi HY01]
          Length = 368

 Score = 41.3 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 21/209 (10%), Positives = 52/209 (24%), Gaps = 18/209 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           ++TP   +D  K+  N+        + G+ L    K      +          G   + L
Sbjct: 6   LETPSLFVDIDKMKTNIKAMQQRINDLGLTLRPHTKAHKIPAIAQMQLDAGAQGICVAKL 65

Query: 61  YEVM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCDT------IIFNTVSQLNKFKDKAQK 113
            E   +             +A +      +  + D        + +    + +    A  
Sbjct: 66  GEAEVMAQGGIKDILITTPIAGQKKIQRLITLHQDHPDARFIQVIDDYYHVVEIAKAASA 125

Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--KNVNGLMFHNNCENKS 171
            +  + L I               R   ++G+     I +      V+ +       +  
Sbjct: 126 ANLCVELMIEVESG--------QQRCGVQVGDDLVQLIHAIQITDGVSYVGLQAYSGHLQ 177

Query: 172 FLCFSAMLKNIEKEFGHFITQIEWISLGG 200
            +          +     +      +L  
Sbjct: 178 HVKGYCSRNEQARSVVVPLFDFITSTLEP 206


>gi|169628346|ref|YP_001701995.1| hypothetical protein MAB_1253c [Mycobacterium abscessus ATCC 19977]
 gi|169240313|emb|CAM61341.1| Conserved hypothetical protein (alanine racemase?) [Mycobacterium
           abscessus]
          Length = 360

 Score = 41.3 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 14/132 (10%), Positives = 38/132 (28%), Gaps = 6/132 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           + TP+  +D   +  N++      +  G++L    K      +          G T +++
Sbjct: 13  LDTPFLAVDLAVMDRNIERLAGRLRGTGIRLRPHAKSHKCIEIARRQIDSGAIGLTVATV 72

Query: 61  YEVML-GHEKFGGETHAY----NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E  +     F     AY                      +  ++ +   +  +    L 
Sbjct: 73  GEAEVFAEAGFIDLFIAYPLWVTAQKARRLRQVASRAALRVAVDSAAGAQQLAEHLGDLP 132

Query: 116 KKIGLRINPSVS 127
             + + ++    
Sbjct: 133 ITVVIEVDSGHH 144


>gi|145296605|ref|YP_001139426.1| hypothetical protein cgR_2513 [Corynebacterium glutamicum R]
 gi|140846525|dbj|BAF55524.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 380

 Score = 41.3 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 35/101 (34%), Gaps = 2/101 (1%)

Query: 1   MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSS 59
           MI TP  LID+++L  N+          G+ L   +K      +          G T ++
Sbjct: 39  MIDTPAVLIDRERLTANIFKMAAHAAANGIALRPHVKTHKIIEIAQMQVDAGARGITCAT 98

Query: 60  LYEVML-GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN 99
           + E  +     F     AY +   D  +  + +    I   
Sbjct: 99  VGEAEIFAGAGFTDIFIAYPLYLTDHAVQRLNAIPGAISIG 139


>gi|126733774|ref|ZP_01749521.1| threonine aldolase [Roseobacter sp. CCS2]
 gi|126716640|gb|EBA13504.1| threonine aldolase [Roseobacter sp. CCS2]
          Length = 387

 Score = 41.3 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 40/124 (32%), Gaps = 19/124 (15%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TP  ++D   L  N+       K+ G++  +  K          +++ +D        
Sbjct: 27  IQTPCLVLDLDALERNIKKMGDFAKSHGMRHRVHGK----------MHKSVDVA------ 70

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
              L  EK GG          + E+ A     D ++ N V Q  K    A+         
Sbjct: 71  ---LLQEKLGGSVGVCCQKVSEAEVFARGGIKDVLVSNQVRQPEKIDRLARLPKLGARAI 127

Query: 122 INPS 125
               
Sbjct: 128 CCVD 131


>gi|163731488|ref|ZP_02138935.1| threonine aldolase [Roseobacter litoralis Och 149]
 gi|161394942|gb|EDQ19264.1| threonine aldolase [Roseobacter litoralis Och 149]
          Length = 387

 Score = 41.3 bits (95), Expect = 0.26,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 40/124 (32%), Gaps = 19/124 (15%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TP  ++D   L  N+       K+ G++  +  K          +++ +D        
Sbjct: 27  IQTPCLVLDLDALERNIKKMGDFAKSHGMRHRVHGK----------MHKSVDVA------ 70

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
              L  E+ GG          + E+ A     D ++ N V Q  K    A+         
Sbjct: 71  ---LLQEELGGSVGVCCQKVSEAEVFARGGIKDVLVSNQVRQPEKIDRLARLPKLGARAI 127

Query: 122 INPS 125
               
Sbjct: 128 CCVD 131


>gi|297172025|gb|ADI23009.1| predicted amino acid aldolase or racemase [uncultured
           Planctomycetales bacterium HF0500_40D21]
 gi|297183364|gb|ADI19499.1| predicted amino acid aldolase or racemase [uncultured
           Planctomycetales bacterium HF0500_40D21]
          Length = 367

 Score = 41.3 bits (95), Expect = 0.26,   Method: Composition-based stats.
 Identities = 45/328 (13%), Positives = 78/328 (23%), Gaps = 23/328 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTS--S 58
           + TP   ID   +  N+          G +     KC     +          G T    
Sbjct: 14  LDTPSLCIDLDVMEANISRMASFMAERGKQWRPHEKCHKTPEIAHRQRAAGAIGVTCAKV 73

Query: 59  SLYEVMLGHEKFGG--ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
           S  EVM                            +    I  +  +Q         +   
Sbjct: 74  SEAEVMAAGGITDILVANMIVGAPKVQRVARLCETADPIIALDHFAQAQPLAAACHEAGV 133

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF- 175
              + +  +V     +   P R    L          ++  + G   H            
Sbjct: 134 TCRVILEINVG-LDRVGVLPGRDAIELARATAQLDGLQLVGIMGYEGHLLRVEDPDEKRT 192

Query: 176 -----SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY 230
                  +L+             + +S GG               +              
Sbjct: 193 LINASMRLLEETRDAMRDEGLCCDIVSAGGT-GSYQFTSDCPAITELQAGGGIFADPVYQ 251

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA 290
           L+ G   +    T+  TV  +S   KN  ++DS  +   PD  L      +    G    
Sbjct: 252 LQMGVTGLEYGLTVLATV--VSRPEKNRAVLDSGRKTLSPDAHL----PLVKDYPGTEVV 305

Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGDRI 318
            +    C       E      + IGD++
Sbjct: 306 RMSAEHCELS--LVEDS--VDLTIGDKV 329


>gi|270159139|ref|ZP_06187795.1| putative metal-activated pyridoxal enzyme [Legionella longbeachae
           D-4968]
 gi|289166027|ref|YP_003456165.1| alanine racemase [Legionella longbeachae NSW150]
 gi|269987478|gb|EEZ93733.1| putative metal-activated pyridoxal enzyme [Legionella longbeachae
           D-4968]
 gi|288859200|emb|CBJ13132.1| putative alanine racemase [Legionella longbeachae NSW150]
          Length = 374

 Score = 41.3 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 23/200 (11%), Positives = 48/200 (24%), Gaps = 11/200 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALY--IRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSS 58
           + TP  +IDK  L  NL+      I     +K     K      +     +Y   G   +
Sbjct: 13  LDTPCLVIDKNILKTNLEKMKKHGIENEINIKPH--CKTHKCSKLAGLQIEYGAIGVCVA 70

Query: 59  SLYEVM-LGHEKFGGETH---AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114
            + E   L  E+                   I  +     T++     +     ++A   
Sbjct: 71  KISEAEVLIKEEIPNILITSPVITKNKISRLIACLEKAPSTMVVVDSKENILALNEA-GA 129

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174
                + +   +                   + +      +  V      N     SF  
Sbjct: 130 RHNKRIHVLLDIDPGIGRTGIKPEHALNFARELQRLPWLHLMGVQCYA-GNLQHIPSFNE 188

Query: 175 FSAMLKNIEKEFGHFITQIE 194
                    +     +  ++
Sbjct: 189 RRERSLQTMQMASEVVKNLK 208


>gi|332160780|ref|YP_004297357.1| hypothetical protein YE105_C1158 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318604662|emb|CBY26160.1| protein containing an Alanine Racemase Domain [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|325665010|gb|ADZ41654.1| hypothetical protein YE105_C1158 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330860399|emb|CBX70708.1| uncharacterized protein yhfX [Yersinia enterocolitica W22703]
          Length = 391

 Score = 41.3 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 36/307 (11%), Positives = 76/307 (24%), Gaps = 19/307 (6%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA-AWGMFDTLNQYM-DGTTSSSLYEVM 64
           Y+ID  ++  N    L      G+ L L  K F     +   L +    G  +    EV 
Sbjct: 31  YVIDVDQVKQNARLLLETATRYGITLYLMSKQFGRNPLLCKLLLECGYQGIVAVDFKEVR 90

Query: 65  LGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
             ++      H  ++         + V    + I   ++ +  +    A + +K+  L +
Sbjct: 91  QLYQYNLPVAHVGHLVQIPSAMVDEVVSRQPEVITVYSIDKAREIAAAAVRQNKEQALLL 150

Query: 123 NPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIKNVNG-LMFHNN-----CENKSFLCF 175
                                L    ++        + G   F                 
Sbjct: 151 KVCHHGDLVYPGQEAGFSLDELPTVIREIKTIPGIRLVGVTHFPCMLFDNEKGKTLPSRN 210

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
            + L   +        Q+E ++              K      +            +PG 
Sbjct: 211 LSTLIEAKSILEQQGIQVEQVNGPSATGVESLPQLAKWGVTHAEPGHSLTGTMPSNQPGN 270

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGR 295
                     T V    ++             H+ + L+Y +          +   V   
Sbjct: 271 QPEHVAMLYLTEVSHCHQDKSYCYGGGYYRRGHLSNALVYDQQW--------HATNVVSP 322

Query: 296 SCLAGDI 302
           +  + D 
Sbjct: 323 ANDSIDY 329


>gi|224814618|gb|ACN65507.1| arginine decarboxylase 2 [Oryza sativa Japonica Group]
          Length = 629

 Score = 41.3 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 27/273 (9%), Positives = 66/273 (24%), Gaps = 42/273 (15%)

Query: 12  QKLLNNLDTALYIRKNAGVKLLLAL--------------KCFAAWGMFDTLNQYMD---- 53
             L N LD+       A      A               K      +   L  +      
Sbjct: 76  DVLKNRLDSLHAAFHGAVDSTGYASRYQGVFPIKVNQNKKVNQNKAVVQDLVTFGHGYSY 135

Query: 54  GTTSSSLYEVMLG---HEKFGGETHAYNVAYKDCEIDA------VLSNCDTIIFNTVSQL 104
           G  + S  E+++      K     +     YKD +  A       +     I+     +L
Sbjct: 136 GLEAGSKPELLIAMSCLAKAKPGAYLVCNGYKDADYVALALSARAMGLNAIIVLEMEEEL 195

Query: 105 NKFKDKAQKLHKKIGLRINPSVSY-SKFILADPNRPFSRLGEKCKDK--------IESEI 155
           +   +++ +L  +  + +   +                + G                 ++
Sbjct: 196 DIVVEQSARLGVEPVIGVRAKLLTKIPGHFGSTAGKHGKFGMLADKIYEVAGKLKKMGKL 255

Query: 156 KNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQ-----IEWISLGGGIHFTDKDYP 210
             +  L +H      +              +   + +     +  +  GGG+        
Sbjct: 256 HWLKLLHYHVGSMIPTTDIVYNAAAEAAGIYCALVKEHGATGMTTLDCGGGLGVDYDGTR 315

Query: 211 VKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243
                  +    E+Y+    ++       +   
Sbjct: 316 SGSSDMSVAYGLEQYA-SSIVQAVRLTCDDNGV 347


>gi|255020460|ref|ZP_05292525.1| alanine racemase [Acidithiobacillus caldus ATCC 51756]
 gi|254970070|gb|EET27567.1| alanine racemase [Acidithiobacillus caldus ATCC 51756]
          Length = 365

 Score = 41.3 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 39/336 (11%), Positives = 95/336 (28%), Gaps = 27/336 (8%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAA---WGMF--DTLNQYMDGTTSSSLYE 62
            I    L +N+  A    +  G KL+ A+K  A      +   +     ++G   +S+ E
Sbjct: 8   CISASALAHNVAVAR--ARMPGAKLMAAVKANAYGHGLAVCAPELARAGVEGFAVASMEE 65

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
               ++   G         +   EI    +    ++ +  +QL   +++       I ++
Sbjct: 66  AEQLYDLALGPSACLLAGPFAPGEIPLAAARGHILVIHRAAQLAWLQEQRWNRPLSIWIK 125

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
            +  +    F  +     F  L       ++S ++ +  +      +  +    +  ++ 
Sbjct: 126 FDSGMHRLGFAPSALGPVFEALA-----AVQSPLRILGLMSHLARSDTPNDPHNTRQIRE 180

Query: 182 IEKEFGHFITQI----EWISLGGGIHFTDKDYPVKDFCQRLK---EFSEKYSVQIYLEPG 234
                G +  +        + G  +   +  +P       L     F  +    + L P 
Sbjct: 181 FRAAIGQWGERTLGEHSLANSGAVLALGEARFPWMRPGLMLYGLSPFPGQTGRDLGLRPV 240

Query: 235 EAIVTNTTTLNTT-----VLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT 289
            +                +   +            V     D              G   
Sbjct: 241 LSWQAQIIATRRLAPGEWLGYGAAYQAPHEQRVGVVACGYGDGFDRHLGQGAPVWIGSQR 300

Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
           +   GR   + D+      +   + GD ++   V  
Sbjct: 301 SQTLGRV--SMDLLFVDLQDSDAQEGDWVTLMGVGA 334


>gi|110635638|ref|YP_675846.1| alanine racemase-like [Mesorhizobium sp. BNC1]
 gi|110286622|gb|ABG64681.1| alanine racemase-like protein [Chelativorans sp. BNC1]
          Length = 388

 Score = 41.3 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 36/137 (26%), Gaps = 13/137 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTS-- 57
           I+TP  ++D   L  N+       +  G++     K   +  +     +     G     
Sbjct: 28  IQTPCLILDLDALERNIKKMGDYARAHGMRHRAHGKMHKSVDVLKLQMELGGAIGVCCQK 87

Query: 58  SSLYEVMLGHEKFGGETHAYNVAYKDCEIDAV------LSNCDTIIFNTVSQLNKFKDKA 111
            S  EV      F  +    +   +D                  +  +  + +      A
Sbjct: 88  VSEAEV-FARAGF--KDILVSNQVRDAAKIDRLAKLPAYGARVIVCVDDPANVADLSAAA 144

Query: 112 QKLHKKIGLRINPSVSY 128
           QK    I   +      
Sbjct: 145 QKHGTVIECFVEIDCGA 161


>gi|326406390|gb|ADZ63461.1| alanine racemase [Lactococcus lactis subsp. lactis CV56]
          Length = 367

 Score = 40.9 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 21/184 (11%), Positives = 56/184 (30%), Gaps = 9/184 (4%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDGTTSSSLYEV 63
           ++D + + NN++           ++  A+K  A    +  +   ++  + G   S+L E 
Sbjct: 12  IVDLKAIRNNIEKFKKHIH-PNAEIWPAVKADAYGHGSVEVSKAVSDLVGGFCVSNLDEA 70

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +        +           ++D   +   ++   +   L   K   Q+  +   L+I+
Sbjct: 71  IELRNHLVTKPILVLSGIVQEDVDIAAALNISLTAPS---LEWLKLVVQEEAELSDLKIH 127

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
             V      +   +   +    +  DK     + +    F                +  +
Sbjct: 128 IGVDSGMGRIGIRDVEEANQMIELADKYAINFEGI-FTHFATADMADDTKFKDQQARFNK 186

Query: 184 KEFG 187
              G
Sbjct: 187 IMAG 190


>gi|326317869|ref|YP_004235541.1| alanine racemase domain-containing protein [Acidovorax avenae
           subsp. avenae ATCC 19860]
 gi|323374705|gb|ADX46974.1| alanine racemase domain protein [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 377

 Score = 40.9 bits (94), Expect = 0.28,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 50/180 (27%), Gaps = 11/180 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  LID Q++  N+       +  GV+     K      +    +     G T S+L
Sbjct: 7   LGTPSALIDTQRMERNIRRMQDRMQAMGVRFRPHAKTTKCLPVVQAQIAAGAQGITVSTL 66

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAV-----LSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E     E  G +   Y V     ++              II ++V+   +         
Sbjct: 67  KEAEQFFEA-GIQDILYAVGMVPGKLGQALALRQRGCQLKIITDSVAAAREIGR--FGAA 123

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175
                 +   +              + L  +  + +      V G++ H           
Sbjct: 124 HGAVFEVWIEIDTDGHRSGIKPEEDALL--QVANVLRDAGMVVGGVLAHAGSSYDHDDPQ 181


>gi|327393933|dbj|BAK11355.1| hypothetical protein PAJ_1275 [Pantoea ananatis AJ13355]
          Length = 388

 Score = 40.9 bits (94), Expect = 0.29,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 55/196 (28%), Gaps = 5/196 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFD-TLNQYMDGTTSSSL 60
           I TPY L+DK K   N++      +    ++   LK           L       T S+L
Sbjct: 19  ITTPYLLLDKVKFERNINRLYQRIEGQRCQIRPHLKTLRTLQSAPYLLKASSSPATVSTL 78

Query: 61  YEVML-GHEKFGGETHAYNVAYKDCEIDAVLSN---CDTIIFNTVSQLNKFKDKAQKLHK 116
            E        F    +A  +A       A L        ++ ++++Q     D A +   
Sbjct: 79  AEAEAFVAAGFSNVLYAVGIAPAKLPRIAALRCSGKQVHVLLDSMAQAQAISDYALQHQV 138

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
              + I       +  +   +   + +              +       +C     +  +
Sbjct: 139 TFSVFIEIDCDGHRGGIRPEDETLAEIAGHLHQHGMVVEGVMTHAGESYHCRTPQDIQRA 198

Query: 177 AMLKNIEKEFGHFITQ 192
           A  +           +
Sbjct: 199 AQQECQAVITAAQHIR 214


>gi|110680093|ref|YP_683100.1| threonine aldolase [Roseobacter denitrificans OCh 114]
 gi|109456209|gb|ABG32414.1| threonine aldolase [Roseobacter denitrificans OCh 114]
          Length = 387

 Score = 40.9 bits (94), Expect = 0.29,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 39/124 (31%), Gaps = 19/124 (15%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TP  ++D   L  N+       K  G++  +  K          +++ +D        
Sbjct: 27  IQTPCLVLDLDALERNIKKMGDFAKAHGMRHRVHGK----------MHKSVDVA------ 70

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
              L  E+ GG          + E+ A     D ++ N V Q  K    A+         
Sbjct: 71  ---LLQEELGGSVGVCCQKVSEAEVFARGGIKDVLVSNQVRQPEKIDRLARLPKLGARAI 127

Query: 122 INPS 125
               
Sbjct: 128 CCVD 131


>gi|126737976|ref|ZP_01753706.1| hypothetical protein RSK20926_20082 [Roseobacter sp. SK209-2-6]
 gi|126721369|gb|EBA18073.1| hypothetical protein RSK20926_20082 [Roseobacter sp. SK209-2-6]
          Length = 382

 Score = 40.9 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 29/84 (34%), Gaps = 2/84 (2%)

Query: 2  IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSL 60
          + TP  ++D+ K+  N+       +  GV L   LK   +  +   +     G  T S+L
Sbjct: 11 LPTPSLVVDEAKMRRNIKRQEKRVQALGVTLRPHLKTVKSVDIARQMLTGGTGPATVSTL 70

Query: 61 YEVMLGHEKFGGETHAYNVAYKDC 84
           E        G     Y V     
Sbjct: 71 EEAE-IFAAAGIRDIIYAVGIVPQ 93


>gi|89256641|ref|YP_514003.1| alanine racemase [Francisella tularensis subsp. holarctica LVS]
 gi|167011039|ref|ZP_02275970.1| alanine racemase [Francisella tularensis subsp. holarctica FSC200]
 gi|254367956|ref|ZP_04983976.1| alanine racemase [Francisella tularensis subsp. holarctica 257]
 gi|122500527|sp|Q2A2P9|ALR_FRATH RecName: Full=Alanine racemase
 gi|89144472|emb|CAJ79777.1| alanine racemase [Francisella tularensis subsp. holarctica LVS]
 gi|134253766|gb|EBA52860.1| alanine racemase [Francisella tularensis subsp. holarctica 257]
          Length = 365

 Score = 40.9 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 59/176 (33%), Gaps = 12/176 (6%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWG----MFDTLNQYMDGTTSSSLYEVM 64
           I KQ L NN+            K+   +K  A       + +  +  +D    ++  E  
Sbjct: 6   ISKQTLRNNIKIIREYIG--NAKMCFPVKANAYGHGIEDIVENTHDLVDFFAVANSLEAF 63

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       + V Y +  I+ ++S    +       + K +  A++L KK+   IN 
Sbjct: 64  RVTAVAKNPVLVFGVIYYEY-IEKMISENIRVSIQDYEYIEKLEQIAKELDKKVYAHINI 122

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +   ++  +   +          +   ES+   + G+  H  C +      +   K
Sbjct: 123 NTGMNRMGVDYNDAC-----RTIQRAYESDWLILEGVYSHLACADNRDHPTNIKQK 173


>gi|169656659|ref|YP_001428845.2| alanine racemase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|290953541|ref|ZP_06558162.1| alanine racemase [Francisella tularensis subsp. holarctica URFT1]
 gi|295313145|ref|ZP_06803827.1| alanine racemase [Francisella tularensis subsp. holarctica URFT1]
 gi|189027647|sp|A7ND36|ALR_FRATF RecName: Full=Alanine racemase
 gi|164551727|gb|ABU61889.2| alanine racemase [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 365

 Score = 40.9 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 59/176 (33%), Gaps = 12/176 (6%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWG----MFDTLNQYMDGTTSSSLYEVM 64
           I KQ L NN+            K+   +K  A       + +  +  +D    ++  E  
Sbjct: 6   ISKQTLRNNIKIIREYIG--NAKMCFPVKANAYGHGIEDIVENTHDLVDFFAVANSLEAF 63

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       + V Y +  I+ ++S    +       + K +  A++L KK+   IN 
Sbjct: 64  RVTAVAKNPVLVFGVIYYEY-IEKMISENIRVSIQDYEYIEKLEQIAKELDKKVYAHINI 122

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +   ++  +   +          +   ES+   + G+  H  C +      +   K
Sbjct: 123 NTGMNRMGVDYNDAC-----RTIQRAYESDWLILEGVYSHLACADNRDHPTNIKQK 173


>gi|86139515|ref|ZP_01058083.1| threonine aldolase, low-specificity [Roseobacter sp. MED193]
 gi|85823698|gb|EAQ43905.1| threonine aldolase, low-specificity [Roseobacter sp. MED193]
          Length = 388

 Score = 40.9 bits (94), Expect = 0.31,   Method: Composition-based stats.
 Identities = 27/214 (12%), Positives = 59/214 (27%), Gaps = 17/214 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTS-- 57
           I+TP  ++D   L  N+       K  G++     K   +  +     +     G     
Sbjct: 27  IQTPALVLDLDALERNIKKMGDYAKAHGMRHRAHGKMHKSVDVLKLQMEIGGAIGVCCQK 86

Query: 58  SSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLS------NCDTIIFNTVSQLNKFKDKA 111
            S  EV         E    N      +I  ++           +  + V+ +      A
Sbjct: 87  VSEAEV-FARAGI-KEILVSNQVRDPGKIARLVQLPKFSGGEVIVCVDDVASVADLSSAA 144

Query: 112 QKLHKKIGLRINPSVSY--SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN 169
           +    ++G+ I                    ++      +     I+   G M H +  +
Sbjct: 145 KNAGTELGVFIEIDCGAGRCGVTTTPAVVEIAKAVVAADNLTYRGIQAYQGAMQHMDSFD 204

Query: 170 KS---FLCFSAMLKNIEKEFGHFITQIEWISLGG 200
                       +++          + + +S GG
Sbjct: 205 DRKAKIDTAIRQVQDAVNALKDEGIETDLVSGGG 238


>gi|253688636|ref|YP_003017826.1| alanine racemase domain protein [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251755214|gb|ACT13290.1| alanine racemase domain protein [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 380

 Score = 40.9 bits (94), Expect = 0.32,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 44/134 (32%), Gaps = 7/134 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFD-TLNQYMDGTTSSSL 60
           ++TP+ LID+ +   N+D      +  G ++   LK   +       L       T S+L
Sbjct: 10  LETPFLLIDEFRFQRNIDRLYQRTEALGSRVRPHLKTLRSIEAGRYLLKDANSPATVSTL 69

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCD-----TIIFNTVSQLNKFKDKAQKLH 115
            E      K G     Y V     ++  + +         I+ ++  Q     D A+   
Sbjct: 70  AEAE-AFAKAGYTNLLYAVGIAPHKLPRIANLIRNGVNIHILLDSAEQAQAVVDFARANS 128

Query: 116 KKIGLRINPSVSYS 129
               + I       
Sbjct: 129 VTFSVFIEIDCDGH 142


>gi|254249069|ref|ZP_04942389.1| Alanine racemase [Burkholderia cenocepacia PC184]
 gi|124875570|gb|EAY65560.1| Alanine racemase [Burkholderia cenocepacia PC184]
          Length = 376

 Score = 40.9 bits (94), Expect = 0.32,   Method: Composition-based stats.
 Identities = 44/323 (13%), Positives = 87/323 (26%), Gaps = 33/323 (10%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  LID  ++  N+          GV+    +K      + D  +     G T S+L
Sbjct: 6   LNTPAALIDVARMQRNIARMQTHLDALGVRFRPHVKTTKCRQVVDVQIAAGAQGITVSTL 65

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDA-----VLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E        G     Y V     ++              I+ +++   +     A    
Sbjct: 66  KEAEQFFAH-GIRDIVYAVDMVPAKLGQALALRRQGCDLKIVADSLPAAHAI--AAFGRE 122

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF--- 172
                 +   V         P  P + L       +      + G++ H     +     
Sbjct: 123 HGERFDVWIEVDVDGHRSGIP--PDADLLIDVGRALTDGGMLLGGVLAHAGSSYEYDTPE 180

Query: 173 ------LCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226
                     +      +           +S+G          P     +RL   +E  +
Sbjct: 181 ALAAIAEQERSRTVRAAERLRAAGLPCPVVSIGST--------PTALAAERLDGVTEVRA 232

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286
               L   + ++ N      + + +S     +   +    A + D      S        
Sbjct: 233 GVYVL--FDLVMHNVGVCELSDIALSVLTTVIGHQEEKGWA-IVDAGWMAMSRDRGTQRQ 289

Query: 287 PYTAMVCGRSC-LAGDIFGEFHF 308
                  G+ C  AGD+ G++  
Sbjct: 290 ARDFG-YGQICTEAGDVLGDYLL 311


>gi|260430565|ref|ZP_05784538.1| metal-activated pyridoxal enzyme [Citreicella sp. SE45]
 gi|260418594|gb|EEX11851.1| metal-activated pyridoxal enzyme [Citreicella sp. SE45]
          Length = 387

 Score = 40.9 bits (94), Expect = 0.32,   Method: Composition-based stats.
 Identities = 20/199 (10%), Positives = 55/199 (27%), Gaps = 19/199 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMD-GTTSSS 59
           I+TP  ++D   L  N+       +  G++  +  K   +  +    +      G     
Sbjct: 27  IQTPCLVLDLDALERNIRKMGDYARAHGMRHRVHGKMHKSVDVAKLQMRLGGAIGVCCQK 86

Query: 60  LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNC-----DTIIFNTVSQLNKFKDKAQKL 114
           + E  +       +    N      +ID +           +  + ++ + +  + AQ+ 
Sbjct: 87  VSEAEVFVRGGIKDVLVSNQVRDPQKIDRLAGLPKLGAKIIVCVDDLANVAELSEAAQRH 146

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174
              +   +                   R G    + +    + ++          +++  
Sbjct: 147 GTTLECFVEIDCGA------------GRCGVTTAEAVVEIAQAIDAAEGLRFTGIQAYQG 194

Query: 175 FSAMLKNIEKEFGHFITQI 193
               L + E         I
Sbjct: 195 AMQHLDSYEARRDKLNAAI 213


>gi|115315060|ref|YP_763783.1| alanine racemase [Francisella tularensis subsp. holarctica OSU18]
 gi|122324934|sp|Q0BL88|ALR_FRATO RecName: Full=Alanine racemase
 gi|115129959|gb|ABI83146.1| alanine racemase [Francisella tularensis subsp. holarctica OSU18]
          Length = 365

 Score = 40.9 bits (94), Expect = 0.33,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 59/176 (33%), Gaps = 12/176 (6%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWG----MFDTLNQYMDGTTSSSLYEVM 64
           I KQ L NN+            K+   +K  A       + +  +  +D    ++  E  
Sbjct: 6   ISKQTLRNNIKIIREYIG--NAKMCFPVKANAYGHGIEDIVENTHDLVDFFAVANSLEAF 63

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINP 124
                       + V Y +  I+ ++S    +       + K +  A++L KK+   IN 
Sbjct: 64  RVTAVAKNPVLVFGVIYYEY-IEKMISENIRVSIQDYEYIEKLEQIAKELDKKVYAHINI 122

Query: 125 SVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
           +   ++  +   +          +   ES+   + G+  H  C +      +   K
Sbjct: 123 NTGMNRMGVDYNDAC-----RTIQRAYESDWLILEGVYSHLACADNRDHPTNIKQK 173


>gi|268591426|ref|ZP_06125647.1| alanine racemase [Providencia rettgeri DSM 1131]
 gi|291313080|gb|EFE53533.1| alanine racemase [Providencia rettgeri DSM 1131]
          Length = 360

 Score = 40.9 bits (94), Expect = 0.33,   Method: Composition-based stats.
 Identities = 21/211 (9%), Positives = 65/211 (30%), Gaps = 10/211 (4%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDGTTSSSLYEV 63
           LI+++ L +NL     I  N+ +  +  +K  A      G+   + + +DG   + L E 
Sbjct: 7   LINRRALRHNLQRVKEIAPNSQMIAV--VKANAYGHGLVGVGQAVEELVDGFGVARLNEA 64

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +L  +    +       + +     ++   +  I   +  + + +   +       L++ 
Sbjct: 65  LLLRQHGVIKPIVLLEGFFEQSDLLLM--AEHQIDTVIHCIEQLEML-EATKLPYPLKVW 121

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
             +      L    +       +   + +     +N +      +          +   +
Sbjct: 122 MKLDTGMHRLGILPKDAEGF-YQRLQRCQQVQLPINIVSHFCQADAPHLPTTEKQIACFK 180

Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDF 214
           +       +    +  G + + +  Y     
Sbjct: 181 QFIDGKEGEKSIAASAGILLWPEAHYDWVRP 211


>gi|254517892|ref|ZP_05129948.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
 gi|226911641|gb|EEH96842.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
          Length = 387

 Score = 40.9 bits (94), Expect = 0.33,   Method: Composition-based stats.
 Identities = 31/275 (11%), Positives = 70/275 (25%), Gaps = 12/275 (4%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALK-CFAAWGMFDTLNQYM-DGTTSSSLYEVM 64
           Y+ID   L+ N           G+KL    K       +     +   DG       E  
Sbjct: 31  YVIDLDTLIENAKKLKDEADKYGIKLYFMTKQIGRNPLICKEFMKLGYDGAVVVDFKEAE 90

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAV--LSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
           +  +      H  ++      +      S  D I   ++ +  +  +  ++L+ K  + +
Sbjct: 91  VMIDNGIKIGHVGHLVQIPKALIEKVVKSRPDYITVYSIEKAKEINEVCERLNIKQNIML 150

Query: 123 N----PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHN----NCENKSFLC 174
                    YS             +G +        +  V           + E K    
Sbjct: 151 RVLGENDNLYSGQYGGFKLNELKSIGSELVKLKNLNLAGVTSFPCFLFDEESNEIKRTNN 210

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
              + +  E     F  +IE +++             ++     +          Y +  
Sbjct: 211 IDTIKEAKEILEKEFNIKIEQLNMPSATCVNSIKKIHEEGGTHGEPGHGLTGSTPYHKFN 270

Query: 235 EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV 269
           +          + V     +            +H+
Sbjct: 271 DGDELPAMVYVSEVSHNLLDRAYCYGGGHYRRSHM 305


>gi|52081132|ref|YP_079923.1| putative alanine racemase [Bacillus licheniformis ATCC 14580]
 gi|52786510|ref|YP_092339.1| hypothetical protein BLi02775 [Bacillus licheniformis ATCC 14580]
 gi|319644904|ref|ZP_07999137.1| hypothetical protein HMPREF1012_00170 [Bacillus sp. BT1B_CT2]
 gi|52004343|gb|AAU24285.1| putative alanine racemase [Bacillus licheniformis ATCC 14580]
 gi|52349012|gb|AAU41646.1| putative protein [Bacillus licheniformis ATCC 14580]
 gi|317392713|gb|EFV73507.1| hypothetical protein HMPREF1012_00170 [Bacillus sp. BT1B_CT2]
          Length = 368

 Score = 40.9 bits (94), Expect = 0.33,   Method: Composition-based stats.
 Identities = 20/195 (10%), Positives = 54/195 (27%), Gaps = 10/195 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           + TP  LIDK  +L+N+           V L    K      +     +    G   + +
Sbjct: 6   LDTPALLIDKDVMLSNMKDMQNYANEQKVSLRPHTKTHKMPKLAKLQEEMGAVGIAVAKV 65

Query: 61  YEVM-LGHEKFGGETHAY---NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
            E   +          A      +  +       +   +   ++  Q+ + ++  +   K
Sbjct: 66  GEAEVMARNGLKDIFIANEIVGKSKLERIRKLSETIDISFGIDSAYQVREIEEVFEGASK 125

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
           K  + +   V                     +     +   + G+ F ++  +      +
Sbjct: 126 KAQVLVEIEVGE----QRSGIIEEDDFRTLLELIKTCQNVELKGI-FSHDGHSYKAKSVA 180

Query: 177 AMLKNIEKEFGHFIT 191
              +  ++     + 
Sbjct: 181 HCKELYKESVERTLH 195


>gi|119963284|ref|YP_946033.1| alanine racemase N-terminal domain-containing protein
          [Arthrobacter aurescens TC1]
 gi|119950143|gb|ABM09054.1| putative alanine racemase, N-terminal domain protein
          [Arthrobacter aurescens TC1]
          Length = 366

 Score = 40.9 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 2/77 (2%)

Query: 4  TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGTTSSSLYE 62
          TP  LID   L  N++      +  G++L   +K      +    L     G T +++ E
Sbjct: 10 TPAVLIDVDVLDRNIERMAGNMRGRGLQLRPHVKTHKTLEIARKQLAAGALGITVATIGE 69

Query: 63 VML-GHEKFGGETHAYN 78
            +   +       A+ 
Sbjct: 70 AEVFAADGVKDIFIAFP 86


>gi|149922547|ref|ZP_01910977.1| diaminopimelate decarboxylase [Plesiocystis pacifica SIR-1]
 gi|149816574|gb|EDM76069.1| diaminopimelate decarboxylase [Plesiocystis pacifica SIR-1]
          Length = 814

 Score = 40.9 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 22/217 (10%), Positives = 51/217 (23%), Gaps = 19/217 (8%)

Query: 9   IDKQKLLNNL--DTALYIRKNAGVKLLLALKCF--AAWGMFDTLNQYMDGTTSSSLYEVM 64
           +D       +  +          ++ + A K    +             G   +SL E+ 
Sbjct: 95  VDAALERERVLVEALQRSVGELPLRNMAAFKANHSSLLQFARVQADAGAGVEVASLPELY 154

Query: 65  LGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
                        +     +     +  +     F         +       ++ G+   
Sbjct: 155 TALCVGVRPGAVVFGNTNLNARELLIAMHLGVTAFCFDHPAKLARVLDCARTREGGVARL 214

Query: 124 PSVSYSKFILADPNRPFSRLGEKCK----------DKIESEIKNVNGLMFHNNCENKSFL 173
             +       A       R G              D++ +    + G+ FH     +S  
Sbjct: 215 RPLLRLAAPYASAALSMERFGLDVDKSPGLLEAVLDRLAAAGSALTGVSFHVGIGARSTA 274

Query: 174 CFSAML----KNIEKEFGHFITQIEWISLGGGIHFTD 206
            +  +                     + +GGG+ F D
Sbjct: 275 VYEQVFAQAEAVFAAAKARTGVAPWIVDIGGGLGFDD 311


>gi|146275923|ref|YP_001166083.1| alanine racemase domain-containing protein [Novosphingobium
           aromaticivorans DSM 12444]
 gi|145322614|gb|ABP64557.1| alanine racemase domain protein [Novosphingobium aromaticivorans
           DSM 12444]
          Length = 393

 Score = 40.9 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 29/84 (34%), Gaps = 2/84 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSL 60
           ++TP  ++D  ++  N+          GV L   LK   +  +   +    +G  T S+L
Sbjct: 22  LETPCLVLDADRMDRNIARLRDRIAGLGVTLRPHLKTAKSVEVARRVMATSEGPATVSTL 81

Query: 61  YEVMLGHEKFGGETHAYNVAYKDC 84
            E        G     Y V     
Sbjct: 82  KEAEF-FADAGVRDIIYAVGIAPW 104


>gi|86750314|ref|YP_486810.1| alanine racemase-like [Rhodopseudomonas palustris HaA2]
 gi|86573342|gb|ABD07899.1| Alanine racemase-like [Rhodopseudomonas palustris HaA2]
          Length = 360

 Score = 40.5 bits (93), Expect = 0.37,   Method: Composition-based stats.
 Identities = 22/205 (10%), Positives = 51/205 (24%), Gaps = 11/205 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           I TP  +ID  ++  N+     +   AGV     +K   +  +     +    G T   L
Sbjct: 13  IGTPALVIDMDRVERNIARVQGLCDAAGVANRPHIKTHKSPLLAQMQIKAGARGITCQKL 72

Query: 61  YEVM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCD---TIIFNTVSQLNKFKDKAQKLHK 116
            E   +          +YN+  ++        +      +  +    +      A +  +
Sbjct: 73  GEAEVMAEAGIDDILISYNLIGEEKMARLGALHERAQMIVAADNEVVIAGLPAAAARAGR 132

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
            +G+ +                  +        +  +    +             +    
Sbjct: 133 PLGVVVECDTG------RQRAGVETPAEAIALARTIAASDGLVFKGLMLYPTEDGWPQAQ 186

Query: 177 AMLKNIEKEFGHFITQIEWISLGGG 201
                            E +S GG 
Sbjct: 187 RFFDEALAGIRAHGLDAEIVSTGGS 211


>gi|148273757|ref|YP_001223318.1| putative alanine racemase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147831687|emb|CAN02656.1| putative alanine racemase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 566

 Score = 40.5 bits (93), Expect = 0.39,   Method: Composition-based stats.
 Identities = 36/332 (10%), Positives = 74/332 (22%), Gaps = 25/332 (7%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA--------AWGMFDTLNQYMDGTTSSS 59
           ++D   + +N+ T   +   A   +  A+K  A        A    +   + +     +S
Sbjct: 19  VVDLDAIRHNVRTLAALAAPARTMV--AVKADAYGHGALQVARAALEAGAESLAVLDVAS 76

Query: 60  LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
             E+            A+          AV +  D +  + + +L +     +    +  
Sbjct: 77  AVELR--RSGITARLLAWLHGVDTDFRVAVENGID-LGVSALWELERIAAAGRATGIRAR 133

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           + +      S+        P         D       +       +          +   
Sbjct: 134 VHLKADTGLSRNGATPELWPDLVRAAVAADAAGELTLHALWSHLADASPEDDDAALARFH 193

Query: 180 K----NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
           +      E         +   S G  +     D              +  S +       
Sbjct: 194 EAVRVAEELGARPVEKHLAASSAGIRLPAARFDMVRFGIAVYGISPFDDRSGRDLGLIPA 253

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP-DYLLYQESATIYPNTGPY-----T 289
             +         V         L    +     V            I             
Sbjct: 254 MTLEADVVSVKRVEAGHGVSYGLDHRTAGPSTLVLVPLGYADGIPRIAAPRASVLLNGRR 313

Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321
             V GR   A D       + PV++GD     
Sbjct: 314 FPVAGRI--AMDQLVLDVGDLPVEVGDTAVIL 343


>gi|307942316|ref|ZP_07657667.1| alanine racemase [Roseibium sp. TrichSKD4]
 gi|307774602|gb|EFO33812.1| alanine racemase [Roseibium sp. TrichSKD4]
          Length = 382

 Score = 40.5 bits (93), Expect = 0.40,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 2/84 (2%)

Query: 2  IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSL 60
          ++TP  ++D+ K++ N+        + GV L   LK   +  +   L     G  T S+L
Sbjct: 11 LQTPALILDEAKMMRNIRRLASQVDSLGVSLRPHLKTVKSIEVARRLLTDGTGPATVSTL 70

Query: 61 YEVMLGHEKFGGETHAYNVAYKDC 84
           E        G +   Y V     
Sbjct: 71 IEAE-VFAGAGIKDVIYAVGITPQ 93


>gi|17547428|ref|NP_520830.1| hypothetical protein RSc2709 [Ralstonia solanacearum GMI1000]
 gi|17429731|emb|CAD16416.1| putative ipr001608 alanine racemase, n-terminal protein [Ralstonia
           solanacearum GMI1000]
          Length = 376

 Score = 40.5 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 39/322 (12%), Positives = 78/322 (24%), Gaps = 31/322 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  LID  ++  N++         GV+    +K      +    L     G T S+L
Sbjct: 6   LNTPAALIDVARMTRNIERMQQRLDALGVRFRPHVKTTKCEPVVRAQLAAGAQGITVSTL 65

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCE-----IDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E        G     Y V                     I+ ++V+        A    
Sbjct: 66  KEAEQ-FFSAGICDIVYAVGMAPARLPQALALRRRGCDLKIVADSVTCAQAI--AAFGGE 122

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC- 174
                 +   V            P           +      + G++ H     +     
Sbjct: 123 HGEAFDVWIEVDVDGHR--SGIAPDDDRLITVGRVLAEGGMRLGGVLAHAGSSYEYHAHD 180

Query: 175 --------FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226
                     +      +         E +S+G           ++   +        + 
Sbjct: 181 ALVRIAELERSGCVRAAERLRAAGLPCETVSIG-STPTALSAEHLEGVTEVRAGVYVMFD 239

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286
           + ++     A+     ++ TTV+   E+              + D      S        
Sbjct: 240 LVMHNVGVCALSDIALSVLTTVIGHQEDKGWA----------IVDAGWMAMSRDRGTQKQ 289

Query: 287 PYTAMVCGRSCLAGDIFGEFHF 308
           P            G++ GE+  
Sbjct: 290 PRDFGYGLVCSEHGEVLGEYLM 311


>gi|330948109|gb|EGH48369.1| diaminopimelate decarboxylase [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 51

 Score = 40.5 bits (93), Expect = 0.42,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 14/49 (28%), Gaps = 1/49 (2%)

Query: 305 EFHFEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIAVKNVDGTIK 352
                K V IGD +       Y  N  +  F     P+         ++
Sbjct: 2   RRQPLKGVNIGDLLVLPLAGAYGYNISHADFLCHPRPSQHFVRNGERVR 50


>gi|119945753|ref|YP_943433.1| alanine racemase [Psychromonas ingrahamii 37]
 gi|119864357|gb|ABM03834.1| alanine racemase [Psychromonas ingrahamii 37]
          Length = 375

 Score = 40.5 bits (93), Expect = 0.43,   Method: Composition-based stats.
 Identities = 42/337 (12%), Positives = 91/337 (27%), Gaps = 30/337 (8%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLL-ALKCFAAWGMFDTLNQYMDGT-----TSSSLY 61
           +I    L +N+       K AG + L  A+K  A     + + +++         ++ L 
Sbjct: 12  IIHLDHLTHNMKVLQ---KKAGKRPLFPAIKANAYGHDAEIIAKHLISLGYTTLCTAHLS 68

Query: 62  EV-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           E   L  +         +    +     +  +   I+ ++  QL      A++  K+I +
Sbjct: 69  EAAELVEKGVNATFIILSPTLAENSDYLLDYDFQPIV-SSQVQLQALAQAARRRDKQITI 127

Query: 121 RINPSVSYS----------KFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN- 169
            +                  F+     +P   +G  C     ++  N++      N    
Sbjct: 128 HVKVDTGMGRMGVRPDQLLMFLDECKAQPEIIIGGVCSHFPRADENNLSFSKTQINTFTA 187

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWIS---LGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226
                 +  +          +  +E      +  GI        V      L +     S
Sbjct: 188 LKKETKAYNIPLYHIANSAALFALEEAHLDAIRPGISIYGLKPSVSMVVPELNDLKPIMS 247

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286
           +   +   + +V +T      +    +      I     +              I    G
Sbjct: 248 LVSRITLLKEVVQDTGISYGHLHYTDKPSLIATIPIGYGDGLSRSLSN-----RIEVLIG 302

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323
                  G  C+   +         V IGD +     
Sbjct: 303 NERCRQIGNICMDQCMIDVTQLRGKVSIGDEVVIIGT 339


>gi|306834227|ref|ZP_07467347.1| alanine racemase [Streptococcus bovis ATCC 700338]
 gi|304423800|gb|EFM26946.1| alanine racemase [Streptococcus bovis ATCC 700338]
          Length = 368

 Score = 40.5 bits (93), Expect = 0.43,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 31/99 (31%), Gaps = 7/99 (7%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFAAWG----MFDTLNQYMDGTTSSSLYE 62
           +ID   +  N+D           K   A+ K  A       +   ++  +DG   S++ E
Sbjct: 12  VIDLDVICQNIDAVK--ANIPQDKKAFAVVKANAYGHGATNVAHAIHHLVDGFCVSNIDE 69

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTV 101
            +   E    ET          E+        T+   + 
Sbjct: 70  ALELREAGIEETILILGVIMPDEVALARDYHVTLTVASQ 108


>gi|37525915|ref|NP_929259.1| hypothetical protein plu1996 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36785344|emb|CAE14289.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 392

 Score = 40.5 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 22/163 (13%), Positives = 50/163 (30%), Gaps = 5/163 (3%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALK-CFAAWGMFDTLNQYM-DGTTSSSLYEVM 64
           Y+ID  ++L N    L + ++ G+ L L  K       +   L +    G T+    E  
Sbjct: 31  YVIDVDQVLENARRLLAVAEHYGIALYLMTKQVGRNSWLARKLMELGYQGVTAVDFKEAR 90

Query: 65  LGHEKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
                    THA ++      + +  +  + + I   ++ +  +    A++      + +
Sbjct: 91  ALMSGKIPVTHAGHLVQIPRNMVSSVMQQHPEVITVYSLEKAEEISSLARREGNVQRIML 150

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-KNVNGLMFH 164
                +                      I +     + GL   
Sbjct: 151 KIYDDHDHLYPGQEAGFHLSELHTIVQHIMAMPGVKLTGLTHF 193


>gi|217979517|ref|YP_002363664.1| alanine racemase domain protein [Methylocella silvestris BL2]
 gi|217504893|gb|ACK52302.1| alanine racemase domain protein [Methylocella silvestris BL2]
          Length = 383

 Score = 40.5 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           + TP  ++D      N+     I    GV L    K   +  +     +    G   +++
Sbjct: 26  LNTPSLILDLDVFDANVARMQAICDANGVNLRPHAKSHKSSRIAQAQREAGAIGVCCATI 85

Query: 61  YEVML-GHEKFGGETHA 76
            E         GG    
Sbjct: 86  NEAEAMAVAGVGGLLIT 102


>gi|163790693|ref|ZP_02185120.1| predicted amino acid racemase [Carnobacterium sp. AT7]
 gi|159873994|gb|EDP68071.1| predicted amino acid racemase [Carnobacterium sp. AT7]
          Length = 385

 Score = 40.5 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 16/47 (34%), Gaps = 1/47 (2%)

Query: 7  YLIDKQKLLNNLDTALYIRKNAGVKLLLALK-CFAAWGMFDTLNQYM 52
          Y++D   +  N    +   K   ++L   LK       +   L +  
Sbjct: 31 YVLDLDIIRENAKKLIETAKKNDIELFFMLKQIGRNPAIAKMLVELG 77


>gi|330873739|gb|EGH07888.1| arginine decarboxylase [Pseudomonas syringae pv. glycinea str. race
           4]
          Length = 194

 Score = 40.5 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 14/113 (12%), Positives = 27/113 (23%), Gaps = 11/113 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53
           P  +     L + +                 +    L  +K      + +  +       
Sbjct: 70  PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK 106
           G  + S  E+M                YKD E   +      +  N    + K
Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEK 182


>gi|289675722|ref|ZP_06496612.1| arginine decarboxylase [Pseudomonas syringae pv. syringae FF5]
          Length = 231

 Score = 40.5 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 14/113 (12%), Positives = 27/113 (23%), Gaps = 11/113 (9%)

Query: 5   PYYLIDKQKLLNNLDTALYIRK--------NAGVKLLLALKCFAAWGMFD-TLNQYM--D 53
           P  +     L + +                 +    L  +K      + +  +       
Sbjct: 70  PLLVRFPDILQDRVRQLTGAFDSNIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSI 129

Query: 54  GTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNK 106
           G  + S  E+M                YKD E   +      +  N    + K
Sbjct: 130 GLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEK 182


>gi|153011211|ref|YP_001372425.1| alanine racemase domain-containing protein [Ochrobactrum anthropi
           ATCC 49188]
 gi|151563099|gb|ABS16596.1| alanine racemase domain protein [Ochrobactrum anthropi ATCC 49188]
          Length = 354

 Score = 40.5 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 49/201 (24%), Gaps = 5/201 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           + TP  LID  ++  N+  A       GVKL   +K            +    G T   L
Sbjct: 10  VDTPAILIDIDRVKANIAKAQAHADAVGVKLRPHIKTHKLPLFAKMQVEAGATGITCQKL 69

Query: 61  YEVM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E   +           YN+  ++        +    +  TV         A +   +  
Sbjct: 70  GEAEVMADAGLTNIFLPYNILGQEKLDRLHTLHQRITLSVTVDNRTSLAGLAARFTDEKH 129

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
                    +         P   L       I  +   +                    L
Sbjct: 130 PLKVLVECDTGMGRCGVQTPAEALELAR---IIDQSAGLRFGGLMTYPAAGKPDEAEQWL 186

Query: 180 KNIEKEFGHFITQIEWISLGG 200
            +  +         E IS GG
Sbjct: 187 YSARELLEANSLPCETISSGG 207


>gi|170745253|ref|YP_001766710.1| alanine racemase domain-containing protein [Methylobacterium
          radiotolerans JCM 2831]
 gi|170658854|gb|ACB27908.1| alanine racemase domain protein [Methylobacterium radiotolerans
          JCM 2831]
          Length = 393

 Score = 40.5 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 26/76 (34%), Gaps = 1/76 (1%)

Query: 2  IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSL 60
          ++TP  L+D+ +L  NL          GV L   LK   +  +         G    S+L
Sbjct: 22 LQTPCLLLDEARLRANLAGMRAHLDRLGVTLRPHLKTAKSIDVARLAMAGPAGPAMVSTL 81

Query: 61 YEVMLGHEKFGGETHA 76
           E     E    +   
Sbjct: 82 REAEYFAEGGVRDMIY 97


>gi|91778101|ref|YP_553309.1| metal-activated pyridoxal protein [Burkholderia xenovorans LB400]
 gi|91690761|gb|ABE33959.1| Metal-activated pyridoxal enzyme [Burkholderia xenovorans LB400]
          Length = 379

 Score = 40.5 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 44/172 (25%), Gaps = 11/172 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           I+TP  LID  ++  N+          GV     +K      +    +     G T S+L
Sbjct: 6   IETPAALIDIARMQKNIARMQGHMNTLGVAFRPHVKTTKCIDVVRAQIAAGARGITVSTL 65

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCE-----IDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E        G E   Y V+    +               ++ +  +        A    
Sbjct: 66  KEAE-AFFAAGVEDILYAVSMAPSKLPRALALRRQGCDLKLVVDNPNAAA--AIAAFSDQ 122

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
                 +   V              + L       +      V G+M H   
Sbjct: 123 HGQTFEVCIEVDTDGHRSGITPEQDTLLEVG--RILHENGVKVGGVMTHAGS 172


>gi|288563211|pdb|3LLX|A Chain A, Crystal Structure Of An Ala Racemase-Like Protein (Il1761)
           From Idiomarina Loihiensis At 1.50 A Resolution
          Length = 376

 Score = 40.1 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 61/212 (28%), Gaps = 21/212 (9%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-------DGT 55
            TPY LID+ KL +N++      ++ G  L              TL              
Sbjct: 13  DTPYLLIDEAKLKSNINYLKQRVESLGSHLR------PHLXTLRTLEAAGYLLDSKSAPA 66

Query: 56  TSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAV-----LSNCDTIIFNTVSQLNKFKDK 110
           T S+L E    + K G     Y V     ++  V           I+ + ++Q     D 
Sbjct: 67  TVSTLAEAE-AYAKAGYTDLLYAVGIAPAKLKRVAALRQQGINLHILLDNITQAQAVVDY 125

Query: 111 AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLM-FHNNCEN 169
           A +  +   + I       +  +   +     + +   +       +  G    +     
Sbjct: 126 AAEFGQDFSVFIEIDSDDHRGGIKPSDSKLLTIAKTLGEHFTGLXTHAGGSYACNTEQGL 185

Query: 170 KSFLCFSAM-LKNIEKEFGHFITQIEWISLGG 200
           K+F       ++                S+G 
Sbjct: 186 KNFAKQECDAVRIARNNLETAGIHCAITSVGS 217


>gi|163854345|ref|YP_001628643.1| putative amino acid aldolase or racemase [Bordetella petrii DSM
           12804]
 gi|163258073|emb|CAP40372.1| putative amino acid aldolase or racemase [Bordetella petrii]
          Length = 379

 Score = 40.1 bits (92), Expect = 0.49,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 19/78 (24%), Gaps = 2/78 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           + TP  ++D     +NL          GV L    K      +          G     +
Sbjct: 25  VDTPSLVLDLDAFESNLRQMQAWADRHGVALRPHAKAHKCPEIARRQLALGARGICCQKV 84

Query: 61  YEVM-LGHEKFGGETHAY 77
            E +            + 
Sbjct: 85  SEALPFVAAGIDDVHISN 102


>gi|149909881|ref|ZP_01898531.1| metal-activated pyridoxal enzyme [Moritella sp. PE36]
 gi|149807046|gb|EDM67004.1| metal-activated pyridoxal enzyme [Moritella sp. PE36]
          Length = 363

 Score = 40.1 bits (92), Expect = 0.50,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 4/70 (5%)

Query: 2  IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTS--- 57
          + TP  +IDK+KL++N++T           +    K      +    L+    G +    
Sbjct: 9  LDTPCLVIDKRKLMHNIETMQKFAAAKSKHVRPHAKTHKCVEICQLQLDAGSIGISITKP 68

Query: 58 SSLYEVMLGH 67
          S  YE+   H
Sbjct: 69 SEAYELAKAH 78


>gi|330829095|ref|YP_004392047.1| alanine racemase [Aeromonas veronii B565]
 gi|328804231|gb|AEB49430.1| Alanine racemase [Aeromonas veronii B565]
          Length = 408

 Score = 40.1 bits (92), Expect = 0.51,   Method: Composition-based stats.
 Identities = 48/333 (14%), Positives = 88/333 (26%), Gaps = 28/333 (8%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTL-----NQYMDGTTSSSLYEV 63
           +D     +N+ T      + G ++   +K  A     D L        +     +S  E 
Sbjct: 46  VDLGAFEHNIQTLKDRLGDKGPQICAIMKADAYGHGIDLLVPSVVKANIPCIGIASNEEA 105

Query: 64  MLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
            +  E  F G       A  D    A+    + +I  ++       D AQ+ H  I + I
Sbjct: 106 RVAREKGFTGRLMRVRAATPDEVEQALPYKMEELI-GSLVSAQGIADIAQRHHTTIPVHI 164

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEI-KNVNGLMFHNNCENKSFLCFSA---- 177
                         N    RL +  +D +     K +  +    +   +           
Sbjct: 165 -----ALNSAGMSRNGIDLRLADAKQDALAMLKLKGITPVGIMTHFPVEEKEDVKMGLAQ 219

Query: 178 -----MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK----EFSEKYSVQ 228
                       +       I   +    +   D  + +      L         +Y   
Sbjct: 220 FKLDSQWLLEAGKLDRSKITIHAANSFATLAVPDAYFDMVRPGGLLYGDSIPSHTEYKRV 279

Query: 229 IYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPY 288
           +  +   A V N      TV              +++     D      S   Y      
Sbjct: 280 MAFKTQVASV-NHYAAGNTVGYDRTFTLKRDSWLANLPLGYSDGYRRSLSNKAYVLIQGQ 338

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321
              V G++ +   I  +    K VK GD +   
Sbjct: 339 KVPVVGKTSMNT-IMVDVTDLKGVKPGDEVVLF 370


>gi|307727882|ref|YP_003911095.1| alanine racemase domain-containing protein [Burkholderia sp.
           CCGE1003]
 gi|307588407|gb|ADN61804.1| alanine racemase domain protein [Burkholderia sp. CCGE1003]
          Length = 376

 Score = 40.1 bits (92), Expect = 0.52,   Method: Composition-based stats.
 Identities = 21/137 (15%), Positives = 36/137 (26%), Gaps = 9/137 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  LID  ++  N++         GV     +K      +    L     G T S+L
Sbjct: 6   LNTPAALIDVARMNRNIERMQQRMNTLGVSFRPHVKTTKCEQVVRAQLAAGARGITVSTL 65

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCE-----IDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E        G     Y V     +               I+ ++V+        A    
Sbjct: 66  KEAEQFFAA-GIRDIVYAVGMAPTKLPQALALRRQGCDLKIVADSVACAEAI--VAFGRR 122

Query: 116 KKIGLRINPSVSYSKFI 132
                 +   +      
Sbjct: 123 YDEAFEVWIEIDVDGHR 139


>gi|124265522|ref|YP_001019526.1| low-specificity D-threonine aldolase [Methylibium petroleiphilum
           PM1]
 gi|124258297|gb|ABM93291.1| low-specificity D-threonine aldolase [Methylibium petroleiphilum
           PM1]
          Length = 372

 Score = 40.1 bits (92), Expect = 0.53,   Method: Composition-based stats.
 Identities = 16/166 (9%), Positives = 43/166 (25%), Gaps = 7/166 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60
           I +P  +++      NL       ++ GV+L    K      +    + +   G     +
Sbjct: 15  IDSPALVVEIDAFERNLAAMDAFARSHGVRLRPHAKTHKCSAIALHQVARGAVGVCVQKV 74

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSN----CDTIIFNTVSQLNKFKDKAQKLHK 116
            E +        +    N      ++  + +        I  ++V  + +    A     
Sbjct: 75  GEALALAAGGVRDVFVSNEVIAPTKLARLAALPSDVQLAIAVDSVVGIERL--AAAIQAS 132

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLM 162
              + +   +   +     P      L  +           +    
Sbjct: 133 GRQIDVYVEIDAGQGRCGVPAAEAGALARQVVAHDGLRFAGLQAYH 178


>gi|170745477|ref|YP_001766934.1| alanine racemase domain-containing protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170659078|gb|ACB28132.1| alanine racemase domain protein [Methylobacterium radiotolerans JCM
           2831]
          Length = 392

 Score = 40.1 bits (92), Expect = 0.53,   Method: Composition-based stats.
 Identities = 17/135 (12%), Positives = 36/135 (26%), Gaps = 9/135 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTS-- 57
           I+TP  ++D   L  N+       +  G++     K   +  +           G     
Sbjct: 32  IQTPCLILDLDALEGNIRKMGDYARAHGMRHRAHGKMHKSVDILKLQQSLGGACGVCCQK 91

Query: 58  SSLYEVMLGHEKFGG---ETHAYNVAYKDCEIDAVLSNCDTIIF-NTVSQLNKFKDKAQK 113
            S  EV                 +    D            I+  + V+ + +    AQ+
Sbjct: 92  VSEAEV-FARAGITDILVSNQVRDPGKIDRLARLPRHGARIIVCLDDVANVAELSAAAQR 150

Query: 114 LHKKIGLRINPSVSY 128
              ++   +      
Sbjct: 151 HGTQLDCFVEIDCGA 165


>gi|295699224|ref|YP_003607117.1| alanine racemase domain protein [Burkholderia sp. CCGE1002]
 gi|295438437|gb|ADG17606.1| alanine racemase domain protein [Burkholderia sp. CCGE1002]
          Length = 382

 Score = 40.1 bits (92), Expect = 0.55,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 45/172 (26%), Gaps = 11/172 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           I+TP  LID  ++  N+          GV     +K      +    +     G T S+L
Sbjct: 6   IETPAALIDVARMQKNIARMQGRMNELGVAFRPHVKTTKCIDVVRAQIAAGARGITVSTL 65

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCE-----IDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E        G +   Y V+    +               ++ +  +        A    
Sbjct: 66  KEAE-AFFAAGVDDILYAVSMVPSKLPRALALRRQGCDLKLVVDNPTAAA--ALAAFGDQ 122

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
                 +   V           +P  +        +      V G+M H   
Sbjct: 123 HGETFEVWIEVDTDGHR--SGIQPEQQTLLDVGRILHENGVKVGGVMTHAGS 172


>gi|254441228|ref|ZP_05054721.1| hypothetical protein OA307_643 [Octadecabacter antarcticus 307]
 gi|198251306|gb|EDY75621.1| hypothetical protein OA307_643 [Octadecabacter antarcticus 307]
          Length = 69

 Score = 40.1 bits (92), Expect = 0.55,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 20/61 (32%), Gaps = 4/61 (6%)

Query: 289 TAMVCGRSCLAGDIFGEFH---FEKPVKIGDRISFEDVAGYNINRKN-WFNGINMPTIAV 344
             +     C + D+  E         +K GD I   +   +  +  +  FNG     + V
Sbjct: 9   PCVFAAPPCDSADVLYEKQPMLLPVTLKAGDGIVNRNCDAHTSSYSSVGFNGFPPLDVLV 68

Query: 345 K 345
            
Sbjct: 69  I 69


>gi|300782672|ref|YP_003762963.1| alanine racemase [Amycolatopsis mediterranei U32]
 gi|299792186|gb|ADJ42561.1| alanine racemase [Amycolatopsis mediterranei U32]
          Length = 371

 Score = 40.1 bits (92), Expect = 0.55,   Method: Composition-based stats.
 Identities = 34/335 (10%), Positives = 95/335 (28%), Gaps = 27/335 (8%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMD-GTTSSSLYEV 63
           ID   + +NL       +  G +++  +K  A    A  +     +       + SL E 
Sbjct: 12  IDLDAIRHNLTLL--GARAPGSEVMAVVKADAYGHGALPVARAAVEAGATWLGTCSLGEA 69

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK-LHKKIGLRI 122
           +   E          +   D +    + N   +  +++ +L +    A+     ++ L+I
Sbjct: 70  LALREAGITARLFSWLDTPDVDFAPGVENDIDLAASSLGELRRISAAAKPGTPARVHLKI 129

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           +  +S +    A           + + ++ +   ++       +             +  
Sbjct: 130 DTGLSRNGCPPAAWAELVEAAAAEPRVEVVAIWSHLACADEPEHPSIDL--QAKRFAEAY 187

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE---AIVT 239
           +      +  +  ++    +               ++     Y +    +P +   A+  
Sbjct: 188 DTARAAGLDPMRHLANSAALLTR-----PDLHFDIVRPGIAMYGLNPVPQPEDLRPAMTF 242

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA-------MV 292
            +       ++  E++       +S E ++               +G            V
Sbjct: 243 RSAVALVKRIEAGESVSYGHTWTASRETNLALVPAGYADGVPRSLSGRMDVLLGGQRRPV 302

Query: 293 CGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYN 327
            GR C   D       +    +GD +       + 
Sbjct: 303 AGRVC--MDQLVVDCGDYEPSVGDEVVLFGAGAHG 335


>gi|297587277|ref|ZP_06945922.1| alanine racemase [Finegoldia magna ATCC 53516]
 gi|297575258|gb|EFH93977.1| alanine racemase [Finegoldia magna ATCC 53516]
          Length = 391

 Score = 40.1 bits (92), Expect = 0.56,   Method: Composition-based stats.
 Identities = 47/342 (13%), Positives = 95/342 (27%), Gaps = 33/342 (9%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYM-DGTTSSSLYEV 63
           +D  KL +N      I     VK+   +K  A    A  +   L     D    S++ E 
Sbjct: 10  VDLDKLKHNYKEIKNISNL--VKMCAVVKANAYGQGAAFITKELEYLGIDYFAVSNINEA 67

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +   +    +         +  I+  + N   +         +  + A+ L+K   + I 
Sbjct: 68  LELRKNGIFKPIMILGYISNENIEVAIKNNIELTVYDYETAVEINNVAKSLNKICKVHIK 127

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
                ++            L E        ++ NV     +++  +     +S   +   
Sbjct: 128 IDTGMTRLGFQVRLDKDKCLEEI---FKIYKMDNVVLQGIYSHFSDADSEDYSYTKEQYN 184

Query: 184 KEFGHF------ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI 237
              G           +    +          Y   D  +        ++     E     
Sbjct: 185 TYIGFMIDVENRGITVPIKHIANDAGAIIHGY-FLDMIRCGIGLYGYHASDYVRENSRLN 243

Query: 238 VTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL-------LYQESATIYPNTG---- 286
           +   ++L TTV  I    K   I          + +                 N      
Sbjct: 244 LEEISSLYTTVSMIKTVPKGTDIGYGRTFTTNSETVVATATIGYADGYPLELSNKAYVII 303

Query: 287 -PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE---DVA 324
               A + G+ C+   I  +  + + VK+GD+I      D+ 
Sbjct: 304 NGKKAKILGKVCMDQ-IMIDVTYIRDVKVGDKILLFGKDDMG 344


>gi|156362167|ref|XP_001625652.1| predicted protein [Nematostella vectensis]
 gi|156212495|gb|EDO33552.1| predicted protein [Nematostella vectensis]
          Length = 112

 Score = 40.1 bits (92), Expect = 0.56,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 21/62 (33%), Gaps = 1/62 (1%)

Query: 4  TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYE 62
          TP  L+D  +   N+   +   +N+GV+     K      +      +   G     L E
Sbjct: 14 TPVLLVDLCRFERNIRKLMKTLENSGVRARPHAKAHKCPAIAHIQISHGANGVCCQKLSE 73

Query: 63 VM 64
            
Sbjct: 74 AE 75


>gi|170744100|ref|YP_001772755.1| alanine racemase domain-containing protein [Methylobacterium sp.
          4-46]
 gi|168198374|gb|ACA20321.1| alanine racemase domain protein [Methylobacterium sp. 4-46]
          Length = 359

 Score = 40.1 bits (92), Expect = 0.56,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 28/83 (33%), Gaps = 2/83 (2%)

Query: 3  KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLY 61
           +P  +ID  ++  N+         AG+     +K   +  +     +    G T  +L 
Sbjct: 13 GSPAVMIDLDRVERNIARLQAACDAAGLANRPHIKTHKSPVLARMQREAGARGLTCQTLG 72

Query: 62 EVM-LGHEKFGGETHAYNVAYKD 83
          E   +          +YN+   +
Sbjct: 73 EAEVMAEAGLDDILISYNLVGPE 95


>gi|103488650|ref|YP_618211.1| threonine aldolase family protein [Sphingopyxis alaskensis
          RB2256]
 gi|98978727|gb|ABF54878.1| threonine aldolase family protein [Sphingopyxis alaskensis
          RB2256]
          Length = 381

 Score = 40.1 bits (92), Expect = 0.56,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 26/77 (33%), Gaps = 2/77 (2%)

Query: 2  IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
          + TP  ++D++ L  N+     + K AGV L    K   +  +          G   + +
Sbjct: 21 LNTPVLILDREALDRNIARMAALTKAAGVALRPHAKTHKSVDIARRQLDAGAVGVCCAKI 80

Query: 61 YEVM-LGHEKFGGETHA 76
           E   L      G    
Sbjct: 81 GEAEILADGGITGILIT 97


>gi|320536161|ref|ZP_08036211.1| alanine racemase [Treponema phagedenis F0421]
 gi|320146997|gb|EFW38563.1| alanine racemase [Treponema phagedenis F0421]
          Length = 379

 Score = 40.1 bits (92), Expect = 0.57,   Method: Composition-based stats.
 Identities = 17/163 (10%), Positives = 48/163 (29%), Gaps = 13/163 (7%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCF-----AAWGMFDTLNQYMDGTTSSSLYE 62
           +I    L  N+       K  GVK+ L +K       A       +   +     +S+ E
Sbjct: 7   IIHLDNLQYNIAEIKKRLK-PGVKICLPVKADAYGHGAFRVAVAAIRAGVSSLAVASIQE 65

Query: 63  -VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            + L +        + ++   +     +  N   ++ ++        ++A ++     + 
Sbjct: 66  GIDLRNAGIVAPIISLSLPILEEIHSIIEYNIHPLVIDSEFIHA-LNEEAARMKTVQAVH 124

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFH 164
           +          +               + ++     + G+  H
Sbjct: 125 LKID-----TGMNRIGCKPEDAITLAAEIVQLPNLKLEGVCTH 162


>gi|125717409|ref|YP_001034542.1| alanine racemase [Streptococcus sanguinis SK36]
 gi|125497326|gb|ABN43992.1| Alanine racemase, putative [Streptococcus sanguinis SK36]
          Length = 369

 Score = 40.1 bits (92), Expect = 0.57,   Method: Composition-based stats.
 Identities = 18/180 (10%), Positives = 47/180 (26%), Gaps = 11/180 (6%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYE 62
           +ID   +  N+            K   A+ K  A    A  +   ++  +DG   S++ E
Sbjct: 13  VIDLAAIAFNIRQLSAHLPQKTEK--WAVVKANAYGHGAIEVSKHIDPLVDGFCVSNIDE 70

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
            +       G+            +        ++   +   L              GL  
Sbjct: 71  ALELRSAGIGKKILVLGVSDLAALPLARKGKVSLTVAS---LEWLDLALTAEEDLTGLNF 127

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           +  +      +   +   ++          +  + +    F    E   +   + + +  
Sbjct: 128 HIKIDSGMGRIGFRDSQEAQEAIHRLQAAGAVAEGI-FTHFATADEVDHYKFEAQLARFH 186


>gi|229591485|ref|YP_002873604.1| putative metal-activated pyridoxal enzyme [Pseudomonas fluorescens
           SBW25]
 gi|229363351|emb|CAY50481.1| putative metal-activated pyridoxal enzyme [Pseudomonas fluorescens
           SBW25]
          Length = 378

 Score = 40.1 bits (92), Expect = 0.57,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 48/171 (28%), Gaps = 9/171 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  LID  ++ +N+          GV+L   +K      +    L     G T S+L
Sbjct: 8   LDTPAALIDIPRMQHNIQRMQQRMNTLGVRLRPHIKTSKCLPVIQAQLAAGASGVTVSTL 67

Query: 61  YEVMLGHEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
            E      +   +     A         +      C+  ++ ++V+        A     
Sbjct: 68  KEAQHCFSQGILDVFYAVAVAPGKLPQALALRRQGCNLSLLTDSVAGAQAL--VAFAQQH 125

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
              L +   +                        +     ++ G+M H   
Sbjct: 126 DERLDVWIEIDCDGHR--SGLAAEDEALLDVARILSDGGMHLRGVMTHAGS 174


>gi|325688113|gb|EGD30132.1| alanine racemase [Streptococcus sanguinis SK72]
          Length = 369

 Score = 40.1 bits (92), Expect = 0.58,   Method: Composition-based stats.
 Identities = 19/180 (10%), Positives = 46/180 (25%), Gaps = 11/180 (6%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYE 62
           +ID   +  N+            K   A+ K  A    A  +   +   +DG   S++ E
Sbjct: 13  VIDLAAIAFNIRQLSAHLPQMTEK--WAVVKANAYGHGAIEVSRHIEPLVDGFCVSNIDE 70

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
            +       G+            +        ++   +   L              GL  
Sbjct: 71  ALELRSAGIGKKILVLGVSDLAALPLARKGKVSLTVAS---LEWLDLALTAEEDLTGLNF 127

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           +  +      +   +   +R          +  + +    F    E +     + + +  
Sbjct: 128 HIKIDSGMGRIGFRDSQEAREAIHRLQAAGAVAEGI-FTHFATADEAEHHKFEAQLTRFH 186


>gi|218897074|ref|YP_002445485.1| alanine racemase [Bacillus cereus G9842]
 gi|218544621|gb|ACK97015.1| alanine racemase [Bacillus cereus G9842]
          Length = 391

 Score = 40.1 bits (92), Expect = 0.61,   Method: Composition-based stats.
 Identities = 34/335 (10%), Positives = 88/335 (26%), Gaps = 32/335 (9%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60
           ID   + +N++       +  +K++ A+K       A  +     +              
Sbjct: 13  IDLNAVKHNVNEFKKHVNDEKIKMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVDEA 72

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+             Y       ++              +       + A +L KK+ +
Sbjct: 73  IELREAGITVPILILGYTPVAAVEDVIQYDVMMTVYRVEDLHG---INEIANRLQKKVQI 129

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176
           ++      S+  L +            ++    E   V G+   +    E         +
Sbjct: 130 QVKIDTGMSRIGLQEEEVKPF-----LEELNRMEYVEVVGIFTHYSTADEIDKSYTNMQT 184

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIYLE 232
           ++ +           QI +I         +     ++  +        +  K      + 
Sbjct: 185 SLFEKAVNTARELGIQIPYIHSSNSAGSMELSNTFQNMVRVGIGVYGMYPSKEVDHTIVS 244

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287
              A+   +   +      +  +       ++ E  +    +          +       
Sbjct: 245 LQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGYALI 304

Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
                 V GR C+   +  +     PV++GD + F
Sbjct: 305 NGIRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 338


>gi|295680721|ref|YP_003609295.1| alanine racemase domain protein [Burkholderia sp. CCGE1002]
 gi|295440616|gb|ADG19784.1| alanine racemase domain protein [Burkholderia sp. CCGE1002]
          Length = 376

 Score = 40.1 bits (92), Expect = 0.61,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 49/172 (28%), Gaps = 11/172 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  LID  ++ +N+D         G +    +K      + D  +     G T S+L
Sbjct: 6   LNTPAALIDVARMRHNIDNMQARLDKLGARFRPHVKTTKCKQVVDAQVAAGACGITVSTL 65

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAV-----LSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E        G     Y V     ++              I+ +++       D      
Sbjct: 66  KEAEQFFAS-GVRDIVYAVGMVPTKLPQALALRQRGCDLKIVVDSLQVARAVAD--FGRE 122

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
                 +   +           +P   L  +    + +    + G++ H   
Sbjct: 123 HDERFEVWVEIDVDGHR--SGIQPDDDLLVEVGRALVAGGMTLGGVLAHAGS 172


>gi|227820182|ref|YP_002824153.1| metal-activated pyridoxal enzyme [Sinorhizobium fredii NGR234]
 gi|227339181|gb|ACP23400.1| metal-activated pyridoxal enzyme [Sinorhizobium fredii NGR234]
          Length = 387

 Score = 40.1 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 48/199 (24%), Gaps = 19/199 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTSSS 59
           I+TP  ++D   L  N+       K   ++     K   +  +     +     G     
Sbjct: 27  IQTPCLILDLDALERNIRKMGDYAKAHNMRHRAHGKMHKSVDVLRLQQELGGAIGVCCQK 86

Query: 60  LYEVMLGHEKFGGETHAYNVAYKDCE-----IDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114
           + E  +       +    N      +       A       +  + ++ + +     QK 
Sbjct: 87  VSEAEVFVRGGIKDVLVSNQVRDPLKIDRLARLAKQDARIIVCVDDLANVAELSAATQKH 146

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174
              +   +                   R G      + +    VNG         +++  
Sbjct: 147 GATLECFVEIDCGA------------GRCGVTSISAVVALADAVNGAPGLTFAGIQAYQG 194

Query: 175 FSAMLKNIEKEFGHFITQI 193
               +   E         I
Sbjct: 195 AMQHIDKYEDRKAKLDIAI 213


>gi|327461776|gb|EGF08107.1| alanine racemase [Streptococcus sanguinis SK1]
          Length = 369

 Score = 39.7 bits (91), Expect = 0.64,   Method: Composition-based stats.
 Identities = 18/180 (10%), Positives = 46/180 (25%), Gaps = 11/180 (6%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYE 62
           +ID   +  N+            K   A+ K  A    A  +   +   +DG   S++ E
Sbjct: 13  VIDLAAIAFNIRQLSAHLPQTTEK--WAVVKANAYGHGAIEVSRHIEPLVDGFCVSNIDE 70

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
            +       G+            +        ++   +   L              GL  
Sbjct: 71  ALELRSAGIGKKILVLGVSDLAALPLARKGKVSLTVAS---LEWLDLALDAEEDLTGLNF 127

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           +  +      +   +   ++          +  + +    F    E +     + + +  
Sbjct: 128 HIKIDSGMGRIGFRDSQEAQEAIHRLQAAGAVAEGI-FTHFATADEAEHHKFEAQLARFH 186


>gi|254472752|ref|ZP_05086151.1| alanine racemase domain protein [Pseudovibrio sp. JE062]
 gi|211958216|gb|EEA93417.1| alanine racemase domain protein [Pseudovibrio sp. JE062]
          Length = 383

 Score = 39.7 bits (91), Expect = 0.65,   Method: Composition-based stats.
 Identities = 21/184 (11%), Positives = 51/184 (27%), Gaps = 15/184 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTS-- 57
           ++TP  ++D     +NL          GV+     K   +  +     +     G     
Sbjct: 25  VQTPALIVDLDAFDHNLFKMRDEIARYGVRHRAHCKMHKSAEIAKLQMEQGHACGVCCQK 84

Query: 58  SSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNC-----DTIIFNTVSQLNKFKDKAQ 112
            S  E  L       +    N      +ID +           +  + +  +    + A 
Sbjct: 85  VSEAEA-LARAGIT-DIMVSNEVCDPYKIDRLAQLPKLGARILVCTDNLPNIAALSEAAV 142

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF 172
           K   ++ + +      S           + + E   + I +   +  G+  +      ++
Sbjct: 143 KHGTELEVLVELDCGGS----RCGVADSAAVLELATEIINAPNLHFAGIQSYQGAAQHAY 198

Query: 173 LCFS 176
               
Sbjct: 199 EYAD 202


>gi|332363899|gb|EGJ41678.1| alanine racemase [Streptococcus sanguinis SK355]
          Length = 369

 Score = 39.7 bits (91), Expect = 0.66,   Method: Composition-based stats.
 Identities = 18/180 (10%), Positives = 46/180 (25%), Gaps = 11/180 (6%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYE 62
           +ID   +  N+            K   A+ K  A    A  +   +   +DG   S++ E
Sbjct: 13  VIDLAAIAFNIRQLSAHLPQTTEK--WAVVKANAYGHGAIEVSKHIEPLVDGFCVSNIDE 70

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
            +       G+            +        ++   +   L              GL  
Sbjct: 71  ALELRSAGIGKRILVLGVSDLAALPLARKGKVSLTVAS---LEWLDLALAAEKDLTGLNF 127

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           +  +      +   +   ++          +  + +    F    E +     + + +  
Sbjct: 128 HIKIDSGMGRIGFRDSQEAQEAIHRLQAAGAVAEGI-FTHFATADEAEHHKFEAQLARFH 186


>gi|83747285|ref|ZP_00944327.1| Alanine racemase [Ralstonia solanacearum UW551]
 gi|207744276|ref|YP_002260668.1| ipr001608 alanine racemase, n-terminal protein [Ralstonia
           solanacearum IPO1609]
 gi|83726109|gb|EAP73245.1| Alanine racemase [Ralstonia solanacearum UW551]
 gi|206595681|emb|CAQ62608.1| ipr001608 alanine racemase, n-terminal protein [Ralstonia
           solanacearum IPO1609]
          Length = 376

 Score = 39.7 bits (91), Expect = 0.66,   Method: Composition-based stats.
 Identities = 37/323 (11%), Positives = 75/323 (23%), Gaps = 31/323 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  LID  ++  N+          GV+    +K      +    L     G T S+L
Sbjct: 6   LNTPAALIDVARMTGNIARMQQRLDALGVRFRPHVKTTKCEPVVRAQLAAGAQGITVSTL 65

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCE-----IDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E        G     Y V                     I+ ++V+        A    
Sbjct: 66  KEAEQFFAA-GIRDIVYAVGMAPTRLPQALALRRRGCDLKIVADSVACAQAI--AAFGSA 122

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC- 174
                 +   V            P           +      + G++ H     +     
Sbjct: 123 HGEAFEVWIEVDVDGHRSGIV--PDDDRLIAVGRVLAEGGMRLGGVLAHAGSSYEYHAHD 180

Query: 175 --------FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226
                     +      +         E +S+G           +    +        + 
Sbjct: 181 ALVRIAELERSGCVRAAERLRAAGLPCETVSIG-STPTALSAEHLDGVTEVRAGVYVMFD 239

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286
           + ++     A+     ++ TTV+   E+              + D      S        
Sbjct: 240 LVMHNVGVCALSDIALSVLTTVIGHQEDKGWA----------IVDAGWMAMSRDRGTQKQ 289

Query: 287 PYTAMVCGRSCLAGDIFGEFHFE 309
           P            G++  ++   
Sbjct: 290 PRDFGYGLVCSEQGEVLADYLMM 312


>gi|187931379|ref|YP_001891363.1| putative arginine decarboxylase [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|187712288|gb|ACD30585.1| putative arginine decarboxylase [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 469

 Score = 39.7 bits (91), Expect = 0.66,   Method: Composition-based stats.
 Identities = 27/235 (11%), Positives = 54/235 (22%), Gaps = 25/235 (10%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMDG-- 54
           P  L  +  L N LD        A           L   +K      +   +  Y     
Sbjct: 52  PLVLYFEHILKNQLDKLYTSFGKAIDDFSYTGKYSLAYPIKVNPEQKIIKAIYDYHQHNQ 111

Query: 55  ----TTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK 110
                   +  E +                +KD     +      I +  +  +    + 
Sbjct: 112 VSLDYEVGTKSEFLAVLSTAAKTQKIICNGFKDLSFYKIAQLAAKIGYKIIIVIENISEI 171

Query: 111 AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI--------ESEIKNVNGLM 162
                              +    D      + G                   + +  L 
Sbjct: 172 NIIQDLLDNNVNIKFDFGIRTKPFDNCIHTQKFGLSLSQINKCINFLKTNQLQQKLLLLH 231

Query: 163 FHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDKDYPVKDF 214
            H   + KS     A ++ + + +         +E+I  GGG+     +Y    +
Sbjct: 232 SHIGSQLKSTDKVVANIQRLMRIYSELKSDFVNLEYIDFGGGLAVNYDEYDRPSY 286


>gi|325696971|gb|EGD38858.1| alanine racemase [Streptococcus sanguinis SK160]
          Length = 369

 Score = 39.7 bits (91), Expect = 0.67,   Method: Composition-based stats.
 Identities = 18/180 (10%), Positives = 46/180 (25%), Gaps = 11/180 (6%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYE 62
           +ID   +  N+            K   A+ K  A    A  +   +   +DG   S++ E
Sbjct: 13  VIDLAAIAFNIRQLSAHLPQTTEK--WAVVKANAYGHGAIEVSRHIEPLVDGFCVSNIDE 70

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
            +       G+            +        ++   +   L              GL  
Sbjct: 71  ALELRSAGIGKKILVLGVSDLAALPLARKGKVSLTVAS---LEWLDLALTAEKDLTGLNF 127

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           +  +      +   +   ++          +  + +    F    E +     + + +  
Sbjct: 128 HIKIDSGMGRIGFRDSQEAQEAIHRLQAAGAVAEGI-FTHFATADEAEHHKFEAQLARFH 186


>gi|116748009|ref|YP_844696.1| alanine racemase [Syntrophobacter fumaroxidans MPOB]
 gi|189027394|sp|A0LFQ9|ALR_SYNFM RecName: Full=Alanine racemase
 gi|116697073|gb|ABK16261.1| alanine racemase [Syntrophobacter fumaroxidans MPOB]
          Length = 375

 Score = 39.7 bits (91), Expect = 0.67,   Method: Composition-based stats.
 Identities = 20/164 (12%), Positives = 47/164 (28%), Gaps = 11/164 (6%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDGTTSSSL-YEV 63
           ID   L +N   A       G ++L  +K  A       +   L        + S  +E 
Sbjct: 8   IDLAALRHNYSRAKERLA-PGSRILGVVKSDAYGHGMIPVARELVACGASFLAVSKHWEA 66

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +              +  +  E+   + N    +   +    +  D A+ L+    + + 
Sbjct: 67  VDLRAAGIRLPILCLLGVEPSEMAEAIRNEIRPVIYRIDHARRLSDTARSLNATATVHVK 126

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
                 +  +   +     L     + +      + G++ H   
Sbjct: 127 LDTGMGRLGIPCRH-----LEAFLNELLTLPAIRLEGVLSHFAS 165


>gi|330837455|ref|YP_004412096.1| alanine racemase domain-containing protein [Spirochaeta coccoides
           DSM 17374]
 gi|329749358|gb|AEC02714.1| alanine racemase domain protein [Spirochaeta coccoides DSM 17374]
          Length = 387

 Score = 39.7 bits (91), Expect = 0.67,   Method: Composition-based stats.
 Identities = 23/275 (8%), Positives = 58/275 (21%), Gaps = 11/275 (4%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALK-CFAAWGMFDTLNQYM-DGTTSSSLYEVM 64
           Y+ID  +L  N +          V L   LK       +   L      G  +    E +
Sbjct: 31  YVIDMDRLALNAENLKKTADAESVSLYFMLKQVGHNPVIARLLTDMGYAGAVAVDYREAL 90

Query: 65  -LGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
               +    G         K      + +  + +   ++ +  + +     LH +  + +
Sbjct: 91  EYVDQGIPLGNVGHLVQTPKATLPKILSARPEIMTIYSLEKAQEIEHICSHLHMEQQVML 150

Query: 123 N-PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNN------CENKSFLCF 175
                              + L E      +    ++ G+                    
Sbjct: 151 RVMDNGDICLPGQTGGFSLASLPEVVSSLRKLPHVHIAGVTAFPCFLYDEKRGTIFPTHN 210

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
           S+ +             +  ++L             +      +                
Sbjct: 211 SSTVVKAAAWLRDRGIPVSQVNLPSATCSDTIPLIHQIGGTHGEPGHGLTGTTPLHAEKN 270

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP 270
                     + V      +           +H+ 
Sbjct: 271 CAEIPGIVYVSEVSHTEGGMSFCYGGGHYRRSHMR 305


>gi|295110109|emb|CBL24062.1| alanine racemase [Ruminococcus obeum A2-162]
          Length = 388

 Score = 39.7 bits (91), Expect = 0.67,   Method: Composition-based stats.
 Identities = 37/382 (9%), Positives = 88/382 (23%), Gaps = 54/382 (14%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKC----FAAWGMFDTLN--QYMDGTTSSSLY 61
           ++    + +N +         G K++  +K       A  +   +   +Y+ G  +++  
Sbjct: 10  VVSLDAIAHNFEEMKKNIAE-GTKIVAVIKADGYGHGAEAIARLIEDYEYIWGYATATPE 68

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E +   +    +         +     ++++   +            ++A +  +++ + 
Sbjct: 69  EALQLRDAGIDKPILILGIVFEEYYKELIAHEVRMTVCEYEMAAALSEEAVRQGRQVHIH 128

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFSA 177
           I         +            E  K         + G+   F    E      +    
Sbjct: 129 IGLD----TGMSRIGFADVPESVETIKKIAALPNVEIEGMFTHFARADETDRSPAITQLN 184

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE--PGE 235
                 +       +I                   +  +        Y            
Sbjct: 185 RYLAFTELLEKAGVEIPMKHCSNSAGIIRVPEANLNAVRAGITIYGIYPSNEVERDIVKL 244

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP----DYLLYQESATIYPNTGP---- 287
                  +  + V D+            + E  +                  N G     
Sbjct: 245 IPAMELKSHVSYVKDLPAGTPISYGGTFASEKDLRVATIPVGYADGYPRSLSNKGWVLIH 304

Query: 288 -YTAMVCGRSCLAGDIFGEFHFE-KPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345
              A + GR C   D F     +   VK GD                         + + 
Sbjct: 305 GQKAPIIGRVC--MDQFMVDVTDIPEVKHGD------------------------EVTLI 338

Query: 346 NVDGTIKAIREFSYNDYYNNLS 367
             DG  + I   ++ D     S
Sbjct: 339 GKDGE-EFISIETFGDLSGRFS 359


>gi|206562454|ref|YP_002233217.1| putative alanine racemase [Burkholderia cenocepacia J2315]
 gi|198038494|emb|CAR54452.1| putative alanine racemase [Burkholderia cenocepacia J2315]
          Length = 376

 Score = 39.7 bits (91), Expect = 0.68,   Method: Composition-based stats.
 Identities = 23/178 (12%), Positives = 45/178 (25%), Gaps = 9/178 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  LID  ++  N+          GV+    +K      + D  +     G T S+L
Sbjct: 6   LNTPAALIDVGRMQRNIARMQTHLDALGVRFRPHVKTTKCRHVVDAQIAAGAQGITVSTL 65

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDA-----VLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E        G     Y V     ++              I+ +++         A    
Sbjct: 66  KEAEQFFAH-GIRDIVYAVGMVPAKLGQALALRRQGCDLKIVADSLPAAQAI--AAFGRE 122

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFL 173
                 +   V         P      +           +         ++ E+ +  
Sbjct: 123 HGERFDVWIEVDVDGHRSGIPPEADLLIDVGRALTGGGTLLGGVLAHAGSSYEHDTPD 180


>gi|308178610|ref|YP_003918016.1| alanine racemase-like protein [Arthrobacter arilaitensis Re117]
 gi|307746073|emb|CBT77045.1| alanine racemase-like protein [Arthrobacter arilaitensis Re117]
          Length = 366

 Score = 39.7 bits (91), Expect = 0.70,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 63/211 (29%), Gaps = 18/211 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGTTSSSL 60
           I TP  L+D  KL  N+D   +   + G+KL    K      +    +N    G T +++
Sbjct: 8   ISTPQILVDVAKLEKNIDRVAHRVASQGLKLRPHAKTHKMQEIAERQMNAGAAGLTVATV 67

Query: 61  YEVM-LGHEKFGGETHAYN----VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E +            AY      A     ++ +     +I  ++V  + +      +  
Sbjct: 68  GEALSFALHGVAKIFIAYPLWVDQAQATRILELMRRAKLSIGTDSVEAVEQMAKMLGEKV 127

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNG-LMFHNNCENKS--- 171
            K+ L I     +        +    +   +  +   +    V+G   F  +        
Sbjct: 128 SKVKLIIEIDSGH------HRSGVSPQGAVEIAEAARAVGMRVHGVFTFPGHSYAPEGID 181

Query: 172 --FLCFSAMLKNIEKEFGHFITQIEWISLGG 200
                    L             I+ IS G 
Sbjct: 182 AALNDEHKALAEAACLLRDAGHTIKRISGGS 212


>gi|160941188|ref|ZP_02088525.1| hypothetical protein CLOBOL_06081 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435749|gb|EDP13516.1| hypothetical protein CLOBOL_06081 [Clostridium bolteae ATCC
           BAA-613]
          Length = 392

 Score = 39.7 bits (91), Expect = 0.70,   Method: Composition-based stats.
 Identities = 26/254 (10%), Positives = 56/254 (22%), Gaps = 20/254 (7%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWG-MFDTLNQY-MDGTT---SSSLYEV 63
           I    + +N            VK++ A+K  A    +     +    G       S+ E 
Sbjct: 14  ISLDNVRDNFFAFKK-MVGPDVKVMPAVKANAYGHGIVPCGKELEACGADYLGMGSISEA 72

Query: 64  MLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
           +   E         +     +   +  +         +  +     D A          +
Sbjct: 73  IKLRENGVKMPLLVFASNTIEEVAELYIQYHLIPTILSEREAKAISDAASSPVP-----V 127

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
              +   +  L      F     K        ++ V   M   N  + S        +  
Sbjct: 128 FVKIDTGRGRLGVNAEEFPDFYRKITALPNLYVEGVYSHMAAVNWPDVSAEYGLWQYERF 187

Query: 183 E---KEFGHFITQIEWISL-----GGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
               +  G    +I +  L     G  +                    ++      L+  
Sbjct: 188 SAAIEVLGEEGKKIPFCQLANTPGGIALPEIRMTGVCPGRAIWGYSPLDRREGHPQLKHP 247

Query: 235 EAIVTNTTTLNTTV 248
                +       V
Sbjct: 248 ITAWKSRLIHINQV 261


>gi|75763091|ref|ZP_00742872.1| Alanine racemase [Bacillus thuringiensis serovar israelensis ATCC
           35646]
 gi|228900692|ref|ZP_04064911.1| Alanine racemase [Bacillus thuringiensis IBL 4222]
 gi|74489425|gb|EAO52860.1| Alanine racemase [Bacillus thuringiensis serovar israelensis ATCC
           35646]
 gi|228858950|gb|EEN03391.1| Alanine racemase [Bacillus thuringiensis IBL 4222]
          Length = 408

 Score = 39.7 bits (91), Expect = 0.70,   Method: Composition-based stats.
 Identities = 34/335 (10%), Positives = 88/335 (26%), Gaps = 32/335 (9%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60
           ID   + +N++       +  +K++ A+K       A  +     +              
Sbjct: 30  IDLNAVKHNVNEFKKHVNDEKIKMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVDEA 89

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+             Y       ++              +       + A +L KK+ +
Sbjct: 90  IELREAGITVPILILGYTPVAAVEDVIQYDVMMTVYRVEDLHG---INEIANRLQKKVQI 146

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176
           ++      S+  L +            ++    E   V G+   +    E         +
Sbjct: 147 QVKIDTGMSRIGLQEEEVKPF-----LEELNRMEYVEVVGIFTHYSTADEIDKSYTNMQT 201

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIYLE 232
           ++ +           QI +I         +     ++  +        +  K      + 
Sbjct: 202 SLFEKAVNTARELGIQIPYIHSSNSAGSMELSNTFQNMVRVGIGVYGMYPSKEVDHTIVS 261

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287
              A+   +   +      +  +       ++ E  +    +          +       
Sbjct: 262 LQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGYALI 321

Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
                 V GR C+   +  +     PV++GD + F
Sbjct: 322 NGIRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 355


>gi|326533006|dbj|BAJ89348.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 548

 Score = 39.7 bits (91), Expect = 0.71,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 60/216 (27%), Gaps = 22/216 (10%)

Query: 44  MFDTLNQYMDGTTSSSLYEVMLGH----EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN 99
           + +    +  G  + S  E++L       +   +       YKD E  ++     T+  N
Sbjct: 3   IVEFGAPFGFGLEAGSKPELLLTMSCLVARGSPDALLICNGYKDLEYVSLALIARTMGLN 62

Query: 100 TVSQLNK-----FKDKAQKLHKKIGLRINPSVSYSKFILAD--PNRPFSRLGEKCKDKIE 152
           TV  L +        +A +      +    +   +K        +    + G      + 
Sbjct: 63  TVIVLEQEEELDIVVEASRRLNIRPVVGMRAKLRTKHAGHFGATSGEKGKFGLNAAQILS 122

Query: 153 S--------EIKNVNGLMFHNNCENKS---FLCFSAMLKNIEKEFGHFITQIEWISLGGG 201
                     +  +  L FH   +  +             I  E       +  I +GGG
Sbjct: 123 VVAKLKALGMLDCLQLLHFHIGSQIPTTALLADGVGEAAQIYCELARLGAAMRVIDVGGG 182

Query: 202 IHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI 237
           +          +    +    E+Y+  +    G   
Sbjct: 183 LGIDYDGTHSAETDMSVAYSLEEYAAAVVAAVGRVC 218


>gi|302379690|ref|ZP_07268175.1| alanine racemase [Finegoldia magna ACS-171-V-Col3]
 gi|302312597|gb|EFK94593.1| alanine racemase [Finegoldia magna ACS-171-V-Col3]
          Length = 391

 Score = 39.7 bits (91), Expect = 0.72,   Method: Composition-based stats.
 Identities = 46/342 (13%), Positives = 95/342 (27%), Gaps = 33/342 (9%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYM-DGTTSSSLYEV 63
           +D  KL +N      I     VK+   +K  A    A  +   L     D    S++ E 
Sbjct: 10  VDLDKLKHNYKEIKNISNL--VKMCAVVKANAYGQGAAFITKELEYLGIDYFAVSNINEA 67

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +   +    +         +  I+  + N   +         +  + A+ L+K   + I 
Sbjct: 68  LELRKNGIFKPIMILGYISNENIEVAIKNNIELTVYDYDTAVEINNVAKSLNKICKVHIK 127

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
                ++            L E        ++ NV     +++  +     +S   +   
Sbjct: 128 IDTGMTRLGFQVRLDHDKCLEEI---FKIYKMDNVVLQGIYSHFSDADSEDYSYTKEQYN 184

Query: 184 KEFGHF------ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI 237
              G           +    +          Y   D  +        ++     E     
Sbjct: 185 TYIGFMIDVENRGITVPIKHIANDAGAIIHGY-FLDMIRCGIGLYGYHASDYVTENSRLN 243

Query: 238 VTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL-------LYQESATIYPNTG---- 286
           +   ++L TTV  I    K   I          + +                 N      
Sbjct: 244 LEEISSLYTTVSMIKTVPKGTDIGYGRTFTTNSETIVATATIGYADGYPLELSNKAYVII 303

Query: 287 -PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE---DVA 324
               A + G+ C+   I  +  + + VK+GD++      D+ 
Sbjct: 304 NGKKAKILGKVCMDQ-IMIDVTYIRDVKVGDKVLLFGKDDMG 344


>gi|67541953|ref|XP_664744.1| hypothetical protein AN7140.2 [Aspergillus nidulans FGSC A4]
 gi|40742202|gb|EAA61392.1| hypothetical protein AN7140.2 [Aspergillus nidulans FGSC A4]
 gi|259483529|tpe|CBF78993.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
          Length = 414

 Score = 39.7 bits (91), Expect = 0.73,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 46/173 (26%), Gaps = 11/173 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG----TTS 57
           + TP  ++ K  +  N+   L   +  G+     +K   +  +   +    +G      +
Sbjct: 15  LPTPALVLSKPTIERNIKQLLQDVERLGIAFRPHVKTLKSLEVTRMM--LGNGQHRRIVA 72

Query: 58  SSLYEVM----LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
           S+L E+     L  E    E       Y       +  +    I   +          + 
Sbjct: 73  STLPEIEGAIPLAKEGVLDECLYSMPIYPTVLPRLLKFSKSLKILLMIDNEQHIDVLEKF 132

Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNN 166
                   +   +       A      S L    K   ES    + G   H  
Sbjct: 133 SGSTAPWPVFIKIDV-GTRRAGILNSSSALPNLVKRVEESSAVELYGFYCHAG 184


>gi|327458867|gb|EGF05215.1| alanine racemase [Streptococcus sanguinis SK1057]
          Length = 369

 Score = 39.7 bits (91), Expect = 0.74,   Method: Composition-based stats.
 Identities = 18/180 (10%), Positives = 46/180 (25%), Gaps = 11/180 (6%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYE 62
           +ID   +  N+            K   A+ K  A    A  +   +   +DG   S++ E
Sbjct: 13  VIDLAAIAFNIRQLSAHLPQTTEK--WAVVKANAYGHGAIEVSKHIEPLVDGFCVSNIDE 70

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
            +       G+            +        ++   +   L              GL  
Sbjct: 71  ALELRSAGIGKKILVLGVSDLAALPLARKGKVSLTVAS---LEWLDLALAAEKDLTGLNF 127

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           +  +      +   +   ++          +  + +    F    E +     + + +  
Sbjct: 128 HIKIDSGMGRIGFRDSQEAQEAIHRLQAAGAVAEGI-FTHFATADEAEHHKFEAQLARFH 186


>gi|255953449|ref|XP_002567477.1| Pc21g04310 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211589188|emb|CAP95328.1| Pc21g04310 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 410

 Score = 39.7 bits (91), Expect = 0.75,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 49/176 (27%), Gaps = 13/176 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTT----S 57
           + TP  ++ K  L  N    L   K  G++    +K      +   +    DG      +
Sbjct: 19  LPTPALILSKPVLERNTQILLEDVKQLGIEFRPHIKTLKCTEVTRMM--LGDGLHRRIVA 76

Query: 58  SSLYEVM----LGHEKFGGETHA---YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK 110
           S+L E+     L  E    E       + +          S    ++ ++  Q++  +  
Sbjct: 77  STLAEIRGSLDLVKEGKIDECLYGLPISASALPFLETLNKSLKIILMVDSEQQIDLLEAY 136

Query: 111 AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNN 166
           A K    +               A        L    +    S    V G   H  
Sbjct: 137 AAKSSSPVVPWPVFIKIDVGSQRAGMTTHSPCLPRLIQRIESSSAATVYGFYCHAG 192


>gi|196005009|ref|XP_002112371.1| hypothetical protein TRIADDRAFT_56315 [Trichoplax adhaerens]
 gi|190584412|gb|EDV24481.1| hypothetical protein TRIADDRAFT_56315 [Trichoplax adhaerens]
          Length = 370

 Score = 39.7 bits (91), Expect = 0.75,   Method: Composition-based stats.
 Identities = 24/211 (11%), Positives = 51/211 (24%), Gaps = 18/211 (8%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYE 62
           TP  ++D QKL  NL       K   + +    K      +     ++   G     L E
Sbjct: 17  TPALVVDLQKLDYNLKRLPESLKGININIRPHAKAHKCPSLAHFQIKHGSVGMCCQKLCE 76

Query: 63  VMLGHEKFGGETHAYNV----AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
                     +    N     +          +   T+  +     ++    A+ L+ ++
Sbjct: 77  AESMVTGGIKDILLSNELVGKSKLTRLALLARNAHITVCIDNEDVASQLSHIAKDLNVEL 136

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS------- 171
              +   V            P        +        +  G+  +              
Sbjct: 137 DALVEIDVGQE----RCGVPPGEAAVNLARHLTSLPNLHYKGIQAYQGWNQHIRKYNDRK 192

Query: 172 --FLCFSAMLKNIEKEFGHFITQIEWISLGG 200
                    +K   +         E ++ GG
Sbjct: 193 AAVDMVVTKVKVTLEALRKHNLPCEIVTGGG 223


>gi|126444781|ref|YP_001061081.1| Orn/DAP/Arg decarboxylase family protein [Burkholderia pseudomallei
           668]
 gi|126224272|gb|ABN87777.1| Orn/DAP/Arg decarboxylase family 2 [Burkholderia pseudomallei 668]
          Length = 38

 Score = 39.7 bits (91), Expect = 0.78,   Method: Composition-based stats.
 Identities = 4/38 (10%), Positives = 8/38 (21%), Gaps = 1/38 (2%)

Query: 309 EKPVKIGDRISFEDVAGYNINRKNW-FNGINMPTIAVK 345
               + GD +       Y +      F         + 
Sbjct: 1   MATARPGDLLVVFQSGAYGLTASPNGFLSQPAAREVIV 38


>gi|299533035|ref|ZP_07046422.1| alanine racemase-like protein [Comamonas testosteroni S44]
 gi|298719259|gb|EFI60229.1| alanine racemase-like protein [Comamonas testosteroni S44]
          Length = 394

 Score = 39.7 bits (91), Expect = 0.80,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 22/82 (26%), Gaps = 10/82 (12%)

Query: 2  IKTPYYLIDKQKLLNNLDTALYIRKNAGV------KLLLALKCFAAWGMFDTLNQYMDGT 55
          I TP  +ID   +  N++      +  GV      KL    K      + +         
Sbjct: 19 IDTPALVIDLDAMDRNIERMARFAQQHGVLWRPHAKLH---KSAHIAHLLEHAGACGHCV 75

Query: 56 TSSSLYEVMLGHEKFGGETHAY 77
             S  E  L          + 
Sbjct: 76 QKVSEAEA-LAQGGITNIFISN 96


>gi|264680409|ref|YP_003280319.1| alanine racemase [Comamonas testosteroni CNB-2]
 gi|262210925|gb|ACY35023.1| alanine racemase-like protein [Comamonas testosteroni CNB-2]
          Length = 394

 Score = 39.7 bits (91), Expect = 0.80,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 22/82 (26%), Gaps = 10/82 (12%)

Query: 2  IKTPYYLIDKQKLLNNLDTALYIRKNAGV------KLLLALKCFAAWGMFDTLNQYMDGT 55
          I TP  +ID   +  N++      +  GV      KL    K      + +         
Sbjct: 19 IDTPALVIDLDAMDRNIERMARFAQQHGVLWRPHAKLH---KSAHIAHLLEHAGACGHCV 75

Query: 56 TSSSLYEVMLGHEKFGGETHAY 77
             S  E  L          + 
Sbjct: 76 QKVSEAEA-LAQGGITNIFISN 96


>gi|221064978|ref|ZP_03541083.1| alanine racemase domain protein [Comamonas testosteroni KF-1]
 gi|220710001|gb|EED65369.1| alanine racemase domain protein [Comamonas testosteroni KF-1]
          Length = 394

 Score = 39.7 bits (91), Expect = 0.80,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 22/82 (26%), Gaps = 10/82 (12%)

Query: 2  IKTPYYLIDKQKLLNNLDTALYIRKNAGV------KLLLALKCFAAWGMFDTLNQYMDGT 55
          I TP  +ID   +  N++      +  GV      KL    K      + +         
Sbjct: 19 IDTPALVIDLDAMDRNIERMARFAQQHGVLWRPHAKLH---KSAHIAHLLEHAGACGHCV 75

Query: 56 TSSSLYEVMLGHEKFGGETHAY 77
             S  E  L          + 
Sbjct: 76 QKVSEAEA-LAQGGITNIFISN 96


>gi|329928943|ref|ZP_08282753.1| alanine racemase [Paenibacillus sp. HGF5]
 gi|328937195|gb|EGG33622.1| alanine racemase [Paenibacillus sp. HGF5]
          Length = 395

 Score = 39.7 bits (91), Expect = 0.80,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 40/159 (25%), Gaps = 12/159 (7%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLA-LKCFA----AWGMFDTLNQYM-DGTTSSSLYE 62
           I+   L  N +             LLA +K  A    A  +   L Q      + + L E
Sbjct: 12  INLDHLRANYNAFREAL--PDHMKLLACVKANAYGHGAVEVARELQQLGAAYLSVAFLDE 69

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
            +   +                 ++       TI   +   L   K    K  K + + I
Sbjct: 70  ALELRQGGISVPILVLGYTPPEAVEIAYEYDVTITLFSSEVLQAIKALPVKPEKPLKVHI 129

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL 161
                    +      P        ++        V G+
Sbjct: 130 KIDSG----MGRLGLLPGEDAISFIEEAFSLPQVVVEGM 164


>gi|309777378|ref|ZP_07672339.1| alanine racemase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308914919|gb|EFP60698.1| alanine racemase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 398

 Score = 39.7 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 20/164 (12%), Positives = 48/164 (29%)

Query: 44  MFDTLNQYMDGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQ 103
           +  T+    D    +S YE     E    +         D  ++  +    T    +   
Sbjct: 61  VARTIEDESDWFAVASFYEAKELREHGITKPILVFGFLDDSHVEEAVQRDITCSALSYEY 120

Query: 104 LNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMF 163
                   ++   ++ + I     + +  +           E+ +   E+E  ++ G+  
Sbjct: 121 AMHLAHLCEQKKLRLSMHIKLDTGFHRLGIDCDENRLQEAYEEVRQLYETEALHITGIYT 180

Query: 164 HNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK 207
           H +          A LK   + F   +  ++   +  GI     
Sbjct: 181 HFSTAGSKVAQDEAFLKRQYQLFCEILQCLKEDQIDPGIRHCCN 224


>gi|295115115|emb|CBL35962.1| Alanine racemase [butyrate-producing bacterium SM4/1]
          Length = 155

 Score = 39.7 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 14/120 (11%), Positives = 33/120 (27%), Gaps = 13/120 (10%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF--------AAWGMFDTLNQYMDGTTSSSL 60
           ID   + +N           G+K++ A+K          +   + +    Y+      ++
Sbjct: 14  IDLDTIRSNFAALRS-MAGPGIKIMPAVKANAYGHGIVESCRALEEAEADYLG---VGNI 69

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E +L  E         +     +   D  +         +V         ++  H    
Sbjct: 70  DEAILLREIGIQTPILIFAGNLVEEVADLYIRYSLIPTIFSVKAAQAISRLSKAEHPVFL 129


>gi|170016499|ref|YP_001727418.1| alanine racemase [Leuconostoc citreum KM20]
 gi|169803356|gb|ACA81974.1| Alanine racemase [Leuconostoc citreum KM20]
          Length = 370

 Score = 39.7 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 24/204 (11%), Positives = 56/204 (27%), Gaps = 11/204 (5%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAA-WGMFDTLNQYMD----GTTSSSLYEV 63
           I ++ L NN+     +      K+ LA+K  A   G+  T    +     G   + + E 
Sbjct: 13  ISQKALKNNVAVVKRVSGAE--KIFLAVKSNAYGLGLIPTAKAAVAGGVYGLAVAIIDEA 70

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +    +                 + +          +   L+  ++ AQ L  +  L ++
Sbjct: 71  LALRHERITAPILILGISPAEYAELMAVQHIMATVVS---LDWLQEAAQYLTGEQRLHVS 127

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
             V      +   +R                   V         ++     F+  L+   
Sbjct: 128 LGVDTGMGRIGFRDRQSLSEAIDYVQAHRDIFDYVGLATHFAESDSADTDYFNMQLQRW- 186

Query: 184 KEFGHFITQIEWISLGGGIHFTDK 207
            +    + + E+  +         
Sbjct: 187 HKLTDGLPEPEYYHVANSGAAMYH 210


>gi|325182550|emb|CCA17005.1| unnamed protein product [Albugo laibachii Nc14]
          Length = 412

 Score = 39.4 bits (90), Expect = 0.82,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 49/170 (28%), Gaps = 10/170 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLL--ALKCFAAWGM--FDTLNQYMDGTTS 57
           I+TP  L+D + L  N+       +  G ++ +    K      +           G   
Sbjct: 38  IETPCLLVDLRALEKNVRFLPESLQRIGAQVHIRPHAKAHKCAAIGRLQIQESQAVGLCC 97

Query: 58  SSLYEVMLGHEKFGGET-----HAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112
             + E     +    +            Y+     A      T++F+ +  + + +  A 
Sbjct: 98  QKVCEAEAMFKGGIKDLLLSNEIIGIAQYERVAALAAQGAKMTLVFDNMLAIQQAQQVAM 157

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLM 162
           KL   +   +  +V   +  +    +    L    KD        +    
Sbjct: 158 KLQVDLHALVEVNVGQDRCGVDTFEQV-LDLALCIKDASNLTFDGLQCYH 206


>gi|324993504|gb|EGC25424.1| alanine racemase [Streptococcus sanguinis SK405]
          Length = 369

 Score = 39.4 bits (90), Expect = 0.82,   Method: Composition-based stats.
 Identities = 18/180 (10%), Positives = 47/180 (26%), Gaps = 11/180 (6%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYE 62
           +ID   +  N+            K   A+ K  A    A  +   +   +DG   S++ E
Sbjct: 13  VIDLAAIAFNIRQLSAHLPQTTEK--WAVVKANAYGHGAIEVSRHIEPLVDGFCVSNIDE 70

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
            +       G+            +        ++   +   L+             GL  
Sbjct: 71  ALELRSAGIGKKILVLGVSDLAALPLARKGKVSLTVAS---LDWLDLALTAEEDLTGLNF 127

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           +  +      +   +   ++          +  + +    F    E +     + + +  
Sbjct: 128 HIKIDSGMGRIGFRDSQEAQEAIHRLQAAGAVAEGI-FTHFATADEAEHHKFEAQLARFH 186


>gi|259417981|ref|ZP_05741900.1| metal-activated pyridoxal enzyme [Silicibacter sp. TrichCH4B]
 gi|259346887|gb|EEW58701.1| metal-activated pyridoxal enzyme [Silicibacter sp. TrichCH4B]
          Length = 387

 Score = 39.4 bits (90), Expect = 0.85,   Method: Composition-based stats.
 Identities = 22/180 (12%), Positives = 47/180 (26%), Gaps = 9/180 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTS-- 57
           I+TP  ++D   L  N+       +  G++  +  K   +  +           G     
Sbjct: 27  IQTPCLVLDLDALERNIKKMGDYARAHGMRHRVHGKMHKSVDVAKLQESLGGAVGVCCQK 86

Query: 58  SSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
            S  EV     + G +    +   +D      L+    +   T+  ++   + A      
Sbjct: 87  VSEAEV---FARGGIKDILVSNQVQDAAKIDRLARLPKLGARTIVCVDDLANVADLSAGA 143

Query: 118 I--GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175
              G  I   V                + E  +    +      G+  +           
Sbjct: 144 QKHGTEIECFVEIDCGAGRCGVTTTEAVVEIAQAIDAAAGLKFTGIQAYQGAMQHIDSYE 203


>gi|148508315|gb|ABQ76098.1| Aspartate decarboxylase [uncultured haloarchaeon]
          Length = 119

 Score = 39.4 bits (90), Expect = 0.86,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 17/50 (34%), Gaps = 6/50 (12%)

Query: 310 KPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSY 359
              K+GD I       Y +   N      +PTI        I+ IR  + 
Sbjct: 76  HRAKVGDTIIII---AYTLTPANN---RPVPTIVHVTDTNEIETIRRHTL 119


>gi|99082541|ref|YP_614695.1| D-3-hydroxyaspartate aldolase [Ruegeria sp. TM1040]
 gi|99038821|gb|ABF65433.1| D-3-hydroxyaspartate aldolase [Ruegeria sp. TM1040]
          Length = 387

 Score = 39.4 bits (90), Expect = 0.86,   Method: Composition-based stats.
 Identities = 17/134 (12%), Positives = 39/134 (29%), Gaps = 7/134 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTSSS 59
           I+TP  ++D   L  N+       +  G++  +  K   +  +     +     G     
Sbjct: 27  IQTPCLVLDLDALERNIKKMGDYARAHGMRHRVHGKMHKSVDVAKLQERLGGAIGVCCQK 86

Query: 60  LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCD-----TIIFNTVSQLNKFKDKAQKL 114
           + E  +       +    N      +ID +           +  +  + +      AQK 
Sbjct: 87  VSEAEVFARGGIKDVLVSNQVRDPAKIDRLARLPKLGARTIVCVDDPANVADLSAAAQKH 146

Query: 115 HKKIGLRINPSVSY 128
             +I   +      
Sbjct: 147 DTEIECFVEIDCGA 160


>gi|327194730|gb|EGE61574.1| metal-activated pyridoxal enzyme [Rhizobium etli CNPAF512]
          Length = 387

 Score = 39.4 bits (90), Expect = 0.87,   Method: Composition-based stats.
 Identities = 20/187 (10%), Positives = 48/187 (25%), Gaps = 11/187 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTSSS 59
           I+TP  ++D   L  N+       K   ++     K   +  +     +     G     
Sbjct: 27  IQTPCLILDLDALERNIRKMGDYAKAHNMRHRAHGKMHKSVDVLRLQEKLGGAIGVCCQK 86

Query: 60  LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNC-----DTIIFNTVSQLNKFKDKAQKL 114
           + E  +       +    N      +ID +           +  +  + + +    A+K 
Sbjct: 87  VSEAEVFVRGGIKDVLVSNQVRDPAKIDRLARLPKLGARIIVCVDDPANVAELASAARKH 146

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174
              I   +   V              + + +  K    ++     G+  +          
Sbjct: 147 GTTIECFVEIDVGA----GRCGVSSSAAVVDLAKAIAGAQGLRFAGVQAYQGAMQHIDKY 202

Query: 175 FSAMLKN 181
                K 
Sbjct: 203 ADRKAKL 209


>gi|228965092|ref|ZP_04126189.1| Alanine racemase [Bacillus thuringiensis serovar sotto str. T04001]
 gi|228794636|gb|EEM42145.1| Alanine racemase [Bacillus thuringiensis serovar sotto str. T04001]
          Length = 408

 Score = 39.4 bits (90), Expect = 0.87,   Method: Composition-based stats.
 Identities = 34/335 (10%), Positives = 88/335 (26%), Gaps = 32/335 (9%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60
           ID   + +N++       +  +K++ A+K       A  +     +              
Sbjct: 30  IDLNAVKHNVNEFKKHVNDEKIKMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVDEA 89

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+             Y       ++              +       + A +L KK+ +
Sbjct: 90  IELREAGITVPILILGYTPVAAVEDVIQYDVMMTVYRVEDLHG---INEIANRLQKKVQI 146

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176
           ++      S+  L +            ++    E   V G+   +    E         +
Sbjct: 147 QVKIDTGMSRIGLQEEEVKPF-----LEELNRMEYVEVVGIFTHYSTADEIDKSYTNMQT 201

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIYLE 232
           ++ +           QI +I         +     ++  +        +  K      + 
Sbjct: 202 SLFEKAVNTARELGIQIPYIHSSNSAGSIELSNTFQNMVRVGIGVYGMYPSKEVDHTIVS 261

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287
              A+   +   +      +  +       ++ E  +    +          +       
Sbjct: 262 LQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGYALI 321

Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
                 V GR C+   +  +     PV++GD + F
Sbjct: 322 NGIRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 355


>gi|254454116|ref|ZP_05067553.1| threonine aldolase, low-specificity [Octadecabacter antarcticus
           238]
 gi|198268522|gb|EDY92792.1| threonine aldolase, low-specificity [Octadecabacter antarcticus
           238]
          Length = 387

 Score = 39.4 bits (90), Expect = 0.87,   Method: Composition-based stats.
 Identities = 17/135 (12%), Positives = 31/135 (22%), Gaps = 9/135 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD--GTTS-- 57
           I+TP  ++D   L  N+       K  G++     K   +  +           G     
Sbjct: 27  IQTPCLILDLDALERNVKKMGDYAKAHGMRHRAHGKMHKSVDVLKLQQDMGAAIGVCCQK 86

Query: 58  SSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLS----NCDTIIFNTVSQLNKFKDKAQK 113
            S  EV            +  V                    +  +    +    D A  
Sbjct: 87  VSEAEV-FARGGIKDVMISNQVTEPAKIKRLAEMPKYGCRVLVCVDDPENVKNLSDAAVA 145

Query: 114 LHKKIGLRINPSVSY 128
              +I   +      
Sbjct: 146 AGTQIEALVEVDCGA 160


>gi|226946802|ref|YP_002801875.1| alanine racemase [Azotobacter vinelandii DJ]
 gi|226721729|gb|ACO80900.1| alanine racemase [Azotobacter vinelandii DJ]
          Length = 361

 Score = 39.4 bits (90), Expect = 0.90,   Method: Composition-based stats.
 Identities = 32/235 (13%), Positives = 62/235 (26%), Gaps = 23/235 (9%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDGTTSSSLYEV 63
           LID   L +N       R+  G + L  +K  A    A      L    DG   + + E 
Sbjct: 7   LIDLAALRHNYRL---ARELGGARALAVVKADAYGHGAVRCARALEAEADGFAVACIEEA 63

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN-TVSQLNKFKDKAQKLHKKIGLRI 122
           +   E            + +      +   D      +  QL   +  A        L++
Sbjct: 64  LELREAGIAAPILLLEGFFESAELEPIQRHDLWCVVHSPWQLEAIERTALTRPLTCWLKL 123

Query: 123 NPSVSYSKF---ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK--------- 170
           +  +    F        +      G+  +    S     + L      E           
Sbjct: 124 DSGMHRVGFAPADYRAAHARLMASGKVARIVAMSHFARADELDCPRVAEQLAQFETATAG 183

Query: 171 ---SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFS 222
               F   ++       +F       EW+  G  ++        ++   +L+   
Sbjct: 184 LVAEFSLRNSPALLGWPQFFRHGHGDEWLRPGIMLYGATPFERYQEQAAQLRPVM 238


>gi|256824351|ref|YP_003148311.1| amino acid aldolase or racemase [Kytococcus sedentarius DSM
          20547]
 gi|256687744|gb|ACV05546.1| predicted amino acid aldolase or racemase [Kytococcus sedentarius
          DSM 20547]
          Length = 371

 Score = 39.4 bits (90), Expect = 0.90,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 2/77 (2%)

Query: 4  TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYE 62
          TP+ ++D+ +L  N+D    +  + G  L    K      +     +    G T ++L E
Sbjct: 11 TPFAVVDRDRLQANIDRVARLAADRGQALRPHAKTHKCPQIAALQLEAGASGLTVATLGE 70

Query: 63 VML-GHEKFGGETHAYN 78
            +           AY 
Sbjct: 71 AEVFADAGCTDLLIAYP 87


>gi|228997192|ref|ZP_04156817.1| Alanine racemase [Bacillus mycoides Rock3-17]
 gi|229004853|ref|ZP_04162583.1| Alanine racemase [Bacillus mycoides Rock1-4]
 gi|228756406|gb|EEM05721.1| Alanine racemase [Bacillus mycoides Rock1-4]
 gi|228762586|gb|EEM11508.1| Alanine racemase [Bacillus mycoides Rock3-17]
          Length = 391

 Score = 39.4 bits (90), Expect = 0.91,   Method: Composition-based stats.
 Identities = 25/335 (7%), Positives = 83/335 (24%), Gaps = 32/335 (9%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60
           ++   + +N+        +  + ++ A+K       A  +     +              
Sbjct: 13  VNLDAVKHNVREFKKRVNDKNIAMMAAVKANGYGHGAVEVAKAAIEAGVNQLAVAFVDEG 72

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+             Y       +               +       + A++L KK  +
Sbjct: 73  IELREAGVTVPILVLGYTPVEVAKDAIGYDIMMTVYRIEDLKG---INEIAKQLEKKAHI 129

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENKSF--LCFS 176
           ++          ++        +    ++    +   + G+   +    E         +
Sbjct: 130 QVKID-----TGMSRIGLQEEEVAPFLEELKNMKYIEIEGMFTHYSTADEINKIYTNMQT 184

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIYLE 232
           ++ +            + +I         +     ++  +        +  K      + 
Sbjct: 185 SLFEKAVNAAKEMGIHLPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVDHTVVS 244

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287
              A+   +   +      +  +       ++ E  +    +          +       
Sbjct: 245 LQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGHALI 304

Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
                 V GR C+   +  +     PV++GD + F
Sbjct: 305 NGIRVPVLGRVCMDQ-LMLDVTKAMPVQVGDEVVF 338


>gi|121610311|ref|YP_998118.1| alanine racemase domain-containing protein [Verminephrobacter
          eiseniae EF01-2]
 gi|121554951|gb|ABM59100.1| D-3-hydroxyaspartate aldolase [Verminephrobacter eiseniae EF01-2]
          Length = 372

 Score = 39.4 bits (90), Expect = 0.92,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 22/79 (27%), Gaps = 1/79 (1%)

Query: 2  IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60
          I TP  ++D      N+         AG++L    K      +    +     G     +
Sbjct: 15 IDTPALIVDLDAFERNMKKMAAFADLAGIRLRPHAKTHRCAAIALKQIQMGAVGQCCQKV 74

Query: 61 YEVMLGHEKFGGETHAYNV 79
           E     +    +    N 
Sbjct: 75 GEAEALVQGGVRDIFVSNE 93


>gi|291220866|ref|XP_002730436.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
          Length = 357

 Score = 39.4 bits (90), Expect = 0.93,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 23/82 (28%), Gaps = 2/82 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSS 59
           I TP  ++D  K+  N+D      K     KL    K      +     Q    G     
Sbjct: 26  IDTPALVVDLDKMERNMDKMTEFMKEFPSCKLRPHAKSHKCPAIARMQIQRGAVGVCVQK 85

Query: 60  LYEVMLGHEKFGGETHAYNVAY 81
           + E          +    N  Y
Sbjct: 86  VTEAEAMVNGGIKDVLVTNEIY 107


>gi|332286614|ref|YP_004418525.1| alanine racemase, catabolic [Pusillimonas sp. T7-7]
 gi|330430567|gb|AEC21901.1| alanine racemase, catabolic [Pusillimonas sp. T7-7]
          Length = 388

 Score = 39.4 bits (90), Expect = 0.93,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 54/166 (32%), Gaps = 8/166 (4%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVK---LLLAL-KCFAAWGMFDTLNQYMDGTT--- 56
           +P  LID   + +NL+    +          L+ A+ K  A     +     +       
Sbjct: 24  SPLALIDHTAIRHNLNRLRQLLAYPKTLPTPLIWAVAKADAYGHTLEHAYAGLCEADGLA 83

Query: 57  SSSLYEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
             +L E        + G   A +       ++  +     +I +   QL   +       
Sbjct: 84  VLTLDEARHCRSLGWTGPILAMSAQITQAALEDPILYPLHLIIDHQEQLAAIQSLRPPFS 143

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL 161
             + LR    ++++ F  A     ++ L    +D   +E+ ++   
Sbjct: 144 PHVWLRYRGRLNHAGFDQAGYKSAYASLQSGLRDGRLAELGHLQHY 189


>gi|117923575|ref|YP_864192.1| alanine racemase [Magnetococcus sp. MC-1]
 gi|117607331|gb|ABK42786.1| alanine racemase [Magnetococcus sp. MC-1]
          Length = 396

 Score = 39.4 bits (90), Expect = 0.93,   Method: Composition-based stats.
 Identities = 29/309 (9%), Positives = 79/309 (25%), Gaps = 26/309 (8%)

Query: 5   PYYL-IDKQKLLNNLDTALYIRKNAGVKL-LLAL-KC----FAAWGMFDTLNQYMDGTTS 57
           P +L ID   L +N       R   G ++    + K       A  +  TL +  DG   
Sbjct: 20  PTWLEIDLAALRHN---LRQARTATGPQVAHFPVIKADGYGIGAIAVAHTLEEEADGFCV 76

Query: 58  SSLYEVMLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
           + + E               ++  Y   E  A+ +  +  + + ++    ++        
Sbjct: 77  ALVEEAEQLRTAGINKRIMLFSGLYPGLEERAIRARVEPFLSDEINLNALWQAAKCYGPI 136

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
            + ++I+  ++   +          +L    + K+   + ++       +    +    +
Sbjct: 137 SVHIKIDSGMARLGYHPEHVPSLLDQLAHMPELKLAGLVSHMACAD-DRHSPITNAQLAT 195

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
                          Q+   +    +   +  Y        ++     Y    +     A
Sbjct: 196 LSPILEHPLVKQTQAQLSLANSATILGHPNAHYQW------VRPGIMIYGASPFFPHTNA 249

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHV---PDYLL-----YQESATIYPNTGPY 288
                  +   V  I                         +               +   
Sbjct: 250 ANEGLQPVVRWVTHIQRIHTLEKGKSLGYGHTFTATRPTRIAQLPVGYADGYNRLWSNKG 309

Query: 289 TAMVCGRSC 297
           + ++ G+ C
Sbjct: 310 SVLIAGQHC 318


>gi|332365661|gb|EGJ43419.1| alanine racemase [Streptococcus sanguinis SK1059]
          Length = 369

 Score = 39.4 bits (90), Expect = 0.94,   Method: Composition-based stats.
 Identities = 18/180 (10%), Positives = 46/180 (25%), Gaps = 11/180 (6%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYE 62
           +ID   +  N+            K   A+ K  A    A  +   +   +DG   S++ E
Sbjct: 13  VIDLAAIDFNIRQLSAHLPQTTEK--WAVVKANAYGHGAIEVSRHIEPLVDGFCVSNIDE 70

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
            +       G+            +        ++   +   L              GL  
Sbjct: 71  ALELRSAGIGKKILVLGVSDLAALPLARKGKVSLTVAS---LEWLDLALTAEEDLTGLNF 127

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           +  +      +   +   ++          +  + +    F    E +     + + +  
Sbjct: 128 HIKIDSGMGRIGFRDSQEAQEAIHRLQAAGAVAEGI-FTHFATADEAEHHKFEAQLARFH 186


>gi|332363340|gb|EGJ41125.1| alanine racemase [Streptococcus sanguinis SK49]
          Length = 369

 Score = 39.4 bits (90), Expect = 0.94,   Method: Composition-based stats.
 Identities = 18/180 (10%), Positives = 46/180 (25%), Gaps = 11/180 (6%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYE 62
           +ID   +  N+            K   A+ K  A    A  +   +   +DG   S++ E
Sbjct: 13  VIDLAAIDFNIRQLSAHLPQTTEK--WAVVKANAYGHGAIEVSRHIEPLVDGFCVSNIDE 70

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
            +       G+            +        ++   +   L              GL  
Sbjct: 71  ALELRSAGIGKKILVLGVSDLAALPLARKGKVSLTVAS---LEWLDLALTAEEDLTGLNF 127

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           +  +      +   +   ++          +  + +    F    E +     + + +  
Sbjct: 128 HIKIDSGMGRIGFRDSQEAQEAIHRLQAAGAVAEGI-FTHFATADEAEHHKFEAQLARFH 186


>gi|324990138|gb|EGC22076.1| alanine racemase [Streptococcus sanguinis SK353]
          Length = 369

 Score = 39.4 bits (90), Expect = 0.94,   Method: Composition-based stats.
 Identities = 18/180 (10%), Positives = 46/180 (25%), Gaps = 11/180 (6%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYE 62
           +ID   +  N+            K   A+ K  A    A  +   +   +DG   S++ E
Sbjct: 13  VIDLAAIDFNIRQLSAHLPQTTEK--WAVVKANAYGHGAIEVSRHIEPLVDGFCVSNIDE 70

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
            +       G+            +        ++   +   L              GL  
Sbjct: 71  ALELRSAGIGKKILVLGVSDLAALPLARKGKVSLTVAS---LEWLDLALTAEEDLTGLNF 127

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           +  +      +   +   ++          +  + +    F    E +     + + +  
Sbjct: 128 HIKIDSGMGRIGFRDSQEAQEAIHRLQAAGAVAEGI-FTHFATADEAEHHKFEAQLARFH 186


>gi|323353285|ref|ZP_08087818.1| alanine racemase [Streptococcus sanguinis VMC66]
 gi|322121231|gb|EFX92994.1| alanine racemase [Streptococcus sanguinis VMC66]
          Length = 369

 Score = 39.4 bits (90), Expect = 0.94,   Method: Composition-based stats.
 Identities = 18/180 (10%), Positives = 46/180 (25%), Gaps = 11/180 (6%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYE 62
           +ID   +  N+            K   A+ K  A    A  +   +   +DG   S++ E
Sbjct: 13  VIDLAAIDFNIRQLSAHLPQTTEK--WAVVKANAYGHGAIEVSRHIEPLVDGFCVSNIDE 70

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
            +       G+            +        ++   +   L              GL  
Sbjct: 71  ALELRSAGIGKKILVLGVSDLAALPLARKGKVSLTVAS---LEWLDLALTAEEDLTGLNF 127

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           +  +      +   +   ++          +  + +    F    E +     + + +  
Sbjct: 128 HIKIDSGMGRIGFRDSQEAQEAIHRLQAAGAVAEGI-FTHFATADEAEHHKFEAQLARFH 186


>gi|87311059|ref|ZP_01093183.1| hypothetical protein DSM3645_18606 [Blastopirellula marina DSM
          3645]
 gi|87286150|gb|EAQ78060.1| hypothetical protein DSM3645_18606 [Blastopirellula marina DSM
          3645]
          Length = 371

 Score = 39.4 bits (90), Expect = 0.94,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 22/65 (33%), Gaps = 1/65 (1%)

Query: 1  MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSS 59
          +I TP  +ID   +  NL          G+ +    K   +       L Q   G T + 
Sbjct: 12 LISTPAMVIDLPIVEKNLQKLHSYADQHGLHVRPHTKTHKSRYFARMQLKQGSSGLTVAK 71

Query: 60 LYEVM 64
          + E  
Sbjct: 72 VGEAE 76


>gi|19111844|ref|NP_595052.1| alanine racemase Alr2 [Schizosaccharomyces pombe 972h-]
 gi|12229663|sp|Q9P5N3|ALR2_SCHPO RecName: Full=Putative alanine racemase C359.02
 gi|7838267|emb|CAB91571.1| alanine racemase Alr2 [Schizosaccharomyces pombe]
          Length = 370

 Score = 39.4 bits (90), Expect = 0.96,   Method: Composition-based stats.
 Identities = 44/336 (13%), Positives = 90/336 (26%), Gaps = 33/336 (9%)

Query: 8   LIDKQKLLNNLDTALYIR--KNAGVKLLLALKCFA----AWGMFDTLNQYMD--GTTSSS 59
           +ID + +  N +    +   KN    +L  LK  A    A  +   L +Y    G   +S
Sbjct: 7   VIDLRAIGYNYNLIRELLDEKNPDAHILCILKANAYGHGAVEVAQFLAKYCSAEGFGVAS 66

Query: 60  LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           + E +                +   E +  L +          +            K + 
Sbjct: 67  IEEALELRLSGIQNRILLLEGFFTDEDELSLIDKYNFSITIHCEEQLKSFMNYPFKKPVE 126

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE-NKSFLCFSAM 178
           + +      ++                 K ++    KNV+G++   +             
Sbjct: 127 VHLKLDSGMNRLGFTPAEYAD-------KYRLLKNHKNVSGIVKATHFAFADIPEKSEYT 179

Query: 179 LKNIEKEFGHFITQIEWISLGGG---IHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
           LK             + +S GGG   + + +  +        +    + Y +        
Sbjct: 180 LKQWRIFEKAAGCLPDPLSAGGGVIVVGWLNTIHMDWLRTGSMLYGLDPYDLDAKAPELP 239

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLY-----------QESATIYPN 284
             +     L +T++ +    K+  I          D L+            Q        
Sbjct: 240 KPLIPAMKLMSTIVCVKHVEKDQPIGYGGAYVTTRDSLIGVVAIGYGDGFPQVRNGCPVI 299

Query: 285 TGPYTAMVCGRSCLAGDIFGEFHFE-KPVKIGDRIS 319
                    G+ C   D+      +   VK GD + 
Sbjct: 300 INGKRVPTVGKVC--MDMLAIDVTDVPDVKRGDDVV 333


>gi|254496840|ref|ZP_05109691.1| metal-activated pyridoxal enzyme [Legionella drancourtii LLAP12]
 gi|254353967|gb|EET12651.1| metal-activated pyridoxal enzyme [Legionella drancourtii LLAP12]
          Length = 375

 Score = 39.4 bits (90), Expect = 1.00,   Method: Composition-based stats.
 Identities = 18/165 (10%), Positives = 45/165 (27%), Gaps = 6/165 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           + TP  ++DK  L +NLD          + L    K      +      Y   G  ++ +
Sbjct: 13  LDTPCLVLDKDILRSNLDVMRQHVITNKINLRPHCKTHKCSKLAQLQIDYGAIGVCAAKI 72

Query: 61  YEVMLGHEKFGGETHAYNV----AYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
            E  +  +         +           +  + +   T++     +     + A +  +
Sbjct: 73  SEAEVLIQNRIPNVLITSPIVTKNKITRLMACIETAPATLVVVDNEENILALNHAGESCQ 132

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL 161
           K+ + +   V                   K       ++  +   
Sbjct: 133 KM-IHVLVDVDSGIGRTGVKPEHALNFAMKISALPWLKLMGIQCY 176


>gi|254501148|ref|ZP_05113299.1| Alanine racemase, N-terminal domain family [Labrenzia alexandrii
           DFL-11]
 gi|222437219|gb|EEE43898.1| Alanine racemase, N-terminal domain family [Labrenzia alexandrii
           DFL-11]
          Length = 351

 Score = 39.4 bits (90), Expect = 1.00,   Method: Composition-based stats.
 Identities = 32/259 (12%), Positives = 62/259 (23%), Gaps = 17/259 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSS-- 58
           I+TP  L+D      N++         G+ L   +K      +    LN    G T    
Sbjct: 6   IQTPAVLVDLDIAEANIEAYQAYCTKHGLALRPHIKTHKLPFLAKRQLNAGAIGITCQKI 65

Query: 59  SLYEVMLGHEKFGGETHAYN---VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
           S  E M+           +N       +           +++ +  S +    D      
Sbjct: 66  SEAEAMIADGGINDVLITFNILGAEKLERLKALARKVRLSVVADNTSTVKGLSDAFSDTD 125

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK--IESEIKNVNGLMFHNNCENKSFL 173
             + + +               R      E  +D   + ++   +               
Sbjct: 126 SPLTVLVECDTGA--------ERCGVTSPEAAQDLAQVINQSPGLTFGGLMTYPPAGREA 177

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
                L            Q+  IS GG      +   V    +            +    
Sbjct: 178 EVHDWLTKARDMIEADALQVAVISNGGS-PGMWQADAVPVATEYRIGTYVYNDRSLVERG 236

Query: 234 GEAIVTNTTTLNTTVLDIS 252
                    T+  TV+ + 
Sbjct: 237 VCDWGDCALTVLATVVSVP 255


>gi|317034639|ref|XP_001400774.2| hypothetical protein ANI_1_238124 [Aspergillus niger CBS 513.88]
          Length = 416

 Score = 39.4 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 20/181 (11%), Positives = 52/181 (28%), Gaps = 15/181 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD--GTTSSS 59
           + TP  ++ K  L  N++      +  G+     +K      +   +       G  +S+
Sbjct: 19  LPTPSLILSKPVLEKNINRLQQDVQELGLSFRPHVKTLKTLEITRLMLANGLHRGLIAST 78

Query: 60  LYEVM----LGHEKFGGETHA------YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109
           L E+     L  E    E           + +      +  +    I+ ++   +   + 
Sbjct: 79  LSELRGVLPLAEEGILNEALYGLPIYPSALPHLHSMRQSHPNLNILIMVDSPQHIPVIEA 138

Query: 110 KAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE--SEIKNVNGLMFHNNC 167
             +         +   +       A  +      G + ++ +    E   V    F+ + 
Sbjct: 139 FNKSTPNVRPWPVFIKLDV-GSRRAGVDVYSPDSGPELEELVNVVEESSAVELYGFYCHA 197

Query: 168 E 168
            
Sbjct: 198 G 198


>gi|134081446|emb|CAK41927.1| unnamed protein product [Aspergillus niger]
          Length = 424

 Score = 39.4 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 20/181 (11%), Positives = 52/181 (28%), Gaps = 15/181 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD--GTTSSS 59
           + TP  ++ K  L  N++      +  G+     +K      +   +       G  +S+
Sbjct: 19  LPTPSLILSKPVLEKNINRLQQDVQELGLSFRPHVKTLKTLEITRLMLANGLHRGLIAST 78

Query: 60  LYEVM----LGHEKFGGETHA------YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109
           L E+     L  E    E           + +      +  +    I+ ++   +   + 
Sbjct: 79  LSELRGVLPLAEEGILNEALYGLPIYPSALPHLHSMRQSHPNLNILIMVDSPQHIPVIEA 138

Query: 110 KAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE--SEIKNVNGLMFHNNC 167
             +         +   +       A  +      G + ++ +    E   V    F+ + 
Sbjct: 139 FNKSTPNVRPWPVFIKLDV-GSRRAGVDVYSPDSGPELEELVNVVEESSAVELYGFYCHA 197

Query: 168 E 168
            
Sbjct: 198 G 198


>gi|134294396|ref|YP_001118131.1| carotenoid oxygenase [Burkholderia vietnamiensis G4]
 gi|134137553|gb|ABO53296.1| Carotenoid oxygenase [Burkholderia vietnamiensis G4]
          Length = 443

 Score = 39.4 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/261 (8%), Positives = 56/261 (21%), Gaps = 13/261 (4%)

Query: 38  CFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTI 96
                 +     + +      +   +    +  G    HA                 + I
Sbjct: 102 ANPNVSVLRHAGELLALAEGGAPLAITAALDTLGEPARHAGLGGAMTAHPKLDPVTGELI 161

Query: 97  IFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK 156
           +F    +    +      +    + +   V     +          L             
Sbjct: 162 LFRADWREPWLRYGVADAYGVQRVDMVVDVRAPSMMHDLAITETRSLLLDL--------- 212

Query: 157 NVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGI-HFTDKDYPVKDFC 215
           NV          ++  L +                 + W  +           Y     C
Sbjct: 213 NVGYDFAMLKQGHRMPLRWHDERDARIGVLPRHGGDVRWFGIEPCFIQHVVNAYDCDPSC 272

Query: 216 QRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAH--VPDYL 273
             L      + +++    G         L   V+D +  + +   +         + +  
Sbjct: 273 IVLDVVRYPWFLRLDARTGRFADNPVGELWRYVIDTANGLIDEGPLADGGIELPRIDESR 332

Query: 274 LYQESATIYPNTGPYTAMVCG 294
             +    +Y    P +A + G
Sbjct: 333 TGRSYRYLYAAEQPDSAEMRG 353


>gi|159474868|ref|XP_001695545.1| hypothetical protein CHLREDRAFT_175110 [Chlamydomonas reinhardtii]
 gi|158275556|gb|EDP01332.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 390

 Score = 39.4 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 12/85 (14%), Positives = 21/85 (24%), Gaps = 3/85 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKN-AGVKLLLALKCFAAWGMFDT-LNQYMD-GTTSS 58
           + TP  ++D      N +    +     GV +    K      +    L      G    
Sbjct: 44  VDTPALILDLDAFDRNCEKLKGVMAGFPGVAVRPHAKAHKCAEVARRQLQLLGAKGVCCQ 103

Query: 59  SLYEVMLGHEKFGGETHAYNVAYKD 83
            + E     E    +    N     
Sbjct: 104 KVIEAEAMAEGGVSDLLLSNEVIAP 128


>gi|257469535|ref|ZP_05633627.1| Serine racemase [Fusobacterium ulcerans ATCC 49185]
 gi|317063779|ref|ZP_07928264.1| serine racemase [Fusobacterium ulcerans ATCC 49185]
 gi|313689455|gb|EFS26290.1| serine racemase [Fusobacterium ulcerans ATCC 49185]
          Length = 369

 Score = 39.0 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 65/211 (30%), Gaps = 15/211 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           +KTP  L++   L NN+ T   +  + G +L   +K   +  +     +    G    +L
Sbjct: 6   LKTPAILLNFDALENNIKTYQKMCDDNGKELWPMIKTHKSMELLKLQIEAGATGALCGTL 65

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSN-----CDTIIFNTVSQLNKFKDKAQKLH 115
            E        G +   Y       E    +          +  + +       D A    
Sbjct: 66  DEAEACCR-IGLKKIMYAYPAASKESIERIIELTKKSDFIVRLDNLEAAKMINDMAIAAG 124

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVN---GLMFHNNCEN--- 169
             +   I             P        +K KD    +++ ++   G ++   CEN   
Sbjct: 125 VVVSYTIIVDSGL--HRFGLPVDKIVEFADKLKDMKGLKLRGLSTHPGHVYSATCENEVP 182

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGG 200
           K        +   +K       ++E+I+ G 
Sbjct: 183 KYIADECQTIAAAKKYMNDAGYELEYITSGS 213


>gi|332827252|gb|EGK00022.1| hypothetical protein HMPREF9455_03611 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 367

 Score = 39.0 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 26/272 (9%), Positives = 77/272 (28%), Gaps = 23/272 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD----GTTS 57
           I +P  ++  +++  N+D A+ I +    KL   +K      +   + +         T 
Sbjct: 13  IDSPALVVYPERIQENIDLAIQIARGTN-KLRPHVKTNKMREVCAIMLKSGITKYKCATI 71

Query: 58  SSLYEV--------MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109
           +    +        +L ++  G +        K                +         D
Sbjct: 72  AEAEMLALVNAPDVLLAYQPVGPKIERLIELIKAYPDTRFSCL-----VDNEENAKAISD 126

Query: 110 KAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN 169
             ++ +  + + I+ ++   +  +         L +   D     I  ++G   H + E+
Sbjct: 127 LCRENNITLNIFIDLNIGMDRTGIKPEKAID--LVQAIIDLPRIHIAGLHGYDGHIHDED 184

Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKE---FSEKYS 226
               C  + +     E  +   +         +      +P+    +  +        + 
Sbjct: 185 TEIRCKKSDISFALAEKAYKEIKPLLPHPIALVMGGTPTFPIHIHRENCECSPGTFVFWD 244

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNL 258
                   +        + + V+ I ++    
Sbjct: 245 WGYKHMLEDLPFKYAAVVISRVISIIDSTHIC 276


>gi|170736332|ref|YP_001777592.1| alanine racemase domain-containing protein [Burkholderia
           cenocepacia MC0-3]
 gi|169818520|gb|ACA93102.1| alanine racemase domain protein [Burkholderia cenocepacia MC0-3]
          Length = 376

 Score = 39.0 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 47/172 (27%), Gaps = 11/172 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  LID   +  N+          GV+    +K      + D  +     G T S+L
Sbjct: 6   LNTPAALIDVAHMQRNIARMQTHLDALGVRFRPHVKTTKCQQVVDAQIAAGAQGITVSTL 65

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDA-----VLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E        G     Y V     ++              I+ +++   +     A    
Sbjct: 66  KEAEQFFAD-GIRDIVYAVGMVPAKLGQALALRRQGCDLKIVADSLPAAHAI--AAFGRE 122

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
                 +   V         P  P + L       +      + G++ H   
Sbjct: 123 HGERFDVWIEVDVDGHRSGIP--PDADLLIDVGRALTDGGMLLGGVLAHAGS 172


>gi|85706729|ref|ZP_01037821.1| threonine aldolase, low-specificity [Roseovarius sp. 217]
 gi|85668787|gb|EAQ23656.1| threonine aldolase, low-specificity [Roseovarius sp. 217]
          Length = 387

 Score = 39.0 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 54/187 (28%), Gaps = 13/187 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTS--- 57
           I+TP  ++D   L  N+       ++ G++  +  K      +    L + + G      
Sbjct: 27  IQTPCLVLDLDALERNIKKMGDWARDHGMRHRVHGK--MHKSVDVALLQESLGGACGVCC 84

Query: 58  --SSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ--K 113
              S  EV     + G +    +   +D      L+    +   T+  ++   + A    
Sbjct: 85  QKVSEAEV---FARGGIKDVLVSNQVRDPAKIDRLARMPKLGARTICCVDDLTNVADLSA 141

Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFL 173
             +K G +I   V                + E  K    +      G+  +         
Sbjct: 142 AAQKHGTQIECLVEIDCGAGRCGVTTTPAVVEIAKAIDAAPGLKFAGIQAYQGAMQHMDK 201

Query: 174 CFSAMLK 180
                 K
Sbjct: 202 YEDRKAK 208


>gi|229043862|ref|ZP_04191559.1| Alanine racemase [Bacillus cereus AH676]
 gi|228725487|gb|EEL76747.1| Alanine racemase [Bacillus cereus AH676]
          Length = 408

 Score = 39.0 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 34/335 (10%), Positives = 87/335 (25%), Gaps = 32/335 (9%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60
           ID   + +N+        +  +K++ A+K       A  +     +              
Sbjct: 30  IDLDAVKHNVKEFKKHVNDEEIKMMAAVKANGYGHGAVEVAKAAIEAGIHQLAVAFVDEA 89

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+             Y       ++              +       + A +L KK+ +
Sbjct: 90  IELREAGITVPILILGYTPVAAVEDVIQYDVMMTVYRVEDLHG---INEIANRLQKKVQI 146

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176
           ++      S+  L +            ++    E   V G+   +    E         +
Sbjct: 147 QVKIDTGMSRIGLQEEEVKPF-----LEELNRMEYVEVVGIFTHYSTADEIDKSYTNMQT 201

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIYLE 232
           ++ +           QI +I         +     ++  +        +  K      + 
Sbjct: 202 SLFEKAVNTAKELGIQIPYIHSSNSAGSMELSNTFQNMVRVGIGVYGMYPSKEVDHSVVS 261

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287
              A+   +   +      +  +       ++ E  +    +          +       
Sbjct: 262 LQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGYALI 321

Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
                 V GR C+   +  +     PV++GD + F
Sbjct: 322 NGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 355


>gi|148543492|ref|YP_001270862.1| alanine racemase [Lactobacillus reuteri DSM 20016]
 gi|184152900|ref|YP_001841241.1| alanine racemase [Lactobacillus reuteri JCM 1112]
 gi|227363641|ref|ZP_03847755.1| alanine racemase [Lactobacillus reuteri MM2-3]
 gi|325681836|ref|ZP_08161355.1| alanine racemase [Lactobacillus reuteri MM4-1A]
 gi|166969414|sp|A5VI51|ALR_LACRD RecName: Full=Alanine racemase
 gi|226711051|sp|B2G5M9|ALR_LACRJ RecName: Full=Alanine racemase
 gi|148530526|gb|ABQ82525.1| alanine racemase [Lactobacillus reuteri DSM 20016]
 gi|183224244|dbj|BAG24761.1| alanine racemase [Lactobacillus reuteri JCM 1112]
 gi|227071310|gb|EEI09619.1| alanine racemase [Lactobacillus reuteri MM2-3]
 gi|324978927|gb|EGC15875.1| alanine racemase [Lactobacillus reuteri MM4-1A]
          Length = 375

 Score = 39.0 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/192 (11%), Positives = 60/192 (31%), Gaps = 11/192 (5%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDT-LNQYMDGTTSSSLYE 62
           ++D   L +N+     +      K+L  +K  A       +  T +     G   + L E
Sbjct: 12  IVDLDALRHNIQEQKKVLPE-NSKILAVVKANAYGNGLIPVAQTAMTSGASGLCVAILDE 70

Query: 63  VMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            +   +      T    +   +  + A  +   ++   ++  L ++   AQ    K  L+
Sbjct: 71  ALELRDNGIEAMTLVLGITSVEDALIAAQAG-VSLTVGSLDWLEQYHQLAQVAKPKKPLK 129

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           ++  +      +        +   +    ++S      G+  H    +     +      
Sbjct: 130 VHLGIDSGMGRIGFTEVAAFK---QAVKLLDSPEFEFEGMFTHFATADSPDENYFNQQVQ 186

Query: 182 IEKEFGHFITQI 193
              +F   + ++
Sbjct: 187 RWHQFVASLAEL 198


>gi|325681053|ref|ZP_08160585.1| alanine racemase [Ruminococcus albus 8]
 gi|324107282|gb|EGC01566.1| alanine racemase [Ruminococcus albus 8]
          Length = 374

 Score = 39.0 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 32/335 (9%), Positives = 70/335 (20%), Gaps = 25/335 (7%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWG----MFDTL-----NQYMDGTTSSS 59
           ID   +  N+     +   AG +L+  +K          +   L      +Y        
Sbjct: 11  IDLSAVEYNVTEYKKLLP-AGTELMYVVKAACYGHDDSLIVPFLQEKLGAEYFAVAD--- 66

Query: 60  LYEV-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
           L E   L      G+         +        N      +        K+    +    
Sbjct: 67  LDEAIRLRGMGISGDILILGYTLPEYAPLIAKHNVIQACTDLSYARELSKNAEGTVRVHG 126

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
            +    +         +     S +       +E    + +        ++      +  
Sbjct: 127 AVDTGMTRIGVHGTAEEQAAELSEIAATPNIALEGIFTHFSSADGTAQADDDYTNMQAER 186

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE-AI 237
              +         +++   +                 +        Y       P E   
Sbjct: 187 FFRVRDLLTAGGIELKHAHIKNSAGGAYGFGEGSTLARLGIIMYGLYPDPAKPLPFEPKP 246

Query: 238 VTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP----DYLLYQESATIYPNTGP-----Y 288
           V     + + V  I              +  +                  N G       
Sbjct: 247 VMTWKAVVSQVKWIDAGTAVSYGRTFVSDRRMKLATITAGYADGYPRALSNKGEVIIGGK 306

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDV 323
              +CGR C+      +      ++ GD     D 
Sbjct: 307 RCRICGRVCMDQ-FMCDVTDLPDIRSGDEAILMDA 340


>gi|148907442|gb|ABR16854.1| unknown [Picea sitchensis]
          Length = 43

 Score = 39.0 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 17/38 (44%), Gaps = 1/38 (2%)

Query: 328 INRKNWFNGINMPTIAVKNVDGTIKAIRE-FSYNDYYN 364
           ++  + +N  + P       DG++K IR    + D+  
Sbjct: 1   MSMASCYNLKSRPPEYWVADDGSVKKIRHVEMFEDHLR 38


>gi|317127511|ref|YP_004093793.1| alanine racemase domain protein [Bacillus cellulosilyticus DSM
           2522]
 gi|315472459|gb|ADU29062.1| alanine racemase domain protein [Bacillus cellulosilyticus DSM
           2522]
          Length = 367

 Score = 39.0 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 74/204 (36%), Gaps = 11/204 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           I+TP  ++D++KL  N+D  + + ++ GV +    K   +  +    + +   G T ++ 
Sbjct: 7   IETPALILDEKKLNKNIDRMMKVSEH-GVTIRPHFKTHKSVWIAKRQIEKGASGITVATA 65

Query: 61  YEVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCD---TIIFNTVSQLNKFKDKAQKLHK 116
            E  L  E        A+ +A        +  +      +  ++  Q+   +  A++L  
Sbjct: 66  SEAELLFENGLTDILLAFPLADPVRLKKLLKWSKRARLILTVDSEEQVKIIEAIAKELIV 125

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
              + I  +      +      P        +    +E  ++ G+  H    + +  C  
Sbjct: 126 TPEVWIKVNSG----LNRCGVEPGVEAFNLAECINNTETLDLTGMYTHAG-HSYAAKCEE 180

Query: 177 AMLKNIEKEFGHFITQIEWISLGG 200
            + +  ++E    +  +E     G
Sbjct: 181 EVNRIAKQEAESILRSVELCEKNG 204


>gi|90421986|ref|YP_530356.1| alanine racemase-like [Rhodopseudomonas palustris BisB18]
 gi|90104000|gb|ABD86037.1| alanine racemase-like [Rhodopseudomonas palustris BisB18]
          Length = 393

 Score = 39.0 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 34/99 (34%), Gaps = 2/99 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSL 60
           + TP  L+D+ +L  N+ T     +  GV     LK      +      +  G  T S+L
Sbjct: 21  LATPCLLLDEARLRGNVATMKRHLEMLGVGFRPHLKTAKCLEVARIAMTHPGGPATVSTL 80

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN 99
            E          +   Y V     ++D V +       +
Sbjct: 81  REAEFFAAGGVRDMI-YAVGIAPQKLDRVGAIRKRFGAD 118


>gi|325690295|gb|EGD32299.1| alanine racemase [Streptococcus sanguinis SK115]
          Length = 369

 Score = 39.0 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/180 (10%), Positives = 46/180 (25%), Gaps = 11/180 (6%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYE 62
           +ID   +  N+            K   A+ K  A    A  +   +   +DG   S++ E
Sbjct: 13  VIDLAAIDFNIRQLSAHLPQTTEK--WAVVKANAYGHGAIEVSRHIEPLVDGFCVSNIDE 70

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
            +       G+            +        ++   +   L              GL  
Sbjct: 71  ALELRSAGIGKKILALGVSDLAALPLARKGKVSLTVAS---LEWLDLALTAEEDLTGLNF 127

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           +  +      +   +   ++          +  + +    F    E +     + + +  
Sbjct: 128 HIKIDSGMGRIGFRDSQEAQEAIHRLQAAGAVAEGI-FTHFATADEAEHHKFEAQLTRFH 186


>gi|296532599|ref|ZP_06895304.1| alanine racemase domain protein [Roseomonas cervicalis ATCC 49957]
 gi|296267090|gb|EFH13010.1| alanine racemase domain protein [Roseomonas cervicalis ATCC 49957]
          Length = 352

 Score = 39.0 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 33/260 (12%), Positives = 67/260 (25%), Gaps = 15/260 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           ++TP  +ID   +  NL        + G+ L   +K      +     +    G T   L
Sbjct: 6   LETPVPVIDLDVVEANLARMQAYCDSHGIALRPHIKTHKLPALARRQVELGARGITCQKL 65

Query: 61  YEVM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCD---TIIFNTVSQLNKFKDKAQKLHK 116
            E   +          +Y +                   +  +    L    + A+    
Sbjct: 66  GEAEVMVEAGIDDILMSYPLLGAAKAARLAKLAPRARFRVGLDNAQSLATVAEAARLSGA 125

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
           +IG+ +      ++  +         L E  +    +     +G+M +            
Sbjct: 126 EIGILVEFDSGTARTGVMTI----EELLELARAARATPGLRFDGVMTYPLG-----PKAR 176

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
           A L            +   IS GGG     + +      +                    
Sbjct: 177 AFLDAALPRLKAEGLEPAVIS-GGGTPKAFEAHAAAPITELRVGTYIYNDRMTVAAGHAT 235

Query: 237 IVTNTTTLNTTVLDISENIK 256
                  L+ TV+   E  +
Sbjct: 236 WADCALHLHVTVISRPEAHR 255


>gi|70922820|ref|XP_734515.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56507329|emb|CAH84777.1| hypothetical protein PC301232.00.0 [Plasmodium chabaudi chabaudi]
          Length = 194

 Score = 39.0 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 9/35 (25%), Positives = 14/35 (40%)

Query: 292 VCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGY 326
           + G+SC   D+     +     I D I +E    Y
Sbjct: 160 IYGQSCDGLDMITSSTYLPECNINDWIIYEYSGAY 194


>gi|254502163|ref|ZP_05114314.1| Alanine racemase, N-terminal domain family [Labrenzia alexandrii
           DFL-11]
 gi|222438234|gb|EEE44913.1| Alanine racemase, N-terminal domain family [Labrenzia alexandrii
           DFL-11]
          Length = 387

 Score = 39.0 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/134 (11%), Positives = 38/134 (28%), Gaps = 7/134 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTSSS 59
           I+TP  ++D   L  N+       K  G++  +  K   +  +     +     G     
Sbjct: 27  IQTPCLVLDLDALERNIKKMGDYAKAHGMRHRVHGKMHKSVDVAKLQERLGGAVGVCCQK 86

Query: 60  LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCD-----TIIFNTVSQLNKFKDKAQKL 114
           + E  +       +    N      +I  +           +  + +  + +    A + 
Sbjct: 87  VSEAEVFARGGIKDVLVSNQVRDPAKIKRLAQLPKLGARTLVCVDDIDNVAELSAAAVEA 146

Query: 115 HKKIGLRINPSVSY 128
              + + I      
Sbjct: 147 GTTLEVFIEIDCGA 160


>gi|213025495|ref|ZP_03339942.1| diaminopimelate decarboxylase [Salmonella enterica subsp.
          enterica serovar Typhi str. 404ty]
          Length = 81

 Score = 39.0 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 4/42 (9%), Positives = 11/42 (26%), Gaps = 5/42 (11%)

Query: 5  PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFD 46
          P ++ D   +   +             +  A K  +   +  
Sbjct: 45 PVWVYDAHIIRRQIAALQQFDV-----VRFAQKACSNIHILP 81


>gi|163747972|ref|ZP_02155301.1| hypothetical protein OIHEL45_19411 [Oceanibulbus indolifex HEL-45]
 gi|161378769|gb|EDQ03209.1| hypothetical protein OIHEL45_19411 [Oceanibulbus indolifex HEL-45]
          Length = 173

 Score = 39.0 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 32/94 (34%), Gaps = 2/94 (2%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSLY 61
            TP  L+D+ ++  N+          GV L   LK   +  +   L     G  T S+L 
Sbjct: 10  DTPALLLDEARMERNISRLASHADALGVALRPHLKTAKSIDVARRLAGGTPGPITVSTLA 69

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT 95
           E        G     Y V     ++  + +  + 
Sbjct: 70  EAE-VFFAAGHSDILYAVGIAPQKLKRIQALREK 102


>gi|33151809|ref|NP_873162.1| alanine racemase [Haemophilus ducreyi 35000HP]
 gi|71152228|sp|Q7VNC9|ALR_HAEDU RecName: Full=Alanine racemase
 gi|33148030|gb|AAP95551.1| alanine racemase [Haemophilus ducreyi 35000HP]
          Length = 374

 Score = 39.0 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 33/256 (12%), Positives = 70/256 (27%), Gaps = 21/256 (8%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYEV 63
           I +Q L +N+     +        LLA+ K  A          TL   +DG   + L+E 
Sbjct: 8   ISRQALRHNIQLIKKLAPKQK---LLAMIKANAYGQGLLPAAATLADLVDGFGVARLHEA 64

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRI 122
           +   E            + D E      +     + + + QL   +  A++   +   R 
Sbjct: 65  LEVQETGYTGKILLVEGFFDREELLKTLSRGFDTVIHCLEQLELLEQVAKEWQIEQQKRF 124

Query: 123 NPSVSYSKFILADPNRPF---SRLGEKCKD-----KIESEIKNVNGLMFHNN-CENKSFL 173
               +   F +    +      RLG   +              V  + F ++        
Sbjct: 125 WQRKTKIYFPINIWLKIDTGMHRLGIHPEQVDLFYARLKSCPLVATISFMSHFSRADELD 184

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
           C     +    E           S+                 + ++     + +  + +P
Sbjct: 185 CGYTEQQIATFEMATEQYSAHSRSIAASSGILYWPQAHY---EWVRPGIIMHGISPHYQP 241

Query: 234 GEAIVTNTTTLNTTVL 249
              +        ++ L
Sbjct: 242 ITQLGFKPVMTLSSTL 257


>gi|315649168|ref|ZP_07902258.1| alanine racemase [Paenibacillus vortex V453]
 gi|315275387|gb|EFU38745.1| alanine racemase [Paenibacillus vortex V453]
          Length = 395

 Score = 39.0 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 47/203 (23%), Gaps = 16/203 (7%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLA-LKCFA----AWGMFDTLNQYM-DGTTSSSLYE 62
           I+   L  N +             LLA +K  A    A  +   L Q      + + L E
Sbjct: 12  INLDHLRANYNVFREAL--PKHMELLACVKANAYGHGAVEVARELQQLGAAYLSVAFLDE 69

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
            +   +                 ++       TI   +   L   K    K  K + + I
Sbjct: 70  ALELRQGGISIPILVLGYTPPEAVETAYEYDVTITLFSSEVLKAIKALPVKPEKPLKVHI 129

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENKSFLCFSAMLK 180
                    +      P        ++        V G+   F    E+          +
Sbjct: 130 KIDSG----MGRLGLLPGEDALTFIEEACSLPQVVVEGMFTHFARADEHNKDYTLEQYRR 185

Query: 181 NI--EKEFGHFITQIEWISLGGG 201
                         I  I  G  
Sbjct: 186 FQGVADALRDKGYHIPIIHTGNS 208


>gi|332360532|gb|EGJ38342.1| alanine racemase [Streptococcus sanguinis SK1056]
          Length = 369

 Score = 39.0 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/180 (10%), Positives = 46/180 (25%), Gaps = 11/180 (6%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYE 62
           +ID   +  N+            K   A+ K  A    A  +   +   +DG   S++ E
Sbjct: 13  VIDLAAIAFNIRQLSAHLPQTTEK--WAVVKANAYGHGAIEVSRHIEPLVDGFCVSNIDE 70

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
            +       G+            +        ++   +   L              GL  
Sbjct: 71  ALELRSAGIGKKILVLGVSDLAALPLARKGKVSLTVAS---LEWMDLALDAEEDLTGLNF 127

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           +  +      +   +   ++          +  + +    F    E   +   + + +  
Sbjct: 128 HIKIDSGMGRIGFRDSQEAQEVIHRLQAAGAVAEGI-FTHFATADEVDHYKFEAQLARFH 186


>gi|325473141|gb|EGC76337.1| alanine racemase [Treponema denticola F0402]
          Length = 379

 Score = 39.0 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 25/201 (12%), Positives = 61/201 (30%), Gaps = 13/201 (6%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA--AWGM---FDTLNQYMDGTTSSSLYE 62
           +I    L  N+           VK+ L +K  A     +      +   +     +S+ E
Sbjct: 7   IIHLDNLQYNIKEIKKRLNK-NVKICLPVKADAYGHGAVRVAVAAIRAGVSYLAVASIQE 65

Query: 63  V-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
              L          + ++   +   + +  + + ++ +     +     A+KL+KK G+ 
Sbjct: 66  AVELREAGIVAPIISLSLPVLEEIPELLKYDIEPLVIDEEFIND-LNRFAKKLNKKAGVH 124

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +          +           +       +E   + G+  H    + +        K 
Sbjct: 125 LKID-----TGMRRIGCSPMEAVKLAVQIDRAENLELKGVCTHFAVSDSTDEKNIKFTKK 179

Query: 182 IEKEFGHFITQIEWISLGGGI 202
               F   I +I+   +  G+
Sbjct: 180 QISVFKDSIKEIKKAGINPGL 200


>gi|239624944|ref|ZP_04667975.1| D-threonine aldolase [Clostridiales bacterium 1_7_47_FAA]
 gi|239521330|gb|EEQ61196.1| D-threonine aldolase [Clostridiales bacterium 1_7_47FAA]
          Length = 374

 Score = 39.0 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/208 (10%), Positives = 57/208 (27%), Gaps = 11/208 (5%)

Query: 4   TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSLYE 62
           TP  +     +  N+  A+ +    G  L   +K      M    +   +     +++ E
Sbjct: 15  TPALVYYLDIIKENIKKAVDLAGGPGY-LWPHVKTHKMAQMVRLQMEAGITRFKCATIAE 73

Query: 63  VMLGHEKFGGETHAY------NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
             +      G           N++     + A    C   + +   Q+        +   
Sbjct: 74  AEMAAGCGAGHVLVAYPLVGPNISRFIQLMQAYPKVCFWTVGDNEDQIRALGQLCSEAGL 133

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLM---FHNNCENKSFL 173
           +  + ++ ++   +  +   +     +     D +     +               K   
Sbjct: 134 RANVLVDVNLGMDRTGVPVKDTEAFFMDCALMDGVSMMGLHCYDGHRTEHDFTQRKKEAD 193

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGG 201
             +A +K I           + + LGG 
Sbjct: 194 TSAAQIKTICSHLCEKGYSCKTLVLGGS 221


>gi|228989810|ref|ZP_04149790.1| hypothetical protein bpmyx0001_5790 [Bacillus pseudomycoides DSM
           12442]
 gi|228996000|ref|ZP_04155656.1| hypothetical protein bmyco0003_5960 [Bacillus mycoides Rock3-17]
 gi|229003617|ref|ZP_04161433.1| hypothetical protein bmyco0002_5900 [Bacillus mycoides Rock1-4]
 gi|228757659|gb|EEM06888.1| hypothetical protein bmyco0002_5900 [Bacillus mycoides Rock1-4]
 gi|228763773|gb|EEM12664.1| hypothetical protein bmyco0003_5960 [Bacillus mycoides Rock3-17]
 gi|228769957|gb|EEM18540.1| hypothetical protein bpmyx0001_5790 [Bacillus pseudomycoides DSM
           12442]
          Length = 390

 Score = 39.0 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 36/328 (10%), Positives = 94/328 (28%), Gaps = 17/328 (5%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTT---SSSLY 61
           P   +D++ L  N+++ + +     V++  A K   +  +   +             S  
Sbjct: 12  PCAFLDEEALERNIESIVQLCGGKKVRI--ASKSLRSVPVMKKILASNSCFQGIMCFSPR 69

Query: 62  EVM-LGHEKFGGETHAYN-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
           EV+ L  + F      Y     +  +  ++L+    II   V  +       +   +  G
Sbjct: 70  EVIFLIKQGFNDLLLGYPVHDEQALQEISLLTKQGFIITCMVDCIEHIAYLEKIAIETGG 129

Query: 120 -LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
             RI   +  S                   + +    K +   +     +    + + A 
Sbjct: 130 RFRICIDIDMSSHFFQFHFGVRRSPIRTTSEALNVIEKAIQSSVL----QIDGVMGYEAQ 185

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIV 238
           +  +  +      + + +S    +        ++     ++   E+     ++  G    
Sbjct: 186 IAGVGDDVPKQGFKNKIVSY---LKRKSVFEVMERRQSVVRALQEQGITLRFVNGGGTGS 242

Query: 239 TNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCL 298
             TT  + +V +I+                +        +  I      +     G   +
Sbjct: 243 IKTTMQDESVTEITIGSAFYSPKLFDYYKDIRFEPAVGFALPIVRQPSQHIYTCLGGGYM 302

Query: 299 AGDIFGEFHFEKPVKI-G-DRISFEDVA 324
           A    G+    +  +  G   ++ E   
Sbjct: 303 ASGAVGKDKQPEIWEPSGAKLLALEGAG 330


>gi|149201464|ref|ZP_01878439.1| alanine racemase-like protein [Roseovarius sp. TM1035]
 gi|149145797|gb|EDM33823.1| alanine racemase-like protein [Roseovarius sp. TM1035]
          Length = 387

 Score = 39.0 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 54/187 (28%), Gaps = 13/187 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTS--- 57
           I+TP  ++D   L  N+       ++ G++  +  K      +    L + + G      
Sbjct: 27  IQTPCLVLDLDALERNIKKMGDWARDHGMRHRVHGK--MHKSVDVALLQESLGGACGVCC 84

Query: 58  --SSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ--K 113
              S  EV     + G +    +   +D      L+    +   T+  ++   + A    
Sbjct: 85  QKVSEAEV---FARGGIKDVLVSNQVRDPAKIDRLARMPKLGARTICCVDDLTNVADLSA 141

Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFL 173
             +K G +I   V                + E  K    +      G+  +         
Sbjct: 142 AAQKHGTQIECLVEIDCGAGRCGVTTTPAVVEIAKAIDAAPGLKFAGIQAYQGAMQHMDK 201

Query: 174 CFSAMLK 180
                 K
Sbjct: 202 YEDRKAK 208


>gi|119900214|ref|YP_935427.1| alanine racemase [Azoarcus sp. BH72]
 gi|166919546|sp|A1KCI5|ALR_AZOSB RecName: Full=Alanine racemase
 gi|119672627|emb|CAL96541.1| alanine racemase [Azoarcus sp. BH72]
          Length = 353

 Score = 39.0 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 43/141 (30%), Gaps = 8/141 (5%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDGTTSSSLYEV 63
           LID   L +N       R   G + L  +K  A    A      L    DG   + L E 
Sbjct: 7   LIDLDALRHNYRL---ARSRHGGRALAVVKANAYGHGAVRCAQALAAEADGFAVAFLDEA 63

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTV-SQLNKFKDKAQKLHKKIGLRI 122
           +        +T        D      +            +Q+   +  A      I L++
Sbjct: 64  LELRAAGITQTIVLLEGVFDAAELEQVVAHGLWPVVHHAAQIEMIEQAALARPLDIWLKV 123

Query: 123 NPSVSYSKFILADPNRPFSRL 143
           N  ++ + F+       + RL
Sbjct: 124 NSGMNRAGFVGDAVGSAWQRL 144


>gi|148360017|ref|YP_001251224.1| metal-activated pyridoxal enzyme [Legionella pneumophila str.
          Corby]
 gi|296108162|ref|YP_003619863.1| metal-activated pyridoxal enzyme [Legionella pneumophila 2300/99
          Alcoy]
 gi|148281790|gb|ABQ55878.1| metal-activated pyridoxal enzyme [Legionella pneumophila str.
          Corby]
 gi|295650064|gb|ADG25911.1| metal-activated pyridoxal enzyme [Legionella pneumophila 2300/99
          Alcoy]
          Length = 397

 Score = 39.0 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 26/65 (40%), Gaps = 1/65 (1%)

Query: 2  IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
          + TP  +ID +KL +NL+         G+ +    K      +     +Y   G +++ L
Sbjct: 34 LDTPCLVIDYEKLKHNLEIMQQHGFTWGIGIRPHCKTHKCTQIARLQLEYGAIGISAAKL 93

Query: 61 YEVML 65
           E   
Sbjct: 94 SEAAA 98


>gi|89092607|ref|ZP_01165560.1| alanine racemase [Oceanospirillum sp. MED92]
 gi|89083119|gb|EAR62338.1| alanine racemase [Oceanospirillum sp. MED92]
          Length = 358

 Score = 39.0 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 34/332 (10%), Positives = 91/332 (27%), Gaps = 36/332 (10%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDGTTSSSLYEVM 64
           I  + + +N   A  +  + G   +  +K  A    A  +   L+   DG   + + E +
Sbjct: 9   ISLEAIRHNYSLAKSVAPDQGALAI--IKANAYGHGAVEVAKALSDIADGFGVACIEEAI 66

Query: 65  LGHEKFGGETH-----AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
              E             ++    D      L         +++Q++           KI 
Sbjct: 67  ELREAGIKLPILLLEGFFSADELDYISRENLWCAVH----SLAQIDIIAAAKIDTPIKIW 122

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           L+++  +        D    + RL +        ++K V  +   ++ +       +  +
Sbjct: 123 LKMDSGMHRLGVAPDDYQEAYQRLNDLT------QVKEVVLMTHFSSADEPDLAVTAEQI 176

Query: 180 KNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
              +K        +   +  G + + +     +             +     +     + 
Sbjct: 177 ALFDKVTQGIEADVSLANSAGTMAYPEARRSWQRPG----IMLYGATPFAMPQEVADKLK 232

Query: 240 NTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCG 294
              TL++ V+ + +                    V    +                +V G
Sbjct: 233 PAMTLSSEVIAVRDLEPGEAVGYSCTWVCDKPTRVGTVAMGYADGYPRYAKSGTPVLVNG 292

Query: 295 RSCL-----AGDIFGEFHFE-KPVKIGDRISF 320
           +        + D+      +    ++G  + F
Sbjct: 293 QKSQIIGRVSMDMLAVDLTDIPDAEVGSYVEF 324


>gi|169824891|ref|YP_001692502.1| alanine racemase [Finegoldia magna ATCC 29328]
 gi|167831696|dbj|BAG08612.1| alanine racemase [Finegoldia magna ATCC 29328]
          Length = 391

 Score = 39.0 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 46/342 (13%), Positives = 95/342 (27%), Gaps = 33/342 (9%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYM-DGTTSSSLYEV 63
           +D  KL +N      I     VK+   +K  A    A  +   L     D    S++ E 
Sbjct: 10  VDLDKLKHNYKEIKNISNL--VKMCAVVKANAYGQGAAFITKELEYLGIDYFAVSNINEA 67

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +   +    +         +  I+  + N   +         +  + A+ L+K   + I 
Sbjct: 68  LELRKNGIFKPIMILGYISNENIEVAIKNNIELTVYDYDTAVEINNVAKSLNKICKVHIK 127

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
                ++            L E        ++ NV     +++  +     +S   +   
Sbjct: 128 IDTGMTRLGFQVRLDRDKCLEEI---FKIYKMDNVVLQGIYSHFSDADSEDYSYTKEQYN 184

Query: 184 KEFGHF------ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI 237
              G           +    +          Y   D  +        ++     E     
Sbjct: 185 TYIGFMIDVENRGITVPIKHIANDAGAIIHGY-FLDMIRCGIGLYGYHASDYVRENSRLN 243

Query: 238 VTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL-------LYQESATIYPNTG---- 286
           +   ++L TTV  I    K   I          + +                 N      
Sbjct: 244 LEEISSLYTTVSMIKTVPKGTDIGYGRTFTTNSETVVATATIGYADGYPLELSNKAYVII 303

Query: 287 -PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE---DVA 324
               A + G+ C+   I  +  + + VK+GD++      D+ 
Sbjct: 304 NGKKAKILGKVCMDQ-IMIDVTYIRDVKVGDKVLLFGKDDMG 344


>gi|90577958|ref|ZP_01233769.1| threonine aldolase, low-specificity [Vibrio angustum S14]
 gi|90441044|gb|EAS66224.1| threonine aldolase, low-specificity [Vibrio angustum S14]
          Length = 368

 Score = 39.0 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/136 (11%), Positives = 32/136 (23%), Gaps = 8/136 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           + TP  ++D  K+ NN+           + L    K   +  +          G  ++ L
Sbjct: 6   LPTPALIVDFDKMKNNIHEMQQRIDALQLNLRPHTKAHKSPTIAKMQIDAGAQGICTAKL 65

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCE-------IDAVLSNCDTIIFNTVSQLNKFKDKAQK 113
            E  +       +           +                  + +    +    + A  
Sbjct: 66  GEAEVMAAGGINDILITTPIAGKNKIQRLVKLYQQYPDYRFIQVIDHKQHIIDISEAATD 125

Query: 114 LHKKIGLRINPSVSYS 129
               I L I       
Sbjct: 126 AGICIELMIEVESGQQ 141


>gi|163740918|ref|ZP_02148311.1| hypothetical protein RG210_13796 [Phaeobacter gallaeciensis 2.10]
 gi|161385909|gb|EDQ10285.1| hypothetical protein RG210_13796 [Phaeobacter gallaeciensis 2.10]
          Length = 382

 Score = 39.0 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 47/133 (35%), Gaps = 5/133 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSL 60
           ++TP  ++D+ K++ N+          GV L   LK   +  +   L     G  T S+L
Sbjct: 11  LQTPALVLDETKMMRNIQRLAKQVDGLGVSLRPHLKTVKSTEISRRLLTDGSGPATVSTL 70

Query: 61  YEVMLGHEKFGGETH---AYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHK 116
            E  +  E    +            D         CD  ++ ++V+Q +   D + +L  
Sbjct: 71  IEAEVFAEAGVKDIIYAVGITPQKLDRVAAIRSKGCDLAVVLDSVAQAHAVADASARLGL 130

Query: 117 KIGLRINPSVSYS 129
            I   I       
Sbjct: 131 AIPALIELDCDGH 143


>gi|311032754|ref|ZP_07710844.1| alanine racemase domain protein [Bacillus sp. m3-13]
          Length = 390

 Score = 38.6 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 57/170 (33%), Gaps = 10/170 (5%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLY 61
            TP  ++D Q LL N+       K   V L   +K   +  +     ++   G T++ L 
Sbjct: 9   DTPTLILDGQILLKNIRKMSDFAKENKVNLRPHIKTHKSVEIAKLQLEHGAIGITTAKLE 68

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCD-----TIIFNTVSQLNKFKDKAQKLHK 116
           E  +       +           +I+ +++  D      I  +++ Q+   +   +K   
Sbjct: 69  EAEVMAASGIKDILVAYPVSSPAKIERIIALLDQEVDLKITVDSLEQVKLLQKALEKTSH 128

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNN 166
            + + I  +      +      P  R  E  K  I      + G+  H  
Sbjct: 129 SLEVWIKVNSG----LNRCGVEPGERAVELAKAIILLSRLRIGGIFTHAG 174


>gi|254510187|ref|ZP_05122254.1| threonine aldolase, low-specificity [Rhodobacteraceae bacterium
           KLH11]
 gi|254512679|ref|ZP_05124745.1| threonine aldolase, low-specificity [Rhodobacteraceae bacterium
           KLH11]
 gi|221532678|gb|EEE35673.1| threonine aldolase, low-specificity [Rhodobacteraceae bacterium
           KLH11]
 gi|221533898|gb|EEE36886.1| threonine aldolase, low-specificity [Rhodobacteraceae bacterium
           KLH11]
          Length = 387

 Score = 38.6 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/134 (12%), Positives = 39/134 (29%), Gaps = 7/134 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTSSS 59
           I+TP  ++D   L  N+       K  G++  +  K   +  +     +     G     
Sbjct: 27  IQTPCLVLDLDALERNIVKMGDYAKAHGMRHRVHGKMHKSVDVAKLQEKLGGAIGVCCQK 86

Query: 60  LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSN-----CDTIIFNTVSQLNKFKDKAQKL 114
           + E  +       +    N      +ID +           +  + V  +      A K 
Sbjct: 87  VSEAEVFARGGIKDVLVSNQVRDPAKIDRLARLPKLGAHVIVCVDDVDNVADLSAAAVKH 146

Query: 115 HKKIGLRINPSVSY 128
             ++ + +      
Sbjct: 147 GTELSVFVEIDCGA 160


>gi|303234171|ref|ZP_07320817.1| alanine racemase [Finegoldia magna BVS033A4]
 gi|302494712|gb|EFL54472.1| alanine racemase [Finegoldia magna BVS033A4]
          Length = 391

 Score = 38.6 bits (88), Expect = 1.4,   Method: Composition-based stats.
 Identities = 46/342 (13%), Positives = 95/342 (27%), Gaps = 33/342 (9%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYM-DGTTSSSLYEV 63
           +D  KL +N      I     VK+   +K  A    A  +   L     D    S++ E 
Sbjct: 10  VDLDKLKHNYKEIKNISNL--VKMCAVVKANAYGQGAAFITKELEYLGIDYFAVSNINEA 67

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +   +    +         +  I+  + N   +         +  + A+ L+K   + I 
Sbjct: 68  LELRKNGIFKPIMILGYISNENIEVAIKNNIELTVYDYDTAVEINNVAKSLNKICKVHIK 127

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
                ++            L E        ++ NV     +++  +     +S   +   
Sbjct: 128 IDTGMTRLGFQVRLDHDKCLEEI---FKIYKMDNVVLQGIYSHFSDADSEDYSYTKEQYN 184

Query: 184 KEFGHF------ITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI 237
              G           +    +          Y   D  +        ++     E     
Sbjct: 185 TYIGFMIDVENRGITVPIKHIANDAGAIIHGY-FLDMIRCGIGLYGYHASDYVRENSRLN 243

Query: 238 VTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL-------LYQESATIYPNTG---- 286
           +   ++L TTV  I    K   I          + +                 N      
Sbjct: 244 LEEISSLYTTVSMIKTVPKGTDIGYGRTFTTNSETVVATATIGYADGYPLELSNKAYVII 303

Query: 287 -PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE---DVA 324
               A + G+ C+   I  +  + + VK+GD++      D+ 
Sbjct: 304 NGKKAKILGKVCMDQ-IMIDVTYIRDVKVGDKVLLFGKDDMG 344


>gi|220926980|ref|YP_002502282.1| alanine racemase domain-containing protein [Methylobacterium
          nodulans ORS 2060]
 gi|219951587|gb|ACL61979.1| alanine racemase domain protein [Methylobacterium nodulans ORS
          2060]
          Length = 359

 Score = 38.6 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 28/83 (33%), Gaps = 2/83 (2%)

Query: 3  KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLY 61
           +P  +ID  ++  N+         AG+     +K   +  +     +    G T  +L 
Sbjct: 13 GSPAVMIDLDQVERNIARLQAACDAAGLANRPHIKTHKSPVLARLQQEAGARGLTCQTLG 72

Query: 62 EVM-LGHEKFGGETHAYNVAYKD 83
          E   +          +YN+   +
Sbjct: 73 EAEVMAEAGLSDILISYNLVGPE 95


>gi|325693570|gb|EGD35489.1| alanine racemase [Streptococcus sanguinis SK150]
          Length = 369

 Score = 38.6 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/180 (10%), Positives = 46/180 (25%), Gaps = 11/180 (6%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYE 62
           +ID   +  N+            K   A+ K  A    A  +   +   +DG   S++ E
Sbjct: 13  VIDLAAIAFNIRQLSAQLPQTTEK--WAVVKANAYGHGAIEVSRYIEPLVDGFCVSNIDE 70

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
            +       G+            +        ++   +   L              GL  
Sbjct: 71  ALELRSAGIGKKILVLGVSDLAALSLARKGKVSLTVAS---LEWLDLALTAEEDLTGLNF 127

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           +  +      +   +   ++          +  + +    F    E +     + + +  
Sbjct: 128 HIKIDSGMGRIGFRDSQEAQEAIHRLQAAGAVAEGI-FTHFATADEAEHHKFEAQLARFH 186


>gi|33591729|ref|NP_879373.1| putative metal-activated pyridoxal enzyme [Bordetella pertussis
           Tohama I]
 gi|33571372|emb|CAE44851.1| putative metal-activated pyridoxal enzyme [Bordetella pertussis
           Tohama I]
 gi|332381147|gb|AEE65994.1| putative metal-activated pyridoxal enzyme [Bordetella pertussis CS]
          Length = 381

 Score = 38.6 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 42/172 (24%), Gaps = 11/172 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60
           + TP  ++D  ++ +N+          GV L   +K      +    L     G T S+L
Sbjct: 12  LDTPAAIVDVARMQHNIARMQDRMNGLGVSLRPHVKTSKCTPVALAQLAAGAHGVTVSTL 71

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCE-----IDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E        G     Y V   +                 II +         D      
Sbjct: 72  KEAEQFFAA-GITDILYAVGMAEHRLPAALALRRRGCDLKIITDNAGSARAIAD--FGRA 128

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
                 +   +           +P           +      + G+M H   
Sbjct: 129 HDEVFEVWIEIDTDGHR--SGIKPEEAALLAVGAALHEGGMRLGGVMTHAGS 178


>gi|307320836|ref|ZP_07600246.1| alanine racemase domain protein [Sinorhizobium meliloti AK83]
 gi|306893546|gb|EFN24322.1| alanine racemase domain protein [Sinorhizobium meliloti AK83]
          Length = 352

 Score = 38.6 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/258 (10%), Positives = 63/258 (24%), Gaps = 14/258 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           I+TP  L+D      N+          G+++   +K      M +        G T   +
Sbjct: 5   IETPAVLVDLDIARRNVVAFQAYADRHGIRVRPHIKTHKLPQMAELQLDTGAIGITCQKV 64

Query: 61  YEVML---GHEKFGGETHAYN---VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL 114
            E      G  +       YN                   +++ +  + ++         
Sbjct: 65  TEAEAMVDGSARIKDVLITYNLLGEEKLARLARLNERVTVSVVGDNATVVDGLAAFFADA 124

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174
            K + + +  +         D     +        +  +E   +                
Sbjct: 125 GKPLTVLVECNTGA------DRCGVGTPSEAARLARRIAEAPGLRFGGLMTYPPADGAAR 178

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG 234
             A +   ++       ++  I+ GG                R   +       +     
Sbjct: 179 VQAFMSEAKRLIEAEGLEVPCITSGGTPGMMQAAEAPIASEHRPGTYIY-NDRSLVARGV 237

Query: 235 EAIVTNTTTLNTTVLDIS 252
            +      T+  TV+ + 
Sbjct: 238 ASWEDCALTVLATVVSVP 255


>gi|290993126|ref|XP_002679184.1| predicted protein [Naegleria gruberi]
 gi|284092800|gb|EFC46440.1| predicted protein [Naegleria gruberi]
          Length = 437

 Score = 38.6 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 42/138 (30%), Gaps = 13/138 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-----LNQYMDGTT 56
           +KTP +++D ++   N    +    + G+ L   +K               L + +    
Sbjct: 64  MKTPCFVVDLERFERNCQNMIKKASDCGISLRPHVKTHKTLEGARLQTKDMLERKIV--- 120

Query: 57  SSSLYEVMLGHEKFGGETH----AYNVAYKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKA 111
            S+L E          + H      + +  +       +     I  +    L+  +D A
Sbjct: 121 VSTLAEAEFYGSDMFNDIHYAVPISSKSKLEQVAKLTQNLKAFHIEVDNEDSLDLIEDYA 180

Query: 112 QKLHKKIGLRINPSVSYS 129
           +    K  L +       
Sbjct: 181 KLNKVKFSLFVQVDSGQH 198


>gi|163760387|ref|ZP_02167469.1| alanine racemase-like protein [Hoeflea phototrophica DFL-43]
 gi|162282338|gb|EDQ32627.1| alanine racemase-like protein [Hoeflea phototrophica DFL-43]
          Length = 387

 Score = 38.6 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/135 (12%), Positives = 35/135 (25%), Gaps = 9/135 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTS-- 57
           I+TP  ++D   L  N+       K+ GV+  +  K   +  +     +     G     
Sbjct: 27  IQTPCLVLDLDALERNIIKMGEQAKSMGVRHRVHGKMHKSVDVAKLQERLGGAVGVCCQK 86

Query: 58  SSLYEVMLGHEKFGGETHAY---NVAYKDCEIDAVLSNCDTIIF-NTVSQLNKFKDKAQK 113
            S  E             +    +    D           TI   +  + +      A +
Sbjct: 87  VSEAEA-FARGGIKDVLISNQVRDPLKIDRLARMPKLGARTICCVDDAANIADLSQAAVR 145

Query: 114 LHKKIGLRINPSVSY 128
               +   +      
Sbjct: 146 HGTMVECLVEIDCGA 160


>gi|328945680|gb|EGG39831.1| alanine racemase [Streptococcus sanguinis SK1087]
          Length = 369

 Score = 38.6 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/180 (9%), Positives = 45/180 (25%), Gaps = 11/180 (6%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYE 62
           +ID   +  N+            K   A+ K  A    A  +   +   +DG   S++ E
Sbjct: 13  VIDLAAIAFNIRQLSAHLPQTTEK--WAVVKANAYGHGAIEVSRHIEPLVDGFCVSNIDE 70

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
            +        +            +        ++   +   L              GL  
Sbjct: 71  ALELRSAGISKKILVLGVSDLAALPLSRKGKVSLTVAS---LEWLDLALDAEEDLTGLNF 127

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           +  +      +   +   ++          +  + +    F    E +     + + +  
Sbjct: 128 HIKIDSGMGRIGFRDSQEAQEVIHRLQAAGAVAEGI-FTHFATADEAEHHKFEAQLARFH 186


>gi|187779310|ref|ZP_02995783.1| hypothetical protein CLOSPO_02906 [Clostridium sporogenes ATCC
           15579]
 gi|187772935|gb|EDU36737.1| hypothetical protein CLOSPO_02906 [Clostridium sporogenes ATCC
           15579]
          Length = 386

 Score = 38.6 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 51/160 (31%), Gaps = 5/160 (3%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA-AWGMFDTLNQYMD-GTTSSSLYEVM 64
           Y+ID   +++N           G++L    K F     +   L +    G  +    E +
Sbjct: 31  YIIDLDNIVDNARKIKEEADKYGIELYFMTKQFGRNPIVCHELMKLGYKGAVTVDFKEAI 90

Query: 65  LGHEKFGGETHAYNVAYKDCEIDAVLS--NCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
              E      H  ++          +     + I   +V +  +    AQKL     + I
Sbjct: 91  TLKENNISLGHVGHLVQIPTHSMEDIIEAKPEVITVYSVEKAVEVSKVAQKLGLVQNIMI 150

Query: 123 NPSVSYSKFILADPNRPFSR-LGEKCKDKIESEIKNVNGL 161
                      A     + + L EK K+  +    N+ G+
Sbjct: 151 RVLDDEDTLYPAQYGGFYLKDLIEKAKEIKKLPNINIYGI 190


>gi|126668086|ref|ZP_01739049.1| putative D-b-hydroxy-aspartate aldolase [Marinobacter sp. ELB17]
 gi|126627477|gb|EAZ98111.1| putative D-b-hydroxy-aspartate aldolase [Marinobacter sp. ELB17]
          Length = 387

 Score = 38.6 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 17/135 (12%), Positives = 36/135 (26%), Gaps = 9/135 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTSSS 59
           I+TP  ++D   L  N+       K  G++  +  K   +  +           G     
Sbjct: 27  IQTPCLILDLDALERNIKKMGDYAKAHGMRHRVHGKMHKSVDVARLQEDLGGAIGVCCQK 86

Query: 60  LYEVML-GHEKFGGETHAYNVAYKDCEIDA-----VLSNCDTIIFNTVSQLNKFKDKAQK 113
             E  +        +    N      +ID             +  + V  ++      QK
Sbjct: 87  PSEAEVFARAGI-KDVLVSNQVRDPLKIDRLAQLPKYGGRIIVCVDDVDNVSDLSMACQK 145

Query: 114 LHKKIGLRINPSVSY 128
              ++   +      
Sbjct: 146 HSTELHCFVEIDCGA 160


>gi|119944622|ref|YP_942302.1| arginine decarboxylase [Psychromonas ingrahamii 37]
 gi|119863226|gb|ABM02703.1| arginine decarboxylase [Psychromonas ingrahamii 37]
          Length = 637

 Score = 38.6 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 36/324 (11%), Positives = 85/324 (26%), Gaps = 51/324 (15%)

Query: 5   PYYLIDKQKLLNNLDTALYIRKNA--------GVKLLLALKCFAAWGMFDTLNQYMD--- 53
           P  +   Q +   ++    +  NA           L+  +K      + + +    D   
Sbjct: 62  PALVRFPQIIHQRVNGLCEVFNNAIEQYQYNEKYLLVYPIKVNQQREVVNEILASQDNKE 121

Query: 54  ----GTTSSSLYEVMLGHEKF--GGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVS 102
               G  + S  E++               N       +        L +   ++   +S
Sbjct: 122 VKQLGLEAGSKAELLAVLALAQKASSVIVCNGYKDREYVRLALIGEKLGHKVHLVLEKMS 181

Query: 103 QLNKFKDKAQKLHKKIGLRINPS-VSYSKFILADPNRPFSRLGEKCKDKIESEI------ 155
           +L     +A+KL+    L I     S  K          S+ G      ++         
Sbjct: 182 ELEMILSEAKKLNVAPRLGIRVRLASQGKGKWQASGGEKSKFGLSASQVLKVLDVLKENN 241

Query: 156 --KNVNGLMFHNNCE---NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDK--- 207
               +  + FH   +    +      +       E      +I  + +GGG+        
Sbjct: 242 KLDTLQLVHFHLGSQIANIRDVRLGVSEAARFYCELRDLGAEITCMDVGGGLAVDYDGTR 301

Query: 208 -------DYPVKDFCQRLKEFSEKYS-------VQIYLEPGEAIVTNTTTLNTTVLDISE 253
                  +Y + ++   +                 I  E G ++  +   L + V+    
Sbjct: 302 SQSHNSMNYSLAEYANNIVYTIGDICKSYDQPVPMIISESGRSLTAHHAVLISNVIGAES 361

Query: 254 NIKNLVIVDSSVEAHVPDYLLYQE 277
                +      ++ +   +    
Sbjct: 362 YAPEKLTNPKKNDSLLLKNMWQSW 385


>gi|326939811|gb|AEA15707.1| alanine racemase [Bacillus thuringiensis serovar chinensis CT-43]
          Length = 391

 Score = 38.6 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 32/335 (9%), Positives = 86/335 (25%), Gaps = 32/335 (9%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60
           ID   + +N+        +  +K++ A+K       A  +     +              
Sbjct: 13  IDLNAVKHNVKEFKKHVNDEEIKMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVDEA 72

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+             Y       ++              +       + A +L KK+ +
Sbjct: 73  IELREAGITVPILILGYTPVAAVEDVIQYDVMMTVYRVEDLHG---INEIANRLQKKVQI 129

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176
           ++          ++        +    ++    E   V G+   +    E         +
Sbjct: 130 QVKID-----TGMSRIGLQEEEVKPFLEELNRMEYIEVVGIFTHYSTADEIDKSYTNMQT 184

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIYLE 232
           ++ +           QI +I         +     ++  +        +  K      + 
Sbjct: 185 SLFEKAVNTAKELGIQIPYIHSSNSAGSMELSNTFQNMVRVGIGVYGMYPSKEVDHSVVS 244

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287
              A+   +   +      +  +       ++ E  +    +          +       
Sbjct: 245 LQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGYALI 304

Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
                 V GR C+   +  +     PV++GD + F
Sbjct: 305 NGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 338


>gi|324995181|gb|EGC27093.1| alanine racemase [Streptococcus sanguinis SK678]
 gi|327469131|gb|EGF14603.1| alanine racemase [Streptococcus sanguinis SK330]
 gi|327473513|gb|EGF18933.1| alanine racemase [Streptococcus sanguinis SK408]
 gi|327489061|gb|EGF20856.1| alanine racemase [Streptococcus sanguinis SK1058]
          Length = 369

 Score = 38.6 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/180 (10%), Positives = 47/180 (26%), Gaps = 11/180 (6%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYE 62
           +ID   +  N+            K   A+ K  A    A  +   +   +DG   S++ E
Sbjct: 13  VIDLAAIAFNIRQLSAHLPQTTEK--WAVVKANAYGHGAIEVSRHIEPLVDGFCVSNIDE 70

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
            +       G+            +        ++   +   L+             GL  
Sbjct: 71  ALELRSAGIGKKILVLGVSDLAALPLARKGKVSLTVAS---LDWLDLALDAEEDLTGLNF 127

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           +  +      +   +   ++          +  + +    F    E +     + + +  
Sbjct: 128 HIKIDSGMGRIGFRDSQEAQEAIHRLQVAGAVAEGI-FTHFATADEAEHHKFEAQLARFH 186


>gi|75343523|sp|O82872|DTA_ARTSP RecName: Full=D-threonine aldolase
 gi|3299792|dbj|BAA31547.1| metal-activated pyridoxal enzyme [Arthrobacter sp.]
          Length = 379

 Score = 38.6 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 24/210 (11%), Positives = 49/210 (23%), Gaps = 12/210 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60
           + TP  ++D      NL           V L    K      +    L     G     +
Sbjct: 24  VDTPSLVLDLAPFEANLRAMQAWADRHDVALRPHAKAHKCPEIALRQLALGARGICCQKV 83

Query: 61  YEVM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
            E +            +  V                 I   V   +     +Q +  + G
Sbjct: 84  SEALPFVAAGIQDIHISNEVVGPAKLALLGQLARVAKISVCVDNAHNLSQVSQAMV-QAG 142

Query: 120 LRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKS-------- 171
            +I+  V              + +    +   +    N  GL  ++              
Sbjct: 143 AQIDVLVEVDVGQGRCGVSDDALVLALAQQARDLPGVNFAGLQAYHGSVQHYRTREERAE 202

Query: 172 -FLCFSAMLKNIEKEFGHFITQIEWISLGG 200
                + +  +  +         + I+ GG
Sbjct: 203 VCRQAARIAASYAQLLRESGIACDTITGGG 232


>gi|256828939|ref|YP_003157667.1| alanine racemase domain-containing protein [Desulfomicrobium
          baculatum DSM 4028]
 gi|256578115|gb|ACU89251.1| alanine racemase domain protein [Desulfomicrobium baculatum DSM
          4028]
          Length = 382

 Score = 38.6 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 30/83 (36%), Gaps = 4/83 (4%)

Query: 3  KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSLY 61
           TP  L+D++++  N+       + A V     LK   +W +   L     G  T S+L 
Sbjct: 13 GTPCLLVDEERMERNIARLRDRLRAAEVAFRPHLKTAKSWEVSRLLMTTPQGPATVSTLR 72

Query: 62 EV-MLGHEKFGGETHAYNVAYKD 83
          E   L       +   Y V    
Sbjct: 73 EAEELAAHGV--KDITYAVGISP 93


>gi|330501216|ref|YP_004378085.1| alanine racemase [Pseudomonas mendocina NK-01]
 gi|328915502|gb|AEB56333.1| alanine racemase [Pseudomonas mendocina NK-01]
          Length = 357

 Score = 38.6 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 47/141 (33%), Gaps = 8/141 (5%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDGTTSSSLYEV 63
           LID   L +N       R+ +G + L  +K  A    A      L    DG   + + E 
Sbjct: 7   LIDLDALRHNYQL---ARELSGARALAVVKADAYGHGAVRCAQALEAEADGFAVACIEEA 63

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNT-VSQLNKFKDKAQKLHKKIGLRI 122
           +   E   G        + + +  A++   D         Q+   +         + L++
Sbjct: 64  LALREAGIGAPILLLEGFFETDELALIDQHDLWCVVHAQWQIEAIEQAQLSKPLSVWLKL 123

Query: 123 NPSVSYSKFILADPNRPFSRL 143
           +  +       +D  + + RL
Sbjct: 124 DSGMHRVGLHPSDYQQAYRRL 144


>gi|253576997|ref|ZP_04854320.1| alanine racemase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251843607|gb|EES71632.1| alanine racemase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 392

 Score = 38.6 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 22/203 (10%), Positives = 47/203 (23%), Gaps = 16/203 (7%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYM-DGTTSS---SL 60
           ID   L +N +     +++  +     +K  A    A  +   L Q   D  + +     
Sbjct: 12  IDLDALRSNFEELRRRQQDMKMLAC--VKANAYGHGAVPVAKELEQIGADYLSVAFLDEA 69

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+     +       Y        +     +  T+   +   L   +            
Sbjct: 70  LELRKAGIQLPILVLGYTP---PHGVRTAWEHDVTLNVFSNEVLEAIEALNPAEFPHKLK 126

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
                 S    +   P         K       E++ +    +    E           +
Sbjct: 127 VHIKIDSGMGRVGLLPGDEAVAFVRKAMQVPHVEVEGL-FTHYATADEEDKSYTLEQYRR 185

Query: 181 NI--EKEFGHFITQIEWISLGGG 201
                +       +I  I  G  
Sbjct: 186 FQGVVEALREHNIRIPIIHTGNS 208


>gi|262402336|ref|ZP_06078897.1| alanine racemase [Vibrio sp. RC586]
 gi|262351118|gb|EEZ00251.1| alanine racemase [Vibrio sp. RC586]
          Length = 407

 Score = 38.6 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 51/167 (30%), Gaps = 10/167 (5%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKC----FAAWGMFD-TLNQYMDGTTSSSLYEV 63
           I   +  +N++       N+  K+   +K         G+    + Q +     +S  E 
Sbjct: 47  ISLGQFQSNIEQFKSHM-NSDTKICAIMKADAYGNGIRGLMPTIIAQGILCVGVASNAEA 105

Query: 64  MLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
               E  F GE      A        +  N + +I      +    + A+K  K + + +
Sbjct: 106 RAVRESGFKGELIRVRSASLSEMSAVLDLNIEELIGTHQQAME-LAELAKKNGKTVKVHM 164

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN 169
             +         D      +  ++          N+ G+M H    N
Sbjct: 165 ALNDGGMGRNGIDMTTEAGK--KEAVSIATQPSLNIVGIMTHFPNYN 209


>gi|253744161|gb|EET00405.1| Hypothetical protein GL50581_2360 [Giardia intestinalis ATCC 50581]
          Length = 731

 Score = 38.6 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 42/147 (28%), Gaps = 6/147 (4%)

Query: 13  KLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLG-HEKFG 71
            L     T   I   +    + ALK F    +   L        +    E+ L    KF 
Sbjct: 21  TLRELFGTLSVILNKSASSTIYALKGFPNLAV-KELRVGSLEACAVRDMELELAILPKFS 79

Query: 72  -GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSK 130
                 Y+ A +D E   ++ N        +   +K   + +    +  +        S 
Sbjct: 80  HPHILKYHQALRDGETIYIIMNRHQRTVENMLVRHK---RTKHPIPEQKILCILEQVASG 136

Query: 131 FILADPNRPFSRLGEKCKDKIESEIKN 157
                 +      G+   D +   +K+
Sbjct: 137 LAYLHDSNKTDVNGDHLPDIVHRNVKH 163


>gi|261409040|ref|YP_003245281.1| alanine racemase [Paenibacillus sp. Y412MC10]
 gi|261285503|gb|ACX67474.1| alanine racemase [Paenibacillus sp. Y412MC10]
          Length = 395

 Score = 38.6 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 39/159 (24%), Gaps = 12/159 (7%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLA-LKCFA----AWGMFDTLNQYM-DGTTSSSLYE 62
           I+   L  N +             LLA +K  A    A  +   L Q      + + L E
Sbjct: 12  INLDHLRANYNAFREAL--PDHMKLLACVKANAYGHGAVEVARELQQLGAAYLSVAFLDE 69

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
            +   +                 +        TI   +   L   K    K  K + + I
Sbjct: 70  AIELRQGGISVPILVLGYTPPEAVGIAYEYDVTITLFSSEVLQAIKALPVKPEKPLKVHI 129

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL 161
                    +      P        ++        V G+
Sbjct: 130 KIDSG----MGRLGLLPGEDAISFIEEAFSLPQVVVEGM 164


>gi|253583474|ref|ZP_04860672.1| alanine racemase [Fusobacterium varium ATCC 27725]
 gi|251834046|gb|EES62609.1| alanine racemase [Fusobacterium varium ATCC 27725]
          Length = 364

 Score = 38.6 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 42/331 (12%), Positives = 81/331 (24%), Gaps = 29/331 (8%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMD-GTTSSSLYEV 63
           ID   L  NL+    +     V  +  +K  +    A  +   L+++       +SL E 
Sbjct: 7   IDMDNLKYNLNKIKELVHGTNVLGV--IKANSYGFGAIEIAKELSKFGIEIFGVASLEEA 64

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           M   E    E      +  + EI+        I  +++ Q+   +         I +   
Sbjct: 65  MELREGGIEEEILILGSLFNDEIEIAAEKKFQITVSSMRQIEFLESNKIDAEIHIKIDTG 124

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
                               G K  D   +    V G+  H +  +          K   
Sbjct: 125 MGRLGFT----------PSEGRKAVDYCINRGLKVVGIYSHLSDADGMNDEAYNYTKEQI 174

Query: 184 KEFG--HFITQIEWISLGGGIHFTDKDYPVKDF-CQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +F        I++I +         +   K    +           +            
Sbjct: 175 NKFKIFEEYKTIKYIHILNSGGILRFNDGFKGNLVRAGICMYGMLGNERVPGFKRVFTMK 234

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-------YTAMVC 293
           T  L    L+    I     +            +          +             + 
Sbjct: 235 TRILFIRTLEEDSYISYGRTIKLKKGETFATLAIGYADGMKKEFSNKTYALIEGEKCPIV 294

Query: 294 GRSCLAGDIF-GEFHFEKPVKIG-DRISFED 322
           G  C+   +        K + IG + I   D
Sbjct: 295 GEICMDMCMVKIPESILKKINIGTEAIVIRD 325


>gi|254440988|ref|ZP_05054481.1| Alanine racemase, N-terminal domain family [Octadecabacter
           antarcticus 307]
 gi|198251066|gb|EDY75381.1| Alanine racemase, N-terminal domain family [Octadecabacter
           antarcticus 307]
          Length = 394

 Score = 38.6 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 40/128 (31%), Gaps = 19/128 (14%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TP  ++D   L  N+       K  G++  +  K          +++       + L 
Sbjct: 33  IQTPCLVLDLDALERNIKKMGDYAKAHGMRHRVHGK----------MHKS---VDVAMLQ 79

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E      K GG          + E+ A     D ++ N V+   K    A+       + 
Sbjct: 80  E------KLGGAVGVCCQKVSEAEVFARGGIKDVMVSNQVTAPAKIDRLARMPKLGARVL 133

Query: 122 INPSVSYS 129
                  +
Sbjct: 134 CCVDDPEN 141


>gi|228907821|ref|ZP_04071674.1| Alanine racemase [Bacillus thuringiensis IBL 200]
 gi|228851823|gb|EEM96624.1| Alanine racemase [Bacillus thuringiensis IBL 200]
          Length = 408

 Score = 38.6 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 32/335 (9%), Positives = 86/335 (25%), Gaps = 32/335 (9%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60
           ID   + +N+        +  +K++ A+K       A  +     +              
Sbjct: 30  IDLNAVKHNVKEFKKHVNDEEIKMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVDEA 89

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+             Y       ++              +       + A +L KK+ +
Sbjct: 90  IELREAGITVPILILGYTPVAAVEDVIQYDVMMTVYRVEDLHG---INEIANRLQKKVQI 146

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176
           ++          ++        +    ++    E   V G+   +    E         +
Sbjct: 147 QVKID-----TGMSRIGLQEEEVKPFLEELNRMEYVEVVGIFTHYSTADEIDKSYTNMQT 201

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIYLE 232
           ++ +           QI +I         +     ++  +        +  K      + 
Sbjct: 202 SLFEKAVNTAKELGIQIPYIHSSNSAGSMELSNAFQNMVRVGIGVYGMYPSKEVDHSVVS 261

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287
              A+   +   +      +  +       ++ E  +    +          +       
Sbjct: 262 LQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGYALI 321

Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
                 V GR C+   +  +     PV++GD + F
Sbjct: 322 NGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 355


>gi|228952487|ref|ZP_04114567.1| Alanine racemase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|229069638|ref|ZP_04202925.1| Alanine racemase [Bacillus cereus F65185]
 gi|229150330|ref|ZP_04278548.1| Alanine racemase [Bacillus cereus m1550]
 gi|229178496|ref|ZP_04305862.1| Alanine racemase [Bacillus cereus 172560W]
 gi|228605004|gb|EEK62459.1| Alanine racemase [Bacillus cereus 172560W]
 gi|228633139|gb|EEK89750.1| Alanine racemase [Bacillus cereus m1550]
 gi|228713478|gb|EEL65366.1| Alanine racemase [Bacillus cereus F65185]
 gi|228807182|gb|EEM53721.1| Alanine racemase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
          Length = 408

 Score = 38.6 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 34/335 (10%), Positives = 87/335 (25%), Gaps = 32/335 (9%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60
           ID   + +N+        +  +K++ A+K       A  +     +              
Sbjct: 30  IDLNAVKHNVKEFKKHVNDEEIKMMAAVKANGYGHGAVEVAKAAIEAGIHQLAVAFVDEA 89

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+             Y       ++              +       + A +L KK+ +
Sbjct: 90  IELREAGITVPILILGYTPVAAVEDVIQYDVMMTVYRVEDLHG---INEIANRLQKKVQI 146

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176
           ++      S+  L +            ++    E   V G+   +    E         +
Sbjct: 147 QVKIDTGMSRIGLQEEEVKPF-----LEELNRMEYVEVVGMFTHYSTADEIDKSYTNMQT 201

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIYLE 232
           ++ +           QI +I         +     ++  +        +  K      + 
Sbjct: 202 SLFEKAVNTAKELGIQIPYIHSSNSAGSMELSNTFQNMVRVGIGVYGMYPSKEVDHSVVS 261

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287
              A+   +   +      +  +       ++ E  +    +          +       
Sbjct: 262 LQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGYALI 321

Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
                 V GR C+   +  +     PV++GD + F
Sbjct: 322 NGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 355


>gi|255940316|ref|XP_002560927.1| Pc16g05900 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211585550|emb|CAP93260.1| Pc16g05900 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 415

 Score = 38.6 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 17/55 (30%), Gaps = 2/55 (3%)

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                  PY   V G+ CL GD             G  ++FED     +     F
Sbjct: 286 WRLYKHQPYPYWVKGKVCLLGD--AAHPMMPDQSQGSCMAFEDAGALGLVFHKNF 338


>gi|314985124|gb|EFT29216.1| alanine racemase [Propionibacterium acnes HL005PA1]
 gi|314990744|gb|EFT34835.1| alanine racemase [Propionibacterium acnes HL005PA3]
          Length = 375

 Score = 38.2 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 37/336 (11%), Positives = 85/336 (25%), Gaps = 25/336 (7%)

Query: 3   KTPYY-LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTL-----NQYM 52
            +P + +ID   +  NL       +    K+L A+K  A    A  +   +       ++
Sbjct: 5   PSPSHAIIDLSAIAANLAVVRK--RAGDRKVLFAVKADAYGHGAVEVSRYVEKHRYADWL 62

Query: 53  DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112
              T +   E++                    ++DA +++   +       L      A 
Sbjct: 63  AVATVAEGQELVEAGITLP---ILNLSPADPWDMDAAITSGIRLTVVDFDTLEAVSKAAV 119

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE--IKNVNGLMFHNNCENK 170
           +L     + I       +  L                 +E E    ++         E  
Sbjct: 120 RLGITAKIHIAVDSGMGRIGLRPECLAELTAAADRAKGVEVEGVFTHLPISDVPEGAEFT 179

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY 230
                + M      E       +  ++  G I   D           +    +       
Sbjct: 180 RREIDTFMTAVSLIETHRGPFPLVHLANSGAILGHDLGKTSMVRAGIVGYGYDPNPHADR 239

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA 290
            +   A+   +       + + + I       +S    +    +          +     
Sbjct: 240 ADLHPALSWISHVTFVKTVSVGDTIGYGRTWTASETTKIATVPVGYADGLSRGLSNKGHV 299

Query: 291 -------MVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319
                   + GR C+      +   +  V +GD + 
Sbjct: 300 LIRGSVHPIVGRICMDQ-FMVDLGPDSNVTVGDEVV 334


>gi|254460291|ref|ZP_05073707.1| threonine aldolase [Rhodobacterales bacterium HTCC2083]
 gi|206676880|gb|EDZ41367.1| threonine aldolase [Rhodobacteraceae bacterium HTCC2083]
          Length = 386

 Score = 38.2 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 27/229 (11%), Positives = 61/229 (26%), Gaps = 10/229 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTSSS 59
           I+TP  ++D   L  N+       K+ G++  +  K   +  +           G     
Sbjct: 26  IQTPALVLDLDALERNIKKMGDYAKSHGMRHRVHGKMHKSVDVAKLQESLGGACGVCCQK 85

Query: 60  LYEVMLGHEKFGGETHAYNV----AYKDCEIDAVLSNCDTIIF-NTVSQLNKFKDKAQKL 114
           + E  +       +    N     A  D            +   +  + +      A K 
Sbjct: 86  VSEAEVFARGGIKDVMVSNQVTDLAKIDRLARMPKFGARVLCCVDDPANVADLSAAAVKH 145

Query: 115 HKKIGLRINPSVSY--SKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF 172
             +I   +              +     +++ +  +    + I+   G M H +      
Sbjct: 146 GTQIEALVEIDCGAGRCGVTTTEAVVEIAKMIDAAEGLKFAGIQAYQGAMQHMDSYADRS 205

Query: 173 LCFSAMLKNIEKEFGHFI-TQIEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 +  +E          +E   +GGG   +            L+ 
Sbjct: 206 EKTGVAIGMVEDALAGLKAVGLECDIVGGGGTGSYYFESNSGAFNELQC 254


>gi|207721615|ref|YP_002252054.1| alanine racemase [Ralstonia solanacearum MolK2]
 gi|206586776|emb|CAQ17361.1| ipr001608 alanine racemase, n-terminal protein [Ralstonia
           solanacearum MolK2]
          Length = 376

 Score = 38.2 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 42/179 (23%), Gaps = 11/179 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           + TP  LID  ++  N+          GV+    +K      +          G T S+L
Sbjct: 6   LNTPAALIDVARMTGNIARMQQRLDALGVRFRPHVKTTKCEPVVRAQLDAGAQGITVSTL 65

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCE-----IDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E        G     Y V                     I+ ++V+        A    
Sbjct: 66  KEAEQFFAA-GIRDIVYAVGMAPTRLPQALALRRRGCDLKIVADSVACAQAI--AAFGSA 122

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174
                 +   V            P           +      + G++ H     +    
Sbjct: 123 HGEAFEVWIEVDVDGHRSGIV--PDDDRLISVGRVLAEGGMRLGGVLAHAGSSYEYHAH 179


>gi|170692411|ref|ZP_02883574.1| alanine racemase domain protein [Burkholderia graminis C4D1M]
 gi|170142841|gb|EDT11006.1| alanine racemase domain protein [Burkholderia graminis C4D1M]
          Length = 380

 Score = 38.2 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 46/171 (26%), Gaps = 11/171 (6%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSLY 61
           +TP  ++D +K+  N+          GVK    +K      +    +     G T S+L 
Sbjct: 7   ETPAAIVDVRKMEKNIAAMQERMNALGVKFRPHVKTSKCVEVAQAQIAAGARGITVSTLK 66

Query: 62  EVMLGHEKFGGETHAYNVAYKD-----CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
           E        G     Y V+                    I+ +  S      +  +    
Sbjct: 67  EAE-SFFAAGIVDILYAVSIVPSKLPRVMALRKRGCDLKIVVDNASAALAIVEFCKTAG- 124

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
              L +   V              + L       + +    V G++ H   
Sbjct: 125 -ESLEVWIEVDTDGHRSGLKPEEDALLEIG--RILHAGAIKVGGVLTHAGS 172


>gi|187736490|ref|YP_001878602.1| alanine racemase [Akkermansia muciniphila ATCC BAA-835]
 gi|187426542|gb|ACD05821.1| alanine racemase [Akkermansia muciniphila ATCC BAA-835]
          Length = 368

 Score = 38.2 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 85/302 (28%), Gaps = 23/302 (7%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWG----MFDTLNQYM-DGTTSSSLYEV 63
           ID   + +NL+      K      +  +K  A       +  TL+         +++ E 
Sbjct: 13  IDLGAIRHNLNVVKQAAKGEYYMPV--VKAGAYGHGLEQVCRTLDSEGIAFFGVANVGEA 70

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
               +                E + ++ N      +T+ +   +   A+   K + + ++
Sbjct: 71  RRISQAGCRTRPYILGPAFPEEREEIVLNGWRSFISTMEEAAHYNSLARLYGKTLPIHLS 130

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
                    +        +L E      E +  ++ GL  H  C ++        +   E
Sbjct: 131 VD-----TGMGRGGFLPDQLEELLSRLGELDSLHLEGLGAHLPCADEDREITLRQISRFE 185

Query: 184 KEFGHFITQ--IEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNT 241
           +       +  +++  L       D + P  + C   +     Y       P  A +   
Sbjct: 186 QMAARIREKLPLKYCHLANSAASLDYEIPSNNMC---RPGLVLYGFSPIPSPWAAQLKPA 242

Query: 242 T--TLNTTVLDISENIKNLVIVDSSVEAHVPDY----LLYQESATIYPNTGPYTAMVCGR 295
                  TV+        +    + V  H        + Y +             MV G 
Sbjct: 243 MALFSRLTVVRTLPEGHGISYGGTFVTDHPTRVATVGIGYADGYLRSLAHKGARVMVDGV 302

Query: 296 SC 297
           SC
Sbjct: 303 SC 304


>gi|228939234|ref|ZP_04101827.1| Alanine racemase [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|228972113|ref|ZP_04132729.1| Alanine racemase [Bacillus thuringiensis serovar thuringiensis str.
           T01001]
 gi|228978725|ref|ZP_04139096.1| Alanine racemase [Bacillus thuringiensis Bt407]
 gi|228780986|gb|EEM29193.1| Alanine racemase [Bacillus thuringiensis Bt407]
 gi|228787597|gb|EEM35560.1| Alanine racemase [Bacillus thuringiensis serovar thuringiensis str.
           T01001]
 gi|228820429|gb|EEM66461.1| Alanine racemase [Bacillus thuringiensis serovar berliner ATCC
           10792]
          Length = 408

 Score = 38.2 bits (87), Expect = 1.8,   Method: Composition-based stats.
 Identities = 34/335 (10%), Positives = 87/335 (25%), Gaps = 32/335 (9%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60
           ID   + +N+        +  +K++ A+K       A  +     +              
Sbjct: 30  IDLNAVKHNVKEFKKHVNDEEIKMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVDEA 89

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+             Y       ++              +       + A +L KK+ +
Sbjct: 90  IELREAGITVPILILGYTPVAAVEDVIQYDVMMTVYRVEDLHG---INEIANRLQKKVQI 146

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176
           ++      S+  L +            ++    E   V G+   +    E         +
Sbjct: 147 QVKIDTGMSRIGLQEEEVKPF-----LEELNRMEYIEVVGIFTHYSTADEIDKSYTNMQT 201

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIYLE 232
           ++ +           QI +I         +     ++  +        +  K      + 
Sbjct: 202 SLFEKAVNTAKELGIQIPYIHSSNSAGSMELSNTFQNMVRVGIGVYGMYPSKEVDHSVVS 261

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287
              A+   +   +      +  +       ++ E  +    +          +       
Sbjct: 262 LQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGYALI 321

Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
                 V GR C+   +  +     PV++GD + F
Sbjct: 322 NGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 355


>gi|209546068|ref|YP_002277958.1| alanine racemase [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209538925|gb|ACI58858.1| alanine racemase domain protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 366

 Score = 38.2 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 24/203 (11%), Positives = 46/203 (22%), Gaps = 9/203 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCF--AAWGMFDTLN-QYMDGTTSS 58
           + TP  +ID+ +L  N+          G+     +K     A  +               
Sbjct: 19  LSTPRPVIDEDRLAANIARVQSYMDEHGLNFRPHIKTHKIPALAVAQIAAGAKGINCQKV 78

Query: 59  SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLN-KFKDKAQKLHKK 117
           S  EV      FG     +N+  +         N        V+         A      
Sbjct: 79  SEAEV-FAEAGFGDILITFNIIGQQKLERLARLNEKIPALKVVADSETTIDGLAAHFSGH 137

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSA 177
             L +               +         +    ++   +         + +S     A
Sbjct: 138 KPLTVLVECD--TGGGRCGVQRPEEAASLARRIAAAD--GLTFGGIVTYPKPQSAASVEA 193

Query: 178 MLKNIEKEFGHFITQIEWISLGG 200
            +                +S GG
Sbjct: 194 FITETLDCLKSDGIDCPIVSNGG 216


>gi|330819823|ref|YP_004348685.1| hypothetical protein bgla_2g07000 [Burkholderia gladioli BSR3]
 gi|327371818|gb|AEA63173.1| hypothetical protein bgla_2g07000 [Burkholderia gladioli BSR3]
          Length = 376

 Score = 38.2 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/181 (11%), Positives = 48/181 (26%), Gaps = 11/181 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  LID  ++  N++         GV+    +K      +    L     G T S+L
Sbjct: 6   LPTPSALIDVPRMQRNIERMQQRLDALGVRFRPHVKTTKCEPVVRAQLAAGARGITVSTL 65

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDA-----VLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E      + G +   Y V     ++              ++ +++         A    
Sbjct: 66  KEAEQFFAQ-GIDDIVYAVGMVPGKLPQALALIRRGCDLKLVADSLVSAKAI--AAFGRE 122

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175
           + +   +   +                   +    +      + G++ H           
Sbjct: 123 QGLSFEVWVEIDVDGHRSGLAPADERL--IEVGRALVEGGMKLGGVLAHAGSSYDYHRHE 180

Query: 176 S 176
            
Sbjct: 181 D 181


>gi|218234797|ref|YP_002366787.1| alanine racemase [Bacillus cereus B4264]
 gi|296502685|ref|YP_003664385.1| alanine racemase [Bacillus thuringiensis BMB171]
 gi|218162754|gb|ACK62746.1| alanine racemase [Bacillus cereus B4264]
 gi|296323737|gb|ADH06665.1| alanine racemase [Bacillus thuringiensis BMB171]
          Length = 391

 Score = 38.2 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 34/335 (10%), Positives = 87/335 (25%), Gaps = 32/335 (9%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60
           ID   + +N+        +  +K++ A+K       A  +     +              
Sbjct: 13  IDLNAVKHNVKEFKKHVNDEEIKMMAAVKANGYGHGAVEVAKAAIEAGIHQLAVAFVDEA 72

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+             Y       ++              +       + A +L KK+ +
Sbjct: 73  IELREAGITVPILILGYTPVAAVEDVIQYDVMMTVYRVEDLHG---INEIANRLQKKVQI 129

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176
           ++      S+  L +            ++    E   V G+   +    E         +
Sbjct: 130 QVKIDTGMSRIGLQEEEVKPF-----LEELNRMEYVEVVGIFTHYSTADEIDKSYTNMQT 184

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIYLE 232
           ++ +           QI +I         +     ++  +        +  K      + 
Sbjct: 185 SLFEKAVNTAKELGIQIPYIHSSNSAGSMELSNTFQNMVRVGIGVYGMYPSKEVDHSVVS 244

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287
              A+   +   +      +  +       ++ E  +    +          +       
Sbjct: 245 LQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGYALI 304

Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
                 V GR C+   +  +     PV++GD + F
Sbjct: 305 NGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 338


>gi|227541786|ref|ZP_03971835.1| alanine racemase [Corynebacterium glucuronolyticum ATCC 51866]
 gi|227182492|gb|EEI63464.1| alanine racemase [Corynebacterium glucuronolyticum ATCC 51866]
          Length = 368

 Score = 38.2 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 21/65 (32%), Gaps = 7/65 (10%)

Query: 9  IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWG----MFDTLNQYM-DGTTSSSLYEV 63
          ID   + +N         NA V  +  +K  A       +   L +    G   +++ E 
Sbjct: 8  IDLDAIASNAREVQKAAGNADVMAV--VKANAYNHGVDLVVPVLEKAGIAGFGVATIPEA 65

Query: 64 MLGHE 68
              E
Sbjct: 66 RQVRE 70


>gi|227487051|ref|ZP_03917367.1| alanine racemase [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227093125|gb|EEI28437.1| alanine racemase [Corynebacterium glucuronolyticum ATCC 51867]
          Length = 377

 Score = 38.2 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 21/65 (32%), Gaps = 7/65 (10%)

Query: 9  IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWG----MFDTLNQYM-DGTTSSSLYEV 63
          ID   + +N         NA V  +  +K  A       +   L +    G   +++ E 
Sbjct: 17 IDLDAIASNAREVQKAAGNADVMAV--VKANAYNHGVDLVVPVLEKAGIAGFGVATIPEA 74

Query: 64 MLGHE 68
              E
Sbjct: 75 RQVRE 79


>gi|206972055|ref|ZP_03233003.1| alanine racemase [Bacillus cereus AH1134]
 gi|206732978|gb|EDZ50152.1| alanine racemase [Bacillus cereus AH1134]
          Length = 391

 Score = 38.2 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 34/335 (10%), Positives = 87/335 (25%), Gaps = 32/335 (9%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60
           ID   + +N+        +  +K++ A+K       A  +     +              
Sbjct: 13  IDLNAVKHNVKEFKKHVNDEEIKMMAAVKANGYGHGAVEVAKAAIEAGIHQLAVAFVDEA 72

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+             Y       ++              +       + A +L KK+ +
Sbjct: 73  IELREAGITVPILILGYTPVAAVEDVIQYDVMMTVYRVEDLHG---INEIANRLQKKVQI 129

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176
           ++      S+  L +            ++    E   V G+   +    E         +
Sbjct: 130 QVKIDTGMSRIGLQEEEVKPF-----LEELNRMEYVEVVGIFTHYSTADEIDKSYTNMQT 184

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIYLE 232
           ++ +           QI +I         +     ++  +        +  K      + 
Sbjct: 185 SLFEKAVNTAKELGIQIPYIHSSNSAGSMELSNTFQNMVRVGIGVYGMYPSKEVDHSVVS 244

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287
              A+   +   +      +  +       ++ E  +    +          +       
Sbjct: 245 LQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGYALI 304

Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
                 V GR C+   +  +     PV++GD + F
Sbjct: 305 NGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 338


>gi|325290796|ref|YP_004266977.1| alanine racemase [Syntrophobotulus glycolicus DSM 8271]
 gi|324966197|gb|ADY56976.1| alanine racemase [Syntrophobotulus glycolicus DSM 8271]
          Length = 376

 Score = 38.2 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 37/125 (29%), Gaps = 8/125 (6%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMD-GTTSSSLYE 62
            ID   L  N             +++  +K  A    A  +  TL +        + L E
Sbjct: 10  CIDLGALRRNYRRICR---QTNSEVMAIVKANAYGHGALEIVRTLKEEGVRRFGVAILEE 66

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
            +   EKF   T          + + +++         + Q   F  +A+K      L I
Sbjct: 67  ALQIREKFPEVTVMLIGPTMPDQAERIVAEGIIPEVFRLEQAEAFSLEAEKKGIPAILHI 126

Query: 123 NPSVS 127
                
Sbjct: 127 KVDTG 131


>gi|194014407|ref|ZP_03053024.1| putative alanine racemase [Bacillus pumilus ATCC 7061]
 gi|194013433|gb|EDW22998.1| putative alanine racemase [Bacillus pumilus ATCC 7061]
          Length = 369

 Score = 38.2 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 54/195 (27%), Gaps = 12/195 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           + TP  LIDKQ ++ NL           VKL    K      +     +    G T + +
Sbjct: 7   LDTPALLIDKQVMMENLAAMQQYADRQQVKLRPHTKTHKTPSLAKVQEEMGASGLTVAKV 66

Query: 61  YEVMLGHEK-----FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E  +         F                    S   +   + V  +++ +D  +   
Sbjct: 67  GEAEVMAAHGLTDIFIANQIV-GETKLKRIRKLAESIHISFGIDCVEHVHQIEDVFRGAE 125

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175
           KK  + I   V              S   +  +     E  ++ G+ F ++         
Sbjct: 126 KKAEVLIEIEVGEE----RSGVIEESDFRQILQAIKTCEFVHLKGI-FSHDGHTYKAESK 180

Query: 176 SAMLKNIEKEFGHFI 190
           +      E      +
Sbjct: 181 AHCQTLYEDAVNRTL 195


>gi|261367671|ref|ZP_05980554.1| alanine racemase [Subdoligranulum variabile DSM 15176]
 gi|282570464|gb|EFB75999.1| alanine racemase [Subdoligranulum variabile DSM 15176]
          Length = 395

 Score = 38.2 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 36/342 (10%), Positives = 71/342 (20%), Gaps = 31/342 (9%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDGTTSSS-LYEV 63
           ID   L +N              +   +K  A       +   L +      + S L E 
Sbjct: 14  IDLDALRHNFAFIKRTIGGPVCAV---VKADAYGHGDIVVARVLQEEGAAAFAVSCLAEA 70

Query: 64  MLGHEK---FGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
                           Y    +   +               ++       A  +  K+ L
Sbjct: 71  KRLRRHGITVPVLILGYADPSEASALAQEDIATACFSTE-YAKALSAAAVAAGVQVKVHL 129

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHN-----NCENKSFLCF 175
           +I+  +    F      +   R  E         I  +    F                 
Sbjct: 130 KIDTGMGRIGFAAQSDWQAVVRELEALCSLPGLSICGI-FQHFAVADSLEPDAQTYTDNQ 188

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
             + + +  +          +                D  +                P  
Sbjct: 189 YTLFRKVVDQLQADGYDTGTVHCANSAAQLRHPEWRNDMTRAGIILYGLDPSDELHFPVL 248

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP------------DYLLYQESATIYP 283
             V     + T V D+            + +A +               +L         
Sbjct: 249 KPVMTLKCIVTFVKDLLPGQSVSYGRTFTAKAPMRVATACVGYADGYPRMLSGSQGQGLM 308

Query: 284 NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAG 325
                 A V GR C+      +      V++GD ++      
Sbjct: 309 MVNGRPAPVLGRVCMDQ-TLLDVTNIPGVRMGDEVTVFGPGA 349


>gi|30262102|ref|NP_844479.1| alanine racemase [Bacillus anthracis str. Ames]
 gi|47527372|ref|YP_018721.1| alanine racemase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49184943|ref|YP_028195.1| alanine racemase [Bacillus anthracis str. Sterne]
 gi|165870205|ref|ZP_02214861.1| alanine racemase [Bacillus anthracis str. A0488]
 gi|167633047|ref|ZP_02391373.1| alanine racemase [Bacillus anthracis str. A0442]
 gi|167638340|ref|ZP_02396617.1| alanine racemase [Bacillus anthracis str. A0193]
 gi|170686461|ref|ZP_02877682.1| alanine racemase [Bacillus anthracis str. A0465]
 gi|170706003|ref|ZP_02896465.1| alanine racemase [Bacillus anthracis str. A0389]
 gi|177650850|ref|ZP_02933747.1| alanine racemase [Bacillus anthracis str. A0174]
 gi|190568000|ref|ZP_03020911.1| alanine racemase [Bacillus anthracis Tsiankovskii-I]
 gi|227815101|ref|YP_002815110.1| alanine racemase [Bacillus anthracis str. CDC 684]
 gi|229604370|ref|YP_002866463.1| alanine racemase [Bacillus anthracis str. A0248]
 gi|254684669|ref|ZP_05148529.1| alanine racemase [Bacillus anthracis str. CNEVA-9066]
 gi|254737113|ref|ZP_05194817.1| alanine racemase [Bacillus anthracis str. Western North America
           USA6153]
 gi|254743702|ref|ZP_05201387.1| alanine racemase [Bacillus anthracis str. Kruger B]
 gi|30256728|gb|AAP25965.1| alanine racemase [Bacillus anthracis str. Ames]
 gi|47502520|gb|AAT31196.1| alanine racemase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49178870|gb|AAT54246.1| alanine racemase [Bacillus anthracis str. Sterne]
 gi|164714093|gb|EDR19614.1| alanine racemase [Bacillus anthracis str. A0488]
 gi|167513641|gb|EDR89010.1| alanine racemase [Bacillus anthracis str. A0193]
 gi|167531859|gb|EDR94524.1| alanine racemase [Bacillus anthracis str. A0442]
 gi|170129005|gb|EDS97870.1| alanine racemase [Bacillus anthracis str. A0389]
 gi|170669537|gb|EDT20279.1| alanine racemase [Bacillus anthracis str. A0465]
 gi|172083311|gb|EDT68372.1| alanine racemase [Bacillus anthracis str. A0174]
 gi|190561055|gb|EDV15029.1| alanine racemase [Bacillus anthracis Tsiankovskii-I]
 gi|227006748|gb|ACP16491.1| alanine racemase [Bacillus anthracis str. CDC 684]
 gi|229268778|gb|ACQ50415.1| alanine racemase [Bacillus anthracis str. A0248]
          Length = 391

 Score = 38.2 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 30/337 (8%), Positives = 84/337 (24%), Gaps = 36/337 (10%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM------DGTTSS 58
           +D   + +N+        +  + ++ A+K       A  +     +              
Sbjct: 13  VDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAIAFVD-- 70

Query: 59  SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
              E+             Y         +  +     +       L    + A +L KK 
Sbjct: 71  EAIELREAGINVPILILGYTSV---AAAEEAIQYDVMMTVYRSEDLQGINEIANRLQKKA 127

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLC 174
            +++          ++        +    ++    E   V G+   +    E        
Sbjct: 128 QIQVKID-----TGMSRIGLQEEEVKPFLEELKRMEYVEVVGMFTHYSTADEIDKSYTNM 182

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIY 230
            +++ +            I +I         +     ++  +        +  K      
Sbjct: 183 QTSLFEKAVNTAKELGIHIPYIHSSNSAGSMEPSNTFQNMVRVGIGIYGMYPSKEVNHSV 242

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP--- 287
           +    A+   +   +      +  +       ++ E  +    +          +     
Sbjct: 243 VSLQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGHA 302

Query: 288 ----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
                   V GR C+   +  +     PV++GD + F
Sbjct: 303 LINGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 338


>gi|134292751|ref|YP_001116487.1| alanine racemase domain-containing protein [Burkholderia
           vietnamiensis G4]
 gi|134135908|gb|ABO57022.1| alanine racemase domain protein [Burkholderia vietnamiensis G4]
          Length = 376

 Score = 38.2 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 53/214 (24%), Gaps = 20/214 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           + TP  LID  ++  N+          GV     +K      + D  +     G T S+L
Sbjct: 6   VTTPAALIDVDRMHANIARLHAHLDAFGVAFRPHVKTTKCQQVVDAQIAAGARGITVSTL 65

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCE-----IDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E        G     Y V                     I+ +++         A    
Sbjct: 66  KEAEQFFAS-GVRDIVYAVGMIPARLPQALALRRRGCDLKIVADSLHTAQAI--AAFGRE 122

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSF--- 172
                 +   +           RP   L       + +    + G++ H     +     
Sbjct: 123 HGERFEVWIEIDVDGHR--SGIRPDDDLLIDVGRTLAAGGMTLGGVLAHAGSSYEYDTHD 180

Query: 173 ------LCFSAMLKNIEKEFGHFITQIEWISLGG 200
                     A   +  +         + +S+G 
Sbjct: 181 ALVAIAEQERARTVHAAQRLRAAGLPCDVVSIGS 214


>gi|330960246|gb|EGH60506.1| hypothetical protein PMA4326_16961 [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 367

 Score = 38.2 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 36/130 (27%), Gaps = 7/130 (5%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSLYEVMLG 66
           L+D  ++  N+          GV+L   +K   +  +    +     G T S+L E    
Sbjct: 3   LLDVPRMQRNIRRMQQRMNELGVRLRPHVKTSKSLPVIQAQIAAGATGVTVSTLKEAEHC 62

Query: 67  HEKFGGET---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRI 122
             +   +     A      D       + C   I+ ++V         A          +
Sbjct: 63  FAEGIEDVFYAVAIAPGKLDQAFRLRRNGCRLSILTDSVVAAQAI--VAFGQQHDERFEV 120

Query: 123 NPSVSYSKFI 132
              +      
Sbjct: 121 WIEIDCDGHR 130


>gi|313833423|gb|EFS71137.1| alanine racemase [Propionibacterium acnes HL056PA1]
          Length = 375

 Score = 38.2 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 37/336 (11%), Positives = 86/336 (25%), Gaps = 25/336 (7%)

Query: 3   KTPYY-LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTL-----NQYM 52
            +P + +ID   +  NL       +    K+L A+K  A    A  +   +       ++
Sbjct: 5   PSPSHAIIDLSAIAANLAVVRK--RAGDRKVLFAVKADAYGHGAVEVSRYVEKHRYADWL 62

Query: 53  DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112
              T +   E++                    ++DA +++   +       L      A 
Sbjct: 63  AVATVAEGQELVEAGITLP---ILKLPPADPWDMDAAITSGIRLTVVDFDTLEAVSKAAV 119

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE--IKNVNGLMFHNNCENK 170
           +L     + I       +  L                 +E E    ++         E+ 
Sbjct: 120 RLGITAKIHIAVDSGMGRIGLRPECLAELTAAADRAKGVEVEGVFTHLPISDVPEGAEST 179

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY 230
                + M      E       +  ++  G I   D           +    +       
Sbjct: 180 RREIDTFMTAVSLIETHRGPFPLVHLANSGAILGHDLGKTSMVRAGIVGYGYDPNPHADR 239

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA 290
            +   A+   +       + + + I       +S    +    +          +     
Sbjct: 240 ADLHPALSWISHVTFVKTVSVGDTIGYGRTWTASETTKIATVPVGYADGLSRGLSNKGHV 299

Query: 291 -------MVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319
                   + GR C+      +   +  V +GD + 
Sbjct: 300 LIRGSVHPIVGRICMDQ-FMVDLGPDSNVTVGDEVV 334


>gi|257093754|ref|YP_003167395.1| alanine racemase domain-containing protein [Candidatus
          Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257046278|gb|ACV35466.1| alanine racemase domain protein [Candidatus Accumulibacter
          phosphatis clade IIA str. UW-1]
          Length = 356

 Score = 38.2 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 33/96 (34%), Gaps = 10/96 (10%)

Query: 8  LIDKQKLLNNLDTALYIRKNAGVKLLLALK-CFAAWGMFDTLNQYMDGTTSSSLYE---- 62
          LID  KL +N+     I ++AGV+ +   K C +   + D L           L E    
Sbjct: 4  LIDLAKLDHNVAVIQEICRHAGVQAVWVTKGCHSHPAVVDLLASRGAAV----LGEVYAD 59

Query: 63 -VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTII 97
           +    + F GE              A+      ++
Sbjct: 60 NLRRIRDGFAGELLMIQPPSGHQLDAALACADTLLV 95


>gi|30020200|ref|NP_831831.1| alanine racemase [Bacillus cereus ATCC 14579]
 gi|228962874|ref|ZP_04124117.1| Alanine racemase [Bacillus thuringiensis serovar pakistani str.
           T13001]
 gi|229079274|ref|ZP_04211819.1| Alanine racemase [Bacillus cereus Rock4-2]
 gi|229109560|ref|ZP_04239150.1| Alanine racemase [Bacillus cereus Rock1-15]
 gi|229127502|ref|ZP_04256494.1| Alanine racemase [Bacillus cereus BDRD-Cer4]
 gi|229144707|ref|ZP_04273107.1| Alanine racemase [Bacillus cereus BDRD-ST24]
 gi|29895750|gb|AAP09032.1| Alanine racemase [Bacillus cereus ATCC 14579]
 gi|228638759|gb|EEK95189.1| Alanine racemase [Bacillus cereus BDRD-ST24]
 gi|228655959|gb|EEL11805.1| Alanine racemase [Bacillus cereus BDRD-Cer4]
 gi|228673896|gb|EEL29150.1| Alanine racemase [Bacillus cereus Rock1-15]
 gi|228704024|gb|EEL56465.1| Alanine racemase [Bacillus cereus Rock4-2]
 gi|228796804|gb|EEM44171.1| Alanine racemase [Bacillus thuringiensis serovar pakistani str.
           T13001]
          Length = 408

 Score = 38.2 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 34/335 (10%), Positives = 87/335 (25%), Gaps = 32/335 (9%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60
           ID   + +N+        +  +K++ A+K       A  +     +              
Sbjct: 30  IDLNAVKHNVKEFKKHVNDEEIKMMAAVKANGYGHGAVEVAKAAIEAGIHQLAVAFVDEA 89

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+             Y       ++              +       + A +L KK+ +
Sbjct: 90  IELREAGITVPILILGYTPVAAVEDVIQYDVMMTVYRVEDLHG---INEIANRLQKKVQI 146

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176
           ++      S+  L +            ++    E   V G+   +    E         +
Sbjct: 147 QVKIDTGMSRIGLQEEEVKPF-----LEELNRMEYVEVVGIFTHYSTADEIDKSYTNMQT 201

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIYLE 232
           ++ +           QI +I         +     ++  +        +  K      + 
Sbjct: 202 SLFEKAVNTAKELGIQIPYIHSSNSAGSMELSNTFQNMVRVGIGVYGMYPSKEVDHSVVS 261

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287
              A+   +   +      +  +       ++ E  +    +          +       
Sbjct: 262 LQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGYALI 321

Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
                 V GR C+   +  +     PV++GD + F
Sbjct: 322 NGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 355


>gi|303327206|ref|ZP_07357648.1| putative alanine racemase, N- domain protein [Desulfovibrio sp.
           3_1_syn3]
 gi|302863194|gb|EFL86126.1| putative alanine racemase, N- domain protein [Desulfovibrio sp.
           3_1_syn3]
          Length = 193

 Score = 38.2 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 54/173 (31%), Gaps = 13/173 (7%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT--LNQYMDGTTSSS 59
           + TP  L+D+ +L  N+       +  GV L    K   +  +     ++      T S+
Sbjct: 1   MPTPSLLLDEARLRRNIARLDERLRALGVALRPHCKTCKSMDVARLCMVSPQGP-ITVST 59

Query: 60  LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT-----IIFNTVSQLNKFKDKAQKL 114
           L E      + G     Y V     ++   L+         ++ ++     +    A++ 
Sbjct: 60  LAEAEY-FAEHGVTDICYAVGVTPGKLARALALRQRGVRLSLLLDSAESARQLAAFARER 118

Query: 115 HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
                L +               RP      +    +    +N+ G++ H   
Sbjct: 119 KHIFDLLLEIDCDGH----RSGLRPDDPELTETAALLAGAGQNLLGVLTHAGS 167


>gi|33599435|ref|NP_886995.1| putative metal-activated pyridoxal enzyme [Bordetella
           bronchiseptica RB50]
 gi|33567031|emb|CAE30944.1| putative metal-activated pyridoxal enzyme [Bordetella
           bronchiseptica RB50]
          Length = 381

 Score = 38.2 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 23/172 (13%), Positives = 42/172 (24%), Gaps = 11/172 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM-FDTLNQYMDGTTSSSL 60
           + TP  ++D  ++ +N+          GV L   +K      +    L     G T S+L
Sbjct: 12  LDTPAAIVDVARMQHNIARMQDRMNGLGVSLRPHVKTSKCTPVALAQLAAGARGVTVSTL 71

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCE-----IDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E          +   Y V   +                 II +         D      
Sbjct: 72  KEAEQFFAAGIAD-ILYAVGMAEHRLPAALALRRRGCDLKIITDNAESARTIAD--FGRA 128

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
                 +   +           +P           +      + G+M H   
Sbjct: 129 HDEVFEVWIEIDTDGHR--SGIKPEEAALLAVGAALHEGGMRLGGVMTHAGS 178


>gi|226227945|ref|YP_002762051.1| hypothetical protein GAU_2539 [Gemmatimonas aurantiaca T-27]
 gi|226091136|dbj|BAH39581.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 397

 Score = 38.2 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 28/64 (43%), Gaps = 1/64 (1%)

Query: 2  IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
          ++TP  ++D  +L +NLD         G+KL   +K   +  +     +    G + ++L
Sbjct: 27 LETPVPVVDLDRLAHNLDRMAAYVTLHGLKLRPHVKTHKSPRIAAEQLRLGAVGLSCATL 86

Query: 61 YEVM 64
           E  
Sbjct: 87 REAE 90


>gi|294508466|ref|YP_003572524.1| Alanine racemase [Salinibacter ruber M8]
 gi|294344794|emb|CBH25572.1| Alanine racemase [Salinibacter ruber M8]
          Length = 388

 Score = 38.2 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 31/88 (35%), Gaps = 2/88 (2%)

Query: 2  IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
          + TP  LI++ +L  NL           V L   +K   +  + +   Q    G T +++
Sbjct: 6  LSTPALLIEQARLQANLAAMQATANANDVTLRPHVKTHKSVAIAEQQQQRGATGLTVATV 65

Query: 61 YEVML-GHEKFGGETHAYNVAYKDCEID 87
          +E        F     AY V  +     
Sbjct: 66 HEAEAFVAAGFDDVRVAYPVVGRPKHER 93


>gi|269218932|ref|ZP_06162786.1| alanine racemase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269212043|gb|EEZ78383.1| alanine racemase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 382

 Score = 38.2 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 24/217 (11%), Positives = 55/217 (25%), Gaps = 14/217 (6%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAA----WGMFDTLNQYMDGTTSSSLYEVM 64
           ID   + +NL +       A V  +  +K  A       +   L    D   ++ L E +
Sbjct: 20  IDLSAIRSNLSSVREAAGEAAVLAV--VKADAYGHGRAEVARALAPAADYLGAAQLGEAL 77

Query: 65  LGHEKFGGETHAYNVAYKDCEIDA-VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
              E+ G         +      A  L     +       +++    A++      + + 
Sbjct: 78  ALREEVGPGPRILTWIFAPGAPLAQALRADVELSAGAFWAIDEIARAARETGTTAKVHLK 137

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHN---NCENKSFLCFSAMLK 180
                ++      +   +    +           V            E+ +        +
Sbjct: 138 VDTGMARGGFNLADVAEASRRLRALQADG-LFSVVGLWSHLARADEPESGATERQIERFE 196

Query: 181 NIEKEFGHFITQIEWISL---GGGIHFTDKDYPVKDF 214
                      + E + L   GG +      Y +   
Sbjct: 197 QARAAARSEGIEPEILHLAASGGALWHPAARYDMVRP 233


>gi|196036671|ref|ZP_03104064.1| alanine racemase [Bacillus cereus W]
 gi|195990740|gb|EDX54715.1| alanine racemase [Bacillus cereus W]
          Length = 391

 Score = 38.2 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 30/335 (8%), Positives = 84/335 (25%), Gaps = 32/335 (9%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60
           +D   + +N+        +  + ++ A+K       A  +     +              
Sbjct: 13  VDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVDEA 72

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+             Y         +  +     +       L    + A +L KK  +
Sbjct: 73  IELREAGINVPILILGYTSV---AATEEAIQYDVMMTVYRSEDLQGINEIANRLQKKAQI 129

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176
           ++          ++        +    ++    E   V G+   +    E         +
Sbjct: 130 QVKID-----TGMSRIGLQEEEVKPFLEELKRMEYVEVVGMFTHYSTADEIDKSYTNMQT 184

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIYLE 232
           ++ +            I +I         +     ++  +        +  K      + 
Sbjct: 185 SLFEKAVNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVNHSVVS 244

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287
              A+   +   +      +  +       ++ E  +    +          +       
Sbjct: 245 LQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGHALI 304

Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
                 V GR C+   +  +     PV++GD + F
Sbjct: 305 NGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 338


>gi|119386626|ref|YP_917681.1| alanine racemase domain-containing protein [Paracoccus
           denitrificans PD1222]
 gi|119377221|gb|ABL71985.1| D-3-hydroxyaspartate aldolase [Paracoccus denitrificans PD1222]
          Length = 387

 Score = 38.2 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 40/134 (29%), Gaps = 7/134 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTSSS 59
           I+TP  ++D   L  N+       K  G++     K   +  +           G     
Sbjct: 27  IQTPCLILDLDALERNIRKMGDYAKAHGMRHRSHGKMHKSVDVQKLQESLGGSVGVCCQK 86

Query: 60  LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNC-----DTIIFNTVSQLNKFKDKAQKL 114
           + E          +    N   +  +ID +          T+  + V  +      AQK 
Sbjct: 87  VSEAEAFARGGIKDVLVTNEVREPAKIDRLARLPKTGATVTVCVDDVQNIADLSAAAQKH 146

Query: 115 HKKIGLRINPSVSY 128
             ++G+ +      
Sbjct: 147 GTELGIFVEIDCGA 160


>gi|326692928|ref|ZP_08229933.1| alanine racemase [Leuconostoc argentinum KCTC 3773]
          Length = 370

 Score = 38.2 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 26/212 (12%), Positives = 56/212 (26%), Gaps = 11/212 (5%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAA-WGMFDT----LNQYMDGTTSSSLYEV 63
           I ++ L NN+            K+ LA+K  A   G+  T    +   + G   + + E 
Sbjct: 13  ISQKALKNNVAVVKQTSGAD--KIFLAVKSNAYGLGLIPTSKAAIAGGVYGLAVAIIDEA 70

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +    +                 + +       +  +   L+  K+ A  L  +  L ++
Sbjct: 71  LALRHERLTAPILILGISPAQYAELMAVQHIMAMVVS---LDWLKEAATYLSGEQRLHVS 127

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
             V      +   +R                   V         ++ +   F   L    
Sbjct: 128 LGVDTGMGRIGFRDRAALAEAIAYVQAHHDLFDYVGLATHFAESDSANTDYFEMQLARW- 186

Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFC 215
            E    + + E+  +            V    
Sbjct: 187 HELTDGLPEPEYYHVANSGAAMYHADEVPHDV 218


>gi|254751429|ref|ZP_05203466.1| alanine racemase [Bacillus anthracis str. Vollum]
 gi|254758301|ref|ZP_05210328.1| alanine racemase [Bacillus anthracis str. Australia 94]
          Length = 408

 Score = 38.2 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 30/337 (8%), Positives = 84/337 (24%), Gaps = 36/337 (10%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM------DGTTSS 58
           +D   + +N+        +  + ++ A+K       A  +     +              
Sbjct: 30  VDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAIAFVD-- 87

Query: 59  SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
              E+             Y         +  +     +       L    + A +L KK 
Sbjct: 88  EAIELREAGINVPILILGYTSV---AAAEEAIQYDVMMTVYRSEDLQGINEIANRLQKKA 144

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLC 174
            +++          ++        +    ++    E   V G+   +    E        
Sbjct: 145 QIQVKID-----TGMSRIGLQEEEVKPFLEELKRMEYVEVVGMFTHYSTADEIDKSYTNM 199

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIY 230
            +++ +            I +I         +     ++  +        +  K      
Sbjct: 200 QTSLFEKAVNTAKELGIHIPYIHSSNSAGSMEPSNTFQNMVRVGIGIYGMYPSKEVNHSV 259

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP--- 287
           +    A+   +   +      +  +       ++ E  +    +          +     
Sbjct: 260 VSLQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGHA 319

Query: 288 ----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
                   V GR C+   +  +     PV++GD + F
Sbjct: 320 LINGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 355


>gi|23495371|dbj|BAC20179.1| D-b-hydroxy-aspartate aldolase [Paracoccus denitrificans]
          Length = 387

 Score = 38.2 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 40/134 (29%), Gaps = 7/134 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTSSS 59
           I+TP  ++D   L  N+       K  G++     K   +  +           G     
Sbjct: 27  IQTPCLILDLDALERNIRKMGDYAKAHGMRHRSHGKMHKSVDVQKLQESLGGSVGVCCQK 86

Query: 60  LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNC-----DTIIFNTVSQLNKFKDKAQKL 114
           + E          +    N   +  +ID +          T+  + V  +      AQK 
Sbjct: 87  VSEAEAFARGGIKDVLVTNEVREPAKIDRLARLPKTGATVTVCVDDVQNIADLSAAAQKH 146

Query: 115 HKKIGLRINPSVSY 128
             ++G+ +      
Sbjct: 147 GTELGIFVEIDCGA 160


>gi|259047269|ref|ZP_05737670.1| alanine racemase [Granulicatella adiacens ATCC 49175]
 gi|259036045|gb|EEW37300.1| alanine racemase [Granulicatella adiacens ATCC 49175]
          Length = 371

 Score = 37.8 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/73 (13%), Positives = 23/73 (31%), Gaps = 8/73 (10%)

Query: 8  LIDKQKLLNNLDTALYIRKNAGVKLLLA-LKCFA----AWGMFDTLNQYMD-GTTSSSLY 61
          ++D   +  N+         +  K + A +K  A       +     +    G   +++ 
Sbjct: 12 VVDLSIIKQNISKLKSKLNPS--KQVYAVVKANAYGHGMIPVAKAALEAGVQGFCVANVD 69

Query: 62 EVMLGHEKFGGET 74
          E +   E    E 
Sbjct: 70 EALALREAGIMEP 82


>gi|227544692|ref|ZP_03974741.1| alanine racemase [Lactobacillus reuteri CF48-3A]
 gi|300909066|ref|ZP_07126529.1| alanine racemase [Lactobacillus reuteri SD2112]
 gi|227185338|gb|EEI65409.1| alanine racemase [Lactobacillus reuteri CF48-3A]
 gi|300894473|gb|EFK87831.1| alanine racemase [Lactobacillus reuteri SD2112]
          Length = 375

 Score = 37.8 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 22/192 (11%), Positives = 60/192 (31%), Gaps = 11/192 (5%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDT-LNQYMDGTTSSSLYE 62
           ++D   L +N+     +      ++L  +K  A       +  T +     G   + L E
Sbjct: 12  IVDLDALRHNIQEQRKVLPE-NSRILAVVKANAYGNGLIPVAQTAMTSGASGLCVAILDE 70

Query: 63  VM-LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
            + L        T    +   +  + A  +   ++   ++  L ++   AQ    K  L+
Sbjct: 71  ALELWDNGIEAMTLVLGITPVEDALIAAQAG-VSLTVGSLDWLEQYHQLAQVAKPKKPLK 129

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           ++  +      +        +   +    ++S      G+  H    +     +      
Sbjct: 130 VHLGIDSGMGRIGFTEVATFK---QAVKLLDSPEFEFEGMFTHFATADSPDENYFNQQVQ 186

Query: 182 IEKEFGHFITQI 193
              +F   + ++
Sbjct: 187 RWHQFVASLDEL 198


>gi|261855604|ref|YP_003262887.1| alanine racemase [Halothiobacillus neapolitanus c2]
 gi|261836073|gb|ACX95840.1| alanine racemase [Halothiobacillus neapolitanus c2]
          Length = 378

 Score = 37.8 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 9/65 (13%)

Query: 9  IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDGTTSSSLYE-- 62
          ID   L +N   A  + K  G KLL A+K  A       +   L   +DG   ++L E  
Sbjct: 25 IDLAALRHNAAVARQVAK--GRKLLAAVKADAYGHGMATVARALRDRVDGFMVATLGEGE 82

Query: 63 -VMLG 66
           + L 
Sbjct: 83 ALRLA 87


>gi|228920796|ref|ZP_04084136.1| Alanine racemase [Bacillus thuringiensis serovar huazhongensis BGSC
           4BD1]
 gi|229190195|ref|ZP_04317198.1| Alanine racemase [Bacillus cereus ATCC 10876]
 gi|228593312|gb|EEK51128.1| Alanine racemase [Bacillus cereus ATCC 10876]
 gi|228838907|gb|EEM84208.1| Alanine racemase [Bacillus thuringiensis serovar huazhongensis BGSC
           4BD1]
          Length = 408

 Score = 37.8 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 34/335 (10%), Positives = 87/335 (25%), Gaps = 32/335 (9%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60
           ID   + +N+        +  +K++ A+K       A  +     +              
Sbjct: 30  IDLNAVKHNVKEFKKHVNDEEIKMMAAVKANGYGHGAVEVAKAAIEAGIHQLAVAFVDEA 89

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+             Y       ++              +       + A +L KK+ +
Sbjct: 90  IELREAGITVPILILGYTPVAAVEDVIQYDVMMTVYRVEDLHG---INEIANRLQKKVQI 146

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176
           ++      S+  L +            ++    E   V G+   +    E         +
Sbjct: 147 QVKIDTGMSRIGLQEEEVKPF-----LEELNRMEYVEVVGIFTHYSTADEIDKSYTNMQT 201

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIYLE 232
           ++ +           QI +I         +     ++  +        +  K      + 
Sbjct: 202 SLFEKAVNTAKELGIQIPYIHSSNSAGSMELSNTFQNMVRVGIGVYGMYPSKEVDHSVVS 261

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287
              A+   +   +      +  +       ++ E  +    +          +       
Sbjct: 262 LQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGYALI 321

Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
                 V GR C+   +  +     PV++GD + F
Sbjct: 322 NGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 355


>gi|255018554|ref|ZP_05290680.1| hypothetical protein LmonF_14096 [Listeria monocytogenes FSL
          F2-515]
          Length = 54

 Score = 37.8 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 4/23 (17%), Positives = 7/23 (30%)

Query: 3  KTPYYLIDKQKLLNNLDTALYIR 25
           TP Y+ D   + +         
Sbjct: 32 GTPLYVYDVALIRDRARGFKKTF 54


>gi|42526605|ref|NP_971703.1| alanine racemase [Treponema denticola ATCC 35405]
 gi|81831436|sp|Q73NQ7|ALR_TREDE RecName: Full=Alanine racemase
 gi|41816798|gb|AAS11584.1| alanine racemase [Treponema denticola ATCC 35405]
          Length = 379

 Score = 37.8 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 24/201 (11%), Positives = 60/201 (29%), Gaps = 13/201 (6%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA--AWGM---FDTLNQYMDGTTSSSLYE 62
           +I    L  N+           VK+ L +K  A     +      +   +     +S+ E
Sbjct: 7   IIHLDNLQYNIKEIKKRLNK-NVKICLPVKADAYGHGAVRVAVAAIRAGVSYLAVASIQE 65

Query: 63  V-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
              L          + ++   +   + +  + + ++ +     +     A+KL+KK  + 
Sbjct: 66  AVELREAGIVAPIISLSLPVLEEIPELLKYDIEPLVIDEEFIND-LNRFAKKLNKKAWVH 124

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKN 181
           +          +           +       +E   + G+  H    + +        K 
Sbjct: 125 LKID-----TGMRRIGCSPMEAVKLAVQIDRAENLELKGVCTHFAVSDSTDEKNIKFTKK 179

Query: 182 IEKEFGHFITQIEWISLGGGI 202
               F   I +I+   +  G+
Sbjct: 180 QISVFKDSIKEIKKAGINPGL 200


>gi|327457519|gb|EGF04174.1| alanine racemase [Propionibacterium acnes HL092PA1]
          Length = 375

 Score = 37.8 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 38/336 (11%), Positives = 89/336 (26%), Gaps = 25/336 (7%)

Query: 3   KTPYY-LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTL-----NQYM 52
            +P + +ID + +  NL       +    K+L A+K  A    A  +   +       ++
Sbjct: 5   PSPSHAIIDLRAIAANLAVVRK--RAGDRKVLFAVKADAYGHGAVEVSRYVEKHRYADWL 62

Query: 53  DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112
              T +   E  L            + A       A+ S     + +    L      A 
Sbjct: 63  AVATVAEGQE--LVEAGITLPILKLSPADPWDMDAAITSGMRLTVVD-FDTLEAVSKAAV 119

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE--IKNVNGLMFHNNCENK 170
           +L     + I       +  L   +           +++E E    ++         E+ 
Sbjct: 120 RLGITARIHIAVDSGMGRIGLRPEHLAQLTAAADRTERVEVEGVFTHLPMSDVPEGEEST 179

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY 230
                + M    + +       +  ++  G I   D           +    +       
Sbjct: 180 RHEIDAFMTAVTQTQTDRGPFPLVHLANSGAILGHDLGKTSMVRAGIVGYGYDPDPHANR 239

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA 290
            +   A+   +       ++  + I       +S    +    +          +     
Sbjct: 240 ADLHPALSWISHVTFVKTINPGDAIGYGRTWTASETTKIATVPVGYADGLSRGLSNKGHV 299

Query: 291 -------MVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319
                   + GR C+      +   +  V +GD + 
Sbjct: 300 LIGGSVHPIVGRICMDQ-FMVDLGPDSSVTVGDEVV 334


>gi|182414552|ref|YP_001819618.1| alanine racemase [Opitutus terrae PB90-1]
 gi|177841766|gb|ACB76018.1| alanine racemase [Opitutus terrae PB90-1]
          Length = 382

 Score = 37.8 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 23/273 (8%), Positives = 66/273 (24%), Gaps = 13/273 (4%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-----DTLNQYMDGTTSSSLYEV 63
           ID   L  NL             + + +K  A            ++   D    ++L E 
Sbjct: 16  IDLAALERNLRLIRASLPAHMRYVAV-VKADAYGHGLPQTAARLMHAGADLFAVATLAEA 74

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
               E   G            E   +     T   +++ ++++F+   +   + I + + 
Sbjct: 75  ATVRELGPGWPVLLLSPLLPEEDRYLAEYDLTATVSSIEEVDRFEAAGRVAGRVISVHLK 134

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
                 +  +              +    +    + G+  H     ++        + + 
Sbjct: 135 IDTGMGRLGVWHEQTASV-----YEHLARAPHLRLAGVFTHFAAPEEAAFTSEQRRRFLA 189

Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP--GEAIVTNT 241
                    ++ I +        +          ++    ++ +  +      E      
Sbjct: 190 ALAACQGIPLDSIFVHADNSAGIETMSSATPFNAVRIGLLQFGILPHPNSLLSEVHTEPV 249

Query: 242 TTLNTTVLDISENIKNLVIVDSSVEAHVPDYLL 274
            +  T V  +        I             +
Sbjct: 250 FSFLTRVGLVKSLPAGYTISYGRTYTLGRPTRI 282


>gi|315099423|gb|EFT71399.1| alanine racemase [Propionibacterium acnes HL059PA2]
          Length = 375

 Score = 37.8 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 37/336 (11%), Positives = 86/336 (25%), Gaps = 25/336 (7%)

Query: 3   KTPYY-LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTL-----NQYM 52
            +P + +ID   +  NL       +    K+L A+K  A    A  +   +       ++
Sbjct: 5   PSPSHAIIDLSAIAANLAVVRK--RAGDRKVLFAVKADAYGHGAVEVSRYVEKHRYADWL 62

Query: 53  DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112
              T +   E++                    ++DA +++   +       L      A 
Sbjct: 63  AVATVAEGQELVEAGITLP---ILKLSPADPWDMDAAITSGIRLTVVDFDTLEAVSKAAV 119

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE--IKNVNGLMFHNNCENK 170
           +L     + I       +  L                 +E E    ++         E+ 
Sbjct: 120 RLGITAKIHIAVDSGMGRIGLRPECLAELTAAADRAKGVEVEGVFTHLPISDVPEGAEST 179

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY 230
                + M      E       +  ++  G I   D           +    +       
Sbjct: 180 RREIDTFMTAVSLIETHRGPFPLVHLANSGAILGHDLGKTSMVRAGIVGYGYDPNPHADR 239

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA 290
            +   A+   +       + + + I       +S    +    +          +     
Sbjct: 240 ADLHPALSWISHVTFVKTVSVGDTIGYGRTWTASETTKIATVPVGYADGLSRGLSNKGHV 299

Query: 291 -------MVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319
                   + GR C+      +   +  V +GD + 
Sbjct: 300 LIRGSVHPIVGRICMDQ-FMVDLGPDSNVTVGDEVV 334


>gi|121592921|ref|YP_984817.1| alanine racemase domain-containing protein [Acidovorax sp. JS42]
 gi|120605001|gb|ABM40741.1| alanine racemase domain protein [Acidovorax sp. JS42]
          Length = 393

 Score = 37.8 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 9/69 (13%), Positives = 19/69 (27%), Gaps = 3/69 (4%)

Query: 1  MIKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGM---FDTLNQYMDGTTS 57
          +I TP  ++D   +  N+           V+     K   +  +    +           
Sbjct: 22 LIDTPALVVDLDAMERNIQRMAEFAHKHQVRWRPHAKMHKSAEIALQLEWSGARGHCVQK 81

Query: 58 SSLYEVMLG 66
           S  E +  
Sbjct: 82 VSEAEALAA 90


>gi|300703088|ref|YP_003744690.1| hypothetical protein RCFBP_10743 [Ralstonia solanacearum CFBP2957]
 gi|299070751|emb|CBJ42046.1| conserved protein of unknown function, Alanine racemase domain
           protein [Ralstonia solanacearum CFBP2957]
          Length = 376

 Score = 37.8 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 42/179 (23%), Gaps = 11/179 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           + TP  LID  ++  N+          GV+    +K      +          G T S+L
Sbjct: 6   LNTPAALIDVARMTGNIARMQQRLDALGVRFRPHVKTTKCEPVVRAQLDAGAQGITVSTL 65

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCE-----IDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E        G     Y V                     I+ ++V+        A    
Sbjct: 66  KEAEQFFAA-GLRDIVYAVGMAPTRLPQALALRRRGCDLKIVADSVACAQAI--AAFGNT 122

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLC 174
                 +   V            P           +      + G++ H     +    
Sbjct: 123 HGEAFEVWIEVDVDGHRSGIV--PDDDRLIAVGRVLAEGGMRLGGVLAHAGSSYEYHAH 179


>gi|296875898|ref|ZP_06899959.1| alanine racemase [Streptococcus parasanguinis ATCC 15912]
 gi|296433139|gb|EFH18925.1| alanine racemase [Streptococcus parasanguinis ATCC 15912]
          Length = 370

 Score = 37.8 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 22/184 (11%), Positives = 51/184 (27%), Gaps = 11/184 (5%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFAA----WGMFDTLNQYMDGTTSSSLYEV 63
           +D   +  N+        +  +K   A+ K  A       +   L   +DG   S++ E 
Sbjct: 13  VDLDAIAFNVQQVSEHIPSQALK--YAVVKANAYGHGVVAVTQKLAPQVDGFCVSNMDEA 70

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +   E+                ++    +   +   +   L        +     GL+++
Sbjct: 71  LEIREEGLQHPILILGVVPSETVNLAKEHDIRLTVAS---LAWLDQLLGEEADLSGLKVH 127

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
             V      +        ++ E+      +EI+ +    F    E       +      E
Sbjct: 128 IKVDSGMGRIGFRTIEDIKVAERLLLAAGAEIEGI-FTHFATADEADDRKFQAQYHFFKE 186

Query: 184 KEFG 187
               
Sbjct: 187 VLAA 190


>gi|241864906|gb|ACS68536.1| low-specificity threonine aldolase [uncultured bacterium FLS18]
          Length = 407

 Score = 37.8 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 23/211 (10%), Positives = 63/211 (29%), Gaps = 13/211 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           + TP  LID  ++  NL       +   V L    K      +          G  ++ +
Sbjct: 48  LSTPALLIDLDRMDGNLRKMADHARGKNVGLRPHTKTHKCPIIAKMQIDLGAVGVCAAKV 107

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT-----IIFNTVSQLNKFKDKAQKLH 115
            E  +      G     +      +I  V++         ++ +    ++ F + A+   
Sbjct: 108 SEAEVMAAGGVGNVLITSPVVTSEKISRVVALAKKSSGIQMVVDNAKTIDDFNEAAKAAG 167

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175
            ++ + ++      +  +    +P   L ++       +   +     H           
Sbjct: 168 IELRVILDLDTGTKRTGI-AVGKPALALAQQIDKCDALQFDGLQVYAGHLMHITGHAQRK 226

Query: 176 SAMLK------NIEKEFGHFITQIEWISLGG 200
           S  +       + ++       ++  ++ GG
Sbjct: 227 SRSVATFGEAIDTKEMIEQAGIEVNVLTGGG 257


>gi|228945715|ref|ZP_04108062.1| Alanine racemase [Bacillus thuringiensis serovar monterrey BGSC
           4AJ1]
 gi|228813936|gb|EEM60210.1| Alanine racemase [Bacillus thuringiensis serovar monterrey BGSC
           4AJ1]
          Length = 408

 Score = 37.8 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 30/335 (8%), Positives = 84/335 (25%), Gaps = 32/335 (9%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60
           +D   + +N+        +  + ++ A+K       A  +     +              
Sbjct: 30  VDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVDEA 89

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+             Y         +  +     +       L    + A +L KK  +
Sbjct: 90  IELREAGINVPILILGYTSV---AATEEAIQYDVMMTVYRSEDLQGINEIANRLQKKAQI 146

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176
           ++          ++        +    ++    E   V G+   +    E         +
Sbjct: 147 QVKID-----TGMSRIGLQEEEVKPFLEELKRMEYVEVVGMFTHYSTADEIDKSYTNMQT 201

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIYLE 232
           ++ +            I +I         +     ++  +        +  K      + 
Sbjct: 202 SLFEKAVNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVNHSVVS 261

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287
              A+   +   +      +  +       ++ E  +    +          +       
Sbjct: 262 LQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGHALI 321

Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
                 V GR C+   +  +     PV++GD + F
Sbjct: 322 NGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 355


>gi|83590990|ref|YP_430999.1| alanine racemase [Moorella thermoacetica ATCC 39073]
 gi|83573904|gb|ABC20456.1| alanine racemase [Moorella thermoacetica ATCC 39073]
          Length = 373

 Score = 37.8 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 38/333 (11%), Positives = 82/333 (24%), Gaps = 27/333 (8%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWG----MFDT-LNQYMDGTTSSSLYEV 63
           ID + +  N+     I      +++  +K  A       +  T L   +     ++L E 
Sbjct: 9   IDLEAVARNVRAIKKILA-PQTEIMAIVKANAYGHGAGPVARTALANGVSWLGVATLGEA 67

Query: 64  M-LGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
           + L  E              +     V ++    +F+           A         R+
Sbjct: 68  LDLRREGITAPLLILGYTPPEDAGRVVEADISQTVFSVDQAR---ALNAAAAAVGTRARL 124

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCEN--KSFLCFSAMLK 180
           +  +      L    R          D     ++ +    F  +             + +
Sbjct: 125 HLKIDTGMGRLGFLPREAVTAARAIADLPHVTLEGI-FTHFAASDAADKTYTQRQLGLFQ 183

Query: 181 NIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +  E         W          D      +  +        +     ++     +T 
Sbjct: 184 QVIAELEKQGITFPWRHAANSGAIIDLPGTHFNLVRA-GIILYGHYPSPEVQRKRLALTP 242

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAH-------VPDYLLYQESATIYPNTGPY----- 288
             TL T V+ + E      I                         + +  N         
Sbjct: 243 VMTLKTRVVLVKEVPAGSYISYGCTYRTPGPARIATLPVGYADGYSRLLSNRAEVLVRGR 302

Query: 289 TAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321
            A + GR C+   +  +      V++GD +   
Sbjct: 303 RAPIVGRICMDQCMI-DVTAIPEVRVGDEVVLF 334


>gi|218903226|ref|YP_002451060.1| alanine racemase [Bacillus cereus AH820]
 gi|218535647|gb|ACK88045.1| alanine racemase [Bacillus cereus AH820]
          Length = 391

 Score = 37.8 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 32/335 (9%), Positives = 85/335 (25%), Gaps = 32/335 (9%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60
           +D   + +N+        +  + ++ A+K       A  +     +              
Sbjct: 13  VDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVDEA 72

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+             Y         +  +     +       L    + A +L KK  +
Sbjct: 73  IELREAGINVPILILGYTSV---AATEEAIQYGVMMTVYRSEDLQGINEIANRLQKKAQI 129

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176
           ++      S+  L +            ++    E   V G+   +    E         +
Sbjct: 130 QVKIDTGMSRIGLQEEEVKPF-----LEELKRMEYVEVVGMFTHYSTADEIDKSYTNMQT 184

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIYLE 232
           ++ +            I +I         +     ++  +        +  K      + 
Sbjct: 185 SLFEKAVNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVNHSVVS 244

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287
              A+   +   +      +  +       ++ E  +    +          +       
Sbjct: 245 LQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGHALI 304

Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
                 V GR C+   +  +     PV++GD + F
Sbjct: 305 NGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 338


>gi|5669790|gb|AAD46475.1|AF108014_1 YPLW6 [Hordeum vulgare]
          Length = 247

 Score = 37.8 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 54/205 (26%), Gaps = 23/205 (11%)

Query: 43  GMFDTLNQYMDGTTSSSLYEVMLGHEKFGGE---THAYNVAYKDCEIDAVLSNCDTIIFN 99
            +   L    DG   SS   ++ G    G      H YN    D +  A ++     +  
Sbjct: 20  ELIRWLADGGDGVEQSSRVTLVWGMPGVGKTTXVDHVYNTVKLDFDAAAWVT-----VSE 74

Query: 100 TVSQLNKFKDKAQKLHKKIGLRINPSVSYSK------FILADPNRPFSRLGEKCKDKIES 153
           +    +  K  A     + G+ ++ + +  +             +    L +   +++  
Sbjct: 75  SYCIXDPLKKIA----AQFGIAVDVTNNEMRGLAKSIHNYLQGKKYIMVLDDVWAERLWP 130

Query: 154 EIKNV----NGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY 209
           EI+NV    N          K  +  +                   +   G    TD+  
Sbjct: 131 EIRNVFSTSNCTSRVVMTSRKQTVWATREFAYRIHWEPRQAHHPWVLFGKGAFGTTDEKK 190

Query: 210 PVKDFCQRLKEFSEKYSVQIYLEPG 234
                 Q L            +   
Sbjct: 191 -CPWDRQELAWKFIAKCQGWPMATA 214


>gi|145298692|ref|YP_001141533.1| alanine racemase [Aeromonas salmonicida subsp. salmonicida A449]
 gi|142851464|gb|ABO89785.1| alanine racemase [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 408

 Score = 37.8 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 45/332 (13%), Positives = 85/332 (25%), Gaps = 26/332 (7%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTL-----NQYMDGTTSSSLYEV 63
           +D      NL T      + G ++   +K  A     D L        +     +S  E 
Sbjct: 46  VDLTAFEQNLQTLKTRLGDKGPQICAIMKADAYGHGIDLLVPSVVKANIPCIGIASNEEA 105

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
            +  EK          A    E++  L      +  ++       D A + H  I + + 
Sbjct: 106 RVAREKGFSGRLMRVRAATPIEVEQALPYKLEELVGSLVSAQGISDIALRHHTTIPVHV- 164

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEI-KNVNGLMFHNNCENKSFLCF------- 175
                        N    RL +  +D +     K +  +    +   +            
Sbjct: 165 ----ALNSAGMSRNGIDLRLADAKQDALAMLKLKGITPVGIMTHFPVEEKEDVKLGLAQF 220

Query: 176 --SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLK----EFSEKYSVQI 229
              +       +       I   +    +   D  + +      L         +Y   +
Sbjct: 221 KLDSQWLLEAGKLDRSKITIHAANSFATLAVPDAYFDMVRPGGLLYGDSIPSYTEYKRVM 280

Query: 230 YLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT 289
             +   A V N      TV              +++     D      S   Y       
Sbjct: 281 AFKTQVASV-NHYAAGNTVGYDRTFTLKRDSWLANLPLGYSDGYRRALSNKAYVLIQGQK 339

Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDRISFE 321
             V G++ +   I  +    K VK GD +   
Sbjct: 340 VPVVGKTSMNT-IMVDVTDLKGVKPGDEVVLF 370


>gi|302141705|emb|CBI18908.3| unnamed protein product [Vitis vinifera]
          Length = 230

 Score = 37.8 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 22/48 (45%), Gaps = 7/48 (14%)

Query: 5  PYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM 52
          P+Y++D   +++ ++          V+   A+K      +FDT ++  
Sbjct: 47 PFYVLDLGVVVSLMEKWSRALPL--VRPFYAVKA-----VFDTASRLG 87


>gi|159185965|ref|NP_356693.2| hypothetical protein Atu3948 [Agrobacterium tumefaciens str. C58]
 gi|159141099|gb|AAK89478.2| conserved hypothetical protein [Agrobacterium tumefaciens str.
          C58]
          Length = 381

 Score = 37.8 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 29/84 (34%), Gaps = 2/84 (2%)

Query: 2  IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSL 60
          I TP  ++D+ ++L N+        +  V +   LK   +      +    +G  T S+L
Sbjct: 10 ISTPSLIVDEARMLRNISRLQRHLDSLNVSIRPHLKTVKSVDAAKRILSSGNGPATVSTL 69

Query: 61 YEVMLGHEKFGGETHAYNVAYKDC 84
           E        G     Y V     
Sbjct: 70 KEAE-VFASAGVRDILYAVGIGPQ 92


>gi|297538234|ref|YP_003674003.1| alanine racemase [Methylotenera sp. 301]
 gi|297257581|gb|ADI29426.1| alanine racemase [Methylotenera sp. 301]
          Length = 358

 Score = 37.8 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 22/208 (10%), Positives = 52/208 (25%), Gaps = 12/208 (5%)

Query: 11  KQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDGTTSSSLYEVMLG 66
                +N   A        + +   +K  A    A      +    DG   + L E +  
Sbjct: 11  LDAFRHNYRVAKQAHAGKALAV---IKANAYGHGAVHCAKAIEGEADGFAVACLEEALQL 67

Query: 67  HEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSV 126
            E    E       + +      +   D  I        +    A+       L +   +
Sbjct: 68  REAGIPEPILLLEGFFEAIELPEIVANDLWIVVHAQWQVEILFAAKLAKP---LHVWLKM 124

Query: 127 SYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF 186
                 +  P   + +  E+ K+     +  +  +    N +N S       ++  +   
Sbjct: 125 DSGMHRVGLPPDEYVQAYERLKN--HKNVGKIVLMTHFANADNVSSNHTLQQIETFQNTT 182

Query: 187 GHFITQIEWISLGGGIHFTDKDYPVKDF 214
                +I   +    + +          
Sbjct: 183 QGLSAEISLANSAAILGWKQAKCDWTRP 210


>gi|302406558|ref|XP_003001115.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
 gi|261360373|gb|EEY22801.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
          Length = 392

 Score = 37.8 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 23/173 (13%), Positives = 48/173 (27%), Gaps = 14/173 (8%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG--TTSSS 59
           + TP  +I K+ +  N+          GV     +K      +   + ++       +S+
Sbjct: 19  LPTPALVISKRIVERNIAQLNRDVDAVGVAFRPHVKTLKCLEITRMMLRHGKNRKIIAST 78

Query: 60  LYEVM----LGHEKFGGETHA---YNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112
           + E+     L  E    E         +               ++ +   Q+   +  A 
Sbjct: 79  IPEIEGALPLVKEGLLDEAIYGLPIAPSKLPRLAALRDQIRIVLLLDHDDQVTHLESFAA 138

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHN 165
                + ++I+          A       RL         S   N+ G   H 
Sbjct: 139 SSPWDVLIKIDV-----GTRRAGIPASSPRLAALVARVESSSAANLLGFYAHA 186


>gi|300857879|ref|YP_003782862.1| hypothetical protein cpfrc_00462 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300685333|gb|ADK28255.1| putative membrane protein [Corynebacterium pseudotuberculosis
           FRC41]
 gi|302205606|gb|ADL09948.1| major facilitator superfamily permease [Corynebacterium
           pseudotuberculosis C231]
 gi|302330159|gb|ADL20353.1| major facilitator superfamily permease [Corynebacterium
           pseudotuberculosis 1002]
 gi|308275842|gb|ADO25741.1| major facilitator superfamily permease [Corynebacterium
           pseudotuberculosis I19]
          Length = 409

 Score = 37.8 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 19/206 (9%), Positives = 45/206 (21%), Gaps = 8/206 (3%)

Query: 15  LNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQY--MDGTTSSSLYEVMLGHEKFGG 72
              L    +           A   F+   +   +         + +SL    +  E   G
Sbjct: 87  RRLLLILTFAFVAGNALTFFAS-SFSVLIVARVIAGLPQGAFFSVASLAVASMAPEGQRG 145

Query: 73  ETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKF 131
            + A+         +  V +        +             +   +   + P ++  K 
Sbjct: 146 RSLAFVGMGLPLATVLGVPAAQALGHATSWHAAYLLVTIVGVVTLGLLWFLMPHMTKMKP 205

Query: 132 ILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKE--FGHF 189
                       G+     +   +    G MF         +   A L+          +
Sbjct: 206 TSPLTELGALARGQVWASLLIGSVG--FGGMFAVYTYISWTMTQQAGLQENLMWLVLMAY 263

Query: 190 ITQIEWISLGGGIHFTDKDYPVKDFC 215
              +   +  GG            + 
Sbjct: 264 GIGMIAGNWLGGRLSDWSVEYGIFWA 289


>gi|227818936|ref|YP_002822907.1| metal-activated pyridoxal enzyme [Sinorhizobium fredii NGR234]
 gi|227337935|gb|ACP22154.1| metal-activated pyridoxal enzyme [Sinorhizobium fredii NGR234]
          Length = 392

 Score = 37.8 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 28/83 (33%), Gaps = 2/83 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSL 60
           ++TP  ++   ++  N+          GV L   LK   +  +   +    +G  T S+L
Sbjct: 21  LETPCLVLHADRMDRNVQRLRSRLDAMGVSLRPHLKTAKSIEVARRVMSSPEGPATVSTL 80

Query: 61  YEVMLGHEKFGGETHAYNVAYKD 83
            E        G     Y V    
Sbjct: 81  KEAEQ-FAAAGVRDIIYAVGIAP 102


>gi|65319386|ref|ZP_00392345.1| COG0787: Alanine racemase [Bacillus anthracis str. A2012]
          Length = 408

 Score = 37.8 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 32/337 (9%), Positives = 85/337 (25%), Gaps = 36/337 (10%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM------DGTTSS 58
           +D   + +N+        +  + ++ A+K       A  +     +              
Sbjct: 30  VDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAIAFVD-- 87

Query: 59  SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
              E+             Y         +  +     +       L    + A +L KK 
Sbjct: 88  EAIELREAGINVPILILGYTSV---AAAEEAIQYDVMMTVYRSEDLQGINEIANRLXKKA 144

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLC 174
            +++      S+  L +            ++    E   V G+   +    E        
Sbjct: 145 QIQVKIDTGMSRIGLQEEEVKPF-----LEELKRMEYVEVVGMFTHYSTADEIDKSYTNM 199

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIY 230
            +++ +            I +I         +     ++  +        +  K      
Sbjct: 200 QTSLFEKAVNTAKELGIHIPYIHSSNSAGSMEPSNTFQNMVRVGIGIYGMYPSKEVNHSV 259

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP--- 287
           +    A+   +   +      +  +       ++ E  +    +          +     
Sbjct: 260 VSLQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGHA 319

Query: 288 ----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
                   V GR C+   +  +     PV++GD + F
Sbjct: 320 LINGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 355


>gi|110347166|ref|YP_665984.1| D-3-hydroxyaspartate aldolase [Mesorhizobium sp. BNC1]
 gi|110283277|gb|ABG61337.1| D-3-hydroxyaspartate aldolase [Chelativorans sp. BNC1]
          Length = 387

 Score = 37.8 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 17/128 (13%), Positives = 32/128 (25%), Gaps = 19/128 (14%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLY 61
           I+TP  ++D   L  N+                A K         +  +           
Sbjct: 27  IQTPCLILDLDALERNIRKMGD----------YA-KANGMRH--RSHGKMHKSVDV---- 69

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
                 E+ GG          + E+       D ++ N V    K    A+       + 
Sbjct: 70  --QKLQERLGGSVGVCCQKVSEAEVFVRGGIKDVLVSNQVRDPAKIDRLARLPKLGSRII 127

Query: 122 INPSVSYS 129
           +      +
Sbjct: 128 VCVDDVAN 135


>gi|145234959|ref|XP_001390128.1| metal-activated pyridoxal enzyme [Aspergillus niger CBS 513.88]
 gi|134057804|emb|CAK38199.1| unnamed protein product [Aspergillus niger]
          Length = 368

 Score = 37.8 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 18/201 (8%), Positives = 49/201 (24%), Gaps = 19/201 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTS--S 58
           + TP  ++D   + +N+          G+ +   LK      +   L      G      
Sbjct: 13  LDTPSMIVDLDLMESNIQKLFSALLPTGLNIRPHLKTTKCAALAKKLVAAGAKGCCVAKV 72

Query: 59  SLYEVMLGHEKFGGETHAYNVAYKDCEID-----AVLSNCDTIIFNTVSQLNKFKDKAQK 113
           S  E +     F        +                      + ++        +  ++
Sbjct: 73  SEAEAITA-AGFDDILITCEIIGAPKVQRLVELVRKHPGRLRTVVDSEVGATAIDEALEQ 131

Query: 114 LHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFL 173
                 L +   +               R G        +  +++ GL        + + 
Sbjct: 132 AGITTPLAVLIDLDVGLH----------RTGVADVQAALALARHLAGLKHLKLIGVQGYE 181

Query: 174 CFSAMLKNIEKEFGHFITQIE 194
                + + E+     +  ++
Sbjct: 182 GHVQHIHSWEERRQECLASMK 202


>gi|330963739|gb|EGH63999.1| 3-deoxy-D-manno-octulosonic-acid transferase [Pseudomonas syringae
           pv. actinidiae str. M302091]
          Length = 426

 Score = 37.8 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 15/206 (7%), Positives = 45/206 (21%), Gaps = 10/206 (4%)

Query: 45  FDTLNQYMDGTTSSSLYE-------VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTII 97
              + +      + S+ E       +     ++                       +   
Sbjct: 43  LPVMQRGGIWVHAVSVGESIAAAPMIRALLAQYPQLPITVTCMTPTGSERIKALFANEPR 102

Query: 98  FNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN 157
                        A +    +  R+   +    +           +     +   SE   
Sbjct: 103 IQHCYLPYDLPWAAGRFLDHVQPRLGIIMETELWPNHIHQCAKRAIPVVLANARLSERSA 162

Query: 158 VNGLMFHNNCENKSFLCFSA--MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV-KDF 214
                F    +             +   + F     + E +++ G I F     P   + 
Sbjct: 163 RGYARFARLTQPMLAEMAWFAVQTEVEAQRFRDLGARPECVAVTGSIKFDLSIDPHLLER 222

Query: 215 CQRLKEFSEKYSVQIYLEPGEAIVTN 240
             +L+E  +     +++        +
Sbjct: 223 AAQLREQWQAKQRPVWIAASTHAGED 248


>gi|49481282|ref|YP_036225.1| alanine racemase [Bacillus thuringiensis serovar konkukian str.
           97-27]
 gi|49332838|gb|AAT63484.1| alanine racemase [Bacillus thuringiensis serovar konkukian str.
           97-27]
          Length = 391

 Score = 37.8 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 30/335 (8%), Positives = 84/335 (25%), Gaps = 32/335 (9%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60
           +D   + +N+        +  + ++ A+K       A  +     +              
Sbjct: 13  VDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVDEA 72

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+             Y         +  +     +       L    + A +L KK  +
Sbjct: 73  IELREAGINVPILILGYTSV---ASAEEAIQYDVMMTVYRSEDLQGINEIANRLQKKAQI 129

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176
           ++          ++        +    ++    E   V G+   +    E         +
Sbjct: 130 QVKID-----TGMSRIGLQEEEVKPFLEELKRMEYVEVVGMFTHYSTADEIDKSYTNMQT 184

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIYLE 232
           ++ +            I +I         +     ++  +        +  K      + 
Sbjct: 185 SLFEKAVNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVDHSVVS 244

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287
              A+   +   +      +  +       ++ E  +    +          +       
Sbjct: 245 LQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGHALI 304

Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
                 V GR C+   +  +     PV++GD + F
Sbjct: 305 NGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 338


>gi|322694707|gb|EFY86529.1| putative enhancer of zeste 2 isoform a [Metarhizium acridum CQMa
           102]
          Length = 1138

 Score = 37.4 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 22/199 (11%), Positives = 52/199 (26%), Gaps = 13/199 (6%)

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175
             +G  I  S S       + N   +     C    ++  +  NG+        K   C 
Sbjct: 437 CILGCLICFSHSCDHGEYDNKNMKRTFSISSCSHLSDALKQRRNGMERDRASPIKP--CR 494

Query: 176 SAMLKNIEKEFGHFITQIEWIS---------LGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226
               +         +    W+               H      P+    + L    ++  
Sbjct: 495 RQCYQRAADHVRMHLHPRPWLEDERIVLRSIFTTASHSNYTGDPICLAAEFLNRHCDE-V 553

Query: 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG 286
              +   G ++          + ++S   +    +    + H      +Q    + P + 
Sbjct: 554 YTEFKSMGISLPQPEPPEAPRIKNLSWYDRRRKALLGDWQDHT-TSHAHQRRENLEPCSH 612

Query: 287 PYTAMVCGRSCLAGDIFGE 305
               +    +C+  D+  E
Sbjct: 613 EGPCVPGVCTCVDADVLCE 631


>gi|291563798|emb|CBL42614.1| alanine racemase [butyrate-producing bacterium SS3/4]
          Length = 391

 Score = 37.4 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 41/329 (12%), Positives = 79/329 (24%), Gaps = 29/329 (8%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDGTTSSSLYE-V 63
           +D  ++  N++         G K+   +K  A    A  +  T+++++ G   +++ E +
Sbjct: 10  VDLGRIEENMEAMKEHL-RPGTKMYGVVKTDAYGHGAVPVARTIDRFVCGYAVATVDEGL 68

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
            L       E  +             L N  ++ F    +  +  D A    K   + I 
Sbjct: 69  KLRRHGIEKEILSLGPV-SAGRYQECLENDISLPFFEYRRAKELSDAAAAEGKTAKIHIA 127

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENKSFLCFSAMLKN 181
                   +      P     E  K+  E     + G+   F    E           + 
Sbjct: 128 VD----TGMSRIGLFPDEGSVETVKEIAELPALRIAGMFTHFARADEADKTNAGEQYSRF 183

Query: 182 IEKE--FGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE--PGEAI 237
                        +            +      D  +        Y      +       
Sbjct: 184 HAFCDAVKAAGVDVPVCHCSNSAGIVELPDFNMDAVRAGITIYGLYPSDEVKQDIISLKP 243

Query: 238 VTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP----DYLLYQESATIYPNTGP-----Y 288
                +  T + +I    +         E  +                    G       
Sbjct: 244 AMALKSFITYIKEIGPGTEVSYGGTFKAEKTMRIATVSAGYGDGYPRNLSGKGEVLIHGK 303

Query: 289 TAMVCGRSCLAGDIFGEFHF-EKPVKIGD 316
            A + GR C   D F          K GD
Sbjct: 304 RAKILGRIC--MDQFMVDLTGIPEAKEGD 330


>gi|187250740|ref|YP_001875222.1| alanine racemase [Elusimicrobium minutum Pei191]
 gi|186970900|gb|ACC97885.1| Alanine racemase [Elusimicrobium minutum Pei191]
          Length = 369

 Score = 37.4 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 34/330 (10%), Positives = 94/330 (28%), Gaps = 28/330 (8%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDG-----TTSS 58
           +ID + L +N++    +  N   K+L  LK  A    A  +     +          +  
Sbjct: 11  VIDLENLKHNINYVRSLL-NPKTKMLFVLKANAYGHGAVKLAKYAQENNLCDMLGTASVE 69

Query: 59  SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
              E+                 Y     +   +    I   ++S      + A K++K +
Sbjct: 70  EGVELR--ENGIKLPVLVLGSVYPFEAFETAAAYDLAITIASLSAAKAVCEIASKINKTV 127

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC-ENKSFLCFSA 177
              +       +            + +  ++  +++   + GL  H +  ++        
Sbjct: 128 YCHVKQDTGMGRIGTRRTG-----VAKILQELKQNKNIIIEGLYTHLSSTDSDEVFTSCQ 182

Query: 178 MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI 237
           +    E         I+              +  +     ++     Y +    +  +  
Sbjct: 183 LGYFEEAALAAKADNIDVEIFHAC-ATMGTLFAPRGRFDMVRLGLGAYGMVKEDKNFK-P 240

Query: 238 VTNTTTLNTTVLDISENIKNLVIVDSS--VEAHVPDYLLYQESATIYPNTGPYTAMVCGR 295
           V +  +    V D+ ++             + H+    +      +   +G    ++ G+
Sbjct: 241 VLSLKSKIVFVKDVKKDFAISYNQSFIAPKQMHIATVPVGYGDGYMRAMSGKAEVLIAGK 300

Query: 296 SC-----LAGDIFGEFHFE-KPVKIGDRIS 319
            C     +  D+      + +   +GD + 
Sbjct: 301 RCKVIGNITMDMIMVDVTDVQEATVGDEVV 330


>gi|256026803|ref|ZP_05440637.1| Serine racemase [Fusobacterium sp. D11]
 gi|289764799|ref|ZP_06524177.1| serine racemase [Fusobacterium sp. D11]
 gi|289716354|gb|EFD80366.1| serine racemase [Fusobacterium sp. D11]
          Length = 369

 Score = 37.4 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 26/210 (12%), Positives = 62/210 (29%), Gaps = 13/210 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           +KTP  L++ + L NN+     +      +L   +K   +  + +  + +   G    +L
Sbjct: 6   LKTPTILLNIEALKNNIKKYQNLCTEYKKELWPMIKTHKSMEIVEMQIKEGATGVLCGTL 65

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCD----TIIFNTVSQLNKFKDKAQKLHK 116
            E     +K   +         +  I  ++         I  +++    K    A+  + 
Sbjct: 66  DEAEACCQKGVKKIMYAYPVASEENIKRIIEMSKKTEFIIRLDSLEAAIKINKIAETENI 125

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
            I   I               +      E+ K     +++ ++    H            
Sbjct: 126 IINYTIIVDSGL--HRFGVSLKNLLTFAEELKKLKYLKLRGISSHPGHVYSSTCEADIHQ 183

Query: 177 AMLKNIEK------EFGHFITQIEWISLGG 200
            +L   E               +++I+ G 
Sbjct: 184 YVLDECETLRKAKELLEKEGYYLKYITSGS 213


>gi|254442146|ref|ZP_05055622.1| alanine racemase [Verrucomicrobiae bacterium DG1235]
 gi|198256454|gb|EDY80762.1| alanine racemase [Verrucomicrobiae bacterium DG1235]
          Length = 385

 Score = 37.4 bits (85), Expect = 3.2,   Method: Composition-based stats.
 Identities = 38/337 (11%), Positives = 87/337 (25%), Gaps = 24/337 (7%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLL-A-LKCFA-----AWGMFDTLNQYMDGTTSSSLY 61
           ID   L  NL+           ++   A +K  A        +   +   +D    +++ 
Sbjct: 15  IDLAALERNLNAIKNALP---PRIRYIAVVKADAYGHGMHQTVARLMQAGIDMYGVANVA 71

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           E     E    G +     A    E   +         ++V ++    D A+K    + +
Sbjct: 72  EAATIREIGGSGWSILILGATLREEAQFLFEYDLIPTLSSVEEVRFLDDLAEKRDANLRV 131

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
            I       +  +   +        +   +++ +    +      + E         M  
Sbjct: 132 HIKVDTGMGRLGIWHEDADELFEAMRTAKRLKLDGIYTHFSHAETDVEFTERQRRRFMTA 191

Query: 181 NIEKEFGHFITQIEWISLGGGI-HFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVT 239
                + +    +       G+  F+ +          L+     Y+  ++ +     + 
Sbjct: 192 ITRVNWINPAELLIHADNSAGLTSFSRESAYNAVRIGLLQFGITPYAQSLFAKVPTNPIF 251

Query: 240 NTTTLNTTVL----DISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTG-----PYTA 290
           +  T  + V         +      +       +              N G         
Sbjct: 252 SFKTRISLVKRLPAGTEVSYGRTCRLKRESRVAILCAGYGDGIPRSLSNKGFALIQGKRC 311

Query: 291 MVCGRSCLAGDIFGEFHFEKPVKIGD---RISFEDVA 324
              GR  +   I      E   + GD    I F+D  
Sbjct: 312 PYLGRVTMDQTIIDVTDLEVSPQAGDEACLIGFQDGG 348


>gi|307707071|ref|ZP_07643868.1| alanine racemase [Streptococcus mitis SK321]
 gi|307617597|gb|EFN96767.1| alanine racemase [Streptococcus mitis SK321]
          Length = 367

 Score = 37.4 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 47/160 (29%), Gaps = 15/160 (9%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYE 62
           LI    +  N+           +K   A+ K  A    A  +   +   +DG   S++ E
Sbjct: 12  LIHLGAIRQNIQQMGAHIPQGTLK--FAVVKANAYGHGAVAVATAIQDEVDGFCVSNIDE 69

Query: 63  V-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
              L             V+  +    A   +    +            +A      + L+
Sbjct: 70  AIELRQAGLSKRILILGVSEIEAVSLAKEYDITLTVAGLEWIQVLLDKEADLAGLTVHLK 129

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL 161
           I+  +    F  A          E+ +D ++     V G+
Sbjct: 130 IDSGMGRIGFREAGE-------AEQAQDLLKEHGAGVEGI 162


>gi|259417560|ref|ZP_05741479.1| alanine racemase domain protein [Silicibacter sp. TrichCH4B]
 gi|259346466|gb|EEW58280.1| alanine racemase domain protein [Silicibacter sp. TrichCH4B]
          Length = 351

 Score = 37.4 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 23/256 (8%), Positives = 58/256 (22%), Gaps = 17/256 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           I TP  L+D      N+        + G++L   +K      + +   +    G T   +
Sbjct: 5   IDTPAVLVDLNIAEANVRAFQDYCDSHGLQLRPHIKTHKLPRLAEYQIEQGAIGITCQKI 64

Query: 61  YEVMLGHEKFGGETHAYNVA-----YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E                                     +++ +  + +           
Sbjct: 65  TEAEAMIAGGDMRDILITYNILGQDKVARLRALSERVRLSVVADNAAVVEGLSAGFADAK 124

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEI--KNVNGLMFHNNCENKSFL 173
           K + + +  +           +R       +  +   +      +               
Sbjct: 125 KPLAVLVECNTGA--------DRCGVETPAEALELALAINAAPGLRFAGLMTYPPTGGAT 176

Query: 174 CFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEP 233
             +  L   +         +E IS GG      + + +    +            +    
Sbjct: 177 QVTTWLAEAKDLIEATDLTVEVISSGGS-PDIWRAHQMPLATEYRIGTYIYNDRSLVTRG 235

Query: 234 GEAIVTNTTTLNTTVL 249
                    T+  TV+
Sbjct: 236 TCDWDDCALTVLATVV 251


>gi|331694412|ref|YP_004330651.1| alanine racemase domain-containing protein [Pseudonocardia
          dioxanivorans CB1190]
 gi|326949101|gb|AEA22798.1| alanine racemase domain protein [Pseudonocardia dioxanivorans
          CB1190]
          Length = 374

 Score = 37.4 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 2/68 (2%)

Query: 4  TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSLYE 62
          TPY  +D   L  NLD A    + AG++L   +K   +  +     +    G T +++ E
Sbjct: 26 TPYLAVDLDVLTRNLDRAAEHARAAGLRLRPHVKTHKSPEIARRQVEAGAVGLTVATVSE 85

Query: 63 VML-GHEK 69
            +     
Sbjct: 86 AEIFCRAG 93


>gi|52143353|ref|YP_083477.1| alanine racemase [Bacillus cereus E33L]
 gi|51976822|gb|AAU18372.1| alanine racemase [Bacillus cereus E33L]
          Length = 391

 Score = 37.4 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 30/335 (8%), Positives = 85/335 (25%), Gaps = 32/335 (9%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60
           +D   + +N+        +  + ++ A+K       A  +     +              
Sbjct: 13  VDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVDEA 72

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+             Y         +  +     +       L    + A++L KK  +
Sbjct: 73  IELREAGINVPILILGYTSV---AVAEEAIQYDVMMTVYRSEDLQGINEIAKRLQKKAQI 129

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176
           ++          ++        +    ++    E   V G+   +    E         +
Sbjct: 130 QVKID-----TGMSRIGLQEEEVKPFLEELKRMEYVEVVGMFTHYSTADEIDKSYTNMQT 184

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIYLE 232
           ++ +            I +I         +     ++  +        +  K      + 
Sbjct: 185 SLFEKAVNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVDHSVVS 244

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287
              A+   +   +      +  +       ++ E  +    +          +       
Sbjct: 245 LQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGHALI 304

Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
                 V GR C+   +  +     PV++GD + F
Sbjct: 305 NGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 338


>gi|301053620|ref|YP_003791831.1| alanine racemase [Bacillus anthracis CI]
 gi|300375789|gb|ADK04693.1| alanine racemase [Bacillus cereus biovar anthracis str. CI]
          Length = 408

 Score = 37.4 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 32/335 (9%), Positives = 85/335 (25%), Gaps = 32/335 (9%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60
           +D   + +N+        +  + ++ A+K       A  +     +              
Sbjct: 30  VDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVDEA 89

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+             Y         +  +     +       L    + A +L KK  +
Sbjct: 90  IELREAGINVPILILGYTSV---AAAEEAIQYDVMMTVYRSEDLQGINEIANRLQKKAQI 146

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176
           ++      S+  L +            ++    E   V G+   +    E         +
Sbjct: 147 QVKIDTGMSRIGLQEEEVKPF-----LEELKRMEYVEVVGMFTHYSTADEIDKSYTNMQT 201

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIYLE 232
           ++ +            I +I         +     ++  +        +  K      + 
Sbjct: 202 SLFEKAVNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVDHSVVS 261

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287
              A+   +   +      +  +       ++ E  +    +          +       
Sbjct: 262 LQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGHALI 321

Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
                 V GR C+   +  +     PV++GD + F
Sbjct: 322 NGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 355


>gi|153812757|ref|ZP_01965425.1| hypothetical protein RUMOBE_03164 [Ruminococcus obeum ATCC 29174]
 gi|149831117|gb|EDM86206.1| hypothetical protein RUMOBE_03164 [Ruminococcus obeum ATCC 29174]
          Length = 380

 Score = 37.4 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 31/330 (9%), Positives = 76/330 (23%), Gaps = 27/330 (8%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKC----FAAWGMFDTLN--QYMDGTTSSSLY 61
           ++    + +N +       + G +++  +K       A  +   +   +Y+ G  +++  
Sbjct: 10  VVSLDAIAHNFEEMKKNIAD-GTRIVAVIKADGYGHGAEAISRLIEDYEYIWGFATATAE 68

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           E +   +    +         +     ++     +            D+A +  +++ + 
Sbjct: 69  EAIQLKDAGIEKPVLILGLVFEEYFQELIRKDVRLTVCEYDVAKILSDEAVRQGRQVHIH 128

Query: 122 INPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENKSFLCFSAML 179
           I         +            E+ K         + G+   F    E         + 
Sbjct: 129 IALD----TGMSRIGFADKPESVEEIKKIAALPNVEIEGMFTHFARADETDKAPAVEQLK 184

Query: 180 KN--IEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLE--PGE 235
           +             QI                   +  +        Y            
Sbjct: 185 RYLTFADLLEKAGVQIPLKHCSNSAGIIRMPEANLNLVRAGITIYGIYPSDEVERDIVKL 244

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP----DYLLYQESATIYPNTGP---- 287
                  +    V D+            + E  +                  N G     
Sbjct: 245 KPAMELKSHVAYVKDLPAGTAISYGGTFASENDLRVATIPVGYADGYPRTLSNKGWVLIH 304

Query: 288 -YTAMVCGRSCLAGDIFGEFHFEKPVKIGD 316
              A + GR C+      +      VK GD
Sbjct: 305 GQKAPILGRVCMDQ-FMVDVTHIPDVKHGD 333


>gi|54298526|ref|YP_124895.1| hypothetical protein lpp2590 [Legionella pneumophila str. Paris]
 gi|53752311|emb|CAH13743.1| hypothetical protein lpp2590 [Legionella pneumophila str. Paris]
          Length = 376

 Score = 37.4 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 22/202 (10%), Positives = 63/202 (31%), Gaps = 19/202 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
           + TP  +ID +KL  NL          G+ +    K      +     +Y   G +++ L
Sbjct: 13  LNTPCLVIDYEKLKYNLKMMQEHGFKWGIGIRPHCKTHKCTQIARLQLEYGAIGISAAKL 72

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSN-----CDTIIFNTVSQLNKFKDKAQKLH 115
            E  +   K        +    + +   + +         ++ +    +    +  + L+
Sbjct: 73  SEAEVLVSKQIANVLITSPIVSEAKHSRLFNCLKSAPDLMLVVDGKDNIRMLNELGKSLN 132

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175
           + + + ++      +  +               +        +NG+ +      + +   
Sbjct: 133 QPVYVLLDIDSGIGRTGIN-------------PEAALEYGHFINGMNWLKLKGIQCYAGH 179

Query: 176 SAMLKNIEKEFGHFITQIEWIS 197
              ++N E+     +  +E  S
Sbjct: 180 LQHIQNYEERKAFSLQIMEMAS 201


>gi|229059775|ref|ZP_04197152.1| Alanine racemase [Bacillus cereus AH603]
 gi|228719604|gb|EEL71205.1| Alanine racemase [Bacillus cereus AH603]
          Length = 408

 Score = 37.4 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 36/337 (10%), Positives = 85/337 (25%), Gaps = 36/337 (10%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60
           +D   + +N+        +  + ++ A+K       A  +  +  +              
Sbjct: 30  VDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKSAIEAGINQLAVAFVDEA 89

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+             Y        ++ V+     +    V  L    + A  L KK+ +
Sbjct: 90  IELREAGITVPILILGYTPV---AAVEDVIQYDVMMTVYRVEDLQGIDEVANHLQKKVRI 146

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCEN--KSFLCFS 176
            +      S+  L +            ++        V G+   +    E         +
Sbjct: 147 HVKIDTGMSRIGLQEEEVKPF-----FEELKRMRYVEVVGMFTHYSTADEIDKTYTNMQT 201

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
            + +              +I         +     ++  +        Y  +   +   A
Sbjct: 202 NLFEKAVNTAEELGIHFPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSREV-DHTVA 260

Query: 237 IVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATIYPNTGP---- 287
            +    +L + V  +    K           ++ E  +    +          +      
Sbjct: 261 SLQPALSLKSKVAHVKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGHAL 320

Query: 288 ---YTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISF 320
                  V GR C   D          PV++GD + F
Sbjct: 321 INGVRVPVIGRVC--MDQLMLDVTNAMPVQVGDEVVF 355


>gi|237741584|ref|ZP_04572065.1| serine racemase [Fusobacterium sp. 4_1_13]
 gi|229429232|gb|EEO39444.1| serine racemase [Fusobacterium sp. 4_1_13]
          Length = 369

 Score = 37.4 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 27/210 (12%), Positives = 63/210 (30%), Gaps = 13/210 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           +KTP  L++ + L NN+     +      +L   +K   +  + +  + +   G    +L
Sbjct: 6   LKTPTILLNIEALKNNIKKYQNLCTEYKKELWPMIKTHKSMEIVEMQIKEGATGVLCGTL 65

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCD----TIIFNTVSQLNKFKDKAQKLHK 116
            E     +K   +         +  I+ ++         I  +++    K    A+  + 
Sbjct: 66  DEAEACCQKGVKKIMYAYPVASEENINRIIEMSKKTEFIIRLDSLEAAIKINKIAETENI 125

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
            I   I               +      EK K     +++ ++    H            
Sbjct: 126 IINYTIIVDSGL--HRFGVSLKNLLAFAEKLKKLKYLKLRGISSHPGHVYSSTCEADIHQ 183

Query: 177 AMLKNIEK------EFGHFITQIEWISLGG 200
            +L   E               +++I+ G 
Sbjct: 184 YVLDECETLRKAKELLEKEGYYLKYITSGS 213


>gi|157117244|ref|XP_001658713.1| zinc finger protein [Aedes aegypti]
 gi|108876107|gb|EAT40332.1| zinc finger protein [Aedes aegypti]
          Length = 946

 Score = 37.4 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 23/273 (8%), Positives = 53/273 (19%), Gaps = 22/273 (8%)

Query: 53  DGTTSSSLYEVML---GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKD 109
            G + SSL  + L    H        +    +          +           + K  +
Sbjct: 393 CGKSCSSLANLKLHEDAHAGLKKFKCSICDKWFANRSTLERHHRTHTSL--KPFVCKICN 450

Query: 110 KAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD--KIESEIKNVNGLMFHNNC 167
           K+ +L       +      S            R  +   +    E   ++V         
Sbjct: 451 KSYRLSSFYEQHVKEGCHPSASNKCKLCSSDFRFHQDLVNHTLQEHSDEDVKIYHCKICD 510

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWIS--LGGGIHFTDKDYPVKDFCQRLKEFS--- 222
           +         +      +      Q +               +                 
Sbjct: 511 QRFIQNRLYYVHMTRHDKIASRKYQCQHCGKPFASAFAVKYHELTHTQKDIYKCSMCPKS 570

Query: 223 -------EKYSVQIYLEPGEAIVTNT--TTLNTTVLDISENIKNLVIVDSSVEAHVPDYL 273
                   ++   I+    +              +L   + I          +       
Sbjct: 571 FQNASNLNRHYEGIHKGDKKYQCDICEKRFQMPHILATHKRIHTGERPFGCEQCGKRFSD 630

Query: 274 LYQ-ESATIYPNTGPYTAMVCGRSCLAGDIFGE 305
                        G +T   CG+ C++     E
Sbjct: 631 PSTLWRHRKNVPKGKFTCQHCGKQCMSMSFLRE 663


>gi|56708932|ref|YP_164977.1| threonine aldolase, low-specificity [Ruegeria pomeroyi DSS-3]
 gi|56680617|gb|AAV97282.1| threonine aldolase, low-specificity [Ruegeria pomeroyi DSS-3]
          Length = 387

 Score = 37.4 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 23/66 (34%), Gaps = 4/66 (6%)

Query: 2  IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTS-- 57
          I+TP  ++D   L  N+       K  G++  +  K   +  +     +     G     
Sbjct: 27 IQTPCLVLDLDALERNVKKMGDYAKAHGMRHRVHGKMHKSVDVAKLQERLGGAVGVCCQK 86

Query: 58 SSLYEV 63
           S  EV
Sbjct: 87 VSEAEV 92


>gi|209519839|ref|ZP_03268623.1| alanine racemase domain protein [Burkholderia sp. H160]
 gi|209499715|gb|EDZ99786.1| alanine racemase domain protein [Burkholderia sp. H160]
          Length = 378

 Score = 37.4 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 45/172 (26%), Gaps = 11/172 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           I+TP  LID  ++  N+          GV     +K      +    +     G T S+L
Sbjct: 6   IETPAALIDVARMQINIARMQGRMNALGVAFRPHVKTTKCIEVVRAQIAAGARGITVSTL 65

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCE-----IDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E        G +   Y V+    +               ++ +  +        A    
Sbjct: 66  KEAE-AFFAAGIDDILYAVSMVPSKLPRALALRRRGCDLKLVVDNPTAAA--AIAAFGDQ 122

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
                 +   V           +P  +        +      V G+M H   
Sbjct: 123 HGETFEVWIEVDTDGHR--SGIQPEQQTLLDVGRILHENGVKVGGVMTHAGS 172


>gi|317159301|ref|XP_003191054.1| salicylate hydroxylase [Aspergillus oryzae RIB40]
          Length = 412

 Score = 37.4 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 17/55 (30%), Gaps = 2/55 (3%)

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                  PY   V G+ CL GD             G  ++FED     +     F
Sbjct: 286 WRLYRHEPYPYWVKGKVCLLGD--AAHPMMPDQSQGSCMAFEDAGALGLVFHRTF 338


>gi|42781229|ref|NP_978476.1| alanine racemase [Bacillus cereus ATCC 10987]
 gi|42737151|gb|AAS41084.1| alanine racemase [Bacillus cereus ATCC 10987]
          Length = 391

 Score = 37.4 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 32/335 (9%), Positives = 85/335 (25%), Gaps = 32/335 (9%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60
           +D   + +N+        +  + ++ A+K       A  +     +              
Sbjct: 13  VDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVDEA 72

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+             Y         +  +     +       L    + A +L KK  +
Sbjct: 73  IELREAGINVPILILGYTSV---AAAEEAIQYDVMMTVYRSEDLQGINEIANRLQKKAQI 129

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176
           ++      S+  L +            ++    E   V G+   +    E         +
Sbjct: 130 QVKIDTGMSRIGLQEEEVKPF-----LEELKRMEYVEVVGMFTHYSTADEIDKSYTNMQT 184

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIYLE 232
           ++ +            I +I         +     ++  +        +  K      + 
Sbjct: 185 SLFEKAVNAAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVDHSVVS 244

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287
              A+   +   +      +  +       ++ E  +    +          +       
Sbjct: 245 LQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGYALI 304

Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
                 V GR C+   +  +     PV++GD + F
Sbjct: 305 NGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 338


>gi|261493404|ref|ZP_05989930.1| alanine racemase [Mannheimia haemolytica serotype A2 str. BOVINE]
 gi|261496669|ref|ZP_05993049.1| alanine racemase [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261307872|gb|EEY09195.1| alanine racemase [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261311048|gb|EEY12225.1| alanine racemase [Mannheimia haemolytica serotype A2 str. BOVINE]
          Length = 374

 Score = 37.4 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 39/299 (13%), Positives = 68/299 (22%), Gaps = 30/299 (10%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYEV 63
           ID Q L +N+              LLA+ K  A          TL   +DG   + L E 
Sbjct: 8   IDSQALRHNIRLIKSFAPQQK---LLAMIKANAYGQGLLPAAGTLADMVDGFGVARLREA 64

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +   E            + D E                +   KF      L +   L   
Sbjct: 65  LEIQETGYTGKIVLVEGFFDREELLK------------TLSRKFDTVIHNLEQLELLEQV 112

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
                ++       R              +    ++  M       +    F   LKN  
Sbjct: 113 AKEWQAEQQKGFWTRKAKIY------FPINIWLKIDTGMHRLGIHPEQVDHFVERLKNCA 166

Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243
                    +   S    +     +  +  F Q  +++ + +   I    G         
Sbjct: 167 LVNSISF--VSHFSRADELDCGYTEKQIAVFEQATQKYQD-HDRSISASSGILYWKQAHY 223

Query: 244 LNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDI 302
                  I  +  +      +     P   L      +  +         G      D 
Sbjct: 224 DWVRPG-IIMHGISPHYTPITDLGFKPVMTLSSSLIAVRTHKAGEPVGYGGAWVSPKDT 281


>gi|254360577|ref|ZP_04976726.1| alanine racemase [Mannheimia haemolytica PHL213]
 gi|153091117|gb|EDN73122.1| alanine racemase [Mannheimia haemolytica PHL213]
          Length = 374

 Score = 37.4 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 39/299 (13%), Positives = 68/299 (22%), Gaps = 30/299 (10%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYEV 63
           ID Q L +N+              LLA+ K  A          TL   +DG   + L E 
Sbjct: 8   IDSQALRHNIRLIKSFAPQQK---LLAMIKANAYGQGLLPAAGTLADMVDGFGVARLREA 64

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +   E            + D E                +   KF      L +   L   
Sbjct: 65  LEIQETGYTGKIVLVEGFFDREELLK------------TLSRKFDTVIHNLEQLELLEQV 112

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
                ++       R              +    ++  M       +    F   LKN  
Sbjct: 113 AKEWQAEQQKGFWTRKAKIY------FPINIWLKIDTGMHRLGIHPEQVDHFVERLKNCA 166

Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243
                    +   S    +     +  +  F Q  +++ + +   I    G         
Sbjct: 167 LVNSISF--VSHFSRADELDCGYTEKQIAVFEQATQKYQD-HDRSISASSGILYWKQAHY 223

Query: 244 LNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDI 302
                  I  +  +      +     P   L      +  +         G      D 
Sbjct: 224 DWVRPG-IIMHGISPHYTPITDLGFKPVMTLSSSLIAVRTHKAGEPVGYGGAWVSPKDT 281


>gi|330873826|gb|EGH07975.1| 3-deoxy-D-manno-octulosonic-acid transferase [Pseudomonas syringae
           pv. morsprunorum str. M302280PT]
          Length = 426

 Score = 37.4 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 15/206 (7%), Positives = 45/206 (21%), Gaps = 10/206 (4%)

Query: 45  FDTLNQYMDGTTSSSLYE-------VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTII 97
              + +      + S+ E       +     ++                       +   
Sbjct: 43  LPVMQRGGIWVHAVSVGESIAAAPMIRALLAQYPQLPITVTCMTPTGSERIKALFANEPR 102

Query: 98  FNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKN 157
                        A +    +  R+   +    +           +     +   SE   
Sbjct: 103 IQHCYLPYDLPWAAGRFLDHVQPRLGIIMETELWPNHIHQCAKRAIPVVLANARLSERSA 162

Query: 158 VNGLMFHNNCENKSFLCFSA--MLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV-KDF 214
                F    +             +   + F     + E +++ G I F     P   + 
Sbjct: 163 RGYARFARLTQPMLAEMAWFAVQTEVEAQRFRDLGARPECVAVTGSIKFDLSIDPHLLER 222

Query: 215 CQRLKEFSEKYSVQIYLEPGEAIVTN 240
             +L+E  +     +++        +
Sbjct: 223 AAQLREQWQATQRPVWIAASTHAGED 248


>gi|320547461|ref|ZP_08041747.1| alanine racemase [Streptococcus equinus ATCC 9812]
 gi|320447806|gb|EFW88563.1| alanine racemase [Streptococcus equinus ATCC 9812]
          Length = 368

 Score = 37.0 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 32/99 (32%), Gaps = 7/99 (7%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFA----AWGMFDTLNQYMDGTTSSSLYE 62
           LID   +  N++           K   A+ K  A    A  +   ++  +DG   S++ E
Sbjct: 12  LIDLGAICQNIEAVK--ANIPEGKKAFAVVKANAYGHGAKKVAQAVHHLVDGFCVSNVDE 69

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTV 101
            +   E    ET          E+        T+   + 
Sbjct: 70  ALELREAGIEETILILGVIMPNEVALARDYDITLTVASQ 108


>gi|325523234|gb|EGD01604.1| carotenoid oxygenase [Burkholderia sp. TJI49]
          Length = 443

 Score = 37.0 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 19/217 (8%), Positives = 45/217 (20%), Gaps = 13/217 (5%)

Query: 38  CFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTI 96
                 +     + +  +   + + +    +  G    HA              S  + I
Sbjct: 102 TNPNVSVLQHAGELLALSDGGAPFAITAALDSLGAPARHAGFDGAMAAHPKLDPSTGELI 161

Query: 97  IFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK 156
            F    +  + +      H    + +   +     +          L             
Sbjct: 162 AFQADWRAPRLRYGVADAHGVQRVDLAIDLPAPSMMHDLAITETRSLVLDLN-------- 213

Query: 157 NVNGLMFHNNCE-NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGI-HFTDKDYPVKDF 214
              G  F    + ++  L +                 + W  +           Y     
Sbjct: 214 --VGYDFSLLKQGHRMPLRWHDERDARIGVLPRHGGDVRWFGVEPCFILHVVNAYDCDAE 271

Query: 215 CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251
           C  L        +++    G         L   V+D 
Sbjct: 272 CVVLDAVRYPSFLRLDARTGRFADNPVGELWRYVIDT 308


>gi|160915859|ref|ZP_02078067.1| hypothetical protein EUBDOL_01881 [Eubacterium dolichum DSM 3991]
 gi|158432335|gb|EDP10624.1| hypothetical protein EUBDOL_01881 [Eubacterium dolichum DSM 3991]
          Length = 382

 Score = 37.0 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 35/334 (10%), Positives = 80/334 (23%), Gaps = 29/334 (8%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYM-DGTTSSSLYEV 63
           I   ++ +N+     +      K++  +K  A           L +   D    SS+ E 
Sbjct: 12  IHVSRIEHNVAEIQKLLLGTN-KIMGIVKANAYGHGDVVCAKELERIGIDFFGVSSVDEA 70

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +   E                    +     T    ++    K    A    + I + + 
Sbjct: 71  LSLREGGISSPILILGYTPPVHFPLLKKYRLTQTILSLEYAKKLNAYALAHDECIDVHVK 130

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE-----NKSFLCFSAM 178
                S+  +   +  +     K    ++          F  + +              +
Sbjct: 131 LDTGMSRIGIVTQSHAYHIEEVKAVYALKGLHACGIFSHFPVSDDLGEDAQAFTKHQIEL 190

Query: 179 LKNIEKEFGHFITQIEWISLGGGIH---FTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
            + +  +      ++    +        + D DY            +    + I   P  
Sbjct: 191 FEQVLADLKQAGIEVGLRHIQNSYGILNYPDLDYDYARPGLLWMGITSDDEIAIKTNPDF 250

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVP------------DYLLYQESATIYP 283
             V       + V  I + +                              L    A +  
Sbjct: 251 LPVMEWKANVSLVKTIEKGVTVSYGRHYKASETRRIATLSVGYADGYPRSLSNTHAYVLI 310

Query: 284 NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDR 317
           +     A + G  C+   +  +    + VK GD 
Sbjct: 311 HGK--RAEIIGNICMDQ-MMVDVSDIEDVKEGDV 341


>gi|323340097|ref|ZP_08080362.1| alanine racemase [Lactobacillus ruminis ATCC 25644]
 gi|323092474|gb|EFZ35081.1| alanine racemase [Lactobacillus ruminis ATCC 25644]
          Length = 380

 Score = 37.0 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 28/84 (33%), Gaps = 9/84 (10%)

Query: 8  LIDKQKLLNNLDTALYIRKNAGVKLLLA-LKCFA----AWGMFDTLNQYMD-GTTSSSLY 61
          +ID   + +N++      +    + L A +K  A       +  T  +    G   + + 
Sbjct: 18 VIDLDAIKHNIEIEKKRMR--DDQKLFAVVKANAYGHGMIEVARTAKEAGANGFCVAIID 75

Query: 62 E-VMLGHEKFGGETHAYNVAYKDC 84
          E + L +  F        V   + 
Sbjct: 76 EGIELRNAGFDDLVLILGVCPAEQ 99


>gi|312868223|ref|ZP_07728423.1| alanine racemase [Streptococcus parasanguinis F0405]
 gi|311095968|gb|EFQ54212.1| alanine racemase [Streptococcus parasanguinis F0405]
          Length = 370

 Score = 37.0 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 19/145 (13%), Positives = 44/145 (30%), Gaps = 8/145 (5%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFAA----WGMFDTLNQYMDGTTSSSLYEV 63
           +D   +  N+        +  +K   A+ K  A       +   L   +DG   S++ E 
Sbjct: 13  VDLDAIAFNVQQVSDHIPSQALK--YAVVKANAYGHGVVAVTKKLAPQVDGFCVSNMDEA 70

Query: 64  MLGH-EKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
           +    E          V   +    A   +    + +    +     +A     K+ +++
Sbjct: 71  LEIREEGLQHPLLILGVVPSETVNLAKEHDIRLTVASLAWLVQLLGQEADLSGLKVHIKV 130

Query: 123 NPSVSYSKFILADPNRPFSRLGEKC 147
           +  +    F   +  +   RL    
Sbjct: 131 DSGMGRIGFRTIEEIKEAERLLIAA 155


>gi|317127074|ref|YP_004093356.1| alanine racemase [Bacillus cellulosilyticus DSM 2522]
 gi|315472022|gb|ADU28625.1| alanine racemase [Bacillus cellulosilyticus DSM 2522]
          Length = 381

 Score = 37.0 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 38/334 (11%), Positives = 82/334 (24%), Gaps = 30/334 (8%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYMDGTT---SSSLY 61
           +D   +  N+         + V ++ A+K      ++  + +       G T    + L 
Sbjct: 15  VDLNAIRENVKNLKNHLP-SHVHIMAAVKANGYGHSSVPVAE--AALQAGATYLGVALLD 71

Query: 62  EVMLGHE-KFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
           E +   E                    A   +    +F +       K        KI  
Sbjct: 72  EAIELRENGIKAPILVLGYVSPKYVNVAAEYDIRLTVFQSEWVEEAAKVLEADNKGKIAC 131

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCE--NKSFLCFSAM 178
            +         +        + L  K K      I+ +    +    E            
Sbjct: 132 HVKIDTG-MGRLGIRTKEEGNALIVKLKKYSLFTIEGL-FTHYATADELDTSYLELQQQR 189

Query: 179 LKNIEKEFGH-FITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAI 237
            K++   F   +  ++     G             +  +           +   E     
Sbjct: 190 FKDMISWFEATWGAEVPMKHCGNSATALRFSSEYYNLVRYGISMYGLSPSEEIKELLPFP 249

Query: 238 VTNTTTLNTTVLDISENIKNLVIVDSSVE-----AHVPDYLLYQESATIYPNTG------ 286
           +    +L + +  I +  K   I   +         +    +      I  N        
Sbjct: 250 LKQAFSLYSEITHIKKAEKGDGISYGATYKSPGEEWIGTIPIGYADGWIRANATGEVLVN 309

Query: 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
                + GR C   D        +PV+IG +++ 
Sbjct: 310 GERVPIVGRIC--MDQMMVALK-QPVQIGTKVTI 340


>gi|290962430|ref|YP_003493612.1| amino acid racemase [Streptomyces scabiei 87.22]
 gi|260651956|emb|CBG75086.1| putative amino acid racemase [Streptomyces scabiei 87.22]
          Length = 368

 Score = 37.0 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 15/133 (11%), Positives = 36/133 (27%), Gaps = 6/133 (4%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           I TP  ++    +  N+D          +K+   +K      +    +     G T+ ++
Sbjct: 15  IDTPAPIVLVDVMQGNIDRIQSFADQRNLKVRPHIKTHKCVEIGRRQIAAGAVGVTAGNV 74

Query: 61  YEVML-GHEKFG----GETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E  +     F                        S    +  + V+ +    D   +  
Sbjct: 75  GEAEVFAAAGFDDIFLAYPIWAAGTKGPRIRRLTESARLRVGVDNVAAIEALADAMGEEP 134

Query: 116 KKIGLRINPSVSY 128
            ++ + I      
Sbjct: 135 DRLQVVIEVDCGA 147


>gi|229011407|ref|ZP_04168598.1| Alanine racemase [Bacillus mycoides DSM 2048]
 gi|229166972|ref|ZP_04294719.1| Alanine racemase [Bacillus cereus AH621]
 gi|228616600|gb|EEK73678.1| Alanine racemase [Bacillus cereus AH621]
 gi|228749924|gb|EEL99758.1| Alanine racemase [Bacillus mycoides DSM 2048]
          Length = 408

 Score = 37.0 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 36/337 (10%), Positives = 86/337 (25%), Gaps = 36/337 (10%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60
           +D   + +N+        +  + ++ A+K       A  +  +  +              
Sbjct: 30  VDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKSAIEAGINQLAVAFVDEA 89

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+             Y        ++ V+     +    V  L    + A  L KK+ +
Sbjct: 90  IELREAGITVPILILGYTPV---AAVEDVIQYDVMMTVYRVEDLQGIDEVANHLQKKVRI 146

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCEN--KSFLCFS 176
            +      S+  L +            ++        V G+   +    E         +
Sbjct: 147 HVKIDTGMSRIGLQEEEVKPF-----FEELKRMRYVEVVGMFTHYSTADEIDKTYTNMQT 201

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
           ++ +              +I         +     ++  +        Y  +   +   A
Sbjct: 202 SLFEKAVNTAEELGIHFPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSREV-DHTVA 260

Query: 237 IVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATIYPNTGP---- 287
            +    +L + V  +    K           ++ E  +    +          +      
Sbjct: 261 SLQPALSLKSKVAHVKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGHAL 320

Query: 288 ---YTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISF 320
                  V GR C   D          PV++GD + F
Sbjct: 321 INGVRVPVIGRVC--MDQLMLDVTNAMPVQVGDEVVF 355


>gi|163797790|ref|ZP_02191736.1| alanine racemase-like protein [alpha proteobacterium BAL199]
 gi|159176912|gb|EDP61478.1| alanine racemase-like protein [alpha proteobacterium BAL199]
          Length = 379

 Score = 37.0 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 45/135 (33%), Gaps = 9/135 (6%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG---TTSS 58
           + TP+ ++D++KL +NL          GV+L    K   +  +        DG    T S
Sbjct: 6   LPTPHLVLDRRKLEHNLARMRGRASELGVRLRPHGKTAKSAEVVR--RAVGDGPVMVTVS 63

Query: 59  SLYEV-MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDT---IIFNTVSQLNKFKDKAQKL 114
           +L E             HA  +A       A L        I  ++ +   +     ++ 
Sbjct: 64  TLREAGYFAENGIRDIVHANCIAPNRLPEAAALLRDGVNLAITTDSPAVAAEIVRAGREF 123

Query: 115 HKKIGLRINPSVSYS 129
             +  + I   V   
Sbjct: 124 GVRFAVMIEVDVGEH 138


>gi|159044653|ref|YP_001533447.1| hypothetical protein Dshi_2109 [Dinoroseobacter shibae DFL 12]
 gi|157912413|gb|ABV93846.1| hypothetical protein Dshi_2109 [Dinoroseobacter shibae DFL 12]
          Length = 383

 Score = 37.0 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 1/60 (1%)

Query: 2  IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSL 60
          + TP  L+D+ ++  N++         G+ L   LK   +      +    +G  T S+L
Sbjct: 12 LPTPCLLVDEARMTRNIERLAQHAAALGLSLRPHLKTTKSIEAARRVLPGGNGPATVSTL 71


>gi|284046325|ref|YP_003396665.1| alanine racemase domain protein [Conexibacter woesei DSM 14684]
 gi|283950546|gb|ADB53290.1| alanine racemase domain protein [Conexibacter woesei DSM 14684]
          Length = 386

 Score = 37.0 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 38/131 (29%), Gaps = 5/131 (3%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSSL 60
           ++TP  ++D   L  N+  A    +  G+ L   LK      + +        G T++  
Sbjct: 9   LETPAVVVDLGALERNVARAGAYAREHGLALWPHLKTHKTVAVAERQRAAGVAGFTAAKT 68

Query: 61  YEVML-GHEKFGG---ETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
            E         G        +  A  +           T+  ++++         +    
Sbjct: 69  TEAERFAAHGLGPLLLHYPVFGAAKWERLAAVAGEAPLTVALDSLAAAEGLDRALRARGT 128

Query: 117 KIGLRINPSVS 127
              L I   V 
Sbjct: 129 SAELLIELDVG 139


>gi|71280182|ref|YP_271526.1| putative threonine aldolase [Colwellia psychrerythraea 34H]
 gi|71145922|gb|AAZ26395.1| putative threonine aldolase [Colwellia psychrerythraea 34H]
          Length = 382

 Score = 37.0 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 24/66 (36%), Gaps = 4/66 (6%)

Query: 2  IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD--GTTS-- 57
          I+TP  ++D   L  N+       K  GV+  +  K   +  +     +  D  G     
Sbjct: 24 IQTPCLIVDLDALERNITKMGQFAKEMGVRHRVHGKMHKSVDIAFLQEKLGDSCGVCCQK 83

Query: 58 SSLYEV 63
           S  EV
Sbjct: 84 VSEAEV 89


>gi|312963835|ref|ZP_07778306.1| alanine racemase [Pseudomonas fluorescens WH6]
 gi|311281870|gb|EFQ60480.1| alanine racemase [Pseudomonas fluorescens WH6]
          Length = 357

 Score = 37.0 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 65/203 (32%), Gaps = 11/203 (5%)

Query: 8   LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDGTTSSSLYEV 63
           LID Q L +N   A  +    G K L  +K  A    A  +   L    DG   + + E 
Sbjct: 7   LIDLQALRHNYRLARDV---TGAKALAVIKADAYGHGAVRVAQALEAEADGFAVACIEEA 63

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFN-TVSQLNKFKDKAQKLHKKIGLRI 122
           +                + + +  A++   D      ++ QL   +  A      I L++
Sbjct: 64  LELRAAGIRAPVLLLEGFFEADELALIIEHDFWCVVHSLWQLEAIEQAALSKPLTIWLKL 123

Query: 123 NPSVSYSKFILADPNRPFSRL---GEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAML 179
           +  +        D    + RL   G+  K  + S     + L   ++ E  +    +   
Sbjct: 124 DSGMHRVGLHPKDYQEAYQRLLASGKVAKIVLMSHFARADELDCTSSNEQVAVFDAARQG 183

Query: 180 KNIEKEFGHFITQIEWISLGGGI 202
              E    +    + W S+    
Sbjct: 184 LAAEVSLRNSPAVLGWPSVSSDW 206


>gi|160935372|ref|ZP_02082754.1| hypothetical protein CLOBOL_00267 [Clostridium bolteae ATCC
          BAA-613]
 gi|158441730|gb|EDP19430.1| hypothetical protein CLOBOL_00267 [Clostridium bolteae ATCC
          BAA-613]
          Length = 371

 Score = 37.0 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 10/74 (13%), Positives = 26/74 (35%), Gaps = 2/74 (2%)

Query: 4  TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSLYE 62
          TP  +  K  +  N+   + +  NA  +L   +K      + +  +   +     +++ E
Sbjct: 16 TPCLIYYKDIIEQNIKEMISVAGNAN-RLWPHVKSHKMKKLVELQIKMGITRFKCATIAE 74

Query: 63 VMLGHEKFGGETHA 76
            +  E    +   
Sbjct: 75 AQMVAESGASDALV 88


>gi|322390146|ref|ZP_08063680.1| alanine racemase [Streptococcus parasanguinis ATCC 903]
 gi|321143177|gb|EFX38621.1| alanine racemase [Streptococcus parasanguinis ATCC 903]
          Length = 370

 Score = 37.0 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 22/184 (11%), Positives = 50/184 (27%), Gaps = 11/184 (5%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLAL-KCFAA----WGMFDTLNQYMDGTTSSSLYEV 63
           +D   +  N+        +  +K   A+ K  A       +   L   +DG   S++ E 
Sbjct: 13  VDLDAIAFNVQQVSDHIPSQALK--YAVVKANAYGHGVVAVTKKLAPQVDGFCVSNMDEA 70

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           +   E+                ++    +   +   +   L        +     GL+++
Sbjct: 71  LEIREEGLQHPILILGVVPSETVNLAKEHDIRLTVAS---LAWLDQLLGQEADLSGLKVH 127

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
             V      +        +  E+      +EI+ +    F    E       +      E
Sbjct: 128 IKVDSGMGRIGFRRIEEIKEAERLLLAAGAEIEGI-FTHFATADEADDRKFQAQYQFFKE 186

Query: 184 KEFG 187
               
Sbjct: 187 VLAA 190


>gi|83816534|ref|YP_446532.1| metal-activated pyridoxal enzyme [Salinibacter ruber DSM 13855]
 gi|83757928|gb|ABC46041.1| metal-activated pyridoxal enzyme [Salinibacter ruber DSM 13855]
          Length = 388

 Score = 37.0 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 31/88 (35%), Gaps = 2/88 (2%)

Query: 2  IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
          + TP  LI++ +L  NL           V L   +K   +  + +   Q    G T +++
Sbjct: 6  LSTPALLIEQSRLQENLAAMQATADANDVTLRPHVKTHKSVAIAEQQQQRGAEGLTVATV 65

Query: 61 YEVM-LGHEKFGGETHAYNVAYKDCEID 87
          +E        F     AY V  +     
Sbjct: 66 HEAETFVAAGFDDVRVAYPVVGRPKHER 93


>gi|317508489|ref|ZP_07966156.1| adenosine deaminase [Segniliparus rugosus ATCC BAA-974]
 gi|316253180|gb|EFV12583.1| adenosine deaminase [Segniliparus rugosus ATCC BAA-974]
          Length = 326

 Score = 37.0 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 10/84 (11%), Positives = 20/84 (23%), Gaps = 21/84 (25%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFD-------TLNQYMDG 54
           + T     D   L         ++      +  A        +          +  Y+  
Sbjct: 33  LPT----YDAAALTERYRHFTNLQSFLD--VYYA-----NLAVLREPTDFYDLMAAYLRR 81

Query: 55  TTSSSLYEVMLGHEKFGGETHAYN 78
             ++    V      F  +TH  N
Sbjct: 82  AEAAG---VRRAEVFFDPQTHLNN 102


>gi|206975085|ref|ZP_03235999.1| alanine racemase [Bacillus cereus H3081.97]
 gi|217959579|ref|YP_002338131.1| alanine racemase [Bacillus cereus AH187]
 gi|222095721|ref|YP_002529778.1| alanine racemase [Bacillus cereus Q1]
 gi|206746506|gb|EDZ57899.1| alanine racemase [Bacillus cereus H3081.97]
 gi|217065584|gb|ACJ79834.1| alanine racemase [Bacillus cereus AH187]
 gi|221239779|gb|ACM12489.1| alanine racemase [Bacillus cereus Q1]
          Length = 391

 Score = 37.0 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 35/336 (10%), Positives = 87/336 (25%), Gaps = 34/336 (10%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60
           +D   + +N+        +  + ++ A+K       A  +     +              
Sbjct: 13  VDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVDEA 72

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+             Y         +  +     +       L    + A +L KK  +
Sbjct: 73  IELREAGINVPILILGYTSV---ASAEEAIQYDVMMTVYRSEDLQGINEIANRLQKKAQI 129

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176
           ++          ++        +    ++    E   V G+   +    E         +
Sbjct: 130 QVKID-----TGMSRIGLQEEEVKPFLEELKRMEYVEVVGMFTHYSTADEIDKSYTNMQT 184

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
           ++ +            I +I         +     ++  +        Y  +   +    
Sbjct: 185 SLFEKAVNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEV-DHSVV 243

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPNTGP- 287
            +    +L + V  I    KN  +   +          A +P       +  +       
Sbjct: 244 SLQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATIPIGYADGYNRQLSNKGHAL 303

Query: 288 ---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
                  V GR C+   +  +     PV++GD + F
Sbjct: 304 INGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 338


>gi|302035997|ref|YP_003796319.1| hypothetical protein NIDE0621 [Candidatus Nitrospira defluvii]
 gi|300604061|emb|CBK40393.1| conserved protein of unknown function [Candidatus Nitrospira
           defluvii]
          Length = 720

 Score = 37.0 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 11/90 (12%), Positives = 24/90 (26%), Gaps = 22/90 (24%)

Query: 1   MIKTP----YYLIDKQKLLNNLDTALYIRKNAGVKLLLAL-------------KCFAAWG 43
           ++ TP      ++    L + ++      KN  ++   A              K      
Sbjct: 601 VLSTPNTLLTLVVGGDHLSDGIEAIQTALKNPVLRPHYAYIEAKRLGERFGTRKAN---- 656

Query: 44  MFDTLNQYMDGTTSSSLYEVMLGHEKFGGE 73
               +   +D     S  E+    E    +
Sbjct: 657 -LKAVADLLDDAVVMSPAEIRRAAELTKAD 685


>gi|324326142|gb|ADY21402.1| alanine racemase [Bacillus thuringiensis serovar finitimus YBT-020]
          Length = 408

 Score = 36.7 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 31/335 (9%), Positives = 83/335 (24%), Gaps = 32/335 (9%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60
           +D   + +N+        +  + ++ A+K       A  +     +              
Sbjct: 30  VDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVDEA 89

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+             Y       +               +       + A +L KK  +
Sbjct: 90  IELREAGINVPILILGYTSVAAAEDAIQYDVMMTVYRSEDLQG---INEIANRLQKKAQI 146

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176
           ++      S+  L +            ++    E   V G+   +    E         +
Sbjct: 147 QVKIDTGMSRIGLQEEEVKPF-----LEELKRMEYVEVVGMFTHYSTADEIDKSYTNMQT 201

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIYLE 232
           ++ +            I +I         +     ++  +        +  K      + 
Sbjct: 202 SLFEKAVNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVDHSVVS 261

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287
              A+   +   +      +  +       ++ E  +    +          +       
Sbjct: 262 LQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGHALI 321

Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
                 V GR C+   +  +     PV++GD + F
Sbjct: 322 NGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 355


>gi|298292611|ref|YP_003694550.1| alanine racemase domain protein [Starkeya novella DSM 506]
 gi|296929122|gb|ADH89931.1| alanine racemase domain protein [Starkeya novella DSM 506]
          Length = 391

 Score = 36.7 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 39/134 (29%), Gaps = 7/134 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM--DGTTSSS 59
           I+TP  ++D   L  N+       K  G++     K   +  +           G     
Sbjct: 31  IQTPCLILDLDALERNIRKMGDYAKAHGMRHRSHGKMHKSVDVQKLQEALGGSVGVCCQK 90

Query: 60  LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNC-----DTIIFNTVSQLNKFKDKAQKL 114
           + E  +       +    N      +ID +          T+  + V  +      A K 
Sbjct: 91  VAEAEVFARGGIKDILVTNEVRDAAKIDRLARLPKFGATVTVCVDDVKNVADISAAAVKH 150

Query: 115 HKKIGLRINPSVSY 128
             ++G+ +      
Sbjct: 151 GTELGIFVEIDCGA 164


>gi|282852968|ref|ZP_06262305.1| alanine racemase [Propionibacterium acnes J139]
 gi|282582421|gb|EFB87801.1| alanine racemase [Propionibacterium acnes J139]
          Length = 375

 Score = 36.7 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 40/341 (11%), Positives = 88/341 (25%), Gaps = 35/341 (10%)

Query: 3   KTPYY-LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTL-----NQYM 52
            +P + +ID   +  NL       +    K+L A+K  A    A  +   +       ++
Sbjct: 5   PSPSHAIIDLSAIAANLAVVRK--RAGDRKVLFAVKADAYGHGAVEVSRYVEKHRYADWL 62

Query: 53  DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112
              T +   E++                    ++DA +++   +       L      A 
Sbjct: 63  AVATVAEGQELVEAGITLP---ILKLSPADPWDMDAAITSGIRLTVVDFDTLEAVSKAAV 119

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL-------MFHN 165
           +L     + I       +  L        RL E       ++   V G+           
Sbjct: 120 RLGVTAKIHIAVDSGMGRIGLCP-----ERLAELTAAADRAKGVEVEGVFTHLPISDVPE 174

Query: 166 NCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
             E       + M      E       +  ++  G I   D           +    +  
Sbjct: 175 GAEFTRREIDTFMTAVSLVETHRGPFPLVHLANSGAILGHDLGKTSMVRAGIVGYGYDPN 234

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285
                 +   A+   +       + + + I       +S    +    +          +
Sbjct: 235 PHADRADLHPALSWISHVTFVKTVSVGDTIGYGRTWTASETTKIATVPVGYADGLSRGLS 294

Query: 286 GP-------YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319
                        + GR C+      +   +  V +GD + 
Sbjct: 295 NKGYVLIRGSVHPIVGRICMDQ-FMVDLGPDSNVTVGDEVV 334


>gi|258625986|ref|ZP_05720851.1| alanine racemase [Vibrio mimicus VM603]
 gi|258581734|gb|EEW06618.1| alanine racemase [Vibrio mimicus VM603]
          Length = 375

 Score = 36.7 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 9/60 (15%), Positives = 22/60 (36%), Gaps = 2/60 (3%)

Query: 9  IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE 68
          I+   L +NL      ++    K++ A+K          + +Y  G  +  +  +    +
Sbjct: 22 INLDALQHNLQRVK--QQAPHSKIMAAVKANGYGHGLRHIARYALGADAFGVARIEEALQ 79


>gi|187736333|ref|YP_001878445.1| alanine racemase [Akkermansia muciniphila ATCC BAA-835]
 gi|187426385|gb|ACD05664.1| alanine racemase [Akkermansia muciniphila ATCC BAA-835]
          Length = 367

 Score = 36.7 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 38/330 (11%), Positives = 89/330 (26%), Gaps = 25/330 (7%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTS-----SSLYEV 63
           ID   L +NL+    +      +L+  +K  A     + + + +DG        +++ E 
Sbjct: 13  IDTNALRHNLNVVRRVM--PDHRLMAIVKAEAYGHGLEGVVKALDGEDCAFFGVATVAEA 70

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
               +              + E + ++ N      +++ +   F            + ++
Sbjct: 71  CRVRDAGAKTCPFILGPCFEGEREEIVQNGWRAALSSMEEAEHFNSL--GALYGKTVHVH 128

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
             V                L +K K     +++ V         ++ SF           
Sbjct: 129 LGVDTGMGRSGFLPSELHGLTDKLKQFSYLDLEGV-FSHLSAASDDISFTHGQISGFTEA 187

Query: 184 KEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243
                   + ++  L       +   P  +  +  +     Y       P    +  T T
Sbjct: 188 VNELSQGHRYKFRHLCSSAAVFNYKVPCANMARLGRIL---YGYSPMPSPYNKELRPTMT 244

Query: 244 LNTTVLDISENIKNLVIVDSSVEAHVPDYLL------YQESATIYPNTGPYTAMVCGRSC 297
           L + +  I     N  +  +          +      Y +    Y +       + G+ C
Sbjct: 245 LYSRITLIRTLPGNHGVSYNHCYITKGSTKVATIGIGYADGYLQYLSNQGARVYINGQYC 304

Query: 298 -----LAGDIFGEFHFEKP-VKIGDRISFE 321
                +  D           V+ GD +   
Sbjct: 305 PVLGRVTMDQIMVDVTYMDHVETGDLVEIM 334


>gi|119716682|ref|YP_923647.1| hypothetical protein Noca_2456 [Nocardioides sp. JS614]
 gi|119537343|gb|ABL81960.1| conserved hypothetical protein [Nocardioides sp. JS614]
          Length = 411

 Score = 36.7 bits (83), Expect = 5.3,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 28/69 (40%), Gaps = 4/69 (5%)

Query: 2  IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF--DTLNQYMDGTTSSS 59
          + TP +++D      N      +R+ AG  + LA K      +         ++G  + +
Sbjct: 32 LPTPLFVVDLDAFDANATDL--VRRAAGKPVRLATKSVRVPALISRALERDGIEGVLAYT 89

Query: 60 LYEVMLGHE 68
          L E +  HE
Sbjct: 90 LGEALWLHE 98


>gi|289626818|ref|ZP_06459772.1| alanine racemase domain-containing protein [Pseudomonas syringae
           pv. aesculi str. NCPPB3681]
          Length = 159

 Score = 36.7 bits (83), Expect = 5.5,   Method: Composition-based stats.
 Identities = 19/157 (12%), Positives = 39/157 (24%), Gaps = 9/157 (5%)

Query: 16  NNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSLYEVMLGHEKFGGET 74
            N+    +     GV+L   +K      +    +     G T S+L E      +   + 
Sbjct: 3   RNIQRMQHRMNELGVRLRPHVKTSKCLPVIQAQIAAGASGVTVSTLKEAEHCFAEGINDV 62

Query: 75  ---HAYNVAYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSK 130
               A      D  +    + C   I+ ++V         A          +   +    
Sbjct: 63  FYAVAIAPGKLDQALKLRRNGCRLSILTDSVVAAQAI--VAFGQQHDEHFDVWIEIDCDG 120

Query: 131 FILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC 167
                               +     ++ G+M H   
Sbjct: 121 HRSGLTV--DDPALVDVARTLVEGGMHLRGVMTHAGS 155


>gi|163939906|ref|YP_001644790.1| alanine racemase [Bacillus weihenstephanensis KBAB4]
 gi|229132940|ref|ZP_04261783.1| Alanine racemase [Bacillus cereus BDRD-ST196]
 gi|163862103|gb|ABY43162.1| alanine racemase [Bacillus weihenstephanensis KBAB4]
 gi|228650522|gb|EEL06514.1| Alanine racemase [Bacillus cereus BDRD-ST196]
          Length = 408

 Score = 36.7 bits (83), Expect = 5.5,   Method: Composition-based stats.
 Identities = 36/337 (10%), Positives = 86/337 (25%), Gaps = 36/337 (10%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60
           +D   + +N+        +  + ++ A+K       A  +  +  +              
Sbjct: 30  VDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKSAIEAGINQLAVAFVDEA 89

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+             Y        ++ V+     +    V  L    + A  L KK+ +
Sbjct: 90  IELREAGITVPILILGYTPV---AAVEDVIQYDVMMTVYRVEDLQGIDEVANHLQKKVRI 146

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCEN--KSFLCFS 176
            +      S+  L +            ++        V G+   +    E         +
Sbjct: 147 HVKIDTGMSRIGLQEEEVKPF-----FEELKRMRYVEVVGMFTHYSTADEIDKTYTNMQT 201

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
           ++ +              +I         +     ++  +        Y  +   +   A
Sbjct: 202 SLFEKAVNTAEELGIHFPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSREV-DHTVA 260

Query: 237 IVTNTTTLNTTVLDISENIK-----NLVIVDSSVEAHVPDYLLYQESATIYPNTGP---- 287
            +    +L + V  +    K           ++ E  +    +          +      
Sbjct: 261 SLQPALSLKSKVAHVKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGHAL 320

Query: 288 ---YTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISF 320
                  V GR C   D          PV++GD + F
Sbjct: 321 INGVRVPVIGRVC--MDQLMLDVTNAMPVQVGDEVVF 355


>gi|196039765|ref|ZP_03107069.1| alanine racemase [Bacillus cereus NVH0597-99]
 gi|196029468|gb|EDX68071.1| alanine racemase [Bacillus cereus NVH0597-99]
          Length = 391

 Score = 36.7 bits (83), Expect = 5.7,   Method: Composition-based stats.
 Identities = 37/336 (11%), Positives = 88/336 (26%), Gaps = 34/336 (10%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60
           +D   + +N+        +  + ++ A+K       A  +     +              
Sbjct: 13  VDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVDEA 72

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+             Y         +  +     +       L    + A +L KK  +
Sbjct: 73  IELREAGINVPILILGYTSV---AAAEEAIQYDVMMTVYRSEDLQGINEIANRLQKKAQI 129

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176
           ++      S+  L +            ++    E   V G+   +    E         +
Sbjct: 130 QVKIDTGMSRIGLQEEEVKPF-----LEELKRMEYVEVVGMFTHYSTADEIDKSYTNMQT 184

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
           ++ +            I +I         +     ++  +        Y  +   +    
Sbjct: 185 SLFEKAVNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEV-DHSVV 243

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPNTGP- 287
            +    +L + V  I    KN  +   +          A +P       +  +       
Sbjct: 244 SLQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATIPIGYADGYNRQLSNKGHAL 303

Query: 288 ---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
                  V GR C+   +  +     PV++GD + F
Sbjct: 304 INGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 338


>gi|223984016|ref|ZP_03634173.1| hypothetical protein HOLDEFILI_01463 [Holdemania filiformis DSM
           12042]
 gi|223964001|gb|EEF68356.1| hypothetical protein HOLDEFILI_01463 [Holdemania filiformis DSM
           12042]
          Length = 389

 Score = 36.7 bits (83), Expect = 5.8,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 51/164 (31%), Gaps = 7/164 (4%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA-AWGMFDTLNQYM-DGTTSSSLYEVM 64
           YL+D   +  N    L + +   VKL   LK       +   L +    G  +    E +
Sbjct: 31  YLLDLDTITENGKRMLNVARQNEVKLFFMLKQLGRNPVVARRLMELGFAGCVAVDYKEAL 90

Query: 65  LGHEKF---GGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLR 121
           +  E     G   H             V ++ + +   ++ ++ +    A +L+    L 
Sbjct: 91  VMIENGIRLGNVGHLVQTPKAA-LKKIVAAHPEVMTVYSLEKIEEIDRAAAELNCVQPLM 149

Query: 122 IN-PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFH 164
           I       S +          +L E  +     +   + G+   
Sbjct: 150 IRITDDDASLYSGQVAGFSSQQLPEILEKVQTLKHVRIGGVTVF 193


>gi|294660494|ref|NP_853282.2| thiamine biosynthesis protein ThiI [Mycoplasma gallisepticum str.
           R(low)]
 gi|284812155|gb|AAP56850.2| Thiamine biosynthesis protein ThiI [Mycoplasma gallisepticum str.
           R(low)]
 gi|284930768|gb|ADC30707.1| Thiamine biosynthesis protein ThiI [Mycoplasma gallisepticum str.
           R(high)]
 gi|284931327|gb|ADC31265.1| Thiamine biosynthesis protein ThiI [Mycoplasma gallisepticum str.
           F]
          Length = 396

 Score = 36.7 bits (83), Expect = 5.9,   Method: Composition-based stats.
 Identities = 9/61 (14%), Positives = 17/61 (27%), Gaps = 7/61 (11%)

Query: 5   PYYLIDKQKLLNNLDTAL----YIRKNAGVKLLLALK---CFAAWGMFDTLNQYMDGTTS 57
           P    DK +++ +          I   +    L A K         + D +   +D    
Sbjct: 315 PLLCYDKSQIIEHAKKIKTYEISILPYSDACSLYAPKKPITNPRIEIIDKIEAKLDFLDI 374

Query: 58  S 58
            
Sbjct: 375 V 375


>gi|228933402|ref|ZP_04096256.1| Alanine racemase [Bacillus thuringiensis serovar andalousiensis
           BGSC 4AW1]
 gi|229138804|ref|ZP_04267385.1| Alanine racemase [Bacillus cereus BDRD-ST26]
 gi|228644720|gb|EEL00971.1| Alanine racemase [Bacillus cereus BDRD-ST26]
 gi|228826266|gb|EEM72045.1| Alanine racemase [Bacillus thuringiensis serovar andalousiensis
           BGSC 4AW1]
          Length = 408

 Score = 36.7 bits (83), Expect = 5.9,   Method: Composition-based stats.
 Identities = 37/336 (11%), Positives = 88/336 (26%), Gaps = 34/336 (10%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60
           +D   + +N+        +  + ++ A+K       A  +     +              
Sbjct: 30  VDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVDEA 89

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+             Y         +  +     +       L    + A +L KK  +
Sbjct: 90  IELREAGINVPILILGYTSV---ASAEEAIQYDVMMTVYRSEDLQGINEIANRLQKKAQI 146

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176
           ++      S+  L +            ++    E   V G+   +    E         +
Sbjct: 147 QVKIDTGMSRIGLQEEEVKPF-----LEELKRMEYVEVVGMFTHYSTADEIDKSYTNMQT 201

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
           ++ +            I +I         +     ++  +        Y  +   +    
Sbjct: 202 SLFEKAVNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEV-DHSVV 260

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPNTGP- 287
            +    +L + V  I    KN  +   +          A +P       +  +       
Sbjct: 261 SLQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATIPIGYADGYNRQLSNKGHAL 320

Query: 288 ---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
                  V GR C+   +  +     PV++GD + F
Sbjct: 321 INGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 355


>gi|295090179|emb|CBK76286.1| alanine racemase [Clostridium cf. saccharolyticum K10]
          Length = 710

 Score = 36.7 bits (83), Expect = 6.0,   Method: Composition-based stats.
 Identities = 37/328 (11%), Positives = 85/328 (25%), Gaps = 25/328 (7%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWG----MFDTLNQYMD-GTTSSSLYE- 62
           + KQ+L  N+D    +    G +L+ A+K  A       +   L +        +S+ E 
Sbjct: 348 LSKQQLYQNVDALSQLLP-PGCQLMPAVKANAYGHGAVLIAKALQEKGIRAFCVASVTEG 406

Query: 63  VMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
           V L      G        + D             + +           A +   ++ L+I
Sbjct: 407 VELRKNGITGTILILGYTHPDSFPLLWKYRLTQTVVD-YPYAQSLN--ACRKKVQVHLKI 463

Query: 123 NPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNI 182
           +  +                        ++    ++         + +     +     +
Sbjct: 464 DTGMHRLGIRSDHIEEISRMFQMD-NLLVDGIYTHLCVSDSMTAADREFTYQQANAFYTL 522

Query: 183 EKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ---RLKEFSEKYSVQIYLEPGEAIVT 239
            ++          I L              ++ +    L         +         V 
Sbjct: 523 LEKLSERGISCPNIHLSASYGLIHYPEFPSNYARIGIALYGMLSSRQDEENCSIPLFPVL 582

Query: 240 NTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT----------GPYT 289
           +     ++V D+ +       +    + +    +L    A   P +              
Sbjct: 583 SVKARVSSVRDLYKGEGAGYGLRYVAKENRQIAVLSIGYADGIPRSLSNGHGRVLINGQF 642

Query: 290 AMVCGRSCLAGDIFGEFHFEKPVKIGDR 317
           A + G  C+   +  +    K VK GD 
Sbjct: 643 APIIGNICMDQ-MLVDVTDIKEVKQGDI 669


>gi|162146534|ref|YP_001600993.1| alanine racemase, catabolic [Gluconacetobacter diazotrophicus PAl
           5]
 gi|161785109|emb|CAP54653.1| putative alanine racemase, catabolic [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 387

 Score = 36.7 bits (83), Expect = 6.2,   Method: Composition-based stats.
 Identities = 43/345 (12%), Positives = 94/345 (27%), Gaps = 38/345 (11%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLL--ALKCFA----AWGMFDTLNQYMDG-TTSSSLY 61
           ID   +  N           G + +   A+K  A    A  +   L +        + L 
Sbjct: 21  IDLDAVAANYRILRD---RVGPRTICGAAVKADAYGLGAARIVPVLAEAGCHTFFVAHLA 77

Query: 62  EVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTI-IFNTVSQLNKFKDKAQKLHK--KI 118
           E        G +   + +       +A L     + + N++ Q+ +++D A++  +    
Sbjct: 78  EGAAIRPLLGTDATIFVLNGAMPGTEAALHEHGLVPVLNSLEQIARWRDLARQAGRDLPA 137

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAM 178
            L+++  +S      AD +   +R G             +         E       +  
Sbjct: 138 ALQVDSGMSRFGLSDADVDALAARDGSLA-----GITPLLVMSHLACADEPAHPANHAQR 192

Query: 179 LKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPG---- 234
              +              +  G    +D  + +      L   +        ++P     
Sbjct: 193 AAFLRLRARLPAAPASLAASSGLFMGSDWHFDMVRPGAALYGINPTPGWPNPMQPVVRLQ 252

Query: 235 -----EAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYT 289
                   +   T +      I++    +  +        P        A +        
Sbjct: 253 ARIVQTRWIGPGTAVGYGAAFIADRPSRIATLAVGYGDGFPRAAGGHGHAVLPERPAAKL 312

Query: 290 AMVCGRS--CLAGDIFGEFHFEKPVKIG---DRIS----FEDVAG 325
            ++   S  CLA D+      + P+  G   D I      +  A 
Sbjct: 313 PIIGRISMDCLAVDV--TDISDAPLDAGTALDLIGPHHSIDSAAA 355


>gi|315107293|gb|EFT79269.1| alanine racemase [Propionibacterium acnes HL030PA1]
          Length = 375

 Score = 36.7 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 37/341 (10%), Positives = 83/341 (24%), Gaps = 35/341 (10%)

Query: 3   KTPYY-LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTL-----NQYM 52
            +P + +ID   +  NL       +    K+L A+K  A    A  +   +       ++
Sbjct: 5   PSPSHAIIDLSAIAANLAVVRK--RAGDRKVLFAVKADAYGHGAVEVSRYVEKHRYADWL 62

Query: 53  DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112
              T +   E++                    ++DA +++   +       L      A 
Sbjct: 63  AVATVAEGQELVEAGITLP---ILKLPPADPWDMDAAITSGIRLTVVDFDTLEAVSKAAV 119

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNC----- 167
           +L     + I          +         L E       ++   V G+  H        
Sbjct: 120 RLGITAKIHIAVDSG-----MGRIGLRPECLAELTAAADRAKGVEVEGVFTHLPISDVPE 174

Query: 168 ENKSFLCFSAMLKNIEKEFGHFITQIEWISL--GGGIHFTDKDYPVKDFCQRLKEFSEKY 225
             +                         + L   G I   D           +    +  
Sbjct: 175 GAEFPRREIDTFMTAVSLIETHRGPFPLVHLANSGAILGHDLGKTSMVRAGIVGYGYDPN 234

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285
                 +   A+   +       + + + I       +S    +    +          +
Sbjct: 235 PHADRADLHPALSWISHVTFVKTVSVGDTIGYGRTWTASETTKIATVPVGYADGLSRGLS 294

Query: 286 GPYTA-------MVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319
                        + GR C+      +   +  V +GD + 
Sbjct: 295 NKGHVLIRGSVHPIVGRICMDQ-FMVDLGPDSNVTVGDEVV 334


>gi|229096607|ref|ZP_04227578.1| Alanine racemase [Bacillus cereus Rock3-29]
 gi|229115582|ref|ZP_04244988.1| Alanine racemase [Bacillus cereus Rock1-3]
 gi|228667995|gb|EEL23431.1| Alanine racemase [Bacillus cereus Rock1-3]
 gi|228686813|gb|EEL40720.1| Alanine racemase [Bacillus cereus Rock3-29]
          Length = 408

 Score = 36.7 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 30/335 (8%), Positives = 82/335 (24%), Gaps = 32/335 (9%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60
           +D   + +N+        +  + ++ A+K       A  +     +              
Sbjct: 30  VDLNAVKHNVKEFKKHVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGVNQLAVAFVDEA 89

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+             Y                       +       + AQ+L  K  +
Sbjct: 90  IELREAGITVPILILGYTSVAAAESAIQYDVMMTVYRIEDLQG---INEIAQRLQNKARI 146

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176
           ++          ++        +    ++    E   V G+   +    E         +
Sbjct: 147 QVKID-----TGMSRIGLQEEEVKPFLEELNRMEYVEVVGMFTHYSTADEIDKSYTNMQT 201

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIYLE 232
           ++ +           QI +I         +     ++  +        +  K      + 
Sbjct: 202 SLFEKAVNTANELGMQIPYIHSSNSAGSMELSNTFQNMVRVGIGVYGMYPSKEVDHTVVS 261

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287
              A+   +   +      +  +       ++ E  +    +          +       
Sbjct: 262 LQPALSLKSKVAHVKHATKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGYALI 321

Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
                 V GR C+   +  +     PV++GD + F
Sbjct: 322 NGVRVPVIGRVCMDQ-LMLDVTKAMPVQVGDDVVF 355


>gi|86606130|ref|YP_474893.1| alanine racemase [Synechococcus sp. JA-3-3Ab]
 gi|86554672|gb|ABC99630.1| alanine racemase [Synechococcus sp. JA-3-3Ab]
          Length = 429

 Score = 36.7 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 12/136 (8%), Positives = 38/136 (27%), Gaps = 11/136 (8%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTL--------NQYMDGTTSSSL 60
           ID  +L  NL      R +   ++   +K  A       +         + +   T +  
Sbjct: 62  IDAAQLRENLRLLQ-ARLSPDTEIWAVVKANAYGHGARLVAPIALAAGAKGLCVATLAEG 120

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+     +           + + +         ++       + +    A+   + + +
Sbjct: 121 IELRQAGLQAPILVLGALNTWAELQQAMAARLEVSLTRAEQIPVMR--QVARWAGRPVPV 178

Query: 121 RINPSVSYSKFILADP 136
            +N     ++  +   
Sbjct: 179 HVNVDTGMTRLGIPWQ 194


>gi|260814894|ref|XP_002602148.1| hypothetical protein BRAFLDRAFT_234265 [Branchiostoma floridae]
 gi|229287455|gb|EEN58160.1| hypothetical protein BRAFLDRAFT_234265 [Branchiostoma floridae]
          Length = 215

 Score = 36.7 bits (83), Expect = 6.4,   Method: Composition-based stats.
 Identities = 13/211 (6%), Positives = 30/211 (14%), Gaps = 6/211 (2%)

Query: 89  VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCK 148
            +     I          F            L     +                      
Sbjct: 4   CIYWWWWIFTCLHWCWGIFTCIHWWWWIFTCLHWCWGIFTCIHWWWWIFTCLH-WCWGIF 62

Query: 149 DKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD 208
             I         L +           +                   W      +H+    
Sbjct: 63  TCIHWWWWIFTCLHWCWGIFTCIHWWWWIFTCLHWCWGIFTCIHWWWWIFT-CLHWCWGI 121

Query: 209 YPVKDFCQRLKEFSEKYSV-QIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEA 267
           +    +   +       S   +++           T       I   I            
Sbjct: 122 FTCIHWWWWIFTCLHWCSRGDLHMLLNIYWCWGIFTCVHWCWGIFTCIHWWWW---IFTC 178

Query: 268 HVPDYLLYQESATIYPNTGPYTAMVCGRSCL 298
               + ++      +             +CL
Sbjct: 179 LHWCWGIFTCVHWCWGIFTCIHWWWWIFTCL 209


>gi|307129851|ref|YP_003881867.1| metal-activated pyridoxal enzyme [Dickeya dadantii 3937]
 gi|306527380|gb|ADM97310.1| metal-activated pyridoxal enzyme [Dickeya dadantii 3937]
          Length = 381

 Score = 36.7 bits (83), Expect = 6.5,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 2/84 (2%)

Query: 2  IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSL 60
          + TP  ++D++ +L N+       + AG+ L   LK   +  +   L     G  T S+L
Sbjct: 10 LPTPSLVLDEKIMLANIARLRDRPELAGIALRPHLKTAKSVDVARRLLTNGTGPATVSTL 69

Query: 61 YEVMLGHEKFGGETHAYNVAYKDC 84
           E      + G     Y V     
Sbjct: 70 REAE-VFFESGIRDILYAVGIAPQ 92


>gi|319784209|ref|YP_004143685.1| alanine racemase domain protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317170097|gb|ADV13635.1| alanine racemase domain protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 353

 Score = 36.7 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 47/362 (12%), Positives = 99/362 (27%), Gaps = 34/362 (9%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMF-DTLNQYMDGTTSSSL 60
           + TP  LID  +   N+  A       G+KL   +K           +     G T   +
Sbjct: 8   LDTPSILIDATRAEANIARAQAHADKNGLKLRPHIKTHKLPYWAKKQVAAGAVGITCQKI 67

Query: 61  YEVM-LGHEKFGGETHAYN---VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
            E   +           YN    A  +  +        ++  +++  L            
Sbjct: 68  GEAEVMADAGLTDIFLPYNILGRAKLERLLALHGRVTLSVTADSMETLEGLAATFTDAGH 127

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
           ++ + +         +     +         +    +    +                  
Sbjct: 128 RLPVLVECD----TGMGRCGVQSADEAVALARQIDRA--GGLAFGGLMTYPAAGKAAEAE 181

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
           A L + ++         E IS GG      +        +               +    
Sbjct: 182 AWLADAKQALAASGLACERISSGGT-PDMWRSSDTSVVTEYRPGTYIYLDRYQVAKGVGT 240

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMV---C 293
           +     T+ +TV  +S       I+D+  +A   D L   +   +    G     +    
Sbjct: 241 LDDCALTVLSTV--VSHPTATRAILDAGSKALSSDTLGLADFGELPGVPGARVTGLSEEH 298

Query: 294 GRSCLAGDIFGEFHFEKPVKIGDRI-SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIK 352
           G   L+GD          ++IG+R+    D   +     N FN      + + + D  ++
Sbjct: 299 GTVTLSGD--------GKLRIGERVRVVPD---HCCVVTNLFN-----EVNLVDGDKVLE 342

Query: 353 AI 354
            +
Sbjct: 343 TL 344


>gi|19076018|ref|NP_588518.1| alanine racemase Alr1 [Schizosaccharomyces pombe 972h-]
 gi|12229634|sp|O59828|ALR1_SCHPO RecName: Full=Alanine racemase, catabolic
 gi|3136037|emb|CAA19068.1| alanine racemase Alr1 [Schizosaccharomyces pombe]
          Length = 375

 Score = 36.3 bits (82), Expect = 7.0,   Method: Composition-based stats.
 Identities = 46/344 (13%), Positives = 91/344 (26%), Gaps = 37/344 (10%)

Query: 8   LIDKQKLLNNLDTALY--IRKNAGVKLLLALKCFAAWG----MFDTLNQY---MDGTTSS 58
           +ID   + +N + A    ++KN    +L  +K  A       +   L ++   +DG   S
Sbjct: 7   VIDLHAIAHNYNVAKQMMLQKNPSGHVLAIVKANAYGHGAVQVARFLLKHCSSIDGFGVS 66

Query: 59  SLYEVMLGHEKFGGETHAYNVAY--KDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK 116
           S+ E +                +  ++ E+  +     +II ++  Q+N F         
Sbjct: 67  SIEEALELRHGGIYNKIVLLEGFFTEEDELKLIDDYNFSIIIHSEDQVNSFIKY----PF 122

Query: 117 KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFS 176
              + I   +      L      F +      +             F      ++     
Sbjct: 123 NRPVEIWLKLDSGMNRLGFTPSQFMKFYNLLSNNKNVSNIG-KITHFAFADMLENPEHTL 181

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQR----LKEFSEKYSVQIYLE 232
                 EK   H    +        + + +               +  F  K       E
Sbjct: 182 KQWDIFEKSVAHLPGPLSAGGSAIILGWLNTVCTDWLRAGIMLYGISPFLSKNKDSKTPE 241

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYL-------LYQESATIYPNT 285
                +     L +T++ +    K   I          D                   + 
Sbjct: 242 SVN--IKPAMKLVSTIISVKHVDKGQPIGYGGRYVATRDMKLGVVAMGYGDGFPRQVKDG 299

Query: 286 GP-----YTAMVCGRSCLAGDIFGEFHFE-KPVKIGDRISFEDV 323
            P       A + GR   + D+      +   VK GD + F   
Sbjct: 300 CPVLVNGVKAPIVGRV--SMDMLTVDLSDIPDVKPGDEVIFWGT 341


>gi|119716914|ref|YP_923879.1| alanine racemase domain-containing protein [Nocardioides sp.
          JS614]
 gi|119537575|gb|ABL82192.1| alanine racemase domain protein [Nocardioides sp. JS614]
          Length = 360

 Score = 36.3 bits (82), Expect = 7.0,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 1/62 (1%)

Query: 4  TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSLYE 62
          TPY  +D  +L  N++         GV L    K   +  +    L     G T +++ E
Sbjct: 10 TPYLRVDVARLRANIERTTRWAAAGGVSLRPHAKTHKSPDIARLQLAAGAIGLTVATIGE 69

Query: 63 VM 64
            
Sbjct: 70 AE 71


>gi|229029807|ref|ZP_04185878.1| Alanine racemase [Bacillus cereus AH1271]
 gi|228731522|gb|EEL82433.1| Alanine racemase [Bacillus cereus AH1271]
          Length = 408

 Score = 36.3 bits (82), Expect = 7.0,   Method: Composition-based stats.
 Identities = 32/335 (9%), Positives = 85/335 (25%), Gaps = 32/335 (9%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60
           +D   + +N+        +  + ++ A+K       A  +     +              
Sbjct: 30  VDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVDEA 89

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+             Y         +  +     +       L    + A +L KK  +
Sbjct: 90  IELREAGINVPILILGYTSV---AAAEEAIQYDVMMTVYRSEDLQGINEIANRLQKKAQI 146

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176
           ++      S+  L +            ++    E   V G+   +    E         +
Sbjct: 147 QVKIDTGMSRIGLQEEEVKPF-----LEELNRMEYIEVVGMFTHYSTADEIDKSYTNMQT 201

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIYLE 232
           ++ +            I +I         +     ++  +        +  K      + 
Sbjct: 202 SLFEKAVNAAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVDHAVVS 261

Query: 233 PGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP----- 287
              A+   +   +      +  +       ++ E  +    +          +       
Sbjct: 262 LQPALSLKSKIAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGHALI 321

Query: 288 --YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
                 V GR C+   +  +     PV++GD + F
Sbjct: 322 NGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 355


>gi|196046083|ref|ZP_03113311.1| alanine racemase [Bacillus cereus 03BB108]
 gi|225864057|ref|YP_002749435.1| alanine racemase [Bacillus cereus 03BB102]
 gi|196023138|gb|EDX61817.1| alanine racemase [Bacillus cereus 03BB108]
 gi|225790862|gb|ACO31079.1| alanine racemase [Bacillus cereus 03BB102]
          Length = 391

 Score = 36.3 bits (82), Expect = 7.1,   Method: Composition-based stats.
 Identities = 30/337 (8%), Positives = 84/337 (24%), Gaps = 36/337 (10%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM------DGTTSS 58
           +D   + +N+        +  + ++ A+K       A  +     +              
Sbjct: 13  VDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAIAFVD-- 70

Query: 59  SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
              E+             Y         +  +     +       L    + A +L KK 
Sbjct: 71  EAIELREAGINVPILILGYTSV---AAAEEAIQYDVMMTVYRSEDLQGINEIANRLQKKA 127

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLC 174
            +++          ++        +    ++    E   V G+   +    E        
Sbjct: 128 QIQVKID-----TGMSRIGLQEEEVKPFLEELKRMEYVEVVGMFTHYSTADEIDKSYTNM 182

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIY 230
            +++ +            I +I         +     ++  +        +  K      
Sbjct: 183 QTSLFEKAVNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVNHSV 242

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP--- 287
           +    A+   +   +      +  +       ++ E  +    +          +     
Sbjct: 243 VSLQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGHA 302

Query: 288 ----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
                   V GR C+   +  +     PV++GD + F
Sbjct: 303 LINGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 338


>gi|313803210|gb|EFS44406.1| alanine racemase [Propionibacterium acnes HL110PA2]
 gi|314963982|gb|EFT08082.1| alanine racemase [Propionibacterium acnes HL082PA1]
 gi|315081459|gb|EFT53435.1| alanine racemase [Propionibacterium acnes HL078PA1]
          Length = 375

 Score = 36.3 bits (82), Expect = 7.2,   Method: Composition-based stats.
 Identities = 38/336 (11%), Positives = 88/336 (26%), Gaps = 25/336 (7%)

Query: 3   KTPYY-LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTL-----NQYM 52
            +P + +ID + +  NL       +    K+L A+K  A    A  +   +       ++
Sbjct: 5   PSPSHAIIDLRAIAANLAVVRK--RAGDRKVLFAVKADAYGHGAVEVSRYVEKHRYADWL 62

Query: 53  DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112
              T +   E  L            + A       A+ S     + +    L      A 
Sbjct: 63  AVATVAEGQE--LVEAGITLPILKLSPADPWDMDAAITSGMRLTVVD-FDTLEAVSKAAV 119

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE--IKNVNGLMFHNNCENK 170
           +L     + I       +  L   +           +++E E    ++         E  
Sbjct: 120 RLGITARIHIAVDSGMGRIGLRPEHLAQLTAAADRTERVEVEGVFTHLPMSDVPEGEEFT 179

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY 230
                + M    + +       +  ++  G I   D           +    +       
Sbjct: 180 RHEIDAFMTAVTQTQTDRGPFPLVHLANSGAILGHDLGKTSMVRAGIVGYGYDPDPHANR 239

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA 290
            +   A+   +       ++  + I       +S    +    +          +     
Sbjct: 240 ADLHPALSWISHVTFVKTINPGDAIGYGRTWTASETTKIATVPVGYADGLSRGLSNKGHV 299

Query: 291 -------MVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319
                   + GR C+      +   +  V +GD + 
Sbjct: 300 LIGGSVHPIVGRICMDQ-FMVDLGPDSSVTVGDEVV 334


>gi|50843722|ref|YP_056949.1| alanine racemase 1 [Propionibacterium acnes KPA171202]
 gi|289424661|ref|ZP_06426444.1| alanine racemase [Propionibacterium acnes SK187]
 gi|289427468|ref|ZP_06429181.1| alanine racemase [Propionibacterium acnes J165]
 gi|295131811|ref|YP_003582474.1| alanine racemase [Propionibacterium acnes SK137]
 gi|81826355|sp|Q6A5H2|ALR_PROAC RecName: Full=Alanine racemase
 gi|50841324|gb|AAT83991.1| alanine racemase 1 [Propionibacterium acnes KPA171202]
 gi|289155358|gb|EFD04040.1| alanine racemase [Propionibacterium acnes SK187]
 gi|289159398|gb|EFD07589.1| alanine racemase [Propionibacterium acnes J165]
 gi|291376898|gb|ADE00753.1| alanine racemase [Propionibacterium acnes SK137]
 gi|313806771|gb|EFS45269.1| alanine racemase [Propionibacterium acnes HL087PA2]
 gi|313812020|gb|EFS49734.1| alanine racemase [Propionibacterium acnes HL083PA1]
 gi|313815645|gb|EFS53359.1| alanine racemase [Propionibacterium acnes HL059PA1]
 gi|313821611|gb|EFS59325.1| alanine racemase [Propionibacterium acnes HL036PA1]
 gi|313824443|gb|EFS62157.1| alanine racemase [Propionibacterium acnes HL036PA2]
 gi|313826790|gb|EFS64504.1| alanine racemase [Propionibacterium acnes HL063PA1]
 gi|313829078|gb|EFS66792.1| alanine racemase [Propionibacterium acnes HL063PA2]
 gi|313832454|gb|EFS70168.1| alanine racemase [Propionibacterium acnes HL007PA1]
 gi|314916134|gb|EFS79965.1| alanine racemase [Propionibacterium acnes HL005PA4]
 gi|314917397|gb|EFS81228.1| alanine racemase [Propionibacterium acnes HL050PA1]
 gi|314921737|gb|EFS85568.1| alanine racemase [Propionibacterium acnes HL050PA3]
 gi|314926087|gb|EFS89918.1| alanine racemase [Propionibacterium acnes HL036PA3]
 gi|314930661|gb|EFS94492.1| alanine racemase [Propionibacterium acnes HL067PA1]
 gi|314955415|gb|EFS99820.1| alanine racemase [Propionibacterium acnes HL027PA1]
 gi|314959415|gb|EFT03517.1| alanine racemase [Propionibacterium acnes HL002PA1]
 gi|314961740|gb|EFT05841.1| alanine racemase [Propionibacterium acnes HL002PA2]
 gi|314975119|gb|EFT19214.1| alanine racemase [Propionibacterium acnes HL053PA1]
 gi|314977529|gb|EFT21624.1| alanine racemase [Propionibacterium acnes HL045PA1]
 gi|314979919|gb|EFT24013.1| alanine racemase [Propionibacterium acnes HL072PA2]
 gi|314986875|gb|EFT30967.1| alanine racemase [Propionibacterium acnes HL005PA2]
 gi|315086530|gb|EFT58506.1| alanine racemase [Propionibacterium acnes HL002PA3]
 gi|315087933|gb|EFT59909.1| alanine racemase [Propionibacterium acnes HL072PA1]
 gi|315096840|gb|EFT68816.1| alanine racemase [Propionibacterium acnes HL038PA1]
 gi|315102406|gb|EFT74382.1| alanine racemase [Propionibacterium acnes HL046PA1]
 gi|315109676|gb|EFT81652.1| alanine racemase [Propionibacterium acnes HL030PA2]
 gi|327333048|gb|EGE74780.1| alanine racemase [Propionibacterium acnes HL096PA2]
 gi|327334042|gb|EGE75757.1| alanine racemase [Propionibacterium acnes HL096PA3]
 gi|327444331|gb|EGE90985.1| alanine racemase [Propionibacterium acnes HL013PA2]
 gi|327446804|gb|EGE93458.1| alanine racemase [Propionibacterium acnes HL043PA2]
 gi|327448756|gb|EGE95410.1| alanine racemase [Propionibacterium acnes HL043PA1]
 gi|327455097|gb|EGF01752.1| alanine racemase [Propionibacterium acnes HL087PA3]
 gi|327456233|gb|EGF02888.1| alanine racemase [Propionibacterium acnes HL083PA2]
 gi|328755932|gb|EGF69548.1| alanine racemase [Propionibacterium acnes HL087PA1]
 gi|328757652|gb|EGF71268.1| alanine racemase [Propionibacterium acnes HL020PA1]
 gi|328759003|gb|EGF72619.1| alanine racemase [Propionibacterium acnes HL025PA2]
 gi|328759903|gb|EGF73492.1| alanine racemase [Propionibacterium acnes HL099PA1]
 gi|332676676|gb|AEE73492.1| alanine racemase [Propionibacterium acnes 266]
          Length = 375

 Score = 36.3 bits (82), Expect = 7.3,   Method: Composition-based stats.
 Identities = 37/336 (11%), Positives = 85/336 (25%), Gaps = 25/336 (7%)

Query: 3   KTPYY-LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTL-----NQYM 52
            +P + +ID   +  NL       +    K+L A+K  A    A  +   +       ++
Sbjct: 5   PSPSHAIIDLSAIAANLAVVRK--RAGDRKVLFAVKADAYGHGAVEVSRYVEKHRYADWL 62

Query: 53  DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112
              T +   E++                    ++DA +++   +       L      A 
Sbjct: 63  AVATVAEGQELVEAGITLP---ILKLSPADPWDMDAAITSGIRLTVVDFDTLEAVSKAAV 119

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE--IKNVNGLMFHNNCENK 170
           +L     + I       +  L                 +E E    ++         E  
Sbjct: 120 RLGITAKIHIAVDSGMGRIGLRPECLAELTAAADRAKGVEVEGVFTHLPISDVPEGAEFT 179

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY 230
                + M      E       +  ++  G I   D           +    +       
Sbjct: 180 RREIDTFMTAVSLIETHRGPFPLVHLANSGAILGHDLGKTSMVRAGIVGYGYDPNPHADR 239

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA 290
            +   A+   +       + + + I       +S    +    +          +     
Sbjct: 240 ADLHPALSWISHVTFVKTVSVGDTIGYGRTWTASETTKIATVPVGYADGLSRGLSNKGHV 299

Query: 291 -------MVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319
                   + GR C+      +   +  V +GD + 
Sbjct: 300 LIRGSVHPIVGRICMDQ-FMVDLGPDSNVTVGDEVV 334


>gi|313765106|gb|EFS36470.1| alanine racemase [Propionibacterium acnes HL013PA1]
          Length = 375

 Score = 36.3 bits (82), Expect = 7.5,   Method: Composition-based stats.
 Identities = 38/341 (11%), Positives = 86/341 (25%), Gaps = 35/341 (10%)

Query: 3   KTPYY-LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTL-----NQYM 52
            +P + +ID   +  NL       +    K+L A+K  A    A  +   +       ++
Sbjct: 5   PSPSHAIIDLSAIAANLAVVRK--RAGDRKVLFAVKADAYGHGAVEVSRYVEKHRYADWL 62

Query: 53  DGTTSSSLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQ 112
              T +   E++                    ++DA +++   +       L      A 
Sbjct: 63  AVATVAEGQELVEAGITLP---ILKLSPADPWDMDAAITSGIRLTVVDFDTLEAVSKAAV 119

Query: 113 KLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL-------MFHN 165
           +L     + I          +         L E       ++   V G+           
Sbjct: 120 RLGITAKIHIAVDSG-----MGRIGLRPECLAELTAAADRAKGVEVEGVFTPLPISDVPE 174

Query: 166 NCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKY 225
             E       + M      E       +  ++  G I   D           +    +  
Sbjct: 175 GAEFTRREIDTFMTAVSLIETHRGPFPLVHLANSGAILGHDLGKTSMVRAGIVGYGYDPN 234

Query: 226 SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNT 285
                 +   A+   +       + + + I       +S    +    +          +
Sbjct: 235 PHADRADLHPALSWISHVTFVKTVSVGDTIGYGRTWTASETTKIATVPVGYADGLSRGLS 294

Query: 286 GPYTA-------MVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319
                        + GR C+      +   +  V +GD + 
Sbjct: 295 NKGHVLIRGSVHPIVGRICMDQ-FMVDLGPDSNVTVGDEVV 334


>gi|229155693|ref|ZP_04283799.1| Alanine racemase [Bacillus cereus ATCC 4342]
 gi|228627679|gb|EEK84400.1| Alanine racemase [Bacillus cereus ATCC 4342]
          Length = 408

 Score = 36.3 bits (82), Expect = 7.5,   Method: Composition-based stats.
 Identities = 37/336 (11%), Positives = 88/336 (26%), Gaps = 34/336 (10%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60
           +D   + +N+        +  + ++ A+K       A  +     +              
Sbjct: 30  VDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVDEA 89

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+             Y         +  +     +       L    + A +L KK  +
Sbjct: 90  IELREAGINVPILILGYTSV---AAAEEAIQYDVMMTVYRSEDLQGINEIANRLQKKAQI 146

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176
           ++      S+  L +            ++    E   V G+   +    E         +
Sbjct: 147 QVKIDTGMSRIGLQEEEVKPF-----LEELNRMEYVEVVGMFTHYSTADEIDKSYTNMQT 201

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
           ++ +            I +I         +     ++  +        Y  +   +    
Sbjct: 202 SLFEKAVNTAKELGIHIPYIHSSNSAGSMELSNTFQNMIRVGIGIYGMYPSKEV-DHSVV 260

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPNTGP- 287
            +    +L + V  I    KN  +   +          A +P       +  +       
Sbjct: 261 SLQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATIPIGYADGYNRQLSNKGHAL 320

Query: 288 ---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
                  V GR C+   +  +     PV++GD + F
Sbjct: 321 INGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 355


>gi|163747567|ref|ZP_02154916.1| hypothetical protein OIHEL45_16471 [Oceanibulbus indolifex
          HEL-45]
 gi|161379164|gb|EDQ03584.1| hypothetical protein OIHEL45_16471 [Oceanibulbus indolifex
          HEL-45]
          Length = 370

 Score = 36.3 bits (82), Expect = 7.5,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 31/89 (34%), Gaps = 2/89 (2%)

Query: 3  KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG-TTSSSLY 61
           TP  L+D+ ++  N+       +  GV L   LK   +  +   L     G  T S+L 
Sbjct: 8  DTPALLLDEARMQRNIARLADHAEKLGVTLRPHLKTAKSVDVARQLTGGAPGPITVSTLA 67

Query: 62 EVMLGHEKFGGETHAYNVAYKDCEIDAVL 90
          E        G     Y V     ++  V 
Sbjct: 68 EAE-VFFATGHSDILYAVGIAPQKLKRVQ 95


>gi|54295359|ref|YP_127774.1| hypothetical protein lpl2444 [Legionella pneumophila str. Lens]
 gi|53755191|emb|CAH16684.1| hypothetical protein lpl2444 [Legionella pneumophila str. Lens]
          Length = 376

 Score = 36.3 bits (82), Expect = 7.6,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 24/64 (37%), Gaps = 1/64 (1%)

Query: 2  IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
          + TP  +ID +KL  NL          G+ +    K      +     +Y   G +++ L
Sbjct: 13 LNTPCLVIDYEKLKYNLKMMQQHGFKWGIGIRPHCKTHKCTQIARLQLEYGAIGISAAKL 72

Query: 61 YEVM 64
           E  
Sbjct: 73 SEAE 76


>gi|255949208|ref|XP_002565371.1| Pc22g14470 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211592388|emb|CAP98735.1| Pc22g14470 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 217

 Score = 36.3 bits (82), Expect = 7.8,   Method: Composition-based stats.
 Identities = 9/68 (13%), Positives = 17/68 (25%), Gaps = 11/68 (16%)

Query: 3   KTPY--------YLIDKQKLLNNLDTALYIRKNAGVKLLL-ALKCFAAWGMFDTLNQYMD 53
           KTP         ++   +K++              +       KC     +   L     
Sbjct: 40  KTPCDLENDVLFFVAGTEKIVQQYQRQRNAL--PNIHPFYGHGKCPPDPKLLQLLADMDV 97

Query: 54  GTTSSSLY 61
               +SL 
Sbjct: 98  SFDCASLA 105


>gi|307611384|emb|CBX01048.1| hypothetical protein LPW_27491 [Legionella pneumophila 130b]
          Length = 376

 Score = 36.3 bits (82), Expect = 7.9,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 24/64 (37%), Gaps = 1/64 (1%)

Query: 2  IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
          + TP  +ID +KL  NL          G+ +    K      +     +Y   G +++ L
Sbjct: 13 LNTPCLVIDYEKLKYNLKMMQQHGFKWGIGIRPHCKTHKCTQIARLQLEYGAIGISAAKL 72

Query: 61 YEVM 64
           E  
Sbjct: 73 SEAE 76


>gi|52842730|ref|YP_096529.1| metal-activated pyridoxal enzyme [Legionella pneumophila subsp.
          pneumophila str. Philadelphia 1]
 gi|52629841|gb|AAU28582.1| metal-activated pyridoxal enzyme [Legionella pneumophila subsp.
          pneumophila str. Philadelphia 1]
          Length = 384

 Score = 36.3 bits (82), Expect = 7.9,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 24/64 (37%), Gaps = 1/64 (1%)

Query: 2  IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSSSL 60
          + TP  +ID +KL  NL          G+ +    K      +     +Y   G +++ L
Sbjct: 21 LNTPCLVIDYEKLKYNLKVMQQHGFEWGIGIRPHCKTHKCTQIARLQLEYGAIGISAAKL 80

Query: 61 YEVM 64
           E  
Sbjct: 81 SEAE 84


>gi|118477525|ref|YP_894676.1| alanine racemase [Bacillus thuringiensis str. Al Hakam]
 gi|228927166|ref|ZP_04090229.1| Alanine racemase [Bacillus thuringiensis serovar pondicheriensis
           BGSC 4BA1]
 gi|229091092|ref|ZP_04222315.1| Alanine racemase [Bacillus cereus Rock3-42]
 gi|229121649|ref|ZP_04250874.1| Alanine racemase [Bacillus cereus 95/8201]
 gi|229184316|ref|ZP_04311523.1| Alanine racemase [Bacillus cereus BGSC 6E1]
 gi|254720986|ref|ZP_05182777.1| alanine racemase [Bacillus anthracis str. A1055]
 gi|300118202|ref|ZP_07055950.1| alanine racemase [Bacillus cereus SJ1]
 gi|118416750|gb|ABK85169.1| alanine racemase [Bacillus thuringiensis str. Al Hakam]
 gi|228599112|gb|EEK56725.1| Alanine racemase [Bacillus cereus BGSC 6E1]
 gi|228661869|gb|EEL17484.1| Alanine racemase [Bacillus cereus 95/8201]
 gi|228692223|gb|EEL45959.1| Alanine racemase [Bacillus cereus Rock3-42]
 gi|228832492|gb|EEM78066.1| Alanine racemase [Bacillus thuringiensis serovar pondicheriensis
           BGSC 4BA1]
 gi|298724513|gb|EFI65207.1| alanine racemase [Bacillus cereus SJ1]
          Length = 408

 Score = 36.3 bits (82), Expect = 8.0,   Method: Composition-based stats.
 Identities = 32/337 (9%), Positives = 85/337 (25%), Gaps = 36/337 (10%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM------DGTTSS 58
           +D   + +N+        +  + ++ A+K       A  +     +              
Sbjct: 30  VDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAIAFVD-- 87

Query: 59  SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
              E+             Y         +  +     +       L    + A +L KK 
Sbjct: 88  EAIELREAGINVPILILGYTSV---AAAEEAIQYDVMMTVYRSEDLQGINEIANRLQKKA 144

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLC 174
            +++      S+  L +            ++    E   V G+   +    E        
Sbjct: 145 QIQVKIDTGMSRIGLQEEEVKPF-----LEELKRMEYVEVVGMFTHYSTADEIDKSYTNM 199

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIY 230
            +++ +            I +I         +     ++  +        +  K      
Sbjct: 200 QTSLFEKAVNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVNHSV 259

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP--- 287
           +    A+   +   +      +  +       ++ E  +    +          +     
Sbjct: 260 VSLQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGHA 319

Query: 288 ----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
                   V GR C+   +  +     PV++GD + F
Sbjct: 320 LINGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 355


>gi|281211349|gb|EFA85514.1| hypothetical protein PPL_01471 [Polysphondylium pallidum PN500]
          Length = 277

 Score = 36.3 bits (82), Expect = 8.1,   Method: Composition-based stats.
 Identities = 13/97 (13%), Positives = 35/97 (36%), Gaps = 2/97 (2%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDG--TTSSS 59
           + +P  ++D++ +  N    +   K  GV +   +K      +     + ++      S+
Sbjct: 9   LPSPSVVVDEEIVRRNCKKMIDRSKQLGVAIRPHMKTHKTIEIGKFQVEGLEFKKVIVST 68

Query: 60  LYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTI 96
           L E     +    +   Y +     +++   S   +I
Sbjct: 69  LQEAKFYAQSGYFKDILYAIPIAPNKLEQAASIHSSI 105


>gi|238764828|ref|ZP_04625769.1| hypothetical protein ykris0001_31020 [Yersinia kristensenii ATCC
           33638]
 gi|238696935|gb|EEP89711.1| hypothetical protein ykris0001_31020 [Yersinia kristensenii ATCC
           33638]
          Length = 392

 Score = 36.3 bits (82), Expect = 8.2,   Method: Composition-based stats.
 Identities = 33/285 (11%), Positives = 67/285 (23%), Gaps = 11/285 (3%)

Query: 7   YLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA-AWGMFDTLNQYM-DGTTSSSLYEVM 64
           Y+ID  ++  N    L      G+ L L  K F     +   L +    G  +    E  
Sbjct: 31  YVIDVDQVKQNARLLLETATRHGITLYLMSKQFGRNPLLCKILLECGYHGIVAVDFKEAR 90

Query: 65  LGHEKFGGETHAYNVAYKD--CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRI 122
             ++      H  ++         + V  + + I   +V++  +    A + + +  L +
Sbjct: 91  QLYQHNLPVAHIGHLVQIPSGMVDEVVSHHPEVITVYSVAKAREIAAAAVRQNTEQALLL 150

Query: 123 NPSVSYSKFILADPNRPF-SRLGEKCKDKIESEIKNVNG-LMFHNN-----CENKSFLCF 175
                                L    K+        + G   F                 
Sbjct: 151 KVWHHADLIYPGQEAGFSLDELPNIIKEIKTISGIRLVGVTHFPCMLFDSEKGKTLPSPN 210

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
              L   +        Q+E ++              K      +            + G 
Sbjct: 211 LNTLIEAKNILKQHGIQVEQVNGPSATSIESLPQLAKWGVTHAEPGHSLTGTMPSNQQGN 270

Query: 236 AIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT 280
                     T V    +              H+   L+Y +   
Sbjct: 271 QPEHIAMLYLTEVSHCHQGKSYCYGGGYYRRGHLSHALVYDQQWH 315


>gi|229196342|ref|ZP_04323090.1| Alanine racemase [Bacillus cereus m1293]
 gi|228587196|gb|EEK45266.1| Alanine racemase [Bacillus cereus m1293]
          Length = 408

 Score = 36.3 bits (82), Expect = 8.4,   Method: Composition-based stats.
 Identities = 37/336 (11%), Positives = 88/336 (26%), Gaps = 34/336 (10%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60
           +D   + +N+        +  + ++ A+K       A  +     +              
Sbjct: 30  VDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVDEA 89

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+             Y         +  +     +       L    + A +L KK  +
Sbjct: 90  IELREAGINVPILILGYTSV---ASAEEAIQYDVMMTVYRSEDLQGINEIANRLQKKAQI 146

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176
           ++      S+  L +            ++    E   V G+   +    E         +
Sbjct: 147 QVKIDTGMSRIGLQEEEVKPF-----LEELKRMEYVEVIGMFTHYSTADEIDKSYTNMQT 201

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
           ++ +            I +I         +     ++  +        Y  +   +    
Sbjct: 202 SLFEKAVNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEV-DHSVV 260

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPNTGP- 287
            +    +L + V  I    KN  +   +          A +P       +  +       
Sbjct: 261 SLQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATIPIGYADGYNRQLSNKGHAL 320

Query: 288 ---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
                  V GR C+   +  +     PV++GD + F
Sbjct: 321 INGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 355


>gi|257468004|ref|ZP_05632100.1| alanine racemase, biosynthetic [Fusobacterium ulcerans ATCC 49185]
 gi|317062290|ref|ZP_07926775.1| alanine racemase [Fusobacterium ulcerans ATCC 49185]
 gi|313687966|gb|EFS24801.1| alanine racemase [Fusobacterium ulcerans ATCC 49185]
          Length = 364

 Score = 36.3 bits (82), Expect = 8.6,   Method: Composition-based stats.
 Identities = 42/331 (12%), Positives = 80/331 (24%), Gaps = 29/331 (8%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMD-GTTSSSLYEV 63
           ID   L  NL+    + +   V  +  +K  +    A      L++        +SL E 
Sbjct: 7   IDMDNLKYNLNKIKELVQGTNVLGV--IKANSYGFGAIETAKELSKNGVEIFGVASLEEA 64

Query: 64  MLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRIN 123
           M   E    E      +  + EI+        I  +++ Q+   +         I +   
Sbjct: 65  MELREGGIEEEILILGSLFNDEIEIAAEKNFQITISSMRQIEFLESNKINAEIHIKIDTG 124

Query: 124 PSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLKNIE 183
                               G+K  D    +     G+  H +  +          K   
Sbjct: 125 MGRLGFTPEK----------GKKAVDYCIEKGIKAVGIYSHLSDADGMSDEAYNYTKEQI 174

Query: 184 KEFG--HFITQIEWISLGGGIHFTDKDYPVKDF-CQRLKEFSEKYSVQIYLEPGEAIVTN 240
            +F        I++I +         +   K    +           +            
Sbjct: 175 NKFKIFEEYKNIKYIHILNSGGILRFNDGFKGNLVRAGICMYGMLGNERMPGFKRVFTMK 234

Query: 241 TTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP-------YTAMVC 293
           T  L    L+    I     V            +          +             + 
Sbjct: 235 TRILFIRTLEEDSYISYGRTVKLKEGETFATLAIGYADGMKKEFSNKTYALIEGEKCPIV 294

Query: 294 GRSCLAGDIF-GEFHFEKPVKIG-DRISFED 322
           G  C+   +        K + IG + I   D
Sbjct: 295 GEICMDMCMVKIPESILKKINIGTEAIVIRD 325


>gi|47566849|ref|ZP_00237567.1| alanine racemase [Bacillus cereus G9241]
 gi|47556478|gb|EAL14811.1| alanine racemase [Bacillus cereus G9241]
          Length = 391

 Score = 36.3 bits (82), Expect = 8.6,   Method: Composition-based stats.
 Identities = 37/336 (11%), Positives = 88/336 (26%), Gaps = 34/336 (10%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM----DGTTSSSL 60
           +D   + +N+        +  + ++ A+K       A  +     +              
Sbjct: 13  VDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVDEA 72

Query: 61  YEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
            E+             Y         +  +     +       L    + A +L KK  +
Sbjct: 73  IELREAGINVPILILGYTSV---AAAEEAIQYDVMMTVYRSEDLQGINEIANRLQKKAQI 129

Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLCFS 176
           ++      S+  L +            ++    E   V G+   +    E         +
Sbjct: 130 QVKIDTGMSRIGLQEEEVKPF-----LEELNRMEYVEVVGMFTHYSTADEIDKSYTNMQT 184

Query: 177 AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEA 236
           ++ +            I +I         +     ++  +        Y  +   +    
Sbjct: 185 SLFEKAVNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEV-DHSVV 243

Query: 237 IVTNTTTLNTTVLDISENIKNLVIVDSSVE--------AHVPDYLLYQESATIYPNTGP- 287
            +    +L + V  I    KN  +   +          A +P       +  +       
Sbjct: 244 SLQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATIPIGYADGYNRQLSNKGHAL 303

Query: 288 ---YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
                  V GR C+   +  +     PV++GD + F
Sbjct: 304 INGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 338


>gi|238507479|ref|XP_002384941.1| monoxygenase, putative [Aspergillus flavus NRRL3357]
 gi|220689654|gb|EED46005.1| monoxygenase, putative [Aspergillus flavus NRRL3357]
          Length = 229

 Score = 36.3 bits (82), Expect = 8.8,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 17/55 (30%), Gaps = 2/55 (3%)

Query: 280 TIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWF 334
                  PY   V G+ CL GD             G  ++FED     +     F
Sbjct: 103 WRLYRHEPYPYWVKGKVCLLGD--AAHPMMPDQSQGSCMAFEDAGALGLVFHRTF 155


>gi|228914698|ref|ZP_04078307.1| Alanine racemase [Bacillus thuringiensis serovar pulsiensis BGSC
           4CC1]
 gi|228845017|gb|EEM90059.1| Alanine racemase [Bacillus thuringiensis serovar pulsiensis BGSC
           4CC1]
          Length = 408

 Score = 36.3 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 32/337 (9%), Positives = 85/337 (25%), Gaps = 36/337 (10%)

Query: 9   IDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM------DGTTSS 58
           +D   + +N+        +  + ++ A+K       A  +     +              
Sbjct: 30  VDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAIAFVD-- 87

Query: 59  SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKI 118
              E+             Y         +  +     +       L    + A +L KK 
Sbjct: 88  EAIELREAGINVPILILGYTSV---AAAEEAIQYDVMMTVYRSEDLQGINEIANRLQKKA 144

Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGL--MFHNNCENK--SFLC 174
            +++      S+  L +            ++    E   V G+   +    E        
Sbjct: 145 QIQVKIDTGMSRIGLQEEEVKPF-----LEELKRMEYVEVVGMFTHYSTADEIDKSYTNM 199

Query: 175 FSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQ----RLKEFSEKYSVQIY 230
            +++ +            I +I         +     ++  +        +  K      
Sbjct: 200 QTSLFEKAVNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVNHSV 259

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGP--- 287
           +    A+   +   +      +  +       ++ E  +    +          +     
Sbjct: 260 VSLQPALSLKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSNKGHA 319

Query: 288 ----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISF 320
                   V GR C+   +  +     PV++GD + F
Sbjct: 320 LINGVRVPVIGRVCMDQ-LMLDVSKAMPVQVGDEVVF 355


>gi|163797903|ref|ZP_02191846.1| alanine racemase-like protein [alpha proteobacterium BAL199]
 gi|159176778|gb|EDP61348.1| alanine racemase-like protein [alpha proteobacterium BAL199]
          Length = 353

 Score = 35.9 bits (81), Expect = 9.4,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 45/214 (21%), Gaps = 12/214 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMD-GTTSS-- 58
           I TP  L+D      N+D         G +    +K      +     +    G T    
Sbjct: 7   IDTPAVLVDLDVAEANIDRFQDYCNLHGFRNRPHIKTHKLPVLARRQIKVGAVGVTCQKI 66

Query: 59  SLYEVMLGHEKFGGETHAYNVAYKDCEIDAVL-SNCDTIIFNTVSQLNKFKDKAQKLHKK 117
           S  E M+           YNV            +   T+     S         +     
Sbjct: 67  SEAEAMIAEGGVDDVLLTYNVVGSAKLQRLHALAGRVTLSVVADSAAVVAGLGTEFAGAS 126

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDK--IESEIKNVNGLMFHNNCENKSFLCF 175
             L +               R         +D   I      V            S    
Sbjct: 127 QPLSVLVECDTGAH------RCGVATPTAARDLATIIDRTDGVRFGGLMTYPPVGSTGAV 180

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDY 209
              +    +        +E I+ GG         
Sbjct: 181 QGFMSEAIELCEAAGLTVERITSGGAPDMWRAHE 214


>gi|312081500|ref|XP_003143054.1| multiple epidermal growth factor-like domains 6 [Loa loa]
 gi|307761784|gb|EFO21018.1| multiple epidermal growth factor-like domains 6 [Loa loa]
          Length = 956

 Score = 35.9 bits (81), Expect = 9.5,   Method: Composition-based stats.
 Identities = 25/247 (10%), Positives = 47/247 (19%), Gaps = 4/247 (1%)

Query: 53  DGTTSSSLYEVMLGHEKFGGET--HAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDK 110
            G   +S Y  ++  ++    T       A +           +    +     +     
Sbjct: 387 SGCECASGYTGIVCEDRCPEGTWGLGCKKACECNGQICNHITGECDCPDGAECEDSCPAG 446

Query: 111 AQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENK 170
                  +  ++  S           + P    GEKC           N      NCE +
Sbjct: 447 FYGPSCNLPCQMTCSSGRCDRKYGYCSCPAGYYGEKCDQICPRFNYGRNCRHV-CNCEIE 505

Query: 171 SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIY 230
                         + G +    +     G    +          Q     S     +  
Sbjct: 506 YSEGCDPKTGKCICKSGFYGPFCKRRCPVGFYGQSCTKKCWCAENQECDSISGDCIKKCR 565

Query: 231 LEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTA 290
                                           S V  HV      +              
Sbjct: 566 PGYTGDQCQIPCPAGM-YGYNCTQKCACEAGASQVCHHVTGTCTCRPGYYGVLCEKMCPT 624

Query: 291 MVCGRSC 297
            + G +C
Sbjct: 625 GLYGPNC 631


>gi|107024350|ref|YP_622677.1| carotenoid oxygenase [Burkholderia cenocepacia AU 1054]
 gi|116688324|ref|YP_833947.1| carotenoid oxygenase [Burkholderia cenocepacia HI2424]
 gi|105894539|gb|ABF77704.1| Carotenoid oxygenase [Burkholderia cenocepacia AU 1054]
 gi|116646413|gb|ABK07054.1| Carotenoid oxygenase [Burkholderia cenocepacia HI2424]
          Length = 445

 Score = 35.9 bits (81), Expect = 9.7,   Method: Composition-based stats.
 Identities = 18/217 (8%), Positives = 42/217 (19%), Gaps = 13/217 (5%)

Query: 38  CFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFG-GETHAYNVAYKDCEIDAVLSNCDTI 96
                 +     + +      +   +    + FG    HA                 + I
Sbjct: 102 TNPNVNVLQHAGELLALAEGGAPLAITAALDSFGVPARHAGFDGAMTAHPKVDPVTGELI 161

Query: 97  IFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIK 156
           +F    +    +           + +   +     +          L             
Sbjct: 162 LFRADWRAPWLRYGVIDAMGVKRIDVEIELGAPSMMHDLAITETRSLLLDLN-------- 213

Query: 157 NVNGLMFHNNCE-NKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGI-HFTDKDYPVKDF 214
              G  F    + ++  L +                 + W  +           Y     
Sbjct: 214 --VGYDFSLLKQGHRMPLRWHDDRPARIGVLPRHGGDVRWFGVEPCFIQHVVNAYDCDAS 271

Query: 215 CQRLKEFSEKYSVQIYLEPGEAIVTNTTTLNTTVLDI 251
           C  L        +++    G         L   V+D 
Sbjct: 272 CIVLDAVRYPSFLRLDTRTGRFADNPVGELWRYVIDT 308


>gi|99082592|ref|YP_614746.1| alanine racemase-like [Ruegeria sp. TM1040]
 gi|99038872|gb|ABF65484.1| alanine racemase-like protein [Ruegeria sp. TM1040]
          Length = 351

 Score = 35.9 bits (81), Expect = 9.7,   Method: Composition-based stats.
 Identities = 23/257 (8%), Positives = 59/257 (22%), Gaps = 13/257 (5%)

Query: 2   IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDT-LNQYMDGTTSSSL 60
           I TP  L+D      N+           +K+   +K      + +  + Q   G T   +
Sbjct: 5   IDTPAVLVDLNVAEANVRAFQSYCDRHSLKMRPHIKTHKLPQLAEYQIAQGAIGITCQKI 64

Query: 61  YEVMLGHEKFGGETHAYNVA-----YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLH 115
            E                                     +++ + ++ +          +
Sbjct: 65  TEAEAMVAGGDMRDILITYNILGAEKVARLRALSERVALSVVADNLTVVEGLSAGFAGAN 124

Query: 116 KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCF 175
           K + + +  +    +  +                 I++    +                 
Sbjct: 125 KPLPVLVECNTGADRCGV-----ETPEAALALAQAIDAA-PGLKFAGLMTYPPVGGAAKV 178

Query: 176 SAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235
           +  L   +         +E IS GG      + + +    +            +      
Sbjct: 179 TTWLAEAKARIEATDLTVEVISSGGS-PDMWQAHEMPLATEYRVGTYVYNDRSLVTRGIC 237

Query: 236 AIVTNTTTLNTTVLDIS 252
                  T+  TV+   
Sbjct: 238 TWDDCALTVLATVVSTP 254


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.314    0.127    0.347 

Lambda     K      H
   0.267   0.0390    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,467,032,367
Number of Sequences: 14124377
Number of extensions: 128049914
Number of successful extensions: 352735
Number of sequences better than 10.0: 6041
Number of HSP's better than 10.0 without gapping: 4512
Number of HSP's successfully gapped in prelim test: 1529
Number of HSP's that attempted gapping in prelim test: 336320
Number of HSP's gapped (non-prelim): 7002
length of query: 367
length of database: 4,842,793,630
effective HSP length: 140
effective length of query: 227
effective length of database: 2,865,380,850
effective search space: 650441452950
effective search space used: 650441452950
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 82 (36.3 bits)